Query 004994
Match_columns 720
No_of_seqs 621 out of 5252
Neff 9.1
Searched_HMMs 46136
Date Thu Mar 28 16:19:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004994.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/004994hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 1E-61 2.2E-66 588.7 41.6 537 72-719 405-951 (968)
2 KOG1187 Serine/threonine prote 100.0 9E-56 2E-60 468.2 27.2 287 426-719 61-352 (361)
3 KOG0581 Mitogen-activated prot 100.0 4.4E-48 9.5E-53 385.7 18.8 250 443-715 82-335 (364)
4 KOG0192 Tyrosine kinase specif 100.0 2.4E-47 5.3E-52 400.7 22.9 252 445-719 46-303 (362)
5 KOG0615 Serine/threonine prote 100.0 6.6E-46 1.4E-50 372.0 15.4 253 438-715 170-437 (475)
6 KOG0197 Tyrosine kinases [Sign 100.0 2.5E-45 5.4E-50 383.1 19.2 249 445-719 211-461 (468)
7 KOG0575 Polo-like serine/threo 100.0 1.6E-44 3.4E-49 380.3 20.6 249 440-715 18-269 (592)
8 KOG0593 Predicted protein kina 100.0 2.1E-45 4.5E-50 354.1 12.6 266 440-715 2-284 (396)
9 KOG0595 Serine/threonine-prote 100.0 1.3E-44 2.9E-49 363.4 19.0 203 439-651 9-219 (429)
10 KOG0591 NIMA (never in mitosis 100.0 1.5E-45 3.2E-50 351.7 8.1 259 441-717 20-283 (375)
11 KOG0600 Cdc2-related protein k 100.0 1.2E-43 2.6E-48 364.3 16.2 267 439-714 116-399 (560)
12 KOG0659 Cdk activating kinase 100.0 5.8E-43 1.3E-47 332.0 17.3 266 440-715 2-281 (318)
13 KOG1094 Discoidin domain recep 100.0 6.3E-42 1.4E-46 355.2 24.4 265 439-719 537-804 (807)
14 KOG0598 Ribosomal protein S6 k 100.0 7.7E-43 1.7E-47 348.2 16.9 242 440-707 25-269 (357)
15 KOG1026 Nerve growth factor re 100.0 3.9E-43 8.4E-48 383.8 15.1 256 443-719 489-762 (774)
16 KOG0661 MAPK related serine/th 100.0 1.2E-43 2.6E-48 361.7 10.2 267 438-715 8-291 (538)
17 KOG0592 3-phosphoinositide-dep 100.0 5.4E-42 1.2E-46 355.0 20.7 252 437-715 70-338 (604)
18 KOG0193 Serine/threonine prote 100.0 6.2E-42 1.4E-46 358.5 19.9 266 433-720 385-654 (678)
19 cd05102 PTKc_VEGFR3 Catalytic 100.0 3.6E-41 7.8E-46 360.3 22.1 262 439-720 6-335 (338)
20 KOG0198 MEKK and related serin 100.0 1.6E-41 3.4E-46 345.8 17.2 254 440-716 17-277 (313)
21 KOG0578 p21-activated serine/t 100.0 1.4E-41 3E-46 355.4 16.3 248 440-715 273-523 (550)
22 KOG0582 Ste20-like serine/thre 100.0 8.8E-41 1.9E-45 338.2 20.8 263 439-715 25-293 (516)
23 KOG1095 Protein tyrosine kinas 100.0 7.5E-41 1.6E-45 378.9 17.6 259 441-720 693-962 (1025)
24 KOG0663 Protein kinase PITSLRE 100.0 8E-41 1.7E-45 326.7 15.0 267 440-715 76-361 (419)
25 KOG0660 Mitogen-activated prot 100.0 9.9E-41 2.2E-45 331.7 14.7 268 439-715 21-310 (359)
26 KOG0597 Serine-threonine prote 100.0 6E-41 1.3E-45 346.8 13.5 248 440-715 2-251 (808)
27 PHA02988 hypothetical protein; 100.0 1.5E-39 3.2E-44 338.5 24.2 247 445-719 25-279 (283)
28 cd05104 PTKc_Kit Catalytic dom 100.0 6E-40 1.3E-44 355.1 21.9 262 439-720 34-375 (375)
29 KOG0196 Tyrosine kinase, EPH ( 100.0 5.5E-41 1.2E-45 359.0 12.4 254 443-720 632-892 (996)
30 cd05106 PTKc_CSF-1R Catalytic 100.0 7.5E-40 1.6E-44 354.0 20.5 261 440-720 38-373 (374)
31 KOG0194 Protein tyrosine kinas 100.0 3.7E-40 8E-45 350.2 16.9 254 441-719 158-420 (474)
32 KOG0583 Serine/threonine prote 100.0 1.9E-39 4.1E-44 344.4 22.3 251 438-715 15-275 (370)
33 cd05096 PTKc_DDR1 Catalytic do 100.0 1.6E-39 3.5E-44 342.3 21.3 265 440-718 5-304 (304)
34 KOG0588 Serine/threonine prote 100.0 4.7E-40 1E-44 347.2 16.8 249 440-716 12-264 (786)
35 KOG0616 cAMP-dependent protein 100.0 9.7E-40 2.1E-44 314.6 16.4 237 440-706 44-283 (355)
36 KOG4721 Serine/threonine prote 100.0 2.1E-40 4.5E-45 342.4 12.6 238 444-717 128-366 (904)
37 KOG0585 Ca2+/calmodulin-depend 100.0 9.3E-40 2E-44 332.7 16.6 257 437-716 94-373 (576)
38 KOG0605 NDR and related serine 100.0 1.6E-39 3.4E-44 337.2 17.6 253 439-714 140-444 (550)
39 KOG0658 Glycogen synthase kina 100.0 1.8E-40 4E-45 330.4 10.0 261 441-715 25-306 (364)
40 KOG0201 Serine/threonine prote 100.0 1.3E-40 2.8E-45 337.2 8.8 248 441-715 14-263 (467)
41 cd07848 STKc_CDKL5 Catalytic d 100.0 3.6E-39 7.7E-44 336.7 19.7 268 440-715 1-284 (287)
42 cd06649 PKc_MEK2 Catalytic dom 100.0 9.1E-39 2E-43 340.5 22.4 267 439-716 4-302 (331)
43 cd05631 STKc_GRK4 Catalytic do 100.0 6.5E-39 1.4E-43 334.3 20.3 252 442-715 2-261 (285)
44 cd05048 PTKc_Ror Catalytic Dom 100.0 1.5E-38 3.3E-43 331.2 22.6 259 440-719 5-283 (283)
45 PLN00034 mitogen-activated pro 100.0 3.3E-38 7.2E-43 339.3 25.2 247 441-715 75-328 (353)
46 cd05105 PTKc_PDGFR_alpha Catal 100.0 1.7E-38 3.8E-43 344.8 23.2 262 439-720 36-398 (400)
47 cd05064 PTKc_EphR_A10 Catalyti 100.0 1.8E-38 4E-43 327.5 22.2 256 440-720 5-266 (266)
48 KOG0580 Serine/threonine prote 100.0 1.8E-39 3.8E-44 304.1 12.3 251 439-716 21-274 (281)
49 cd05054 PTKc_VEGFR Catalytic d 100.0 1.4E-38 3E-43 339.4 21.1 261 440-720 7-334 (337)
50 cd05033 PTKc_EphR Catalytic do 100.0 4.3E-38 9.3E-43 324.7 23.7 257 440-720 4-266 (266)
51 cd05612 STKc_PRKX_like Catalyt 100.0 5.7E-39 1.2E-43 335.8 17.4 246 440-715 1-254 (291)
52 cd05571 STKc_PKB Catalytic dom 100.0 9.7E-39 2.1E-43 339.1 19.1 243 446-715 1-251 (323)
53 cd05068 PTKc_Frk_like Catalyti 100.0 5.9E-38 1.3E-42 322.7 23.2 255 439-719 5-261 (261)
54 cd05075 PTKc_Axl Catalytic dom 100.0 6.4E-38 1.4E-42 324.4 23.5 258 443-720 2-272 (272)
55 cd05108 PTKc_EGFR Catalytic do 100.0 3.7E-38 8E-43 333.7 22.1 255 440-719 7-268 (316)
56 cd05035 PTKc_Axl_like Catalyti 100.0 8.4E-38 1.8E-42 323.5 23.9 259 442-720 1-273 (273)
57 cd07871 STKc_PCTAIRE3 Catalyti 100.0 3E-38 6.4E-43 329.9 20.4 266 440-715 5-285 (288)
58 cd05062 PTKc_IGF-1R Catalytic 100.0 5.3E-38 1.1E-42 326.1 21.9 260 438-718 4-277 (277)
59 PTZ00283 serine/threonine prot 100.0 1.6E-38 3.4E-43 354.5 19.2 258 438-715 30-297 (496)
60 PTZ00263 protein kinase A cata 100.0 1.2E-38 2.7E-43 339.1 17.4 246 440-715 18-271 (329)
61 cd05045 PTKc_RET Catalytic dom 100.0 8.1E-38 1.8E-42 327.0 23.0 259 441-720 1-287 (290)
62 KOG0599 Phosphorylase kinase g 100.0 3.8E-39 8.2E-44 306.1 11.5 256 434-715 11-283 (411)
63 cd05052 PTKc_Abl Catalytic dom 100.0 7.7E-38 1.7E-42 322.3 22.3 254 441-720 7-263 (263)
64 cd05072 PTKc_Lyn Catalytic dom 100.0 6.7E-38 1.5E-42 322.2 21.9 254 440-719 6-261 (261)
65 cd08228 STKc_Nek6 Catalytic do 100.0 1.2E-37 2.6E-42 321.4 23.6 261 440-719 2-265 (267)
66 KOG0694 Serine/threonine prote 100.0 2.4E-38 5.1E-43 337.3 18.7 243 439-709 367-613 (694)
67 cd05114 PTKc_Tec_Rlk Catalytic 100.0 1E-37 2.2E-42 320.0 22.6 250 440-716 4-255 (256)
68 cd07859 STKc_TDY_MAPK_plant Ca 100.0 3E-38 6.6E-43 337.8 19.4 266 441-715 1-290 (338)
69 cd05053 PTKc_FGFR Catalytic do 100.0 5.5E-38 1.2E-42 328.7 20.8 261 439-720 11-292 (293)
70 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 2E-38 4.2E-43 338.4 17.6 253 440-715 1-257 (333)
71 cd06650 PKc_MEK1 Catalytic dom 100.0 7.2E-38 1.6E-42 333.7 21.8 266 439-715 4-299 (333)
72 KOG2345 Serine/threonine prote 100.0 3.7E-39 8E-44 303.2 10.4 265 438-720 19-301 (302)
73 PF07714 Pkinase_Tyr: Protein 100.0 1.1E-38 2.5E-43 327.6 15.0 249 445-716 4-259 (259)
74 cd05084 PTKc_Fes Catalytic dom 100.0 1.4E-37 3E-42 318.1 23.0 249 446-718 1-252 (252)
75 cd05111 PTK_HER3 Pseudokinase 100.0 1.4E-37 3.1E-42 323.1 23.3 255 440-719 7-268 (279)
76 cd07862 STKc_CDK6 Catalytic do 100.0 7.2E-38 1.6E-42 327.3 21.1 267 440-715 1-287 (290)
77 cd05593 STKc_PKB_gamma Catalyt 100.0 5.6E-38 1.2E-42 333.7 20.5 243 446-715 1-251 (328)
78 cd05107 PTKc_PDGFR_beta Cataly 100.0 7.6E-38 1.7E-42 339.6 21.7 261 440-720 37-400 (401)
79 cd05595 STKc_PKB_beta Catalyti 100.0 5.7E-38 1.2E-42 333.1 20.3 243 446-715 1-251 (323)
80 cd05049 PTKc_Trk Catalytic dom 100.0 8.7E-38 1.9E-42 324.9 21.1 258 440-718 5-280 (280)
81 KOG4278 Protein tyrosine kinas 100.0 1E-38 2.2E-43 332.2 13.9 257 438-720 265-524 (1157)
82 PTZ00267 NIMA-related protein 100.0 5.9E-38 1.3E-42 349.8 21.1 252 442-715 69-323 (478)
83 KOG0594 Protein kinase PCTAIRE 100.0 4.1E-38 8.9E-43 314.6 17.5 269 441-715 12-302 (323)
84 cd05093 PTKc_TrkB Catalytic do 100.0 1.3E-37 2.8E-42 325.1 22.1 258 440-719 5-279 (288)
85 cd05090 PTKc_Ror1 Catalytic do 100.0 1.5E-37 3.2E-42 323.8 22.4 258 440-718 5-282 (283)
86 KOG1989 ARK protein kinase fam 100.0 3.5E-38 7.7E-43 346.8 17.9 254 441-719 38-311 (738)
87 cd05585 STKc_YPK1_like Catalyt 100.0 6.8E-38 1.5E-42 331.0 19.3 241 448-715 1-247 (312)
88 cd05094 PTKc_TrkC Catalytic do 100.0 2.1E-37 4.5E-42 324.1 22.6 258 440-719 5-282 (291)
89 PTZ00426 cAMP-dependent protei 100.0 4.5E-38 9.8E-43 335.6 17.8 246 440-715 30-284 (340)
90 cd05036 PTKc_ALK_LTK Catalytic 100.0 1.8E-37 3.9E-42 322.1 21.9 259 439-718 5-277 (277)
91 cd05055 PTKc_PDGFR Catalytic d 100.0 2.1E-37 4.6E-42 325.6 22.3 259 440-720 35-302 (302)
92 cd05608 STKc_GRK1 Catalytic do 100.0 1.5E-37 3.3E-42 323.2 20.9 249 448-715 1-257 (280)
93 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 5.6E-37 1.2E-41 316.3 24.9 261 440-719 2-265 (267)
94 cd05059 PTKc_Tec_like Catalyti 100.0 2.3E-37 4.9E-42 317.4 21.8 250 441-717 5-256 (256)
95 cd05113 PTKc_Btk_Bmx Catalytic 100.0 2.1E-37 4.6E-42 317.6 21.2 250 441-717 5-256 (256)
96 cd05043 PTK_Ryk Pseudokinase d 100.0 2.6E-37 5.5E-42 321.4 22.0 260 439-719 5-276 (280)
97 cd08229 STKc_Nek7 Catalytic do 100.0 2.3E-37 5E-42 319.3 21.2 261 440-719 2-265 (267)
98 cd05098 PTKc_FGFR1 Catalytic d 100.0 2.1E-37 4.5E-42 326.6 21.3 260 440-720 18-300 (307)
99 KOG0611 Predicted serine/threo 100.0 2.9E-38 6.4E-43 314.6 13.8 249 439-716 52-304 (668)
100 KOG0589 Serine/threonine prote 100.0 3.7E-38 8.1E-43 328.5 15.2 252 440-715 4-258 (426)
101 KOG0033 Ca2+/calmodulin-depend 100.0 2.1E-39 4.5E-44 303.5 5.2 252 438-715 9-267 (355)
102 cd05584 STKc_p70S6K Catalytic 100.0 1.8E-37 3.8E-42 329.4 20.5 243 446-715 2-256 (323)
103 cd05091 PTKc_Ror2 Catalytic do 100.0 1.8E-37 3.8E-42 323.2 20.1 256 442-718 7-282 (283)
104 cd05594 STKc_PKB_alpha Catalyt 100.0 6.7E-38 1.5E-42 333.0 17.2 244 446-715 1-252 (325)
105 cd05116 PTKc_Syk Catalytic dom 100.0 5.2E-37 1.1E-41 314.9 23.0 248 447-719 2-255 (257)
106 cd05101 PTKc_FGFR2 Catalytic d 100.0 3.2E-37 7E-42 324.7 21.9 261 439-720 14-297 (304)
107 cd07869 STKc_PFTAIRE1 Catalyti 100.0 3.5E-37 7.5E-42 324.3 21.9 267 439-715 4-288 (303)
108 cd05089 PTKc_Tie1 Catalytic do 100.0 4E-37 8.6E-42 322.9 22.3 257 440-720 2-276 (297)
109 cd05148 PTKc_Srm_Brk Catalytic 100.0 2E-37 4.3E-42 318.6 19.2 255 439-719 5-261 (261)
110 cd05061 PTKc_InsR Catalytic do 100.0 5.4E-37 1.2E-41 320.4 22.5 260 439-719 5-278 (288)
111 cd05097 PTKc_DDR_like Catalyti 100.0 2.8E-37 6.1E-42 323.7 20.4 265 440-718 5-295 (295)
112 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 6.5E-37 1.4E-41 318.9 22.9 267 442-719 6-281 (283)
113 PTZ00284 protein kinase; Provi 100.0 1.4E-36 3E-41 338.6 26.9 268 433-715 122-438 (467)
114 cd05573 STKc_ROCK_NDR_like Cat 100.0 6.9E-38 1.5E-42 336.7 15.9 253 440-715 1-285 (350)
115 cd05063 PTKc_EphR_A2 Catalytic 100.0 7.6E-37 1.6E-41 315.7 23.0 257 440-720 5-268 (268)
116 cd05051 PTKc_DDR Catalytic dom 100.0 4.3E-37 9.3E-42 322.4 21.2 266 439-718 4-296 (296)
117 PTZ00036 glycogen synthase kin 100.0 1E-37 2.3E-42 343.8 17.4 263 439-715 65-351 (440)
118 cd08529 STKc_FA2-like Catalyti 100.0 7E-37 1.5E-41 313.5 22.2 251 441-715 1-253 (256)
119 cd05626 STKc_LATS2 Catalytic d 100.0 2.4E-37 5.3E-42 335.9 19.9 253 441-715 2-305 (381)
120 cd05103 PTKc_VEGFR2 Catalytic 100.0 3.4E-37 7.4E-42 329.9 20.7 261 440-720 7-340 (343)
121 cd05109 PTKc_HER2 Catalytic do 100.0 7.6E-37 1.6E-41 317.7 22.6 255 440-719 7-268 (279)
122 cd05589 STKc_PKN Catalytic dom 100.0 3.1E-37 6.8E-42 327.7 20.0 246 442-715 1-257 (324)
123 cd05032 PTKc_InsR_like Catalyt 100.0 4.9E-37 1.1E-41 318.7 21.0 259 439-718 5-277 (277)
124 cd05095 PTKc_DDR2 Catalytic do 100.0 5.9E-37 1.3E-41 321.4 21.7 265 440-718 5-296 (296)
125 cd05071 PTKc_Src Catalytic dom 100.0 1.1E-36 2.4E-41 313.5 23.3 253 440-719 6-260 (262)
126 PHA03212 serine/threonine kina 100.0 3.9E-37 8.5E-42 334.0 20.9 260 439-715 91-376 (391)
127 cd05605 STKc_GRK4_like Catalyt 100.0 3E-37 6.4E-42 321.8 19.3 253 441-715 1-261 (285)
128 cd06625 STKc_MEKK3_like Cataly 100.0 1.3E-36 2.8E-41 313.0 23.7 253 440-715 2-260 (263)
129 cd05592 STKc_nPKC_theta_delta 100.0 3.5E-37 7.6E-42 326.0 20.0 242 446-714 1-247 (316)
130 KOG0610 Putative serine/threon 100.0 3E-37 6.5E-42 310.4 18.1 253 442-715 79-392 (459)
131 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 1.2E-36 2.6E-41 312.8 23.2 252 440-718 6-259 (260)
132 cd05590 STKc_nPKC_eta Catalyti 100.0 3E-37 6.5E-42 327.1 19.0 243 446-715 1-253 (320)
133 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 1.6E-36 3.4E-41 313.6 23.9 255 446-717 1-268 (269)
134 cd05088 PTKc_Tie2 Catalytic do 100.0 5.8E-37 1.3E-41 322.5 21.0 257 440-720 7-281 (303)
135 cd05050 PTKc_Musk Catalytic do 100.0 8.1E-37 1.8E-41 319.1 21.7 259 439-718 4-288 (288)
136 cd05591 STKc_nPKC_epsilon Cata 100.0 3.4E-37 7.3E-42 327.0 18.9 243 446-715 1-254 (321)
137 cd05614 STKc_MSK2_N N-terminal 100.0 2.8E-37 6E-42 329.4 18.3 253 441-715 1-267 (332)
138 cd05619 STKc_nPKC_theta Cataly 100.0 4.9E-37 1.1E-41 324.7 20.0 242 446-714 1-247 (316)
139 cd05599 STKc_NDR_like Catalyti 100.0 1.6E-37 3.4E-42 335.7 16.5 253 440-715 1-296 (364)
140 KOG0574 STE20-like serine/thre 100.0 7.1E-39 1.5E-43 307.8 5.2 247 442-715 35-283 (502)
141 cd05582 STKc_RSK_N N-terminal 100.0 1.4E-37 3.1E-42 329.5 15.7 239 446-711 2-245 (318)
142 cd05629 STKc_NDR_like_fungal C 100.0 2.5E-37 5.5E-42 335.5 17.8 253 440-715 1-305 (377)
143 cd05067 PTKc_Lck_Blk Catalytic 100.0 1.3E-36 2.8E-41 312.6 22.2 253 439-718 5-259 (260)
144 cd05601 STKc_CRIK Catalytic do 100.0 1.3E-37 2.9E-42 331.6 15.3 254 440-715 1-263 (330)
145 cd05587 STKc_cPKC Catalytic do 100.0 5.5E-37 1.2E-41 325.8 20.0 248 441-715 1-257 (324)
146 cd05618 STKc_aPKC_iota Catalyt 100.0 5.4E-37 1.2E-41 326.4 19.9 250 446-715 1-262 (329)
147 cd05596 STKc_ROCK Catalytic do 100.0 1.9E-37 4.1E-42 335.0 16.6 253 438-715 41-304 (370)
148 cd05628 STKc_NDR1 Catalytic do 100.0 5.1E-37 1.1E-41 331.2 20.0 254 440-715 1-293 (363)
149 cd05115 PTKc_Zap-70 Catalytic 100.0 2.1E-36 4.5E-41 310.5 23.5 247 448-719 3-255 (257)
150 cd05085 PTKc_Fer Catalytic dom 100.0 1.9E-36 4.1E-41 309.3 23.1 247 446-717 1-249 (250)
151 cd07853 STKc_NLK Catalytic dom 100.0 7.1E-37 1.5E-41 331.4 20.9 265 441-715 1-288 (372)
152 cd05620 STKc_nPKC_delta Cataly 100.0 5.7E-37 1.2E-41 324.3 19.6 242 446-714 1-247 (316)
153 cd05607 STKc_GRK7 Catalytic do 100.0 1E-36 2.2E-41 316.4 21.1 248 448-716 1-251 (277)
154 cd06646 STKc_MAP4K5 Catalytic 100.0 1.1E-36 2.4E-41 314.3 21.1 254 439-716 8-266 (267)
155 PRK13184 pknD serine/threonine 100.0 8.1E-37 1.8E-41 349.1 22.0 262 440-719 2-290 (932)
156 cd05588 STKc_aPKC Catalytic do 100.0 7.5E-37 1.6E-41 325.4 20.3 250 446-715 1-262 (329)
157 cd05616 STKc_cPKC_beta Catalyt 100.0 6.2E-37 1.4E-41 325.3 19.6 247 441-714 1-256 (323)
158 cd05621 STKc_ROCK2 Catalytic d 100.0 3.5E-37 7.7E-42 332.5 17.9 254 437-715 40-304 (370)
159 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 2.1E-36 4.6E-41 315.2 23.1 268 440-719 4-283 (284)
160 cd05069 PTKc_Yes Catalytic dom 100.0 2.7E-36 5.8E-41 310.2 23.4 252 440-718 6-259 (260)
161 cd05065 PTKc_EphR_B Catalytic 100.0 1.6E-36 3.5E-41 313.4 21.8 256 441-720 5-269 (269)
162 cd05039 PTKc_Csk_like Catalyti 100.0 2.9E-36 6.3E-41 309.1 23.5 249 440-719 6-256 (256)
163 cd05040 PTKc_Ack_like Catalyti 100.0 1.8E-36 4E-41 310.7 22.0 250 446-718 1-257 (257)
164 cd05092 PTKc_TrkA Catalytic do 100.0 1.4E-36 3E-41 316.0 21.3 257 440-718 5-280 (280)
165 cd05099 PTKc_FGFR4 Catalytic d 100.0 2.1E-36 4.5E-41 320.1 22.9 259 440-719 12-293 (314)
166 cd06615 PKc_MEK Catalytic doma 100.0 2.1E-36 4.5E-41 319.1 22.8 265 440-715 1-287 (308)
167 cd05047 PTKc_Tie Catalytic dom 100.0 2.5E-36 5.3E-41 312.3 23.0 251 446-720 1-269 (270)
168 cd05100 PTKc_FGFR3 Catalytic d 100.0 1.8E-36 3.9E-41 323.4 22.6 260 440-720 12-294 (334)
169 cd05066 PTKc_EphR_A Catalytic 100.0 2.4E-36 5.1E-41 311.9 22.7 257 440-720 4-267 (267)
170 cd05041 PTKc_Fes_like Catalyti 100.0 3.1E-36 6.8E-41 307.9 23.4 249 446-718 1-251 (251)
171 KOG0667 Dual-specificity tyros 100.0 2.8E-37 6.2E-42 329.4 16.1 197 441-651 187-393 (586)
172 cd05082 PTKc_Csk Catalytic dom 100.0 2.4E-36 5.1E-41 309.8 22.3 248 440-719 6-256 (256)
173 cd06619 PKc_MKK5 Catalytic dom 100.0 2.5E-36 5.4E-41 313.9 22.6 250 441-715 2-253 (279)
174 cd05570 STKc_PKC Catalytic dom 100.0 8.3E-37 1.8E-41 323.5 19.4 243 446-715 1-252 (318)
175 PTZ00266 NIMA-related protein 100.0 6.2E-37 1.3E-41 351.3 19.4 259 437-715 10-295 (1021)
176 cd07876 STKc_JNK2 Catalytic do 100.0 1.7E-36 3.6E-41 326.9 21.8 265 438-715 19-315 (359)
177 cd05575 STKc_SGK Catalytic dom 100.0 8.8E-37 1.9E-41 324.1 18.9 238 446-710 1-242 (323)
178 cd00192 PTKc Catalytic domain 100.0 3.4E-36 7.4E-41 309.0 22.5 251 446-717 1-262 (262)
179 KOG0596 Dual specificity; seri 100.0 2.3E-37 4.9E-42 320.4 13.4 254 439-715 360-627 (677)
180 cd06638 STKc_myosinIIIA Cataly 100.0 2E-36 4.3E-41 315.7 20.8 264 430-716 8-284 (286)
181 cd05044 PTKc_c-ros Catalytic d 100.0 2.5E-36 5.5E-41 311.9 21.3 252 446-718 1-269 (269)
182 cd07863 STKc_CDK4 Catalytic do 100.0 2.1E-36 4.6E-41 315.8 20.7 266 441-715 1-285 (288)
183 cd05625 STKc_LATS1 Catalytic d 100.0 6E-37 1.3E-41 333.2 17.2 252 441-715 2-305 (382)
184 cd07872 STKc_PCTAIRE2 Catalyti 100.0 1.5E-36 3.2E-41 320.5 19.7 266 440-715 6-286 (309)
185 cd05042 PTKc_Aatyk Catalytic d 100.0 3E-36 6.5E-41 311.5 21.5 253 447-717 2-268 (269)
186 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 4.1E-36 8.9E-41 313.1 22.7 271 441-720 5-284 (284)
187 cd05060 PTKc_Syk_like Catalyti 100.0 5.7E-36 1.2E-40 307.2 23.3 248 446-719 1-255 (257)
188 cd05598 STKc_LATS Catalytic do 100.0 3.7E-37 8E-42 334.2 15.1 253 440-715 1-301 (376)
189 cd05034 PTKc_Src_like Catalyti 100.0 4.4E-36 9.4E-41 308.7 22.3 254 439-718 5-260 (261)
190 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 4E-36 8.8E-41 312.8 22.2 270 441-719 5-283 (284)
191 cd08217 STKc_Nek2 Catalytic do 100.0 4.1E-36 8.8E-41 309.2 21.8 256 441-715 1-262 (265)
192 KOG0032 Ca2+/calmodulin-depend 100.0 2.3E-36 5E-41 320.4 20.4 253 438-715 33-293 (382)
193 cd07861 STKc_CDK1_euk Catalyti 100.0 3.9E-36 8.6E-41 313.2 21.7 268 441-715 1-282 (285)
194 cd06637 STKc_TNIK Catalytic do 100.0 2.4E-36 5.2E-41 312.6 19.8 252 438-715 4-269 (272)
195 KOG3653 Transforming growth fa 100.0 9.5E-36 2.1E-40 303.8 23.7 264 445-719 215-503 (534)
196 KOG0983 Mitogen-activated prot 100.0 1.9E-36 4.1E-41 288.0 17.1 244 445-715 97-349 (391)
197 cd07875 STKc_JNK1 Catalytic do 100.0 2.1E-36 4.6E-41 326.8 19.9 265 438-715 22-318 (364)
198 KOG0577 Serine/threonine prote 100.0 1.6E-37 3.6E-42 322.2 10.6 245 442-715 28-278 (948)
199 cd07874 STKc_JNK3 Catalytic do 100.0 1.2E-36 2.6E-41 327.6 17.7 266 437-715 14-311 (355)
200 cd05073 PTKc_Hck Catalytic dom 100.0 7.5E-36 1.6E-40 306.9 22.8 254 439-719 5-260 (260)
201 cd06654 STKc_PAK1 Catalytic do 100.0 5.7E-36 1.2E-40 313.9 22.2 249 440-715 20-270 (296)
202 cd05057 PTKc_EGFR_like Catalyt 100.0 8.2E-36 1.8E-40 310.0 23.2 255 440-719 7-268 (279)
203 cd05617 STKc_aPKC_zeta Catalyt 100.0 1.6E-36 3.4E-41 322.6 18.2 250 446-715 1-260 (327)
204 cd05630 STKc_GRK6 Catalytic do 100.0 3.7E-36 8.1E-41 313.5 20.5 252 442-715 2-261 (285)
205 cd05603 STKc_SGK2 Catalytic do 100.0 1.9E-36 4.1E-41 321.3 18.5 238 446-710 1-242 (321)
206 cd05602 STKc_SGK1 Catalytic do 100.0 1.7E-36 3.8E-41 322.1 18.2 243 446-715 1-247 (325)
207 cd05615 STKc_cPKC_alpha Cataly 100.0 2.7E-36 5.8E-41 320.2 19.4 242 441-709 1-246 (323)
208 cd05632 STKc_GRK5 Catalytic do 100.0 3.5E-36 7.5E-41 313.8 19.8 252 442-715 2-261 (285)
209 cd05622 STKc_ROCK1 Catalytic d 100.0 1.8E-36 3.8E-41 327.3 17.9 258 434-716 37-305 (371)
210 cd06631 STKc_YSK4 Catalytic do 100.0 9.6E-36 2.1E-40 306.9 22.5 253 441-715 1-262 (265)
211 cd05074 PTKc_Tyro3 Catalytic d 100.0 9.1E-36 2E-40 308.5 22.4 258 442-719 1-272 (273)
212 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 4.5E-36 9.7E-41 312.8 20.2 261 440-716 5-267 (284)
213 cd05604 STKc_SGK3 Catalytic do 100.0 1.7E-36 3.7E-41 322.3 17.3 241 446-713 1-245 (325)
214 cd05086 PTKc_Aatyk2 Catalytic 100.0 8.3E-36 1.8E-40 308.0 21.9 254 447-717 2-267 (268)
215 KOG4279 Serine/threonine prote 100.0 4.7E-37 1E-41 323.6 12.6 243 447-715 582-832 (1226)
216 KOG4717 Serine/threonine prote 100.0 3.5E-36 7.5E-41 307.8 18.5 248 440-714 18-269 (864)
217 cd06639 STKc_myosinIIIB Cataly 100.0 6.3E-36 1.4E-40 312.8 21.1 263 430-715 12-287 (291)
218 cd08227 PK_STRAD_alpha Pseudok 100.0 6.1E-36 1.3E-40 318.3 21.4 266 445-715 3-307 (327)
219 cd05058 PTKc_Met_Ron Catalytic 100.0 1.1E-35 2.4E-40 305.9 22.6 251 446-720 1-260 (262)
220 cd06612 STKc_MST1_2 Catalytic 100.0 1.1E-35 2.3E-40 304.7 22.3 249 440-715 3-253 (256)
221 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 1.2E-35 2.6E-40 305.7 22.6 238 446-716 1-261 (262)
222 cd06651 STKc_MEKK3 Catalytic d 100.0 1.6E-35 3.4E-40 305.6 23.5 252 440-715 2-261 (266)
223 cd05112 PTKc_Itk Catalytic dom 100.0 1.1E-35 2.3E-40 304.9 22.0 249 441-716 5-255 (256)
224 cd08223 STKc_Nek4 Catalytic do 100.0 1.1E-35 2.4E-40 304.8 22.1 251 441-715 1-254 (257)
225 cd05110 PTKc_HER4 Catalytic do 100.0 8.9E-36 1.9E-40 313.6 21.8 255 440-719 7-268 (303)
226 cd07878 STKc_p38beta_MAPK11 Ca 100.0 3.1E-36 6.7E-41 322.9 18.6 264 437-715 12-298 (343)
227 PHA03211 serine/threonine kina 100.0 5.4E-36 1.2E-40 329.0 20.9 262 439-715 168-455 (461)
228 cd07847 STKc_CDKL1_4 Catalytic 100.0 7.3E-36 1.6E-40 311.3 20.9 267 440-715 1-283 (286)
229 PHA03209 serine/threonine kina 100.0 1.1E-35 2.5E-40 319.8 22.8 191 438-646 64-256 (357)
230 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 1E-35 2.2E-40 308.3 21.6 238 447-717 2-274 (274)
231 cd08221 STKc_Nek9 Catalytic do 100.0 1.5E-35 3.3E-40 303.7 22.7 252 441-716 1-254 (256)
232 cd08528 STKc_Nek10 Catalytic d 100.0 1.2E-35 2.7E-40 306.8 22.0 257 441-718 1-269 (269)
233 PHA03207 serine/threonine kina 100.0 6.4E-36 1.4E-40 325.8 20.6 262 439-715 91-375 (392)
234 cd06617 PKc_MKK3_6 Catalytic d 100.0 8.7E-36 1.9E-40 310.3 20.8 254 440-715 1-261 (283)
235 cd07868 STKc_CDK8 Catalytic do 100.0 1.5E-35 3.3E-40 314.0 22.9 197 445-649 6-219 (317)
236 cd05627 STKc_NDR2 Catalytic do 100.0 2.5E-36 5.4E-41 325.6 17.1 253 440-715 1-293 (360)
237 PF00069 Pkinase: Protein kina 100.0 1.1E-36 2.3E-41 312.8 13.6 252 442-715 1-257 (260)
238 cd06628 STKc_MAPKKK_Byr2_like 100.0 1.9E-35 4E-40 305.1 22.9 251 441-715 1-264 (267)
239 cd06624 STKc_ASK Catalytic dom 100.0 1.7E-35 3.6E-40 305.7 22.3 254 437-715 5-265 (268)
240 cd05597 STKc_DMPK_like Catalyt 100.0 4.4E-36 9.5E-41 319.8 18.5 256 440-715 1-266 (331)
241 cd08219 STKc_Nek3 Catalytic do 100.0 1.1E-35 2.5E-40 304.5 20.6 250 441-715 1-252 (255)
242 cd07873 STKc_PCTAIRE1 Catalyti 100.0 8.8E-36 1.9E-40 313.3 20.1 266 440-715 6-286 (301)
243 cd06629 STKc_MAPKKK_Bck1_like 100.0 1.5E-35 3.4E-40 306.6 21.6 256 441-715 2-269 (272)
244 cd07846 STKc_CDKL2_3 Catalytic 100.0 3.2E-36 7E-41 314.1 16.5 267 440-715 1-283 (286)
245 cd06643 STKc_SLK Catalytic dom 100.0 1.7E-35 3.7E-40 308.0 22.0 249 442-715 7-262 (282)
246 cd06642 STKc_STK25-YSK1 Cataly 100.0 6.3E-36 1.4E-40 310.5 18.2 246 442-715 6-253 (277)
247 cd06645 STKc_MAP4K3 Catalytic 100.0 9.4E-36 2E-40 307.4 19.4 252 440-715 9-265 (267)
248 cd06610 STKc_OSR1_SPAK Catalyt 100.0 2.4E-35 5.3E-40 304.0 22.4 258 440-715 1-264 (267)
249 cd07833 STKc_CDKL Catalytic do 100.0 9.2E-36 2E-40 310.9 19.4 267 441-715 2-285 (288)
250 cd05046 PTK_CCK4 Pseudokinase 100.0 2.2E-35 4.7E-40 306.0 22.0 258 440-718 5-275 (275)
251 cd06656 STKc_PAK3 Catalytic do 100.0 1.6E-35 3.6E-40 310.6 21.2 250 439-715 18-269 (297)
252 cd08218 STKc_Nek1 Catalytic do 100.0 1.7E-35 3.6E-40 303.5 20.7 251 441-715 1-253 (256)
253 cd06609 STKc_MST3_like Catalyt 100.0 1.9E-35 4.1E-40 306.4 21.2 248 441-715 2-251 (274)
254 KOG0199 ACK and related non-re 100.0 1.8E-36 4E-41 320.0 13.6 249 444-716 114-369 (1039)
255 cd06655 STKc_PAK2 Catalytic do 100.0 2E-35 4.4E-40 309.7 21.5 249 440-715 19-269 (296)
256 cd05623 STKc_MRCK_alpha Cataly 100.0 7.9E-36 1.7E-40 318.0 18.5 256 440-715 1-266 (332)
257 cd07839 STKc_CDK5 Catalytic do 100.0 8E-36 1.7E-40 310.8 18.1 266 441-715 1-281 (284)
258 cd07867 STKc_CDC2L6 Catalytic 100.0 4E-35 8.7E-40 310.7 23.6 197 445-649 6-219 (317)
259 cd06613 STKc_MAP4K3_like Catal 100.0 3.7E-35 7.9E-40 301.8 22.6 253 440-715 3-260 (262)
260 cd06644 STKc_STK10_LOK Catalyt 100.0 3.7E-35 8.1E-40 307.1 23.0 251 440-715 12-269 (292)
261 cd06640 STKc_MST4 Catalytic do 100.0 4.3E-35 9.4E-40 304.2 23.2 248 440-715 4-253 (277)
262 cd07832 STKc_CCRK Catalytic do 100.0 3.1E-35 6.7E-40 306.6 22.1 267 441-715 1-282 (286)
263 cd05624 STKc_MRCK_beta Catalyt 100.0 8.2E-36 1.8E-40 317.7 18.1 256 440-715 1-266 (331)
264 cd05083 PTKc_Chk Catalytic dom 100.0 2.5E-35 5.4E-40 301.9 20.9 246 440-718 6-253 (254)
265 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 3.3E-35 7.1E-40 301.6 21.6 237 446-717 1-259 (259)
266 cd05056 PTKc_FAK Catalytic dom 100.0 3.4E-35 7.4E-40 303.7 21.8 254 440-719 6-265 (270)
267 cd06636 STKc_MAP4K4_6 Catalyti 100.0 2.7E-35 6E-40 306.5 21.1 259 431-715 7-279 (282)
268 cd06652 STKc_MEKK2 Catalytic d 100.0 8E-35 1.7E-39 300.1 24.0 252 440-715 2-261 (265)
269 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 1.2E-35 2.6E-40 305.1 17.7 239 446-717 1-258 (258)
270 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 3.8E-35 8.2E-40 306.3 21.7 257 441-715 2-266 (287)
271 cd06632 STKc_MEKK1_plant Catal 100.0 4.2E-35 9E-40 300.6 21.4 249 441-715 1-255 (258)
272 cd05586 STKc_Sck1_like Catalyt 100.0 5.2E-36 1.1E-40 319.3 15.2 242 448-715 1-253 (330)
273 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 3.1E-35 6.7E-40 306.8 20.6 253 441-715 2-262 (286)
274 cd06608 STKc_myosinIII_like Ca 100.0 3.2E-35 7E-40 304.4 20.2 255 438-715 4-272 (275)
275 cd07860 STKc_CDK2_3 Catalytic 100.0 1.7E-35 3.8E-40 308.3 18.2 267 441-715 1-281 (284)
276 cd06630 STKc_MEKK1 Catalytic d 100.0 6.4E-35 1.4E-39 301.2 22.0 255 441-715 1-264 (268)
277 KOG4257 Focal adhesion tyrosin 100.0 1.2E-35 2.6E-40 310.2 16.3 253 441-719 390-649 (974)
278 cd08220 STKc_Nek8 Catalytic do 100.0 5.3E-35 1.1E-39 299.6 20.9 250 441-715 1-253 (256)
279 cd07841 STKc_CDK7 Catalytic do 100.0 3.9E-35 8.4E-40 307.9 20.2 266 441-715 1-282 (298)
280 cd06611 STKc_SLK_like Catalyti 100.0 4.6E-35 9.9E-40 304.5 20.3 251 440-715 5-262 (280)
281 KOG0584 Serine/threonine prote 100.0 3E-36 6.6E-41 318.3 11.5 246 445-715 45-296 (632)
282 KOG1025 Epidermal growth facto 100.0 7E-36 1.5E-40 320.8 14.1 251 444-719 700-957 (1177)
283 cd05609 STKc_MAST Catalytic do 100.0 6.2E-35 1.3E-39 307.5 21.2 256 440-717 1-272 (305)
284 cd06605 PKc_MAPKK Catalytic do 100.0 2.9E-35 6.3E-40 303.2 18.2 253 441-715 2-257 (265)
285 cd07843 STKc_CDC2L1 Catalytic 100.0 3.7E-35 8E-40 307.4 19.2 267 440-715 5-290 (293)
286 smart00219 TyrKc Tyrosine kina 100.0 1.3E-34 2.8E-39 296.9 22.7 250 443-716 2-258 (258)
287 cd06607 STKc_TAO Catalytic dom 100.0 1.4E-34 3E-39 305.1 23.6 247 440-715 15-267 (307)
288 cd06626 STKc_MEKK4 Catalytic d 100.0 1.3E-34 2.9E-39 298.0 22.9 254 441-715 1-261 (264)
289 cd08530 STKc_CNK2-like Catalyt 100.0 4.5E-35 9.7E-40 300.0 19.2 251 441-715 1-253 (256)
290 cd07844 STKc_PCTAIRE_like Cata 100.0 8.1E-35 1.8E-39 304.4 20.9 265 440-715 5-288 (291)
291 cd06917 STKc_NAK1_like Catalyt 100.0 1.5E-34 3.4E-39 300.0 22.5 248 441-715 2-255 (277)
292 cd05574 STKc_phototropin_like 100.0 8.8E-35 1.9E-39 308.0 20.9 255 440-715 1-289 (316)
293 cd07870 STKc_PFTAIRE2 Catalyti 100.0 1.2E-34 2.6E-39 303.2 21.6 267 439-715 4-288 (291)
294 cd07835 STKc_CDK1_like Catalyt 100.0 6E-35 1.3E-39 304.0 19.3 266 442-715 1-280 (283)
295 cd06623 PKc_MAPKK_plant_like C 100.0 1.9E-34 4.2E-39 296.7 22.7 252 440-715 1-256 (264)
296 cd06641 STKc_MST3 Catalytic do 100.0 1.8E-34 3.9E-39 299.6 22.3 247 441-715 5-253 (277)
297 cd06658 STKc_PAK5 Catalytic do 100.0 3.1E-35 6.6E-40 307.7 16.6 247 442-715 24-272 (292)
298 cd07831 STKc_MOK Catalytic dom 100.0 1.6E-34 3.5E-39 300.5 21.3 260 442-715 1-279 (282)
299 cd05580 STKc_PKA Catalytic dom 100.0 1.6E-34 3.5E-39 302.0 20.8 246 440-715 1-254 (290)
300 cd07852 STKc_MAPK15 Catalytic 100.0 9.9E-35 2.1E-39 310.4 19.6 269 438-715 5-295 (337)
301 cd07837 STKc_CdkB_plant Cataly 100.0 1.2E-34 2.6E-39 303.7 19.7 270 440-715 1-291 (295)
302 cd07850 STKc_JNK Catalytic dom 100.0 1.4E-34 3E-39 311.2 20.6 265 438-715 14-311 (353)
303 cd06616 PKc_MKK4 Catalytic dom 100.0 6.3E-35 1.4E-39 304.8 17.3 256 441-715 5-267 (288)
304 cd08225 STKc_Nek5 Catalytic do 100.0 1.1E-34 2.3E-39 297.5 18.6 251 441-715 1-254 (257)
305 cd06635 STKc_TAO1 Catalytic do 100.0 4.9E-34 1.1E-38 302.3 24.0 248 441-717 26-279 (317)
306 cd06606 STKc_MAPKKK Catalytic 100.0 4.4E-34 9.6E-39 292.7 22.8 253 441-715 1-257 (260)
307 cd06614 STKc_PAK Catalytic dom 100.0 3.5E-34 7.7E-39 298.8 22.3 252 438-715 17-270 (286)
308 cd06647 STKc_PAK_I Catalytic d 100.0 2.6E-34 5.6E-39 300.9 21.2 249 440-715 19-269 (293)
309 cd07842 STKc_CDK8_like Catalyt 100.0 1.3E-34 2.9E-39 306.5 19.2 270 442-715 2-313 (316)
310 cd05633 STKc_GRK3 Catalytic do 100.0 3E-34 6.4E-39 298.2 21.3 243 447-715 1-255 (279)
311 cd07845 STKc_CDK10 Catalytic d 100.0 2.3E-34 4.9E-39 303.8 20.6 268 439-715 6-290 (309)
312 PLN00009 cyclin-dependent kina 100.0 2.3E-34 5.1E-39 301.4 20.2 268 440-715 2-284 (294)
313 cd06659 STKc_PAK6 Catalytic do 100.0 9.8E-35 2.1E-39 304.6 17.3 244 445-715 26-271 (297)
314 PHA03210 serine/threonine kina 100.0 1E-34 2.2E-39 324.8 18.6 274 437-715 145-454 (501)
315 KOG1024 Receptor-like protein 100.0 1.4E-34 3E-39 287.8 16.7 268 431-719 275-555 (563)
316 cd07840 STKc_CDK9_like Catalyt 100.0 2.1E-34 4.6E-39 300.3 19.1 266 442-715 1-284 (287)
317 cd07865 STKc_CDK9 Catalytic do 100.0 4.2E-34 9E-39 301.7 21.5 269 440-715 12-307 (310)
318 cd07836 STKc_Pho85 Catalytic d 100.0 3.9E-34 8.4E-39 298.1 20.9 267 441-715 1-281 (284)
319 cd06648 STKc_PAK_II Catalytic 100.0 3.9E-34 8.6E-39 298.3 20.8 248 441-715 20-269 (285)
320 cd05122 PKc_STE Catalytic doma 100.0 8.9E-34 1.9E-38 289.1 22.6 249 441-715 1-251 (253)
321 cd07864 STKc_CDK12 Catalytic d 100.0 3.8E-34 8.2E-39 301.0 20.4 270 437-715 4-299 (302)
322 cd07855 STKc_ERK5 Catalytic do 100.0 1.4E-34 2.9E-39 308.9 17.2 269 439-715 4-294 (334)
323 KOG0579 Ste20-like serine/thre 100.0 1.5E-35 3.3E-40 309.3 9.5 249 442-715 34-289 (1187)
324 cd05578 STKc_Yank1 Catalytic d 100.0 1.4E-34 3E-39 297.0 16.6 249 441-714 1-254 (258)
325 cd08215 STKc_Nek Catalytic dom 100.0 5.5E-34 1.2E-38 291.9 21.0 253 441-715 1-255 (258)
326 cd07849 STKc_ERK1_2_like Catal 100.0 1.7E-34 3.8E-39 308.3 17.5 266 439-715 4-292 (336)
327 KOG4645 MAPKKK (MAP kinase kin 100.0 5E-36 1.1E-40 337.1 5.7 256 437-715 1232-1494(1509)
328 cd05572 STKc_cGK_PKG Catalytic 100.0 6.6E-34 1.4E-38 292.7 20.9 244 448-715 1-252 (262)
329 cd05577 STKc_GRK Catalytic dom 100.0 5.6E-34 1.2E-38 295.9 20.3 246 448-715 1-254 (277)
330 cd08226 PK_STRAD_beta Pseudoki 100.0 6.8E-34 1.5E-38 302.7 21.3 264 447-715 5-308 (328)
331 KOG0666 Cyclin C-dependent kin 100.0 3E-35 6.5E-40 284.6 9.8 272 440-715 24-337 (438)
332 cd07858 STKc_TEY_MAPK_plant Ca 100.0 2.3E-34 4.9E-39 307.5 17.7 266 439-715 4-291 (337)
333 cd06653 STKc_MEKK3_like_1 Cata 100.0 1.7E-33 3.7E-38 290.1 22.8 252 440-715 2-261 (264)
334 KOG2052 Activin A type IB rece 100.0 6.8E-34 1.5E-38 288.2 19.3 257 440-719 211-503 (513)
335 KOG1035 eIF-2alpha kinase GCN2 100.0 1.6E-34 3.4E-39 323.8 16.0 254 436-714 475-870 (1351)
336 cd07879 STKc_p38delta_MAPK13 C 100.0 3.9E-34 8.5E-39 306.3 18.2 262 438-715 13-297 (342)
337 cd05606 STKc_beta_ARK Catalyti 100.0 1.7E-33 3.7E-38 292.3 22.1 243 447-715 1-255 (278)
338 cd05118 STKc_CMGC Catalytic do 100.0 7.8E-34 1.7E-38 295.5 19.5 265 442-715 1-280 (283)
339 cd07838 STKc_CDK4_6_like Catal 100.0 2.5E-33 5.4E-38 292.3 23.3 264 442-715 1-284 (287)
340 cd06618 PKc_MKK7 Catalytic dom 100.0 8.6E-34 1.9E-38 297.5 19.8 251 440-715 15-273 (296)
341 cd06627 STKc_Cdc7_like Catalyt 100.0 1.8E-33 3.9E-38 287.7 21.6 249 441-715 1-251 (254)
342 KOG0986 G protein-coupled rece 100.0 7.1E-35 1.5E-39 295.1 10.6 247 440-708 185-434 (591)
343 KOG0586 Serine/threonine prote 100.0 5.1E-34 1.1E-38 301.3 17.4 249 439-715 55-306 (596)
344 cd08216 PK_STRAD Pseudokinase 100.0 1.8E-33 3.9E-38 297.7 21.3 264 446-715 8-295 (314)
345 cd07877 STKc_p38alpha_MAPK14 C 100.0 1.2E-33 2.5E-38 302.9 19.5 272 430-715 7-300 (345)
346 KOG0662 Cyclin-dependent kinas 100.0 2.4E-34 5.3E-39 257.4 11.8 266 441-715 3-283 (292)
347 PHA02882 putative serine/threo 100.0 1.4E-33 3.1E-38 295.4 19.7 261 439-717 11-294 (294)
348 KOG0604 MAP kinase-activated p 100.0 1.1E-33 2.5E-38 272.6 17.2 252 437-715 58-322 (400)
349 PHA03390 pk1 serine/threonine- 100.0 3.8E-33 8.3E-38 287.9 22.3 250 432-715 6-262 (267)
350 cd06634 STKc_TAO2 Catalytic do 100.0 1.9E-33 4E-38 296.6 20.4 247 441-716 16-268 (308)
351 KOG0200 Fibroblast/platelet-de 100.0 1.4E-33 3.1E-38 320.3 20.5 260 440-719 296-579 (609)
352 cd07830 STKc_MAK_like Catalyti 100.0 1.4E-33 3E-38 293.8 18.7 264 442-715 1-280 (283)
353 KOG4250 TANK binding protein k 100.0 4.1E-34 8.9E-39 305.7 15.0 199 442-648 15-226 (732)
354 cd05611 STKc_Rim15_like Cataly 100.0 2.2E-33 4.7E-38 288.5 19.7 241 446-713 2-246 (260)
355 cd06633 STKc_TAO3 Catalytic do 100.0 5.7E-33 1.2E-37 293.5 23.3 245 442-715 23-273 (313)
356 cd07866 STKc_BUR1 Catalytic do 100.0 9.8E-34 2.1E-38 299.1 17.4 270 439-715 7-308 (311)
357 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 1.9E-33 4.1E-38 299.0 19.5 267 435-715 5-288 (328)
358 cd05579 STKc_MAST_like Catalyt 100.0 2.1E-33 4.5E-38 289.0 18.2 244 448-714 1-253 (265)
359 cd07880 STKc_p38gamma_MAPK12 C 100.0 2.3E-33 5E-38 300.4 19.1 265 437-715 12-298 (343)
360 cd05613 STKc_MSK1_N N-terminal 100.0 4.4E-33 9.5E-38 291.2 20.5 252 441-715 1-268 (290)
361 cd06657 STKc_PAK4 Catalytic do 100.0 2.7E-33 5.9E-38 292.9 18.8 243 446-715 26-270 (292)
362 cd07834 STKc_MAPK Catalytic do 100.0 1.9E-33 4.2E-38 299.6 17.8 267 441-715 1-289 (330)
363 cd08222 STKc_Nek11 Catalytic d 100.0 3.2E-33 6.9E-38 287.3 18.2 252 441-715 1-257 (260)
364 cd07857 STKc_MPK1 Catalytic do 100.0 3.6E-33 7.7E-38 297.7 19.2 266 441-715 1-292 (332)
365 cd07829 STKc_CDK_like Catalyti 100.0 3.4E-33 7.5E-38 290.5 18.6 265 442-715 1-279 (282)
366 cd05581 STKc_PDK1 Catalytic do 100.0 2.2E-33 4.8E-38 291.5 17.1 251 440-715 1-277 (280)
367 PTZ00024 cyclin-dependent prot 100.0 6E-33 1.3E-37 296.4 20.3 268 440-715 8-313 (335)
368 KOG1006 Mitogen-activated prot 100.0 5.9E-35 1.3E-39 277.0 3.2 247 446-714 70-326 (361)
369 cd07851 STKc_p38 Catalytic dom 100.0 1.9E-33 4.1E-38 301.1 14.6 264 438-715 13-298 (343)
370 cd05583 STKc_MSK_N N-terminal 100.0 8.3E-33 1.8E-37 288.8 18.7 254 442-717 2-265 (288)
371 KOG0607 MAP kinase-interacting 100.0 5.9E-33 1.3E-37 269.5 15.9 266 431-714 74-360 (463)
372 KOG0669 Cyclin T-dependent kin 100.0 1E-34 2.3E-39 273.1 3.6 268 441-715 18-315 (376)
373 KOG0690 Serine/threonine prote 100.0 1.2E-33 2.7E-38 274.6 9.7 248 440-714 168-423 (516)
374 cd07854 STKc_MAPK4_6 Catalytic 100.0 1.1E-32 2.4E-37 295.1 17.1 266 439-715 4-300 (342)
375 KOG1151 Tousled-like protein k 100.0 1.5E-33 3.3E-38 283.8 9.7 258 440-714 463-740 (775)
376 KOG4236 Serine/threonine prote 100.0 2.5E-33 5.3E-38 287.6 11.3 246 445-715 569-819 (888)
377 KOG0603 Ribosomal protein S6 k 100.0 4.6E-33 1E-37 295.6 13.7 240 438-715 320-563 (612)
378 KOG0612 Rho-associated, coiled 100.0 1.2E-33 2.6E-38 314.2 8.4 259 432-715 67-338 (1317)
379 cd05123 STKc_AGC Catalytic dom 100.0 4.1E-32 9E-37 277.0 18.9 240 448-714 1-246 (250)
380 KOG0587 Traf2- and Nck-interac 100.0 2.2E-32 4.8E-37 297.7 17.6 259 432-715 11-282 (953)
381 cd05610 STKc_MASTL Catalytic d 100.0 4.6E-32 9.9E-37 312.8 20.0 147 440-593 4-152 (669)
382 cd05576 STKc_RPK118_like Catal 100.0 6.8E-32 1.5E-36 273.4 17.6 218 451-709 4-223 (237)
383 KOG0671 LAMMER dual specificit 100.0 1.7E-32 3.8E-37 273.6 10.1 264 438-715 87-406 (415)
384 KOG0696 Serine/threonine prote 100.0 2.7E-32 5.9E-37 272.7 10.2 241 440-707 349-593 (683)
385 KOG0984 Mitogen-activated prot 100.0 1.1E-31 2.4E-36 245.9 10.4 202 440-648 46-254 (282)
386 PLN03225 Serine/threonine-prot 100.0 6.4E-31 1.4E-35 295.8 17.6 264 438-715 130-450 (566)
387 PLN03224 probable serine/threo 100.0 1.5E-30 3.4E-35 285.2 19.7 262 439-715 144-500 (507)
388 smart00220 S_TKc Serine/Threon 100.0 4.5E-30 9.9E-35 259.9 19.0 238 452-715 1-241 (244)
389 KOG0608 Warts/lats-like serine 100.0 1.2E-30 2.6E-35 273.2 14.5 209 441-656 630-881 (1034)
390 KOG0614 cGMP-dependent protein 100.0 6.4E-31 1.4E-35 269.4 4.2 243 440-708 420-665 (732)
391 KOG1027 Serine/threonine prote 100.0 4.7E-30 1E-34 278.4 9.7 247 442-715 511-767 (903)
392 KOG0668 Casein kinase II, alph 100.0 1.2E-29 2.5E-34 235.9 10.1 256 439-715 37-322 (338)
393 KOG0695 Serine/threonine prote 100.0 4.1E-29 8.9E-34 243.8 12.8 248 440-707 250-502 (593)
394 KOG0664 Nemo-like MAPK-related 100.0 7E-31 1.5E-35 249.7 -0.4 265 443-716 56-344 (449)
395 KOG0665 Jun-N-terminal kinase 100.0 1.3E-28 2.8E-33 240.5 9.7 261 441-715 18-310 (369)
396 cd00180 PKc Catalytic domain o 100.0 8.6E-27 1.9E-31 230.1 21.4 211 448-716 1-215 (215)
397 KOG0576 Mitogen-activated prot 99.9 9.1E-29 2E-33 261.6 4.0 253 439-715 14-271 (829)
398 KOG0670 U4/U6-associated splic 99.9 8.9E-28 1.9E-32 247.0 8.3 268 435-715 427-746 (752)
399 KOG1290 Serine/threonine prote 99.9 1.1E-26 2.4E-31 238.1 15.8 131 440-578 78-221 (590)
400 KOG1152 Signal transduction se 99.9 1.7E-27 3.6E-32 248.1 8.4 197 440-647 561-770 (772)
401 PLN00113 leucine-rich repeat r 99.9 2.3E-26 5E-31 279.6 15.9 216 24-242 22-267 (968)
402 KOG1167 Serine/threonine prote 99.9 1.3E-26 2.9E-31 234.9 11.0 266 435-715 31-381 (418)
403 smart00221 STYKc Protein kinas 99.9 2.1E-25 4.5E-30 223.3 18.5 199 442-648 1-202 (225)
404 KOG1345 Serine/threonine kinas 99.9 5.3E-26 1.2E-30 216.8 8.7 249 438-714 22-283 (378)
405 PLN00181 protein SPA1-RELATED; 99.9 1.3E-25 2.7E-30 265.8 9.2 196 494-715 28-265 (793)
406 KOG0195 Integrin-linked kinase 99.9 3.2E-25 7E-30 211.2 6.1 248 446-720 196-447 (448)
407 smart00750 KIND kinase non-cat 99.9 5E-24 1.1E-28 205.2 14.3 165 523-719 1-169 (176)
408 PRK09188 serine/threonine prot 99.9 4E-23 8.7E-28 217.5 15.6 166 438-621 16-194 (365)
409 COG0515 SPS1 Serine/threonine 99.9 1.1E-20 2.4E-25 200.0 21.1 262 442-715 2-275 (384)
410 KOG0590 Checkpoint kinase and 99.9 1.5E-22 3.3E-27 227.1 7.0 255 444-715 322-585 (601)
411 KOG1164 Casein kinase (serine/ 99.9 8.8E-21 1.9E-25 200.6 19.8 258 441-719 19-297 (322)
412 KOG1165 Casein kinase (serine/ 99.8 2.7E-20 5.9E-25 182.9 16.5 255 440-718 28-298 (449)
413 KOG1163 Casein kinase (serine/ 99.8 1.1E-20 2.3E-25 177.9 12.6 255 439-717 14-282 (341)
414 cd05147 RIO1_euk RIO kinase fa 99.8 1.7E-20 3.6E-25 181.9 11.5 141 445-595 2-167 (190)
415 KOG1023 Natriuretic peptide re 99.8 2.3E-20 5E-25 199.7 11.3 215 492-719 1-224 (484)
416 cd05145 RIO1_like RIO kinase f 99.8 1.7E-19 3.6E-24 175.6 15.0 141 445-596 2-168 (190)
417 PRK10359 lipopolysaccharide co 99.8 2.9E-20 6.3E-25 182.0 9.0 172 438-640 29-216 (232)
418 PRK12274 serine/threonine prot 99.8 4.7E-19 1E-23 169.6 14.3 186 444-648 6-209 (218)
419 KOG0603 Ribosomal protein S6 k 99.8 2.6E-20 5.7E-25 198.8 4.1 227 447-709 1-232 (612)
420 KOG0617 Ras suppressor protein 99.8 4.7E-21 1E-25 171.2 -4.4 170 70-244 32-211 (264)
421 KOG1240 Protein kinase contain 99.8 1.6E-19 3.5E-24 201.6 6.0 250 441-718 24-294 (1431)
422 PF14531 Kinase-like: Kinase-l 99.8 9.3E-19 2E-23 176.6 10.9 233 443-706 15-288 (288)
423 PRK10345 hypothetical protein; 99.7 1.5E-17 3.2E-22 162.7 14.3 137 442-592 4-156 (210)
424 PLN03150 hypothetical protein; 99.7 6.4E-18 1.4E-22 192.8 12.6 152 25-201 366-527 (623)
425 smart00090 RIO RIO-like kinase 99.7 4.8E-17 1E-21 163.2 12.6 144 440-595 28-198 (237)
426 KOG4194 Membrane glycoprotein 99.7 2E-18 4.4E-23 180.9 1.6 186 63-248 261-455 (873)
427 cd05144 RIO2_C RIO kinase fami 99.7 9.3E-17 2E-21 157.6 13.0 145 434-595 9-175 (198)
428 KOG1166 Mitotic checkpoint ser 99.7 3.8E-17 8.1E-22 186.9 11.4 196 437-644 695-901 (974)
429 PRK14879 serine/threonine prot 99.7 1.2E-16 2.7E-21 158.6 13.5 136 446-594 2-143 (211)
430 TIGR03724 arch_bud32 Kae1-asso 99.7 2.1E-16 4.5E-21 155.3 12.6 132 447-594 1-138 (199)
431 PRK09605 bifunctional UGMP fam 99.7 1.9E-16 4.2E-21 178.9 14.1 139 440-595 333-477 (535)
432 KOG0444 Cytoskeletal regulator 99.7 8E-18 1.7E-22 177.3 0.1 165 70-239 102-295 (1255)
433 KOG4158 BRPK/PTEN-induced prot 99.7 9.7E-16 2.1E-20 154.3 13.8 194 496-714 274-509 (598)
434 KOG0606 Microtubule-associated 99.7 6.1E-17 1.3E-21 181.3 5.5 207 440-707 83-304 (1205)
435 KOG1033 eIF-2alpha kinase PEK/ 99.7 4.3E-17 9.4E-22 171.1 3.8 175 512-713 330-510 (516)
436 KOG0444 Cytoskeletal regulator 99.6 3.1E-17 6.7E-22 172.9 -0.0 172 63-238 70-248 (1255)
437 cd05120 APH_ChoK_like Aminogly 99.6 3.7E-15 8.1E-20 139.0 13.2 134 445-594 3-138 (155)
438 KOG0617 Ras suppressor protein 99.6 2.3E-17 4.9E-22 147.7 -2.6 154 90-247 28-185 (264)
439 cd05119 RIO RIO kinase family, 99.6 3E-15 6.5E-20 145.5 11.8 137 445-595 2-164 (187)
440 KOG4194 Membrane glycoprotein 99.6 2.8E-16 6.1E-21 165.0 -0.6 137 65-202 215-354 (873)
441 KOG4237 Extracellular matrix p 99.6 9.3E-16 2E-20 154.5 2.2 195 56-250 38-364 (498)
442 PRK01723 3-deoxy-D-manno-octul 99.5 5.7E-14 1.2E-18 141.3 14.4 138 445-595 36-192 (239)
443 PRK15370 E3 ubiquitin-protein 99.5 4.2E-14 9E-19 162.3 14.8 207 24-246 56-339 (754)
444 KOG0590 Checkpoint kinase and 99.5 1.1E-15 2.4E-20 172.0 1.1 255 441-714 21-285 (601)
445 KOG0472 Leucine-rich repeat pr 99.5 1.9E-16 4.1E-21 159.5 -5.6 167 71-244 137-309 (565)
446 PRK15370 E3 ubiquitin-protein 99.5 1E-13 2.3E-18 159.0 9.3 160 71-245 199-359 (754)
447 KOG0532 Leucine-rich repeat (L 99.5 1.4E-15 3E-20 159.8 -6.0 170 69-245 73-247 (722)
448 KOG0472 Leucine-rich repeat pr 99.5 1.2E-15 2.6E-20 153.8 -6.5 155 64-224 153-310 (565)
449 PLN03150 hypothetical protein; 99.4 9.6E-14 2.1E-18 158.7 7.6 104 143-246 420-529 (623)
450 TIGR01982 UbiB 2-polyprenylphe 99.4 6.1E-13 1.3E-17 145.4 11.6 147 440-596 118-308 (437)
451 PRK15387 E3 ubiquitin-protein 99.4 2.6E-13 5.6E-18 154.9 8.8 147 72-238 283-448 (788)
452 KOG1266 Protein kinase [Signal 99.4 2.4E-13 5.2E-18 134.3 6.7 206 489-716 118-332 (458)
453 PRK15387 E3 ubiquitin-protein 99.4 9.2E-13 2E-17 150.4 11.3 153 72-245 223-375 (788)
454 PRK04750 ubiB putative ubiquin 99.3 1.5E-12 3.2E-17 143.8 5.8 151 438-597 118-316 (537)
455 KOG0601 Cyclin-dependent kinas 99.3 2.3E-12 5.1E-17 138.5 6.8 251 440-714 114-378 (524)
456 KOG0532 Leucine-rich repeat (L 99.3 1.8E-13 4E-18 144.1 -4.8 151 68-224 95-247 (722)
457 cd05151 ChoK Choline Kinase (C 99.3 2.6E-11 5.7E-16 115.7 10.3 129 446-593 4-135 (170)
458 PLN03210 Resistant to P. syrin 99.2 7.2E-11 1.6E-15 144.9 13.6 96 143-241 780-875 (1153)
459 KOG0618 Serine/threonine phosp 99.2 7.9E-13 1.7E-17 146.7 -3.2 167 72-243 288-487 (1081)
460 KOG0618 Serine/threonine phosp 99.2 6E-13 1.3E-17 147.6 -5.5 170 71-246 241-463 (1081)
461 cd00116 LRR_RI Leucine-rich re 99.2 2.2E-12 4.9E-17 136.6 -1.4 173 70-242 80-285 (319)
462 KOG0601 Cyclin-dependent kinas 99.2 1.8E-11 4E-16 131.7 5.1 257 429-717 253-516 (524)
463 PLN03210 Resistant to P. syrin 99.2 1.1E-10 2.4E-15 143.2 12.6 87 71-159 611-699 (1153)
464 cd05146 RIO3_euk RIO kinase fa 99.1 5.5E-10 1.2E-14 107.4 13.0 137 446-595 3-174 (197)
465 COG4886 Leucine-rich repeat (L 99.1 5E-11 1.1E-15 130.2 5.3 133 63-200 82-220 (394)
466 KOG1243 Protein kinase [Genera 99.1 1.3E-09 2.8E-14 118.6 15.6 168 460-643 33-200 (690)
467 cd05154 ACAD10_11_like Acyl-Co 99.1 7.1E-10 1.5E-14 110.7 12.7 143 446-594 4-206 (223)
468 cd00116 LRR_RI Leucine-rich re 99.1 8.4E-12 1.8E-16 132.2 -3.2 161 63-224 15-206 (319)
469 COG4886 Leucine-rich repeat (L 99.0 1.2E-10 2.7E-15 127.1 4.5 168 71-245 116-287 (394)
470 PF14580 LRR_9: Leucine-rich r 99.0 3.1E-10 6.7E-15 106.9 4.9 81 118-202 43-126 (175)
471 COG3642 Mn2+-dependent serine/ 99.0 5.9E-09 1.3E-13 96.6 12.0 133 446-594 2-140 (204)
472 KOG1259 Nischarin, modulator o 99.0 6E-11 1.3E-15 115.9 -1.5 122 117-244 284-411 (490)
473 KOG1259 Nischarin, modulator o 98.9 9.2E-11 2E-15 114.6 -0.9 136 84-225 273-413 (490)
474 KOG0606 Microtubule-associated 98.9 6.9E-10 1.5E-14 125.6 3.2 246 442-710 806-1084(1205)
475 PF14580 LRR_9: Leucine-rich r 98.9 7.8E-10 1.7E-14 104.2 2.6 104 117-225 19-127 (175)
476 KOG4237 Extracellular matrix p 98.9 3.2E-10 7E-15 115.0 -0.7 146 101-248 52-204 (498)
477 PRK15123 lipopolysaccharide co 98.8 7.4E-08 1.6E-12 98.0 15.4 144 445-594 27-194 (268)
478 KOG3741 Poly(A) ribonuclease s 98.8 9.3E-08 2E-12 101.0 16.1 218 452-716 288-522 (655)
479 KOG3207 Beta-tubulin folding c 98.8 1.4E-09 3.1E-14 111.9 1.6 159 65-224 140-314 (505)
480 PF13855 LRR_8: Leucine rich r 98.8 4.1E-09 8.9E-14 81.6 2.7 59 118-176 2-60 (61)
481 KOG3087 Serine/threonine prote 98.8 8.8E-08 1.9E-12 88.4 11.5 145 444-594 11-165 (229)
482 PF13855 LRR_8: Leucine rich r 98.7 5.3E-09 1.2E-13 80.9 2.9 61 141-201 1-61 (61)
483 PF01163 RIO1: RIO1 family; I 98.7 7E-08 1.5E-12 92.5 10.6 127 455-595 1-156 (188)
484 KOG4579 Leucine-rich repeat (L 98.6 1.3E-09 2.7E-14 95.0 -4.4 108 73-185 29-142 (177)
485 KOG1859 Leucine-rich repeat pr 98.6 6E-09 1.3E-13 113.2 -2.1 55 27-84 64-122 (1096)
486 KOG0531 Protein phosphatase 1, 98.5 3.5E-08 7.7E-13 108.2 0.6 124 72-202 73-199 (414)
487 KOG2137 Protein kinase [Signal 98.5 6.8E-08 1.5E-12 105.9 2.8 150 549-714 106-264 (700)
488 COG0478 RIO-like serine/threon 98.5 1.4E-06 2.9E-11 86.0 11.2 137 442-594 93-251 (304)
489 COG4248 Uncharacterized protei 98.4 3.5E-06 7.6E-11 87.1 14.0 260 445-718 16-299 (637)
490 KOG4579 Leucine-rich repeat (L 98.4 1E-08 2.2E-13 89.4 -3.9 106 96-205 28-139 (177)
491 PF06293 Kdo: Lipopolysacchari 98.4 2E-06 4.2E-11 84.7 11.5 125 464-595 32-171 (206)
492 KOG3207 Beta-tubulin folding c 98.4 6.9E-08 1.5E-12 99.7 0.7 134 69-203 170-315 (505)
493 KOG1859 Leucine-rich repeat pr 98.3 1.8E-08 3.9E-13 109.6 -6.1 121 97-224 166-292 (1096)
494 PRK09902 hypothetical protein; 98.3 7.6E-06 1.6E-10 79.0 12.4 142 446-594 24-179 (216)
495 KOG0531 Protein phosphatase 1, 98.3 9.6E-08 2.1E-12 104.8 -0.9 171 67-244 91-267 (414)
496 COG0661 AarF Predicted unusual 98.3 4.2E-06 9E-11 92.4 11.7 150 439-597 125-317 (517)
497 TIGR02172 Fb_sc_TIGR02172 Fibr 98.3 1.1E-05 2.4E-10 80.4 13.8 140 446-593 7-181 (226)
498 PF08263 LRRNT_2: Leucine rich 98.2 1.6E-06 3.4E-11 61.5 4.3 38 30-69 2-43 (43)
499 KOG0576 Mitogen-activated prot 98.1 1.4E-06 3E-11 94.6 1.7 181 446-647 248-431 (829)
500 KOG1235 Predicted unusual prot 98.0 2.9E-05 6.2E-10 85.5 11.4 141 446-596 167-356 (538)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=1e-61 Score=588.67 Aligned_cols=537 Identities=26% Similarity=0.412 Sum_probs=345.1
Q ss_pred ceeEEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCCCcc--ccCcEEEecCCcCCCCCcchhhccccccccccc
Q 004994 72 NVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSNLP--VTVRNFSLSGNQLTGSIPESLSRLTQLLDLSLN 149 (720)
Q Consensus 72 ~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~--~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~l~ 149 (720)
+|+.|+|++|++++.+|..+..+++|+.|+|++|+++|.+|..+. .+|+.|+|++|++.|.+|..+ .+++|+.|+|+
T Consensus 405 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~-~~~~L~~L~ls 483 (968)
T PLN00113 405 SLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSF-GSKRLENLDLS 483 (968)
T ss_pred CCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeeecCccc-ccccceEEECc
Confidence 444444444444444444444455555555555555544444332 456666666666665555544 34667777778
Q ss_pred ccccCCCCCchhcCCCCCceEeccCCcccccCCCCCCCCCCCceeeccccccccccc-cccccc-cceEEccCCcCcccC
Q 004994 150 NNHLNGGIPDAFHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNNKLSGTLN-VLEDLH-LIDLNIENNLFSGPI 227 (720)
Q Consensus 150 ~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~~-l~~l~l~~N~l~g~~ 227 (720)
+|++++.+|..|.++++|+.|+|++|++++.+|..+.++++|+.|+|++|.++|.++ .+..+. |+.|+|++|+++|.+
T Consensus 484 ~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 563 (968)
T PLN00113 484 RNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEI 563 (968)
T ss_pred CCccCCccChhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEECCCCcccccC
Confidence 888888888888888888888888888888888888888889999999999888775 455554 888999999999999
Q ss_pred CcccCCCccccccCccCCCcccCCCCCCCCCCCCCCCCCCCCCCCCCCCC--CcccCcccccccccCcchHHHHHHHHHH
Q 004994 228 PEKLLSIPNFRKDGNPFNTTVIALPPTAIPPSIAPAPTFQAPGDQADAPS--AFEMTNSAKAKKFWTTKRVIWVALSAAA 305 (720)
Q Consensus 228 p~~~~~l~~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~v~~i~~~ 305 (720)
|..+..++.|+..+...|...+..|................+......+. ..++.. ..+ . ....++|++++++
T Consensus 564 p~~l~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~~~~~~~~~c~~---~~~-~-~~~~~~~~~~~~~ 638 (968)
T PLN00113 564 PKNLGNVESLVQVNISHNHLHGSLPSTGAFLAINASAVAGNIDLCGGDTTSGLPPCKR---VRK-T-PSWWFYITCTLGA 638 (968)
T ss_pred ChhHhcCcccCEEeccCCcceeeCCCcchhcccChhhhcCCccccCCccccCCCCCcc---ccc-c-ceeeeehhHHHHH
Confidence 98887777766655555555444543322111100000000000000000 000110 000 1 1111122222222
Q ss_pred HHHHHHHHHHHHHHHHhhccccccCCCCCcccCCCCCCCCCCCCCCCCCCccccccCccccccCCCCccccccccCCCCC
Q 004994 306 ILCALGCSLFMWRYCKTRRVNRDAEKNTGTYKGHGEKPNYKNSPLQPSGQVEEVSKEPVVKSQDGHGVDSRRMVSSPRPQ 385 (720)
Q Consensus 306 ~~~~l~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (720)
+++++++++ ++.++++|++... +...... + .++..
T Consensus 639 ~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~----------------~-----~~~~~--------------------- 673 (968)
T PLN00113 639 FLVLALVAF-GFVFIRGRNNLEL--KRVENED----------------G-----TWELQ--------------------- 673 (968)
T ss_pred HHHHHHHHH-HHHHHHhhhcccc--ccccccc----------------c-----ccccc---------------------
Confidence 222222222 2223332221110 0000000 0 00000
Q ss_pred CCCCCCCCCCCCcccccccCCCCccccccCCCCCCCccCCcccccCHHHHHHHhcCCCCCCeeccCCCceEEEEEe-CCC
Q 004994 386 DEKLPLPPLPLPLVEKVTVKPLAPAEVTRRSSPSTNVISSSVSVFTIASLQQYTNSFSEGNFIGEGLLGSVYKAEL-PGG 464 (720)
Q Consensus 386 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~g 464 (720)
... ......++.+++ ...|...++||+|+||.||+|.. .+|
T Consensus 674 ------------~~~-----------------------~~~~~~~~~~~~---~~~~~~~~~ig~G~~g~Vy~~~~~~~~ 715 (968)
T PLN00113 674 ------------FFD-----------------------SKVSKSITINDI---LSSLKEENVISRGKKGASYKGKSIKNG 715 (968)
T ss_pred ------------ccc-----------------------cccchhhhHHHH---HhhCCcccEEccCCCeeEEEEEECCCC
Confidence 000 000011233333 34577788999999999999975 578
Q ss_pred cEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEeeCCCCCHHHHhhccchhccccCHHHH
Q 004994 465 KLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIR 544 (720)
Q Consensus 465 ~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~ 544 (720)
..||||++..... ...+|++++++++|||||+++|+|.+.+..++||||+++|+|.++++ .++|..+
T Consensus 716 ~~vavK~~~~~~~------~~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~-------~l~~~~~ 782 (968)
T PLN00113 716 MQFVVKEINDVNS------IPSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLR-------NLSWERR 782 (968)
T ss_pred cEEEEEEccCCcc------ccHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCcHHHHHh-------cCCHHHH
Confidence 9999999864321 11245888999999999999999999999999999999999999984 3789999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCCCcccccCccccccCCCCccC-CCCC
Q 004994 545 IRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE-SGSY 623 (720)
Q Consensus 545 ~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~ 623 (720)
.+|+.|+|+||+|||+.+.++|+||||||+||+++.++.+++. ||.+...... ....++.+|+|||+. .+.+
T Consensus 783 ~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~------~~~~~t~~y~aPE~~~~~~~ 855 (968)
T PLN00113 783 RKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTD------TKCFISSAYVAPETRETKDI 855 (968)
T ss_pred HHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-eccccccccC------CCccccccccCcccccCCCC
Confidence 9999999999999998878899999999999999999988876 6665443211 123567899999998 5579
Q ss_pred CCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcCCCCCch--hhHHHHHHHHHHHHHHhcc
Q 004994 624 SCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDGA--YLAKSLSRFADIISRCVQW 701 (720)
Q Consensus 624 ~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~l~~~cl~~ 701 (720)
+.++|||||||++|||+||+.||+.... ....+++|+.....+ .....++|+.+... ...+...++.+++.+||+.
T Consensus 856 ~~~sDv~S~Gvvl~el~tg~~p~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~ 933 (968)
T PLN00113 856 TEKSDIYGFGLILIELLTGKSPADAEFG-VHGSIVEWARYCYSD-CHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTAT 933 (968)
T ss_pred CcccchhhHHHHHHHHHhCCCCCCcccC-CCCcHHHHHHHhcCc-cchhheeCccccCCCCccHHHHHHHHHHHHhhCcC
Confidence 9999999999999999999999964322 223455555433222 22345566655332 2345566788999999999
Q ss_pred CCCCCCCHHHHHHHHHhh
Q 004994 702 EPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 702 dP~~RPt~~evl~~L~~~ 719 (720)
||++||||+||++.|+++
T Consensus 934 ~P~~RPt~~evl~~L~~~ 951 (968)
T PLN00113 934 DPTARPCANDVLKTLESA 951 (968)
T ss_pred CchhCcCHHHHHHHHHHh
Confidence 999999999999999986
No 2
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9e-56 Score=468.24 Aligned_cols=287 Identities=47% Similarity=0.802 Sum_probs=252.5
Q ss_pred cccccCHHHHHHHhcCCCCCCeeccCCCceEEEEEeCCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEe
Q 004994 426 SVSVFTIASLQQYTNSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIG 505 (720)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~ 505 (720)
....|+++++..+|++|...++||+|+||.||+|.+.+|..||||++....... .++|..|++++.+++|||+|+|+|
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~--~~eF~~Ei~~ls~l~H~Nlv~LlG 138 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQG--EREFLNEVEILSRLRHPNLVKLLG 138 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcc--hhHHHHHHHHHhcCCCcCcccEEE
Confidence 456799999999999999999999999999999999999999999887543322 566999999999999999999999
Q ss_pred EeccCC-eEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCe
Q 004994 506 YCNEHG-QHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIV 584 (720)
Q Consensus 506 ~~~~~~-~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~ 584 (720)
||.+.+ +.+||||||++|+|.++++..... .++|.+|++||.++|+||+|||+.+.++||||||||+|||||+++++
T Consensus 139 yC~e~~~~~~LVYEym~nGsL~d~L~~~~~~--~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~a 216 (361)
T KOG1187|consen 139 YCLEGGEHRLLVYEYMPNGSLEDHLHGKKGE--PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNA 216 (361)
T ss_pred EEecCCceEEEEEEccCCCCHHHHhCCCCCC--CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCE
Confidence 999988 599999999999999999875433 78999999999999999999999999899999999999999999999
Q ss_pred EEccccCCCCCCCCCCcccccCc-cccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcc
Q 004994 585 RVSDCGLAPLLFSGSTNELSEGL-LTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAI 662 (720)
Q Consensus 585 kl~DFGla~~~~~~~~~~~~~~~-~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~ 662 (720)
||+|||+|+........ .... .||.+|+||||. .+..+.|+|||||||+|+|++||+.|.+...+.....++.|+.
T Consensus 217 KlsDFGLa~~~~~~~~~--~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~ 294 (361)
T KOG1187|consen 217 KLSDFGLAKLGPEGDTS--VSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAK 294 (361)
T ss_pred EccCccCcccCCccccc--eeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHH
Confidence 99999999765431111 1112 789999999999 6899999999999999999999999998766666677899987
Q ss_pred cccCchhhhhhhcCCCCC-chhhH-HHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 663 PRLHDIDALSRMVDPSLD-GAYLA-KSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
+.+.+. .+.+++|+.+. +.+.. ++...+..++.+|++.+|.+||+|.||+++|+.+
T Consensus 295 ~~~~~~-~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~ 352 (361)
T KOG1187|consen 295 PLLEEG-KLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGI 352 (361)
T ss_pred HHHHCc-chhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhh
Confidence 777665 78899999987 55554 6788899999999999999999999999999764
No 3
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=4.4e-48 Score=385.73 Aligned_cols=250 Identities=27% Similarity=0.432 Sum_probs=206.6
Q ss_pred CCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCC-eEEEEEeeC
Q 004994 443 SEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHG-QHLLVYDYG 520 (720)
Q Consensus 443 ~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~-~~~lv~e~~ 520 (720)
+..+.||+|..|+|||+.+ .+++.+|+|++... .+....++..+|++++++.+|||||.+||.|...+ +..++||||
T Consensus 82 e~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~-~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEYM 160 (364)
T KOG0581|consen 82 ERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLN-IDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEYM 160 (364)
T ss_pred hhhhhcccCCCcEEEEEEEcCCCeEEEEEeeccc-CCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhhc
Confidence 3457899999999999966 57999999999543 34566789999999999999999999999999888 599999999
Q ss_pred CCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCCC
Q 004994 521 GNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGST 600 (720)
Q Consensus 521 ~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~~ 600 (720)
++|||.+++.. .+.+++....+|+.+|.+||.|||+. .+||||||||+|||++..|++||||||.++.+..+
T Consensus 161 DgGSLd~~~k~----~g~i~E~~L~~ia~~VL~GL~YLh~~--~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS-- 232 (364)
T KOG0581|consen 161 DGGSLDDILKR----VGRIPEPVLGKIARAVLRGLSYLHEE--RKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS-- 232 (364)
T ss_pred CCCCHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHhhc--cCeeeccCCHHHeeeccCCCEEeccccccHHhhhh--
Confidence 99999999853 25688999999999999999999974 38999999999999999999999999999987543
Q ss_pred cccccCccccccCCCCccCCC-CCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcCCCC
Q 004994 601 NELSEGLLTAHGSGAPEFESG-SYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSL 679 (720)
Q Consensus 601 ~~~~~~~~~~~~~~aPE~~~~-~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (720)
......||..|||||.+.+ .|+.++||||||+.++|+.+|+.||....+.. .+ -.+-+..+++...
T Consensus 233 --~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~-~~----------~~~Ll~~Iv~~pp 299 (364)
T KOG0581|consen 233 --IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPY-LD----------IFELLCAIVDEPP 299 (364)
T ss_pred --hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCC-CC----------HHHHHHHHhcCCC
Confidence 4556889999999999955 79999999999999999999999997541100 00 0122333333111
Q ss_pred CchhhH-HHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 680 DGAYLA-KSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 680 ~~~~~~-~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
+ ..+. ..+++|++|+..||++||.+|||++|+++|
T Consensus 300 P-~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~H 335 (364)
T KOG0581|consen 300 P-RLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQH 335 (364)
T ss_pred C-CCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 1 1222 467899999999999999999999999875
No 4
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-47 Score=400.66 Aligned_cols=252 Identities=33% Similarity=0.512 Sum_probs=208.2
Q ss_pred CCeeccCCCceEEEEEeCCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCC-eEEEEEeeCCCC
Q 004994 445 GNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHG-QHLLVYDYGGNC 523 (720)
Q Consensus 445 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~-~~~lv~e~~~~g 523 (720)
.+.||+|+||+||+|.+.+...||||++..........++|.+|+.+|.+++|||||+++|+|.+.. ...+|||||++|
T Consensus 46 ~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~~G 125 (362)
T KOG0192|consen 46 EEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMPGG 125 (362)
T ss_pred hhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCCCC
Confidence 4559999999999999976656999999865433333679999999999999999999999999887 799999999999
Q ss_pred CHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCC-eeecCCCCCCeEEcCCC-CeEEccccCCCCCCCCCCc
Q 004994 524 TLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPP-IVHGNFKSSNILLDEKL-IVRVSDCGLAPLLFSGSTN 601 (720)
Q Consensus 524 sL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~-ivHrDlkp~NiLl~~~~-~~kl~DFGla~~~~~~~~~ 601 (720)
+|.++++.. ....+++..+++++.+||+||.|||+. + ||||||||+|||++.++ ++||+|||+++......
T Consensus 126 sL~~~l~~~--~~~~l~~~~~l~~aldiArGm~YLH~~---~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~-- 198 (362)
T KOG0192|consen 126 SLSVLLHKK--RKRKLPLKVRLRIALDIARGMEYLHSE---GPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK-- 198 (362)
T ss_pred cHHHHHhhc--ccCCCCHHHHHHHHHHHHHHHHHHhcC---CCeeecccChhhEEEcCCCCEEEECCCccceeecccc--
Confidence 999999753 357899999999999999999999997 5 99999999999999998 99999999998764321
Q ss_pred ccccCccccccCCCCccCCC---CCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcCCC
Q 004994 602 ELSEGLLTAHGSGAPEFESG---SYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPS 678 (720)
Q Consensus 602 ~~~~~~~~~~~~~aPE~~~~---~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (720)
.......||+.|||||.+.+ .|+.|+|||||||+||||+||+.||....+.. ....++...
T Consensus 199 ~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~----------------~~~~v~~~~ 262 (362)
T KOG0192|consen 199 TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQ----------------VASAVVVGG 262 (362)
T ss_pred ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHH----------------HHHHHHhcC
Confidence 22233678999999999974 49999999999999999999999998654311 111111111
Q ss_pred CCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 679 LDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 679 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
.....+..++..+..++.+||+.||+.||++.|++..|+.+
T Consensus 263 ~Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~ 303 (362)
T KOG0192|consen 263 LRPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESI 303 (362)
T ss_pred CCCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHH
Confidence 12222233567888999999999999999999999999865
No 5
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6.6e-46 Score=371.97 Aligned_cols=253 Identities=21% Similarity=0.332 Sum_probs=204.5
Q ss_pred HhcCCCCCCeeccCCCceEEEE-EeCCCcEEEEEEecccccccc-----cHHHHHHHHHHHHccCCCceeEEEeEeccCC
Q 004994 438 YTNSFSEGNFIGEGLLGSVYKA-ELPGGKLLAVKKLSNTVSQRQ-----TDEEFLELASTISRLRHGNIVELIGYCNEHG 511 (720)
Q Consensus 438 ~~~~~~~~~~lg~G~~g~Vy~~-~~~~g~~vavK~l~~~~~~~~-----~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~ 511 (720)
+.+.|...+.||+|+||.|-+| ..++|+.||||++.+...... ......+|+++|++|+|||||+++++|...+
T Consensus 170 ~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~d 249 (475)
T KOG0615|consen 170 FNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPD 249 (475)
T ss_pred hcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCC
Confidence 4567778899999999999999 667899999999986543221 1223469999999999999999999999999
Q ss_pred eEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCC---CCeEEcc
Q 004994 512 QHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEK---LIVRVSD 588 (720)
Q Consensus 512 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~---~~~kl~D 588 (720)
..||||||++||+|.+.+... +.+....-.-++.|+..|+.|||+. ||+||||||+|||+..+ ..+||+|
T Consensus 250 s~YmVlE~v~GGeLfd~vv~n----k~l~ed~~K~~f~Qll~avkYLH~~---GI~HRDiKPeNILl~~~~e~~llKItD 322 (475)
T KOG0615|consen 250 SSYMVLEYVEGGELFDKVVAN----KYLREDLGKLLFKQLLTAVKYLHSQ---GIIHRDIKPENILLSNDAEDCLLKITD 322 (475)
T ss_pred ceEEEEEEecCccHHHHHHhc----cccccchhHHHHHHHHHHHHHHHHc---CcccccCCcceEEeccCCcceEEEecc
Confidence 999999999999999998543 4455556677999999999999998 99999999999999765 7899999
Q ss_pred ccCCCCCCCCCCcccccCccccccCCCCccCC-C--C-CCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccc
Q 004994 589 CGLAPLLFSGSTNELSEGLLTAHGSGAPEFES-G--S-YSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPR 664 (720)
Q Consensus 589 FGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~-~--~-~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~ 664 (720)
||+|+..+. ..+....+||+.|.|||++. + . +..++|+||+|||||-+++|.+||.+......
T Consensus 323 FGlAK~~g~---~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~s---------- 389 (475)
T KOG0615|consen 323 FGLAKVSGE---GSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPS---------- 389 (475)
T ss_pred cchhhcccc---ceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCcc----------
Confidence 999998753 34566789999999999983 2 2 34589999999999999999999976432210
Q ss_pred cCchhhhhhhcCCCC--CchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 665 LHDIDALSRMVDPSL--DGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 665 ~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
...++...+. ...++.+..++..+++.+||..||++|||+.|++++
T Consensus 390 -----l~eQI~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~h 437 (475)
T KOG0615|consen 390 -----LKEQILKGRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALNH 437 (475)
T ss_pred -----HHHHHhcCcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcC
Confidence 0011111111 123456677889999999999999999999999975
No 6
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-45 Score=383.06 Aligned_cols=249 Identities=27% Similarity=0.420 Sum_probs=209.5
Q ss_pred CCeeccCCCceEEEEEeCCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEeeCCCCC
Q 004994 445 GNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDYGGNCT 524 (720)
Q Consensus 445 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gs 524 (720)
.+.||+|.||+||.|.++....||+|.++.. ....+.|.+|+++|++|+|+|||+++|+|..++.++||||||+.|+
T Consensus 211 ~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~---~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~Gs 287 (468)
T KOG0197|consen 211 IRELGSGQFGEVWLGKWNGSTKVAVKTIKEG---SMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKGS 287 (468)
T ss_pred HHHhcCCccceEEEEEEcCCCcccceEEecc---ccChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccCc
Confidence 4679999999999999988889999999754 3456789999999999999999999999999889999999999999
Q ss_pred HHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCCCcccc
Q 004994 525 LHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELS 604 (720)
Q Consensus 525 L~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~~~~ 604 (720)
|.++|+.. ....+...+.+.++.|||+|++||++. ++|||||.++|||++++..+||+|||+|+...+..+ ...
T Consensus 288 Ll~yLr~~--~~~~l~~~~Ll~~a~qIaeGM~YLes~---~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y-~~~ 361 (468)
T KOG0197|consen 288 LLDYLRTR--EGGLLNLPQLLDFAAQIAEGMAYLESK---NYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEY-TAS 361 (468)
T ss_pred HHHHhhhc--CCCccchHHHHHHHHHHHHHHHHHHhC---CccchhhhhhheeeccCceEEEcccccccccCCCce-eec
Confidence 99999862 356788889999999999999999998 899999999999999999999999999996544332 233
Q ss_pred cCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcccccCchhhhhhhcCCCCCch
Q 004994 605 EGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDGA 682 (720)
Q Consensus 605 ~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 682 (720)
.+..-...|.|||.+ .+.|+.|||||||||+||||+| |+.||...... .+.+.++....-.
T Consensus 362 ~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~-----------------ev~~~le~GyRlp 424 (468)
T KOG0197|consen 362 EGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNE-----------------EVLELLERGYRLP 424 (468)
T ss_pred CCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHH-----------------HHHHHHhccCcCC
Confidence 333335678899998 7889999999999999999999 99999754322 1222233333333
Q ss_pred hhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 683 YLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 683 ~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
.+..|++++.++|..||+.+|++|||++.+...|+++
T Consensus 425 ~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~ 461 (468)
T KOG0197|consen 425 RPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDF 461 (468)
T ss_pred CCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHh
Confidence 4556778999999999999999999999999998875
No 7
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.6e-44 Score=380.29 Aligned_cols=249 Identities=24% Similarity=0.402 Sum_probs=210.5
Q ss_pred cCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEeccccc-ccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVS-QRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVY 517 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 517 (720)
..|..+++||+|||++||+++. .+|+.||+|++.+... .....+....|+++.+.|+|||||+++++|++.+..|||.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 5789999999999999999965 8899999999976432 3455677889999999999999999999999999999999
Q ss_pred eeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCC
Q 004994 518 DYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFS 597 (720)
Q Consensus 518 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~ 597 (720)
|+|.+++|.++++ .++.+++.+...++.||+.||.|||+. +|||||||-.|++|+++.++||+|||+|..+..
T Consensus 98 ELC~~~sL~el~K----rrk~ltEpEary~l~QIv~GlkYLH~~---~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~ 170 (592)
T KOG0575|consen 98 ELCHRGSLMELLK----RRKPLTEPEARYFLRQIVEGLKYLHSL---GIIHRDLKLGNLFLNENMNVKIGDFGLATQLEY 170 (592)
T ss_pred EecCCccHHHHHH----hcCCCCcHHHHHHHHHHHHHHHHHHhc---CceecccchhheeecCcCcEEecccceeeeecC
Confidence 9999999999985 457899999999999999999999998 999999999999999999999999999998854
Q ss_pred CCCcccccCccccccCCCCccCCC-CCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcC
Q 004994 598 GSTNELSEGLLTAHGSGAPEFESG-SYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVD 676 (720)
Q Consensus 598 ~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (720)
.+ .......||+.|.|||++.+ ..+..+||||+|||||.|++|++||+...-.+....++.. +
T Consensus 171 ~~--Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~--------------~ 234 (592)
T KOG0575|consen 171 DG--ERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLN--------------E 234 (592)
T ss_pred cc--cccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhc--------------C
Confidence 32 23345889999999999954 5789999999999999999999999765433332222211 1
Q ss_pred CCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 677 PSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 677 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.. .+...+.+..+||.++|+.||.+|||+++|+.+
T Consensus 235 Y~----~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h 269 (592)
T KOG0575|consen 235 YS----MPSHLSAEAKDLIRKLLRPNPSERPSLDEVLDH 269 (592)
T ss_pred cc----cccccCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 11 112334577899999999999999999999975
No 8
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=2.1e-45 Score=354.14 Aligned_cols=266 Identities=21% Similarity=0.347 Sum_probs=208.9
Q ss_pred cCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEe
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYD 518 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 518 (720)
+.|+...++|+|+||+|||++. ++|+.||||++.....+....+-.++|+++|++++|+|+|.++++|......++|+|
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE 81 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFE 81 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEee
Confidence 3577778999999999999965 569999999998766555666778999999999999999999999999999999999
Q ss_pred eCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCC
Q 004994 519 YGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSG 598 (720)
Q Consensus 519 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~ 598 (720)
|++.--|.++- .....++.....+++.|+++|+.|+|+. ++|||||||+|||++.++.+||||||+|+.+...
T Consensus 82 ~~dhTvL~eLe----~~p~G~~~~~vk~~l~Q~l~ai~~cHk~---n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~p 154 (396)
T KOG0593|consen 82 YCDHTVLHELE----RYPNGVPSELVKKYLYQLLKAIHFCHKN---NCIHRDIKPENILITQNGVVKLCDFGFARTLSAP 154 (396)
T ss_pred ecchHHHHHHH----hccCCCCHHHHHHHHHHHHHHhhhhhhc---CeecccCChhheEEecCCcEEeccchhhHhhcCC
Confidence 99985444432 3445678888999999999999999987 8999999999999999999999999999998632
Q ss_pred CCcccccCccccccCCCCccCC--CCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCc--------h
Q 004994 599 STNELSEGLLTAHGSGAPEFES--GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHD--------I 668 (720)
Q Consensus 599 ~~~~~~~~~~~~~~~~aPE~~~--~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~--------~ 668 (720)
.........|+||+|||.+- .+|+..+||||+||++.||+||++-|.+..+.+....++.....+.. .
T Consensus 155 --gd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N 232 (396)
T KOG0593|consen 155 --GDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSN 232 (396)
T ss_pred --cchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccC
Confidence 33445578899999999983 47999999999999999999999999876554443333332222211 0
Q ss_pred hhhhhhcCCCCC------chhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 669 DALSRMVDPSLD------GAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 669 ~~~~~~~~~~~~------~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
..+..+.-|... ..++ .....+.++++.||+.||++|++.+|++.+
T Consensus 233 ~~F~Gv~lP~~~~~epLe~k~p-~~s~~~ld~~k~cL~~dP~~R~sc~qll~H 284 (396)
T KOG0593|consen 233 PFFHGVRLPEPEHPEPLERKYP-KISNVLLDLLKKCLKMDPDDRLSCEQLLHH 284 (396)
T ss_pred CceeeeecCCCCCccchhhhcc-cchHHHHHHHHHHhcCCccccccHHHHhcC
Confidence 111111111111 1122 233467899999999999999999999864
No 9
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-44 Score=363.42 Aligned_cols=203 Identities=27% Similarity=0.447 Sum_probs=181.6
Q ss_pred hcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEE
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVY 517 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 517 (720)
..+|...+.||+|+|++||+|++ +++..||||.+.+....+...+-...|+++|++++|||||.++++++..+.+|+||
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVM 88 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVM 88 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEE
Confidence 35788888899999999999976 46899999999876555667778899999999999999999999999999999999
Q ss_pred eeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCC------CCeEEccccC
Q 004994 518 DYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEK------LIVRVSDCGL 591 (720)
Q Consensus 518 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~------~~~kl~DFGl 591 (720)
|||.+|+|.++++. +..+++......+.|+|.||++||+. +||||||||.||||+.. -.+||+|||+
T Consensus 89 EyC~gGDLs~yi~~----~~~l~e~t~r~Fm~QLA~alq~L~~~---~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGf 161 (429)
T KOG0595|consen 89 EYCNGGDLSDYIRR----RGRLPEATARHFMQQLASALQFLHEN---NIIHRDLKPQNILLSTTARNDTSPVLKIADFGF 161 (429)
T ss_pred EeCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCcceEEeccCCCCCCCceEEecccch
Confidence 99999999999964 34788899999999999999999998 89999999999999764 4689999999
Q ss_pred CCCCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCC
Q 004994 592 APLLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRP 651 (720)
Q Consensus 592 a~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~ 651 (720)
|+.+.. ..+.....|++.|||||+. .++|+.|+|+||.|+|+||+++|+.||+....
T Consensus 162 AR~L~~---~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~ 219 (429)
T KOG0595|consen 162 ARFLQP---GSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETP 219 (429)
T ss_pred hhhCCc---hhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCH
Confidence 999864 3455668899999999999 88999999999999999999999999986544
No 10
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.5e-45 Score=351.71 Aligned_cols=259 Identities=22% Similarity=0.323 Sum_probs=212.0
Q ss_pred CCCCCCeeccCCCceEEEE-EeCCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEe-EeccCCe-EEEEE
Q 004994 441 SFSEGNFIGEGLLGSVYKA-ELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIG-YCNEHGQ-HLLVY 517 (720)
Q Consensus 441 ~~~~~~~lg~G~~g~Vy~~-~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~-~~~~~~~-~~lv~ 517 (720)
+|.+.++||+|.||+|||+ .+.+|..||.|.+.-...+.+..+.+..|+.+|++|+|||||++++ -+.++.+ ++|||
T Consensus 20 ~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlnivm 99 (375)
T KOG0591|consen 20 DYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIVM 99 (375)
T ss_pred HHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHHH
Confidence 4566788999999999999 5689999999999865556677788999999999999999999998 4444444 89999
Q ss_pred eeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCC-CCeeecCCCCCCeEEcCCCCeEEccccCCCCCC
Q 004994 518 DYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCE-PPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLF 596 (720)
Q Consensus 518 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~-~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~ 596 (720)
||++.|+|..+++...+.++.++++..++++.|+++||..+|.... .-|+||||||.||+++.+|.|||+|||+++++.
T Consensus 100 E~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~ 179 (375)
T KOG0591|consen 100 ELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLS 179 (375)
T ss_pred HhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHhc
Confidence 9999999999998888888899999999999999999999998432 239999999999999999999999999999985
Q ss_pred CCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhc
Q 004994 597 SGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMV 675 (720)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (720)
.. ........||++||+||.+ ...|+.|+||||+||++|||..-++||.+..- .+ -..++-
T Consensus 180 s~--~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~------~~----------L~~KI~ 241 (375)
T KOG0591|consen 180 SK--TTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNL------LS----------LCKKIE 241 (375)
T ss_pred ch--hHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccH------HH----------HHHHHH
Confidence 43 3455568899999999999 56799999999999999999999999975421 10 011111
Q ss_pred CCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 004994 676 DPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLL 717 (720)
Q Consensus 676 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 717 (720)
.......-.+..+..+..++..|+..||+.||+.-.+++++.
T Consensus 242 qgd~~~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~ 283 (375)
T KOG0591|consen 242 QGDYPPLPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQ 283 (375)
T ss_pred cCCCCCCcHHHhhhHHHHHHHHHccCCcccCCCcchHHHHHH
Confidence 111111112445678899999999999999999666666554
No 11
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.2e-43 Score=364.34 Aligned_cols=267 Identities=24% Similarity=0.371 Sum_probs=208.6
Q ss_pred hcCCCCCCeeccCCCceEEEE-EeCCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccC--CeEEE
Q 004994 439 TNSFSEGNFIGEGLLGSVYKA-ELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEH--GQHLL 515 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~-~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~--~~~~l 515 (720)
.+.|+..+.||+|+||.|||| +..+|+.||+|+++..........-..+||.+|++|+||||+++.+...+. +.+||
T Consensus 116 ~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYl 195 (560)
T KOG0600|consen 116 ADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYL 195 (560)
T ss_pred hHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEE
Confidence 345677789999999999999 668899999999987666667777789999999999999999999988765 78999
Q ss_pred EEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCC
Q 004994 516 VYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLL 595 (720)
Q Consensus 516 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~ 595 (720)
|+|||+. +|.-++.. ..-.|+..++..++.|+++||.|+|.. +|+|||||.+|||||.+|++||+|||+|+++
T Consensus 196 VFeYMdh-DL~GLl~~---p~vkft~~qIKc~mkQLl~Gl~~cH~~---gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y 268 (560)
T KOG0600|consen 196 VFEYMDH-DLSGLLSS---PGVKFTEPQIKCYMKQLLEGLEYCHSR---GVLHRDIKGSNILIDNNGVLKIADFGLARFY 268 (560)
T ss_pred EEecccc-hhhhhhcC---CCcccChHHHHHHHHHHHHHHHHHhhc---CeeeccccccceEEcCCCCEEeccccceeec
Confidence 9999998 78777753 245789999999999999999999998 9999999999999999999999999999988
Q ss_pred CCCCCcccccCccccccCCCCccCCC--CCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchh----------hhccc
Q 004994 596 FSGSTNELSEGLLTAHGSGAPEFESG--SYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLV----------RWAIP 663 (720)
Q Consensus 596 ~~~~~~~~~~~~~~~~~~~aPE~~~~--~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~----------~~~~~ 663 (720)
........+ ...-|.||+|||.+-| .|+.++|+||.||||.||++|++.|.+..+.+....+ .|...
T Consensus 269 ~~~~~~~~T-~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~ 347 (560)
T KOG0600|consen 269 TPSGSAPYT-SRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVS 347 (560)
T ss_pred cCCCCcccc-cceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccc
Confidence 665443333 3455889999999844 6999999999999999999999999876543322211 12222
Q ss_pred ccCchhhhhhhcC--CCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 004994 664 RLHDIDALSRMVD--PSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQ 714 (720)
Q Consensus 664 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 714 (720)
.++....+...-. ..+.+ .....+....+|+..+|..||++|.|+.++++
T Consensus 348 kLP~~~~~kp~~~y~r~l~E-~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~ 399 (560)
T KOG0600|consen 348 KLPHATIFKPQQPYKRRLRE-TFKDFPASALDLLEKLLSLDPDKRGTASSALQ 399 (560)
T ss_pred cCCcccccCCCCcccchHHH-HhccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence 2221111000000 00000 01122456789999999999999999999985
No 12
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=5.8e-43 Score=332.03 Aligned_cols=266 Identities=23% Similarity=0.329 Sum_probs=210.3
Q ss_pred cCCCCCCeeccCCCceEEEE-EeCCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEe
Q 004994 440 NSFSEGNFIGEGLLGSVYKA-ELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYD 518 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~-~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 518 (720)
..|...+++|+|.||.||+| +.++|+.||||+++.............+|++.|++++|+||+.++++|...+...+|+|
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE 81 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE 81 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence 35777889999999999999 56789999999998765555566788999999999999999999999999999999999
Q ss_pred eCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCC
Q 004994 519 YGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSG 598 (720)
Q Consensus 519 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~ 598 (720)
||+. +|+.++++. ...++..+...++.++.+|++|+|.. .|+||||||.|+|++.+|.+||+|||+|+.+...
T Consensus 82 fm~t-dLe~vIkd~---~i~l~pa~iK~y~~m~LkGl~y~H~~---~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p 154 (318)
T KOG0659|consen 82 FMPT-DLEVVIKDK---NIILSPADIKSYMLMTLKGLAYCHSK---WILHRDLKPNNLLISSDGQLKIADFGLARFFGSP 154 (318)
T ss_pred eccc-cHHHHhccc---ccccCHHHHHHHHHHHHHHHHHHHhh---hhhcccCCccceEEcCCCcEEeecccchhccCCC
Confidence 9997 899998653 45678888999999999999999997 8999999999999999999999999999998654
Q ss_pred CCcccccCccccccCCCCccC--CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhh--hcccc---------c
Q 004994 599 STNELSEGLLTAHGSGAPEFE--SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVR--WAIPR---------L 665 (720)
Q Consensus 599 ~~~~~~~~~~~~~~~~aPE~~--~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~--~~~~~---------~ 665 (720)
..... ...-|.||+|||.+ +..|+..+|+||.|||+.||+-|.+-|.+..+.+....+- ...|. +
T Consensus 155 ~~~~~--~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~l 232 (318)
T KOG0659|consen 155 NRIQT--HQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSL 232 (318)
T ss_pred Ccccc--cceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCcccccc
Confidence 43322 23678999999988 4579999999999999999999987776554433222211 11111 1
Q ss_pred CchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 666 HDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 666 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
++...+...-.+.... ....+.+...+|+.+++..||.+|+|+.|++++
T Consensus 233 pdY~~~~~~P~~~~~~-lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 233 PDYVKIQQFPKPPLNN-LFPAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred ccHHHHhcCCCCcccc-ccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 2222222111222222 223344556899999999999999999999875
No 13
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=6.3e-42 Score=355.18 Aligned_cols=265 Identities=24% Similarity=0.354 Sum_probs=217.4
Q ss_pred hcCCCCCCeeccCCCceEEEEEeCCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEe
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYD 518 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 518 (720)
.+.....+.||+|.||+|..+....+..||||.++... ......+|.+|+++|.+++|||||+++|+|..++.+++|+|
T Consensus 537 Rs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a-~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~E 615 (807)
T KOG1094|consen 537 RSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDA-TKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITE 615 (807)
T ss_pred hhheehhhhhcCcccceeEEEEecCceEEEEeecCccc-chhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHH
Confidence 44566678999999999999999888999999998654 34556899999999999999999999999999999999999
Q ss_pred eCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCC
Q 004994 519 YGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSG 598 (720)
Q Consensus 519 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~ 598 (720)
||++|+|.+++...+.. ...-....+|+.|||.||+||.+. ++|||||.++|+|+|.++++||+|||+++-+..+
T Consensus 616 YmEnGDLnqFl~aheap--t~~t~~~vsi~tqiasgmaYLes~---nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg 690 (807)
T KOG1094|consen 616 YMENGDLNQFLSAHELP--TAETAPGVSICTQIASGMAYLESL---NFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSG 690 (807)
T ss_pred HHhcCcHHHHHHhccCc--ccccchhHHHHHHHHHHHHHHHhh---chhhccccccceeecCcccEEecCcccccccccC
Confidence 99999999999765322 234556778999999999999998 9999999999999999999999999999998888
Q ss_pred CCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh--CCCCCCCCCCccccchhhhcccccCchhhhhhhc
Q 004994 599 STNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT--GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMV 675 (720)
Q Consensus 599 ~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt--G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (720)
.+........-...|||+|.+ .++++.++|||+|||.+||+++ .+.||.....+. .++-....+.+..
T Consensus 691 ~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~---vven~~~~~~~~~------ 761 (807)
T KOG1094|consen 691 DYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQ---VVENAGEFFRDQG------ 761 (807)
T ss_pred CceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHH---HHHhhhhhcCCCC------
Confidence 877776666677899999987 8999999999999999999976 888997543322 1111111111100
Q ss_pred CCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 676 DPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 676 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
...--..+..++.++.+++.+||..|.++||+++++...|++.
T Consensus 762 -~~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 762 -RQVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred -cceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 1111123455678899999999999999999999999998863
No 14
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=7.7e-43 Score=348.20 Aligned_cols=242 Identities=24% Similarity=0.319 Sum_probs=199.0
Q ss_pred cCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEeccccc-ccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVS-QRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVY 517 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 517 (720)
++|+..++||+|+||+||.++. ++++.||+|++++... .....+....|..+|.+++||.||+++-.|++.+.+|+|+
T Consensus 25 ~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylVl 104 (357)
T KOG0598|consen 25 DDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLVL 104 (357)
T ss_pred hheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEEE
Confidence 5788899999999999999954 5699999999986543 3345677889999999999999999999999999999999
Q ss_pred eeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCC
Q 004994 518 DYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFS 597 (720)
Q Consensus 518 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~ 597 (720)
||+.||.|...|.. ...|++....-++..|+.||.|||+. +||||||||+|||||.+|+++|+|||+++....
T Consensus 105 d~~~GGeLf~hL~~----eg~F~E~~arfYlaEi~lAL~~LH~~---gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~ 177 (357)
T KOG0598|consen 105 DYLNGGELFYHLQR----EGRFSEDRARFYLAEIVLALGYLHSK---GIIYRDLKPENILLDEQGHIKLTDFGLCKEDLK 177 (357)
T ss_pred eccCCccHHHHHHh----cCCcchhHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHeeecCCCcEEEeccccchhccc
Confidence 99999999999853 45688888888999999999999998 999999999999999999999999999986533
Q ss_pred CCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcC
Q 004994 598 GSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVD 676 (720)
Q Consensus 598 ~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (720)
. ...+...+||+.|||||++ ...|+..+|+||+||++|||++|.+||...+.......+ ..
T Consensus 178 ~--~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I----------------~~ 239 (357)
T KOG0598|consen 178 D--GDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKI----------------LK 239 (357)
T ss_pred C--CCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHH----------------hc
Confidence 2 2234457899999999998 668999999999999999999999999765433221111 11
Q ss_pred CCCCchhhHHHHHHHHHHHHHHhccCCCCCC
Q 004994 677 PSLDGAYLAKSLSRFADIISRCVQWEPGFRP 707 (720)
Q Consensus 677 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP 707 (720)
..+. ..+.-...+.++++.+.|..||++|.
T Consensus 240 ~k~~-~~p~~ls~~ardll~~LL~rdp~~RL 269 (357)
T KOG0598|consen 240 GKLP-LPPGYLSEEARDLLKKLLKRDPRQRL 269 (357)
T ss_pred CcCC-CCCccCCHHHHHHHHHHhccCHHHhc
Confidence 1100 01111235788999999999999995
No 15
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=3.9e-43 Score=383.79 Aligned_cols=256 Identities=27% Similarity=0.439 Sum_probs=217.8
Q ss_pred CCCCeeccCCCceEEEEEeC------CCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEE
Q 004994 443 SEGNFIGEGLLGSVYKAELP------GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLV 516 (720)
Q Consensus 443 ~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 516 (720)
...+.||+|+||+||+|+.. +...||||.+++.. ..+..++|++|++++..++|||||+++|+|.+++..++|
T Consensus 489 ~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a-~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~Mv 567 (774)
T KOG1026|consen 489 VFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKA-ENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLCMV 567 (774)
T ss_pred eehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccc-cHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeEEE
Confidence 34577999999999999753 34689999998653 345678999999999999999999999999999999999
Q ss_pred EeeCCCCCHHHHhhccch----------hccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEE
Q 004994 517 YDYGGNCTLHDLLHSDEE----------AHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRV 586 (720)
Q Consensus 517 ~e~~~~gsL~~~l~~~~~----------~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl 586 (720)
+|||..|||.++|..... ...+++..+.+.||.|||.|+.||-+. .+|||||..+|+|+.++..|||
T Consensus 568 FEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~---~FVHRDLATRNCLVge~l~VKI 644 (774)
T KOG1026|consen 568 FEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSH---HFVHRDLATRNCLVGENLVVKI 644 (774)
T ss_pred EEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---cccccchhhhhceeccceEEEe
Confidence 999999999999964311 133488899999999999999999987 7999999999999999999999
Q ss_pred ccccCCCCCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcccc
Q 004994 587 SDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPR 664 (720)
Q Consensus 587 ~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~ 664 (720)
+|||++|.....++........-...|||||.+ .++|+.+||||||||||||+++ |+.||.+...
T Consensus 645 sDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn------------- 711 (774)
T KOG1026|consen 645 SDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSN------------- 711 (774)
T ss_pred cccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccch-------------
Confidence 999999999888777666555567789999988 7899999999999999999998 9999965332
Q ss_pred cCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 665 LHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 665 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
.+.+..+.+..+ -..++.++.++.+||..||+..|++||+++||-..|+.+
T Consensus 712 ---~EVIe~i~~g~l-L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~ 762 (774)
T KOG1026|consen 712 ---QEVIECIRAGQL-LSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAW 762 (774)
T ss_pred ---HHHHHHHHcCCc-ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHH
Confidence 233333334444 345677889999999999999999999999999999864
No 16
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-43 Score=361.66 Aligned_cols=267 Identities=22% Similarity=0.356 Sum_probs=211.8
Q ss_pred HhcCCCCCCeeccCCCceEEEEE-eCCCcEEEEEEecccccccccHHHHHHHHHHHHccC-CCceeEEEeEeccCC-eEE
Q 004994 438 YTNSFSEGNFIGEGLLGSVYKAE-LPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLR-HGNIVELIGYCNEHG-QHL 514 (720)
Q Consensus 438 ~~~~~~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~~~~~~~~-~~~ 514 (720)
+.++|...+.||.|+||.||+|+ ..+|..||||++++..... ..-.=++|++.|+++. |||||++.+++.+.+ .+|
T Consensus 8 ~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~-ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~ 86 (538)
T KOG0661|consen 8 FMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSW-EECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILY 86 (538)
T ss_pred HHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccH-HHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEe
Confidence 44677788999999999999994 5679999999998664332 2223368999999998 999999999999988 999
Q ss_pred EEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCC
Q 004994 515 LVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPL 594 (720)
Q Consensus 515 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~ 594 (720)
+|||||+. +|.++++++ .+.|+...+..|+.||.+||+|+|.. |+.|||+||+|||+.....+||+|||+||.
T Consensus 87 fVfE~Md~-NLYqLmK~R---~r~fse~~irnim~QilqGL~hiHk~---GfFHRDlKPENiLi~~~~~iKiaDFGLARe 159 (538)
T KOG0661|consen 87 FVFEFMDC-NLYQLMKDR---NRLFSESDIRNIMYQILQGLAHIHKH---GFFHRDLKPENILISGNDVIKIADFGLARE 159 (538)
T ss_pred eeHHhhhh-hHHHHHhhc---CCcCCHHHHHHHHHHHHHHHHHHHhc---CcccccCChhheEecccceeEecccccccc
Confidence 99999985 999999754 67899999999999999999999987 999999999999999889999999999998
Q ss_pred CCCCCCcccccCccccccCCCCccC--CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcc--cccC---c
Q 004994 595 LFSGSTNELSEGLLTAHGSGAPEFE--SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAI--PRLH---D 667 (720)
Q Consensus 595 ~~~~~~~~~~~~~~~~~~~~aPE~~--~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~--~~~~---~ 667 (720)
+.... -......|+||+|||++ ++.|+.+.|+||+|||++|+.+-++-|.+..+.+....+-.+. +.-. .
T Consensus 160 v~Skp---PYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~e 236 (538)
T KOG0661|consen 160 VRSKP---PYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPE 236 (538)
T ss_pred cccCC---CcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchh
Confidence 75432 23456789999999998 7889999999999999999999999998766544433322221 1111 1
Q ss_pred hhhhhhhcCCCCC---ch----hhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 668 IDALSRMVDPSLD---GA----YLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 668 ~~~~~~~~~~~~~---~~----~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
...+...+.-.++ +. ....++.++.+++.+|+.+||.+|||++|++++
T Consensus 237 g~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 237 GYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQH 291 (538)
T ss_pred HHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence 1122222222221 11 112256788999999999999999999999875
No 17
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=5.4e-42 Score=354.95 Aligned_cols=252 Identities=23% Similarity=0.330 Sum_probs=207.5
Q ss_pred HHhcCCCCCCeeccCCCceEEEE-EeCCCcEEEEEEecccccc-cccHHHHHHHHHHHHcc-CCCceeEEEeEeccCCeE
Q 004994 437 QYTNSFSEGNFIGEGLLGSVYKA-ELPGGKLLAVKKLSNTVSQ-RQTDEEFLELASTISRL-RHGNIVELIGYCNEHGQH 513 (720)
Q Consensus 437 ~~~~~~~~~~~lg~G~~g~Vy~~-~~~~g~~vavK~l~~~~~~-~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~ 513 (720)
+--++|..++.||+|+|++||+| +.++++.||||++.+...- ....+....|-++|.+| .||.||+|+..|.+...+
T Consensus 70 k~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sL 149 (604)
T KOG0592|consen 70 KTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESL 149 (604)
T ss_pred CChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccce
Confidence 34468999999999999999999 5567999999999765332 23345667888889999 899999999999999999
Q ss_pred EEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCC
Q 004994 514 LLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAP 593 (720)
Q Consensus 514 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~ 593 (720)
|+|+||+++|+|.++++. ...|+......++.+|..||+|||.. |||||||||+|||||+|+++||+|||.|+
T Consensus 150 YFvLe~A~nGdll~~i~K----~Gsfde~caR~YAAeIldAleylH~~---GIIHRDlKPENILLd~dmhikITDFGsAK 222 (604)
T KOG0592|consen 150 YFVLEYAPNGDLLDLIKK----YGSFDETCARFYAAEILDALEYLHSN---GIIHRDLKPENILLDKDGHIKITDFGSAK 222 (604)
T ss_pred EEEEEecCCCcHHHHHHH----hCcchHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeEcCCCcEEEeeccccc
Confidence 999999999999999964 35788888889999999999999998 99999999999999999999999999999
Q ss_pred CCCCCCCc---------ccc--cCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhc
Q 004994 594 LLFSGSTN---------ELS--EGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWA 661 (720)
Q Consensus 594 ~~~~~~~~---------~~~--~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~ 661 (720)
.+.+.... ... ..+.||..|.+||++ .+..+..+|+|+||||+|+|+.|++||...++-.
T Consensus 223 ~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Neyl-------- 294 (604)
T KOG0592|consen 223 ILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYL-------- 294 (604)
T ss_pred cCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHH--------
Confidence 98653221 111 347899999999999 5678999999999999999999999997654321
Q ss_pred ccccCchhhhhhhc--CCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 662 IPRLHDIDALSRMV--DPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 662 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.+.+++ +..+... .++.+.+|+.+.|..||.+|+|.+||-+|
T Consensus 295 --------iFqkI~~l~y~fp~~----fp~~a~dLv~KLLv~dp~~Rlt~~qIk~H 338 (604)
T KOG0592|consen 295 --------IFQKIQALDYEFPEG----FPEDARDLIKKLLVRDPSDRLTSQQIKAH 338 (604)
T ss_pred --------HHHHHHHhcccCCCC----CCHHHHHHHHHHHccCccccccHHHHhhC
Confidence 122222 2222222 23567899999999999999999998775
No 18
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=6.2e-42 Score=358.55 Aligned_cols=266 Identities=27% Similarity=0.420 Sum_probs=210.9
Q ss_pred HHHHHHhcCCCCCCeeccCCCceEEEEEeCCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCe
Q 004994 433 ASLQQYTNSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQ 512 (720)
Q Consensus 433 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~ 512 (720)
++.....+.+..++.||+|.||+||||.+.+ .||||++..........+.|..|+..+++-+|.||+-+.|||...+.
T Consensus 385 ~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG--dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~ 462 (678)
T KOG0193|consen 385 EEWEIPPEEVLLGERIGSGSFGTVYRGRWHG--DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL 462 (678)
T ss_pred cccccCHHHhhccceeccccccceeeccccc--ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce
Confidence 4444445566678999999999999998754 59999998766556677899999999999999999999999998877
Q ss_pred EEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCC
Q 004994 513 HLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLA 592 (720)
Q Consensus 513 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla 592 (720)
.||+.+|++-+|+.++|-.+ ..|+..+.+.||.|+|+|+.|||.. +|||||||..||++++++.|||+|||++
T Consensus 463 -AIiTqwCeGsSLY~hlHv~e---tkfdm~~~idIAqQiaqGM~YLHAK---~IIHrDLKSnNIFl~~~~kVkIgDFGLa 535 (678)
T KOG0193|consen 463 -AIITQWCEGSSLYTHLHVQE---TKFDMNTTIDIAQQIAQGMDYLHAK---NIIHRDLKSNNIFLHEDLKVKIGDFGLA 535 (678)
T ss_pred -eeeehhccCchhhhhccchh---hhhhHHHHHHHHHHHHHhhhhhhhh---hhhhhhccccceEEccCCcEEEecccce
Confidence 99999999999999998543 5688889999999999999999998 9999999999999999999999999998
Q ss_pred CCCCCCCCcccccCccccccCCCCccC----CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCch
Q 004994 593 PLLFSGSTNELSEGLLTAHGSGAPEFE----SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDI 668 (720)
Q Consensus 593 ~~~~~~~~~~~~~~~~~~~~~~aPE~~----~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~ 668 (720)
..-.............+..-|||||++ ..+|+..+||||||+|+|||+||..||.....+ .+.|.+.+
T Consensus 536 tvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~d----qIifmVGr---- 607 (678)
T KOG0193|consen 536 TVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRD----QIIFMVGR---- 607 (678)
T ss_pred eeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChh----heEEEecc----
Confidence 654222111122233456779999987 235999999999999999999999999843221 12222111
Q ss_pred hhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhC
Q 004994 669 DALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCMI 720 (720)
Q Consensus 669 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~ 720 (720)
....+.+. ..-..++.++.+|+..||..++++||.+.+|+..|++++
T Consensus 608 ----G~l~pd~s-~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~ 654 (678)
T KOG0193|consen 608 ----GYLMPDLS-KIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELL 654 (678)
T ss_pred ----cccCccch-hhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhh
Confidence 00001110 112345678999999999999999999999999998874
No 19
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=3.6e-41 Score=360.34 Aligned_cols=262 Identities=24% Similarity=0.391 Sum_probs=201.8
Q ss_pred hcCCCCCCeeccCCCceEEEEEe------CCCcEEEEEEecccccccccHHHHHHHHHHHHcc-CCCceeEEEeEeccC-
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAEL------PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRL-RHGNIVELIGYCNEH- 510 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~------~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~- 510 (720)
.++|...+.||+|+||.||+|.. .+++.||||++.... .....+.+.+|++++.++ +|||||+++++|...
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 84 (338)
T cd05102 6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGA-TASEHKALMSELKILIHIGNHLNVVNLLGACTKPN 84 (338)
T ss_pred hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheecccccc-chHHHHHHHHHHHHHHHhccCcceeeEEeEecCCC
Confidence 35788889999999999999963 235689999997532 223446789999999999 899999999988764
Q ss_pred CeEEEEEeeCCCCCHHHHhhccchh-------------------------------------------------------
Q 004994 511 GQHLLVYDYGGNCTLHDLLHSDEEA------------------------------------------------------- 535 (720)
Q Consensus 511 ~~~~lv~e~~~~gsL~~~l~~~~~~------------------------------------------------------- 535 (720)
+..++||||+++|+|.+++......
T Consensus 85 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (338)
T cd05102 85 GPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETD 164 (338)
T ss_pred CceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhcc
Confidence 4688999999999999998642110
Q ss_pred ---ccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCCCcccccCcccccc
Q 004994 536 ---HKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHG 612 (720)
Q Consensus 536 ---~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~ 612 (720)
...+++....+++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++.+.............++..
T Consensus 165 ~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~ 241 (338)
T cd05102 165 DLWKSPLTMEDLICYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLK 241 (338)
T ss_pred ccccCCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCcc
Confidence 13478888999999999999999987 999999999999999999999999999987643322222222345678
Q ss_pred CCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcccccCchhhhhhhcCCCCCchhhHHHHHH
Q 004994 613 SGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDGAYLAKSLSR 690 (720)
Q Consensus 613 ~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 690 (720)
|+|||.+ ...++.++|||||||++|||++ |+.||........ ... .+.+.. ....+...+.+
T Consensus 242 y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~--~~~-------------~~~~~~-~~~~~~~~~~~ 305 (338)
T cd05102 242 WMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEE--FCQ-------------RLKDGT-RMRAPENATPE 305 (338)
T ss_pred ccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHH--HHH-------------HHhcCC-CCCCCCCCCHH
Confidence 9999987 5678999999999999999997 9999975332110 000 000000 00011223457
Q ss_pred HHHHHHHHhccCCCCCCCHHHHHHHHHhhC
Q 004994 691 FADIISRCVQWEPGFRPPMSEIVQDLLCMI 720 (720)
Q Consensus 691 l~~l~~~cl~~dP~~RPt~~evl~~L~~~~ 720 (720)
+.+++.+||+.||++|||+.|+++.|++++
T Consensus 306 l~~li~~cl~~dp~~RPs~~el~~~l~~~~ 335 (338)
T cd05102 306 IYRIMLACWQGDPKERPTFSALVEILGDLL 335 (338)
T ss_pred HHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 889999999999999999999999999874
No 20
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-41 Score=345.76 Aligned_cols=254 Identities=28% Similarity=0.409 Sum_probs=199.1
Q ss_pred cCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCC--eEEEE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHG--QHLLV 516 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~--~~~lv 516 (720)
.+|..++.||+|+||.||++.. ++|...|||.+..... ...+.+.+|+.+|++++|||||+++|...... .+++.
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~--~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~ 94 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDS--PTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIF 94 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccc--hhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEee
Confidence 3566789999999999999965 4599999999865421 11567899999999999999999999855444 68999
Q ss_pred EeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcC-CCCeEEccccCCCCC
Q 004994 517 YDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDE-KLIVRVSDCGLAPLL 595 (720)
Q Consensus 517 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~-~~~~kl~DFGla~~~ 595 (720)
|||+++|+|.+++.... . .++.....+++.++++||.|||+. +||||||||+|||++. ++.+||+|||+++..
T Consensus 95 mEy~~~GsL~~~~~~~g--~-~l~E~~v~~ytr~iL~GL~ylHs~---g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~ 168 (313)
T KOG0198|consen 95 MEYAPGGSLSDLIKRYG--G-KLPEPLVRRYTRQILEGLAYLHSK---GIVHCDIKPANILLDPSNGDVKLADFGLAKKL 168 (313)
T ss_pred eeccCCCcHHHHHHHcC--C-CCCHHHHHHHHHHHHHHHHHHHhC---CEeccCcccceEEEeCCCCeEEeccCcccccc
Confidence 99999999999996432 1 689999999999999999999986 9999999999999999 799999999999877
Q ss_pred CC-CCCcccccCccccccCCCCccCC-CCC-CCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhh
Q 004994 596 FS-GSTNELSEGLLTAHGSGAPEFES-GSY-SCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALS 672 (720)
Q Consensus 596 ~~-~~~~~~~~~~~~~~~~~aPE~~~-~~~-~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (720)
.. ...........||+.|||||... +.. ..++|||||||++.||+||+.||.... .....+....
T Consensus 169 ~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~-~~~~~~~~ig----------- 236 (313)
T KOG0198|consen 169 ESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFF-EEAEALLLIG----------- 236 (313)
T ss_pred ccccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhc-chHHHHHHHh-----------
Confidence 53 11122334578999999999996 433 349999999999999999999997520 0001011100
Q ss_pred hhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q 004994 673 RMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDL 716 (720)
Q Consensus 673 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L 716 (720)
... .....+...+.+..+++.+|+++||++||||+|++++.
T Consensus 237 --~~~-~~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hp 277 (313)
T KOG0198|consen 237 --RED-SLPEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHP 277 (313)
T ss_pred --ccC-CCCCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhCh
Confidence 000 00122333456788999999999999999999999874
No 21
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-41 Score=355.36 Aligned_cols=248 Identities=22% Similarity=0.365 Sum_probs=207.9
Q ss_pred cCCCCCCeeccCCCceEEEE-EeCCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEe
Q 004994 440 NSFSEGNFIGEGLLGSVYKA-ELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYD 518 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~-~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 518 (720)
..|.....||+|+.|.||.| +..+++.||||++.... ....+-...|+.+|+..+|+|||.+++.|...+++|+|||
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~--Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVME 350 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRK--QPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVME 350 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEecc--CCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEe
Confidence 45667788999999999999 56678999999997543 3344567899999999999999999999988899999999
Q ss_pred eCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCC
Q 004994 519 YGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSG 598 (720)
Q Consensus 519 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~ 598 (720)
||++|+|.|++.. ..+++.++..|+.++++||+|||.. +|+|||||.+|||++.+|.+||+|||++..+...
T Consensus 351 ym~ggsLTDvVt~-----~~~~E~qIA~Icre~l~aL~fLH~~---gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~ 422 (550)
T KOG0578|consen 351 YMEGGSLTDVVTK-----TRMTEGQIAAICREILQGLKFLHAR---GIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEE 422 (550)
T ss_pred ecCCCchhhhhhc-----ccccHHHHHHHHHHHHHHHHHHHhc---ceeeeccccceeEeccCCcEEEeeeeeeeccccc
Confidence 9999999999853 3488899999999999999999998 9999999999999999999999999999887544
Q ss_pred CCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhh-hcccccCchhhhhhhcC
Q 004994 599 STNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVR-WAIPRLHDIDALSRMVD 676 (720)
Q Consensus 599 ~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 676 (720)
.. ......||++|||||.. ...|++|+||||||++++||+-|++||-..++-....++. -..+.+
T Consensus 423 ~~--KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~ng~P~l----------- 489 (550)
T KOG0578|consen 423 QS--KRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPKL----------- 489 (550)
T ss_pred cC--ccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhhcCCCCc-----------
Confidence 33 34557899999999999 5579999999999999999999999997655433222111 111111
Q ss_pred CCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 677 PSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 677 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
..++..+.+|.+|+.+||+.|+++|+++.|+|+|
T Consensus 490 -----k~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~H 523 (550)
T KOG0578|consen 490 -----KNPEKLSPELKDFLDRCLVVDVEQRASAKELLEH 523 (550)
T ss_pred -----CCccccCHHHHHHHHHHhhcchhcCCCHHHHhcC
Confidence 2344556789999999999999999999999976
No 22
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.8e-41 Score=338.25 Aligned_cols=263 Identities=21% Similarity=0.320 Sum_probs=208.3
Q ss_pred hcCCCCCCeeccCCCceEEEEE-eCCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEE
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAE-LPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVY 517 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 517 (720)
.+.|+..++||.|..++||+|. .+.+..||||++.-+.... +...+++|+..|+.++||||++++..|..+..+|+||
T Consensus 25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~-~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVm 103 (516)
T KOG0582|consen 25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNN-DLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVM 103 (516)
T ss_pred ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhh-hHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEee
Confidence 3578888999999999999995 5678999999997654433 3678999999999999999999999999999999999
Q ss_pred eeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCC
Q 004994 518 DYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFS 597 (720)
Q Consensus 518 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~ 597 (720)
.||.+||+.+++.... ...+++..+..|..++.+||.|||+. |.||||||+.|||||.+|.|||+|||.+..+..
T Consensus 104 pfMa~GS~ldIik~~~--~~Gl~E~~Ia~iLre~LkaL~YLH~~---G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~ 178 (516)
T KOG0582|consen 104 PFMAGGSLLDIIKTYY--PDGLEEASIATILREVLKALDYLHQN---GHIHRDVKAGNILIDSDGTVKLADFGVSASLFD 178 (516)
T ss_pred hhhcCCcHHHHHHHHc--cccccHHHHHHHHHHHHHHHHHHHhc---CceecccccccEEEcCCCcEEEcCceeeeeecc
Confidence 9999999999997532 34588888999999999999999998 999999999999999999999999999876655
Q ss_pred CCCc-ccc-cCccccccCCCCccCC---CCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhh
Q 004994 598 GSTN-ELS-EGLLTAHGSGAPEFES---GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALS 672 (720)
Q Consensus 598 ~~~~-~~~-~~~~~~~~~~aPE~~~---~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (720)
.... ... ....+++.|||||.+. ..|+.|+||||||+...||.+|..||....+.... .. .+.......
T Consensus 179 ~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvL--l~----tLqn~pp~~ 252 (516)
T KOG0582|consen 179 SGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVL--LL----TLQNDPPTL 252 (516)
T ss_pred cCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHH--HH----HhcCCCCCc
Confidence 4322 222 4567899999999952 35999999999999999999999999765432211 00 000000000
Q ss_pred hhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 673 RMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 673 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
. -..+...........|++++..||++||++|||+++++++
T Consensus 253 ~--t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh 293 (516)
T KOG0582|consen 253 L--TSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKH 293 (516)
T ss_pred c--cccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhcc
Confidence 0 0011112223344589999999999999999999999864
No 23
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.5e-41 Score=378.91 Aligned_cols=259 Identities=25% Similarity=0.416 Sum_probs=213.9
Q ss_pred CCCCCCeeccCCCceEEEEEeCC--Cc----EEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEE
Q 004994 441 SFSEGNFIGEGLLGSVYKAELPG--GK----LLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHL 514 (720)
Q Consensus 441 ~~~~~~~lg~G~~g~Vy~~~~~~--g~----~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~ 514 (720)
..+..+.||+|+||.||+|...+ |. .||||.+++. .+.+...+|.+|..+|++++|||||+++|+|.+.+..+
T Consensus 693 ~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~-~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~ 771 (1025)
T KOG1095|consen 693 NVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRL-SSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPL 771 (1025)
T ss_pred heEeeeeeccccccceEEEEEecCCCCccceEEEEEecccc-CCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcE
Confidence 44456899999999999997643 43 4899999754 34567789999999999999999999999999999999
Q ss_pred EEEeeCCCCCHHHHhhccc---hhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccC
Q 004994 515 LVYDYGGNCTLHDLLHSDE---EAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGL 591 (720)
Q Consensus 515 lv~e~~~~gsL~~~l~~~~---~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGl 591 (720)
+++|||++|+|..++++.. .....++....+.++.|||+|+.||++. ++|||||.++|+||+..+.|||+|||+
T Consensus 772 i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~---~fvHRDLAaRNCLL~~~r~VKIaDFGl 848 (1025)
T KOG1095|consen 772 ILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESK---HFVHRDLAARNCLLDERRVVKIADFGL 848 (1025)
T ss_pred EEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhC---CCcCcchhhhheeecccCcEEEcccch
Confidence 9999999999999997642 1245688889999999999999999998 899999999999999999999999999
Q ss_pred CCCCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcccccCchh
Q 004994 592 APLLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDID 669 (720)
Q Consensus 592 a~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 669 (720)
|+.+...++........-...|||||.+ .+.|+.|+|||||||+|||++| |..||...+..+..
T Consensus 849 ArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~-------------- 914 (1025)
T KOG1095|consen 849 ARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVL-------------- 914 (1025)
T ss_pred hHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHH--------------
Confidence 9987766655544443345689999998 6899999999999999999999 99999765432211
Q ss_pred hhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhC
Q 004994 670 ALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCMI 720 (720)
Q Consensus 670 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~ 720 (720)
..+.... .-..+..+++.+.++|..||+.+|++||++..+++.+..++
T Consensus 915 --~~~~~gg-RL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~ 962 (1025)
T KOG1095|consen 915 --LDVLEGG-RLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAIS 962 (1025)
T ss_pred --HHHHhCC-ccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhh
Confidence 1111111 11234567788999999999999999999999999887653
No 24
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=8e-41 Score=326.69 Aligned_cols=267 Identities=24% Similarity=0.294 Sum_probs=205.9
Q ss_pred cCCCCCCeeccCCCceEEEEE-eCCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEecc--CCeEEEE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAE-LPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNE--HGQHLLV 516 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~--~~~~~lv 516 (720)
+.|+..+.|++|+||.||+|+ ..+++.||+|+++.+.......---++|+.+|.+++|||||.+.++... -+..|+|
T Consensus 76 ~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~V 155 (419)
T KOG0663|consen 76 EEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIV 155 (419)
T ss_pred HHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeee
Confidence 346667889999999999994 5679999999998776556666677899999999999999999997754 4679999
Q ss_pred EeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCC
Q 004994 517 YDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLF 596 (720)
Q Consensus 517 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~ 596 (720)
||||+. +|..+++.. ..+|...+...++.|+.+|++|||.. .|+|||||++|+|+...|.+||+|||+|+.+.
T Consensus 156 Me~~Eh-DLksl~d~m---~q~F~~~evK~L~~QlL~glk~lH~~---wilHRDLK~SNLLm~~~G~lKiaDFGLAR~yg 228 (419)
T KOG0663|consen 156 MEYVEH-DLKSLMETM---KQPFLPGEVKTLMLQLLRGLKHLHDN---WILHRDLKTSNLLLSHKGILKIADFGLAREYG 228 (419)
T ss_pred HHHHHh-hHHHHHHhc---cCCCchHHHHHHHHHHHHHHHHHhhc---eeEecccchhheeeccCCcEEecccchhhhhc
Confidence 999998 899888643 36788899999999999999999997 89999999999999999999999999999885
Q ss_pred CCCCcccccCccccccCCCCccC--CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhh--------hcccccC
Q 004994 597 SGSTNELSEGLLTAHGSGAPEFE--SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVR--------WAIPRLH 666 (720)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~aPE~~--~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~--------~~~~~~~ 666 (720)
..-. -.....-|.||+|||.+ ...|+..+|+||+|||+.||+++++-|.+..+.+..+.+- ..++.+.
T Consensus 229 sp~k--~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~ 306 (419)
T KOG0663|consen 229 SPLK--PYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYS 306 (419)
T ss_pred CCcc--cCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCcc
Confidence 4422 22345668999999998 4469999999999999999999999887654433222110 0111111
Q ss_pred chhhhh-----hhcCCCCCchhhHH-HHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 667 DIDALS-----RMVDPSLDGAYLAK-SLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 667 ~~~~~~-----~~~~~~~~~~~~~~-~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
...... ......+...+... ..+.-.+|+...|..||.+|.|++|.+++
T Consensus 307 ~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h 361 (419)
T KOG0663|consen 307 ELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKH 361 (419)
T ss_pred ccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcc
Confidence 111110 00001112222222 34667899999999999999999999865
No 25
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.9e-41 Score=331.70 Aligned_cols=268 Identities=21% Similarity=0.333 Sum_probs=211.1
Q ss_pred hcCCCCCCeeccCCCceEEEE-EeCCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEecc-----CCe
Q 004994 439 TNSFSEGNFIGEGLLGSVYKA-ELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNE-----HGQ 512 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~-~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~-----~~~ 512 (720)
...|...+.||+|+||.|..+ ...+|+.||||++..........++-.+|+++++.++|+||+.+++.+.. -..
T Consensus 21 ~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~D 100 (359)
T KOG0660|consen 21 PRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFND 100 (359)
T ss_pred cceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccce
Confidence 345555788999999999999 45689999999998777667778889999999999999999999998854 347
Q ss_pred EEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCC
Q 004994 513 HLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLA 592 (720)
Q Consensus 513 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla 592 (720)
.|+|+|+|+ .+|..+++. ...++.....-++.|+.+||.|+|+. +|+||||||+|+|++.+..+||+|||+|
T Consensus 101 vYiV~elMe-tDL~~iik~----~~~L~d~H~q~f~YQiLrgLKyiHSA---nViHRDLKPsNll~n~~c~lKI~DFGLA 172 (359)
T KOG0660|consen 101 VYLVFELME-TDLHQIIKS----QQDLTDDHAQYFLYQILRGLKYIHSA---NVIHRDLKPSNLLLNADCDLKICDFGLA 172 (359)
T ss_pred eEEehhHHh-hHHHHHHHc----CccccHHHHHHHHHHHHHhcchhhcc---cccccccchhheeeccCCCEEeccccce
Confidence 899999995 489998864 34477888888999999999999998 9999999999999999999999999999
Q ss_pred CCCCCCCCcccccCccccccCCCCccC--CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhh
Q 004994 593 PLLFSGSTNELSEGLLTAHGSGAPEFE--SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDA 670 (720)
Q Consensus 593 ~~~~~~~~~~~~~~~~~~~~~~aPE~~--~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~ 670 (720)
+............+...|.||+|||.. ...|+...||||.|||+.||++|++-|.+.+......++....+.. +.+.
T Consensus 173 R~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP-~~e~ 251 (359)
T KOG0660|consen 173 RYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTP-SEED 251 (359)
T ss_pred eeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCC-CHHH
Confidence 988554333444567789999999987 5679999999999999999999999998766544333333322222 2222
Q ss_pred hhhhcC----------CCCCch----hhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 671 LSRMVD----------PSLDGA----YLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 671 ~~~~~~----------~~~~~~----~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
+..+-. |..+.. ......+...+|+.+||..||.+|+|++|+++|
T Consensus 252 l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~h 310 (359)
T KOG0660|consen 252 LQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAH 310 (359)
T ss_pred HHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 222221 111110 011234577899999999999999999999875
No 26
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=6e-41 Score=346.79 Aligned_cols=248 Identities=24% Similarity=0.369 Sum_probs=208.6
Q ss_pred cCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEe
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYD 518 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 518 (720)
++|.+.+.||+|+||+||||+. .+.+.||+|.+.+.....++.+...+|++++++++|||||.++++|+...+.++|+|
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte 81 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE 81 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence 4677788999999999999954 578999999998776666677889999999999999999999999999999999999
Q ss_pred eCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCC
Q 004994 519 YGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSG 598 (720)
Q Consensus 519 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~ 598 (720)
|+.+ +|+.++.. ...+++.....|+.++..||.|||+. +|+|||+||.|||++..+.+|+||||+|+.+..
T Consensus 82 ~a~g-~L~~il~~----d~~lpEe~v~~~a~~LVsaL~yLhs~---rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~- 152 (808)
T KOG0597|consen 82 YAVG-DLFTILEQ----DGKLPEEQVRAIAYDLVSALYYLHSN---RILHRDMKPQNILLEKGGTLKLCDFGLARAMST- 152 (808)
T ss_pred hhhh-hHHHHHHh----ccCCCHHHHHHHHHHHHHHHHHHHhc---CcccccCCcceeeecCCCceeechhhhhhhccc-
Confidence 9987 99999954 45688899999999999999999998 999999999999999999999999999998754
Q ss_pred CCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcCC
Q 004994 599 STNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDP 677 (720)
Q Consensus 599 ~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (720)
...+...+.||+.|||||.. .+.|+..+|.||+|||+||+++|++||-... ...+++.. .. |+
T Consensus 153 -~t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~s---i~~Lv~~I---~~---------d~ 216 (808)
T KOG0597|consen 153 -NTSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARS---ITQLVKSI---LK---------DP 216 (808)
T ss_pred -CceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHH---HHHHHHHH---hc---------CC
Confidence 23345567899999999998 6689999999999999999999999995321 11111110 00 11
Q ss_pred CCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 678 SLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 678 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
. ..+......+..++...|.+||.+|.|..+++.|
T Consensus 217 v---~~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~H 251 (808)
T KOG0597|consen 217 V---KPPSTASSSFVNFLQGLLIKDPAQRLTWTDLLGH 251 (808)
T ss_pred C---CCcccccHHHHHHHHHHhhcChhhcccHHHHhcC
Confidence 1 1233556789999999999999999999998865
No 27
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=1.5e-39 Score=338.50 Aligned_cols=247 Identities=19% Similarity=0.275 Sum_probs=196.7
Q ss_pred CCeeccCCCceEEEEEeCCCcEEEEEEeccccccc-ccHHHHHHHHHHHHccCCCceeEEEeEecc----CCeEEEEEee
Q 004994 445 GNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQR-QTDEEFLELASTISRLRHGNIVELIGYCNE----HGQHLLVYDY 519 (720)
Q Consensus 445 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~~~~~~----~~~~~lv~e~ 519 (720)
...|++|++|.||+|.. +|+.||||+++...... ...+.|.+|++++++++|||||+++|++.+ ....++||||
T Consensus 25 ~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey 103 (283)
T PHA02988 25 SVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEY 103 (283)
T ss_pred CeEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEe
Confidence 36799999999999987 68899999997543222 224678899999999999999999999866 3478899999
Q ss_pred CCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCC
Q 004994 520 GGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGS 599 (720)
Q Consensus 520 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~ 599 (720)
+++|+|.+++.. ...++|....+++.+++.||.|||... +++||||||+|||+++++.+||+|||+++.+....
T Consensus 104 ~~~g~L~~~l~~----~~~~~~~~~~~i~~~i~~~l~~lH~~~--~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~ 177 (283)
T PHA02988 104 CTRGYLREVLDK----EKDLSFKTKLDMAIDCCKGLYNLYKYT--NKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPP 177 (283)
T ss_pred CCCCcHHHHHhh----CCCCChhHHHHHHHHHHHHHHHHHhcC--CCCCCcCChhhEEECCCCcEEEcccchHhhhcccc
Confidence 999999999964 246889999999999999999999742 67899999999999999999999999998653321
Q ss_pred CcccccCccccccCCCCccCC---CCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcC
Q 004994 600 TNELSEGLLTAHGSGAPEFES---GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVD 676 (720)
Q Consensus 600 ~~~~~~~~~~~~~~~aPE~~~---~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (720)
....++..|+|||... +.++.++|||||||++|||+||+.||......... .. +..
T Consensus 178 -----~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~---~~-------------i~~ 236 (283)
T PHA02988 178 -----FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIY---DL-------------IIN 236 (283)
T ss_pred -----ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHH---HH-------------HHh
Confidence 1234678899999984 47899999999999999999999999754322111 10 000
Q ss_pred CCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 677 PSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 677 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
.......+..++.++.+++.+||+.||++|||++|+++.|+.+
T Consensus 237 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~ 279 (283)
T PHA02988 237 KNNSLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLY 279 (283)
T ss_pred cCCCCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHH
Confidence 0000011123456789999999999999999999999999864
No 28
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=6e-40 Score=355.11 Aligned_cols=262 Identities=24% Similarity=0.345 Sum_probs=203.1
Q ss_pred hcCCCCCCeeccCCCceEEEEEe------CCCcEEEEEEecccccccccHHHHHHHHHHHHcc-CCCceeEEEeEeccCC
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAEL------PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRL-RHGNIVELIGYCNEHG 511 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~------~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~ 511 (720)
.++|...+.||+|+||+||+|.. .++..||||+++.... ....+.+.+|+++++.+ +|||||+++++|.+.+
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~-~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~ 112 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAH-LTEREALMSELKVLSYLGNHINIVNLLGACTVGG 112 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcC-cHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCC
Confidence 34678889999999999999953 2466899999974432 23456788999999999 8999999999999999
Q ss_pred eEEEEEeeCCCCCHHHHhhccch---------------------------------------------------------
Q 004994 512 QHLLVYDYGGNCTLHDLLHSDEE--------------------------------------------------------- 534 (720)
Q Consensus 512 ~~~lv~e~~~~gsL~~~l~~~~~--------------------------------------------------------- 534 (720)
..++||||+++|+|.++++....
T Consensus 113 ~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (375)
T cd05104 113 PTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSG 192 (375)
T ss_pred cceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccc
Confidence 99999999999999999864211
Q ss_pred --------------hccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCCC
Q 004994 535 --------------AHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGST 600 (720)
Q Consensus 535 --------------~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~~ 600 (720)
....++|....+++.++++||+|||+. +|+||||||+|||+++++.+||+|||+++.+.....
T Consensus 193 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 269 (375)
T cd05104 193 SYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIRNDSN 269 (375)
T ss_pred eecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCchhhEEEECCCcEEEecCccceeccCccc
Confidence 012478889999999999999999987 999999999999999999999999999987643322
Q ss_pred cccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcccccCchhhhhhhcCCC
Q 004994 601 NELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPS 678 (720)
Q Consensus 601 ~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (720)
........++..|+|||.. ...++.++|||||||++|||++ |..||....... ...+.. ...
T Consensus 270 ~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~--~~~~~~--------------~~~ 333 (375)
T cd05104 270 YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDS--KFYKMI--------------KEG 333 (375)
T ss_pred ccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchH--HHHHHH--------------HhC
Confidence 2222223345679999998 5578999999999999999998 899986532211 111110 000
Q ss_pred CCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhC
Q 004994 679 LDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCMI 720 (720)
Q Consensus 679 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~ 720 (720)
.....+...+.++.+++.+||+.||++|||+.||++.|++.|
T Consensus 334 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~~ 375 (375)
T cd05104 334 YRMLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQL 375 (375)
T ss_pred ccCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhhC
Confidence 000011112357889999999999999999999999999865
No 29
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=5.5e-41 Score=359.03 Aligned_cols=254 Identities=24% Similarity=0.387 Sum_probs=208.9
Q ss_pred CCCCeeccCCCceEEEEEeCC----CcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEe
Q 004994 443 SEGNFIGEGLLGSVYKAELPG----GKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYD 518 (720)
Q Consensus 443 ~~~~~lg~G~~g~Vy~~~~~~----g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 518 (720)
.+.++||.|.||+||+|+++- ...||||.++.... .+...+|+.|+.||.+++||||++|.|+.......+||+|
T Consensus 632 ~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~Gyt-ekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiTE 710 (996)
T KOG0196|consen 632 KIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYT-EKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIITE 710 (996)
T ss_pred EEEEEEecccccceecccccCCCCcceeEEEeeeccCcc-HHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEEhh
Confidence 356899999999999997742 45799999986544 4556799999999999999999999999999999999999
Q ss_pred eCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCC
Q 004994 519 YGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSG 598 (720)
Q Consensus 519 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~ 598 (720)
||+||+|..+|+..+ ..|++.+...+..+||.|+.||-+. ++|||||.++|||++.+...||+|||++|.+.++
T Consensus 711 yMENGsLDsFLR~~D---GqftviQLVgMLrGIAsGMkYLsdm---~YVHRDLAARNILVNsnLvCKVsDFGLSRvledd 784 (996)
T KOG0196|consen 711 YMENGSLDSFLRQND---GQFTVIQLVGMLRGIASGMKYLSDM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD 784 (996)
T ss_pred hhhCCcHHHHHhhcC---CceEeehHHHHHHHHHHHhHHHhhc---CchhhhhhhhheeeccceEEEeccccceeecccC
Confidence 999999999998654 4589999999999999999999988 9999999999999999999999999999988654
Q ss_pred CCc-ccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcccccCchhhhhhhc
Q 004994 599 STN-ELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMV 675 (720)
Q Consensus 599 ~~~-~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (720)
... ..+.+-.-...|.|||.+ ..+++.++|||||||||||+++ |+.||.+....+. + . .+
T Consensus 785 ~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdV---I-------------k-aI 847 (996)
T KOG0196|consen 785 PEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDV---I-------------K-AI 847 (996)
T ss_pred CCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHHH---H-------------H-HH
Confidence 321 111111113568999998 6789999999999999999887 9999965432221 1 1 11
Q ss_pred CCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhC
Q 004994 676 DPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCMI 720 (720)
Q Consensus 676 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~ 720 (720)
+....-.-+.+++..+.+||..||++|-.+||++.+|+..|.+||
T Consensus 848 e~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklI 892 (996)
T KOG0196|consen 848 EQGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLI 892 (996)
T ss_pred HhccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHh
Confidence 111111234567889999999999999999999999999999986
No 30
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=7.5e-40 Score=354.00 Aligned_cols=261 Identities=24% Similarity=0.378 Sum_probs=202.5
Q ss_pred cCCCCCCeeccCCCceEEEEEe------CCCcEEEEEEecccccccccHHHHHHHHHHHHcc-CCCceeEEEeEeccCCe
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL------PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRL-RHGNIVELIGYCNEHGQ 512 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~------~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~ 512 (720)
++|...+.||+|+||.||+|.. .++..||||++..... ....+.+.+|+++++.+ +|+|||+++++|.+.+.
T Consensus 38 ~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~ 116 (374)
T cd05106 38 DNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAH-TDEREALMSELKILSHLGQHKNIVNLLGACTHGGP 116 (374)
T ss_pred HHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCC-HHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCC
Confidence 4688889999999999999853 2345799999975432 23346788999999999 89999999999999999
Q ss_pred EEEEEeeCCCCCHHHHhhccch----------------------------------------------------------
Q 004994 513 HLLVYDYGGNCTLHDLLHSDEE---------------------------------------------------------- 534 (720)
Q Consensus 513 ~~lv~e~~~~gsL~~~l~~~~~---------------------------------------------------------- 534 (720)
.++||||+++|+|.+++.....
T Consensus 117 ~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (374)
T cd05106 117 VLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSD 196 (374)
T ss_pred eEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccccc
Confidence 9999999999999998853211
Q ss_pred --------hccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCCCcccccC
Q 004994 535 --------AHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEG 606 (720)
Q Consensus 535 --------~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~~~~~~ 606 (720)
....+++....+++.|+++||+|||+. +|+||||||+|||+++++.+||+|||+++.+...........
T Consensus 197 ~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~ 273 (374)
T cd05106 197 SKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASK---NCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGN 273 (374)
T ss_pred ccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccC
Confidence 112478888999999999999999987 999999999999999999999999999986643322222222
Q ss_pred ccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcccccCchhhhhhhcCCCCCchhh
Q 004994 607 LLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDGAYL 684 (720)
Q Consensus 607 ~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 684 (720)
..++..|+|||.. .+.++.++|||||||++|||++ |+.||........ .. ..+........+
T Consensus 274 ~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~--~~--------------~~~~~~~~~~~~ 337 (374)
T cd05106 274 ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSK--FY--------------KMVKRGYQMSRP 337 (374)
T ss_pred CCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHH--HH--------------HHHHcccCccCC
Confidence 3345679999987 5679999999999999999997 9999965322110 00 000000000011
Q ss_pred HHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhC
Q 004994 685 AKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCMI 720 (720)
Q Consensus 685 ~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~ 720 (720)
...+.++.+++.+||+.||++|||+.+|++.|++++
T Consensus 338 ~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 338 DFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 112367889999999999999999999999999875
No 31
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-40 Score=350.20 Aligned_cols=254 Identities=26% Similarity=0.417 Sum_probs=203.5
Q ss_pred CCCCCCeeccCCCceEEEEEeCC--C--cE-EEEEEecc-cccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEE
Q 004994 441 SFSEGNFIGEGLLGSVYKAELPG--G--KL-LAVKKLSN-TVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHL 514 (720)
Q Consensus 441 ~~~~~~~lg~G~~g~Vy~~~~~~--g--~~-vavK~l~~-~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~ 514 (720)
+....++||+|+||+||+|.+.. + .. ||||..+. ....+....+|..|+++|++++|||||++||++.....++
T Consensus 158 ~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl~ 237 (474)
T KOG0194|consen 158 DIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPLM 237 (474)
T ss_pred CccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCccE
Confidence 33445899999999999996643 3 23 89999885 3345667789999999999999999999999999999999
Q ss_pred EEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCC
Q 004994 515 LVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPL 594 (720)
Q Consensus 515 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~ 594 (720)
+|||+|.||+|.++|.... ..++..++.+++.++|+||+|||+. ++|||||.++|+|++.++.+||+|||+++.
T Consensus 238 ivmEl~~gGsL~~~L~k~~---~~v~~~ek~~~~~~AA~Gl~YLh~k---~~IHRDIAARNcL~~~~~~vKISDFGLs~~ 311 (474)
T KOG0194|consen 238 LVMELCNGGSLDDYLKKNK---KSLPTLEKLRFCYDAARGLEYLHSK---NCIHRDIAARNCLYSKKGVVKISDFGLSRA 311 (474)
T ss_pred EEEEecCCCcHHHHHHhCC---CCCCHHHHHHHHHHHHhHHHHHHHC---CCcchhHhHHHheecCCCeEEeCccccccC
Confidence 9999999999999997532 3689999999999999999999998 999999999999999999999999999876
Q ss_pred CCCCCCccccc-CccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcccccCchhhh
Q 004994 595 LFSGSTNELSE-GLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDAL 671 (720)
Q Consensus 595 ~~~~~~~~~~~-~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (720)
-. ...... ...-...|+|||.+ .+.|+.++|||||||++||+++ |..||.+........
T Consensus 312 ~~---~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~--------------- 373 (474)
T KOG0194|consen 312 GS---QYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKA--------------- 373 (474)
T ss_pred Cc---ceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHHH---------------
Confidence 42 111111 12234679999998 7789999999999999999999 899997644322111
Q ss_pred hhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 672 SRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 672 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
.++........+...+.++..++.+||..+|++||+|.++.+.|+.+
T Consensus 374 -kI~~~~~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~ 420 (474)
T KOG0194|consen 374 -KIVKNGYRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEAL 420 (474)
T ss_pred -HHHhcCccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHH
Confidence 11011111111223456788999999999999999999999999875
No 32
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-39 Score=344.44 Aligned_cols=251 Identities=25% Similarity=0.351 Sum_probs=202.6
Q ss_pred HhcCCCCCCeeccCCCceEEEEE-eCCCcEEEEEEecccccc---cccHHHHHHHHHHHHccC-CCceeEEEeEeccCCe
Q 004994 438 YTNSFSEGNFIGEGLLGSVYKAE-LPGGKLLAVKKLSNTVSQ---RQTDEEFLELASTISRLR-HGNIVELIGYCNEHGQ 512 (720)
Q Consensus 438 ~~~~~~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~---~~~~~~~~~e~~~l~~l~-H~niv~l~~~~~~~~~ 512 (720)
....|..++.||+|+||+||.|. ..+|..||+|.+.+.... ....+...+|+.++++++ ||||+++++++.....
T Consensus 15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~ 94 (370)
T KOG0583|consen 15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTK 94 (370)
T ss_pred ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCe
Confidence 45688899999999999999995 457899999977654221 123456668999999999 9999999999999999
Q ss_pred EEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCC-CCeEEccccC
Q 004994 513 HLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEK-LIVRVSDCGL 591 (720)
Q Consensus 513 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~-~~~kl~DFGl 591 (720)
.++||||+.+|+|.+++.. ...+.+.....++.|++.|++|+|+. +|+||||||+|||+|.+ +++||+|||+
T Consensus 95 ~~ivmEy~~gGdL~~~i~~----~g~l~E~~ar~~F~Qlisav~y~H~~---gi~HRDLK~ENilld~~~~~~Kl~DFG~ 167 (370)
T KOG0583|consen 95 IYIVMEYCSGGDLFDYIVN----KGRLKEDEARKYFRQLISAVAYCHSR---GIVHRDLKPENILLDGNEGNLKLSDFGL 167 (370)
T ss_pred EEEEEEecCCccHHHHHHH----cCCCChHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEecCCCCCEEEecccc
Confidence 9999999999999999964 45677788999999999999999998 99999999999999999 9999999999
Q ss_pred CCCCCCCCCcccccCccccccCCCCccCCC-C-CC-CccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCch
Q 004994 592 APLLFSGSTNELSEGLLTAHGSGAPEFESG-S-YS-CQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDI 668 (720)
Q Consensus 592 a~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-~-~~-~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~ 668 (720)
+.... ..........|++.|+|||++.+ . |+ .++||||+||+||.|++|+.||++.........
T Consensus 168 s~~~~--~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~k----------- 234 (370)
T KOG0583|consen 168 SAISP--GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRK----------- 234 (370)
T ss_pred ccccC--CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHH-----------
Confidence 98773 22334556789999999999954 4 64 689999999999999999999986332111110
Q ss_pred hhhhhhcCCCCCchhhHHH-HHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 669 DALSRMVDPSLDGAYLAKS-LSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 669 ~~~~~~~~~~~~~~~~~~~-~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
+..... .++... ..++.+++.+||..||.+|+|+.|++++
T Consensus 235 -----i~~~~~--~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~h 275 (370)
T KOG0583|consen 235 -----IRKGEF--KIPSYLLSPEARSLIEKMLVPDPSTRITLLEILEH 275 (370)
T ss_pred -----HhcCCc--cCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHhhC
Confidence 010000 011111 4678899999999999999999999843
No 33
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=1.6e-39 Score=342.27 Aligned_cols=265 Identities=24% Similarity=0.361 Sum_probs=200.8
Q ss_pred cCCCCCCeeccCCCceEEEEEeCC-----------------CcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAELPG-----------------GKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVE 502 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~~~-----------------g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~ 502 (720)
++|...+.||+|+||.||+|...+ +..||+|.+.... ......+|.+|++++++++||||++
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~ 83 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDA-NKNARNDFLKEVKILSRLKDPNIIR 83 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCC-CHHHHHHHHHHHHHHhhcCCCCeeE
Confidence 467788999999999999996432 3479999987543 2334567999999999999999999
Q ss_pred EEeEeccCCeEEEEEeeCCCCCHHHHhhccch---------------hccccCHHHHHHHHHHHHHHHHHHHhcCCCCee
Q 004994 503 LIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEE---------------AHKKFSWNIRIRVALGAARALQYLQEVCEPPIV 567 (720)
Q Consensus 503 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~---------------~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~iv 567 (720)
+++++.+.+..++||||+++|+|.+++..... ....++|....+++.|+++||.|||+. +|+
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~iv 160 (304)
T cd05096 84 LLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSL---NFV 160 (304)
T ss_pred EEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC---Ccc
Confidence 99999999999999999999999998854211 123578889999999999999999987 899
Q ss_pred ecCCCCCCeEEcCCCCeEEccccCCCCCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh--CCC
Q 004994 568 HGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT--GRK 644 (720)
Q Consensus 568 HrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt--G~~ 644 (720)
||||||+|||+++++.+||+|||+++.+.............++..|+|||+. .+.++.++|||||||++|||++ +..
T Consensus 161 H~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~ 240 (304)
T cd05096 161 HRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQ 240 (304)
T ss_pred ccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCC
Confidence 9999999999999999999999999876443322222233446789999987 5679999999999999999987 567
Q ss_pred CCCCCCCccccchhhhcccccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q 004994 645 PYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLC 718 (720)
Q Consensus 645 Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 718 (720)
||....... ............. .......+..++..+.+++.+||+.||++|||++||.+.|++
T Consensus 241 p~~~~~~~~---~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~~ 304 (304)
T cd05096 241 PYGELTDEQ---VIENAGEFFRDQG-------RQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLTE 304 (304)
T ss_pred CCCcCCHHH---HHHHHHHHhhhcc-------ccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHhC
Confidence 776432211 1111100000000 000000111234678899999999999999999999999874
No 34
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.7e-40 Score=347.17 Aligned_cols=249 Identities=25% Similarity=0.344 Sum_probs=205.4
Q ss_pred cCCCCCCeeccCCCceEEEEE-eCCCcEEEEEEecccc-cccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAE-LPGGKLLAVKKLSNTV-SQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVY 517 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~-~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 517 (720)
..|..++.||+|+.|.|-.|+ ..+|+.+|||++.+.. ..........+|+.+|+-+.||||+++|+++++..++|+|.
T Consensus 12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvl 91 (786)
T KOG0588|consen 12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVL 91 (786)
T ss_pred cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEE
Confidence 457788999999999999995 4789999999997652 22333456779999999999999999999999999999999
Q ss_pred eeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCC
Q 004994 518 DYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFS 597 (720)
Q Consensus 518 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~ 597 (720)
||+++|.|++++.. +..+...+..+++.||..|+.|+|.. +|+||||||+|+|||..+++||+|||+|..-.+
T Consensus 92 Eyv~gGELFdylv~----kG~l~e~eaa~ff~QIi~gv~yCH~~---~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~ 164 (786)
T KOG0588|consen 92 EYVPGGELFDYLVR----KGPLPEREAAHFFRQILDGVSYCHAF---NICHRDLKPENLLLDVKNNIKIADFGMASLEVP 164 (786)
T ss_pred EecCCchhHHHHHh----hCCCCCHHHHHHHHHHHHHHHHHhhh---cceeccCCchhhhhhcccCEeeeccceeecccC
Confidence 99999999999953 56788899999999999999999998 899999999999999999999999999977544
Q ss_pred CCCcccccCccccccCCCCccCCC-CC-CCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhc
Q 004994 598 GSTNELSEGLLTAHGSGAPEFESG-SY-SCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMV 675 (720)
Q Consensus 598 ~~~~~~~~~~~~~~~~~aPE~~~~-~~-~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (720)
+. .-+..+|.+.|.+||++.| .| +.++||||+|||||.|+||+.||++.+.+.-...++....
T Consensus 165 gk---lLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~f------------ 229 (786)
T KOG0588|consen 165 GK---LLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGVF------------ 229 (786)
T ss_pred Cc---cccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCcc------------
Confidence 33 4455678999999999965 56 5689999999999999999999985432211111111100
Q ss_pred CCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q 004994 676 DPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDL 716 (720)
Q Consensus 676 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L 716 (720)
..+...+.+..+|+.+|+..||+.|.|++||++|-
T Consensus 230 ------~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP 264 (786)
T KOG0588|consen 230 ------EMPSNISSEAQDLLRRMLDVDPSTRITTEEILKHP 264 (786)
T ss_pred ------cCCCcCCHHHHHHHHHHhccCccccccHHHHhhCc
Confidence 01233456788999999999999999999999873
No 35
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=9.7e-40 Score=314.58 Aligned_cols=237 Identities=23% Similarity=0.321 Sum_probs=199.8
Q ss_pred cCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEeccc-ccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNT-VSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVY 517 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~-~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 517 (720)
++|+..+.||.|+||+|..++. .+|..+|+|++.+. +......+....|..+|+.+.||.++++++.|.+.+..||||
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvm 123 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVM 123 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEE
Confidence 4677789999999999999965 46899999999754 233344566788999999999999999999999999999999
Q ss_pred eeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCC
Q 004994 518 DYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFS 597 (720)
Q Consensus 518 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~ 597 (720)
||.++|.|..+++. .+.|+.+...-+|.+|+.||+|||+. +|++|||||+|||+|.+|.+||+|||+|+.+..
T Consensus 124 eyv~GGElFS~Lrk----~~rF~e~~arFYAAeivlAleylH~~---~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~ 196 (355)
T KOG0616|consen 124 EYVPGGELFSYLRK----SGRFSEPHARFYAAEIVLALEYLHSL---DIIYRDLKPENLLLDQNGHIKITDFGFAKRVSG 196 (355)
T ss_pred eccCCccHHHHHHh----cCCCCchhHHHHHHHHHHHHHHHHhc---CeeeccCChHHeeeccCCcEEEEeccceEEecC
Confidence 99999999999964 35788899999999999999999998 899999999999999999999999999998743
Q ss_pred CCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcC
Q 004994 598 GSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVD 676 (720)
Q Consensus 598 ~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (720)
. +...+||+.|+|||.+ +..|+.++|+|||||++|||+.|.+||....+.. ...+++.
T Consensus 197 r-----T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~----------------iY~KI~~ 255 (355)
T KOG0616|consen 197 R-----TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQ----------------IYEKILE 255 (355)
T ss_pred c-----EEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHH----------------HHHHHHh
Confidence 2 3457899999999998 6679999999999999999999999997655422 2223333
Q ss_pred CCCCchhhHHHHHHHHHHHHHHhccCCCCC
Q 004994 677 PSLDGAYLAKSLSRFADIISRCVQWEPGFR 706 (720)
Q Consensus 677 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~R 706 (720)
..+. ++.....++.+|+.+.|++|-.+|
T Consensus 256 ~~v~--fP~~fs~~~kdLl~~LL~vD~t~R 283 (355)
T KOG0616|consen 256 GKVK--FPSYFSSDAKDLLKKLLQVDLTKR 283 (355)
T ss_pred Cccc--CCcccCHHHHHHHHHHHhhhhHhh
Confidence 2222 333445678899999999999999
No 36
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-40 Score=342.37 Aligned_cols=238 Identities=26% Similarity=0.420 Sum_probs=197.4
Q ss_pred CCCeeccCCCceEEEEEeCCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEeeCCCC
Q 004994 444 EGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDYGGNC 523 (720)
Q Consensus 444 ~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~g 523 (720)
+.+-||.|+.|.||+|+++ ++.||||+++.-. ..+|+-|++|+|+||+.+.|+|....-++||||||..|
T Consensus 128 ELeWlGSGaQGAVF~Grl~-netVAVKKV~elk---------ETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~G 197 (904)
T KOG4721|consen 128 ELEWLGSGAQGAVFLGRLH-NETVAVKKVRELK---------ETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQG 197 (904)
T ss_pred hhhhhccCcccceeeeecc-CceehhHHHhhhh---------hhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccc
Confidence 4578999999999999985 4689999986321 24688899999999999999999999999999999999
Q ss_pred CHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCCCccc
Q 004994 524 TLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNEL 603 (720)
Q Consensus 524 sL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~~~ 603 (720)
-|.++|+. ...+......++..+||.|+.|||.. .|||||||+-||||+.+-.|||+|||-++.....++
T Consensus 198 qL~~VLka----~~~itp~llv~Wsk~IA~GM~YLH~h---KIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~ST--- 267 (904)
T KOG4721|consen 198 QLYEVLKA----GRPITPSLLVDWSKGIAGGMNYLHLH---KIIHRDLKSPNILISYDDVVKISDFGTSKELSDKST--- 267 (904)
T ss_pred cHHHHHhc----cCccCHHHHHHHHHHhhhhhHHHHHh---hHhhhccCCCceEeeccceEEeccccchHhhhhhhh---
Confidence 99999964 35677778889999999999999987 899999999999999999999999999987754322
Q ss_pred ccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcCCCCCch
Q 004994 604 SEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDGA 682 (720)
Q Consensus 604 ~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 682 (720)
.-.+.||..|||||++ ..++++|+||||||||||||+||..||.+.+. ..+.|... ...+.-.
T Consensus 268 kMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVds----sAIIwGVG------------sNsL~Lp 331 (904)
T KOG4721|consen 268 KMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDS----SAIIWGVG------------SNSLHLP 331 (904)
T ss_pred hhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccch----heeEEecc------------CCccccc
Confidence 2347789999999999 55799999999999999999999999975432 22223221 1111112
Q ss_pred hhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 004994 683 YLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLL 717 (720)
Q Consensus 683 ~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 717 (720)
.+..++..|.-|++.||+..|..||++.+++.||+
T Consensus 332 vPstcP~GfklL~Kqcw~sKpRNRPSFrqil~Hld 366 (904)
T KOG4721|consen 332 VPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLD 366 (904)
T ss_pred CcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHh
Confidence 34456778889999999999999999999999986
No 37
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=9.3e-40 Score=332.70 Aligned_cols=257 Identities=24% Similarity=0.308 Sum_probs=203.1
Q ss_pred HHhcCCCCCCeeccCCCceEEEEE-eCCCcEEEEEEeccccccc------------ccHHHHHHHHHHHHccCCCceeEE
Q 004994 437 QYTNSFSEGNFIGEGLLGSVYKAE-LPGGKLLAVKKLSNTVSQR------------QTDEEFLELASTISRLRHGNIVEL 503 (720)
Q Consensus 437 ~~~~~~~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~------------~~~~~~~~e~~~l~~l~H~niv~l 503 (720)
+..++|+..+.||+|.||+|-+|. ..+++.||||++.+....+ ...+...+|+.+|++++|||||+|
T Consensus 94 k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~L 173 (576)
T KOG0585|consen 94 KQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKL 173 (576)
T ss_pred eehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEE
Confidence 345789999999999999999995 4579999999997542211 123578999999999999999999
Q ss_pred EeEeccC--CeEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCC
Q 004994 504 IGYCNEH--GQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEK 581 (720)
Q Consensus 504 ~~~~~~~--~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~ 581 (720)
+++..+. +.+|||+|||..|.+...-. ....++..+..+++.++..||.|||.+ +||||||||+|+|++++
T Consensus 174 iEvLDDP~s~~~YlVley~s~G~v~w~p~----d~~els~~~Ar~ylrDvv~GLEYLH~Q---giiHRDIKPsNLLl~~~ 246 (576)
T KOG0585|consen 174 IEVLDDPESDKLYLVLEYCSKGEVKWCPP----DKPELSEQQARKYLRDVVLGLEYLHYQ---GIIHRDIKPSNLLLSSD 246 (576)
T ss_pred EEeecCcccCceEEEEEeccCCccccCCC----CcccccHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEEcCC
Confidence 9999764 58999999999988764321 223388999999999999999999997 99999999999999999
Q ss_pred CCeEEccccCCCCCCCCCC---cccccCccccccCCCCccCCC-C----CCCccchHhHHHHHHHHHhCCCCCCCCCCcc
Q 004994 582 LIVRVSDCGLAPLLFSGST---NELSEGLLTAHGSGAPEFESG-S----YSCQSDVYSLGVVMLELLTGRKPYDRSRPRG 653 (720)
Q Consensus 582 ~~~kl~DFGla~~~~~~~~---~~~~~~~~~~~~~~aPE~~~~-~----~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~ 653 (720)
|+|||+|||.+.....+.. ........||+.|+|||...+ . .+.+.||||+||+||.|+.|+.||-.....
T Consensus 247 g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~- 325 (576)
T KOG0585|consen 247 GTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFEL- 325 (576)
T ss_pred CcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHH-
Confidence 9999999999987643321 112234779999999999844 2 356899999999999999999999654321
Q ss_pred ccchhhhcccccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q 004994 654 EQSLVRWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDL 716 (720)
Q Consensus 654 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L 716 (720)
+...+++...+......+..+++.+|++++|.+||++|.+..+|..|.
T Consensus 326 ---------------~l~~KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hp 373 (576)
T KOG0585|consen 326 ---------------ELFDKIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHP 373 (576)
T ss_pred ---------------HHHHHHhcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhheecc
Confidence 223334443333322334557889999999999999999999987664
No 38
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=1.6e-39 Score=337.23 Aligned_cols=253 Identities=22% Similarity=0.299 Sum_probs=201.3
Q ss_pred hcCCCCCCeeccCCCceEEEEE-eCCCcEEEEEEecccc-cccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEE
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAE-LPGGKLLAVKKLSNTV-SQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLV 516 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~-~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 516 (720)
.++|.....||+|+||.||.|+ ..+|..+|+|++++.. ......+..+.|-.+|...++|+||++|..|.+.+.+|||
T Consensus 140 ~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYLi 219 (550)
T KOG0605|consen 140 LDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYLI 219 (550)
T ss_pred cccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEEE
Confidence 4678889999999999999995 4679999999998653 3345556788899999999999999999999999999999
Q ss_pred EeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCC
Q 004994 517 YDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLF 596 (720)
Q Consensus 517 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~ 596 (720)
|||++||++..+|.. ...++......++.+.+-|+..||+. |+|||||||+|+|||..|++||+|||++.-+.
T Consensus 220 MEylPGGD~mTLL~~----~~~L~e~~arfYiaE~vlAI~~iH~~---gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~ 292 (550)
T KOG0605|consen 220 MEYLPGGDMMTLLMR----KDTLTEDWARFYIAETVLAIESIHQL---GYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLD 292 (550)
T ss_pred EEecCCccHHHHHHh----cCcCchHHHHHHHHHHHHHHHHHHHc---CcccccCChhheeecCCCCEeeccccccchhh
Confidence 999999999999953 45677777788888888999999988 99999999999999999999999999985431
Q ss_pred CC----------------------C-C-----c-----------------ccccCccccccCCCCccC-CCCCCCccchH
Q 004994 597 SG----------------------S-T-----N-----------------ELSEGLLTAHGSGAPEFE-SGSYSCQSDVY 630 (720)
Q Consensus 597 ~~----------------------~-~-----~-----------------~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~ 630 (720)
.. + . . .......||+-|+|||++ ...|+..+|+|
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwW 372 (550)
T KOG0605|consen 293 KKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWW 372 (550)
T ss_pred hhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHH
Confidence 10 0 0 0 001235789999999998 55699999999
Q ss_pred hHHHHHHHHHhCCCCCCCCCCccc-cchhhhcccccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCC-
Q 004994 631 SLGVVMLELLTGRKPYDRSRPRGE-QSLVRWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPP- 708 (720)
Q Consensus 631 S~Gvvl~elltG~~Pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt- 708 (720)
|+|||||||+.|.+||...++... ..++.|... +... .......+..|||.+|+. ||++|--
T Consensus 373 SLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~-l~fP--------------~~~~~s~eA~DLI~rll~-d~~~RLG~ 436 (550)
T KOG0605|consen 373 SLGCIMYEMLVGYPPFCSETPQETYRKIVNWRET-LKFP--------------EEVDLSDEAKDLITRLLC-DPENRLGS 436 (550)
T ss_pred HHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhh-ccCC--------------CcCcccHHHHHHHHHHhc-CHHHhcCc
Confidence 999999999999999988776553 344444321 1100 001122577899999999 9999964
Q ss_pred --HHHHHH
Q 004994 709 --MSEIVQ 714 (720)
Q Consensus 709 --~~evl~ 714 (720)
++||-+
T Consensus 437 ~G~~EIK~ 444 (550)
T KOG0605|consen 437 KGAEEIKK 444 (550)
T ss_pred ccHHHHhc
Confidence 666644
No 39
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.8e-40 Score=330.38 Aligned_cols=261 Identities=23% Similarity=0.342 Sum_probs=196.7
Q ss_pred CCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccC---C--eEE
Q 004994 441 SFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEH---G--QHL 514 (720)
Q Consensus 441 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~---~--~~~ 514 (720)
.|...+++|.|+||.||+|.. .+++.||||++..+. +.-.+|+++|++++|||||++.-+|... + ...
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~------r~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~ln 98 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDK------RYKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLN 98 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCC------CcCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHH
Confidence 456679999999999999965 567999999986432 2335789999999999999999888532 2 334
Q ss_pred EEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCC-CCeEEccccCCC
Q 004994 515 LVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEK-LIVRVSDCGLAP 593 (720)
Q Consensus 515 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~-~~~kl~DFGla~ 593 (720)
+|||||+. +|.++++.....+..++...+.-+..|+.+||+|||.. +|+||||||.|+|+|.+ |.+||||||.|+
T Consensus 99 lVleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~---~IcHRDIKPqNlLvD~~tg~LKicDFGSAK 174 (364)
T KOG0658|consen 99 LVLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSH---GICHRDIKPQNLLVDPDTGVLKICDFGSAK 174 (364)
T ss_pred HHHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhc---CcccCCCChheEEEcCCCCeEEeccCCcce
Confidence 89999997 89998875444456677777778999999999999996 99999999999999976 899999999999
Q ss_pred CCCCCCCcccccCccccccCCCCccCC--CCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhh
Q 004994 594 LLFSGSTNELSEGLLTAHGSGAPEFES--GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDAL 671 (720)
Q Consensus 594 ~~~~~~~~~~~~~~~~~~~~~aPE~~~--~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (720)
.+..++.+ ....-+++|+|||.+. ..|+.+.||||.|||+.||+-|++-|.+....+....+-.+. ..+..+.+
T Consensus 175 ~L~~~epn---iSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~l-G~Pt~e~I 250 (364)
T KOG0658|consen 175 VLVKGEPN---ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVL-GTPTREDI 250 (364)
T ss_pred eeccCCCc---eeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHh-CCCCHHHH
Confidence 98765543 2345678999999984 479999999999999999999999998754332211111111 11111122
Q ss_pred hhhcC-------CCCCch-----hhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 672 SRMVD-------PSLDGA-----YLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 672 ~~~~~-------~~~~~~-----~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
..|-. |.+... ......++..+|+.++|+.+|.+|.++.|++.+
T Consensus 251 ~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h 306 (364)
T KOG0658|consen 251 KSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAH 306 (364)
T ss_pred hhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcc
Confidence 21111 111111 223345778899999999999999999999864
No 40
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-40 Score=337.20 Aligned_cols=248 Identities=26% Similarity=0.406 Sum_probs=205.1
Q ss_pred CCCCCCeeccCCCceEEEE-EeCCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEee
Q 004994 441 SFSEGNFIGEGLLGSVYKA-ELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDY 519 (720)
Q Consensus 441 ~~~~~~~lg~G~~g~Vy~~-~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 519 (720)
.|+..++||+|+||.|||| +..+++.||+|++..+.. ....++..+|+.++..++|+||.++||.+..+..++++|||
T Consensus 14 ~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~-~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey 92 (467)
T KOG0201|consen 14 LYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEA-EDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEY 92 (467)
T ss_pred ccccchhccccccceeeeeeeccccceEEEEEechhhc-chhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHH
Confidence 4666789999999999999 556899999999975432 45567889999999999999999999999999999999999
Q ss_pred CCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCC
Q 004994 520 GGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGS 599 (720)
Q Consensus 520 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~ 599 (720)
|.+|++.+.+... ..+.+....-|+.++..||.|||.. +.+|||||+.|||+..+|.||++|||++-.+....
T Consensus 93 ~~gGsv~~lL~~~----~~~~E~~i~~ilre~l~~l~ylH~~---~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~ 165 (467)
T KOG0201|consen 93 CGGGSVLDLLKSG----NILDEFEIAVILREVLKGLDYLHSE---KKIHRDIKAANILLSESGDVKLADFGVAGQLTNTV 165 (467)
T ss_pred hcCcchhhhhccC----CCCccceeeeehHHHHHHhhhhhhc---ceecccccccceeEeccCcEEEEecceeeeeechh
Confidence 9999999999643 2335556667888999999999997 89999999999999999999999999998775433
Q ss_pred CcccccCccccccCCCCccCCC-CCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcCCC
Q 004994 600 TNELSEGLLTAHGSGAPEFESG-SYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPS 678 (720)
Q Consensus 600 ~~~~~~~~~~~~~~~aPE~~~~-~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (720)
. ....+.||++|||||++.+ .|+.|+||||+|++++||.+|.+|+....+.....++ .+-..|.
T Consensus 166 ~--rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflI-------------pk~~PP~ 230 (467)
T KOG0201|consen 166 K--RRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLI-------------PKSAPPR 230 (467)
T ss_pred h--ccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEec-------------cCCCCCc
Confidence 2 3366889999999999954 7999999999999999999999999876652211111 1112333
Q ss_pred CCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 679 LDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 679 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
+.+ .....|.+|+..||.+||+.||++.+++++
T Consensus 231 L~~----~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh 263 (467)
T KOG0201|consen 231 LDG----DFSPPFKEFVEACLDKNPEFRPSAKELLKH 263 (467)
T ss_pred ccc----ccCHHHHHHHHHHhhcCcccCcCHHHHhhh
Confidence 333 344678999999999999999999999976
No 41
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=3.6e-39 Score=336.65 Aligned_cols=268 Identities=20% Similarity=0.290 Sum_probs=202.2
Q ss_pred cCCCCCCeeccCCCceEEEEEeC-CCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEe
Q 004994 440 NSFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYD 518 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 518 (720)
++|...+.||+|+||+||+|+.. +++.||+|++..........+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE 80 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence 36888899999999999999764 68899999997654444455678899999999999999999999999999999999
Q ss_pred eCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCC
Q 004994 519 YGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSG 598 (720)
Q Consensus 519 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~ 598 (720)
|++++.+..+.. ....+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 81 ~~~~~~l~~~~~----~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 153 (287)
T cd07848 81 YVEKNMLELLEE----MPNGVPPEKVRSYIYQLIKAIHWCHKN---DIVHRDIKPENLLISHNDVLKLCDFGFARNLSEG 153 (287)
T ss_pred cCCCCHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccCccccccc
Confidence 999987765442 234588888999999999999999987 9999999999999999999999999999876432
Q ss_pred CCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCch--------h
Q 004994 599 STNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDI--------D 669 (720)
Q Consensus 599 ~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~--------~ 669 (720)
... ......++..|+|||.. ...++.++|||||||++|||++|+.||...........+......+... .
T Consensus 154 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (287)
T cd07848 154 SNA-NYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNP 232 (287)
T ss_pred ccc-cccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccc
Confidence 211 12234578899999988 5578999999999999999999999997643322111111110000000 0
Q ss_pred hhhhhcCCCC------CchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 670 ALSRMVDPSL------DGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 670 ~~~~~~~~~~------~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.......+.. ...+....+.++.+++.+||+.||++|||++|+++|
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~h 284 (287)
T cd07848 233 RFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNH 284 (287)
T ss_pred hhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 0000000000 011112245678999999999999999999999875
No 42
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=9.1e-39 Score=340.48 Aligned_cols=267 Identities=21% Similarity=0.348 Sum_probs=202.4
Q ss_pred hcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEE
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVY 517 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 517 (720)
.++|+..+.||+|+||.||++.. .+|..||+|.+..... ....+.+.+|++++++++||||+++++++...+..++||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 82 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIK-PAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM 82 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccC-HHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEe
Confidence 36788899999999999999965 4688999999875432 334567999999999999999999999999999999999
Q ss_pred eeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCC
Q 004994 518 DYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFS 597 (720)
Q Consensus 518 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~ 597 (720)
||+++++|.+++.. ...+++.....++.+++.||.|||+.+ +|+||||||+|||++.++.+||+|||+++....
T Consensus 83 e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~--~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 156 (331)
T cd06649 83 EHMDGGSLDQVLKE----AKRIPEEILGKVSIAVLRGLAYLREKH--QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 156 (331)
T ss_pred ecCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHhhcC--CEEcCCCChhhEEEcCCCcEEEccCcccccccc
Confidence 99999999999853 345788889999999999999999852 699999999999999999999999999976533
Q ss_pred CCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcc------------cc
Q 004994 598 GSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAI------------PR 664 (720)
Q Consensus 598 ~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~------------~~ 664 (720)
. ......++..|+|||.. ...++.++|||||||++|||+||+.||................ +.
T Consensus 157 ~----~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (331)
T cd06649 157 S----MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPR 232 (331)
T ss_pred c----ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccCcc
Confidence 2 12234678899999998 4568999999999999999999999996533211110000000 00
Q ss_pred c------------------CchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q 004994 665 L------------------HDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDL 716 (720)
Q Consensus 665 ~------------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L 716 (720)
. ...+....+...............++.+|+.+||+.||++|||++|++++-
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~ 302 (331)
T cd06649 233 PRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHT 302 (331)
T ss_pred cccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcCh
Confidence 0 000000000000000000112346789999999999999999999999763
No 43
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=6.5e-39 Score=334.32 Aligned_cols=252 Identities=24% Similarity=0.306 Sum_probs=198.8
Q ss_pred CCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccc-cccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEee
Q 004994 442 FSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQ-RQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDY 519 (720)
Q Consensus 442 ~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 519 (720)
|...+.||+|+||+||+|.. .+|+.||+|.+.+.... ......+.+|++++++++|+||+++++++.+.+..++||||
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEe
Confidence 56678999999999999954 67999999998754322 23345678999999999999999999999999999999999
Q ss_pred CCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCC
Q 004994 520 GGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGS 599 (720)
Q Consensus 520 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~ 599 (720)
+++|+|.+++... ....+++.....++.|++.||+|||+. +|+||||||+|||+++++.+||+|||++.......
T Consensus 82 ~~~g~L~~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~ 156 (285)
T cd05631 82 MNGGDLKFHIYNM--GNPGFDEQRAIFYAAELCCGLEDLQRE---RIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGE 156 (285)
T ss_pred cCCCcHHHHHHhh--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCC
Confidence 9999998877532 234688999999999999999999987 99999999999999999999999999997653322
Q ss_pred CcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcCCC
Q 004994 600 TNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPS 678 (720)
Q Consensus 600 ~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (720)
......++..|+|||+. ...++.++|||||||++|||++|+.||...........+. ..+...
T Consensus 157 ---~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~------------~~~~~~- 220 (285)
T cd05631 157 ---TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVD------------RRVKED- 220 (285)
T ss_pred ---eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHH------------HHhhcc-
Confidence 12234678999999998 5579999999999999999999999997543221110000 000000
Q ss_pred CCchhhHHHHHHHHHHHHHHhccCCCCCCC-----HHHHHHH
Q 004994 679 LDGAYLAKSLSRFADIISRCVQWEPGFRPP-----MSEIVQD 715 (720)
Q Consensus 679 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt-----~~evl~~ 715 (720)
...+....+.++.+|+.+||+.||++||+ ++|++++
T Consensus 221 -~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h 261 (285)
T cd05631 221 -QEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQH 261 (285)
T ss_pred -cccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcC
Confidence 01122233467889999999999999997 8888875
No 44
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=1.5e-38 Score=331.19 Aligned_cols=259 Identities=25% Similarity=0.427 Sum_probs=204.7
Q ss_pred cCCCCCCeeccCCCceEEEEEeCC------CcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAELPG------GKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQH 513 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~~~------g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~ 513 (720)
++|+..+.||+|+||.||+|.... ...||+|.+.... ......+|.+|++++++++||||+++++++...+..
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~-~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~ 83 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENA-EPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPT 83 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCC-CHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCce
Confidence 357778999999999999996532 2579999987443 233456789999999999999999999999998999
Q ss_pred EEEEeeCCCCCHHHHhhccch------------hccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCC
Q 004994 514 LLVYDYGGNCTLHDLLHSDEE------------AHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEK 581 (720)
Q Consensus 514 ~lv~e~~~~gsL~~~l~~~~~------------~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~ 581 (720)
+++|||+++++|.+++..... ....+++.....++.+++.||+|||+. +++||||||+||+++++
T Consensus 84 ~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nil~~~~ 160 (283)
T cd05048 84 CMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSH---HFVHRDLAARNCLVGEG 160 (283)
T ss_pred EEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccccceEEEcCC
Confidence 999999999999999864311 114578889999999999999999987 89999999999999999
Q ss_pred CCeEEccccCCCCCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhh
Q 004994 582 LIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVR 659 (720)
Q Consensus 582 ~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~ 659 (720)
+.+||+|||+++...............++..|+|||.. .+.++.++|||||||++|||++ |..||....... ...
T Consensus 161 ~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~---~~~ 237 (283)
T cd05048 161 LTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQE---VIE 237 (283)
T ss_pred CcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHH---HHH
Confidence 99999999999866443322223334456789999987 5679999999999999999998 999996543221 111
Q ss_pred hcccccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 660 WAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 660 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
. +........+..++.++.+++.+||+.||.+||++.||+++|+++
T Consensus 238 ~--------------i~~~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~~ 283 (283)
T cd05048 238 M--------------IRSRQLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRSW 283 (283)
T ss_pred H--------------HHcCCcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhcC
Confidence 1 000000111234457889999999999999999999999999863
No 45
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=3.3e-38 Score=339.27 Aligned_cols=247 Identities=24% Similarity=0.331 Sum_probs=190.6
Q ss_pred CCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEee
Q 004994 441 SFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDY 519 (720)
Q Consensus 441 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 519 (720)
+|+..+.||+|+||+||+|.. .+|+.||||++.... .....+.+.+|+++++.++|+||+++++++.+.+..++||||
T Consensus 75 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 153 (353)
T PLN00034 75 ELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNH-EDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEF 153 (353)
T ss_pred HHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCC-cHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEec
Confidence 455668899999999999965 478999999986432 233456789999999999999999999999999999999999
Q ss_pred CCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCC
Q 004994 520 GGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGS 599 (720)
Q Consensus 520 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~ 599 (720)
+.+|+|.+.. ...+.....++.++++||.|||+. +|+||||||+|||+++++.+||+|||+++.+....
T Consensus 154 ~~~~~L~~~~--------~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~ 222 (353)
T PLN00034 154 MDGGSLEGTH--------IADEQFLADVARQILSGIAYLHRR---HIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTM 222 (353)
T ss_pred CCCCcccccc--------cCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEcccccceeccccc
Confidence 9999986532 234566778999999999999987 99999999999999999999999999998763221
Q ss_pred CcccccCccccccCCCCccCC-----CC-CCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhh
Q 004994 600 TNELSEGLLTAHGSGAPEFES-----GS-YSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSR 673 (720)
Q Consensus 600 ~~~~~~~~~~~~~~~aPE~~~-----~~-~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (720)
. ......++..|+|||.+. +. .+.++|||||||++|||++|+.||...............
T Consensus 223 ~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~------------ 288 (353)
T PLN00034 223 D--PCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAI------------ 288 (353)
T ss_pred c--cccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHH------------
Confidence 1 122346788999999863 22 356899999999999999999999733221111111000
Q ss_pred hcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 674 MVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 674 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
. .............++.+++.+||+.||++|||++|++++
T Consensus 289 -~-~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h 328 (353)
T PLN00034 289 -C-MSQPPEAPATASREFRHFISCCLQREPAKRWSAMQLLQH 328 (353)
T ss_pred -h-ccCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0 000000112234578899999999999999999999976
No 46
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=1.7e-38 Score=344.75 Aligned_cols=262 Identities=23% Similarity=0.350 Sum_probs=203.0
Q ss_pred hcCCCCCCeeccCCCceEEEEEeC------CCcEEEEEEecccccccccHHHHHHHHHHHHccC-CCceeEEEeEeccCC
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAELP------GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLR-HGNIVELIGYCNEHG 511 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~~~~~~~~ 511 (720)
.+.|...++||+|+||.||+|... .+..||||++.... .....+.|.+|+++++++. |||||+++++|.+.+
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~ 114 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTA-RSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSG 114 (400)
T ss_pred ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCC-ChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCC
Confidence 457788899999999999999642 23479999997543 2334567999999999996 999999999999999
Q ss_pred eEEEEEeeCCCCCHHHHhhccch---------------------------------------------------------
Q 004994 512 QHLLVYDYGGNCTLHDLLHSDEE--------------------------------------------------------- 534 (720)
Q Consensus 512 ~~~lv~e~~~~gsL~~~l~~~~~--------------------------------------------------------- 534 (720)
..++||||+++|+|.++++....
T Consensus 115 ~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (400)
T cd05105 115 PIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEI 194 (400)
T ss_pred ceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhh
Confidence 99999999999999998864211
Q ss_pred -----------------------------------hccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEc
Q 004994 535 -----------------------------------AHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLD 579 (720)
Q Consensus 535 -----------------------------------~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~ 579 (720)
....+++..+.+++.|+++||.|||+. +|+||||||+|||++
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dikp~Nill~ 271 (400)
T cd05105 195 KEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASK---NCVHRDLAARNVLLA 271 (400)
T ss_pred hhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHhEEEe
Confidence 012478888999999999999999987 899999999999999
Q ss_pred CCCCeEEccccCCCCCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccch
Q 004994 580 EKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSL 657 (720)
Q Consensus 580 ~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~ 657 (720)
+++.+||+|||+++.+.............++..|+|||.+ ...++.++|||||||++|||++ |..||........ +
T Consensus 272 ~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~--~ 349 (400)
T cd05105 272 QGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDST--F 349 (400)
T ss_pred CCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHH--H
Confidence 9999999999999866432222122233456789999987 5678999999999999999997 9999865321110 0
Q ss_pred hhhcccccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhC
Q 004994 658 VRWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCMI 720 (720)
Q Consensus 658 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~ 720 (720)
... +.. ......+...+.++.+++.+||+.||++|||+.+|.+.|++++
T Consensus 350 ~~~----------~~~----~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~ 398 (400)
T cd05105 350 YNK----------IKS----GYRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLL 398 (400)
T ss_pred HHH----------Hhc----CCCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHc
Confidence 000 000 0000111233467889999999999999999999999999864
No 47
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=1.8e-38 Score=327.49 Aligned_cols=256 Identities=23% Similarity=0.319 Sum_probs=201.7
Q ss_pred cCCCCCCeeccCCCceEEEEEeC----CCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAELP----GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLL 515 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~~----~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~l 515 (720)
++|...+.||+|+||.||+|.+. .+..||+|.++.... ....+.|.+|+.++++++||||+++++++...+..++
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 83 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCS-DKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMI 83 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCC-HHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEE
Confidence 46778899999999999999653 367899999975432 2334678999999999999999999999999999999
Q ss_pred EEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCC
Q 004994 516 VYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLL 595 (720)
Q Consensus 516 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~ 595 (720)
||||+++|+|.+++... ...+++.....++.+++.||+|||+. +++||||||+|||++.++.+|++|||.+...
T Consensus 84 v~e~~~~~~L~~~l~~~---~~~l~~~~~~~~~~~i~~al~~lH~~---~iiH~dikp~nili~~~~~~~l~dfg~~~~~ 157 (266)
T cd05064 84 VTEYMSNGALDSFLRKH---EGQLVAGQLMGMLPGLASGMKYLSEM---GYVHKGLAAHKVLVNSDLVCKISGFRRLQED 157 (266)
T ss_pred EEEeCCCCcHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeeccccHhhEEEcCCCcEEECCCcccccc
Confidence 99999999999998642 24688999999999999999999987 8999999999999999999999999987654
Q ss_pred CCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcccccCchhhhhh
Q 004994 596 FSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSR 673 (720)
Q Consensus 596 ~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (720)
.... ........++..|+|||.. .+.++.++|||||||++||+++ |+.||....... ....
T Consensus 158 ~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~---~~~~------------- 220 (266)
T cd05064 158 KSEA-IYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQD---VIKA------------- 220 (266)
T ss_pred cccc-hhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH---HHHH-------------
Confidence 2211 1111122345679999987 5678999999999999999775 999996543211 1111
Q ss_pred hcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhC
Q 004994 674 MVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCMI 720 (720)
Q Consensus 674 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~ 720 (720)
+.+. .....+..++..+.+++.+||+.+|++||+++|+++.|++++
T Consensus 221 ~~~~-~~~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~~ 266 (266)
T cd05064 221 VEDG-FRLPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKMV 266 (266)
T ss_pred HHCC-CCCCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhhC
Confidence 0000 000012234467889999999999999999999999998875
No 48
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.8e-39 Score=304.12 Aligned_cols=251 Identities=24% Similarity=0.321 Sum_probs=205.9
Q ss_pred hcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccc-cccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEE
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTV-SQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLV 516 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~-~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 516 (720)
-++|+.++.||+|.||.||.|+. +++..||+|++.+.. ......+++.+|+++-..|+||||+++|+||.+....|++
T Consensus 21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLi 100 (281)
T KOG0580|consen 21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLI 100 (281)
T ss_pred hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEE
Confidence 35788999999999999999954 568899999987543 2344567899999999999999999999999999999999
Q ss_pred EeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCC
Q 004994 517 YDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLF 596 (720)
Q Consensus 517 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~ 596 (720)
+||...|++...|.+. ....++......++.|+|.||.|+|.. +||||||||+|+|++.++..||+|||.+-.-.
T Consensus 101 lEya~~gel~k~L~~~--~~~~f~e~~~a~Yi~q~A~Al~y~h~k---~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p 175 (281)
T KOG0580|consen 101 LEYAPRGELYKDLQEG--RMKRFDEQRAATYIKQLANALLYCHLK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP 175 (281)
T ss_pred EEecCCchHHHHHHhc--ccccccccchhHHHHHHHHHHHHhccC---CcccCCCCHHHhccCCCCCeeccCCCceeecC
Confidence 9999999999999742 345677888888999999999999987 89999999999999999999999999986543
Q ss_pred CCCCcccccCccccccCCCCccCC-CCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhc
Q 004994 597 SGSTNELSEGLLTAHGSGAPEFES-GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMV 675 (720)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~aPE~~~-~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (720)
. .......||.-|.+||+.. ...+.++|+|++||+.||++.|.+||......+.. .++.
T Consensus 176 ~----~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etY----------------krI~ 235 (281)
T KOG0580|consen 176 S----NKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETY----------------KRIR 235 (281)
T ss_pred C----CCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHH----------------HHHH
Confidence 1 2234478899999999994 46899999999999999999999999764322211 1111
Q ss_pred CCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q 004994 676 DPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDL 716 (720)
Q Consensus 676 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L 716 (720)
.-.+ .++.....+..|++.+|+.++|.+|.+..|++++-
T Consensus 236 k~~~--~~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hp 274 (281)
T KOG0580|consen 236 KVDL--KFPSTISGGAADLISRLLVKNPIERLALTEVMDHP 274 (281)
T ss_pred Hccc--cCCcccChhHHHHHHHHhccCccccccHHHHhhhH
Confidence 1111 11233446788999999999999999999999863
No 49
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=1.4e-38 Score=339.42 Aligned_cols=261 Identities=24% Similarity=0.380 Sum_probs=200.9
Q ss_pred cCCCCCCeeccCCCceEEEEEe------CCCcEEEEEEecccccccccHHHHHHHHHHHHcc-CCCceeEEEeEecc-CC
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL------PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRL-RHGNIVELIGYCNE-HG 511 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~------~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~-~~ 511 (720)
++|...+.||+|+||.||+|.. .+++.||+|+++.... ....+.+..|++++.++ +|+||++++++|.. ..
T Consensus 7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~-~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~ 85 (337)
T cd05054 7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGAT-ASEYKALMTELKILIHIGHHLNVVNLLGACTKPGG 85 (337)
T ss_pred HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCC-HHHHHHHHHHHHHHHhhccCcchhheeeeEecCCC
Confidence 4688889999999999999953 2357899999875432 23345678899999999 89999999998864 45
Q ss_pred eEEEEEeeCCCCCHHHHhhccch---------------------------------------------------------
Q 004994 512 QHLLVYDYGGNCTLHDLLHSDEE--------------------------------------------------------- 534 (720)
Q Consensus 512 ~~~lv~e~~~~gsL~~~l~~~~~--------------------------------------------------------- 534 (720)
..+++|||+++++|.+++.....
T Consensus 86 ~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (337)
T cd05054 86 PLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDEL 165 (337)
T ss_pred CEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHH
Confidence 78899999999999998853211
Q ss_pred hccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCCCcccccCccccccCC
Q 004994 535 AHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSG 614 (720)
Q Consensus 535 ~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~ 614 (720)
....++|..+..++.++++||+|||+. +|+||||||+|||+++++.+||+|||+++.+.............++..|+
T Consensus 166 ~~~~l~~~~~~~~~~qi~~aL~~lH~~---~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~ 242 (337)
T cd05054 166 YKEPLTLEDLISYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWM 242 (337)
T ss_pred hhcCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCcccc
Confidence 123689999999999999999999987 99999999999999999999999999998764332222222334567899
Q ss_pred CCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcccccCchhhhhhhcCCCCCchhhHHHHHHHH
Q 004994 615 APEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFA 692 (720)
Q Consensus 615 aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 692 (720)
|||++ ...++.++|||||||++|||++ |+.||......+. ... .+........+.....++.
T Consensus 243 aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~--~~~--------------~~~~~~~~~~~~~~~~~~~ 306 (337)
T cd05054 243 APESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEE--FCR--------------RLKEGTRMRAPEYATPEIY 306 (337)
T ss_pred CcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHH--HHH--------------HHhccCCCCCCccCCHHHH
Confidence 99987 6679999999999999999998 9999965322111 000 0000000001112345788
Q ss_pred HHHHHHhccCCCCCCCHHHHHHHHHhhC
Q 004994 693 DIISRCVQWEPGFRPPMSEIVQDLLCMI 720 (720)
Q Consensus 693 ~l~~~cl~~dP~~RPt~~evl~~L~~~~ 720 (720)
+++.+||+.+|++||++.|++++|++++
T Consensus 307 ~l~~~cl~~~p~~RPs~~ell~~l~~~~ 334 (337)
T cd05054 307 SIMLDCWHNNPEDRPTFSELVEILGDLL 334 (337)
T ss_pred HHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 9999999999999999999999999874
No 50
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=4.3e-38 Score=324.68 Aligned_cols=257 Identities=26% Similarity=0.389 Sum_probs=203.4
Q ss_pred cCCCCCCeeccCCCceEEEEEeC----CCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAELP----GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLL 515 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~~----~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~l 515 (720)
++|+..+.||+|+||+||+|.+. +...||||.++... .......|.+|+.++++++||||+++++++.+.+..++
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~i 82 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGS-SDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMI 82 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCC-ChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEE
Confidence 46888899999999999999764 24589999987543 23345678999999999999999999999999999999
Q ss_pred EEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCC
Q 004994 516 VYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLL 595 (720)
Q Consensus 516 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~ 595 (720)
||||+++++|.+++... ...+++..+.+++.+++.||+|||+. +|+||||||+||++++++.+||+|||+++.+
T Consensus 83 v~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~di~p~nili~~~~~~~l~dfg~~~~~ 156 (266)
T cd05033 83 ITEYMENGSLDKFLREN---DGKFTVGQLVGMLRGIASGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLSRRL 156 (266)
T ss_pred EEEcCCCCCHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCCEEECccchhhcc
Confidence 99999999999998643 23688999999999999999999987 8999999999999999999999999999877
Q ss_pred CCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcccccCchhhhhh
Q 004994 596 FSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSR 673 (720)
Q Consensus 596 ~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (720)
.............++..|+|||.. ...++.++||||||+++|||++ |..||........ ...
T Consensus 157 ~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~---~~~------------- 220 (266)
T cd05033 157 EDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDV---IKA------------- 220 (266)
T ss_pred cccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHHH---HHH-------------
Confidence 422211112222345679999988 4578999999999999999998 9999964322111 110
Q ss_pred hcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhC
Q 004994 674 MVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCMI 720 (720)
Q Consensus 674 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~ 720 (720)
+... .....+...+..+.+++.+||+.+|++||+++||+++|+++|
T Consensus 221 ~~~~-~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~~ 266 (266)
T cd05033 221 VEDG-YRLPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKMI 266 (266)
T ss_pred HHcC-CCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhhC
Confidence 0000 000011123467889999999999999999999999999875
No 51
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=5.7e-39 Score=335.77 Aligned_cols=246 Identities=20% Similarity=0.252 Sum_probs=197.6
Q ss_pred cCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEeccccc-ccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVS-QRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVY 517 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 517 (720)
++|...+.||+|+||+||+|.. .+|+.||+|++..... .....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 3678889999999999999965 4689999999864321 2234467889999999999999999999999999999999
Q ss_pred eeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCC
Q 004994 518 DYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFS 597 (720)
Q Consensus 518 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~ 597 (720)
||+++|+|.+++.. ...+++.....++.+++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 81 e~~~~~~L~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~ 153 (291)
T cd05612 81 EYVPGGELFSYLRN----SGRFSNSTGLFYASEIVCALEYLHSK---EIVYRDLKPENILLDKEGHIKLTDFGFAKKLRD 153 (291)
T ss_pred eCCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEEecCcchhccC
Confidence 99999999999853 34678888999999999999999987 999999999999999999999999999986633
Q ss_pred CCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcC
Q 004994 598 GSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVD 676 (720)
Q Consensus 598 ~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (720)
.. ....++..|+|||.+ ...++.++|||||||++|||+||+.||.......... .+..
T Consensus 154 ~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~----------------~i~~ 212 (291)
T cd05612 154 RT-----WTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYE----------------KILA 212 (291)
T ss_pred Cc-----ccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH----------------HHHh
Confidence 21 224578899999988 4468999999999999999999999997543211110 0110
Q ss_pred CCCCchhhHHHHHHHHHHHHHHhccCCCCCCC-----HHHHHHH
Q 004994 677 PSLDGAYLAKSLSRFADIISRCVQWEPGFRPP-----MSEIVQD 715 (720)
Q Consensus 677 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt-----~~evl~~ 715 (720)
... ..+......+.+++.+||+.||.+||+ ++|++++
T Consensus 213 ~~~--~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 254 (291)
T cd05612 213 GKL--EFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNH 254 (291)
T ss_pred CCc--CCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcC
Confidence 000 011122356789999999999999995 8888865
No 52
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=9.7e-39 Score=339.08 Aligned_cols=243 Identities=21% Similarity=0.289 Sum_probs=194.2
Q ss_pred CeeccCCCceEEEEEe-CCCcEEEEEEeccccc-ccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEeeCCCC
Q 004994 446 NFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVS-QRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDYGGNC 523 (720)
Q Consensus 446 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~g 523 (720)
++||+|+||.||+|.. .+|+.||||++++... .......+.+|++++++++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 4699999999999965 5789999999975422 2233456788999999999999999999999999999999999999
Q ss_pred CHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCCCccc
Q 004994 524 TLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNEL 603 (720)
Q Consensus 524 sL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~~~ 603 (720)
+|.+++.. ...+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++..... ...
T Consensus 81 ~L~~~l~~----~~~~~~~~~~~~~~qi~~~L~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~--~~~ 151 (323)
T cd05571 81 ELFFHLSR----ERVFSEDRARFYGAEIVSALGYLHSC---DVVYRDLKLENLMLDKDGHIKITDFGLCKEGISD--GAT 151 (323)
T ss_pred cHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEeeCCCCcccccC--CCc
Confidence 99988853 34688999999999999999999987 9999999999999999999999999999754221 112
Q ss_pred ccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcCCCCCch
Q 004994 604 SEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDGA 682 (720)
Q Consensus 604 ~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 682 (720)
.....++..|+|||.+ ...++.++|||||||++|||+||+.||......... .. +..... .
T Consensus 152 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~---~~-------------~~~~~~--~ 213 (323)
T cd05571 152 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLF---EL-------------ILMEEI--R 213 (323)
T ss_pred ccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHH---HH-------------HHcCCC--C
Confidence 2335688999999998 456899999999999999999999999653221110 00 000000 0
Q ss_pred hhHHHHHHHHHHHHHHhccCCCCCC-----CHHHHHHH
Q 004994 683 YLAKSLSRFADIISRCVQWEPGFRP-----PMSEIVQD 715 (720)
Q Consensus 683 ~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~evl~~ 715 (720)
++.....++.+++.+||+.||++|| ++.+++++
T Consensus 214 ~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h 251 (323)
T cd05571 214 FPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEH 251 (323)
T ss_pred CCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcC
Confidence 1122345788999999999999999 89998864
No 53
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=5.9e-38 Score=322.69 Aligned_cols=255 Identities=24% Similarity=0.349 Sum_probs=203.6
Q ss_pred hcCCCCCCeeccCCCceEEEEEeCCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEe
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYD 518 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 518 (720)
.++|+..+.||+|++|.||+|...+++.||+|.++... ...+++.+|++++++++|+||+++++++...+..++|||
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT---MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTE 81 (261)
T ss_pred hhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc---ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeee
Confidence 35678889999999999999987778899999987532 235678999999999999999999999999999999999
Q ss_pred eCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCC
Q 004994 519 YGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSG 598 (720)
Q Consensus 519 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~ 598 (720)
|+++++|.+++.... ...+++..+..++.+++.||.|||+. +|+||||||+||++++++.+||+|||+++.....
T Consensus 82 ~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~ 156 (261)
T cd05068 82 LMKYGSLLEYLQGGA--GRALKLPQLIDMAAQVASGMAYLEAQ---NYIHRDLAARNVLVGENNICKVADFGLARVIKED 156 (261)
T ss_pred cccCCcHHHHHhccC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCcceEEEcCCCCEEECCcceEEEccCC
Confidence 999999999986432 34688999999999999999999987 8999999999999999999999999999876422
Q ss_pred CCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcccccCchhhhhhhcC
Q 004994 599 STNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVD 676 (720)
Q Consensus 599 ~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (720)
... ...+......|+|||+. ...++.++||||||+++|||+| |+.||...........+ +
T Consensus 157 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~-----------------~ 218 (261)
T cd05068 157 IYE-AREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQV-----------------D 218 (261)
T ss_pred ccc-ccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH-----------------H
Confidence 111 11122234579999988 4578999999999999999999 99999653321111000 0
Q ss_pred CCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 677 PSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 677 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
...........+..+.+++.+|++.+|++||++.++++.|+++
T Consensus 219 ~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~~ 261 (261)
T cd05068 219 QGYRMPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLEDF 261 (261)
T ss_pred cCCCCCCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhcC
Confidence 0000001112346788999999999999999999999999874
No 54
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=6.4e-38 Score=324.40 Aligned_cols=258 Identities=24% Similarity=0.377 Sum_probs=197.9
Q ss_pred CCCCeeccCCCceEEEEEeCC-Cc--EEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccC------CeE
Q 004994 443 SEGNFIGEGLLGSVYKAELPG-GK--LLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEH------GQH 513 (720)
Q Consensus 443 ~~~~~lg~G~~g~Vy~~~~~~-g~--~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~------~~~ 513 (720)
..++.||+|+||.||+|...+ +. .||+|.++.........+.+.+|++++++++|+||+++++++... ...
T Consensus 2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 81 (272)
T cd05075 2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSP 81 (272)
T ss_pred ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCc
Confidence 456889999999999997654 33 699999876544455567889999999999999999999987432 256
Q ss_pred EEEEeeCCCCCHHHHhhccc--hhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccC
Q 004994 514 LLVYDYGGNCTLHDLLHSDE--EAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGL 591 (720)
Q Consensus 514 ~lv~e~~~~gsL~~~l~~~~--~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGl 591 (720)
+++|||+.+|+|.+++.... .....+++.....++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+
T Consensus 82 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~ 158 (272)
T cd05075 82 VVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSK---SFIHRDLAARNCMLNENMNVCVADFGL 158 (272)
T ss_pred EEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhheEEcCCCCEEECCCCc
Confidence 89999999999998874321 1234588999999999999999999986 899999999999999999999999999
Q ss_pred CCCCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcccccCchh
Q 004994 592 APLLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDID 669 (720)
Q Consensus 592 a~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 669 (720)
++.+.............++..|++||.. ...++.++|||||||++|||++ |+.||...........+. ...
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~-------~~~ 231 (272)
T cd05075 159 SKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLR-------QGN 231 (272)
T ss_pred ccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH-------cCC
Confidence 9876443221111222345679999988 4568999999999999999999 899996533211111000 000
Q ss_pred hhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhC
Q 004994 670 ALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCMI 720 (720)
Q Consensus 670 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~ 720 (720)
. .. .....+..+.+++.+||+.||++|||++|+++.|++++
T Consensus 232 ~------~~----~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 272 (272)
T cd05075 232 R------LK----QPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKAL 272 (272)
T ss_pred C------CC----CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhhC
Confidence 0 00 01123356889999999999999999999999999875
No 55
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=3.7e-38 Score=333.73 Aligned_cols=255 Identities=24% Similarity=0.367 Sum_probs=198.4
Q ss_pred cCCCCCCeeccCCCceEEEEEe-CCCc----EEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL-PGGK----LLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHL 514 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~----~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~ 514 (720)
.+|+..+.||+|+||+||+|.+ .++. .||+|.++... .....+++.+|+.+++.++||||++++|+|... ..+
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~ 84 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQ 84 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Cce
Confidence 4688889999999999999965 3343 48999986432 234456789999999999999999999999765 577
Q ss_pred EEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCC
Q 004994 515 LVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPL 594 (720)
Q Consensus 515 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~ 594 (720)
+|+||+++|+|.+++... ...+++....+++.++++||+|||+. +|+||||||+|||+++++.+||+|||+++.
T Consensus 85 ~v~e~~~~g~l~~~l~~~---~~~~~~~~~~~~~~qi~~~L~~LH~~---~iiH~dlkp~Nill~~~~~~kl~DfG~a~~ 158 (316)
T cd05108 85 LITQLMPFGCLLDYVREH---KDNIGSQYLLNWCVQIAKGMNYLEER---RLVHRDLAARNVLVKTPQHVKITDFGLAKL 158 (316)
T ss_pred eeeecCCCCCHHHHHHhc---cccCCHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEecCCCcEEEcccccccc
Confidence 999999999999998643 34578889999999999999999987 999999999999999999999999999987
Q ss_pred CCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcccccCchhhhh
Q 004994 595 LFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALS 672 (720)
Q Consensus 595 ~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (720)
+..............+..|+|||.. ...++.++|||||||++|||+| |+.||....... +...
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~---~~~~------------ 223 (316)
T cd05108 159 LGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---ISSI------------ 223 (316)
T ss_pred ccCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHH---HHHH------------
Confidence 6543322222223345679999988 5678999999999999999998 999996532211 1100
Q ss_pred hhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 673 RMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 673 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
+........+..+...+.+++.+||+.+|++||++.++++.|.++
T Consensus 224 --~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~ 268 (316)
T cd05108 224 --LEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 268 (316)
T ss_pred --HhCCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 000000000111234678999999999999999999999998865
No 56
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=8.4e-38 Score=323.55 Aligned_cols=259 Identities=24% Similarity=0.392 Sum_probs=200.8
Q ss_pred CCCCCeeccCCCceEEEEEeC-C---CcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCe-----
Q 004994 442 FSEGNFIGEGLLGSVYKAELP-G---GKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQ----- 512 (720)
Q Consensus 442 ~~~~~~lg~G~~g~Vy~~~~~-~---g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~----- 512 (720)
|...+.||+|+||.||+|... + +..||+|+++...........+..|++.++.++||||+++++++.+.+.
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 456789999999999999653 2 3689999997544434445688999999999999999999998866543
Q ss_pred -EEEEEeeCCCCCHHHHhhccc--hhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccc
Q 004994 513 -HLLVYDYGGNCTLHDLLHSDE--EAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDC 589 (720)
Q Consensus 513 -~~lv~e~~~~gsL~~~l~~~~--~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DF 589 (720)
.+++|||+++|+|.+++.... .....+++.....++.|++.||.|||+. +++||||||+||++++++.+||+||
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~df 157 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNR---NFIHRDLAARNCMLREDMTVCVADF 157 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchheEEECCCCeEEECCc
Confidence 799999999999999885432 1234688999999999999999999987 8999999999999999999999999
Q ss_pred cCCCCCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcccccCc
Q 004994 590 GLAPLLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHD 667 (720)
Q Consensus 590 Gla~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~ 667 (720)
|+++.+..............+..|+|||.. ...++.++|||||||++|||++ |..||....... ....
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~---~~~~------- 227 (273)
T cd05035 158 GLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHE---IYDY------- 227 (273)
T ss_pred cceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHH---HHHH-------
Confidence 999876443322222222345679999988 4568999999999999999999 999986533211 1111
Q ss_pred hhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhC
Q 004994 668 IDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCMI 720 (720)
Q Consensus 668 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~ 720 (720)
+.... ....+...+.++.+++.+||+.||++|||+.|+++.|++++
T Consensus 228 ------~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~~ 273 (273)
T cd05035 228 ------LRHGN-RLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENIL 273 (273)
T ss_pred ------HHcCC-CCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhhC
Confidence 00000 00011223457889999999999999999999999999874
No 57
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=3e-38 Score=329.87 Aligned_cols=266 Identities=20% Similarity=0.279 Sum_probs=199.0
Q ss_pred cCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEe
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYD 518 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 518 (720)
++|...+.||+|+||+||+|.. .+++.||+|+++.... ......+.+|++++++++||||+++++++...+..++|||
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 83 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHE-EGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFE 83 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEeccccc-CCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEe
Confidence 4688889999999999999965 4689999999874422 2334567899999999999999999999999999999999
Q ss_pred eCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCC
Q 004994 519 YGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSG 598 (720)
Q Consensus 519 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~ 598 (720)
|+++ +|.+++... ...+++.....++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 84 ~~~~-~l~~~l~~~---~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~ 156 (288)
T cd07871 84 YLDS-DLKQYLDNC---GNLMSMHNVKIFMFQLLRGLSYCHKR---KILHRDLKPQNLLINEKGELKLADFGLARAKSVP 156 (288)
T ss_pred CCCc-CHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEECcCcceeeccCC
Confidence 9985 888887532 23578888999999999999999987 9999999999999999999999999999765322
Q ss_pred CCcccccCccccccCCCCccCC--CCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcc--------cccCch
Q 004994 599 STNELSEGLLTAHGSGAPEFES--GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAI--------PRLHDI 668 (720)
Q Consensus 599 ~~~~~~~~~~~~~~~~aPE~~~--~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~--------~~~~~~ 668 (720)
. .......++..|+|||... ..++.++||||+||++|||+||+.||...........+.... +.+...
T Consensus 157 ~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (288)
T cd07871 157 T--KTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSN 234 (288)
T ss_pred C--ccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccc
Confidence 1 1122345688999999873 458999999999999999999999997654322211111000 011111
Q ss_pred hhhhhhcCCCCCch----hhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 669 DALSRMVDPSLDGA----YLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 669 ~~~~~~~~~~~~~~----~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
........+..... .......++.+++.+||+.||.+|||++|+++|
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~h 285 (288)
T cd07871 235 EEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRH 285 (288)
T ss_pred hhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 11111111111000 001123567899999999999999999999875
No 58
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=5.3e-38 Score=326.09 Aligned_cols=260 Identities=22% Similarity=0.348 Sum_probs=201.6
Q ss_pred HhcCCCCCCeeccCCCceEEEEEeC------CCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCC
Q 004994 438 YTNSFSEGNFIGEGLLGSVYKAELP------GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHG 511 (720)
Q Consensus 438 ~~~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~ 511 (720)
.+++|+..+.||+|+||.||+|... .+..||||++..... .....+|.+|+.+++.++||||+++++++.+..
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~-~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~ 82 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAAS-MRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQ 82 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCC-HHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC
Confidence 3567888999999999999998642 356899999864322 234567889999999999999999999999999
Q ss_pred eEEEEEeeCCCCCHHHHhhccchh------ccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeE
Q 004994 512 QHLLVYDYGGNCTLHDLLHSDEEA------HKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVR 585 (720)
Q Consensus 512 ~~~lv~e~~~~gsL~~~l~~~~~~------~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~k 585 (720)
..++||||+++++|.+++...... ...+++..+..++.++++||.|||+. +++||||||+||++++++.+|
T Consensus 83 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~vH~dlkp~Nil~~~~~~~~ 159 (277)
T cd05062 83 PTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVK 159 (277)
T ss_pred CeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCcchheEEEcCCCCEE
Confidence 999999999999999998642211 23467888999999999999999987 899999999999999999999
Q ss_pred EccccCCCCCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhccc
Q 004994 586 VSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIP 663 (720)
Q Consensus 586 l~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~ 663 (720)
|+|||+++.+.............++..|+|||.. .+.++.++|||||||++|||++ |+.||....... ..+..
T Consensus 160 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~---~~~~~-- 234 (277)
T cd05062 160 IGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQ---VLRFV-- 234 (277)
T ss_pred ECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH---HHHHH--
Confidence 9999999866433222111222346789999998 5578999999999999999999 788986533211 11110
Q ss_pred ccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q 004994 664 RLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLC 718 (720)
Q Consensus 664 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 718 (720)
...... ..+...+..+.+++.+||+.||++|||+.|+++.|++
T Consensus 235 -----------~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~ 277 (277)
T cd05062 235 -----------MEGGLL-DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 277 (277)
T ss_pred -----------HcCCcC-CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence 000000 0111234578899999999999999999999999874
No 59
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=1.6e-38 Score=354.48 Aligned_cols=258 Identities=20% Similarity=0.288 Sum_probs=204.3
Q ss_pred HhcCCCCCCeeccCCCceEEEEE-eCCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCC-----
Q 004994 438 YTNSFSEGNFIGEGLLGSVYKAE-LPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHG----- 511 (720)
Q Consensus 438 ~~~~~~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~----- 511 (720)
..++|...+.||+|+||+||+|. ..+|+.||||++............+.+|+.++..++|+||+++++.+...+
T Consensus 30 ~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~ 109 (496)
T PTZ00283 30 QAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPE 109 (496)
T ss_pred cCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcc
Confidence 35688999999999999999995 467999999999755444455567889999999999999999988764322
Q ss_pred ---eEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEcc
Q 004994 512 ---QHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSD 588 (720)
Q Consensus 512 ---~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~D 588 (720)
..++||||+++|+|.+++.........+++.....++.|++.||.|||+. +|+||||||+|||++.++.+||+|
T Consensus 110 ~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~---~IiHrDLKP~NILl~~~~~vkL~D 186 (496)
T PTZ00283 110 NVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSK---HMIHRDIKSANILLCSNGLVKLGD 186 (496)
T ss_pred cceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEeCCCCEEEEe
Confidence 36899999999999999875444456788999999999999999999987 999999999999999999999999
Q ss_pred ccCCCCCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCc
Q 004994 589 CGLAPLLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHD 667 (720)
Q Consensus 589 FGla~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~ 667 (720)
||+++.+.............|++.|+|||.+ ...++.++|||||||++|||++|+.||....... ..
T Consensus 187 FGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~---~~--------- 254 (496)
T PTZ00283 187 FGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEE---VM--------- 254 (496)
T ss_pred cccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH---HH---------
Confidence 9999876433222233345688999999998 4569999999999999999999999996532211 00
Q ss_pred hhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 668 IDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 668 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
......... ..+...++++.+++.+||+.||++||++.+++++
T Consensus 255 ----~~~~~~~~~-~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 255 ----HKTLAGRYD-PLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred ----HHHhcCCCC-CCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 001100000 0112234678899999999999999999999875
No 60
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=1.2e-38 Score=339.08 Aligned_cols=246 Identities=21% Similarity=0.274 Sum_probs=196.9
Q ss_pred cCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccc-cccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTV-SQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVY 517 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~-~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 517 (720)
++|...+.||+|+||+||+|.. .+++.||+|++.+.. ......+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 97 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL 97 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence 4677889999999999999966 468999999987532 12234467889999999999999999999999999999999
Q ss_pred eeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCC
Q 004994 518 DYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFS 597 (720)
Q Consensus 518 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~ 597 (720)
||+.+|+|.+++.. ...+++.....++.+++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 98 e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 170 (329)
T PTZ00263 98 EFVVGGELFTHLRK----AGRFPNDVAKFYHAELVLAFEYLHSK---DIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPD 170 (329)
T ss_pred cCCCCChHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEECCCCCEEEeeccCceEcCC
Confidence 99999999998853 34578888889999999999999987 999999999999999999999999999986633
Q ss_pred CCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcC
Q 004994 598 GSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVD 676 (720)
Q Consensus 598 ~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (720)
.. ....+++.|+|||.+ ...++.++|||||||++|||+||+.||......... ..+..
T Consensus 171 ~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~----------------~~i~~ 229 (329)
T PTZ00263 171 RT-----FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIY----------------EKILA 229 (329)
T ss_pred Cc-----ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHH----------------HHHhc
Confidence 21 124678899999998 456899999999999999999999999653321110 01111
Q ss_pred CCCCchhhHHHHHHHHHHHHHHhccCCCCCCC-----HHHHHHH
Q 004994 677 PSLDGAYLAKSLSRFADIISRCVQWEPGFRPP-----MSEIVQD 715 (720)
Q Consensus 677 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt-----~~evl~~ 715 (720)
.... .+......+.+++.+||+.||.+||+ +++++.|
T Consensus 230 ~~~~--~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h 271 (329)
T PTZ00263 230 GRLK--FPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNH 271 (329)
T ss_pred CCcC--CCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 1000 01112346789999999999999997 6887754
No 61
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=8.1e-38 Score=326.96 Aligned_cols=259 Identities=25% Similarity=0.392 Sum_probs=201.4
Q ss_pred CCCCCCeeccCCCceEEEEEeC------CCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEE
Q 004994 441 SFSEGNFIGEGLLGSVYKAELP------GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHL 514 (720)
Q Consensus 441 ~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~ 514 (720)
+|...+.||+|+||.||+|... ....+|+|.+..... ....+.+..|+++++.++||||+++++.|...+..+
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 79 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENAS-SSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLL 79 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCC-HHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcE
Confidence 3667789999999999999642 235789998875432 233467889999999999999999999999999999
Q ss_pred EEEeeCCCCCHHHHhhccc--------------------hhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCC
Q 004994 515 LVYDYGGNCTLHDLLHSDE--------------------EAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSS 574 (720)
Q Consensus 515 lv~e~~~~gsL~~~l~~~~--------------------~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~ 574 (720)
+++||+.+++|.+++.... .....+++.....++.+++.||+|||+. +++||||||+
T Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~ivH~dikp~ 156 (290)
T cd05045 80 LIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEM---KLVHRDLAAR 156 (290)
T ss_pred EEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHC---Ceehhhhhhh
Confidence 9999999999999886421 1124578999999999999999999987 9999999999
Q ss_pred CeEEcCCCCeEEccccCCCCCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCc
Q 004994 575 NILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPR 652 (720)
Q Consensus 575 NiLl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~ 652 (720)
|||+++++.+||+|||+++...............++..|+|||.. ...++.++||||||+++|||+| |+.||....+.
T Consensus 157 nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~ 236 (290)
T cd05045 157 NVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPE 236 (290)
T ss_pred eEEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHH
Confidence 999999999999999999865433222112223345679999987 5568999999999999999999 99999653321
Q ss_pred cccchhhhcccccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhC
Q 004994 653 GEQSLVRWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCMI 720 (720)
Q Consensus 653 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~ 720 (720)
.. .... ........+...+.++.+++.+||+.+|++||+++|+++.|++++
T Consensus 237 ~~---~~~~--------------~~~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~ 287 (290)
T cd05045 237 RL---FNLL--------------KTGYRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMM 287 (290)
T ss_pred HH---HHHH--------------hCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHH
Confidence 11 1110 000000111223457889999999999999999999999999874
No 62
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.8e-39 Score=306.14 Aligned_cols=256 Identities=25% Similarity=0.342 Sum_probs=207.8
Q ss_pred HHHHHhcCCCCCCeeccCCCceEEEE-EeCCCcEEEEEEeccccccc------ccHHHHHHHHHHHHcc-CCCceeEEEe
Q 004994 434 SLQQYTNSFSEGNFIGEGLLGSVYKA-ELPGGKLLAVKKLSNTVSQR------QTDEEFLELASTISRL-RHGNIVELIG 505 (720)
Q Consensus 434 ~~~~~~~~~~~~~~lg~G~~g~Vy~~-~~~~g~~vavK~l~~~~~~~------~~~~~~~~e~~~l~~l-~H~niv~l~~ 505 (720)
.-..+.+.|...+.||+|..++|-++ ..++|+.+|+|++....... ...+.-+.|+.+|+++ .||||+.+.+
T Consensus 11 aa~~fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D 90 (411)
T KOG0599|consen 11 AAKGFYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQD 90 (411)
T ss_pred hHhhHHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeee
Confidence 34456788889999999999999998 45678999999986432211 1224557889999998 7999999999
Q ss_pred EeccCCeEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeE
Q 004994 506 YCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVR 585 (720)
Q Consensus 506 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~k 585 (720)
+|+.+...++|+|.|+.|.|+|++. ..-.++++...+|+.++.+|++|||.. +||||||||+|||+|++.++|
T Consensus 91 ~yes~sF~FlVFdl~prGELFDyLt----s~VtlSEK~tR~iMrqlfegVeylHa~---~IVHRDLKpENILlddn~~i~ 163 (411)
T KOG0599|consen 91 VYESDAFVFLVFDLMPRGELFDYLT----SKVTLSEKETRRIMRQLFEGVEYLHAR---NIVHRDLKPENILLDDNMNIK 163 (411)
T ss_pred eccCcchhhhhhhhcccchHHHHhh----hheeecHHHHHHHHHHHHHHHHHHHHh---hhhhcccChhheeeccccceE
Confidence 9999999999999999999999995 346788999999999999999999998 999999999999999999999
Q ss_pred EccccCCCCCCCCCCcccccCccccccCCCCccC-------CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchh
Q 004994 586 VSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE-------SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLV 658 (720)
Q Consensus 586 l~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~-------~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~ 658 (720)
|+|||+|+.+.++.. .....||++|.|||.+ ...|+..+|.||+|||||.++.|.+||-......
T Consensus 164 isDFGFa~~l~~Gek---LrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQml----- 235 (411)
T KOG0599|consen 164 ISDFGFACQLEPGEK---LRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQML----- 235 (411)
T ss_pred EeccceeeccCCchh---HHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHH-----
Confidence 999999999876643 3457899999999976 1348889999999999999999999995422110
Q ss_pred hhcccccCchhhhhhhcCCC--CCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 659 RWAIPRLHDIDALSRMVDPS--LDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 659 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.++.+.... +....+++......+|+.+||+.||.+|.|++|+++|
T Consensus 236 -----------MLR~ImeGkyqF~speWadis~~~KdLIsrlLqVdp~~Ritake~LaH 283 (411)
T KOG0599|consen 236 -----------MLRMIMEGKYQFRSPEWADISATVKDLISRLLQVDPTKRITAKEALAH 283 (411)
T ss_pred -----------HHHHHHhcccccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhcC
Confidence 111111111 1222345566778899999999999999999999875
No 63
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=7.7e-38 Score=322.27 Aligned_cols=254 Identities=25% Similarity=0.407 Sum_probs=202.0
Q ss_pred CCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEee
Q 004994 441 SFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDY 519 (720)
Q Consensus 441 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 519 (720)
+|...+.||+|+||.||+|.. +.++.||+|.+... ....+++.+|++++++++|+||+++++++...+..++||||
T Consensus 7 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (263)
T cd05052 7 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED---TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF 83 (263)
T ss_pred HeEEeeecCCcccceEEEEEEecCCceEEEEEecCC---chHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEe
Confidence 466778999999999999965 46889999998643 23356789999999999999999999999999999999999
Q ss_pred CCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCC
Q 004994 520 GGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGS 599 (720)
Q Consensus 520 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~ 599 (720)
+++++|.+++.... ...+++..+..++.|+++||+|||.. +++||||||+||++++++.+||+|||++.......
T Consensus 84 ~~~~~L~~~~~~~~--~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~ 158 (263)
T cd05052 84 MTYGNLLDYLRECN--RQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 158 (263)
T ss_pred CCCCcHHHHHHhCC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCcEEeCCCccccccccce
Confidence 99999999985422 34588999999999999999999987 89999999999999999999999999998764322
Q ss_pred CcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcccccCchhhhhhhcCC
Q 004994 600 TNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDP 677 (720)
Q Consensus 600 ~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (720)
.. .......+..|+|||.. ...++.++|||||||++|||++ |..||.......... .+..
T Consensus 159 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~-------------~~~~---- 220 (263)
T cd05052 159 YT-AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE-------------LLEK---- 220 (263)
T ss_pred ee-ccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH-------------HHHC----
Confidence 11 11122335679999987 5578999999999999999998 999986532211100 0000
Q ss_pred CCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhC
Q 004994 678 SLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCMI 720 (720)
Q Consensus 678 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~ 720 (720)
......+...+.++.+++.+||+.||++|||+.|+++.|++++
T Consensus 221 ~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~~ 263 (263)
T cd05052 221 GYRMERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETMF 263 (263)
T ss_pred CCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhhC
Confidence 0011111223467889999999999999999999999999874
No 64
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=6.7e-38 Score=322.24 Aligned_cols=254 Identities=24% Similarity=0.356 Sum_probs=203.1
Q ss_pred cCCCCCCeeccCCCceEEEEEeCCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEee
Q 004994 440 NSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDY 519 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 519 (720)
++|+..+.||+|+||.||+|...++..||+|.+... ....+.+.+|+.++++++|+||+++++++.+.+..+++|||
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 82 (261)
T cd05072 6 ESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPG---TMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEY 82 (261)
T ss_pred HHeEEeeecCCcCCceEEEEEecCCceEEEEEccCC---chhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEec
Confidence 467788999999999999998888889999998643 22356889999999999999999999999999999999999
Q ss_pred CCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCC
Q 004994 520 GGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGS 599 (720)
Q Consensus 520 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~ 599 (720)
+++++|.++++.. ....+++..+..++.++++||+|||+. +++||||||+||++++++.+||+|||+++......
T Consensus 83 ~~~~~L~~~l~~~--~~~~~~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~ 157 (261)
T cd05072 83 MAKGSLLDFLKSD--EGGKVLLPKLIDFSAQIAEGMAYIERK---NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNE 157 (261)
T ss_pred CCCCcHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEecCCCcEEECCCccceecCCCc
Confidence 9999999998643 234678889999999999999999987 89999999999999999999999999998764322
Q ss_pred CcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcccccCchhhhhhhcCC
Q 004994 600 TNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDP 677 (720)
Q Consensus 600 ~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (720)
.. ......++..|+|||+. .+.++.++|||||||++|||+| |+.||........ .... ......
T Consensus 158 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~---~~~~----------~~~~~~ 223 (261)
T cd05072 158 YT-AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDV---MSAL----------QRGYRM 223 (261)
T ss_pred ee-ccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHH---HHHH----------HcCCCC
Confidence 11 11223345679999987 5678999999999999999998 9999965332111 1110 000000
Q ss_pred CCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 678 SLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 678 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
.. ....+.++.+++.+|++.+|++||+++++.+.|+++
T Consensus 224 ~~----~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 261 (261)
T cd05072 224 PR----MENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDDF 261 (261)
T ss_pred CC----CCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhcC
Confidence 00 112335688999999999999999999999999874
No 65
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=1.2e-37 Score=321.42 Aligned_cols=261 Identities=19% Similarity=0.299 Sum_probs=205.2
Q ss_pred cCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccc-cccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTV-SQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVY 517 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~-~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 517 (720)
++|+..+.||+|+||.||+|.. .+++.||||.+.... ........+.+|++++++++||||+++++++.+.+..++|+
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 4688889999999999999965 578999999886422 22334467889999999999999999999999999999999
Q ss_pred eeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCC
Q 004994 518 DYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFS 597 (720)
Q Consensus 518 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~ 597 (720)
||+++++|.+++.........+++.....++.++++||.|||+. +++||||||+||+++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~ 158 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCCHHHEEEcCCCCEEECccccceeccc
Confidence 99999999998864333345578888999999999999999987 999999999999999999999999999887643
Q ss_pred CCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcC
Q 004994 598 GSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVD 676 (720)
Q Consensus 598 ~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (720)
... ......++..|+|||.. ...++.++|+||||+++|||++|+.||....... ..... .+.....
T Consensus 159 ~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~-~~~~~----------~~~~~~~ 225 (267)
T cd08228 159 KTT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNL-FSLCQ----------KIEQCDY 225 (267)
T ss_pred hhH--HHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccH-HHHHH----------HHhcCCC
Confidence 221 12234567789999987 4568899999999999999999999986432110 00110 0000001
Q ss_pred CCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 677 PSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 677 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
+.. .....+..+.+++.+||+.+|++||+++||++.+++|
T Consensus 226 ~~~---~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~ 265 (267)
T cd08228 226 PPL---PTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQM 265 (267)
T ss_pred CCC---ChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHh
Confidence 111 1123446788999999999999999999999999876
No 66
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-38 Score=337.29 Aligned_cols=243 Identities=24% Similarity=0.290 Sum_probs=199.9
Q ss_pred hcCCCCCCeeccCCCceEEEEEeC-CCcEEEEEEecccc-cccccHHHHHHHHHHHHcc-CCCceeEEEeEeccCCeEEE
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTV-SQRQTDEEFLELASTISRL-RHGNIVELIGYCNEHGQHLL 515 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~-~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~l 515 (720)
.++|...++||+|+||+|+++..+ +++.||||++++.. ..+.+.+....|-+++... +||.++.++..|...+++|.
T Consensus 367 l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~f 446 (694)
T KOG0694|consen 367 LDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLFF 446 (694)
T ss_pred ccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEEE
Confidence 467888999999999999999764 68899999998763 4556677888888888777 59999999999999999999
Q ss_pred EEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCC
Q 004994 516 VYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLL 595 (720)
Q Consensus 516 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~ 595 (720)
||||+.||++..+.+ ...|+.....-++..|+.||+|||+. +|||||||-+|||||.+|++||+|||+++..
T Consensus 447 vmey~~Ggdm~~~~~-----~~~F~e~rarfyaAev~l~L~fLH~~---~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~ 518 (694)
T KOG0694|consen 447 VMEYVAGGDLMHHIH-----TDVFSEPRARFYAAEVVLGLQFLHEN---GIIYRDLKLDNLLLDTEGHVKIADFGLCKEG 518 (694)
T ss_pred EEEecCCCcEEEEEe-----cccccHHHHHHHHHHHHHHHHHHHhc---CceeeecchhheEEcccCcEEeccccccccc
Confidence 999999999544332 35688888889999999999999997 9999999999999999999999999999864
Q ss_pred CCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhh
Q 004994 596 FSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRM 674 (720)
Q Consensus 596 ~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (720)
-. ....+..+.||+.|+|||++ ...|+..+|+|||||+||||+.|+.||.+.++++.. +.+
T Consensus 519 m~--~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~F----------------dsI 580 (694)
T KOG0694|consen 519 MG--QGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVF----------------DSI 580 (694)
T ss_pred CC--CCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHH----------------HHH
Confidence 21 22345668899999999999 457999999999999999999999999865432211 111
Q ss_pred cCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCH
Q 004994 675 VDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPM 709 (720)
Q Consensus 675 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~ 709 (720)
+.. +..|+.-.+.+..++++++|.++|++|.-+
T Consensus 581 ~~d--~~~yP~~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 581 VND--EVRYPRFLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred hcC--CCCCCCcccHHHHHHHHHHhccCcccccCC
Confidence 111 112444455778899999999999999866
No 67
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=1e-37 Score=319.99 Aligned_cols=250 Identities=23% Similarity=0.413 Sum_probs=198.5
Q ss_pred cCCCCCCeeccCCCceEEEEEeCCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEee
Q 004994 440 NSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDY 519 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 519 (720)
++|+..+.||+|+||.||++.++++..+|+|.+... ....+.|..|++++++++||||+++++++.+.+..++||||
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~ 80 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEG---AMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEF 80 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccC---CccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEc
Confidence 346777899999999999998888889999998643 23346788999999999999999999999999999999999
Q ss_pred CCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCC
Q 004994 520 GGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGS 599 (720)
Q Consensus 520 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~ 599 (720)
+++|+|.++++... ..+++..+..++.+++.||.|||+. +|+||||||+||++++++.+||+|||.++......
T Consensus 81 ~~~~~L~~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~ 154 (256)
T cd05114 81 MENGCLLNYLRQRQ---GKLSKDMLLSMCQDVCEGMEYLERN---SFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDE 154 (256)
T ss_pred CCCCcHHHHHHhCc---cCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcceEEEcCCCeEEECCCCCccccCCCc
Confidence 99999999886432 3588999999999999999999987 89999999999999999999999999998653322
Q ss_pred CcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcccccCchhhhhhhcCC
Q 004994 600 TNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDP 677 (720)
Q Consensus 600 ~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (720)
.. ......++..|+|||.. ...++.++||||||+++|||++ |+.||....... ........ .....+
T Consensus 155 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~---~~~~i~~~-------~~~~~~ 223 (256)
T cd05114 155 YT-SSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYE---VVEMISRG-------FRLYRP 223 (256)
T ss_pred ee-ccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHH---HHHHHHCC-------CCCCCC
Confidence 11 11122345679999998 4568999999999999999999 999996543211 11111000 000011
Q ss_pred CCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q 004994 678 SLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDL 716 (720)
Q Consensus 678 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L 716 (720)
. ..+.++.+++.+||+.+|++||+++|+++.|
T Consensus 224 ~-------~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 224 K-------LASMTVYEVMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred C-------CCCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 1 1235688999999999999999999999886
No 68
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=3e-38 Score=337.76 Aligned_cols=266 Identities=20% Similarity=0.335 Sum_probs=195.5
Q ss_pred CCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccC-----CeEE
Q 004994 441 SFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEH-----GQHL 514 (720)
Q Consensus 441 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~-----~~~~ 514 (720)
+|+..+.||+|+||.||+|.. .+|+.||||++............+.+|++++++++||||+++++++... ...+
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 367778999999999999964 5789999999875433334456788999999999999999999987532 3579
Q ss_pred EEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCC
Q 004994 515 LVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPL 594 (720)
Q Consensus 515 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~ 594 (720)
+||||++ ++|.+++.. ...+++.....++.|+++||.|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 81 lv~e~~~-~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~ 152 (338)
T cd07859 81 VVFELME-SDLHQVIKA----NDDLTPEHHQFFLYQLLRALKYIHTA---NVFHRDLKPKNILANADCKLKICDFGLARV 152 (338)
T ss_pred EEEecCC-CCHHHHHHh----cccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEccCccccc
Confidence 9999996 588888753 34588999999999999999999987 999999999999999999999999999986
Q ss_pred CCCCCC-cccccCccccccCCCCccCC---CCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhh
Q 004994 595 LFSGST-NELSEGLLTAHGSGAPEFES---GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDA 670 (720)
Q Consensus 595 ~~~~~~-~~~~~~~~~~~~~~aPE~~~---~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~ 670 (720)
...... ........++..|+|||.+. ..++.++|||||||++|||+||+.||...........+...... .....
T Consensus 153 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~-~~~~~ 231 (338)
T cd07859 153 AFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGT-PSPET 231 (338)
T ss_pred cccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCC-CCHHH
Confidence 532221 11223456889999999873 46899999999999999999999999754321111000000000 00000
Q ss_pred hhhh-----------cCCCCCchh---hHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 671 LSRM-----------VDPSLDGAY---LAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 671 ~~~~-----------~~~~~~~~~---~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
...+ +........ .......+.+++.+||+.||++|||++|++++
T Consensus 232 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h 290 (338)
T cd07859 232 ISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALAD 290 (338)
T ss_pred HHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 0000 000000000 01123567899999999999999999999975
No 69
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=5.5e-38 Score=328.74 Aligned_cols=261 Identities=24% Similarity=0.394 Sum_probs=204.0
Q ss_pred hcCCCCCCeeccCCCceEEEEEeC------CCcEEEEEEecccccccccHHHHHHHHHHHHcc-CCCceeEEEeEeccCC
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAELP------GGKLLAVKKLSNTVSQRQTDEEFLELASTISRL-RHGNIVELIGYCNEHG 511 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~ 511 (720)
.++|+..+.||+|+||.||++... ....+|+|.+..... .....++.+|+++++++ +|+||+++++++...+
T Consensus 11 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~ 89 (293)
T cd05053 11 RDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDAT-EKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEG 89 (293)
T ss_pred HhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCC-HHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCC
Confidence 456778899999999999999653 236899999875432 23345688999999999 8999999999999999
Q ss_pred eEEEEEeeCCCCCHHHHhhccc------------hhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEc
Q 004994 512 QHLLVYDYGGNCTLHDLLHSDE------------EAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLD 579 (720)
Q Consensus 512 ~~~lv~e~~~~gsL~~~l~~~~------------~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~ 579 (720)
..+++|||+++|+|.++++... .....+++..+..++.|++.||.|||+. +|+||||||+||+++
T Consensus 90 ~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~Nil~~ 166 (293)
T cd05053 90 PLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASK---KCIHRDLAARNVLVT 166 (293)
T ss_pred CeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CccccccceeeEEEc
Confidence 9999999999999999986421 2245688999999999999999999987 999999999999999
Q ss_pred CCCCeEEccccCCCCCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccch
Q 004994 580 EKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSL 657 (720)
Q Consensus 580 ~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~ 657 (720)
+++.+||+|||+++.+.............++..|+|||.. ...++.++|||||||++|||++ |..||...........
T Consensus 167 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~ 246 (293)
T cd05053 167 EDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKL 246 (293)
T ss_pred CCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHHHHHH
Confidence 9999999999999876543222112222345679999987 5578999999999999999997 9999864322111100
Q ss_pred hhhcccccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhC
Q 004994 658 VRWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCMI 720 (720)
Q Consensus 658 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~ 720 (720)
+........+......+.+++.+||..||++|||++|+++.|++++
T Consensus 247 -----------------~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 247 -----------------LKEGYRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred -----------------HHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 0000000111223457889999999999999999999999999875
No 70
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=2e-38 Score=338.38 Aligned_cols=253 Identities=20% Similarity=0.286 Sum_probs=201.1
Q ss_pred cCCCCCCeeccCCCceEEEEEeC-CCcEEEEEEecccccc-cccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQ-RQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVY 517 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 517 (720)
++|...+.||+|+||.||+|... +++.||||++.+.... ....+.+..|++++..++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 36788899999999999999764 6899999999754321 234467889999999999999999999999999999999
Q ss_pred eeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCC
Q 004994 518 DYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFS 597 (720)
Q Consensus 518 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~ 597 (720)
||+++|+|.+++.. ...+++.....++.+++.||.|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 81 e~~~g~~L~~~l~~----~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~ 153 (333)
T cd05600 81 EYVPGGDFRTLLNN----LGVLSEDHARFYMAEMFEAVDALHEL---GYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT 153 (333)
T ss_pred eCCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEEEeCcCCccccc
Confidence 99999999999853 34578888999999999999999987 999999999999999999999999999976532
Q ss_pred CCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccc-hhhhcccccCchhhhhhhc
Q 004994 598 GSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQS-LVRWAIPRLHDIDALSRMV 675 (720)
Q Consensus 598 ~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 675 (720)
......++..|+|||++ ...++.++|||||||++|||++|+.||.......... +..|.. .+.
T Consensus 154 -----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~-~~~--------- 218 (333)
T cd05600 154 -----YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKE-TLQ--------- 218 (333)
T ss_pred -----ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccc-ccc---------
Confidence 22345688999999998 4578999999999999999999999997643322111 111100 000
Q ss_pred CCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 676 DPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 676 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.+... ......+.++.+++.+||..+|.+||+++|++++
T Consensus 219 ~~~~~-~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 219 RPVYD-DPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred CCCCC-ccccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 00000 0001234678899999999999999999999976
No 71
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=7.2e-38 Score=333.67 Aligned_cols=266 Identities=20% Similarity=0.324 Sum_probs=199.7
Q ss_pred hcCCCCCCeeccCCCceEEEEEeC-CCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEE
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVY 517 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 517 (720)
.++|+..+.||+|+||.||++... ++..+|+|.+..... ....+.+.+|++++++++|+||++++++|.+.+..++||
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 82 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIK-PAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM 82 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccC-HHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEE
Confidence 367889999999999999999664 688999998875432 234567899999999999999999999999999999999
Q ss_pred eeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCC
Q 004994 518 DYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFS 597 (720)
Q Consensus 518 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~ 597 (720)
||+++|+|.+++.. ...+++.....++.+++.||.|||+.+ +|+||||||+|||++.++.+||+|||++..+..
T Consensus 83 e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~l~~~l~~lH~~~--~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~ 156 (333)
T cd06650 83 EHMDGGSLDQVLKK----AGRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 156 (333)
T ss_pred ecCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChhhEEEcCCCCEEEeeCCcchhhhh
Confidence 99999999999853 345788888999999999999999742 699999999999999999999999999976532
Q ss_pred CCCcccccCccccccCCCCccCC-CCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhh----hcc------cccC
Q 004994 598 GSTNELSEGLLTAHGSGAPEFES-GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVR----WAI------PRLH 666 (720)
Q Consensus 598 ~~~~~~~~~~~~~~~~~aPE~~~-~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~----~~~------~~~~ 666 (720)
. ......++..|+|||... ..++.++|||||||++|||++|+.||............. ... +...
T Consensus 157 ~----~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (333)
T cd06650 157 S----MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPR 232 (333)
T ss_pred h----ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccC
Confidence 2 122345788999999984 468999999999999999999999997533211110000 000 0000
Q ss_pred ch--------------hhh----hhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 667 DI--------------DAL----SRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 667 ~~--------------~~~----~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.. ... ..+...............++.+|+.+||+.||++|||++|++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h 299 (333)
T cd06650 233 PPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVH 299 (333)
T ss_pred CccchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhC
Confidence 00 000 00000000000000123568899999999999999999999865
No 72
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-39 Score=303.19 Aligned_cols=265 Identities=23% Similarity=0.306 Sum_probs=207.7
Q ss_pred HhcCCCCCCeeccCCCceEEEEE-eCCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccC-----C
Q 004994 438 YTNSFSEGNFIGEGLLGSVYKAE-LPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEH-----G 511 (720)
Q Consensus 438 ~~~~~~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~-----~ 511 (720)
..++|.+.+.||+|||+-||.++ ..+++.||+|++.-. ...+.+..++|++..++++||||+++++++..+ .
T Consensus 19 n~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~--~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~ 96 (302)
T KOG2345|consen 19 NNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCH--SQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKH 96 (302)
T ss_pred cCceEEEeeeecCCCceeeeeecccCcccchhhheeecc--chHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCce
Confidence 45688999999999999999995 678999999999633 245667889999999999999999999987433 3
Q ss_pred eEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccC
Q 004994 512 QHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGL 591 (720)
Q Consensus 512 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGl 591 (720)
+.|++++|...|+|.+.+.........+++.+.++|+.++.+||.+||+. .+++.||||||.|||+.+++.+++.|||.
T Consensus 97 ~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls~~~~~vl~D~GS 175 (302)
T KOG2345|consen 97 EAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEK-EPPYAHRDIKPANILLSDSGLPVLMDLGS 175 (302)
T ss_pred eEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEecCCCceEEEeccC
Confidence 58999999999999999987666666899999999999999999999997 45799999999999999999999999999
Q ss_pred CCCCCCCCCc-----cc--ccCccccccCCCCccCC----CCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhh
Q 004994 592 APLLFSGSTN-----EL--SEGLLTAHGSGAPEFES----GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRW 660 (720)
Q Consensus 592 a~~~~~~~~~-----~~--~~~~~~~~~~~aPE~~~----~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~ 660 (720)
++...-.-.. .. ......|..|+|||.+. ...++++|||||||+||+|+.|..||+.....+. .+.-.
T Consensus 176 ~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~Gg-SlaLA 254 (302)
T KOG2345|consen 176 ATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGG-SLALA 254 (302)
T ss_pred ccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCC-eEEEe
Confidence 8765311000 00 11223477899999983 2478999999999999999999999975433221 11100
Q ss_pred cc-cccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhC
Q 004994 661 AI-PRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCMI 720 (720)
Q Consensus 661 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~ 720 (720)
+. +++. -|. ....++.+.+++++|++.||.+||++.+++..+.+++
T Consensus 255 v~n~q~s---------~P~-----~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~Li 301 (302)
T KOG2345|consen 255 VQNAQIS---------IPN-----SSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDLI 301 (302)
T ss_pred eeccccc---------cCC-----CCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence 00 0000 000 0113467899999999999999999999999998764
No 73
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=1.1e-38 Score=327.56 Aligned_cols=249 Identities=34% Similarity=0.524 Sum_probs=190.7
Q ss_pred CCeeccCCCceEEEEEeC-----CCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEee
Q 004994 445 GNFIGEGLLGSVYKAELP-----GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDY 519 (720)
Q Consensus 445 ~~~lg~G~~g~Vy~~~~~-----~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 519 (720)
.+.||.|.||.||+|.+. .+..|+||.++.. ......++|.+|++.+++++||||++++|+|...+..++||||
T Consensus 4 ~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~-~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~ 82 (259)
T PF07714_consen 4 IKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPS-SSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEY 82 (259)
T ss_dssp EEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTT-SSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE-
T ss_pred eeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccc-cccccceeeeecccccccccccccccccccccccccccccccc
Confidence 367999999999999765 3578999999653 2234468899999999999999999999999988889999999
Q ss_pred CCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCC
Q 004994 520 GGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGS 599 (720)
Q Consensus 520 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~ 599 (720)
+++|+|.+++... ....+++..+.+|+.|+++||+|||+. +++|+||+++||+++.++.+||+|||+++......
T Consensus 83 ~~~g~L~~~L~~~--~~~~~~~~~~~~i~~~i~~~l~~Lh~~---~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~ 157 (259)
T PF07714_consen 83 CPGGSLDDYLKSK--NKEPLSEQQRLSIAIQIAEALSYLHSN---NIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKS 157 (259)
T ss_dssp -TTEBHHHHHHHT--CTTTSBHHHHHHHHHHHHHHHHHHHHT---TEEEST-SGGGEEEETTTEEEEESTTTGEETTTSS
T ss_pred ccccccccccccc--ccccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccccc
Confidence 9999999999753 235689999999999999999999997 89999999999999999999999999998763322
Q ss_pred CcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcccccCchhhhhhhcCC
Q 004994 600 TNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDP 677 (720)
Q Consensus 600 ~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (720)
.............|+|||.. ...++.++||||||+++|||+| |+.||....... +.. .+.+.
T Consensus 158 ~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~---~~~-------------~~~~~ 221 (259)
T PF07714_consen 158 KYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEE---IIE-------------KLKQG 221 (259)
T ss_dssp SEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHH---HHH-------------HHHTT
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccc---ccc-------------ccccc
Confidence 22233334456789999998 5568999999999999999999 789986542211 111 11000
Q ss_pred CCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q 004994 678 SLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDL 716 (720)
Q Consensus 678 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L 716 (720)
.. ...+..++..+.+++.+||+.||++|||++++++.|
T Consensus 222 ~~-~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 222 QR-LPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp EE-TTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred cc-ceeccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 00 001112345688999999999999999999999986
No 74
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=1.4e-37 Score=318.09 Aligned_cols=249 Identities=24% Similarity=0.411 Sum_probs=194.8
Q ss_pred CeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEeeCCCCC
Q 004994 446 NFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDYGGNCT 524 (720)
Q Consensus 446 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gs 524 (720)
+.||+|+||.||+|.. .+++.||+|.+.... .......|.+|++++++++||||++++++|...+..++||||+++++
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 79 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETL-PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGD 79 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccC-CHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCc
Confidence 3699999999999965 578999999986443 23345678999999999999999999999999999999999999999
Q ss_pred HHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCCCcccc
Q 004994 525 LHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELS 604 (720)
Q Consensus 525 L~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~~~~ 604 (720)
|.+++... ...+++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++............
T Consensus 80 L~~~~~~~---~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 153 (252)
T cd05084 80 FLTFLRTE---GPRLKVKELIQMVENAAAGMEYLESK---HCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTG 153 (252)
T ss_pred HHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEEcCCCcEEECccccCcccccccccccC
Confidence 99998532 24578999999999999999999987 8999999999999999999999999998765322111111
Q ss_pred cCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcccccCchhhhhhhcCCCCCch
Q 004994 605 EGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDGA 682 (720)
Q Consensus 605 ~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 682 (720)
........|+|||.. .+.++.++|||||||++|||++ |..||.......... .+.......
T Consensus 154 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~-----------------~~~~~~~~~ 216 (252)
T cd05084 154 GMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTRE-----------------AIEQGVRLP 216 (252)
T ss_pred CCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHH-----------------HHHcCCCCC
Confidence 111223569999988 5678999999999999999998 999986432211110 000011111
Q ss_pred hhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q 004994 683 YLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLC 718 (720)
Q Consensus 683 ~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 718 (720)
.+...+..+.+++.+|++.+|++|||+.|+++.|++
T Consensus 217 ~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~ 252 (252)
T cd05084 217 CPELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQS 252 (252)
T ss_pred CcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhC
Confidence 122234578899999999999999999999999863
No 75
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=1.4e-37 Score=323.15 Aligned_cols=255 Identities=27% Similarity=0.423 Sum_probs=197.2
Q ss_pred cCCCCCCeeccCCCceEEEEEe-CCCc----EEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL-PGGK----LLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHL 514 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~----~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~ 514 (720)
++|...+.||+|+||+||+|.+ .+++ .|++|.+.... ......++..|+.++++++||||+++++++.. ...+
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-~~~~ 84 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRS-GRQTFQEITDHMLAMGSLDHAYIVRLLGICPG-ASLQ 84 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeeccccc-chHHHHHHHHHHHHHhcCCCCCcceEEEEECC-CccE
Confidence 3577789999999999999965 3454 47777775322 22334577888889999999999999999864 4578
Q ss_pred EEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCC
Q 004994 515 LVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPL 594 (720)
Q Consensus 515 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~ 594 (720)
+++||+++|+|.+++... ...+++.....++.|++.||+|||+. +++||||||+|||+++++.+||+|||+++.
T Consensus 85 ~i~e~~~~gsL~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~kl~Dfg~~~~ 158 (279)
T cd05111 85 LVTQLSPLGSLLDHVRQH---RDSLDPQRLLNWCVQIAKGMYYLEEH---RMVHRNLAARNILLKSDSIVQIADFGVADL 158 (279)
T ss_pred EEEEeCCCCcHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEEcCCcccee
Confidence 899999999999998632 34688999999999999999999987 899999999999999999999999999987
Q ss_pred CCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcccccCchhhhh
Q 004994 595 LFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALS 672 (720)
Q Consensus 595 ~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (720)
+.............++..|++||.. .+.++.++|||||||++||++| |+.||..........++. .. .
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~-------~~---~ 228 (279)
T cd05111 159 LYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLLE-------KG---E 228 (279)
T ss_pred ccCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH-------CC---C
Confidence 6543332233334566789999988 5679999999999999999998 999996543221111110 00 0
Q ss_pred hhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 673 RMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 673 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
....+. .+...+.+++.+||..||++|||+.|+++.|+.|
T Consensus 229 ~~~~~~-------~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~ 268 (279)
T cd05111 229 RLAQPQ-------ICTIDVYMVMVKCWMIDENVRPTFKELANEFTRM 268 (279)
T ss_pred cCCCCC-------CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence 000111 1224567899999999999999999999999875
No 76
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=7.2e-38 Score=327.32 Aligned_cols=267 Identities=19% Similarity=0.298 Sum_probs=194.5
Q ss_pred cCCCCCCeeccCCCceEEEEEe--CCCcEEEEEEecccccccccHHHHHHHHHHHHcc---CCCceeEEEeEec-----c
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL--PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRL---RHGNIVELIGYCN-----E 509 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~--~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l---~H~niv~l~~~~~-----~ 509 (720)
++|...+.||+|+||+||+|.. .+++.||+|+++...........+.+|+++++.+ +||||++++++|. .
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 3688889999999999999965 3478899999875443333445566777776665 6999999999885 3
Q ss_pred CCeEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccc
Q 004994 510 HGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDC 589 (720)
Q Consensus 510 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DF 589 (720)
....++||||++ ++|.+++.... ...+++..+..++.|+++||.|||+. +|+||||||+|||++.++.+||+||
T Consensus 81 ~~~~~lv~e~~~-~~l~~~~~~~~--~~~~~~~~~~~i~~qi~~aL~~lH~~---~iiH~dlkp~Nil~~~~~~~kl~Df 154 (290)
T cd07862 81 ETKLTLVFEHVD-QDLTTYLDKVP--EPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADF 154 (290)
T ss_pred CCcEEEEEccCC-CCHHHHHHhCC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEcCCCCEEEccc
Confidence 456899999997 58988885422 34578899999999999999999987 9999999999999999999999999
Q ss_pred cCCCCCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCcccc-chhhhcc-cccC
Q 004994 590 GLAPLLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQ-SLVRWAI-PRLH 666 (720)
Q Consensus 590 Gla~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~-~~~~~~~-~~~~ 666 (720)
|+++..... .......++..|+|||.. ...++.++|||||||++|||++|+.||......+.. .+..... +.-.
T Consensus 155 g~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~ 231 (290)
T cd07862 155 GLARIYSFQ---MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEE 231 (290)
T ss_pred cceEeccCC---cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChh
Confidence 999765322 223345678899999988 557899999999999999999999999764432211 1111100 0000
Q ss_pred chhh----hhhhcCCCCC---chhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 667 DIDA----LSRMVDPSLD---GAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 667 ~~~~----~~~~~~~~~~---~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
+... ......+... ..........+.+++.+||+.||++|||+.|++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~h 287 (290)
T cd07862 232 DWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 287 (290)
T ss_pred hchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcC
Confidence 0000 0000000000 00111234567899999999999999999999874
No 77
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=5.6e-38 Score=333.75 Aligned_cols=243 Identities=22% Similarity=0.278 Sum_probs=193.9
Q ss_pred CeeccCCCceEEEEEe-CCCcEEEEEEeccccc-ccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEeeCCCC
Q 004994 446 NFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVS-QRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDYGGNC 523 (720)
Q Consensus 446 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~g 523 (720)
+.||+|+||.||++.. .+|+.||+|++.+... .......+.+|+++++.++||||+++++++.+.+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 4699999999999964 5789999999975432 2334467889999999999999999999999999999999999999
Q ss_pred CHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCCCccc
Q 004994 524 TLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNEL 603 (720)
Q Consensus 524 sL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~~~ 603 (720)
+|.+++.. ...+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...... ..
T Consensus 81 ~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~--~~ 151 (328)
T cd05593 81 ELFFHLSR----ERVFSEDRTRFYGAEIVSALDYLHSG---KIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDA--AT 151 (328)
T ss_pred CHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeEECCCCcEEEecCcCCccCCCcc--cc
Confidence 99988753 34688999999999999999999987 99999999999999999999999999987542211 11
Q ss_pred ccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcCCCCCch
Q 004994 604 SEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDGA 682 (720)
Q Consensus 604 ~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 682 (720)
.....++..|+|||.+ ...++.++|||||||++|||++|+.||...........+.. .+..
T Consensus 152 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~--------------~~~~---- 213 (328)
T cd05593 152 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM--------------EDIK---- 213 (328)
T ss_pred cccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhcc--------------CCcc----
Confidence 2235688999999998 55789999999999999999999999965332111100000 0001
Q ss_pred hhHHHHHHHHHHHHHHhccCCCCCC-----CHHHHHHH
Q 004994 683 YLAKSLSRFADIISRCVQWEPGFRP-----PMSEIVQD 715 (720)
Q Consensus 683 ~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~evl~~ 715 (720)
.+.....++.+++.+||+.||++|| ++.|++++
T Consensus 214 ~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 214 FPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred CCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence 1112335678999999999999997 89999865
No 78
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=7.6e-38 Score=339.56 Aligned_cols=261 Identities=24% Similarity=0.369 Sum_probs=201.7
Q ss_pred cCCCCCCeeccCCCceEEEEEeC------CCcEEEEEEecccccccccHHHHHHHHHHHHccC-CCceeEEEeEeccCCe
Q 004994 440 NSFSEGNFIGEGLLGSVYKAELP------GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLR-HGNIVELIGYCNEHGQ 512 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~~~~~~~~~ 512 (720)
++|...+.||+|+||.||+|.+. .++.||+|+++.... ....+.+.+|++++.++. |||||+++++|...+.
T Consensus 37 ~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~-~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~ 115 (401)
T cd05107 37 DNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTAR-SSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGP 115 (401)
T ss_pred HHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCC-hhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCC
Confidence 45677899999999999999753 346899999975432 233457889999999997 9999999999999999
Q ss_pred EEEEEeeCCCCCHHHHhhccch----------------------------------------------------------
Q 004994 513 HLLVYDYGGNCTLHDLLHSDEE---------------------------------------------------------- 534 (720)
Q Consensus 513 ~~lv~e~~~~gsL~~~l~~~~~---------------------------------------------------------- 534 (720)
.++||||+++|+|.++++....
T Consensus 116 ~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (401)
T cd05107 116 IYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDM 195 (401)
T ss_pred cEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhcc
Confidence 9999999999999999864311
Q ss_pred ------------------------------------hccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEE
Q 004994 535 ------------------------------------AHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILL 578 (720)
Q Consensus 535 ------------------------------------~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl 578 (720)
....+++.....++.+++.||.|||+. +|+||||||+|||+
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrdlkp~NiLl 272 (401)
T cd05107 196 KGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASK---NCVHRDLAARNVLI 272 (401)
T ss_pred hhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CcCcccCCcceEEE
Confidence 112467888899999999999999986 89999999999999
Q ss_pred cCCCCeEEccccCCCCCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccc
Q 004994 579 DEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQS 656 (720)
Q Consensus 579 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~ 656 (720)
++++.+||+|||+++...............++..|+|||.. ...++.++|||||||++|||++ |+.||........
T Consensus 273 ~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~-- 350 (401)
T cd05107 273 CEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQ-- 350 (401)
T ss_pred eCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHH--
Confidence 99999999999999865332211111223456789999988 5568999999999999999998 8999865322111
Q ss_pred hhhhcccccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhC
Q 004994 657 LVRWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCMI 720 (720)
Q Consensus 657 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~ 720 (720)
....+........+...+.++.+++.+||+.+|++||+++||++.|++++
T Consensus 351 --------------~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~ 400 (401)
T cd05107 351 --------------FYNAIKRGYRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL 400 (401)
T ss_pred --------------HHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 00000000000111123467889999999999999999999999999875
No 79
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=5.7e-38 Score=333.06 Aligned_cols=243 Identities=20% Similarity=0.286 Sum_probs=193.4
Q ss_pred CeeccCCCceEEEEEe-CCCcEEEEEEeccccc-ccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEeeCCCC
Q 004994 446 NFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVS-QRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDYGGNC 523 (720)
Q Consensus 446 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~g 523 (720)
+.||+|+||.||++.. .+|+.||+|++..... .......+.+|++++++++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 4699999999999965 5789999999975432 2234456788999999999999999999999999999999999999
Q ss_pred CHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCCCccc
Q 004994 524 TLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNEL 603 (720)
Q Consensus 524 sL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~~~ 603 (720)
+|.+++.. ...+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...... ..
T Consensus 81 ~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~--~~ 151 (323)
T cd05595 81 ELFFHLSR----ERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG--AT 151 (323)
T ss_pred cHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEEcCCCCEEecccHHhccccCCC--Cc
Confidence 99988753 34688999999999999999999987 99999999999999999999999999987542221 11
Q ss_pred ccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcCCCCCch
Q 004994 604 SEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDGA 682 (720)
Q Consensus 604 ~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 682 (720)
.....++..|+|||.. .+.++.++|||||||++|||++|+.||........... +..... .
T Consensus 152 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~----------------~~~~~~--~ 213 (323)
T cd05595 152 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFEL----------------ILMEEI--R 213 (323)
T ss_pred cccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHH----------------HhcCCC--C
Confidence 2235678899999998 55789999999999999999999999965432111100 000000 0
Q ss_pred hhHHHHHHHHHHHHHHhccCCCCCC-----CHHHHHHH
Q 004994 683 YLAKSLSRFADIISRCVQWEPGFRP-----PMSEIVQD 715 (720)
Q Consensus 683 ~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~evl~~ 715 (720)
.+...+.++.+++.+||+.||++|| ++.+++++
T Consensus 214 ~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h 251 (323)
T cd05595 214 FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 251 (323)
T ss_pred CCCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcC
Confidence 1112345788999999999999998 88888764
No 80
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=8.7e-38 Score=324.87 Aligned_cols=258 Identities=24% Similarity=0.392 Sum_probs=202.8
Q ss_pred cCCCCCCeeccCCCceEEEEEeC------CCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAELP------GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQH 513 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~ 513 (720)
++|...+.||+|+||.||+|... +++.||||.++.... ....+.|.+|++++++++|+||+++++++...+..
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 83 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETAS-NDARKDFEREAELLTNFQHENIVKFYGVCTEGDPP 83 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCC-HHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCe
Confidence 45777789999999999999653 347899999875432 22457899999999999999999999999999999
Q ss_pred EEEEeeCCCCCHHHHhhccc----------hhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCC
Q 004994 514 LLVYDYGGNCTLHDLLHSDE----------EAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLI 583 (720)
Q Consensus 514 ~lv~e~~~~gsL~~~l~~~~----------~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~ 583 (720)
++||||+++++|.+++.... .....+++.....++.+++.||+|||.. +++||||||+||+++.++.
T Consensus 84 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~ 160 (280)
T cd05049 84 IMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQ---HFVHRDLATRNCLVGYDLV 160 (280)
T ss_pred EEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeeccccccceEEEcCCCe
Confidence 99999999999999986432 1234578899999999999999999987 8999999999999999999
Q ss_pred eEEccccCCCCCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhc
Q 004994 584 VRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWA 661 (720)
Q Consensus 584 ~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~ 661 (720)
+||+|||+++................+..|+|||+. .+.++.++|||||||++|||++ |+.||........ ....
T Consensus 161 ~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~---~~~~ 237 (280)
T cd05049 161 VKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEV---IECI 237 (280)
T ss_pred EEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHH---HHHH
Confidence 999999999765333222222233446789999988 5678999999999999999999 9999865332211 1110
Q ss_pred ccccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q 004994 662 IPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLC 718 (720)
Q Consensus 662 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 718 (720)
..... ...+...+..+.+++.+||+.||++||+++||++.|++
T Consensus 238 -------------~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~~ 280 (280)
T cd05049 238 -------------TQGRL-LQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQK 280 (280)
T ss_pred -------------HcCCc-CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhhC
Confidence 00000 00111234678899999999999999999999999864
No 81
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-38 Score=332.23 Aligned_cols=257 Identities=24% Similarity=0.402 Sum_probs=214.0
Q ss_pred HhcCCCCCCeeccCCCceEEEEEeCC-CcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEE
Q 004994 438 YTNSFSEGNFIGEGLLGSVYKAELPG-GKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLV 516 (720)
Q Consensus 438 ~~~~~~~~~~lg~G~~g~Vy~~~~~~-g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 516 (720)
-..+....++||-|.||.||.|.|+. ...||||.++.+ ....++|+.|..+|+.++|||+|+++|+|..+..+|||
T Consensus 265 eRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKED---tMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIi 341 (1157)
T KOG4278|consen 265 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED---TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYII 341 (1157)
T ss_pred cchheeeeeccCCCcccceeeeeeeccceeeehhhhhhc---chhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEE
Confidence 33455566899999999999997754 678999999754 46678999999999999999999999999999999999
Q ss_pred EeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCC
Q 004994 517 YDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLF 596 (720)
Q Consensus 517 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~ 596 (720)
+|||..|+|.++|++.. +..++-...+.+|.||+.|++||... ++|||||.++|+|+.++..|||+|||+++++.
T Consensus 342 TEfM~yGNLLdYLRecn--r~ev~avvLlyMAtQIsSaMeYLEkk---nFIHRDLAARNCLVgEnhiVKvADFGLsRlMt 416 (1157)
T KOG4278|consen 342 TEFMCYGNLLDYLRECN--RSEVPAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHIVKVADFGLSRLMT 416 (1157)
T ss_pred EecccCccHHHHHHHhc--hhhcchhHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhccccccceEEeeccchhhhhc
Confidence 99999999999998654 45567777889999999999999987 89999999999999999999999999999986
Q ss_pred CCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcccccCchhhhhhh
Q 004994 597 SGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRM 674 (720)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (720)
.+.+. -..+..-...|.|||-+ -..++.|+|||+|||+|||+.| |-.||.+.+-. .+-.+
T Consensus 417 gDTYT-AHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlS-----------------qVY~L 478 (1157)
T KOG4278|consen 417 GDTYT-AHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS-----------------QVYGL 478 (1157)
T ss_pred CCcee-cccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHH-----------------HHHHH
Confidence 54332 22222234568899988 5679999999999999999998 88999754321 22233
Q ss_pred cCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhC
Q 004994 675 VDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCMI 720 (720)
Q Consensus 675 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~ 720 (720)
++.......++.|++.+.+||..||++.|++||++.|+-+.+|.|+
T Consensus 479 LEkgyRM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf 524 (1157)
T KOG4278|consen 479 LEKGYRMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMF 524 (1157)
T ss_pred HhccccccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHh
Confidence 3444444556678889999999999999999999999999999884
No 82
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=5.9e-38 Score=349.78 Aligned_cols=252 Identities=18% Similarity=0.269 Sum_probs=199.3
Q ss_pred CCCCCeeccCCCceEEEEEe-CC-CcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEee
Q 004994 442 FSEGNFIGEGLLGSVYKAEL-PG-GKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDY 519 (720)
Q Consensus 442 ~~~~~~lg~G~~g~Vy~~~~-~~-g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 519 (720)
|...+.||+|+||.||+|.. .+ +..||+|.+... .......+.+|+++++.++|||||++++++...+..++||||
T Consensus 69 y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~--~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~ 146 (478)
T PTZ00267 69 YVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLN--DERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEY 146 (478)
T ss_pred EEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccC--CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEEC
Confidence 67778999999999999954 34 678888876432 233445678899999999999999999999999999999999
Q ss_pred CCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCC
Q 004994 520 GGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGS 599 (720)
Q Consensus 520 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~ 599 (720)
+++|+|.+++.........+++.....++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++.+....
T Consensus 147 ~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~ 223 (478)
T PTZ00267 147 GSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSR---KMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSV 223 (478)
T ss_pred CCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCcCHHhEEECCCCcEEEEeCcCceecCCcc
Confidence 999999998865433345688889999999999999999987 99999999999999999999999999998764332
Q ss_pred CcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcCCC
Q 004994 600 TNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPS 678 (720)
Q Consensus 600 ~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (720)
.........|+++|+|||+. ...++.++|||||||++|||+||+.||....... +. ..+....
T Consensus 224 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~---~~-------------~~~~~~~ 287 (478)
T PTZ00267 224 SLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQRE---IM-------------QQVLYGK 287 (478)
T ss_pred ccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHH---HH-------------HHHHhCC
Confidence 22233345689999999998 5568999999999999999999999996532211 01 1111000
Q ss_pred CCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 679 LDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 679 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.. ..+...+.++.+++.+||+.||++||++++++++
T Consensus 288 ~~-~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~ 323 (478)
T PTZ00267 288 YD-PFPCPVSSGMKALLDPLLSKNPALRPTTQQLLHT 323 (478)
T ss_pred CC-CCCccCCHHHHHHHHHHhccChhhCcCHHHHHhC
Confidence 00 0111233578899999999999999999999754
No 83
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=4.1e-38 Score=314.56 Aligned_cols=269 Identities=22% Similarity=0.291 Sum_probs=200.1
Q ss_pred CCCCCCeeccCCCceEEEEE-eCCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCc-eeEEEeEeccCC------e
Q 004994 441 SFSEGNFIGEGLLGSVYKAE-LPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGN-IVELIGYCNEHG------Q 512 (720)
Q Consensus 441 ~~~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~n-iv~l~~~~~~~~------~ 512 (720)
.|...+.||+|+||+||+|+ ..+|+.||+|+++.....+.......+|+.++++++|+| ||.+++++.... .
T Consensus 12 ~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~ 91 (323)
T KOG0594|consen 12 DYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGK 91 (323)
T ss_pred HHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccce
Confidence 34455779999999999995 567999999999865544445566789999999999999 999999998766 7
Q ss_pred EEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCC
Q 004994 513 HLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLA 592 (720)
Q Consensus 513 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla 592 (720)
.++||||++. +|..++.........++...+..++.|+.+||+|||+. +|+||||||.|||++++|.+||+|||+|
T Consensus 92 l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~---~IlHRDLKPQNlLi~~~G~lKlaDFGlA 167 (323)
T KOG0594|consen 92 LYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSH---GILHRDLKPQNLLISSSGVLKLADFGLA 167 (323)
T ss_pred EEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCcceEEECCCCcEeeeccchH
Confidence 8999999886 89998865432213566678999999999999999997 9999999999999999999999999999
Q ss_pred CCCCCCCCcccccCccccccCCCCccCC--CCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhh--hcccccCch
Q 004994 593 PLLFSGSTNELSEGLLTAHGSGAPEFES--GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVR--WAIPRLHDI 668 (720)
Q Consensus 593 ~~~~~~~~~~~~~~~~~~~~~~aPE~~~--~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~--~~~~~~~~~ 668 (720)
+...-... .......|.+|+|||.+- ..|+...||||+|||++||++++.-|.+..+.+....+- ...+.-..+
T Consensus 168 ra~~ip~~--~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~W 245 (323)
T KOG0594|consen 168 RAFSIPMR--TYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDW 245 (323)
T ss_pred HHhcCCcc--cccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCC
Confidence 86642221 123345788999999983 369999999999999999999998887654322111110 011111112
Q ss_pred hhhhhhcCCCCC-------chhhHHH---HHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 669 DALSRMVDPSLD-------GAYLAKS---LSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 669 ~~~~~~~~~~~~-------~~~~~~~---~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.......+.... ....... .....+++.+||+.+|.+|.|++.+++|
T Consensus 246 p~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h 302 (323)
T KOG0594|consen 246 PGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH 302 (323)
T ss_pred CCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence 111111111100 0000111 1367899999999999999999999976
No 84
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=1.3e-37 Score=325.06 Aligned_cols=258 Identities=24% Similarity=0.397 Sum_probs=202.1
Q ss_pred cCCCCCCeeccCCCceEEEEEe------CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL------PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQH 513 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~------~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~ 513 (720)
++|...+.||+|+||+||++.. .++..+|+|.+.... ....+.+.+|++++++++||||+++++++...+..
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 82 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS--DNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPL 82 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcC--HHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCcc
Confidence 5678889999999999999964 234678999986432 33456789999999999999999999999999999
Q ss_pred EEEEeeCCCCCHHHHhhccc---------hhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCe
Q 004994 514 LLVYDYGGNCTLHDLLHSDE---------EAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIV 584 (720)
Q Consensus 514 ~lv~e~~~~gsL~~~l~~~~---------~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~ 584 (720)
++||||+++++|.+++.... .....+++..+..++.+++.||+|||+. +++||||||+||++++++.+
T Consensus 83 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~---~i~H~dlkp~Nili~~~~~~ 159 (288)
T cd05093 83 IMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLV 159 (288)
T ss_pred EEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccCCcE
Confidence 99999999999999986432 1123589999999999999999999987 89999999999999999999
Q ss_pred EEccccCCCCCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcc
Q 004994 585 RVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAI 662 (720)
Q Consensus 585 kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~ 662 (720)
||+|||+++...............++..|+|||.. ...++.++|||||||++|||+| |+.||....... ....
T Consensus 160 kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~---~~~~-- 234 (288)
T cd05093 160 KIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE---VIEC-- 234 (288)
T ss_pred EeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH---HHHH--
Confidence 99999999866433222222223346789999988 4568999999999999999998 999986543211 1110
Q ss_pred cccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 663 PRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
+...... ..+...+.++.+++.+||+.||.+|||++|+++.|+++
T Consensus 235 -----------i~~~~~~-~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~ 279 (288)
T cd05093 235 -----------ITQGRVL-QRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNL 279 (288)
T ss_pred -----------HHcCCcC-CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHH
Confidence 0000000 00111235689999999999999999999999999876
No 85
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1.5e-37 Score=323.75 Aligned_cols=258 Identities=26% Similarity=0.392 Sum_probs=200.9
Q ss_pred cCCCCCCeeccCCCceEEEEEe-----CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL-----PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHL 514 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~-----~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~ 514 (720)
.+|+..+.||+|+||+||+|.. .++..||+|.+..... ......+.+|++++++++||||+++++++...+..+
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 83 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINN-PQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVC 83 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCC-HHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceE
Confidence 3566778999999999999963 3567899999975322 334467889999999999999999999999999999
Q ss_pred EEEeeCCCCCHHHHhhccc-------------hhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCC
Q 004994 515 LVYDYGGNCTLHDLLHSDE-------------EAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEK 581 (720)
Q Consensus 515 lv~e~~~~gsL~~~l~~~~-------------~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~ 581 (720)
+||||+++++|.+++.... .....+++.....++.+++.||+|||+. +|+||||||+|||++++
T Consensus 84 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~nili~~~ 160 (283)
T cd05090 84 MLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSH---FFVHKDLAARNILIGEQ 160 (283)
T ss_pred EEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhc---CeehhccccceEEEcCC
Confidence 9999999999999985321 1123578889999999999999999987 89999999999999999
Q ss_pred CCeEEccccCCCCCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhh
Q 004994 582 LIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVR 659 (720)
Q Consensus 582 ~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~ 659 (720)
+.+||+|||+++...............++..|+|||+. .+.++.++|||||||++|||++ |..||....... +..
T Consensus 161 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~---~~~ 237 (283)
T cd05090 161 LHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQE---VIE 237 (283)
T ss_pred CcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHH---HHH
Confidence 99999999999876433222222333446679999988 5678999999999999999998 999986432211 111
Q ss_pred hcccccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q 004994 660 WAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLC 718 (720)
Q Consensus 660 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 718 (720)
.. ........+...+.++.+++.+||+.||++||++.+|+++|..
T Consensus 238 ~~--------------~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 238 MV--------------RKRQLLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred HH--------------HcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 10 0000000112234678899999999999999999999999864
No 86
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-38 Score=346.83 Aligned_cols=254 Identities=20% Similarity=0.320 Sum_probs=201.1
Q ss_pred CCCCCCeeccCCCceEEEEEeCCC-cEEEEEEecccccccccHHHHHHHHHHHHccC-CCceeEEEe-Eec----c--CC
Q 004994 441 SFSEGNFIGEGLLGSVYKAELPGG-KLLAVKKLSNTVSQRQTDEEFLELASTISRLR-HGNIVELIG-YCN----E--HG 511 (720)
Q Consensus 441 ~~~~~~~lg~G~~g~Vy~~~~~~g-~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~~-~~~----~--~~ 511 (720)
++++.++|.+|||+.||.|....+ ..||+|++.-. ++...+...+|+++|++|. |+|||.+++ ... . ..
T Consensus 38 ~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~--de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~ 115 (738)
T KOG1989|consen 38 RVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVN--DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVW 115 (738)
T ss_pred EEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecC--CHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCcee
Confidence 455678999999999999976554 99999998643 4566678899999999996 999999999 331 1 24
Q ss_pred eEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccC
Q 004994 512 QHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGL 591 (720)
Q Consensus 512 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGl 591 (720)
+++|+||||.+|+|-|++..+.. ..|++.++++|+.++++|+++||.. .++|||||||-+||||+.+++.||||||.
T Consensus 116 EvllLmEyC~gg~Lvd~mn~Rlq--~~lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~KLCDFGS 192 (738)
T KOG1989|consen 116 EVLLLMEYCKGGSLVDFMNTRLQ--TRLTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYKLCDFGS 192 (738)
T ss_pred EEEeehhhccCCcHHHHHHHHHh--ccCChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEEeCcccc
Confidence 78999999999999999975433 3499999999999999999999986 77899999999999999999999999999
Q ss_pred CCCCCCCC-C-cc---ccc--CccccccCCCCccC---C-CCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhh
Q 004994 592 APLLFSGS-T-NE---LSE--GLLTAHGSGAPEFE---S-GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRW 660 (720)
Q Consensus 592 a~~~~~~~-~-~~---~~~--~~~~~~~~~aPE~~---~-~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~ 660 (720)
|.-..... . .. ... ...+|+.|++||++ . ...++|+|||++||+||-|+....||+....-. +.
T Consensus 193 att~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~la---Il-- 267 (738)
T KOG1989|consen 193 ATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKLA---IL-- 267 (738)
T ss_pred cccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCccee---EE--
Confidence 86432221 1 11 111 23478999999987 3 368999999999999999999999997642211 11
Q ss_pred cccccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 661 AIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
+.....--.......|.+||..||+.||++||++-+|+.++.+|
T Consensus 268 ---------------ng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l 311 (738)
T KOG1989|consen 268 ---------------NGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFEL 311 (738)
T ss_pred ---------------eccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHH
Confidence 11111000123457899999999999999999999999999876
No 87
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=6.8e-38 Score=330.98 Aligned_cols=241 Identities=20% Similarity=0.265 Sum_probs=191.1
Q ss_pred eccCCCceEEEEEe-CCCcEEEEEEecccc-cccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEeeCCCCCH
Q 004994 448 IGEGLLGSVYKAEL-PGGKLLAVKKLSNTV-SQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDYGGNCTL 525 (720)
Q Consensus 448 lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~-~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL 525 (720)
||+|+||+||+|.. .+++.||+|++.+.. ........+.+|++++++++||||+++++++.+.+..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 69999999999965 468899999986432 2233456788999999999999999999999999999999999999999
Q ss_pred HHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCCCccccc
Q 004994 526 HDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSE 605 (720)
Q Consensus 526 ~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~~~~~ 605 (720)
.+++.. ...+++..+..++.++++||.|||+. +|+||||||+|||++.++.+||+|||+++...... ....
T Consensus 81 ~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~--~~~~ 151 (312)
T cd05585 81 FHHLQR----EGRFDLSRARFYTAELLCALENLHKF---NVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDD--DKTN 151 (312)
T ss_pred HHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHeEECCCCcEEEEECcccccCccCC--Cccc
Confidence 998853 34588899999999999999999987 89999999999999999999999999997643221 1223
Q ss_pred CccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcCCCCCchhh
Q 004994 606 GLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDGAYL 684 (720)
Q Consensus 606 ~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 684 (720)
...++..|+|||.. ...++.++|||||||++|||+||+.||........ ...+..... ..+
T Consensus 152 ~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~----------------~~~~~~~~~--~~~ 213 (312)
T cd05585 152 TFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEM----------------YRKILQEPL--RFP 213 (312)
T ss_pred cccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHH----------------HHHHHcCCC--CCC
Confidence 45688999999998 45689999999999999999999999965321110 011111000 011
Q ss_pred HHHHHHHHHHHHHHhccCCCCCCC---HHHHHHH
Q 004994 685 AKSLSRFADIISRCVQWEPGFRPP---MSEIVQD 715 (720)
Q Consensus 685 ~~~~~~l~~l~~~cl~~dP~~RPt---~~evl~~ 715 (720)
.....++.+++.+||+.||++||+ +.|++++
T Consensus 214 ~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~h 247 (312)
T cd05585 214 DGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNH 247 (312)
T ss_pred CcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcC
Confidence 223457889999999999999975 6777654
No 88
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=2.1e-37 Score=324.07 Aligned_cols=258 Identities=23% Similarity=0.384 Sum_probs=202.6
Q ss_pred cCCCCCCeeccCCCceEEEEEeC------CCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAELP------GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQH 513 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~ 513 (720)
.+|...+.||+|+||.||+|... ++..+++|.+.... ....+.+.+|++++++++|+||+++++++...+..
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 82 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPT--LAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPL 82 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCcc--HHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCce
Confidence 35677789999999999999642 35679999986432 23346788999999999999999999999999999
Q ss_pred EEEEeeCCCCCHHHHhhccc------------hhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCC
Q 004994 514 LLVYDYGGNCTLHDLLHSDE------------EAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEK 581 (720)
Q Consensus 514 ~lv~e~~~~gsL~~~l~~~~------------~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~ 581 (720)
++||||+++++|.+++.... .....+++..+..++.+++.||+|||+. +|+||||||+||+++++
T Consensus 83 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Nil~~~~ 159 (291)
T cd05094 83 IMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ---HFVHRDLATRNCLVGAN 159 (291)
T ss_pred EEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccC
Confidence 99999999999999986432 1124588999999999999999999987 89999999999999999
Q ss_pred CCeEEccccCCCCCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhh
Q 004994 582 LIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVR 659 (720)
Q Consensus 582 ~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~ 659 (720)
+.+||+|||+++...............++..|+|||.. ...++.++|||||||++|||+| |+.||........ .+
T Consensus 160 ~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~---~~ 236 (291)
T cd05094 160 LLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEV---IE 236 (291)
T ss_pred CcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH---HH
Confidence 99999999999866443322222334456789999987 5568999999999999999999 9999865432111 11
Q ss_pred hcccccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 660 WAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 660 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
. +...... ......+..+.+++.+||+.||++|||+++|++.|+++
T Consensus 237 ~-------------~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~ 282 (291)
T cd05094 237 C-------------ITQGRVL-ERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHAL 282 (291)
T ss_pred H-------------HhCCCCC-CCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHH
Confidence 0 0000000 01112345788999999999999999999999999875
No 89
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=4.5e-38 Score=335.60 Aligned_cols=246 Identities=18% Similarity=0.263 Sum_probs=197.0
Q ss_pred cCCCCCCeeccCCCceEEEEEeC-C-CcEEEEEEecccc-cccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAELP-G-GKLLAVKKLSNTV-SQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLV 516 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~~-~-g~~vavK~l~~~~-~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 516 (720)
++|...+.||+|+||.||+|... + +..||+|++.+.. ......+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 30 ~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 109 (340)
T PTZ00426 30 EDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYLV 109 (340)
T ss_pred hhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEEE
Confidence 46888899999999999999653 3 4689999986432 1233456788999999999999999999999999999999
Q ss_pred EeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCC
Q 004994 517 YDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLF 596 (720)
Q Consensus 517 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~ 596 (720)
|||+++|+|.+++.. ...+++.....++.+++.||.|||+. +|+||||||+|||++.++++||+|||+++.+.
T Consensus 110 ~Ey~~~g~L~~~i~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~ 182 (340)
T PTZ00426 110 LEFVIGGEFFTFLRR----NKRFPNDVGCFYAAQIVLIFEYLQSL---NIVYRDLKPENLLLDKDGFIKMTDFGFAKVVD 182 (340)
T ss_pred EeCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEecCCCCeecC
Confidence 999999999999853 34688889999999999999999987 99999999999999999999999999998653
Q ss_pred CCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhc
Q 004994 597 SGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMV 675 (720)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (720)
.. .....+++.|+|||.+ ...++.++|||||||++|||+||+.||.......... .+.
T Consensus 183 ~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~----------------~i~ 241 (340)
T PTZ00426 183 TR-----TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQ----------------KIL 241 (340)
T ss_pred CC-----cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHH----------------HHh
Confidence 22 1235678899999998 4568999999999999999999999997543211110 011
Q ss_pred CCCCCchhhHHHHHHHHHHHHHHhccCCCCCC-----CHHHHHHH
Q 004994 676 DPSLDGAYLAKSLSRFADIISRCVQWEPGFRP-----PMSEIVQD 715 (720)
Q Consensus 676 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~evl~~ 715 (720)
.... .++......+.+++.+|++.||++|+ +++|++++
T Consensus 242 ~~~~--~~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h 284 (340)
T PTZ00426 242 EGII--YFPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEH 284 (340)
T ss_pred cCCC--CCCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence 1000 01111234678999999999999995 89998875
No 90
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=1.8e-37 Score=322.11 Aligned_cols=259 Identities=23% Similarity=0.337 Sum_probs=200.4
Q ss_pred hcCCCCCCeeccCCCceEEEEEeC------CCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCe
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAELP------GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQ 512 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~ 512 (720)
+++|...+.||+|++|.||+|... .+..||+|.+.... .......|..|+.++++++|+||+++++++.+.+.
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 83 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESC-SEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLP 83 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCC-CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCC
Confidence 456888899999999999999654 35789999886432 23334678999999999999999999999999889
Q ss_pred EEEEEeeCCCCCHHHHhhccch---hccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCC---CeEE
Q 004994 513 HLLVYDYGGNCTLHDLLHSDEE---AHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKL---IVRV 586 (720)
Q Consensus 513 ~~lv~e~~~~gsL~~~l~~~~~---~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~---~~kl 586 (720)
.++||||+++++|.+++..... ....++|..+.+++.+++.||+|||+. +++||||||+||+++.++ .+||
T Consensus 84 ~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~nil~~~~~~~~~~kl 160 (277)
T cd05036 84 RFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEEN---HFIHRDIAARNCLLTCKGPGRVAKI 160 (277)
T ss_pred cEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchheEEEeccCCCcceEe
Confidence 9999999999999999864321 123589999999999999999999987 899999999999998754 5999
Q ss_pred ccccCCCCCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcccc
Q 004994 587 SDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPR 664 (720)
Q Consensus 587 ~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~ 664 (720)
+|||+++.+..............+..|+|||+. .+.++.++|||||||++|||++ |+.||......... .
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~---~----- 232 (277)
T cd05036 161 ADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVM---E----- 232 (277)
T ss_pred ccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHH---H-----
Confidence 999999876332221111122234579999997 5679999999999999999997 99999754322111 1
Q ss_pred cCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q 004994 665 LHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLC 718 (720)
Q Consensus 665 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 718 (720)
.+........+...+..+.+++.+|++.+|++||++.+|+++|++
T Consensus 233 ---------~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~~ 277 (277)
T cd05036 233 ---------FVTGGGRLDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQY 277 (277)
T ss_pred ---------HHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhhC
Confidence 000000011112234578899999999999999999999999874
No 91
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=2.1e-37 Score=325.60 Aligned_cols=259 Identities=25% Similarity=0.379 Sum_probs=203.0
Q ss_pred cCCCCCCeeccCCCceEEEEEe------CCCcEEEEEEecccccccccHHHHHHHHHHHHcc-CCCceeEEEeEeccCCe
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL------PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRL-RHGNIVELIGYCNEHGQ 512 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~------~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~ 512 (720)
++|...+.||+|+||.||++.. .++..||||.++.... ....+.+.+|+++++++ +|+||+++++++...+.
T Consensus 35 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 113 (302)
T cd05055 35 NNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAH-SSEREALMSELKIMSHLGNHENIVNLLGACTIGGP 113 (302)
T ss_pred HHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCC-hHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCc
Confidence 4688889999999999999953 2355899999875422 23446789999999999 79999999999999999
Q ss_pred EEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCC
Q 004994 513 HLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLA 592 (720)
Q Consensus 513 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla 592 (720)
.++||||+.+|+|.++++... ...+++.++..++.+++.||+|||+. +|+|+||||+|||++.++.+|++|||++
T Consensus 114 ~~lv~e~~~~~~L~~~i~~~~--~~~l~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~dfg~~ 188 (302)
T cd05055 114 ILVITEYCCYGDLLNFLRRKR--ESFLTLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNVLLTHGKIVKICDFGLA 188 (302)
T ss_pred eEEEEEcCCCCcHHHHHHhCC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeehhhhccceEEEcCCCeEEECCCccc
Confidence 999999999999999986422 23489999999999999999999987 8999999999999999999999999999
Q ss_pred CCCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcccccCchhh
Q 004994 593 PLLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDA 670 (720)
Q Consensus 593 ~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~ 670 (720)
+...............++..|+|||.. .+.++.++|||||||++|||+| |+.||........ +..
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~--~~~----------- 255 (302)
T cd05055 189 RDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSK--FYK----------- 255 (302)
T ss_pred ccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHH--HHH-----------
Confidence 866433221122223456789999987 5678999999999999999998 9999865332111 000
Q ss_pred hhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhC
Q 004994 671 LSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCMI 720 (720)
Q Consensus 671 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~ 720 (720)
.+........+...+.++.+++.+||+.+|++|||+.|+++.|++++
T Consensus 256 ---~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~~ 302 (302)
T cd05055 256 ---LIKEGYRMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQL 302 (302)
T ss_pred ---HHHcCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhhC
Confidence 11100000011122357889999999999999999999999999875
No 92
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=1.5e-37 Score=323.17 Aligned_cols=249 Identities=23% Similarity=0.297 Sum_probs=195.5
Q ss_pred eccCCCceEEEEEe-CCCcEEEEEEeccccc-ccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEeeCCCCCH
Q 004994 448 IGEGLLGSVYKAEL-PGGKLLAVKKLSNTVS-QRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDYGGNCTL 525 (720)
Q Consensus 448 lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL 525 (720)
||+|+||+||++.. .+|+.||+|.+.+... .....+.+..|++++++++|+||+++.+++......++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 69999999999965 5789999999865322 122335678899999999999999999999999999999999999999
Q ss_pred HHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCCCccccc
Q 004994 526 HDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSE 605 (720)
Q Consensus 526 ~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~~~~~ 605 (720)
.+.+.........+++..+..++.|++.||.|||+. +|+||||||+||++++++.+||+|||++..+..... ...
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~--~~~ 155 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQR---RIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQS--KTK 155 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCccceecCCCCc--ccc
Confidence 988754333445789999999999999999999987 999999999999999999999999999976643322 223
Q ss_pred CccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcCCCCCchhh
Q 004994 606 GLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDGAYL 684 (720)
Q Consensus 606 ~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 684 (720)
...++..|+|||.. .+.++.++|||||||++|||++|+.||.......... .....+..... .++
T Consensus 156 ~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~------------~~~~~~~~~~~--~~~ 221 (280)
T cd05608 156 GYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENK------------ELKQRILNDSV--TYP 221 (280)
T ss_pred ccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHH------------HHHHhhcccCC--CCc
Confidence 35678899999998 5678999999999999999999999996533211100 00111111110 112
Q ss_pred HHHHHHHHHHHHHHhccCCCCCC-----CHHHHHHH
Q 004994 685 AKSLSRFADIISRCVQWEPGFRP-----PMSEIVQD 715 (720)
Q Consensus 685 ~~~~~~l~~l~~~cl~~dP~~RP-----t~~evl~~ 715 (720)
...+.++.+++.+||+.||++|| ++++++++
T Consensus 222 ~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h 257 (280)
T cd05608 222 DKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTH 257 (280)
T ss_pred ccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcC
Confidence 23446788999999999999999 77888865
No 93
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=5.6e-37 Score=316.27 Aligned_cols=261 Identities=21% Similarity=0.329 Sum_probs=206.1
Q ss_pred cCCCCCCeeccCCCceEEEEEeC-CCcEEEEEEeccc-ccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNT-VSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVY 517 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~-~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 517 (720)
++|+..+.||+|+||.||+|... +|+.||+|.++.. .......+.+.+|++++++++|+||+++++++.+.+..++||
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 57888899999999999999665 7999999998642 222334568899999999999999999999999999999999
Q ss_pred eeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCC
Q 004994 518 DYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFS 597 (720)
Q Consensus 518 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~ 597 (720)
||+++++|.+++.........+++..+..++.++++||.|||+. +|+||||||+||+++.++.++|+|||+++.+..
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~ 158 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSK---RIMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecCCcChhhEEECCCCcEEEeccceeeeccC
Confidence 99999999998865433345688999999999999999999987 999999999999999999999999999876533
Q ss_pred CCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcC
Q 004994 598 GSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVD 676 (720)
Q Consensus 598 ~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (720)
... ......++..|.|||.. ...++.++|||||||++|||++|+.||...... ...... ....
T Consensus 159 ~~~--~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-~~~~~~-------------~~~~ 222 (267)
T cd08224 159 KTT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN-LYSLCK-------------KIEK 222 (267)
T ss_pred CCc--ccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCcc-HHHHHh-------------hhhc
Confidence 211 11224567789999987 456899999999999999999999999643211 000000 0000
Q ss_pred CCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 677 PSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 677 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
...........+..+.+++.+||..+|++|||+.+|++.|++|
T Consensus 223 ~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~ 265 (267)
T cd08224 223 CDYPPLPADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEM 265 (267)
T ss_pred CCCCCCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHh
Confidence 0000000113345788999999999999999999999999876
No 94
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=2.3e-37 Score=317.44 Aligned_cols=250 Identities=25% Similarity=0.393 Sum_probs=198.3
Q ss_pred CCCCCCeeccCCCceEEEEEeCCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEeeC
Q 004994 441 SFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDYG 520 (720)
Q Consensus 441 ~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 520 (720)
+|+..+.||+|+||.||+|...++..+|+|.+.+.. .....|.+|++++++++|+||+++++++.+.+..++||||+
T Consensus 5 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (256)
T cd05059 5 ELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGA---MSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYM 81 (256)
T ss_pred HcchhhhhccCCCceEEEeEecCCccEEEEEeccCC---CCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecC
Confidence 467788999999999999988777889999986432 23457889999999999999999999999999999999999
Q ss_pred CCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCCC
Q 004994 521 GNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGST 600 (720)
Q Consensus 521 ~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~~ 600 (720)
++++|.+++... ...+++.....++.++++||+|||+. +++||||||+||++++++.+||+|||+++.......
T Consensus 82 ~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~ 155 (256)
T cd05059 82 ANGCLLNYLRER---KGKLGTEWLLDMCSDVCEAMEYLESN---GFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQY 155 (256)
T ss_pred CCCCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHhhEEECCCCcEEECCcccceecccccc
Confidence 999999998643 23688999999999999999999987 899999999999999999999999999986643211
Q ss_pred cccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcccccCchhhhhhhcCCC
Q 004994 601 NELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPS 678 (720)
Q Consensus 601 ~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (720)
. .......+..|+|||.. ...++.++|||||||++|||+| |+.||........ ... ........
T Consensus 156 ~-~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~---~~~----------~~~~~~~~ 221 (256)
T cd05059 156 T-SSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEV---VES----------VSAGYRLY 221 (256)
T ss_pred c-ccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHH---HHH----------HHcCCcCC
Confidence 1 11112234579999988 5678999999999999999999 8999965332111 100 00000001
Q ss_pred CCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 004994 679 LDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLL 717 (720)
Q Consensus 679 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 717 (720)
.+...+.++.+++.+||+.+|++|||+.|+++.|.
T Consensus 222 ----~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l~ 256 (256)
T cd05059 222 ----RPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQLT 256 (256)
T ss_pred ----CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHhC
Confidence 11123467889999999999999999999999873
No 95
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=2.1e-37 Score=317.65 Aligned_cols=250 Identities=23% Similarity=0.369 Sum_probs=198.7
Q ss_pred CCCCCCeeccCCCceEEEEEeCCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEeeC
Q 004994 441 SFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDYG 520 (720)
Q Consensus 441 ~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 520 (720)
+|...+.||+|+||+||+|+..++..||+|.+.... ...++|.+|+.++++++||||+++++++.+.+..++||||+
T Consensus 5 ~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 81 (256)
T cd05113 5 DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS---MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYM 81 (256)
T ss_pred HeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCc---ccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcC
Confidence 566778999999999999988777789999986432 23467899999999999999999999999988999999999
Q ss_pred CCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCCC
Q 004994 521 GNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGST 600 (720)
Q Consensus 521 ~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~~ 600 (720)
.+|+|.+++... ...+++..+..++.+++.||+|||+. +++|+||||+||++++++.+||+|||.++.......
T Consensus 82 ~~~~l~~~i~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~ 155 (256)
T cd05113 82 SNGCLLNYLREH---GKRFQPSQLLEMCKDVCEGMAYLESK---QFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEY 155 (256)
T ss_pred CCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCCEEECCCccceecCCCce
Confidence 999999988642 23689999999999999999999987 999999999999999999999999999886643221
Q ss_pred cccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcccccCchhhhhhhcCCC
Q 004994 601 NELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPS 678 (720)
Q Consensus 601 ~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (720)
. ......++..|++||.. .+.++.++|||||||++|||+| |+.||........ ... +....
T Consensus 156 ~-~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~---~~~-------------~~~~~ 218 (256)
T cd05113 156 T-SSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSET---VEK-------------VSQGL 218 (256)
T ss_pred e-ecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHH---HHH-------------HhcCC
Confidence 1 11223345679999998 4578999999999999999999 9999965332111 000 00000
Q ss_pred CCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 004994 679 LDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLL 717 (720)
Q Consensus 679 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 717 (720)
....+...+..+.+++.+||+.+|++|||+.++++.|+
T Consensus 219 -~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 219 -RLYRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred -CCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 00001112357889999999999999999999998874
No 96
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=2.6e-37 Score=321.44 Aligned_cols=260 Identities=23% Similarity=0.332 Sum_probs=205.0
Q ss_pred hcCCCCCCeeccCCCceEEEEEeCC-----CcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEecc-CCe
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAELPG-----GKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNE-HGQ 512 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~~~-----g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~-~~~ 512 (720)
.++|...++||+|+||.||+|.... +..|++|++.... .....+.+.+|+.++++++|+||+++++++.+ ...
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~-~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~ 83 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHA-SEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEP 83 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCC-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence 4577888999999999999997654 6889999987442 23445778899999999999999999998765 567
Q ss_pred EEEEEeeCCCCCHHHHhhccchh----ccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEcc
Q 004994 513 HLLVYDYGGNCTLHDLLHSDEEA----HKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSD 588 (720)
Q Consensus 513 ~~lv~e~~~~gsL~~~l~~~~~~----~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~D 588 (720)
.++++||+++++|.+++...... ...+++..+..++.+++.||+|||+. +++||||||+||++++++.+||+|
T Consensus 84 ~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kl~d 160 (280)
T cd05043 84 PFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKR---GVIHKDIAARNCVIDEELQVKITD 160 (280)
T ss_pred CEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCHhhEEEcCCCcEEECC
Confidence 89999999999999998653221 15689999999999999999999987 899999999999999999999999
Q ss_pred ccCCCCCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcccccC
Q 004994 589 CGLAPLLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLH 666 (720)
Q Consensus 589 FGla~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~ 666 (720)
||+++.+.............++..|+|||.. ...++.++|||||||++||+++ |+.||....+.. +..+....
T Consensus 161 ~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~---~~~~~~~~-- 235 (280)
T cd05043 161 NALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFE---MAAYLKDG-- 235 (280)
T ss_pred CCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHH---HHHHHHcC--
Confidence 9999876544332222233456779999988 4568999999999999999999 999997543221 11111000
Q ss_pred chhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 667 DIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
... .....+++++.+++.+||+.||++|||+.|+++.|+++
T Consensus 236 --------~~~----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~ 276 (280)
T cd05043 236 --------YRL----AQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDF 276 (280)
T ss_pred --------CCC----CCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence 000 01112345788999999999999999999999999886
No 97
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=2.3e-37 Score=319.32 Aligned_cols=261 Identities=18% Similarity=0.300 Sum_probs=206.3
Q ss_pred cCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccc-cccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTV-SQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVY 517 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~-~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 517 (720)
++|+..+.||+|+||.||+|.. .+++.||||.+.... .......++.+|+++++.++|+||+++++++.+.+..+++|
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 3577788999999999999964 578999999886432 22334467889999999999999999999999999999999
Q ss_pred eeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCC
Q 004994 518 DYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFS 597 (720)
Q Consensus 518 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~ 597 (720)
||+++++|.+++.........+++.....++.++++||.|||+. +++|+||||+||+++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEECcchhhhcccc
Confidence 99999999998864333345689999999999999999999987 999999999999999999999999999876643
Q ss_pred CCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcC
Q 004994 598 GSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVD 676 (720)
Q Consensus 598 ~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (720)
... ......++..|+|||.. ...++.++||||||+++|||++|+.||....... ..... .......
T Consensus 159 ~~~--~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-~~~~~----------~~~~~~~ 225 (267)
T cd08229 159 KTT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNL-YSLCK----------KIEQCDY 225 (267)
T ss_pred CCc--ccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchH-HHHhh----------hhhcCCC
Confidence 221 12234577889999988 5568899999999999999999999996432110 00000 0111111
Q ss_pred CCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 677 PSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 677 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
+... ....+.++.+++.+||+.||++||||.+|++.+++|
T Consensus 226 ~~~~---~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~ 265 (267)
T cd08229 226 PPLP---SDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRM 265 (267)
T ss_pred CCCC---cccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhh
Confidence 1111 122446788999999999999999999999999887
No 98
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.1e-37 Score=326.63 Aligned_cols=260 Identities=23% Similarity=0.381 Sum_probs=200.8
Q ss_pred cCCCCCCeeccCCCceEEEEEeC--------CCcEEEEEEecccccccccHHHHHHHHHHHHcc-CCCceeEEEeEeccC
Q 004994 440 NSFSEGNFIGEGLLGSVYKAELP--------GGKLLAVKKLSNTVSQRQTDEEFLELASTISRL-RHGNIVELIGYCNEH 510 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~~--------~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~ 510 (720)
++|...+.||+|+||.||++... ++..+|+|.+..... .....++.+|+++++++ +|+||++++++|.+.
T Consensus 18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 96 (307)
T cd05098 18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDAT-EKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 96 (307)
T ss_pred HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCC-hHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecC
Confidence 46788899999999999999642 235799999975432 23345788899999999 799999999999999
Q ss_pred CeEEEEEeeCCCCCHHHHhhccch------------hccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEE
Q 004994 511 GQHLLVYDYGGNCTLHDLLHSDEE------------AHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILL 578 (720)
Q Consensus 511 ~~~~lv~e~~~~gsL~~~l~~~~~------------~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl 578 (720)
+..++||||+++|+|.+++..... ....++|.++.+++.+++.||+|||+. +++||||||+||++
T Consensus 97 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~Nill 173 (307)
T cd05098 97 GPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLV 173 (307)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHHheEE
Confidence 999999999999999999965321 123588999999999999999999987 99999999999999
Q ss_pred cCCCCeEEccccCCCCCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccc
Q 004994 579 DEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQS 656 (720)
Q Consensus 579 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~ 656 (720)
++++.+||+|||+++................+..|+|||.. ...++.++|||||||++|||++ |+.||..........
T Consensus 174 ~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~~~~ 253 (307)
T cd05098 174 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK 253 (307)
T ss_pred cCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHH
Confidence 99999999999999766432211111112234579999987 5568999999999999999998 888986432111000
Q ss_pred hhhhcccccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhC
Q 004994 657 LVRWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCMI 720 (720)
Q Consensus 657 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~ 720 (720)
.. ........+...+.++.+++.+||+.+|++|||+.||++.|++++
T Consensus 254 ~~-----------------~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~ 300 (307)
T cd05098 254 LL-----------------KEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 300 (307)
T ss_pred HH-----------------HcCCCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHH
Confidence 00 000000111223467889999999999999999999999998863
No 99
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.9e-38 Score=314.62 Aligned_cols=249 Identities=22% Similarity=0.355 Sum_probs=205.8
Q ss_pred hcCCCCCCeeccCCCceEEEE-EeCCCcEEEEEEeccccc-ccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEE
Q 004994 439 TNSFSEGNFIGEGLLGSVYKA-ELPGGKLLAVKKLSNTVS-QRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLV 516 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~-~~~~g~~vavK~l~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 516 (720)
..+|+..+.||+|.||+|-+| ++..|+.||||.+++... +.++...+++|+++|..|+||||+.+|++|+..+...+|
T Consensus 52 kHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIviv 131 (668)
T KOG0611|consen 52 KHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIV 131 (668)
T ss_pred hhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEE
Confidence 345667788999999999999 567899999999986543 344556789999999999999999999999999999999
Q ss_pred EeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCC
Q 004994 517 YDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLF 596 (720)
Q Consensus 517 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~ 596 (720)
|||..+|.|.|++.. ...++.....+++.||..|+.|+|.. ++||||||.+|||+|.++++||+|||++..+.
T Consensus 132 MEYaS~GeLYDYiSe----r~~LsErEaRhfFRQIvSAVhYCHkn---rVvHRDLKLENILLD~N~NiKIADFGLSNly~ 204 (668)
T KOG0611|consen 132 MEYASGGELYDYISE----RGSLSEREARHFFRQIVSAVHYCHKN---RVVHRDLKLENILLDQNNNIKIADFGLSNLYA 204 (668)
T ss_pred EEecCCccHHHHHHH----hccccHHHHHHHHHHHHHHHHHHhhc---cceecccchhheeecCCCCeeeeccchhhhhc
Confidence 999999999999954 46788999999999999999999987 99999999999999999999999999998875
Q ss_pred CCCCcccccCccccccCCCCccCCC-CC-CCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhh
Q 004994 597 SGSTNELSEGLLTAHGSGAPEFESG-SY-SCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRM 674 (720)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~aPE~~~~-~~-~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (720)
.. .+...++|.+-|.+||+..| +| ++.+|-||+||+||.|+.|..||++.+... +++. +.. + .+
T Consensus 205 ~~---kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~---lvrQ----Is~-G---aY 270 (668)
T KOG0611|consen 205 DK---KFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKR---LVRQ----ISR-G---AY 270 (668)
T ss_pred cc---cHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHH---HHHH----hhc-c---cc
Confidence 43 34455788999999999954 45 678999999999999999999998754321 1111 000 0 01
Q ss_pred cCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q 004994 675 VDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDL 716 (720)
Q Consensus 675 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L 716 (720)
..| +.+....-|+..||..+|++|-|+++|..|.
T Consensus 271 rEP--------~~PSdA~gLIRwmLmVNP~RRATieDiAsHW 304 (668)
T KOG0611|consen 271 REP--------ETPSDASGLIRWMLMVNPERRATIEDIASHW 304 (668)
T ss_pred cCC--------CCCchHHHHHHHHHhcCcccchhHHHHhhhh
Confidence 111 1234566889999999999999999998774
No 100
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.7e-38 Score=328.52 Aligned_cols=252 Identities=23% Similarity=0.329 Sum_probs=209.6
Q ss_pred cCCCCCCeeccCCCceEEEEEeC-CCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCe-EEEEE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQ-HLLVY 517 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~-~~lv~ 517 (720)
++|...+.+|+|+||.++.++++ +++.|++|.+..........+....|+.++++++|||||.+++.|.+++. .+|||
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm 83 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM 83 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence 46788899999999999999654 67899999998665555555678899999999999999999999998887 99999
Q ss_pred eeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCC
Q 004994 518 DYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFS 597 (720)
Q Consensus 518 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~ 597 (720)
+|++||++.+.+.... ...|+......++.|+..|+.|||+. .|+|||||+.||+++.+..|||+|||+|+.+..
T Consensus 84 ~Y~eGg~l~~~i~~~k--~~~f~E~~i~~~~~Q~~~av~ylH~~---~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~ 158 (426)
T KOG0589|consen 84 EYCEGGDLAQLIKEQK--GVLFPEERILKWFVQILLAVNYLHEN---RVLHRDLKCANIFLTKDKKVKLGDFGLAKILNP 158 (426)
T ss_pred eecCCCCHHHHHHHHh--hccccHHHHHHHHHHHHHHHHHHHhh---hhhcccchhhhhhccccCceeecchhhhhhcCC
Confidence 9999999999997543 46788999999999999999999976 899999999999999999999999999999854
Q ss_pred CCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcC
Q 004994 598 GSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVD 676 (720)
Q Consensus 598 ~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (720)
.. .......||+.|+.||++ ..+|+.|+||||+||++|||++-+.+|...+.. .++.. .......
T Consensus 159 ~~--~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~---~Li~k---------i~~~~~~ 224 (426)
T KOG0589|consen 159 ED--SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMS---ELILK---------INRGLYS 224 (426)
T ss_pred ch--hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchH---HHHHH---------HhhccCC
Confidence 32 245568899999999999 457999999999999999999999999764321 11110 1111111
Q ss_pred CCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 677 PSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 677 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
| .+.....++..++..|+..+|+.||++.+++.+
T Consensus 225 P-----lp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 225 P-----LPSMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred C-----CCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 1 223345688999999999999999999999875
No 101
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-39 Score=303.55 Aligned_cols=252 Identities=21% Similarity=0.279 Sum_probs=205.4
Q ss_pred HhcCCCCCCeeccCCCceEEEE-EeCCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEE
Q 004994 438 YTNSFSEGNFIGEGLLGSVYKA-ELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLV 516 (720)
Q Consensus 438 ~~~~~~~~~~lg~G~~g~Vy~~-~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 516 (720)
+++.|+.-+.||+|.|+.||++ ...+|+.+|+|.+..........+++.+|+++-+.|+|||||++.+.+.+.+..|+|
T Consensus 9 f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylv 88 (355)
T KOG0033|consen 9 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 88 (355)
T ss_pred cchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEE
Confidence 4567777789999999999999 557899999999875444445678899999999999999999999999999999999
Q ss_pred EeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcC---CCCeEEccccCCC
Q 004994 517 YDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDE---KLIVRVSDCGLAP 593 (720)
Q Consensus 517 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~---~~~~kl~DFGla~ 593 (720)
+|+|.|++|..-+.. +..+++...-..+.|+.++|.|.|.. +|||||+||+|+|+.. .--+||+|||+|.
T Consensus 89 Fe~m~G~dl~~eIV~----R~~ySEa~aSH~~rQiLeal~yCH~n---~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi 161 (355)
T KOG0033|consen 89 FDLVTGGELFEDIVA----REFYSEADASHCIQQILEALAYCHSN---GIVHRDLKPENLLLASKAKGAAVKLADFGLAI 161 (355)
T ss_pred EecccchHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeeeeccCCCceeecccceEE
Confidence 999999998765532 24566777788999999999999998 9999999999999953 3468999999999
Q ss_pred CCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhh
Q 004994 594 LLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALS 672 (720)
Q Consensus 594 ~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (720)
.+. ......+..||++|+|||+. ..+|+..+|||+.|||||-++.|.+||.+.+...- ..
T Consensus 162 ~l~---~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rl----------------ye 222 (355)
T KOG0033|consen 162 EVN---DGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRL----------------YE 222 (355)
T ss_pred EeC---CccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHH----------------HH
Confidence 886 34456778999999999999 56899999999999999999999999976332111 11
Q ss_pred hhc--CCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 673 RMV--DPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 673 ~~~--~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
++. +....+.+.....++..+|+.+||..||++|.|+.|++.|
T Consensus 223 ~I~~g~yd~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~H 267 (355)
T KOG0033|consen 223 QIKAGAYDYPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALKH 267 (355)
T ss_pred HHhccccCCCCcccCcCCHHHHHHHHHHhccChhhhccHHHHhCC
Confidence 111 1112222334455778999999999999999999999865
No 102
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=1.8e-37 Score=329.38 Aligned_cols=243 Identities=21% Similarity=0.302 Sum_probs=191.6
Q ss_pred CeeccCCCceEEEEEe----CCCcEEEEEEeccccc--ccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEee
Q 004994 446 NFIGEGLLGSVYKAEL----PGGKLLAVKKLSNTVS--QRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDY 519 (720)
Q Consensus 446 ~~lg~G~~g~Vy~~~~----~~g~~vavK~l~~~~~--~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 519 (720)
+.||+|+||.||++.. .+++.||||++++... .......+..|+++++.++||||+++++++...+..++||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 6799999999999964 3578999999975321 123345678899999999999999999999999999999999
Q ss_pred CCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCC
Q 004994 520 GGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGS 599 (720)
Q Consensus 520 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~ 599 (720)
+++++|.+++.. ...+.+.....++.|+++||.|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 82 ~~~~~L~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 154 (323)
T cd05584 82 LSGGELFMHLER----EGIFMEDTACFYLSEISLALEHLHQQ---GIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEG 154 (323)
T ss_pred CCCchHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEeeCcCCeecccCC
Confidence 999999998853 34567788888999999999999987 99999999999999999999999999987542221
Q ss_pred CcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcCCC
Q 004994 600 TNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPS 678 (720)
Q Consensus 600 ~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (720)
.......++..|+|||+. ...++.++|||||||++|||++|+.||........ ...+....
T Consensus 155 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~----------------~~~~~~~~ 216 (323)
T cd05584 155 --TVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKT----------------IDKILKGK 216 (323)
T ss_pred --CcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHH----------------HHHHHcCC
Confidence 122335688999999998 44688999999999999999999999975432111 11111111
Q ss_pred CCchhhHHHHHHHHHHHHHHhccCCCCCC-----CHHHHHHH
Q 004994 679 LDGAYLAKSLSRFADIISRCVQWEPGFRP-----PMSEIVQD 715 (720)
Q Consensus 679 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~evl~~ 715 (720)
. ..+......+.+++.+||+.||++|| ++++++++
T Consensus 217 ~--~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h 256 (323)
T cd05584 217 L--NLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSH 256 (323)
T ss_pred C--CCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcC
Confidence 0 01112235678999999999999999 88888764
No 103
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1.8e-37 Score=323.17 Aligned_cols=256 Identities=24% Similarity=0.356 Sum_probs=200.2
Q ss_pred CCCCCeeccCCCceEEEEEeC------CCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEE
Q 004994 442 FSEGNFIGEGLLGSVYKAELP------GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLL 515 (720)
Q Consensus 442 ~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~l 515 (720)
|...+.||+|+||+||+|... +++.||+|++..... ....+.|.+|+.+++.++||||+++++++.+.+..++
T Consensus 7 ~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~ 85 (283)
T cd05091 7 VRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAE-GPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSM 85 (283)
T ss_pred HHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCC-HHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEE
Confidence 445678999999999999653 257899999975432 2334678899999999999999999999999999999
Q ss_pred EEeeCCCCCHHHHhhccc------------hhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCC
Q 004994 516 VYDYGGNCTLHDLLHSDE------------EAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLI 583 (720)
Q Consensus 516 v~e~~~~gsL~~~l~~~~------------~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~ 583 (720)
++||+.+++|.+++.... .....+++..+.+++.|+++||+|||+. +|+||||||+||++++++.
T Consensus 86 ~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~---gi~H~dlkp~Nil~~~~~~ 162 (283)
T cd05091 86 IFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSH---HVVHKDLATRNVLVFDKLN 162 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHc---CccccccchhheEecCCCc
Confidence 999999999999985321 1123578888999999999999999987 8999999999999999999
Q ss_pred eEEccccCCCCCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhc
Q 004994 584 VRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWA 661 (720)
Q Consensus 584 ~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~ 661 (720)
+||+|||+++.+.............+++.|+|||.. .+.++.++|||||||++|||+| |..||....... ..
T Consensus 163 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~---~~--- 236 (283)
T cd05091 163 VKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQD---VI--- 236 (283)
T ss_pred eEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHH---HH---
Confidence 999999999876443322222333456789999987 5678999999999999999998 888886532211 11
Q ss_pred ccccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q 004994 662 IPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLC 718 (720)
Q Consensus 662 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 718 (720)
..+.+... ...+...+..+.+++.+||+.+|++||++.||++.|+.
T Consensus 237 ----------~~i~~~~~-~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 237 ----------EMIRNRQV-LPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred ----------HHHHcCCc-CCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 11111111 01122345678899999999999999999999999874
No 104
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=6.7e-38 Score=333.00 Aligned_cols=244 Identities=22% Similarity=0.285 Sum_probs=193.0
Q ss_pred CeeccCCCceEEEEEe-CCCcEEEEEEeccccc-ccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEeeCCCC
Q 004994 446 NFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVS-QRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDYGGNC 523 (720)
Q Consensus 446 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~g 523 (720)
+.||+|+||+||++.. .+|+.||+|.+.+... .......+..|+++++.++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 4699999999999954 5789999999975432 2233456788999999999999999999999999999999999999
Q ss_pred CHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCCCccc
Q 004994 524 TLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNEL 603 (720)
Q Consensus 524 sL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~~~ 603 (720)
+|.+++.. ...+++.....++.|++.||+|||+. .+|+||||||+|||++.++.+||+|||+++...... ..
T Consensus 81 ~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~lH~~--~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~--~~ 152 (325)
T cd05594 81 ELFFHLSR----ERVFSEDRARFYGAEIVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG--AT 152 (325)
T ss_pred cHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhc--CCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCC--cc
Confidence 99988753 34688999999999999999999972 289999999999999999999999999987542211 11
Q ss_pred ccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcCCCCCch
Q 004994 604 SEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDGA 682 (720)
Q Consensus 604 ~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 682 (720)
.....++..|+|||.+ .+.++.++|||||||++|||+||+.||...........+... ...
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~--------------~~~---- 214 (325)
T cd05594 153 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME--------------EIR---- 214 (325)
T ss_pred cccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcC--------------CCC----
Confidence 2234688999999998 557899999999999999999999999654321111111000 000
Q ss_pred hhHHHHHHHHHHHHHHhccCCCCCC-----CHHHHHHH
Q 004994 683 YLAKSLSRFADIISRCVQWEPGFRP-----PMSEIVQD 715 (720)
Q Consensus 683 ~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~evl~~ 715 (720)
.+.....++.+++.+||+.||++|+ ++.+++++
T Consensus 215 ~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 252 (325)
T cd05594 215 FPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQH 252 (325)
T ss_pred CCCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcC
Confidence 1112235688999999999999996 89999865
No 105
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=5.2e-37 Score=314.93 Aligned_cols=248 Identities=24% Similarity=0.336 Sum_probs=194.2
Q ss_pred eeccCCCceEEEEEe---CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEeeCCCC
Q 004994 447 FIGEGLLGSVYKAEL---PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDYGGNC 523 (720)
Q Consensus 447 ~lg~G~~g~Vy~~~~---~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~g 523 (720)
.||+|+||.||+|.+ .+++.+|+|+++.........+++.+|+.+++.++||||+++++++.. +..++||||++++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEA-ESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCcEEEEecCCCC
Confidence 589999999999954 357899999987554444456789999999999999999999999864 4678999999999
Q ss_pred CHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCCCccc
Q 004994 524 TLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNEL 603 (720)
Q Consensus 524 sL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~~~ 603 (720)
+|.+++.. ...+++.....++.|++.||+|||.. +|+||||||+||++++++.+||+|||+++.+........
T Consensus 81 ~L~~~l~~----~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 153 (257)
T cd05116 81 PLNKFLQK----NKHVTEKNITELVHQVSMGMKYLEET---NFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYK 153 (257)
T ss_pred cHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchhhEEEcCCCeEEECCCccccccCCCCCeee
Confidence 99999853 24588899999999999999999987 899999999999999999999999999987643322111
Q ss_pred -ccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcccccCchhhhhhhcCCCCC
Q 004994 604 -SEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLD 680 (720)
Q Consensus 604 -~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (720)
.....++..|+|||.. .+.++.++|||||||++|||+| |+.||...........+ .....
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i-----------------~~~~~ 216 (257)
T cd05116 154 AKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMI-----------------ESGER 216 (257)
T ss_pred ecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH-----------------HCCCC
Confidence 1112234689999987 4568889999999999999998 99999754321111111 00000
Q ss_pred chhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 681 GAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 681 ~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
...+...+.++.+++.+||+.||++||++++|.+.|++.
T Consensus 217 ~~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~ 255 (257)
T cd05116 217 MECPQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRNY 255 (257)
T ss_pred CCCCCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhcc
Confidence 011122346788999999999999999999999999863
No 106
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=3.2e-37 Score=324.73 Aligned_cols=261 Identities=23% Similarity=0.389 Sum_probs=202.2
Q ss_pred hcCCCCCCeeccCCCceEEEEEe--------CCCcEEEEEEecccccccccHHHHHHHHHHHHcc-CCCceeEEEeEecc
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAEL--------PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRL-RHGNIVELIGYCNE 509 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~--------~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~ 509 (720)
..+|...+.||+|+||.||+|.. .++..||+|.+..... ....+.+.+|+.+++.+ +||||+++++++..
T Consensus 14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~ 92 (304)
T cd05101 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDAT-EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 92 (304)
T ss_pred HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccc-hHHHHHHHHHHHHHHhhccCCCchheeEEEec
Confidence 34677789999999999999963 1245799999875422 23446788999999999 89999999999999
Q ss_pred CCeEEEEEeeCCCCCHHHHhhccch------------hccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeE
Q 004994 510 HGQHLLVYDYGGNCTLHDLLHSDEE------------AHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNIL 577 (720)
Q Consensus 510 ~~~~~lv~e~~~~gsL~~~l~~~~~------------~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiL 577 (720)
.+..++||||+++|+|.+++..... ....+++..+.+++.|+++||+|||+. +|+||||||+||+
T Consensus 93 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~Nil 169 (304)
T cd05101 93 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQ---KCIHRDLAARNVL 169 (304)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHC---CeeecccccceEE
Confidence 9999999999999999999864321 123578889999999999999999987 9999999999999
Q ss_pred EcCCCCeEEccccCCCCCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCcccc
Q 004994 578 LDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQ 655 (720)
Q Consensus 578 l~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~ 655 (720)
+++++.+||+|||+++.+.............++..|+|||.. ...++.++||||||+++|||++ |..||........
T Consensus 170 i~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~- 248 (304)
T cd05101 170 VTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL- 248 (304)
T ss_pred EcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHH-
Confidence 999999999999999876433222222223345679999987 5568999999999999999998 8888864321111
Q ss_pred chhhhcccccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhC
Q 004994 656 SLVRWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCMI 720 (720)
Q Consensus 656 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~ 720 (720)
... +........+..++..+.+++.+||+.+|++|||+.|+++.|++++
T Consensus 249 --~~~--------------~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~ 297 (304)
T cd05101 249 --FKL--------------LKEGHRMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRIL 297 (304)
T ss_pred --HHH--------------HHcCCcCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHH
Confidence 100 0000000011233467889999999999999999999999999863
No 107
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=3.5e-37 Score=324.32 Aligned_cols=267 Identities=20% Similarity=0.280 Sum_probs=195.3
Q ss_pred hcCCCCCCeeccCCCceEEEEEeC-CCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEE
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVY 517 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 517 (720)
.++|...+.||+|+||+||+|... +++.||||++..... ......+.+|++++++++||||+++++++.+.+..++||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 82 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEE-EGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVF 82 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccc-cccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEE
Confidence 357888999999999999999664 789999999874422 223346778999999999999999999999999999999
Q ss_pred eeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCC
Q 004994 518 DYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFS 597 (720)
Q Consensus 518 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~ 597 (720)
||+. ++|.+++... ...+++.....++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++....
T Consensus 83 e~~~-~~l~~~~~~~---~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 155 (303)
T cd07869 83 EYVH-TDLCQYMDKH---PGGLHPENVKLFLFQLLRGLSYIHQR---YILHRDLKPQNLLISDTGELKLADFGLARAKSV 155 (303)
T ss_pred ECCC-cCHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECCCCcceeccC
Confidence 9996 5777777532 34578888999999999999999987 999999999999999999999999999875432
Q ss_pred CCCcccccCccccccCCCCccCC--CCCCCccchHhHHHHHHHHHhCCCCCCCCCCccc-cchhhhcc--c------ccC
Q 004994 598 GSTNELSEGLLTAHGSGAPEFES--GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGE-QSLVRWAI--P------RLH 666 (720)
Q Consensus 598 ~~~~~~~~~~~~~~~~~aPE~~~--~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~-~~~~~~~~--~------~~~ 666 (720)
.. .......++..|+|||... ..++.++|||||||++|||+||+.||........ ........ + ...
T Consensus 156 ~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (303)
T cd07869 156 PS--HTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVH 233 (303)
T ss_pred CC--ccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchh
Confidence 11 1122345688999999873 3588999999999999999999999975432111 00000000 0 000
Q ss_pred c-----hhhhhhhcCCCCCchhh-HHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 667 D-----IDALSRMVDPSLDGAYL-AKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 667 ~-----~~~~~~~~~~~~~~~~~-~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
. .+.........+..... ......+.+++.+||+.||++|||++|+++|
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h 288 (303)
T cd07869 234 SLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSH 288 (303)
T ss_pred hccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcC
Confidence 0 00000000000000000 0112467899999999999999999999874
No 108
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=4e-37 Score=322.88 Aligned_cols=257 Identities=23% Similarity=0.341 Sum_probs=198.0
Q ss_pred cCCCCCCeeccCCCceEEEEEeC-CCc--EEEEEEecccccccccHHHHHHHHHHHHcc-CCCceeEEEeEeccCCeEEE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAELP-GGK--LLAVKKLSNTVSQRQTDEEFLELASTISRL-RHGNIVELIGYCNEHGQHLL 515 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~--~vavK~l~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~l 515 (720)
++|+..+.||+|+||.||+|... ++. .+++|.++... .....+.|.+|+++++++ +||||+++++++.+.+..++
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l 80 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFA-SENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYI 80 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccC-CHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceE
Confidence 46888899999999999999764 343 47888886322 233456789999999999 79999999999999999999
Q ss_pred EEeeCCCCCHHHHhhccch------------hccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCC
Q 004994 516 VYDYGGNCTLHDLLHSDEE------------AHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLI 583 (720)
Q Consensus 516 v~e~~~~gsL~~~l~~~~~------------~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~ 583 (720)
|+||+++++|.+++..... ....+++.....++.|++.||+|||+. +|+||||||+|||+++++.
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~ 157 (297)
T cd05089 81 AIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEK---QFIHRDLAARNVLVGENLA 157 (297)
T ss_pred EEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCcCCcceEEECCCCe
Confidence 9999999999999864321 123588899999999999999999987 9999999999999999999
Q ss_pred eEEccccCCCCCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhc
Q 004994 584 VRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWA 661 (720)
Q Consensus 584 ~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~ 661 (720)
+||+|||++........ ......+..|+|||.. ...++.++|||||||++|||++ |+.||........ ..
T Consensus 158 ~kl~dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~---~~-- 229 (297)
T cd05089 158 SKIADFGLSRGEEVYVK---KTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAEL---YE-- 229 (297)
T ss_pred EEECCcCCCccccceec---cCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHH---HH--
Confidence 99999999864321101 1111224569999988 5568999999999999999997 9999965432111 00
Q ss_pred ccccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhC
Q 004994 662 IPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCMI 720 (720)
Q Consensus 662 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~ 720 (720)
. +........+...+..+.+++.+||+.+|.+|||++++++.|++++
T Consensus 230 -----------~-~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~ 276 (297)
T cd05089 230 -----------K-LPQGYRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRML 276 (297)
T ss_pred -----------H-HhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 0 0000000011123457889999999999999999999999998763
No 109
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=2e-37 Score=318.65 Aligned_cols=255 Identities=24% Similarity=0.376 Sum_probs=204.7
Q ss_pred hcCCCCCCeeccCCCceEEEEEeCCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEe
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYD 518 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 518 (720)
..+|+..+.||+|+||.||+|...+++.+|+|.+.... .....++.+|+.+++.++|+||+++++++.+.+..++|||
T Consensus 5 ~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 82 (261)
T cd05148 5 REEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDD--LLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITE 82 (261)
T ss_pred HHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccc--hhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEe
Confidence 35678889999999999999988779999999987542 2345678899999999999999999999999999999999
Q ss_pred eCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCC
Q 004994 519 YGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSG 598 (720)
Q Consensus 519 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~ 598 (720)
|+++++|.+++.... ...+++..+..++.+++.||+|||+. +|+||||||+||++++++.+||+|||.+......
T Consensus 83 ~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~i~~al~~lH~~---~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~ 157 (261)
T cd05148 83 LMEKGSLLAFLRSPE--GQVLPVASLIDMACQVAEGMAYLEEQ---NSIHRDLAARNILVGEDLVCKVADFGLARLIKED 157 (261)
T ss_pred ecccCCHHHHHhcCC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccCcceEEEcCCceEEEccccchhhcCCc
Confidence 999999999997532 34688999999999999999999987 8999999999999999999999999999776432
Q ss_pred CCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcccccCchhhhhhhcC
Q 004994 599 STNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVD 676 (720)
Q Consensus 599 ~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (720)
... .....++..|++||.. .+.++.++||||||+++|||++ |+.||....... ..... ..
T Consensus 158 ~~~--~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~---~~~~~-------------~~ 219 (261)
T cd05148 158 VYL--SSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHE---VYDQI-------------TA 219 (261)
T ss_pred ccc--ccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHH---HHHHH-------------Hh
Confidence 211 1123345679999987 4578999999999999999998 899996533211 11110 00
Q ss_pred CCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 677 PSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 677 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
......+...++.+.+++.+||+.||++|||++++++.|+.+
T Consensus 220 -~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~ 261 (261)
T cd05148 220 -GYRMPCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDNI 261 (261)
T ss_pred -CCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence 000011123346788999999999999999999999999864
No 110
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=5.4e-37 Score=320.42 Aligned_cols=260 Identities=23% Similarity=0.342 Sum_probs=200.8
Q ss_pred hcCCCCCCeeccCCCceEEEEEeC------CCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCe
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAELP------GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQ 512 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~ 512 (720)
.++|+..+.||+|+||.||+|... .+..||+|.+..... ......+.+|+.+++.++|+||+++++++.+.+.
T Consensus 5 ~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 83 (288)
T cd05061 5 REKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESAS-LRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQP 83 (288)
T ss_pred HHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCC-HHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 467888999999999999999543 245899999864432 2334568899999999999999999999999999
Q ss_pred EEEEEeeCCCCCHHHHhhccch------hccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEE
Q 004994 513 HLLVYDYGGNCTLHDLLHSDEE------AHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRV 586 (720)
Q Consensus 513 ~~lv~e~~~~gsL~~~l~~~~~------~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl 586 (720)
.++||||+++|+|.+++..... .....++.....++.+++.||.|||+. +|+||||||+||++++++.+||
T Consensus 84 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dikp~nili~~~~~~~L 160 (288)
T cd05061 84 TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKI 160 (288)
T ss_pred cEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCCChheEEEcCCCcEEE
Confidence 9999999999999999964221 123456778889999999999999987 9999999999999999999999
Q ss_pred ccccCCCCCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcccc
Q 004994 587 SDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPR 664 (720)
Q Consensus 587 ~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~ 664 (720)
+|||+++...............++..|+|||.. .+.++.++|||||||++|||++ |+.||....... ...
T Consensus 161 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~---~~~----- 232 (288)
T cd05061 161 GDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQ---VLK----- 232 (288)
T ss_pred CcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHH---HHH-----
Confidence 999999866433221111122345679999988 5678999999999999999998 788986432211 110
Q ss_pred cCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 665 LHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 665 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
.+.+.... ..+...+..+.+++.+||+.||++|||+.++++.|++.
T Consensus 233 --------~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~ 278 (288)
T cd05061 233 --------FVMDGGYL-DQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 278 (288)
T ss_pred --------HHHcCCCC-CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhh
Confidence 01111000 01112346789999999999999999999999999874
No 111
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=2.8e-37 Score=323.69 Aligned_cols=265 Identities=23% Similarity=0.343 Sum_probs=199.9
Q ss_pred cCCCCCCeeccCCCceEEEEEeCC---------------CcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAELPG---------------GKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELI 504 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~~~---------------g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~ 504 (720)
++|...+.||+|+||.||++.... ...||+|.++.... ......|.+|++++++++|+||++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~ei~~l~~l~h~~i~~~~ 83 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVT-KTARNDFLKEIKIMSRLKNPNIIRLL 83 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCC-HHHHHHHHHHHHHHHhCCCCCcCeEE
Confidence 578888999999999999986532 23589999875432 33456789999999999999999999
Q ss_pred eEeccCCeEEEEEeeCCCCCHHHHhhccch--------hccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCe
Q 004994 505 GYCNEHGQHLLVYDYGGNCTLHDLLHSDEE--------AHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNI 576 (720)
Q Consensus 505 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~--------~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~Ni 576 (720)
+++...+..++||||+++++|.+++..... ....+++..+.+++.++++||+|||+. +++||||||+||
T Consensus 84 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Ni 160 (295)
T cd05097 84 GVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASL---NFVHRDLATRNC 160 (295)
T ss_pred EEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhc---CeeccccChhhE
Confidence 999999999999999999999999854321 112478899999999999999999987 999999999999
Q ss_pred EEcCCCCeEEccccCCCCCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh--CCCCCCCCCCcc
Q 004994 577 LLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT--GRKPYDRSRPRG 653 (720)
Q Consensus 577 Ll~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt--G~~Pf~~~~~~~ 653 (720)
++++++.+||+|||+++.+.............++..|+|||.. .+.++.++|||||||++|||++ |..||.......
T Consensus 161 ll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~ 240 (295)
T cd05097 161 LVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQ 240 (295)
T ss_pred EEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHH
Confidence 9999999999999999866433222222223346689999987 5678999999999999999998 667776433211
Q ss_pred ccchhhhcccccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q 004994 654 EQSLVRWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLC 718 (720)
Q Consensus 654 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 718 (720)
.+................ ......+..+.+++.+||+.||++||++++|++.|++
T Consensus 241 ---~~~~~~~~~~~~~~~~~~-------~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~~ 295 (295)
T cd05097 241 ---VIENTGEFFRNQGRQIYL-------SQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLRE 295 (295)
T ss_pred ---HHHHHHHhhhhccccccC-------CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhC
Confidence 111000000000000000 0011123578999999999999999999999999874
No 112
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=6.5e-37 Score=318.93 Aligned_cols=267 Identities=23% Similarity=0.320 Sum_probs=200.4
Q ss_pred CCCCCeeccCCCceEEEEEe-----CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccC--CeEE
Q 004994 442 FSEGNFIGEGLLGSVYKAEL-----PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEH--GQHL 514 (720)
Q Consensus 442 ~~~~~~lg~G~~g~Vy~~~~-----~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~--~~~~ 514 (720)
|...+.||+|+||+||++.. .+++.||+|.+..... ....+.|.+|++++++++||||+++++++... ...+
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (283)
T cd05080 6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECG-QQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQ 84 (283)
T ss_pred ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccC-hHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEE
Confidence 37789999999999987642 3578999999875422 23456788999999999999999999988653 4688
Q ss_pred EEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCC
Q 004994 515 LVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPL 594 (720)
Q Consensus 515 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~ 594 (720)
+||||+++++|.+++.. ..+++..+..++.+++.||.|||+. +|+||||||+|||+++++.+||+|||+++.
T Consensus 85 lv~e~~~~~~l~~~~~~-----~~l~~~~~~~i~~~l~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~ 156 (283)
T cd05080 85 LIMEYVPLGSLRDYLPK-----HKLNLAQLLLFAQQICEGMAYLHSQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKA 156 (283)
T ss_pred EEecCCCCCCHHHHHHH-----cCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccChheEEEcCCCcEEEeecccccc
Confidence 99999999999998853 3589999999999999999999987 899999999999999999999999999987
Q ss_pred CCCCCCc-ccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhh
Q 004994 595 LFSGSTN-ELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALS 672 (720)
Q Consensus 595 ~~~~~~~-~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (720)
....... .......++..|+|||.. .+.++.++||||||+++|||+||+.||....... ............ ...+.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~-~~~~~~~~~~~~-~~~~~ 234 (283)
T cd05080 157 VPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKF-EEMIGPKQGQMT-VVRLI 234 (283)
T ss_pred cCCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchh-hhhhcccccccc-hhhhh
Confidence 6433221 111222345668999987 4578999999999999999999999986533211 111111110110 01111
Q ss_pred hhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 673 RMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 673 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
..++.......+...+.++.+++.+||+.+|++|||++++++.|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~ 281 (283)
T cd05080 235 ELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEM 281 (283)
T ss_pred hhhhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHh
Confidence 11111111111223456889999999999999999999999999986
No 113
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=1.4e-36 Score=338.61 Aligned_cols=268 Identities=19% Similarity=0.257 Sum_probs=190.8
Q ss_pred HHHHHHhcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCC------CceeEEEe
Q 004994 433 ASLQQYTNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRH------GNIVELIG 505 (720)
Q Consensus 433 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H------~niv~l~~ 505 (720)
+++....++|...+.||+|+||+||+|.. .+++.||||+++... ....++..|++++++++| .+++.+++
T Consensus 122 ~~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~ 198 (467)
T PTZ00284 122 EDIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP---KYTRDAKIEIQFMEKVRQADPADRFPLMKIQR 198 (467)
T ss_pred CccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch---hhHHHHHHHHHHHHHHhhcCcccCcceeeeEE
Confidence 34444568899999999999999999965 568899999996421 223445566677666654 45899999
Q ss_pred EeccC-CeEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCC--
Q 004994 506 YCNEH-GQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKL-- 582 (720)
Q Consensus 506 ~~~~~-~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~-- 582 (720)
++... ++.++|||++ +++|.+++.. ...+++.....|+.|++.||.|||+. .+||||||||+|||++.++
T Consensus 199 ~~~~~~~~~~iv~~~~-g~~l~~~l~~----~~~l~~~~~~~i~~qi~~aL~yLH~~--~gIiHrDlKP~NILl~~~~~~ 271 (467)
T PTZ00284 199 YFQNETGHMCIVMPKY-GPCLLDWIMK----HGPFSHRHLAQIIFQTGVALDYFHTE--LHLMHTDLKPENILMETSDTV 271 (467)
T ss_pred EEEcCCceEEEEEecc-CCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhc--CCeecCCCCHHHEEEecCCcc
Confidence 88754 5788999987 5578887743 34688999999999999999999973 2899999999999998765
Q ss_pred --------------CeEEccccCCCCCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCC
Q 004994 583 --------------IVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYD 647 (720)
Q Consensus 583 --------------~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~ 647 (720)
.+||+|||.+..... ......++..|+|||++ ...|+.++|||||||++|||+||+.||.
T Consensus 272 ~~~~~~~~~~~~~~~vkl~DfG~~~~~~~-----~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~ 346 (467)
T PTZ00284 272 VDPVTNRALPPDPCRVRICDLGGCCDERH-----SRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYD 346 (467)
T ss_pred cccccccccCCCCceEEECCCCccccCcc-----ccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 499999998864321 12235688999999998 5579999999999999999999999997
Q ss_pred CCCCccccchhhhcccccCch-------hhhhhhcC------CCCCch-----------hhHHHHHHHHHHHHHHhccCC
Q 004994 648 RSRPRGEQSLVRWAIPRLHDI-------DALSRMVD------PSLDGA-----------YLAKSLSRFADIISRCVQWEP 703 (720)
Q Consensus 648 ~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~------~~~~~~-----------~~~~~~~~l~~l~~~cl~~dP 703 (720)
.....+....+......+... .....+++ +..... ........+.+|+.+||+.||
T Consensus 347 ~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP 426 (467)
T PTZ00284 347 THDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDR 426 (467)
T ss_pred CCChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcCh
Confidence 654322222211111111000 00000000 000000 000113467899999999999
Q ss_pred CCCCCHHHHHHH
Q 004994 704 GFRPPMSEIVQD 715 (720)
Q Consensus 704 ~~RPt~~evl~~ 715 (720)
++|||++|+++|
T Consensus 427 ~~R~ta~e~L~H 438 (467)
T PTZ00284 427 QKRLNARQMTTH 438 (467)
T ss_pred hhCCCHHHHhcC
Confidence 999999999975
No 114
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=6.9e-38 Score=336.72 Aligned_cols=253 Identities=21% Similarity=0.287 Sum_probs=200.9
Q ss_pred cCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEeccccc-ccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVS-QRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVY 517 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 517 (720)
++|...+.||+|+||+||+|.. .+|+.||||++.+... .......+.+|++++..++|+||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 3678889999999999999965 4789999999975432 2244567889999999999999999999999999999999
Q ss_pred eeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCC
Q 004994 518 DYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFS 597 (720)
Q Consensus 518 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~ 597 (720)
||+++++|.+++... ..+++.....++.++++||+|||.. +|+||||||+|||++.++.+||+|||+++.+..
T Consensus 81 e~~~~~~L~~~l~~~----~~l~~~~~~~i~~qi~~aL~~LH~~---giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~ 153 (350)
T cd05573 81 EYMPGGDLMNLLIRK----DVFPEETARFYIAELVLALDSVHKL---GFIHRDIKPDNILIDADGHIKLADFGLCKKMNK 153 (350)
T ss_pred cCCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEeecCCCCccCcc
Confidence 999999999998642 5688889999999999999999996 999999999999999999999999999987643
Q ss_pred CC---------------------------CcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCC
Q 004994 598 GS---------------------------TNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRS 649 (720)
Q Consensus 598 ~~---------------------------~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~ 649 (720)
.. .........++..|+|||.+ ...++.++|||||||++|||++|+.||...
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~ 233 (350)
T cd05573 154 AKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSD 233 (350)
T ss_pred cCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCC
Confidence 32 00122335678999999998 457899999999999999999999999764
Q ss_pred CCcccc-chhhhcccccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCC-HHHHHHH
Q 004994 650 RPRGEQ-SLVRWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPP-MSEIVQD 715 (720)
Q Consensus 650 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt-~~evl~~ 715 (720)
...... .+..|.. . ...+.. ...+.++.+++.+|+. ||.+||+ ++|++++
T Consensus 234 ~~~~~~~~i~~~~~-~---------~~~p~~-----~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h 285 (350)
T cd05573 234 TLQETYNKIINWKE-S---------LRFPPD-----PPVSPEAIDLICRLLC-DPEDRLGSFEEIKSH 285 (350)
T ss_pred CHHHHHHHHhccCC-c---------ccCCCC-----CCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence 422111 1111100 0 000000 0134678899999997 9999999 9999875
No 115
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=7.6e-37 Score=315.71 Aligned_cols=257 Identities=25% Similarity=0.409 Sum_probs=201.0
Q ss_pred cCCCCCCeeccCCCceEEEEEeC-CC---cEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAELP-GG---KLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLL 515 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~~-~g---~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~l 515 (720)
++|+..+.||+|+||.||+|... ++ ..+|+|.+..... ....+.+..|++++++++|+||+++++++.+.+..++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (268)
T cd05063 5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYT-EKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMI 83 (268)
T ss_pred HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCC-HHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEE
Confidence 46777899999999999999764 33 3799999865432 2335678899999999999999999999999999999
Q ss_pred EEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCC
Q 004994 516 VYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLL 595 (720)
Q Consensus 516 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~ 595 (720)
||||+++++|.+++... ...+++.++..++.+++.||+|||+. +++||||||+||++++++.+||+|||++...
T Consensus 84 v~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~ 157 (268)
T cd05063 84 ITEYMENGALDKYLRDH---DGEFSSYQLVGMLRGIAAGMKYLSDM---NYVHRDLAARNILVNSNLECKVSDFGLSRVL 157 (268)
T ss_pred EEEcCCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEEcCCCcEEECCCccceec
Confidence 99999999999998532 24688999999999999999999987 8999999999999999999999999999766
Q ss_pred CCCCCcccc-cCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcccccCchhhhh
Q 004994 596 FSGSTNELS-EGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALS 672 (720)
Q Consensus 596 ~~~~~~~~~-~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (720)
......... .....+..|+|||+. .+.++.++|||||||++|||+| |+.||....... ....
T Consensus 158 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~---~~~~------------ 222 (268)
T cd05063 158 EDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHE---VMKA------------ 222 (268)
T ss_pred ccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHH---HHHH------------
Confidence 432211111 111224569999987 4578999999999999999998 999996433211 1110
Q ss_pred hhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhC
Q 004994 673 RMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCMI 720 (720)
Q Consensus 673 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~ 720 (720)
+.. ..........+.++.+++.+|++.+|++||++++|++.|+++|
T Consensus 223 -i~~-~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~~ 268 (268)
T cd05063 223 -IND-GFRLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKLL 268 (268)
T ss_pred -Hhc-CCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhhC
Confidence 000 0000011123467889999999999999999999999999886
No 116
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=4.3e-37 Score=322.44 Aligned_cols=266 Identities=24% Similarity=0.348 Sum_probs=203.0
Q ss_pred hcCCCCCCeeccCCCceEEEEEeCC-----------------CcEEEEEEecccccccccHHHHHHHHHHHHccCCCcee
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAELPG-----------------GKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIV 501 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~~~-----------------g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv 501 (720)
.++|...+.||+|+||.||+|...+ +..||+|.+..... ....+.+.+|++++++++||||+
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~ 82 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDAS-DNAREDFLKEVKILSRLSDPNIA 82 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccC-HHHHHHHHHHHHHHHhcCCCCEe
Confidence 3578888999999999999986532 24689999875432 24457889999999999999999
Q ss_pred EEEeEeccCCeEEEEEeeCCCCCHHHHhhccch-------hccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCC
Q 004994 502 ELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEE-------AHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSS 574 (720)
Q Consensus 502 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~-------~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~ 574 (720)
++++++...+..+++|||+++++|.+++..... ....+++.....++.+++.||+|||+. +|+||||||+
T Consensus 83 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~---~i~H~dlkp~ 159 (296)
T cd05051 83 RLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESL---NFVHRDLATR 159 (296)
T ss_pred EEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHc---Cccccccchh
Confidence 999999999999999999999999999864321 123689999999999999999999987 8999999999
Q ss_pred CeEEcCCCCeEEccccCCCCCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh--CCCCCCCCCC
Q 004994 575 NILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT--GRKPYDRSRP 651 (720)
Q Consensus 575 NiLl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt--G~~Pf~~~~~ 651 (720)
||++++++.++|+|||+++...............++..|+|||+. .+.++.++|||||||++|||++ |..||.....
T Consensus 160 Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~ 239 (296)
T cd05051 160 NCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTD 239 (296)
T ss_pred ceeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcCh
Confidence 999999999999999999866443322223334456789999987 4579999999999999999998 7778854322
Q ss_pred ccccchhhhcccccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q 004994 652 RGEQSLVRWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLC 718 (720)
Q Consensus 652 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 718 (720)
.. ............. .......+...+.++.+++.+||+.||++|||+.||++.|++
T Consensus 240 ~~---~~~~~~~~~~~~~-------~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~~ 296 (296)
T cd05051 240 QQ---VIENAGHFFRDDG-------RQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQR 296 (296)
T ss_pred HH---HHHHHHhcccccc-------ccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhcC
Confidence 11 1111100000000 000000111233578999999999999999999999999864
No 117
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=1e-37 Score=343.81 Aligned_cols=263 Identities=22% Similarity=0.305 Sum_probs=192.0
Q ss_pred hcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccC-------
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEH------- 510 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~------- 510 (720)
.++|...+.||+|+||+||+|.. .+++.||||++.... ....+|+.+++.++|||||++++++...
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~------~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~ 138 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP------QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEK 138 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc------chHHHHHHHHHhcCCCCCcceeeeEeecccccCCC
Confidence 45788899999999999999965 568999999885321 2345799999999999999999876321
Q ss_pred -CeEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCC-CeEEcc
Q 004994 511 -GQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKL-IVRVSD 588 (720)
Q Consensus 511 -~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~-~~kl~D 588 (720)
...++||||+++ ++.+++.........+++.....++.|+++||+|||+. +||||||||+|||++.++ .+||+|
T Consensus 139 ~~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~---~IiHrDLKp~NILl~~~~~~vkL~D 214 (440)
T PTZ00036 139 NIFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSK---FICHRDLKPQNLLIDPNTHTLKLCD 214 (440)
T ss_pred ceEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCcCHHHEEEcCCCCceeeec
Confidence 246799999985 67777654333446788999999999999999999987 899999999999999665 799999
Q ss_pred ccCCCCCCCCCCcccccCccccccCCCCccCC--CCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccC
Q 004994 589 CGLAPLLFSGSTNELSEGLLTAHGSGAPEFES--GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLH 666 (720)
Q Consensus 589 FGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~--~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~ 666 (720)
||+|+.+..... .....+++.|+|||.+. ..|+.++|||||||++|||+||++||...........+...... .
T Consensus 215 FGla~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~-p 290 (440)
T PTZ00036 215 FGSAKNLLAGQR---SVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGT-P 290 (440)
T ss_pred cccchhccCCCC---cccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCC-C
Confidence 999987643221 22345688999999873 36899999999999999999999999764332211111000000 0
Q ss_pred chhhhhhh------------cCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 667 DIDALSRM------------VDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 667 ~~~~~~~~------------~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
..+.+..+ ....+...++...+.++.+|+.+||+.||.+|||+.|+++|
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~h 351 (440)
T PTZ00036 291 TEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALAD 351 (440)
T ss_pred CHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCC
Confidence 00000000 00001111122234678899999999999999999999865
No 118
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=7e-37 Score=313.51 Aligned_cols=251 Identities=24% Similarity=0.381 Sum_probs=201.6
Q ss_pred CCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEee
Q 004994 441 SFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDY 519 (720)
Q Consensus 441 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 519 (720)
+|+..+.||+|++|.||+|.. .+++.|++|.+..........+.+..|++++++++||||+++++++.+.+..++||||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY 80 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence 466778999999999999965 4689999999875433445567889999999999999999999999999999999999
Q ss_pred CCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCC
Q 004994 520 GGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGS 599 (720)
Q Consensus 520 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~ 599 (720)
+++++|.++++.. ....+++.....++.+++.||.|||+. +++||||||+||+++.++.+||+|||+++.+....
T Consensus 81 ~~~~~L~~~l~~~--~~~~~~~~~~~~i~~~l~~al~~lH~~---~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~ 155 (256)
T cd08529 81 AENGDLHKLLKMQ--RGRPLPEDQVWRFFIQILLGLAHLHSK---KILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNT 155 (256)
T ss_pred CCCCcHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEeCCCCEEEcccccceeccCcc
Confidence 9999999998643 235688899999999999999999987 99999999999999999999999999988664322
Q ss_pred CcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcCCC
Q 004994 600 TNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPS 678 (720)
Q Consensus 600 ~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (720)
. ......++..|+|||+. .+.++.++|||||||++|||++|+.||....... .... +....
T Consensus 156 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~---~~~~-------------~~~~~ 217 (256)
T cd08529 156 N--FANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGA---LILK-------------IIRGV 217 (256)
T ss_pred c--hhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHH---HHHH-------------HHcCC
Confidence 1 12234567889999988 5568999999999999999999999996543111 1110 00000
Q ss_pred CCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 679 LDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 679 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.. .........+.+++.+||+.+|++||++.+++++
T Consensus 218 ~~-~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 218 FP-PVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred CC-CCccccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence 00 0111234578899999999999999999999875
No 119
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=2.4e-37 Score=335.89 Aligned_cols=253 Identities=21% Similarity=0.266 Sum_probs=194.2
Q ss_pred CCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccc-cccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEe
Q 004994 441 SFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTV-SQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYD 518 (720)
Q Consensus 441 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~-~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 518 (720)
.|...+.||+|+||+||+|.. .+++.||||++.+.. ......+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 577789999999999999954 578999999997532 223345678899999999999999999999999999999999
Q ss_pred eCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCC
Q 004994 519 YGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSG 598 (720)
Q Consensus 519 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~ 598 (720)
|+++|+|.+++.. ...+++.....++.+++.||.|||.. +|+||||||+|||++.++++||+|||+++.+...
T Consensus 82 ~~~gg~L~~~l~~----~~~~~e~~~~~~~~qi~~aL~~LH~~---givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~ 154 (381)
T cd05626 82 YIPGGDMMSLLIR----MEVFPEVLARFYIAELTLAIESVHKM---GFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWT 154 (381)
T ss_pred cCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCcHHHEEECCCCCEEEeeCcCCcccccc
Confidence 9999999999853 34578888889999999999999987 9999999999999999999999999998643110
Q ss_pred CCc---------------------------------------------ccccCccccccCCCCccC-CCCCCCccchHhH
Q 004994 599 STN---------------------------------------------ELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSL 632 (720)
Q Consensus 599 ~~~---------------------------------------------~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~ 632 (720)
... .......||..|+|||.+ ...++.++|||||
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSl 234 (381)
T cd05626 155 HNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSV 234 (381)
T ss_pred cccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeeh
Confidence 000 001124688999999998 4568999999999
Q ss_pred HHHHHHHHhCCCCCCCCCCcccc-chhhhcccccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHH--HhccCCCCCCCH
Q 004994 633 GVVMLELLTGRKPYDRSRPRGEQ-SLVRWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISR--CVQWEPGFRPPM 709 (720)
Q Consensus 633 Gvvl~elltG~~Pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~--cl~~dP~~RPt~ 709 (720)
||++|||+||+.||......... .+..|.. ..... .......++.+++.+ |+..+|..||++
T Consensus 235 G~il~elltG~~Pf~~~~~~~~~~~i~~~~~-------------~~~~~--~~~~~s~~~~dli~~ll~~~~~~~~R~~~ 299 (381)
T cd05626 235 GVILFEMLVGQPPFLAPTPTETQLKVINWEN-------------TLHIP--PQVKLSPEAVDLITKLCCSAEERLGRNGA 299 (381)
T ss_pred hhHHHHHHhCCCCCcCCCHHHHHHHHHcccc-------------ccCCC--CCCCCCHHHHHHHHHHccCcccccCCCCH
Confidence 99999999999999754332111 1111100 00000 001123567788988 555666679999
Q ss_pred HHHHHH
Q 004994 710 SEIVQD 715 (720)
Q Consensus 710 ~evl~~ 715 (720)
+|++++
T Consensus 300 ~~~l~h 305 (381)
T cd05626 300 DDIKAH 305 (381)
T ss_pred HHHhcC
Confidence 999875
No 120
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=3.4e-37 Score=329.94 Aligned_cols=261 Identities=23% Similarity=0.384 Sum_probs=198.3
Q ss_pred cCCCCCCeeccCCCceEEEEEe------CCCcEEEEEEecccccccccHHHHHHHHHHHHcc-CCCceeEEEeEeccC-C
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL------PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRL-RHGNIVELIGYCNEH-G 511 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~------~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~-~ 511 (720)
++|...+.||+|+||+||+|.. .+++.||||+++.... ......+.+|++++.++ +|+||++++++|... .
T Consensus 7 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 85 (343)
T cd05103 7 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT-HSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 85 (343)
T ss_pred hHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCC-hHHHHHHHHHHHHHHhccCCccHhhhcceeecCCC
Confidence 4688899999999999999953 3578999999975432 23345788999999999 689999999988654 4
Q ss_pred eEEEEEeeCCCCCHHHHhhccch---------------------------------------------------------
Q 004994 512 QHLLVYDYGGNCTLHDLLHSDEE--------------------------------------------------------- 534 (720)
Q Consensus 512 ~~~lv~e~~~~gsL~~~l~~~~~--------------------------------------------------------- 534 (720)
..++||||+++|+|.++++....
T Consensus 86 ~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (343)
T cd05103 86 PLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEE 165 (343)
T ss_pred ceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhh
Confidence 67899999999999999864210
Q ss_pred ------hccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCCCcccccCcc
Q 004994 535 ------AHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLL 608 (720)
Q Consensus 535 ------~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~ 608 (720)
....+++....+++.++++||+|||+. +|+||||||+|||++.++++||+|||+++.+.............
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~ 242 (343)
T cd05103 166 AEQEDLYKKVLTLEDLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDAR 242 (343)
T ss_pred hhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCC
Confidence 013468888999999999999999987 99999999999999999999999999998653322211122233
Q ss_pred ccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcccccCchhhhhhhcCCCCCchhhHH
Q 004994 609 TAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDGAYLAK 686 (720)
Q Consensus 609 ~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 686 (720)
++..|+|||.. ...++.++|||||||++|||++ |..||........ +.... ... ..... +..
T Consensus 243 ~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~--~~~~~----~~~------~~~~~----~~~ 306 (343)
T cd05103 243 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE--FCRRL----KEG------TRMRA----PDY 306 (343)
T ss_pred CCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHH--HHHHH----hcc------CCCCC----CCC
Confidence 45679999987 5678999999999999999997 9999965322110 00000 000 00000 111
Q ss_pred HHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhC
Q 004994 687 SLSRFADIISRCVQWEPGFRPPMSEIVQDLLCMI 720 (720)
Q Consensus 687 ~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~ 720 (720)
..+++.+++.+||+.||++|||+.||+++|+.++
T Consensus 307 ~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~ 340 (343)
T cd05103 307 TTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 340 (343)
T ss_pred CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 2346889999999999999999999999999874
No 121
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=7.6e-37 Score=317.74 Aligned_cols=255 Identities=25% Similarity=0.355 Sum_probs=198.0
Q ss_pred cCCCCCCeeccCCCceEEEEEe-CCCc----EEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL-PGGK----LLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHL 514 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~----~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~ 514 (720)
++|...+.||+|+||+||+|.+ .+|+ .||+|.++... .....+++.+|+.+++.++|+||+++++++... ..+
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~ 84 (279)
T cd05109 7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENT-SPKANKEILDEAYVMAGVGSPYVCRLLGICLTS-TVQ 84 (279)
T ss_pred hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCC-CHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCC-CcE
Confidence 4677889999999999999964 4454 48999987543 233456788999999999999999999999754 578
Q ss_pred EEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCC
Q 004994 515 LVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPL 594 (720)
Q Consensus 515 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~ 594 (720)
++|||+++|+|.++++.. ...+++.....++.|+++||+|||+. +|+||||||+|||+++++.+||+|||+++.
T Consensus 85 l~~~~~~~g~l~~~l~~~---~~~~~~~~~~~~~~qi~~~L~~lH~~---~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~ 158 (279)
T cd05109 85 LVTQLMPYGCLLDYVREN---KDRIGSQDLLNWCVQIAKGMSYLEEV---RLVHRDLAARNVLVKSPNHVKITDFGLARL 158 (279)
T ss_pred EEEEcCCCCCHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEEcCCCcEEECCCCceee
Confidence 999999999999998642 34688999999999999999999987 899999999999999999999999999987
Q ss_pred CCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcccccCchhhhh
Q 004994 595 LFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALS 672 (720)
Q Consensus 595 ~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (720)
+.............++..|++||.. .+.++.++|||||||++|||+| |+.||........ ..+..
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~---~~~~~---------- 225 (279)
T cd05109 159 LDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREI---PDLLE---------- 225 (279)
T ss_pred cccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHH---HHHHH----------
Confidence 6433222112222345679999987 5578999999999999999998 9999865332111 11000
Q ss_pred hhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 673 RMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 673 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
...... .+...+..+.+++.+||+.||++||++.|+++.|+++
T Consensus 226 ~~~~~~----~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~ 268 (279)
T cd05109 226 KGERLP----QPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRM 268 (279)
T ss_pred CCCcCC----CCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHh
Confidence 000000 0112335688999999999999999999999999875
No 122
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=3.1e-37 Score=327.72 Aligned_cols=246 Identities=24% Similarity=0.316 Sum_probs=190.3
Q ss_pred CCCCCeeccCCCceEEEEEe-CCCcEEEEEEeccccc-ccccHHHHHHHHHH---HHccCCCceeEEEeEeccCCeEEEE
Q 004994 442 FSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVS-QRQTDEEFLELAST---ISRLRHGNIVELIGYCNEHGQHLLV 516 (720)
Q Consensus 442 ~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~~~e~~~---l~~l~H~niv~l~~~~~~~~~~~lv 516 (720)
|...+.||+|+||.||+|.. .+|+.||||++++... .....+.+.+|.++ ++.++||||+++++++.+.+..++|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 45678999999999999965 5689999999975421 12233455666554 4567899999999999999999999
Q ss_pred EeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCC
Q 004994 517 YDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLF 596 (720)
Q Consensus 517 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~ 596 (720)
|||+++++|...++. ..+++.....++.+++.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 81 ~E~~~~~~L~~~~~~-----~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~ 152 (324)
T cd05589 81 MEYAAGGDLMMHIHT-----DVFSEPRAVFYAACVVLGLQYLHEN---KIVYRDLKLDNLLLDTEGFVKIADFGLCKEGM 152 (324)
T ss_pred EcCCCCCcHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCcEEeCcccCCccCC
Confidence 999999999987742 3589999999999999999999987 99999999999999999999999999987542
Q ss_pred CCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhc
Q 004994 597 SGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMV 675 (720)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (720)
... .......++..|+|||.. ...++.++|||||||++|||++|+.||......... ..+.
T Consensus 153 ~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~----------------~~i~ 214 (324)
T cd05589 153 GFG--DRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVF----------------DSIV 214 (324)
T ss_pred CCC--CcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHH----------------HHHH
Confidence 211 122335678899999998 456899999999999999999999999754321111 0010
Q ss_pred CCCCCchhhHHHHHHHHHHHHHHhccCCCCCC-----CHHHHHHH
Q 004994 676 DPSLDGAYLAKSLSRFADIISRCVQWEPGFRP-----PMSEIVQD 715 (720)
Q Consensus 676 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~evl~~ 715 (720)
.... .++...+..+.+++.+||+.||++|| ++.+++++
T Consensus 215 ~~~~--~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~ 257 (324)
T cd05589 215 NDEV--RYPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQ 257 (324)
T ss_pred hCCC--CCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhC
Confidence 0000 01112345678999999999999999 57777654
No 123
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=4.9e-37 Score=318.67 Aligned_cols=259 Identities=23% Similarity=0.355 Sum_probs=202.4
Q ss_pred hcCCCCCCeeccCCCceEEEEEeC------CCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCe
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAELP------GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQ 512 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~ 512 (720)
.++|...+.||+|+||.||+|... .+..||+|.+.... .......+.+|+.+++.++|+||+++++++...+.
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~ 83 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENA-SMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQP 83 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCcc-CHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCC
Confidence 356778899999999999999653 24689999986442 22334678899999999999999999999999999
Q ss_pred EEEEEeeCCCCCHHHHhhccch------hccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEE
Q 004994 513 HLLVYDYGGNCTLHDLLHSDEE------AHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRV 586 (720)
Q Consensus 513 ~~lv~e~~~~gsL~~~l~~~~~------~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl 586 (720)
.++||||+++|+|.+++..... ....++|..+..++.+++.||.|||+. +++||||||+||+++.++.+||
T Consensus 84 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~di~p~nill~~~~~~kl 160 (277)
T cd05032 84 TLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAK---KFVHRDLAARNCMVAEDLTVKI 160 (277)
T ss_pred cEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccChheEEEcCCCCEEE
Confidence 9999999999999999864321 123478899999999999999999987 8999999999999999999999
Q ss_pred ccccCCCCCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcccc
Q 004994 587 SDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPR 664 (720)
Q Consensus 587 ~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~ 664 (720)
+|||+++.+.............++..|+|||.. .+.++.++|||||||++||++| |+.||........ .+..
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~---~~~~--- 234 (277)
T cd05032 161 GDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEV---LKFV--- 234 (277)
T ss_pred CCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHHH---HHHH---
Confidence 999999866443222222233456789999987 5678999999999999999998 9999965332111 1110
Q ss_pred cCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q 004994 665 LHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLC 718 (720)
Q Consensus 665 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 718 (720)
.... ....+...+.++.+++.+||+.+|++|||+.|+++.|++
T Consensus 235 ----------~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 277 (277)
T cd05032 235 ----------IDGG-HLDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLKD 277 (277)
T ss_pred ----------hcCC-CCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhcC
Confidence 0000 000111234678899999999999999999999999874
No 124
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=5.9e-37 Score=321.45 Aligned_cols=265 Identities=23% Similarity=0.359 Sum_probs=200.1
Q ss_pred cCCCCCCeeccCCCceEEEEEeC-----------------CCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAELP-----------------GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVE 502 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~~-----------------~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~ 502 (720)
++|+..+.||+|+||.||++... ++..||+|++.... .......|.+|++++++++|+||++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~~~E~~~l~~l~~~~i~~ 83 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDA-NKNARNDFLKEIKIMSRLKDPNIIR 83 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCCcce
Confidence 46888899999999999998432 23468999987542 2334568899999999999999999
Q ss_pred EEeEeccCCeEEEEEeeCCCCCHHHHhhccch-------hccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCC
Q 004994 503 LIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEE-------AHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSN 575 (720)
Q Consensus 503 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~-------~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~N 575 (720)
+++++...+..++||||+++++|.+++..... ....+++.....++.+++.||+|||+. +++||||||+|
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dlkp~N 160 (296)
T cd05095 84 LLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSL---NFVHRDLATRN 160 (296)
T ss_pred EEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CeecccCChhe
Confidence 99999999999999999999999999865321 123478889999999999999999987 89999999999
Q ss_pred eEEcCCCCeEEccccCCCCCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh--CCCCCCCCCCc
Q 004994 576 ILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT--GRKPYDRSRPR 652 (720)
Q Consensus 576 iLl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt--G~~Pf~~~~~~ 652 (720)
||+++++.+||+|||+++.+.............++..|++||.. .+.++.++|||||||++|||+| |..||......
T Consensus 161 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~ 240 (296)
T cd05095 161 CLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDE 240 (296)
T ss_pred EEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChH
Confidence 99999999999999999866433222222223345678999976 6679999999999999999998 77888643221
Q ss_pred cccchhhhcccccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q 004994 653 GEQSLVRWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLC 718 (720)
Q Consensus 653 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 718 (720)
.. +........... .....+ .+..++..+.+++.+||+.||++||++.||++.|++
T Consensus 241 ~~---~~~~~~~~~~~~--~~~~~~-----~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 296 (296)
T cd05095 241 QV---IENTGEFFRDQG--RQVYLP-----KPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLLE 296 (296)
T ss_pred HH---HHHHHHHHhhcc--ccccCC-----CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 11 110000000000 000000 011234678899999999999999999999999874
No 125
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=1.1e-36 Score=313.46 Aligned_cols=253 Identities=26% Similarity=0.400 Sum_probs=200.4
Q ss_pred cCCCCCCeeccCCCceEEEEEeCCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEee
Q 004994 440 NSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDY 519 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 519 (720)
++|...+.||+|+||.||+|...+...||+|.++... ...+.|.+|++++++++|+||+++++++.+ +..++||||
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~e~ 81 (262)
T cd05071 6 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT---MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEY 81 (262)
T ss_pred HHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCc---cCHHHHHHHHHHHHhCCCCCcceEEEEECC-CCcEEEEEc
Confidence 4688889999999999999987776789999997532 234678999999999999999999998754 457999999
Q ss_pred CCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCC
Q 004994 520 GGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGS 599 (720)
Q Consensus 520 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~ 599 (720)
+++|+|.+++... ....+++..+..++.++++||+|||+. +++||||||+||++++++.+||+|||.++.+....
T Consensus 82 ~~~~~L~~~~~~~--~~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~ 156 (262)
T cd05071 82 MSKGSLLDFLKGE--MGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 156 (262)
T ss_pred CCCCcHHHHHhhc--cccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcccEEEcCCCcEEeccCCceeeccccc
Confidence 9999999999642 134578999999999999999999987 89999999999999999999999999997664332
Q ss_pred CcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcccccCchhhhhhhcCC
Q 004994 600 TNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDP 677 (720)
Q Consensus 600 ~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (720)
.. ......++..|++||+. .+.++.++|||||||++|||+| |+.||........... +..
T Consensus 157 ~~-~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~----------------~~~- 218 (262)
T cd05071 157 YT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQ----------------VER- 218 (262)
T ss_pred cc-cccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHH----------------Hhc-
Confidence 11 11223456679999987 5678999999999999999999 8889865432111100 000
Q ss_pred CCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 678 SLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 678 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
..........+..+.+++.+|++.||++||+++++++.|++.
T Consensus 219 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 219 GYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred CCCCCCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence 000001123446788999999999999999999999999875
No 126
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=3.9e-37 Score=333.98 Aligned_cols=260 Identities=18% Similarity=0.208 Sum_probs=194.4
Q ss_pred hcCCCCCCeeccCCCceEEEEE-eCCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEE
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAE-LPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVY 517 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 517 (720)
.+.|+..+.||+|+||.||+|. ..+++.||+|.... ..+.+|++++++++|||||++++++......++|+
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~--------~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~ 162 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR--------GGTATEAHILRAINHPSIIQLKGTFTYNKFTCLIL 162 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh--------hhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEE
Confidence 3579999999999999999995 46789999997532 34678999999999999999999999999999999
Q ss_pred eeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCC
Q 004994 518 DYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFS 597 (720)
Q Consensus 518 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~ 597 (720)
||+. ++|.+++.. ...+++.....++.|+++||.|||+. +||||||||+|||++.++.+||+|||+|+....
T Consensus 163 e~~~-~~L~~~l~~----~~~l~~~~~~~i~~qi~~aL~ylH~~---~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~ 234 (391)
T PHA03212 163 PRYK-TDLYCYLAA----KRNIAICDILAIERSVLRAIQYLHEN---RIIHRDIKAENIFINHPGDVCLGDFGAACFPVD 234 (391)
T ss_pred ecCC-CCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHhEEEcCCCCEEEEeCCccccccc
Confidence 9986 588887743 34578899999999999999999987 999999999999999999999999999975432
Q ss_pred CCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCcccc----c----hhhhccc---cc
Q 004994 598 GSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQ----S----LVRWAIP---RL 665 (720)
Q Consensus 598 ~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~----~----~~~~~~~---~~ 665 (720)
.. ........+|+.|+|||++ ...++.++|||||||++|||+||+.||......... . ++..... ..
T Consensus 235 ~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~ 313 (391)
T PHA03212 235 IN-ANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEF 313 (391)
T ss_pred cc-ccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhc
Confidence 21 1122345689999999998 557899999999999999999999887543211100 0 0000000 00
Q ss_pred C--chhhhhhhc---------CCCCC--chhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 666 H--DIDALSRMV---------DPSLD--GAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 666 ~--~~~~~~~~~---------~~~~~--~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
. ....+.... .+... .......+.++.+++.+||+.||++|||++|++++
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~h 376 (391)
T PHA03212 314 PIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDF 376 (391)
T ss_pred CcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 0 000000000 00000 01112345678899999999999999999999864
No 127
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=3e-37 Score=321.80 Aligned_cols=253 Identities=23% Similarity=0.323 Sum_probs=198.9
Q ss_pred CCCCCCeeccCCCceEEEEEe-CCCcEEEEEEeccccc-ccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEe
Q 004994 441 SFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVS-QRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYD 518 (720)
Q Consensus 441 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 518 (720)
.|+..++||+|+||+||++.. .+++.||+|++..... .......+.+|++++++++||||+++++++.+.+..++|||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 366778999999999999965 5789999999975322 22234567889999999999999999999999999999999
Q ss_pred eCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCC
Q 004994 519 YGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSG 598 (720)
Q Consensus 519 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~ 598 (720)
|+++|+|.+++... ....+++.....++.|++.||.|||+. +|+||||||+||++++++.++|+|||+++.....
T Consensus 81 ~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~ 155 (285)
T cd05605 81 LMNGGDLKFHIYNM--GNPGFDEERAVFYAAEITCGLEDLHRE---RIVYRDLKPENILLDDYGHIRISDLGLAVEIPEG 155 (285)
T ss_pred ccCCCcHHHHHHhc--CcCCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHEEECCCCCEEEeeCCCceecCCC
Confidence 99999999887532 234688999999999999999999987 8999999999999999999999999999865322
Q ss_pred CCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcCC
Q 004994 599 STNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDP 677 (720)
Q Consensus 599 ~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (720)
. ......++..|+|||.. ...++.++|||||||++|||++|+.||.......... .+...+..
T Consensus 156 ~---~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~-------------~~~~~~~~ 219 (285)
T cd05605 156 E---TIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKRE-------------EVERRVKE 219 (285)
T ss_pred C---ccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHH-------------HHHHHhhh
Confidence 2 11234578899999998 5578999999999999999999999997533211100 00000100
Q ss_pred CCCchhhHHHHHHHHHHHHHHhccCCCCCC-----CHHHHHHH
Q 004994 678 SLDGAYLAKSLSRFADIISRCVQWEPGFRP-----PMSEIVQD 715 (720)
Q Consensus 678 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~evl~~ 715 (720)
....++...+..+.+++.+||+.||++|| ++++++++
T Consensus 220 -~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05605 220 -DQEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAH 261 (285)
T ss_pred -cccccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence 00112223456788999999999999999 88898764
No 128
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=1.3e-36 Score=312.95 Aligned_cols=253 Identities=19% Similarity=0.290 Sum_probs=199.1
Q ss_pred cCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccc---cccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQ---RQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLL 515 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~---~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~l 515 (720)
++|...+.||+|++|.||+|.. .+++.||+|.+...... ......+.+|++++++++||||+++++++.+.+..++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 4688899999999999999964 57899999998643221 1233568899999999999999999999999999999
Q ss_pred EEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCC
Q 004994 516 VYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLL 595 (720)
Q Consensus 516 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~ 595 (720)
||||+++++|.+++.. ...+++....+++.+++.||+|||+. +|+||||||+||++++++.+||+|||+++..
T Consensus 82 v~e~~~~~~l~~~~~~----~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~ 154 (263)
T cd06625 82 FMEYMPGGSVKDQLKA----YGALTETVTRKYTRQILEGVEYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKRL 154 (263)
T ss_pred EEEECCCCcHHHHHHH----hCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceec
Confidence 9999999999998853 34578888899999999999999987 9999999999999999999999999999765
Q ss_pred CCCCCccc-ccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhh
Q 004994 596 FSGSTNEL-SEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSR 673 (720)
Q Consensus 596 ~~~~~~~~-~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (720)
........ .....++..|+|||.. ...++.++||||||+++|||++|+.||......... ..
T Consensus 155 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~----------------~~ 218 (263)
T cd06625 155 QTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAI----------------FK 218 (263)
T ss_pred cccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHH----------------HH
Confidence 33211111 1224467789999998 456899999999999999999999999653221110 00
Q ss_pred hcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 674 MVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 674 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
..........+......+.+++.+||..+|.+|||+.|++++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 219 IATQPTNPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred HhccCCCCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 001111111122334567899999999999999999999876
No 129
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=3.5e-37 Score=325.99 Aligned_cols=242 Identities=21% Similarity=0.278 Sum_probs=187.1
Q ss_pred CeeccCCCceEEEEEe-CCCcEEEEEEeccccc-ccccHHHHHHHHHHHHc-cCCCceeEEEeEeccCCeEEEEEeeCCC
Q 004994 446 NFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVS-QRQTDEEFLELASTISR-LRHGNIVELIGYCNEHGQHLLVYDYGGN 522 (720)
Q Consensus 446 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~~~e~~~l~~-l~H~niv~l~~~~~~~~~~~lv~e~~~~ 522 (720)
++||+|+||+||+|.. .+++.||||+++.... .....+.+..|.+++.. .+||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 4699999999999965 4688999999975432 12333455566666664 4899999999999999999999999999
Q ss_pred CCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCCCcc
Q 004994 523 CTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNE 602 (720)
Q Consensus 523 gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~~ 602 (720)
|+|.+++.. ...+++.....++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++...... .
T Consensus 81 g~L~~~~~~----~~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~--~ 151 (316)
T cd05592 81 GDLMFHIQS----SGRFDEARARFYAAEIICGLQFLHKK---GIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE--G 151 (316)
T ss_pred CcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC--C
Confidence 999988853 34578888999999999999999987 99999999999999999999999999997543222 2
Q ss_pred cccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcCCCCCc
Q 004994 603 LSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDG 681 (720)
Q Consensus 603 ~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 681 (720)
......++..|+|||.+ ...++.++|||||||++|||++|+.||...........+.. ..+.
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~--------------~~~~--- 214 (316)
T cd05592 152 KASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILN--------------DRPH--- 214 (316)
T ss_pred ccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHc--------------CCCC---
Confidence 22345688999999998 45689999999999999999999999975432111100000 0011
Q ss_pred hhhHHHHHHHHHHHHHHhccCCCCCCCHH-HHHH
Q 004994 682 AYLAKSLSRFADIISRCVQWEPGFRPPMS-EIVQ 714 (720)
Q Consensus 682 ~~~~~~~~~l~~l~~~cl~~dP~~RPt~~-evl~ 714 (720)
.+.....++.+++.+||+.||++||++. ++++
T Consensus 215 -~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~ 247 (316)
T cd05592 215 -FPRWISKEAKDCLSKLFERDPTKRLGVDGDIRQ 247 (316)
T ss_pred -CCCCCCHHHHHHHHHHccCCHHHcCCChHHHHc
Confidence 1112235678999999999999999875 5544
No 130
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3e-37 Score=310.36 Aligned_cols=253 Identities=26% Similarity=0.302 Sum_probs=201.7
Q ss_pred CCCCCeeccCCCceEEEEEeCC-CcEEEEEEeccccc-ccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEee
Q 004994 442 FSEGNFIGEGLLGSVYKAELPG-GKLLAVKKLSNTVS-QRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDY 519 (720)
Q Consensus 442 ~~~~~~lg~G~~g~Vy~~~~~~-g~~vavK~l~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 519 (720)
|+..+.||.|.-|+||.++..+ +..+|+|++.+... .+........|-+||+.++||.++.||+.++.....++||||
T Consensus 79 f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~mey 158 (459)
T KOG0610|consen 79 FRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVMEY 158 (459)
T ss_pred HHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEEec
Confidence 3445789999999999998754 68999999976533 244456678889999999999999999999999999999999
Q ss_pred CCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCC--
Q 004994 520 GGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFS-- 597 (720)
Q Consensus 520 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~-- 597 (720)
|+||+|+.+.+. +..+.|+.....-++..|.-||+|||.. |||+|||||+|||+.++|++.|+||.++.....
T Consensus 159 CpGGdL~~Lrqk--Qp~~~fse~~aRFYaAEvl~ALEYLHml---GivYRDLKPENILvredGHIMLsDFDLS~~~~~~P 233 (459)
T KOG0610|consen 159 CPGGDLHSLRQK--QPGKRFSESAARFYAAEVLLALEYLHML---GIVYRDLKPENILVREDGHIMLSDFDLSLRCPVSP 233 (459)
T ss_pred CCCccHHHHHhh--CCCCccchhhHHHHHHHHHHHHHHHHhh---ceeeccCCcceeEEecCCcEEeeeccccccCCCCC
Confidence 999999998875 3457789998999999999999999998 999999999999999999999999998754311
Q ss_pred -------------------------------CCC---------------------cccccCccccccCCCCccCCC-CCC
Q 004994 598 -------------------------------GST---------------------NELSEGLLTAHGSGAPEFESG-SYS 624 (720)
Q Consensus 598 -------------------------------~~~---------------------~~~~~~~~~~~~~~aPE~~~~-~~~ 624 (720)
... ...+..+.||..|.|||++.| .-+
T Consensus 234 t~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHg 313 (459)
T KOG0610|consen 234 TLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHG 313 (459)
T ss_pred eeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCCC
Confidence 000 011223568899999999965 468
Q ss_pred CccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCC
Q 004994 625 CQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPG 704 (720)
Q Consensus 625 ~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~ 704 (720)
.++|+|+|||++|||+.|+.||.+.+..+ .+..++-..+........+..+.|||++.|.+||.
T Consensus 314 sAVDWWtfGIflYEmLyG~TPFKG~~~~~----------------Tl~NIv~~~l~Fp~~~~vs~~akDLIr~LLvKdP~ 377 (459)
T KOG0610|consen 314 SAVDWWTFGIFLYEMLYGTTPFKGSNNKE----------------TLRNIVGQPLKFPEEPEVSSAAKDLIRKLLVKDPS 377 (459)
T ss_pred chhhHHHHHHHHHHHHhCCCCcCCCCchh----------------hHHHHhcCCCcCCCCCcchhHHHHHHHHHhccChh
Confidence 89999999999999999999998765433 22233322222211224556789999999999999
Q ss_pred CCCC----HHHHHHH
Q 004994 705 FRPP----MSEIVQD 715 (720)
Q Consensus 705 ~RPt----~~evl~~ 715 (720)
+|.. +.||-+|
T Consensus 378 kRlg~~rGA~eIK~H 392 (459)
T KOG0610|consen 378 KRLGSKRGAAEIKRH 392 (459)
T ss_pred hhhccccchHHhhcC
Confidence 9987 7777553
No 131
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=1.2e-36 Score=312.78 Aligned_cols=252 Identities=25% Similarity=0.402 Sum_probs=199.7
Q ss_pred cCCCCCCeeccCCCceEEEEEeCCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEee
Q 004994 440 NSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDY 519 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 519 (720)
++|...+.||+|+||.||+|...++..||+|.+.... ...+.|.+|++++++++|+|++++++++.+ +..+++|||
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~e~ 81 (260)
T cd05070 6 ESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGT---MSPESFLEEAQIMKKLRHDKLVQLYAVVSE-EPIYIVTEY 81 (260)
T ss_pred HHhhhhheeccccCceEEEEEecCCceeEEEEecCCC---CCHHHHHHHHHHHHhcCCCceEEEEeEECC-CCcEEEEEe
Confidence 4677889999999999999988888889999987542 234678999999999999999999998854 568899999
Q ss_pred CCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCC
Q 004994 520 GGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGS 599 (720)
Q Consensus 520 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~ 599 (720)
+++++|.++++.. ....+++..+..++.+++.||+|||+. +++||||||+||++++++.+||+|||++..+....
T Consensus 82 ~~~~~L~~~~~~~--~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~ 156 (260)
T cd05070 82 MSKGSLLDFLKDG--EGRALKLPNLVDMAAQVAAGMAYIERM---NYIHRDLRSANILVGDGLVCKIADFGLARLIEDNE 156 (260)
T ss_pred cCCCcHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEEeCCceEEeCCceeeeeccCcc
Confidence 9999999998643 234578999999999999999999987 89999999999999999999999999997664322
Q ss_pred CcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcccccCchhhhhhhcCC
Q 004994 600 TNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDP 677 (720)
Q Consensus 600 ~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (720)
.. ......++..|+|||.. ...++.++||||||+++|||++ |+.||........ ... +. .
T Consensus 157 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~---~~~-------------~~-~ 218 (260)
T cd05070 157 YT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREV---LEQ-------------VE-R 218 (260)
T ss_pred cc-cccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHH---HHH-------------HH-c
Confidence 11 11122345679999987 5578999999999999999999 8999965332111 110 00 0
Q ss_pred CCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q 004994 678 SLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLC 718 (720)
Q Consensus 678 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 718 (720)
......+...+..+.+++.+|+..+|++|||++++.+.|++
T Consensus 219 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 219 GYRMPCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred CCCCCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 00001112234578899999999999999999999999886
No 132
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=3e-37 Score=327.10 Aligned_cols=243 Identities=21% Similarity=0.287 Sum_probs=190.3
Q ss_pred CeeccCCCceEEEEEe-CCCcEEEEEEeccccc-ccccHHHHHHHHHHHHcc-CCCceeEEEeEeccCCeEEEEEeeCCC
Q 004994 446 NFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVS-QRQTDEEFLELASTISRL-RHGNIVELIGYCNEHGQHLLVYDYGGN 522 (720)
Q Consensus 446 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv~e~~~~ 522 (720)
+.||+|+||+||+|.. .+++.||||++.+... .....+.+..|.+++..+ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 4699999999999965 4689999999975422 223445677888888776 699999999999999999999999999
Q ss_pred CCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCCCcc
Q 004994 523 CTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNE 602 (720)
Q Consensus 523 gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~~ 602 (720)
|+|.+++.. ...+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...... .
T Consensus 81 g~L~~~i~~----~~~l~~~~~~~~~~ql~~~L~~lH~~---~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~--~ 151 (320)
T cd05590 81 GDLMFHIQK----SRRFDEARARFYAAEITSALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNG--K 151 (320)
T ss_pred chHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCC--C
Confidence 999988853 34588889999999999999999987 89999999999999999999999999987542211 1
Q ss_pred cccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcCCCCCc
Q 004994 603 LSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDG 681 (720)
Q Consensus 603 ~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 681 (720)
......++..|+|||.+ ...++.++|||||||++|||++|+.||........ .. .+.....
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~---~~-------------~i~~~~~-- 213 (320)
T cd05590 152 TTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDL---FE-------------AILNDEV-- 213 (320)
T ss_pred cccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHH---HH-------------HHhcCCC--
Confidence 22335688999999998 45689999999999999999999999975432111 11 0110000
Q ss_pred hhhHHHHHHHHHHHHHHhccCCCCCCCH------HHHHHH
Q 004994 682 AYLAKSLSRFADIISRCVQWEPGFRPPM------SEIVQD 715 (720)
Q Consensus 682 ~~~~~~~~~l~~l~~~cl~~dP~~RPt~------~evl~~ 715 (720)
..+.....++.+++.+||+.||++||++ ++++++
T Consensus 214 ~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h 253 (320)
T cd05590 214 VYPTWLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRH 253 (320)
T ss_pred CCCCCCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcC
Confidence 0111223567899999999999999998 666543
No 133
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=1.6e-36 Score=313.58 Aligned_cols=255 Identities=25% Similarity=0.352 Sum_probs=191.5
Q ss_pred CeeccCCCceEEEEEeCC---CcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEeeCCC
Q 004994 446 NFIGEGLLGSVYKAELPG---GKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDYGGN 522 (720)
Q Consensus 446 ~~lg~G~~g~Vy~~~~~~---g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 522 (720)
+.||+|+||.||+|...+ +..+|+|.++.... ......+.+|+.++++++||||+++++++.+....++||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 79 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSAS-VQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPL 79 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCC-hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCC
Confidence 358999999999996543 45799999875432 23345788999999999999999999999998999999999999
Q ss_pred CCHHHHhhccch-hccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCCCc
Q 004994 523 CTLHDLLHSDEE-AHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTN 601 (720)
Q Consensus 523 gsL~~~l~~~~~-~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~ 601 (720)
|+|.+++..... .....++.....++.|+++||+|||+. +++||||||+||+++.++++||+|||+++........
T Consensus 80 g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~ 156 (269)
T cd05087 80 GDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKN---NFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYY 156 (269)
T ss_pred CcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEECCccccccccCccee
Confidence 999999864322 123456778889999999999999987 8999999999999999999999999999765333222
Q ss_pred ccccCccccccCCCCccCCC--------CCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcccccCchhhhh
Q 004994 602 ELSEGLLTAHGSGAPEFESG--------SYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALS 672 (720)
Q Consensus 602 ~~~~~~~~~~~~~aPE~~~~--------~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (720)
.......++..|+|||+..+ .++.++|||||||++|||++ |+.||.......... .... ....
T Consensus 157 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~---~~~~-----~~~~ 228 (269)
T cd05087 157 VTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLT---YTVR-----EQQL 228 (269)
T ss_pred ecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHH---HHhh-----cccC
Confidence 22233445678999998742 35789999999999999996 999996543221110 0000 0001
Q ss_pred hhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 004994 673 RMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLL 717 (720)
Q Consensus 673 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 717 (720)
+..++.+.. .....+.+++.+|+ .+|++|||++||++.|+
T Consensus 229 ~~~~~~~~~----~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 229 KLPKPRLKL----PLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred CCCCCccCC----CCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 111122111 12345778999999 68999999999999875
No 134
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=5.8e-37 Score=322.53 Aligned_cols=257 Identities=24% Similarity=0.348 Sum_probs=197.3
Q ss_pred cCCCCCCeeccCCCceEEEEEeC-CCc--EEEEEEecccccccccHHHHHHHHHHHHcc-CCCceeEEEeEeccCCeEEE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAELP-GGK--LLAVKKLSNTVSQRQTDEEFLELASTISRL-RHGNIVELIGYCNEHGQHLL 515 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~--~vavK~l~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~l 515 (720)
++|+..+.||+|+||.||+|... ++. .+|+|.+.... .....+.+.+|++++.++ +|+||+++++++.+.+..++
T Consensus 7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~l 85 (303)
T cd05088 7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA-SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL 85 (303)
T ss_pred hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccC-CHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceE
Confidence 46778899999999999999753 454 45777775432 234456788999999999 89999999999999999999
Q ss_pred EEeeCCCCCHHHHhhccch------------hccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCC
Q 004994 516 VYDYGGNCTLHDLLHSDEE------------AHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLI 583 (720)
Q Consensus 516 v~e~~~~gsL~~~l~~~~~------------~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~ 583 (720)
||||+++++|.++++.... ....+++..+..++.|+++||+|||+. +++||||||+|||+++++.
T Consensus 86 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dlkp~Nili~~~~~ 162 (303)
T cd05088 86 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYV 162 (303)
T ss_pred EEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEecCCCc
Confidence 9999999999999864321 123578999999999999999999987 9999999999999999999
Q ss_pred eEEccccCCCCCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhc
Q 004994 584 VRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWA 661 (720)
Q Consensus 584 ~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~ 661 (720)
+||+|||+++...... .......+..|+|||+. ...++.++|||||||++|||+| |..||........ ...
T Consensus 163 ~kl~dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~---~~~- 235 (303)
T cd05088 163 AKIADFGLSRGQEVYV---KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAEL---YEK- 235 (303)
T ss_pred EEeCccccCcccchhh---hcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHHH---HHH-
Confidence 9999999986432111 11111234579999987 4568899999999999999998 9999964332111 100
Q ss_pred ccccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhC
Q 004994 662 IPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCMI 720 (720)
Q Consensus 662 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~ 720 (720)
+ ........+...+.++.+++.+||+.+|++||+++++++.|++++
T Consensus 236 ------------~-~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~ 281 (303)
T cd05088 236 ------------L-PQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 281 (303)
T ss_pred ------------H-hcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 0 000000011122356889999999999999999999999998763
No 135
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=8.1e-37 Score=319.07 Aligned_cols=259 Identities=25% Similarity=0.380 Sum_probs=201.2
Q ss_pred hcCCCCCCeeccCCCceEEEEEeC------CCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCe
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAELP------GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQ 512 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~ 512 (720)
.++|+..+.||+|+||.||+|... ++..||+|.+..... .....+|.+|++++++++||||+++++++.+.+.
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~ 82 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEAS-ADMQADFQREAALMAEFDHPNIVKLLGVCAVGKP 82 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcC-HHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCc
Confidence 457888899999999999999753 467899999875432 2344678999999999999999999999999999
Q ss_pred EEEEEeeCCCCCHHHHhhccc------------------hhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCC
Q 004994 513 HLLVYDYGGNCTLHDLLHSDE------------------EAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSS 574 (720)
Q Consensus 513 ~~lv~e~~~~gsL~~~l~~~~------------------~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~ 574 (720)
.++||||+++|+|.+++.... .....+++..+..++.+++.||.|||.. +++||||||+
T Consensus 83 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~---~i~H~dl~p~ 159 (288)
T cd05050 83 MCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSER---KFVHRDLATR 159 (288)
T ss_pred cEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CeecccccHh
Confidence 999999999999999986421 1123578889999999999999999987 9999999999
Q ss_pred CeEEcCCCCeEEccccCCCCCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCc
Q 004994 575 NILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPR 652 (720)
Q Consensus 575 NiLl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~ 652 (720)
||++++++.+||+|||++..+..............+..|+|||.. .+.++.++|||||||++|||++ |..||......
T Consensus 160 nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~ 239 (288)
T cd05050 160 NCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHE 239 (288)
T ss_pred heEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH
Confidence 999999999999999998765332211111222335579999987 5678999999999999999998 88888543221
Q ss_pred cccchhhhcccccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q 004994 653 GEQSLVRWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLC 718 (720)
Q Consensus 653 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 718 (720)
. .. ..+.+.... ..+...+.++.+++.+||+.||++|||+.|+++.|++
T Consensus 240 ~---~~-------------~~~~~~~~~-~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 240 E---VI-------------YYVRDGNVL-SCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred H---HH-------------HHHhcCCCC-CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 1 11 111111100 0111234678899999999999999999999999974
No 136
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=3.4e-37 Score=327.02 Aligned_cols=243 Identities=20% Similarity=0.258 Sum_probs=191.2
Q ss_pred CeeccCCCceEEEEEe-CCCcEEEEEEeccccc-ccccHHHHHHHHHHHHcc-CCCceeEEEeEeccCCeEEEEEeeCCC
Q 004994 446 NFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVS-QRQTDEEFLELASTISRL-RHGNIVELIGYCNEHGQHLLVYDYGGN 522 (720)
Q Consensus 446 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv~e~~~~ 522 (720)
++||+|+||+||+|.. .+++.||||++.+... .....+.+..|.+++..+ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 4699999999999965 4688999999975422 223445677888888866 799999999999999999999999999
Q ss_pred CCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCCCcc
Q 004994 523 CTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNE 602 (720)
Q Consensus 523 gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~~ 602 (720)
|+|.+.+.. ...+++.....++.++++||.|||+. +|+||||||+|||++.++.+||+|||+++...... .
T Consensus 81 ~~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~--~ 151 (321)
T cd05591 81 GDLMFQIQR----SRKFDEPRSRFYAAEVTLALMFLHRH---GVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNG--V 151 (321)
T ss_pred CcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeecccceecccCC--c
Confidence 999988853 34688889999999999999999987 89999999999999999999999999987542221 1
Q ss_pred cccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcCCCCCc
Q 004994 603 LSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDG 681 (720)
Q Consensus 603 ~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 681 (720)
......++..|+|||.. ...++.++|||||||++|||+||+.||........ .. .+.....
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~---~~-------------~i~~~~~-- 213 (321)
T cd05591 152 TTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDL---FE-------------SILHDDV-- 213 (321)
T ss_pred cccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHH---HH-------------HHHcCCC--
Confidence 22335678899999988 45789999999999999999999999975432111 10 0110000
Q ss_pred hhhHHHHHHHHHHHHHHhccCCCCCC-------CHHHHHHH
Q 004994 682 AYLAKSLSRFADIISRCVQWEPGFRP-------PMSEIVQD 715 (720)
Q Consensus 682 ~~~~~~~~~l~~l~~~cl~~dP~~RP-------t~~evl~~ 715 (720)
..+.....++.+++.+||+.||++|| ++++++++
T Consensus 214 ~~p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~h 254 (321)
T cd05591 214 LYPVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQH 254 (321)
T ss_pred CCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcC
Confidence 01111235678999999999999999 88888764
No 137
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=2.8e-37 Score=329.40 Aligned_cols=253 Identities=25% Similarity=0.289 Sum_probs=196.2
Q ss_pred CCCCCCeeccCCCceEEEEEe----CCCcEEEEEEeccccc--ccccHHHHHHHHHHHHcc-CCCceeEEEeEeccCCeE
Q 004994 441 SFSEGNFIGEGLLGSVYKAEL----PGGKLLAVKKLSNTVS--QRQTDEEFLELASTISRL-RHGNIVELIGYCNEHGQH 513 (720)
Q Consensus 441 ~~~~~~~lg~G~~g~Vy~~~~----~~g~~vavK~l~~~~~--~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~ 513 (720)
+|+..+.||+|+||+||+++. .+++.||+|++.+... .....+.+..|+++++++ +|+||+++++++.+.+..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 467789999999999999864 3688999999864321 123345678899999999 599999999999999999
Q ss_pred EEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCC
Q 004994 514 LLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAP 593 (720)
Q Consensus 514 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~ 593 (720)
++||||+++|+|.+++.. ...+++.....++.+++.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 81 ~lv~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nili~~~~~~kl~DfG~~~ 153 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQ----RDNFSEDEVRFYSGEIILALEHLHKL---GIVYRDIKLENILLDSEGHVVLTDFGLSK 153 (332)
T ss_pred EEEEeCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHeEECCCCCEEEeeCcCCc
Confidence 999999999999998853 34588899999999999999999987 89999999999999999999999999998
Q ss_pred CCCCCCCcccccCccccccCCCCccCCC--CCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhh
Q 004994 594 LLFSGSTNELSEGLLTAHGSGAPEFESG--SYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDAL 671 (720)
Q Consensus 594 ~~~~~~~~~~~~~~~~~~~~~aPE~~~~--~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (720)
........ ......++..|+|||.+.+ .++.++|||||||++|||+||+.||...........+.. ..
T Consensus 154 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~---------~~ 223 (332)
T cd05614 154 EFLSEEKE-RTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSR---------RI 223 (332)
T ss_pred cccccCCC-ccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHH---------HH
Confidence 65332211 2223568899999999844 478899999999999999999999964332211110000 00
Q ss_pred hhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCC-----CHHHHHHH
Q 004994 672 SRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRP-----PMSEIVQD 715 (720)
Q Consensus 672 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~evl~~ 715 (720)
.. .++.. +...+..+.+++.+||+.||++|| ++++++++
T Consensus 224 ~~-~~~~~----~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 267 (332)
T cd05614 224 LK-CDPPF----PSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEH 267 (332)
T ss_pred hc-CCCCC----CCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcC
Confidence 00 11111 112345678999999999999999 77788764
No 138
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=4.9e-37 Score=324.73 Aligned_cols=242 Identities=24% Similarity=0.303 Sum_probs=188.2
Q ss_pred CeeccCCCceEEEEEe-CCCcEEEEEEeccccc-ccccHHHHHHHHHHHHc-cCCCceeEEEeEeccCCeEEEEEeeCCC
Q 004994 446 NFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVS-QRQTDEEFLELASTISR-LRHGNIVELIGYCNEHGQHLLVYDYGGN 522 (720)
Q Consensus 446 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~~~e~~~l~~-l~H~niv~l~~~~~~~~~~~lv~e~~~~ 522 (720)
+.||+|+||+||+|.. .+++.||||+++.... .....+.+..|..++.. ++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 4699999999999965 4588999999975432 12233456677777775 4999999999999999999999999999
Q ss_pred CCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCCCcc
Q 004994 523 CTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNE 602 (720)
Q Consensus 523 gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~~ 602 (720)
|+|.+++.. ...+++.....++.|+++||.|||+. +|+||||||+|||++.++.+||+|||+++...... .
T Consensus 81 g~L~~~l~~----~~~~~~~~~~~~~~qi~~al~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~ 151 (316)
T cd05619 81 GDLMFHIQS----CHKFDLPRATFYAAEIICGLQFLHSK---GIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGD--A 151 (316)
T ss_pred CcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEccCCcceECCCCC--C
Confidence 999998853 34678889999999999999999987 99999999999999999999999999987532211 1
Q ss_pred cccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcCCCCCc
Q 004994 603 LSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDG 681 (720)
Q Consensus 603 ~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 681 (720)
......++..|+|||.+ ...++.++|||||||++|||++|+.||...........+. ...+..
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~--------------~~~~~~-- 215 (316)
T cd05619 152 KTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIR--------------MDNPCY-- 215 (316)
T ss_pred ceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHH--------------hCCCCC--
Confidence 12235678899999998 4568999999999999999999999997543211111010 001111
Q ss_pred hhhHHHHHHHHHHHHHHhccCCCCCCCHH-HHHH
Q 004994 682 AYLAKSLSRFADIISRCVQWEPGFRPPMS-EIVQ 714 (720)
Q Consensus 682 ~~~~~~~~~l~~l~~~cl~~dP~~RPt~~-evl~ 714 (720)
+.....++.+++.+||+.||++||++. ++.+
T Consensus 216 --~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 247 (316)
T cd05619 216 --PRWLTREAKDILVKLFVREPERRLGVKGDIRQ 247 (316)
T ss_pred --CccCCHHHHHHHHHHhccCHhhcCCChHHHHc
Confidence 111235678999999999999999997 6654
No 139
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=1.6e-37 Score=335.72 Aligned_cols=253 Identities=23% Similarity=0.324 Sum_probs=197.1
Q ss_pred cCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccc-cccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTV-SQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVY 517 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~-~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 517 (720)
++|+..+.||+|+||+||+|.. .+|+.||||++.... ........+.+|+++++.++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 4688889999999999999965 468999999997432 12234456788999999999999999999999999999999
Q ss_pred eeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCC
Q 004994 518 DYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFS 597 (720)
Q Consensus 518 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~ 597 (720)
||+++|+|.+++.. ...+++.....++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++.+..
T Consensus 81 E~~~~g~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 153 (364)
T cd05599 81 EYLPGGDMMTLLMK----KDTFTEEETRFYIAETILAIDSIHKL---GYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKK 153 (364)
T ss_pred CCCCCcHHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEeecccceeccc
Confidence 99999999999853 34588899999999999999999987 899999999999999999999999999876532
Q ss_pred CCCcc------------------------------------cccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHH
Q 004994 598 GSTNE------------------------------------LSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELL 640 (720)
Q Consensus 598 ~~~~~------------------------------------~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ell 640 (720)
..... ......||+.|+|||++ ...++.++|||||||++|||+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~ 233 (364)
T cd05599 154 SHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEML 233 (364)
T ss_pred cccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhh
Confidence 11000 01123588999999998 556899999999999999999
Q ss_pred hCCCCCCCCCCcccc-chhhhcccccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCC---HHHHHHH
Q 004994 641 TGRKPYDRSRPRGEQ-SLVRWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPP---MSEIVQD 715 (720)
Q Consensus 641 tG~~Pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt---~~evl~~ 715 (720)
+|+.||......... .+..|.. .+. . +. ....++++.+++.+|+. +|.+|++ ++|++++
T Consensus 234 ~G~~Pf~~~~~~~~~~~i~~~~~-~~~--------~-~~-----~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h 296 (364)
T cd05599 234 VGYPPFCSDNPQETYRKIINWKE-TLQ--------F-PD-----EVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSH 296 (364)
T ss_pred cCCCCCCCCCHHHHHHHHHcCCC-ccC--------C-CC-----CCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcC
Confidence 999999754322111 1111100 000 0 00 00123567899999996 9999998 9998864
No 140
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=7.1e-39 Score=307.79 Aligned_cols=247 Identities=26% Similarity=0.380 Sum_probs=207.1
Q ss_pred CCCCCeeccCCCceEEEE-EeCCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEeeC
Q 004994 442 FSEGNFIGEGLLGSVYKA-ELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDYG 520 (720)
Q Consensus 442 ~~~~~~lg~G~~g~Vy~~-~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 520 (720)
|.+..+||+|+||.|||| +.+.|+.+|||.+.- ..+.++..+|+.+|++++.|+||++||.|..+..+++|||||
T Consensus 35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV----~sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYC 110 (502)
T KOG0574|consen 35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPV----DTDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYC 110 (502)
T ss_pred HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCc----cchHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhc
Confidence 445578999999999999 456799999999863 245678999999999999999999999998888999999999
Q ss_pred CCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCCC
Q 004994 521 GNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGST 600 (720)
Q Consensus 521 ~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~~ 600 (720)
..|+..+.++. .+++++...+..|.....+||+|||.. .=||||||+-|||++.+|.+||+|||+|..+.+.
T Consensus 111 GAGSiSDI~R~---R~K~L~E~EIs~iL~~TLKGL~YLH~~---~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDT-- 182 (502)
T KOG0574|consen 111 GAGSISDIMRA---RRKPLSEQEISAVLRDTLKGLQYLHDL---KKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDT-- 182 (502)
T ss_pred CCCcHHHHHHH---hcCCccHHHHHHHHHHHHhHHHHHHHH---HHHHhhcccccEEEcccchhhhhhccccchhhhh--
Confidence 99999999964 457899999999999999999999998 6799999999999999999999999999877432
Q ss_pred cccccCccccccCCCCccCC-CCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcCCCC
Q 004994 601 NELSEGLLTAHGSGAPEFES-GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSL 679 (720)
Q Consensus 601 ~~~~~~~~~~~~~~aPE~~~-~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (720)
........||+.|||||++. -.|+.++||||+|+...||..|++||.+..+......+ + ..|..
T Consensus 183 MAKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFMI-------P--------T~PPP 247 (502)
T KOG0574|consen 183 MAKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFMI-------P--------TKPPP 247 (502)
T ss_pred HHhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeEec-------c--------CCCCC
Confidence 22344578999999999984 46999999999999999999999999765442211100 0 01122
Q ss_pred CchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 680 DGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 680 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
....++..+.+|.+++++||.+.|++|-|+-++++|
T Consensus 248 TF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H 283 (502)
T KOG0574|consen 248 TFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEH 283 (502)
T ss_pred CCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhh
Confidence 233467788899999999999999999999999876
No 141
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=1.4e-37 Score=329.50 Aligned_cols=239 Identities=21% Similarity=0.260 Sum_probs=190.0
Q ss_pred CeeccCCCceEEEEEe----CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEeeCC
Q 004994 446 NFIGEGLLGSVYKAEL----PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDYGG 521 (720)
Q Consensus 446 ~~lg~G~~g~Vy~~~~----~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~ 521 (720)
+.||+|+||.||++.. .+|+.||+|++.+..........+..|++++++++||||+++++++.+.+..++||||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 5799999999999854 368999999997543333344567789999999999999999999999999999999999
Q ss_pred CCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCCCc
Q 004994 522 NCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTN 601 (720)
Q Consensus 522 ~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~ 601 (720)
+|+|.+++.. ...+++.....++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 82 ~~~L~~~l~~----~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~-- 152 (318)
T cd05582 82 GGDLFTRLSK----EVMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE-- 152 (318)
T ss_pred CCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHeEECCCCcEEEeeccCCcccCCCC--
Confidence 9999998853 34588999999999999999999987 99999999999999999999999999997653321
Q ss_pred ccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcCCCCC
Q 004994 602 ELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLD 680 (720)
Q Consensus 602 ~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (720)
.......++..|+|||.. ...++.++|||||||++|||+||+.||......... ..+.....
T Consensus 153 ~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~----------------~~i~~~~~- 215 (318)
T cd05582 153 KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETM----------------TMILKAKL- 215 (318)
T ss_pred CceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHH----------------HHHHcCCC-
Confidence 122235678899999998 456889999999999999999999999753321110 00100000
Q ss_pred chhhHHHHHHHHHHHHHHhccCCCCCCCHHH
Q 004994 681 GAYLAKSLSRFADIISRCVQWEPGFRPPMSE 711 (720)
Q Consensus 681 ~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~e 711 (720)
..+...+..+.+++.+||+.||++||++.+
T Consensus 216 -~~p~~~~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 216 -GMPQFLSPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred -CCCCCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence 011122356789999999999999999544
No 142
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=2.5e-37 Score=335.53 Aligned_cols=253 Identities=20% Similarity=0.270 Sum_probs=194.3
Q ss_pred cCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEeccccc-ccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVS-QRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVY 517 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 517 (720)
++|...+.||+|+||+||++.. .+++.||||++.+... .....+.+.+|++++++++|||||++++++.+.+..|+||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 3688889999999999999954 5789999999864321 2233467888999999999999999999999999999999
Q ss_pred eeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCC
Q 004994 518 DYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFS 597 (720)
Q Consensus 518 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~ 597 (720)
||+++|+|.+++.. ...+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.+..
T Consensus 81 E~~~gg~L~~~l~~----~~~~~~~~~~~~~~ql~~aL~~LH~~---givHrDlkp~NIll~~~~~~kl~DfGla~~~~~ 153 (377)
T cd05629 81 EFLPGGDLMTMLIK----YDTFSEDVTRFYMAECVLAIEAVHKL---GFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHK 153 (377)
T ss_pred eCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEEeeccccccccc
Confidence 99999999999853 34578888889999999999999987 999999999999999999999999999964321
Q ss_pred CCCc---------------------------------------------ccccCccccccCCCCccC-CCCCCCccchHh
Q 004994 598 GSTN---------------------------------------------ELSEGLLTAHGSGAPEFE-SGSYSCQSDVYS 631 (720)
Q Consensus 598 ~~~~---------------------------------------------~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S 631 (720)
.... .......|+.+|+|||.+ ...++.++||||
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwS 233 (377)
T cd05629 154 QHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWS 233 (377)
T ss_pred ccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEe
Confidence 1000 000124588899999998 456899999999
Q ss_pred HHHHHHHHHhCCCCCCCCCCcccc-chhhhcccccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCC---C
Q 004994 632 LGVVMLELLTGRKPYDRSRPRGEQ-SLVRWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFR---P 707 (720)
Q Consensus 632 ~Gvvl~elltG~~Pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~R---P 707 (720)
|||++|||+||+.||......... .+..|.. .+ .+.. ......++.+++.+|+. +|.+| +
T Consensus 234 lGvil~elltG~~Pf~~~~~~~~~~~i~~~~~-~~------------~~p~--~~~~s~~~~dli~~lL~-~~~~r~~r~ 297 (377)
T cd05629 234 LGAIMFECLIGWPPFCSENSHETYRKIINWRE-TL------------YFPD--DIHLSVEAEDLIRRLIT-NAENRLGRG 297 (377)
T ss_pred cchhhhhhhcCCCCCCCCCHHHHHHHHHccCC-cc------------CCCC--CCCCCHHHHHHHHHHhc-CHhhcCCCC
Confidence 999999999999999754322111 1111100 00 0000 00123567899999998 67665 5
Q ss_pred CHHHHHHH
Q 004994 708 PMSEIVQD 715 (720)
Q Consensus 708 t~~evl~~ 715 (720)
++.|++++
T Consensus 298 ~~~~~l~h 305 (377)
T cd05629 298 GAHEIKSH 305 (377)
T ss_pred CHHHHhcC
Confidence 99999875
No 143
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=1.3e-36 Score=312.56 Aligned_cols=253 Identities=25% Similarity=0.376 Sum_probs=201.0
Q ss_pred hcCCCCCCeeccCCCceEEEEEeCCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEe
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYD 518 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 518 (720)
.++|...++||+|+||.||+|..++++.||+|.+.... ...+.+.+|+.++++++|+||+++++++. .+..+++||
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e 80 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGS---MSPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIITE 80 (260)
T ss_pred hHHceeeeeeccCccceEEeeecCCCceEEEEEecCCC---CcHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEE
Confidence 45788889999999999999988889999999987542 33467899999999999999999999874 456899999
Q ss_pred eCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCC
Q 004994 519 YGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSG 598 (720)
Q Consensus 519 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~ 598 (720)
|+.+++|.+++.... ...+++.++..++.+++.||+|||+. +++||||||+||++++++.++|+|||++......
T Consensus 81 ~~~~~~L~~~~~~~~--~~~~~~~~~~~i~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~ 155 (260)
T cd05067 81 YMENGSLVDFLKTPE--GIKLTINKLIDMAAQIAEGMAFIERK---NYIHRDLRAANILVSETLCCKIADFGLARLIEDN 155 (260)
T ss_pred cCCCCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHHhEEEcCCCCEEEccCcceeecCCC
Confidence 999999999886432 34688999999999999999999986 8999999999999999999999999999765422
Q ss_pred CCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcccccCchhhhhhhcC
Q 004994 599 STNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVD 676 (720)
Q Consensus 599 ~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (720)
.. .......++..|+|||+. .+.++.++|||||||++||+++ |+.||........ ... +.+...
T Consensus 156 ~~-~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~---~~~----------~~~~~~ 221 (260)
T cd05067 156 EY-TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEV---IQN----------LERGYR 221 (260)
T ss_pred Cc-ccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHH---HHH----------HHcCCC
Confidence 11 111223345689999988 5678999999999999999999 9999975432111 110 000000
Q ss_pred CCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q 004994 677 PSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLC 718 (720)
Q Consensus 677 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 718 (720)
.. .+...+.++.+++.+|+..+|++|||++++++.|+.
T Consensus 222 ~~----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 222 MP----RPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred CC----CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 00 111233578999999999999999999999999986
No 144
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=1.3e-37 Score=331.61 Aligned_cols=254 Identities=22% Similarity=0.285 Sum_probs=198.5
Q ss_pred cCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEeccccc-ccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVS-QRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVY 517 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 517 (720)
++|...+.||+|+||+||+|.. .+|+.||+|++++... .....+.+.+|+++++.++|+||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 3678889999999999999965 5789999999975432 2234567889999999999999999999999999999999
Q ss_pred eeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCC
Q 004994 518 DYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFS 597 (720)
Q Consensus 518 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~ 597 (720)
||+++|+|.+++... ...+++.....++.|+++||.|||+. +|+||||||+|||++.++.+||+|||++..+..
T Consensus 81 e~~~~~~L~~~l~~~---~~~l~~~~~~~~~~qi~~aL~~lH~~---~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~ 154 (330)
T cd05601 81 EYQPGGDLLSLLNRY---EDQFDEDMAQFYLAELVLAIHSVHQM---GYVHRDIKPENVLIDRTGHIKLADFGSAARLTA 154 (330)
T ss_pred CCCCCCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEcccCchHheEECCCCCEEeccCCCCeECCC
Confidence 999999999998642 24688899999999999999999987 999999999999999999999999999987643
Q ss_pred CCCcccccCccccccCCCCccCC-------CCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhh
Q 004994 598 GSTNELSEGLLTAHGSGAPEFES-------GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDA 670 (720)
Q Consensus 598 ~~~~~~~~~~~~~~~~~aPE~~~-------~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~ 670 (720)
.... ......++..|+|||++. ..++.++|||||||++|||++|+.||...........+. ..
T Consensus 155 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~-------~~-- 224 (330)
T cd05601 155 NKMV-NSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIM-------NF-- 224 (330)
T ss_pred CCce-eeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHH-------cC--
Confidence 2221 222345788999999873 347889999999999999999999997543211110000 00
Q ss_pred hhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 671 LSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 671 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.+... .. .....+.++.+++.+|++ +|++|||+++++++
T Consensus 225 -~~~~~--~~--~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h 263 (330)
T cd05601 225 -QRFLK--FP--EDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCH 263 (330)
T ss_pred -CCccC--CC--CCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCC
Confidence 00000 00 001233568899999998 99999999999864
No 145
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=5.5e-37 Score=325.84 Aligned_cols=248 Identities=20% Similarity=0.243 Sum_probs=193.1
Q ss_pred CCCCCCeeccCCCceEEEEEe-CCCcEEEEEEeccccc-ccccHHHHHHHHHHHHccCCC-ceeEEEeEeccCCeEEEEE
Q 004994 441 SFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVS-QRQTDEEFLELASTISRLRHG-NIVELIGYCNEHGQHLLVY 517 (720)
Q Consensus 441 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~~~e~~~l~~l~H~-niv~l~~~~~~~~~~~lv~ 517 (720)
+|+..+.||+|+||.||+|.. .+++.||||++.+... .....+.+..|.+++..++|+ +|+.+++++.+.+..++||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 477789999999999999965 4678999999975432 233446778899999999764 6888999999999999999
Q ss_pred eeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCC
Q 004994 518 DYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFS 597 (720)
Q Consensus 518 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~ 597 (720)
||+++|+|.+++.. ...+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 81 E~~~~g~L~~~~~~----~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~ 153 (324)
T cd05587 81 EYVNGGDLMYHIQQ----VGKFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDAEGHIKIADFGMCKENIF 153 (324)
T ss_pred cCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEEcCCCCEEEeecCcceecCC
Confidence 99999999988853 34578889999999999999999987 999999999999999999999999999875321
Q ss_pred CCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcC
Q 004994 598 GSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVD 676 (720)
Q Consensus 598 ~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (720)
.. .......++..|+|||++ ...++.++|||||||++|||+||+.||........ . ..+..
T Consensus 154 ~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~---~-------------~~i~~ 215 (324)
T cd05587 154 GG--KTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDEL---F-------------QSIME 215 (324)
T ss_pred CC--CceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHH---H-------------HHHHc
Confidence 11 122235678999999998 45689999999999999999999999975432111 1 00111
Q ss_pred CCCCchhhHHHHHHHHHHHHHHhccCCCCCCCH-----HHHHHH
Q 004994 677 PSLDGAYLAKSLSRFADIISRCVQWEPGFRPPM-----SEIVQD 715 (720)
Q Consensus 677 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~-----~evl~~ 715 (720)
.. ..++.....++.+++.+||+.||++|++. ++++++
T Consensus 216 ~~--~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h 257 (324)
T cd05587 216 HN--VSYPKSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREH 257 (324)
T ss_pred CC--CCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 00 01111233567899999999999999986 566543
No 146
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=5.4e-37 Score=326.37 Aligned_cols=250 Identities=18% Similarity=0.276 Sum_probs=190.8
Q ss_pred CeeccCCCceEEEEEe-CCCcEEEEEEeccccc-ccccHHHHHHHHHHHHcc-CCCceeEEEeEeccCCeEEEEEeeCCC
Q 004994 446 NFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVS-QRQTDEEFLELASTISRL-RHGNIVELIGYCNEHGQHLLVYDYGGN 522 (720)
Q Consensus 446 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv~e~~~~ 522 (720)
+.||+|+||+||+|.. .+++.||+|++++... .....+.+.+|+.++.++ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 4699999999999965 5688999999975432 223345677888888776 899999999999999999999999999
Q ss_pred CCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCCCcc
Q 004994 523 CTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNE 602 (720)
Q Consensus 523 gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~~ 602 (720)
|+|.+++.. ...+++.....++.+++.||+|||+. +|+||||||+|||++.++.+||+|||+++...... .
T Consensus 81 ~~L~~~~~~----~~~l~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~--~ 151 (329)
T cd05618 81 GDLMFHMQR----QRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG--D 151 (329)
T ss_pred CCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCCEEEeeCCccccccCCC--C
Confidence 999988743 34688899999999999999999987 99999999999999999999999999987542211 1
Q ss_pred cccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccc--cchhhhcccccCchhhhhhhcCCCC
Q 004994 603 LSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGE--QSLVRWAIPRLHDIDALSRMVDPSL 679 (720)
Q Consensus 603 ~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (720)
......++..|+|||++ ...++.++|||||||++|||+||+.||........ .....+. ...+.....
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~---------~~~i~~~~~ 222 (329)
T cd05618 152 TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYL---------FQVILEKQI 222 (329)
T ss_pred ccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHH---------HHHHhcCCC
Confidence 22335678999999998 55689999999999999999999999963221110 0000000 001111110
Q ss_pred CchhhHHHHHHHHHHHHHHhccCCCCCCC------HHHHHHH
Q 004994 680 DGAYLAKSLSRFADIISRCVQWEPGFRPP------MSEIVQD 715 (720)
Q Consensus 680 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPt------~~evl~~ 715 (720)
..+......+.+++.+||+.||++||+ +.+++++
T Consensus 223 --~~p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05618 223 --RIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 262 (329)
T ss_pred --CCCCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcC
Confidence 112223456789999999999999998 4677654
No 147
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=1.9e-37 Score=334.97 Aligned_cols=253 Identities=20% Similarity=0.225 Sum_probs=198.4
Q ss_pred HhcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccc-cccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEE
Q 004994 438 YTNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTV-SQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLL 515 (720)
Q Consensus 438 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~-~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~l 515 (720)
..++|...+.||+|+||+||+|.. .+++.||+|++.+.. ......+.+.+|+++++.++||||+++++++.+.+..++
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~l 120 (370)
T cd05596 41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYM 120 (370)
T ss_pred CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEE
Confidence 346788889999999999999965 468999999996432 222344567899999999999999999999999999999
Q ss_pred EEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCC
Q 004994 516 VYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLL 595 (720)
Q Consensus 516 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~ 595 (720)
||||+++|+|.+++.. ..++......++.+++.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 121 v~Ey~~gg~L~~~l~~-----~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~ 192 (370)
T cd05596 121 VMEYMPGGDLVNLMSN-----YDIPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKM 192 (370)
T ss_pred EEcCCCCCcHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEcCCCCEEEEeccceeec
Confidence 9999999999998853 2467777888999999999999987 9999999999999999999999999999866
Q ss_pred CCCCCcccccCccccccCCCCccCCC-----CCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhh
Q 004994 596 FSGSTNELSEGLLTAHGSGAPEFESG-----SYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDA 670 (720)
Q Consensus 596 ~~~~~~~~~~~~~~~~~~~aPE~~~~-----~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~ 670 (720)
..... .......+++.|+|||.+.+ .++.++|||||||++|||++|+.||.........
T Consensus 193 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~--------------- 256 (370)
T cd05596 193 DANGM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTY--------------- 256 (370)
T ss_pred cCCCc-ccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHH---------------
Confidence 43211 12234568899999998732 3789999999999999999999999754321110
Q ss_pred hhhhcCCC--CCchhhHHHHHHHHHHHHHHhccCCCC--CCCHHHHHHH
Q 004994 671 LSRMVDPS--LDGAYLAKSLSRFADIISRCVQWEPGF--RPPMSEIVQD 715 (720)
Q Consensus 671 ~~~~~~~~--~~~~~~~~~~~~l~~l~~~cl~~dP~~--RPt~~evl~~ 715 (720)
..+.... +........+.++.+++.+||+.+|.+ |||++|++++
T Consensus 257 -~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h 304 (370)
T cd05596 257 -SKIMDHKNSLTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSH 304 (370)
T ss_pred -HHHHcCCCcCCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence 1111100 000001123467889999999999988 9999999875
No 148
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=5.1e-37 Score=331.24 Aligned_cols=254 Identities=21% Similarity=0.279 Sum_probs=193.7
Q ss_pred cCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEeccccc-ccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVS-QRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVY 517 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 517 (720)
++|+..+.||+|+||+||+|.. .+++.||||++.+... .......+.+|++++.+++|+||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 4688889999999999999955 5689999999975321 2233456788999999999999999999999999999999
Q ss_pred eeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCC
Q 004994 518 DYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFS 597 (720)
Q Consensus 518 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~ 597 (720)
||+++|+|.+++.. ...+++.....++.|++.||.|||+. +|+||||||+|||++.++++||+|||+++.+..
T Consensus 81 E~~~gg~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~lH~~---givHrDlKp~NILi~~~~~vkL~DFGla~~~~~ 153 (363)
T cd05628 81 EFLPGGDMMTLLMK----KDTLTEEETQFYIAETVLAIDSIHQL---GFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKK 153 (363)
T ss_pred cCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCCEEEeeccCcccccc
Confidence 99999999999853 34688899999999999999999987 999999999999999999999999999976532
Q ss_pred CCCc---------------------------------ccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCC
Q 004994 598 GSTN---------------------------------ELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGR 643 (720)
Q Consensus 598 ~~~~---------------------------------~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~ 643 (720)
.... .......||..|+|||.+ ...++.++|||||||++|||++|+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~ 233 (363)
T cd05628 154 AHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGY 233 (363)
T ss_pred cccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCC
Confidence 1100 001234688999999998 556899999999999999999999
Q ss_pred CCCCCCCCccccc-hhhhcccccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhc--cCCCCCCCHHHHHHH
Q 004994 644 KPYDRSRPRGEQS-LVRWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQ--WEPGFRPPMSEIVQD 715 (720)
Q Consensus 644 ~Pf~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~--~dP~~RPt~~evl~~ 715 (720)
.||.......... +..|.. .+ .+.+.. ...+++.+++.+++. .++..||+++|++++
T Consensus 234 ~Pf~~~~~~~~~~~i~~~~~-~~--------~~p~~~------~~s~~~~~li~~l~~~~~~r~~r~~~~ei~~h 293 (363)
T cd05628 234 PPFCSETPQETYKKVMNWKE-TL--------IFPPEV------PISEKAKDLILRFCCEWEHRIGAPGVEEIKTN 293 (363)
T ss_pred CCCCCCCHHHHHHHHHcCcC-cc--------cCCCcC------CCCHHHHHHHHHHcCChhhcCCCCCHHHHhCC
Confidence 9997543322111 111100 00 011110 122456778877554 233456899999875
No 149
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=2.1e-36 Score=310.46 Aligned_cols=247 Identities=21% Similarity=0.332 Sum_probs=192.3
Q ss_pred eccCCCceEEEEEeC---CCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEeeCCCCC
Q 004994 448 IGEGLLGSVYKAELP---GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDYGGNCT 524 (720)
Q Consensus 448 lg~G~~g~Vy~~~~~---~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gs 524 (720)
||+|+||.||+|.+. ++..||+|++.... .....+.|.+|++++++++|+||+++++++.. +..++||||+++++
T Consensus 3 ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~-~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~-~~~~lv~e~~~~~~ 80 (257)
T cd05115 3 LGSGNFGCVKKGVYKMRKKQIDVAIKVLKNEN-EKSVRDEMMREAEIMHQLDNPYIVRMIGVCEA-EALMLVMEMASGGP 80 (257)
T ss_pred cCCCCcccEEEEEEecCCCceeEEEEEccccc-ChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC-CCeEEEEEeCCCCC
Confidence 899999999999653 45679999987542 23445679999999999999999999999864 57899999999999
Q ss_pred HHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCCCccc-
Q 004994 525 LHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNEL- 603 (720)
Q Consensus 525 L~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~~~- 603 (720)
|.+++... ...+++..+.+++.++++||.|||+. +++||||||+|||++.++.+||+|||+++..........
T Consensus 81 L~~~l~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 154 (257)
T cd05115 81 LNKFLSGK---KDEITVSNVVELMHQVSMGMKYLEGK---NFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKA 154 (257)
T ss_pred HHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhc---CeeecccchheEEEcCCCcEEeccCCccccccCCccceec
Confidence 99988532 34688999999999999999999987 899999999999999999999999999986543322111
Q ss_pred ccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcccccCchhhhhhhcCCCCCc
Q 004994 604 SEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDG 681 (720)
Q Consensus 604 ~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 681 (720)
.....++..|+|||.. ...++.++|||||||++||+++ |+.||......... .. +......
T Consensus 155 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~---~~--------------~~~~~~~ 217 (257)
T cd05115 155 RSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVM---SF--------------IEQGKRL 217 (257)
T ss_pred cCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHH---HH--------------HHCCCCC
Confidence 1111224679999987 4568999999999999999996 99999754321111 10 0000000
Q ss_pred hhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 682 AYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 682 ~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
..+..+++++.+++.+||+.+|++||++.+|.+.|+..
T Consensus 218 ~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 218 DCPAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 11123346788999999999999999999999999874
No 150
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=1.9e-36 Score=309.28 Aligned_cols=247 Identities=25% Similarity=0.411 Sum_probs=195.4
Q ss_pred CeeccCCCceEEEEEeCCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEeeCCCCCH
Q 004994 446 NFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDYGGNCTL 525 (720)
Q Consensus 446 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL 525 (720)
++||+|+||.||+|...+++.||+|.+..... ......+.+|++++++++||||+++++++.+.+..++||||+++++|
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 79 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLP-QELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDF 79 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCC-HHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcH
Confidence 36999999999999888899999999875432 23345788999999999999999999999999999999999999999
Q ss_pred HHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCCCccccc
Q 004994 526 HDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSE 605 (720)
Q Consensus 526 ~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~~~~~ 605 (720)
.+++... ...+++..+..++.+++.||.|+|.. +++||||||+||++++++.+||+|||++......... ...
T Consensus 80 ~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~-~~~ 152 (250)
T cd05085 80 LSFLRKK---KDELKTKQLVKFALDAAAGMAYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYS-SSG 152 (250)
T ss_pred HHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccChheEEEcCCCeEEECCCccceeccccccc-cCC
Confidence 9988532 23578999999999999999999987 9999999999999999999999999998754322111 111
Q ss_pred CccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcccccCchhhhhhhcCCCCCchh
Q 004994 606 GLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDGAY 683 (720)
Q Consensus 606 ~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 683 (720)
...++..|+|||+. .+.++.++|||||||++||+++ |..||...........+ .. ......
T Consensus 153 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~-------------~~----~~~~~~ 215 (250)
T cd05085 153 LKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQV-------------EK----GYRMSC 215 (250)
T ss_pred CCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHH-------------Hc----CCCCCC
Confidence 12335679999988 5678999999999999999998 99999653321111000 00 000011
Q ss_pred hHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 004994 684 LAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLL 717 (720)
Q Consensus 684 ~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 717 (720)
+...+..+.+++.+|++.+|++||++.|+++.|.
T Consensus 216 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 216 PQKCPDDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred CCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 1123467889999999999999999999999885
No 151
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=7.1e-37 Score=331.40 Aligned_cols=265 Identities=20% Similarity=0.324 Sum_probs=197.7
Q ss_pred CCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCC-----eEE
Q 004994 441 SFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHG-----QHL 514 (720)
Q Consensus 441 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~-----~~~ 514 (720)
+|+..+.||+|+||+||++.. .+|+.||||++..........+.+.+|+++++.++|+||+++++++...+ ..+
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 477789999999999999965 57999999998754333344567889999999999999999999998766 789
Q ss_pred EEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCC
Q 004994 515 LVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPL 594 (720)
Q Consensus 515 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~ 594 (720)
+||||+. ++|.+.+.. ...+++.....++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 81 lv~e~~~-~~l~~~~~~----~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~ 152 (372)
T cd07853 81 VVTELMQ-SDLHKIIVS----PQPLSSDHVKVFLYQILRGLKYLHSA---GILHRDIKPGNLLVNSNCVLKICDFGLARV 152 (372)
T ss_pred EEeeccc-cCHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHHEEECCCCCEEeccccceee
Confidence 9999987 478777743 34688999999999999999999987 999999999999999999999999999986
Q ss_pred CCCCCCcccccCccccccCCCCccCCC--CCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhh-
Q 004994 595 LFSGSTNELSEGLLTAHGSGAPEFESG--SYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDAL- 671 (720)
Q Consensus 595 ~~~~~~~~~~~~~~~~~~~~aPE~~~~--~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~- 671 (720)
....... ......++..|+|||.+.+ .++.++|||||||++|||++|+.||....+......+...... ...+.+
T Consensus 153 ~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~-~~~~~~~ 230 (372)
T cd07853 153 EEPDESK-HMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGT-PSLEAMR 230 (372)
T ss_pred cccCccc-cCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCC-CCHHHHH
Confidence 5432211 2223456788999998843 4789999999999999999999999765432221111110000 000000
Q ss_pred ------hhhc-----C-CCCCc--hhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 672 ------SRMV-----D-PSLDG--AYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 672 ------~~~~-----~-~~~~~--~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
...+ . +.... .......+++.+++.+||+.||++|||++|++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 288 (372)
T cd07853 231 SACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH 288 (372)
T ss_pred HhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence 0000 0 00000 0011224578899999999999999999999875
No 152
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=5.7e-37 Score=324.34 Aligned_cols=242 Identities=20% Similarity=0.262 Sum_probs=187.5
Q ss_pred CeeccCCCceEEEEEe-CCCcEEEEEEecccccc-cccHHHHHHHHHHHHcc-CCCceeEEEeEeccCCeEEEEEeeCCC
Q 004994 446 NFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQ-RQTDEEFLELASTISRL-RHGNIVELIGYCNEHGQHLLVYDYGGN 522 (720)
Q Consensus 446 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~-~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv~e~~~~ 522 (720)
+.||+|+||.||+|.. .+|+.||+|.+++.... ....+.+..|.+++... +||||+++++++.+.+..++||||+.+
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 4699999999999965 46899999999754321 22344566777777654 899999999999999999999999999
Q ss_pred CCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCCCcc
Q 004994 523 CTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNE 602 (720)
Q Consensus 523 gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~~ 602 (720)
|+|.+++.. ...+++.....++.++++||+|||+. +|+||||||+|||++.++.+||+|||+++...... .
T Consensus 81 g~L~~~i~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~ 151 (316)
T cd05620 81 GDLMFHIQD----KGRFDLYRATFYAAEIVCGLQFLHSK---GIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGD--N 151 (316)
T ss_pred CcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEeCccCCCeecccCC--C
Confidence 999988853 34578888999999999999999987 99999999999999999999999999987532211 1
Q ss_pred cccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcCCCCCc
Q 004994 603 LSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDG 681 (720)
Q Consensus 603 ~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 681 (720)
......++..|+|||.+ ...++.++|||||||++|||++|+.||...........+.. ..+..
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~--------------~~~~~-- 215 (316)
T cd05620 152 RASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRV--------------DTPHY-- 215 (316)
T ss_pred ceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHh--------------CCCCC--
Confidence 22335678999999998 45789999999999999999999999965332111000000 01111
Q ss_pred hhhHHHHHHHHHHHHHHhccCCCCCCCHH-HHHH
Q 004994 682 AYLAKSLSRFADIISRCVQWEPGFRPPMS-EIVQ 714 (720)
Q Consensus 682 ~~~~~~~~~l~~l~~~cl~~dP~~RPt~~-evl~ 714 (720)
+.....++.+++.+||+.||++||++. ++++
T Consensus 216 --~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~~ 247 (316)
T cd05620 216 --PRWITKESKDILEKLFERDPTRRLGVVGNIRG 247 (316)
T ss_pred --CCCCCHHHHHHHHHHccCCHHHcCCChHHHHc
Confidence 111235678999999999999999984 6653
No 153
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=1e-36 Score=316.38 Aligned_cols=248 Identities=21% Similarity=0.253 Sum_probs=191.2
Q ss_pred eccCCCceEEEEEe-CCCcEEEEEEecccccc-cccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEeeCCCCCH
Q 004994 448 IGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQ-RQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDYGGNCTL 525 (720)
Q Consensus 448 lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL 525 (720)
||+|+||.||++.. .+|+.||+|++...... ......+..|++++++++||||+++++++.+....++||||+++++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 69999999999965 56999999999653222 22334556799999999999999999999999999999999999999
Q ss_pred HHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCCCccccc
Q 004994 526 HDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSE 605 (720)
Q Consensus 526 ~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~~~~~ 605 (720)
.+++... ....+++.....++.|++.||+|||+. +|+||||||+||++++++.+||+|||++....... ...
T Consensus 81 ~~~~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~---~~~ 152 (277)
T cd05607 81 KYHIYNV--GERGLEMERVIHYSAQITCGILHLHSM---DIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK---TIT 152 (277)
T ss_pred HHHHHhc--cccCCCHHHHHHHHHHHHHHHHHHHHC---CEEEccCChHhEEEcCCCCEEEeeceeeeecCCCc---eee
Confidence 9887532 234578899999999999999999987 99999999999999999999999999987664321 112
Q ss_pred CccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcCCCCCchhh
Q 004994 606 GLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDGAYL 684 (720)
Q Consensus 606 ~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 684 (720)
...++..|+|||+. .+.++.++|||||||++|||++|+.||......... .............. ..
T Consensus 153 ~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~------------~~~~~~~~~~~~~~-~~ 219 (277)
T cd05607 153 QRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAK------------EELKRRTLEDEVKF-EH 219 (277)
T ss_pred ccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhH------------HHHHHHhhcccccc-cc
Confidence 34578899999998 556899999999999999999999999643221110 00111111111110 01
Q ss_pred HHHHHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q 004994 685 AKSLSRFADIISRCVQWEPGFRPPMSEIVQDL 716 (720)
Q Consensus 685 ~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L 716 (720)
...+.++.+++.+||+.||++||+++|+++++
T Consensus 220 ~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~ 251 (277)
T cd05607 220 QNFTEESKDICRLFLAKKPEDRLGSREKNDDP 251 (277)
T ss_pred ccCCHHHHHHHHHHhccCHhhCCCCccchhhh
Confidence 12345688999999999999999997766543
No 154
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=1.1e-36 Score=314.27 Aligned_cols=254 Identities=22% Similarity=0.302 Sum_probs=199.1
Q ss_pred hcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEE
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVY 517 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 517 (720)
.++|+..+.||+|+||.||+|.. .+++.||+|++.... ......+.+|+.++++++||||+++++++...+..++||
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~--~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~ 85 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEP--GDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICM 85 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCc--cchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEE
Confidence 35788899999999999999965 578999999986432 223456788999999999999999999999999999999
Q ss_pred eeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCC
Q 004994 518 DYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFS 597 (720)
Q Consensus 518 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~ 597 (720)
||+++++|.++++. ...+++..+..++.|+++||.|||+. +|+||||||+||++++++.+||+|||+++.+..
T Consensus 86 e~~~~~~L~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd06646 86 EYCGGGSLQDIYHV----TGPLSELQIAYVCRETLQGLAYLHSK---GKMHRDIKGANILLTDNGDVKLADFGVAAKITA 158 (267)
T ss_pred eCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEECcCccceeecc
Confidence 99999999998853 24578889999999999999999987 999999999999999999999999999986632
Q ss_pred CCCcccccCccccccCCCCccCC----CCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhh
Q 004994 598 GSTNELSEGLLTAHGSGAPEFES----GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSR 673 (720)
Q Consensus 598 ~~~~~~~~~~~~~~~~~aPE~~~----~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (720)
... ......++..|+|||... ..++.++|||||||++|||++|+.||....+..... .+.....
T Consensus 159 ~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~--~~~~~~~-------- 226 (267)
T cd06646 159 TIA--KRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALF--LMSKSNF-------- 226 (267)
T ss_pred ccc--ccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhhe--eeecCCC--------
Confidence 211 112345678899999862 347889999999999999999999996443221110 0000000
Q ss_pred hcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q 004994 674 MVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDL 716 (720)
Q Consensus 674 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L 716 (720)
..+.... ....+..+.+++.+||+.+|++|||+++++++|
T Consensus 227 -~~~~~~~--~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 227 -QPPKLKD--KTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred -CCCCCcc--ccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 0011100 112345788999999999999999999999875
No 155
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=8.1e-37 Score=349.13 Aligned_cols=262 Identities=24% Similarity=0.277 Sum_probs=201.9
Q ss_pred cCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccc-cccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQ-RQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVY 517 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 517 (720)
++|...+.||+|+||.||+|.. .+|+.||+|++...... ....+.|.+|++++++++||||+++++++.+.+..++||
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 4688889999999999999965 46899999999754322 233567999999999999999999999999999999999
Q ss_pred eeCCCCCHHHHhhccc-------hhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEcccc
Q 004994 518 DYGGNCTLHDLLHSDE-------EAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCG 590 (720)
Q Consensus 518 e~~~~gsL~~~l~~~~-------~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFG 590 (720)
||+++|+|.+++.... ......++....+++.++++||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~---GIIHRDLKPeNILLd~dg~vKLiDFG 158 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSK---GVLHRDLKPDNILLGLFGEVVILDWG 158 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHC---CccccCCchheEEEcCCCCEEEEecC
Confidence 9999999999886321 1123466778899999999999999987 99999999999999999999999999
Q ss_pred CCCCCCCCCC----------------cccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCcc
Q 004994 591 LAPLLFSGST----------------NELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRG 653 (720)
Q Consensus 591 la~~~~~~~~----------------~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~ 653 (720)
+++....... ........|++.|+|||.. ...++.++|||||||++|||+||+.||.......
T Consensus 159 LAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~k 238 (932)
T PRK13184 159 AAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRK 238 (932)
T ss_pred cceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhh
Confidence 9986621100 0011224589999999988 5578999999999999999999999996532211
Q ss_pred ccchhhhcccccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCC-CHHHHHHHHHhh
Q 004994 654 EQSLVRWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRP-PMSEIVQDLLCM 719 (720)
Q Consensus 654 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-t~~evl~~L~~~ 719 (720)
... . ..+.++... ......+..+.+++.+|++.||++|| +++++++.|+..
T Consensus 239 i~~---~-----------~~i~~P~~~-~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~ 290 (932)
T PRK13184 239 ISY---R-----------DVILSPIEV-APYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPH 290 (932)
T ss_pred hhh---h-----------hhccChhhc-cccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 100 0 000010000 00113345688999999999999995 677788877764
No 156
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=7.5e-37 Score=325.38 Aligned_cols=250 Identities=18% Similarity=0.265 Sum_probs=192.1
Q ss_pred CeeccCCCceEEEEEe-CCCcEEEEEEeccccc-ccccHHHHHHHHHHHHcc-CCCceeEEEeEeccCCeEEEEEeeCCC
Q 004994 446 NFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVS-QRQTDEEFLELASTISRL-RHGNIVELIGYCNEHGQHLLVYDYGGN 522 (720)
Q Consensus 446 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv~e~~~~ 522 (720)
++||+|+||+||+|.. .+++.||||++++... .......+.+|..++..+ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 4699999999999965 4689999999975432 223345678899999888 799999999999999999999999999
Q ss_pred CCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCCCcc
Q 004994 523 CTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNE 602 (720)
Q Consensus 523 gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~~ 602 (720)
|+|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++..... ..
T Consensus 81 g~L~~~~~~----~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~--~~ 151 (329)
T cd05588 81 GDLMFHMQR----QRKLPEEHARFYSAEISLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRP--GD 151 (329)
T ss_pred CCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEECcCccccccccC--CC
Confidence 999988743 34689999999999999999999987 9999999999999999999999999998753211 11
Q ss_pred cccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCcc--ccchhhhcccccCchhhhhhhcCCCC
Q 004994 603 LSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRG--EQSLVRWAIPRLHDIDALSRMVDPSL 679 (720)
Q Consensus 603 ~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (720)
......++..|+|||.. ...++.++|||||||++|||+||+.||+...... ......+. ...+.....
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~---------~~~~~~~~~ 222 (329)
T cd05588 152 TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYL---------FQVILEKQI 222 (329)
T ss_pred ccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHH---------HHHHHcCCC
Confidence 22335678999999998 4568999999999999999999999996422111 00000000 001111110
Q ss_pred CchhhHHHHHHHHHHHHHHhccCCCCCCC------HHHHHHH
Q 004994 680 DGAYLAKSLSRFADIISRCVQWEPGFRPP------MSEIVQD 715 (720)
Q Consensus 680 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPt------~~evl~~ 715 (720)
..+...+.++.+++.+||+.||++||+ +++++++
T Consensus 223 --~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05588 223 --RIPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSH 262 (329)
T ss_pred --CCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcC
Confidence 011223456789999999999999997 6777654
No 157
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=6.2e-37 Score=325.27 Aligned_cols=247 Identities=19% Similarity=0.250 Sum_probs=192.5
Q ss_pred CCCCCCeeccCCCceEEEEEe-CCCcEEEEEEeccccc-ccccHHHHHHHHHHHHcc-CCCceeEEEeEeccCCeEEEEE
Q 004994 441 SFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVS-QRQTDEEFLELASTISRL-RHGNIVELIGYCNEHGQHLLVY 517 (720)
Q Consensus 441 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv~ 517 (720)
+|...+.||+|+||+||+|.. .+++.||||++.+... .....+.+..|.+++..+ +|++|+++++++.+.+..++||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 467789999999999999965 4678999999975432 122334566777787777 5899999999999999999999
Q ss_pred eeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCC
Q 004994 518 DYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFS 597 (720)
Q Consensus 518 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~ 597 (720)
||+++|+|.+.+.. ...+++..+..++.|+++||+|||+. +|+||||||+|||+++++.+||+|||+++....
T Consensus 81 E~~~~g~L~~~~~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~ 153 (323)
T cd05616 81 EYVNGGDLMYQIQQ----VGRFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENMW 153 (323)
T ss_pred cCCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEecCCCHHHeEECCCCcEEEccCCCceecCC
Confidence 99999999988853 34588899999999999999999987 999999999999999999999999999975422
Q ss_pred CCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcC
Q 004994 598 GSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVD 676 (720)
Q Consensus 598 ~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (720)
.. .......+++.|+|||.+ .+.++.++|||||||++|||+||+.||........ . ..+..
T Consensus 154 ~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~---~-------------~~i~~ 215 (323)
T cd05616 154 DG--VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDEL---F-------------QSIME 215 (323)
T ss_pred CC--CccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHH---H-------------HHHHh
Confidence 11 122335678999999998 55789999999999999999999999975432111 1 11111
Q ss_pred CCCCchhhHHHHHHHHHHHHHHhccCCCCCCCH-----HHHHH
Q 004994 677 PSLDGAYLAKSLSRFADIISRCVQWEPGFRPPM-----SEIVQ 714 (720)
Q Consensus 677 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~-----~evl~ 714 (720)
... .++.....++.+++.+|++.||++|++. .++.+
T Consensus 216 ~~~--~~p~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~ 256 (323)
T cd05616 216 HNV--AYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 256 (323)
T ss_pred CCC--CCCCcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhc
Confidence 000 1112234577899999999999999984 56554
No 158
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=3.5e-37 Score=332.45 Aligned_cols=254 Identities=19% Similarity=0.230 Sum_probs=197.8
Q ss_pred HHhcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccc-cccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEE
Q 004994 437 QYTNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTV-SQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHL 514 (720)
Q Consensus 437 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~-~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~ 514 (720)
...++|+..+.||+|+||.||++.. .+++.||+|.+.+.. ......+.+.+|+++++.++||||+++++++.+.+..+
T Consensus 40 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~ 119 (370)
T cd05621 40 MKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLY 119 (370)
T ss_pred CCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEE
Confidence 3457899999999999999999965 468899999986432 22234456889999999999999999999999999999
Q ss_pred EEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCC
Q 004994 515 LVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPL 594 (720)
Q Consensus 515 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~ 594 (720)
+||||+++|+|.+++.. ..+++.....++.+++.||+|||+. +|+||||||+|||+++++.+||+|||+|+.
T Consensus 120 lv~Ey~~gg~L~~~l~~-----~~~~~~~~~~~~~qil~aL~~LH~~---~IvHrDLKp~NILl~~~~~~kL~DFG~a~~ 191 (370)
T cd05621 120 MVMEYMPGGDLVNLMSN-----YDVPEKWAKFYTAEVVLALDAIHSM---GLIHRDVKPDNMLLDKHGHLKLADFGTCMK 191 (370)
T ss_pred EEEcCCCCCcHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEEeccccee
Confidence 99999999999998853 2477888899999999999999987 999999999999999999999999999987
Q ss_pred CCCCCCcccccCccccccCCCCccCCC-----CCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchh
Q 004994 595 LFSGSTNELSEGLLTAHGSGAPEFESG-----SYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDID 669 (720)
Q Consensus 595 ~~~~~~~~~~~~~~~~~~~~aPE~~~~-----~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 669 (720)
+..... .......++.+|+|||.+.+ .++.++|||||||++|||+||+.||........
T Consensus 192 ~~~~~~-~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~--------------- 255 (370)
T cd05621 192 MDETGM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGT--------------- 255 (370)
T ss_pred cccCCc-eecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHH---------------
Confidence 643221 11234568999999998732 378899999999999999999999975432111
Q ss_pred hhhhhcCCC--CCchhhHHHHHHHHHHHHHHhccCCCC--CCCHHHHHHH
Q 004994 670 ALSRMVDPS--LDGAYLAKSLSRFADIISRCVQWEPGF--RPPMSEIVQD 715 (720)
Q Consensus 670 ~~~~~~~~~--~~~~~~~~~~~~l~~l~~~cl~~dP~~--RPt~~evl~~ 715 (720)
..++.+.. +........+..+.+++.+|+..++.+ |++++|+++|
T Consensus 256 -~~~i~~~~~~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 256 -YSKIMDHKNSLNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred -HHHHHhCCcccCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 11111110 000001123456789999999865543 8999999876
No 159
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=2.1e-36 Score=315.22 Aligned_cols=268 Identities=23% Similarity=0.300 Sum_probs=198.3
Q ss_pred cCCCCCCeeccCCCceEEEEEe-----CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEecc--CCe
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL-----PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNE--HGQ 512 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~-----~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~--~~~ 512 (720)
++|...+.||+|+||.||++.. .++..||+|++.... ....+.|.+|++++++++||||+++++++.. ...
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 81 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHST--AEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN 81 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCC--HHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCc
Confidence 4677789999999999999964 257899999986432 3345678999999999999999999998754 346
Q ss_pred EEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCC
Q 004994 513 HLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLA 592 (720)
Q Consensus 513 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla 592 (720)
.++||||+++++|.+++... ...+++..+..++.+++.||+|||+. +|+||||||+||++++++.+||+|||++
T Consensus 82 ~~lv~e~~~~~~L~~~l~~~---~~~l~~~~~~~~~~~l~~aL~~LH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~ 155 (284)
T cd05081 82 LRLVMEYLPYGSLRDYLQKH---RERLDHRKLLLYASQICKGMEYLGSK---RYVHRDLATRNILVESENRVKIGDFGLT 155 (284)
T ss_pred eEEEEEecCCCCHHHHHHhc---CcCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHhhEEECCCCeEEECCCccc
Confidence 88999999999999998532 24588999999999999999999987 9999999999999999999999999999
Q ss_pred CCCCCCCCcc-cccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccC---c
Q 004994 593 PLLFSGSTNE-LSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLH---D 667 (720)
Q Consensus 593 ~~~~~~~~~~-~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~---~ 667 (720)
+.+....... ......+...|+|||.. .+.++.++|||||||++|||++|..|+...... ..+....... .
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~----~~~~~~~~~~~~~~ 231 (284)
T cd05081 156 KVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAE----FMRMMGNDKQGQMI 231 (284)
T ss_pred ccccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchh----hhhhcccccccccc
Confidence 8764332211 11112233458999988 457899999999999999999998776432110 0000000000 0
Q ss_pred hhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 668 IDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 668 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
...+.+.+........+...+.++.+++.+||+.+|++|||+.||++.|+.+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 232 VYHLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred hHHHHHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 0001111111111011122346788999999999999999999999999875
No 160
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=2.7e-36 Score=310.21 Aligned_cols=252 Identities=25% Similarity=0.402 Sum_probs=198.8
Q ss_pred cCCCCCCeeccCCCceEEEEEeCCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEee
Q 004994 440 NSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDY 519 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 519 (720)
++|...+.||+|++|.||+|...++..+|+|.+.... ...+.+.+|++++++++|+|++++++++.. +..++||||
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~ 81 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT---MMPEAFLQEAQIMKKLRHDKLVPLYAVVSE-EPIYIVTEF 81 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC---ccHHHHHHHHHHHHhCCCCCeeeEEEEEcC-CCcEEEEEc
Confidence 4577788999999999999988777789999986432 334678899999999999999999998864 568899999
Q ss_pred CCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCC
Q 004994 520 GGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGS 599 (720)
Q Consensus 520 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~ 599 (720)
+.+++|.+++.... ...+++..+..++.++++||.|||+. +++||||||+||++++++.+||+|||+++......
T Consensus 82 ~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~ 156 (260)
T cd05069 82 MGKGSLLDFLKEGD--GKYLKLPQLVDMAAQIADGMAYIERM---NYIHRDLRAANILVGDNLVCKIADFGLARLIEDNE 156 (260)
T ss_pred CCCCCHHHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCeEEECCCccceEccCCc
Confidence 99999999986432 34578999999999999999999987 89999999999999999999999999997664322
Q ss_pred CcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcccccCchhhhhhhcCC
Q 004994 600 TNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDP 677 (720)
Q Consensus 600 ~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (720)
. .......++..|+|||.. .+.++.++|||||||++|||+| |+.||........ ..+. .....+
T Consensus 157 ~-~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~---~~~~----------~~~~~~ 222 (260)
T cd05069 157 Y-TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREV---LEQV----------ERGYRM 222 (260)
T ss_pred c-cccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH---HHHH----------HcCCCC
Confidence 1 111223345679999988 5678999999999999999999 9999975432111 1110 000000
Q ss_pred CCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q 004994 678 SLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLC 718 (720)
Q Consensus 678 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 718 (720)
..+...+..+.+++.+||+.||++||++++|++.|++
T Consensus 223 ----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 223 ----PCPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred ----CCCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 0112234678899999999999999999999999986
No 161
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=1.6e-36 Score=313.45 Aligned_cols=256 Identities=25% Similarity=0.411 Sum_probs=200.0
Q ss_pred CCCCCCeeccCCCceEEEEEeC-CC---cEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEE
Q 004994 441 SFSEGNFIGEGLLGSVYKAELP-GG---KLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLV 516 (720)
Q Consensus 441 ~~~~~~~lg~G~~g~Vy~~~~~-~g---~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 516 (720)
+|...+.||+|+||.||+|... ++ ..||||.+.... .....++|..|+.++++++||||+++++++.+.+..++|
T Consensus 5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv 83 (269)
T cd05065 5 CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGY-TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMII 83 (269)
T ss_pred HeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCC-CHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEE
Confidence 4667789999999999999754 33 369999987543 233457899999999999999999999999999999999
Q ss_pred EeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCC
Q 004994 517 YDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLF 596 (720)
Q Consensus 517 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~ 596 (720)
|||+++++|.+++... ...+++..+..++.+++.||.|||+. +++||||||+||+++.++.+||+|||+++.+.
T Consensus 84 ~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~~l~~al~~lH~~---g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~ 157 (269)
T cd05065 84 TEFMENGALDSFLRQN---DGQFTVIQLVGMLRGIAAGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLSRFLE 157 (269)
T ss_pred EecCCCCcHHHHHhhC---CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccChheEEEcCCCcEEECCCccccccc
Confidence 9999999999998643 34688999999999999999999987 99999999999999999999999999997664
Q ss_pred CCCCccc-ccCcc--ccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcccccCchhhh
Q 004994 597 SGSTNEL-SEGLL--TAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDAL 671 (720)
Q Consensus 597 ~~~~~~~-~~~~~--~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (720)
....... ..... .+..|+|||+. .+.++.++|||||||++||+++ |+.||...... ....+...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~---~~~~~i~~-------- 226 (269)
T cd05065 158 DDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ---DVINAIEQ-------- 226 (269)
T ss_pred cCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHH---HHHHHHHc--------
Confidence 3221111 11111 13469999998 5678999999999999999987 99999653321 11111100
Q ss_pred hhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhC
Q 004994 672 SRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCMI 720 (720)
Q Consensus 672 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~ 720 (720)
... . ..+.+.+..+.+++.+||+.+|++||++++|++.|++++
T Consensus 227 --~~~--~--~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~ 269 (269)
T cd05065 227 --DYR--L--PPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKMI 269 (269)
T ss_pred --CCc--C--CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhhC
Confidence 000 0 011223456789999999999999999999999999875
No 162
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=2.9e-36 Score=309.12 Aligned_cols=249 Identities=27% Similarity=0.441 Sum_probs=200.6
Q ss_pred cCCCCCCeeccCCCceEEEEEeCCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEee
Q 004994 440 NSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDY 519 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 519 (720)
++|...+.||+|+||.||+|... |+.||+|.+..... ..+.+.+|+.++++++|+||+++++++.+.+..++||||
T Consensus 6 ~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 81 (256)
T cd05039 6 KELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST---AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEY 81 (256)
T ss_pred hhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh---HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEe
Confidence 46778899999999999999764 78899999975432 457889999999999999999999999988999999999
Q ss_pred CCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCC
Q 004994 520 GGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGS 599 (720)
Q Consensus 520 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~ 599 (720)
+++++|.+++.... ...+++.....++.+++.||.|||+. +++||||||+||+++.++.+||+|||.++......
T Consensus 82 ~~~~~L~~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~ 156 (256)
T cd05039 82 MAKGSLVDYLRSRG--RAVITLAQQLGFALDVCEGMEYLEEK---NFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQ 156 (256)
T ss_pred cCCCcHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CccchhcccceEEEeCCCCEEEccccccccccccc
Confidence 99999999986432 23689999999999999999999987 99999999999999999999999999998763221
Q ss_pred CcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcccccCchhhhhhhcCC
Q 004994 600 TNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDP 677 (720)
Q Consensus 600 ~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (720)
. ....+..|+|||.. .+.++.++||||||+++||+++ |+.||....... ..... ..
T Consensus 157 ~-----~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~---~~~~~--------------~~ 214 (256)
T cd05039 157 D-----SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD---VVPHV--------------EK 214 (256)
T ss_pred c-----cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHH---HHHHH--------------hc
Confidence 1 12335679999987 5678999999999999999997 999996432211 11000 00
Q ss_pred CCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 678 SLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 678 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
......+...++++.+++.+||..+|++|||++|+++.|+.+
T Consensus 215 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~ 256 (256)
T cd05039 215 GYRMEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLALI 256 (256)
T ss_pred CCCCCCccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhcC
Confidence 000011122346788999999999999999999999999864
No 163
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=1.8e-36 Score=310.72 Aligned_cols=250 Identities=23% Similarity=0.324 Sum_probs=196.6
Q ss_pred CeeccCCCceEEEEEeCC--C--cEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEeeCC
Q 004994 446 NFIGEGLLGSVYKAELPG--G--KLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDYGG 521 (720)
Q Consensus 446 ~~lg~G~~g~Vy~~~~~~--g--~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~ 521 (720)
+.||+|++|.||+|.+.+ + ..||||.+...... ...+.+..|++++++++||||+++++++.+ ...++||||++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~ 78 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS-DIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAP 78 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH-HHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecC
Confidence 468999999999997533 3 36999999865433 456789999999999999999999999988 88999999999
Q ss_pred CCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCCCc
Q 004994 522 NCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTN 601 (720)
Q Consensus 522 ~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~ 601 (720)
+++|.+++..... ..++|.....++.|+++||+|||.. +++||||||+||+++.++.+||+|||+++.+......
T Consensus 79 ~~~L~~~l~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~ 153 (257)
T cd05040 79 LGSLLDRLRKDAL--GHFLISTLCDYAVQIANGMRYLESK---RFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDH 153 (257)
T ss_pred CCcHHHHHHhccc--ccCcHHHHHHHHHHHHHHHHHHHhC---CccccccCcccEEEecCCEEEeccccccccccccccc
Confidence 9999999865321 4689999999999999999999987 9999999999999999999999999999876442211
Q ss_pred -ccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcccccCchhhhhhhcCCC
Q 004994 602 -ELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPS 678 (720)
Q Consensus 602 -~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (720)
.......++..|+|||+. ...++.++|||||||++|||+| |+.||........ ..... . ..
T Consensus 154 ~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~---~~~~~----------~---~~ 217 (257)
T cd05040 154 YVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQI---LKKID----------K---EG 217 (257)
T ss_pred eecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHH---HHHHH----------h---cC
Confidence 112223456789999988 4578999999999999999999 9999964332111 11000 0 00
Q ss_pred CCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q 004994 679 LDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLC 718 (720)
Q Consensus 679 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 718 (720)
.....+...+..+.+++.+|++.+|++||++.|+++.|.+
T Consensus 218 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~ 257 (257)
T cd05040 218 ERLERPEACPQDIYNVMLQCWAHNPADRPTFAALREFLPE 257 (257)
T ss_pred CcCCCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhcC
Confidence 0000112234678899999999999999999999998863
No 164
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=1.4e-36 Score=315.98 Aligned_cols=257 Identities=24% Similarity=0.377 Sum_probs=199.6
Q ss_pred cCCCCCCeeccCCCceEEEEEe------CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL------PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQH 513 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~------~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~ 513 (720)
++|...+.||+|+||.||++.. .++..+|+|.+.... ....+.|.+|+++++.++|+||+++++++.+.+..
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 82 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS--ESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPL 82 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCC--HHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCce
Confidence 4566778999999999999953 235689999886432 34456899999999999999999999999999999
Q ss_pred EEEEeeCCCCCHHHHhhccch-----------hccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCC
Q 004994 514 LLVYDYGGNCTLHDLLHSDEE-----------AHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKL 582 (720)
Q Consensus 514 ~lv~e~~~~gsL~~~l~~~~~-----------~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~ 582 (720)
+++|||+++++|.+++..... ....+++..+..++.|++.||+|||+. +++||||||+|||+++++
T Consensus 83 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~nil~~~~~ 159 (280)
T cd05092 83 LMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASL---HFVHRDLATRNCLVGQGL 159 (280)
T ss_pred EEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHC---CeecccccHhhEEEcCCC
Confidence 999999999999999864321 113578999999999999999999987 899999999999999999
Q ss_pred CeEEccccCCCCCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhh
Q 004994 583 IVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRW 660 (720)
Q Consensus 583 ~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~ 660 (720)
.+||+|||+++.+.............++..|+|||.. ...++.++|||||||++|||++ |+.||..........
T Consensus 160 ~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~---- 235 (280)
T cd05092 160 VVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIE---- 235 (280)
T ss_pred CEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHH----
Confidence 9999999999765432221222223345789999987 4568999999999999999998 999986433211110
Q ss_pred cccccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q 004994 661 AIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLC 718 (720)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 718 (720)
.+.... ....+...+..+.+++.+||+.||++||+++||++.|+.
T Consensus 236 ------------~~~~~~-~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~~ 280 (280)
T cd05092 236 ------------CITQGR-ELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQA 280 (280)
T ss_pred ------------HHHcCc-cCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHhC
Confidence 000000 000111234568899999999999999999999999873
No 165
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.1e-36 Score=320.09 Aligned_cols=259 Identities=23% Similarity=0.381 Sum_probs=199.5
Q ss_pred cCCCCCCeeccCCCceEEEEEeC--------CCcEEEEEEecccccccccHHHHHHHHHHHHcc-CCCceeEEEeEeccC
Q 004994 440 NSFSEGNFIGEGLLGSVYKAELP--------GGKLLAVKKLSNTVSQRQTDEEFLELASTISRL-RHGNIVELIGYCNEH 510 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~~--------~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~ 510 (720)
++|...+.||+|+||.||+|... ....||+|.++.... ......+..|+++++++ +||||++++++|.+.
T Consensus 12 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 90 (314)
T cd05099 12 DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNAT-DKDLADLISEMELMKLIGKHKNIINLLGVCTQE 90 (314)
T ss_pred HHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCC-hHHHHHHHHHHHHHHhccCCCCeeeEEEEEccC
Confidence 46777899999999999999531 245799999875432 23345788999999999 699999999999999
Q ss_pred CeEEEEEeeCCCCCHHHHhhccch------------hccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEE
Q 004994 511 GQHLLVYDYGGNCTLHDLLHSDEE------------AHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILL 578 (720)
Q Consensus 511 ~~~~lv~e~~~~gsL~~~l~~~~~------------~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl 578 (720)
+..++||||+++|+|.+++..... ....++|....+++.+++.||.|||+. +++||||||+|||+
T Consensus 91 ~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~Nill 167 (314)
T cd05099 91 GPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESR---RCIHRDLAARNVLV 167 (314)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHC---CeeeccccceeEEE
Confidence 999999999999999999865321 124588999999999999999999987 99999999999999
Q ss_pred cCCCCeEEccccCCCCCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccc
Q 004994 579 DEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQS 656 (720)
Q Consensus 579 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~ 656 (720)
+.++.+||+|||+++...............++..|+|||.. .+.++.++|||||||++|||++ |..||..........
T Consensus 168 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~ 247 (314)
T cd05099 168 TEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELFK 247 (314)
T ss_pred cCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence 99999999999999866432221111112234579999987 5568999999999999999999 899986432211111
Q ss_pred hhhhcccccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 657 LVRWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 657 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
.. .... ....+..++.++.+++.+||+.+|++|||+.|+++.|+++
T Consensus 248 ~~----------------~~~~-~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~ 293 (314)
T cd05099 248 LL----------------REGH-RMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKV 293 (314)
T ss_pred HH----------------HcCC-CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence 00 0000 0001112345788999999999999999999999999875
No 166
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=2.1e-36 Score=319.11 Aligned_cols=265 Identities=20% Similarity=0.341 Sum_probs=199.4
Q ss_pred cCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEe
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYD 518 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 518 (720)
++|...+.||+|+||.||++.. .++..||+|.+..... .....++.+|++++++++||||++++++|.+.+..++|||
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 79 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIK-PAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICME 79 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccC-HHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEee
Confidence 3688889999999999999965 4688999999865422 2344678899999999999999999999999999999999
Q ss_pred eCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCC
Q 004994 519 YGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSG 598 (720)
Q Consensus 519 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~ 598 (720)
|+++++|.+++.. ...+++.....++.++++||.|||+. .+++||||||+|||+++++.+||+|||++......
T Consensus 80 y~~~~~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~--~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 153 (308)
T cd06615 80 HMDGGSLDQVLKK----AGRIPENILGKISIAVLRGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 153 (308)
T ss_pred ccCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhh--CCEEECCCChHHEEEecCCcEEEccCCCccccccc
Confidence 9999999999853 24578888999999999999999974 27999999999999999999999999998765322
Q ss_pred CCcccccCccccccCCCCccCC-CCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCch---------
Q 004994 599 STNELSEGLLTAHGSGAPEFES-GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDI--------- 668 (720)
Q Consensus 599 ~~~~~~~~~~~~~~~~aPE~~~-~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~--------- 668 (720)
......++..|+|||... ..++.++|||||||++|||+||+.||......................
T Consensus 154 ----~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (308)
T cd06615 154 ----MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGH 229 (308)
T ss_pred ----ccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCC
Confidence 122346778999999884 468999999999999999999999996433211111110000000000
Q ss_pred -----------hhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 669 -----------DALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 669 -----------~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
+....................++.+++.+||+.+|++|||++||+++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 287 (308)
T cd06615 230 PPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKH 287 (308)
T ss_pred CCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00000000000000001134568899999999999999999999976
No 167
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=2.5e-36 Score=312.32 Aligned_cols=251 Identities=24% Similarity=0.356 Sum_probs=192.6
Q ss_pred CeeccCCCceEEEEEeC-CCc--EEEEEEecccccccccHHHHHHHHHHHHcc-CCCceeEEEeEeccCCeEEEEEeeCC
Q 004994 446 NFIGEGLLGSVYKAELP-GGK--LLAVKKLSNTVSQRQTDEEFLELASTISRL-RHGNIVELIGYCNEHGQHLLVYDYGG 521 (720)
Q Consensus 446 ~~lg~G~~g~Vy~~~~~-~g~--~vavK~l~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv~e~~~ 521 (720)
++||+|+||.||+|... ++. .+|+|.++... .....+.+..|++++.++ +||||+++++++...+..++||||++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~ 79 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA-SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAP 79 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccC-CHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCC
Confidence 36899999999999764 444 46888886432 234456788999999999 89999999999999999999999999
Q ss_pred CCCHHHHhhccch------------hccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccc
Q 004994 522 NCTLHDLLHSDEE------------AHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDC 589 (720)
Q Consensus 522 ~gsL~~~l~~~~~------------~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DF 589 (720)
+|+|.+++..... ....+++..+..++.+++.||+|||+. +++||||||+||++++++.+||+||
T Consensus 80 ~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nili~~~~~~kl~df 156 (270)
T cd05047 80 HGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADF 156 (270)
T ss_pred CCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccccceEEEcCCCeEEECCC
Confidence 9999999864321 123578999999999999999999986 9999999999999999999999999
Q ss_pred cCCCCCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcccccCc
Q 004994 590 GLAPLLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHD 667 (720)
Q Consensus 590 Gla~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~ 667 (720)
|+++...... .......+..|+|||+. ...++.++|||||||++|||++ |+.||........ ...
T Consensus 157 gl~~~~~~~~---~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~---~~~------- 223 (270)
T cd05047 157 GLSRGQEVYV---KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAEL---YEK------- 223 (270)
T ss_pred CCccccchhh---hccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHH---HHH-------
Confidence 9986332110 01111234579999987 5568999999999999999997 9999964322110 100
Q ss_pred hhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhC
Q 004994 668 IDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCMI 720 (720)
Q Consensus 668 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~ 720 (720)
+ ........+.....++.+++.+|++.+|.+|||+.|+++.|++|+
T Consensus 224 ------~-~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 224 ------L-PQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred ------H-hCCCCCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 0 000000011123356889999999999999999999999999875
No 168
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.8e-36 Score=323.42 Aligned_cols=260 Identities=23% Similarity=0.378 Sum_probs=200.5
Q ss_pred cCCCCCCeeccCCCceEEEEEeC--------CCcEEEEEEecccccccccHHHHHHHHHHHHcc-CCCceeEEEeEeccC
Q 004994 440 NSFSEGNFIGEGLLGSVYKAELP--------GGKLLAVKKLSNTVSQRQTDEEFLELASTISRL-RHGNIVELIGYCNEH 510 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~~--------~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~ 510 (720)
.+|...+.||+|+||.||+|... .+..||+|.+.... .....+++.+|+++++++ +||||++++++|.+.
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 90 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDA-TDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 90 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEccccc-CHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccC
Confidence 45788899999999999999532 12368999886432 223456789999999999 899999999999999
Q ss_pred CeEEEEEeeCCCCCHHHHhhccc------------hhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEE
Q 004994 511 GQHLLVYDYGGNCTLHDLLHSDE------------EAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILL 578 (720)
Q Consensus 511 ~~~~lv~e~~~~gsL~~~l~~~~------------~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl 578 (720)
+..+++|||+++|+|.+++.... .....++|..+..++.|+++||.|||.. +++||||||+|||+
T Consensus 91 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~Nill 167 (334)
T cd05100 91 GPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQ---KCIHRDLAARNVLV 167 (334)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEE
Confidence 99999999999999999986432 1224588999999999999999999987 99999999999999
Q ss_pred cCCCCeEEccccCCCCCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccc
Q 004994 579 DEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQS 656 (720)
Q Consensus 579 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~ 656 (720)
++++.+||+|||+++...............++..|+|||.. ...++.++|||||||++|||++ |+.||..........
T Consensus 168 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~ 247 (334)
T cd05100 168 TEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFK 247 (334)
T ss_pred cCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Confidence 99999999999999866432221111222334579999988 5578999999999999999998 889986532211110
Q ss_pred hhhhcccccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhC
Q 004994 657 LVRWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCMI 720 (720)
Q Consensus 657 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~ 720 (720)
.+ .. ......+...+.++.+++.+||+.+|++|||+.|+++.|++++
T Consensus 248 ~~----------------~~-~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~ 294 (334)
T cd05100 248 LL----------------KE-GHRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVL 294 (334)
T ss_pred HH----------------Hc-CCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHh
Confidence 00 00 0000011123457889999999999999999999999998763
No 169
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=2.4e-36 Score=311.91 Aligned_cols=257 Identities=25% Similarity=0.375 Sum_probs=200.8
Q ss_pred cCCCCCCeeccCCCceEEEEEeC-C---CcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAELP-G---GKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLL 515 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~~-~---g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~l 515 (720)
.+|...+.||+|+||.||+|... + +..+|+|.++.... ....+.|.+|+.++++++||||+++++++.+.+..++
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 82 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYT-EKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMI 82 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCC-HHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEE
Confidence 46777899999999999999653 2 34799999875432 2345688999999999999999999999999999999
Q ss_pred EEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCC
Q 004994 516 VYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLL 595 (720)
Q Consensus 516 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~ 595 (720)
||||+++++|.+++... ...+++.+..+++.+++.||.|||+. +++||||||+|||++.++.+||+|||+++.+
T Consensus 83 v~e~~~~~~L~~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~~~l~dfg~~~~~ 156 (267)
T cd05066 83 VTEYMENGSLDAFLRKH---DGQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILVNSNLVCKVSDFGLSRVL 156 (267)
T ss_pred EEEcCCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeehhhchhcEEECCCCeEEeCCCCccccc
Confidence 99999999999998643 24578999999999999999999987 8999999999999999999999999999876
Q ss_pred CCCCCccc-ccCccccccCCCCccCC-CCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcccccCchhhhh
Q 004994 596 FSGSTNEL-SEGLLTAHGSGAPEFES-GSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALS 672 (720)
Q Consensus 596 ~~~~~~~~-~~~~~~~~~~~aPE~~~-~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (720)
........ ......+..|++||... +.++.++|||||||++||+++ |+.||........ .....
T Consensus 157 ~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~---~~~~~---------- 223 (267)
T cd05066 157 EDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDV---IKAIE---------- 223 (267)
T ss_pred ccccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHH---HHHHh----------
Confidence 43221111 11112245799999984 578999999999999999886 9999965432211 11100
Q ss_pred hhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhC
Q 004994 673 RMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCMI 720 (720)
Q Consensus 673 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~ 720 (720)
+..... .....+..+.+++.+|++.+|++||+|.++++.|++++
T Consensus 224 ~~~~~~----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~ 267 (267)
T cd05066 224 EGYRLP----APMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKLI 267 (267)
T ss_pred CCCcCC----CCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhhC
Confidence 000000 01123457789999999999999999999999999875
No 170
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=3.1e-36 Score=307.86 Aligned_cols=249 Identities=25% Similarity=0.408 Sum_probs=196.6
Q ss_pred CeeccCCCceEEEEEeCCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEeeCCCCCH
Q 004994 446 NFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDYGGNCTL 525 (720)
Q Consensus 446 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL 525 (720)
+.||+|+||.||++...+++.||+|.+...... ...+.+..|++++++++|+||+++++++.+....++||||+++++|
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l 79 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPP-DLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSL 79 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCH-HHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcH
Confidence 469999999999998766999999998754332 3456899999999999999999999999999999999999999999
Q ss_pred HHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCCCccccc
Q 004994 526 HDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSE 605 (720)
Q Consensus 526 ~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~~~~~ 605 (720)
.+++... ...+++.....++.+++.||+|||+. +++||||||+||+++.++.+||+|||+++............
T Consensus 80 ~~~l~~~---~~~~~~~~~~~~~~~~~~~l~~lH~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~ 153 (251)
T cd05041 80 LTFLRKK---KNRLTVKKLLQMSLDAAAGMEYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDG 153 (251)
T ss_pred HHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccc
Confidence 9998542 23578888999999999999999987 89999999999999999999999999998654222111111
Q ss_pred CccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcccccCchhhhhhhcCCCCCchh
Q 004994 606 GLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDGAY 683 (720)
Q Consensus 606 ~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 683 (720)
....+..|+|||.. .+.++.++|||||||++|||+| |..||...........+ ........
T Consensus 154 ~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~-----------------~~~~~~~~ 216 (251)
T cd05041 154 LKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERI-----------------ESGYRMPA 216 (251)
T ss_pred cCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHH-----------------hcCCCCCC
Confidence 12234569999987 5678999999999999999999 88998654321111110 00000011
Q ss_pred hHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q 004994 684 LAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLC 718 (720)
Q Consensus 684 ~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 718 (720)
+...+.++.+++.+|++.+|++|||++|+++.|+.
T Consensus 217 ~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~~ 251 (251)
T cd05041 217 PQLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQI 251 (251)
T ss_pred CccCCHHHHHHHHHHhccChhhCcCHHHHHHHhhC
Confidence 12334678899999999999999999999999863
No 171
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=2.8e-37 Score=329.39 Aligned_cols=197 Identities=24% Similarity=0.380 Sum_probs=170.5
Q ss_pred CCCCCCeeccCCCceEEEE-EeCCCcEEEEEEecccccccccHHHHHHHHHHHHccC-CC-----ceeEEEeEeccCCeE
Q 004994 441 SFSEGNFIGEGLLGSVYKA-ELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLR-HG-----NIVELIGYCNEHGQH 513 (720)
Q Consensus 441 ~~~~~~~lg~G~~g~Vy~~-~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~-H~-----niv~l~~~~~~~~~~ 513 (720)
+|.+.++||+|+||.|.|| ++++++.||||+++.. .....+...|+++|..++ |. |+|++++||...++.
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~---k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hl 263 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNK---KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHL 263 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccC---hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccce
Confidence 7888999999999999999 6778999999999865 345567788999999997 53 899999999999999
Q ss_pred EEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcC--CCCeEEccccC
Q 004994 514 LLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDE--KLIVRVSDCGL 591 (720)
Q Consensus 514 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~--~~~~kl~DFGl 591 (720)
+||+|.++. +|.++++... ...++......++.||+.||.+||+. +|||+||||+||||.+ ...+||+|||.
T Consensus 264 ciVfELL~~-NLYellK~n~--f~Glsl~~ir~~~~Qil~~L~~L~~l---~IIHcDLKPENILL~~~~r~~vKVIDFGS 337 (586)
T KOG0667|consen 264 CIVFELLST-NLYELLKNNK--FRGLSLPLVRKFAQQILTALLFLHEL---GIIHCDLKPENILLKDPKRSRIKVIDFGS 337 (586)
T ss_pred eeeehhhhh-hHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCChhheeeccCCcCceeEEeccc
Confidence 999999886 9999997654 45688899999999999999999987 9999999999999964 34799999999
Q ss_pred CCCCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCC
Q 004994 592 APLLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRP 651 (720)
Q Consensus 592 a~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~ 651 (720)
|.+....-. ...-+++|+|||++ +.+|+.+.|+||||||++||+||.+-|.+..+
T Consensus 338 Sc~~~q~vy-----tYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne 393 (586)
T KOG0667|consen 338 SCFESQRVY-----TYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNE 393 (586)
T ss_pred ccccCCcce-----eeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCH
Confidence 987643222 35667899999998 67899999999999999999999888876554
No 172
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=2.4e-36 Score=309.84 Aligned_cols=248 Identities=27% Similarity=0.416 Sum_probs=196.1
Q ss_pred cCCCCCCeeccCCCceEEEEEeCCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEec-cCCeEEEEEe
Q 004994 440 NSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCN-EHGQHLLVYD 518 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~-~~~~~~lv~e 518 (720)
++|...+.||+|+||.||++... |..||+|.++.. ...+.|.+|+.++++++|+|++++++++. +.+..++|||
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKND----ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE 80 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCC----chHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEE
Confidence 46777899999999999999764 778999998643 23457899999999999999999999764 5567899999
Q ss_pred eCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCC
Q 004994 519 YGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSG 598 (720)
Q Consensus 519 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~ 598 (720)
|+++++|.+++.... ...+++.....++.+++.||+|||+. +++||||||+||++++++.+||+|||+++.....
T Consensus 81 ~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~ 155 (256)
T cd05082 81 YMAKGSLVDYLRSRG--RSVLGGDCLLKFSLDVCEAMEYLEAN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST 155 (256)
T ss_pred CCCCCcHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CEeccccchheEEEcCCCcEEecCCccceecccc
Confidence 999999999986432 23578999999999999999999987 9999999999999999999999999998765322
Q ss_pred CCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcccccCchhhhhhhcC
Q 004994 599 STNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVD 676 (720)
Q Consensus 599 ~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (720)
. .....+..|+|||+. ...++.++|||||||++|||++ |+.||....... ..... .
T Consensus 156 ~-----~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~---~~~~~--------------~ 213 (256)
T cd05082 156 Q-----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD---VVPRV--------------E 213 (256)
T ss_pred C-----CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHH---HHHHH--------------h
Confidence 1 112334679999988 4568999999999999999998 999986432111 11110 0
Q ss_pred CCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 677 PSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 677 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
...........+..+.+++.+|++.+|++|||++++++.|+++
T Consensus 214 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 214 KGYKMDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred cCCCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence 0000011122346788999999999999999999999999874
No 173
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=2.5e-36 Score=313.89 Aligned_cols=250 Identities=22% Similarity=0.361 Sum_probs=194.4
Q ss_pred CCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEee
Q 004994 441 SFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDY 519 (720)
Q Consensus 441 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 519 (720)
+|...+.||+|+||.||+|.. .+++.||+|.+..... ....+++.+|++++++++||||+++++++...+..++||||
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 80 (279)
T cd06619 2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDIT-VELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEF 80 (279)
T ss_pred cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCC-hHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEec
Confidence 567788999999999999954 6789999999865422 23446788999999999999999999999999999999999
Q ss_pred CCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCC
Q 004994 520 GGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGS 599 (720)
Q Consensus 520 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~ 599 (720)
+++++|..+. .+++.....++.+++.||.|||+. +|+|+||||+|||++.++.+||+|||++..+...
T Consensus 81 ~~~~~l~~~~--------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~- 148 (279)
T cd06619 81 MDGGSLDVYR--------KIPEHVLGRIAVAVVKGLTYLWSL---KILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS- 148 (279)
T ss_pred CCCCChHHhh--------cCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCCHHHEEECCCCCEEEeeCCcceecccc-
Confidence 9999986542 356777889999999999999987 9999999999999999999999999999765322
Q ss_pred CcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcCCC
Q 004994 600 TNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPS 678 (720)
Q Consensus 600 ~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (720)
......++..|+|||+. ...++.++|||||||++|||++|+.||............ ......+.++.
T Consensus 149 ---~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~---------~~~~~~~~~~~ 216 (279)
T cd06619 149 ---IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMP---------LQLLQCIVDED 216 (279)
T ss_pred ---cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccch---------HHHHHHHhccC
Confidence 12234678899999998 456899999999999999999999999653221111000 00011111111
Q ss_pred CCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 679 LDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 679 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
...........++.+++.+|++.+|++||+++|++++
T Consensus 217 ~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 217 PPVLPVGQFSEKFVHFITQCMRKQPKERPAPENLMDH 253 (279)
T ss_pred CCCCCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 1100011233568899999999999999999999875
No 174
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=8.3e-37 Score=323.51 Aligned_cols=243 Identities=22% Similarity=0.295 Sum_probs=191.3
Q ss_pred CeeccCCCceEEEEEeC-CCcEEEEEEeccccc-ccccHHHHHHHHHHHHcc-CCCceeEEEeEeccCCeEEEEEeeCCC
Q 004994 446 NFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVS-QRQTDEEFLELASTISRL-RHGNIVELIGYCNEHGQHLLVYDYGGN 522 (720)
Q Consensus 446 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv~e~~~~ 522 (720)
+.||+|+||+||+|... +++.||||++++... .......+..|.++++.+ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999654 588999999975432 223345677888888877 799999999999999999999999999
Q ss_pred CCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCCCcc
Q 004994 523 CTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNE 602 (720)
Q Consensus 523 gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~~ 602 (720)
|+|.+.+.. ...+++.....++.+++.||.|||+. +|+||||||+|||+++++.+||+|||+++...... .
T Consensus 81 ~~L~~~~~~----~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~--~ 151 (318)
T cd05570 81 GDLMFHIQR----SGRFDEPRARFYAAEIVLGLQFLHER---GIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGG--V 151 (318)
T ss_pred CCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEccCCCHHHeEECCCCcEEecccCCCeecCcCC--C
Confidence 999988753 34688999999999999999999987 99999999999999999999999999987532211 1
Q ss_pred cccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcCCCCCc
Q 004994 603 LSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDG 681 (720)
Q Consensus 603 ~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 681 (720)
......++..|+|||.+ ...++.++|||||||++|||+||+.||....... ... .+.....
T Consensus 152 ~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~---~~~-------------~i~~~~~-- 213 (318)
T cd05570 152 TTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDE---LFQ-------------SILEDEV-- 213 (318)
T ss_pred cccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHH---HHH-------------HHHcCCC--
Confidence 12234578899999998 5578999999999999999999999996533211 000 0000000
Q ss_pred hhhHHHHHHHHHHHHHHhccCCCCCCCH-----HHHHHH
Q 004994 682 AYLAKSLSRFADIISRCVQWEPGFRPPM-----SEIVQD 715 (720)
Q Consensus 682 ~~~~~~~~~l~~l~~~cl~~dP~~RPt~-----~evl~~ 715 (720)
.++...+.++.+++.+||+.||++||++ .+++++
T Consensus 214 ~~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~ 252 (318)
T cd05570 214 RYPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGH 252 (318)
T ss_pred CCCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcC
Confidence 0111234568899999999999999999 888754
No 175
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=6.2e-37 Score=351.30 Aligned_cols=259 Identities=19% Similarity=0.286 Sum_probs=200.4
Q ss_pred HHhcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEecc--CCeE
Q 004994 437 QYTNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNE--HGQH 513 (720)
Q Consensus 437 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~--~~~~ 513 (720)
...++|.+.+.||+|+||+||+|.. .++..||+|.+............|..|+.++++++|||||+++++|.+ .+.+
T Consensus 10 ~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~l 89 (1021)
T PTZ00266 10 SRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKL 89 (1021)
T ss_pred cccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEE
Confidence 3457899999999999999999965 467899999987554444456788999999999999999999998853 4578
Q ss_pred EEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcC----CCCeeecCCCCCCeEEcCC--------
Q 004994 514 LLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVC----EPPIVHGNFKSSNILLDEK-------- 581 (720)
Q Consensus 514 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~----~~~ivHrDlkp~NiLl~~~-------- 581 (720)
|+||||+++|+|.+++.........+++..++.|+.||+.||+|||... .++||||||||+|||++.+
T Consensus 90 yIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~ 169 (1021)
T PTZ00266 90 YILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKIT 169 (1021)
T ss_pred EEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccccccc
Confidence 9999999999999998654333457899999999999999999999853 1469999999999999642
Q ss_pred ---------CCeEEccccCCCCCCCCCCcccccCccccccCCCCccCC---CCCCCccchHhHHHHHHHHHhCCCCCCCC
Q 004994 582 ---------LIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFES---GSYSCQSDVYSLGVVMLELLTGRKPYDRS 649 (720)
Q Consensus 582 ---------~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~---~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~ 649 (720)
+.+||+|||+++.+.... ......+++.|+|||++. ..++.++||||||||+|||+||+.||...
T Consensus 170 ~~~~n~ng~~iVKLsDFGlAr~l~~~s---~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~ 246 (1021)
T PTZ00266 170 AQANNLNGRPIAKIGDFGLSKNIGIES---MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKA 246 (1021)
T ss_pred ccccccCCCCceEEccCCccccccccc---cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcC
Confidence 358999999998763321 223456889999999873 34889999999999999999999999643
Q ss_pred CCccccchhhhcccccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 650 RPRGEQSLVRWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.... .+.. .+... +.+.. ...+.++.+|+.+||+.+|.+||++.|++++
T Consensus 247 ~~~~--qli~----------~lk~~--p~lpi---~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h 295 (1021)
T PTZ00266 247 NNFS--QLIS----------ELKRG--PDLPI---KGKSKELNILIKNLLNLSAKERPSALQCLGY 295 (1021)
T ss_pred CcHH--HHHH----------HHhcC--CCCCc---CCCCHHHHHHHHHHhcCChhHCcCHHHHhcc
Confidence 2211 0010 00000 11100 1123568899999999999999999999853
No 176
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=1.7e-36 Score=326.95 Aligned_cols=265 Identities=20% Similarity=0.260 Sum_probs=195.5
Q ss_pred HhcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccC------
Q 004994 438 YTNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEH------ 510 (720)
Q Consensus 438 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~------ 510 (720)
..++|...+.||+|+||.||++.. .+|+.||||++............+.+|+.+++.++||||+++++++...
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 98 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF 98 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence 457889999999999999999954 5689999999976544445567788999999999999999999998643
Q ss_pred CeEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEcccc
Q 004994 511 GQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCG 590 (720)
Q Consensus 511 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFG 590 (720)
...++||||+++ ++.+.++ ..+++.....++.|+++||.|||+. +|+||||||+|||++.++.+||+|||
T Consensus 99 ~~~~lv~e~~~~-~l~~~~~------~~~~~~~~~~~~~qi~~~L~~LH~~---~ivHrDlkp~NIl~~~~~~~kl~Dfg 168 (359)
T cd07876 99 QDVYLVMELMDA-NLCQVIH------MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 168 (359)
T ss_pred ceeEEEEeCCCc-CHHHHHh------ccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEecCC
Confidence 357999999986 5655553 2467788889999999999999987 99999999999999999999999999
Q ss_pred CCCCCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccc-hhhhcc-cccCc
Q 004994 591 LAPLLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQS-LVRWAI-PRLHD 667 (720)
Q Consensus 591 la~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~-~~~~~~-~~~~~ 667 (720)
+++..... .......++..|+|||.+ ...++.++|||||||++|||+||+.||...+...... ..+... +....
T Consensus 169 ~a~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 245 (359)
T cd07876 169 LARTACTN---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEF 245 (359)
T ss_pred CccccccC---ccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHH
Confidence 99764321 122335678899999998 4578999999999999999999999997543221100 000000 00000
Q ss_pred h----hhhhhhc--CCCCCc----------------hhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 668 I----DALSRMV--DPSLDG----------------AYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 668 ~----~~~~~~~--~~~~~~----------------~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
. ....... .+...+ ........++.+++.+||+.||++|||+.|++++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 315 (359)
T cd07876 246 MNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRH 315 (359)
T ss_pred HHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcC
Confidence 0 0000000 000000 0011123568899999999999999999999976
No 177
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=8.8e-37 Score=324.14 Aligned_cols=238 Identities=23% Similarity=0.277 Sum_probs=184.3
Q ss_pred CeeccCCCceEEEEEe-CCCcEEEEEEeccccc-ccccHHHHHHHHH-HHHccCCCceeEEEeEeccCCeEEEEEeeCCC
Q 004994 446 NFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVS-QRQTDEEFLELAS-TISRLRHGNIVELIGYCNEHGQHLLVYDYGGN 522 (720)
Q Consensus 446 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~~~e~~-~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 522 (720)
+.||+|+||+||+|.. .+|+.||+|++.+... .......+..|.. +++.++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 4699999999999965 5799999999975321 1222334444444 56889999999999999999999999999999
Q ss_pred CCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCCCcc
Q 004994 523 CTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNE 602 (720)
Q Consensus 523 gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~~ 602 (720)
|+|.+++.. ...+++.....++.|+++||.|||+. +|+||||||+|||++.++.+||+|||+++...... .
T Consensus 81 g~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~--~ 151 (323)
T cd05575 81 GELFFHLQR----ERSFPEPRARFYAAEIASALGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHS--K 151 (323)
T ss_pred CCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeccCCCcccccCC--C
Confidence 999988853 34678888899999999999999987 99999999999999999999999999987542211 1
Q ss_pred cccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcCCCCCc
Q 004994 603 LSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDG 681 (720)
Q Consensus 603 ~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 681 (720)
......++..|+|||.. ...++.++|||||||++|||++|+.||........ ...+......
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~----------------~~~i~~~~~~- 214 (323)
T cd05575 152 TTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEM----------------YDNILNKPLR- 214 (323)
T ss_pred ccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHH----------------HHHHHcCCCC-
Confidence 22335678999999988 55689999999999999999999999965332110 0011110000
Q ss_pred hhhHHHHHHHHHHHHHHhccCCCCCCCHH
Q 004994 682 AYLAKSLSRFADIISRCVQWEPGFRPPMS 710 (720)
Q Consensus 682 ~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ 710 (720)
.....+..+.+++.+||+.||.+||++.
T Consensus 215 -~~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 215 -LKPNISVSARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred -CCCCCCHHHHHHHHHHhhcCHHhCCCCC
Confidence 0111235678999999999999999984
No 178
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=3.4e-36 Score=309.05 Aligned_cols=251 Identities=29% Similarity=0.464 Sum_probs=201.0
Q ss_pred CeeccCCCceEEEEEeCC----CcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEeeCC
Q 004994 446 NFIGEGLLGSVYKAELPG----GKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDYGG 521 (720)
Q Consensus 446 ~~lg~G~~g~Vy~~~~~~----g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~ 521 (720)
+.||+|+||.||+|.... +..||+|.+....... ..+.+.+|++.++.++|+||+++++++.+.+..++||||++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 79 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEE-ERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYME 79 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchh-HHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEecc
Confidence 469999999999996643 7899999997654322 46788999999999999999999999999999999999999
Q ss_pred CCCHHHHhhccchh-----ccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCC
Q 004994 522 NCTLHDLLHSDEEA-----HKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLF 596 (720)
Q Consensus 522 ~gsL~~~l~~~~~~-----~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~ 596 (720)
+++|.+++...... ...+++..+.+++.++++||+|||+. +++||||||+||++++++.+||+|||.+....
T Consensus 80 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~nili~~~~~~~l~dfg~~~~~~ 156 (262)
T cd00192 80 GGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK---KFVHRDLAARNCLVGEDLVVKISDFGLSRDVY 156 (262)
T ss_pred CCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcC---CcccCccCcceEEECCCCcEEEcccccccccc
Confidence 99999998654211 36789999999999999999999987 89999999999999999999999999998775
Q ss_pred CCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcccccCchhhhhhh
Q 004994 597 SGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRM 674 (720)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (720)
............++..|+|||.. ...++.++|||||||++|||++ |+.||....... ... .+
T Consensus 157 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~---~~~-------------~~ 220 (262)
T cd00192 157 DDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEE---VLE-------------YL 220 (262)
T ss_pred cccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHH---HHH-------------HH
Confidence 43322223344567789999988 4578999999999999999999 699997542211 111 01
Q ss_pred cCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 004994 675 VDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLL 717 (720)
Q Consensus 675 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 717 (720)
.+. .....+...+.++.+++.+||+.+|++|||+.|++++|+
T Consensus 221 ~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 221 RKG-YRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred HcC-CCCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 100 000112223567889999999999999999999999874
No 179
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.3e-37 Score=320.42 Aligned_cols=254 Identities=21% Similarity=0.343 Sum_probs=208.9
Q ss_pred hcCCCCCCeeccCCCceEEEEEeCCCcEEEEEEecccccccccHHHHHHHHHHHHcc-CCCceeEEEeEeccCCeEEEEE
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRL-RHGNIVELIGYCNEHGQHLLVY 517 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv~ 517 (720)
...|++.+.||+||.++||++...+.+.||+|++.....+......|..|++.|.+| .|.+||++|+|-..++.+||||
T Consensus 360 g~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvm 439 (677)
T KOG0596|consen 360 GREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVM 439 (677)
T ss_pred cchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEe
Confidence 456888899999999999999888888999999876666667778899999999999 5999999999999999999999
Q ss_pred eeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCC
Q 004994 518 DYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFS 597 (720)
Q Consensus 518 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~ 597 (720)
||.+ .+|..+|.... .....| .+..+..|++.|+.++|+. ||||.||||.|+|+-+ |.+||+|||+|..+..
T Consensus 440 E~Gd-~DL~kiL~k~~--~~~~~~-~lk~ywkqML~aV~~IH~~---gIVHSDLKPANFLlVk-G~LKLIDFGIA~aI~~ 511 (677)
T KOG0596|consen 440 ECGD-IDLNKILKKKK--SIDPDW-FLKFYWKQMLLAVKTIHQH---GIVHSDLKPANFLLVK-GRLKLIDFGIANAIQP 511 (677)
T ss_pred eccc-ccHHHHHHhcc--CCCchH-HHHHHHHHHHHHHHHHHHh---ceeecCCCcccEEEEe-eeEEeeeechhcccCc
Confidence 9955 59999996432 222334 5677889999999999997 9999999999999964 5899999999999988
Q ss_pred CCCcccccCccccccCCCCccCCC------------CCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhccccc
Q 004994 598 GSTNELSEGLLTAHGSGAPEFESG------------SYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRL 665 (720)
Q Consensus 598 ~~~~~~~~~~~~~~~~~aPE~~~~------------~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~ 665 (720)
..+........||..||+||.+.. .++.++||||+|||||+|+.|+.||....
T Consensus 512 DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~--------------- 576 (677)
T KOG0596|consen 512 DTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQII--------------- 576 (677)
T ss_pred cccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHH---------------
Confidence 888888888999999999997621 15679999999999999999999996421
Q ss_pred CchhhhhhhcCCCCCchhhHHH-HHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 666 HDIDALSRMVDPSLDGAYLAKS-LSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 666 ~~~~~~~~~~~~~~~~~~~~~~-~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
..+..+..+.+|...-.|+.-. ..++.++++.||.+||.+|||..|+|++
T Consensus 577 n~~aKl~aI~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqh 627 (677)
T KOG0596|consen 577 NQIAKLHAITDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQH 627 (677)
T ss_pred HHHHHHHhhcCCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcC
Confidence 0123455566665433333211 1238899999999999999999999975
No 180
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=2e-36 Score=315.73 Aligned_cols=264 Identities=25% Similarity=0.311 Sum_probs=202.8
Q ss_pred cCHHHHHHHhcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHcc-CCCceeEEEeEe
Q 004994 430 FTIASLQQYTNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRL-RHGNIVELIGYC 507 (720)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~ 507 (720)
+.++.+....++|+..+.||+|+||+||+|.. .+++.+|+|++... .....++..|+.+++++ +||||+++++++
T Consensus 8 ~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~---~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~ 84 (286)
T cd06638 8 IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPI---HDIDEEIEAEYNILKALSDHPNVVKFYGMY 84 (286)
T ss_pred EEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccc---cchHHHHHHHHHHHHHHhcCCCeeeeeeee
Confidence 34556667788999999999999999999955 56889999988642 22345678899999999 799999999987
Q ss_pred c-----cCCeEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCC
Q 004994 508 N-----EHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKL 582 (720)
Q Consensus 508 ~-----~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~ 582 (720)
. ..+..++||||+++++|.+++.........+++.....++.++++||.|||+. +++||||||+||++++++
T Consensus 85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~ 161 (286)
T cd06638 85 YKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVN---KTIHRDVKGNNILLTTEG 161 (286)
T ss_pred eecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhC---CccccCCCHHhEEECCCC
Confidence 3 34578999999999999998764322345678888999999999999999987 899999999999999999
Q ss_pred CeEEccccCCCCCCCCCCcccccCccccccCCCCccCC------CCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccc
Q 004994 583 IVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFES------GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQS 656 (720)
Q Consensus 583 ~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~------~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~ 656 (720)
.+||+|||+++.+.... .......++..|+|||.+. ..++.++|||||||++|||++|+.||.........
T Consensus 162 ~~kl~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~- 238 (286)
T cd06638 162 GVKLVDFGVSAQLTSTR--LRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRAL- 238 (286)
T ss_pred CEEEccCCceeecccCC--CccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHH-
Confidence 99999999987653321 1122345788999999862 34788999999999999999999999654321110
Q ss_pred hhhhcccccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q 004994 657 LVRWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDL 716 (720)
Q Consensus 657 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L 716 (720)
... .. ...+... .+......+.+++.+||+.||++|||+.|++++.
T Consensus 239 -~~~-----~~------~~~~~~~--~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~ 284 (286)
T cd06638 239 -FKI-----PR------NPPPTLH--QPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHV 284 (286)
T ss_pred -hhc-----cc------cCCCccc--CCCCcCHHHHHHHHHHccCCcccCCCHHHHhhcc
Confidence 000 00 0000000 0111234688999999999999999999999874
No 181
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=2.5e-36 Score=311.91 Aligned_cols=252 Identities=26% Similarity=0.414 Sum_probs=195.8
Q ss_pred CeeccCCCceEEEEEeCC-------CcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEe
Q 004994 446 NFIGEGLLGSVYKAELPG-------GKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYD 518 (720)
Q Consensus 446 ~~lg~G~~g~Vy~~~~~~-------g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 518 (720)
+.||+|+||.||+|...+ +..||+|.+.+... .....++.+|+++++.++||||+++++++...+..++|||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 79 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGAT-DQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIME 79 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccc-hhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEe
Confidence 368999999999996532 35799999865422 2345678899999999999999999999999999999999
Q ss_pred eCCCCCHHHHhhccch---hccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCC-----CeEEcccc
Q 004994 519 YGGNCTLHDLLHSDEE---AHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKL-----IVRVSDCG 590 (720)
Q Consensus 519 ~~~~gsL~~~l~~~~~---~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~-----~~kl~DFG 590 (720)
|+++++|.+++..... ....+++..+..++.+++.||+|||+. +++|+||||+||+++.+. .+|++|||
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg 156 (269)
T cd05044 80 LMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQM---HFIHRDLAARNCLVSEKGYDADRVVKIGDFG 156 (269)
T ss_pred ccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhC---CcccCCCChheEEEecCCCCCCcceEECCcc
Confidence 9999999999864321 224578899999999999999999987 899999999999999877 89999999
Q ss_pred CCCCCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcccccCch
Q 004994 591 LAPLLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDI 668 (720)
Q Consensus 591 la~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~ 668 (720)
+++.+..............+..|+|||+. .+.++.++|||||||++|||+| |+.||........ ...
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~---~~~-------- 225 (269)
T cd05044 157 LARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEV---LQH-------- 225 (269)
T ss_pred cccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHH---HHH--------
Confidence 99766433222222223345789999988 5678999999999999999998 9999964332111 000
Q ss_pred hhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q 004994 669 DALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLC 718 (720)
Q Consensus 669 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 718 (720)
+........+...+..+.+++.+||+.+|++||++++|++.|++
T Consensus 226 ------~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 269 (269)
T cd05044 226 ------VTAGGRLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQN 269 (269)
T ss_pred ------HhcCCccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 00000001112334678899999999999999999999999874
No 182
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=2.1e-36 Score=315.83 Aligned_cols=266 Identities=20% Similarity=0.262 Sum_probs=191.5
Q ss_pred CCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHcc---CCCceeEEEeEecc-----CC
Q 004994 441 SFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRL---RHGNIVELIGYCNE-----HG 511 (720)
Q Consensus 441 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l---~H~niv~l~~~~~~-----~~ 511 (720)
+|+..+.||+|+||+||+|.. .+|+.||+|.++...........+.+|+++++++ +||||+++++++.. ..
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 467788999999999999955 5789999999875433333334555666666655 79999999998854 34
Q ss_pred eEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccC
Q 004994 512 QHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGL 591 (720)
Q Consensus 512 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGl 591 (720)
..++||||+.+ +|.+++.... ...+++.....++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 81 ~~~lv~e~~~~-~l~~~~~~~~--~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~kl~dfg~ 154 (288)
T cd07863 81 KVTLVFEHVDQ-DLRTYLDKVP--PPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGQVKLADFGL 154 (288)
T ss_pred eEEEEEccccc-CHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccCc
Confidence 68999999985 8888875422 24588999999999999999999987 899999999999999999999999999
Q ss_pred CCCCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCcccc-chhhhcc-cccCch
Q 004994 592 APLLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQ-SLVRWAI-PRLHDI 668 (720)
Q Consensus 592 a~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~-~~~~~~~-~~~~~~ 668 (720)
++...... ......++..|+|||.. ...++.++|||||||++|||++|+.||......... .+..... +....+
T Consensus 155 ~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 231 (288)
T cd07863 155 ARIYSCQM---ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDW 231 (288)
T ss_pred cccccCcc---cCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhC
Confidence 98763221 12234567889999988 557899999999999999999999999654322111 0110000 000000
Q ss_pred hh----hhhhcCCCCC---chhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 669 DA----LSRMVDPSLD---GAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 669 ~~----~~~~~~~~~~---~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.. ......+... .........++.+++.+||+.||++|||+.|++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~h 285 (288)
T cd07863 232 PRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQH 285 (288)
T ss_pred cccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 00 0000000000 00111234567899999999999999999999875
No 183
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=6e-37 Score=333.19 Aligned_cols=252 Identities=22% Similarity=0.271 Sum_probs=192.8
Q ss_pred CCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccc-cccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEe
Q 004994 441 SFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTV-SQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYD 518 (720)
Q Consensus 441 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~-~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 518 (720)
.|+..+.||+|+||+||+|.. .+++.||+|++.+.. ......+.+.+|++++++++|+|||++++++.+.+..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 577889999999999999954 568999999987432 122344678899999999999999999999999999999999
Q ss_pred eCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCC
Q 004994 519 YGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSG 598 (720)
Q Consensus 519 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~ 598 (720)
|+++|+|.+++.. ...+++.....++.|++.||+|||+. +||||||||+|||++.++.+||+|||+++.+...
T Consensus 82 ~~~gg~L~~~l~~----~~~~~e~~~~~~~~qi~~al~~lH~~---~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~ 154 (382)
T cd05625 82 YIPGGDMMSLLIR----MGIFPEDLARFYIAELTCAVESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWT 154 (382)
T ss_pred CCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEeECCCCcccccc
Confidence 9999999998853 24577888888999999999999987 8999999999999999999999999997543110
Q ss_pred CC---------------------------------------------cccccCccccccCCCCccC-CCCCCCccchHhH
Q 004994 599 ST---------------------------------------------NELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSL 632 (720)
Q Consensus 599 ~~---------------------------------------------~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~ 632 (720)
.. ........|+..|+|||.+ ...++.++|||||
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSl 234 (382)
T cd05625 155 HDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSV 234 (382)
T ss_pred ccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEec
Confidence 00 0001124588999999998 5579999999999
Q ss_pred HHHHHHHHhCCCCCCCCCCcccc-chhhhcccccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCC---
Q 004994 633 GVVMLELLTGRKPYDRSRPRGEQ-SLVRWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPP--- 708 (720)
Q Consensus 633 Gvvl~elltG~~Pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt--- 708 (720)
||++|||+||+.||....+.... .+..|.. ...........+++.+++.+++ .+|++|++
T Consensus 235 Gvil~elltG~~Pf~~~~~~~~~~~i~~~~~---------------~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~ 298 (382)
T cd05625 235 GVILYEMLVGQPPFLAQTPLETQMKVINWQT---------------SLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNG 298 (382)
T ss_pred hHHHHHHHhCCCCCCCCCHHHHHHHHHccCC---------------CcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCC
Confidence 99999999999999754332111 1111100 0000000112356678888876 59999987
Q ss_pred HHHHHHH
Q 004994 709 MSEIVQD 715 (720)
Q Consensus 709 ~~evl~~ 715 (720)
++|+++|
T Consensus 299 ~~ei~~h 305 (382)
T cd05625 299 ADEIKAH 305 (382)
T ss_pred HHHHhcC
Confidence 8888764
No 184
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=1.5e-36 Score=320.45 Aligned_cols=266 Identities=19% Similarity=0.271 Sum_probs=197.4
Q ss_pred cCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEe
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYD 518 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 518 (720)
++|...+.||+|+||.||+|.. .+++.||+|+++.... ......+.+|++++++++||||+++++++...+..++|||
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 84 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHE-EGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFE 84 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeecccc-CCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEe
Confidence 4678889999999999999965 4688999999875432 2334567889999999999999999999999999999999
Q ss_pred eCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCC
Q 004994 519 YGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSG 598 (720)
Q Consensus 519 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~ 598 (720)
|+++ +|.+++... ...+++.....++.++++||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 85 ~~~~-~l~~~~~~~---~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 157 (309)
T cd07872 85 YLDK-DLKQYMDDC---GNIMSMHNVKIFLYQILRGLAYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAKSVP 157 (309)
T ss_pred CCCC-CHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECccccceecCCC
Confidence 9986 788777532 34578888899999999999999987 9999999999999999999999999999764322
Q ss_pred CCcccccCccccccCCCCccCC--CCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhccc--------ccCch
Q 004994 599 STNELSEGLLTAHGSGAPEFES--GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIP--------RLHDI 668 (720)
Q Consensus 599 ~~~~~~~~~~~~~~~~aPE~~~--~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~--------~~~~~ 668 (720)
.. ......++..|+|||... ..++.++|||||||++|||+||+.||......+....+..... .+...
T Consensus 158 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (309)
T cd07872 158 TK--TYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSN 235 (309)
T ss_pred cc--ccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcch
Confidence 11 112245678899999873 3589999999999999999999999976543222111111100 00000
Q ss_pred hhhhhhcCCCCCc----hhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 669 DALSRMVDPSLDG----AYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 669 ~~~~~~~~~~~~~----~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
......-.+.... ........++.+++.+||+.||.+|||++|++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 286 (309)
T cd07872 236 DEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKH 286 (309)
T ss_pred hhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcC
Confidence 0000000000000 0011234567899999999999999999999874
No 185
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=3e-36 Score=311.46 Aligned_cols=253 Identities=25% Similarity=0.340 Sum_probs=188.6
Q ss_pred eeccCCCceEEEEEeCC---CcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEeeCCCC
Q 004994 447 FIGEGLLGSVYKAELPG---GKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDYGGNC 523 (720)
Q Consensus 447 ~lg~G~~g~Vy~~~~~~---g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~g 523 (720)
.||+|+||+||+|...+ ...+|+|.+.... .......|.+|++.++.++|+||+++++++.+.+..++||||+++|
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASA-TPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLG 80 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccC-ChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCC
Confidence 58999999999996533 4578888876432 2334467889999999999999999999999999999999999999
Q ss_pred CHHHHhhccchh-ccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCCCcc
Q 004994 524 TLHDLLHSDEEA-HKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNE 602 (720)
Q Consensus 524 sL~~~l~~~~~~-~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~~ 602 (720)
+|.+++...... ....++.....++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++.........
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~ 157 (269)
T cd05042 81 DLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQA---DFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYI 157 (269)
T ss_pred cHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhc---CEecccccHhheEecCCCcEEEeccccccccccchhee
Confidence 999998654321 23456778889999999999999987 89999999999999999999999999987543322211
Q ss_pred cccCccccccCCCCccCC--------CCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccc-hhhhcccccCchhhhh
Q 004994 603 LSEGLLTAHGSGAPEFES--------GSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQS-LVRWAIPRLHDIDALS 672 (720)
Q Consensus 603 ~~~~~~~~~~~~aPE~~~--------~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~-~~~~~~~~~~~~~~~~ 672 (720)
......++..|+|||+.. ..++.++|||||||++|||++ |+.||....+..... .+.... .
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~---------~ 228 (269)
T cd05042 158 TKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQD---------I 228 (269)
T ss_pred ccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccC---------c
Confidence 222334456799999752 246889999999999999999 888986543221100 000000 0
Q ss_pred hhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 004994 673 RMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLL 717 (720)
Q Consensus 673 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 717 (720)
...++.. ....+..+.+++..|+ .||++|||++||++.|.
T Consensus 229 ~~~~~~~----~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 229 KLPKPQL----DLKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred cCCCCcc----cccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 0111111 1223456678889998 59999999999998763
No 186
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=4.1e-36 Score=313.09 Aligned_cols=271 Identities=18% Similarity=0.287 Sum_probs=200.4
Q ss_pred CCCCCCeeccCCCceEEEEEe-----CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccC--CeE
Q 004994 441 SFSEGNFIGEGLLGSVYKAEL-----PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEH--GQH 513 (720)
Q Consensus 441 ~~~~~~~lg~G~~g~Vy~~~~-----~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~--~~~ 513 (720)
.|...+.||+|+||.||++.. .++..||+|.++... .....+.+.+|+++++.++||||+++++++.+. ...
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES-GGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 83 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccc-cHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCce
Confidence 467788999999999999964 357899999987543 233456789999999999999999999998765 568
Q ss_pred EEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCC
Q 004994 514 LLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAP 593 (720)
Q Consensus 514 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~ 593 (720)
++||||+++++|.+++... ...++|..+..++.+++.||+|||+. +++||||||+||+++.++.+||+|||+++
T Consensus 84 ~lv~e~~~g~~L~~~l~~~---~~~~~~~~~~~i~~~i~~aL~~lH~~---gi~H~dlkp~Nil~~~~~~~~l~dfg~~~ 157 (284)
T cd05079 84 KLIMEFLPSGSLKEYLPRN---KNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTK 157 (284)
T ss_pred EEEEEccCCCCHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccchheEEEcCCCCEEECCCcccc
Confidence 9999999999999998532 23588999999999999999999987 99999999999999999999999999998
Q ss_pred CCCCCCCc-ccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhh
Q 004994 594 LLFSGSTN-ELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDAL 671 (720)
Q Consensus 594 ~~~~~~~~-~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (720)
.+...... .......++..|+|||.. .+.++.++|||||||++|||+|++.|+....... .................
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 236 (284)
T cd05079 158 AIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLF-LKMIGPTHGQMTVTRLV 236 (284)
T ss_pred ccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchh-hhhcccccccccHHHHH
Confidence 76432211 112234456679999987 4578999999999999999999887653321100 00000000000000000
Q ss_pred hhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhC
Q 004994 672 SRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCMI 720 (720)
Q Consensus 672 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~ 720 (720)
..+.+.. ....+...+..+.+++.+||+.+|++|||++++++.|++++
T Consensus 237 ~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~~ 284 (284)
T cd05079 237 RVLEEGK-RLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAIL 284 (284)
T ss_pred HHHHcCc-cCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhhC
Confidence 0000000 00011223467899999999999999999999999999875
No 187
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=5.7e-36 Score=307.17 Aligned_cols=248 Identities=26% Similarity=0.337 Sum_probs=193.2
Q ss_pred CeeccCCCceEEEEEeC--C--CcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEeeCC
Q 004994 446 NFIGEGLLGSVYKAELP--G--GKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDYGG 521 (720)
Q Consensus 446 ~~lg~G~~g~Vy~~~~~--~--g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~ 521 (720)
+.||+|+||.||+|... + +..||+|.+...... ...+++.+|++++++++|+||+++++++.. +..++||||++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~ 78 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA-AGKKEFLREASVMAQLDHPCIVRLIGVCKG-EPLMLVMELAP 78 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccch-HHHHHHHHHHHHHHhcCCCCeeeEEEEEcC-CceEEEEEeCC
Confidence 46999999999999542 2 368999999755432 345678999999999999999999998864 46899999999
Q ss_pred CCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCCCc
Q 004994 522 NCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTN 601 (720)
Q Consensus 522 ~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~ 601 (720)
+++|.+++... ..+++..+..++.++++||+|||.. +++||||||+|||++.++.+||+|||+++.+......
T Consensus 79 ~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~ 151 (257)
T cd05060 79 LGPLLKYLKKR----REIPVSDLKELAHQVAMGMAYLESK---HFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDY 151 (257)
T ss_pred CCcHHHHHHhC----CCCCHHHHHHHHHHHHHHHHHHhhc---CeeccCcccceEEEcCCCcEEeccccccceeecCCcc
Confidence 99999998642 3688999999999999999999987 8999999999999999999999999999876433221
Q ss_pred cc-ccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcccccCchhhhhhhcCCC
Q 004994 602 EL-SEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPS 678 (720)
Q Consensus 602 ~~-~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (720)
.. .....++..|+|||.. .+.++.++|||||||++|||++ |+.||....... ...+....
T Consensus 152 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~---~~~~~~~~-------------- 214 (257)
T cd05060 152 YRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAE---VIAMLESG-------------- 214 (257)
T ss_pred cccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHH---HHHHHHcC--------------
Confidence 11 1111224579999988 5578999999999999999998 999997543211 11111000
Q ss_pred CCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 679 LDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 679 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
.....+...+..+.+++.+||+.+|++||++.++++.|+++
T Consensus 215 ~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 255 (257)
T cd05060 215 ERLPRPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRD 255 (257)
T ss_pred CcCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhc
Confidence 00001122345788999999999999999999999999874
No 188
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=3.7e-37 Score=334.20 Aligned_cols=253 Identities=22% Similarity=0.271 Sum_probs=194.6
Q ss_pred cCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccc-cccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTV-SQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVY 517 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~-~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 517 (720)
++|+..+.||+|+||+||+|+. .+++.||||++.+.. ......+.+.+|++++++++|+||+++++.+.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 80 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence 3688889999999999999964 568999999986432 12234466889999999999999999999999999999999
Q ss_pred eeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCC
Q 004994 518 DYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFS 597 (720)
Q Consensus 518 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~ 597 (720)
||+++|+|.+++.. ...++......++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+|..+..
T Consensus 81 E~~~~g~L~~~i~~----~~~~~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~ 153 (376)
T cd05598 81 DYIPGGDMMSLLIR----LGIFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRW 153 (376)
T ss_pred eCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHEEECCCCCEEEEeCCCCccccc
Confidence 99999999999853 24577888888999999999999987 999999999999999999999999999853310
Q ss_pred CCC-----------------------------------------cccccCccccccCCCCccC-CCCCCCccchHhHHHH
Q 004994 598 GST-----------------------------------------NELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVV 635 (720)
Q Consensus 598 ~~~-----------------------------------------~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvv 635 (720)
... ........|++.|+|||.+ ...++.++|||||||+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvi 233 (376)
T cd05598 154 THDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVI 233 (376)
T ss_pred cccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccce
Confidence 000 0001134688999999998 4568999999999999
Q ss_pred HHHHHhCCCCCCCCCCccccc-hhhhcccccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCC---CHHH
Q 004994 636 MLELLTGRKPYDRSRPRGEQS-LVRWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRP---PMSE 711 (720)
Q Consensus 636 l~elltG~~Pf~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP---t~~e 711 (720)
+|||+||+.||.......... +..|.. ............++.+++.+|+ .+|.+|+ ++.|
T Consensus 234 lyell~G~~Pf~~~~~~~~~~~i~~~~~---------------~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~e 297 (376)
T cd05598 234 LYEMLVGQPPFLADTPAETQLKVINWET---------------TLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADE 297 (376)
T ss_pred eeehhhCCCCCCCCCHHHHHHHHhccCc---------------cccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHH
Confidence 999999999997644322111 111100 0000001112356678888876 5999999 8999
Q ss_pred HHHH
Q 004994 712 IVQD 715 (720)
Q Consensus 712 vl~~ 715 (720)
++++
T Consensus 298 ll~h 301 (376)
T cd05598 298 IKAH 301 (376)
T ss_pred HhCC
Confidence 9875
No 189
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=4.4e-36 Score=308.69 Aligned_cols=254 Identities=28% Similarity=0.420 Sum_probs=202.4
Q ss_pred hcCCCCCCeeccCCCceEEEEEeCCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEe
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYD 518 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 518 (720)
.++|...+.||+|+||.||+|..++++.||||.+.... ...+++.+|++++++++|+||+++++++......++|||
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 81 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGT---MSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTE 81 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCc---cCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEe
Confidence 45788889999999999999988788899999987532 345678999999999999999999999998889999999
Q ss_pred eCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCC
Q 004994 519 YGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSG 598 (720)
Q Consensus 519 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~ 598 (720)
|+++++|.+++.... ...+++..+..++.+++.|+.|||+. +++|+||||+||++++++.+||+|||+++.+...
T Consensus 82 ~~~~~~L~~~i~~~~--~~~~~~~~~~~~~~~i~~al~~lh~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~ 156 (261)
T cd05034 82 YMSKGSLLDFLKSGE--GKKLRLPQLVDMAAQIAEGMAYLESR---NYIHRDLAARNILVGENLVCKIADFGLARLIEDD 156 (261)
T ss_pred ccCCCCHHHHHhccc--cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcchheEEEcCCCCEEECccccceeccch
Confidence 999999999986532 34688999999999999999999987 8999999999999999999999999999766432
Q ss_pred CCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcccccCchhhhhhhcC
Q 004994 599 STNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVD 676 (720)
Q Consensus 599 ~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (720)
.. ........+..|+|||.. .+.++.++|||||||++||++| |+.||........ ..... ....
T Consensus 157 ~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~---~~~~~----------~~~~ 222 (261)
T cd05034 157 EY-TAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREV---LEQVE----------RGYR 222 (261)
T ss_pred hh-hhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHH---HHHHH----------cCCC
Confidence 11 111122234579999988 4568999999999999999999 9999965332111 11000 0000
Q ss_pred CCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q 004994 677 PSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLC 718 (720)
Q Consensus 677 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 718 (720)
.. .+...+.++.+++.+|++.+|++||+++++.+.|+.
T Consensus 223 ~~----~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 223 MP----RPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred CC----CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 00 011124578899999999999999999999999875
No 190
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=4e-36 Score=312.85 Aligned_cols=270 Identities=22% Similarity=0.306 Sum_probs=202.3
Q ss_pred CCCCCCeeccCCCceEEEEEeC-----CCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEecc--CCeE
Q 004994 441 SFSEGNFIGEGLLGSVYKAELP-----GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNE--HGQH 513 (720)
Q Consensus 441 ~~~~~~~lg~G~~g~Vy~~~~~-----~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~--~~~~ 513 (720)
.|...+.||+|+||.||+|.+. ++..||||++...... ...+.|.+|+++++.++|+||+++++++.. ....
T Consensus 5 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05038 5 HLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE-QHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSL 83 (284)
T ss_pred hchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch-HHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCce
Confidence 4666789999999999999753 3689999999754332 346789999999999999999999999877 5578
Q ss_pred EEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCC
Q 004994 514 LLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAP 593 (720)
Q Consensus 514 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~ 593 (720)
++||||+++++|.+++... ...+++..+..++.+++.||+|||+. +++||||||+||+++.++.+||+|||++.
T Consensus 84 ~lv~e~~~~~~l~~~l~~~---~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~ 157 (284)
T cd05038 84 RLIMEYLPSGSLRDYLQRH---RDQINLKRLLLFSSQICKGMDYLGSQ---RYIHRDLAARNILVESEDLVKISDFGLAK 157 (284)
T ss_pred EEEEecCCCCCHHHHHHhC---ccccCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEccccccc
Confidence 9999999999999998643 23589999999999999999999987 89999999999999999999999999998
Q ss_pred CCCCCCCc-ccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhh
Q 004994 594 LLFSGSTN-ELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDAL 671 (720)
Q Consensus 594 ~~~~~~~~-~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (720)
........ ...........|++||.. ...++.++||||||+++|||+||+.|+......... ..... ........+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~-~~~~~-~~~~~~~~~ 235 (284)
T cd05038 158 VLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLR-MIGIA-QGQMIVTRL 235 (284)
T ss_pred ccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhcc-ccccc-cccccHHHH
Confidence 76532211 111122334568999987 557899999999999999999999998643221100 00000 000001111
Q ss_pred hhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 672 SRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 672 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
.+.+........+..++.++.+++.+||+.+|++||||.||+++|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 236 LELLKEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred HHHHHcCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 111111111111223346789999999999999999999999999986
No 191
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=4.1e-36 Score=309.16 Aligned_cols=256 Identities=22% Similarity=0.293 Sum_probs=201.9
Q ss_pred CCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEecc--CCeEEEEE
Q 004994 441 SFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNE--HGQHLLVY 517 (720)
Q Consensus 441 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~--~~~~~lv~ 517 (720)
+|+..+.||.|+||.||++.. .+++.||+|++..........+.+..|++++++++|+||+++++++.. ....+++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 467788999999999999954 578999999987544444555778899999999999999999998753 45689999
Q ss_pred eeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcC--CCCeeecCCCCCCeEEcCCCCeEEccccCCCCC
Q 004994 518 DYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVC--EPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLL 595 (720)
Q Consensus 518 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~--~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~ 595 (720)
||+++++|.+++.........+++.....++.++++||.|||..+ ..+++|+||||+||++++++.+||+|||++...
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~ 160 (265)
T cd08217 81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKIL 160 (265)
T ss_pred hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccc
Confidence 999999999998654333567899999999999999999999443 459999999999999999999999999999876
Q ss_pred CCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhh
Q 004994 596 FSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRM 674 (720)
Q Consensus 596 ~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (720)
..... ......++..|+|||.. ...++.++||||||+++|+|++|+.||....... ..+..
T Consensus 161 ~~~~~--~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~---~~~~~------------- 222 (265)
T cd08217 161 GHDSS--FAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQ---LASKI------------- 222 (265)
T ss_pred cCCcc--cccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHHH---HHHHH-------------
Confidence 43321 12234578889999998 4568899999999999999999999997543111 11100
Q ss_pred cCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 675 VDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 675 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
... .....+...+..+.+++.+|++.+|++||++++|+++
T Consensus 223 ~~~-~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 223 KEG-KFRRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred hcC-CCCCCccccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 000 0011122334678899999999999999999999975
No 192
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-36 Score=320.43 Aligned_cols=253 Identities=22% Similarity=0.309 Sum_probs=209.7
Q ss_pred HhcCCCCCCeeccCCCceEEEEEeC-CCcEEEEEEecccccc-cccHHHHHHHHHHHHccC-CCceeEEEeEeccCCeEE
Q 004994 438 YTNSFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQ-RQTDEEFLELASTISRLR-HGNIVELIGYCNEHGQHL 514 (720)
Q Consensus 438 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~-~~~~~~~~~e~~~l~~l~-H~niv~l~~~~~~~~~~~ 514 (720)
....|...+.||+|.||.||++..+ +|+.+|+|.+.+.... ....+...+|+++|+++. |||||.++++|++....+
T Consensus 33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~ 112 (382)
T KOG0032|consen 33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVY 112 (382)
T ss_pred ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEE
Confidence 4456888899999999999999654 5999999999765432 234578899999999998 999999999999999999
Q ss_pred EEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCC----CCeEEcccc
Q 004994 515 LVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEK----LIVRVSDCG 590 (720)
Q Consensus 515 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~----~~~kl~DFG 590 (720)
+|||++.+|.|.+.+... .++......++.+++.++.|+|+. +||||||||+|+|+... +.+|++|||
T Consensus 113 lvmEL~~GGeLfd~i~~~-----~~sE~da~~~~~~il~av~~lH~~---gvvHrDlKpEN~L~~~~~~~~~~ik~~DFG 184 (382)
T KOG0032|consen 113 LVMELCEGGELFDRIVKK-----HYSERDAAGIIRQILEAVKYLHSL---GVVHRDLKPENLLLASKDEGSGRIKLIDFG 184 (382)
T ss_pred EEEEecCCchHHHHHHHc-----cCCHHHHHHHHHHHHHHHHHHHhC---CceeccCCHHHeeeccccCCCCcEEEeeCC
Confidence 999999999999998643 288999999999999999999997 99999999999999643 479999999
Q ss_pred CCCCCCCCCCcccccCccccccCCCCccCC-CCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchh
Q 004994 591 LAPLLFSGSTNELSEGLLTAHGSGAPEFES-GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDID 669 (720)
Q Consensus 591 la~~~~~~~~~~~~~~~~~~~~~~aPE~~~-~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 669 (720)
+|..... ........||++|+|||... ..|+..+||||+||++|.|+.|..||...........+..
T Consensus 185 la~~~~~---~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~--------- 252 (382)
T KOG0032|consen 185 LAKFIKP---GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILR--------- 252 (382)
T ss_pred CceEccC---CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHc---------
Confidence 9998754 33455688999999999996 6899999999999999999999999976543222111100
Q ss_pred hhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 670 ALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 670 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.+......+.......+.+++.+|+..||.+|+|+.++++|
T Consensus 253 -----~~~~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~H 293 (382)
T KOG0032|consen 253 -----GDFDFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQH 293 (382)
T ss_pred -----CCCCCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcC
Confidence 01122233444556788999999999999999999999986
No 193
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=3.9e-36 Score=313.25 Aligned_cols=268 Identities=18% Similarity=0.279 Sum_probs=198.3
Q ss_pred CCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEee
Q 004994 441 SFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDY 519 (720)
Q Consensus 441 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 519 (720)
+|+..+.||+|++|.||+|.. .+++.||+|++..........+.+.+|+.++++++||||+++++++.+++..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF 80 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence 467788999999999999965 4689999999875443344456788999999999999999999999999999999999
Q ss_pred CCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCC
Q 004994 520 GGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGS 599 (720)
Q Consensus 520 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~ 599 (720)
++ ++|.+++.... ....+++.....++.|+++||+|||+. +++||||||+||+++.++.+||+|||++.......
T Consensus 81 ~~-~~l~~~~~~~~-~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 155 (285)
T cd07861 81 LS-MDLKKYLDSLP-KGQYMDAELVKSYLYQILQGILFCHSR---RVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPV 155 (285)
T ss_pred CC-CCHHHHHhcCC-CCCcCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEEcCCCcEEECcccceeecCCCc
Confidence 98 58888875432 235688999999999999999999987 99999999999999999999999999987653221
Q ss_pred CcccccCccccccCCCCccCC--CCCCCccchHhHHHHHHHHHhCCCCCCCCCCcccc-chhhhc-c------cccCchh
Q 004994 600 TNELSEGLLTAHGSGAPEFES--GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQ-SLVRWA-I------PRLHDID 669 (720)
Q Consensus 600 ~~~~~~~~~~~~~~~aPE~~~--~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~-~~~~~~-~------~~~~~~~ 669 (720)
.......++..|+|||... ..++.++|||||||++|||+||+.||......... ...+.. . +......
T Consensus 156 --~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (285)
T cd07861 156 --RVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLP 233 (285)
T ss_pred --ccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhH
Confidence 1112234577899999873 34789999999999999999999999754321110 000000 0 0000001
Q ss_pred hhhhhcCCCCCc---hhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 670 ALSRMVDPSLDG---AYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 670 ~~~~~~~~~~~~---~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
......+..... ......+.++.+++.+||+.||++|||+.+|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~ 282 (285)
T cd07861 234 DYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNH 282 (285)
T ss_pred HHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 111111100000 0011234677899999999999999999999864
No 194
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=2.4e-36 Score=312.63 Aligned_cols=252 Identities=24% Similarity=0.370 Sum_probs=195.5
Q ss_pred HhcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHcc-CCCceeEEEeEeccC-----
Q 004994 438 YTNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRL-RHGNIVELIGYCNEH----- 510 (720)
Q Consensus 438 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~----- 510 (720)
+++.|+..+.||+|+||.||+|.. .+++.||+|++... ......+..|+.+++++ +|+||+++++++...
T Consensus 4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~---~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~ 80 (272)
T cd06637 4 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVT---GDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGM 80 (272)
T ss_pred hhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcC---CccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCC
Confidence 456778888999999999999965 46889999998643 23345778899999998 799999999998642
Q ss_pred -CeEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccc
Q 004994 511 -GQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDC 589 (720)
Q Consensus 511 -~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DF 589 (720)
...++||||+++++|.+++... ....+++.....++.|++.||+|||+. +|+||||||+||++++++.+||+||
T Consensus 81 ~~~~~iv~e~~~~~~L~~~l~~~--~~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivh~dl~~~nili~~~~~~~l~Df 155 (272)
T cd06637 81 DDQLWLVMEFCGAGSVTDLIKNT--KGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDF 155 (272)
T ss_pred CcEEEEEEEcCCCCcHHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHEEECCCCCEEEccC
Confidence 4689999999999999998642 234688999999999999999999987 8999999999999999999999999
Q ss_pred cCCCCCCCCCCcccccCccccccCCCCccCC------CCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhccc
Q 004994 590 GLAPLLFSGSTNELSEGLLTAHGSGAPEFES------GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIP 663 (720)
Q Consensus 590 Gla~~~~~~~~~~~~~~~~~~~~~~aPE~~~------~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~ 663 (720)
|+++...... .......++..|+|||++. ..++.++|||||||++|||++|+.||............
T Consensus 156 g~~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~----- 228 (272)
T cd06637 156 GVSAQLDRTV--GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLI----- 228 (272)
T ss_pred CCceeccccc--ccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHH-----
Confidence 9997653221 1223355788899999873 24788999999999999999999999643321111000
Q ss_pred ccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 664 RLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 664 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.....+.. .....+.++.+++.+||+.+|.+|||+.|++++
T Consensus 229 --------~~~~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 269 (272)
T cd06637 229 --------PRNPAPRL---KSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKH 269 (272)
T ss_pred --------hcCCCCCC---CCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhC
Confidence 00000000 011233568899999999999999999999874
No 195
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=9.5e-36 Score=303.80 Aligned_cols=264 Identities=27% Similarity=0.415 Sum_probs=198.5
Q ss_pred CCeeccCCCceEEEEEeCCCcEEEEEEecccccccccHHHHHHHHHHHHc--cCCCceeEEEeEeccCC----eEEEEEe
Q 004994 445 GNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISR--LRHGNIVELIGYCNEHG----QHLLVYD 518 (720)
Q Consensus 445 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~--l~H~niv~l~~~~~~~~----~~~lv~e 518 (720)
.++||+|.||+||||.+.+ +.||||++.. ...+.|..|-++.+. ++|+||++++++-.... +++||++
T Consensus 215 ~eli~~Grfg~V~KaqL~~-~~VAVKifp~-----~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt~ 288 (534)
T KOG3653|consen 215 LELIGRGRFGCVWKAQLDN-RLVAVKIFPE-----QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVTE 288 (534)
T ss_pred HHHhhcCccceeehhhccC-ceeEEEecCH-----HHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEee
Confidence 4679999999999999854 8999999963 445678888777654 48999999999876544 8999999
Q ss_pred eCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcC------CCCeeecCCCCCCeEEcCCCCeEEccccCC
Q 004994 519 YGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVC------EPPIVHGNFKSSNILLDEKLIVRVSDCGLA 592 (720)
Q Consensus 519 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~------~~~ivHrDlkp~NiLl~~~~~~kl~DFGla 592 (720)
|.+.|+|.++|. ...++|....+|+..+++||+|||+.+ .++|+|||||++|||+..|++..|+|||+|
T Consensus 289 fh~kGsL~dyL~-----~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLA 363 (534)
T KOG3653|consen 289 FHPKGSLCDYLK-----ANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLA 363 (534)
T ss_pred eccCCcHHHHHH-----hccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeecccee
Confidence 999999999995 356899999999999999999999754 678999999999999999999999999999
Q ss_pred CCCCCCCCcccccCccccccCCCCccCCCCCC-------CccchHhHHHHHHHHHhCCCCCCC-CCCccccchhhh--cc
Q 004994 593 PLLFSGSTNELSEGLLTAHGSGAPEFESGSYS-------CQSDVYSLGVVMLELLTGRKPYDR-SRPRGEQSLVRW--AI 662 (720)
Q Consensus 593 ~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~-------~~~Dv~S~Gvvl~elltG~~Pf~~-~~~~~~~~~~~~--~~ 662 (720)
..+..+....-.....||..|||||++.|..+ .+.||||+|.|||||+++-.-+.. ..+.-..-+... ..
T Consensus 364 l~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~h 443 (534)
T KOG3653|consen 364 LRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNH 443 (534)
T ss_pred EEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCC
Confidence 98876655545556889999999999865432 258999999999999986544321 111000000000 00
Q ss_pred cccCchh--hhhhhcCCCCCch-hhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 663 PRLHDID--ALSRMVDPSLDGA-YLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 663 ~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
|.+.+-. .+++-..|.++.. .....+..+++.+..||..||+.|.|+.=|-+++.+|
T Consensus 444 Pt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l 503 (534)
T KOG3653|consen 444 PTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAEL 503 (534)
T ss_pred CCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHH
Confidence 1111100 1112222333221 1123456789999999999999999999998888776
No 196
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-36 Score=288.04 Aligned_cols=244 Identities=24% Similarity=0.431 Sum_probs=190.2
Q ss_pred CCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHcc-CCCceeEEEeEeccCCeEEEEEeeCCC
Q 004994 445 GNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRL-RHGNIVELIGYCNEHGQHLLVYDYGGN 522 (720)
Q Consensus 445 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv~e~~~~ 522 (720)
...||.|+.|.|+++++ .+|..+|||.+.+.. .....+.++..++++.+- +.|+||+.+|||..+...++.||.|.-
T Consensus 97 l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~-Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelMs~ 175 (391)
T KOG0983|consen 97 LGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTG-NKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELMST 175 (391)
T ss_pred HHhhcCCCccceEEEEEcccceEEEEEeecccC-CHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHHHH
Confidence 45699999999999965 568999999998653 234445566666666555 489999999999988888999998865
Q ss_pred CCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCCCcc
Q 004994 523 CTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNE 602 (720)
Q Consensus 523 gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~~ 602 (720)
+ +..++. ...+++++...-++...+..||.||.+.| +|||||+||+|||+|+.|++|+||||++-.+.++..+
T Consensus 176 C-~ekLlk---rik~piPE~ilGk~tva~v~AL~YLKeKH--~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkAh- 248 (391)
T KOG0983|consen 176 C-AEKLLK---RIKGPIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKAH- 248 (391)
T ss_pred H-HHHHHH---HhcCCchHHhhhhhHHHHHHHHHHHHHhc--ceeecccCccceEEccCCCEEeecccccceeeccccc-
Confidence 3 344443 23456888888899999999999999986 8999999999999999999999999999887654433
Q ss_pred cccCccccccCCCCccCCC----CCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcC--
Q 004994 603 LSEGLLTAHGSGAPEFESG----SYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVD-- 676 (720)
Q Consensus 603 ~~~~~~~~~~~~aPE~~~~----~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 676 (720)
....|-+.|||||.+.. .|+.++|||||||.++||.||+.||...+.+ .+.+..+++
T Consensus 249 --trsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~td---------------Fe~ltkvln~e 311 (391)
T KOG0983|consen 249 --TRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTD---------------FEVLTKVLNEE 311 (391)
T ss_pred --ccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCcc---------------HHHHHHHHhcC
Confidence 23456678999999843 4899999999999999999999999763321 122222222
Q ss_pred -CCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 677 -PSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 677 -~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
|.+++.. ..++.|++++..||.+|+.+||.+.++++|
T Consensus 312 PP~L~~~~--gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h 349 (391)
T KOG0983|consen 312 PPLLPGHM--GFSPDFQSFVKDCLTKDHRKRPKYNKLLEH 349 (391)
T ss_pred CCCCCccc--CcCHHHHHHHHHHhhcCcccCcchHHHhcC
Confidence 3333221 145789999999999999999999999875
No 197
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=2.1e-36 Score=326.76 Aligned_cols=265 Identities=18% Similarity=0.223 Sum_probs=196.0
Q ss_pred HhcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccC------
Q 004994 438 YTNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEH------ 510 (720)
Q Consensus 438 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~------ 510 (720)
..++|...+.||+|+||.||+|.. ..++.||||++............+.+|+.+++.++||||+++++++...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence 356888999999999999999954 5688999999976544444556788999999999999999999987543
Q ss_pred CeEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEcccc
Q 004994 511 GQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCG 590 (720)
Q Consensus 511 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFG 590 (720)
...++||||+++ +|.+.+. ..+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 102 ~~~~lv~e~~~~-~l~~~~~------~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG 171 (364)
T cd07875 102 QDVYIVMELMDA-NLCQVIQ------MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 171 (364)
T ss_pred CeEEEEEeCCCC-CHHHHHH------hcCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEECCCCcEEEEeCC
Confidence 357999999976 6766663 2477888899999999999999987 99999999999999999999999999
Q ss_pred CCCCCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccc-cCc-
Q 004994 591 LAPLLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPR-LHD- 667 (720)
Q Consensus 591 la~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~-~~~- 667 (720)
+++..... .......++..|+|||.+ ...++.++|||||||++|||++|+.||...+.......+...... ..+
T Consensus 172 ~a~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 248 (364)
T cd07875 172 LARTAGTS---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEF 248 (364)
T ss_pred CccccCCC---CcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHH
Confidence 99865322 122335678899999998 557899999999999999999999999754432211110000000 000
Q ss_pred hhh-------------------hhhhcCCCC---CchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 668 IDA-------------------LSRMVDPSL---DGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 668 ~~~-------------------~~~~~~~~~---~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
... ......... ..........++.+++.+||+.||.+|||+.|++++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~h 318 (364)
T cd07875 249 MKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318 (364)
T ss_pred HHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 000 000000000 000011123467899999999999999999999975
No 198
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-37 Score=322.20 Aligned_cols=245 Identities=27% Similarity=0.397 Sum_probs=200.1
Q ss_pred CCCCCeeccCCCceEEEEE-eCCCcEEEEEEeccccc-ccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEee
Q 004994 442 FSEGNFIGEGLLGSVYKAE-LPGGKLLAVKKLSNTVS-QRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDY 519 (720)
Q Consensus 442 ~~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 519 (720)
|...+-||.|+||.||-|+ ..+...||||++.-... ......++..|++.|++++|||+|.+.|+|......||||||
T Consensus 28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEY 107 (948)
T KOG0577|consen 28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEY 107 (948)
T ss_pred HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHH
Confidence 4556789999999999994 56789999999974322 223346789999999999999999999999988899999999
Q ss_pred CCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCC
Q 004994 520 GGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGS 599 (720)
Q Consensus 520 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~ 599 (720)
|-| |-.|++. -.++++....+..|..|+..||+|||+. +.||||||+-|||+++.|.|||+|||.|.++.+..
T Consensus 108 ClG-SAsDlle---VhkKplqEvEIAAi~~gaL~gLaYLHS~---~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PAn 180 (948)
T KOG0577|consen 108 CLG-SASDLLE---VHKKPLQEVEIAAITHGALQGLAYLHSH---NRIHRDIKAGNILLSEPGLVKLADFGSASIMAPAN 180 (948)
T ss_pred Hhc-cHHHHHH---HHhccchHHHHHHHHHHHHHHHHHHHHh---hHHhhhccccceEecCCCeeeeccccchhhcCchh
Confidence 975 7778774 3456788888999999999999999997 89999999999999999999999999998775433
Q ss_pred CcccccCccccccCCCCccC----CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhc
Q 004994 600 TNELSEGLLTAHGSGAPEFE----SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMV 675 (720)
Q Consensus 600 ~~~~~~~~~~~~~~~aPE~~----~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (720)
.++||++|||||++ .|.|+-|+||||+|+...|+...++|+...+...... .+...-
T Consensus 181 ------sFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALY-------------HIAQNe 241 (948)
T KOG0577|consen 181 ------SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALY-------------HIAQNE 241 (948)
T ss_pred ------cccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHH-------------HHHhcC
Confidence 37899999999987 4789999999999999999999999986543221111 011111
Q ss_pred CCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 676 DPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 676 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.|.+. ..+++..|+.|+..||++-|.+|||.+++++|
T Consensus 242 sPtLq---s~eWS~~F~~Fvd~CLqKipqeRptse~ll~H 278 (948)
T KOG0577|consen 242 SPTLQ---SNEWSDYFRNFVDSCLQKIPQERPTSEELLKH 278 (948)
T ss_pred CCCCC---CchhHHHHHHHHHHHHhhCcccCCcHHHHhhc
Confidence 22222 34566789999999999999999999999876
No 199
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=1.2e-36 Score=327.61 Aligned_cols=266 Identities=18% Similarity=0.223 Sum_probs=196.2
Q ss_pred HHhcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccC-----
Q 004994 437 QYTNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEH----- 510 (720)
Q Consensus 437 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~----- 510 (720)
...++|...+.||+|+||.||++.. ..++.||||++..........+.+.+|+.+++.++||||+++++++...
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 93 (355)
T cd07874 14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEE 93 (355)
T ss_pred hhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccc
Confidence 3457899999999999999999954 5689999999976544444556788999999999999999999988543
Q ss_pred -CeEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccc
Q 004994 511 -GQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDC 589 (720)
Q Consensus 511 -~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DF 589 (720)
...++||||+++ ++.+.+. ..+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+||
T Consensus 94 ~~~~~lv~e~~~~-~l~~~~~------~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDikp~Nill~~~~~~kl~Df 163 (355)
T cd07874 94 FQDVYLVMELMDA-NLCQVIQ------MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDF 163 (355)
T ss_pred cceeEEEhhhhcc-cHHHHHh------hcCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEECCCCCEEEeeC
Confidence 357999999976 5666553 2477888889999999999999987 9999999999999999999999999
Q ss_pred cCCCCCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccc-hhhhcccccCc
Q 004994 590 GLAPLLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQS-LVRWAIPRLHD 667 (720)
Q Consensus 590 Gla~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~-~~~~~~~~~~~ 667 (720)
|+++..... .......++..|+|||.. ...++.++|||||||++|||++|+.||.......... .+........+
T Consensus 164 g~~~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 240 (355)
T cd07874 164 GLARTAGTS---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPE 240 (355)
T ss_pred cccccCCCc---cccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHH
Confidence 999865322 122335678899999998 4568999999999999999999999997543211100 00000000000
Q ss_pred -h----hhhhhhcC----------------CCC--CchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 668 -I----DALSRMVD----------------PSL--DGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 668 -~----~~~~~~~~----------------~~~--~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
. .....+++ ... ..........++.+++.+||+.||++|||+.|++++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h 311 (355)
T cd07874 241 FMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH 311 (355)
T ss_pred HHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence 0 00000000 000 000111224567899999999999999999999986
No 200
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=7.5e-36 Score=306.90 Aligned_cols=254 Identities=24% Similarity=0.372 Sum_probs=200.6
Q ss_pred hcCCCCCCeeccCCCceEEEEEeCCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEe
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYD 518 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 518 (720)
.++|...+.||+|+||.||++...++..+|+|.+... ....+.|.+|++++++++|+||+++++++.+ ...+++||
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~---~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e 80 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG---SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITE 80 (260)
T ss_pred ccceeEEeEecCccceEEEEEEecCCccEEEEecCCC---hhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEE
Confidence 3567888999999999999998777888999998643 2335678999999999999999999999887 77899999
Q ss_pred eCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCC
Q 004994 519 YGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSG 598 (720)
Q Consensus 519 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~ 598 (720)
|+++++|.+++.... ...+++..+..++.+++.||.|||+. +++||||||+||+++.++.+||+|||.+......
T Consensus 81 ~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~ 155 (260)
T cd05073 81 FMAKGSLLDFLKSDE--GSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDN 155 (260)
T ss_pred eCCCCcHHHHHHhCC--ccccCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCCcceeeccCC
Confidence 999999999986432 34578889999999999999999987 8999999999999999999999999999765432
Q ss_pred CCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcccccCchhhhhhhcC
Q 004994 599 STNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVD 676 (720)
Q Consensus 599 ~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (720)
... ......++..|+|||+. .+.++.++|||||||++||++| |+.||....... ...+..
T Consensus 156 ~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~---~~~~~~-------------- 217 (260)
T cd05073 156 EYT-AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE---VIRALE-------------- 217 (260)
T ss_pred Ccc-cccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHH---HHHHHh--------------
Confidence 211 11223345679999998 5568999999999999999999 999996532211 111100
Q ss_pred CCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 677 PSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 677 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
...........+.++.+++.+|++.+|++||++.++++.|+.+
T Consensus 218 ~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~~ 260 (260)
T cd05073 218 RGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDF 260 (260)
T ss_pred CCCCCCCcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhcC
Confidence 0000001112345788999999999999999999999999863
No 201
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=5.7e-36 Score=313.89 Aligned_cols=249 Identities=22% Similarity=0.334 Sum_probs=198.2
Q ss_pred cCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEe
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYD 518 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 518 (720)
.+|+..+.||+|+||.||+|.. .+++.||+|.+.... ....+.+.+|+++++.++|+||+++++++...++.++|||
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~--~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e 97 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQ--QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVME 97 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCC--cchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeec
Confidence 5788889999999999999964 578999999986433 2335678899999999999999999999999999999999
Q ss_pred eCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCC
Q 004994 519 YGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSG 598 (720)
Q Consensus 519 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~ 598 (720)
|+++++|.+++.. ..+++.+...++.+++.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 98 ~~~~~~L~~~~~~-----~~~~~~~~~~i~~ql~~aL~~LH~~---gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~ 169 (296)
T cd06654 98 YLAGGSLTDVVTE-----TCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE 169 (296)
T ss_pred ccCCCCHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEECccccchhcccc
Confidence 9999999998842 3478889999999999999999987 8999999999999999999999999998765332
Q ss_pred CCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcCC
Q 004994 599 STNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDP 677 (720)
Q Consensus 599 ~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (720)
.. ......++..|+|||.. ...++.++|||||||++|||++|+.||....+.... ..+.. ...+
T Consensus 170 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~--~~~~~-----------~~~~ 234 (296)
T cd06654 170 QS--KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRAL--YLIAT-----------NGTP 234 (296)
T ss_pred cc--ccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhH--HHHhc-----------CCCC
Confidence 11 12234577889999988 456889999999999999999999999754321111 00000 0000
Q ss_pred CCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 678 SLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 678 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.. ..+......+.+++.+||..+|++|||++|++++
T Consensus 235 ~~--~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~ 270 (296)
T cd06654 235 EL--QNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQH 270 (296)
T ss_pred CC--CCccccCHHHHHHHHHHCcCCcccCcCHHHHhhC
Confidence 00 0112234568899999999999999999999975
No 202
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=8.2e-36 Score=309.97 Aligned_cols=255 Identities=24% Similarity=0.346 Sum_probs=198.9
Q ss_pred cCCCCCCeeccCCCceEEEEEeC-CCc----EEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAELP-GGK----LLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHL 514 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~----~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~ 514 (720)
.+|...+.||+|+||+||+|... +|. .||+|.+..... .....++.+|+.++++++||||++++++|.. ...+
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~ 84 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETS-PKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQ 84 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCC-HHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceE
Confidence 45677899999999999999653 333 689998865432 3445678899999999999999999999987 7889
Q ss_pred EEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCC
Q 004994 515 LVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPL 594 (720)
Q Consensus 515 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~ 594 (720)
+||||+++|+|.+++... ...+++.....++.|+++||+|||+. +++||||||+||++++++.+||+|||+++.
T Consensus 85 ~v~e~~~~g~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kL~dfg~~~~ 158 (279)
T cd05057 85 LITQLMPLGCLLDYVRNH---KDNIGSQYLLNWCVQIAKGMSYLEEK---RLVHRDLAARNVLVKTPQHVKITDFGLAKL 158 (279)
T ss_pred EEEecCCCCcHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHhC---CEEecccCcceEEEcCCCeEEECCCccccc
Confidence 999999999999998643 23588999999999999999999986 999999999999999999999999999987
Q ss_pred CCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcccccCchhhhh
Q 004994 595 LFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALS 672 (720)
Q Consensus 595 ~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (720)
+..............+..|++||.. .+.++.++|||||||++||++| |+.||....... +.....
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~---~~~~~~---------- 225 (279)
T cd05057 159 LDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVE---IPDLLE---------- 225 (279)
T ss_pred ccCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHH---HHHHHh----------
Confidence 6533222222222234679999987 5678999999999999999999 999997543211 111100
Q ss_pred hhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 673 RMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 673 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
.......+..+...+.+++.+||..+|.+||++.++++.|+++
T Consensus 226 ----~~~~~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~ 268 (279)
T cd05057 226 ----KGERLPQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKM 268 (279)
T ss_pred ----CCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence 0000000111224678999999999999999999999999876
No 203
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=1.6e-36 Score=322.57 Aligned_cols=250 Identities=18% Similarity=0.255 Sum_probs=191.1
Q ss_pred CeeccCCCceEEEEEe-CCCcEEEEEEecccccc-cccHHHHHHHHHHHHcc-CCCceeEEEeEeccCCeEEEEEeeCCC
Q 004994 446 NFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQ-RQTDEEFLELASTISRL-RHGNIVELIGYCNEHGQHLLVYDYGGN 522 (720)
Q Consensus 446 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~-~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv~e~~~~ 522 (720)
+.||+|+||+||+|.. .+++.||+|++++.... ....+.+.+|+.++.++ +||||+.+++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 4699999999999965 56889999999754322 23345678899998888 699999999999999999999999999
Q ss_pred CCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCCCcc
Q 004994 523 CTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNE 602 (720)
Q Consensus 523 gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~~ 602 (720)
|+|.+++.. ...+++..+..++.++++||+|||+. +|+||||||+|||++.++.+||+|||+++...... .
T Consensus 81 ~~L~~~~~~----~~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~--~ 151 (327)
T cd05617 81 GDLMFHMQR----QRKLPEEHARFYAAEICIALNFLHER---GIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPG--D 151 (327)
T ss_pred CcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEeCCCCEEEeccccceeccCCC--C
Confidence 999988743 34689999999999999999999987 99999999999999999999999999987532211 1
Q ss_pred cccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcCCCCCc
Q 004994 603 LSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDG 681 (720)
Q Consensus 603 ~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 681 (720)
......++..|+|||.. ...++.++|||||||++|||+||+.||.............+. ...+.....
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~---------~~~~~~~~~-- 220 (327)
T cd05617 152 TTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYL---------FQVILEKPI-- 220 (327)
T ss_pred ceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHH---------HHHHHhCCC--
Confidence 22335678999999998 557899999999999999999999999643221111100000 001111000
Q ss_pred hhhHHHHHHHHHHHHHHhccCCCCCCCH------HHHHHH
Q 004994 682 AYLAKSLSRFADIISRCVQWEPGFRPPM------SEIVQD 715 (720)
Q Consensus 682 ~~~~~~~~~l~~l~~~cl~~dP~~RPt~------~evl~~ 715 (720)
..+...+..+.+++.+||+.||++|+++ ++++++
T Consensus 221 ~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h 260 (327)
T cd05617 221 RIPRFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSH 260 (327)
T ss_pred CCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcC
Confidence 0111233567899999999999999984 566543
No 204
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=3.7e-36 Score=313.50 Aligned_cols=252 Identities=23% Similarity=0.314 Sum_probs=196.9
Q ss_pred CCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccc-cccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEee
Q 004994 442 FSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQ-RQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDY 519 (720)
Q Consensus 442 ~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 519 (720)
|+..+.||+|+||.||++.. .+++.||||.+...... ....+.+..|+.++++++|+||+.+++.+.+.+..++||||
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL 81 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence 56678999999999999954 57899999998754322 22335677899999999999999999999999999999999
Q ss_pred CCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCC
Q 004994 520 GGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGS 599 (720)
Q Consensus 520 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~ 599 (720)
+++++|.+++... ....+++..+..++.|++.||.|||+. +|+||||||+||++++++.++|+|||++.......
T Consensus 82 ~~g~~L~~~l~~~--~~~~l~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 156 (285)
T cd05630 82 MNGGDLKFHIYHM--GEAGFEEGRAVFYAAEICCGLEDLHQE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ 156 (285)
T ss_pred cCCCcHHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeccceeecCCCc
Confidence 9999999988532 234588899999999999999999986 99999999999999999999999999987653222
Q ss_pred CcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcCCC
Q 004994 600 TNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPS 678 (720)
Q Consensus 600 ~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (720)
. .....++..|+|||.. .+.++.++|||||||++|||++|+.||............ ......
T Consensus 157 ~---~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~-------------~~~~~~- 219 (285)
T cd05630 157 T---IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEV-------------ERLVKE- 219 (285)
T ss_pred c---ccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHH-------------Hhhhhh-
Confidence 1 1234678899999998 557899999999999999999999999753221110000 000000
Q ss_pred CCchhhHHHHHHHHHHHHHHhccCCCCCCC-----HHHHHHH
Q 004994 679 LDGAYLAKSLSRFADIISRCVQWEPGFRPP-----MSEIVQD 715 (720)
Q Consensus 679 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt-----~~evl~~ 715 (720)
....+......++.+++.+||+.||++||| ++|++++
T Consensus 220 ~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h 261 (285)
T cd05630 220 VQEEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEH 261 (285)
T ss_pred hhhhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcC
Confidence 000111223456889999999999999999 8898874
No 205
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=1.9e-36 Score=321.34 Aligned_cols=238 Identities=22% Similarity=0.261 Sum_probs=183.0
Q ss_pred CeeccCCCceEEEEEe-CCCcEEEEEEeccccc-ccccHHHHHHHH-HHHHccCCCceeEEEeEeccCCeEEEEEeeCCC
Q 004994 446 NFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVS-QRQTDEEFLELA-STISRLRHGNIVELIGYCNEHGQHLLVYDYGGN 522 (720)
Q Consensus 446 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~~~e~-~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 522 (720)
++||+|+||+||+|+. .+|+.||+|++.+... .......+..|. .+++.++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 4699999999999965 5689999999875322 122233444444 467889999999999999999999999999999
Q ss_pred CCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCCCcc
Q 004994 523 CTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNE 602 (720)
Q Consensus 523 gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~~ 602 (720)
|+|.+.+.. ...++......++.|+++||.|||+. +|+||||||+||+++.++.+||+|||+++...... .
T Consensus 81 ~~L~~~l~~----~~~~~~~~~~~~~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~--~ 151 (321)
T cd05603 81 GELFFHLQR----ERCFLEPRARFYAAEVASAIGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPE--E 151 (321)
T ss_pred CCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEccCCCCccCCCCC--C
Confidence 999888743 34577788888999999999999987 99999999999999999999999999987532211 1
Q ss_pred cccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcCCCCCc
Q 004994 603 LSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDG 681 (720)
Q Consensus 603 ~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 681 (720)
......++..|+|||.+ ...++.++|||||||++|||++|+.||...+.... . ..+.....
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~---~-------------~~i~~~~~-- 213 (321)
T cd05603 152 TTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQM---Y-------------DNILHKPL-- 213 (321)
T ss_pred ccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHH---H-------------HHHhcCCC--
Confidence 22335678899999998 45689999999999999999999999965431110 0 01111000
Q ss_pred hhhHHHHHHHHHHHHHHhccCCCCCCCHH
Q 004994 682 AYLAKSLSRFADIISRCVQWEPGFRPPMS 710 (720)
Q Consensus 682 ~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ 710 (720)
..+.....++.+++.+||+.||.+||++.
T Consensus 214 ~~~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 214 QLPGGKTVAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred CCCCCCCHHHHHHHHHHccCCHhhcCCCC
Confidence 01112235678999999999999999764
No 206
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=1.7e-36 Score=322.14 Aligned_cols=243 Identities=21% Similarity=0.247 Sum_probs=185.2
Q ss_pred CeeccCCCceEEEEEe-CCCcEEEEEEecccccc-cccHHHHHHH-HHHHHccCCCceeEEEeEeccCCeEEEEEeeCCC
Q 004994 446 NFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQ-RQTDEEFLEL-ASTISRLRHGNIVELIGYCNEHGQHLLVYDYGGN 522 (720)
Q Consensus 446 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~-~~~~~~~~~e-~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 522 (720)
+.||+|+||+||+|.. .+++.||+|++.+.... ......+..| ..+++.++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 4699999999999965 46789999999753211 1222334444 4456889999999999999999999999999999
Q ss_pred CCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCCCcc
Q 004994 523 CTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNE 602 (720)
Q Consensus 523 gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~~ 602 (720)
|+|.+++.. ...+.......++.|+++||.|||+. +|+||||||+|||++.++.+||+|||+++...... .
T Consensus 81 ~~L~~~~~~----~~~~~~~~~~~~~~qi~~~L~~lH~~---giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~--~ 151 (325)
T cd05602 81 GELFYHLQR----ERCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN--G 151 (325)
T ss_pred CcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEEccCCCCcccccCC--C
Confidence 999998853 24567777888999999999999987 99999999999999999999999999997542211 1
Q ss_pred cccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcCCCCCc
Q 004994 603 LSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDG 681 (720)
Q Consensus 603 ~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 681 (720)
......+++.|+|||.+ ...++.++|||||||++|||++|+.||........ .. .+.....
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~---~~-------------~i~~~~~-- 213 (325)
T cd05602 152 TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEM---YD-------------NILNKPL-- 213 (325)
T ss_pred CcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHH---HH-------------HHHhCCc--
Confidence 22345688999999988 55689999999999999999999999975332111 00 0000000
Q ss_pred hhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 682 AYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 682 ~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
......+..+.+++.+||+.||.+||++.+.+..
T Consensus 214 ~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ 247 (325)
T cd05602 214 QLKPNITNSARHLLEGLLQKDRTKRLGAKDDFME 247 (325)
T ss_pred CCCCCCCHHHHHHHHHHcccCHHHCCCCCCCHHH
Confidence 0011223567899999999999999998754433
No 207
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=2.7e-36 Score=320.24 Aligned_cols=242 Identities=19% Similarity=0.243 Sum_probs=189.5
Q ss_pred CCCCCCeeccCCCceEEEEEe-CCCcEEEEEEeccccc-ccccHHHHHHHHHHHHccC-CCceeEEEeEeccCCeEEEEE
Q 004994 441 SFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVS-QRQTDEEFLELASTISRLR-HGNIVELIGYCNEHGQHLLVY 517 (720)
Q Consensus 441 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~~~e~~~l~~l~-H~niv~l~~~~~~~~~~~lv~ 517 (720)
+|...+.||+|+||+||+|.. .+|+.||+|++.+... .....+.+..|.++++.+. |++|+++++++.+.+..++||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 366678999999999999965 5789999999975422 2233456778888888885 578888999999999999999
Q ss_pred eeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCC
Q 004994 518 DYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFS 597 (720)
Q Consensus 518 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~ 597 (720)
||+++|+|.+++.. ...+++.....++.+++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 81 Ey~~~g~L~~~i~~----~~~l~~~~~~~i~~qi~~al~~lH~~---~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~ 153 (323)
T cd05615 81 EYVNGGDLMYHIQQ----VGKFKEPQAVFYAAEISVGLFFLHRR---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMV 153 (323)
T ss_pred cCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeccccccccCC
Confidence 99999999988853 34688999999999999999999987 999999999999999999999999999875422
Q ss_pred CCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcC
Q 004994 598 GSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVD 676 (720)
Q Consensus 598 ~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (720)
.. .......++..|+|||.+ .+.++.++|||||||++|||+||+.||....... .. ..+..
T Consensus 154 ~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~---~~-------------~~i~~ 215 (323)
T cd05615 154 DG--VTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDE---LF-------------QSIME 215 (323)
T ss_pred CC--ccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHH---HH-------------HHHHh
Confidence 21 122334578999999998 4568999999999999999999999997543211 11 11111
Q ss_pred CCCCchhhHHHHHHHHHHHHHHhccCCCCCCCH
Q 004994 677 PSLDGAYLAKSLSRFADIISRCVQWEPGFRPPM 709 (720)
Q Consensus 677 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~ 709 (720)
... .++...+.++.+++.+||+.+|++|++.
T Consensus 216 ~~~--~~p~~~~~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05615 216 HNV--SYPKSLSKEAVSICKGLMTKHPSKRLGC 246 (323)
T ss_pred CCC--CCCccCCHHHHHHHHHHcccCHhhCCCC
Confidence 000 0112233567899999999999999974
No 208
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=3.5e-36 Score=313.76 Aligned_cols=252 Identities=22% Similarity=0.299 Sum_probs=196.4
Q ss_pred CCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccc-cccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEee
Q 004994 442 FSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQ-RQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDY 519 (720)
Q Consensus 442 ~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 519 (720)
|+..+.||+|+||+||+|.. .+++.||+|.+...... ......+.+|++++++++|+||+.+++++...+..++||||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence 55668899999999999955 57899999998654322 22335678899999999999999999999999999999999
Q ss_pred CCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCC
Q 004994 520 GGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGS 599 (720)
Q Consensus 520 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~ 599 (720)
+++++|.+++... ....+++.....++.|++.||.|||+. +|+||||||+||++++++.+||+|||++.......
T Consensus 82 ~~~~~L~~~~~~~--~~~~~~~~~~~~~~~ql~~~l~~lH~~---~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~ 156 (285)
T cd05632 82 MNGGDLKFHIYNM--GNPGFEEERALFYAAEILCGLEDLHRE---NTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGE 156 (285)
T ss_pred ccCccHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEECCCCCEEEecCCcceecCCCC
Confidence 9999999888532 234689999999999999999999987 99999999999999999999999999997653221
Q ss_pred CcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcCCC
Q 004994 600 TNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPS 678 (720)
Q Consensus 600 ~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (720)
......++..|+|||.. ...++.++|||||||++|||+||+.||...........+.. ++...
T Consensus 157 ---~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~------------~~~~~- 220 (285)
T cd05632 157 ---SIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDR------------RVLET- 220 (285)
T ss_pred ---cccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH------------hhhcc-
Confidence 11234678899999998 55789999999999999999999999975432111111100 00000
Q ss_pred CCchhhHHHHHHHHHHHHHHhccCCCCCCC-----HHHHHHH
Q 004994 679 LDGAYLAKSLSRFADIISRCVQWEPGFRPP-----MSEIVQD 715 (720)
Q Consensus 679 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt-----~~evl~~ 715 (720)
...+......++.+++.+|++.||++||+ +++++++
T Consensus 221 -~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05632 221 -EEVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRH 261 (285)
T ss_pred -ccccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcC
Confidence 00112223456789999999999999999 6677654
No 209
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=1.8e-36 Score=327.34 Aligned_cols=258 Identities=19% Similarity=0.222 Sum_probs=198.6
Q ss_pred HHHHHhcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccc-cccccHHHHHHHHHHHHccCCCceeEEEeEeccCC
Q 004994 434 SLQQYTNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTV-SQRQTDEEFLELASTISRLRHGNIVELIGYCNEHG 511 (720)
Q Consensus 434 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~-~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~ 511 (720)
++....++|+..+.||+|+||.||+|.. .+++.||+|++.+.. ......+.+.+|+++++.++||||+++++++.+.+
T Consensus 37 ~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~ 116 (371)
T cd05622 37 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDR 116 (371)
T ss_pred hcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCC
Confidence 3444557899999999999999999965 468899999986422 22234456789999999999999999999999999
Q ss_pred eEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccC
Q 004994 512 QHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGL 591 (720)
Q Consensus 512 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGl 591 (720)
..++||||+++|+|.+++.. ..++......++.+++.||+|||+. +|+||||||+|||++.++++||+|||+
T Consensus 117 ~~~lv~Ey~~gg~L~~~~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NIll~~~~~ikL~DfG~ 188 (371)
T cd05622 117 YLYMVMEYMPGGDLVNLMSN-----YDVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGT 188 (371)
T ss_pred EEEEEEcCCCCCcHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHEEECCCCCEEEEeCCc
Confidence 99999999999999998853 2467778888999999999999987 999999999999999999999999999
Q ss_pred CCCCCCCCCcccccCccccccCCCCccCCC-----CCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccC
Q 004994 592 APLLFSGSTNELSEGLLTAHGSGAPEFESG-----SYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLH 666 (720)
Q Consensus 592 a~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-----~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~ 666 (720)
++.+..... .......+++.|+|||.+.+ .++.++|||||||++|||++|+.||.........
T Consensus 189 a~~~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~----------- 256 (371)
T cd05622 189 CMKMNKEGM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTY----------- 256 (371)
T ss_pred eeEcCcCCc-ccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHH-----------
Confidence 987643221 12234568999999998732 3789999999999999999999999754321111
Q ss_pred chhhhhhhcCC--CCCchhhHHHHHHHHHHHHHHhccCCCC--CCCHHHHHHHH
Q 004994 667 DIDALSRMVDP--SLDGAYLAKSLSRFADIISRCVQWEPGF--RPPMSEIVQDL 716 (720)
Q Consensus 667 ~~~~~~~~~~~--~~~~~~~~~~~~~l~~l~~~cl~~dP~~--RPt~~evl~~L 716 (720)
..+... .+........+..+.+++.+|+..++.+ |++++|++++.
T Consensus 257 -----~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~ 305 (371)
T cd05622 257 -----SKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHL 305 (371)
T ss_pred -----HHHHcCCCcccCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCc
Confidence 111100 0000001123456789999999844433 78999998764
No 210
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=9.6e-36 Score=306.93 Aligned_cols=253 Identities=21% Similarity=0.347 Sum_probs=197.9
Q ss_pred CCCCCCeeccCCCceEEEEEeCCCcEEEEEEecccccc----cccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEE
Q 004994 441 SFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQ----RQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLV 516 (720)
Q Consensus 441 ~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~----~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 516 (720)
+|...+.||+|+||+||+|...+|+.+|+|.+...... ......+.+|++++++++|+||+++++++.+.+..++|
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF 80 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence 46778999999999999998778999999998643211 12235688999999999999999999999999999999
Q ss_pred EeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCC
Q 004994 517 YDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLF 596 (720)
Q Consensus 517 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~ 596 (720)
|||+++++|.+++.. ...+++.....++.+++.||+|||.. +|+|+||||+||++++++.+||+|||++....
T Consensus 81 ~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 153 (265)
T cd06631 81 MEFVPGGSISSILNR----FGPLPEPVFCKYTKQILDGVAYLHNN---CVVHRDIKGNNVMLMPNGIIKLIDFGCARRLA 153 (265)
T ss_pred EecCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHhEEECCCCeEEeccchhhHhhh
Confidence 999999999999853 23578888899999999999999987 89999999999999999999999999987653
Q ss_pred CCC----CcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhh
Q 004994 597 SGS----TNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDAL 671 (720)
Q Consensus 597 ~~~----~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (720)
... .........++..|+|||+. ...++.++|||||||++|||++|+.||......... .... ..
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~--~~~~--------~~ 223 (265)
T cd06631 154 WVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAM--FYIG--------AH 223 (265)
T ss_pred hccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHH--HHhh--------hc
Confidence 211 11122234578899999998 446889999999999999999999999653321110 0000 00
Q ss_pred hhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 672 SRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 672 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
. ...+... .....++.+++.+||+.+|++||++.|++++
T Consensus 224 ~-~~~~~~~----~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 262 (265)
T cd06631 224 R-GLMPRLP----DSFSAAAIDFVTSCLTRDQHERPSALQLLRH 262 (265)
T ss_pred c-CCCCCCC----CCCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 0 0011111 1233567899999999999999999999864
No 211
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=9.1e-36 Score=308.46 Aligned_cols=258 Identities=25% Similarity=0.398 Sum_probs=196.6
Q ss_pred CCCCCeeccCCCceEEEEEeC----CCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCC------
Q 004994 442 FSEGNFIGEGLLGSVYKAELP----GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHG------ 511 (720)
Q Consensus 442 ~~~~~~lg~G~~g~Vy~~~~~----~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~------ 511 (720)
|...+.||+|+||.||+|... +++.||||++..........+++.+|++++++++||||+++++++...+
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 456788999999999999643 3688999999765444445677889999999999999999999885432
Q ss_pred eEEEEEeeCCCCCHHHHhhccc--hhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccc
Q 004994 512 QHLLVYDYGGNCTLHDLLHSDE--EAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDC 589 (720)
Q Consensus 512 ~~~lv~e~~~~gsL~~~l~~~~--~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DF 589 (720)
..++++||+.+|+|.+++.... .....+++....+++.+++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~nili~~~~~~kl~df 157 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSK---NFIHRDLAARNCMLNENMTVCVADF 157 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccchhhEEEcCCCCEEECcc
Confidence 3478999999999998875321 1123578889999999999999999987 8999999999999999999999999
Q ss_pred cCCCCCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcccccCc
Q 004994 590 GLAPLLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHD 667 (720)
Q Consensus 590 Gla~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~ 667 (720)
|+++...............++..|++||.. .+.++.++|||||||++|||++ |+.||....... ...+.. .
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~---~~~~~~----~ 230 (273)
T cd05074 158 GLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSE---IYNYLI----K 230 (273)
T ss_pred cccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHH---HHHHHH----c
Confidence 999876433221112222344678999987 5568899999999999999999 899986433211 111100 0
Q ss_pred hhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 668 IDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 668 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
... .. .....+..+.+++.+||+.+|++||++.|+++.|+++
T Consensus 231 ~~~------~~----~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 231 GNR------LK----QPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred CCc------CC----CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 000 00 0012235788999999999999999999999999986
No 212
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=4.5e-36 Score=312.81 Aligned_cols=261 Identities=21% Similarity=0.317 Sum_probs=200.6
Q ss_pred cCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEe
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYD 518 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 518 (720)
++|+..+.||+|+||+||++.. .+|+.||+|++.... .....+.+.+|+++++.++||||+++++++...+..++|||
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 83 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGA-KSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCME 83 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecC-cchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEe
Confidence 4566778999999999999965 568999999986442 23345788999999999999999999999999999999999
Q ss_pred eCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCC
Q 004994 519 YGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSG 598 (720)
Q Consensus 519 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~ 598 (720)
|+++++|.+++.. ...+++.....++.++++||.|||+.+ +++||||||+||++++++.++|+|||++......
T Consensus 84 ~~~~~~L~~~~~~----~~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~ 157 (284)
T cd06620 84 FMDCGSLDRIYKK----GGPIPVEILGKIAVAVVEGLTYLYNVH--RIMHRDIKPSNILVNSRGQIKLCDFGVSGELINS 157 (284)
T ss_pred cCCCCCHHHHHHh----ccCCCHHHHHHHHHHHHHHHHHHHHhc--CeeccCCCHHHEEECCCCcEEEccCCcccchhhh
Confidence 9999999998853 245889999999999999999999743 7999999999999999999999999998755222
Q ss_pred CCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcCC
Q 004994 599 STNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDP 677 (720)
Q Consensus 599 ~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (720)
. .....++..|+|||.. .+.++.++|||||||++||++||+.||............. ..+ .+....++..
T Consensus 158 ~----~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~---~~~--~~~~~~~~~~ 228 (284)
T cd06620 158 I----ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDP---MGI--LDLLQQIVQE 228 (284)
T ss_pred c----cCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhh---hHH--HHHHHHHhhc
Confidence 1 1234578899999987 5678999999999999999999999997543221100000 000 0011111111
Q ss_pred CCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q 004994 678 SLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDL 716 (720)
Q Consensus 678 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L 716 (720)
........+.+..+.+++.+|++.||++|||++|++++.
T Consensus 229 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~ 267 (284)
T cd06620 229 PPPRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMP 267 (284)
T ss_pred cCCCCCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCc
Confidence 111001112446788999999999999999999999763
No 213
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=1.7e-36 Score=322.26 Aligned_cols=241 Identities=23% Similarity=0.258 Sum_probs=185.4
Q ss_pred CeeccCCCceEEEEEe-CCCcEEEEEEeccccc-ccccHHHHHHHHH-HHHccCCCceeEEEeEeccCCeEEEEEeeCCC
Q 004994 446 NFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVS-QRQTDEEFLELAS-TISRLRHGNIVELIGYCNEHGQHLLVYDYGGN 522 (720)
Q Consensus 446 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~~~e~~-~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 522 (720)
+.||+|+||+||+|.. .+|+.||+|++.+... .......+..|.. +++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 4699999999999954 5799999999975422 1223344555544 56789999999999999999999999999999
Q ss_pred CCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCCCcc
Q 004994 523 CTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNE 602 (720)
Q Consensus 523 gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~~ 602 (720)
|+|.+++.. ...+++.....++.|+++||.|||+. +|+||||||+|||+++++.+||+|||+++...... .
T Consensus 81 ~~L~~~l~~----~~~~~~~~~~~~~~qi~~al~~lH~~---givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~--~ 151 (325)
T cd05604 81 GELFFHLQR----ERSFPEPRARFYAAEIASALGYLHSI---NIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQS--D 151 (325)
T ss_pred CCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEeecCCcccCCCCC--C
Confidence 999988753 34688899999999999999999987 99999999999999999999999999987542211 1
Q ss_pred cccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcCCCCCc
Q 004994 603 LSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDG 681 (720)
Q Consensus 603 ~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 681 (720)
......++..|+|||.+ .+.++.++|||||||++|||++|+.||......... ..+......
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~----------------~~~~~~~~~- 214 (325)
T cd05604 152 TTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMY----------------DNILHKPLV- 214 (325)
T ss_pred CcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHH----------------HHHHcCCcc-
Confidence 22335678899999998 557899999999999999999999999653321110 011110000
Q ss_pred hhhHHHHHHHHHHHHHHhccCCCCCCCHHHHH
Q 004994 682 AYLAKSLSRFADIISRCVQWEPGFRPPMSEIV 713 (720)
Q Consensus 682 ~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl 713 (720)
........+.+++.+|++.+|.+||++.+.+
T Consensus 215 -~~~~~~~~~~~ll~~ll~~~p~~R~~~~~~~ 245 (325)
T cd05604 215 -LRPGASLTAWSILEELLEKDRQRRLGAKEDF 245 (325)
T ss_pred -CCCCCCHHHHHHHHHHhccCHHhcCCCCCCH
Confidence 0011234677999999999999999886433
No 214
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=8.3e-36 Score=308.01 Aligned_cols=254 Identities=24% Similarity=0.376 Sum_probs=187.7
Q ss_pred eeccCCCceEEEEEeCCC---cEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEeeCCCC
Q 004994 447 FIGEGLLGSVYKAELPGG---KLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDYGGNC 523 (720)
Q Consensus 447 ~lg~G~~g~Vy~~~~~~g---~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~g 523 (720)
.||+|+||+||+|...++ ..+++|.+..... ....+.|.+|+++++.++||||++++++|.+....++||||+++|
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 80 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANAS-SKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELG 80 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCC-hHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCC
Confidence 599999999999965433 3566777654322 234578999999999999999999999999999999999999999
Q ss_pred CHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCCCccc
Q 004994 524 TLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNEL 603 (720)
Q Consensus 524 sL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~~~ 603 (720)
+|.++++.........++.....++.++++||+|||+. +++||||||+|||++.++.+||+|||++...........
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 157 (268)
T cd05086 81 DLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKH---NFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIET 157 (268)
T ss_pred cHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CeeccCCccceEEEcCCccEEecccccccccCcchhhhc
Confidence 99999975433334566777889999999999999987 899999999999999999999999999864322211111
Q ss_pred ccCccccccCCCCccCC--------CCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcccccCchhhhhhh
Q 004994 604 SEGLLTAHGSGAPEFES--------GSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRM 674 (720)
Q Consensus 604 ~~~~~~~~~~~aPE~~~--------~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (720)
.....++..|+|||+.. ..++.++|||||||++|||++ |..||....+... ..... . +.....
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~---~~~~~---~--~~~~~~ 229 (268)
T cd05086 158 EDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREV---LNHVI---K--DQQVKL 229 (268)
T ss_pred ccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHH---HHHHH---h--hccccc
Confidence 22345677899999862 235789999999999999997 5778864332111 11000 0 001112
Q ss_pred cCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 004994 675 VDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLL 717 (720)
Q Consensus 675 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 717 (720)
.++..... ..+.+.+++..|| .+|++||+++||++.|.
T Consensus 230 ~~~~~~~~----~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 230 FKPQLELP----YSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred CCCccCCC----CcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 22222211 2356778999999 67999999999999874
No 215
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.7e-37 Score=323.61 Aligned_cols=243 Identities=26% Similarity=0.363 Sum_probs=198.3
Q ss_pred eeccCCCceEEEEE-eCCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEeeCCCCCH
Q 004994 447 FIGEGLLGSVYKAE-LPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDYGGNCTL 525 (720)
Q Consensus 447 ~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL 525 (720)
+||+|.||+||-|+ ..+...+|||.+.... ....+-+.+|+.+.++++|+|||+++|.|.+++..-+.||-++||+|
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekd--sr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSL 659 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKD--SREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSL 659 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeeccccc--chhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcH
Confidence 79999999999995 4567789999997432 34456688999999999999999999999999999999999999999
Q ss_pred HHHhhccchhcccc--CHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEc-CCCCeEEccccCCCCCCCCCCcc
Q 004994 526 HDLLHSDEEAHKKF--SWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLD-EKLIVRVSDCGLAPLLFSGSTNE 602 (720)
Q Consensus 526 ~~~l~~~~~~~~~~--~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~-~~~~~kl~DFGla~~~~~~~~~~ 602 (720)
.++++.. ..++ .+.+.-.+..||.+||.|||+. .|||||||-+|||++ -.|.+||+|||-++.+.. -+.
T Consensus 660 SsLLrsk---WGPlKDNEstm~fYtkQILeGLkYLHen---~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAg--inP 731 (1226)
T KOG4279|consen 660 SSLLRSK---WGPLKDNESTMNFYTKQILEGLKYLHEN---KIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAG--INP 731 (1226)
T ss_pred HHHHHhc---cCCCccchhHHHHHHHHHHHHhhhhhhc---ceeeccccCCcEEEeeccceEEecccccchhhcc--CCc
Confidence 9999753 3344 6677888999999999999998 899999999999995 688999999999988743 344
Q ss_pred cccCccccccCCCCccC-CC--CCCCccchHhHHHHHHHHHhCCCCCCCCCCc-cccchhhhcccccCchhhhhhhcCCC
Q 004994 603 LSEGLLTAHGSGAPEFE-SG--SYSCQSDVYSLGVVMLELLTGRKPYDRSRPR-GEQSLVRWAIPRLHDIDALSRMVDPS 678 (720)
Q Consensus 603 ~~~~~~~~~~~~aPE~~-~~--~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (720)
.++.+.||..|||||++ .| .|+.++|||||||.+.||.||++||-..... .....+- -..
T Consensus 732 ~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkVG----------------myK 795 (1226)
T KOG4279|consen 732 CTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKVG----------------MYK 795 (1226)
T ss_pred cccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhhc----------------cee
Confidence 56678899999999999 44 4899999999999999999999999643221 1111110 011
Q ss_pred CCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 679 LDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 679 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.....+.+...+...++.+|...||.+||++++++++
T Consensus 796 vHP~iPeelsaeak~FilrcFepd~~~R~sA~~LL~D 832 (1226)
T KOG4279|consen 796 VHPPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQD 832 (1226)
T ss_pred cCCCCcHHHHHHHHHHHHHHcCCCcccCccHHHhccC
Confidence 1122455677788999999999999999999999864
No 216
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-36 Score=307.82 Aligned_cols=248 Identities=21% Similarity=0.357 Sum_probs=209.6
Q ss_pred cCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEe
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYD 518 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 518 (720)
.-|...+.||+|.|.+|-.|++ -+|..||||++.+...+......+..|++.|+.++|||||++|++....-.+|||.|
T Consensus 18 GLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLE 97 (864)
T KOG4717|consen 18 GLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILE 97 (864)
T ss_pred eeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEE
Confidence 3466678899999999999954 589999999998877666667788899999999999999999999999999999999
Q ss_pred eCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEE-cCCCCeEEccccCCCCCCC
Q 004994 519 YGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILL-DEKLIVRVSDCGLAPLLFS 597 (720)
Q Consensus 519 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl-~~~~~~kl~DFGla~~~~~ 597 (720)
+.++|+|+|++-..+ ..+.+....+++.||..|+.|+|+. .+|||||||+||.+ .+-|-|||.|||++..+.+
T Consensus 98 LGD~GDl~DyImKHe---~Gl~E~La~kYF~QI~~AI~YCHqL---HVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~P 171 (864)
T KOG4717|consen 98 LGDGGDLFDYIMKHE---EGLNEDLAKKYFAQIVHAISYCHQL---HVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQP 171 (864)
T ss_pred ecCCchHHHHHHhhh---ccccHHHHHHHHHHHHHHHHHHhhh---hhhcccCCcceeEEeeecCceEeeeccccccCCC
Confidence 999999999996443 4578888899999999999999999 69999999999876 6678999999999988766
Q ss_pred CCCcccccCccccccCCCCccC-CCCCC-CccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhc
Q 004994 598 GSTNELSEGLLTAHGSGAPEFE-SGSYS-CQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMV 675 (720)
Q Consensus 598 ~~~~~~~~~~~~~~~~~aPE~~-~~~~~-~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (720)
+... ....|...|.|||++ +..|+ +++||||+|||||.|+.|+.||...+ |.+.+..++
T Consensus 172 G~kL---~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeAN----------------DSETLTmIm 232 (864)
T KOG4717|consen 172 GKKL---TTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEAN----------------DSETLTMIM 232 (864)
T ss_pred cchh---hcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCcccccc----------------chhhhhhhh
Confidence 5433 345788899999998 44675 58999999999999999999997543 334555666
Q ss_pred CCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 004994 676 DPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQ 714 (720)
Q Consensus 676 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 714 (720)
|.... .+.....+.++||.+||+.||.+|-+.+||+.
T Consensus 233 DCKYt--vPshvS~eCrdLI~sMLvRdPkkRAslEeI~s 269 (864)
T KOG4717|consen 233 DCKYT--VPSHVSKECRDLIQSMLVRDPKKRASLEEIVS 269 (864)
T ss_pred ccccc--CchhhhHHHHHHHHHHHhcCchhhccHHHHhc
Confidence 65433 34556778899999999999999999999874
No 217
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=6.3e-36 Score=312.83 Aligned_cols=263 Identities=27% Similarity=0.343 Sum_probs=203.6
Q ss_pred cCHHHHHHHhcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHcc-CCCceeEEEeEe
Q 004994 430 FTIASLQQYTNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRL-RHGNIVELIGYC 507 (720)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~ 507 (720)
++.+++..++++|...+.||+|+||.||+|.. .+++.+|+|++... ......+.+|+.+++++ +|||++++++++
T Consensus 12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~---~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~ 88 (291)
T cd06639 12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPI---SDVDEEIEAEYNILQSLPNHPNVVKFYGMF 88 (291)
T ss_pred hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEeccc---ccHHHHHHHHHHHHHHhcCCCCeEEEEEEE
Confidence 45566667788999999999999999999965 57899999998643 22345677889999998 899999999998
Q ss_pred ccC-----CeEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCC
Q 004994 508 NEH-----GQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKL 582 (720)
Q Consensus 508 ~~~-----~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~ 582 (720)
... +..++||||+++++|.++++........+++..+..++.+++.||.|||+. +++||||||+||++++++
T Consensus 89 ~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~nili~~~~ 165 (291)
T cd06639 89 YKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNN---RIIHRDVKGNNILLTTEG 165 (291)
T ss_pred EeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCC
Confidence 643 368999999999999998864333345688999999999999999999987 999999999999999999
Q ss_pred CeEEccccCCCCCCCCCCcccccCccccccCCCCccCCC------CCCCccchHhHHHHHHHHHhCCCCCCCCCCccccc
Q 004994 583 IVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFESG------SYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQS 656 (720)
Q Consensus 583 ~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~------~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~ 656 (720)
.+||+|||++........ ......++..|+|||.... .++.++|||||||++|||++|+.||........
T Consensus 166 ~~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~-- 241 (291)
T cd06639 166 GVKLVDFGVSAQLTSTRL--RRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKT-- 241 (291)
T ss_pred CEEEeecccchhcccccc--cccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHH--
Confidence 999999999876543221 1223456788999998732 268899999999999999999999965332111
Q ss_pred hhhhcccccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 657 LVRWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 657 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
...+.. ...+... ...+....+.+++.+||+.+|++||++.|++++
T Consensus 242 ~~~~~~-----------~~~~~~~--~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 287 (291)
T cd06639 242 LFKIPR-----------NPPPTLL--HPEKWCRSFNHFISQCLIKDFEARPSVTHLLEH 287 (291)
T ss_pred HHHHhc-----------CCCCCCC--cccccCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 111100 0000000 112233568899999999999999999999875
No 218
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=6.1e-36 Score=318.31 Aligned_cols=266 Identities=21% Similarity=0.268 Sum_probs=193.2
Q ss_pred CCeeccC--CCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEeeCC
Q 004994 445 GNFIGEG--LLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDYGG 521 (720)
Q Consensus 445 ~~~lg~G--~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~ 521 (720)
.++||+| +|++||++.. .+|+.||+|++..........+.+.+|+++++.++||||++++++|..++..++||||++
T Consensus 3 ~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~ 82 (327)
T cd08227 3 LTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMA 82 (327)
T ss_pred hhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEeccC
Confidence 4689999 6889999954 679999999997554334445667889999999999999999999999999999999999
Q ss_pred CCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCCC-
Q 004994 522 NCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGST- 600 (720)
Q Consensus 522 ~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~~- 600 (720)
+|+|.+++.... ...+++..+..++.|+++||.|||+. +|+||||||+|||++.++.++++||+.+........
T Consensus 83 ~~~l~~~~~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~ 157 (327)
T cd08227 83 YGSAKDLICTHF--MDGMSELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQR 157 (327)
T ss_pred CCcHHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCChhhEEEecCCcEEEcccchhhcccccccc
Confidence 999999985321 23588999999999999999999987 899999999999999999999999987544321111
Q ss_pred ----cccccCccccccCCCCccCCC---CCCCccchHhHHHHHHHHHhCCCCCCCCCCccc-cchhhhcccccCch----
Q 004994 601 ----NELSEGLLTAHGSGAPEFESG---SYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGE-QSLVRWAIPRLHDI---- 668 (720)
Q Consensus 601 ----~~~~~~~~~~~~~~aPE~~~~---~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~-~~~~~~~~~~~~~~---- 668 (720)
........++..|+|||++.+ .++.++|||||||++|||++|+.||........ ........+...+.
T Consensus 158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (327)
T cd08227 158 LRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTIP 237 (327)
T ss_pred ccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccchh
Confidence 001112335667999999843 588999999999999999999999964321110 00000000000000
Q ss_pred -hhh-------------------hhhc---CCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 669 -DAL-------------------SRMV---DPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 669 -~~~-------------------~~~~---~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
+.. .... ..............++.+++.+||+.||++|||++|++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~ 307 (327)
T cd08227 238 AEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 307 (327)
T ss_pred hhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcC
Confidence 000 0000 0000001122345678999999999999999999999874
No 219
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=1.1e-35 Score=305.86 Aligned_cols=251 Identities=25% Similarity=0.391 Sum_probs=189.3
Q ss_pred CeeccCCCceEEEEEeC----CCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEec-cCCeEEEEEeeC
Q 004994 446 NFIGEGLLGSVYKAELP----GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCN-EHGQHLLVYDYG 520 (720)
Q Consensus 446 ~~lg~G~~g~Vy~~~~~----~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~-~~~~~~lv~e~~ 520 (720)
+.||+|+||.||+|... ++..||+|++... ......+.+.+|+.+++.++||||+++++++. .++..++||||+
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~-~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~ 79 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRI-TDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYM 79 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCcc-CCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecC
Confidence 46899999999999643 2457999998532 22334567889999999999999999999875 455688999999
Q ss_pred CCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCCC
Q 004994 521 GNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGST 600 (720)
Q Consensus 521 ~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~~ 600 (720)
.+|+|.+++... ....++.....++.++++||+|||+. +++||||||+|||+++++.+||+|||+++.+.....
T Consensus 80 ~~~~L~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~ 153 (262)
T cd05058 80 KHGDLRNFIRSE---THNPTVKDLIGFGLQVAKGMEYLASK---KFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEY 153 (262)
T ss_pred CCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCccccccccCCcc
Confidence 999999998632 23457777889999999999999987 899999999999999999999999999976533211
Q ss_pred cc--cccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhC-CCCCCCCCCccccchhhhcccccCchhhhhhhcC
Q 004994 601 NE--LSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTG-RKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVD 676 (720)
Q Consensus 601 ~~--~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG-~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (720)
.. ......++..|+|||.. ...++.++|||||||++|||++| ..||...... ....... ....
T Consensus 154 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~---~~~~~~~----------~~~~ 220 (262)
T cd05058 154 YSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSF---DITVYLL----------QGRR 220 (262)
T ss_pred eeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHH---HHHHHHh----------cCCC
Confidence 11 11123345679999987 56789999999999999999995 5666532211 1111100 0000
Q ss_pred CCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhC
Q 004994 677 PSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCMI 720 (720)
Q Consensus 677 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~ 720 (720)
+. .+...+..+.+++.+||+.+|++||++.|+++.|++++
T Consensus 221 ~~----~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~ 260 (262)
T cd05058 221 LL----QPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIF 260 (262)
T ss_pred CC----CCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHh
Confidence 00 01122356889999999999999999999999999863
No 220
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=1.1e-35 Score=304.68 Aligned_cols=249 Identities=24% Similarity=0.381 Sum_probs=200.2
Q ss_pred cCCCCCCeeccCCCceEEEEEeC-CCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEe
Q 004994 440 NSFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYD 518 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 518 (720)
++|+..+.||+|+||.||+|... +++.||+|.+.... ..+++.+|++++++++|+||+++++++.+....++++|
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~----~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e 78 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEE----DLQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVME 78 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHH----HHHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEe
Confidence 57888899999999999999765 48899999986432 16789999999999999999999999999999999999
Q ss_pred eCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCC
Q 004994 519 YGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSG 598 (720)
Q Consensus 519 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~ 598 (720)
|+++++|.+++.. ....+++.....++.++++||.|||+. +++||||+|+||++++++.+||+|||++......
T Consensus 79 ~~~~~~L~~~l~~---~~~~l~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~ 152 (256)
T cd06612 79 YCGAGSVSDIMKI---TNKTLTEEEIAAILYQTLKGLEYLHSN---KKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDT 152 (256)
T ss_pred cCCCCcHHHHHHh---CccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEECCCCcEEEcccccchhcccC
Confidence 9999999999853 235689999999999999999999987 8999999999999999999999999999876432
Q ss_pred CCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcCC
Q 004994 599 STNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDP 677 (720)
Q Consensus 599 ~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (720)
.. ......++..|+|||+. ...++.++|||||||++|||+||+.||....+......+. ....+
T Consensus 153 ~~--~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~-------------~~~~~ 217 (256)
T cd06612 153 MA--KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIP-------------NKPPP 217 (256)
T ss_pred cc--ccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhc-------------cCCCC
Confidence 21 12234467789999988 4568999999999999999999999997543221110000 00000
Q ss_pred CCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 678 SLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 678 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.. ..+......+.+++.+||+.||++|||++||+++
T Consensus 218 ~~--~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~ 253 (256)
T cd06612 218 TL--SDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQH 253 (256)
T ss_pred CC--CchhhcCHHHHHHHHHHHhcChhhCcCHHHHhcC
Confidence 00 0112234578899999999999999999999874
No 221
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=1.2e-35 Score=305.72 Aligned_cols=238 Identities=25% Similarity=0.394 Sum_probs=185.1
Q ss_pred CeeccCCCceEEEEEeCC-------------CcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCe
Q 004994 446 NFIGEGLLGSVYKAELPG-------------GKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQ 512 (720)
Q Consensus 446 ~~lg~G~~g~Vy~~~~~~-------------g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~ 512 (720)
+.||+|+||.||+|.+.+ ...||+|.+.... ......|.+|+.+++.++||||+++++++.....
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~ 78 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSH--RDISLAFFETASMMRQVSHKHIVLLYGVCVRDVE 78 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhh--hhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCC
Confidence 358999999999996532 2358889876432 3345678899999999999999999999999889
Q ss_pred EEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCC-------eE
Q 004994 513 HLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLI-------VR 585 (720)
Q Consensus 513 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~-------~k 585 (720)
.++||||+++++|..+++.. ...+++..+.+++.|+++||+|||+. +|+||||||+|||++.++. +|
T Consensus 79 ~~lv~e~~~~~~l~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~~~~~~~~~ 152 (262)
T cd05077 79 NIMVEEFVEFGPLDLFMHRK---SDVLTTPWKFKVAKQLASALSYLEDK---DLVHGNVCTKNILLAREGIDGECGPFIK 152 (262)
T ss_pred CEEEEecccCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHhhhC---CeECCCCCcccEEEecCCccCCCCceeE
Confidence 99999999999998887532 24588999999999999999999987 9999999999999987664 89
Q ss_pred EccccCCCCCCCCCCcccccCccccccCCCCccCC--CCCCCccchHhHHHHHHHHH-hCCCCCCCCCCccccchhhhcc
Q 004994 586 VSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFES--GSYSCQSDVYSLGVVMLELL-TGRKPYDRSRPRGEQSLVRWAI 662 (720)
Q Consensus 586 l~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~--~~~~~~~Dv~S~Gvvl~ell-tG~~Pf~~~~~~~~~~~~~~~~ 662 (720)
++|||++...... ....++..|+|||... ..++.++|||||||++|||+ +|+.||..........
T Consensus 153 l~d~g~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~------ 220 (262)
T cd05077 153 LSDPGIPITVLSR------QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKER------ 220 (262)
T ss_pred eCCCCCCccccCc------ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHHH------
Confidence 9999998765321 1234667899999873 46899999999999999998 5888886432111000
Q ss_pred cccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q 004994 663 PRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDL 716 (720)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L 716 (720)
........ ......++.+++.+||+.||.+||++.+|+++|
T Consensus 221 -----------~~~~~~~~--~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 221 -----------FYEGQCML--VTPSCKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred -----------HHhcCccC--CCCChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 00000000 001134678999999999999999999999886
No 222
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=1.6e-35 Score=305.55 Aligned_cols=252 Identities=20% Similarity=0.298 Sum_probs=192.5
Q ss_pred cCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccc---cccHHHHHHHHHHHHccCCCceeEEEeEecc--CCeE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQ---RQTDEEFLELASTISRLRHGNIVELIGYCNE--HGQH 513 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~---~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~--~~~~ 513 (720)
.+|...+.||+|+||.||+|.. .+++.||+|++...... ....+.+.+|+.++++++||||+++++++.+ .+..
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 3688899999999999999955 56899999998643221 2234568899999999999999999998865 4578
Q ss_pred EEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCC
Q 004994 514 LLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAP 593 (720)
Q Consensus 514 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~ 593 (720)
+++|||+++++|.+++.. ...+++.....++.++++||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 82 ~l~~e~~~~~~L~~~l~~----~~~l~~~~~~~~~~qi~~~l~~LH~~---~i~H~~l~p~nil~~~~~~~~l~dfg~~~ 154 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKA----YGALTESVTRKYTRQILEGMSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASK 154 (266)
T ss_pred EEEEeCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccCCCcc
Confidence 899999999999998853 23578888999999999999999987 89999999999999999999999999997
Q ss_pred CCCCCCC-cccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhh
Q 004994 594 LLFSGST-NELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDAL 671 (720)
Q Consensus 594 ~~~~~~~-~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (720)
.+..... ........++..|+|||.. ...++.++|||||||++|||++|+.||.........
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~---------------- 218 (266)
T cd06651 155 RLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAI---------------- 218 (266)
T ss_pred ccccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHHH----------------
Confidence 6532111 1111224467889999998 446889999999999999999999999653221110
Q ss_pred hhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 672 SRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 672 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
............+......+.+++ +||..+|++||+++||+++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~h 261 (266)
T cd06651 219 FKIATQPTNPQLPSHISEHARDFL-GCIFVEARHRPSAEELLRH 261 (266)
T ss_pred HHHhcCCCCCCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhcC
Confidence 000000000111222334566676 7888999999999999864
No 223
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=1.1e-35 Score=304.87 Aligned_cols=249 Identities=26% Similarity=0.467 Sum_probs=197.2
Q ss_pred CCCCCCeeccCCCceEEEEEeCCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEeeC
Q 004994 441 SFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDYG 520 (720)
Q Consensus 441 ~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 520 (720)
+|+..+.||+|+||.||+|...++..+|+|.+.... ....+|.+|++++++++||||+++++++......++||||+
T Consensus 5 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 81 (256)
T cd05112 5 ELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGA---MSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFM 81 (256)
T ss_pred HeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCC---CCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcC
Confidence 566678999999999999987778899999986432 23457889999999999999999999999999999999999
Q ss_pred CCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCCC
Q 004994 521 GNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGST 600 (720)
Q Consensus 521 ~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~~ 600 (720)
.+++|.+++... ...+++.....++.+++.||+|||+. +++||||||+||+++.++.+||+|||+++.......
T Consensus 82 ~~~~L~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~ 155 (256)
T cd05112 82 EHGCLSDYLRAQ---RGKFSQETLLGMCLDVCEGMAYLESS---NVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQY 155 (256)
T ss_pred CCCcHHHHHHhC---ccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccccceEEEcCCCeEEECCCcceeecccCcc
Confidence 999999988532 23578899999999999999999987 899999999999999999999999999876533211
Q ss_pred cccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcccccCchhhhhhhcCCC
Q 004994 601 NELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPS 678 (720)
Q Consensus 601 ~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (720)
. .......+.+|+|||.. .+.++.++|||||||++|||++ |+.||....... ..... ... .+...+.
T Consensus 156 ~-~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~---~~~~~----~~~---~~~~~~~ 224 (256)
T cd05112 156 T-SSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSE---VVETI----NAG---FRLYKPR 224 (256)
T ss_pred c-ccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHH---HHHHH----hCC---CCCCCCC
Confidence 1 11223345689999988 4678999999999999999998 999996533211 11100 000 0001111
Q ss_pred CCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q 004994 679 LDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDL 716 (720)
Q Consensus 679 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L 716 (720)
. .+.++.+++.+||+.+|++|||++|++++|
T Consensus 225 ~-------~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l 255 (256)
T cd05112 225 L-------ASQSVYELMQHCWKERPEDRPSFSLLLHQL 255 (256)
T ss_pred C-------CCHHHHHHHHHHcccChhhCCCHHHHHHhh
Confidence 1 235788999999999999999999999987
No 224
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=1.1e-35 Score=304.80 Aligned_cols=251 Identities=24% Similarity=0.353 Sum_probs=197.9
Q ss_pred CCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEecc-CCeEEEEEe
Q 004994 441 SFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNE-HGQHLLVYD 518 (720)
Q Consensus 441 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~-~~~~~lv~e 518 (720)
+|+..+.||+|++|.||++.. .+++.||+|++..........+.+..|++++++++|+|++++++.+.. ....+++||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG 80 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence 467789999999999999964 468899999997544334455678899999999999999999998764 446899999
Q ss_pred eCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCC
Q 004994 519 YGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSG 598 (720)
Q Consensus 519 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~ 598 (720)
|+++++|.+++... ....+++.+...++.+++.|++|||+. +++||||||+||+++.++.++|+|||++......
T Consensus 81 ~~~~~~l~~~l~~~--~~~~l~~~~~~~~~~~l~~~l~~lH~~---~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~ 155 (257)
T cd08223 81 FCEGGDLYHKLKEQ--KGKLLPENQVVEWFVQIAMALQYLHEK---HILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQ 155 (257)
T ss_pred ccCCCcHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCchhEEEecCCcEEEecccceEEeccc
Confidence 99999999988642 234588999999999999999999987 8999999999999999999999999999766322
Q ss_pred CCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcCC
Q 004994 599 STNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDP 677 (720)
Q Consensus 599 ~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (720)
. .......++..|+|||.. .+.++.++||||||+++|||++|+.||...+.... . ..+...
T Consensus 156 ~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~---~-------------~~~~~~ 217 (257)
T cd08223 156 C--DMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSL---V-------------YRIIEG 217 (257)
T ss_pred C--CccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHH---H-------------HHHHhc
Confidence 1 122334567889999998 55688999999999999999999999964321110 0 000000
Q ss_pred CCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 678 SLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 678 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.. ...+.....++.+++.+|++.+|++|||+.|++++
T Consensus 218 ~~-~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 254 (257)
T cd08223 218 KL-PPMPKDYSPELGELIATMLSKRPEKRPSVKSILRQ 254 (257)
T ss_pred CC-CCCccccCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 00 01112344678899999999999999999999875
No 225
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=8.9e-36 Score=313.55 Aligned_cols=255 Identities=26% Similarity=0.402 Sum_probs=195.9
Q ss_pred cCCCCCCeeccCCCceEEEEEe-CCCc----EEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL-PGGK----LLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHL 514 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~----~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~ 514 (720)
++|...+.||+|+||.||+|.. .+|. .||+|.+..... .....++.+|+.+++.++||||++++++|... ..+
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~ 84 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTG-PKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQ 84 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCC-HHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Cce
Confidence 4677788999999999999964 4454 578888864322 23345788999999999999999999998764 467
Q ss_pred EEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCC
Q 004994 515 LVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPL 594 (720)
Q Consensus 515 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~ 594 (720)
+++||+++|+|.+++... ...+++.....++.+++.||.|||+. +|+||||||+||++++++.+||+|||+++.
T Consensus 85 ~v~e~~~~g~l~~~~~~~---~~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dikp~Nill~~~~~~kL~Dfg~~~~ 158 (303)
T cd05110 85 LVTQLMPHGCLLDYVHEH---KDNIGSQLLLNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARL 158 (303)
T ss_pred eeehhcCCCCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHhhc---CeeccccccceeeecCCCceEEcccccccc
Confidence 999999999999998532 23578889999999999999999987 899999999999999999999999999987
Q ss_pred CCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcccccCchhhhh
Q 004994 595 LFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALS 672 (720)
Q Consensus 595 ~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (720)
+.............++..|+|||.. ...++.++|||||||++|||++ |+.||...........+.. ...
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~~~~-------~~~-- 229 (303)
T cd05110 159 LEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEK-------GER-- 229 (303)
T ss_pred ccCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHC-------CCC--
Confidence 6433222122233346689999988 4568999999999999999997 9999965322111111100 000
Q ss_pred hhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 673 RMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 673 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
. + ....++..+.+++.+||..+|++||+++++++.|+++
T Consensus 230 -~--~-----~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~ 268 (303)
T cd05110 230 -L--P-----QPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRM 268 (303)
T ss_pred -C--C-----CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 0 0 0111234678999999999999999999999999875
No 226
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=3.1e-36 Score=322.87 Aligned_cols=264 Identities=20% Similarity=0.290 Sum_probs=195.7
Q ss_pred HHhcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccC-----
Q 004994 437 QYTNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEH----- 510 (720)
Q Consensus 437 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~----- 510 (720)
...++|...+.||+|+||+||+|.. .+++.||||++..........+.+.+|++++++++||||+++++++...
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07878 12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIEN 91 (343)
T ss_pred hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccc
Confidence 4567899999999999999999954 5788999999975443334456678899999999999999999987532
Q ss_pred -CeEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccc
Q 004994 511 -GQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDC 589 (720)
Q Consensus 511 -~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DF 589 (720)
...++++|++ +++|.+++.. ..+++.....++.|+++||+|||+. +|+||||||+|||++.++.+||+||
T Consensus 92 ~~~~~~~~~~~-~~~l~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Df 162 (343)
T cd07878 92 FNEVYLVTNLM-GADLNNIVKC-----QKLSDEHVQFLIYQLLRGLKYIHSA---GIIHRDLKPSNVAVNEDCELRILDF 162 (343)
T ss_pred cCcEEEEeecC-CCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCChhhEEECCCCCEEEcCC
Confidence 3578999987 6788887742 3588899999999999999999987 9999999999999999999999999
Q ss_pred cCCCCCCCCCCcccccCccccccCCCCccCCC--CCCCccchHhHHHHHHHHHhCCCCCCCCCCccccc-hhhhcc----
Q 004994 590 GLAPLLFSGSTNELSEGLLTAHGSGAPEFESG--SYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQS-LVRWAI---- 662 (720)
Q Consensus 590 Gla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~--~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~-~~~~~~---- 662 (720)
|+++..... .....++..|+|||.+.+ .++.++|||||||++|||++|+.||.......... +.....
T Consensus 163 g~~~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 237 (343)
T cd07878 163 GLARQADDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSP 237 (343)
T ss_pred ccceecCCC-----cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCH
Confidence 999865322 223467889999998843 58999999999999999999999996543211100 000000
Q ss_pred ---cccCchhhhhhhcC--CCCCch----hhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 663 ---PRLHDIDALSRMVD--PSLDGA----YLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 663 ---~~~~~~~~~~~~~~--~~~~~~----~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
..+.. ........ +..... ......+.+.+++.+||+.||++|||++|++++
T Consensus 238 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~h 298 (343)
T cd07878 238 EVLKKISS-EHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAH 298 (343)
T ss_pred HHHHhcch-hhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00000 00000000 000000 001123457899999999999999999999975
No 227
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=5.4e-36 Score=328.96 Aligned_cols=262 Identities=18% Similarity=0.220 Sum_probs=193.7
Q ss_pred hcCCCCCCeeccCCCceEEEEEeC-CCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEE
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVY 517 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 517 (720)
...|...+.||+|+||.||+|... +++.||||.... ..+.+|++++++++|+|||++++++...+..++||
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~--------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~ 239 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY--------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVL 239 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc--------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEE
Confidence 457888999999999999999664 588999996421 24568999999999999999999999999999999
Q ss_pred eeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCC
Q 004994 518 DYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFS 597 (720)
Q Consensus 518 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~ 597 (720)
||+. ++|.+++... ...++|..+..++.|+++||.|||+. +||||||||+|||++.++.+||+|||+++.+..
T Consensus 240 e~~~-~~L~~~l~~~---~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~ 312 (461)
T PHA03211 240 PKYR-SDLYTYLGAR---LRPLGLAQVTAVARQLLSAIDYIHGE---GIIHRDIKTENVLVNGPEDICLGDFGAACFARG 312 (461)
T ss_pred EccC-CCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CEEECcCCHHHEEECCCCCEEEcccCCceeccc
Confidence 9986 6888877532 34689999999999999999999987 999999999999999999999999999987643
Q ss_pred CCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCc-c-------ccchhhhcccccCch
Q 004994 598 GSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPR-G-------EQSLVRWAIPRLHDI 668 (720)
Q Consensus 598 ~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~-~-------~~~~~~~~~~~~~~~ 668 (720)
...........|+..|+|||++ ...++.++|||||||++|||++|..|+...... . ...+++.......+.
T Consensus 313 ~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~ 392 (461)
T PHA03211 313 SWSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEF 392 (461)
T ss_pred ccccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccC
Confidence 3222223345689999999998 456899999999999999999988765322110 0 011111111000000
Q ss_pred ------hhhhhh-------cCCCCCchhh---HHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 669 ------DALSRM-------VDPSLDGAYL---AKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 669 ------~~~~~~-------~~~~~~~~~~---~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.....+ ..+....... ......+.+|+.+||+.||.+|||+.|++++
T Consensus 393 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h 455 (461)
T PHA03211 393 PQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL 455 (461)
T ss_pred CCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence 000000 0000000000 0122467899999999999999999999986
No 228
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=7.3e-36 Score=311.32 Aligned_cols=267 Identities=20% Similarity=0.324 Sum_probs=200.0
Q ss_pred cCCCCCCeeccCCCceEEEEEeC-CCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEe
Q 004994 440 NSFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYD 518 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 518 (720)
++|+..+.||+|++|.||+|... +|+.||+|++..........+.+.+|++++++++|+||+++++++......++|||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e 80 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE 80 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence 36778899999999999999664 68999999987543333344678899999999999999999999999999999999
Q ss_pred eCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCC
Q 004994 519 YGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSG 598 (720)
Q Consensus 519 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~ 598 (720)
|++++.|..+... ...+++..+..++.++++||+|||+. +++||||||+||+++.++.+||+|||++......
T Consensus 81 ~~~~~~l~~~~~~----~~~~~~~~~~~~~~ql~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 153 (286)
T cd07847 81 YCDHTVLNELEKN----PRGVPEHLIKKIIWQTLQAVNFCHKH---NCIHRDVKPENILITKQGQIKLCDFGFARILTGP 153 (286)
T ss_pred ccCccHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCChhhEEEcCCCcEEECccccceecCCC
Confidence 9999888877642 23588999999999999999999997 9999999999999999999999999999876433
Q ss_pred CCcccccCccccccCCCCccCC--CCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchh-hhcccccCc------h-
Q 004994 599 STNELSEGLLTAHGSGAPEFES--GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLV-RWAIPRLHD------I- 668 (720)
Q Consensus 599 ~~~~~~~~~~~~~~~~aPE~~~--~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~-~~~~~~~~~------~- 668 (720)
.. ......++..|+|||... ..++.++|||||||++|||+||+.||......+..... ......... .
T Consensus 154 ~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (286)
T cd07847 154 GD--DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTN 231 (286)
T ss_pred cc--cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccc
Confidence 21 112244677899999873 45789999999999999999999999754432211111 000000000 0
Q ss_pred hhhhhhcCCCCCc-----hhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 669 DALSRMVDPSLDG-----AYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 669 ~~~~~~~~~~~~~-----~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
........+.... ......+..+.+++.+||+.+|++||++.|++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~ 283 (286)
T cd07847 232 QFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEH 283 (286)
T ss_pred cccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcC
Confidence 0000000010000 0011234678899999999999999999999864
No 229
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.1e-35 Score=319.79 Aligned_cols=191 Identities=19% Similarity=0.255 Sum_probs=160.6
Q ss_pred HhcCCCCCCeeccCCCceEEEEEeC-CCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEE
Q 004994 438 YTNSFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLV 516 (720)
Q Consensus 438 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 516 (720)
...+|...+.||+|+||.||+|... +++.||+|..... ....|+.++++++|+||+++++++.+.+..++|
T Consensus 64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~--------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 135 (357)
T PHA03209 64 ASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG--------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMV 135 (357)
T ss_pred hhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc--------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEE
Confidence 3457999999999999999999664 5788999975432 234688999999999999999999999999999
Q ss_pred EeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCC
Q 004994 517 YDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLF 596 (720)
Q Consensus 517 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~ 596 (720)
|||+. ++|.+++.. ....+++..+.+++.|+++||.|||+. +||||||||+|||++.++.+||+|||+++...
T Consensus 136 ~e~~~-~~l~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~ 208 (357)
T PHA03209 136 LPHYS-SDLYTYLTK---RSRPLPIDQALIIEKQILEGLRYLHAQ---RIIHRDVKTENIFINDVDQVCIGDLGAAQFPV 208 (357)
T ss_pred EEccC-CcHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEecCccccccc
Confidence 99986 588887753 235689999999999999999999987 89999999999999999999999999997542
Q ss_pred CCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCC
Q 004994 597 SGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPY 646 (720)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf 646 (720)
.. .......++..|+|||++ ...++.++|||||||++|||+++..|+
T Consensus 209 ~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~ 256 (357)
T PHA03209 209 VA---PAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTI 256 (357)
T ss_pred cC---cccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence 21 112235678899999998 557899999999999999999865554
No 230
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=1e-35 Score=308.34 Aligned_cols=238 Identities=27% Similarity=0.422 Sum_probs=183.9
Q ss_pred eeccCCCceEEEEEeCC-------------------------CcEEEEEEecccccccccHHHHHHHHHHHHccCCCcee
Q 004994 447 FIGEGLLGSVYKAELPG-------------------------GKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIV 501 (720)
Q Consensus 447 ~lg~G~~g~Vy~~~~~~-------------------------g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv 501 (720)
.||+|+||.||+|.+.. ...||+|++.... .....+|.+|+++++.++||||+
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~~~~~~~~~l~h~niv 79 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSH--RDIALAFFETASLMSQVSHIHLA 79 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHH--HHHHHHHHHHHHHHhcCCCCCee
Confidence 59999999999996421 1358899886432 23446788999999999999999
Q ss_pred EEEeEeccCCeEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCC
Q 004994 502 ELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEK 581 (720)
Q Consensus 502 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~ 581 (720)
+++++|.+....++||||+++|+|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+|||++++
T Consensus 80 ~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~Nill~~~ 153 (274)
T cd05076 80 FVHGVCVRGSENIMVEEFVEHGPLDVCLRKE---KGRVPVAWKITVAQQLASALSYLEDK---NLVHGNVCAKNILLARL 153 (274)
T ss_pred eEEEEEEeCCceEEEEecCCCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHcC---CccCCCCCcccEEEecc
Confidence 9999999999999999999999999888532 34678889999999999999999987 89999999999999865
Q ss_pred C-------CeEEccccCCCCCCCCCCcccccCccccccCCCCccCC--CCCCCccchHhHHHHHHHHH-hCCCCCCCCCC
Q 004994 582 L-------IVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFES--GSYSCQSDVYSLGVVMLELL-TGRKPYDRSRP 651 (720)
Q Consensus 582 ~-------~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~--~~~~~~~Dv~S~Gvvl~ell-tG~~Pf~~~~~ 651 (720)
+ .+|++|||++...... ....++..|+|||.+. ..++.++|||||||++|||+ +|+.||.....
T Consensus 154 ~~~~~~~~~~kl~d~g~~~~~~~~------~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~ 227 (274)
T cd05076 154 GLAEGTSPFIKLSDPGVSFTALSR------EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTP 227 (274)
T ss_pred CcccCccceeeecCCccccccccc------cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccCh
Confidence 4 3799999998644221 1124567799999873 35899999999999999995 79999965432
Q ss_pred ccccchhhhcccccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 004994 652 RGEQSLVRWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLL 717 (720)
Q Consensus 652 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 717 (720)
........ . ...... .....+.+++.+||+.+|++|||+++|+++|.
T Consensus 228 ~~~~~~~~-------------~--~~~~~~----~~~~~~~~li~~cl~~~p~~Rps~~~il~~L~ 274 (274)
T cd05076 228 SEKERFYE-------------K--KHRLPE----PSCKELATLISQCLTYEPTQRPSFRTILRDLT 274 (274)
T ss_pred HHHHHHHH-------------h--ccCCCC----CCChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence 21110000 0 000000 11246789999999999999999999999874
No 231
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=1.5e-35 Score=303.69 Aligned_cols=252 Identities=21% Similarity=0.342 Sum_probs=201.3
Q ss_pred CCCCCCeeccCCCceEEEEE-eCCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEee
Q 004994 441 SFSEGNFIGEGLLGSVYKAE-LPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDY 519 (720)
Q Consensus 441 ~~~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 519 (720)
+|+..+.||+|+||.||.++ ..+++.+++|.+..........+.+.+|++++++++|+||+++++++.+.+..+++|||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~ 80 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY 80 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence 47778999999999999995 45689999999865433345556788999999999999999999999999999999999
Q ss_pred CCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCC
Q 004994 520 GGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGS 599 (720)
Q Consensus 520 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~ 599 (720)
+++++|.+++.... ...+++..+..++.++++||.|||+. +++||||||+||++++++.+||+|||+++......
T Consensus 81 ~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~ 155 (256)
T cd08221 81 ANGGTLYDKIVRQK--GQLFEEEMVLWYLFQIVSAVSYIHKA---GILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEY 155 (256)
T ss_pred cCCCcHHHHHHhcc--ccCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChHhEEEeCCCCEEECcCcceEEccccc
Confidence 99999999986432 34678999999999999999999987 89999999999999999999999999997663322
Q ss_pred CcccccCccccccCCCCccCC-CCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcCCC
Q 004994 600 TNELSEGLLTAHGSGAPEFES-GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPS 678 (720)
Q Consensus 600 ~~~~~~~~~~~~~~~aPE~~~-~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (720)
. ......++..|.|||... ..++.++||||||+++|||++|+.||........ ..++....
T Consensus 156 ~--~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~----------------~~~~~~~~ 217 (256)
T cd08221 156 S--MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNL----------------VVKIVQGN 217 (256)
T ss_pred c--cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHH----------------HHHHHcCC
Confidence 1 223345788999999884 4688999999999999999999999965332111 11111111
Q ss_pred CCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q 004994 679 LDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDL 716 (720)
Q Consensus 679 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L 716 (720)
... .....+.++.+++.+||+.+|++||+++|+++++
T Consensus 218 ~~~-~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~ 254 (256)
T cd08221 218 YTP-VVSVYSSELISLVHSLLQQDPEKRPTADEVLDQP 254 (256)
T ss_pred CCC-CccccCHHHHHHHHHHcccCcccCCCHHHHhhCc
Confidence 110 1122345688999999999999999999999864
No 232
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=1.2e-35 Score=306.81 Aligned_cols=257 Identities=21% Similarity=0.320 Sum_probs=198.6
Q ss_pred CCCCCCeeccCCCceEEEEEeCC--CcEEEEEEecccc--------cccccHHHHHHHHHHHHc-cCCCceeEEEeEecc
Q 004994 441 SFSEGNFIGEGLLGSVYKAELPG--GKLLAVKKLSNTV--------SQRQTDEEFLELASTISR-LRHGNIVELIGYCNE 509 (720)
Q Consensus 441 ~~~~~~~lg~G~~g~Vy~~~~~~--g~~vavK~l~~~~--------~~~~~~~~~~~e~~~l~~-l~H~niv~l~~~~~~ 509 (720)
+|+..+.||+|+||.||+|.... ++.+|+|.+.... .......++..|+.++.+ ++||||+++++++.+
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 36777899999999999997654 7899999985321 112233557778887765 799999999999999
Q ss_pred CCeEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccc
Q 004994 510 HGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDC 589 (720)
Q Consensus 510 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DF 589 (720)
.+..++||||+++++|.+++.........+++..+.+++.+++.||.|||+. .+++|+||||+||+++.++.+||+||
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~--~~i~H~dl~~~nil~~~~~~~~l~df 158 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKE--KRIVHRDLTPNNIMLGEDDKVTITDF 158 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccC--CceeecCCCHHHEEECCCCcEEEecc
Confidence 9999999999999999998854333345688899999999999999999963 27999999999999999999999999
Q ss_pred cCCCCCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCch
Q 004994 590 GLAPLLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDI 668 (720)
Q Consensus 590 Gla~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~ 668 (720)
|++....... ......++..|++||.. .+.++.++||||||+++|||++|+.||........ ..
T Consensus 159 g~~~~~~~~~---~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~---~~--------- 223 (269)
T cd08528 159 GLAKQKQPES---KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSL---AT--------- 223 (269)
T ss_pred cceeeccccc---ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHH---HH---------
Confidence 9997654322 22334567889999998 55689999999999999999999999964322110 00
Q ss_pred hhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q 004994 669 DALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLC 718 (720)
Q Consensus 669 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 718 (720)
.+.+...........+..+.+++.+||+.||++||++.|+..++++
T Consensus 224 ----~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~~ 269 (269)
T cd08528 224 ----KIVEAVYEPLPEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMISD 269 (269)
T ss_pred ----HHhhccCCcCCcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhcC
Confidence 0000000000011223568899999999999999999999999864
No 233
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=6.4e-36 Score=325.79 Aligned_cols=262 Identities=18% Similarity=0.236 Sum_probs=196.3
Q ss_pred hcCCCCCCeeccCCCceEEEEEeC---CCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEE
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAELP---GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLL 515 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~~---~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~l 515 (720)
..+|...+.||+|+||.||++... .+..||+|.+... +.+.+|++++++++|||||++++++...+..++
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-------~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~l 163 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-------KTPGREIDILKTISHRAIINLIHAYRWKSTVCM 163 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-------ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEE
Confidence 457888999999999999999643 3678999988643 234579999999999999999999999999999
Q ss_pred EEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCC
Q 004994 516 VYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLL 595 (720)
Q Consensus 516 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~ 595 (720)
||||+. ++|.+++. ....+++..+..++.|++.||.|||+. +||||||||+|||++.++.+||+|||+++.+
T Consensus 164 v~e~~~-~~l~~~l~----~~~~l~~~~~~~i~~ql~~aL~~LH~~---givHrDlkp~Nill~~~~~~~l~DfG~a~~~ 235 (392)
T PHA03207 164 VMPKYK-CDLFTYVD----RSGPLPLEQAITIQRRLLEALAYLHGR---GIIHRDVKTENIFLDEPENAVLGDFGAACKL 235 (392)
T ss_pred EehhcC-CCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEccCcccccc
Confidence 999987 58888773 235689999999999999999999987 9999999999999999999999999999876
Q ss_pred CCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhccc-------ccCc
Q 004994 596 FSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIP-------RLHD 667 (720)
Q Consensus 596 ~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~-------~~~~ 667 (720)
.............++..|+|||++ ...++.++|||||||++|||++|+.||................. .+..
T Consensus 236 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~ 315 (392)
T PHA03207 236 DAHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQ 315 (392)
T ss_pred CcccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCC
Confidence 544333333346789999999998 45789999999999999999999999965433211111100000 0000
Q ss_pred h------hhhhhhc---CCCCC-chh--hHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 668 I------DALSRMV---DPSLD-GAY--LAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 668 ~------~~~~~~~---~~~~~-~~~--~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
. ..+.... .+... ... ......++.+++.+||+.||++|||+.|++.+
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~ 375 (392)
T PHA03207 316 NGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL 375 (392)
T ss_pred ccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence 0 0000000 00000 000 01123467899999999999999999999875
No 234
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=8.7e-36 Score=310.33 Aligned_cols=254 Identities=24% Similarity=0.365 Sum_probs=191.5
Q ss_pred cCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHH-HHccCCCceeEEEeEeccCCeEEEEE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELAST-ISRLRHGNIVELIGYCNEHGQHLLVY 517 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~-l~~l~H~niv~l~~~~~~~~~~~lv~ 517 (720)
++|+..+.||+|+||.||+|.. .+|+.||+|+++...... ...++..|+.+ ++.++||||+++++++...+..+++|
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~ 79 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQ-EQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICM 79 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcH-HHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEh
Confidence 3678889999999999999965 469999999997543322 23344555554 66779999999999999999999999
Q ss_pred eeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCC
Q 004994 518 DYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFS 597 (720)
Q Consensus 518 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~ 597 (720)
||++ |+|.+++.........+++.....++.|++.||+|||+. .+++||||||+||+++.++.+||+|||+++....
T Consensus 80 e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~--~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~ 156 (283)
T cd06617 80 EVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSK--LSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVD 156 (283)
T ss_pred hhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhc--CCeecCCCCHHHEEECCCCCEEEeeccccccccc
Confidence 9997 588887754333345789999999999999999999974 2799999999999999999999999999986532
Q ss_pred CCCcccccCccccccCCCCccCC-----CCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhh
Q 004994 598 GSTNELSEGLLTAHGSGAPEFES-----GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALS 672 (720)
Q Consensus 598 ~~~~~~~~~~~~~~~~~aPE~~~-----~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (720)
.. ......++..|+|||.+. ..++.++|+|||||++|||++|+.||........ . ... ..
T Consensus 157 ~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~-~-~~~----------~~ 221 (283)
T cd06617 157 SV---AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQ-Q-LKQ----------VV 221 (283)
T ss_pred cc---ccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHH-H-HHH----------HH
Confidence 21 112234677899999873 3468899999999999999999999964221100 0 000 00
Q ss_pred hhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 673 RMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 673 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.-..+... ....+.++.+++.+||..+|++||++++++++
T Consensus 222 ~~~~~~~~---~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 261 (283)
T cd06617 222 EEPSPQLP---AEKFSPEFQDFVNKCLKKNYKERPNYPELLQH 261 (283)
T ss_pred hcCCCCCC---ccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00011111 11234678899999999999999999999863
No 235
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=1.5e-35 Score=313.97 Aligned_cols=197 Identities=22% Similarity=0.336 Sum_probs=158.4
Q ss_pred CCeeccCCCceEEEEEeC---CCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEecc--CCeEEEEEee
Q 004994 445 GNFIGEGLLGSVYKAELP---GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNE--HGQHLLVYDY 519 (720)
Q Consensus 445 ~~~lg~G~~g~Vy~~~~~---~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~--~~~~~lv~e~ 519 (720)
++.||+|+||+||+|... +++.||+|.+.... ....+.+|++++++++||||+++++++.. ....++||||
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~ 81 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG----ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDY 81 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC----CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEec
Confidence 468999999999999754 46789999986432 23457789999999999999999998854 4578899999
Q ss_pred CCCCCHHHHhhccc-----hhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEE----cCCCCeEEcccc
Q 004994 520 GGNCTLHDLLHSDE-----EAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILL----DEKLIVRVSDCG 590 (720)
Q Consensus 520 ~~~gsL~~~l~~~~-----~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl----~~~~~~kl~DFG 590 (720)
+++ +|.+++.... .....+++.....++.|++.||.|||+. +|+||||||+|||+ +.++.+||+|||
T Consensus 82 ~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG 157 (317)
T cd07868 82 AEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMG 157 (317)
T ss_pred cCC-CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEecCCCCcCcEEEeecC
Confidence 875 7877764321 1123578888999999999999999987 89999999999999 456799999999
Q ss_pred CCCCCCCCCC-cccccCccccccCCCCccCC--CCCCCccchHhHHHHHHHHHhCCCCCCCC
Q 004994 591 LAPLLFSGST-NELSEGLLTAHGSGAPEFES--GSYSCQSDVYSLGVVMLELLTGRKPYDRS 649 (720)
Q Consensus 591 la~~~~~~~~-~~~~~~~~~~~~~~aPE~~~--~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~ 649 (720)
+++....... ........++..|+|||++. ..++.++||||+||++|||++|+.||...
T Consensus 158 ~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~ 219 (317)
T cd07868 158 FARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred ceeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCC
Confidence 9987643211 11223456788999999873 35899999999999999999999999643
No 236
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=2.5e-36 Score=325.63 Aligned_cols=253 Identities=21% Similarity=0.304 Sum_probs=194.7
Q ss_pred cCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccc-cccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTV-SQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVY 517 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~-~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 517 (720)
++|+..+.||+|+||+||+|.. .+++.||||++.... ........+.+|++++.+++|+||+++++++.+.+..++||
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 3677889999999999999965 468999999997432 22334467888999999999999999999999999999999
Q ss_pred eeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCC
Q 004994 518 DYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFS 597 (720)
Q Consensus 518 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~ 597 (720)
||+++|+|.+++.. ...+++.....++.+++.||.|||+. +|+||||||+|||++.++.+||+|||+++.+..
T Consensus 81 E~~~gg~L~~~l~~----~~~l~~~~~~~~~~qi~~~L~~lH~~---givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~ 153 (360)
T cd05627 81 EFLPGGDMMTLLMK----KDTLSEEATQFYIAETVLAIDAIHQL---GFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKK 153 (360)
T ss_pred eCCCCccHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEeeccCCccccc
Confidence 99999999999853 34578888999999999999999987 999999999999999999999999999875532
Q ss_pred CCCc---------------------------------ccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCC
Q 004994 598 GSTN---------------------------------ELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGR 643 (720)
Q Consensus 598 ~~~~---------------------------------~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~ 643 (720)
.... .......|+..|+|||.+ ...++.++|||||||++|||+||+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~ 233 (360)
T cd05627 154 AHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGY 233 (360)
T ss_pred ccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCC
Confidence 1100 011134688999999998 556899999999999999999999
Q ss_pred CCCCCCCCccccc-hhhhcccccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCC---HHHHHHH
Q 004994 644 KPYDRSRPRGEQS-LVRWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPP---MSEIVQD 715 (720)
Q Consensus 644 ~Pf~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt---~~evl~~ 715 (720)
.||....+..... +..|.. .+ .+.+.. ....++.+++.+++ .||.+|++ ++|+++|
T Consensus 234 ~Pf~~~~~~~~~~~i~~~~~-~~--------~~p~~~------~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~h 293 (360)
T cd05627 234 PPFCSETPQETYRKVMNWKE-TL--------VFPPEV------PISEKAKDLILRFC-TDSENRIGSNGVEEIKSH 293 (360)
T ss_pred CCCCCCCHHHHHHHHHcCCC-ce--------ecCCCC------CCCHHHHHHHHHhc-cChhhcCCCCCHHHHhcC
Confidence 9997644322111 111100 00 001100 12346778888876 49999985 6777754
No 237
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=1.1e-36 Score=312.75 Aligned_cols=252 Identities=28% Similarity=0.447 Sum_probs=198.1
Q ss_pred CCCCCeeccCCCceEEEEEeC-CCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEeeC
Q 004994 442 FSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDYG 520 (720)
Q Consensus 442 ~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 520 (720)
|+..+.||+|+||+||++... +++.||+|++..............+|+.++++++||||+++++++.+....++||||+
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~ 80 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC 80 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence 345688999999999999664 5779999999865444444445567999999999999999999999999999999999
Q ss_pred CCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCCC
Q 004994 521 GNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGST 600 (720)
Q Consensus 521 ~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~~ 600 (720)
++++|.+++. ....+++..+..++.++++||.|||+. +|+||||||+||++++++.++|+|||.+.... ..
T Consensus 81 ~~~~L~~~l~----~~~~~~~~~~~~~~~qi~~~L~~Lh~~---~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~--~~ 151 (260)
T PF00069_consen 81 PGGSLQDYLQ----KNKPLSEEEILKIAYQILEALAYLHSK---GIVHRDIKPENILLDENGEVKLIDFGSSVKLS--EN 151 (260)
T ss_dssp TTEBHHHHHH----HHSSBBHHHHHHHHHHHHHHHHHHHHT---TEEESSBSGGGEEESTTSEEEESSGTTTEEST--ST
T ss_pred cccccccccc----ccccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccc--cc
Confidence 9999999996 346789999999999999999999997 99999999999999999999999999987541 11
Q ss_pred cccccCccccccCCCCccCC--CCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcCCC
Q 004994 601 NELSEGLLTAHGSGAPEFES--GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPS 678 (720)
Q Consensus 601 ~~~~~~~~~~~~~~aPE~~~--~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (720)
........++..|.|||... ..++.++||||+|+++|+|++|+.||.............. .....
T Consensus 152 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~-------------~~~~~ 218 (260)
T PF00069_consen 152 NENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEK-------------ILKRP 218 (260)
T ss_dssp TSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHH-------------HHHTH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhh-------------ccccc
Confidence 22334456788999999985 5689999999999999999999999975411111111110 00000
Q ss_pred CCchh--hHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 679 LDGAY--LAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 679 ~~~~~--~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
..... ......++.+++.+||+.||++||++.+++++
T Consensus 219 ~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~ 257 (260)
T PF00069_consen 219 LPSSSQQSREKSEELRDLIKKMLSKDPEQRPSAEELLKH 257 (260)
T ss_dssp HHHHTTSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTS
T ss_pred ccccccccchhHHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 00000 00112678999999999999999999999874
No 238
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=1.9e-35 Score=305.08 Aligned_cols=251 Identities=24% Similarity=0.387 Sum_probs=197.1
Q ss_pred CCCCCCeeccCCCceEEEEEe-CCCcEEEEEEeccccccc-------ccHHHHHHHHHHHHccCCCceeEEEeEeccCCe
Q 004994 441 SFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQR-------QTDEEFLELASTISRLRHGNIVELIGYCNEHGQ 512 (720)
Q Consensus 441 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~-------~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~ 512 (720)
+|...+.||+|++|.||+|.. .+++.||+|.+....... ...+.+.+|++++++++||||+++++++.+.+.
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH 80 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence 366778999999999999954 568899999986432211 123568899999999999999999999999999
Q ss_pred EEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCC
Q 004994 513 HLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLA 592 (720)
Q Consensus 513 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla 592 (720)
.++||||+++++|.+++.. ...+++.....++.+++.||+|||+. +++||||||+||++++++.+||+|||.+
T Consensus 81 ~~lv~e~~~~~~L~~~l~~----~~~l~~~~~~~~~~~l~~~l~~lH~~---~ivH~di~p~nil~~~~~~~~l~dfg~~ 153 (267)
T cd06628 81 LNIFLEYVPGGSVAALLNN----YGAFEETLVRNFVRQILKGLNYLHNR---GIIHRDIKGANILVDNKGGIKISDFGIS 153 (267)
T ss_pred cEEEEEecCCCCHHHHHHh----ccCccHHHHHHHHHHHHHHHHHHHhc---CcccccCCHHHEEEcCCCCEEecccCCC
Confidence 9999999999999999853 34578888999999999999999987 8999999999999999999999999999
Q ss_pred CCCCCCCCc----ccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCc
Q 004994 593 PLLFSGSTN----ELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHD 667 (720)
Q Consensus 593 ~~~~~~~~~----~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~ 667 (720)
+........ .......++..|+|||.. .+.++.++|||||||++|||++|+.||........ +.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~---~~-------- 222 (267)
T cd06628 154 KKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQA---IF-------- 222 (267)
T ss_pred cccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHH---HH--------
Confidence 876422111 111224467889999988 45688999999999999999999999975322110 00
Q ss_pred hhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 668 IDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 668 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.......+.. +...+..+.+++.+||+.||.+||++.|++++
T Consensus 223 --~~~~~~~~~~----~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 264 (267)
T cd06628 223 --KIGENASPEI----PSNISSEAIDFLEKTFEIDHNKRPTAAELLKH 264 (267)
T ss_pred --HHhccCCCcC----CcccCHHHHHHHHHHccCCchhCcCHHHHhhC
Confidence 0000111111 12234678899999999999999999999874
No 239
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=1.7e-35 Score=305.73 Aligned_cols=254 Identities=23% Similarity=0.328 Sum_probs=195.9
Q ss_pred HHhcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEE
Q 004994 437 QYTNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLL 515 (720)
Q Consensus 437 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~l 515 (720)
..++++.....||+|+||.||+|.. .++..||+|.+.... ....+.+.+|++++++++|+||+++++++...+..++
T Consensus 5 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 82 (268)
T cd06624 5 YEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERD--SRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKI 82 (268)
T ss_pred cccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCC--HHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEE
Confidence 3455666667899999999999964 568899999986442 2345678999999999999999999999999999999
Q ss_pred EEeeCCCCCHHHHhhccchhcccc--CHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcC-CCCeEEccccCC
Q 004994 516 VYDYGGNCTLHDLLHSDEEAHKKF--SWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDE-KLIVRVSDCGLA 592 (720)
Q Consensus 516 v~e~~~~gsL~~~l~~~~~~~~~~--~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~-~~~~kl~DFGla 592 (720)
|+||+++++|.+++.... ..+ ++..+..++.|+++||+|||+. +|+||||||+||+++. ++.+||+|||++
T Consensus 83 v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~h~dl~p~nil~~~~~~~~~l~dfg~~ 156 (268)
T cd06624 83 FMEQVPGGSLSALLRSKW---GPLKDNEQTIIFYTKQILEGLKYLHDN---QIVHRDIKGDNVLVNTYSGVVKISDFGTS 156 (268)
T ss_pred EEecCCCCCHHHHHHHhc---ccCCCcHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCeEEEecchhh
Confidence 999999999999986421 233 6778888999999999999987 9999999999999986 679999999998
Q ss_pred CCCCCCCCcccccCccccccCCCCccCCC---CCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchh
Q 004994 593 PLLFSGSTNELSEGLLTAHGSGAPEFESG---SYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDID 669 (720)
Q Consensus 593 ~~~~~~~~~~~~~~~~~~~~~~aPE~~~~---~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 669 (720)
....... .......++..|+|||+..+ .++.++|||||||++|||++|+.||........ ..+......
T Consensus 157 ~~~~~~~--~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~---~~~~~~~~~--- 228 (268)
T cd06624 157 KRLAGIN--PCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQA---AMFKVGMFK--- 228 (268)
T ss_pred eecccCC--CccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhh---hHhhhhhhc---
Confidence 7653221 11223456788999998732 378899999999999999999999964321110 000000000
Q ss_pred hhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 670 ALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 670 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
..+. .+....+++.+++.+||+.+|++|||+.|++++
T Consensus 229 -----~~~~----~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 265 (268)
T cd06624 229 -----IHPE----IPESLSAEAKNFILRCFEPDPDKRASAHDLLQD 265 (268)
T ss_pred -----cCCC----CCcccCHHHHHHHHHHcCCCchhCCCHHHHHhC
Confidence 0111 122234578899999999999999999999875
No 240
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=4.4e-36 Score=319.75 Aligned_cols=256 Identities=21% Similarity=0.273 Sum_probs=194.6
Q ss_pred cCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEeccc-ccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNT-VSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVY 517 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~-~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 517 (720)
++|...+.||+|+||+||++.. .+++.||+|++.+. .......+.+.+|..++..++|+||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 4688889999999999999965 46899999999642 222334566889999999999999999999999999999999
Q ss_pred eeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCC
Q 004994 518 DYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFS 597 (720)
Q Consensus 518 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~ 597 (720)
||+++|+|.+++.. ....+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++..+..
T Consensus 81 e~~~g~~L~~~l~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 154 (331)
T cd05597 81 DYYVGGDLLTLLSK---FEDRLPEDMARFYLAEMVLAIDSVHQL---GYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLA 154 (331)
T ss_pred ecCCCCcHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEECCCCHHHEEECCCCCEEEEECCceeecCC
Confidence 99999999999853 234578888999999999999999987 899999999999999999999999999876543
Q ss_pred CCCcccccCccccccCCCCccCC------CCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhh
Q 004994 598 GSTNELSEGLLTAHGSGAPEFES------GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDAL 671 (720)
Q Consensus 598 ~~~~~~~~~~~~~~~~~aPE~~~------~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (720)
... .......+++.|+|||.+. +.++.++|||||||++|||++|+.||...........+. ......
T Consensus 155 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~------~~~~~~ 227 (331)
T cd05597 155 DGT-VQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIM------NHKEHF 227 (331)
T ss_pred CCC-ccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHH------cCCCcc
Confidence 221 1122345789999999874 347889999999999999999999996533211100000 000000
Q ss_pred hhhcCCCCCchhhHHHHHHHHHHHHHHhccCCC--CCCCHHHHHHH
Q 004994 672 SRMVDPSLDGAYLAKSLSRFADIISRCVQWEPG--FRPPMSEIVQD 715 (720)
Q Consensus 672 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~--~RPt~~evl~~ 715 (720)
. +.+. ....+..+.+++.+|+..++. .||++++++++
T Consensus 228 -~-~~~~-----~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~h 266 (331)
T cd05597 228 -Q-FPPD-----VTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDH 266 (331)
T ss_pred -c-CCCc-----cCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 0 0000 111345678899998865443 37899999876
No 241
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=1.1e-35 Score=304.53 Aligned_cols=250 Identities=21% Similarity=0.298 Sum_probs=197.4
Q ss_pred CCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEee
Q 004994 441 SFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDY 519 (720)
Q Consensus 441 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 519 (720)
+|+..+.||+|+||.||++.. .+++.||+|.++.... ....+.+..|+.++++++|+||+++++++.+.+..++||||
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 79 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKS-SSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEY 79 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcc-hHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEee
Confidence 466778999999999999965 4689999999864322 33456788899999999999999999999999999999999
Q ss_pred CCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCC
Q 004994 520 GGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGS 599 (720)
Q Consensus 520 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~ 599 (720)
+++++|.+++... ....++......++.+++.||.|||+. +|+|+||||+||++++++.++++|||.++......
T Consensus 80 ~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~ 154 (255)
T cd08219 80 CDGGDLMQKIKLQ--RGKLFPEDTILQWFVQMCLGVQHIHEK---RVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPG 154 (255)
T ss_pred CCCCcHHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEECCCCcEEEcccCcceeecccc
Confidence 9999999987532 234578888999999999999999987 99999999999999999999999999997653321
Q ss_pred CcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcCCC
Q 004994 600 TNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPS 678 (720)
Q Consensus 600 ~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (720)
.......++..|+|||.. ...++.++||||||+++|+|++|+.||........ .. ......
T Consensus 155 --~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~---~~-------------~~~~~~ 216 (255)
T cd08219 155 --AYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNL---IL-------------KVCQGS 216 (255)
T ss_pred --cccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHH---HH-------------HHhcCC
Confidence 122234577889999998 44689999999999999999999999975332111 00 000000
Q ss_pred CCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 679 LDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 679 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
. ...+...+..+.+++.+||+.||++|||+.|++..
T Consensus 217 ~-~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 217 Y-KPLPSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred C-CCCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 0 00111233567899999999999999999999864
No 242
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=8.8e-36 Score=313.34 Aligned_cols=266 Identities=20% Similarity=0.279 Sum_probs=196.8
Q ss_pred cCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEe
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYD 518 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 518 (720)
++|...+.||+|+||.||+|.. .+++.||+|.+..... ......+.+|++++++++||||+++++++...+..++|||
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e 84 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHE-EGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFE 84 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccc-cCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEe
Confidence 4688889999999999999965 4688999999864432 2334567889999999999999999999999999999999
Q ss_pred eCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCC
Q 004994 519 YGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSG 598 (720)
Q Consensus 519 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~ 598 (720)
|++ ++|.+++... ...+++.....++.++++||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 85 ~~~-~~l~~~l~~~---~~~~~~~~~~~~~~qi~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 157 (301)
T cd07873 85 YLD-KDLKQYLDDC---GNSINMHNVKLFLFQLLRGLNYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAKSIP 157 (301)
T ss_pred ccc-cCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHHHEEECCCCcEEECcCcchhccCCC
Confidence 998 5888887532 34578888999999999999999987 9999999999999999999999999999764322
Q ss_pred CCcccccCccccccCCCCccCC--CCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcc--------cccCch
Q 004994 599 STNELSEGLLTAHGSGAPEFES--GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAI--------PRLHDI 668 (720)
Q Consensus 599 ~~~~~~~~~~~~~~~~aPE~~~--~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~--------~~~~~~ 668 (720)
. .......++..|+|||... ..++.++|||||||++|||+||+.||...........+.... +.+...
T Consensus 158 ~--~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (301)
T cd07873 158 T--KTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSN 235 (301)
T ss_pred C--CcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhcc
Confidence 1 1112234578899999873 357889999999999999999999997543321111000000 000000
Q ss_pred hhhhhhcCCCCCch----hhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 669 DALSRMVDPSLDGA----YLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 669 ~~~~~~~~~~~~~~----~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
+.......+..... .....+..+.+++.+||+.||.+|||++|++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h 286 (301)
T cd07873 236 EEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKH 286 (301)
T ss_pred ccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 00000000111000 011234568899999999999999999999874
No 243
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=1.5e-35 Score=306.62 Aligned_cols=256 Identities=23% Similarity=0.367 Sum_probs=196.2
Q ss_pred CCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccc--------cccHHHHHHHHHHHHccCCCceeEEEeEeccCC
Q 004994 441 SFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQ--------RQTDEEFLELASTISRLRHGNIVELIGYCNEHG 511 (720)
Q Consensus 441 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~--------~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~ 511 (720)
+|...+.||+|+||.||+|.. .+|+.||+|.++..... ....+.+.+|+++++.++|+||+++++++...+
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 366778999999999999954 57899999998632111 112346788999999999999999999999999
Q ss_pred eEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccC
Q 004994 512 QHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGL 591 (720)
Q Consensus 512 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGl 591 (720)
..++||||+++++|.+++... ..+++..+..++.+++.||.|||+. +++||||||+||+++.++.+||+|||+
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~----~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~~~nil~~~~~~~~l~d~~~ 154 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTY----GRFEEQLVRFFTEQVLEGLAYLHSK---GILHRDLKADNLLVDADGICKISDFGI 154 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHhhC---CeeecCCChhhEEEcCCCeEEEeeccc
Confidence 999999999999999998643 4678888999999999999999987 899999999999999999999999999
Q ss_pred CCCCCCCCCcccccCccccccCCCCccCC-C--CCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCch
Q 004994 592 APLLFSGSTNELSEGLLTAHGSGAPEFES-G--SYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDI 668 (720)
Q Consensus 592 a~~~~~~~~~~~~~~~~~~~~~~aPE~~~-~--~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~ 668 (720)
++...............++..|+|||... . .++.++||||||+++||+++|+.||........ ......
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~--~~~~~~------ 226 (272)
T cd06629 155 SKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAA--MFKLGN------ 226 (272)
T ss_pred cccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHH--HHHhhc------
Confidence 97653322111222345678899999873 2 378999999999999999999999964322110 000000
Q ss_pred hhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 669 DALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 669 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
....+..........+..+.+++.+||..+|++|||+++|+++
T Consensus 227 ----~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (272)
T cd06629 227 ----KRSAPPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQH 269 (272)
T ss_pred ----cccCCcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence 0000111111112234678899999999999999999999875
No 244
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=3.2e-36 Score=314.10 Aligned_cols=267 Identities=21% Similarity=0.350 Sum_probs=200.2
Q ss_pred cCCCCCCeeccCCCceEEEEEeC-CCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEe
Q 004994 440 NSFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYD 518 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 518 (720)
++|+..+.||+|+||.||+|... +++.||+|++.+........+.+.+|+++++.++||||+++++++...+..++|||
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE 80 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence 35777899999999999999764 58999999987544333445678899999999999999999999999999999999
Q ss_pred eCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCC
Q 004994 519 YGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSG 598 (720)
Q Consensus 519 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~ 598 (720)
|+++++|.++... ...+++..+..++.++++||.|||+. +++||||+|+||++++++.+||+|||++..+...
T Consensus 81 ~~~~~~l~~~~~~----~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~ 153 (286)
T cd07846 81 FVDHTVLDDLEKY----PNGLDESRVRKYLFQILRGIEFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAP 153 (286)
T ss_pred cCCccHHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCcEEEEeeeeeeeccCC
Confidence 9999988877643 23488999999999999999999987 8999999999999999999999999998765432
Q ss_pred CCcccccCccccccCCCCccCC--CCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCch--------
Q 004994 599 STNELSEGLLTAHGSGAPEFES--GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDI-------- 668 (720)
Q Consensus 599 ~~~~~~~~~~~~~~~~aPE~~~--~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~-------- 668 (720)
. .......++..|+|||+.. ..++.++|||||||++|||++|+.||...........+......+...
T Consensus 154 ~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (286)
T cd07846 154 G--EVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKN 231 (286)
T ss_pred c--cccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccc
Confidence 2 1122345678899999874 347889999999999999999999996543211110000000000000
Q ss_pred hhhhhhcCCCCCch-----hhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 669 DALSRMVDPSLDGA-----YLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 669 ~~~~~~~~~~~~~~-----~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.....+..+..... .....+..+.+++.+||+.+|++||++++++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 283 (286)
T cd07846 232 PLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHH 283 (286)
T ss_pred hHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcC
Confidence 00000111111000 011234678899999999999999999999875
No 245
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=1.7e-35 Score=308.04 Aligned_cols=249 Identities=22% Similarity=0.323 Sum_probs=195.0
Q ss_pred CCCCCeeccCCCceEEEEEeC-CCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEeeC
Q 004994 442 FSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDYG 520 (720)
Q Consensus 442 ~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 520 (720)
|+..+.||+|+||.||+|... ++..+++|.+.... ....+.+.+|+++++.++||||+++++++...+..++||||+
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~ 84 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKS--EEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFC 84 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCC--HHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEec
Confidence 455678999999999999654 57889999986432 334567889999999999999999999999999999999999
Q ss_pred CCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCCC
Q 004994 521 GNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGST 600 (720)
Q Consensus 521 ~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~~ 600 (720)
++++|.+++... ...+++..+..++.++++||.|||+. +++||||||+||+++.++.+||+|||++.......
T Consensus 85 ~~~~l~~~~~~~---~~~l~~~~~~~~~~qi~~~L~~LH~~---~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~- 157 (282)
T cd06643 85 AGGAVDAVMLEL---ERPLTEPQIRVVCKQTLEALNYLHEN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI- 157 (282)
T ss_pred CCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEccCCCEEEccccccccccccc-
Confidence 999999887532 34689999999999999999999987 99999999999999999999999999987653221
Q ss_pred cccccCccccccCCCCccCC------CCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhh
Q 004994 601 NELSEGLLTAHGSGAPEFES------GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRM 674 (720)
Q Consensus 601 ~~~~~~~~~~~~~~aPE~~~------~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (720)
.......++..|+|||+.. ..++.++|||||||++|||++|+.||........ ...... .
T Consensus 158 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~--~~~~~~-----------~ 223 (282)
T cd06643 158 -QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRV--LLKIAK-----------S 223 (282)
T ss_pred -cccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHH--HHHHhh-----------c
Confidence 1223345788999999862 2477899999999999999999999965332111 000000 0
Q ss_pred cCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 675 VDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 675 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
..+.. ..+...+.++.+++.+||+.||++||++++++++
T Consensus 224 ~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 262 (282)
T cd06643 224 EPPTL--AQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQH 262 (282)
T ss_pred CCCCC--CCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00000 0112234578899999999999999999999864
No 246
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=6.3e-36 Score=310.49 Aligned_cols=246 Identities=22% Similarity=0.359 Sum_probs=195.4
Q ss_pred CCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEeeC
Q 004994 442 FSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDYG 520 (720)
Q Consensus 442 ~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 520 (720)
|+..+.||+|+||.||+|.. .++..||+|.+..... ....+.+.+|++++++++||||+++++++......++||||+
T Consensus 6 y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06642 6 FTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEA-EDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred HHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccc-hHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEcc
Confidence 44457799999999999954 5688999999864432 234467889999999999999999999999999999999999
Q ss_pred CCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCCC
Q 004994 521 GNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGST 600 (720)
Q Consensus 521 ~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~~ 600 (720)
++++|.+++.. ..+++.....++.++++|+.|||+. +++|+||+|+||++++++.+||+|||++..+....
T Consensus 85 ~~~~L~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~---~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~- 155 (277)
T cd06642 85 GGGSALDLLKP-----GPLEETYIATILREILKGLDYLHSE---RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ- 155 (277)
T ss_pred CCCcHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHhcC---CeeccCCChheEEEeCCCCEEEccccccccccCcc-
Confidence 99999998842 4578899999999999999999986 99999999999999999999999999997664321
Q ss_pred cccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcCCCC
Q 004994 601 NELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSL 679 (720)
Q Consensus 601 ~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (720)
.......++..|+|||+. ...++.++|||||||++|||+||+.||....+... ... ......+.+
T Consensus 156 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~---~~~----------~~~~~~~~~ 221 (277)
T cd06642 156 -IKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRV---LFL----------IPKNSPPTL 221 (277)
T ss_pred -hhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhH---Hhh----------hhcCCCCCC
Confidence 112224567889999998 45689999999999999999999999864322111 000 000001111
Q ss_pred CchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 680 DGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 680 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
....+..+.+++.+||+.+|++||++.|++++
T Consensus 222 ----~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06642 222 ----EGQYSKPFKEFVEACLNKDPRFRPTAKELLKH 253 (277)
T ss_pred ----CcccCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 12234568899999999999999999999985
No 247
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=9.4e-36 Score=307.35 Aligned_cols=252 Identities=22% Similarity=0.316 Sum_probs=196.3
Q ss_pred cCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEe
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYD 518 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 518 (720)
++|...+.||+|+||.||+|.. .+++.||+|.++... ......+.+|+.+++.++||||+++++++...+..++|||
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e 86 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEP--GEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICME 86 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCc--hhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEe
Confidence 4566678899999999999965 568999999986432 2334567889999999999999999999999999999999
Q ss_pred eCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCC
Q 004994 519 YGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSG 598 (720)
Q Consensus 519 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~ 598 (720)
|+++++|.+++.. ...+++.+...++.+++.||.|||+. +++|+||||+||+++.++.+||+|||++..+...
T Consensus 87 ~~~~~~L~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~ 159 (267)
T cd06645 87 FCGGGSLQDIYHV----TGPLSESQIAYVSRETLQGLYYLHSK---GKMHRDIKGANILLTDNGHVKLADFGVSAQITAT 159 (267)
T ss_pred ccCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECcceeeeEccCc
Confidence 9999999998853 34688999999999999999999987 8999999999999999999999999998765322
Q ss_pred CCcccccCccccccCCCCccC----CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhh
Q 004994 599 STNELSEGLLTAHGSGAPEFE----SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRM 674 (720)
Q Consensus 599 ~~~~~~~~~~~~~~~~aPE~~----~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (720)
........++..|+|||.. .+.++.++|||||||++|||++|+.||....+........ ... .
T Consensus 160 --~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~--~~~---------~ 226 (267)
T cd06645 160 --IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMT--KSN---------F 226 (267)
T ss_pred --ccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhh--ccC---------C
Confidence 1112334678899999986 3458899999999999999999999986433211110000 000 0
Q ss_pred cCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 675 VDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 675 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
..+.... ....+..+.+++.+||+.+|++||++++++++
T Consensus 227 ~~~~~~~--~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~ 265 (267)
T cd06645 227 QPPKLKD--KMKWSNSFHHFVKMALTKNPKKRPTAEKLLQH 265 (267)
T ss_pred CCCcccc--cCCCCHHHHHHHHHHccCCchhCcCHHHHhcC
Confidence 0011100 00123467899999999999999999999874
No 248
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=2.4e-35 Score=303.96 Aligned_cols=258 Identities=26% Similarity=0.375 Sum_probs=202.8
Q ss_pred cCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEe
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYD 518 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 518 (720)
++|+..+.||.|+||+||+|.. .++..+|+|++....... ....+.+|+++++.++|+||+++++.+...+..++|||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 79 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQT-SVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMP 79 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcch-HHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEe
Confidence 4688899999999999999965 468899999987543322 55788999999999999999999999999999999999
Q ss_pred eCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCC
Q 004994 519 YGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSG 598 (720)
Q Consensus 519 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~ 598 (720)
|+++++|.+++..... ...+++.....++.+++.||+|||+. +++||||||+||++++++.+||+|||++..+...
T Consensus 80 ~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~ql~~al~~lh~~---~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~ 155 (267)
T cd06610 80 YLSGGSLLDIMKSSYP-RGGLDEAIIATVLKEVLKGLEYLHSN---GQIHRDIKAGNILLGEDGSVKIADFGVSASLADG 155 (267)
T ss_pred ccCCCcHHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccchHHHhccC
Confidence 9999999999864221 24688999999999999999999987 9999999999999999999999999998776543
Q ss_pred CCcc--cccCccccccCCCCccCC-C-CCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhh
Q 004994 599 STNE--LSEGLLTAHGSGAPEFES-G-SYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRM 674 (720)
Q Consensus 599 ~~~~--~~~~~~~~~~~~aPE~~~-~-~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (720)
.... ......++..|++||... . .++.++|||||||++|||++|+.||........ ..+....
T Consensus 156 ~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~--~~~~~~~----------- 222 (267)
T cd06610 156 GDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKV--LMLTLQN----------- 222 (267)
T ss_pred ccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhh--HHHHhcC-----------
Confidence 3221 223345778899999873 3 589999999999999999999999975432211 1111000
Q ss_pred cCCCCCch-hhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 675 VDPSLDGA-YLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 675 ~~~~~~~~-~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
..+..... .....+.++.+++.+||+.||++|||++|++++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~ 264 (267)
T cd06610 223 DPPSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKH 264 (267)
T ss_pred CCCCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 00111100 012334678899999999999999999999875
No 249
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=9.2e-36 Score=310.92 Aligned_cols=267 Identities=24% Similarity=0.352 Sum_probs=200.3
Q ss_pred CCCCCCeeccCCCceEEEEEeC-CCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEee
Q 004994 441 SFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDY 519 (720)
Q Consensus 441 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 519 (720)
+|+..+.||+|+||.||+|... +++.||+|++..........+.+.+|++++++++|+||+++++++.+.+..++||||
T Consensus 2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 81 (288)
T cd07833 2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEY 81 (288)
T ss_pred ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEec
Confidence 5778899999999999999654 688999999875544444557889999999999999999999999999999999999
Q ss_pred CCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCC
Q 004994 520 GGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGS 599 (720)
Q Consensus 520 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~ 599 (720)
++++.+..+... ...+++.....++.++++||+|||+. +++||||+|+||++++++.+||+|||++.......
T Consensus 82 ~~~~~l~~~~~~----~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~ 154 (288)
T cd07833 82 VERTLLELLEAS----PGGLPPDAVRSYIWQLLQAIAYCHSH---NIIHRDIKPENILVSESGVLKLCDFGFARALRARP 154 (288)
T ss_pred CCCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEEeeecccccCCCc
Confidence 998777665532 24478899999999999999999987 89999999999999999999999999998764432
Q ss_pred CcccccCccccccCCCCccC-CC-CCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCc--------hh
Q 004994 600 TNELSEGLLTAHGSGAPEFE-SG-SYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHD--------ID 669 (720)
Q Consensus 600 ~~~~~~~~~~~~~~~aPE~~-~~-~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~--------~~ 669 (720)
.. ......++.+|+|||+. .. .++.++||||||+++|||++|+.||......+...........+.. ..
T Consensus 155 ~~-~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (288)
T cd07833 155 AS-PLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNP 233 (288)
T ss_pred cc-cccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCc
Confidence 21 12234567889999998 44 6789999999999999999999999754321111000000000000 00
Q ss_pred hhh--hhcCCCCC----chhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 670 ALS--RMVDPSLD----GAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 670 ~~~--~~~~~~~~----~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
... +..+.... ..++...+.++.+++.+||..+|++|||+++++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 285 (288)
T cd07833 234 RFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQH 285 (288)
T ss_pred cccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcC
Confidence 000 00011000 01122235778999999999999999999999864
No 250
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=2.2e-35 Score=306.02 Aligned_cols=258 Identities=25% Similarity=0.371 Sum_probs=199.6
Q ss_pred cCCCCCCeeccCCCceEEEEEeC------CCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAELP------GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQH 513 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~ 513 (720)
++|...+.||+|+||+||+|..+ +.+.|++|.+.... .....+.+.+|++++++++|+||+++++++.+.+..
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 83 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTK-DENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPH 83 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCcc-chHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcc
Confidence 46778899999999999999753 34679999886432 122456789999999999999999999999999999
Q ss_pred EEEEeeCCCCCHHHHhhccchh-----ccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEcc
Q 004994 514 LLVYDYGGNCTLHDLLHSDEEA-----HKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSD 588 (720)
Q Consensus 514 ~lv~e~~~~gsL~~~l~~~~~~-----~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~D 588 (720)
++||||+++|+|.+++...... ...+++..+..++.++++||+|||+. +|+||||||+||+++.++.+|++|
T Consensus 84 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~~ 160 (275)
T cd05046 84 YMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNA---RFVHRDLAARNCLVSSQREVKVSL 160 (275)
T ss_pred eEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhc---CcccCcCccceEEEeCCCcEEEcc
Confidence 9999999999999998643211 12689999999999999999999987 899999999999999999999999
Q ss_pred ccCCCCCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcccccC
Q 004994 589 CGLAPLLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLH 666 (720)
Q Consensus 589 FGla~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~ 666 (720)
||+++....... .......++..|+|||.. .+.++.++|||||||++|||++ |..||....... .....
T Consensus 161 ~~~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~---~~~~~----- 231 (275)
T cd05046 161 LSLSKDVYNSEY-YKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEE---VLNRL----- 231 (275)
T ss_pred cccccccCcccc-cccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHH---HHHHH-----
Confidence 999875532221 112223456679999987 5568899999999999999999 888986432211 11110
Q ss_pred chhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q 004994 667 DIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLC 718 (720)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 718 (720)
.............+..+.+++.+||+.+|++|||+.|+++.|.+
T Consensus 232 --------~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~~ 275 (275)
T cd05046 232 --------QAGKLELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALGE 275 (275)
T ss_pred --------HcCCcCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhcC
Confidence 00000000111233578899999999999999999999999864
No 251
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.6e-35 Score=310.57 Aligned_cols=250 Identities=22% Similarity=0.342 Sum_probs=198.8
Q ss_pred hcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEE
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVY 517 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 517 (720)
..+|...+.||+|+||.||+|.. .+++.||+|.+.... ....+.+.+|+.+++.++|+||+++++++...+..++||
T Consensus 18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~ 95 (297)
T cd06656 18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQ--QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM 95 (297)
T ss_pred hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCc--cchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEee
Confidence 36788899999999999999964 579999999986432 233467889999999999999999999999999999999
Q ss_pred eeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCC
Q 004994 518 DYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFS 597 (720)
Q Consensus 518 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~ 597 (720)
||+++++|.+++.. ..+++..+..++.+++.||.|||+. +++||||||+||+++.++.+||+|||++.....
T Consensus 96 e~~~~~~L~~~~~~-----~~~~~~~~~~~~~~l~~~L~~LH~~---~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~ 167 (297)
T cd06656 96 EYLAGGSLTDVVTE-----TCMDEGQIAAVCRECLQALDFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP 167 (297)
T ss_pred cccCCCCHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEECcCccceEccC
Confidence 99999999998842 3478889999999999999999987 999999999999999999999999999876533
Q ss_pred CCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcC
Q 004994 598 GSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVD 676 (720)
Q Consensus 598 ~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (720)
... ......++..|++||.. ...++.++|||||||++|+|++|+.||....+....... +.. . .
T Consensus 168 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~-~~~-~-----------~ 232 (297)
T cd06656 168 EQS--KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLI-ATN-G-----------T 232 (297)
T ss_pred Ccc--CcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeee-ccC-C-----------C
Confidence 221 12234567889999988 456889999999999999999999999654322111000 000 0 0
Q ss_pred CCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 677 PSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 677 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
+.. ..+...+..+.+++.+||+.+|++||++++++++
T Consensus 233 ~~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (297)
T cd06656 233 PEL--QNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQH 269 (297)
T ss_pred CCC--CCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000 0112233567899999999999999999999873
No 252
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=1.7e-35 Score=303.46 Aligned_cols=251 Identities=22% Similarity=0.334 Sum_probs=199.0
Q ss_pred CCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEee
Q 004994 441 SFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDY 519 (720)
Q Consensus 441 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 519 (720)
+|+..+.||+|+||.||++.. .+|+.||+|++..........+++.+|++++++++||||+++++++.+.+..++||||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY 80 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence 467789999999999999954 5789999999865433334456889999999999999999999999999999999999
Q ss_pred CCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCC
Q 004994 520 GGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGS 599 (720)
Q Consensus 520 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~ 599 (720)
+.+++|.+.+... ....+++.+..+++.+++.||.|||+. +++|+||+|+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~ 155 (256)
T cd08218 81 CEGGDLYKKINAQ--RGVLFPEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTV 155 (256)
T ss_pred CCCCcHHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEEeeccceeecCcch
Confidence 9999999988632 123578889999999999999999987 89999999999999999999999999997653321
Q ss_pred CcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcCCC
Q 004994 600 TNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPS 678 (720)
Q Consensus 600 ~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (720)
.......++..|+|||+. .+.++.++|||||||+++||+||+.||........ + ..+....
T Consensus 156 --~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~---~-------------~~~~~~~ 217 (256)
T cd08218 156 --ELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNL---V-------------LKIIRGS 217 (256)
T ss_pred --hhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHH---H-------------HHHhcCC
Confidence 112234467789999998 55688999999999999999999999964322110 0 1111100
Q ss_pred CCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 679 LDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 679 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.. ..+.....++.+++.+||+.+|++||++.||+++
T Consensus 218 ~~-~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~ 253 (256)
T cd08218 218 YP-PVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEK 253 (256)
T ss_pred CC-CCcccCCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 00 0112234578899999999999999999999975
No 253
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=1.9e-35 Score=306.37 Aligned_cols=248 Identities=26% Similarity=0.374 Sum_probs=198.5
Q ss_pred CCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEee
Q 004994 441 SFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDY 519 (720)
Q Consensus 441 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 519 (720)
+|+..+.||.|++|.||+|.. .+++.||+|.+.... .......+.+|+++++.++|+||+++++++.+....++|+||
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (274)
T cd06609 2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEE-AEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEY 80 (274)
T ss_pred hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccc-cchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEe
Confidence 577788999999999999965 468999999986442 233446788999999999999999999999999999999999
Q ss_pred CCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCC
Q 004994 520 GGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGS 599 (720)
Q Consensus 520 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~ 599 (720)
+++++|.+++... .+++.....++.+++.||.|||+. +++||||+|+||++++++.++|+|||+++.+....
T Consensus 81 ~~~~~L~~~~~~~-----~~~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~ 152 (274)
T cd06609 81 CGGGSCLDLLKPG-----KLDETYIAFILREVLLGLEYLHEE---GKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTM 152 (274)
T ss_pred eCCCcHHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEcccccceeecccc
Confidence 9999999998532 688999999999999999999987 89999999999999999999999999998774332
Q ss_pred CcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcCCC
Q 004994 600 TNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPS 678 (720)
Q Consensus 600 ~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (720)
. ......++..|+|||+. ...++.++|||||||++|||+||+.||....+...... ......+.
T Consensus 153 ~--~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~-------------~~~~~~~~ 217 (274)
T cd06609 153 S--KRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFL-------------IPKNNPPS 217 (274)
T ss_pred c--ccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHH-------------hhhcCCCC
Confidence 1 12234567789999988 45689999999999999999999999965432111000 00001111
Q ss_pred CCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 679 LDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 679 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.... ..+..+.+++.+||+.+|++|||+++++++
T Consensus 218 ~~~~---~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~ 251 (274)
T cd06609 218 LEGN---KFSKPFKDFVSLCLNKDPKERPSAKELLKH 251 (274)
T ss_pred Cccc---ccCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 1111 034568899999999999999999999864
No 254
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-36 Score=320.05 Aligned_cols=249 Identities=25% Similarity=0.344 Sum_probs=203.1
Q ss_pred CCCeeccCCCceEEEEEeC--CCc--EEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEee
Q 004994 444 EGNFIGEGLLGSVYKAELP--GGK--LLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDY 519 (720)
Q Consensus 444 ~~~~lg~G~~g~Vy~~~~~--~g~--~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 519 (720)
..++||+|.||+|++|.|. +|+ .||||.++..... ....+|++|+.+|.+|+|+|+|+|||+..+ ....||||+
T Consensus 114 l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~-~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~EL 191 (1039)
T KOG0199|consen 114 LYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLN-AIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFEL 191 (1039)
T ss_pred HHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccc-hhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhhh
Confidence 3478999999999999764 354 5899999865433 266799999999999999999999999987 678899999
Q ss_pred CCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCC
Q 004994 520 GGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGS 599 (720)
Q Consensus 520 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~ 599 (720)
++.|+|.+.|+. .....|-......++.|||.||+||... ++|||||..+|+|+.....|||+|||+.+-+...+
T Consensus 192 aplGSLldrLrk--a~~~~llv~~Lcdya~QiA~aM~YLesk---rlvHRDLAARNlllasprtVKI~DFGLmRaLg~ne 266 (1039)
T KOG0199|consen 192 APLGSLLDRLRK--AKKAILLVSRLCDYAMQIAKAMQYLESK---RLVHRDLAARNLLLASPRTVKICDFGLMRALGENE 266 (1039)
T ss_pred cccchHHHHHhh--ccccceeHHHHHHHHHHHHHHHHHHhhh---hhhhhhhhhhhheecccceeeeecccceeccCCCC
Confidence 999999999986 2345677778889999999999999987 89999999999999999999999999999887665
Q ss_pred Ccccc-cCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcccccCchhhhhhhcC
Q 004994 600 TNELS-EGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVD 676 (720)
Q Consensus 600 ~~~~~-~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (720)
..+.. ....-...|+|||.+ .+.|+.++|||+|||.+|||+| |+.||.+...... .+.+|
T Consensus 267 d~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qI-----------------L~~iD 329 (1039)
T KOG0199|consen 267 DMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQI-----------------LKNID 329 (1039)
T ss_pred cceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHHH-----------------HHhcc
Confidence 44433 223335579999998 7889999999999999999998 9999976433221 11222
Q ss_pred CCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q 004994 677 PSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDL 716 (720)
Q Consensus 677 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L 716 (720)
....-..+..|++.+.++++.||..+|++|||+.+|.+++
T Consensus 330 ~~erLpRPk~csedIY~imk~cWah~paDRptFsair~~~ 369 (1039)
T KOG0199|consen 330 AGERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDL 369 (1039)
T ss_pred ccccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHhH
Confidence 2222223556788999999999999999999999997544
No 255
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=2e-35 Score=309.66 Aligned_cols=249 Identities=22% Similarity=0.363 Sum_probs=198.8
Q ss_pred cCCCCCCeeccCCCceEEEEE-eCCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEe
Q 004994 440 NSFSEGNFIGEGLLGSVYKAE-LPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYD 518 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 518 (720)
.+|+..+.||.|++|.||+|. ..+|+.||+|.+.... ....+.+.+|+++++.++||||+++++++.+.+..++|||
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 96 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQK--QPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVME 96 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEeccc--CchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEE
Confidence 457888999999999999995 4678999999986432 2345678899999999999999999999999999999999
Q ss_pred eCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCC
Q 004994 519 YGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSG 598 (720)
Q Consensus 519 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~ 598 (720)
|+++++|.+++.. ..+++.++..++.+++.||+|||+. +++||||||+||+++.++.+||+|||++......
T Consensus 97 ~~~~~~L~~~~~~-----~~l~~~~~~~i~~~l~~al~~LH~~---~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~ 168 (296)
T cd06655 97 YLAGGSLTDVVTE-----TCMDEAQIAAVCRECLQALEFLHAN---QVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPE 168 (296)
T ss_pred ecCCCcHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccchhcccc
Confidence 9999999998842 3578999999999999999999987 9999999999999999999999999998765432
Q ss_pred CCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcCC
Q 004994 599 STNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDP 677 (720)
Q Consensus 599 ~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (720)
.. ......++..|+|||.. ...++.++|||||||++|||++|+.||............. .. ..+
T Consensus 169 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~--~~-----------~~~ 233 (296)
T cd06655 169 QS--KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIA--TN-----------GTP 233 (296)
T ss_pred cc--cCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH--hc-----------CCc
Confidence 21 12234577889999988 4568999999999999999999999997543221110000 00 000
Q ss_pred CCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 678 SLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 678 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.+ ..+...+..+.+++.+||..||++|||+.+++++
T Consensus 234 ~~--~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~ 269 (296)
T cd06655 234 EL--QNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQH 269 (296)
T ss_pred cc--CCcccCCHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence 00 0112234568899999999999999999999864
No 256
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=7.9e-36 Score=318.03 Aligned_cols=256 Identities=22% Similarity=0.248 Sum_probs=195.2
Q ss_pred cCCCCCCeeccCCCceEEEEEeC-CCcEEEEEEecccc-cccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTV-SQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVY 517 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~-~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 517 (720)
++|...+.||+|+||+||++... +++.||+|++.+.. ........+.+|+.++..++|+||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 36788899999999999999764 57899999986422 22233456888999999999999999999999999999999
Q ss_pred eeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCC
Q 004994 518 DYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFS 597 (720)
Q Consensus 518 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~ 597 (720)
||+++|+|.+++... ...+++.....++.+++.||.|||+. +|+||||||+|||++.++.+||+|||+++.+..
T Consensus 81 ey~~~g~L~~~l~~~---~~~l~~~~~~~~~~qi~~al~~lH~~---~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~ 154 (332)
T cd05623 81 DYYVGGDLLTLLSKF---EDRLPEDMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFGSCLKLME 154 (332)
T ss_pred eccCCCcHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEeecchheeccc
Confidence 999999999999632 34578888999999999999999987 999999999999999999999999999976533
Q ss_pred CCCcccccCccccccCCCCccCC------CCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhh
Q 004994 598 GSTNELSEGLLTAHGSGAPEFES------GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDAL 671 (720)
Q Consensus 598 ~~~~~~~~~~~~~~~~~aPE~~~------~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (720)
... .......++..|+|||++. +.++.++|||||||++|||++|+.||...........+. ....
T Consensus 155 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~------~~~~-- 225 (332)
T cd05623 155 DGT-VQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIM------NHKE-- 225 (332)
T ss_pred CCc-ceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHh------CCCc--
Confidence 221 1222346889999999873 357899999999999999999999997543211111000 0000
Q ss_pred hhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCC--CCCHHHHHHH
Q 004994 672 SRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGF--RPPMSEIVQD 715 (720)
Q Consensus 672 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~--RPt~~evl~~ 715 (720)
+ .... ......+.++.+++.+|+..++.+ |++++|++++
T Consensus 226 -~---~~~p-~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 226 -R---FQFP-AQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred -c---ccCC-CccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 0 0000 011123467789999988665544 6899999876
No 257
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=8e-36 Score=310.81 Aligned_cols=266 Identities=20% Similarity=0.273 Sum_probs=195.0
Q ss_pred CCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEee
Q 004994 441 SFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDY 519 (720)
Q Consensus 441 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 519 (720)
+|+..+.||+|+||.||+|.. .+|+.||+|++............+.+|++++++++|+||+++++++.+.+..++|+||
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY 80 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence 366778999999999999965 4789999999975433333445678899999999999999999999999999999999
Q ss_pred CCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCC
Q 004994 520 GGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGS 599 (720)
Q Consensus 520 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~ 599 (720)
+++ +|.+++... ...+++.....++.|+++||.|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 81 ~~~-~l~~~~~~~---~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~ 153 (284)
T cd07839 81 CDQ-DLKKYFDSC---NGDIDPEIVKSFMFQLLKGLAFCHSH---NVLHRDLKPQNLLINKNGELKLADFGLARAFGIPV 153 (284)
T ss_pred CCC-CHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEcCCCcEEECccchhhccCCCC
Confidence 985 787776532 34588999999999999999999987 89999999999999999999999999997653221
Q ss_pred CcccccCccccccCCCCccCCC--CCCCccchHhHHHHHHHHHhCCCCCCCCCCcccc-chh-hhcc-cccCchhhhhhh
Q 004994 600 TNELSEGLLTAHGSGAPEFESG--SYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQ-SLV-RWAI-PRLHDIDALSRM 674 (720)
Q Consensus 600 ~~~~~~~~~~~~~~~aPE~~~~--~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~-~~~-~~~~-~~~~~~~~~~~~ 674 (720)
. ......++..|+|||.+.+ .++.++|||||||++|||+||..|+.......+. ..+ +... +...........
T Consensus 154 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (284)
T cd07839 154 R--CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKL 231 (284)
T ss_pred C--CcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhc
Confidence 1 1122345778999998733 4789999999999999999999986433221110 000 0000 000000000000
Q ss_pred cCC----CCCc-----hhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 675 VDP----SLDG-----AYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 675 ~~~----~~~~-----~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.+. .... ......+.++.+++.+||+.||++|||++|++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h 281 (284)
T cd07839 232 PDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQH 281 (284)
T ss_pred ccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcC
Confidence 000 0000 0111234678899999999999999999999875
No 258
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=4e-35 Score=310.67 Aligned_cols=197 Identities=22% Similarity=0.342 Sum_probs=158.4
Q ss_pred CCeeccCCCceEEEEEeC---CCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEec--cCCeEEEEEee
Q 004994 445 GNFIGEGLLGSVYKAELP---GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCN--EHGQHLLVYDY 519 (720)
Q Consensus 445 ~~~lg~G~~g~Vy~~~~~---~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~--~~~~~~lv~e~ 519 (720)
+..||+|+||+||+|... ++..||+|.+.... ....+.+|++++++++||||+++++++. .....++||||
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~ 81 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG----ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDY 81 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC----CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEee
Confidence 468999999999999764 45789999986432 2346788999999999999999999884 35678999999
Q ss_pred CCCCCHHHHhhccc-----hhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEE----cCCCCeEEcccc
Q 004994 520 GGNCTLHDLLHSDE-----EAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILL----DEKLIVRVSDCG 590 (720)
Q Consensus 520 ~~~gsL~~~l~~~~-----~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl----~~~~~~kl~DFG 590 (720)
+++ +|.+++.... .....+++.....++.|++.||.|||+. +|+||||||+|||+ +.++.+||+|||
T Consensus 82 ~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG 157 (317)
T cd07867 82 AEH-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMG 157 (317)
T ss_pred eCC-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEccCCCCCCcEEEeecc
Confidence 885 7777764221 1223578889999999999999999987 89999999999999 566799999999
Q ss_pred CCCCCCCCCCc-ccccCccccccCCCCccCC--CCCCCccchHhHHHHHHHHHhCCCCCCCC
Q 004994 591 LAPLLFSGSTN-ELSEGLLTAHGSGAPEFES--GSYSCQSDVYSLGVVMLELLTGRKPYDRS 649 (720)
Q Consensus 591 la~~~~~~~~~-~~~~~~~~~~~~~aPE~~~--~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~ 649 (720)
+++........ .......++..|+|||.+. ..++.++|||||||++|||+||+.||...
T Consensus 158 ~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~ 219 (317)
T cd07867 158 FARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred ceeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccc
Confidence 99876432211 1123356788999999873 35899999999999999999999999643
No 259
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=3.7e-35 Score=301.84 Aligned_cols=253 Identities=26% Similarity=0.364 Sum_probs=200.2
Q ss_pred cCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEe
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYD 518 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 518 (720)
++|...+.||+|+||.||+|.. .+++.+|+|.+.... ....+.+.+|++++++++||||+++++++.+.+..+++||
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e 80 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEP--GDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVME 80 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCc--hhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEe
Confidence 5688889999999999999965 468899999987442 2245788999999999999999999999999999999999
Q ss_pred eCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCC
Q 004994 519 YGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSG 598 (720)
Q Consensus 519 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~ 598 (720)
|+++++|.+++... ...+++.....++.+++.||.|||+. +++|+||||+||++++++.+||+|||++......
T Consensus 81 ~~~~~~l~~~~~~~---~~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~ 154 (262)
T cd06613 81 YCGGGSLQDIYQVT---RGPLSELQIAYVCRETLKGLAYLHET---GKIHRDIKGANILLTEDGDVKLADFGVSAQLTAT 154 (262)
T ss_pred CCCCCcHHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHHhC---CceecCCChhhEEECCCCCEEECccccchhhhhh
Confidence 99999999988532 24688899999999999999999987 8999999999999999999999999999765432
Q ss_pred CCcccccCccccccCCCCccCC-C---CCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhh
Q 004994 599 STNELSEGLLTAHGSGAPEFES-G---SYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRM 674 (720)
Q Consensus 599 ~~~~~~~~~~~~~~~~aPE~~~-~---~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (720)
. .......++..|+|||... . .++.++|||||||++|||+||+.||............. ....
T Consensus 155 ~--~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~-----------~~~~ 221 (262)
T cd06613 155 I--AKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLIS-----------KSNF 221 (262)
T ss_pred h--hccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH-----------hccC
Confidence 1 1122345677899999873 3 68899999999999999999999997543221110000 0000
Q ss_pred cCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 675 VDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 675 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
..+.. ......+.++.+++.+||+.+|.+|||+++|+.+
T Consensus 222 ~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 260 (262)
T cd06613 222 PPPKL--KDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQH 260 (262)
T ss_pred CCccc--cchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00111 1123345678999999999999999999999864
No 260
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=3.7e-35 Score=307.15 Aligned_cols=251 Identities=21% Similarity=0.340 Sum_probs=196.4
Q ss_pred cCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEe
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYD 518 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 518 (720)
+.|+..+.||+|+||.||+|.. .+++.||+|.+... .....+.+.+|+++++.++|+||+++++++...+..++|||
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 89 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETK--SEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIE 89 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEe
Confidence 5677889999999999999966 45899999998643 23445678899999999999999999999998899999999
Q ss_pred eCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCC
Q 004994 519 YGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSG 598 (720)
Q Consensus 519 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~ 598 (720)
|+++++|..++... ...+++..+..++.|+++||+|||+. +++||||||+||+++.++.+||+|||++......
T Consensus 90 ~~~~~~l~~~~~~~---~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~ 163 (292)
T cd06644 90 FCPGGAVDAIMLEL---DRGLTEPQIQVICRQMLEALQYLHSM---KIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKT 163 (292)
T ss_pred cCCCCcHHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHhcC---CeeecCCCcceEEEcCCCCEEEccCccceecccc
Confidence 99999998877432 34588999999999999999999986 9999999999999999999999999998754221
Q ss_pred CCcccccCccccccCCCCccCC------CCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhh
Q 004994 599 STNELSEGLLTAHGSGAPEFES------GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALS 672 (720)
Q Consensus 599 ~~~~~~~~~~~~~~~~aPE~~~------~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (720)
........++..|+|||++. ..++.++|||||||++|||++|+.||........ .....
T Consensus 164 --~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~--~~~~~----------- 228 (292)
T cd06644 164 --LQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRV--LLKIA----------- 228 (292)
T ss_pred --ccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHH--HHHHh-----------
Confidence 11122345678899999873 2367899999999999999999999965322110 00000
Q ss_pred hhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 673 RMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 673 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
....+.. ..+.....++.+++.+||+.+|++||+++|++++
T Consensus 229 ~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 269 (292)
T cd06644 229 KSEPPTL--SQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEH 269 (292)
T ss_pred cCCCccC--CCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 0000000 0111233567899999999999999999999864
No 261
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=4.3e-35 Score=304.22 Aligned_cols=248 Identities=22% Similarity=0.337 Sum_probs=198.8
Q ss_pred cCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEe
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYD 518 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 518 (720)
..|+..+.||+|+||.||+|.. .++..||+|.+..... ......+.+|++++++++|+||+++++++.+....++|||
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEA-EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIME 82 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEecccc-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEe
Confidence 3466678899999999999965 4688999999864322 2345678899999999999999999999999999999999
Q ss_pred eCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCC
Q 004994 519 YGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSG 598 (720)
Q Consensus 519 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~ 598 (720)
|+++++|.+++.. ..+++.....++.+++.||.|||+. +++|+||+|+||+++.++.++|+|||++..+...
T Consensus 83 ~~~~~~L~~~i~~-----~~l~~~~~~~~~~~l~~~l~~lh~~---~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~ 154 (277)
T cd06640 83 YLGGGSALDLLRA-----GPFDEFQIATMLKEILKGLDYLHSE---KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDT 154 (277)
T ss_pred cCCCCcHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CccCcCCChhhEEEcCCCCEEEcccccceeccCC
Confidence 9999999998853 3477888899999999999999987 9999999999999999999999999999766432
Q ss_pred CCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcCC
Q 004994 599 STNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDP 677 (720)
Q Consensus 599 ~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (720)
. .......++..|.|||.. ...++.++|||||||++|||+||+.||....+...... +..
T Consensus 155 ~--~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~-----------------~~~ 215 (277)
T cd06640 155 Q--IKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFL-----------------IPK 215 (277)
T ss_pred c--cccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhh-----------------hhc
Confidence 2 112224567789999988 55689999999999999999999999965432211100 000
Q ss_pred CCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 678 SLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 678 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
..........+..+.+++.+||+.+|++||++++++++
T Consensus 216 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 216 NNPPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred CCCCCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 11111223455678899999999999999999999876
No 262
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=3.1e-35 Score=306.59 Aligned_cols=267 Identities=19% Similarity=0.306 Sum_probs=200.8
Q ss_pred CCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEee
Q 004994 441 SFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDY 519 (720)
Q Consensus 441 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 519 (720)
+|...+.||+|+||.||+|.. .+|+.||+|++..........+.+.+|++++++++||||+++++++......++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 80 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY 80 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence 467788999999999999965 5789999999976543344557889999999999999999999999999999999999
Q ss_pred CCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCC
Q 004994 520 GGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGS 599 (720)
Q Consensus 520 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~ 599 (720)
+ +++|.+++... ...+++.++..++.++++||+|||+. +++|+||||+||++++++.++|+|||++.......
T Consensus 81 ~-~~~L~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~ 153 (286)
T cd07832 81 M-PSDLSEVLRDE---ERPLPEAQVKSYMRMLLKGVAYMHAN---GIMHRDLKPANLLISADGVLKIADFGLARLFSEEE 153 (286)
T ss_pred c-CCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCHHHEEEcCCCcEEEeeeeecccccCCC
Confidence 9 99999988643 25688999999999999999999987 89999999999999999999999999998764332
Q ss_pred CcccccCccccccCCCCccCC--CCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccch-hhhc-------ccccCchh
Q 004994 600 TNELSEGLLTAHGSGAPEFES--GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSL-VRWA-------IPRLHDID 669 (720)
Q Consensus 600 ~~~~~~~~~~~~~~~aPE~~~--~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~-~~~~-------~~~~~~~~ 669 (720)
. .......++.+|+|||... ..++.++||||+||++|||+||+.||........... .... .+.+.+..
T Consensus 154 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (286)
T cd07832 154 P-RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLP 232 (286)
T ss_pred C-CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcc
Confidence 1 1122345788899999873 3468999999999999999999888864332111100 0000 00000000
Q ss_pred hhhhhcCCCCCc----hhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 670 ALSRMVDPSLDG----AYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 670 ~~~~~~~~~~~~----~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
....+..+.... ....+...++.+++.+||+.+|++|||+++++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h 282 (286)
T cd07832 233 DYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH 282 (286)
T ss_pred hhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 000110000000 0111234678999999999999999999999875
No 263
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=8.2e-36 Score=317.67 Aligned_cols=256 Identities=20% Similarity=0.217 Sum_probs=195.5
Q ss_pred cCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccc-cccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTV-SQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVY 517 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~-~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 517 (720)
++|...+.||+|+||+||+++. .+++.||+|.+.+.. ........+.+|..++..++|+||+.+++++.+.+..++||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 4688889999999999999965 468899999986432 22334456888999999999999999999999999999999
Q ss_pred eeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCC
Q 004994 518 DYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFS 597 (720)
Q Consensus 518 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~ 597 (720)
||+++|+|.+++... ...+++.....++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++.+..
T Consensus 81 Ey~~gg~L~~~l~~~---~~~l~~~~~~~~~~qi~~~L~~lH~~---~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 154 (331)
T cd05624 81 DYYVGGDLLTLLSKF---EDRLPEDMARFYIAEMVLAIHSIHQL---HYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQ 154 (331)
T ss_pred eCCCCCcHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCchHHEEEcCCCCEEEEeccceeeccC
Confidence 999999999999642 34578888899999999999999987 999999999999999999999999999976643
Q ss_pred CCCcccccCccccccCCCCccCC------CCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhh
Q 004994 598 GSTNELSEGLLTAHGSGAPEFES------GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDAL 671 (720)
Q Consensus 598 ~~~~~~~~~~~~~~~~~aPE~~~------~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (720)
... .......++..|+|||++. +.++.++|||||||++|||++|+.||...........+.. ....
T Consensus 155 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~------~~~~- 226 (331)
T cd05624 155 DGT-VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN------HEER- 226 (331)
T ss_pred CCc-eeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHc------CCCc-
Confidence 221 1122345889999999874 4578899999999999999999999965432111100000 0000
Q ss_pred hhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCC--CCCHHHHHHH
Q 004994 672 SRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGF--RPPMSEIVQD 715 (720)
Q Consensus 672 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~--RPt~~evl~~ 715 (720)
..+. ......+.++.+++.+|+..++.+ |+++++++++
T Consensus 227 -----~~~p-~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h 266 (331)
T cd05624 227 -----FQFP-SHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKH 266 (331)
T ss_pred -----ccCC-CccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcC
Confidence 0000 001123467889999999876654 4688888765
No 264
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=2.5e-35 Score=301.87 Aligned_cols=246 Identities=26% Similarity=0.413 Sum_probs=194.7
Q ss_pred cCCCCCCeeccCCCceEEEEEeCCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEee
Q 004994 440 NSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDY 519 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 519 (720)
++|+..+.||+|+||.||++.. +++.||+|.+... ...+.+.+|+.++++++||||+++++++... ..++||||
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~----~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~ 79 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCD----VTAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMEL 79 (254)
T ss_pred HHceeeeeeccCCCCceEeccc-CCCceEEEeecCc----chHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEEC
Confidence 4577889999999999999964 6778999998643 2346788999999999999999999998765 47999999
Q ss_pred CCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCC
Q 004994 520 GGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGS 599 (720)
Q Consensus 520 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~ 599 (720)
+++++|.+++.... ...+++..+..++.++++||.|||+. +++||||||+||+++.++.+||+|||+++......
T Consensus 80 ~~~~~L~~~l~~~~--~~~~~~~~~~~~~~qi~~al~~lH~~---~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~ 154 (254)
T cd05083 80 MSKGNLVNFLRTRG--RALVSVIQLLQFSLDVAEGMEYLESK---KLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGV 154 (254)
T ss_pred CCCCCHHHHHHhcC--cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCcEEECCCccceeccccC
Confidence 99999999986432 34578899999999999999999987 99999999999999999999999999987543211
Q ss_pred CcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcccccCchhhhhhhcCC
Q 004994 600 TNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDP 677 (720)
Q Consensus 600 ~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (720)
........|+|||+. .+.++.++|||||||++|||++ |+.||............. .
T Consensus 155 -----~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~-------------~---- 212 (254)
T cd05083 155 -----DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVE-------------K---- 212 (254)
T ss_pred -----CCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHh-------------C----
Confidence 112334679999988 5678999999999999999997 999996543211110000 0
Q ss_pred CCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q 004994 678 SLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLC 718 (720)
Q Consensus 678 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 718 (720)
..........+..+.+++.+||+.+|++||+++++++.|++
T Consensus 213 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 213 GYRMEPPEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred CCCCCCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 00000112234678899999999999999999999999874
No 265
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=3.3e-35 Score=301.65 Aligned_cols=237 Identities=28% Similarity=0.469 Sum_probs=185.3
Q ss_pred CeeccCCCceEEEEEeCC-C----------cEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEE
Q 004994 446 NFIGEGLLGSVYKAELPG-G----------KLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHL 514 (720)
Q Consensus 446 ~~lg~G~~g~Vy~~~~~~-g----------~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~ 514 (720)
+.||+|+||.||+|...+ + ..|++|.+.... .....|.+|+.++++++||||+++++++.. +..+
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~ 76 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDH---RDSLAFFETASLMSQLSHKHLVKLYGVCVR-DENI 76 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccch---hhHHHHHHHHHHHHcCCCcchhheeeEEec-CCcE
Confidence 468999999999997653 3 257888775432 116788999999999999999999999988 7789
Q ss_pred EEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCC-------CeEEc
Q 004994 515 LVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKL-------IVRVS 587 (720)
Q Consensus 515 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~-------~~kl~ 587 (720)
+||||+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++ .+||+
T Consensus 77 lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dlkp~Nill~~~~~~~~~~~~~kl~ 150 (259)
T cd05037 77 MVEEYVKFGPLDVFLHRE---KNNVSLHWKLDVAKQLASALHYLEDK---KLVHGNVCGKNILVARYGLNEGYVPFIKLS 150 (259)
T ss_pred EEEEcCCCCcHHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHhhC---CeecccCccceEEEecCccccCCceeEEeC
Confidence 999999999999998643 22688899999999999999999986 999999999999999888 79999
Q ss_pred cccCCCCCCCCCCcccccCccccccCCCCccCCC---CCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhccc
Q 004994 588 DCGLAPLLFSGSTNELSEGLLTAHGSGAPEFESG---SYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIP 663 (720)
Q Consensus 588 DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~---~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~ 663 (720)
|||++..... .....+...|+|||++.+ .++.++|||||||++|||++ |..||.............
T Consensus 151 Dfg~a~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~~---- 220 (259)
T cd05037 151 DPGIPITVLS------REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFYQ---- 220 (259)
T ss_pred CCCccccccc------ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHHh----
Confidence 9999986533 112345567999999843 58899999999999999999 577876543211110000
Q ss_pred ccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 004994 664 RLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLL 717 (720)
Q Consensus 664 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 717 (720)
.. .....+ ....+.+++.+||..+|++|||+.|+++.|+
T Consensus 221 ---~~---~~~~~~---------~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 221 ---DQ---HRLPMP---------DCAELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred ---cC---CCCCCC---------CchHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 00 000000 0156889999999999999999999999874
No 266
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=3.4e-35 Score=303.74 Aligned_cols=254 Identities=24% Similarity=0.346 Sum_probs=197.1
Q ss_pred cCCCCCCeeccCCCceEEEEEeCC----CcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAELPG----GKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLL 515 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~~~----g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~l 515 (720)
++|...+.||+|+||.||+|...+ ...||||....... ....+.+.+|+.++++++||||+++++++.+ +..++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~l 83 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTS-PSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWI 83 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCC-HHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEE
Confidence 356778899999999999996533 34689998864432 3345688999999999999999999999876 45789
Q ss_pred EEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCC
Q 004994 516 VYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLL 595 (720)
Q Consensus 516 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~ 595 (720)
||||+++++|.+++... ...+++..+..++.+++.||.|||+. +++||||||+||+++.++.+||+|||+++..
T Consensus 84 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~ 157 (270)
T cd05056 84 VMELAPLGELRSYLQVN---KYSLDLASLILYSYQLSTALAYLESK---RFVHRDIAARNVLVSSPDCVKLGDFGLSRYL 157 (270)
T ss_pred EEEcCCCCcHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccChheEEEecCCCeEEccCceeeec
Confidence 99999999999998542 23589999999999999999999987 8999999999999999999999999999866
Q ss_pred CCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcccccCchhhhhh
Q 004994 596 FSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSR 673 (720)
Q Consensus 596 ~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (720)
...... ......+...|+|||.. ...++.++|||||||++||+++ |+.||............. .
T Consensus 158 ~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~-------------~ 223 (270)
T cd05056 158 EDESYY-KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIE-------------N 223 (270)
T ss_pred ccccce-ecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHH-------------c
Confidence 433211 11122234579999987 4568999999999999999986 999996543221111000 0
Q ss_pred hcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 674 MVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 674 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
..... .+...+.++.+++.+|+..+|++|||+.++++.|+++
T Consensus 224 ~~~~~----~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~ 265 (270)
T cd05056 224 GERLP----MPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDI 265 (270)
T ss_pred CCcCC----CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 00000 1112345788999999999999999999999999875
No 267
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=2.7e-35 Score=306.50 Aligned_cols=259 Identities=24% Similarity=0.368 Sum_probs=199.3
Q ss_pred CHHHHHHHhcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHcc-CCCceeEEEeEec
Q 004994 431 TIASLQQYTNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRL-RHGNIVELIGYCN 508 (720)
Q Consensus 431 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~ 508 (720)
+..++....+.|+..+.||+|+||.||+|.. .+++.||+|++... .....++..|+.+++++ +|+||+++++++.
T Consensus 7 ~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~---~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~ 83 (282)
T cd06636 7 DLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVT---EDEEEEIKLEINMLKKYSHHRNIATYYGAFI 83 (282)
T ss_pred hhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecC---hHHHHHHHHHHHHHHHhcCCCcEEEEeeehh
Confidence 4455555677889999999999999999965 56899999998543 23345678888999888 7999999999985
Q ss_pred c------CCeEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCC
Q 004994 509 E------HGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKL 582 (720)
Q Consensus 509 ~------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~ 582 (720)
. .+..+++|||+++|+|.+++.... ...+++.....++.|+++||.|||+. +|+||||||+||++++++
T Consensus 84 ~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dl~~~nili~~~~ 158 (282)
T cd06636 84 KKSPPGHDDQLWLVMEFCGAGSVTDLVKNTK--GNALKEDWIAYICREILRGLAHLHAH---KVIHRDIKGQNVLLTENA 158 (282)
T ss_pred cccccCCCCEEEEEEEeCCCCcHHHHHHHcc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCC
Confidence 2 457899999999999999886422 23577888889999999999999987 899999999999999999
Q ss_pred CeEEccccCCCCCCCCCCcccccCccccccCCCCccCC------CCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccc
Q 004994 583 IVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFES------GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQS 656 (720)
Q Consensus 583 ~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~------~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~ 656 (720)
.++|+|||++....... .......++..|+|||.+. ..++.++|||||||++|||++|+.||....+.....
T Consensus 159 ~~~l~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~ 236 (282)
T cd06636 159 EVKLVDFGVSAQLDRTV--GRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALF 236 (282)
T ss_pred CEEEeeCcchhhhhccc--cCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhh
Confidence 99999999987653211 1122345778899999863 347889999999999999999999996533211111
Q ss_pred hhhhcccccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 657 LVRWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 657 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.. .+...+... ....+.++.+++.+||+.||.+|||+.|++++
T Consensus 237 ~~-------------~~~~~~~~~---~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~ 279 (282)
T cd06636 237 LI-------------PRNPPPKLK---SKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKH 279 (282)
T ss_pred hH-------------hhCCCCCCc---ccccCHHHHHHHHHHhCCChhhCcCHHHHhcC
Confidence 00 000111111 11234578899999999999999999999864
No 268
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=8e-35 Score=300.12 Aligned_cols=252 Identities=20% Similarity=0.287 Sum_probs=193.4
Q ss_pred cCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccc---cccHHHHHHHHHHHHccCCCceeEEEeEeccC--CeE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQ---RQTDEEFLELASTISRLRHGNIVELIGYCNEH--GQH 513 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~---~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~--~~~ 513 (720)
++|+..+.||+|+||.||+|.. .+|+.||||.+...... ....+.+.+|++++++++||||+++++++.+. ...
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 4688889999999999999965 56899999998633211 22345788899999999999999999988763 467
Q ss_pred EEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCC
Q 004994 514 LLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAP 593 (720)
Q Consensus 514 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~ 593 (720)
+++|||+++++|.+++.. ...+++....+++.+++.||+|||+. +++|+||||+||+++.++.+||+|||+++
T Consensus 82 ~~v~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~Dfg~~~ 154 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKS----YGALTENVTRKYTRQILEGVSYLHSN---MIVHRDIKGANILRDSVGNVKLGDFGASK 154 (265)
T ss_pred EEEEEecCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEecCCCCEEECcCcccc
Confidence 899999999999998853 23477888899999999999999987 89999999999999999999999999997
Q ss_pred CCCCCCCc-ccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhh
Q 004994 594 LLFSGSTN-ELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDAL 671 (720)
Q Consensus 594 ~~~~~~~~-~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (720)
........ .......++..|+|||.. ...++.++|||||||++|||++|+.||........ +
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~--~-------------- 218 (265)
T cd06652 155 RLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAA--I-------------- 218 (265)
T ss_pred ccccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHH--H--------------
Confidence 65321111 111224577889999988 44688999999999999999999999964321110 0
Q ss_pred hhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 672 SRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 672 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.+..........+......+.+++.+|+. +|++||+++|++++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~ 261 (265)
T cd06652 219 FKIATQPTNPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRH 261 (265)
T ss_pred HHHhcCCCCCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcC
Confidence 00000000111223344567899999995 99999999999875
No 269
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=1.2e-35 Score=305.07 Aligned_cols=239 Identities=26% Similarity=0.438 Sum_probs=185.6
Q ss_pred CeeccCCCceEEEEEeC-CC-------cEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEE
Q 004994 446 NFIGEGLLGSVYKAELP-GG-------KLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVY 517 (720)
Q Consensus 446 ~~lg~G~~g~Vy~~~~~-~g-------~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 517 (720)
+.||+|+||.||+|... .+ ..||+|.+... .....+.+.+|+.+++.++||||+++++++...+..++||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 78 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKS--HRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQ 78 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcch--hHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEE
Confidence 36999999999999653 22 34888887533 2344567889999999999999999999999988999999
Q ss_pred eeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCC--------eEEccc
Q 004994 518 DYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLI--------VRVSDC 589 (720)
Q Consensus 518 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~--------~kl~DF 589 (720)
||+++|+|.++++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +|++||
T Consensus 79 e~~~~g~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~ 152 (258)
T cd05078 79 EYVKFGSLDTYLKKN---KNLINISWKLEVAKQLAWALHFLEDK---GLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDP 152 (258)
T ss_pred ecCCCCcHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEEecccccccCCCceEEeccc
Confidence 999999999998643 23678899999999999999999987 9999999999999987765 699999
Q ss_pred cCCCCCCCCCCcccccCccccccCCCCccCCC--CCCCccchHhHHHHHHHHHhC-CCCCCCCCCccccchhhhcccccC
Q 004994 590 GLAPLLFSGSTNELSEGLLTAHGSGAPEFESG--SYSCQSDVYSLGVVMLELLTG-RKPYDRSRPRGEQSLVRWAIPRLH 666 (720)
Q Consensus 590 Gla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~--~~~~~~Dv~S~Gvvl~elltG-~~Pf~~~~~~~~~~~~~~~~~~~~ 666 (720)
|++...... ....++..|+|||...+ .++.++|||||||++|||++| ..||.............
T Consensus 153 g~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~~~~------- 219 (258)
T cd05078 153 GISITVLPK------EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQFYE------- 219 (258)
T ss_pred ccccccCCc------hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHHHHH-------
Confidence 998755322 12346778999999843 579999999999999999998 46664432211110000
Q ss_pred chhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 004994 667 DIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLL 717 (720)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 717 (720)
. ...+ +.....++.+++.+||+.||++|||++++++.|+
T Consensus 220 ------~--~~~~----~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 220 ------D--RHQL----PAPKWTELANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred ------c--cccC----CCCCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 0 0001 1112246789999999999999999999999873
No 270
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=3.8e-35 Score=306.32 Aligned_cols=257 Identities=25% Similarity=0.357 Sum_probs=198.0
Q ss_pred CCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEecc--CCeEEEEE
Q 004994 441 SFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNE--HGQHLLVY 517 (720)
Q Consensus 441 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~--~~~~~lv~ 517 (720)
+|...+.||.|++|.||+|.. .+++.||+|.+..... ......+.+|++++++++||||++++++|.+ .+..++||
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 80 (287)
T cd06621 2 KIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPN-PDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM 80 (287)
T ss_pred ceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCc-hHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence 567778999999999999966 4689999999875422 2345678999999999999999999998854 34789999
Q ss_pred eeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCC
Q 004994 518 DYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFS 597 (720)
Q Consensus 518 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~ 597 (720)
||+++++|.+++.........+++.....++.++++||.|||+. +++|+||+|+||+++.++.++|+|||++.....
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~ 157 (287)
T cd06621 81 EYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSR---KIIHRDIKPSNILLTRKGQVKLCDFGVSGELVN 157 (287)
T ss_pred EecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecCCeEEEeeccccccccc
Confidence 99999999998754333345678889999999999999999987 999999999999999999999999999876532
Q ss_pred CCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCc--cccchhhhcccccCchhhhhhh
Q 004994 598 GSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPR--GEQSLVRWAIPRLHDIDALSRM 674 (720)
Q Consensus 598 ~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 674 (720)
.. .....++..|+|||.. .+.++.++|||||||++|||++|+.||...... .......+.. ..
T Consensus 158 ~~----~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~----------~~ 223 (287)
T cd06621 158 SL----AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIV----------NM 223 (287)
T ss_pred cc----cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHh----------cC
Confidence 21 1224467789999988 557899999999999999999999999754220 1111111110 00
Q ss_pred cCCCCCch--hhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 675 VDPSLDGA--YLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 675 ~~~~~~~~--~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
..+.+... .....++.+.+++.+||+.+|++|||+.|++++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~ 266 (287)
T cd06621 224 PNPELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEH 266 (287)
T ss_pred CchhhccCCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhC
Confidence 00011000 001234678899999999999999999999874
No 271
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=4.2e-35 Score=300.59 Aligned_cols=249 Identities=25% Similarity=0.415 Sum_probs=196.6
Q ss_pred CCCCCCeeccCCCceEEEEEeC-CCcEEEEEEeccccc---ccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEE
Q 004994 441 SFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVS---QRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLV 516 (720)
Q Consensus 441 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~---~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 516 (720)
+|...+.||+|++|+||+|... +++.|++|.+..... .....+.+.+|++++++++|+||+++++++.+.+..+++
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 3667789999999999999765 789999999864321 123446789999999999999999999999999999999
Q ss_pred EeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCC
Q 004994 517 YDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLF 596 (720)
Q Consensus 517 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~ 596 (720)
|||+++++|.+++.. ...+++.....++.++++||+|||+. +++|+||+|+||+++.++.+||+|||++....
T Consensus 81 ~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~ 153 (258)
T cd06632 81 LELVPGGSLAKLLKK----YGSFPEPVIRLYTRQILLGLEYLHDR---NTVHRDIKGANILVDTNGVVKLADFGMAKQVV 153 (258)
T ss_pred EEecCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccceecc
Confidence 999999999999853 24578899999999999999999987 89999999999999999999999999987653
Q ss_pred CCCCcccccCccccccCCCCccCC-CC-CCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhh
Q 004994 597 SGSTNELSEGLLTAHGSGAPEFES-GS-YSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRM 674 (720)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~aPE~~~-~~-~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (720)
... ......++..|++||... .. ++.++|+|||||++|||++|+.||........ ...+. ....
T Consensus 154 ~~~---~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~--~~~~~--~~~~------- 219 (258)
T cd06632 154 EFS---FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAA--VFKIG--RSKE------- 219 (258)
T ss_pred ccc---cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHH--HHHHH--hccc-------
Confidence 322 122345678899999873 34 88999999999999999999999965431110 00000 0000
Q ss_pred cCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 675 VDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 675 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.+ ..+......+.+++.+||+.+|++||++++++++
T Consensus 220 -~~----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 255 (258)
T cd06632 220 -LP----PIPDHLSDEAKDFILKCLQRDPSLRPTAAELLEH 255 (258)
T ss_pred -CC----CcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhcC
Confidence 00 0111233567899999999999999999999864
No 272
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=5.2e-36 Score=319.31 Aligned_cols=242 Identities=21% Similarity=0.247 Sum_probs=184.2
Q ss_pred eccCCCceEEEEEe-CCCcEEEEEEeccccc-ccccHHHHHHHHHHHHcc---CCCceeEEEeEeccCCeEEEEEeeCCC
Q 004994 448 IGEGLLGSVYKAEL-PGGKLLAVKKLSNTVS-QRQTDEEFLELASTISRL---RHGNIVELIGYCNEHGQHLLVYDYGGN 522 (720)
Q Consensus 448 lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~~~e~~~l~~l---~H~niv~l~~~~~~~~~~~lv~e~~~~ 522 (720)
||+|+||+||+|.. .+++.||||++.+... .......+..|..++... +||||+++++++.+....++||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 69999999999965 5689999999864321 122233455566666655 699999999999999999999999999
Q ss_pred CCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCCCcc
Q 004994 523 CTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNE 602 (720)
Q Consensus 523 gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~~ 602 (720)
|+|.+++.. ...+++.....++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++...... .
T Consensus 81 g~L~~~l~~----~~~~~~~~~~~~~~qil~al~~LH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~--~ 151 (330)
T cd05586 81 GELFWHLQK----EGRFSEDRAKFYIAELVLALEHLHKY---DIVYRDLKPENILLDATGHIALCDFGLSKANLTDN--K 151 (330)
T ss_pred ChHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCC--C
Confidence 999988853 34688899999999999999999987 99999999999999999999999999997543221 1
Q ss_pred cccCccccccCCCCccCCC--CCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcCCCCC
Q 004994 603 LSEGLLTAHGSGAPEFESG--SYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLD 680 (720)
Q Consensus 603 ~~~~~~~~~~~~aPE~~~~--~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (720)
......++..|+|||.+.+ .++.++|||||||++|||+||+.||...........+... ...+.
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~--------------~~~~~ 217 (330)
T cd05586 152 TTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFG--------------KVRFP 217 (330)
T ss_pred CccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcC--------------CCCCC
Confidence 2234568899999998733 4799999999999999999999999653321111000000 00010
Q ss_pred chhhHHHHHHHHHHHHHHhccCCCCCC----CHHHHHHH
Q 004994 681 GAYLAKSLSRFADIISRCVQWEPGFRP----PMSEIVQD 715 (720)
Q Consensus 681 ~~~~~~~~~~l~~l~~~cl~~dP~~RP----t~~evl~~ 715 (720)
. .....++.+++.+||+.||.+|| +++|++++
T Consensus 218 ~---~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h 253 (330)
T cd05586 218 K---NVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEH 253 (330)
T ss_pred C---ccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcC
Confidence 0 01235678999999999999998 56776653
No 273
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=3.1e-35 Score=306.77 Aligned_cols=253 Identities=23% Similarity=0.350 Sum_probs=197.8
Q ss_pred CCCCCCeeccCCCceEEEEEeC-CCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEee
Q 004994 441 SFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDY 519 (720)
Q Consensus 441 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 519 (720)
+|+..+.||+|+||.||++... +|+.||+|.+.... .......+.+|++++++++|+||+++++++...+..++||||
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (286)
T cd06622 2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLEL-DESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEY 80 (286)
T ss_pred hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeeccc-CHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEee
Confidence 5777899999999999999764 78999999986432 223346788999999999999999999999999999999999
Q ss_pred CCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCC
Q 004994 520 GGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGS 599 (720)
Q Consensus 520 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~ 599 (720)
+++++|.+++.... ....+++.....++.++++||.|||+. .+|+||||||+||+++.++.+||+|||++..+....
T Consensus 81 ~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~LH~~--~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 157 (286)
T cd06622 81 MDAGSLDKLYAGGV-ATEGIPEDVLRRITYAVVKGLKFLKEE--HNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASL 157 (286)
T ss_pred cCCCCHHHHHHhcc-ccCCCCHHHHHHHHHHHHHHHHHHHhc--CCEeeCCCCHHHEEECCCCCEEEeecCCcccccCCc
Confidence 99999998886421 234689999999999999999999964 289999999999999999999999999997653221
Q ss_pred CcccccCccccccCCCCccCCC-------CCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhh
Q 004994 600 TNELSEGLLTAHGSGAPEFESG-------SYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALS 672 (720)
Q Consensus 600 ~~~~~~~~~~~~~~~aPE~~~~-------~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (720)
.....++..|+|||...+ .++.++|||||||++|||++|+.||.......... .+.
T Consensus 158 ----~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~-------------~~~ 220 (286)
T cd06622 158 ----AKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFA-------------QLS 220 (286)
T ss_pred ----cccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHH-------------HHH
Confidence 122346778999998732 25789999999999999999999996532211111 111
Q ss_pred hhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 673 RMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 673 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.+.+... ...+.....++.+++.+||+.+|++||++++++++
T Consensus 221 ~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 262 (286)
T cd06622 221 AIVDGDP-PTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEH 262 (286)
T ss_pred HHhhcCC-CCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcC
Confidence 1111100 01122345678899999999999999999999875
No 274
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=3.2e-35 Score=304.35 Aligned_cols=255 Identities=29% Similarity=0.395 Sum_probs=198.8
Q ss_pred HhcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHcc-CCCceeEEEeEeccC-----
Q 004994 438 YTNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRL-RHGNIVELIGYCNEH----- 510 (720)
Q Consensus 438 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~----- 510 (720)
.+++|+..+.||+|++|.||+|.. .+++.|++|++.... ...+.+.+|+++++++ +|+||+++++++.+.
T Consensus 4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~ 80 (275)
T cd06608 4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIE---DEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGN 80 (275)
T ss_pred chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCc---hhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCc
Confidence 457899999999999999999976 468899999986442 2346789999999999 799999999999653
Q ss_pred -CeEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccc
Q 004994 511 -GQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDC 589 (720)
Q Consensus 511 -~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DF 589 (720)
+..++||||+++++|.+++.........+++..+..++.|+++||.|||+. +++|+||+|+||++++++.+||+||
T Consensus 81 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~~l~p~ni~~~~~~~~~l~d~ 157 (275)
T cd06608 81 DDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHEN---KVIHRDIKGQNILLTKNAEVKLVDF 157 (275)
T ss_pred ceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEEccCCeEEECCC
Confidence 358999999999999999865333345788999999999999999999987 8999999999999999999999999
Q ss_pred cCCCCCCCCCCcccccCccccccCCCCccCC------CCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhccc
Q 004994 590 GLAPLLFSGSTNELSEGLLTAHGSGAPEFES------GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIP 663 (720)
Q Consensus 590 Gla~~~~~~~~~~~~~~~~~~~~~~aPE~~~------~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~ 663 (720)
|++....... .......++..|+|||... ..++.++|||||||++|||+||+.||......... ...
T Consensus 158 ~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~--~~~--- 230 (275)
T cd06608 158 GVSAQLDSTL--GRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRAL--FKI--- 230 (275)
T ss_pred ccceecccch--hhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHH--HHh---
Confidence 9987653321 1122345778899999863 23678999999999999999999999643221110 000
Q ss_pred ccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 664 RLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 664 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.....+.. ........++.+++.+||..||++|||++|++++
T Consensus 231 --------~~~~~~~~--~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~ 272 (275)
T cd06608 231 --------PRNPPPTL--KSPENWSKKFNDFISECLIKNYEQRPFMEELLEH 272 (275)
T ss_pred --------hccCCCCC--CchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 00000111 1112245678899999999999999999999874
No 275
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=1.7e-35 Score=308.28 Aligned_cols=267 Identities=19% Similarity=0.264 Sum_probs=196.5
Q ss_pred CCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEee
Q 004994 441 SFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDY 519 (720)
Q Consensus 441 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 519 (720)
+|+..+.||+|++|.||+|.. .+|+.||||++............+..|++++++++||||+++++++.+.+..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 80 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence 477789999999999999965 4689999999875443334446788999999999999999999999999999999999
Q ss_pred CCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCC
Q 004994 520 GGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGS 599 (720)
Q Consensus 520 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~ 599 (720)
+. ++|.+++.... ...+++.....++.++++||+|||.. +++||||+|+||++++++.+||+|||+++.+....
T Consensus 81 ~~-~~l~~~~~~~~--~~~l~~~~~~~~~~~i~~~l~~lh~~---~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~ 154 (284)
T cd07860 81 LH-QDLKKFMDASP--LSGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 154 (284)
T ss_pred cc-cCHHHHHHhCC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEeeccchhhcccCc
Confidence 96 58888875432 35688999999999999999999987 89999999999999999999999999987653321
Q ss_pred CcccccCccccccCCCCccCC--CCCCCccchHhHHHHHHHHHhCCCCCCCCCCcccc-chhhhcccc-------cCchh
Q 004994 600 TNELSEGLLTAHGSGAPEFES--GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQ-SLVRWAIPR-------LHDID 669 (720)
Q Consensus 600 ~~~~~~~~~~~~~~~aPE~~~--~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~-~~~~~~~~~-------~~~~~ 669 (720)
. ......++..|+|||... ..++.++|||||||++|||+||+.||......... ...++.... .....
T Consensus 155 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (284)
T cd07860 155 R--TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLP 232 (284)
T ss_pred c--ccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHH
Confidence 1 112233567899999873 33688999999999999999999999654321110 011100000 00000
Q ss_pred hhhhhcCCCCCc---hhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 670 ALSRMVDPSLDG---AYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 670 ~~~~~~~~~~~~---~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.....+...... ........++.+++.+||+.||++|||++|++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 281 (284)
T cd07860 233 DYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAH 281 (284)
T ss_pred HHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcC
Confidence 000000000000 0011123567899999999999999999999864
No 276
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=6.4e-35 Score=301.19 Aligned_cols=255 Identities=25% Similarity=0.432 Sum_probs=198.9
Q ss_pred CCCCCCeeccCCCceEEEEE-eCCCcEEEEEEecccccc----cccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEE
Q 004994 441 SFSEGNFIGEGLLGSVYKAE-LPGGKLLAVKKLSNTVSQ----RQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLL 515 (720)
Q Consensus 441 ~~~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~----~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~l 515 (720)
+|+..+.||+|++|.||++. ..+++.||+|++...... ....+.+..|++++++++|+||+++++++.+.+..++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 47778999999999999995 467899999998643211 1234678999999999999999999999999999999
Q ss_pred EEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCC-CeEEccccCCCC
Q 004994 516 VYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKL-IVRVSDCGLAPL 594 (720)
Q Consensus 516 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~-~~kl~DFGla~~ 594 (720)
||||+++++|.+++.. ...+++.....++.+++.||.|||+. +++||||||+||+++.++ .+||+|||.+..
T Consensus 81 v~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~ql~~al~~LH~~---~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~ 153 (268)
T cd06630 81 FVEWMAGGSVSHLLSK----YGAFKEAVIINYTEQLLRGLSYLHEN---QIIHRDVKGANLLIDSTGQRLRIADFGAAAR 153 (268)
T ss_pred EEeccCCCcHHHHHHH----hCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEcccccccc
Confidence 9999999999999853 34678899999999999999999987 999999999999998776 599999999977
Q ss_pred CCCCCCc--ccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhh
Q 004994 595 LFSGSTN--ELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDAL 671 (720)
Q Consensus 595 ~~~~~~~--~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (720)
+...... .......++..|+|||.. ...++.++||||+|+++|||++|+.||.............
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~------------ 221 (268)
T cd06630 154 LAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIF------------ 221 (268)
T ss_pred cccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHH------------
Confidence 6432111 112234567889999988 4568899999999999999999999996433211111110
Q ss_pred hhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 672 SRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 672 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
+..........+.....++.+++.+|++.+|++|||+.|++++
T Consensus 222 -~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~ 264 (268)
T cd06630 222 -KIASATTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKH 264 (268)
T ss_pred -HHhccCCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcC
Confidence 0000001111222344678899999999999999999999864
No 277
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-35 Score=310.22 Aligned_cols=253 Identities=26% Similarity=0.384 Sum_probs=205.4
Q ss_pred CCCCCCeeccCCCceEEEEEeCC---Cc--EEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEE
Q 004994 441 SFSEGNFIGEGLLGSVYKAELPG---GK--LLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLL 515 (720)
Q Consensus 441 ~~~~~~~lg~G~~g~Vy~~~~~~---g~--~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~l 515 (720)
..+..++||+|-||.||+|.+.+ |+ .||||.-+.+.. ....+.|+.|.-+|++++|||||+++|+|.+. ..++
T Consensus 390 ~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t-~d~tekflqEa~iMrnfdHphIikLIGv~~e~-P~Wi 467 (974)
T KOG4257|consen 390 LITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCT-PDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQ-PMWI 467 (974)
T ss_pred hccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCC-hhhHHHHHHHHHHHHhCCCcchhheeeeeecc-ceeE
Confidence 34456889999999999996532 33 588998876543 44578999999999999999999999999875 5899
Q ss_pred EEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCC
Q 004994 516 VYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLL 595 (720)
Q Consensus 516 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~ 595 (720)
|||.++-|.|.++++.. ...++......++.|+..||+|||+. ++|||||..+|||+.....||++|||+++.+
T Consensus 468 vmEL~~~GELr~yLq~n---k~sL~l~tL~ly~~Qi~talaYLeSk---rfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ 541 (974)
T KOG4257|consen 468 VMELAPLGELREYLQQN---KDSLPLRTLTLYCYQICTALAYLESK---RFVHRDIAARNILVSSPQCVKLADFGLSRYL 541 (974)
T ss_pred EEecccchhHHHHHHhc---cccchHHHHHHHHHHHHHHHHHHHhh---chhhhhhhhhheeecCcceeeecccchhhhc
Confidence 99999999999999643 45677788889999999999999998 9999999999999999999999999999998
Q ss_pred CCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcccccCchhhhhh
Q 004994 596 FSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSR 673 (720)
Q Consensus 596 ~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (720)
.+..+..-+ ...-...|||||.+ ..+++.++|||-|||.|||++. |..||..-...+.. ..+...+.
T Consensus 542 ed~~yYkaS-~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI-------~~iEnGeR--- 610 (974)
T KOG4257|consen 542 EDDAYYKAS-RGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVI-------GHIENGER--- 610 (974)
T ss_pred cccchhhcc-ccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceE-------EEecCCCC---
Confidence 765543322 22335679999998 6789999999999999999987 99999764433211 12222111
Q ss_pred hcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 674 MVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 674 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
-..+..|++.+..++.+||..||.+||++.|+...|.++
T Consensus 611 -------lP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv 649 (974)
T KOG4257|consen 611 -------LPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDV 649 (974)
T ss_pred -------CCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHH
Confidence 113445678899999999999999999999999988775
No 278
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=5.3e-35 Score=299.55 Aligned_cols=250 Identities=20% Similarity=0.326 Sum_probs=198.0
Q ss_pred CCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEee
Q 004994 441 SFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDY 519 (720)
Q Consensus 441 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 519 (720)
+|...+.||+|+||.||++.. .+++.+|+|++..........+.+.+|++++++++||||+++++++...+..++||||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY 80 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence 467788999999999999954 5788999999875433344567889999999999999999999999999999999999
Q ss_pred CCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCC-CCeEEccccCCCCCCCC
Q 004994 520 GGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEK-LIVRVSDCGLAPLLFSG 598 (720)
Q Consensus 520 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~-~~~kl~DFGla~~~~~~ 598 (720)
+++++|.+++... ....+++..+.+++.++++||.|||+. +++|+||||+||+++++ +.+||+|||++......
T Consensus 81 ~~~~~L~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~ 155 (256)
T cd08220 81 APGGTLAEYIQKR--CNSLLDEDTILHFFVQILLALHHVHTK---LILHRDLKTQNILLDKHKMVVKIGDFGISKILSSK 155 (256)
T ss_pred CCCCCHHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEccCCCceecCCC
Confidence 9999999998642 234578899999999999999999987 99999999999999865 46899999999876432
Q ss_pred CCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcCC
Q 004994 599 STNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDP 677 (720)
Q Consensus 599 ~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (720)
. ......++..|+|||.. ...++.++||||||+++|+|++|+.||........ ..... .....
T Consensus 156 ~---~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~---~~~~~---------~~~~~- 219 (256)
T cd08220 156 S---KAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPAL---VLKIM---------SGTFA- 219 (256)
T ss_pred c---cccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHH---HHHHH---------hcCCC-
Confidence 2 12234567889999998 44678999999999999999999999965432111 11000 00000
Q ss_pred CCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 678 SLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 678 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
. .+...+..+.+++.+||+.+|++|||+.|++++
T Consensus 220 ~----~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~ 253 (256)
T cd08220 220 P----ISDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQ 253 (256)
T ss_pred C----CCCCcCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 0 111234568899999999999999999999875
No 279
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=3.9e-35 Score=307.92 Aligned_cols=266 Identities=20% Similarity=0.270 Sum_probs=197.1
Q ss_pred CCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccc---cccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEE
Q 004994 441 SFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQ---RQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLV 516 (720)
Q Consensus 441 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~---~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 516 (720)
+|...+.||+|++|.||+|.. .+|+.||||++...... ......+..|++++++++|+||+++++++.+.+..++|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 366778999999999999965 46899999999754332 22345677899999999999999999999999999999
Q ss_pred EeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCC
Q 004994 517 YDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLF 596 (720)
Q Consensus 517 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~ 596 (720)
|||+ +++|.+++.... ..+++..+..++.|+++||+|||+. +|+|+||||+||+++.++.+||+|||+++...
T Consensus 81 ~e~~-~~~L~~~i~~~~---~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~ 153 (298)
T cd07841 81 FEFM-ETDLEKVIKDKS---IVLTPADIKSYMLMTLRGLEYLHSN---WILHRDLKPNNLLIASDGVLKLADFGLARSFG 153 (298)
T ss_pred Eccc-CCCHHHHHhccC---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCChhhEEEcCCCCEEEccceeeeecc
Confidence 9999 889999986432 3689999999999999999999987 89999999999999999999999999998764
Q ss_pred CCCCcccccCccccccCCCCccCC--CCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccC-----chh
Q 004994 597 SGSTNELSEGLLTAHGSGAPEFES--GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLH-----DID 669 (720)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~aPE~~~--~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~-----~~~ 669 (720)
.... ......++..|+|||.+. ..++.++|||||||++|||++|..||....+............... ...
T Consensus 154 ~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (298)
T cd07841 154 SPNR--KMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVT 231 (298)
T ss_pred CCCc--cccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhcc
Confidence 3221 112234467899999873 3578999999999999999999888765432211110000000000 000
Q ss_pred hhhhhcCCCC-----CchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 670 ALSRMVDPSL-----DGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 670 ~~~~~~~~~~-----~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.......... ...........+.+++.+||+.||++|||++|++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 232 SLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred cccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 0000000000 000112234678899999999999999999999975
No 280
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=4.6e-35 Score=304.50 Aligned_cols=251 Identities=23% Similarity=0.337 Sum_probs=197.7
Q ss_pred cCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEe
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYD 518 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 518 (720)
++|...+.||+|+||.||+|.. .++..||+|.+... .....+.|..|++++++++|+||+++++++.+.+..++|||
T Consensus 5 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (280)
T cd06611 5 DIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIE--SEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIE 82 (280)
T ss_pred hHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeC--CHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEee
Confidence 4577788999999999999966 46899999998643 23345678899999999999999999999999999999999
Q ss_pred eCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCC
Q 004994 519 YGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSG 598 (720)
Q Consensus 519 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~ 598 (720)
|+++++|.+++... ...+++.....++.+++.||.|||+. +|+|+||||+||+++.++.++|+|||++......
T Consensus 83 ~~~~~~L~~~~~~~---~~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~ 156 (280)
T cd06611 83 FCDGGALDSIMLEL---ERGLTEPQIRYVCRQMLEALNFLHSH---KVIHRDLKAGNILLTLDGDVKLADFGVSAKNKST 156 (280)
T ss_pred ccCCCcHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEECCCCCEEEccCccchhhccc
Confidence 99999999988532 34688999999999999999999987 8999999999999999999999999998765322
Q ss_pred CCcccccCccccccCCCCccCC------CCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhh
Q 004994 599 STNELSEGLLTAHGSGAPEFES------GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALS 672 (720)
Q Consensus 599 ~~~~~~~~~~~~~~~~aPE~~~------~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (720)
. .......++..|++||... ..++.++|||||||++|||++|+.||........ ...+..
T Consensus 157 ~--~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~--~~~~~~---------- 222 (280)
T cd06611 157 L--QKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRV--LLKILK---------- 222 (280)
T ss_pred c--cccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHH--HHHHhc----------
Confidence 1 1122345778899999862 3467899999999999999999999965432111 111000
Q ss_pred hhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 673 RMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 673 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
...+.+. .+...+.++.+++.+||+.+|++||++++++++
T Consensus 223 -~~~~~~~--~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (280)
T cd06611 223 -SEPPTLD--QPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH 262 (280)
T ss_pred -CCCCCcC--CcccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence 0000000 111233567899999999999999999999875
No 281
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3e-36 Score=318.27 Aligned_cols=246 Identities=22% Similarity=0.341 Sum_probs=193.6
Q ss_pred CCeeccCCCceEEEE-EeCCCcEEEEEEeccc--ccccccHHHHHHHHHHHHccCCCceeEEEeEeccCC--eEEEEEee
Q 004994 445 GNFIGEGLLGSVYKA-ELPGGKLLAVKKLSNT--VSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHG--QHLLVYDY 519 (720)
Q Consensus 445 ~~~lg~G~~g~Vy~~-~~~~g~~vavK~l~~~--~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~--~~~lv~e~ 519 (720)
..+||+|+|-+|||| +-.+|..||=-.++-. .......+.|.+|+++|+.|+|||||++|.++.+.. ...+|+|.
T Consensus 45 ~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL 124 (632)
T KOG0584|consen 45 DEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITEL 124 (632)
T ss_pred hhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeec
Confidence 467999999999999 4456777764333311 122334478999999999999999999999997654 47899999
Q ss_pred CCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcC-CCCeEEccccCCCCCCCC
Q 004994 520 GGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDE-KLIVRVSDCGLAPLLFSG 598 (720)
Q Consensus 520 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~-~~~~kl~DFGla~~~~~~ 598 (720)
+..|+|..+... .+.++.....+++.||.+||.|||+. .|+|||||||-+||+++. .|.|||+|.|+|..+...
T Consensus 125 ~TSGtLr~Y~kk----~~~vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s 199 (632)
T KOG0584|consen 125 FTSGTLREYRKK----HRRVNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKS 199 (632)
T ss_pred ccCCcHHHHHHH----hccCCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHHHHhhcc
Confidence 999999999853 45677888999999999999999996 679999999999999975 589999999999887433
Q ss_pred CCcccccCccccccCCCCccCCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcCCC
Q 004994 599 STNELSEGLLTAHGSGAPEFESGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPS 678 (720)
Q Consensus 599 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (720)
.....+||+.|||||+....|++.+||||||+.|+||+|+..||..-.... . ...+++...
T Consensus 200 ----~aksvIGTPEFMAPEmYEE~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~A--Q-------------IYKKV~SGi 260 (632)
T KOG0584|consen 200 ----HAKSVIGTPEFMAPEMYEENYNELVDVYAFGMCMLEMVTSEYPYSECTNPA--Q-------------IYKKVTSGI 260 (632)
T ss_pred ----ccceeccCccccChHHHhhhcchhhhhhhhhHHHHHHHhccCChhhhCCHH--H-------------HHHHHHcCC
Confidence 223478999999999999999999999999999999999999997532211 1 112222221
Q ss_pred CCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 679 LDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 679 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.+..+..-..+++++||.+|+.. .++|||+.|+|++
T Consensus 261 KP~sl~kV~dPevr~fIekCl~~-~~~R~sa~eLL~d 296 (632)
T KOG0584|consen 261 KPAALSKVKDPEVREFIEKCLAT-KSERLSAKELLKD 296 (632)
T ss_pred CHHHhhccCCHHHHHHHHHHhcC-chhccCHHHHhhC
Confidence 11111111125788999999999 9999999999874
No 282
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=7e-36 Score=320.78 Aligned_cols=251 Identities=25% Similarity=0.359 Sum_probs=204.3
Q ss_pred CCCeeccCCCceEEEEEe-CCC----cEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEe
Q 004994 444 EGNFIGEGLLGSVYKAEL-PGG----KLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYD 518 (720)
Q Consensus 444 ~~~~lg~G~~g~Vy~~~~-~~g----~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 518 (720)
..++||+|+||+||||.+ ..| -+||+|++.... ..+..+++++|+-+|.+++|||+++++|+|.... ..||++
T Consensus 700 k~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t-~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq 777 (1177)
T KOG1025|consen 700 KDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFT-SPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQ 777 (1177)
T ss_pred hhceeccccceeEEeeeEecCCceecceeEEEEeeccC-CchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHH
Confidence 458899999999999954 444 368999987543 3455678999999999999999999999998765 889999
Q ss_pred eCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCC
Q 004994 519 YGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSG 598 (720)
Q Consensus 519 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~ 598 (720)
||+.|.|.|+++.. +..+.-+..+.+..|||+||.|||.. ++|||||.++|||+..-.++||.|||+|+.+...
T Consensus 778 ~mP~G~LlDyvr~h---r~~igsq~lLnw~~QIAkgM~YLe~q---rlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d 851 (1177)
T KOG1025|consen 778 LMPLGCLLDYVREH---RDNIGSQDLLNWCYQIAKGMKYLEEQ---RLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPD 851 (1177)
T ss_pred hcccchHHHHHHHh---hccccHHHHHHHHHHHHHHHHHHHhc---chhhhhhhhhheeecCCCeEEEEecchhhccCcc
Confidence 99999999999753 45677788999999999999999987 9999999999999999999999999999999776
Q ss_pred CCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcccccCchhhhhhhcC
Q 004994 599 STNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVD 676 (720)
Q Consensus 599 ~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (720)
+...........+.|+|-|.+ ...|+.++|||||||.+||++| |..||+....++..++ +.
T Consensus 852 ~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dl-----------------le 914 (1177)
T KOG1025|consen 852 EKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDL-----------------LE 914 (1177)
T ss_pred cccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHH-----------------Hh
Confidence 655444444445567777777 5689999999999999999999 9999976443222211 11
Q ss_pred CCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 677 PSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 677 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
...+-..+.-+...+.-++.+||..|+..||+++++...+.+|
T Consensus 915 ~geRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ 957 (1177)
T KOG1025|consen 915 KGERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRM 957 (1177)
T ss_pred ccccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHH
Confidence 1111223445567788999999999999999999999988876
No 283
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=6.2e-35 Score=307.47 Aligned_cols=256 Identities=20% Similarity=0.236 Sum_probs=195.1
Q ss_pred cCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEeccccc-ccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVS-QRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVY 517 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 517 (720)
++|...+.||+|+||.||++.. .+++.||+|.+.+... .....+.+.+|+++++.++||||+++++.+...+..++||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence 3677889999999999999965 4688999999875422 1233467889999999999999999999999999999999
Q ss_pred eeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCC
Q 004994 518 DYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFS 597 (720)
Q Consensus 518 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~ 597 (720)
||+++++|.+++.. ...+++.....++.++++||+|||+. +++||||||+||+++.++.+||+|||+++....
T Consensus 81 e~~~g~~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~ 153 (305)
T cd05609 81 EYVEGGDCATLLKN----IGALPVDMARMYFAETVLALEYLHNY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLM 153 (305)
T ss_pred ecCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHEEECCCCCEEEeeCCCccccCc
Confidence 99999999999853 34588889999999999999999987 899999999999999999999999999874211
Q ss_pred CCC-------------cccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhccc
Q 004994 598 GST-------------NELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIP 663 (720)
Q Consensus 598 ~~~-------------~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~ 663 (720)
... ........++..|+|||+. ...++.++|||||||++|||++|+.||..............
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~~--- 230 (305)
T cd05609 154 SLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVIS--- 230 (305)
T ss_pred CccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh---
Confidence 100 0011123467789999988 55789999999999999999999999964322111000000
Q ss_pred ccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 004994 664 RLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLL 717 (720)
Q Consensus 664 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 717 (720)
.....+... ...+.++.+++.+||+.||++||++.++.+.|+
T Consensus 231 --------~~~~~~~~~----~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~ 272 (305)
T cd05609 231 --------DDIEWPEGD----EALPADAQDLISRLLRQNPLERLGTGGAFEVKQ 272 (305)
T ss_pred --------cccCCCCcc----ccCCHHHHHHHHHHhccChhhccCccCHHHHHh
Confidence 000011110 123456789999999999999999655554443
No 284
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=2.9e-35 Score=303.21 Aligned_cols=253 Identities=24% Similarity=0.389 Sum_probs=198.7
Q ss_pred CCCCCCeeccCCCceEEEEEeC-CCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEee
Q 004994 441 SFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDY 519 (720)
Q Consensus 441 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 519 (720)
+|+..+.||+|++|.||++... +++.||+|++..... ....+++.+|++++++++||||+++++++...+..++++||
T Consensus 2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (265)
T cd06605 2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEIN-EAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEY 80 (265)
T ss_pred cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccC-hHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEe
Confidence 5667788999999999999664 689999999875432 24456788999999999999999999999999999999999
Q ss_pred CCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHh-cCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCC
Q 004994 520 GGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQE-VCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSG 598 (720)
Q Consensus 520 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~-~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~ 598 (720)
+++++|.+++... ...++.....+++.++++||+|||+ . +++|+||||+||++++++.+||+|||.+......
T Consensus 81 ~~~~~L~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~lH~~~---~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~ 154 (265)
T cd06605 81 MDGGSLDKILKEV---QGRIPERILGKIAVAVLKGLTYLHEKH---KIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNS 154 (265)
T ss_pred cCCCcHHHHHHHc---cCCCCHHHHHHHHHHHHHHHHHHcCCC---CeecCCCCHHHEEECCCCCEEEeecccchhhHHH
Confidence 9999999998643 2567888899999999999999998 5 9999999999999999999999999998765322
Q ss_pred CCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcCC
Q 004994 599 STNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDP 677 (720)
Q Consensus 599 ~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (720)
.. ....++..|+|||+. ...++.++||||||+++|||++|+.||........ ... +....+...
T Consensus 155 ~~----~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~-~~~----------~~~~~~~~~ 219 (265)
T cd06605 155 LA----KTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPD-GIF----------ELLQYIVNE 219 (265)
T ss_pred Hh----hcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccc-cHH----------HHHHHHhcC
Confidence 11 115567789999998 45689999999999999999999999965321110 000 011111111
Q ss_pred CCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 678 SLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 678 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
............++.+++.+||..||++|||+.|++++
T Consensus 220 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 257 (265)
T cd06605 220 PPPRLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLEH 257 (265)
T ss_pred CCCCCChhhcCHHHHHHHHHHcCCCchhCcCHHHHhhC
Confidence 11111111145678899999999999999999999864
No 285
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=3.7e-35 Score=307.36 Aligned_cols=267 Identities=23% Similarity=0.306 Sum_probs=197.2
Q ss_pred cCCCCCCeeccCCCceEEEEEeC-CCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccC--CeEEEE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEH--GQHLLV 516 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~--~~~~lv 516 (720)
++|+..+.||+|+||.||+|... +++.+|+|.++...........+.+|++++++++||||+++++++... +..++|
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv 84 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV 84 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence 46778899999999999999664 689999999975433333445677899999999999999999998776 889999
Q ss_pred EeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCC
Q 004994 517 YDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLF 596 (720)
Q Consensus 517 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~ 596 (720)
|||+.+ +|.+++... ...+++.....++.|+++||+|||+. +++||||||+||+++.++.+||+|||+++...
T Consensus 85 ~e~~~~-~L~~~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~ 157 (293)
T cd07843 85 MEYVEH-DLKSLMETM---KQPFLQSEVKCLMLQLLSGVAHLHDN---WILHRDLKTSNLLLNNRGILKICDFGLAREYG 157 (293)
T ss_pred ehhcCc-CHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCcEEEeecCceeecc
Confidence 999985 898888532 23689999999999999999999987 89999999999999999999999999998664
Q ss_pred CCCCcccccCccccccCCCCccCCC--CCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchh-hhcc-c---------
Q 004994 597 SGSTNELSEGLLTAHGSGAPEFESG--SYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLV-RWAI-P--------- 663 (720)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~aPE~~~~--~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~-~~~~-~--------- 663 (720)
... .......++..|+|||...+ .++.++|+||||+++|||++|+.||...........+ .... +
T Consensus 158 ~~~--~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (293)
T cd07843 158 SPL--KPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFS 235 (293)
T ss_pred CCc--cccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhh
Confidence 321 11222446778999998743 4689999999999999999999999754322111100 0000 0
Q ss_pred ccCchh--hhhhhcCCCCCchhhHH-HHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 664 RLHDID--ALSRMVDPSLDGAYLAK-SLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 664 ~~~~~~--~~~~~~~~~~~~~~~~~-~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.+.... .........+...++.. ..+.+.+++.+||+.||++|||+.|++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~ 290 (293)
T cd07843 236 ELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKH 290 (293)
T ss_pred ccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcC
Confidence 000000 00000000001111111 24567899999999999999999999864
No 286
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=1.3e-34 Score=296.88 Aligned_cols=250 Identities=31% Similarity=0.486 Sum_probs=195.8
Q ss_pred CCCCeeccCCCceEEEEEeCC-----CcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEE
Q 004994 443 SEGNFIGEGLLGSVYKAELPG-----GKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVY 517 (720)
Q Consensus 443 ~~~~~lg~G~~g~Vy~~~~~~-----g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 517 (720)
+..+.||+|+||.||++...+ +..||+|.+..... ....+.+..|++++++++|+||+++++++.+.+..+++|
T Consensus 2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~ 80 (258)
T smart00219 2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDAD-EQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVM 80 (258)
T ss_pred cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCC-hHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEE
Confidence 456889999999999996643 38899999965432 225678899999999999999999999999999999999
Q ss_pred eeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCC
Q 004994 518 DYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFS 597 (720)
Q Consensus 518 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~ 597 (720)
||+++++|.+++.... ...+++..+..++.+++.||+|||+. +++||||||+||++++++.++|+|||+++....
T Consensus 81 e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~ql~~~l~~lh~~---~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~ 155 (258)
T smart00219 81 EYMEGGDLLDYLRKNR--PKELSLSDLLSFALQIARGMEYLESK---NFIHRDLAARNCLVGENLVVKISDFGLSRDLYD 155 (258)
T ss_pred eccCCCCHHHHHHhhh--hccCCHHHHHHHHHHHHHHHHHHhcC---CeeecccccceEEEccCCeEEEcccCCceeccc
Confidence 9999999999986422 12289999999999999999999987 999999999999999999999999999987654
Q ss_pred CCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcccccCchhhhhhhc
Q 004994 598 GSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMV 675 (720)
Q Consensus 598 ~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (720)
...... ....++..|+|||.. ...++.++||||+|+++|||++ |+.||....... ..+...
T Consensus 156 ~~~~~~-~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~---~~~~~~------------- 218 (258)
T smart00219 156 DDYYKK-KGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEE---VLEYLK------------- 218 (258)
T ss_pred cccccc-ccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHH---HHHHHh-------------
Confidence 322111 122356789999988 5578999999999999999998 888886432111 111000
Q ss_pred CCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q 004994 676 DPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDL 716 (720)
Q Consensus 676 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L 716 (720)
... ........+.++.+++.+|+..||++|||+.|+++.|
T Consensus 219 ~~~-~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 219 KGY-RLPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred cCC-CCCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 000 0001112346788999999999999999999999864
No 287
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=1.4e-34 Score=305.09 Aligned_cols=247 Identities=26% Similarity=0.357 Sum_probs=194.2
Q ss_pred cCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccc-cccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTV-SQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVY 517 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~-~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 517 (720)
+.|...+.||+|+||.||+|.. .+|+.||+|++.... ......+++.+|++++++++||||++++++|.+.+..++||
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~ 94 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVM 94 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEH
Confidence 4577789999999999999965 468999999986432 22233457889999999999999999999999999999999
Q ss_pred eeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCC
Q 004994 518 DYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFS 597 (720)
Q Consensus 518 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~ 597 (720)
||+. |++.+++... ...+++..+..++.|++.||.|||+. +|+||||+|+||++++++.+||+|||++.....
T Consensus 95 e~~~-g~l~~~~~~~---~~~l~~~~~~~~~~ql~~~L~~LH~~---~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~ 167 (307)
T cd06607 95 EYCL-GSASDILEVH---KKPLQEVEIAAICHGALQGLAYLHSH---ERIHRDIKAGNILLTEPGTVKLADFGSASLVSP 167 (307)
T ss_pred HhhC-CCHHHHHHHc---ccCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEECCCCCEEEeecCcceecCC
Confidence 9997 5777766422 24588999999999999999999987 899999999999999999999999999876532
Q ss_pred CCCcccccCccccccCCCCccC----CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhh
Q 004994 598 GSTNELSEGLLTAHGSGAPEFE----SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSR 673 (720)
Q Consensus 598 ~~~~~~~~~~~~~~~~~aPE~~----~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (720)
. ....++..|+|||.. .+.++.++||||||+++|||+||+.||..............
T Consensus 168 ~------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~------------- 228 (307)
T cd06607 168 A------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQ------------- 228 (307)
T ss_pred C------CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhc-------------
Confidence 2 123567789999986 24588999999999999999999999965332111000000
Q ss_pred hcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 674 MVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 674 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
...+.. .....+..+.+++.+||+.+|++||++.+++++
T Consensus 229 ~~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 267 (307)
T cd06607 229 NDSPTL---SSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKH 267 (307)
T ss_pred CCCCCC---CchhhCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 000111 112244678999999999999999999999875
No 288
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=1.3e-34 Score=298.00 Aligned_cols=254 Identities=27% Similarity=0.391 Sum_probs=199.2
Q ss_pred CCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEee
Q 004994 441 SFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDY 519 (720)
Q Consensus 441 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 519 (720)
+|...+.||+|+||.||+|.. .+++.||+|.++.........+.+.+|++++++++|+||+++++++.+.+..++|+||
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY 80 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence 467788999999999999965 4789999999976544334667899999999999999999999999999999999999
Q ss_pred CCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCC
Q 004994 520 GGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGS 599 (720)
Q Consensus 520 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~ 599 (720)
+++++|.+++.. ...+++..+..++.++++||+|||+. +|+|+||+|+||++++++.+||+|||++.......
T Consensus 81 ~~~~~L~~~~~~----~~~~~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~ 153 (264)
T cd06626 81 CSGGTLEELLEH----GRILDEHVIRVYTLQLLEGLAYLHSH---GIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNT 153 (264)
T ss_pred CCCCcHHHHHhh----cCCCChHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEcccccccccCCCC
Confidence 999999999853 23478888999999999999999987 89999999999999999999999999998764432
Q ss_pred Cccc--ccCccccccCCCCccCCC-C---CCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhh
Q 004994 600 TNEL--SEGLLTAHGSGAPEFESG-S---YSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSR 673 (720)
Q Consensus 600 ~~~~--~~~~~~~~~~~aPE~~~~-~---~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (720)
.... .....++..|++||+..+ . ++.++||||||+++||+++|+.||......... ..... .
T Consensus 154 ~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~--~~~~~----------~ 221 (264)
T cd06626 154 TTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQI--MFHVG----------A 221 (264)
T ss_pred CcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHH--HHHHh----------c
Confidence 2111 113456788999999843 3 788999999999999999999999653211110 00000 0
Q ss_pred hcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 674 MVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 674 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
...+.+.. .......+.+++.+||+.+|++|||++|++.+
T Consensus 222 ~~~~~~~~--~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~ 261 (264)
T cd06626 222 GHKPPIPD--SLQLSPEGKDFLDRCLESDPKKRPTASELLQH 261 (264)
T ss_pred CCCCCCCc--ccccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 00111111 11224567899999999999999999999864
No 289
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=4.5e-35 Score=300.00 Aligned_cols=251 Identities=23% Similarity=0.320 Sum_probs=202.4
Q ss_pred CCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEee
Q 004994 441 SFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDY 519 (720)
Q Consensus 441 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 519 (720)
+|+..+.||+|+||.||++.. .+++.+|+|.+...........++.+|++++++++|+||+++++++.+....++||||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY 80 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence 467778999999999999954 5788999999876543344556788999999999999999999999999999999999
Q ss_pred CCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCC
Q 004994 520 GGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGS 599 (720)
Q Consensus 520 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~ 599 (720)
+++++|.+++.........+++.....++.++++||+|||+. +++|+||+|+||++++++.+||+|||+++.....
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~---~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~- 156 (256)
T cd08530 81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQ---KILHRDLKSANILLVANDLVKIGDLGISKVLKKN- 156 (256)
T ss_pred cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEEecCCcEEEeeccchhhhccC-
Confidence 999999999865444456789999999999999999999987 8999999999999999999999999999876433
Q ss_pred CcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcCCC
Q 004994 600 TNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPS 678 (720)
Q Consensus 600 ~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (720)
......++..|++||.. ...++.++|+||||+++|||++|+.||....... +... +...
T Consensus 157 ---~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~---~~~~--------------~~~~ 216 (256)
T cd08530 157 ---MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQD---LRYK--------------VQRG 216 (256)
T ss_pred ---CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH---HHHH--------------HhcC
Confidence 22234567789999998 4568889999999999999999999996543211 0000 0000
Q ss_pred CCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 679 LDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 679 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
...........++.+++.+|++.+|++||++.|++++
T Consensus 217 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 253 (256)
T cd08530 217 KYPPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILAS 253 (256)
T ss_pred CCCCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 0001112344678999999999999999999999875
No 290
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=8.1e-35 Score=304.40 Aligned_cols=265 Identities=20% Similarity=0.282 Sum_probs=193.4
Q ss_pred cCCCCCCeeccCCCceEEEEEeC-CCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEe
Q 004994 440 NSFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYD 518 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 518 (720)
++|+..+.||+|++|.||+|... +++.||||.+..... ......+.+|++++++++|+||+++++++.+.+..++|||
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 83 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHE-EGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFE 83 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccc-cCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEe
Confidence 56888899999999999999654 689999999875432 2233456789999999999999999999999999999999
Q ss_pred eCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCC
Q 004994 519 YGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSG 598 (720)
Q Consensus 519 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~ 598 (720)
|+++ +|.+++... ...+++.....++.++++||.|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 84 ~~~~-~L~~~~~~~---~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~ 156 (291)
T cd07844 84 YLDT-DLKQYMDDC---GGGLSMHNVRLFLFQLLRGLAYCHQR---RVLHRDLKPQNLLISERGELKLADFGLARAKSVP 156 (291)
T ss_pred cCCC-CHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCHHHEEEcCCCCEEECccccccccCCC
Confidence 9985 899887532 23678889999999999999999987 8999999999999999999999999998754221
Q ss_pred CCcccccCccccccCCCCccCC--CCCCCccchHhHHHHHHHHHhCCCCCCCCCCcccc-chhhhcccccCchhhhhh--
Q 004994 599 STNELSEGLLTAHGSGAPEFES--GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQ-SLVRWAIPRLHDIDALSR-- 673 (720)
Q Consensus 599 ~~~~~~~~~~~~~~~~aPE~~~--~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~-- 673 (720)
.. ......++..|+|||... ..++.++|||||||++|||++|+.||......... ......... ...+....
T Consensus 157 ~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 233 (291)
T cd07844 157 SK--TYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGT-PTEETWPGVS 233 (291)
T ss_pred Cc--cccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCC-CChhhhhhhh
Confidence 11 111223567899999873 35789999999999999999999999654311110 000000000 00000000
Q ss_pred ----hcC---CCCCc----hhhHHH--HHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 674 ----MVD---PSLDG----AYLAKS--LSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 674 ----~~~---~~~~~----~~~~~~--~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
... +.... ...... ...+.+++.+||+.+|++|||+.|++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~ 288 (291)
T cd07844 234 SNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKH 288 (291)
T ss_pred hccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcC
Confidence 000 00000 000001 1567799999999999999999999864
No 291
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=1.5e-34 Score=299.97 Aligned_cols=248 Identities=22% Similarity=0.390 Sum_probs=196.3
Q ss_pred CCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccC---CCceeEEEeEeccCCeEEEE
Q 004994 441 SFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLR---HGNIVELIGYCNEHGQHLLV 516 (720)
Q Consensus 441 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~---H~niv~l~~~~~~~~~~~lv 516 (720)
.|+..+.||+|+||.||+|.. .+++.||+|.+..... ....+++.+|++++++++ |||++++++++.+....++|
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv 80 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTP-DDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWII 80 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCC-chhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEE
Confidence 466778999999999999965 5789999999865422 334567888999999987 99999999999999999999
Q ss_pred EeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCC
Q 004994 517 YDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLF 596 (720)
Q Consensus 517 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~ 596 (720)
|||+++++|.+++.. ..+++.....++.++++||.|||+. +|+||||+|+||++++++.++|+|||++..+.
T Consensus 81 ~e~~~~~~L~~~~~~-----~~l~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~ 152 (277)
T cd06917 81 MEYAEGGSVRTLMKA-----GPIAEKYISVIIREVLVALKYIHKV---GVIHRDIKAANILVTNTGNVKLCDFGVAALLN 152 (277)
T ss_pred EecCCCCcHHHHHHc-----cCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHHEEEcCCCCEEEccCCceeecC
Confidence 999999999998853 2688999999999999999999987 99999999999999999999999999998764
Q ss_pred CCCCcccccCccccccCCCCccCC-C-CCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhh
Q 004994 597 SGSTNELSEGLLTAHGSGAPEFES-G-SYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRM 674 (720)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~aPE~~~-~-~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (720)
.... ......++..|+|||... + .++.++|||||||++|||++|+.||.......... . +. ..
T Consensus 153 ~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~---~----~~------~~ 217 (277)
T cd06917 153 QNSS--KRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMM---L----IP------KS 217 (277)
T ss_pred CCcc--ccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhh---c----cc------cC
Confidence 4321 122345778899999873 3 46899999999999999999999997543211110 0 00 00
Q ss_pred cCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 675 VDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 675 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
..+.+... ..+.++.+++.+||+.||++||++.|++++
T Consensus 218 ~~~~~~~~---~~~~~~~~~i~~~l~~~p~~R~~~~~il~~ 255 (277)
T cd06917 218 KPPRLEDN---GYSKLLREFVAACLDEEPKERLSAEELLKS 255 (277)
T ss_pred CCCCCCcc---cCCHHHHHHHHHHcCCCcccCcCHHHHhhC
Confidence 01111111 133568899999999999999999999864
No 292
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=8.8e-35 Score=307.95 Aligned_cols=255 Identities=25% Similarity=0.285 Sum_probs=199.0
Q ss_pred cCCCCCCeeccCCCceEEEEEeC-CCcEEEEEEecccccc-cccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQ-RQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVY 517 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 517 (720)
++|...+.||+|++|.||+|... +++.||+|.+...... ....+.+.+|+++++.++|+||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence 36778899999999999999654 5899999999754322 234567899999999999999999999999999999999
Q ss_pred eeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCC
Q 004994 518 DYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFS 597 (720)
Q Consensus 518 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~ 597 (720)
||+.+++|.+++... ....+++.....++.++++||+|||.. +++||||||+||+++.++.++|+|||++.....
T Consensus 81 e~~~~~~L~~~~~~~--~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~ 155 (316)
T cd05574 81 DYCPGGELFRLLQRQ--PGKCLSEEVARFYAAEVLLALEYLHLL---GIVYRDLKPENILLHESGHIMLSDFDLSKQSDV 155 (316)
T ss_pred EecCCCCHHHHHHhC--CCCccCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChHHeEEcCCCCEEEeecchhhcccc
Confidence 999999999998632 235688899999999999999999987 899999999999999999999999999875532
Q ss_pred CCCc---------------------------ccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCC
Q 004994 598 GSTN---------------------------ELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRS 649 (720)
Q Consensus 598 ~~~~---------------------------~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~ 649 (720)
.... .......++..|+|||.. ...++.++||||||+++|||++|+.||...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~ 235 (316)
T cd05574 156 EPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGS 235 (316)
T ss_pred cccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCC
Confidence 1110 011123567889999998 456889999999999999999999999654
Q ss_pred CCccccchhhhcccccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCC----HHHHHHH
Q 004994 650 RPRGEQSLVRWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPP----MSEIVQD 715 (720)
Q Consensus 650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt----~~evl~~ 715 (720)
..... +..+.+...........+.++.+++.+||+.||++||| ++|++++
T Consensus 236 ~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~ 289 (316)
T cd05574 236 NRDET----------------FSNILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQH 289 (316)
T ss_pred chHHH----------------HHHHhcCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcC
Confidence 32111 11111111100001113467899999999999999999 7777764
No 293
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=1.2e-34 Score=303.19 Aligned_cols=267 Identities=20% Similarity=0.243 Sum_probs=193.9
Q ss_pred hcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEE
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVY 517 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 517 (720)
+++|...+.||+|+||.||+|.. .+|+.||+|++..... ......+.+|+++++.++|+||+++++++.+.+..++||
T Consensus 4 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 82 (291)
T cd07870 4 ATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTE-EGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVF 82 (291)
T ss_pred cceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCc-CCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEE
Confidence 46788899999999999999954 5689999999865432 233346778999999999999999999999999999999
Q ss_pred eeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCC
Q 004994 518 DYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFS 597 (720)
Q Consensus 518 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~ 597 (720)
||+. +++.+.+... ...+.+.....++.++++||.|||+. +|+||||||+||+++.++++||+|||+++....
T Consensus 83 e~~~-~~l~~~~~~~---~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~ 155 (291)
T cd07870 83 EYMH-TDLAQYMIQH---PGGLHPYNVRLFMFQLLRGLAYIHGQ---HILHRDLKPQNLLISYLGELKLADFGLARAKSI 155 (291)
T ss_pred eccc-CCHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEEcCCCcEEEeccccccccCC
Confidence 9996 5777666422 23467788889999999999999987 899999999999999999999999999976432
Q ss_pred CCCcccccCccccccCCCCccCCC--CCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchh---hhh
Q 004994 598 GSTNELSEGLLTAHGSGAPEFESG--SYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDID---ALS 672 (720)
Q Consensus 598 ~~~~~~~~~~~~~~~~~aPE~~~~--~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~---~~~ 672 (720)
.. .......++..|+|||...+ .++.++|||||||++|||+||+.||.......+.-...|......... .+.
T Consensus 156 ~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (291)
T cd07870 156 PS--QTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVS 233 (291)
T ss_pred CC--CCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhh
Confidence 21 11223346788999998743 578899999999999999999999975432111000000000000000 000
Q ss_pred ---hhcCC---C-CCchh---h--HHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 673 ---RMVDP---S-LDGAY---L--AKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 673 ---~~~~~---~-~~~~~---~--~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
..... . ..... . ......+.+++.+|+..||++|||++|++.+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h 288 (291)
T cd07870 234 KLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLH 288 (291)
T ss_pred hcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcC
Confidence 00000 0 00000 0 0113567899999999999999999999864
No 294
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=6e-35 Score=304.04 Aligned_cols=266 Identities=19% Similarity=0.263 Sum_probs=196.2
Q ss_pred CCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEeeC
Q 004994 442 FSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDYG 520 (720)
Q Consensus 442 ~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 520 (720)
|+..+.||+|++|.||+|.. .+|..||+|++..........+.+..|++++++++|||++++++++.+.+..+++|||+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~ 80 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL 80 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence 55678999999999999965 57999999998755433444567889999999999999999999999999999999999
Q ss_pred CCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCCC
Q 004994 521 GNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGST 600 (720)
Q Consensus 521 ~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~~ 600 (720)
+ ++|.+++.... ...+++..+..++.++++||+|||+. +++||||+|+||++++++.+||+|||+++.+.....
T Consensus 81 ~-~~l~~~~~~~~--~~~~~~~~~~~~~~~i~~~L~~lH~~---~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~ 154 (283)
T cd07835 81 D-LDLKKYMDSSP--LTGLDPPLIKSYLYQLLQGIAYCHSH---RVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVR 154 (283)
T ss_pred C-cCHHHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCcEEEeecccccccCCCcc
Confidence 5 68998885432 14689999999999999999999987 899999999999999999999999999976532211
Q ss_pred cccccCccccccCCCCccCC--CCCCCccchHhHHHHHHHHHhCCCCCCCCCCcccc-chhhhccc-------ccCchhh
Q 004994 601 NELSEGLLTAHGSGAPEFES--GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQ-SLVRWAIP-------RLHDIDA 670 (720)
Q Consensus 601 ~~~~~~~~~~~~~~aPE~~~--~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~-~~~~~~~~-------~~~~~~~ 670 (720)
......++..|+|||+.. ..++.++|||||||++|||++|+.||......... .+.++... .......
T Consensus 155 --~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (283)
T cd07835 155 --TYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPD 232 (283)
T ss_pred --ccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchh
Confidence 111224567899999873 34789999999999999999999999754321110 11111000 0000000
Q ss_pred hhhhcCC---CCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 671 LSRMVDP---SLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 671 ~~~~~~~---~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
....+.. ..........+..+.+++.+|++.||++|||++|++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 280 (283)
T cd07835 233 YKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQH 280 (283)
T ss_pred hhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 0000000 00000111223578899999999999999999999864
No 295
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=1.9e-34 Score=296.74 Aligned_cols=252 Identities=27% Similarity=0.387 Sum_probs=201.8
Q ss_pred cCCCCCCeeccCCCceEEEEEeC-CCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEe
Q 004994 440 NSFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYD 518 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 518 (720)
++|+..+.||+|++|.||+|... +++.||||++...... .....+..|++.+.+++|+||+++++++...+..++|||
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 79 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDE-EFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLE 79 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcch-HHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEE
Confidence 36778899999999999999665 5999999998754322 445789999999999999999999999999999999999
Q ss_pred eCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHh-cCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCC
Q 004994 519 YGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQE-VCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFS 597 (720)
Q Consensus 519 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~-~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~ 597 (720)
|+++++|.+++... ..+++..+..++.++++|++|||+ . +++||||+|+||+++.++.++|+|||++.....
T Consensus 80 ~~~~~~L~~~l~~~----~~l~~~~~~~~~~~l~~~l~~lh~~~---~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~ 152 (264)
T cd06623 80 YMDGGSLADLLKKV----GKIPEPVLAYIARQILKGLDYLHTKR---HIIHRDIKPSNLLINSKGEVKIADFGISKVLEN 152 (264)
T ss_pred ecCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHhccC---CCccCCCCHHHEEECCCCCEEEccCccceeccc
Confidence 99999999998532 568899999999999999999998 6 999999999999999999999999999987643
Q ss_pred CCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcC
Q 004994 598 GSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVD 676 (720)
Q Consensus 598 ~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (720)
.... .....++..|+|||.. .+.++.++||||||+++|||+||+.||................ ....
T Consensus 153 ~~~~--~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~----------~~~~ 220 (264)
T cd06623 153 TLDQ--CNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAIC----------DGPP 220 (264)
T ss_pred CCCc--ccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHh----------cCCC
Confidence 2211 1234567889999988 5568899999999999999999999997643211111111110 0001
Q ss_pred CCCCchhhHH-HHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 677 PSLDGAYLAK-SLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 677 ~~~~~~~~~~-~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
+.. ... .+..+.+++.+||+.+|++||++.|++++
T Consensus 221 ~~~----~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 221 PSL----PAEEFSPEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred CCC----CcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 111 111 34678899999999999999999999975
No 296
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=1.8e-34 Score=299.58 Aligned_cols=247 Identities=22% Similarity=0.348 Sum_probs=196.3
Q ss_pred CCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEee
Q 004994 441 SFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDY 519 (720)
Q Consensus 441 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 519 (720)
-|...+.||+|+||.||+|.. .++..||+|.+..... ....+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA-EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEY 83 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccc-hHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEe
Confidence 466778999999999999965 5788999999864322 23446788999999999999999999999999999999999
Q ss_pred CCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCC
Q 004994 520 GGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGS 599 (720)
Q Consensus 520 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~ 599 (720)
+++++|.+++.. ..+++.....++.+++.|+.|||+. +++|+||||+||+++.++.++|+|||++..+....
T Consensus 84 ~~~~~l~~~i~~-----~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~ 155 (277)
T cd06641 84 LGGGSALDLLEP-----GPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ 155 (277)
T ss_pred CCCCcHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHccC---CeecCCCCHHhEEECCCCCEEEeecccceecccch
Confidence 999999998852 3578999999999999999999986 99999999999999999999999999987653321
Q ss_pred CcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcCCC
Q 004994 600 TNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPS 678 (720)
Q Consensus 600 ~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (720)
. ......++.+|++||.. ...++.++|||||||++|||++|+.||........ .... .....+.
T Consensus 156 ~--~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~---~~~~----------~~~~~~~ 220 (277)
T cd06641 156 I--KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKV---LFLI----------PKNNPPT 220 (277)
T ss_pred h--hhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHH---HHHH----------hcCCCCC
Confidence 1 11224567789999988 45688999999999999999999999964322110 0000 0000011
Q ss_pred CCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 679 LDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 679 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
+ ....+.++.+++.+||+.+|++||++++++++
T Consensus 221 ~----~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 221 L----EGNYSKPLKEFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred C----CcccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 1 12234567899999999999999999999985
No 297
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=3.1e-35 Score=307.67 Aligned_cols=247 Identities=24% Similarity=0.334 Sum_probs=194.6
Q ss_pred CCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEeeC
Q 004994 442 FSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDYG 520 (720)
Q Consensus 442 ~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 520 (720)
|.....||+|+||.||++.. .++..||||.+.... ....+.+.+|+..++.++|+||+++++.+...+..++||||+
T Consensus 24 ~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~ 101 (292)
T cd06658 24 LDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRK--QQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFL 101 (292)
T ss_pred HhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecch--HHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCC
Confidence 33346799999999999965 468899999986432 334567889999999999999999999999999999999999
Q ss_pred CCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCCC
Q 004994 521 GNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGST 600 (720)
Q Consensus 521 ~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~~ 600 (720)
++++|.+++.. ..+++.....++.+++.||.|||+. +|+||||||+||++++++.+||+|||++.......
T Consensus 102 ~~~~L~~~~~~-----~~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~- 172 (292)
T cd06658 102 EGGALTDIVTH-----TRMNEEQIATVCLSVLRALSYLHNQ---GVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEV- 172 (292)
T ss_pred CCCcHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEccCcchhhccccc-
Confidence 99999998742 3478889999999999999999987 89999999999999999999999999987653221
Q ss_pred cccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcCCCC
Q 004994 601 NELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSL 679 (720)
Q Consensus 601 ~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (720)
.......++..|+|||.. ...++.++|||||||++|||++|+.||.......... .......+..
T Consensus 173 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~-------------~~~~~~~~~~ 238 (292)
T cd06658 173 -PKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMR-------------RIRDNLPPRV 238 (292)
T ss_pred -ccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH-------------HHHhcCCCcc
Confidence 112234577889999998 4568999999999999999999999996533211110 0111111111
Q ss_pred CchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 680 DGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 680 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.. .......+.+++.+|+..||++|||++|++++
T Consensus 239 ~~--~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 239 KD--SHKVSSVLRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred cc--ccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 11 11223567899999999999999999999976
No 298
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=1.6e-34 Score=300.54 Aligned_cols=260 Identities=20% Similarity=0.311 Sum_probs=191.0
Q ss_pred CCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccC-CCceeEEEeEeccC--CeEEEEE
Q 004994 442 FSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLR-HGNIVELIGYCNEH--GQHLLVY 517 (720)
Q Consensus 442 ~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~~~~~~~--~~~~lv~ 517 (720)
|...+.||+|+||.||+|.. .+++.||+|+++...... ......+|+.++.++. |+||+++++++.+. +..++||
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~-~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~ 79 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSL-EQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVF 79 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCc-hhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEE
Confidence 45568899999999999964 578999999987543222 2234457888888885 99999999999877 8899999
Q ss_pred eeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCC
Q 004994 518 DYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFS 597 (720)
Q Consensus 518 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~ 597 (720)
||++ +++.+.+... ...++|..+..++.++++||+|||+. +++||||||+||+++. +.+||+|||+++.+..
T Consensus 80 e~~~-~~l~~~l~~~---~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~ 151 (282)
T cd07831 80 ELMD-MNLYELIKGR---KRPLPEKRVKSYMYQLLKSLDHMHRN---GIFHRDIKPENILIKD-DILKLADFGSCRGIYS 151 (282)
T ss_pred ecCC-ccHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEcC-CCeEEEeccccccccc
Confidence 9997 4787777532 24689999999999999999999987 8999999999999999 9999999999987643
Q ss_pred CCCcccccCccccccCCCCccC--CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhc
Q 004994 598 GSTNELSEGLLTAHGSGAPEFE--SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMV 675 (720)
Q Consensus 598 ~~~~~~~~~~~~~~~~~aPE~~--~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (720)
... .....++..|+|||.. .+.++.++|||||||++|||++|+.||...+..+.............. ......
T Consensus 152 ~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 226 (282)
T cd07831 152 KPP---YTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDA--EVLKKF 226 (282)
T ss_pred CCC---cCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCH--HHHHhh
Confidence 221 1224467889999975 345788999999999999999999999764432211100000000000 000000
Q ss_pred ------C---CCCCc----hhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 676 ------D---PSLDG----AYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 676 ------~---~~~~~----~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
+ +...+ ......+.++.+++.+||+.+|++|||+++++++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 279 (282)
T cd07831 227 RKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRH 279 (282)
T ss_pred cccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhC
Confidence 0 00000 0012335788999999999999999999999875
No 299
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=1.6e-34 Score=302.04 Aligned_cols=246 Identities=24% Similarity=0.323 Sum_probs=197.1
Q ss_pred cCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEeccccc-ccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVS-QRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVY 517 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 517 (720)
++|+..+.||+|+||.||++.. .+++.||+|++.+... .....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 3677889999999999999965 4689999999864322 2234567889999999999999999999999999999999
Q ss_pred eeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCC
Q 004994 518 DYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFS 597 (720)
Q Consensus 518 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~ 597 (720)
||+++++|.+++.. ...+++..+..++.++++||.|||+. +++||||+|+||+++.++.+||+|||+++....
T Consensus 81 e~~~~~~L~~~~~~----~~~l~~~~~~~~~~qil~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~ 153 (290)
T cd05580 81 EYVPGGELFSHLRK----SGRFPEPVARFYAAQVVLALEYLHSL---DIVYRDLKPENLLLDSDGYIKITDFGFAKRVKG 153 (290)
T ss_pred ecCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEeeCCCccccCC
Confidence 99999999999854 24688889999999999999999987 999999999999999999999999999987643
Q ss_pred CCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcC
Q 004994 598 GSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVD 676 (720)
Q Consensus 598 ~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (720)
. .....++..|+|||.. ...++.++||||||+++|||++|+.||........ ...+..
T Consensus 154 ~-----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~----------------~~~~~~ 212 (290)
T cd05580 154 R-----TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQI----------------YEKILE 212 (290)
T ss_pred C-----CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHH----------------HHHHhc
Confidence 3 2234577889999987 45688899999999999999999999965431110 000111
Q ss_pred CCCCchhhHHHHHHHHHHHHHHhccCCCCCC-----CHHHHHHH
Q 004994 677 PSLDGAYLAKSLSRFADIISRCVQWEPGFRP-----PMSEIVQD 715 (720)
Q Consensus 677 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~evl~~ 715 (720)
... ..+......+.+++.+||+.||.+|+ +++|++++
T Consensus 213 ~~~--~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~ 254 (290)
T cd05580 213 GKV--RFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNH 254 (290)
T ss_pred CCc--cCCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcC
Confidence 000 01112235778999999999999999 77887754
No 300
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=9.9e-35 Score=310.43 Aligned_cols=269 Identities=21% Similarity=0.306 Sum_probs=198.0
Q ss_pred HhcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHcc-CCCceeEEEeEeccC--CeE
Q 004994 438 YTNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRL-RHGNIVELIGYCNEH--GQH 513 (720)
Q Consensus 438 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~--~~~ 513 (720)
+.++|+..+.||+|+||.||+|.. .+|+.||+|++.+..........+.+|+.+++++ +||||++++++|... ...
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~ 84 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDI 84 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceE
Confidence 456788889999999999999965 4688999999865433334445677899999999 999999999998653 468
Q ss_pred EEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCC
Q 004994 514 LLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAP 593 (720)
Q Consensus 514 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~ 593 (720)
++||||++ ++|.+++.. ..++|..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 85 ~lv~e~~~-~~L~~~~~~-----~~~~~~~~~~i~~qi~~~L~~LH~~---~i~H~dl~p~nill~~~~~~kl~d~g~~~ 155 (337)
T cd07852 85 YLVFEYME-TDLHAVIRA-----NILEDVHKRYIMYQLLKALKYIHSG---NVIHRDLKPSNILLNSDCRVKLADFGLAR 155 (337)
T ss_pred EEEecccc-cCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccchh
Confidence 99999998 488888743 2678889999999999999999987 99999999999999999999999999998
Q ss_pred CCCCCCCc---ccccCccccccCCCCccCC--CCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCch
Q 004994 594 LLFSGSTN---ELSEGLLTAHGSGAPEFES--GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDI 668 (720)
Q Consensus 594 ~~~~~~~~---~~~~~~~~~~~~~aPE~~~--~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~ 668 (720)
.+...... .......++..|+|||... ..++.++|||||||++|||+||+.||...........+..........
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~ 235 (337)
T cd07852 156 SLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAE 235 (337)
T ss_pred ccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHH
Confidence 76433221 1222345788899999873 457899999999999999999999996543322111111110000000
Q ss_pred --hh-----hhhhcC----CCCC--chhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 669 --DA-----LSRMVD----PSLD--GAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 669 --~~-----~~~~~~----~~~~--~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.. ...+++ .... .......+.++.+++.+||+.||++|||+.+++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 236 DIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred HHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 00 000000 0000 00011134678899999999999999999999975
No 301
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=1.2e-34 Score=303.70 Aligned_cols=270 Identities=19% Similarity=0.269 Sum_probs=195.3
Q ss_pred cCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccC-CCceeEEEeEeccCCe-----
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLR-HGNIVELIGYCNEHGQ----- 512 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~~~~~~~~~----- 512 (720)
++|+..+.||+|+||.||+|.. .+|+.||+|++............+.+|+++++.++ |+||+++++++...+.
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 3678889999999999999965 56899999998755433344567888999999995 6999999999876555
Q ss_pred EEEEEeeCCCCCHHHHhhccchh-ccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcC-CCCeEEcccc
Q 004994 513 HLLVYDYGGNCTLHDLLHSDEEA-HKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDE-KLIVRVSDCG 590 (720)
Q Consensus 513 ~~lv~e~~~~gsL~~~l~~~~~~-~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~-~~~~kl~DFG 590 (720)
.++||||+++ +|.+++...... ...+++.....++.|+++||.|||.. +|+||||||+||+++. ++.+||+|||
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~~~nil~~~~~~~~kl~dfg 156 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKH---GVMHRDLKPQNLLVDKQKGLLKIADLG 156 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEecCCCeEEEeecc
Confidence 8999999986 788887543222 34689999999999999999999987 9999999999999998 8899999999
Q ss_pred CCCCCCCCCCcccccCccccccCCCCccCC--CCCCCccchHhHHHHHHHHHhCCCCCCCCCCcccc-chhhhc-cccc-
Q 004994 591 LAPLLFSGSTNELSEGLLTAHGSGAPEFES--GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQ-SLVRWA-IPRL- 665 (720)
Q Consensus 591 la~~~~~~~~~~~~~~~~~~~~~~aPE~~~--~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~-~~~~~~-~~~~- 665 (720)
+++.+...... .....++..|+|||+.. ..++.++|||||||++|||++|+.||......... .+.... .+.-
T Consensus 157 ~~~~~~~~~~~--~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (295)
T cd07837 157 LGRAFSIPVKS--YTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQ 234 (295)
T ss_pred cceecCCCccc--cCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChh
Confidence 98765322111 11224567899999873 35789999999999999999999999754322111 000000 0000
Q ss_pred --Cchhhhhhhc-CCCCC----chhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 666 --HDIDALSRMV-DPSLD----GAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 666 --~~~~~~~~~~-~~~~~----~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.......... -+... .........++.+++.+||+.||++||+++|++.+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~ 291 (295)
T cd07837 235 VWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTH 291 (295)
T ss_pred hCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 0000000000 00000 00011234678899999999999999999999864
No 302
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=1.4e-34 Score=311.23 Aligned_cols=265 Identities=17% Similarity=0.211 Sum_probs=196.0
Q ss_pred HhcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccC------
Q 004994 438 YTNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEH------ 510 (720)
Q Consensus 438 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~------ 510 (720)
..++|+..+.||+|+||.||+|.. .+|+.||+|++.+........+.+.+|++++++++|+||+++++++...
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 93 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence 457899999999999999999954 5799999999875433344456778899999999999999999988543
Q ss_pred CeEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEcccc
Q 004994 511 GQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCG 590 (720)
Q Consensus 511 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFG 590 (720)
...++||||+.+ +|.+.+.. .+++.....++.|+++||+|||.. +|+||||||+||+++.++.+||+|||
T Consensus 94 ~~~~lv~e~~~~-~l~~~~~~------~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nil~~~~~~~kL~Dfg 163 (353)
T cd07850 94 QDVYLVMELMDA-NLCQVIQM------DLDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 163 (353)
T ss_pred CcEEEEEeccCC-CHHHHHhh------cCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccCc
Confidence 357999999975 78777642 277888889999999999999987 99999999999999999999999999
Q ss_pred CCCCCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccc-hhhhcccccC--
Q 004994 591 LAPLLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQS-LVRWAIPRLH-- 666 (720)
Q Consensus 591 la~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~-~~~~~~~~~~-- 666 (720)
+++...... ......++..|+|||.. ...++.++|||||||++|+|++|+.||...+...... +.........
T Consensus 164 ~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 240 (353)
T cd07850 164 LARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEF 240 (353)
T ss_pred cceeCCCCC---CCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHH
Confidence 998653321 12234567889999988 5578999999999999999999999997543211100 0000000000
Q ss_pred ------------------chhhhhhhcCCC----CCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 667 ------------------DIDALSRMVDPS----LDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 667 ------------------~~~~~~~~~~~~----~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
......+..... .........+.++.+++.+||+.||++|||+.|++++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~ 311 (353)
T cd07850 241 MSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQH 311 (353)
T ss_pred HHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 000000111000 0000012335678899999999999999999999865
No 303
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=6.3e-35 Score=304.78 Aligned_cols=256 Identities=25% Similarity=0.360 Sum_probs=191.2
Q ss_pred CCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccC-CCceeEEEeEeccCCeEEEEEe
Q 004994 441 SFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLR-HGNIVELIGYCNEHGQHLLVYD 518 (720)
Q Consensus 441 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~~~~~~~~~~~lv~e 518 (720)
+|...+.||+|+||.||++.. .+++.||+|.+...... .....+.+|+.++.++. |+||+++++++...+..+++||
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e 83 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDE-KEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICME 83 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccCh-HHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEe
Confidence 344557899999999999955 56899999998754322 34567889999999996 9999999999998889999999
Q ss_pred eCCCCCHHHHhhcc-chhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCC
Q 004994 519 YGGNCTLHDLLHSD-EEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFS 597 (720)
Q Consensus 519 ~~~~gsL~~~l~~~-~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~ 597 (720)
|+.. ++.++.... ......+++.....++.++++||+|||+. .+++||||||+||+++.++.+||+|||+++.+..
T Consensus 84 ~~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~--~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~ 160 (288)
T cd06616 84 LMDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEE--LKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVD 160 (288)
T ss_pred cccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhc--CCeeccCCCHHHEEEccCCcEEEeecchhHHhcc
Confidence 9874 555543211 11235688999999999999999999974 2899999999999999999999999999976532
Q ss_pred CCCcccccCccccccCCCCccCCC----CCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhh
Q 004994 598 GSTNELSEGLLTAHGSGAPEFESG----SYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSR 673 (720)
Q Consensus 598 ~~~~~~~~~~~~~~~~~aPE~~~~----~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (720)
... .....++..|+|||.+.+ .++.++|||||||++|||++|+.||....... ....+. ..
T Consensus 161 ~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-~~~~~~----~~------- 225 (288)
T cd06616 161 SIA---KTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVF-DQLTQV----VK------- 225 (288)
T ss_pred CCc---cccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHH-HHHhhh----cC-------
Confidence 211 122356778999998843 48899999999999999999999996432100 000000 00
Q ss_pred hcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 674 MVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 674 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
-..+.+........+.++.+++.+||+.||++|||++||+++
T Consensus 226 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 226 GDPPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEH 267 (288)
T ss_pred CCCCcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 001111111112345678999999999999999999999875
No 304
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=1.1e-34 Score=297.48 Aligned_cols=251 Identities=22% Similarity=0.323 Sum_probs=196.8
Q ss_pred CCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEee
Q 004994 441 SFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDY 519 (720)
Q Consensus 441 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 519 (720)
+|...+.||+|+||.||+|.. .+|..||+|.+..........+.+.+|++++++++|+||+++++.+.+.+..++|+||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 80 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY 80 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence 366778999999999999965 4688999999865432234456788999999999999999999999999999999999
Q ss_pred CCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCC-CeEEccccCCCCCCCC
Q 004994 520 GGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKL-IVRVSDCGLAPLLFSG 598 (720)
Q Consensus 520 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~-~~kl~DFGla~~~~~~ 598 (720)
+++++|.+++.... ...+++..+..++.++++||+|||+. +++|+||||+||++++++ .+||+|||.+......
T Consensus 81 ~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~ 155 (257)
T cd08225 81 CDGGDLMKRINRQR--GVLFSEDQILSWFVQISLGLKHIHDR---KILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDS 155 (257)
T ss_pred CCCCcHHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEcCCCCeEEecccccchhccCC
Confidence 99999999986422 23578999999999999999999987 899999999999999885 5699999999766432
Q ss_pred CCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcCC
Q 004994 599 STNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDP 677 (720)
Q Consensus 599 ~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (720)
. .......++..|+|||.. ...++.++|||||||++|||++|+.||........ +.. .......+
T Consensus 156 ~--~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~---~~~---------~~~~~~~~ 221 (257)
T cd08225 156 M--ELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQL---VLK---------ICQGYFAP 221 (257)
T ss_pred c--ccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHH---HHH---------HhcccCCC
Confidence 2 112234577889999987 45689999999999999999999999964322110 000 00000110
Q ss_pred CCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 678 SLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 678 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
. ....+.++.+++.+|+..+|++|||+.|++++
T Consensus 222 ~-----~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~ 254 (257)
T cd08225 222 I-----SPNFSRDLRSLISQLFKVSPRDRPSITSILKR 254 (257)
T ss_pred C-----CCCCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 0 11123568899999999999999999999875
No 305
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=4.9e-34 Score=302.26 Aligned_cols=248 Identities=24% Similarity=0.352 Sum_probs=194.3
Q ss_pred CCCCCCeeccCCCceEEEEEe-CCCcEEEEEEeccccc-ccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEe
Q 004994 441 SFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVS-QRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYD 518 (720)
Q Consensus 441 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 518 (720)
.|...+.||+|+||.||+|.. .++..||+|++..... .....+.+..|++++++++|+|++++++++.+.+..++|||
T Consensus 26 ~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 105 (317)
T cd06635 26 LFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVME 105 (317)
T ss_pred hhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEe
Confidence 366778999999999999965 5689999999864321 22334578899999999999999999999999999999999
Q ss_pred eCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCC
Q 004994 519 YGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSG 598 (720)
Q Consensus 519 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~ 598 (720)
|+.+ ++.+.+.. ....++|..+..++.++++||.|||+. +|+||||+|+||+++.++.+||+|||++......
T Consensus 106 ~~~g-~l~~~~~~---~~~~l~~~~~~~i~~~i~~~l~~lH~~---~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~ 178 (317)
T cd06635 106 YCLG-SASDLLEV---HKKPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASIASPA 178 (317)
T ss_pred CCCC-CHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcccEEECCCCCEEEecCCCccccCCc
Confidence 9975 77777642 234588999999999999999999987 8999999999999999999999999998754322
Q ss_pred CCcccccCccccccCCCCccC----CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhh
Q 004994 599 STNELSEGLLTAHGSGAPEFE----SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRM 674 (720)
Q Consensus 599 ~~~~~~~~~~~~~~~~aPE~~----~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (720)
....++..|+|||+. .+.++.++|||||||++|||++|+.||......... ..+
T Consensus 179 ------~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~----------------~~~ 236 (317)
T cd06635 179 ------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSAL----------------YHI 236 (317)
T ss_pred ------ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHH----------------HHH
Confidence 123567789999986 346889999999999999999999998653211110 001
Q ss_pred cCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 004994 675 VDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLL 717 (720)
Q Consensus 675 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 717 (720)
.............+..+.+++.+||+.+|.+||++.++++++.
T Consensus 237 ~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~ 279 (317)
T cd06635 237 AQNESPTLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMF 279 (317)
T ss_pred HhccCCCCCCccccHHHHHHHHHHccCCcccCcCHHHHHhChh
Confidence 1000000111223456889999999999999999999998753
No 306
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=4.4e-34 Score=292.66 Aligned_cols=253 Identities=25% Similarity=0.357 Sum_probs=201.9
Q ss_pred CCCCCCeeccCCCceEEEEEeC-CCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccC--CeEEEEE
Q 004994 441 SFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEH--GQHLLVY 517 (720)
Q Consensus 441 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~--~~~~lv~ 517 (720)
+|...+.||+|++|.||+|... +++.|++|++..........+.+.+|++++++++|+||+++++.+.+. +..++|+
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 80 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL 80 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence 3667789999999999999665 789999999875543334567889999999999999999999999888 8999999
Q ss_pred eeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCC
Q 004994 518 DYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFS 597 (720)
Q Consensus 518 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~ 597 (720)
||+++++|.+++... ..+++..+..++.++++||+|||+. +++|+||+|+||++++++.+||+|||.+.....
T Consensus 81 e~~~~~~L~~~~~~~----~~~~~~~~~~~~~~l~~~l~~lh~~---~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~ 153 (260)
T cd06606 81 EYVSGGSLSSLLKKF----GKLPEPVIRKYTRQILEGLAYLHSN---GIVHRDIKGANILVDSDGVVKLADFGCAKRLGD 153 (260)
T ss_pred EecCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEcccccEEeccc
Confidence 999999999998532 3789999999999999999999986 999999999999999999999999999987654
Q ss_pred CCCcccccCccccccCCCCccCC-CCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcC
Q 004994 598 GSTNELSEGLLTAHGSGAPEFES-GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVD 676 (720)
Q Consensus 598 ~~~~~~~~~~~~~~~~~aPE~~~-~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (720)
...........++..|.+||... ..++.++||||||+++|+|++|+.||....... . . ..+...
T Consensus 154 ~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~--~-~------------~~~~~~ 218 (260)
T cd06606 154 IETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPM--A-A------------LYKIGS 218 (260)
T ss_pred ccccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchH--H-H------------HHhccc
Confidence 33211123355678899999984 458999999999999999999999997543100 0 0 000110
Q ss_pred CCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 677 PSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 677 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.......+...+..+.+++.+|++.+|++||++.|++++
T Consensus 219 ~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~ 257 (260)
T cd06606 219 SGEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQH 257 (260)
T ss_pred cCCCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhhC
Confidence 001111122234678899999999999999999999875
No 307
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=3.5e-34 Score=298.81 Aligned_cols=252 Identities=25% Similarity=0.369 Sum_probs=200.0
Q ss_pred HhcCCCCCCeeccCCCceEEEEEeC-CCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEE
Q 004994 438 YTNSFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLV 516 (720)
Q Consensus 438 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 516 (720)
.++.|+..+.||+|++|.||+|... ++..||+|++..... ..+.+.+|+++++.++|+||+++++++...+..++|
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 93 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ---NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVV 93 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch---hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEE
Confidence 4566788889999999999999765 688999999974422 456788999999999999999999999999999999
Q ss_pred EeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCC
Q 004994 517 YDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLF 596 (720)
Q Consensus 517 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~ 596 (720)
+||+++++|.+++.... ..+++..+..++.++++||+|||.. +++|+||||+||+++.++.+||+|||++....
T Consensus 94 ~e~~~~~~L~~~l~~~~---~~l~~~~~~~i~~~i~~~L~~lH~~---gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~ 167 (286)
T cd06614 94 MEYMDGGSLTDIITQNF---VRMNEPQIAYVCREVLQGLEYLHSQ---NVIHRDIKSDNILLSKDGSVKLADFGFAAQLT 167 (286)
T ss_pred EeccCCCcHHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCChhhEEEcCCCCEEECccchhhhhc
Confidence 99999999999996422 3789999999999999999999986 99999999999999999999999999986553
Q ss_pred CCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhc
Q 004994 597 SGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMV 675 (720)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (720)
.... ......++..|++||.. ...++.++|||||||++|||++|+.||....+.... ...... ..
T Consensus 168 ~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~--~~~~~~----------~~ 233 (286)
T cd06614 168 KEKS--KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRAL--FLITTK----------GI 233 (286)
T ss_pred cchh--hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHH--HHHHhc----------CC
Confidence 2211 11223467789999987 456899999999999999999999999653321110 000000 00
Q ss_pred CCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 676 DPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 676 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
+... .....+..+.+++.+||+.+|.+|||+.+++++
T Consensus 234 -~~~~--~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~ 270 (286)
T cd06614 234 -PPLK--NPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQH 270 (286)
T ss_pred -CCCc--chhhCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 0000 111234678899999999999999999999864
No 308
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=2.6e-34 Score=300.87 Aligned_cols=249 Identities=22% Similarity=0.344 Sum_probs=198.2
Q ss_pred cCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEe
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYD 518 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 518 (720)
++|...+.||+|+||.||++.. .+++.||+|.+... .....+.+.+|+.++++++||||+++++++...+..++|+|
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~--~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e 96 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQ--QQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVME 96 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccc--cchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEe
Confidence 5788889999999999999954 57889999998533 22335678899999999999999999999999999999999
Q ss_pred eCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCC
Q 004994 519 YGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSG 598 (720)
Q Consensus 519 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~ 598 (720)
|+++++|.+++.. ..+++..+..++.+++.||.|||+. +++||||||+||+++.++.+||+|||++......
T Consensus 97 ~~~~~~L~~~~~~-----~~l~~~~~~~i~~~l~~al~~LH~~---gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~ 168 (293)
T cd06647 97 YLAGGSLTDVVTE-----TCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE 168 (293)
T ss_pred cCCCCcHHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHhC---CEeeccCCHHHEEEcCCCCEEEccCcceeccccc
Confidence 9999999998853 3477888999999999999999987 9999999999999999999999999998765432
Q ss_pred CCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcCC
Q 004994 599 STNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDP 677 (720)
Q Consensus 599 ~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (720)
.. ......++..|++||.. .+.++.++|||||||++||+++|+.||............. . .+
T Consensus 169 ~~--~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~--~-------------~~ 231 (293)
T cd06647 169 QS--KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIA--T-------------NG 231 (293)
T ss_pred cc--ccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehh--c-------------CC
Confidence 21 12234577889999987 5568999999999999999999999997543322111000 0 00
Q ss_pred CCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 678 SLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 678 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.............+.+++.+||..+|++||++.+++++
T Consensus 232 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 232 TPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred CCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00000112234568899999999999999999999876
No 309
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=1.3e-34 Score=306.48 Aligned_cols=270 Identities=21% Similarity=0.312 Sum_probs=195.0
Q ss_pred CCCCCeeccCCCceEEEEEeC---CCcEEEEEEecccc-cccccHHHHHHHHHHHHccCCCceeEEEeEeccC--CeEEE
Q 004994 442 FSEGNFIGEGLLGSVYKAELP---GGKLLAVKKLSNTV-SQRQTDEEFLELASTISRLRHGNIVELIGYCNEH--GQHLL 515 (720)
Q Consensus 442 ~~~~~~lg~G~~g~Vy~~~~~---~g~~vavK~l~~~~-~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~--~~~~l 515 (720)
|...+.||+|+||.||+|... +++.||+|.+.... ......+.+.+|++++++++||||+++++++.+. +..++
T Consensus 2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 81 (316)
T cd07842 2 YEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVYL 81 (316)
T ss_pred ceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEEE
Confidence 667788999999999999653 58899999997643 2233346778899999999999999999999887 78999
Q ss_pred EEeeCCCCCHHHHhhccchh-ccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcC----CCCeEEcccc
Q 004994 516 VYDYGGNCTLHDLLHSDEEA-HKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDE----KLIVRVSDCG 590 (720)
Q Consensus 516 v~e~~~~gsL~~~l~~~~~~-~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~----~~~~kl~DFG 590 (720)
||||+++ ++.+++...... ...++......++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||
T Consensus 82 v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg 157 (316)
T cd07842 82 LFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSN---WVLHRDLKPANILVMGEGPERGVVKIGDLG 157 (316)
T ss_pred EEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEEcCCCCccceEEECCCc
Confidence 9999986 666666432222 23678889999999999999999987 8999999999999999 9999999999
Q ss_pred CCCCCCCCCC-cccccCccccccCCCCccCC--CCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccc------hhhhc
Q 004994 591 LAPLLFSGST-NELSEGLLTAHGSGAPEFES--GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQS------LVRWA 661 (720)
Q Consensus 591 la~~~~~~~~-~~~~~~~~~~~~~~aPE~~~--~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~------~~~~~ 661 (720)
+++.+..... ........++..|+|||... ..++.++|||||||++|||++|+.||.......... .....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (316)
T cd07842 158 LARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERI 237 (316)
T ss_pred cccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHH
Confidence 9987643222 11222345678899999773 357899999999999999999999997544322000 00000
Q ss_pred c--------------cccCchhhhhhh-cCCCCC-----chhhH--HHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 662 I--------------PRLHDIDALSRM-VDPSLD-----GAYLA--KSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 662 ~--------------~~~~~~~~~~~~-~~~~~~-----~~~~~--~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
. ....+.....+. ...... ..... ....++.+++.+||+.||++|||+.|++++
T Consensus 238 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~ 313 (316)
T cd07842 238 FEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEH 313 (316)
T ss_pred HHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 0 000000000000 000000 00001 223568899999999999999999999864
No 310
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=3e-34 Score=298.21 Aligned_cols=243 Identities=24% Similarity=0.286 Sum_probs=185.5
Q ss_pred eeccCCCceEEEEEe-CCCcEEEEEEecccccccc-cHHHHHHHHHH---HHccCCCceeEEEeEeccCCeEEEEEeeCC
Q 004994 447 FIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQ-TDEEFLELAST---ISRLRHGNIVELIGYCNEHGQHLLVYDYGG 521 (720)
Q Consensus 447 ~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~-~~~~~~~e~~~---l~~l~H~niv~l~~~~~~~~~~~lv~e~~~ 521 (720)
+||+|+||.||++.. .+++.||+|.+.+...... ....+.+|..+ +...+||||+.+++++...+..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 489999999999965 5689999999875432222 22333444433 334479999999999999999999999999
Q ss_pred CCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCCCc
Q 004994 522 NCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTN 601 (720)
Q Consensus 522 ~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~ 601 (720)
+++|.+++.. ...+++.....++.|++.||.|||+. +|+||||||+|||+++++.+||+|||++.......
T Consensus 81 ~~~L~~~i~~----~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~-- 151 (279)
T cd05633 81 GGDLHYHLSQ----HGVFSEKEMRFYATEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK-- 151 (279)
T ss_pred CCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcCCCCCCHHHEEECCCCCEEEccCCcceeccccC--
Confidence 9999988853 34689999999999999999999987 89999999999999999999999999987553221
Q ss_pred ccccCccccccCCCCccCC--CCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcCCCC
Q 004994 602 ELSEGLLTAHGSGAPEFES--GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSL 679 (720)
Q Consensus 602 ~~~~~~~~~~~~~aPE~~~--~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (720)
.....++..|+|||... ..++.++|||||||++|||++|+.||.............. .......
T Consensus 152 --~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~-----------~~~~~~~- 217 (279)
T cd05633 152 --PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRM-----------TLTVNVE- 217 (279)
T ss_pred --ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHH-----------hhcCCcC-
Confidence 12245788999999873 3578999999999999999999999965332111110000 0001111
Q ss_pred CchhhHHHHHHHHHHHHHHhccCCCCCC-----CHHHHHHH
Q 004994 680 DGAYLAKSLSRFADIISRCVQWEPGFRP-----PMSEIVQD 715 (720)
Q Consensus 680 ~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~evl~~ 715 (720)
.+...+.++.+++.+||..||++|| |++|++++
T Consensus 218 ---~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h 255 (279)
T cd05633 218 ---LPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEH 255 (279)
T ss_pred ---CccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence 1223346788999999999999999 69999876
No 311
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=2.3e-34 Score=303.81 Aligned_cols=268 Identities=24% Similarity=0.302 Sum_probs=196.1
Q ss_pred hcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccC--CeEEE
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEH--GQHLL 515 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~--~~~~l 515 (720)
.++|...+.||+|+||.||+|.. .+|+.||+|+++...........+.+|++++++++|+||+++++++.+. +..++
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL 85 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence 35788889999999999999965 5689999999875433333344567899999999999999999998654 56899
Q ss_pred EEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCC
Q 004994 516 VYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLL 595 (720)
Q Consensus 516 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~ 595 (720)
||||+.+ +|.+++... ...+++..+..++.|+++||+|||+. +++||||||+||++++++.+||+|||++...
T Consensus 86 v~e~~~~-~l~~~l~~~---~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~ 158 (309)
T cd07845 86 VMEYCEQ-DLASLLDNM---PTPFSESQVKCLMLQLLRGLQYLHEN---FIIHRDLKVSNLLLTDKGCLKIADFGLARTY 158 (309)
T ss_pred EEecCCC-CHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccceeeec
Confidence 9999975 788887532 35689999999999999999999997 8999999999999999999999999999876
Q ss_pred CCCCCcccccCccccccCCCCccCC--CCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhccc--------cc
Q 004994 596 FSGSTNELSEGLLTAHGSGAPEFES--GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIP--------RL 665 (720)
Q Consensus 596 ~~~~~~~~~~~~~~~~~~~aPE~~~--~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~--------~~ 665 (720)
..... ......++..|+|||... ..++.++|||||||++|||++|+.||...........+..... .+
T Consensus 159 ~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (309)
T cd07845 159 GLPAK--PMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGF 236 (309)
T ss_pred CCccC--CCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhh
Confidence 43221 111223467899999873 3578999999999999999999999975443221111110000 00
Q ss_pred Cchhhhhhhc-C-CCCCc--hhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 666 HDIDALSRMV-D-PSLDG--AYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 666 ~~~~~~~~~~-~-~~~~~--~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.......... . ..... .........+.+++.+||+.||++|||++|++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h 290 (309)
T cd07845 237 SDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALES 290 (309)
T ss_pred hcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 0000000000 0 00000 0001124567899999999999999999999875
No 312
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=2.3e-34 Score=301.44 Aligned_cols=268 Identities=19% Similarity=0.261 Sum_probs=193.7
Q ss_pred cCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEe
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYD 518 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 518 (720)
++|+..+.||+|++|+||+|.. .+|+.||+|.+..........+.+.+|++++++++|+||+++++++.+.+..++|||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE 81 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence 4678889999999999999965 478999999986543333444678899999999999999999999999999999999
Q ss_pred eCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcC-CCCeEEccccCCCCCCC
Q 004994 519 YGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDE-KLIVRVSDCGLAPLLFS 597 (720)
Q Consensus 519 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~-~~~~kl~DFGla~~~~~ 597 (720)
|+++ +|.+.+.... ...+++.....++.+++.||+|||+. +++||||||+||+++. ++.+||+|||++.....
T Consensus 82 ~~~~-~l~~~~~~~~--~~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~ 155 (294)
T PLN00009 82 YLDL-DLKKHMDSSP--DFAKNPRLIKTYLYQILRGIAYCHSH---RVLHRDLKPQNLLIDRRTNALKLADFGLARAFGI 155 (294)
T ss_pred cccc-cHHHHHHhCC--CCCcCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCcceEEEECCCCEEEEcccccccccCC
Confidence 9974 7777764322 23457778889999999999999987 8999999999999985 55799999999976532
Q ss_pred CCCcccccCccccccCCCCccCC--CCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccch-hhhcc-c------ccCc
Q 004994 598 GSTNELSEGLLTAHGSGAPEFES--GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSL-VRWAI-P------RLHD 667 (720)
Q Consensus 598 ~~~~~~~~~~~~~~~~~aPE~~~--~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~-~~~~~-~------~~~~ 667 (720)
... ......++..|+|||+.. ..++.++|||||||++|||+||+.||......+.... ..... + ....
T Consensus 156 ~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (294)
T PLN00009 156 PVR--TFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTS 233 (294)
T ss_pred Ccc--ccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhcccccc
Confidence 211 112234577899999873 3578999999999999999999999975432211110 00000 0 0000
Q ss_pred hhhhhhhcC---CCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 668 IDALSRMVD---PSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 668 ~~~~~~~~~---~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
......... +...........+++.+++.+|++.+|++||++.+++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~ 284 (294)
T PLN00009 234 LPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEH 284 (294)
T ss_pred chhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000000000 000000111234568899999999999999999999864
No 313
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=9.8e-35 Score=304.63 Aligned_cols=244 Identities=24% Similarity=0.325 Sum_probs=192.6
Q ss_pred CCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEeeCCCC
Q 004994 445 GNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDYGGNC 523 (720)
Q Consensus 445 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~g 523 (720)
...||+|+||.||++.. .+++.||+|.+.... ....+.+.+|+.+++.++||||+++++++...+..++||||++++
T Consensus 26 ~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~ 103 (297)
T cd06659 26 YIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRK--QQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGG 103 (297)
T ss_pred hhhcCCCCceeEEEEEEcCCCCEEEEEEEEecc--cchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCC
Confidence 45799999999999965 578999999986432 234567889999999999999999999999999999999999999
Q ss_pred CHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCCCccc
Q 004994 524 TLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNEL 603 (720)
Q Consensus 524 sL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~~~ 603 (720)
+|.+++.. ..+++..+..++.+++.||+|||+. +++||||||+||+++.++.+||+|||++........ .
T Consensus 104 ~L~~~~~~-----~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~--~ 173 (297)
T cd06659 104 ALTDIVSQ-----TRLNEEQIATVCESVLQALCYLHSQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVP--K 173 (297)
T ss_pred CHHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHeEEccCCcEEEeechhHhhcccccc--c
Confidence 99987742 4578899999999999999999987 899999999999999999999999999875532211 1
Q ss_pred ccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcCCCCCch
Q 004994 604 SEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDGA 682 (720)
Q Consensus 604 ~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 682 (720)
.....++..|+|||+. ...++.++|||||||++|||++|+.||............. . ...+...
T Consensus 174 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~---~----------~~~~~~~-- 238 (297)
T cd06659 174 RKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLR---D----------SPPPKLK-- 238 (297)
T ss_pred ccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHh---c----------cCCCCcc--
Confidence 2234578899999988 4578999999999999999999999996433211110000 0 0000000
Q ss_pred hhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 683 YLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 683 ~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
........+.+++.+||+.+|++||+++|++++
T Consensus 239 ~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~ 271 (297)
T cd06659 239 NAHKISPVLRDFLERMLTREPQERATAQELLDH 271 (297)
T ss_pred ccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 011223567899999999999999999999984
No 314
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1e-34 Score=324.82 Aligned_cols=274 Identities=14% Similarity=0.199 Sum_probs=186.8
Q ss_pred HHhcCCCCCCeeccCCCceEEEEEeC--CCcEEEEEEe--------------ccc-ccccccHHHHHHHHHHHHccCCCc
Q 004994 437 QYTNSFSEGNFIGEGLLGSVYKAELP--GGKLLAVKKL--------------SNT-VSQRQTDEEFLELASTISRLRHGN 499 (720)
Q Consensus 437 ~~~~~~~~~~~lg~G~~g~Vy~~~~~--~g~~vavK~l--------------~~~-~~~~~~~~~~~~e~~~l~~l~H~n 499 (720)
.+.++|...+.||+|+||+||++... ++..+++|.+ .+. .........+.+|++++++++|||
T Consensus 145 ~~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~Hpn 224 (501)
T PHA03210 145 EFLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHEN 224 (501)
T ss_pred hhhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCC
Confidence 45678999999999999999998543 2322333211 111 111223456889999999999999
Q ss_pred eeEEEeEeccCCeEEEEEeeCCCCCHHHHhhccch-hccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEE
Q 004994 500 IVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEE-AHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILL 578 (720)
Q Consensus 500 iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~-~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl 578 (720)
||++++++.+.+..|+|+|++.. ++.+++..... ............++.|++.||.|||+. +||||||||+|||+
T Consensus 225 Iv~l~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~---gIiHrDLKP~NILl 300 (501)
T PHA03210 225 ILKIEEILRSEANTYMITQKYDF-DLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDK---KLIHRDIKLENIFL 300 (501)
T ss_pred cCcEeEEEEECCeeEEEEecccc-CHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEE
Confidence 99999999999999999999864 66666643211 112233456678999999999999987 99999999999999
Q ss_pred cCCCCeEEccccCCCCCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCC-CCCCCCccccc
Q 004994 579 DEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKP-YDRSRPRGEQS 656 (720)
Q Consensus 579 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~P-f~~~~~~~~~~ 656 (720)
+.++.+||+|||+++.+..... .......++..|+|||.+ ...++.++|||||||++|||++|..+ +..........
T Consensus 301 ~~~~~vkL~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~ 379 (501)
T PHA03210 301 NCDGKIVLGDFGTAMPFEKERE-AFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQ 379 (501)
T ss_pred CCCCCEEEEeCCCceecCcccc-cccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHH
Confidence 9999999999999987643221 222345688999999998 45699999999999999999998754 43322111111
Q ss_pred hhhhc------ccccCch-hhhhhhcCCC--------CCchh-hHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 657 LVRWA------IPRLHDI-DALSRMVDPS--------LDGAY-LAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 657 ~~~~~------~~~~~~~-~~~~~~~~~~--------~~~~~-~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
+.+.. ...+.+. ..+...++.. +.... .......+.+++.+||+.||.+|||+.|++++
T Consensus 380 ~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~h 454 (501)
T PHA03210 380 LLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLAL 454 (501)
T ss_pred HHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 11100 0000000 0011111100 00000 00123457788999999999999999999875
No 315
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-34 Score=287.76 Aligned_cols=268 Identities=21% Similarity=0.287 Sum_probs=219.1
Q ss_pred CHHHHHHHhcCCCCCCeeccCCCceEEEEEeC------CCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEE
Q 004994 431 TIASLQQYTNSFSEGNFIGEGLLGSVYKAELP------GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELI 504 (720)
Q Consensus 431 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~ 504 (720)
..+++.....+++...++.+|.||+||+|.+. +.+.|-+|.++...+ ......+..|.-.+..+.|||+..+.
T Consensus 275 r~~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS-~iQv~~~L~es~lly~~sH~nll~V~ 353 (563)
T KOG1024|consen 275 RLQELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHAS-QIQVNLLLQESMLLYGASHPNLLSVL 353 (563)
T ss_pred hHHhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhccc-HHHHHHHHHHHHHHhcCcCCCcccee
Confidence 35566667777888899999999999999543 345677888875543 33446678888888999999999999
Q ss_pred eEecc-CCeEEEEEeeCCCCCHHHHhhcc----chhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEc
Q 004994 505 GYCNE-HGQHLLVYDYGGNCTLHDLLHSD----EEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLD 579 (720)
Q Consensus 505 ~~~~~-~~~~~lv~e~~~~gsL~~~l~~~----~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~ 579 (720)
+++.+ ....+.+|.++.-|+|..++.-. ....+.++-.+...++.|++.|++|||.. +|||.||.++|++||
T Consensus 354 ~V~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~---~ViHkDiAaRNCvId 430 (563)
T KOG1024|consen 354 GVSIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNH---GVIHKDIAARNCVID 430 (563)
T ss_pred EEEeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhc---Ccccchhhhhcceeh
Confidence 98865 56789999999999999999721 23356677888999999999999999987 999999999999999
Q ss_pred CCCCeEEccccCCCCCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccch
Q 004994 580 EKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSL 657 (720)
Q Consensus 580 ~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~ 657 (720)
+..++||+|-.+++.+.+.+++.....-.....||+||.+ ...|+.++|||||||+||||+| |+.||.+.++.+..
T Consensus 431 d~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~-- 508 (563)
T KOG1024|consen 431 DQLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEME-- 508 (563)
T ss_pred hheeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHH--
Confidence 9999999999999999998887766666667789999998 5679999999999999999999 99999765543322
Q ss_pred hhhcccccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 658 VRWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 658 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
.++.....-..+-.+++++..++..||..+|++||+++++++-|.+.
T Consensus 509 ---------------~ylkdGyRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF 555 (563)
T KOG1024|consen 509 ---------------HYLKDGYRLAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEF 555 (563)
T ss_pred ---------------HHHhccceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHH
Confidence 22222222234456778999999999999999999999999998764
No 316
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=2.1e-34 Score=300.25 Aligned_cols=266 Identities=23% Similarity=0.300 Sum_probs=197.3
Q ss_pred CCCCCeeccCCCceEEEEEeC-CCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccC--CeEEEEEe
Q 004994 442 FSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEH--GQHLLVYD 518 (720)
Q Consensus 442 ~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~--~~~~lv~e 518 (720)
|...+.||+|+||.||+|... +++.||+|++............+.+|++++++++|+|++++++++.+. +..++|||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 456788999999999999664 589999999986543344556788999999999999999999999887 89999999
Q ss_pred eCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCC
Q 004994 519 YGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSG 598 (720)
Q Consensus 519 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~ 598 (720)
|+++ +|.+++... ...+++.....++.++++||+|||+. +++|+||||+||++++++.+||+|||++......
T Consensus 81 ~~~~-~l~~~~~~~---~~~~~~~~~~~i~~~i~~al~~LH~~---~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~ 153 (287)
T cd07840 81 YMDH-DLTGLLDSP---EVKFTESQIKCYMKQLLEGLQYLHSN---GILHRDIKGSNILINNDGVLKLADFGLARPYTKR 153 (287)
T ss_pred cccc-cHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEEcCCCCEEEccccceeeccCC
Confidence 9985 888887532 24688999999999999999999987 8999999999999999999999999999876443
Q ss_pred CCcccccCccccccCCCCccCC--CCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhccccc--Cchhhhhh-
Q 004994 599 STNELSEGLLTAHGSGAPEFES--GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRL--HDIDALSR- 673 (720)
Q Consensus 599 ~~~~~~~~~~~~~~~~aPE~~~--~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~- 673 (720)
... ......++..|+|||... ..++.++||||||+++|||+||+.||...........+....... ........
T Consensus 154 ~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (287)
T cd07840 154 NSA-DYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKL 232 (287)
T ss_pred Ccc-cccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccc
Confidence 211 112234567899999763 357899999999999999999999997644321111110000000 00000000
Q ss_pred ----------hcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 674 ----------MVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 674 ----------~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.....+.......++.++.+++.+||+.+|++||++++++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 284 (287)
T cd07840 233 PWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQH 284 (287)
T ss_pred hhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 000000011111125678899999999999999999999874
No 317
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=4.2e-34 Score=301.74 Aligned_cols=269 Identities=20% Similarity=0.304 Sum_probs=194.1
Q ss_pred cCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCC-------
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHG------- 511 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~------- 511 (720)
++|+..+.||+|+||.||+|.. .+++.||||.+............+.+|++++++++||||++++++|...+
T Consensus 12 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 91 (310)
T cd07865 12 SKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYK 91 (310)
T ss_pred hheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCC
Confidence 4688889999999999999965 46899999998654333344456678999999999999999999986543
Q ss_pred -eEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEcccc
Q 004994 512 -QHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCG 590 (720)
Q Consensus 512 -~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFG 590 (720)
..++||||+.+ +|.+.+... ...+++.....++.|+++||+|||+. +++|+||||+||+++.++.+||+|||
T Consensus 92 ~~~~lv~e~~~~-~l~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg 164 (310)
T cd07865 92 GSFYLVFEFCEH-DLAGLLSNK---NVKFTLSEIKKVMKMLLNGLYYIHRN---KILHRDMKAANILITKDGILKLADFG 164 (310)
T ss_pred ceEEEEEcCCCc-CHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEECCCCcEEECcCC
Confidence 45999999975 787777432 24688999999999999999999987 89999999999999999999999999
Q ss_pred CCCCCCCCCCc--ccccCccccccCCCCccCCC--CCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhccc---
Q 004994 591 LAPLLFSGSTN--ELSEGLLTAHGSGAPEFESG--SYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIP--- 663 (720)
Q Consensus 591 la~~~~~~~~~--~~~~~~~~~~~~~aPE~~~~--~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~--- 663 (720)
++......... .......++..|+|||...+ .++.++||||||+++|||+||+.||...........+.....
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (310)
T cd07865 165 LARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSIT 244 (310)
T ss_pred CcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC
Confidence 99766432211 11123345778999998743 378899999999999999999999975443221111111110
Q ss_pred -----ccCchhhhhhhcCCCCC-chhh-----HHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 664 -----RLHDIDALSRMVDPSLD-GAYL-----AKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 664 -----~~~~~~~~~~~~~~~~~-~~~~-----~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.....+.......+... .... ......+.+++.+||+.||++|||++|++++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h 307 (310)
T cd07865 245 PEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNH 307 (310)
T ss_pred hhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcC
Confidence 00000000000000000 0000 0012456799999999999999999999875
No 318
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=3.9e-34 Score=298.06 Aligned_cols=267 Identities=20% Similarity=0.323 Sum_probs=197.1
Q ss_pred CCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEee
Q 004994 441 SFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDY 519 (720)
Q Consensus 441 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 519 (720)
+|+..+.||+|++|.||+|.. .+|+.||||++..... ....+.+.+|++++++++|+||+++++++.+.+..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 79 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAE-EGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEY 79 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEeccccc-ccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEec
Confidence 477789999999999999976 4689999999975432 23345677899999999999999999999999999999999
Q ss_pred CCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCC
Q 004994 520 GGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGS 599 (720)
Q Consensus 520 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~ 599 (720)
+++ +|.+++.... ....+++.....++.++++||+|||+. +++||||||+||++++++.+||+|||+++......
T Consensus 80 ~~~-~l~~~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~ 154 (284)
T cd07836 80 MDK-DLKKYMDTHG-VRGALDPNTVKSFTYQLLKGIAFCHEN---RVLHRDLKPQNLLINKRGELKLADFGLARAFGIPV 154 (284)
T ss_pred CCc-cHHHHHHhcC-CCCCcCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCc
Confidence 985 8888775432 134689999999999999999999987 89999999999999999999999999997653221
Q ss_pred CcccccCccccccCCCCccCCC--CCCCccchHhHHHHHHHHHhCCCCCCCCCCccccc-hhhhc-ccccCchhhhh---
Q 004994 600 TNELSEGLLTAHGSGAPEFESG--SYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQS-LVRWA-IPRLHDIDALS--- 672 (720)
Q Consensus 600 ~~~~~~~~~~~~~~~aPE~~~~--~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~-~~~~~-~~~~~~~~~~~--- 672 (720)
. ......++..|++||...+ .++.++|||||||++|||++|+.||.......... +.+.. .+.......+.
T Consensus 155 ~--~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (284)
T cd07836 155 N--TFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLP 232 (284)
T ss_pred c--ccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCc
Confidence 1 1122345778999998733 47889999999999999999999997544321111 11100 00000000000
Q ss_pred ---hhcCCCCC---chhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 673 ---RMVDPSLD---GAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 673 ---~~~~~~~~---~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
........ .......+..+.+++.+|++.||++||+++|++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~ 281 (284)
T cd07836 233 EYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQH 281 (284)
T ss_pred hhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 00000000 01112234678899999999999999999999864
No 319
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=3.9e-34 Score=298.27 Aligned_cols=248 Identities=24% Similarity=0.353 Sum_probs=195.2
Q ss_pred CCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEee
Q 004994 441 SFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDY 519 (720)
Q Consensus 441 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 519 (720)
.|...+.||+|++|.||++.. .+++.||+|++... .....+.+.+|+.+++.++||||+++++++...++.++|+||
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~--~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~ 97 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLR--KQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEF 97 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEecc--chhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEec
Confidence 344457899999999999965 57889999998532 223345688999999999999999999999999999999999
Q ss_pred CCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCC
Q 004994 520 GGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGS 599 (720)
Q Consensus 520 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~ 599 (720)
+++++|.+++.. ..+++..+..++.+++.||+|||+. +++||||||+||+++.++.++|+|||++.......
T Consensus 98 ~~~~~L~~~~~~-----~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~ 169 (285)
T cd06648 98 LEGGALTDIVTH-----TRMNEEQIATVCLAVLKALSFLHAQ---GVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEV 169 (285)
T ss_pred cCCCCHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChhhEEEcCCCcEEEcccccchhhccCC
Confidence 999999998853 3578889999999999999999987 89999999999999999999999999887653221
Q ss_pred CcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcCCC
Q 004994 600 TNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPS 678 (720)
Q Consensus 600 ~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (720)
. ......++..|+|||.. ...++.++|||||||++|||++|+.||....+....... .....+.
T Consensus 170 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~-------------~~~~~~~ 234 (285)
T cd06648 170 P--RRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRI-------------RDNLPPK 234 (285)
T ss_pred c--ccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHH-------------HhcCCCC
Confidence 1 12234577899999998 456899999999999999999999999653321111100 0000111
Q ss_pred CCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 679 LDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 679 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.. .....+..+.+++.+||+.+|++|||+.+++++
T Consensus 235 ~~--~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~ 269 (285)
T cd06648 235 LK--NLHKVSPRLRSFLDRMLVRDPAQRATAAELLNH 269 (285)
T ss_pred Cc--ccccCCHHHHHHHHHHcccChhhCcCHHHHccC
Confidence 11 011234578899999999999999999999863
No 320
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=8.9e-34 Score=289.13 Aligned_cols=249 Identities=26% Similarity=0.408 Sum_probs=199.4
Q ss_pred CCCCCCeeccCCCceEEEEEeC-CCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEee
Q 004994 441 SFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDY 519 (720)
Q Consensus 441 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 519 (720)
+|...+.||+|++|.||++... +++.+++|++..... .....+.+|++++++++|+||+++++++...+..++++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~ 78 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK--EKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEF 78 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch--hHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEec
Confidence 4677789999999999999764 789999999975432 3557889999999999999999999999999999999999
Q ss_pred CCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCC
Q 004994 520 GGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGS 599 (720)
Q Consensus 520 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~ 599 (720)
+++++|.+++... ...+++..+..++.++++||.|||.. +++||||+|+||++++++.++|+|||.+.......
T Consensus 79 ~~~~~L~~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~ 152 (253)
T cd05122 79 CSGGSLKDLLKST---NQTLTESQIAYVCKELLKGLEYLHSN---GIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTK 152 (253)
T ss_pred CCCCcHHHHHhhc---CCCCCHHHHHHHHHHHHHHHHHhhcC---CEecCCCCHHHEEEccCCeEEEeeccccccccccc
Confidence 9999999998543 25689999999999999999999986 89999999999999999999999999998764432
Q ss_pred CcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcCCC
Q 004994 600 TNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPS 678 (720)
Q Consensus 600 ~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (720)
. .....++..|++||+. ...++.++||||||+++|||++|+.||............. ....+.
T Consensus 153 ~---~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~-------------~~~~~~ 216 (253)
T cd05122 153 A---RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIA-------------TNGPPG 216 (253)
T ss_pred c---ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHH-------------hcCCCC
Confidence 1 2335577889999988 4568899999999999999999999997543211110000 000000
Q ss_pred CCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 679 LDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 679 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.. .....+..+.+++.+||+.||++|||+.|++++
T Consensus 217 ~~--~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~ 251 (253)
T cd05122 217 LR--NPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKH 251 (253)
T ss_pred cC--cccccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 00 011124578899999999999999999999874
No 321
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=3.8e-34 Score=300.98 Aligned_cols=270 Identities=24% Similarity=0.311 Sum_probs=197.7
Q ss_pred HHhcCCCCCCeeccCCCceEEEEEeC-CCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCC----
Q 004994 437 QYTNSFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHG---- 511 (720)
Q Consensus 437 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~---- 511 (720)
...++|+..+.||+|+||.||+|... +|+.||+|+++...........+.+|++++++++||||+++++++.+..
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 34578888999999999999999764 6899999999754433444567788999999999999999999987654
Q ss_pred ------eEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeE
Q 004994 512 ------QHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVR 585 (720)
Q Consensus 512 ------~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~k 585 (720)
..++|+||+++ ++.+.+... ...+++.....++.+++.||+|||+. +|+||||||+||++++++.+|
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~k 156 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGLLESG---LVHFSEDHIKSFMKQLLEGLNYCHKK---NFLHRDIKCSNILLNNKGQIK 156 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCcEE
Confidence 78999999986 676666432 34689999999999999999999987 999999999999999999999
Q ss_pred EccccCCCCCCCCCCcccccCccccccCCCCccCC--CCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhccc
Q 004994 586 VSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFES--GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIP 663 (720)
Q Consensus 586 l~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~--~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~ 663 (720)
|+|||++........ ........+..|+|||... ..++.++|||||||++|||++|+.||...........+.....
T Consensus 157 l~dfg~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~ 235 (302)
T cd07864 157 LADFGLARLYNSEES-RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCG 235 (302)
T ss_pred eCcccccccccCCcc-cccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhC
Confidence 999999987643321 1112233466899999873 3478899999999999999999999975432211111110000
Q ss_pred c-----cCchhhhhhh--cCC------CCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 664 R-----LHDIDALSRM--VDP------SLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 664 ~-----~~~~~~~~~~--~~~------~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
. ..+....... .++ ... ......+..+.+++.+||+.||++||++++++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 299 (302)
T cd07864 236 SPCPAVWPDVIKLPYFNTMKPKKQYRRRLR-EEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNS 299 (302)
T ss_pred CCChhhcccccccccccccccccccccchh-hhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 0 0000000000 000 000 0011234678899999999999999999999864
No 322
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=1.4e-34 Score=308.92 Aligned_cols=269 Identities=21% Similarity=0.321 Sum_probs=198.2
Q ss_pred hcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEecc----CCeE
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNE----HGQH 513 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~----~~~~ 513 (720)
.++|+..+.||+|+||.||+|.. .+|+.||+|++............+.+|+.++++++||||+++++++.. ....
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV 83 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence 36788889999999999999954 569999999997654333455677889999999999999999998753 3468
Q ss_pred EEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCC
Q 004994 514 LLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAP 593 (720)
Q Consensus 514 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~ 593 (720)
++||||+. ++|.+++.. ...+++.....++.++++||+|||+. +|+||||||+||++++++.+||+|||+++
T Consensus 84 ~lv~e~~~-~~l~~~~~~----~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~dfg~~~ 155 (334)
T cd07855 84 YVVMDLME-SDLHHIIHS----DQPLTEEHIRYFLYQLLRGLKYIHSA---NVIHRDLKPSNLLVNEDCELRIGDFGMAR 155 (334)
T ss_pred EEEEehhh-hhHHHHhcc----CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEecccccce
Confidence 99999996 588888753 24588999999999999999999987 89999999999999999999999999997
Q ss_pred CCCCCCCc--ccccCccccccCCCCccCC--CCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccc----c
Q 004994 594 LLFSGSTN--ELSEGLLTAHGSGAPEFES--GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPR----L 665 (720)
Q Consensus 594 ~~~~~~~~--~~~~~~~~~~~~~aPE~~~--~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~----~ 665 (720)
........ .......++..|+|||.+. ..++.++|||||||++|||++|+.||...........+...... +
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~ 235 (334)
T cd07855 156 GLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEV 235 (334)
T ss_pred eecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHh
Confidence 65332211 1122346778899999873 35899999999999999999999999654321111000000000 0
Q ss_pred Cc---hhhhhhhcC---CCCC---chhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 666 HD---IDALSRMVD---PSLD---GAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 666 ~~---~~~~~~~~~---~~~~---~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.+ .+...+..+ .... .......+.++.+++.+||+.+|++|||+++++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 294 (334)
T cd07855 236 LNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQH 294 (334)
T ss_pred hhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 00 000000000 0000 00112235678999999999999999999999875
No 323
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-35 Score=309.25 Aligned_cols=249 Identities=22% Similarity=0.351 Sum_probs=198.7
Q ss_pred CCCCCeeccCCCceEEEEEeC-CCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEeeC
Q 004994 442 FSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDYG 520 (720)
Q Consensus 442 ~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 520 (720)
|.+..-||.|+||+||+|..+ ++-..|.|++.- ......++|+-|+++|..++||+||++++.|...+.++++.|||
T Consensus 34 WeIiGELGDGAFGKVyKA~nket~~lAAaKvIet--kseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC 111 (1187)
T KOG0579|consen 34 WEIIGELGDGAFGKVYKAVNKETKLLAAAKVIET--KSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFC 111 (1187)
T ss_pred HHHHhhhcCccchhhhhhhcccchhhhhhhhhcc--cchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeec
Confidence 444567999999999999554 455567777742 22445678999999999999999999999888888999999999
Q ss_pred CCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCCC
Q 004994 521 GNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGST 600 (720)
Q Consensus 521 ~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~~ 600 (720)
+||-...++.. ..+.+...++..++.+++.||.|||+. +|||||||+-|||++-+|.++|+|||++-... .+
T Consensus 112 ~GGAVDaimlE---L~r~LtE~QIqvvc~q~ldALn~LHs~---~iIHRDLKAGNiL~TldGdirLADFGVSAKn~--~t 183 (1187)
T KOG0579|consen 112 GGGAVDAIMLE---LGRVLTEDQIQVVCYQVLDALNWLHSQ---NIIHRDLKAGNILLTLDGDIRLADFGVSAKNK--ST 183 (1187)
T ss_pred CCchHhHHHHH---hccccchHHHHHHHHHHHHHHHHHhhc---chhhhhccccceEEEecCcEeeecccccccch--hH
Confidence 99999888753 456788999999999999999999997 99999999999999999999999999975431 22
Q ss_pred cccccCccccccCCCCccC------CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhh
Q 004994 601 NELSEGLLTAHGSGAPEFE------SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRM 674 (720)
Q Consensus 601 ~~~~~~~~~~~~~~aPE~~------~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (720)
......++||++|||||+. ..+|+.++||||||+.|.||..+.+|.....+.. .++.... -
T Consensus 184 ~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMR--VllKiaK-----------S 250 (1187)
T KOG0579|consen 184 RQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMR--VLLKIAK-----------S 250 (1187)
T ss_pred HhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHH--HHHHHhh-----------c
Confidence 3344568999999999975 3469999999999999999999999976543211 1111100 0
Q ss_pred cCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 675 VDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 675 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
-.|.+ ..+..+...|.|++.+||.++|..||++.++++|
T Consensus 251 ePPTL--lqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~H 289 (1187)
T KOG0579|consen 251 EPPTL--LQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKH 289 (1187)
T ss_pred CCCcc--cCcchhhhHHHHHHHHHHhcCCccCCCHHHHhhC
Confidence 01221 1344566789999999999999999999999975
No 324
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=1.4e-34 Score=297.03 Aligned_cols=249 Identities=25% Similarity=0.292 Sum_probs=198.1
Q ss_pred CCCCCCeeccCCCceEEEEEeC-CCcEEEEEEeccccc-ccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEe
Q 004994 441 SFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVS-QRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYD 518 (720)
Q Consensus 441 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 518 (720)
+|...+.||+|+||.||+|... +++.||+|.+.+... .....+.+.+|++++++++||||+++++++.+....++|+|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 4677789999999999999664 689999999975432 22445788999999999999999999999999999999999
Q ss_pred eCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCC
Q 004994 519 YGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSG 598 (720)
Q Consensus 519 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~ 598 (720)
|+.+++|.+++... ..+++.....++.++++||.|||+. +++|+||||+||++++++.++|+|||++......
T Consensus 81 ~~~~~~L~~~l~~~----~~l~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~ 153 (258)
T cd05578 81 LLLGGDLRYHLSQK----VKFSEEQVKFWICEIVLALEYLHSK---GIIHRDIKPDNILLDEQGHVHITDFNIATKVTPD 153 (258)
T ss_pred CCCCCCHHHHHHhc----CCcCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEEcCCCCEEEeecccccccCCC
Confidence 99999999988532 4688899999999999999999987 8999999999999999999999999998766433
Q ss_pred CCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcCC
Q 004994 599 STNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDP 677 (720)
Q Consensus 599 ~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (720)
. ......++..|+|||.. ...++.++|+||||+++|+|++|+.||............. ....
T Consensus 154 ~---~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~--------------~~~~ 216 (258)
T cd05578 154 T---LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRA--------------KQET 216 (258)
T ss_pred c---cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHH--------------Hhcc
Confidence 2 12234567789999988 4457999999999999999999999997544221111110 0000
Q ss_pred CCCchhhHHHHHHHHHHHHHHhccCCCCCCCH--HHHHH
Q 004994 678 SLDGAYLAKSLSRFADIISRCVQWEPGFRPPM--SEIVQ 714 (720)
Q Consensus 678 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~--~evl~ 714 (720)
.....+...+..+.+++.+||+.||.+||++ +|+++
T Consensus 217 -~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~ 254 (258)
T cd05578 217 -ADVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLKN 254 (258)
T ss_pred -ccccCcccCcHHHHHHHHHHccCChhHcCCccHHHHhc
Confidence 0011122334678899999999999999999 77654
No 325
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=5.5e-34 Score=291.90 Aligned_cols=253 Identities=25% Similarity=0.404 Sum_probs=202.5
Q ss_pred CCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEee
Q 004994 441 SFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDY 519 (720)
Q Consensus 441 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 519 (720)
+|...+.||+|+||.||++.. .+++.||+|++..........+.+.+|+++++.++|+|++++++.+...+..++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~ 80 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY 80 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence 466778999999999999965 4689999999975544445567789999999999999999999999988999999999
Q ss_pred CCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCC
Q 004994 520 GGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGS 599 (720)
Q Consensus 520 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~ 599 (720)
+++++|.+++.........+++.....++.++++||.|||+. +++|+||+|+||++++++.++|+|||.+.......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~---~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~ 157 (258)
T cd08215 81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSR---KILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV 157 (258)
T ss_pred cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHHeEEcCCCcEEECCccceeecccCc
Confidence 999999999865432346789999999999999999999987 99999999999999999999999999997664332
Q ss_pred CcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcCCC
Q 004994 600 TNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPS 678 (720)
Q Consensus 600 ~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (720)
.......++..|+|||.. ...++.++||||+|+++++|++|+.||....... ..... ..... +.
T Consensus 158 --~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~---~~~~~---------~~~~~-~~ 222 (258)
T cd08215 158 --DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLE---LALKI---------LKGQY-PP 222 (258)
T ss_pred --ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHH---HHHHH---------hcCCC-CC
Confidence 122334567889999987 5568899999999999999999999996543111 00000 00000 01
Q ss_pred CCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 679 LDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 679 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
+ +.....++.+++.+||..+|++|||+.|++++
T Consensus 223 ~----~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 255 (258)
T cd08215 223 I----PSQYSSELRNLVSSLLQKDPEERPSIAQILQS 255 (258)
T ss_pred C----CCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 1 11233568899999999999999999999874
No 326
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=1.7e-34 Score=308.34 Aligned_cols=266 Identities=19% Similarity=0.316 Sum_probs=195.1
Q ss_pred hcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccC-----Ce
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEH-----GQ 512 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~-----~~ 512 (720)
.++|...+.||+|+||.||+|.. .+|+.||+|++.... .......+.+|+.++++++|+||+++++++... ..
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 82 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFE-HQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFND 82 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccc-cchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccce
Confidence 46788999999999999999954 578999999986422 233456688899999999999999999987543 35
Q ss_pred EEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCC
Q 004994 513 HLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLA 592 (720)
Q Consensus 513 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla 592 (720)
.++|+||+++ ++.+++.. ..+++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 83 ~~lv~e~~~~-~l~~~~~~-----~~l~~~~~~~i~~ql~~aL~~LH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~ 153 (336)
T cd07849 83 VYIVQELMET-DLYKLIKT-----QHLSNDHIQYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTNCDLKICDFGLA 153 (336)
T ss_pred EEEEehhccc-CHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEECcccce
Confidence 7999999985 77776642 4588899999999999999999987 8999999999999999999999999999
Q ss_pred CCCCCCCCc-ccccCccccccCCCCccC-C-CCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchh
Q 004994 593 PLLFSGSTN-ELSEGLLTAHGSGAPEFE-S-GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDID 669 (720)
Q Consensus 593 ~~~~~~~~~-~~~~~~~~~~~~~aPE~~-~-~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 669 (720)
+........ .......++..|+|||.. . ..++.++|||||||++|||++|+.||...+............. ....+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~-~~~~~ 232 (336)
T cd07849 154 RIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLG-TPSQE 232 (336)
T ss_pred eeccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcC-CCCHH
Confidence 765432211 112234578889999976 3 4588999999999999999999999965432111000000000 00001
Q ss_pred hhhhhcCCC-------------CCc-hhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 670 ALSRMVDPS-------------LDG-AYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 670 ~~~~~~~~~-------------~~~-~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
....+.+.. ... ........++.+++.+||+.||++|||+.|++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h 292 (336)
T cd07849 233 DLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH 292 (336)
T ss_pred HHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 111111100 000 0011224568899999999999999999999976
No 327
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5e-36 Score=337.13 Aligned_cols=256 Identities=27% Similarity=0.401 Sum_probs=203.0
Q ss_pred HHhcCCCCCCeeccCCCceEEEE-EeCCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEE
Q 004994 437 QYTNSFSEGNFIGEGLLGSVYKA-ELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLL 515 (720)
Q Consensus 437 ~~~~~~~~~~~lg~G~~g~Vy~~-~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~l 515 (720)
..+-++..+.+||.|.||.||-| ..++|...|+|.++-........+...+|+.++..++|||+|++||+=.+.+..+|
T Consensus 1232 nV~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~I 1311 (1509)
T KOG4645|consen 1232 NVTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYI 1311 (1509)
T ss_pred cceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHH
Confidence 34567888899999999999999 56789999999987443335555678899999999999999999999999999999
Q ss_pred EEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCC
Q 004994 516 VYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLL 595 (720)
Q Consensus 516 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~ 595 (720)
-||||.+|+|.+++... .-.++.....+..|++.|++|||+. +||||||||.||+||.+|.+|++|||.|..+
T Consensus 1312 FMEyC~~GsLa~ll~~g----ri~dE~vt~vyt~qll~gla~LH~~---gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki 1384 (1509)
T KOG4645|consen 1312 FMEYCEGGSLASLLEHG----RIEDEMVTRVYTKQLLEGLAYLHEH---GIVHRDIKPANILLDFNGLIKYGDFGSAVKI 1384 (1509)
T ss_pred HHHHhccCcHHHHHHhc----chhhhhHHHHHHHHHHHHHHHHHhc---CceecCCCccceeeecCCcEEeecccceeEe
Confidence 99999999999999543 2344555666788999999999997 9999999999999999999999999999877
Q ss_pred CCCCCc--ccccCccccccCCCCccCCCC----CCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchh
Q 004994 596 FSGSTN--ELSEGLLTAHGSGAPEFESGS----YSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDID 669 (720)
Q Consensus 596 ~~~~~~--~~~~~~~~~~~~~aPE~~~~~----~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 669 (720)
...... ..-....||+.|||||.++|. -..+.||||+|||+.||+||+.||...+.. |.+
T Consensus 1385 ~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne-------~aI------- 1450 (1509)
T KOG4645|consen 1385 KNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNE-------WAI------- 1450 (1509)
T ss_pred cCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccch-------hHH-------
Confidence 543211 112356799999999999653 345899999999999999999999754321 111
Q ss_pred hhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 670 ALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 670 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
+-.+ ...-....+....++-.+++.+||+.||++|.++.|++++
T Consensus 1451 -My~V-~~gh~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1451 -MYHV-AAGHKPQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred -HhHH-hccCCCCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHh
Confidence 0000 0011112334466778899999999999999999998875
No 328
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=6.6e-34 Score=292.68 Aligned_cols=244 Identities=21% Similarity=0.277 Sum_probs=193.4
Q ss_pred eccCCCceEEEEEeC-CCcEEEEEEeccccc-ccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEeeCCCCCH
Q 004994 448 IGEGLLGSVYKAELP-GGKLLAVKKLSNTVS-QRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDYGGNCTL 525 (720)
Q Consensus 448 lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL 525 (720)
||+|++|.||+|... +++.||+|++.+... .....+.+.+|++++++++||||+++++++.+....++||||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 689999999999664 589999999975432 223456789999999999999999999999999999999999999999
Q ss_pred HHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCCCccccc
Q 004994 526 HDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSE 605 (720)
Q Consensus 526 ~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~~~~~ 605 (720)
.+++... ..+++..+..++.++++||.|||+. +++|+||||+||+++.++.+||+|||+++...... ...
T Consensus 81 ~~~l~~~----~~l~~~~~~~~~~~i~~~l~~lH~~---~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~---~~~ 150 (262)
T cd05572 81 WTILRDR----GLFDEYTARFYIACVVLAFEYLHNR---GIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ---KTW 150 (262)
T ss_pred HHHHhhc----CCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc---ccc
Confidence 9998542 3478889999999999999999986 99999999999999999999999999998764332 122
Q ss_pred CccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcCCCCCchhh
Q 004994 606 GLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDGAYL 684 (720)
Q Consensus 606 ~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 684 (720)
...++..|++||.. ...++.++|+||||+++|||++|+.||....... . +....+.+......++
T Consensus 151 ~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~-------------~~~~~~~~~~~~~~~~ 216 (262)
T cd05572 151 TFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDP-M-------------EIYNDILKGNGKLEFP 216 (262)
T ss_pred cccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCH-H-------------HHHHHHhccCCCCCCC
Confidence 34567889999987 4568999999999999999999999997543211 0 0111111111111122
Q ss_pred HHHHHHHHHHHHHHhccCCCCCCC-----HHHHHHH
Q 004994 685 AKSLSRFADIISRCVQWEPGFRPP-----MSEIVQD 715 (720)
Q Consensus 685 ~~~~~~l~~l~~~cl~~dP~~RPt-----~~evl~~ 715 (720)
.....++.+++.+||+.+|++||+ ++|++++
T Consensus 217 ~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~ 252 (262)
T cd05572 217 NYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKH 252 (262)
T ss_pred cccCHHHHHHHHHHccCChhhCcCCcccCHHHHhcC
Confidence 223467899999999999999999 7888763
No 329
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=5.6e-34 Score=295.88 Aligned_cols=246 Identities=25% Similarity=0.312 Sum_probs=190.6
Q ss_pred eccCCCceEEEEEe-CCCcEEEEEEeccccc-ccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEeeCCCCCH
Q 004994 448 IGEGLLGSVYKAEL-PGGKLLAVKKLSNTVS-QRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDYGGNCTL 525 (720)
Q Consensus 448 lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL 525 (720)
||+|+||+||+|.. .+|+.||+|.+.+... .....+.+..|+++++.++||||+++++++...+..++||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 68999999999954 5789999999865322 223345678899999999999999999999999999999999999999
Q ss_pred HHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCCCccccc
Q 004994 526 HDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSE 605 (720)
Q Consensus 526 ~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~~~~~ 605 (720)
.+++.... ...+++..+..++.+++.||.|||+. +++||||+|+||++++++.+||+|||++....... ...
T Consensus 81 ~~~l~~~~--~~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~---~~~ 152 (277)
T cd05577 81 KYHIYNVG--EPGFPEARAIFYAAQIICGLEHLHQR---RIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGK---KIK 152 (277)
T ss_pred HHHHHHcC--cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEccCcchhhhccCC---ccc
Confidence 99886432 24688999999999999999999987 99999999999999999999999999987653311 122
Q ss_pred CccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcCCCCCchhh
Q 004994 606 GLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDGAYL 684 (720)
Q Consensus 606 ~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 684 (720)
...++..|+|||.. .+.++.++|||||||++|||++|+.||............. +.... .....+
T Consensus 153 ~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~-------------~~~~~-~~~~~~ 218 (277)
T cd05577 153 GRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELK-------------RRTLE-MAVEYP 218 (277)
T ss_pred cccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHH-------------hcccc-ccccCC
Confidence 34567789999987 5568999999999999999999999996543211111000 00000 000111
Q ss_pred HHHHHHHHHHHHHHhccCCCCCC-----CHHHHHHH
Q 004994 685 AKSLSRFADIISRCVQWEPGFRP-----PMSEIVQD 715 (720)
Q Consensus 685 ~~~~~~l~~l~~~cl~~dP~~RP-----t~~evl~~ 715 (720)
....+.+.+++.+||+.||++|| ++.+++++
T Consensus 219 ~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h 254 (277)
T cd05577 219 DKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREH 254 (277)
T ss_pred ccCCHHHHHHHHHHccCChhHccCCCcccHHHHHhC
Confidence 22346788999999999999999 77777653
No 330
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=6.8e-34 Score=302.71 Aligned_cols=264 Identities=22% Similarity=0.276 Sum_probs=191.1
Q ss_pred eeccC--CCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEeeCCCC
Q 004994 447 FIGEG--LLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDYGGNC 523 (720)
Q Consensus 447 ~lg~G--~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~g 523 (720)
.||+| +||+||++.. .+|+.||+|.+..........+.+.+|+.+++.++||||++++++|...+..++|+||+.++
T Consensus 5 ~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~~ 84 (328)
T cd08226 5 EIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAYG 84 (328)
T ss_pred HhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccCC
Confidence 46666 9999999965 57999999998754333344577889999999999999999999999999999999999999
Q ss_pred CHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCCC-cc
Q 004994 524 TLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGST-NE 602 (720)
Q Consensus 524 sL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~~-~~ 602 (720)
++.+++.... ...+++.....++.|++.||+|||+. +|+||||||+|||++.++.+|++||+.+........ ..
T Consensus 85 ~l~~~l~~~~--~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (328)
T cd08226 85 SANSLLKTYF--PEGMSEALIGNILFGALRGLNYLHQN---GYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAK 159 (328)
T ss_pred CHHHHHHhhc--ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCcccc
Confidence 9999886432 23578888999999999999999987 899999999999999999999999986543321110 00
Q ss_pred ----cccCccccccCCCCccCCC---CCCCccchHhHHHHHHHHHhCCCCCCCCCCcccc-chhhh------cccccCch
Q 004994 603 ----LSEGLLTAHGSGAPEFESG---SYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQ-SLVRW------AIPRLHDI 668 (720)
Q Consensus 603 ----~~~~~~~~~~~~aPE~~~~---~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~-~~~~~------~~~~~~~~ 668 (720)
......++..|++||+..+ .++.++|||||||++|||++|+.||......... ..... ........
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (328)
T cd08226 160 VVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCE 239 (328)
T ss_pred ccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchh
Confidence 0011123456999999843 4789999999999999999999999754321100 00000 00000000
Q ss_pred h-----------------hh-----hhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 669 D-----------------AL-----SRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 669 ~-----------------~~-----~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
. .. ..+.+..+...........+.+++.+||+.||++|||++|++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~ 308 (328)
T cd08226 240 ESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSH 308 (328)
T ss_pred hhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 0 00 00011111112233456788999999999999999999999865
No 331
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=3e-35 Score=284.59 Aligned_cols=272 Identities=20% Similarity=0.277 Sum_probs=200.9
Q ss_pred cCCCCCCeeccCCCceEEEEEeCC-----CcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEecc-CCeE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAELPG-----GKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNE-HGQH 513 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~~~-----g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~-~~~~ 513 (720)
..|+....||+|.||.||+|...+ .+.+|+|+++.+...........+|+.++++++||||+.+..++.+ +...
T Consensus 24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v 103 (438)
T KOG0666|consen 24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKV 103 (438)
T ss_pred HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceE
Confidence 467788999999999999994322 2379999998765555566778899999999999999999999877 6789
Q ss_pred EEEEeeCCCCCHHHHhhccc-hhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCC----CCeEEcc
Q 004994 514 LLVYDYGGNCTLHDLLHSDE-EAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEK----LIVRVSD 588 (720)
Q Consensus 514 ~lv~e~~~~gsL~~~l~~~~-~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~----~~~kl~D 588 (720)
++++||.+. +|.++++... ...+.++......|+-|+..|+.|||+. =|+||||||.|||+..+ |.|||+|
T Consensus 104 ~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~N---WvlHRDLKPaNIlvmgdgperG~VKIaD 179 (438)
T KOG0666|consen 104 WLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSN---WVLHRDLKPANILVMGDGPERGRVKIAD 179 (438)
T ss_pred EEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhh---heeeccCCcceEEEeccCCccCeeEeec
Confidence 999999987 7888876432 2235788888999999999999999997 69999999999999877 8999999
Q ss_pred ccCCCCCCCCC-CcccccCccccccCCCCccCC--CCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccc------hhh
Q 004994 589 CGLAPLLFSGS-TNELSEGLLTAHGSGAPEFES--GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQS------LVR 659 (720)
Q Consensus 589 FGla~~~~~~~-~~~~~~~~~~~~~~~aPE~~~--~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~------~~~ 659 (720)
||+|+.+...- .-.......-|.+|+|||.+- ..|+.+.||||.|||..||+|-++-|.....+-... .+.
T Consensus 180 lGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~ 259 (438)
T KOG0666|consen 180 LGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLD 259 (438)
T ss_pred ccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHH
Confidence 99999875432 122334566789999999983 469999999999999999999998886543221111 000
Q ss_pred h-----cccccCchhhhhhhcCC--------------C-CCchhhHH--HHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 660 W-----AIPRLHDIDALSRMVDP--------------S-LDGAYLAK--SLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 660 ~-----~~~~~~~~~~~~~~~~~--------------~-~~~~~~~~--~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
. ..+.-.++..+..+-+. . +...+... -.+...+|+.++|..||.+|.|+++++++
T Consensus 260 rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh 337 (438)
T KOG0666|consen 260 RIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEH 337 (438)
T ss_pred HHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhcc
Confidence 0 00111122222222111 0 00000000 11336799999999999999999999876
No 332
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=2.3e-34 Score=307.55 Aligned_cols=266 Identities=20% Similarity=0.304 Sum_probs=197.1
Q ss_pred hcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccC-----Ce
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEH-----GQ 512 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~-----~~ 512 (720)
.++|...+.||+|+||+||+|.. .+++.||||.+............+.+|+.+++.++|+||+++++++... ..
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 45788889999999999999954 5789999999875443344456778899999999999999999988643 35
Q ss_pred EEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCC
Q 004994 513 HLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLA 592 (720)
Q Consensus 513 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla 592 (720)
.++||||+. ++|.+++.. ...+++.....++.++++||.|||+. +++||||||+||+++.++.+||+|||++
T Consensus 84 ~~lv~e~~~-~~L~~~~~~----~~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~ 155 (337)
T cd07858 84 VYIVYELMD-TDLHQIIRS----SQTLSDDHCQYFLYQLLRGLKYIHSA---NVLHRDLKPSNLLLNANCDLKICDFGLA 155 (337)
T ss_pred EEEEEeCCC-CCHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECcCccc
Confidence 799999997 588888753 34688899999999999999999987 8999999999999999999999999999
Q ss_pred CCCCCCCCcccccCccccccCCCCccCC--CCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccC----
Q 004994 593 PLLFSGSTNELSEGLLTAHGSGAPEFES--GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLH---- 666 (720)
Q Consensus 593 ~~~~~~~~~~~~~~~~~~~~~~aPE~~~--~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~---- 666 (720)
+...... .......++..|+|||... ..++.++|||||||++|||++|+.||....................
T Consensus 156 ~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 233 (337)
T cd07858 156 RTTSEKG--DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDL 233 (337)
T ss_pred cccCCCc--ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHh
Confidence 8664321 1222345677899999873 4689999999999999999999999965432111110000000000
Q ss_pred ---chhhhhhhc-------CCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 667 ---DIDALSRMV-------DPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 667 ---~~~~~~~~~-------~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
......+.+ ++.... .....+.++.+++.+||+.+|++|||++|++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h 291 (337)
T cd07858 234 GFIRNEKARRYIRSLPYTPRQSFAR-LFPHANPLAIDLLEKMLVFDPSKRITVEEALAH 291 (337)
T ss_pred hhcCchhhhHHHHhcCcccccCHHH-HcccCCHHHHHHHHHHhcCChhhccCHHHHHcC
Confidence 000000000 000000 111245678899999999999999999999987
No 333
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=1.7e-33 Score=290.07 Aligned_cols=252 Identities=20% Similarity=0.277 Sum_probs=194.3
Q ss_pred cCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEeccccc---ccccHHHHHHHHHHHHccCCCceeEEEeEeccC--CeE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVS---QRQTDEEFLELASTISRLRHGNIVELIGYCNEH--GQH 513 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~--~~~ 513 (720)
.+|...+.||+|+||.||+|.. .+++.||+|.+..... .......+.+|++++++++|+||+++++++.+. +..
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 4688889999999999999964 5689999998753211 123446788999999999999999999998653 468
Q ss_pred EEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCC
Q 004994 514 LLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAP 593 (720)
Q Consensus 514 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~ 593 (720)
++++||+++++|.+++.. ...+++....+++.+++.||.|||+. +++||||||+||+++.++.++|+|||+++
T Consensus 82 ~~v~e~~~~~~L~~~~~~----~~~l~~~~~~~~~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~ 154 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKA----YGALTENVTRRYTRQILQGVSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASK 154 (264)
T ss_pred EEEEEeCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECcccccc
Confidence 899999999999998853 23477888999999999999999987 89999999999999999999999999998
Q ss_pred CCCCCCC-cccccCccccccCCCCccCC-CCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhh
Q 004994 594 LLFSGST-NELSEGLLTAHGSGAPEFES-GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDAL 671 (720)
Q Consensus 594 ~~~~~~~-~~~~~~~~~~~~~~aPE~~~-~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (720)
....... ........++..|+|||+.. ..++.++|||||||++|||++|+.||....... ..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~----------------~~ 218 (264)
T cd06653 155 RIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMA----------------AI 218 (264)
T ss_pred ccccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHH----------------HH
Confidence 6532111 11112345778899999984 458899999999999999999999996532111 01
Q ss_pred hhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 672 SRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 672 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
............+....+++.+++.+|++ +|..||++.+++.+
T Consensus 219 ~~~~~~~~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~ 261 (264)
T cd06653 219 FKIATQPTKPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRH 261 (264)
T ss_pred HHHHcCCCCCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhcC
Confidence 11111111111223344678899999999 57999999998865
No 334
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.8e-34 Score=288.16 Aligned_cols=257 Identities=25% Similarity=0.368 Sum_probs=193.3
Q ss_pred cCCCCCCeeccCCCceEEEEEeCCCcEEEEEEecccccccccHHHHHHHHHHHHc--cCCCceeEEEeEeccC-C---eE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISR--LRHGNIVELIGYCNEH-G---QH 513 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~--l~H~niv~l~~~~~~~-~---~~ 513 (720)
++....+.||+|.||+||+|++. |..||||++.. .+.+.+.+|.++.+. |+|+||+.+++.-..+ + ++
T Consensus 211 rqI~L~e~IGkGRyGEVwrG~wr-Ge~VAVKiF~s-----rdE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQL 284 (513)
T KOG2052|consen 211 RQIVLQEIIGKGRFGEVWRGRWR-GEDVAVKIFSS-----RDERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQL 284 (513)
T ss_pred heeEEEEEecCccccceeecccc-CCceEEEEecc-----cchhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEE
Confidence 44556789999999999999885 67899999963 234567777777755 5999999999876432 2 78
Q ss_pred EEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhc-----CCCCeeecCCCCCCeEEcCCCCeEEcc
Q 004994 514 LLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEV-----CEPPIVHGNFKSSNILLDEKLIVRVSD 588 (720)
Q Consensus 514 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~-----~~~~ivHrDlkp~NiLl~~~~~~kl~D 588 (720)
+||++|.++|||+|+|.. ..++....++++..+|.||++||.. ..|.|.|||||+.|||+.+++..-|+|
T Consensus 285 wLvTdYHe~GSL~DyL~r-----~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IAD 359 (513)
T KOG2052|consen 285 WLVTDYHEHGSLYDYLNR-----NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIAD 359 (513)
T ss_pred EEeeecccCCcHHHHHhh-----ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEee
Confidence 999999999999999953 5688889999999999999999974 367899999999999999999999999
Q ss_pred ccCCCCCCCCCC--cccccCccccccCCCCccCCCCCC-------CccchHhHHHHHHHHHhC----------CCCCCCC
Q 004994 589 CGLAPLLFSGST--NELSEGLLTAHGSGAPEFESGSYS-------CQSDVYSLGVVMLELLTG----------RKPYDRS 649 (720)
Q Consensus 589 FGla~~~~~~~~--~~~~~~~~~~~~~~aPE~~~~~~~-------~~~Dv~S~Gvvl~elltG----------~~Pf~~~ 649 (720)
+|+|-....... ........||..|||||++..... ..+||||||.|+||+..+ +.||.+-
T Consensus 360 LGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~ 439 (513)
T KOG2052|consen 360 LGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDV 439 (513)
T ss_pred ceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccC
Confidence 999966543321 112345679999999999854322 258999999999999863 3555432
Q ss_pred CCccccchhhhcccccCchhhhhhh-----cCCCCCc-hhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 650 RPRGEQSLVRWAIPRLHDIDALSRM-----VDPSLDG-AYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 650 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~-~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
-+.+. ..+.+.++ +.|..+. ....+++..+.++|+.||..+|.-|-|+-.+-+.|.++
T Consensus 440 Vp~DP------------s~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l 503 (513)
T KOG2052|consen 440 VPSDP------------SFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKL 503 (513)
T ss_pred CCCCC------------CHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHH
Confidence 22111 01111111 1122221 12345677889999999999999999999998888765
No 335
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=1.6e-34 Score=323.78 Aligned_cols=254 Identities=26% Similarity=0.400 Sum_probs=186.9
Q ss_pred HHHhcCCCCCCeeccCCCceEEEEEeC-CCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccC----
Q 004994 436 QQYTNSFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEH---- 510 (720)
Q Consensus 436 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~---- 510 (720)
.+..++|++.++||+||||.|||++-+ ||+.||||++.-.. .........+|++.+.+|+|||||+++..+.+.
T Consensus 475 SRY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~-s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~ 553 (1351)
T KOG1035|consen 475 SRYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA-SDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAEL 553 (1351)
T ss_pred hhHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCch-HHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcc
Confidence 456778899999999999999999654 89999999998654 344556778999999999999999976532000
Q ss_pred --------------------------------------------------------------------------------
Q 004994 511 -------------------------------------------------------------------------------- 510 (720)
Q Consensus 511 -------------------------------------------------------------------------------- 510 (720)
T Consensus 554 ~~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~t 633 (1351)
T KOG1035|consen 554 TVLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNT 633 (1351)
T ss_pred ccccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccc
Confidence
Q ss_pred -----------------------------------CeEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHH
Q 004994 511 -----------------------------------GQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARAL 555 (720)
Q Consensus 511 -----------------------------------~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L 555 (720)
-.+||-||||+...+.++++..... -......+++.+|++||
T Consensus 634 S~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~---~~~d~~wrLFreIlEGL 710 (1351)
T KOG1035|consen 634 SDSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFN---SQRDEAWRLFREILEGL 710 (1351)
T ss_pred cccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccc---hhhHHHHHHHHHHHHHH
Confidence 1246788888887777776533211 02445678999999999
Q ss_pred HHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCC----------------CCCCcccccCccccccCCCCccC
Q 004994 556 QYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLF----------------SGSTNELSEGLLTAHGSGAPEFE 619 (720)
Q Consensus 556 ~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~----------------~~~~~~~~~~~~~~~~~~aPE~~ 619 (720)
+|+|+. +||||||||.||++|++..|||+|||+|+... .+..........||.-|+|||.+
T Consensus 711 aYIH~~---giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll 787 (1351)
T KOG1035|consen 711 AYIHDQ---GIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELL 787 (1351)
T ss_pred HHHHhC---ceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHh
Confidence 999998 89999999999999999999999999998731 01111133456789999999998
Q ss_pred C--C--CCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcCCCCCch--hhHHHHHHHHH
Q 004994 620 S--G--SYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDGA--YLAKSLSRFAD 693 (720)
Q Consensus 620 ~--~--~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~ 693 (720)
. . .|+.|+|+||+|||++||+. ||...-+. ...+....++.++.. +.....+.-.+
T Consensus 788 ~~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsMER---------------a~iL~~LR~g~iP~~~~f~~~~~~~e~s 849 (1351)
T KOG1035|consen 788 SDTSSNKYNSKIDMYSLGIVLFEMLY---PFGTSMER---------------ASILTNLRKGSIPEPADFFDPEHPEEAS 849 (1351)
T ss_pred cccccccccchhhhHHHHHHHHHHhc---cCCchHHH---------------HHHHHhcccCCCCCCcccccccchHHHH
Confidence 3 2 59999999999999999995 66532111 011111122222211 22222334459
Q ss_pred HHHHHhccCCCCCCCHHHHHH
Q 004994 694 IISRCVQWEPGFRPPMSEIVQ 714 (720)
Q Consensus 694 l~~~cl~~dP~~RPt~~evl~ 714 (720)
++.++++.||.+|||+.|+|.
T Consensus 850 lI~~Ll~hdP~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 850 LIRWLLSHDPSKRPTATELLN 870 (1351)
T ss_pred HHHHHhcCCCccCCCHHHHhh
Confidence 999999999999999999985
No 336
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=3.9e-34 Score=306.28 Aligned_cols=262 Identities=19% Similarity=0.302 Sum_probs=192.8
Q ss_pred HhcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccC------
Q 004994 438 YTNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEH------ 510 (720)
Q Consensus 438 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~------ 510 (720)
..++|...+.||+|+||.||+|.. .+|+.||||++............+.+|++++++++||||+++++++...
T Consensus 13 ~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 92 (342)
T cd07879 13 LPERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEF 92 (342)
T ss_pred cccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCC
Confidence 347888899999999999999965 5789999999875443334456788999999999999999999988654
Q ss_pred CeEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEcccc
Q 004994 511 GQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCG 590 (720)
Q Consensus 511 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFG 590 (720)
...++|+||+.. +|.++. ...+++.....++.++++||+|||.. +|+||||||+||+++.++.+||+|||
T Consensus 93 ~~~~lv~e~~~~-~l~~~~------~~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dlkp~NIll~~~~~~kL~dfg 162 (342)
T cd07879 93 QDFYLVMPYMQT-DLQKIM------GHPLSEDKVQYLVYQMLCGLKYIHSA---GIIHRDLKPGNLAVNEDCELKILDFG 162 (342)
T ss_pred ceEEEEeccccc-CHHHHH------cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCC
Confidence 356899999875 666554 23578888999999999999999987 89999999999999999999999999
Q ss_pred CCCCCCCCCCcccccCccccccCCCCccCC--CCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCch
Q 004994 591 LAPLLFSGSTNELSEGLLTAHGSGAPEFES--GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDI 668 (720)
Q Consensus 591 la~~~~~~~~~~~~~~~~~~~~~~aPE~~~--~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~ 668 (720)
+++..... .....++..|+|||... ..++.++|||||||++|||++|+.||...........+....+ ....
T Consensus 163 ~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~-~~~~ 236 (342)
T cd07879 163 LARHADAE-----MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTG-VPGP 236 (342)
T ss_pred CCcCCCCC-----CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcC-CCCH
Confidence 99765321 12245677899999873 3588999999999999999999999975432111111100000 0000
Q ss_pred hhhh--------hhcC--CCC-Cchh---hHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 669 DALS--------RMVD--PSL-DGAY---LAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 669 ~~~~--------~~~~--~~~-~~~~---~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.... .... +.. .... .......+.+++.+||+.||++||+++|++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h 297 (342)
T cd07879 237 EFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEH 297 (342)
T ss_pred HHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0000 0000 000 0000 01123567899999999999999999999965
No 337
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=1.7e-33 Score=292.32 Aligned_cols=243 Identities=25% Similarity=0.304 Sum_probs=186.3
Q ss_pred eeccCCCceEEEEEe-CCCcEEEEEEecccccc-cccHHHHHHHH---HHHHccCCCceeEEEeEeccCCeEEEEEeeCC
Q 004994 447 FIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQ-RQTDEEFLELA---STISRLRHGNIVELIGYCNEHGQHLLVYDYGG 521 (720)
Q Consensus 447 ~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~-~~~~~~~~~e~---~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~ 521 (720)
+||+|+||.||+|.. .+++.||+|.+.+.... ......+..|. +.++...||||+.+++++.+.+..++||||+.
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 489999999999965 56899999998754322 12222333343 34555689999999999999999999999999
Q ss_pred CCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCCCc
Q 004994 522 NCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTN 601 (720)
Q Consensus 522 ~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~ 601 (720)
+++|.+++.. ...+++..+..++.++++||.|||+. +|+||||||+||+++.++.+||+|||+++.+....
T Consensus 81 g~~L~~~l~~----~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~-- 151 (278)
T cd05606 81 GGDLHYHLSQ----HGVFSEAEMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK-- 151 (278)
T ss_pred CCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCCCCHHHEEECCCCCEEEccCcCccccCccC--
Confidence 9999988843 34689999999999999999999987 89999999999999999999999999987653221
Q ss_pred ccccCccccccCCCCccCC-C-CCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcCCCC
Q 004994 602 ELSEGLLTAHGSGAPEFES-G-SYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSL 679 (720)
Q Consensus 602 ~~~~~~~~~~~~~aPE~~~-~-~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (720)
.....++..|+|||... + .++.++|||||||++|||++|+.||............ ......++.+
T Consensus 152 --~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~-----------~~~~~~~~~~ 218 (278)
T cd05606 152 --PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEID-----------RMTLTMAVEL 218 (278)
T ss_pred --CcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHH-----------HHhhccCCCC
Confidence 12345788999999984 3 5899999999999999999999999754322111100 0000011111
Q ss_pred CchhhHHHHHHHHHHHHHHhccCCCCCC-----CHHHHHHH
Q 004994 680 DGAYLAKSLSRFADIISRCVQWEPGFRP-----PMSEIVQD 715 (720)
Q Consensus 680 ~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~evl~~ 715 (720)
. ...+.++.+++.+|+..+|++|| +++|++++
T Consensus 219 ~----~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~ 255 (278)
T cd05606 219 P----DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEH 255 (278)
T ss_pred C----CcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhC
Confidence 1 12246788999999999999999 99999864
No 338
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=7.8e-34 Score=295.48 Aligned_cols=265 Identities=20% Similarity=0.318 Sum_probs=198.6
Q ss_pred CCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEeeC
Q 004994 442 FSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDYG 520 (720)
Q Consensus 442 ~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 520 (720)
|...+.||+|++|.||+|.. .+++.+|+|++............+.+|++++++++|+||+++++++...+..++||||+
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM 80 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence 45668899999999999965 47899999998765444345577889999999999999999999999999999999999
Q ss_pred CCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCCC
Q 004994 521 GNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGST 600 (720)
Q Consensus 521 ~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~~ 600 (720)
++ ++.+.+... ...+++..+..++.++++||.|||+. +|+|+||||+||++++++.+||+|||.+.......
T Consensus 81 ~~-~l~~~l~~~---~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~- 152 (283)
T cd05118 81 DT-DLYKLIKDR---QRGLPESLIKSYLYQLLQGLAFCHSH---GILHRDLKPENLLINTEGVLKLADFGLARSFGSPV- 152 (283)
T ss_pred CC-CHHHHHHhh---cccCCHHHHHHHHHHHHHHHHHHHHC---CeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc-
Confidence 85 888877532 24688999999999999999999987 89999999999999999999999999997764432
Q ss_pred cccccCccccccCCCCccCC-C-CCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchh-hhc-------ccccCchh-
Q 004994 601 NELSEGLLTAHGSGAPEFES-G-SYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLV-RWA-------IPRLHDID- 669 (720)
Q Consensus 601 ~~~~~~~~~~~~~~aPE~~~-~-~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~-~~~-------~~~~~~~~- 669 (720)
.......++..|+|||... . .++.++||||||+++|+|+||+.||......+....+ +.. ...+.+..
T Consensus 153 -~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (283)
T cd05118 153 -RPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLAR 231 (283)
T ss_pred -ccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhh
Confidence 1122245677899999873 3 5889999999999999999999999654322111100 000 00000000
Q ss_pred hh-hhhcCCCC--CchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 670 AL-SRMVDPSL--DGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 670 ~~-~~~~~~~~--~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.. ........ ........+.++.+++.+||+.||.+||++++++.+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~ 280 (283)
T cd05118 232 NYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAH 280 (283)
T ss_pred hhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 00 00000000 011122345789999999999999999999999874
No 339
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=2.5e-33 Score=292.30 Aligned_cols=264 Identities=22% Similarity=0.315 Sum_probs=192.6
Q ss_pred CCCCCeeccCCCceEEEEEeC-CCcEEEEEEecccccccccHHHHHHHHHHHHcc---CCCceeEEEeEeccCCe-----
Q 004994 442 FSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQRQTDEEFLELASTISRL---RHGNIVELIGYCNEHGQ----- 512 (720)
Q Consensus 442 ~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l---~H~niv~l~~~~~~~~~----- 512 (720)
|+..+.||+|+||.||+|... +++.||+|+++...........+..|+++++++ +|+||+++++++...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 456788999999999999765 589999999975443333344566677766655 69999999999987766
Q ss_pred EEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCC
Q 004994 513 HLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLA 592 (720)
Q Consensus 513 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla 592 (720)
.+++|||+.+ +|.+++.... ...+++..+..++.++++||.|||+. +++|+||+|+||++++++.+||+|||++
T Consensus 81 ~~l~~e~~~~-~l~~~l~~~~--~~~l~~~~~~~~~~~i~~al~~LH~~---~i~h~~l~~~nili~~~~~~~l~dfg~~ 154 (287)
T cd07838 81 LTLVFEHVDQ-DLATYLSKCP--KPGLPPETIKDLMRQLLRGVDFLHSH---RIVHRDLKPQNILVTSDGQVKIADFGLA 154 (287)
T ss_pred eEEEehhccc-CHHHHHHHcc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhEEEccCCCEEEeccCcc
Confidence 8999999985 7888875422 23589999999999999999999987 8999999999999999999999999999
Q ss_pred CCCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccc-hhh---------hc
Q 004994 593 PLLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQS-LVR---------WA 661 (720)
Q Consensus 593 ~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~-~~~---------~~ 661 (720)
....... ......++..|+|||.. ...++.++|||||||++|||++|+.||.......... +.+ |.
T Consensus 155 ~~~~~~~---~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (287)
T cd07838 155 RIYSFEM---ALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWP 231 (287)
T ss_pred eeccCCc---ccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcC
Confidence 7763321 11223467789999988 4568999999999999999999999997543221110 000 00
Q ss_pred ccccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 662 IPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 662 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
................. ......+....+.+++.+||+.||++||+++|++++
T Consensus 232 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~ 284 (287)
T cd07838 232 RNVSLPRSSFPSYTPRS-FKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQH 284 (287)
T ss_pred CCcccchhhcccccccc-hhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcC
Confidence 00000000000000000 011112345678899999999999999999999864
No 340
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=8.6e-34 Score=297.47 Aligned_cols=251 Identities=24% Similarity=0.381 Sum_probs=190.1
Q ss_pred cCCCCCCeeccCCCceEEEEEeCC-CcEEEEEEecccccccccHHHHHHHHHHHHcc-CCCceeEEEeEeccCCeEEEEE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAELPG-GKLLAVKKLSNTVSQRQTDEEFLELASTISRL-RHGNIVELIGYCNEHGQHLLVY 517 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~~~-g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv~ 517 (720)
++|...+.||+|+||+||+|...+ ++.||||.++.... .....++.+|++++.+. .|+||+++++++.+....++||
T Consensus 15 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~-~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~ 93 (296)
T cd06618 15 NDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGN-KEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICM 93 (296)
T ss_pred chheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCC-hHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEe
Confidence 567788999999999999997754 89999999975432 22345566677766666 4999999999999999999999
Q ss_pred eeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCC
Q 004994 518 DYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFS 597 (720)
Q Consensus 518 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~ 597 (720)
||+++ .+.++... ....+++..+.+++.++++||+|||+. ++|+||||+|+||++++++.+||+|||++..+..
T Consensus 94 e~~~~-~l~~l~~~---~~~~l~~~~~~~i~~~i~~~l~~lH~~--~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~ 167 (296)
T cd06618 94 ELMST-CLDKLLKR---IQGPIPEDILGKMTVAIVKALHYLKEK--HGVIHRDVKPSNILLDASGNVKLCDFGISGRLVD 167 (296)
T ss_pred eccCc-CHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHhh--CCEecCCCcHHHEEEcCCCCEEECccccchhccC
Confidence 99865 67766643 234788999999999999999999974 2899999999999999999999999999976643
Q ss_pred CCCcccccCccccccCCCCccCCC-----CCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhh
Q 004994 598 GSTNELSEGLLTAHGSGAPEFESG-----SYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALS 672 (720)
Q Consensus 598 ~~~~~~~~~~~~~~~~~aPE~~~~-----~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (720)
... .....++..|+|||...+ .++.++||||||+++|||++|+.||....... . .+.
T Consensus 168 ~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-~--------------~~~ 229 (296)
T cd06618 168 SKA---KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEF-E--------------VLT 229 (296)
T ss_pred CCc---ccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHH-H--------------HHH
Confidence 221 122346678999998843 37889999999999999999999996422110 0 011
Q ss_pred hhcCCCCCc-hhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 673 RMVDPSLDG-AYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 673 ~~~~~~~~~-~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
......... ........++.+++.+||+.||++||++++++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 273 (296)
T cd06618 230 KILQEEPPSLPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQH 273 (296)
T ss_pred HHhcCCCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 111100000 0000134578899999999999999999999875
No 341
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=1.8e-33 Score=287.67 Aligned_cols=249 Identities=25% Similarity=0.437 Sum_probs=199.6
Q ss_pred CCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEee
Q 004994 441 SFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDY 519 (720)
Q Consensus 441 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 519 (720)
+|+..+.||+|++|.||++.. .+++.||+|.+..........+.+.+|++++++++|+|++++++++.+.+..+++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY 80 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence 467789999999999999965 4688999999976544334567899999999999999999999999999999999999
Q ss_pred CCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCC
Q 004994 520 GGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGS 599 (720)
Q Consensus 520 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~ 599 (720)
+++++|.+++... ..+++..+..++.+++.||.|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 81 ~~~~~L~~~~~~~----~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~ 153 (254)
T cd06627 81 AENGSLRQIIKKF----GPFPESLVAVYVYQVLQGLAYLHEQ---GVIHRDIKAANILTTKDGVVKLADFGVATKLNDVS 153 (254)
T ss_pred CCCCcHHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEECCCCCEEEeccccceecCCCc
Confidence 9999999988532 5689999999999999999999987 99999999999999999999999999998764432
Q ss_pred CcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcCCC
Q 004994 600 TNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPS 678 (720)
Q Consensus 600 ~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (720)
.. .....++..|+|||.. ...++.++||||||+++|||++|+.||......... +.. .....+.
T Consensus 154 ~~--~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~----~~~---------~~~~~~~ 218 (254)
T cd06627 154 KD--DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAAL----FRI---------VQDDHPP 218 (254)
T ss_pred cc--ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHH----HHH---------hccCCCC
Confidence 21 2234567889999987 445789999999999999999999999653311100 000 0000011
Q ss_pred CCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 679 LDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 679 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.+...+..+.+++.+||..+|++|||+.+++.+
T Consensus 219 ----~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~ 251 (254)
T cd06627 219 ----LPEGISPELKDFLMQCFQKDPNLRPTAKQLLKH 251 (254)
T ss_pred ----CCCCCCHHHHHHHHHHHhCChhhCcCHHHHhcC
Confidence 111234678899999999999999999999863
No 342
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.1e-35 Score=295.11 Aligned_cols=247 Identities=23% Similarity=0.291 Sum_probs=201.6
Q ss_pred cCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEeccccc-ccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVS-QRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVY 517 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 517 (720)
+.|..-++||+|+||.||-++. .+|+.||.|.+.+... .+......+.|-.++.++..+.||.+--.|+..+.+++|+
T Consensus 185 n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClVL 264 (591)
T KOG0986|consen 185 NTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLVL 264 (591)
T ss_pred cceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEEE
Confidence 5688889999999999999954 5799999999865432 3344456678889999999999999999999999999999
Q ss_pred eeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCC
Q 004994 518 DYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFS 597 (720)
Q Consensus 518 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~ 597 (720)
..|.||+|.-.+... +...|+.+...-++.+|+.||++||.. +||+||+||+|||+|+.|+++|+|.|+|..+..
T Consensus 265 tlMNGGDLkfHiyn~--g~~gF~e~ra~FYAAEi~cGLehlH~~---~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~ 339 (591)
T KOG0986|consen 265 TLMNGGDLKFHIYNH--GNPGFDEQRARFYAAEIICGLEHLHRR---RIVYRDLKPENILLDDHGHVRISDLGLAVEIPE 339 (591)
T ss_pred EeecCCceeEEeecc--CCCCCchHHHHHHHHHHHhhHHHHHhc---ceeeccCChhheeeccCCCeEeeccceEEecCC
Confidence 999999998777543 346799999999999999999999998 999999999999999999999999999988865
Q ss_pred CCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcC
Q 004994 598 GSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVD 676 (720)
Q Consensus 598 ~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (720)
+.. ..+..||.||||||++ .+.|+...|+||+||++|||+.|+.||.....+... +.+.+.+-
T Consensus 340 g~~---~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~-------------eEvdrr~~ 403 (591)
T KOG0986|consen 340 GKP---IRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKR-------------EEVDRRTL 403 (591)
T ss_pred CCc---cccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhH-------------HHHHHHHh
Confidence 543 3345899999999999 557999999999999999999999999754433221 11111111
Q ss_pred CCCCchhhHHHHHHHHHHHHHHhccCCCCCCC
Q 004994 677 PSLDGAYLAKSLSRFADIISRCVQWEPGFRPP 708 (720)
Q Consensus 677 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt 708 (720)
.....+++..+++..++....|++||++|..
T Consensus 404 -~~~~ey~~kFS~eakslc~~LL~Kdp~~RLG 434 (591)
T KOG0986|consen 404 -EDPEEYSDKFSEEAKSLCEGLLTKDPEKRLG 434 (591)
T ss_pred -cchhhcccccCHHHHHHHHHHHccCHHHhcc
Confidence 1112344556678899999999999999964
No 343
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=5.1e-34 Score=301.27 Aligned_cols=249 Identities=22% Similarity=0.319 Sum_probs=204.0
Q ss_pred hcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEE
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVY 517 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 517 (720)
...|...+.||+|.|++|..|.+ .++..||||.+.+..........+.+|+++|..++|||||+++.+......+|+||
T Consensus 55 vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV~ 134 (596)
T KOG0586|consen 55 VGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLVM 134 (596)
T ss_pred ccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEEE
Confidence 45788889999999999999965 56999999999887766666667999999999999999999999999999999999
Q ss_pred eeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCC
Q 004994 518 DYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFS 597 (720)
Q Consensus 518 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~ 597 (720)
||+.+|.+++++... ..........++.|+..|++|+|+. .|||||||++||||+.+.++||+|||++..+..
T Consensus 135 eya~~ge~~~yl~~~----gr~~e~~ar~~F~q~vsaveYcH~k---~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~ 207 (596)
T KOG0586|consen 135 EYASGGELFDYLVKH----GRMKEKEARAKFRQIVSAVEYCHSK---NIVHRDLKAENILLDENMNIKIADFGFSTFFDY 207 (596)
T ss_pred EeccCchhHHHHHhc----ccchhhhhhhhhHHHHHHHHHHhhc---ceeccccchhhcccccccceeeeccccceeecc
Confidence 999999999999643 3344467778899999999999998 899999999999999999999999999998853
Q ss_pred CCCcccccCccccccCCCCccCCC-C-CCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhc
Q 004994 598 GSTNELSEGLLTAHGSGAPEFESG-S-YSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMV 675 (720)
Q Consensus 598 ~~~~~~~~~~~~~~~~~aPE~~~~-~-~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (720)
..+.....|++.|.|||+..| . .++++|+||+||++|-|+.|..||++..-+.-...+.. .++.
T Consensus 208 ---~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~-----------gk~r 273 (596)
T KOG0586|consen 208 ---GLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLR-----------GKYR 273 (596)
T ss_pred ---cccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchhee-----------eeec
Confidence 334556788999999999855 3 46799999999999999999999986443221110000 0000
Q ss_pred CCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 676 DPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 676 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.+-....+..+++++++..+|.+|++++++.++
T Consensus 274 -------Ip~~ms~dce~lLrk~lvl~Pskr~~~dqim~~ 306 (596)
T KOG0586|consen 274 -------IPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMKD 306 (596)
T ss_pred -------ccceeechhHHHHHHhhccCccccCCHHHhhhh
Confidence 011122456799999999999999999998865
No 344
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=1.8e-33 Score=297.67 Aligned_cols=264 Identities=20% Similarity=0.273 Sum_probs=189.3
Q ss_pred CeeccCCCceEEEEEeCCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEeeCCCCCH
Q 004994 446 NFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDYGGNCTL 525 (720)
Q Consensus 446 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL 525 (720)
+.+|.|+++.||++.. +++.||||++..........+.+.+|+++++.++|+||+++++++.+.+..+++|||+++|+|
T Consensus 8 ~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l 86 (314)
T cd08216 8 KCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSC 86 (314)
T ss_pred HhhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCH
Confidence 3444455555555543 689999999976533344567899999999999999999999999999999999999999999
Q ss_pred HHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCCCc----
Q 004994 526 HDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTN---- 601 (720)
Q Consensus 526 ~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~---- 601 (720)
.+++.... ...+++.....++.++++||+|||+. +|+||||||+||+++.++.+||+|||.+..+......
T Consensus 87 ~~~l~~~~--~~~~~~~~~~~~~~~l~~~L~~LH~~---~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~ 161 (314)
T cd08216 87 EDLLKTHF--PEGLPELAIAFILKDVLNALDYIHSK---GFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVV 161 (314)
T ss_pred HHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCcceEEEecCCceEEecCccceeecccccccccc
Confidence 99986432 23577888889999999999999987 8999999999999999999999999998755322111
Q ss_pred -ccccCccccccCCCCccCCC---CCCCccchHhHHHHHHHHHhCCCCCCCCCCcccc-chhhhcccccCchh-------
Q 004994 602 -ELSEGLLTAHGSGAPEFESG---SYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQ-SLVRWAIPRLHDID------- 669 (720)
Q Consensus 602 -~~~~~~~~~~~~~aPE~~~~---~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~-~~~~~~~~~~~~~~------- 669 (720)
.......++..|+|||.+.+ .++.++|||||||++|||++|+.||......... .......+...+..
T Consensus 162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (314)
T cd08216 162 HDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYED 241 (314)
T ss_pred ccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcC
Confidence 11122345678999998743 4889999999999999999999999753321100 00000000000000
Q ss_pred hhhh----hcCCC----CCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 670 ALSR----MVDPS----LDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 670 ~~~~----~~~~~----~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.... ..++. ...........++.+++.+||+.||++|||++|++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 295 (314)
T cd08216 242 SMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNH 295 (314)
T ss_pred CcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcC
Confidence 0000 00000 0011222344678899999999999999999999875
No 345
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=1.2e-33 Score=302.94 Aligned_cols=272 Identities=19% Similarity=0.259 Sum_probs=200.1
Q ss_pred cCHHHHHHHhcCCCCCCeeccCCCceEEEEE-eCCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEec
Q 004994 430 FTIASLQQYTNSFSEGNFIGEGLLGSVYKAE-LPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCN 508 (720)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~ 508 (720)
....++..++++|...+.||+|+||.||+|. ..+|+.||+|++..........+.+.+|++++++++||||+++++++.
T Consensus 7 ~~~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~ 86 (345)
T cd07877 7 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT 86 (345)
T ss_pred hHHHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeee
Confidence 4556777788999999999999999999995 467899999999754333334567889999999999999999999885
Q ss_pred cC------CeEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCC
Q 004994 509 EH------GQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKL 582 (720)
Q Consensus 509 ~~------~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~ 582 (720)
.. ...+++++++ +++|.+++.. ..+++..+..++.|+++||+|||+. +|+||||||+||++++++
T Consensus 87 ~~~~~~~~~~~~lv~~~~-~~~L~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~ 157 (345)
T cd07877 87 PARSLEEFNDVYLVTHLM-GADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDC 157 (345)
T ss_pred ecccccccccEEEEehhc-ccCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEcCCC
Confidence 32 3467888876 6789887742 3588999999999999999999987 899999999999999999
Q ss_pred CeEEccccCCCCCCCCCCcccccCccccccCCCCccCC--CCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccc-hhh
Q 004994 583 IVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFES--GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQS-LVR 659 (720)
Q Consensus 583 ~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~--~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~-~~~ 659 (720)
.+||+|||+++..... .....++..|+|||... ..++.++|||||||++|||++|+.||.......... +.+
T Consensus 158 ~~kl~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~ 232 (345)
T cd07877 158 ELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 232 (345)
T ss_pred CEEEeccccccccccc-----ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 9999999998765321 12345678899999873 357889999999999999999999996543221111 111
Q ss_pred hcc-------cccCchh--hhhhhcCCCCCc---hhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 660 WAI-------PRLHDID--ALSRMVDPSLDG---AYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 660 ~~~-------~~~~~~~--~~~~~~~~~~~~---~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
... ..+.+.. ......+..... ........++.+++.+|++.||.+||++.+++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 300 (345)
T cd07877 233 LVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 300 (345)
T ss_pred HhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcC
Confidence 000 0000000 000000000000 0001124568899999999999999999999864
No 346
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-34 Score=257.35 Aligned_cols=266 Identities=19% Similarity=0.271 Sum_probs=201.6
Q ss_pred CCCCCCeeccCCCceEEEEE-eCCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEee
Q 004994 441 SFSEGNFIGEGLLGSVYKAE-LPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDY 519 (720)
Q Consensus 441 ~~~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 519 (720)
+|...++||+|.||+||||+ +++++.||+|+++....+........+|+.++++++|+|||+++++...+...-+|+||
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~ 82 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF 82 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence 45566889999999999995 56799999999987666666677889999999999999999999999999999999999
Q ss_pred CCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCC
Q 004994 520 GGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGS 599 (720)
Q Consensus 520 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~ 599 (720)
|.. +|..+.. .....++.......+.|+.+||.|.|+. ++.|||+||.|.|++.+|+.|++|||+|+.++-.-
T Consensus 83 cdq-dlkkyfd---slng~~d~~~~rsfmlqllrgl~fchsh---nvlhrdlkpqnllin~ngelkladfglarafgipv 155 (292)
T KOG0662|consen 83 CDQ-DLKKYFD---SLNGDLDPEIVRSFMLQLLRGLGFCHSH---NVLHRDLKPQNLLINRNGELKLADFGLARAFGIPV 155 (292)
T ss_pred hhH-HHHHHHH---hcCCcCCHHHHHHHHHHHHhhhhhhhhh---hhhhccCCcceEEeccCCcEEecccchhhhcCCce
Confidence 986 6776664 3356688888999999999999999987 89999999999999999999999999998764321
Q ss_pred CcccccCccccccCCCCccCCC--CCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhccccc--Cchhhhhhh
Q 004994 600 TNELSEGLLTAHGSGAPEFESG--SYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRL--HDIDALSRM 674 (720)
Q Consensus 600 ~~~~~~~~~~~~~~~aPE~~~~--~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 674 (720)
.-.....-|.+|.+|+.+.| -|+...|+||-|||+.|+.. |++-|.+.+-.+....+-|..... ..+..+.+.
T Consensus 156 --rcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~l 233 (292)
T KOG0662|consen 156 --RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKL 233 (292)
T ss_pred --EeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccC
Confidence 11122345789999998843 59999999999999999987 777776654333222222221111 112222222
Q ss_pred cCCCCCchhh-----HH----HHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 675 VDPSLDGAYL-----AK----SLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 675 ~~~~~~~~~~-----~~----~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.|...-..|+ .. ....-++++.+.+.-+|.+|.++++.+++
T Consensus 234 pdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqh 283 (292)
T KOG0662|consen 234 PDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQH 283 (292)
T ss_pred CCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcC
Confidence 2322211111 11 12345789999999999999999999875
No 347
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=1.4e-33 Score=295.40 Aligned_cols=261 Identities=16% Similarity=0.199 Sum_probs=180.9
Q ss_pred hcCCCCCCeeccCCCceEEEEEeCC----CcEEEEEEeccccccccc---------HHHHHHHHHHHHccCCCceeEEEe
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAELPG----GKLLAVKKLSNTVSQRQT---------DEEFLELASTISRLRHGNIVELIG 505 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~~~----g~~vavK~l~~~~~~~~~---------~~~~~~e~~~l~~l~H~niv~l~~ 505 (720)
.+.|...++||+|+||+||+|...+ +..+|+|........... ......+...+..++|+|++++++
T Consensus 11 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~ 90 (294)
T PHA02882 11 GKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYG 90 (294)
T ss_pred CCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEE
Confidence 3578889999999999999997643 456666654321110000 112233345566779999999999
Q ss_pred EeccCC----eEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCC
Q 004994 506 YCNEHG----QHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEK 581 (720)
Q Consensus 506 ~~~~~~----~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~ 581 (720)
++.... ..++++|++.. ++.+.+.. ....++.....++.|+++||+|||+. +|+||||||+|||++.+
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiHrDiKp~Nill~~~ 162 (294)
T PHA02882 91 CGSFKRCRMYYRFILLEKLVE-NTKEIFKR----IKCKNKKLIKNIMKDMLTTLEYIHEH---GISHGDIKPENIMVDGN 162 (294)
T ss_pred eeeEecCCceEEEEEEehhcc-CHHHHHHh----hccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCC
Confidence 765433 44677777654 55555532 22356778889999999999999987 99999999999999999
Q ss_pred CCeEEccccCCCCCCCCCCc-----ccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCcccc
Q 004994 582 LIVRVSDCGLAPLLFSGSTN-----ELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQ 655 (720)
Q Consensus 582 ~~~kl~DFGla~~~~~~~~~-----~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~ 655 (720)
+.+||+|||+|+.+...... .......+|..|+|||.. ...++.++|||||||++|||++|+.||........
T Consensus 163 ~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~- 241 (294)
T PHA02882 163 NRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGN- 241 (294)
T ss_pred CcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchH-
Confidence 99999999999876432211 111224588999999988 45689999999999999999999999975422111
Q ss_pred chhhhcccccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 004994 656 SLVRWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLL 717 (720)
Q Consensus 656 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 717 (720)
.+... ..+...++..+... ...++.++.+++..|+..+|++||+++++++.++
T Consensus 242 -~~~~~-----~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~~ 294 (294)
T PHA02882 242 -LIHAA-----KCDFIKRLHEGKIK---IKNANKFIYDFIECVTKLSYEEKPDYDALIKIFD 294 (294)
T ss_pred -HHHHh-----HHHHHHHhhhhhhc---cCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhhC
Confidence 01000 00111111111110 1123467889999999999999999999998763
No 348
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-33 Score=272.56 Aligned_cols=252 Identities=19% Similarity=0.230 Sum_probs=196.4
Q ss_pred HHhcCCCCC-CeeccCCCceEEEEE-eCCCcEEEEEEecccccccccHHHHHHHHHHHHcc-CCCceeEEEeEecc----
Q 004994 437 QYTNSFSEG-NFIGEGLLGSVYKAE-LPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRL-RHGNIVELIGYCNE---- 509 (720)
Q Consensus 437 ~~~~~~~~~-~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~---- 509 (720)
..+++|++. ++||-|-.|+|-.+. ..+|+.+|+|++... ...++|++..-.. .|||||.++++|..
T Consensus 58 ~itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds-------~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~ 130 (400)
T KOG0604|consen 58 SITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS-------PKARREVELHWMASGHPHIVSIIDVYENSYQG 130 (400)
T ss_pred cchhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC-------HHHHhHhhhhhhhcCCCceEEeehhhhhhccC
Confidence 356777764 689999999999985 457999999999643 3456777776555 79999999999864
Q ss_pred CCeEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcC---CCCeEE
Q 004994 510 HGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDE---KLIVRV 586 (720)
Q Consensus 510 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~---~~~~kl 586 (720)
...+++|||.|+||.|+..+++. +...|++.+...|+.+|+.|+.|||+. +|.||||||+|+|... +-.+||
T Consensus 131 rkcLLiVmE~meGGeLfsriq~~--g~~afTErea~eI~~qI~~Av~~lH~~---nIAHRDlKpENLLyt~t~~na~lKL 205 (400)
T KOG0604|consen 131 RKCLLIVMECMEGGELFSRIQDR--GDQAFTEREASEIMKQIGLAVRYLHSM---NIAHRDLKPENLLYTTTSPNAPLKL 205 (400)
T ss_pred ceeeEeeeecccchHHHHHHHHc--ccccchHHHHHHHHHHHHHHHHHHHhc---chhhccCChhheeeecCCCCcceEe
Confidence 34678999999999999998753 356799999999999999999999998 9999999999999964 557899
Q ss_pred ccccCCCCCCCCCCcccccCccccccCCCCccCC-CCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhccccc
Q 004994 587 SDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFES-GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRL 665 (720)
Q Consensus 587 ~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~-~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~ 665 (720)
+|||+|+.-... .....-.-|++|.|||.++ ..|+..+|+||+||+||-|+.|.+||-...... +.
T Consensus 206 tDfGFAK~t~~~---~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~a---is------- 272 (400)
T KOG0604|consen 206 TDFGFAKETQEP---GDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA---IS------- 272 (400)
T ss_pred cccccccccCCC---ccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCcc---CC-------
Confidence 999999875432 1122234578999999994 469999999999999999999999996433211 00
Q ss_pred Cchhhhhhh--cCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 666 HDIDALSRM--VDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 666 ~~~~~~~~~--~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.+.-.++ -...++...+..++++..++++.+|..+|++|.|++|++.+
T Consensus 273 --pgMk~rI~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~h 322 (400)
T KOG0604|consen 273 --PGMKRRIRTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDH 322 (400)
T ss_pred --hhHHhHhhccCccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcC
Confidence 0111111 12233344556778889999999999999999999999864
No 349
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=3.8e-33 Score=287.91 Aligned_cols=250 Identities=21% Similarity=0.285 Sum_probs=190.0
Q ss_pred HHHHHHHhcCCCCCCee--ccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHcc-CCCceeEEEeEe
Q 004994 432 IASLQQYTNSFSEGNFI--GEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRL-RHGNIVELIGYC 507 (720)
Q Consensus 432 ~~~~~~~~~~~~~~~~l--g~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~ 507 (720)
..+.....++|...+.+ |+|+||.||++.. .++..+|+|.+....... . |+.....+ +||||+++++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~--~-----e~~~~~~~~~h~~iv~~~~~~ 78 (267)
T PHA03390 6 LSELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA--I-----EPMVHQLMKDNPNFIKLYYSV 78 (267)
T ss_pred HHHHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch--h-----hHHHHHHhhcCCCEEEEEEEE
Confidence 44555666777777766 9999999999964 578899999986432111 1 11122212 799999999999
Q ss_pred ccCCeEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCC-CeEE
Q 004994 508 NEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKL-IVRV 586 (720)
Q Consensus 508 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~-~~kl 586 (720)
...+..++||||+++++|.+++... ..+++.....++.|+++||.|||+. +++||||||+||+++.++ .++|
T Consensus 79 ~~~~~~~iv~e~~~~~~L~~~l~~~----~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~l 151 (267)
T PHA03390 79 TTLKGHVLIMDYIKDGDLFDLLKKE----GKLSEAEVKKIIRQLVEALNDLHKH---NIIHNDIKLENVLYDRAKDRIYL 151 (267)
T ss_pred ecCCeeEEEEEcCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEeCCCCeEEE
Confidence 9999999999999999999998532 3789999999999999999999987 899999999999999998 9999
Q ss_pred ccccCCCCCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhccccc
Q 004994 587 SDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRL 665 (720)
Q Consensus 587 ~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~ 665 (720)
+|||+++...... ...++..|+|||.. ...++.++|||||||++|||++|+.||....... .....+
T Consensus 152 ~dfg~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~-~~~~~~----- 219 (267)
T PHA03390 152 CDYGLCKIIGTPS------CYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEE-LDLESL----- 219 (267)
T ss_pred ecCccceecCCCc------cCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcch-hhHHHH-----
Confidence 9999987653221 23467889999998 5578999999999999999999999997432211 111111
Q ss_pred CchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCC-HHHHHHH
Q 004994 666 HDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPP-MSEIVQD 715 (720)
Q Consensus 666 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt-~~evl~~ 715 (720)
........ ......+..+.+++.+||+.+|.+||+ ++|++++
T Consensus 220 ------~~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h 262 (267)
T PHA03390 220 ------LKRQQKKL--PFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKH 262 (267)
T ss_pred ------HHhhcccC--CcccccCHHHHHHHHHHhccChhhCCchHHHHhcC
Confidence 00011000 111234467889999999999999996 6999864
No 350
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=1.9e-33 Score=296.58 Aligned_cols=247 Identities=26% Similarity=0.365 Sum_probs=191.6
Q ss_pred CCCCCCeeccCCCceEEEEEe-CCCcEEEEEEeccc-ccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEe
Q 004994 441 SFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNT-VSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYD 518 (720)
Q Consensus 441 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~-~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 518 (720)
.|...+.||+|+||.||+|.. .+++.||+|.+... .......+++.+|+++++.++|+|++++++++...+..++|||
T Consensus 16 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 95 (308)
T cd06634 16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME 95 (308)
T ss_pred HHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEE
Confidence 355668899999999999965 46889999998642 1222334578899999999999999999999999999999999
Q ss_pred eCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCC
Q 004994 519 YGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSG 598 (720)
Q Consensus 519 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~ 598 (720)
|+. |++.+.+... ...+++..+..++.+++.||.|||+. +++||||||+||+++.++.+||+|||++......
T Consensus 96 ~~~-~~l~~~~~~~---~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~ 168 (308)
T cd06634 96 YCL-GSASDLLEVH---KKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA 168 (308)
T ss_pred ccC-CCHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHhEEECCCCcEEECCcccceeecCc
Confidence 997 5787776432 34578889999999999999999987 8999999999999999999999999998765322
Q ss_pred CCcccccCccccccCCCCccCC----CCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhh
Q 004994 599 STNELSEGLLTAHGSGAPEFES----GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRM 674 (720)
Q Consensus 599 ~~~~~~~~~~~~~~~~aPE~~~----~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (720)
....++..|+|||... +.++.++|||||||++|||++|+.||.......... .+. +-
T Consensus 169 ------~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~--~~~-----------~~ 229 (308)
T cd06634 169 ------NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALY--HIA-----------QN 229 (308)
T ss_pred ------ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHH--HHh-----------hc
Confidence 1235677899999862 457889999999999999999999986432111100 000 00
Q ss_pred cCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q 004994 675 VDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDL 716 (720)
Q Consensus 675 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L 716 (720)
..+.. ........+.+++.+||+.+|++||++++++++-
T Consensus 230 ~~~~~---~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~ 268 (308)
T cd06634 230 ESPAL---QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHR 268 (308)
T ss_pred CCCCc---CcccccHHHHHHHHHHhhCCcccCCCHHHHhhCc
Confidence 00110 1112345678999999999999999999998764
No 351
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-33 Score=320.31 Aligned_cols=260 Identities=24% Similarity=0.420 Sum_probs=206.4
Q ss_pred cCCCCCCeeccCCCceEEEEEeC----C----CcEEEEEEecccccccccHHHHHHHHHHHHcc-CCCceeEEEeEeccC
Q 004994 440 NSFSEGNFIGEGLLGSVYKAELP----G----GKLLAVKKLSNTVSQRQTDEEFLELASTISRL-RHGNIVELIGYCNEH 510 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~~----~----g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~ 510 (720)
++....+.+|+|.||.|++|... . ...||||.++..... ...+.+..|+++|+.+ +|+||+.++|+|...
T Consensus 296 ~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~-~~~~~~~~El~~m~~~g~H~niv~llG~~t~~ 374 (609)
T KOG0200|consen 296 ENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASS-SEKKDLMSELNVLKELGKHPNIVNLLGACTQD 374 (609)
T ss_pred hhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCc-HHHHHHHHHHHHHHHhcCCcchhhheeeeccC
Confidence 34445569999999999999642 1 457999999876554 6778999999999999 699999999999999
Q ss_pred CeEEEEEeeCCCCCHHHHhhccc---hh-------c--cccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEE
Q 004994 511 GQHLLVYDYGGNCTLHDLLHSDE---EA-------H--KKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILL 578 (720)
Q Consensus 511 ~~~~lv~e~~~~gsL~~~l~~~~---~~-------~--~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl 578 (720)
+..++|+||+..|+|.++++... .. . ..++....+.++.|||.|++||++. ++|||||.++|||+
T Consensus 375 ~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~---~~vHRDLAaRNVLi 451 (609)
T KOG0200|consen 375 GPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASV---PCVHRDLAARNVLI 451 (609)
T ss_pred CceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhC---CccchhhhhhhEEe
Confidence 99999999999999999997654 00 1 2388889999999999999999998 89999999999999
Q ss_pred cCCCCeEEccccCCCCCCCCCCcccccCc-cccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCcccc
Q 004994 579 DEKLIVRVSDCGLAPLLFSGSTNELSEGL-LTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQ 655 (720)
Q Consensus 579 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~-~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~ 655 (720)
.++..+||+|||+|+.............. .-...|||||.+ ...|+.|+|||||||+|||++| |..||.+.... .
T Consensus 452 ~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~--~ 529 (609)
T KOG0200|consen 452 TKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPT--E 529 (609)
T ss_pred cCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCcH--H
Confidence 99999999999999976554433222111 123469999998 4579999999999999999999 99999652100 0
Q ss_pred chhhhcccccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 656 SLVRWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 656 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
+ +-+.+........+..+..++.++|+.||+.+|++||++.|+.+.++.+
T Consensus 530 -------------~-l~~~l~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~ 579 (609)
T KOG0200|consen 530 -------------E-LLEFLKEGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKH 579 (609)
T ss_pred -------------H-HHHHHhcCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHH
Confidence 1 1112222222233445567899999999999999999999999999874
No 352
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=1.4e-33 Score=293.77 Aligned_cols=264 Identities=24% Similarity=0.347 Sum_probs=194.2
Q ss_pred CCCCCeeccCCCceEEEEEeC-CCcEEEEEEecccccccccHHHHHHHHHHHHccC-CCceeEEEeEeccCCeEEEEEee
Q 004994 442 FSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLR-HGNIVELIGYCNEHGQHLLVYDY 519 (720)
Q Consensus 442 ~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~~~~~~~~~~~lv~e~ 519 (720)
|...+.||+|++|+||+|... +++.||||++...... .......+|+..+++++ |+||+++++++.+.+..++||||
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~ 79 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYS-WEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEY 79 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccc-hhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEec
Confidence 456788999999999999764 5889999998754322 22334557889999999 99999999999999999999999
Q ss_pred CCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCC
Q 004994 520 GGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGS 599 (720)
Q Consensus 520 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~ 599 (720)
+ +|+|.+.+.... ...+++..+..++.+++++|.|||+. +++|+||+|+||++++++.++|+|||+++......
T Consensus 80 ~-~~~l~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~ 153 (283)
T cd07830 80 M-EGNLYQLMKDRK--GKPFSESVIRSIIYQILQGLAHIHKH---GFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRP 153 (283)
T ss_pred C-CCCHHHHHHhcc--cccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCCEEEeecccceeccCCC
Confidence 9 789988886432 24689999999999999999999987 99999999999999999999999999997664321
Q ss_pred CcccccCccccccCCCCccC--CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccc-hhhhccccc----Cchhhhh
Q 004994 600 TNELSEGLLTAHGSGAPEFE--SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQS-LVRWAIPRL----HDIDALS 672 (720)
Q Consensus 600 ~~~~~~~~~~~~~~~aPE~~--~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~-~~~~~~~~~----~~~~~~~ 672 (720)
. .....++..|+|||.. ...++.++|+||||++++||++|+.||.......... ......... .+.....
T Consensus 154 ~---~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (283)
T cd07830 154 P---YTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLA 230 (283)
T ss_pred C---cCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhh
Confidence 1 1234567789999987 3457899999999999999999999996543221110 000000000 0000000
Q ss_pred hhcCCCCC-------chhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 673 RMVDPSLD-------GAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 673 ~~~~~~~~-------~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
..++.... ..........+.+++.+||+.||++|||++|++.+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~ 280 (283)
T cd07830 231 SKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQH 280 (283)
T ss_pred ccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhC
Confidence 00000000 00011113678899999999999999999999864
No 353
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-34 Score=305.71 Aligned_cols=199 Identities=28% Similarity=0.405 Sum_probs=171.6
Q ss_pred CCCCCeeccCCCceEEEEE-eCCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccC------CeEE
Q 004994 442 FSEGNFIGEGLLGSVYKAE-LPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEH------GQHL 514 (720)
Q Consensus 442 ~~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~------~~~~ 514 (720)
|...+.||+|+||.||+++ .++|+.||||.+++.. .....+...+|++++++++|+|||++++.=++. ....
T Consensus 15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~-~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~v 93 (732)
T KOG4250|consen 15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKES-SLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPV 93 (732)
T ss_pred eeehhhhcCCccceeeeecccccccchhHHhhhhhc-ccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccce
Confidence 4445789999999999997 5789999999998654 345667889999999999999999999876543 3678
Q ss_pred EEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEc--CCC--CeEEcccc
Q 004994 515 LVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLD--EKL--IVRVSDCG 590 (720)
Q Consensus 515 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~--~~~--~~kl~DFG 590 (720)
+|||||.+|||...+...+ ....++....+.+..+++.||.|||+. +||||||||.||++- .+| ..||+|||
T Consensus 94 lvmEyC~gGsL~~~L~~PE-N~~GLpE~e~l~lL~d~~~al~~LrEn---~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG 169 (732)
T KOG4250|consen 94 LVMEYCSGGSLRKVLNSPE-NAYGLPESEFLDLLSDLVSALRHLREN---GIVHRDLKPGNIVLQIGEDGQSIYKLTDFG 169 (732)
T ss_pred EEEeecCCCcHHHHhcCcc-cccCCCHHHHHHHHHHHHHHHHHHHHc---CceeccCCCCcEEEeecCCCceEEeeeccc
Confidence 9999999999999997653 467799999999999999999999986 999999999999993 333 46999999
Q ss_pred CCCCCCCCCCcccccCccccccCCCCccCC--CCCCCccchHhHHHHHHHHHhCCCCCCC
Q 004994 591 LAPLLFSGSTNELSEGLLTAHGSGAPEFES--GSYSCQSDVYSLGVVMLELLTGRKPYDR 648 (720)
Q Consensus 591 la~~~~~~~~~~~~~~~~~~~~~~aPE~~~--~~~~~~~Dv~S~Gvvl~elltG~~Pf~~ 648 (720)
.|+.+.+++ ......||..|.+||... +.|+..+|.|||||++||.+||..||..
T Consensus 170 ~Arel~d~s---~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p 226 (732)
T KOG4250|consen 170 AARELDDNS---LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIP 226 (732)
T ss_pred ccccCCCCC---eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCc
Confidence 999986544 445588999999999884 7799999999999999999999999964
No 354
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=2.2e-33 Score=288.49 Aligned_cols=241 Identities=19% Similarity=0.226 Sum_probs=181.2
Q ss_pred CeeccCCCceEEEEEe-CCCcEEEEEEeccccc-ccccHHHHHHHHH-HHHccCCCceeEEEeEeccCCeEEEEEeeCCC
Q 004994 446 NFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVS-QRQTDEEFLELAS-TISRLRHGNIVELIGYCNEHGQHLLVYDYGGN 522 (720)
Q Consensus 446 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~~~e~~-~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 522 (720)
+.||+|+||.||+|.. .+|+.||+|.+.+... .......+..|.. +....+|+|++++++++.+.+..++||||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 5699999999999965 5689999999865321 1112223344444 34556899999999999999999999999999
Q ss_pred CCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCCCcc
Q 004994 523 CTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNE 602 (720)
Q Consensus 523 gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~~ 602 (720)
++|.+++.. ...+++.....++.|++.||.|||+. +++||||+|+||++++++.+||+|||+++....
T Consensus 82 ~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~----- 149 (260)
T cd05611 82 GDCASLIKT----LGGLPEDWAKQYIAEVVLGVEDLHQR---GIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE----- 149 (260)
T ss_pred CCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEeecccceeccc-----
Confidence 999999853 24578888999999999999999987 899999999999999999999999999875432
Q ss_pred cccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcCCCCCc
Q 004994 603 LSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDG 681 (720)
Q Consensus 603 ~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 681 (720)
.....++..|++||.. ...++.++||||||+++|||+||+.||............. . ... ....
T Consensus 150 -~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~--~----------~~~--~~~~ 214 (260)
T cd05611 150 -NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNIL--S----------RRI--NWPE 214 (260)
T ss_pred -cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH--h----------ccc--CCCC
Confidence 1224567789999988 4457999999999999999999999996543211100000 0 000 0000
Q ss_pred hhhHHHHHHHHHHHHHHhccCCCCCCCHHHHH
Q 004994 682 AYLAKSLSRFADIISRCVQWEPGFRPPMSEIV 713 (720)
Q Consensus 682 ~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl 713 (720)
......+..+.+++.+||+.+|++||++.++.
T Consensus 215 ~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~ 246 (260)
T cd05611 215 EVKEFCSPEAVDLINRLLCMDPAKRLGANGYQ 246 (260)
T ss_pred cccccCCHHHHHHHHHHccCCHHHccCCCcHH
Confidence 01112346788999999999999999765333
No 355
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=5.7e-33 Score=293.53 Aligned_cols=245 Identities=26% Similarity=0.347 Sum_probs=190.4
Q ss_pred CCCCCeeccCCCceEEEEEe-CCCcEEEEEEeccccc-ccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEee
Q 004994 442 FSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVS-QRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDY 519 (720)
Q Consensus 442 ~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 519 (720)
|...+.||+|+||+||+|.. .+|+.||+|++..... .....+.+.+|+++++.++|||++++++++.+....++||||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 55567899999999999965 5689999999864322 223345688899999999999999999999999999999999
Q ss_pred CCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCC
Q 004994 520 GGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGS 599 (720)
Q Consensus 520 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~ 599 (720)
+. |++.+++.. ....+++..+..++.+++.||.|||+. +++||||||+||++++++.+||+|||++.....
T Consensus 103 ~~-~~l~~~l~~---~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~-- 173 (313)
T cd06633 103 CL-GSASDLLEV---HKKPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASKSSP-- 173 (313)
T ss_pred CC-CCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChhhEEECCCCCEEEeecCCCcccCC--
Confidence 96 477777643 234688999999999999999999987 899999999999999999999999999864321
Q ss_pred CcccccCccccccCCCCccC----CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhc
Q 004994 600 TNELSEGLLTAHGSGAPEFE----SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMV 675 (720)
Q Consensus 600 ~~~~~~~~~~~~~~~aPE~~----~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (720)
.....++..|+|||++ .+.++.++|||||||++|||++|+.||.............. ..
T Consensus 174 ----~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~-------------~~ 236 (313)
T cd06633 174 ----ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQ-------------ND 236 (313)
T ss_pred ----CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh-------------cC
Confidence 1234567889999987 24588899999999999999999999865432111100000 00
Q ss_pred CCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 676 DPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 676 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.+.. .....+..+.+++.+||+.+|.+||++.+++++
T Consensus 237 ~~~~---~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 237 SPTL---QSNEWTDSFRGFVDYCLQKIPQERPASAELLRH 273 (313)
T ss_pred CCCC---CccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0000 011123467899999999999999999999865
No 356
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=9.8e-34 Score=299.06 Aligned_cols=270 Identities=23% Similarity=0.294 Sum_probs=194.2
Q ss_pred hcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccC-------
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEH------- 510 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~------- 510 (720)
.++|...+.||+|+||.||+|.. .+++.||||++............+.+|++++++++||||+++++++.+.
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 46788899999999999999965 4689999999865433333345677899999999999999999987443
Q ss_pred -CeEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccc
Q 004994 511 -GQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDC 589 (720)
Q Consensus 511 -~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DF 589 (720)
...++|+||+.. ++.+.+.. ....+++.....++.++++||.|||+. +|+||||||+||++++++.+||+||
T Consensus 87 ~~~~~lv~~~~~~-~l~~~~~~---~~~~~~~~~~~~i~~~l~~al~~lH~~---~i~H~dl~p~nil~~~~~~~~l~df 159 (311)
T cd07866 87 RGSVYMVTPYMDH-DLSGLLEN---PSVKLTESQIKCYMLQLLEGINYLHEN---HILHRDIKAANILIDNQGILKIADF 159 (311)
T ss_pred CceEEEEEecCCc-CHHHHHhc---cccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECcC
Confidence 356999999875 67666643 234689999999999999999999987 8999999999999999999999999
Q ss_pred cCCCCCCCCCCccc---------ccCccccccCCCCccCC--CCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchh
Q 004994 590 GLAPLLFSGSTNEL---------SEGLLTAHGSGAPEFES--GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLV 658 (720)
Q Consensus 590 Gla~~~~~~~~~~~---------~~~~~~~~~~~aPE~~~--~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~ 658 (720)
|+++.......... .....++..|+|||... ..++.++|||||||++|||++|+.||...........+
T Consensus 160 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~ 239 (311)
T cd07866 160 GLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLI 239 (311)
T ss_pred ccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 99976543221111 11234567899999873 34789999999999999999999999754432211111
Q ss_pred hhcccc-----cCchhhhhhhc----CCCCCch---hhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 659 RWAIPR-----LHDIDALSRMV----DPSLDGA---YLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 659 ~~~~~~-----~~~~~~~~~~~----~~~~~~~---~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
...... ......+.... ....... ........+.+++.+||+.||++|||+.|++.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~ 308 (311)
T cd07866 240 FKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEH 308 (311)
T ss_pred HHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcC
Confidence 100000 00000000000 0000000 011123568899999999999999999999864
No 357
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=1.9e-33 Score=298.99 Aligned_cols=267 Identities=21% Similarity=0.308 Sum_probs=197.0
Q ss_pred HHHHhcCCCCCCeeccCCCceEEEEE-eCCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEecc-CCe
Q 004994 435 LQQYTNSFSEGNFIGEGLLGSVYKAE-LPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNE-HGQ 512 (720)
Q Consensus 435 ~~~~~~~~~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~-~~~ 512 (720)
+..++++|+..+.||+|+||.||+|. ..+++.||+|++.+........+.+..|++++++++||||+++++++.. ...
T Consensus 5 ~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 84 (328)
T cd07856 5 VFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLED 84 (328)
T ss_pred eeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCc
Confidence 34467889999999999999999995 4579999999987544434455678899999999999999999998865 567
Q ss_pred EEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCC
Q 004994 513 HLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLA 592 (720)
Q Consensus 513 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla 592 (720)
.++|+||++ ++|.+++.. ..+++.....++.++++||.|||+. +|+||||||+||++++++.+||+|||++
T Consensus 85 ~~lv~e~~~-~~L~~~~~~-----~~~~~~~~~~~~~ql~~aL~~LH~~---~iiH~dl~p~Nili~~~~~~~l~dfg~~ 155 (328)
T cd07856 85 IYFVTELLG-TDLHRLLTS-----RPLEKQFIQYFLYQILRGLKYVHSA---GVVHRDLKPSNILINENCDLKICDFGLA 155 (328)
T ss_pred EEEEeehhc-cCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEeECCCCCEEeCccccc
Confidence 899999985 588887742 3467788888999999999999987 8999999999999999999999999998
Q ss_pred CCCCCCCCcccccCccccccCCCCccC-C-CCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccch-hhhccc------
Q 004994 593 PLLFSGSTNELSEGLLTAHGSGAPEFE-S-GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSL-VRWAIP------ 663 (720)
Q Consensus 593 ~~~~~~~~~~~~~~~~~~~~~~aPE~~-~-~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~-~~~~~~------ 663 (720)
+...... ....++..|+|||.. . ..++.++|||||||++|||+||+.||........... .+....
T Consensus 156 ~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 230 (328)
T cd07856 156 RIQDPQM-----TGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVI 230 (328)
T ss_pred cccCCCc-----CCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHH
Confidence 7543211 123456789999987 3 3689999999999999999999999965432111100 000000
Q ss_pred -ccCchhhhhhhcCCCCCch-----hhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 664 -RLHDIDALSRMVDPSLDGA-----YLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 664 -~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
...+......+..-..... ........+.+++.+||+.+|++|||+++++.+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 231 NTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred HhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0000000000000000000 001124678899999999999999999999865
No 358
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=2.1e-33 Score=289.01 Aligned_cols=244 Identities=21% Similarity=0.288 Sum_probs=189.2
Q ss_pred eccCCCceEEEEEeC-CCcEEEEEEeccccc-ccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEeeCCCCCH
Q 004994 448 IGEGLLGSVYKAELP-GGKLLAVKKLSNTVS-QRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDYGGNCTL 525 (720)
Q Consensus 448 lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL 525 (720)
||+|+||.||++... +|+.||+|++..... .....+.+.+|++++++++|+||+++++.+......+++|||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 689999999999765 599999999865422 224456788999999999999999999999999999999999999999
Q ss_pred HHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCCC-----
Q 004994 526 HDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGST----- 600 (720)
Q Consensus 526 ~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~~----- 600 (720)
.+++... ..+++..+..++.|+++||+|||+. +++|+||+|+||++++++.+||+|||++........
T Consensus 81 ~~~l~~~----~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~ 153 (265)
T cd05579 81 ASLLENV----GSLDEDVARIYIAEIVLALEYLHSN---GIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLND 153 (265)
T ss_pred HHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHc---CeecCCCCHHHeEEcCCCCEEEEecccchhcccCccccccc
Confidence 9998532 3688999999999999999999987 899999999999999999999999999876533211
Q ss_pred -cccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcCCC
Q 004994 601 -NELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPS 678 (720)
Q Consensus 601 -~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (720)
........++..|++||.. ...++.++||||||+++||+++|+.||......... . .+....
T Consensus 154 ~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~---~-------------~~~~~~ 217 (265)
T cd05579 154 DEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIF---Q-------------NILNGK 217 (265)
T ss_pred ccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHH---H-------------HHhcCC
Confidence 0112234567789999987 456888999999999999999999999754322111 0 000000
Q ss_pred CCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 004994 679 LDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQ 714 (720)
Q Consensus 679 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 714 (720)
.........+..+.+++.+||+.+|++|||+.++.+
T Consensus 218 ~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~ 253 (265)
T cd05579 218 IEWPEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEE 253 (265)
T ss_pred cCCCccccCCHHHHHHHHHHhcCCHhhcCCCccHHH
Confidence 000000012467889999999999999999944433
No 359
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=2.3e-33 Score=300.37 Aligned_cols=265 Identities=18% Similarity=0.279 Sum_probs=195.8
Q ss_pred HHhcCCCCCCeeccCCCceEEEEE-eCCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCC----
Q 004994 437 QYTNSFSEGNFIGEGLLGSVYKAE-LPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHG---- 511 (720)
Q Consensus 437 ~~~~~~~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~---- 511 (720)
...++|...+.||+|+||.||+|. ..+|..||||++..........+.+.+|++++++++||||+++++++....
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07880 12 EVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDR 91 (343)
T ss_pred ccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccc
Confidence 356789999999999999999995 457999999998654333344567889999999999999999999886543
Q ss_pred --eEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccc
Q 004994 512 --QHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDC 589 (720)
Q Consensus 512 --~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DF 589 (720)
..++||||+ +++|.+++.. ..+++..+..++.++++||+|||.. +|+||||||+||+++.++.+||+||
T Consensus 92 ~~~~~lv~e~~-~~~l~~~~~~-----~~l~~~~~~~i~~qi~~al~~LH~~---gi~H~dlkp~Nill~~~~~~kl~df 162 (343)
T cd07880 92 FHDFYLVMPFM-GTDLGKLMKH-----EKLSEDRIQFLVYQMLKGLKYIHAA---GIIHRDLKPGNLAVNEDCELKILDF 162 (343)
T ss_pred cceEEEEEecC-CCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeec
Confidence 468999998 5688887742 3588999999999999999999987 8999999999999999999999999
Q ss_pred cCCCCCCCCCCcccccCccccccCCCCccCC--CCCCCccchHhHHHHHHHHHhCCCCCCCCCCcccc-chhhhccc---
Q 004994 590 GLAPLLFSGSTNELSEGLLTAHGSGAPEFES--GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQ-SLVRWAIP--- 663 (720)
Q Consensus 590 Gla~~~~~~~~~~~~~~~~~~~~~~aPE~~~--~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~-~~~~~~~~--- 663 (720)
|++....... ....++..|++||... ..++.++|||||||++|++++|+.||......... .+......
T Consensus 163 g~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 237 (343)
T cd07880 163 GLARQTDSEM-----TGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSK 237 (343)
T ss_pred ccccccccCc-----cccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCH
Confidence 9998653221 2235577899999874 35889999999999999999999999754321110 00000000
Q ss_pred ----ccCch--hhhhhhcCCCCCc---hhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 664 ----RLHDI--DALSRMVDPSLDG---AYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 664 ----~~~~~--~~~~~~~~~~~~~---~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.+... ......+...... ........++.+++.+|++.||++|||+.+++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~ 298 (343)
T cd07880 238 EFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAH 298 (343)
T ss_pred HHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00000 0000000000000 0111234568899999999999999999999853
No 360
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=4.4e-33 Score=291.19 Aligned_cols=252 Identities=25% Similarity=0.310 Sum_probs=193.4
Q ss_pred CCCCCCeeccCCCceEEEEEe----CCCcEEEEEEeccccc--ccccHHHHHHHHHHHHcc-CCCceeEEEeEeccCCeE
Q 004994 441 SFSEGNFIGEGLLGSVYKAEL----PGGKLLAVKKLSNTVS--QRQTDEEFLELASTISRL-RHGNIVELIGYCNEHGQH 513 (720)
Q Consensus 441 ~~~~~~~lg~G~~g~Vy~~~~----~~g~~vavK~l~~~~~--~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~ 513 (720)
+|+..+.||+|+||.||+|.. .+|+.||+|++..... .....+.+.+|+++++++ +|+||+++++++..+...
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 366778999999999999965 4689999999875322 123446788899999999 599999999999998999
Q ss_pred EEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCC
Q 004994 514 LLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAP 593 (720)
Q Consensus 514 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~ 593 (720)
++||||+++++|.+++.. ...+++.....++.++++||.|||+. +++||||||+|||++.++.+||+|||+++
T Consensus 81 ~lv~e~~~~~~L~~~l~~----~~~l~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~ 153 (290)
T cd05613 81 HLILDYINGGELFTHLSQ----RERFKEQEVQIYSGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSK 153 (290)
T ss_pred EEEEecCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEECCCCCEEEeeCccce
Confidence 999999999999998853 34577888888999999999999987 99999999999999999999999999997
Q ss_pred CCCCCCCcccccCccccccCCCCccCCC---CCCCccchHhHHHHHHHHHhCCCCCCCCCCcccc-chhhhcccccCchh
Q 004994 594 LLFSGSTNELSEGLLTAHGSGAPEFESG---SYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQ-SLVRWAIPRLHDID 669 (720)
Q Consensus 594 ~~~~~~~~~~~~~~~~~~~~~aPE~~~~---~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~-~~~~~~~~~~~~~~ 669 (720)
....... .......++..|+|||...+ .++.++||||||+++|||+||+.||......... .+...
T Consensus 154 ~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~--------- 223 (290)
T cd05613 154 EFHEDEV-ERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRR--------- 223 (290)
T ss_pred ecccccc-cccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHH---------
Confidence 6533221 11223457788999999842 4678999999999999999999999643221110 00000
Q ss_pred hhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCC-----CHHHHHHH
Q 004994 670 ALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRP-----PMSEIVQD 715 (720)
Q Consensus 670 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~evl~~ 715 (720)
... ..+. ++......+.+++.+||+.||++|| ++++++.+
T Consensus 224 -~~~-~~~~----~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~ 268 (290)
T cd05613 224 -ILK-SEPP----YPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKH 268 (290)
T ss_pred -hhc-cCCC----CCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcC
Confidence 000 0011 1122345678999999999999997 77777654
No 361
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=2.7e-33 Score=292.89 Aligned_cols=243 Identities=25% Similarity=0.370 Sum_probs=191.9
Q ss_pred CeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEeeCCCCC
Q 004994 446 NFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDYGGNCT 524 (720)
Q Consensus 446 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gs 524 (720)
..||+|+||.||++.. .+++.||||++.... ......+.+|+.+++.++|+||+++++++...+..++||||+++++
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 103 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRK--QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGA 103 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEecccc--hhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCc
Confidence 5699999999999966 578999999985322 2345678899999999999999999999999999999999999999
Q ss_pred HHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCCCcccc
Q 004994 525 LHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELS 604 (720)
Q Consensus 525 L~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~~~~ 604 (720)
|.+++.. ..+++.....++.+++.||+|||+. +++||||||+||++++++.++|+|||++....... ...
T Consensus 104 L~~~~~~-----~~~~~~~~~~~~~ql~~~l~~lH~~---givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~--~~~ 173 (292)
T cd06657 104 LTDIVTH-----TRMNEEQIAAVCLAVLKALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV--PRR 173 (292)
T ss_pred HHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEcccccceeccccc--ccc
Confidence 9987742 3478889999999999999999987 89999999999999999999999999987653321 112
Q ss_pred cCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcCCCCCchh
Q 004994 605 EGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDGAY 683 (720)
Q Consensus 605 ~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 683 (720)
....++.+|++||+. ...++.++|||||||++|||++|+.||........... ......+.+..
T Consensus 174 ~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~-------------~~~~~~~~~~~-- 238 (292)
T cd06657 174 KSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKM-------------IRDNLPPKLKN-- 238 (292)
T ss_pred cccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH-------------HHhhCCcccCC--
Confidence 234567889999988 45689999999999999999999999964322111100 01111111110
Q ss_pred hHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 684 LAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 684 ~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
....+..+.+++.+||+.+|.+||++.+++++
T Consensus 239 ~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~ 270 (292)
T cd06657 239 LHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 270 (292)
T ss_pred cccCCHHHHHHHHHHHhCCcccCcCHHHHhcC
Confidence 11223567899999999999999999999874
No 362
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=1.9e-33 Score=299.59 Aligned_cols=267 Identities=20% Similarity=0.293 Sum_probs=198.8
Q ss_pred CCCCCCeeccCCCceEEEEEeC-CCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCC-----eEE
Q 004994 441 SFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHG-----QHL 514 (720)
Q Consensus 441 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~-----~~~ 514 (720)
+|...+.||+|++|.||+|... +++.||||++..........+.+.+|+++++.++|+||+++++++...+ ..+
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 4677899999999999999764 5899999999765433455578899999999999999999999987765 789
Q ss_pred EEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCC
Q 004994 515 LVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPL 594 (720)
Q Consensus 515 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~ 594 (720)
+||||+++ +|.+++.. ...+++..+..++.++++||.|||+. +|+||||||+|||++.++.++|+|||++..
T Consensus 81 lv~e~~~~-~l~~~l~~----~~~l~~~~~~~i~~~l~~~l~~LH~~---gi~H~dlkp~nili~~~~~~~L~dfg~~~~ 152 (330)
T cd07834 81 IVTELMET-DLHKVIKS----PQPLTDDHIQYFLYQILRGLKYLHSA---NVIHRDLKPSNILVNSNCDLKICDFGLARG 152 (330)
T ss_pred EEecchhh-hHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccCceEe
Confidence 99999984 88888753 23788999999999999999999987 899999999999999999999999999987
Q ss_pred CCCCCCc-ccccCccccccCCCCccC-CC-CCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccC-----
Q 004994 595 LFSGSTN-ELSEGLLTAHGSGAPEFE-SG-SYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLH----- 666 (720)
Q Consensus 595 ~~~~~~~-~~~~~~~~~~~~~aPE~~-~~-~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~----- 666 (720)
....... .......++..|+|||.+ .. .++.++||||||+++|+|++|+.||...........+........
T Consensus 153 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 232 (330)
T cd07834 153 VDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLK 232 (330)
T ss_pred ecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhh
Confidence 6443210 112234567889999998 33 588999999999999999999999976543211110000000000
Q ss_pred --chhhhhhhcC---CCCC---chhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 667 --DIDALSRMVD---PSLD---GAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 667 --~~~~~~~~~~---~~~~---~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
........+. .... .......+..+.+++.+||+.+|++|||+++++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 289 (330)
T cd07834 233 FITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAH 289 (330)
T ss_pred hccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 0000000000 0000 00011234678899999999999999999999975
No 363
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=3.2e-33 Score=287.29 Aligned_cols=252 Identities=19% Similarity=0.295 Sum_probs=192.9
Q ss_pred CCCCCCeeccCCCceEEEEEeC-CCcEEEEEEecccc---cccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEE
Q 004994 441 SFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTV---SQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLV 516 (720)
Q Consensus 441 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 516 (720)
+|...+.||+|+||.||++... .+..+++|.++... .......++..|+.++++++||||+++++++.+....++|
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 3677789999999999999653 34556666654321 1223345677889999999999999999999998899999
Q ss_pred EeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCC
Q 004994 517 YDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLF 596 (720)
Q Consensus 517 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~ 596 (720)
|||+++++|.+++.........+++..+..++.++++||.|||+. +++|+||||+||++++ +.+||+|||+++...
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~ 156 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQR---RILHRDLKAKNIFLKN-NLLKIGDFGVSRLLM 156 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHc---CccccCCChhheEeec-CCEeecccCceeecC
Confidence 999999999998865433456789999999999999999999987 9999999999999986 569999999987764
Q ss_pred CCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhc
Q 004994 597 SGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMV 675 (720)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (720)
.... ......++..|+|||.. ...++.++|+||||+++|+|++|+.||....... . .....
T Consensus 157 ~~~~--~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~---~-------------~~~~~ 218 (260)
T cd08222 157 GSCD--LATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLS---V-------------VLRIV 218 (260)
T ss_pred CCcc--cccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHH---H-------------HHHHH
Confidence 3221 22234567789999987 4568889999999999999999999996432110 0 00111
Q ss_pred CCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 676 DPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 676 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
... ....+...+.++.+++.+||+.+|++||++.|++++
T Consensus 219 ~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 257 (260)
T cd08222 219 EGP-TPSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILRN 257 (260)
T ss_pred cCC-CCCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhhC
Confidence 100 001122344678899999999999999999999875
No 364
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=3.6e-33 Score=297.70 Aligned_cols=266 Identities=19% Similarity=0.267 Sum_probs=191.1
Q ss_pred CCCCCCeeccCCCceEEEEEeC-C--CcEEEEEEecccccccccHHHHHHHHHHHHcc-CCCceeEEEeEecc----CCe
Q 004994 441 SFSEGNFIGEGLLGSVYKAELP-G--GKLLAVKKLSNTVSQRQTDEEFLELASTISRL-RHGNIVELIGYCNE----HGQ 512 (720)
Q Consensus 441 ~~~~~~~lg~G~~g~Vy~~~~~-~--g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~----~~~ 512 (720)
+|...+.||+|+||.||++... . +..||+|++..........+.+.+|+++++++ +||||+++++++.. ...
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 3666789999999999999653 4 78999999875443334456788899999999 59999999987532 245
Q ss_pred EEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCC
Q 004994 513 HLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLA 592 (720)
Q Consensus 513 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla 592 (720)
.++++||++ ++|.+++.. ...+++.....++.|++.||.|||+. +|+||||||+||++++++.+||+|||++
T Consensus 81 ~~~~~e~~~-~~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---givH~dlkp~Nili~~~~~~kl~Dfg~a 152 (332)
T cd07857 81 LYLYEELME-ADLHQIIRS----GQPLTDAHFQSFIYQILCGLKYIHSA---NVLHRDLKPGNLLVNADCELKICDFGLA 152 (332)
T ss_pred EEEEEeccc-CCHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHeEEcCCCCEEeCcCCCc
Confidence 788888887 588888743 34688999999999999999999987 8999999999999999999999999999
Q ss_pred CCCCCCCCc--ccccCccccccCCCCccCC--CCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCch
Q 004994 593 PLLFSGSTN--ELSEGLLTAHGSGAPEFES--GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDI 668 (720)
Q Consensus 593 ~~~~~~~~~--~~~~~~~~~~~~~aPE~~~--~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~ 668 (720)
+.+...... .......++..|+|||... ..++.++|||||||++|+|++|+.||...........+..... ....
T Consensus 153 ~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~-~~~~ 231 (332)
T cd07857 153 RGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLG-TPDE 231 (332)
T ss_pred eecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhC-CCCH
Confidence 865432211 1122345788899999863 3589999999999999999999999975432111000000000 0000
Q ss_pred hhhhhhcCC-----------CCC---chhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 669 DALSRMVDP-----------SLD---GAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 669 ~~~~~~~~~-----------~~~---~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
+...++..+ ... ..........+.+++.+|++.||++|||+.|++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~ 292 (332)
T cd07857 232 ETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEH 292 (332)
T ss_pred HHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 001100000 000 00001123578899999999999999999999853
No 365
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=3.4e-33 Score=290.46 Aligned_cols=265 Identities=22% Similarity=0.318 Sum_probs=196.6
Q ss_pred CCCCCeeccCCCceEEEEEeC-CCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEeeC
Q 004994 442 FSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDYG 520 (720)
Q Consensus 442 ~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 520 (720)
|+..+.||+|++|.||+|... +++.||+|.+..........+.+..|++++++++|+||+++++++.+.+..++||||+
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC 80 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence 455688999999999999664 5899999999865434445577889999999999999999999999999999999999
Q ss_pred CCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCCC
Q 004994 521 GNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGST 600 (720)
Q Consensus 521 ~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~~ 600 (720)
+ ++|.+++... ...+++..+.+++.++++||+|||+. +|+||||+|+||++++++.+||+|||+++.......
T Consensus 81 ~-~~l~~~i~~~---~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~ 153 (282)
T cd07829 81 D-MDLKKYLDKR---PGPLSPNLIKSIMYQLLRGLAYCHSH---RILHRDLKPQNILINRDGVLKLADFGLARAFGIPLR 153 (282)
T ss_pred C-cCHHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChheEEEcCCCCEEEecCCcccccCCCcc
Confidence 8 4899998642 14688999999999999999999997 899999999999999999999999999987643221
Q ss_pred cccccCccccccCCCCccC-CC-CCCCccchHhHHHHHHHHHhCCCCCCCCCCccccc-hhhhcc-------cccCchhh
Q 004994 601 NELSEGLLTAHGSGAPEFE-SG-SYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQS-LVRWAI-------PRLHDIDA 670 (720)
Q Consensus 601 ~~~~~~~~~~~~~~aPE~~-~~-~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~-~~~~~~-------~~~~~~~~ 670 (720)
.......+..|+|||.. .. .++.++|||||||++|||++|+.||.......... +.+... ..+.+...
T Consensus 154 --~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (282)
T cd07829 154 --TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPD 231 (282)
T ss_pred --ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhccccc
Confidence 11223346679999987 33 68899999999999999999999996543211100 000000 00000000
Q ss_pred hhhhcCC---CCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 671 LSRMVDP---SLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 671 ~~~~~~~---~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
....... .............+.+++.+||+.||++||++++++.+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 279 (282)
T cd07829 232 YKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKH 279 (282)
T ss_pred ccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhC
Confidence 0000000 00000011124578999999999999999999999864
No 366
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=2.2e-33 Score=291.46 Aligned_cols=251 Identities=22% Similarity=0.318 Sum_probs=198.6
Q ss_pred cCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEeccccc-ccccHHHHHHHHHHHHccC-CCceeEEEeEeccCCeEEEE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVS-QRQTDEEFLELASTISRLR-HGNIVELIGYCNEHGQHLLV 516 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~~~e~~~l~~l~-H~niv~l~~~~~~~~~~~lv 516 (720)
++|...+.||+|+||.||+|.. .+|+.||+|++.+... .....+.+.+|.+++++++ |+||+++++++.+.+..++|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 3678889999999999999965 4799999999875322 2233467889999999998 99999999999999999999
Q ss_pred EeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCC
Q 004994 517 YDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLF 596 (720)
Q Consensus 517 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~ 596 (720)
|||+++++|.+++.. ...+++.....++.+++.||.|||+. +++|+||||+||+++.++.++++|||++....
T Consensus 81 ~e~~~~~~L~~~l~~----~~~l~~~~~~~i~~ql~~~l~~Lh~~---~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~ 153 (280)
T cd05581 81 LEYAPNGELLQYIRK----YGSLDEKCTRFYAAEILLALEYLHSK---GIIHRDLKPENILLDKDMHIKITDFGTAKVLD 153 (280)
T ss_pred EcCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEecCCccccccC
Confidence 999999999999853 23689999999999999999999987 89999999999999999999999999987664
Q ss_pred CCCCc------------------ccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccch
Q 004994 597 SGSTN------------------ELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSL 657 (720)
Q Consensus 597 ~~~~~------------------~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~ 657 (720)
..... .......++..|++||.. ...++.++||||||++++|+++|+.||.......
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~---- 229 (280)
T cd05581 154 PNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYL---- 229 (280)
T ss_pred CccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHH----
Confidence 32210 112234467789999987 4568899999999999999999999997543111
Q ss_pred hhhcccccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCH----HHHHHH
Q 004994 658 VRWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPM----SEIVQD 715 (720)
Q Consensus 658 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~----~evl~~ 715 (720)
....+.+.. ...+...++.+.+++.+||+.+|++||++ ++++++
T Consensus 230 ------------~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~ 277 (280)
T cd05581 230 ------------TFQKILKLE--YSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAH 277 (280)
T ss_pred ------------HHHHHHhcC--CCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcC
Confidence 001111000 00111224578899999999999999999 888764
No 367
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=6e-33 Score=296.45 Aligned_cols=268 Identities=21% Similarity=0.273 Sum_probs=192.6
Q ss_pred cCCC-CCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccc------------cHHHHHHHHHHHHccCCCceeEEEe
Q 004994 440 NSFS-EGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQ------------TDEEFLELASTISRLRHGNIVELIG 505 (720)
Q Consensus 440 ~~~~-~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~------------~~~~~~~e~~~l~~l~H~niv~l~~ 505 (720)
++|. ..+.||+|+||+||+|.. .+++.||||.++....... ....+.+|++++++++|+||+++++
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 87 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD 87 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence 3454 357799999999999964 5789999999864322110 1125778999999999999999999
Q ss_pred EeccCCeEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeE
Q 004994 506 YCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVR 585 (720)
Q Consensus 506 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~k 585 (720)
++...+..++||||+. |+|.+++.. ...+++.....++.++++||+|||+. +++||||||+||+++.++.+|
T Consensus 88 ~~~~~~~~~lv~e~~~-~~l~~~l~~----~~~~~~~~~~~~~~ql~~aL~~LH~~---~i~H~dl~~~nill~~~~~~k 159 (335)
T PTZ00024 88 VYVEGDFINLVMDIMA-SDLKKVVDR----KIRLTESQVKCILLQILNGLNVLHKW---YFMHRDLSPANIFINSKGICK 159 (335)
T ss_pred EEecCCcEEEEEeccc-cCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHeEECCCCCEE
Confidence 9999999999999997 589888843 34578889999999999999999987 999999999999999999999
Q ss_pred EccccCCCCCCCCCC------------cccccCccccccCCCCccCCC--CCCCccchHhHHHHHHHHHhCCCCCCCCCC
Q 004994 586 VSDCGLAPLLFSGST------------NELSEGLLTAHGSGAPEFESG--SYSCQSDVYSLGVVMLELLTGRKPYDRSRP 651 (720)
Q Consensus 586 l~DFGla~~~~~~~~------------~~~~~~~~~~~~~~aPE~~~~--~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~ 651 (720)
|+|||+++....... ........++..|+|||.+.+ .++.++|||||||++|||+||+.||...+.
T Consensus 160 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~ 239 (335)
T PTZ00024 160 IADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENE 239 (335)
T ss_pred ECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH
Confidence 999999976541110 011112335678999998843 478999999999999999999999975543
Q ss_pred ccccc-hhhhcc-cc---cCchhhhhhh--cCCCCCch---hhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 652 RGEQS-LVRWAI-PR---LHDIDALSRM--VDPSLDGA---YLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 652 ~~~~~-~~~~~~-~~---~~~~~~~~~~--~~~~~~~~---~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
..... +..... +. +.....+... ........ .......++.+++.+||+.+|++|||++|++.+
T Consensus 240 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~ 313 (335)
T PTZ00024 240 IDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKH 313 (335)
T ss_pred HHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcC
Confidence 21110 000000 00 0000000000 00000000 011124568899999999999999999999864
No 368
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=5.9e-35 Score=277.04 Aligned_cols=247 Identities=26% Similarity=0.365 Sum_probs=187.6
Q ss_pred CeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHcc-CCCceeEEEeEeccCCeEEEEEeeCCCC
Q 004994 446 NFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRL-RHGNIVELIGYCNEHGQHLLVYDYGGNC 523 (720)
Q Consensus 446 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv~e~~~~g 523 (720)
..||.|+||+|+|-.+ +.|+..|||+++.... ..+.++++.|.++..+- +.||||++||.+..++..|+.||.|+-
T Consensus 70 g~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~-~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd~- 147 (361)
T KOG1006|consen 70 GEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNI-EKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMDI- 147 (361)
T ss_pred HHhcCCcchhhhhhhcCccCcEEEEEEeeeccc-hHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHhh-
Confidence 5699999999999854 6799999999986544 34557788888876555 789999999999999999999999975
Q ss_pred CHHHHhhcc-chhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCCCcc
Q 004994 524 TLHDLLHSD-EEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNE 602 (720)
Q Consensus 524 sL~~~l~~~-~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~~ 602 (720)
|+..+...- ......+++.....|+.....||.||...+ .|||||+||+|||+|..|.+||||||++..+..+-.
T Consensus 148 SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~l--kiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~SiA-- 223 (361)
T KOG1006|consen 148 SLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEEL--KIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDSIA-- 223 (361)
T ss_pred hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHh--hhhhccCChhheEEecCCCEeeecccchHhHHHHHH--
Confidence 655443211 123456788888889999999999998764 799999999999999999999999999977643211
Q ss_pred cccCccccccCCCCccCC--C-CCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcC---
Q 004994 603 LSEGLLTAHGSGAPEFES--G-SYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVD--- 676 (720)
Q Consensus 603 ~~~~~~~~~~~~aPE~~~--~-~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 676 (720)
...-.|-..|||||.+. + .|+.++||||+|+.|||+.||+.||..-.. . .+.+..++.
T Consensus 224 -kT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~s--v-------------feql~~Vv~gdp 287 (361)
T KOG1006|consen 224 -KTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDS--V-------------FEQLCQVVIGDP 287 (361)
T ss_pred -hhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHH--H-------------HHHHHHHHcCCC
Confidence 12234667899999983 3 399999999999999999999999964211 0 011111111
Q ss_pred CCCC-chhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 004994 677 PSLD-GAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQ 714 (720)
Q Consensus 677 ~~~~-~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 714 (720)
|.+. ..........+.+++-.||.+|-+.||.+.++.+
T Consensus 288 p~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~ 326 (361)
T KOG1006|consen 288 PILLFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKK 326 (361)
T ss_pred CeecCcccccccCHHHHHHHHHHhhcccccCcchhhhhc
Confidence 1111 1111234567899999999999999999998865
No 369
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=1.9e-33 Score=301.13 Aligned_cols=264 Identities=20% Similarity=0.292 Sum_probs=195.8
Q ss_pred HhcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCe----
Q 004994 438 YTNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQ---- 512 (720)
Q Consensus 438 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~---- 512 (720)
+.++|...+.||+|++|.||+|.. .+++.||||++..........+.+.+|+.++++++|+||+++++++...+.
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF 92 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence 467888899999999999999966 468899999987543333344667889999999999999999998765544
Q ss_pred --EEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEcccc
Q 004994 513 --HLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCG 590 (720)
Q Consensus 513 --~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFG 590 (720)
.++|+||++ ++|.+++.. ..+++.....++.++++||+|||+. +|+||||||+||++++++.+||+|||
T Consensus 93 ~~~~lv~e~~~-~~L~~~~~~-----~~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nill~~~~~~kL~dfg 163 (343)
T cd07851 93 QDVYLVTHLMG-ADLNNIVKC-----QKLSDDHIQFLVYQILRGLKYIHSA---GIIHRDLKPSNIAVNEDCELKILDFG 163 (343)
T ss_pred ccEEEEEecCC-CCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEcccc
Confidence 899999984 589888853 4588999999999999999999987 89999999999999999999999999
Q ss_pred CCCCCCCCCCcccccCccccccCCCCccCC--CCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchh-hhcc-----
Q 004994 591 LAPLLFSGSTNELSEGLLTAHGSGAPEFES--GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLV-RWAI----- 662 (720)
Q Consensus 591 la~~~~~~~~~~~~~~~~~~~~~~aPE~~~--~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~-~~~~----- 662 (720)
++...... .....++..|+|||... ..++.++|||||||++||++||+.||...........+ ....
T Consensus 164 ~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~ 238 (343)
T cd07851 164 LARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEE 238 (343)
T ss_pred cccccccc-----ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHH
Confidence 99865322 12235677899999873 35789999999999999999999999754332111100 0000
Q ss_pred --cccCch--hhhhhhcCCCCCchh---hHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 663 --PRLHDI--DALSRMVDPSLDGAY---LAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 663 --~~~~~~--~~~~~~~~~~~~~~~---~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
..+... ......+.......+ ....+.++.+++.+||+.||++|||+.||+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h 298 (343)
T cd07851 239 LLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAH 298 (343)
T ss_pred HHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcC
Confidence 000000 000000000000000 01124678899999999999999999999864
No 370
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=8.3e-33 Score=288.78 Aligned_cols=254 Identities=23% Similarity=0.259 Sum_probs=193.5
Q ss_pred CCCCCeeccCCCceEEEEEe----CCCcEEEEEEeccccc--ccccHHHHHHHHHHHHcc-CCCceeEEEeEeccCCeEE
Q 004994 442 FSEGNFIGEGLLGSVYKAEL----PGGKLLAVKKLSNTVS--QRQTDEEFLELASTISRL-RHGNIVELIGYCNEHGQHL 514 (720)
Q Consensus 442 ~~~~~~lg~G~~g~Vy~~~~----~~g~~vavK~l~~~~~--~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~ 514 (720)
|...+.||+|++|.||++.. .+++.||||.+++... .....+.+..|++++.++ +||||+++++.+......+
T Consensus 2 ~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~ 81 (288)
T cd05583 2 FELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLH 81 (288)
T ss_pred ceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEEE
Confidence 66678999999999999864 3578899999874321 123345788999999999 5999999999999999999
Q ss_pred EEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCC
Q 004994 515 LVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPL 594 (720)
Q Consensus 515 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~ 594 (720)
+||||+++++|.+++.. ...+++.....++.|+++||.|||+. +++||||||+||+++.++.++|+|||+++.
T Consensus 82 lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~ql~~~l~~lH~~---~~~H~dl~p~nil~~~~~~~~l~dfg~~~~ 154 (288)
T cd05583 82 LILDYVNGGELFTHLYQ----REHFTESEVRVYIAEIVLALDHLHQL---GIIYRDIKLENILLDSEGHVVLTDFGLSKE 154 (288)
T ss_pred EEEecCCCCcHHHHHhh----cCCcCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEEECccccc
Confidence 99999999999998853 24578888999999999999999987 899999999999999999999999999877
Q ss_pred CCCCCCcccccCccccccCCCCccCCC-C--CCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhh
Q 004994 595 LFSGSTNELSEGLLTAHGSGAPEFESG-S--YSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDAL 671 (720)
Q Consensus 595 ~~~~~~~~~~~~~~~~~~~~aPE~~~~-~--~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (720)
+..... .......++..|++||...+ . .+.++||||||+++|||+||+.||......... . +..
T Consensus 155 ~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~--~----------~~~ 221 (288)
T cd05583 155 FLAEEE-ERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQ--S----------EIS 221 (288)
T ss_pred cccccc-cccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchH--H----------HHH
Confidence 543221 11223456788999998743 2 688999999999999999999999643211100 0 000
Q ss_pred hhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 004994 672 SRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLL 717 (720)
Q Consensus 672 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 717 (720)
..+..... ..+......+.+++.+||+.||++|||+.++.+.|+
T Consensus 222 ~~~~~~~~--~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~ 265 (288)
T cd05583 222 RRILKSKP--PFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKN 265 (288)
T ss_pred HHHHccCC--CCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhc
Confidence 00000000 011123356789999999999999999887766554
No 371
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.9e-33 Score=269.53 Aligned_cols=266 Identities=21% Similarity=0.299 Sum_probs=202.9
Q ss_pred CHHHHHHHhcCCCCCCeeccCCCceEEEE-EeCCCcEEEEEEecccccccccHHHHHHHHHHHHcc-CCCceeEEEeEec
Q 004994 431 TIASLQQYTNSFSEGNFIGEGLLGSVYKA-ELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRL-RHGNIVELIGYCN 508 (720)
Q Consensus 431 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~-~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~ 508 (720)
.+++..+.|. +.||+|+|+.|--+ .+.+|..||||++.+. .........+|++++... .|+||+.++++|+
T Consensus 74 ~F~d~YkLt~-----e~LGeGAyasVqtcv~i~t~~EYAVKiidKq--~gHsR~RvfREVe~f~~Cqgh~nilqLiefFE 146 (463)
T KOG0607|consen 74 KFEDMYKLTS-----ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQ--PGHSRSRVFREVETFYQCQGHKNILQLIEFFE 146 (463)
T ss_pred hHHHHHHhHH-----HHhcCccceeeeeeeeeccchhhhhhhhhcC--CchHHHHHHHHHHHHHHhcCCccHHHHHHHhc
Confidence 4677777775 78999999999988 6789999999999754 234556778999999988 6999999999999
Q ss_pred cCCeEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCC---CeE
Q 004994 509 EHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKL---IVR 585 (720)
Q Consensus 509 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~---~~k 585 (720)
++..+|||||-|.||.|...++. ++.|++.+..++..+||.||.|||.. +|.|||+||+|||..... -+|
T Consensus 147 dd~~FYLVfEKm~GGplLshI~~----~~~F~E~EAs~vvkdia~aLdFlH~k---gIAHRDlKPENiLC~~pn~vsPvK 219 (463)
T KOG0607|consen 147 DDTRFYLVFEKMRGGPLLSHIQK----RKHFNEREASRVVKDIASALDFLHTK---GIAHRDLKPENILCESPNKVSPVK 219 (463)
T ss_pred ccceEEEEEecccCchHHHHHHH----hhhccHHHHHHHHHHHHHHHHHHhhc---CcccccCCccceeecCCCCcCcee
Confidence 99999999999999999988853 46788999999999999999999998 999999999999997554 479
Q ss_pred EccccCCCCCCCCCC-cccc----cCccccccCCCCccC---CC---CCCCccchHhHHHHHHHHHhCCCCCCCCCCccc
Q 004994 586 VSDCGLAPLLFSGST-NELS----EGLLTAHGSGAPEFE---SG---SYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGE 654 (720)
Q Consensus 586 l~DFGla~~~~~~~~-~~~~----~~~~~~~~~~aPE~~---~~---~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~ 654 (720)
||||.++..+..... ...+ -.-.|+..|||||+. .+ .|+.++|.||+|||+|-|+.|.+||.+.-..+-
T Consensus 220 iCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dC 299 (463)
T KOG0607|consen 220 ICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADC 299 (463)
T ss_pred eeccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcC
Confidence 999998754321110 0111 123466789999975 22 489999999999999999999999975432211
Q ss_pred cchhhhcccccC---chhhhhhhcC--CCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 004994 655 QSLVRWAIPRLH---DIDALSRMVD--PSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQ 714 (720)
Q Consensus 655 ~~~~~~~~~~~~---~~~~~~~~~~--~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 714 (720)
-|...+.= ...-+..+-+ ..+++..+...+.+..+++...+..|+.+|-++.++++
T Consensus 300 ----GWdrGe~Cr~CQ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vln 360 (463)
T KOG0607|consen 300 ----GWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLN 360 (463)
T ss_pred ----CccCCCccHHHHHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccC
Confidence 11111110 0011122222 22334455667788999999999999999999999886
No 372
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1e-34 Score=273.05 Aligned_cols=268 Identities=21% Similarity=0.334 Sum_probs=199.3
Q ss_pred CCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEecc--------CC
Q 004994 441 SFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNE--------HG 511 (720)
Q Consensus 441 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~--------~~ 511 (720)
.|....+||+|.||+||+|+. ++|+.||+|++-.+...........+|++++..++|+|++.+++.|.. ..
T Consensus 18 ~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~ 97 (376)
T KOG0669|consen 18 KYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRA 97 (376)
T ss_pred HHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccc
Confidence 345567899999999999965 568889999876544445666778899999999999999999998853 23
Q ss_pred eEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccC
Q 004994 512 QHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGL 591 (720)
Q Consensus 512 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGl 591 (720)
.+|+||++|+. +|.-++... ...++..++.+++.++..||.|+|.. .|+|||+||+|+||+.++.+||+|||+
T Consensus 98 t~ylVf~~ceh-DLaGlLsn~---~vr~sls~Ikk~Mk~Lm~GL~~iHr~---kilHRDmKaaNvLIt~dgilklADFGl 170 (376)
T KOG0669|consen 98 TFYLVFDFCEH-DLAGLLSNR---KVRFSLSEIKKVMKGLMNGLYYIHRN---KILHRDMKAANVLITKDGILKLADFGL 170 (376)
T ss_pred eeeeeHHHhhh-hHHHHhcCc---cccccHHHHHHHHHHHHHHHHHHHHh---hHHhhcccHhhEEEcCCceEEeecccc
Confidence 58999999997 788877532 35688889999999999999999997 899999999999999999999999999
Q ss_pred CCCCCCCCCcc--cccCccccccCCCCccCC--CCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhh--------
Q 004994 592 APLLFSGSTNE--LSEGLLTAHGSGAPEFES--GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVR-------- 659 (720)
Q Consensus 592 a~~~~~~~~~~--~~~~~~~~~~~~aPE~~~--~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~-------- 659 (720)
|+.+....... ......-|.+|++||.+- .+|+.+.|||.-||||.||+||.+-+....+.....+++
T Consensus 171 ar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tk 250 (376)
T KOG0669|consen 171 ARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITK 250 (376)
T ss_pred ccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCc
Confidence 98764332211 112234488999999983 479999999999999999999998887655433322222
Q ss_pred hcccccCchhhhhhhc-CCCCCchhh--HHH------HHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 660 WAIPRLHDIDALSRMV-DPSLDGAYL--AKS------LSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 660 ~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~------~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.++|.....+-...+- .|...+.+. .+. .++..+|+.+++..||.+|+++.+++.|
T Consensus 251 evWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh 315 (376)
T KOG0669|consen 251 EVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNH 315 (376)
T ss_pred ccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhch
Confidence 2223222222111111 111111110 000 1367799999999999999999999865
No 373
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-33 Score=274.58 Aligned_cols=248 Identities=22% Similarity=0.270 Sum_probs=197.6
Q ss_pred cCCCCCCeeccCCCceEEEEE-eCCCcEEEEEEecccccc-cccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAE-LPGGKLLAVKKLSNTVSQ-RQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVY 517 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 517 (720)
++|...++||+|.||+|..++ ..+|+.||+|++++++.- +.....-..|-++|+..+||.+..+.-.|...+++++||
T Consensus 168 ~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFVM 247 (516)
T KOG0690|consen 168 EDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFVM 247 (516)
T ss_pred chhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEEE
Confidence 567778999999999999994 567999999999887543 333344567889999999999999999999999999999
Q ss_pred eeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCC
Q 004994 518 DYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFS 597 (720)
Q Consensus 518 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~ 597 (720)
||..||.|.-.|.. .+.++.....-+-..|..||.|||+. +||+||||.+|.|+|+||++||+|||+++.-
T Consensus 248 eyanGGeLf~HLsr----er~FsE~RtRFYGaEIvsAL~YLHs~---~ivYRDlKLENLlLDkDGHIKitDFGLCKE~-- 318 (516)
T KOG0690|consen 248 EYANGGELFFHLSR----ERVFSEDRTRFYGAEIVSALGYLHSR---NIVYRDLKLENLLLDKDGHIKITDFGLCKEE-- 318 (516)
T ss_pred EEccCceEeeehhh----hhcccchhhhhhhHHHHHHhhhhhhC---CeeeeechhhhheeccCCceEeeecccchhc--
Confidence 99999999877743 45677766667778899999999997 9999999999999999999999999999753
Q ss_pred CCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcC
Q 004994 598 GSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVD 676 (720)
Q Consensus 598 ~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (720)
-..........||+.|.|||++ ...|+.++|+|.+|||||||+.|+.||-..+...-..++ .-
T Consensus 319 I~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLI----------------l~ 382 (516)
T KOG0690|consen 319 IKYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELI----------------LM 382 (516)
T ss_pred ccccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHHH----------------Hh
Confidence 2334455668899999999999 567999999999999999999999999654322111111 00
Q ss_pred CCCCchhhHHHHHHHHHHHHHHhccCCCCCC-----CHHHHHH
Q 004994 677 PSLDGAYLAKSLSRFADIISRCVQWEPGFRP-----PMSEIVQ 714 (720)
Q Consensus 677 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~evl~ 714 (720)
.. -.++....++...|+...|.+||.+|. .+.||.+
T Consensus 383 ed--~kFPr~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~ 423 (516)
T KOG0690|consen 383 ED--LKFPRTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMR 423 (516)
T ss_pred hh--ccCCccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHh
Confidence 00 113334446788999999999999994 4555544
No 374
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=1.1e-32 Score=295.09 Aligned_cols=266 Identities=21% Similarity=0.299 Sum_probs=190.4
Q ss_pred hcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccC-------
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEH------- 510 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~------- 510 (720)
..+|...+.||+|+||.||+|.. .+|+.||+|.+.... ....+.+.+|++++++++||||+++++++...
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~--~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 81 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTD--PQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTED 81 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCC--CchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccc
Confidence 35788889999999999999955 568999999986432 24456788999999999999999999876543
Q ss_pred -------CeEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcC-CC
Q 004994 511 -------GQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDE-KL 582 (720)
Q Consensus 511 -------~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~-~~ 582 (720)
...++||||++ ++|.+++.. ..+++.....++.|+++||.|||+. +|+||||||+||+++. ++
T Consensus 82 ~~~~~~~~~~~lv~e~~~-~~L~~~~~~-----~~l~~~~~~~~~~qi~~aL~~LH~~---givH~dikp~Nili~~~~~ 152 (342)
T cd07854 82 VGSLTELNSVYIVQEYME-TDLANVLEQ-----GPLSEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANVFINTEDL 152 (342)
T ss_pred cccccccceEEEEeeccc-ccHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCc
Confidence 35789999998 488887742 3578899999999999999999987 8999999999999974 56
Q ss_pred CeEEccccCCCCCCCCCCcc-cccCccccccCCCCccC-C-CCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhh
Q 004994 583 IVRVSDCGLAPLLFSGSTNE-LSEGLLTAHGSGAPEFE-S-GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVR 659 (720)
Q Consensus 583 ~~kl~DFGla~~~~~~~~~~-~~~~~~~~~~~~aPE~~-~-~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~ 659 (720)
.+|++|||+++.+....... ......++..|+|||.. . ..++.++|||||||++|||++|+.||....+........
T Consensus 153 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~ 232 (342)
T cd07854 153 VLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLIL 232 (342)
T ss_pred eEEECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 78999999997653221111 11123457789999976 3 357889999999999999999999997543322111111
Q ss_pred hcccccCc--hhhhh-----hhc----CCCCC-chhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 660 WAIPRLHD--IDALS-----RMV----DPSLD-GAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 660 ~~~~~~~~--~~~~~-----~~~----~~~~~-~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
...+.... ..... .+. .+... .........++.+++.+||+.||++|||++|++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h 300 (342)
T cd07854 233 ESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMH 300 (342)
T ss_pred HhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCC
Confidence 00000000 00000 000 00000 00011233568899999999999999999999854
No 375
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-33 Score=283.77 Aligned_cols=258 Identities=24% Similarity=0.343 Sum_probs=197.4
Q ss_pred cCCCCCCeeccCCCceEEEE-EeCCCcEEEEEEeccccc--c---cccHHHHHHHHHHHHccCCCceeEEEeEec-cCCe
Q 004994 440 NSFSEGNFIGEGLLGSVYKA-ELPGGKLLAVKKLSNTVS--Q---RQTDEEFLELASTISRLRHGNIVELIGYCN-EHGQ 512 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~-~~~~g~~vavK~l~~~~~--~---~~~~~~~~~e~~~l~~l~H~niv~l~~~~~-~~~~ 512 (720)
++|-...+||+|||+.|||| ++...+.||||+-..... + ....+...+|.++.+.|+||.||++|+|+. +.+.
T Consensus 463 ~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtds 542 (775)
T KOG1151|consen 463 DRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDS 542 (775)
T ss_pred HHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeecccc
Confidence 34555678999999999999 677889999998643221 1 122345688999999999999999999996 5678
Q ss_pred EEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEc---CCCCeEEccc
Q 004994 513 HLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLD---EKLIVRVSDC 589 (720)
Q Consensus 513 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~---~~~~~kl~DF 589 (720)
++-|.|||+|-+|.=+|. .++.++......|+++|+.||.||.+. .++|||-||||.|||+- ..|.+||+||
T Consensus 543 FCTVLEYceGNDLDFYLK----QhklmSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacGeIKITDF 617 (775)
T KOG1151|consen 543 FCTVLEYCEGNDLDFYLK----QHKLMSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACGEIKITDF 617 (775)
T ss_pred ceeeeeecCCCchhHHHH----hhhhhhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccceeEeeec
Confidence 899999999999988884 456788999999999999999999987 67899999999999994 4578999999
Q ss_pred cCCCCCCCCCCc-----ccccCccccccCCCCccC--C---CCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhh
Q 004994 590 GLAPLLFSGSTN-----ELSEGLLTAHGSGAPEFE--S---GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVR 659 (720)
Q Consensus 590 Gla~~~~~~~~~-----~~~~~~~~~~~~~aPE~~--~---~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~ 659 (720)
|+++++...++. ..+....||+||.+||.+ . ...+.|+||||.|||+|+.+.|+.||..... .+++..
T Consensus 618 GLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqs--QQdILq 695 (775)
T KOG1151|consen 618 GLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQS--QQDILQ 695 (775)
T ss_pred chhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchh--HHHHHh
Confidence 999999765544 234456789999999987 2 2478999999999999999999999975321 122222
Q ss_pred hcccccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 004994 660 WAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQ 714 (720)
Q Consensus 660 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 714 (720)
... +-....-.++ .-..+..+..++|.+||++.-++|....++..
T Consensus 696 eNT--------IlkAtEVqFP--~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~ 740 (775)
T KOG1151|consen 696 ENT--------ILKATEVQFP--PKPVVSSEAKAFIRRCLAYRKEDRIDVQQLAC 740 (775)
T ss_pred hhc--------hhcceeccCC--CCCccCHHHHHHHHHHHHhhhhhhhhHHHHcc
Confidence 110 0000000000 00123467789999999999999988877653
No 376
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-33 Score=287.63 Aligned_cols=246 Identities=21% Similarity=0.277 Sum_probs=199.5
Q ss_pred CCeeccCCCceEEEEE-eCCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEeeCCCC
Q 004994 445 GNFIGEGLLGSVYKAE-LPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDYGGNC 523 (720)
Q Consensus 445 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~g 523 (720)
.++||.|.||+||-|. .++|+.||||++.+.........+.+.|+.+|++++||.||.+...|+..+..+.|||-+.|.
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~GD 648 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHGD 648 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcch
Confidence 4899999999999995 468999999999877666667789999999999999999999999999999999999998875
Q ss_pred CHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcC---CCCeEEccccCCCCCCCCCC
Q 004994 524 TLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDE---KLIVRVSDCGLAPLLFSGST 600 (720)
Q Consensus 524 sL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~---~~~~kl~DFGla~~~~~~~~ 600 (720)
-|+-+|.. ....++.....-++.||..||.|||.. +|||+||||+|||+.. --++||||||+|+++++.
T Consensus 649 MLEMILSs---EkgRL~er~TkFlvtQIL~ALr~LH~k---nIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEk-- 720 (888)
T KOG4236|consen 649 MLEMILSS---EKGRLPERITKFLVTQILVALRYLHFK---NIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEK-- 720 (888)
T ss_pred HHHHHHHh---hcccchHHHHHHHHHHHHHHHHHhhhc---ceeeccCCchheeeccCCCCCceeeccccceeecchh--
Confidence 55555532 245677888888899999999999998 9999999999999954 348999999999998653
Q ss_pred cccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcCCCC
Q 004994 601 NELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSL 679 (720)
Q Consensus 601 ~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (720)
.+.....||+.|.|||.+ ...|+..-|+||.|||+|--+.|..||....+.. +.++-+ .-|..
T Consensus 721 -sFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIn--dQIQNA----------aFMyP--- 784 (888)
T KOG4236|consen 721 -SFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDIN--DQIQNA----------AFMYP--- 784 (888)
T ss_pred -hhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccchh--HHhhcc----------ccccC---
Confidence 355668899999999999 5679999999999999999999999996543221 111110 01111
Q ss_pred CchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 680 DGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 680 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
..-+.+...+..|||...|+..=.+|-+....+.+
T Consensus 785 -p~PW~eis~~AidlIn~LLqVkm~kRysvdk~lsh 819 (888)
T KOG4236|consen 785 -PNPWSEISPEAIDLINNLLQVKMRKRYSVDKSLSH 819 (888)
T ss_pred -CCchhhcCHHHHHHHHHHHHHHHHHhcchHhhccc
Confidence 12234556678899999999999999998876643
No 377
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.6e-33 Score=295.60 Aligned_cols=240 Identities=25% Similarity=0.295 Sum_probs=189.2
Q ss_pred HhcCCCCCCeeccCCCceEEEEE-eCCCcEEEEEEecccccccccHHHHHHHHHHHHcc-CCCceeEEEeEeccCCeEEE
Q 004994 438 YTNSFSEGNFIGEGLLGSVYKAE-LPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRL-RHGNIVELIGYCNEHGQHLL 515 (720)
Q Consensus 438 ~~~~~~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~l 515 (720)
+++.|.....+|.|+|+.|-++. ..+++..+||++.+... +-.+|+.++... +||||+++.+.+.+..+.|+
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~------~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~ 393 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRAD------DNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYL 393 (612)
T ss_pred cchhhccccccCCCCccceeeeeccccccchhheecccccc------ccccccchhhhhcCCCcceeecceecCCceeee
Confidence 46677777889999999998884 56789999999976521 233455555444 79999999999999999999
Q ss_pred EEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEE-cCCCCeEEccccCCCC
Q 004994 516 VYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILL-DEKLIVRVSDCGLAPL 594 (720)
Q Consensus 516 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl-~~~~~~kl~DFGla~~ 594 (720)
|||++.++-+.+.+... +.+. ..+..|+.+++.|+.|||.. +||||||||+|||+ +..++++|+|||.++.
T Consensus 394 v~e~l~g~ell~ri~~~----~~~~-~e~~~w~~~lv~Av~~LH~~---gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~ 465 (612)
T KOG0603|consen 394 VMELLDGGELLRRIRSK----PEFC-SEASQWAAELVSAVDYLHEQ---GVVHRDLKPGNILLDGSAGHLRLTYFGFWSE 465 (612)
T ss_pred eehhccccHHHHHHHhc----chhH-HHHHHHHHHHHHHHHHHHhc---CeeecCCChhheeecCCCCcEEEEEechhhh
Confidence 99999999888776432 2333 66778999999999999996 99999999999999 6999999999999988
Q ss_pred CCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhh
Q 004994 595 LFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSR 673 (720)
Q Consensus 595 ~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (720)
+... ...-.-|..|.|||+. ...|++++||||||++||||++|+.||...... .+...+
T Consensus 466 ~~~~-----~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~---------------~ei~~~ 525 (612)
T KOG0603|consen 466 LERS-----CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG---------------IEIHTR 525 (612)
T ss_pred Cchh-----hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch---------------HHHHHh
Confidence 7543 1112346789999999 457999999999999999999999999653221 112222
Q ss_pred hcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 674 MVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 674 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
+..+.. ....+.++.+|+..||+.||.+||+|.++..+
T Consensus 526 i~~~~~----s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h 563 (612)
T KOG0603|consen 526 IQMPKF----SECVSDEAKDLLQQLLQVDPALRLGADEIGAH 563 (612)
T ss_pred hcCCcc----ccccCHHHHHHHHHhccCChhhCcChhhhccC
Confidence 222222 13456788999999999999999999998764
No 378
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-33 Score=314.24 Aligned_cols=259 Identities=22% Similarity=0.259 Sum_probs=203.1
Q ss_pred HHHHHHHhcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEeccc-ccccccHHHHHHHHHHHHccCCCceeEEEeEecc
Q 004994 432 IASLQQYTNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNT-VSQRQTDEEFLELASTISRLRHGNIVELIGYCNE 509 (720)
Q Consensus 432 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~-~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~ 509 (720)
+.++.--.++|.+.++||+|+||.|..+++ .+++.||+|++.+- ...+.....|++|-++|..-+.+.||.+.-.|.+
T Consensus 67 v~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD 146 (1317)
T KOG0612|consen 67 VKELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQD 146 (1317)
T ss_pred HHHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcC
Confidence 344555568899999999999999999966 56899999999762 2335566789999999999999999999999999
Q ss_pred CCeEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccc
Q 004994 510 HGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDC 589 (720)
Q Consensus 510 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DF 589 (720)
..++|+|||||+||+|-.++.... .++......++..+.-||.-||+. |+|||||||+|||||..|++||+||
T Consensus 147 ~~~LYlVMdY~pGGDlltLlSk~~----~~pE~~ArFY~aEiVlAldslH~m---gyVHRDiKPDNvLld~~GHikLADF 219 (1317)
T KOG0612|consen 147 ERYLYLVMDYMPGGDLLTLLSKFD----RLPEDWARFYTAEIVLALDSLHSM---GYVHRDIKPDNVLLDKSGHIKLADF 219 (1317)
T ss_pred ccceEEEEecccCchHHHHHhhcC----CChHHHHHHHHHHHHHHHHHHHhc---cceeccCCcceeEecccCcEeeccc
Confidence 999999999999999999996432 466666667778888899999988 9999999999999999999999999
Q ss_pred cCCCCCCCCCCcccccCccccccCCCCccC-----C-CCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhccc
Q 004994 590 GLAPLLFSGSTNELSEGLLTAHGSGAPEFE-----S-GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIP 663 (720)
Q Consensus 590 Gla~~~~~~~~~~~~~~~~~~~~~~aPE~~-----~-~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~ 663 (720)
|.+-.+...+ ...+....||+-|.+||++ . |.|+..+|+||+||++|||+.|..||-... ++.
T Consensus 220 GsClkm~~dG-~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYads------lve---- 288 (1317)
T KOG0612|consen 220 GSCLKMDADG-TVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADS------LVE---- 288 (1317)
T ss_pred hhHHhcCCCC-cEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHH------HHH----
Confidence 9887665333 3345667899999999986 2 569999999999999999999999995422 111
Q ss_pred ccCchhhhhhhcCCCCCchhh--HHHHHHHHHHHHHHhccCCCCCCC---HHHHHHH
Q 004994 664 RLHDIDALSRMVDPSLDGAYL--AKSLSRFADIISRCVQWEPGFRPP---MSEIVQD 715 (720)
Q Consensus 664 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~l~~~cl~~dP~~RPt---~~evl~~ 715 (720)
.+.++++-.-.-.+| .+++++..+||.+.+. +|+.|.. ++++-.|
T Consensus 289 ------TY~KIm~hk~~l~FP~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~H 338 (1317)
T KOG0612|consen 289 ------TYGKIMNHKESLSFPDETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNH 338 (1317)
T ss_pred ------HHHHHhchhhhcCCCcccccCHHHHHHHHHHhc-ChhhhcccccHHHHHhC
Confidence 122222221111122 2356788899988775 5667776 7776544
No 379
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=4.1e-32 Score=277.05 Aligned_cols=240 Identities=28% Similarity=0.349 Sum_probs=190.0
Q ss_pred eccCCCceEEEEEeC-CCcEEEEEEecccccc-cccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEeeCCCCCH
Q 004994 448 IGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQ-RQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDYGGNCTL 525 (720)
Q Consensus 448 lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL 525 (720)
||+|+||.||++... +++.||+|.+.+.... ......+..|++++++++|+||+++++.+...+..++||||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 689999999999664 5899999998754322 23456788999999999999999999999999999999999999999
Q ss_pred HHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCCCccccc
Q 004994 526 HDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSE 605 (720)
Q Consensus 526 ~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~~~~~ 605 (720)
.+++... ..+++.....++.++++||.|||+. +++|+||||+||+++.++.++|+|||++....... ....
T Consensus 81 ~~~l~~~----~~l~~~~~~~~~~qi~~~l~~lh~~---~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~--~~~~ 151 (250)
T cd05123 81 FSHLSKE----GRFSEERARFYAAEIVLALEYLHSL---GIIYRDLKPENILLDADGHIKLTDFGLAKELSSEG--SRTN 151 (250)
T ss_pred HHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcceEEEcCCCcEEEeecCcceecccCC--Cccc
Confidence 9998532 3578999999999999999999986 99999999999999999999999999997664321 1223
Q ss_pred CccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcCCCCCchhh
Q 004994 606 GLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDGAYL 684 (720)
Q Consensus 606 ~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 684 (720)
...++..|++||.. ....+.++|+||||+++||+++|+.||....... ... .+..... ..+
T Consensus 152 ~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~---~~~-------------~~~~~~~--~~~ 213 (250)
T cd05123 152 TFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKE---IYE-------------KILKDPL--RFP 213 (250)
T ss_pred CCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHH---HHH-------------HHhcCCC--CCC
Confidence 34567789999988 4457889999999999999999999996533211 011 1110000 011
Q ss_pred HHHHHHHHHHHHHHhccCCCCCCCH---HHHHH
Q 004994 685 AKSLSRFADIISRCVQWEPGFRPPM---SEIVQ 714 (720)
Q Consensus 685 ~~~~~~l~~l~~~cl~~dP~~RPt~---~evl~ 714 (720)
...+..+.+++.+||..||++||++ +++++
T Consensus 214 ~~~~~~l~~~i~~~l~~~p~~R~~~~~~~~l~~ 246 (250)
T cd05123 214 EFLSPEARDLISGLLQKDPTKRLGSGGAEEIKA 246 (250)
T ss_pred CCCCHHHHHHHHHHhcCCHhhCCCcccHHHHHh
Confidence 1224567899999999999999999 56554
No 380
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-32 Score=297.70 Aligned_cols=259 Identities=25% Similarity=0.371 Sum_probs=210.3
Q ss_pred HHHHHHHhcCCCCCCeeccCCCceEEEEE-eCCCcEEEEEEecccccccccHHHHHHHHHHHHcc-CCCceeEEEeEec-
Q 004994 432 IASLQQYTNSFSEGNFIGEGLLGSVYKAE-LPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRL-RHGNIVELIGYCN- 508 (720)
Q Consensus 432 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~- 508 (720)
++.+...+.-|++.++||.|.+|.||++. .++++..|+|++.... ..+++...|.++++.. .|||++.+||++.
T Consensus 11 ~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~---d~deEiE~eynil~~~~~hpnv~~fyg~~~k 87 (953)
T KOG0587|consen 11 LSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTE---DEEEEIELEYNMLKKYSHHPNVATFYGAFIK 87 (953)
T ss_pred hhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCc---cccHHHHHHHHHHHhccCCCCcceEEEEEEE
Confidence 34444456678888999999999999994 5689999999987543 4456677888898887 7999999999884
Q ss_pred ----cCCeEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCe
Q 004994 509 ----EHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIV 584 (720)
Q Consensus 509 ----~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~ 584 (720)
.+++++||||||.+||..|+++... ...+.|..+..|+..+.+||++||.. .++|||||-.|||++.++.|
T Consensus 88 ~~~~~~DqLWLVMEfC~gGSVTDLVKn~~--g~rl~E~~IaYI~re~lrgl~HLH~n---kviHRDikG~NiLLT~e~~V 162 (953)
T KOG0587|consen 88 KDPGNGDQLWLVMEFCGGGSVTDLVKNTK--GNRLKEEWIAYILREILRGLAHLHNN---KVIHRDIKGQNVLLTENAEV 162 (953)
T ss_pred ecCCCCCeEEEEeeccCCccHHHHHhhhc--ccchhhHHHHHHHHHHHHHHHHHhhc---ceeeecccCceEEEeccCcE
Confidence 4679999999999999999997654 56789999999999999999999987 89999999999999999999
Q ss_pred EEccccCCCCCCCCCCcccccCccccccCCCCccCC------CCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchh
Q 004994 585 RVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFES------GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLV 658 (720)
Q Consensus 585 kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~------~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~ 658 (720)
|+.|||++..+.. +........||+.|||||.+. ..|+.++|+||+|++..||--|.+|+.+..+.-....+
T Consensus 163 KLvDFGvSaQlds--T~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF~I 240 (953)
T KOG0587|consen 163 KLVDFGVSAQLDS--TVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFLI 240 (953)
T ss_pred EEeeeeeeeeeec--ccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhccC
Confidence 9999999988743 233345578999999999872 23788999999999999999999999765542211100
Q ss_pred hhcccccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 659 RWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 659 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
. ..|...-..+....++|.+++..||.+|-++||++.++++|
T Consensus 241 -------------p--RNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~h 282 (953)
T KOG0587|consen 241 -------------P--RNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKH 282 (953)
T ss_pred -------------C--CCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhccC
Confidence 0 11222223466778899999999999999999999999865
No 381
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.98 E-value=4.6e-32 Score=312.80 Aligned_cols=147 Identities=23% Similarity=0.302 Sum_probs=129.6
Q ss_pred cCCCCCCeeccCCCceEEEEEeC-CCcEEEEEEecccc-cccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTV-SQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVY 517 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~-~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 517 (720)
++|...+.||+|+||+||+|... +++.||||+++... ......+.+..|+++++.++|+||+++++++...+..++||
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVm 83 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVM 83 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEE
Confidence 56788899999999999999664 68999999997432 22334467889999999999999999999999999999999
Q ss_pred eeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCC
Q 004994 518 DYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAP 593 (720)
Q Consensus 518 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~ 593 (720)
||+.+++|.+++.. ...+++.....++.+++.||.|||.. +||||||||+|||++.++.+||+|||+++
T Consensus 84 Ey~~g~~L~~li~~----~~~l~~~~~~~i~~qil~aL~yLH~~---gIiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 84 EYLIGGDVKSLLHI----YGYFDEEMAVKYISEVALALDYLHRH---GIIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred eCCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 99999999999853 23578888999999999999999987 99999999999999999999999999986
No 382
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.98 E-value=6.8e-32 Score=273.43 Aligned_cols=218 Identities=20% Similarity=0.195 Sum_probs=171.1
Q ss_pred CCCceEEEEE-eCCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEeeCCCCCHHHHh
Q 004994 451 GLLGSVYKAE-LPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLL 529 (720)
Q Consensus 451 G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l 529 (720)
|.+|.||++. ..+++.||+|++.... .+..|...+....||||+++++++.+.+..++||||+++|+|.+++
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l 76 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-------EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHI 76 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-------hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHH
Confidence 8999999995 4678999999996532 2334445555567999999999999999999999999999999988
Q ss_pred hccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCCCcccccCccc
Q 004994 530 HSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLT 609 (720)
Q Consensus 530 ~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~ 609 (720)
.. ...+++.....++.++++||.|||+. +|+||||||+||+++.++.++++|||.+..+.... ....+
T Consensus 77 ~~----~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~-----~~~~~ 144 (237)
T cd05576 77 SK----FLNIPEECVKRWAAEMVVALDALHRE---GIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSC-----DGEAV 144 (237)
T ss_pred HH----hcCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCEEEecccchhcccccc-----ccCCc
Confidence 53 23588999999999999999999987 89999999999999999999999999886653321 12334
Q ss_pred cccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcCCCCCchhhHHHH
Q 004994 610 AHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDGAYLAKSL 688 (720)
Q Consensus 610 ~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 688 (720)
+..|+|||.. .+.++.++||||+||++|||++|+.|+..... ...... ...+ +....
T Consensus 145 ~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~-~~~~~~-----------------~~~~----~~~~~ 202 (237)
T cd05576 145 ENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPS-GINTHT-----------------TLNI----PEWVS 202 (237)
T ss_pred CccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCch-hccccc-----------------ccCC----cccCC
Confidence 5679999988 45689999999999999999999988753211 000000 0000 11123
Q ss_pred HHHHHHHHHHhccCCCCCCCH
Q 004994 689 SRFADIISRCVQWEPGFRPPM 709 (720)
Q Consensus 689 ~~l~~l~~~cl~~dP~~RPt~ 709 (720)
..+.+++.+|++.||++||++
T Consensus 203 ~~~~~li~~~l~~dp~~R~~~ 223 (237)
T cd05576 203 EEARSLLQQLLQFNPTERLGA 223 (237)
T ss_pred HHHHHHHHHHccCCHHHhcCC
Confidence 567899999999999999997
No 383
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.97 E-value=1.7e-32 Score=273.62 Aligned_cols=264 Identities=18% Similarity=0.305 Sum_probs=200.5
Q ss_pred HhcCCCCCCeeccCCCceEEEE-EeCCCcEEEEEEecccccccccHHHHHHHHHHHHccCC--C----ceeEEEeEeccC
Q 004994 438 YTNSFSEGNFIGEGLLGSVYKA-ELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRH--G----NIVELIGYCNEH 510 (720)
Q Consensus 438 ~~~~~~~~~~lg~G~~g~Vy~~-~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H--~----niv~l~~~~~~~ 510 (720)
.+++|.+.+.+|+|.||.|-++ +.+.+..||||+++.- ....+..+-|+++++++.+ | -+|.+.+||+-.
T Consensus 87 l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V---~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyr 163 (415)
T KOG0671|consen 87 LTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNV---DKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYR 163 (415)
T ss_pred cccceehhhhhcCCcccceEEEeecCCCceehHHHHHHH---HHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhcc
Confidence 4788999999999999999999 4556899999999742 3455677889999999943 2 478888999999
Q ss_pred CeEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcC----------
Q 004994 511 GQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDE---------- 580 (720)
Q Consensus 511 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~---------- 580 (720)
++.++|+|.++- |+.+++... ...+++...+..|+.|+.++++|||+. +++|-||||+|||+.+
T Consensus 164 ghiCivfellG~-S~~dFlk~N--~y~~fpi~~ir~m~~QL~~sv~fLh~~---kl~HTDLKPENILfvss~~~~~~~~k 237 (415)
T KOG0671|consen 164 GHICIVFELLGL-STFDFLKEN--NYIPFPIDHIRHMGYQLLESVAFLHDL---KLTHTDLKPENILFVSSEYFKTYNPK 237 (415)
T ss_pred CceEEEEeccCh-hHHHHhccC--CccccchHHHHHHHHHHHHHHHHHHhc---ceeecCCChheEEEeccceEEEeccC
Confidence 999999999754 899999753 346788899999999999999999998 9999999999999932
Q ss_pred ----------CCCeEEccccCCCCCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCC
Q 004994 581 ----------KLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRS 649 (720)
Q Consensus 581 ----------~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~ 649 (720)
+..+||+|||.|+.-.. ....+..|..|+|||++ +-..+..+||||+||||.|+.||..-|...
T Consensus 238 ~~~~~~r~~ks~~I~vIDFGsAtf~~e-----~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtH 312 (415)
T KOG0671|consen 238 KKVCFIRPLKSTAIKVIDFGSATFDHE-----HHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTH 312 (415)
T ss_pred CccceeccCCCcceEEEecCCcceecc-----CcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccC
Confidence 34689999999986532 23557789999999998 447999999999999999999999999765
Q ss_pred CCccccchhhhcccccCchhh------------------------hhhhcCCCCC-c---hhhHHHHHHHHHHHHHHhcc
Q 004994 650 RPRGEQSLVRWAIPRLHDIDA------------------------LSRMVDPSLD-G---AYLAKSLSRFADIISRCVQW 701 (720)
Q Consensus 650 ~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~-~---~~~~~~~~~l~~l~~~cl~~ 701 (720)
+..+.....+.....++.... ...+.++-.+ . .....+..++.||+.++|..
T Consensus 313 en~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~f 392 (415)
T KOG0671|consen 313 ENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEF 392 (415)
T ss_pred CcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHcc
Confidence 543332222222111110000 0000110000 0 11233456799999999999
Q ss_pred CCCCCCCHHHHHHH
Q 004994 702 EPGFRPPMSEIVQD 715 (720)
Q Consensus 702 dP~~RPt~~evl~~ 715 (720)
||.+|+|+.|++++
T Consensus 393 DP~~RiTl~EAL~H 406 (415)
T KOG0671|consen 393 DPARRITLREALSH 406 (415)
T ss_pred CccccccHHHHhcC
Confidence 99999999999875
No 384
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=2.7e-32 Score=272.70 Aligned_cols=241 Identities=20% Similarity=0.267 Sum_probs=191.1
Q ss_pred cCCCCCCeeccCCCceEEEEEeC-CCcEEEEEEecccccccccH-HHHHHHHHHHHcc-CCCceeEEEeEeccCCeEEEE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQRQTD-EEFLELASTISRL-RHGNIVELIGYCNEHGQHLLV 516 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~-~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv 516 (720)
.+|....+||+|+||+|-.|+.+ +.+.||||++++.+.-..++ +--+.|-++|... +-|.++++..+|..-+.+|.|
T Consensus 349 tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFV 428 (683)
T KOG0696|consen 349 TDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFV 428 (683)
T ss_pred cccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeE
Confidence 46778899999999999999654 57889999999876544333 3334555666655 568999999999999999999
Q ss_pred EeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCC
Q 004994 517 YDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLF 596 (720)
Q Consensus 517 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~ 596 (720)
|||+.+|+|.-.++. -..+.+....-+|..||-||-|||+. +||+||||.+|||+|.+|++||+|||+++.--
T Consensus 429 MEyvnGGDLMyhiQQ----~GkFKEp~AvFYAaEiaigLFFLh~k---gIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni 501 (683)
T KOG0696|consen 429 MEYVNGGDLMYHIQQ----VGKFKEPVAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENI 501 (683)
T ss_pred EEEecCchhhhHHHH----hcccCCchhhhhhHHHHHHhhhhhcC---CeeeeeccccceEeccCCceEeeecccccccc
Confidence 999999999887753 34566677888999999999999987 99999999999999999999999999997532
Q ss_pred CCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhc
Q 004994 597 SGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMV 675 (720)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (720)
- ....+....||+.|+|||++ -.+|+..+|+|||||+||||+.|++||++.++.+ ....+.
T Consensus 502 ~--~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~e----------------lF~aI~ 563 (683)
T KOG0696|consen 502 F--DGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDE----------------LFQAIM 563 (683)
T ss_pred c--CCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHH----------------HHHHHH
Confidence 2 12344567899999999998 6789999999999999999999999998754322 111111
Q ss_pred CCCCCchhhHHHHHHHHHHHHHHhccCCCCCC
Q 004994 676 DPSLDGAYLAKSLSRFADIISRCVQWEPGFRP 707 (720)
Q Consensus 676 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP 707 (720)
+.. -.|+...+.+..++.+..+.+.|.+|.
T Consensus 564 ehn--vsyPKslSkEAv~ickg~ltK~P~kRL 593 (683)
T KOG0696|consen 564 EHN--VSYPKSLSKEAVAICKGLLTKHPGKRL 593 (683)
T ss_pred Hcc--CcCcccccHHHHHHHHHHhhcCCcccc
Confidence 111 124445556778999999999999995
No 385
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.97 E-value=1.1e-31 Score=245.88 Aligned_cols=202 Identities=24% Similarity=0.341 Sum_probs=165.1
Q ss_pred cCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHcc-CCCceeEEEeEeccCCeEEEEE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRL-RHGNIVELIGYCNEHGQHLLVY 517 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv~ 517 (720)
++......||+|++|.|-+-++ .+|...|+|+++.... .+..++..+|+++..+. ..|.+|.+||.+...+..++.|
T Consensus 46 d~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn-~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcM 124 (282)
T KOG0984|consen 46 DDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVN-SQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICM 124 (282)
T ss_pred hhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcC-hHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeH
Confidence 3444567799999999988855 5799999999986543 34456677777776554 7999999999999999999999
Q ss_pred eeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCC
Q 004994 518 DYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFS 597 (720)
Q Consensus 518 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~ 597 (720)
|.|.- ||..+...--.....+++...-+||..+.+||.|||+.- .|||||+||+|||++.+|++|+||||++-.+.+
T Consensus 125 E~M~t-Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL--~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~d 201 (282)
T KOG0984|consen 125 ELMDT-SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKL--SVIHRDVKPSNILINYDGQVKICDFGISGYLVD 201 (282)
T ss_pred HHhhh-hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHh--hhhhccCCcceEEEccCCcEEEcccccceeehh
Confidence 99986 777776554455677888889999999999999999973 799999999999999999999999999987754
Q ss_pred CCCcccccCccccccCCCCccCCC-----CCCCccchHhHHHHHHHHHhCCCCCCC
Q 004994 598 GSTNELSEGLLTAHGSGAPEFESG-----SYSCQSDVYSLGVVMLELLTGRKPYDR 648 (720)
Q Consensus 598 ~~~~~~~~~~~~~~~~~aPE~~~~-----~~~~~~Dv~S~Gvvl~elltG~~Pf~~ 648 (720)
+-... ...|-..|+|||.+.+ .|+.|+||||+|+.+.||.+++.||+.
T Consensus 202 SiAkt---~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~ 254 (282)
T KOG0984|consen 202 SIAKT---MDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYES 254 (282)
T ss_pred hhHHH---HhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccc
Confidence 32111 1345567999998732 489999999999999999999999974
No 386
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.97 E-value=6.4e-31 Score=295.80 Aligned_cols=264 Identities=22% Similarity=0.261 Sum_probs=168.7
Q ss_pred HhcCCCCCCeeccCCCceEEEEEe-CC----CcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeE------
Q 004994 438 YTNSFSEGNFIGEGLLGSVYKAEL-PG----GKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGY------ 506 (720)
Q Consensus 438 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~----g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~------ 506 (720)
..++|...+.||+|+||.||+|.. .+ +..||||++.... ..+.+..+ .+++..+.+++.++..
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~----~~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~ 203 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYG----AVEIWMNE--RVRRACPNSCADFVYGFLEPVS 203 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccc----hhHHHHHH--HHHhhchhhHHHHHHhhhcccc
Confidence 456889999999999999999966 45 7899999986421 11222211 2222223333322211
Q ss_pred eccCCeEEEEEeeCCCCCHHHHhhccchh----------------ccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecC
Q 004994 507 CNEHGQHLLVYDYGGNCTLHDLLHSDEEA----------------HKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGN 570 (720)
Q Consensus 507 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~----------------~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrD 570 (720)
+.+.++.++||||+++++|.+++...... ...........++.|+++||+|||+. +|||||
T Consensus 204 ~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~---gIiHRD 280 (566)
T PLN03225 204 SKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHST---GIVHRD 280 (566)
T ss_pred cccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHC---CEEeCc
Confidence 24566899999999999999998643210 00112234567899999999999987 899999
Q ss_pred CCCCCeEEcC-CCCeEEccccCCCCCCCCCCcccccCccccccCCCCccC-CC----------------------CCCCc
Q 004994 571 FKSSNILLDE-KLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE-SG----------------------SYSCQ 626 (720)
Q Consensus 571 lkp~NiLl~~-~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~----------------------~~~~~ 626 (720)
|||+|||++. ++.+||+|||+|+.+.... ........+++.|+|||.+ .. .++.+
T Consensus 281 LKP~NILl~~~~~~~KL~DFGlA~~l~~~~-~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k 359 (566)
T PLN03225 281 VKPQNIIFSEGSGSFKIIDLGAAADLRVGI-NYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDR 359 (566)
T ss_pred CCHHHEEEeCCCCcEEEEeCCCcccccccc-ccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCC
Confidence 9999999986 5799999999998764332 2233445678899999954 11 23456
Q ss_pred cchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcCCCCCch----h--hHHHHHHHHHHHHHHhc
Q 004994 627 SDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDGA----Y--LAKSLSRFADIISRCVQ 700 (720)
Q Consensus 627 ~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~--~~~~~~~l~~l~~~cl~ 700 (720)
+|||||||++|||+++..|++.... .+.+.....-.+.......+.+..... + .........+|+.+||+
T Consensus 360 ~DVwSlGviL~el~~~~~~~~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~ 435 (566)
T PLN03225 360 FDIYSAGLIFLQMAFPNLRSDSNLI----QFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMR 435 (566)
T ss_pred cccHHHHHHHHHHHhCcCCCchHHH----HHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHcc
Confidence 7999999999999998776543110 000000000000001111111111000 0 00011235589999999
Q ss_pred cCCCCCCCHHHHHHH
Q 004994 701 WEPGFRPPMSEIVQD 715 (720)
Q Consensus 701 ~dP~~RPt~~evl~~ 715 (720)
.||++|||++|+++|
T Consensus 436 ~dP~kR~ta~e~L~H 450 (566)
T PLN03225 436 FKGRQRISAKAALAH 450 (566)
T ss_pred CCcccCCCHHHHhCC
Confidence 999999999999976
No 387
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.97 E-value=1.5e-30 Score=285.21 Aligned_cols=262 Identities=19% Similarity=0.263 Sum_probs=180.6
Q ss_pred hcCCCCCCeeccCCCceEEEEEe-----------------CCCcEEEEEEecccccc------------cccHHHHHHHH
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAEL-----------------PGGKLLAVKKLSNTVSQ------------RQTDEEFLELA 489 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~-----------------~~g~~vavK~l~~~~~~------------~~~~~~~~~e~ 489 (720)
.++|...++||+|+||+||+|.. .+++.||||++...... ....+.+..|+
T Consensus 144 ~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~ 223 (507)
T PLN03224 144 SDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEA 223 (507)
T ss_pred ccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHH
Confidence 56899999999999999999953 23568999998643110 11123344567
Q ss_pred HHHHccCCCce-----eEEEeEecc--------CCeEEEEEeeCCCCCHHHHhhccch--------------------hc
Q 004994 490 STISRLRHGNI-----VELIGYCNE--------HGQHLLVYDYGGNCTLHDLLHSDEE--------------------AH 536 (720)
Q Consensus 490 ~~l~~l~H~ni-----v~l~~~~~~--------~~~~~lv~e~~~~gsL~~~l~~~~~--------------------~~ 536 (720)
.++.+++|.++ +++++||.. .+..++||||+++++|.++++.... ..
T Consensus 224 ~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~ 303 (507)
T PLN03224 224 YMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQ 303 (507)
T ss_pred HHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhccc
Confidence 77777776654 677887753 3568999999999999999874211 11
Q ss_pred cccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCCCcccccCccccccCCCC
Q 004994 537 KKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAP 616 (720)
Q Consensus 537 ~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aP 616 (720)
..++|..+..++.+++++|.|||+. +|+||||||+|||++.++.+||+|||+++.+...... .......++.|+||
T Consensus 304 ~~~~~~~~~~i~~ql~~aL~~lH~~---~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~-~~~~g~~tp~Y~aP 379 (507)
T PLN03224 304 DKRDINVIKGVMRQVLTGLRKLHRI---GIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINF-NPLYGMLDPRYSPP 379 (507)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCchHhEEECCCCcEEEEeCcCccccccCCcc-CccccCCCcceeCh
Confidence 2356788899999999999999987 8999999999999999999999999999765432211 11112236789999
Q ss_pred ccCCC-C--------------------C--CCccchHhHHHHHHHHHhCCC-CCCCCCCcc------ccchhhhcccccC
Q 004994 617 EFESG-S--------------------Y--SCQSDVYSLGVVMLELLTGRK-PYDRSRPRG------EQSLVRWAIPRLH 666 (720)
Q Consensus 617 E~~~~-~--------------------~--~~~~Dv~S~Gvvl~elltG~~-Pf~~~~~~~------~~~~~~~~~~~~~ 666 (720)
|.+.. . | ..+.||||+||++|||++|.. ||....... ......|..
T Consensus 380 E~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~---- 455 (507)
T PLN03224 380 EELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRM---- 455 (507)
T ss_pred hhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHh----
Confidence 97621 1 1 124799999999999999875 664321110 011111110
Q ss_pred chhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCC---CCCCCHHHHHHH
Q 004994 667 DIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEP---GFRPPMSEIVQD 715 (720)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP---~~RPt~~evl~~ 715 (720)
+..............+...+++.++|..+| .+|+|++|+++|
T Consensus 456 -------~~~~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~H 500 (507)
T PLN03224 456 -------YKGQKYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSH 500 (507)
T ss_pred -------hcccCCCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCC
Confidence 000111111122334677899999999876 689999999976
No 388
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.97 E-value=4.5e-30 Score=259.90 Aligned_cols=238 Identities=31% Similarity=0.391 Sum_probs=187.8
Q ss_pred CCceEEEEEeC-CCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEeeCCCCCHHHHhh
Q 004994 452 LLGSVYKAELP-GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLH 530 (720)
Q Consensus 452 ~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~ 530 (720)
+||.||+|... +|+.+|+|++........ .+.+.+|++.+++++|+||+++++++......+++|||+++++|.+++.
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~ 79 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKK-RERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLK 79 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccH-HHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHH
Confidence 58999999775 589999999975432211 6789999999999999999999999999899999999999999999885
Q ss_pred ccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCCCcccccCcccc
Q 004994 531 SDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTA 610 (720)
Q Consensus 531 ~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~ 610 (720)
.. ..+++.....++.++++++.|||.. +++|+||+|+||++++++.++|+|||.+....... ......++
T Consensus 80 ~~----~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~---~~~~~~~~ 149 (244)
T smart00220 80 KR----GRLSEDEARFYARQILSALEYLHSN---GIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG---LLTTFVGT 149 (244)
T ss_pred hc----cCCCHHHHHHHHHHHHHHHHHHHHc---CeecCCcCHHHeEECCCCcEEEccccceeeecccc---ccccccCC
Confidence 42 2278899999999999999999987 99999999999999999999999999998764432 22234567
Q ss_pred ccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcCCCCCch-hhHHHH
Q 004994 611 HGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDGA-YLAKSL 688 (720)
Q Consensus 611 ~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 688 (720)
..|++||.. ...++.++||||||++++|+++|..||...... ....+.. ........ .....+
T Consensus 150 ~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~--~~~~~~~-------------~~~~~~~~~~~~~~~ 214 (244)
T smart00220 150 PEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQL--LELFKKI-------------GKPKPPFPPPEWKIS 214 (244)
T ss_pred cCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcH--HHHHHHH-------------hccCCCCccccccCC
Confidence 789999988 467889999999999999999999999652111 1111110 00000000 000034
Q ss_pred HHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 689 SRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 689 ~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.++.+++.+|+..+|++||++.+++++
T Consensus 215 ~~~~~~i~~~l~~~p~~Rp~~~~~~~~ 241 (244)
T smart00220 215 PEAKDLIRKLLVKDPEKRLTAEEALQH 241 (244)
T ss_pred HHHHHHHHHHccCCchhccCHHHHhhC
Confidence 578899999999999999999999873
No 389
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=1.2e-30 Score=273.21 Aligned_cols=209 Identities=22% Similarity=0.310 Sum_probs=172.5
Q ss_pred CCCCCCeeccCCCceEEEEE-eCCCcEEEEEEeccc-ccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEe
Q 004994 441 SFSEGNFIGEGLLGSVYKAE-LPGGKLLAVKKLSNT-VSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYD 518 (720)
Q Consensus 441 ~~~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~-~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 518 (720)
-|...+.||-|+||+|.++. .++...||+|.+++. +..+........|-+||.+.+.+.||+||-.|.+.+.+|+|||
T Consensus 630 mFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVMd 709 (1034)
T KOG0608|consen 630 MFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 709 (1034)
T ss_pred ceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEEe
Confidence 36677899999999999994 566789999999753 3344445566788899999999999999999999999999999
Q ss_pred eCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCC---
Q 004994 519 YGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLL--- 595 (720)
Q Consensus 519 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~--- 595 (720)
|++||++..+|.. ..-|.+.....++..+..|+++.|.. |+|||||||+|||||.+|++||+|||++.-+
T Consensus 710 YIPGGDmMSLLIr----mgIFeE~LARFYIAEltcAiesVHkm---GFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWT 782 (1034)
T KOG0608|consen 710 YIPGGDMMSLLIR----MGIFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWT 782 (1034)
T ss_pred ccCCccHHHHHHH----hccCHHHHHHHHHHHHHHHHHHHHhc---cceecccCccceEEccCCceeeeeccccccceec
Confidence 9999999999853 34567777777788899999999998 9999999999999999999999999997543
Q ss_pred ------CCCCCc-------------------------------ccccCccccccCCCCccC-CCCCCCccchHhHHHHHH
Q 004994 596 ------FSGSTN-------------------------------ELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVML 637 (720)
Q Consensus 596 ------~~~~~~-------------------------------~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ 637 (720)
..++.. .......||..|+|||++ ...|+..+|+||.|||||
T Consensus 783 HdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~ 862 (1034)
T KOG0608|consen 783 HDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILY 862 (1034)
T ss_pred cccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHH
Confidence 111000 011235689999999998 556999999999999999
Q ss_pred HHHhCCCCCCCCCCccccc
Q 004994 638 ELLTGRKPYDRSRPRGEQS 656 (720)
Q Consensus 638 elltG~~Pf~~~~~~~~~~ 656 (720)
||+.|+.||-...+.+.+.
T Consensus 863 em~~g~~pf~~~tp~~tq~ 881 (1034)
T KOG0608|consen 863 EMLVGQPPFLADTPGETQY 881 (1034)
T ss_pred HHhhCCCCccCCCCCccee
Confidence 9999999998777666543
No 390
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=6.4e-31 Score=269.36 Aligned_cols=243 Identities=20% Similarity=0.265 Sum_probs=196.0
Q ss_pred cCCCCCCeeccCCCceEEEEEeCCCc-EEEEEEeccc-ccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAELPGGK-LLAVKKLSNT-VSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVY 517 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~~~g~-~vavK~l~~~-~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 517 (720)
.++.....||-|+||.|-.+..+... .+|+|.+++. ..+....+....|-.+|...+.|.||++|--|.+....|++|
T Consensus 420 ~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLm 499 (732)
T KOG0614|consen 420 SDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLM 499 (732)
T ss_pred hhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhH
Confidence 34555678999999999998765543 4899998754 233344455678889999999999999999999999999999
Q ss_pred eeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCC
Q 004994 518 DYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFS 597 (720)
Q Consensus 518 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~ 597 (720)
|-|-||.+...+++ +..|+..+..-++..+.+|+.|||.. +||+|||||+|.++|.+|-+||.|||+|+.+..
T Consensus 500 EaClGGElWTiLrd----Rg~Fdd~tarF~~acv~EAfeYLH~k---~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~ 572 (732)
T KOG0614|consen 500 EACLGGELWTILRD----RGSFDDYTARFYVACVLEAFEYLHRK---GIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGS 572 (732)
T ss_pred HhhcCchhhhhhhh----cCCcccchhhhhHHHHHHHHHHHHhc---CceeccCChhheeeccCCceEEeehhhHHHhcc
Confidence 99999999999964 45677778888899999999999997 999999999999999999999999999999866
Q ss_pred CCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcC
Q 004994 598 GSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVD 676 (720)
Q Consensus 598 ~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (720)
+... -.+.||+.|.|||++ ...-+.++|.||+|+++|||+||.+||...++....+++-.....+
T Consensus 573 g~KT---wTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~i----------- 638 (732)
T KOG0614|consen 573 GRKT---WTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDKI----------- 638 (732)
T ss_pred CCce---eeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhhh-----------
Confidence 5433 347899999999998 5557889999999999999999999998877655444332111100
Q ss_pred CCCCchhhHHHHHHHHHHHHHHhccCCCCCCC
Q 004994 677 PSLDGAYLAKSLSRFADIISRCVQWEPGFRPP 708 (720)
Q Consensus 677 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt 708 (720)
.++........+++++.+..+|.+|..
T Consensus 639 -----~~Pr~I~k~a~~Lik~LCr~~P~ERLG 665 (732)
T KOG0614|consen 639 -----EFPRRITKTATDLIKKLCRDNPTERLG 665 (732)
T ss_pred -----hcccccchhHHHHHHHHHhcCcHhhhc
Confidence 122233345679999999999999975
No 391
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.96 E-value=4.7e-30 Score=278.40 Aligned_cols=247 Identities=26% Similarity=0.368 Sum_probs=183.2
Q ss_pred CCCCCeeccCCCce-EEEEEeCCCcEEEEEEecccccccccHHHHHHHHHHHHcc-CCCceeEEEeEeccCCeEEEEEee
Q 004994 442 FSEGNFIGEGLLGS-VYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRL-RHGNIVELIGYCNEHGQHLLVYDY 519 (720)
Q Consensus 442 ~~~~~~lg~G~~g~-Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv~e~ 519 (720)
|...+++|.|+.|+ ||+|.. .|+.||||++-.+ ...-..+|+..++.- +|||||++|+.-.+.+..|+..|.
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~y-e~R~VAVKrll~e-----~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalEL 584 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVY-EGREVAVKRLLEE-----FFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALEL 584 (903)
T ss_pred eccHHHcccCCCCcEEEEEee-CCceehHHHHhhH-----hHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehH
Confidence 44457799998876 699987 5689999998643 223457899999887 699999999998899999999999
Q ss_pred CCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcC---C--CCeEEccccCCCC
Q 004994 520 GGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDE---K--LIVRVSDCGLAPL 594 (720)
Q Consensus 520 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~---~--~~~kl~DFGla~~ 594 (720)
|. ++|.+++..............-..+..|++.||++||+. +||||||||.||||+. + ..++|+|||+++.
T Consensus 585 C~-~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl---~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKk 660 (903)
T KOG1027|consen 585 CA-CSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSL---KIVHRDLKPQNILISVPSADGTLRAKISDFGLSKK 660 (903)
T ss_pred hh-hhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhc---ccccccCCCceEEEEccCCCcceeEEecccccccc
Confidence 87 499999975311111111133456888999999999997 9999999999999976 3 4799999999998
Q ss_pred CCCCCCc-ccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhC-CCCCCCCCCccccchhhhcccccCchhhh
Q 004994 595 LFSGSTN-ELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTG-RKPYDRSRPRGEQSLVRWAIPRLHDIDAL 671 (720)
Q Consensus 595 ~~~~~~~-~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG-~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (720)
+..+... ....+..||-||+|||.+ ...-+..+||||+|||+|+.++| ..||...-..+. +++. ....+
T Consensus 661 l~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~-NIl~-------~~~~L 732 (903)
T KOG1027|consen 661 LAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQA-NILT-------GNYTL 732 (903)
T ss_pred cCCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhh-hhhc-------Cccce
Confidence 8655332 224567789999999998 44556789999999999999995 999975432211 1111 11111
Q ss_pred hhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 672 SRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 672 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
..+. + ..++ +..+||.+|++.||..||++.+|+.|
T Consensus 733 ~~L~-~------~~d~--eA~dLI~~ml~~dP~~RPsa~~VL~H 767 (903)
T KOG1027|consen 733 VHLE-P------LPDC--EAKDLISRMLNPDPQLRPSATDVLNH 767 (903)
T ss_pred eeec-c------CchH--HHHHHHHHhcCCCcccCCCHHHHhCC
Confidence 1100 0 0111 67799999999999999999999864
No 392
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.96 E-value=1.2e-29 Score=235.92 Aligned_cols=256 Identities=18% Similarity=0.309 Sum_probs=193.6
Q ss_pred hcCCCCCCeeccCCCceEEEE-EeCCCcEEEEEEecccccccccHHHHHHHHHHHHccC-CCceeEEEeEeccC--CeEE
Q 004994 439 TNSFSEGNFIGEGLLGSVYKA-ELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLR-HGNIVELIGYCNEH--GQHL 514 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~-~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~~~~~~~--~~~~ 514 (720)
.++|+..+.+|+|.|++||.| ...+.+.++||.+++- ..+...+|+++|+.|+ ||||+++++...+. ....
T Consensus 37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV-----kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~Sktpa 111 (338)
T KOG0668|consen 37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPV-----KKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPS 111 (338)
T ss_pred cchHHHHHHHcCccHhhHhcccccCCCceEEEeeechH-----HHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCch
Confidence 457778899999999999999 4567889999999743 3457889999999996 99999999998765 4677
Q ss_pred EEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCC-CCeEEccccCCC
Q 004994 515 LVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEK-LIVRVSDCGLAP 593 (720)
Q Consensus 515 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~-~~~kl~DFGla~ 593 (720)
+|+||+.+-+...+. ..++...+..++.++..||.|+|+. ||.|||+||.|+++|.. ..++|+|+|+|.
T Consensus 112 LiFE~v~n~Dfk~ly-------~tl~d~dIryY~~elLkALdyCHS~---GImHRDVKPhNvmIdh~~rkLrlIDWGLAE 181 (338)
T KOG0668|consen 112 LIFEYVNNTDFKQLY-------PTLTDYDIRYYIYELLKALDYCHSM---GIMHRDVKPHNVMIDHELRKLRLIDWGLAE 181 (338)
T ss_pred hHhhhhccccHHHHh-------hhhchhhHHHHHHHHHHHHhHHHhc---CcccccCCcceeeechhhceeeeeecchHh
Confidence 999999998877655 3466677788999999999999998 99999999999999864 578999999999
Q ss_pred CCCCCCCcccccCccccccCCCCccC--CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhh
Q 004994 594 LLFSGSTNELSEGLLTAHGSGAPEFE--SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDAL 671 (720)
Q Consensus 594 ~~~~~~~~~~~~~~~~~~~~~aPE~~--~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (720)
+..++... .....+.+|.-||.+ -..|+..-|+|||||++..|+..+.||-.... ....+++.+. .+ ..+.+
T Consensus 182 FYHp~~eY---nVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~d-N~DQLVkIak-VL-Gt~el 255 (338)
T KOG0668|consen 182 FYHPGKEY---NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHD-NYDQLVKIAK-VL-GTDEL 255 (338)
T ss_pred hcCCCcee---eeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCC-CHHHHHHHHH-Hh-ChHHH
Confidence 88665433 234567788999998 45799999999999999999999999965332 1222222211 00 00111
Q ss_pred hh-------hcCCCCCc----------------hhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 672 SR-------MVDPSLDG----------------AYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 672 ~~-------~~~~~~~~----------------~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.. .+||...+ ....-..++..+++.+.|..|..+|+|++|++.|
T Consensus 256 ~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~H 322 (338)
T KOG0668|consen 256 YAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAH 322 (338)
T ss_pred HHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcC
Confidence 10 01111110 0011123678899999999999999999998764
No 393
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=4.1e-29 Score=243.85 Aligned_cols=248 Identities=17% Similarity=0.259 Sum_probs=185.7
Q ss_pred cCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccH-HHHHHHHHHHHcc-CCCceeEEEeEeccCCeEEEE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTD-EEFLELASTISRL-RHGNIVELIGYCNEHGQHLLV 516 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~-~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv 516 (720)
++|...++||+|+|.+|..+++ ++.+.||+|+++++....... .-...|-.+.... +||.+|-+..+|..+..+++|
T Consensus 250 ~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlffv 329 (593)
T KOG0695|consen 250 QDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFFV 329 (593)
T ss_pred ccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEEE
Confidence 5788899999999999999976 568899999998765433322 2334444444444 799999999999999999999
Q ss_pred EeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCC
Q 004994 517 YDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLF 596 (720)
Q Consensus 517 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~ 596 (720)
.||+++|+|.-.++ ..+.++.....-+...|.-||.|||+. |||+||||.+|||+|.+|++|++|||+.+.--
T Consensus 330 ieyv~ggdlmfhmq----rqrklpeeharfys~ei~lal~flh~r---giiyrdlkldnvlldaeghikltdygmcke~l 402 (593)
T KOG0695|consen 330 IEYVNGGDLMFHMQ----RQRKLPEEHARFYSAEICLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGL 402 (593)
T ss_pred EEEecCcceeeehh----hhhcCcHHHhhhhhHHHHHHHHHHhhc---CeeeeeccccceEEccCCceeecccchhhcCC
Confidence 99999999875553 235677777777888999999999998 99999999999999999999999999987532
Q ss_pred CCCCcccccCccccccCCCCccCC-CCCCCccchHhHHHHHHHHHhCCCCCCCCCCccc-cchhhhcccccCchhhhhhh
Q 004994 597 SGSTNELSEGLLTAHGSGAPEFES-GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGE-QSLVRWAIPRLHDIDALSRM 674 (720)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~aPE~~~-~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 674 (720)
.....+..+.||+.|.|||++. ..|...+|+|++||+|+||+.|+.||+...-... .+-..+ -+.-+
T Consensus 403 --~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedy---------lfqvi 471 (593)
T KOG0695|consen 403 --GPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDY---------LFQVI 471 (593)
T ss_pred --CCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHH---------HHHHH
Confidence 2234556688999999999995 4799999999999999999999999974221110 100000 00011
Q ss_pred cCCCCCchhhHHHHHHHHHHHHHHhccCCCCCC
Q 004994 675 VDPSLDGAYLAKSLSRFADIISRCVQWEPGFRP 707 (720)
Q Consensus 675 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP 707 (720)
+...+. .+...+.....+++.-|.+||.+|.
T Consensus 472 lekqir--iprslsvkas~vlkgflnkdp~erl 502 (593)
T KOG0695|consen 472 LEKQIR--IPRSLSVKASHVLKGFLNKDPKERL 502 (593)
T ss_pred hhhccc--ccceeehhhHHHHHHhhcCCcHHhc
Confidence 111110 1122223455788999999999984
No 394
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=7e-31 Score=249.75 Aligned_cols=265 Identities=20% Similarity=0.343 Sum_probs=192.0
Q ss_pred CCCCeeccCCCceEEEEE-eCCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccC-----CeEEEE
Q 004994 443 SEGNFIGEGLLGSVYKAE-LPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEH-----GQHLLV 516 (720)
Q Consensus 443 ~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~-----~~~~lv 516 (720)
+..+-||-|+||+||-+. -.+|+.||+|++..-...-...+.+.+|++++..++|.|++..++...-. ++.|.+
T Consensus 56 ~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~ 135 (449)
T KOG0664|consen 56 QPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVL 135 (449)
T ss_pred CCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHH
Confidence 345789999999999994 46899999999976544455668899999999999999999988876433 256788
Q ss_pred EeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCC
Q 004994 517 YDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLF 596 (720)
Q Consensus 517 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~ 596 (720)
+|.|.. +|+.++. ....++-....-...||.+||.|||+. +|.||||||-|.|++.+..+||||||+|+.-.
T Consensus 136 TELmQS-DLHKIIV----SPQ~Ls~DHvKVFlYQILRGLKYLHsA---~ILHRDIKPGNLLVNSNCvLKICDFGLARvee 207 (449)
T KOG0664|consen 136 TELMQS-DLHKIIV----SPQALTPDHVKVFVYQILRGLKYLHTA---NILHRDIKPGNLLVNSNCILKICDFGLARTWD 207 (449)
T ss_pred HHHHHh-hhhheec----cCCCCCcchhhhhHHHHHhhhHHHhhc---chhhccCCCccEEeccCceEEecccccccccc
Confidence 888764 6776664 345566666777889999999999998 99999999999999999999999999998765
Q ss_pred CCCCcccccCccccccCCCCccCCC--CCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcc--cccCc-----
Q 004994 597 SGSTNELSEGLLTAHGSGAPEFESG--SYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAI--PRLHD----- 667 (720)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~aPE~~~~--~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~--~~~~~----- 667 (720)
..+...++. ..-|.+|+|||++.| .|+.++||||.|||+.|++.++.-|....+.....++.-.. +..++
T Consensus 208 ~d~~~hMTq-EVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~AC 286 (449)
T KOG0664|consen 208 QRDRLNMTH-EVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYAC 286 (449)
T ss_pred hhhhhhhHH-HHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHh
Confidence 443333322 334778999999844 69999999999999999999999887655544333221110 10000
Q ss_pred hhhhhhhcC-----CCCCchh----hHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q 004994 668 IDALSRMVD-----PSLDGAY----LAKSLSRFADIISRCVQWEPGFRPPMSEIVQDL 716 (720)
Q Consensus 668 ~~~~~~~~~-----~~~~~~~----~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L 716 (720)
.+.-..++. |.+.-.| ++.--.+..++.+.++..||++|.+.++.+.++
T Consensus 287 EGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~ 344 (449)
T KOG0664|consen 287 EGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHR 344 (449)
T ss_pred hhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccc
Confidence 000011111 1111101 111123456889999999999999999988764
No 395
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.95 E-value=1.3e-28 Score=240.45 Aligned_cols=261 Identities=19% Similarity=0.249 Sum_probs=190.9
Q ss_pred CCCCCCeeccCCCceEEEE-EeCCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccC------CeE
Q 004994 441 SFSEGNFIGEGLLGSVYKA-ELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEH------GQH 513 (720)
Q Consensus 441 ~~~~~~~lg~G~~g~Vy~~-~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~------~~~ 513 (720)
+|...+.+|.|.- .|.-+ +.-.++.||+|++..........+...+|...+..+.|+||++++.+|.-. .+.
T Consensus 18 Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~ 96 (369)
T KOG0665|consen 18 RYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEV 96 (369)
T ss_pred eeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhH
Confidence 4555677888887 45444 344588999999876665566677888999999999999999999998532 368
Q ss_pred EEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCC
Q 004994 514 LLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAP 593 (720)
Q Consensus 514 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~ 593 (720)
|+|||||.. +|.+.++ ..++......|..|+..|+.|||+. +|+||||||+||++..+..+||.|||+|+
T Consensus 97 y~v~e~m~~-nl~~vi~------~elDH~tis~i~yq~~~~ik~lhs~---~IihRdLkPsnivv~~~~~lKi~dfg~ar 166 (369)
T KOG0665|consen 97 YLVMELMDA-NLCQVIL------MELDHETISYILYQMLCGIKHLHSA---GIIHRDLKPSNIVVNSDCTLKILDFGLAR 166 (369)
T ss_pred HHHHHhhhh-HHHHHHH------HhcchHHHHHHHHHHHHHHHHHHhc---ceeecccCcccceecchhheeeccchhhc
Confidence 999999985 8888775 2356677888999999999999998 99999999999999999999999999997
Q ss_pred CCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcc--c------c
Q 004994 594 LLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAI--P------R 664 (720)
Q Consensus 594 ~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~--~------~ 664 (720)
.-.. .........+..|.|||.+ +-.|.+.+||||.||++.||++|+.-|.+.+..+....+.... + +
T Consensus 167 ~e~~---~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~q 243 (369)
T KOG0665|consen 167 TEDT---DFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQ 243 (369)
T ss_pred ccCc---ccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHH
Confidence 5422 2234456778999999998 4459999999999999999999999987544322111110000 0 0
Q ss_pred cCch-------------hhhhhhc-CCCCCch--hhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 665 LHDI-------------DALSRMV-DPSLDGA--YLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 665 ~~~~-------------~~~~~~~-~~~~~~~--~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
+... -...+.+ |..+... ........+++++.+||..+|++|.+++++|+|
T Consensus 244 L~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~H 310 (369)
T KOG0665|consen 244 LQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRH 310 (369)
T ss_pred hhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcC
Confidence 0000 0000111 1111100 011123467899999999999999999999975
No 396
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.95 E-value=8.6e-27 Score=230.05 Aligned_cols=211 Identities=36% Similarity=0.542 Sum_probs=179.0
Q ss_pred eccCCCceEEEEEeC-CCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEeeCCCCCHH
Q 004994 448 IGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDYGGNCTLH 526 (720)
Q Consensus 448 lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL~ 526 (720)
||+|.+|.||++... +++.+++|++....... ..+.+.+|++.++.++|++|+++++++......++++||+++++|.
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~-~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~ 79 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS-LLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLK 79 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchh-HHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHH
Confidence 689999999999765 48999999997543211 3467899999999999999999999999989999999999999999
Q ss_pred HHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcC-CCCeEEccccCCCCCCCCCCccccc
Q 004994 527 DLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDE-KLIVRVSDCGLAPLLFSGSTNELSE 605 (720)
Q Consensus 527 ~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~-~~~~kl~DFGla~~~~~~~~~~~~~ 605 (720)
+++.... ..+++..+..++.+++++++|||+. +++|+||+|.||+++. ++.++|+|||.+........ ...
T Consensus 80 ~~~~~~~---~~~~~~~~~~~~~~l~~~l~~lh~~---~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~--~~~ 151 (215)
T cd00180 80 DLLKENE---GKLSEDEILRILLQILEGLEYLHSN---GIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS--LLK 151 (215)
T ss_pred HHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc--hhh
Confidence 9985321 4578899999999999999999987 9999999999999999 89999999999976643221 122
Q ss_pred CccccccCCCCccCCC--CCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcCCCCCchh
Q 004994 606 GLLTAHGSGAPEFESG--SYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDGAY 683 (720)
Q Consensus 606 ~~~~~~~~~aPE~~~~--~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 683 (720)
...+...|.+||.... .++.+.|+|++|++++++
T Consensus 152 ~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l-------------------------------------------- 187 (215)
T cd00180 152 TIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL-------------------------------------------- 187 (215)
T ss_pred cccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH--------------------------------------------
Confidence 2446678999998843 788999999999999999
Q ss_pred hHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q 004994 684 LAKSLSRFADIISRCVQWEPGFRPPMSEIVQDL 716 (720)
Q Consensus 684 ~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L 716 (720)
..+.+++.+|++.+|++||++.++++++
T Consensus 188 -----~~~~~~l~~~l~~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 188 -----PELKDLIRKMLQKDPEKRPSAKEILEHL 215 (215)
T ss_pred -----HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence 2467999999999999999999998753
No 397
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.95 E-value=9.1e-29 Score=261.60 Aligned_cols=253 Identities=23% Similarity=0.323 Sum_probs=200.1
Q ss_pred hcCCCCCCeeccCCCceEEEEE-eCCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEE
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAE-LPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVY 517 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 517 (720)
.++|....++|.|+||.|||++ ...++..|+|+++.+.. ....-...|+-+++..+|||||.++|.+...+..++.|
T Consensus 14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~--dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicM 91 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPG--DDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICM 91 (829)
T ss_pred ccchhheeeecCCcccchhhhcccccCchhhheeeeccCC--ccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEE
Confidence 4578888999999999999994 56799999999975432 33345667888999999999999999999999999999
Q ss_pred eeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCC
Q 004994 518 DYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFS 597 (720)
Q Consensus 518 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~ 597 (720)
|||.+|+|++..+. ...+++.++..+.....+||.|||+. +=+|||||-.|||+++.|.+|++|||.+-.+..
T Consensus 92 EycgggslQdiy~~----TgplselqiayvcRetl~gl~ylhs~---gk~hRdiKGanilltd~gDvklaDfgvsaqita 164 (829)
T KOG0576|consen 92 EYCGGGSLQDIYHV----TGPLSELQIAYVCRETLQGLKYLHSQ---GKIHRDIKGANILLTDEGDVKLADFGVSAQITA 164 (829)
T ss_pred EecCCCcccceeee----cccchhHHHHHHHhhhhccchhhhcC---CcccccccccceeecccCceeecccCchhhhhh
Confidence 99999999998753 45677888888889999999999987 779999999999999999999999999876632
Q ss_pred CCCcccccCccccccCCCCccC----CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhh
Q 004994 598 GSTNELSEGLLTAHGSGAPEFE----SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSR 673 (720)
Q Consensus 598 ~~~~~~~~~~~~~~~~~aPE~~----~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (720)
+-.......||++|||||+. .+.|..++|||+.|+...|+-.-+.|..+..+.....+.....
T Consensus 165 --ti~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS~----------- 231 (829)
T KOG0576|consen 165 --TIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTKSG----------- 231 (829)
T ss_pred --hhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhccC-----------
Confidence 22234457899999999986 4679999999999999999999888865433322111111100
Q ss_pred hcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 674 MVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 674 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.-.|.+.+ .....+.|.+|++.|+.++|.+|||++.++++
T Consensus 232 ~qpp~lkD--k~kws~~fh~fvK~altknpKkRptaeklL~h 271 (829)
T KOG0576|consen 232 FQPPTLKD--KTKWSEFFHNFVKGALTKNPKKRPTAEKLLQH 271 (829)
T ss_pred CCCCcccC--CccchHHHHHHHHHHhcCCCccCCChhhheec
Confidence 01122221 12344678899999999999999999987753
No 398
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.94 E-value=8.9e-28 Score=247.00 Aligned_cols=268 Identities=19% Similarity=0.272 Sum_probs=196.6
Q ss_pred HHHHhcCCCCCCeeccCCCceEEEEE-eCCCcEEEEEEecccccccccHHHHHHHHHHHHccCC------CceeEEEeEe
Q 004994 435 LQQYTNSFSEGNFIGEGLLGSVYKAE-LPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRH------GNIVELIGYC 507 (720)
Q Consensus 435 ~~~~~~~~~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H------~niv~l~~~~ 507 (720)
.+.....|.+....|+|-|++|.+|. ...|+.||||+|..... ..+.=+.|+++|++|.. -|+++++-.|
T Consensus 427 gE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~---M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F 503 (752)
T KOG0670|consen 427 GELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEV---MHKTGLKELEILKKLNDADPEDKFHCLRLFRHF 503 (752)
T ss_pred hhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchH---HhhhhhHHHHHHHHhhccCchhhhHHHHHHHHh
Confidence 34456778888889999999999994 45688999999986532 22344688999999953 3899999999
Q ss_pred ccCCeEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCC-CeEE
Q 004994 508 NEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKL-IVRV 586 (720)
Q Consensus 508 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~-~~kl 586 (720)
...++++||||-+.- +|.++|.... ....+.......++.|+.-||..|... +|+|.||||+|||+++.. .+||
T Consensus 504 ~hknHLClVFE~Lsl-NLRevLKKyG-~nvGL~ikaVRsYaqQLflALklLK~c---~vlHaDIKPDNiLVNE~k~iLKL 578 (752)
T KOG0670|consen 504 KHKNHLCLVFEPLSL-NLREVLKKYG-RNVGLHIKAVRSYAQQLFLALKLLKKC---GVLHADIKPDNILVNESKNILKL 578 (752)
T ss_pred hhcceeEEEehhhhc-hHHHHHHHhC-cccceeehHHHHHHHHHHHHHHHHHhc---CeeecccCccceEeccCcceeee
Confidence 999999999998764 8999997543 344567778889999999999999987 999999999999998765 5799
Q ss_pred ccccCCCCCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhccccc
Q 004994 587 SDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRL 665 (720)
Q Consensus 587 ~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~ 665 (720)
||||.|-.... +.+++ ..-+.+|.|||++ +-.|+...|+||.||.||||.||+.-|.+...-....+.--....+
T Consensus 579 CDfGSA~~~~e---neitP-YLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~ 654 (752)
T KOG0670|consen 579 CDFGSASFASE---NEITP-YLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKF 654 (752)
T ss_pred ccCcccccccc---ccccH-HHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCC
Confidence 99999976533 22222 3345689999998 5589999999999999999999999887654322111100000000
Q ss_pred C-----------------------------ch-------------hhhhhhcC-CCCCchhhHHHHHHHHHHHHHHhccC
Q 004994 666 H-----------------------------DI-------------DALSRMVD-PSLDGAYLAKSLSRFADIISRCVQWE 702 (720)
Q Consensus 666 ~-----------------------------~~-------------~~~~~~~~-~~~~~~~~~~~~~~l~~l~~~cl~~d 702 (720)
+ +. +...+++. +.+++ .......+|.+|+.+|+..|
T Consensus 655 p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~d-eq~~~~~~~rdLLdkml~Ld 733 (752)
T KOG0670|consen 655 PNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPD-EQPKIVQQLRDLLDKMLILD 733 (752)
T ss_pred cHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCc-hhHHHHHHHHHHHHHHhccC
Confidence 0 00 00000000 11111 12345678999999999999
Q ss_pred CCCCCCHHHHHHH
Q 004994 703 PGFRPPMSEIVQD 715 (720)
Q Consensus 703 P~~RPt~~evl~~ 715 (720)
|++|.|..++|+|
T Consensus 734 P~KRit~nqAL~H 746 (752)
T KOG0670|consen 734 PEKRITVNQALKH 746 (752)
T ss_pred hhhcCCHHHHhcC
Confidence 9999999999876
No 399
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.94 E-value=1.1e-26 Score=238.06 Aligned_cols=131 Identities=19% Similarity=0.358 Sum_probs=111.3
Q ss_pred cCCCCCCeeccCCCceEEEE-EeCCCcEEEEEEecccccccccHHHHHHHHHHHHccC-----C---CceeEEEeEecc-
Q 004994 440 NSFSEGNFIGEGLLGSVYKA-ELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLR-----H---GNIVELIGYCNE- 509 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~-~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~-----H---~niv~l~~~~~~- 509 (720)
.+|.+.++||.|.|++||++ +..+.+.||+|+.+.. ....+..+.||++|++++ | .+||+|+++|..
T Consensus 78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA---qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~Fkhs 154 (590)
T KOG1290|consen 78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA---QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHS 154 (590)
T ss_pred ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehh---hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceec
Confidence 67888899999999999999 5567899999999643 456677889999999884 3 379999999964
Q ss_pred ---CCeEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEE
Q 004994 510 ---HGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILL 578 (720)
Q Consensus 510 ---~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl 578 (720)
+.+++||+|++.. +|..++... ..+.++...+.+|+.||+.||.|||..| +|||-||||+|||+
T Consensus 155 GpNG~HVCMVfEvLGd-nLLklI~~s--~YrGlpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl 221 (590)
T KOG1290|consen 155 GPNGQHVCMVFEVLGD-NLLKLIKYS--NYRGLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLL 221 (590)
T ss_pred CCCCcEEEEEehhhhh-HHHHHHHHh--CCCCCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeee
Confidence 4589999999876 777777643 3466888899999999999999999988 99999999999998
No 400
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.94 E-value=1.7e-27 Score=248.10 Aligned_cols=197 Identities=20% Similarity=0.309 Sum_probs=165.7
Q ss_pred cCCCCCCeeccCCCceEEEEEeC-CCcEEEEEEeccccccc------ccHHHHHHHHHHHHccC---CCceeEEEeEecc
Q 004994 440 NSFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQR------QTDEEFLELASTISRLR---HGNIVELIGYCNE 509 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~------~~~~~~~~e~~~l~~l~---H~niv~l~~~~~~ 509 (720)
.+|+..+.+|+|+||.|+.|.++ +...|+||.+.++..-. ...-..-.|+.+|..++ |+||++++++|++
T Consensus 561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEd 640 (772)
T KOG1152|consen 561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFED 640 (772)
T ss_pred ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeec
Confidence 46888899999999999999654 57789999987653211 11122456899999997 9999999999999
Q ss_pred CCeEEEEEee-CCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEcc
Q 004994 510 HGQHLLVYDY-GGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSD 588 (720)
Q Consensus 510 ~~~~~lv~e~-~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~D 588 (720)
++.+||+||- -++.+|++++. .+..+++....-|+.||+.|+++||+. +|||||||-+||.+|.+|-+||+|
T Consensus 641 dd~yyl~te~hg~gIDLFd~IE----~kp~m~E~eAk~IFkQV~agi~hlh~~---~ivhrdikdenvivd~~g~~klid 713 (772)
T KOG1152|consen 641 DDYYYLETEVHGEGIDLFDFIE----FKPRMDEPEAKLIFKQVVAGIKHLHDQ---GIVHRDIKDENVIVDSNGFVKLID 713 (772)
T ss_pred CCeeEEEecCCCCCcchhhhhh----ccCccchHHHHHHHHHHHhcccccccc---CceecccccccEEEecCCeEEEee
Confidence 9999999997 46778999984 456788999999999999999999987 999999999999999999999999
Q ss_pred ccCCCCCCCCCCcccccCccccccCCCCccCCCC-C-CCccchHhHHHHHHHHHhCCCCCC
Q 004994 589 CGLAPLLFSGSTNELSEGLLTAHGSGAPEFESGS-Y-SCQSDVYSLGVVMLELLTGRKPYD 647 (720)
Q Consensus 589 FGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-~-~~~~Dv~S~Gvvl~elltG~~Pf~ 647 (720)
||.|.....+. ...+.||.+|.|||.+.|. | +...|||++|++||.++..+.||-
T Consensus 714 fgsaa~~ksgp----fd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 714 FGSAAYTKSGP----FDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred ccchhhhcCCC----cceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 99987664332 3457899999999999664 5 556999999999999999998883
No 401
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.94 E-value=2.3e-26 Score=279.60 Aligned_cols=216 Identities=33% Similarity=0.527 Sum_probs=139.1
Q ss_pred cCCCCCHHHHHHHHHHHHhcCCC--CCCCccCCCCCCCCCCCceeEee-cCceeEEEecCCcccccCCcCcCCCCCccEE
Q 004994 24 CAGVTDPRDVMALNSLYISLNFP--PLEKWLSFGGDPCGDSWQGVFCV-FSNVTEIRLTGMNLGGVLADTLGDLESVINI 100 (720)
Q Consensus 24 ~~~~~~~~~~~al~~~~~~l~~~--~~~~w~~~~~~~c~~~w~gv~c~-~~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L 100 (720)
..+..+++|+.||++||+++.+| .+.+|.. +.|+| .|.||.|. .++++.|+|++|+++|.++..|..+++|+.|
T Consensus 22 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~w~~-~~~~c--~w~gv~c~~~~~v~~L~L~~~~i~~~~~~~~~~l~~L~~L 98 (968)
T PLN00113 22 NFSMLHAEELELLLSFKSSINDPLKYLSNWNS-SADVC--LWQGITCNNSSRVVSIDLSGKNISGKISSAIFRLPYIQTI 98 (968)
T ss_pred HccCCCHHHHHHHHHHHHhCCCCcccCCCCCC-CCCCC--cCcceecCCCCcEEEEEecCCCccccCChHHhCCCCCCEE
Confidence 33445889999999999999876 4788964 56777 89999997 4689999999999998888888888888888
Q ss_pred eccCCcccccCCCCcc---ccCcEEEecCCcCCCCC----------------------cchhhcccccccccccccccCC
Q 004994 101 DLSNNHIGGSIPSNLP---VTVRNFSLSGNQLTGSI----------------------PESLSRLTQLLDLSLNNNHLNG 155 (720)
Q Consensus 101 ~L~~N~l~g~ip~~~~---~~L~~L~Ls~N~l~g~~----------------------p~~l~~l~~L~~L~l~~N~l~g 155 (720)
+|++|+++|.+|..+. .+|++|+|++|+++|.+ |..++++++|++|+|++|.+.+
T Consensus 99 ~Ls~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~ 178 (968)
T PLN00113 99 NLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPRGSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVG 178 (968)
T ss_pred ECCCCccCCcCChHHhccCCCCCEEECcCCccccccCccccCCCCEEECcCCcccccCChHHhcCCCCCEEECccCcccc
Confidence 8888888888886543 45666666666555544 4445555555555555555555
Q ss_pred CCCchhcCCCCCceEeccCCcccccCCCCCCCCCCCceeeccccccccccc-cccccc-cceEEccCCcCcccCCcccCC
Q 004994 156 GIPDAFHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNNKLSGTLN-VLEDLH-LIDLNIENNLFSGPIPEKLLS 233 (720)
Q Consensus 156 ~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~~-l~~l~l~~N~l~g~~p~~~~~ 233 (720)
.+|..|+++++|++|+|++|++++.+|..++++++|+.|+|++|++++.++ .+..+. |+.|++++|+++|.+|..+.+
T Consensus 179 ~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~ 258 (968)
T PLN00113 179 KIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGN 258 (968)
T ss_pred cCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCCcCChhHhcCCCCCEEECcCceeccccChhHhC
Confidence 555555555555555555555555555555555555555555555554332 233332 555555555555555555555
Q ss_pred CccccccCc
Q 004994 234 IPNFRKDGN 242 (720)
Q Consensus 234 l~~l~~~~n 242 (720)
+++|+..+.
T Consensus 259 l~~L~~L~L 267 (968)
T PLN00113 259 LKNLQYLFL 267 (968)
T ss_pred CCCCCEEEC
Confidence 554444333
No 402
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.94 E-value=1.3e-26 Score=234.92 Aligned_cols=266 Identities=24% Similarity=0.330 Sum_probs=192.6
Q ss_pred HHHHhcCCCCCCeeccCCCceEEEEEe-C---CCcEEEEEEecccccccccHHHHHHHHHHHHcc-CCCceeEEEeEecc
Q 004994 435 LQQYTNSFSEGNFIGEGLLGSVYKAEL-P---GGKLLAVKKLSNTVSQRQTDEEFLELASTISRL-RHGNIVELIGYCNE 509 (720)
Q Consensus 435 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~---~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~ 509 (720)
+....+.|...++||+|.|++||++.. . ..+.||+|.+... ........|+++|..+ .+.||+++.+++..
T Consensus 31 ~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~t----s~p~ri~~El~~L~~~gG~~ni~~~~~~~rn 106 (418)
T KOG1167|consen 31 IPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRT----SSPSRILNELEMLYRLGGSDNIIKLNGCFRN 106 (418)
T ss_pred hhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccc----cCchHHHHHHHHHHHhccchhhhcchhhhcc
Confidence 334557788899999999999999943 2 4679999998643 3345688999999998 58999999999999
Q ss_pred CCeEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCC-CCeEEcc
Q 004994 510 HGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEK-LIVRVSD 588 (720)
Q Consensus 510 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~-~~~kl~D 588 (720)
+++..+|+||++.....+++. .++......+...+.+||+++|.. |||||||||+|+|.+.. +.-.|.|
T Consensus 107 nd~v~ivlp~~~H~~f~~l~~-------~l~~~~i~~Yl~~ll~Al~~~h~~---GIvHRDiKpsNFL~n~~t~rg~LvD 176 (418)
T KOG1167|consen 107 NDQVAIVLPYFEHDRFRDLYR-------SLSLAEIRWYLRNLLKALAHLHKN---GIVHRDIKPSNFLYNRRTQRGVLVD 176 (418)
T ss_pred CCeeEEEecccCccCHHHHHh-------cCCHHHHHHHHHHHHHHhhhhhcc---CccccCCCccccccccccCCceEEe
Confidence 999999999999999888874 355677888999999999999987 99999999999999854 5678999
Q ss_pred ccCCCCCC-----------------C--C-----------------------CCcccccCccccccCCCCccC--CCCCC
Q 004994 589 CGLAPLLF-----------------S--G-----------------------STNELSEGLLTAHGSGAPEFE--SGSYS 624 (720)
Q Consensus 589 FGla~~~~-----------------~--~-----------------------~~~~~~~~~~~~~~~~aPE~~--~~~~~ 624 (720)
||+|.... . + ..........||+||.|||.+ .+..+
T Consensus 177 FgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~Qt 256 (418)
T KOG1167|consen 177 FGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQT 256 (418)
T ss_pred chhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcC
Confidence 99986210 0 0 000011234589999999998 45689
Q ss_pred CccchHhHHHHHHHHHhCCCCCCCCCCccccchh----------------------hhcccccCch-------hhhh-hh
Q 004994 625 CQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLV----------------------RWAIPRLHDI-------DALS-RM 674 (720)
Q Consensus 625 ~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~----------------------~~~~~~~~~~-------~~~~-~~ 674 (720)
.++||||.|||++-+++++.||-....+. ..+. -|....+... +.+. +.
T Consensus 257 taiDiws~GVI~Lslls~~~PFf~a~dd~-~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~ 335 (418)
T KOG1167|consen 257 TAIDIWSAGVILLSLLSRRYPFFKAKDDA-DALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIES 335 (418)
T ss_pred CccceeeccceeehhhccccccccCcccc-chHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhh
Confidence 99999999999999999999995432211 1111 0110000000 0000 00
Q ss_pred cCCC----CCchhh-HHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 675 VDPS----LDGAYL-AKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 675 ~~~~----~~~~~~-~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
+.+. ...... +..+..+.+++.+|++.||.+|.|++|+|+|
T Consensus 336 ~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkH 381 (418)
T KOG1167|consen 336 IYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKH 381 (418)
T ss_pred cccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcC
Confidence 0000 000011 1123467899999999999999999999875
No 403
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.93 E-value=2.1e-25 Score=223.30 Aligned_cols=199 Identities=33% Similarity=0.482 Sum_probs=167.2
Q ss_pred CCCCCeeccCCCceEEEEEeCC-CcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEeeC
Q 004994 442 FSEGNFIGEGLLGSVYKAELPG-GKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDYG 520 (720)
Q Consensus 442 ~~~~~~lg~G~~g~Vy~~~~~~-g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 520 (720)
|...+.||+|++|.||++...+ ++.+|+|.+...... ...+.+.+|++.+++++|+|++++++++......++++||+
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 79 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE-KQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYC 79 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch-HHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEecc
Confidence 4556889999999999997654 889999999754322 24578899999999999999999999999989999999999
Q ss_pred CCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCCC
Q 004994 521 GNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGST 600 (720)
Q Consensus 521 ~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~~ 600 (720)
++++|.+++.... ..+++.....++.++++++.|||.. +++|+||+|+||+++.++.++|+|||.+........
T Consensus 80 ~~~~L~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~ 153 (225)
T smart00221 80 EGGDLFDYLRKKG---GKLSEEEARFYLRQILEALEYLHSL---GIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLA 153 (225)
T ss_pred CCCCHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeeCceeeEecCccc
Confidence 9999999986422 1178899999999999999999987 999999999999999999999999999987644321
Q ss_pred cccccCccccccCCCCccC-C-CCCCCccchHhHHHHHHHHHhCCCCCCC
Q 004994 601 NELSEGLLTAHGSGAPEFE-S-GSYSCQSDVYSLGVVMLELLTGRKPYDR 648 (720)
Q Consensus 601 ~~~~~~~~~~~~~~aPE~~-~-~~~~~~~Dv~S~Gvvl~elltG~~Pf~~ 648 (720)
. ......++..|++||.. . ..++.++|||+||++++||++|+.||..
T Consensus 154 ~-~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 154 A-LLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred c-cccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 1 12234566789999986 3 3577899999999999999999999965
No 404
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.93 E-value=5.3e-26 Score=216.80 Aligned_cols=249 Identities=16% Similarity=0.254 Sum_probs=179.3
Q ss_pred HhcCCCCCCeeccCCCceEEEEEeC-CCcEEEEEEecccccccccHHHHHHHHHHHHcc-CCCceeEEEeE-eccCCeEE
Q 004994 438 YTNSFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQRQTDEEFLELASTISRL-RHGNIVELIGY-CNEHGQHL 514 (720)
Q Consensus 438 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~-~~~~~~~~ 514 (720)
+.+.|.+.+.+|+|-||.+-.++++ ..+.+++|-+.... ...++|.+|...--.| .|.||+.-|++ |+..+.++
T Consensus 22 l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~---tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~Yv 98 (378)
T KOG1345|consen 22 LEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ---TTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYV 98 (378)
T ss_pred hhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcch---hhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEE
Confidence 4456888899999999999999765 57889999987543 4457899998876666 58999998874 56678889
Q ss_pred EEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEE-c-CCCCeEEccccCC
Q 004994 515 LVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILL-D-EKLIVRVSDCGLA 592 (720)
Q Consensus 515 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl-~-~~~~~kl~DFGla 592 (720)
+++||++-|+|.+-+.. ..+.+....+++.|++.|+.|+|+. ++||||||.+|||+ + +...+||||||+.
T Consensus 99 F~qE~aP~gdL~snv~~-----~GigE~~~K~v~~ql~SAi~fMHsk---nlVHRdlK~eNiLif~~df~rvKlcDFG~t 170 (378)
T KOG1345|consen 99 FVQEFAPRGDLRSNVEA-----AGIGEANTKKVFAQLLSAIEFMHSK---NLVHRDLKAENILIFDADFYRVKLCDFGLT 170 (378)
T ss_pred EeeccCccchhhhhcCc-----ccccHHHHHHHHHHHHHHHHHhhcc---chhhcccccceEEEecCCccEEEeeecccc
Confidence 99999999999987743 3455667788999999999999997 99999999999999 3 3448999999998
Q ss_pred CCCCCCCCcccccCccccccCCCCccCC----C--CCCCccchHhHHHHHHHHHhCCCCCCCCCCccc--cchhhhcccc
Q 004994 593 PLLFSGSTNELSEGLLTAHGSGAPEFES----G--SYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGE--QSLVRWAIPR 664 (720)
Q Consensus 593 ~~~~~~~~~~~~~~~~~~~~~~aPE~~~----~--~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~--~~~~~~~~~~ 664 (720)
+..+.. -....-+..|.+||... + ...+.+|||.||+|+|..+||+.||......+. .....|....
T Consensus 171 ~k~g~t-----V~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk 245 (378)
T KOG1345|consen 171 RKVGTT-----VKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRK 245 (378)
T ss_pred cccCce-----ehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhccc
Confidence 765321 11123355688888752 2 257789999999999999999999973221111 1122222111
Q ss_pred cCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 004994 665 LHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQ 714 (720)
Q Consensus 665 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 714 (720)
. +.++..+ ....+.+.++.++-+..+|++|-...++-+
T Consensus 246 ~-----------~~~P~~F-~~fs~~a~r~Fkk~lt~~~~drcki~~~kk 283 (378)
T KOG1345|consen 246 N-----------PALPKKF-NPFSEKALRLFKKSLTPRFKDRCKIWTAKK 283 (378)
T ss_pred C-----------ccCchhh-cccCHHHHHHHHHhcCCcccccchhHHHHH
Confidence 1 1111111 112345668888889999988844444433
No 405
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.92 E-value=1.3e-25 Score=265.81 Aligned_cols=196 Identities=19% Similarity=0.234 Sum_probs=136.9
Q ss_pred ccCC-CceeEEEeEec-------cCCeEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCC
Q 004994 494 RLRH-GNIVELIGYCN-------EHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPP 565 (720)
Q Consensus 494 ~l~H-~niv~l~~~~~-------~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ 565 (720)
.++| +||++++++|. +.+..++++||++ ++|.+++... ...+++..+..++.|+++||.|||+. +
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-~~L~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH~~---g 100 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECED-VSLRQWLDNP---DRSVDAFECFHVFRQIVEIVNAAHSQ---G 100 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccCC-ccHHHHHhcc---cccccHHHHHHHHHHHHHHHHHHHhC---C
Confidence 3455 68888888872 2345677888874 5999999632 35589999999999999999999987 9
Q ss_pred eeecCCCCCCeEEcC-------------------CCCeEEccccCCCCCCCCCCc--------------ccccCcccccc
Q 004994 566 IVHGNFKSSNILLDE-------------------KLIVRVSDCGLAPLLFSGSTN--------------ELSEGLLTAHG 612 (720)
Q Consensus 566 ivHrDlkp~NiLl~~-------------------~~~~kl~DFGla~~~~~~~~~--------------~~~~~~~~~~~ 612 (720)
||||||||+|||++. ++.+|++|||+++........ .......+|++
T Consensus 101 IvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 180 (793)
T PLN00181 101 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSW 180 (793)
T ss_pred eeeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcc
Confidence 999999999999954 445666777776543110000 00011346788
Q ss_pred CCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcCCCCCchhhHHHHHHH
Q 004994 613 SGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRF 691 (720)
Q Consensus 613 ~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 691 (720)
|+|||++ ...|+.++|||||||+||||++|..|+..... .+... .....++.. .......
T Consensus 181 Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~----~~~~~----------~~~~~~~~~-----~~~~~~~ 241 (793)
T PLN00181 181 YTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSR----TMSSL----------RHRVLPPQI-----LLNWPKE 241 (793)
T ss_pred eEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHH----HHHHH----------HHhhcChhh-----hhcCHHH
Confidence 9999998 56799999999999999999999888743110 00000 000111110 0112345
Q ss_pred HHHHHHHhccCCCCCCCHHHHHHH
Q 004994 692 ADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 692 ~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.+++.+||+.+|.+||+|.|++++
T Consensus 242 ~~~~~~~L~~~P~~Rps~~eil~h 265 (793)
T PLN00181 242 ASFCLWLLHPEPSCRPSMSELLQS 265 (793)
T ss_pred HHHHHHhCCCChhhCcChHHHhhc
Confidence 688999999999999999999875
No 406
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.91 E-value=3.2e-25 Score=211.20 Aligned_cols=248 Identities=22% Similarity=0.345 Sum_probs=187.3
Q ss_pred CeeccCCCceEEEEEeCCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEeeCCCCCH
Q 004994 446 NFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDYGGNCTL 525 (720)
Q Consensus 446 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL 525 (720)
-+|.+...|+.|+|++..+ .+++|++.-........++|.+|.-.++-+.||||+.++|.|.......++..||+.|+|
T Consensus 196 tkl~e~hsgelwrgrwqgn-divakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~gsl 274 (448)
T KOG0195|consen 196 TKLAESHSGELWRGRWQGN-DIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFGSL 274 (448)
T ss_pred hhhccCCCcccccccccCc-chhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccchHH
Confidence 3578889999999998654 566677764333344457899999999999999999999999999999999999999999
Q ss_pred HHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCCCccccc
Q 004994 526 HDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSE 605 (720)
Q Consensus 526 ~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~~~~~ 605 (720)
+.++++. ..-..+..+..+.+.++|+|++|||+. .+-|.---|.+..+++|++.+++|+- +-+++.. ...
T Consensus 275 ynvlhe~--t~vvvd~sqav~faldiargmaflhsl-ep~ipr~~lns~hvmidedltarism-ad~kfsf------qe~ 344 (448)
T KOG0195|consen 275 YNVLHEQ--TSVVVDHSQAVRFALDIARGMAFLHSL-EPMIPRFYLNSKHVMIDEDLTARISM-ADTKFSF------QEV 344 (448)
T ss_pred HHHHhcC--ccEEEecchHHHHHHHHHhhHHHHhhc-chhhhhhhcccceEEecchhhhheec-ccceeee------ecc
Confidence 9999864 344566778899999999999999997 33344447899999999999988862 2122111 111
Q ss_pred CccccccCCCCccCCCC----CCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcCCCCCc
Q 004994 606 GLLTAHGSGAPEFESGS----YSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDG 681 (720)
Q Consensus 606 ~~~~~~~~~aPE~~~~~----~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 681 (720)
+..-.+.|++||.++.. .-.++|+|||++++||+.|.+.||.+-.+.+....+. .+.++..+.|
T Consensus 345 gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkia--------leglrv~ipp---- 412 (448)
T KOG0195|consen 345 GRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIA--------LEGLRVHIPP---- 412 (448)
T ss_pred ccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhh--------hccccccCCC----
Confidence 23345789999988442 2357999999999999999999997654433211111 1122222232
Q ss_pred hhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhC
Q 004994 682 AYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCMI 720 (720)
Q Consensus 682 ~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~ 720 (720)
..+..+.+++.-|+..||.+||.+..|+-.||+|+
T Consensus 413 ----gis~hm~klm~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 413 ----GISRHMNKLMNICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred ----CccHHHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence 33467889999999999999999999999999985
No 407
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.91 E-value=5e-24 Score=205.23 Aligned_cols=165 Identities=24% Similarity=0.303 Sum_probs=122.4
Q ss_pred CCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCCCcc
Q 004994 523 CTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNE 602 (720)
Q Consensus 523 gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~~ 602 (720)
|+|.+++... ...++|..+..++.|+++||+|||+. + ||+|||++.++.+|+ ||+++......
T Consensus 1 GsL~~~l~~~---~~~l~~~~~~~i~~qi~~~L~~lH~~---~------kp~Nil~~~~~~~~~--fG~~~~~~~~~--- 63 (176)
T smart00750 1 VSLADILEVR---GRPLNEEEIWAVCLQCLRALRELHRQ---A------KSGNILLTWDGLLKL--DGSVAFKTPEQ--- 63 (176)
T ss_pred CcHHHHHHHh---CCCCCHHHHHHHHHHHHHHHHHHHhc---C------CcccEeEcCccceee--ccceEeecccc---
Confidence 6888988632 34689999999999999999999987 3 999999999999999 99987653321
Q ss_pred cccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcCCCCC-
Q 004994 603 LSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLD- 680 (720)
Q Consensus 603 ~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 680 (720)
..++..|+|||.+ .+.++.++|||||||++|||+||+.||........ ..... ...+......
T Consensus 64 ----~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~--~~~~~---------~~~~~~~~~~~ 128 (176)
T smart00750 64 ----SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSA--ILEIL---------LNGMPADDPRD 128 (176)
T ss_pred ----CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcH--HHHHH---------HHHhccCCccc
Confidence 2467899999998 56799999999999999999999999964322110 00000 0000000000
Q ss_pred chhhHHHHH--HHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 681 GAYLAKSLS--RFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 681 ~~~~~~~~~--~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
......... ++.+++.+||..+|++||++.|+++++..+
T Consensus 129 ~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~ 169 (176)
T smart00750 129 RSNLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRAL 169 (176)
T ss_pred cccHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHH
Confidence 001122222 689999999999999999999999998754
No 408
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.90 E-value=4e-23 Score=217.49 Aligned_cols=166 Identities=20% Similarity=0.206 Sum_probs=127.4
Q ss_pred HhcCCCCCCeeccCCCceEEEEEeC--CCcEEEEEEeccccc---ccccHHHHHHHHHHHHccCCCceeE-EEeEeccCC
Q 004994 438 YTNSFSEGNFIGEGLLGSVYKAELP--GGKLLAVKKLSNTVS---QRQTDEEFLELASTISRLRHGNIVE-LIGYCNEHG 511 (720)
Q Consensus 438 ~~~~~~~~~~lg~G~~g~Vy~~~~~--~g~~vavK~l~~~~~---~~~~~~~~~~e~~~l~~l~H~niv~-l~~~~~~~~ 511 (720)
+...|...+.||+|+||+||+|... +++.||||++..... .....+.|.+|++++++++|+|++. ++++ +
T Consensus 16 ~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~----~ 91 (365)
T PRK09188 16 LSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT----G 91 (365)
T ss_pred ccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc----C
Confidence 3467889999999999999999653 578889998753311 1223567899999999999999985 4432 4
Q ss_pred eEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCC-CCCCeEEcCCCCeEEcccc
Q 004994 512 QHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNF-KSSNILLDEKLIVRVSDCG 590 (720)
Q Consensus 512 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDl-kp~NiLl~~~~~~kl~DFG 590 (720)
..++||||+++++|... .. .. ...++.+++++|.|||+. +|+|||| ||+|||++.++.+||+|||
T Consensus 92 ~~~LVmE~~~G~~L~~~-~~----~~------~~~~~~~i~~aL~~lH~~---gIiHrDL~KP~NILv~~~~~ikLiDFG 157 (365)
T PRK09188 92 KDGLVRGWTEGVPLHLA-RP----HG------DPAWFRSAHRALRDLHRA---GITHNDLAKPQNWLMGPDGEAAVIDFQ 157 (365)
T ss_pred CcEEEEEccCCCCHHHh-Cc----cc------hHHHHHHHHHHHHHHHHC---CCeeCCCCCcceEEEcCCCCEEEEECc
Confidence 57999999999999732 10 00 135778899999999987 9999999 9999999999999999999
Q ss_pred CCCCCCCCCCccc------ccCccccccCCCCccCCC
Q 004994 591 LAPLLFSGSTNEL------SEGLLTAHGSGAPEFESG 621 (720)
Q Consensus 591 la~~~~~~~~~~~------~~~~~~~~~~~aPE~~~~ 621 (720)
+|+.+........ -....+++.|++||+...
T Consensus 158 lA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~ 194 (365)
T PRK09188 158 LASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTP 194 (365)
T ss_pred cceecccCcchhhhhhhhhhhhhhccCccCCcccCCh
Confidence 9987754332111 123556778999998743
No 409
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.86 E-value=1.1e-20 Score=199.97 Aligned_cols=262 Identities=27% Similarity=0.379 Sum_probs=194.1
Q ss_pred CCCCCeeccCCCceEEEEEeCCCcEEEEEEecccccccc-cHHHHHHHHHHHHccCCC-ceeEEEeEeccCCeEEEEEee
Q 004994 442 FSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQ-TDEEFLELASTISRLRHG-NIVELIGYCNEHGQHLLVYDY 519 (720)
Q Consensus 442 ~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~-~~~~~~~e~~~l~~l~H~-niv~l~~~~~~~~~~~lv~e~ 519 (720)
|...+.||.|+||.||++... ..+++|.+........ ....|.+|+.+++.+.|+ +++++++++......+++++|
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 79 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY 79 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence 455678999999999999765 7899999986554433 577899999999999988 799999999777778999999
Q ss_pred CCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCC-CeEEccccCCCCCCCC
Q 004994 520 GGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKL-IVRVSDCGLAPLLFSG 598 (720)
Q Consensus 520 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~-~~kl~DFGla~~~~~~ 598 (720)
+.++++.+++...... ..+.......++.+++.++.|+|.. +++|||+||+||+++... .++++|||.++.+...
T Consensus 80 ~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~H~~---~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~ 155 (384)
T COG0515 80 VDGGSLEDLLKKIGRK-GPLSESEALFILAQILSALEYLHSK---GIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDP 155 (384)
T ss_pred CCCCcHHHHHHhcccc-cCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeecCCCCeEEEeccCcceecCCC
Confidence 9999999776432111 2577888999999999999999998 899999999999999988 7999999999865433
Q ss_pred CCcc----cccCccccccCCCCccCC----CCCCCccchHhHHHHHHHHHhCCCCCCCCCCc-cccchhhhcccccCchh
Q 004994 599 STNE----LSEGLLTAHGSGAPEFES----GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPR-GEQSLVRWAIPRLHDID 669 (720)
Q Consensus 599 ~~~~----~~~~~~~~~~~~aPE~~~----~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~-~~~~~~~~~~~~~~~~~ 669 (720)
.... ......++..|++||... ..++...|+||+|++++++++|..||...... ...............
T Consensus 156 ~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-- 233 (384)
T COG0515 156 GSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTP-- 233 (384)
T ss_pred CccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCc--
Confidence 2221 335577899999999984 36888999999999999999999997654321 000000000000000
Q ss_pred hhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 670 ALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 670 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.................+.+++.+|+..+|..|.++.+....
T Consensus 234 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 234 ----SLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred ----ccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 000000000001122467799999999999999998876653
No 410
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.86 E-value=1.5e-22 Score=227.13 Aligned_cols=255 Identities=24% Similarity=0.266 Sum_probs=185.8
Q ss_pred CCCeeccCCCceEEEEE-eCCCcEEEEEEec----ccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEe
Q 004994 444 EGNFIGEGLLGSVYKAE-LPGGKLLAVKKLS----NTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYD 518 (720)
Q Consensus 444 ~~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~----~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 518 (720)
...++|.|++|.|+.+. ....+.++.|..+ ...........+..|+.+-..+.|+|++..+..+.+....+-+||
T Consensus 322 ~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE 401 (601)
T KOG0590|consen 322 PGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSME 401 (601)
T ss_pred ccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhhh
Confidence 45789999999887773 3444555555443 222223333346778888899999999988888877766666699
Q ss_pred eCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCC
Q 004994 519 YGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSG 598 (720)
Q Consensus 519 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~ 598 (720)
|++. +|..++... ..+....+-.++.|+..|+.|+|.. +|.|||+|++|++++.+|.+||+|||.+....-.
T Consensus 402 ~~~~-Dlf~~~~~~----~~~~~~e~~c~fKqL~~Gv~y~h~~---GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~ 473 (601)
T KOG0590|consen 402 YCPY-DLFSLVMSN----GKLTPLEADCFFKQLLRGVKYLHSM---GLAHRDLKLENLLVTENGILKIIDFGAASVFRYP 473 (601)
T ss_pred cccH-HHHHHHhcc----cccchhhhhHHHHHHHHHHHHHHhc---CceeccCccccEEEecCCceEEeecCcceeeccC
Confidence 9999 999988532 3566777889999999999999998 9999999999999999999999999998765433
Q ss_pred CCc--ccccCccccccCCCCccCC-CCCCC-ccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhh
Q 004994 599 STN--ELSEGLLTAHGSGAPEFES-GSYSC-QSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRM 674 (720)
Q Consensus 599 ~~~--~~~~~~~~~~~~~aPE~~~-~~~~~-~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (720)
... ....+..|.-.|+|||... .+|++ ..||||.|||+..|++|+.||......+... .. ........
T Consensus 474 ~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~-~~-----~~~~~~~~-- 545 (601)
T KOG0590|consen 474 WEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSF-KT-----NNYSDQRN-- 545 (601)
T ss_pred cchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccch-hh-----hccccccc--
Confidence 222 4566788899999999994 46766 5899999999999999999996533222110 00 00000000
Q ss_pred cCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 675 VDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 675 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
...-........+.+.+.++.++|+.||.+|-|+++|++.
T Consensus 546 -~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d 585 (601)
T KOG0590|consen 546 -IFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILND 585 (601)
T ss_pred -cccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhhC
Confidence 0000011223445677899999999999999999999863
No 411
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.86 E-value=8.8e-21 Score=200.57 Aligned_cols=258 Identities=19% Similarity=0.226 Sum_probs=187.6
Q ss_pred CCCCCCeeccCCCceEEEEEeCC--CcEEEEEEecccccccccHHHHHHHHHHHHccCC----CceeEEEeEe-ccCCeE
Q 004994 441 SFSEGNFIGEGLLGSVYKAELPG--GKLLAVKKLSNTVSQRQTDEEFLELASTISRLRH----GNIVELIGYC-NEHGQH 513 (720)
Q Consensus 441 ~~~~~~~lg~G~~g~Vy~~~~~~--g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H----~niv~l~~~~-~~~~~~ 513 (720)
.|...+.||+|+||.||+|.... ...+|+|.-....... . ..+..|..++..+.+ +++..+++.. ...+..
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~-~-~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~ 96 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSK-P-SVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFN 96 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCC-C-ccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCcee
Confidence 78899999999999999996544 3578888876432211 1 156677888888763 6899999988 477788
Q ss_pred EEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCC-----CCeEEcc
Q 004994 514 LLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEK-----LIVRVSD 588 (720)
Q Consensus 514 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~-----~~~kl~D 588 (720)
++||+.+.. +|.++..... ...++..+..+|+.|+..+|.+||+. |+|||||||+|+++... ..+.|.|
T Consensus 97 ~iVM~l~G~-sL~dl~~~~~--~~~fs~~T~l~ia~q~l~~l~~lH~~---G~iHRDiKp~N~~~g~~~~~~~~~~~llD 170 (322)
T KOG1164|consen 97 FIVMSLLGP-SLEDLRKRNP--PGRFSRKTVLRIAIQNLNALEDLHSK---GFIHRDIKPENFVVGQSSRSEVRTLYLLD 170 (322)
T ss_pred EEEEeccCc-cHHHHHHhCC--CCCcCHhHHHHHHHHHHHHHHHHHhc---CcccCCcCHHHeeecCCCCcccceEEEEe
Confidence 999988654 8999775433 46789999999999999999999998 99999999999999765 4699999
Q ss_pred ccCCC--CCCCCCCc--c---c-ccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhh
Q 004994 589 CGLAP--LLFSGSTN--E---L-SEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVR 659 (720)
Q Consensus 589 FGla~--~~~~~~~~--~---~-~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~ 659 (720)
||+|+ ........ . . .....||..|.++... ..+.+.+.|+||++.++.|++.|..||.............
T Consensus 171 fGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~ 250 (322)
T KOG1164|consen 171 FGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFE 250 (322)
T ss_pred cCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHH
Confidence 99998 33221111 1 1 2245588999998876 4578999999999999999999999996543221111000
Q ss_pred hcccccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 660 WAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 660 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
.. ........ .....+.++.++...+-..+..++|....+...+++.
T Consensus 251 ~~--------~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~ 297 (322)
T KOG1164|consen 251 KD--------PRKLLTDR-----FGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDV 297 (322)
T ss_pred HH--------hhhhcccc-----ccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHH
Confidence 00 00000000 1112335677777777779999999999998887654
No 412
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.84 E-value=2.7e-20 Score=182.91 Aligned_cols=255 Identities=17% Similarity=0.217 Sum_probs=193.3
Q ss_pred cCCCCCCeeccCCCceEEEE-EeCCCcEEEEEEecccccccccHHHHHHHHHHHHccC-CCceeEEEeEeccCCeEEEEE
Q 004994 440 NSFSEGNFIGEGLLGSVYKA-ELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLR-HGNIVELIGYCNEHGQHLLVY 517 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~-~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~~~~~~~~~~~lv~ 517 (720)
-.|.++++||+|+||+++.| .+-+++.||||.=.. +....++..|.+..+.|. .++|..+|-|..++-+-.||+
T Consensus 28 ~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPr----kS~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVi 103 (449)
T KOG1165|consen 28 PHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPR----KSEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVI 103 (449)
T ss_pred ccceeccccccCcceeeecccccccCceEEEEeccc----cCCcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhh
Confidence 47889999999999999999 567899999997432 234457778888888884 689999998888888889999
Q ss_pred eeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCC-----CCeEEccccCC
Q 004994 518 DYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEK-----LIVRVSDCGLA 592 (720)
Q Consensus 518 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~-----~~~kl~DFGla 592 (720)
|++.. ||+|+..- ..+.|+.++...||.|+..-++|+|+. .+|.|||||+|+||... ..+.|+|||+|
T Consensus 104 dLLGP-SLEDLFD~---CgR~FSvKTV~miA~Qmi~rie~vH~k---~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmA 176 (449)
T KOG1165|consen 104 DLLGP-SLEDLFDL---CGRRFSVKTVAMIAKQMITRIEYVHEK---DLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMA 176 (449)
T ss_pred hhhCc-CHHHHHHH---hcCcccHHhHHHHHHHHHHHHHHHHhc---ceeecccCccceeecCCCCCCCceEEEEeccch
Confidence 99765 89998853 357799999999999999999999997 89999999999999643 36899999999
Q ss_pred CCCCCCCCccc-----ccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccC
Q 004994 593 PLLFSGSTNEL-----SEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLH 666 (720)
Q Consensus 593 ~~~~~~~~~~~-----~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~ 666 (720)
+.+.+..+... .....||..||+=-.. +.+.+.+-|+=|+|-+++.++.|..||.+.....-
T Consensus 177 K~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tn------------ 244 (449)
T KOG1165|consen 177 KEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTN------------ 244 (449)
T ss_pred hhhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcch------------
Confidence 98876554332 3356788999976543 55789999999999999999999999976432110
Q ss_pred chhhhhhhcCCCC---CchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q 004994 667 DIDALSRMVDPSL---DGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLC 718 (720)
Q Consensus 667 ~~~~~~~~~~~~~---~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 718 (720)
.+...++-+..- .....+..+.+|...+.-.-..+-++-|..+-+..-+.+
T Consensus 245 -K~kYeKIGe~Kr~T~i~~Lc~g~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf~d 298 (449)
T KOG1165|consen 245 -KEKYEKIGETKRSTPIEVLCEGFPEEFATYLRYVRRLDFFETPDYDYLRKLFDD 298 (449)
T ss_pred -HHHHHHhccccccCCHHHHHhcCHHHHHHHHHHHHhcCcccCCCHHHHHHHHHH
Confidence 011111111110 111223345677788888778888888988876655544
No 413
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.84 E-value=1.1e-20 Score=177.88 Aligned_cols=255 Identities=18% Similarity=0.227 Sum_probs=191.2
Q ss_pred hcCCCCCCeeccCCCceEEEE-EeCCCcEEEEEEecccccccccHHHHHHHHHHHHccCC-CceeEEEeEeccCCeEEEE
Q 004994 439 TNSFSEGNFIGEGLLGSVYKA-ELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRH-GNIVELIGYCNEHGQHLLV 516 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~-~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H-~niv~l~~~~~~~~~~~lv 516 (720)
...|...+.||.|+||.+|.| ...+|..||||+=+.... ..++..|.++.+.|+| ..|..+..|..+...-.+|
T Consensus 14 ~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~----hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlV 89 (341)
T KOG1163|consen 14 GGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAK----HPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLV 89 (341)
T ss_pred ccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCC----CcchhHHHHHHHHhccCCCCchhhhhccccccceee
Confidence 467888999999999999999 567899999998654432 2356778888888875 6888888899999999999
Q ss_pred EeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCC---CCeEEccccCCC
Q 004994 517 YDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEK---LIVRVSDCGLAP 593 (720)
Q Consensus 517 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~---~~~kl~DFGla~ 593 (720)
||.+.. +|+++..-. .+.++..+.+-++.|+..-++|+|.. ++|||||||+|+|..-+ ..+.++|||+|+
T Consensus 90 MdLLGP-sLEdLfnfC---~R~ftmkTvLMLaDQml~RiEyvH~r---~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaK 162 (341)
T KOG1163|consen 90 MDLLGP-SLEDLFNFC---SRRFTMKTVLMLADQMLSRIEYVHLR---NFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAK 162 (341)
T ss_pred eeccCc-cHHHHHHHH---hhhhhHHhHHHHHHHHHHHHHHHHhh---ccccccCCccceeeccccccceEEEEeccchh
Confidence 999765 999988543 46788899999999999999999987 89999999999999643 368999999999
Q ss_pred CCCCCCCccc-----ccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCc
Q 004994 594 LLFSGSTNEL-----SEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHD 667 (720)
Q Consensus 594 ~~~~~~~~~~-----~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~ 667 (720)
.+.+..+... .....||..|.+--.. .-+.+.+.|+=|+|.+|..+-.|..||.+........
T Consensus 163 ky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~Q----------- 231 (341)
T KOG1163|consen 163 KYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQ----------- 231 (341)
T ss_pred hhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHH-----------
Confidence 8765443322 2345677777754433 3356788999999999999999999997654322111
Q ss_pred hhhhhhhcCCCC---CchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 004994 668 IDALSRMVDPSL---DGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLL 717 (720)
Q Consensus 668 ~~~~~~~~~~~~---~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 717 (720)
..+++.+... ........+.+|.-.+.-|-..--++-|...-+-+..+
T Consensus 232 --KyEkI~EkK~s~~ie~LC~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFr 282 (341)
T KOG1163|consen 232 --KYEKISEKKMSTPIEVLCKGFPAEFAMYLNYCRGLGFEEKPDYMYLRQLFR 282 (341)
T ss_pred --HHHHHHHhhcCCCHHHHhCCCcHHHHHHHHHHhhcCCCCCCcHHHHHHHHH
Confidence 1111111111 11223334567888899999988888898877666544
No 414
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.83 E-value=1.7e-20 Score=181.92 Aligned_cols=141 Identities=17% Similarity=0.147 Sum_probs=106.6
Q ss_pred CCeeccCCCceEEEEEeCCCcEEEEEEeccccccccc-------HH-----------------HHHHHHHHHHccCCCce
Q 004994 445 GNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQT-------DE-----------------EFLELASTISRLRHGNI 500 (720)
Q Consensus 445 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~-------~~-----------------~~~~e~~~l~~l~H~ni 500 (720)
...||+|+||.||+|...+|+.||||+++........ .. ....|++.+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 3679999999999998778999999999754321111 01 22348899999988776
Q ss_pred eEEEeEeccCCeEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHH-HhcCCCCeeecCCCCCCeEEc
Q 004994 501 VELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYL-QEVCEPPIVHGNFKSSNILLD 579 (720)
Q Consensus 501 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~L-H~~~~~~ivHrDlkp~NiLl~ 579 (720)
.....+... ..++||||++++++...... ...+++....+++.+++.+|.|+ |.. +|+||||||+|||++
T Consensus 82 ~~p~~~~~~--~~~iVmE~i~g~~l~~~~~~----~~~~~~~~~~~i~~qi~~~L~~l~H~~---giiHrDlkP~NIli~ 152 (190)
T cd05147 82 PCPEPILLK--SHVLVMEFIGDDGWAAPRLK----DAPLSESKARELYLQVIQIMRILYQDC---RLVHADLSEYNLLYH 152 (190)
T ss_pred CCCcEEEec--CCEEEEEEeCCCCCcchhhh----cCCCCHHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEE
Confidence 433322222 23899999998776544321 24578888999999999999999 555 899999999999998
Q ss_pred CCCCeEEccccCCCCC
Q 004994 580 EKLIVRVSDCGLAPLL 595 (720)
Q Consensus 580 ~~~~~kl~DFGla~~~ 595 (720)
++.++|+|||+|...
T Consensus 153 -~~~v~LiDFG~a~~~ 167 (190)
T cd05147 153 -DGKLYIIDVSQSVEH 167 (190)
T ss_pred -CCcEEEEEccccccC
Confidence 478999999999754
No 415
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.82 E-value=2.3e-20 Score=199.74 Aligned_cols=215 Identities=25% Similarity=0.422 Sum_probs=160.5
Q ss_pred HHccCCCceeEEEeEeccCCeEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCC
Q 004994 492 ISRLRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNF 571 (720)
Q Consensus 492 l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDl 571 (720)
|+.+.|.|+.+++|.+.++...+.|.+|+.-|+|.|.+.. ....++|.....++.++++||+|+|.. +--.|+.+
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~---~~~~~d~~F~~s~~rdi~~Gl~ylh~s--~i~~hg~l 75 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSN---EDIKLDYFFILSFIRDISKGLAYLHNS--PIGYHGAL 75 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhc---cccCccHHHHHHHHHHHHHHHHHHhcC--cceeeeee
Confidence 3568999999999999999999999999999999999965 346789999999999999999999986 23399999
Q ss_pred CCCCeEEcCCCCeEEccccCCCCCCCCCCcccccCccccccCCCCccCCCC--------CCCccchHhHHHHHHHHHhCC
Q 004994 572 KSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFESGS--------YSCQSDVYSLGVVMLELLTGR 643 (720)
Q Consensus 572 kp~NiLl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~--------~~~~~Dv~S~Gvvl~elltG~ 643 (720)
+++|+++|..+.+||+|||+....................-|.|||.+.+. .+.+.||||||++++|+++.+
T Consensus 76 ~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~ 155 (484)
T KOG1023|consen 76 KSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRS 155 (484)
T ss_pred ccccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhcc
Confidence 999999999999999999998776431111111122234457899987442 467899999999999999999
Q ss_pred CCCCCCCCccc-cchhhhcccccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 644 KPYDRSRPRGE-QSLVRWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 644 ~Pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
.||+....... ..++..+.. .....+.|.+... .+..+++..++.+||..+|++||++++|-..++.+
T Consensus 156 ~~~~~~~~~~~~~eii~~~~~------~~~~~~rP~i~~~--~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~ 224 (484)
T KOG1023|consen 156 GPFDLRNLVEDPDEIILRVKK------GGSNPFRPSIELL--NELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTI 224 (484)
T ss_pred CccccccccCChHHHHHHHHh------cCCCCcCcchhhh--hhcchHHHHHHHHhcccChhhCccHHHHHhhhhhh
Confidence 99986433221 112221110 0111122222211 14445788999999999999999999998887754
No 416
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.82 E-value=1.7e-19 Score=175.59 Aligned_cols=141 Identities=18% Similarity=0.127 Sum_probs=109.5
Q ss_pred CCeeccCCCceEEEEEeCCCcEEEEEEeccccccccc------------------------HHHHHHHHHHHHccCCCce
Q 004994 445 GNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQT------------------------DEEFLELASTISRLRHGNI 500 (720)
Q Consensus 445 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~------------------------~~~~~~e~~~l~~l~H~ni 500 (720)
.+.||+|++|.||+|...+|+.||||+++........ ...+..|.+.+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 4679999999999998778999999999764321100 1224578899999999987
Q ss_pred eEEEeEeccCCeEEEEEeeCCCCCHHHH-hhccchhccccCHHHHHHHHHHHHHHHHHHHh-cCCCCeeecCCCCCCeEE
Q 004994 501 VELIGYCNEHGQHLLVYDYGGNCTLHDL-LHSDEEAHKKFSWNIRIRVALGAARALQYLQE-VCEPPIVHGNFKSSNILL 578 (720)
Q Consensus 501 v~l~~~~~~~~~~~lv~e~~~~gsL~~~-l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~-~~~~~ivHrDlkp~NiLl 578 (720)
.....+... ..++||||++++++... +. ...++.....+++.+++.++.++|+ . +|+||||||+|||+
T Consensus 82 ~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~-----~~~~~~~~~~~i~~~l~~~l~~lH~~~---givHrDlkP~NIll 151 (190)
T cd05145 82 PVPEPILLK--KNVLVMEFIGDDGSPAPRLK-----DVPLEEEEAEELYEQVVEQMRRLYQEA---GLVHGDLSEYNILY 151 (190)
T ss_pred CCceEEEec--CCEEEEEEecCCCchhhhhh-----hccCCHHHHHHHHHHHHHHHHHHHHhC---CEecCCCChhhEEE
Confidence 544443332 24899999998755433 32 1345677888999999999999998 6 99999999999999
Q ss_pred cCCCCeEEccccCCCCCC
Q 004994 579 DEKLIVRVSDCGLAPLLF 596 (720)
Q Consensus 579 ~~~~~~kl~DFGla~~~~ 596 (720)
+ ++.++|+|||+|..+.
T Consensus 152 ~-~~~~~liDFG~a~~~~ 168 (190)
T cd05145 152 H-DGKPYIIDVSQAVELD 168 (190)
T ss_pred E-CCCEEEEEcccceecC
Confidence 9 8899999999997663
No 417
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.81 E-value=2.9e-20 Score=182.01 Aligned_cols=172 Identities=13% Similarity=0.154 Sum_probs=131.3
Q ss_pred HhcCCCCCCeeccCCCceEEEEEeCCCcEEEEEEeccccccccc-H------HHHHHHHHHHHccCCCceeEEEeEeccC
Q 004994 438 YTNSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQT-D------EEFLELASTISRLRHGNIVELIGYCNEH 510 (720)
Q Consensus 438 ~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~-~------~~~~~e~~~l~~l~H~niv~l~~~~~~~ 510 (720)
..++|...+++|.|+||.||.++. ++..+|||.+.+....... . +.+.+|++.+.++.|++|..+..++...
T Consensus 29 l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~ 107 (232)
T PRK10359 29 LSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLA 107 (232)
T ss_pred hhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeec
Confidence 468899999999999999999765 5668999999755432211 1 2267899999999999999998886532
Q ss_pred --------CeEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCC
Q 004994 511 --------GQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKL 582 (720)
Q Consensus 511 --------~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~ 582 (720)
+..++||||++|.+|.++.. ++. ....+++.++..+|.. +++|||+||+||++++++
T Consensus 108 ~~~~~~~~~~~~lvmEyi~G~tL~~~~~--------~~~----~~~~~i~~~l~~lH~~---gi~H~Dikp~Nili~~~g 172 (232)
T PRK10359 108 ERKTLRYAHTYIMLIEYIEGVELNDMPE--------ISE----DVKAKIKASIESLHQH---GMVSGDPHKGNFIVSKNG 172 (232)
T ss_pred ccccccccCCeEEEEEEECCccHHHhhh--------ccH----HHHHHHHHHHHHHHHc---CCccCCCChHHEEEeCCC
Confidence 35789999999999987642 111 2455888999999987 999999999999999998
Q ss_pred CeEEccccCCCCCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHH
Q 004994 583 IVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELL 640 (720)
Q Consensus 583 ~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ell 640 (720)
++|+|||............ .+. ...|+.++|+|||||.+..+.
T Consensus 173 -i~liDfg~~~~~~e~~a~d--------------~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 173 -LRIIDLSGKRCTAQRKAKD--------------RIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred -EEEEECCCcccccchhhHH--------------HHHHHhHhcccccccceeEeehHHH
Confidence 9999999876542211100 011 334678999999999987654
No 418
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.80 E-value=4.7e-19 Score=169.59 Aligned_cols=186 Identities=16% Similarity=0.056 Sum_probs=134.0
Q ss_pred CCCeeccCCCceEEEEEeCCCcEEEEEEeccccc--ccccHHHHHHHHHHHHccC-CCceeEEEeEeccCCeEEEEEeeC
Q 004994 444 EGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVS--QRQTDEEFLELASTISRLR-HGNIVELIGYCNEHGQHLLVYDYG 520 (720)
Q Consensus 444 ~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~--~~~~~~~~~~e~~~l~~l~-H~niv~l~~~~~~~~~~~lv~e~~ 520 (720)
+...|++|+||+||.+.. ++..++.+.+..... .......|.+|+++|+++. |++|++++++ +..+++|||+
T Consensus 6 ~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmeyI 80 (218)
T PRK12274 6 VNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSYL 80 (218)
T ss_pred cceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEeee
Confidence 457899999999998865 677888887764321 1112235889999999995 5889999886 3479999999
Q ss_pred CCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCC-CCCCeEEcCCCCeEEccccCCCCCCCCC
Q 004994 521 GNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNF-KSSNILLDEKLIVRVSDCGLAPLLFSGS 599 (720)
Q Consensus 521 ~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDl-kp~NiLl~~~~~~kl~DFGla~~~~~~~ 599 (720)
.+.+|.+.... ....++.+++++|.++|.. +|||||| ||+|||++.++.++|+|||+|.......
T Consensus 81 ~G~~L~~~~~~-----------~~~~~~~qi~~~L~~lH~~---GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~ 146 (218)
T PRK12274 81 AGAAMYQRPPR-----------GDLAYFRAARRLLQQLHRC---GVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRA 146 (218)
T ss_pred cCccHHhhhhh-----------hhHHHHHHHHHHHHHHHHC---cCccCCCCCcceEEEcCCCCEEEEECCCceecCCcc
Confidence 99888754321 0134677889999999987 9999999 7999999999999999999998654322
Q ss_pred Cc--ccc---------cCccccccCCCCccC--CCCCC-CccchHhHHHHHHHHHhCCCCCCC
Q 004994 600 TN--ELS---------EGLLTAHGSGAPEFE--SGSYS-CQSDVYSLGVVMLELLTGRKPYDR 648 (720)
Q Consensus 600 ~~--~~~---------~~~~~~~~~~aPE~~--~~~~~-~~~Dv~S~Gvvl~elltG~~Pf~~ 648 (720)
.. ... .-...++.|++|+-. ....+ ...++++-|.-+|.++||+.|+-.
T Consensus 147 ~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~ 209 (218)
T PRK12274 147 RWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWE 209 (218)
T ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccc
Confidence 10 000 001123444555432 11233 567899999999999999988754
No 419
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.79 E-value=2.6e-20 Score=198.80 Aligned_cols=227 Identities=20% Similarity=0.238 Sum_probs=174.9
Q ss_pred eeccCCCceEEEEE----eCCCcEEEEEEecccccccccHHHHHHHHHHHHccC-CCceeEEEeEeccCCeEEEEEeeCC
Q 004994 447 FIGEGLLGSVYKAE----LPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLR-HGNIVELIGYCNEHGQHLLVYDYGG 521 (720)
Q Consensus 447 ~lg~G~~g~Vy~~~----~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~~~~~~~~~~~lv~e~~~ 521 (720)
++|+|.||.|+.++ .+.|..+|+|++++.............|..++...+ ||.+|++...+......+++.+|..
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r 80 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR 80 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence 37999999999873 345888999998765332222224556677888886 9999999999999999999999999
Q ss_pred CCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCCCc
Q 004994 522 NCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTN 601 (720)
Q Consensus 522 ~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~ 601 (720)
+|.+...+... ..+.......+...++-++.++|.. +|+|||+|++||+++.+|++|+.|||+++.......
T Consensus 81 gg~lft~l~~~----~~f~~~~~~~~~aelaLald~lh~l---~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~- 152 (612)
T KOG0603|consen 81 GGDLFTRLSKE----VMFDELDVAFYLAELALALDHLHKL---GIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKI- 152 (612)
T ss_pred cchhhhccccC----CchHHHHHHHHHHHHHHHHhhcchh---HHHHhcccccceeecccCccccCCchhhhHhHhhhh-
Confidence 99998877432 3445555555666778889999988 999999999999999999999999999987644322
Q ss_pred ccccCccccccCCCCccCCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcCCCCCc
Q 004994 602 ELSEGLLTAHGSGAPEFESGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDG 681 (720)
Q Consensus 602 ~~~~~~~~~~~~~aPE~~~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 681 (720)
..|+..|||||+.. .....+|.||||++++||+||..||.. +....+.... .
T Consensus 153 -----~cgt~eymApEI~~-gh~~a~D~ws~gvl~felltg~~pf~~--------------------~~~~~Il~~~--~ 204 (612)
T KOG0603|consen 153 -----ACGTYEYRAPEIIN-GHLSAADWWSFGVLAFELLTGTLPFGG--------------------DTMKRILKAE--L 204 (612)
T ss_pred -----cccchhhhhhHhhh-ccCCcccchhhhhhHHHHhhCCCCCch--------------------HHHHHHhhhc--c
Confidence 16789999999987 456789999999999999999999964 1111111111 1
Q ss_pred hhhHHHHHHHHHHHHHHhccCCCCCCCH
Q 004994 682 AYLAKSLSRFADIISRCVQWEPGFRPPM 709 (720)
Q Consensus 682 ~~~~~~~~~l~~l~~~cl~~dP~~RPt~ 709 (720)
..+.+....+.+++..++..+|..|--.
T Consensus 205 ~~p~~l~~~a~~~~~~l~~r~p~nrLg~ 232 (612)
T KOG0603|consen 205 EMPRELSAEARSLFRQLFKRNPENRLGA 232 (612)
T ss_pred CCchhhhHHHHHHHHHHHhhCHHHHhcc
Confidence 2344556677899999999999999654
No 420
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.78 E-value=4.7e-21 Score=171.17 Aligned_cols=170 Identities=29% Similarity=0.500 Sum_probs=153.9
Q ss_pred cCceeEEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCCCcc--ccCcEEEecCCcCCCCCcchhhccccccccc
Q 004994 70 FSNVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSNLP--VTVRNFSLSGNQLTGSIPESLSRLTQLLDLS 147 (720)
Q Consensus 70 ~~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~--~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ 147 (720)
+.+++.|.|++|+|+ .+|+.+..|.+|+.|++++|+++ .+|..+. ++|+.|+++-|++. .+|..|+.++.|+.||
T Consensus 32 ~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levld 108 (264)
T KOG0617|consen 32 MSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVLD 108 (264)
T ss_pred hhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhhhh
Confidence 578899999999999 67889999999999999999999 9999987 78999999999999 9999999999999999
Q ss_pred ccccccCC-CCCchhcCCCCCceEeccCCcccccCCCCCCCCCCCceeeccccccccccccccccc-cceEEccCCcCcc
Q 004994 148 LNNNHLNG-GIPDAFHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNNKLSGTLNVLEDLH-LIDLNIENNLFSG 225 (720)
Q Consensus 148 l~~N~l~g-~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~-l~~l~l~~N~l~g 225 (720)
|..|+++. .+|..|..+..|+.|+|++|.+. .+|..+++|++|+.|.+..|.+-..+..++.+. |++|++.+|+++
T Consensus 109 ltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll~lpkeig~lt~lrelhiqgnrl~- 186 (264)
T KOG0617|consen 109 LTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLLSLPKEIGDLTRLRELHIQGNRLT- 186 (264)
T ss_pred ccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchhhCcHHHHHHHHHHHHhcccceee-
Confidence 99999964 68999999999999999999998 899999999999999999999998888888776 999999999999
Q ss_pred cCCcccCCCcc------ccccCccC
Q 004994 226 PIPEKLLSIPN------FRKDGNPF 244 (720)
Q Consensus 226 ~~p~~~~~l~~------l~~~~n~~ 244 (720)
.+|.+++++.- ++...|||
T Consensus 187 vlppel~~l~l~~~k~v~r~E~NPw 211 (264)
T KOG0617|consen 187 VLPPELANLDLVGNKQVMRMEENPW 211 (264)
T ss_pred ecChhhhhhhhhhhHHHHhhhhCCC
Confidence 88888876542 33455555
No 421
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.77 E-value=1.6e-19 Score=201.62 Aligned_cols=250 Identities=19% Similarity=0.174 Sum_probs=176.3
Q ss_pred CCCCCCeeccCCCceEEEEEeCCCcEEEEEEecccccc--cccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEe
Q 004994 441 SFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQ--RQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYD 518 (720)
Q Consensus 441 ~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 518 (720)
++...+.||.+.|=+|.+|+.+.|. |+||++.+.... -..-++-.+|++ ...++|||++++.-+-.....-|||=+
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvRq 101 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVRQ 101 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHHH
Confidence 4555688999999999999888886 999998643211 122233445555 556699999998777666666778888
Q ss_pred eCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCC--C
Q 004994 519 YGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLL--F 596 (720)
Q Consensus 519 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~--~ 596 (720)
|..+ +|+|.+. .+.-+...+..-|+.|+..||.-+|.. +|+|+|||.+|||++.-..+.|+||..-+.. .
T Consensus 102 yvkh-nLyDRlS----TRPFL~~iEKkWiaFQLL~al~qcH~~---gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLP 173 (1431)
T KOG1240|consen 102 YVKH-NLYDRLS----TRPFLVLIEKKWIAFQLLKALSQCHKL---GVCHGDIKSENILITSWNWLYLTDFASFKPTYLP 173 (1431)
T ss_pred HHhh-hhhhhhc----cchHHHHHHHHHHHHHHHHHHHHHHHc---CccccccccceEEEeeechhhhhcccccCCccCC
Confidence 8766 7888774 345566777888999999999999988 9999999999999999999999999865433 2
Q ss_pred CCCCc---ccccCccccccCCCCccC-C-C----------CCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhh
Q 004994 597 SGSTN---ELSEGLLTAHGSGAPEFE-S-G----------SYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRW 660 (720)
Q Consensus 597 ~~~~~---~~~~~~~~~~~~~aPE~~-~-~----------~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~ 660 (720)
.+... .+.........|.|||.+ . + ..+++-||||.|||++|+++ |++||.-. .+..+
T Consensus 174 eDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LS------QL~aY 247 (1431)
T KOG1240|consen 174 EDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLS------QLLAY 247 (1431)
T ss_pred CCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHH------HHHhH
Confidence 22211 122222233469999976 2 1 14567899999999999988 89998531 11111
Q ss_pred cccccCchh-hhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q 004994 661 AIPRLHDID-ALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLC 718 (720)
Q Consensus 661 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 718 (720)
....-.+.+ .++++-| ..+++++..|++.||++|.++++.|+.-+.
T Consensus 248 r~~~~~~~e~~Le~Ied------------~~~Rnlil~Mi~rdPs~RlSAedyL~~yrG 294 (1431)
T KOG1240|consen 248 RSGNADDPEQLLEKIED------------VSLRNLILSMIQRDPSKRLSAEDYLQKYRG 294 (1431)
T ss_pred hccCccCHHHHHHhCcC------------ccHHHHHHHHHccCchhccCHHHHHHhhhc
Confidence 111111111 2222222 246799999999999999999999987554
No 422
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.77 E-value=9.3e-19 Score=176.56 Aligned_cols=233 Identities=21% Similarity=0.299 Sum_probs=146.0
Q ss_pred CCCCeeccCCCceEEEEEe-CCCcEEEEEEeccc-ccccccHHHHHHHHHHHHccCC----------CceeEEEeEe---
Q 004994 443 SEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNT-VSQRQTDEEFLELASTISRLRH----------GNIVELIGYC--- 507 (720)
Q Consensus 443 ~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~-~~~~~~~~~~~~e~~~l~~l~H----------~niv~l~~~~--- 507 (720)
..++.||.|+++.||.++. ++|+.+|||+.... .......+++.+|.-....+.+ -.++.-++..
T Consensus 15 ~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i~ 94 (288)
T PF14531_consen 15 VRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRIP 94 (288)
T ss_dssp EEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEET
T ss_pred EEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEEc
Confidence 3467899999999999965 56999999997533 2233445677777655544333 1222222211
Q ss_pred ------ccC---C-----eEEEEEeeCCCCCHHHHhhcc---chhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecC
Q 004994 508 ------NEH---G-----QHLLVYDYGGNCTLHDLLHSD---EEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGN 570 (720)
Q Consensus 508 ------~~~---~-----~~~lv~e~~~~gsL~~~l~~~---~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrD 570 (720)
... . ..+++|+-+ .++|.+++..- ......+....++.+..|+.+.+++||+. |+||+|
T Consensus 95 ~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~---GlVHgd 170 (288)
T PF14531_consen 95 GKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSY---GLVHGD 170 (288)
T ss_dssp TS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEEEST
T ss_pred CCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhc---ceEecc
Confidence 111 1 235677776 45888876431 11123345566788889999999999998 999999
Q ss_pred CCCCCeEEcCCCCeEEccccCCCCCCCCCCcccccCccccccCCCCccCCC---------CCCCccchHhHHHHHHHHHh
Q 004994 571 FKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFESG---------SYSCQSDVYSLGVVMLELLT 641 (720)
Q Consensus 571 lkp~NiLl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~---------~~~~~~Dv~S~Gvvl~ellt 641 (720)
|||+|++++.+|.++|+||+....... .. .. ...+.+|.+||.... .++.+.|.|++|+++|.|+.
T Consensus 171 i~~~nfll~~~G~v~Lg~F~~~~r~g~--~~--~~-~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC 245 (288)
T PF14531_consen 171 IKPENFLLDQDGGVFLGDFSSLVRAGT--RY--RC-SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWC 245 (288)
T ss_dssp -SGGGEEE-TTS-EEE--GGGEEETTE--EE--EG-GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHH
T ss_pred cceeeEEEcCCCCEEEcChHHHeecCc--ee--ec-cCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHH
Confidence 999999999999999999987654321 11 11 233467889997621 37889999999999999999
Q ss_pred CCCCCCCCCCccccchhhhcccccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCC
Q 004994 642 GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFR 706 (720)
Q Consensus 642 G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~R 706 (720)
|+.||+...+.... .| .+ ..+.+.++.+.+|+..+|+.+|.+|
T Consensus 246 ~~lPf~~~~~~~~~---~~-----------------~f--~~C~~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 246 GRLPFGLSSPEADP---EW-----------------DF--SRCRDMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp SS-STCCCGGGSTS---GG-----------------GG--TTSS---HHHHHHHHHHT-SSGGGS
T ss_pred ccCCCCCCCccccc---cc-----------------cc--hhcCCcCHHHHHHHHHHccCCcccC
Confidence 99999764322111 00 01 1112566789999999999999988
No 423
>PRK10345 hypothetical protein; Provisional
Probab=99.75 E-value=1.5e-17 Score=162.70 Aligned_cols=137 Identities=19% Similarity=0.212 Sum_probs=104.0
Q ss_pred CCCCCeeccCCCceEEEEEeCCCcEEEEEEecccccccccHHHHHHHHHHHHcc-----CCCceeEEEeEeccCC---eE
Q 004994 442 FSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRL-----RHGNIVELIGYCNEHG---QH 513 (720)
Q Consensus 442 ~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l-----~H~niv~l~~~~~~~~---~~ 513 (720)
+...+.||+|+||.||. .-.++.. +||++.... ....+.+.+|+++++.+ .||||++++|++.+.. ..
T Consensus 4 L~~~~~LG~G~~~~Vy~-hp~~~~k-~IKv~~~~~--~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v 79 (210)
T PRK10345 4 LSEQSPLGTGRHRKCYA-HPEDAQR-CIKIVYHRG--DGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYV 79 (210)
T ss_pred cCCcceecCCCceEEEE-CCCCcCe-EEEEEeccc--cchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEE
Confidence 34568899999999996 3334444 699886432 23456789999999999 5799999999998763 43
Q ss_pred E-EEEee--CCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHH-HHHHhcCCCCeeecCCCCCCeEEcC----CCCeE
Q 004994 514 L-LVYDY--GGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARAL-QYLQEVCEPPIVHGNFKSSNILLDE----KLIVR 585 (720)
Q Consensus 514 ~-lv~e~--~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L-~~LH~~~~~~ivHrDlkp~NiLl~~----~~~~k 585 (720)
+ +|+|| +.+++|.+++... .++.. ..++.++..++ +|||+. +||||||||+|||++. ++.++
T Consensus 80 ~~~I~e~~G~~~~tL~~~l~~~-----~~~e~--~~~~~~~L~~l~~yLh~~---~IvhrDlKp~NILl~~~~~~~~~~~ 149 (210)
T PRK10345 80 YDVIADFDGKPSITLTEFAEQC-----RYEED--VAQLRQLLKKLKRYLLDN---RIVTMELKPQNILCQRISESEVIPV 149 (210)
T ss_pred EEEEecCCCCcchhHHHHHHcc-----cccHh--HHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEeccCCCCCcEE
Confidence 4 78999 5589999999532 24443 35567777777 999987 8999999999999974 34799
Q ss_pred EccccCC
Q 004994 586 VSDCGLA 592 (720)
Q Consensus 586 l~DFGla 592 (720)
|+||+-+
T Consensus 150 LiDg~G~ 156 (210)
T PRK10345 150 VCDNIGE 156 (210)
T ss_pred EEECCCC
Confidence 9995433
No 424
>PLN03150 hypothetical protein; Provisional
Probab=99.74 E-value=6.4e-18 Score=192.84 Aligned_cols=152 Identities=33% Similarity=0.546 Sum_probs=106.0
Q ss_pred CCCCCHHHHHHHHHHHHhcCCCCCCCccCCCCCCCC---CCCceeEeecC------ceeEEEecCCcccccCCcCcCCCC
Q 004994 25 AGVTDPRDVMALNSLYISLNFPPLEKWLSFGGDPCG---DSWQGVFCVFS------NVTEIRLTGMNLGGVLADTLGDLE 95 (720)
Q Consensus 25 ~~~~~~~~~~al~~~~~~l~~~~~~~w~~~~~~~c~---~~w~gv~c~~~------~l~~l~L~~n~l~~~~~~~~~~l~ 95 (720)
...+.++|+.||+++|++++++...+|. +|||. +.|.|+.|... .++.|+|++|+|.|.+|..++.|+
T Consensus 366 ~~~t~~~~~~aL~~~k~~~~~~~~~~W~---g~~C~p~~~~w~Gv~C~~~~~~~~~~v~~L~L~~n~L~g~ip~~i~~L~ 442 (623)
T PLN03150 366 ESKTLLEEVSALQTLKSSLGLPLRFGWN---GDPCVPQQHPWSGADCQFDSTKGKWFIDGLGLDNQGLRGFIPNDISKLR 442 (623)
T ss_pred ccccCchHHHHHHHHHHhcCCcccCCCC---CCCCCCcccccccceeeccCCCCceEEEEEECCCCCccccCCHHHhCCC
Confidence 4577889999999999999876545783 57885 36999999642 367777777777777777777777
Q ss_pred CccEEeccCCcccccCCCCccccCcEEEecCCcCCCCCcchhhcccccccccccccccCCCCCchhcCCCCCceEeccCC
Q 004994 96 SVINIDLSNNHIGGSIPSNLPVTVRNFSLSGNQLTGSIPESLSRLTQLLDLSLNNNHLNGGIPDAFHQFTGLINFDLSAN 175 (720)
Q Consensus 96 ~L~~L~L~~N~l~g~ip~~~~~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N 175 (720)
+|+.|+|++|+|.| .+|..++++++|+.|+|++|+|+|.+|+.+++|++|+.|+|++|
T Consensus 443 ~L~~L~Ls~N~l~g----------------------~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~N 500 (623)
T PLN03150 443 HLQSINLSGNSIRG----------------------NIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGN 500 (623)
T ss_pred CCCEEECCCCcccC----------------------cCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcCC
Confidence 77777766666665 55555666666666666666666666666666666666666666
Q ss_pred cccccCCCCCCCC-CCCceeecccccc
Q 004994 176 NLTGQLPPSTRNL-SSLYSLHLQNNKL 201 (720)
Q Consensus 176 ~l~g~~p~~~~~l-~~L~~L~l~~N~l 201 (720)
+|+|.+|..++.+ .++..+++++|..
T Consensus 501 ~l~g~iP~~l~~~~~~~~~l~~~~N~~ 527 (623)
T PLN03150 501 SLSGRVPAALGGRLLHRASFNFTDNAG 527 (623)
T ss_pred cccccCChHHhhccccCceEEecCCcc
Confidence 6666666665543 3555667777654
No 425
>smart00090 RIO RIO-like kinase.
Probab=99.71 E-value=4.8e-17 Score=163.20 Aligned_cols=144 Identities=19% Similarity=0.139 Sum_probs=110.5
Q ss_pred cCCCCCCeeccCCCceEEEEE--eCCCcEEEEEEecccccccc----------------------cHHHHHHHHHHHHcc
Q 004994 440 NSFSEGNFIGEGLLGSVYKAE--LPGGKLLAVKKLSNTVSQRQ----------------------TDEEFLELASTISRL 495 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~--~~~g~~vavK~l~~~~~~~~----------------------~~~~~~~e~~~l~~l 495 (720)
..|...+.||+|++|.||+|. ..+|+.||||+++....... ....+..|++.+.++
T Consensus 28 ~~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L 107 (237)
T smart00090 28 ILSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRL 107 (237)
T ss_pred chHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 357788999999999999997 56899999999874321100 112356899999999
Q ss_pred CCC--ceeEEEeEeccCCeEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCC-eeecCCC
Q 004994 496 RHG--NIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPP-IVHGNFK 572 (720)
Q Consensus 496 ~H~--niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~-ivHrDlk 572 (720)
.+. .+.+++++ ...++||||+++.+|...... ...+.......++.++++++++||.. + |+|||||
T Consensus 108 ~~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~----~~~~~~~~~~~i~~qi~~~l~~LH~~---g~iiH~Dik 176 (237)
T smart00090 108 YEAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLK----DVEPEEEEEFELYDDILEEMRKLYKE---GELVHGDLS 176 (237)
T ss_pred HhcCCCCCeeeEe----cCceEEEEEecCCcccccccc----cCCcchHHHHHHHHHHHHHHHHHHhc---CCEEeCCCC
Confidence 753 34455553 235899999999888765421 12344556678999999999999987 8 9999999
Q ss_pred CCCeEEcCCCCeEEccccCCCCC
Q 004994 573 SSNILLDEKLIVRVSDCGLAPLL 595 (720)
Q Consensus 573 p~NiLl~~~~~~kl~DFGla~~~ 595 (720)
|+||+++ ++.++|+|||.|...
T Consensus 177 p~NIli~-~~~i~LiDFg~a~~~ 198 (237)
T smart00090 177 EYNILVH-DGKVVIIDVSQSVEL 198 (237)
T ss_pred hhhEEEE-CCCEEEEEChhhhcc
Confidence 9999999 889999999998754
No 426
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=99.71 E-value=2e-18 Score=180.88 Aligned_cols=186 Identities=24% Similarity=0.296 Sum_probs=162.4
Q ss_pred CceeEeecCceeEEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCCCcc--ccCcEEEecCCcCCCCCcchhhcc
Q 004994 63 WQGVFCVFSNVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSNLP--VTVRNFSLSGNQLTGSIPESLSRL 140 (720)
Q Consensus 63 w~gv~c~~~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~--~~L~~L~Ls~N~l~g~~p~~l~~l 140 (720)
-.|+|-.+.+++.|+|+.|+++..-..++.+|+.|+.||||+|.|...-++.+. .+|++|+|++|+|+...+..|..|
T Consensus 261 ~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L 340 (873)
T KOG4194|consen 261 DDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVL 340 (873)
T ss_pred cCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHH
Confidence 569999999999999999999988889999999999999999999977787775 899999999999998888889999
Q ss_pred cccccccccccccCCCCCchhcCCCCCceEeccCCcccccCCC---CCCCCCCCceeecccccccccc-ccccccc-cce
Q 004994 141 TQLLDLSLNNNHLNGGIPDAFHQFTGLINFDLSANNLTGQLPP---STRNLSSLYSLHLQNNKLSGTL-NVLEDLH-LID 215 (720)
Q Consensus 141 ~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~---~~~~l~~L~~L~l~~N~l~~~~-~~~~~~~-l~~ 215 (720)
.+|+.|+|++|+++...-.+|..+++|+.|||++|.|++.|-+ .|..|++|+.|+|.+|+|..++ .++..+. |++
T Consensus 341 ~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~ 420 (873)
T KOG4194|consen 341 SQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLEALEH 420 (873)
T ss_pred HHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhheeecCceeeecchhhhccCcccce
Confidence 9999999999999976677899999999999999999988765 4778999999999999999888 4566666 999
Q ss_pred EEccCCcCcccCCcccCCC--ccccccCccCCCcc
Q 004994 216 LNIENNLFSGPIPEKLLSI--PNFRKDGNPFNTTV 248 (720)
Q Consensus 216 l~l~~N~l~g~~p~~~~~l--~~l~~~~n~~~~~~ 248 (720)
|||.+|.|...-|..|..+ +.|-+..-++-|+|
T Consensus 421 LdL~~NaiaSIq~nAFe~m~Lk~Lv~nSssflCDC 455 (873)
T KOG4194|consen 421 LDLGDNAIASIQPNAFEPMELKELVMNSSSFLCDC 455 (873)
T ss_pred ecCCCCcceeecccccccchhhhhhhcccceEEec
Confidence 9999999998888888766 33334444455554
No 427
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.70 E-value=9.3e-17 Score=157.59 Aligned_cols=145 Identities=20% Similarity=0.149 Sum_probs=111.1
Q ss_pred HHHHHhcCCCCCCeeccCCCceEEEEEeCCCcEEEEEEeccccccc--------------------ccHHHHHHHHHHHH
Q 004994 434 SLQQYTNSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQR--------------------QTDEEFLELASTIS 493 (720)
Q Consensus 434 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~--------------------~~~~~~~~e~~~l~ 493 (720)
++......|...+.||+|+||.||++...+|+.||||++....... .....+..|+.++.
T Consensus 9 ~~~~~~~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 88 (198)
T cd05144 9 TLVKRGVVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALK 88 (198)
T ss_pred HHHHcCchhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHH
Confidence 3444444477789999999999999988889999999876432100 01123677888899
Q ss_pred ccCCC--ceeEEEeEeccCCeEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCC
Q 004994 494 RLRHG--NIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNF 571 (720)
Q Consensus 494 ~l~H~--niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDl 571 (720)
.+.|+ .++..++. ...++||||+++++|.++... ....+++.++++++.++|+. +|+||||
T Consensus 89 ~l~~~~i~v~~~~~~----~~~~lv~e~~~g~~L~~~~~~----------~~~~~~~~~i~~~l~~lh~~---gi~H~Dl 151 (198)
T cd05144 89 ALYEEGFPVPKPIDW----NRHAVVMEYIDGVELYRVRVL----------EDPEEVLDEILEEIVKAYKH---GIIHGDL 151 (198)
T ss_pred HHHHcCCCCCceeec----CCceEEEEEeCCcchhhcccc----------ccHHHHHHHHHHHHHHHHHC---CCCcCCC
Confidence 88887 44555542 345899999999998765421 22456888999999999986 9999999
Q ss_pred CCCCeEEcCCCCeEEccccCCCCC
Q 004994 572 KSSNILLDEKLIVRVSDCGLAPLL 595 (720)
Q Consensus 572 kp~NiLl~~~~~~kl~DFGla~~~ 595 (720)
||+||+++++++++|+|||++..+
T Consensus 152 ~p~Nill~~~~~~~liDfg~~~~~ 175 (198)
T cd05144 152 SEFNILVDDDEKIYIIDWPQMVST 175 (198)
T ss_pred CcccEEEcCCCcEEEEECCccccC
Confidence 999999999999999999999655
No 428
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.70 E-value=3.8e-17 Score=186.93 Aligned_cols=196 Identities=23% Similarity=0.280 Sum_probs=151.2
Q ss_pred HHhcCCCCCCeeccCCCceEEEEEeCCCcEEEEEEecccccccccHHHHHHHHHHHHccC---CCceeEEEeEeccCCeE
Q 004994 437 QYTNSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLR---HGNIVELIGYCNEHGQH 513 (720)
Q Consensus 437 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~---H~niv~l~~~~~~~~~~ 513 (720)
.-...|.+.+.||+|+||+||+|...+|+.||+|+=++...- +|.--.+++.+|+ -+-|..+...+.-.+.-
T Consensus 695 ~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~W-----EfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S 769 (974)
T KOG1166|consen 695 VGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPW-----EFYICLQVMERLKPQMLPSIMHISSAHVFQNAS 769 (974)
T ss_pred ecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCce-----eeeehHHHHHhhchhhhcchHHHHHHHccCCcc
Confidence 344667888899999999999998878999999987654321 1222234445555 12334444444455677
Q ss_pred EEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEc-------CCCCeEE
Q 004994 514 LLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLD-------EKLIVRV 586 (720)
Q Consensus 514 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~-------~~~~~kl 586 (720)
++|+||.+.|+|.+++. ..+.++|.....++.++++.+..||.. +|||+||||+|+||. +...++|
T Consensus 770 ~lv~ey~~~Gtlld~~N----~~~~m~e~lv~~~~~qml~ive~lH~~---~IIHgDiKPDNfll~~~~~~~~~~~~l~l 842 (974)
T KOG1166|consen 770 VLVSEYSPYGTLLDLIN----TNKVMDEYLVMFFSCQMLRIVEHLHAM---GIIHGDIKPDNFLLRREICADSDSKGLYL 842 (974)
T ss_pred eeeeeccccccHHHhhc----cCCCCCchhhhHHHHHHHHHHHHHHhc---ceecccCCcceeEeecccCCCCcccceEE
Confidence 89999999999999996 456789999999999999999999998 999999999999993 2346899
Q ss_pred ccccCCCCCCCCCCcccccCccccccCCCCccCCC-CCCCccchHhHHHHHHHHHhCCC
Q 004994 587 SDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFESG-SYSCQSDVYSLGVVMLELLTGRK 644 (720)
Q Consensus 587 ~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~~Dv~S~Gvvl~elltG~~ 644 (720)
+|||.+..+..-..........+|-++-.+|+..| ..+..+|.|.|+-+++-|+.|+.
T Consensus 843 IDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y 901 (974)
T KOG1166|consen 843 IDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKY 901 (974)
T ss_pred EecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHH
Confidence 99999987644333333344566777888999855 68999999999999999999974
No 429
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.70 E-value=1.2e-16 Score=158.56 Aligned_cols=136 Identities=21% Similarity=0.292 Sum_probs=112.2
Q ss_pred CeeccCCCceEEEEEeCCCcEEEEEEeccccccc------ccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEee
Q 004994 446 NFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQR------QTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDY 519 (720)
Q Consensus 446 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~------~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 519 (720)
+.||+|++|.||+|.. +|..+++|+........ .....+..|++++..++|++|+....++.+.+..++||||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence 5799999999999977 67789999865332111 1224678899999999999988777777677788999999
Q ss_pred CCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCC
Q 004994 520 GGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPL 594 (720)
Q Consensus 520 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~ 594 (720)
+++++|.+++... .+ .+..++.+++.+|.++|.. +++|||++|.|||++ ++.++|+|||.++.
T Consensus 81 ~~G~~L~~~~~~~-------~~-~~~~i~~~i~~~l~~lH~~---~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 81 IEGEPLKDLINSN-------GM-EELELSREIGRLVGKLHSA---GIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred eCCcCHHHHHHhc-------cH-HHHHHHHHHHHHHHHHHhC---CcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 9999999988432 12 6788999999999999987 999999999999999 78999999998864
No 430
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.68 E-value=2.1e-16 Score=155.34 Aligned_cols=132 Identities=21% Similarity=0.307 Sum_probs=105.3
Q ss_pred eeccCCCceEEEEEeCCCcEEEEEEecccccc------cccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEeeC
Q 004994 447 FIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQ------RQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDYG 520 (720)
Q Consensus 447 ~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~------~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 520 (720)
.||+|+||.||+|.+ +|..|++|+....... ......+.+|+++++.++|+++.....++...+..++||||+
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~ 79 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI 79 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence 489999999999985 5678999986532211 112356788999999999887655554555556678999999
Q ss_pred CCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCC
Q 004994 521 GNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPL 594 (720)
Q Consensus 521 ~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~ 594 (720)
++++|.+++..... .++.+++++|.++|.. +++|+|++|.||+++ ++.+++.|||+++.
T Consensus 80 ~g~~l~~~~~~~~~-----------~~~~~i~~~l~~lH~~---gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 80 EGKPLKDVIEEGND-----------ELLREIGRLVGKLHKA---GIVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred CCccHHHHHhhcHH-----------HHHHHHHHHHHHHHHC---CeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 99999988743210 6888999999999987 999999999999999 88999999999865
No 431
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.68 E-value=1.9e-16 Score=178.87 Aligned_cols=139 Identities=21% Similarity=0.287 Sum_probs=111.4
Q ss_pred cCCCCCCeeccCCCceEEEEEeCCCcEEEEEE-ecccccc-----cccHHHHHHHHHHHHccCCCceeEEEeEeccCCeE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAELPGGKLLAVKK-LSNTVSQ-----RQTDEEFLELASTISRLRHGNIVELIGYCNEHGQH 513 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~-l~~~~~~-----~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~ 513 (720)
..|...+.||+|+||+||+|.+.+.. +++|+ +.+.... ....+.+.+|+++++.++|++++..+.++.+....
T Consensus 333 ~~~~~~~~iG~G~~g~Vy~~~~~~~~-~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~ 411 (535)
T PRK09605 333 RRKIPDHLIGKGAEADIKKGEYLGRD-AVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEK 411 (535)
T ss_pred cccCccceeccCCcEEEEEEeecCcc-ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCC
Confidence 34556789999999999999775544 44443 3221111 12235688999999999999999888887777778
Q ss_pred EEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCC
Q 004994 514 LLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAP 593 (720)
Q Consensus 514 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~ 593 (720)
++||||+++++|.+++. ....++.+++++|.|||+. +++||||||+|||+ +++.++|+|||+++
T Consensus 412 ~lv~E~~~g~~L~~~l~------------~~~~~~~~i~~~L~~lH~~---giiHrDlkp~NILl-~~~~~~liDFGla~ 475 (535)
T PRK09605 412 TIVMEYIGGKDLKDVLE------------GNPELVRKVGEIVAKLHKA---GIVHGDLTTSNFIV-RDDRLYLIDFGLGK 475 (535)
T ss_pred EEEEEecCCCcHHHHHH------------HHHHHHHHHHHHHHHHHhC---CCccCCCChHHEEE-ECCcEEEEeCcccc
Confidence 99999999999998874 2457889999999999987 99999999999999 57799999999997
Q ss_pred CC
Q 004994 594 LL 595 (720)
Q Consensus 594 ~~ 595 (720)
..
T Consensus 476 ~~ 477 (535)
T PRK09605 476 YS 477 (535)
T ss_pred cC
Confidence 53
No 432
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.67 E-value=8e-18 Score=177.26 Aligned_cols=165 Identities=29% Similarity=0.439 Sum_probs=105.4
Q ss_pred cCceeEEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCCCcc---ccCcEEEecCCcCCCCCcchhhcccccccc
Q 004994 70 FSNVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSNLP---VTVRNFSLSGNQLTGSIPESLSRLTQLLDL 146 (720)
Q Consensus 70 ~~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~---~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L 146 (720)
+..|+.|||++|+|. ..|..+..-+++-+|+||+|+|. +||..+. ..|-.||||+|+|. .+|+.+.+|..|+.|
T Consensus 102 l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~Ie-tIPn~lfinLtDLLfLDLS~NrLe-~LPPQ~RRL~~LqtL 178 (1255)
T KOG0444|consen 102 LKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIE-TIPNSLFINLTDLLFLDLSNNRLE-MLPPQIRRLSMLQTL 178 (1255)
T ss_pred cccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccc-cCCchHHHhhHhHhhhccccchhh-hcCHHHHHHhhhhhh
Confidence 345666666666665 35566666666666666666666 6666555 33445666666666 666666666666666
Q ss_pred cccccccC-------------------------CCCCchhcCCCCCceEeccCCcccccCCCCCCCCCCCceeecccccc
Q 004994 147 SLNNNHLN-------------------------GGIPDAFHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNNKL 201 (720)
Q Consensus 147 ~l~~N~l~-------------------------g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l 201 (720)
.|++|.|. ..+|..+..|.+|..+|||.|+|. .+|+.+.++.+|+.|+||+|+|
T Consensus 179 ~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~i 257 (1255)
T KOG0444|consen 179 KLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP-IVPECLYKLRNLRRLNLSGNKI 257 (1255)
T ss_pred hcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCC-cchHHHhhhhhhheeccCcCce
Confidence 66666442 135555666666777777777776 6777777777777777777777
Q ss_pred ccccccccc-cccceEEccCCcCcccCCcccCCCccccc
Q 004994 202 SGTLNVLED-LHLIDLNIENNLFSGPIPEKLLSIPNFRK 239 (720)
Q Consensus 202 ~~~~~~~~~-~~l~~l~l~~N~l~g~~p~~~~~l~~l~~ 239 (720)
+..--..+. -.|+.||||.|+++ .+|+.+..|+.|+.
T Consensus 258 teL~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~k 295 (1255)
T KOG0444|consen 258 TELNMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTK 295 (1255)
T ss_pred eeeeccHHHHhhhhhhccccchhc-cchHHHhhhHHHHH
Confidence 654322222 23777888888888 78887777766553
No 433
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.66 E-value=9.7e-16 Score=154.30 Aligned_cols=194 Identities=19% Similarity=0.198 Sum_probs=130.2
Q ss_pred CCCceeEEEeEecc---------------------------CCeEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHH
Q 004994 496 RHGNIVELIGYCNE---------------------------HGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVA 548 (720)
Q Consensus 496 ~H~niv~l~~~~~~---------------------------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~ 548 (720)
+|||||++.++|.+ ....|+||.-.+. +|.+++.. ...+.....-|+
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~-----~~~s~r~~~~~l 347 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWT-----RHRSYRTGRVIL 347 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhc-----CCCchHHHHHHH
Confidence 69999999887622 2246888887664 88888853 234455666788
Q ss_pred HHHHHHHHHHHhcCCCCeeecCCCCCCeEE--cCCC--CeEEccccCCCCCCCCC----CcccccCccccccCCCCccCC
Q 004994 549 LGAARALQYLQEVCEPPIVHGNFKSSNILL--DEKL--IVRVSDCGLAPLLFSGS----TNELSEGLLTAHGSGAPEFES 620 (720)
Q Consensus 549 ~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl--~~~~--~~kl~DFGla~~~~~~~----~~~~~~~~~~~~~~~aPE~~~ 620 (720)
.|+.+|+.|||.. +|.|||+|++|||+ |+|. .+.|+|||++---.... +....-...|....||||+.+
T Consensus 348 aQlLEav~hL~~h---gvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~t 424 (598)
T KOG4158|consen 348 AQLLEAVTHLHKH---GVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIAT 424 (598)
T ss_pred HHHHHHHHHHHHc---cchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhh
Confidence 8999999999987 99999999999999 4444 57899999863221100 000111233556679999874
Q ss_pred CCC-------CCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcCCCCCchhhHHHHHHHHH
Q 004994 621 GSY-------SCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFAD 693 (720)
Q Consensus 621 ~~~-------~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 693 (720)
... -.|+|.|+.|-+.||+++...||-... +..+ +.....+---|. .++.++..+++
T Consensus 425 a~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rG---em~L---------~~r~Yqe~qLPa----lp~~vpp~~rq 488 (598)
T KOG4158|consen 425 AVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRG---EMLL---------DTRTYQESQLPA----LPSRVPPVARQ 488 (598)
T ss_pred cCCCCceeeccchhhhhhhhhhHHHHhccCCcccccc---hhee---------chhhhhhhhCCC----CcccCChHHHH
Confidence 321 348999999999999999999995421 1100 000111111112 22345567889
Q ss_pred HHHHHhccCCCCCCCHHHHHH
Q 004994 694 IISRCVQWEPGFRPPMSEIVQ 714 (720)
Q Consensus 694 l~~~cl~~dP~~RPt~~evl~ 714 (720)
++...|+.||++|++..-...
T Consensus 489 lV~~lL~r~pskRvsp~iAAN 509 (598)
T KOG4158|consen 489 LVFDLLKRDPSKRVSPNIAAN 509 (598)
T ss_pred HHHHHhcCCccccCCccHHHh
Confidence 999999999999998765433
No 434
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.65 E-value=6.1e-17 Score=181.30 Aligned_cols=207 Identities=21% Similarity=0.271 Sum_probs=138.9
Q ss_pred cCCCCCCeeccCCCceEEEEEeC-CCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEe
Q 004994 440 NSFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYD 518 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 518 (720)
.+|..++.|..|+||.||.++++ +.+.+|+|.=++.. ..+- ++.....|.+|
T Consensus 83 ~df~~IklisngAygavylvrh~~trqrfa~kiNkq~l--------ilRn--ilt~a~npfvv----------------- 135 (1205)
T KOG0606|consen 83 SDFNTIKLISNGAYGAVYLVRHKETRQRFAMKINKQNL--------ILRN--ILTFAGNPFVV----------------- 135 (1205)
T ss_pred cccceeEeeccCCCCceeeeeccccccchhhcccccch--------hhhc--cccccCCccee-----------------
Confidence 57888899999999999999765 46788884322211 0110 33333344443
Q ss_pred eCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCC
Q 004994 519 YGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSG 598 (720)
Q Consensus 519 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~ 598 (720)
|+-...+... ..++. +.+.+++|+|+. +|||||+||+|.+|+.-|++|+.|||+++.....
T Consensus 136 ----gDc~tllk~~----g~lPv--------dmvla~Eylh~y---givhrdlkpdnllIT~mGhiKlTDfgLsk~GLms 196 (1205)
T KOG0606|consen 136 ----GDCATLLKNI----GPLPV--------DMVLAVEYLHSY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMS 196 (1205)
T ss_pred ----chhhhhcccC----CCCcc--------hhhHHhHhhccC---CeecCCCCCCcceeeecccccccchhhhhhhhhh
Confidence 3434444321 12221 126789999987 9999999999999999999999999998653211
Q ss_pred ------------CCccc-ccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccc
Q 004994 599 ------------STNEL-SEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPR 664 (720)
Q Consensus 599 ------------~~~~~-~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~ 664 (720)
.++.+ .....+|+.|.|||++ ...|+..+|+|++|+|+||.+.|..||....+.+-...+
T Consensus 197 ~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~v------ 270 (1205)
T KOG0606|consen 197 LATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQV------ 270 (1205)
T ss_pred ccchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhh------
Confidence 11111 2345789999999998 456999999999999999999999999876543321111
Q ss_pred cCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCC
Q 004994 665 LHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRP 707 (720)
Q Consensus 665 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP 707 (720)
+.+... ..+ .+...+.+..+++.+.|+.+|.+|-
T Consensus 271 isd~i~--------wpE-~dea~p~Ea~dli~~LL~qnp~~Rl 304 (1205)
T KOG0606|consen 271 ISDDIE--------WPE-EDEALPPEAQDLIEQLLRQNPLCRL 304 (1205)
T ss_pred hhhhcc--------ccc-cCcCCCHHHHHHHHHHHHhChHhhc
Confidence 000000 000 0223346788999999999999994
No 435
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.65 E-value=4.3e-17 Score=171.13 Aligned_cols=175 Identities=21% Similarity=0.294 Sum_probs=129.3
Q ss_pred eEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccC
Q 004994 512 QHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGL 591 (720)
Q Consensus 512 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGl 591 (720)
..|+.|++|...+|.+|+.... .....+|...+.++.+++.|+.| . +.+|||+||.||++..+.++||.|||+
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~-~~e~~s~s~~~~~~~q~~~~~~y---k---~~ihrdlkp~nif~~~d~q~kIgDFgl 402 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRR-TGEERSLSLMLDIFKQIAPAVEY---K---GLIHRDLKPSNIFFSDDDQLKIGDFGL 402 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCC-cccccchhHHHHHHHhhccchhh---c---cchhhhccccccccccchhhhhhhhhh
Confidence 5789999999999999997543 34566788899999999999999 3 899999999999999999999999999
Q ss_pred CCCCCCCC----CcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhccccc
Q 004994 592 APLLFSGS----TNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRL 665 (720)
Q Consensus 592 a~~~~~~~----~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~ 665 (720)
........ ...-.....+|..||+||.+ +..|+.|+||||+|+||+|+++ =..+|..
T Consensus 403 ~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er----------------- 465 (516)
T KOG1033|consen 403 VTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFER----------------- 465 (516)
T ss_pred eeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHH-----------------
Confidence 87765443 11123346789999999999 4679999999999999999997 2223221
Q ss_pred CchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHH
Q 004994 666 HDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIV 713 (720)
Q Consensus 666 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl 713 (720)
...+..+.|..++..+..+.+. -..|+.++++..|.+||++.++-
T Consensus 466 --~~t~~d~r~g~ip~~~~~d~p~-e~~ll~~lls~~p~~RP~~~~~~ 510 (516)
T KOG1033|consen 466 --IATLTDIRDGIIPPEFLQDYPE-EYTLLQQLLSPSPEERPSAIEVA 510 (516)
T ss_pred --HHhhhhhhcCCCChHHhhcCcH-HHHHHHHhcCCCcccCchHHHHh
Confidence 0112222222222222222222 34889999999999999655543
No 436
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.63 E-value=3.1e-17 Score=172.87 Aligned_cols=172 Identities=29% Similarity=0.432 Sum_probs=120.7
Q ss_pred CceeEeecCceeEEEecCCcccc-cCCcCcCCCCCccEEeccCCcccccCCCCcc--ccCcEEEecCCcCCCCCcch-hh
Q 004994 63 WQGVFCVFSNVTEIRLTGMNLGG-VLADTLGDLESVINIDLSNNHIGGSIPSNLP--VTVRNFSLSGNQLTGSIPES-LS 138 (720)
Q Consensus 63 w~gv~c~~~~l~~l~L~~n~l~~-~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~--~~L~~L~Ls~N~l~g~~p~~-l~ 138 (720)
-.|-...+++|+.+.+..|+|.. -+|+.+..|..|+.||||.|+|. +.|.++- +++-.|+||+|+|. +||.. |.
T Consensus 70 vhGELs~Lp~LRsv~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~Ie-tIPn~lfi 147 (1255)
T KOG0444|consen 70 VHGELSDLPRLRSVIVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIE-TIPNSLFI 147 (1255)
T ss_pred hhhhhccchhhHHHhhhccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccc-cCCchHHH
Confidence 45666677889999999999963 37888999999999999999999 8998886 78999999999999 67755 67
Q ss_pred cccccccccccccccCCCCCchhcCCCCCceEeccCCcccccCCCCCCCCCCCceeeccccc--cccccccccccc-cce
Q 004994 139 RLTQLLDLSLNNNHLNGGIPDAFHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNNK--LSGTLNVLEDLH-LID 215 (720)
Q Consensus 139 ~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~--l~~~~~~~~~~~-l~~ 215 (720)
+|+.|-+||||+|+|. .+|+.+..|..|+.|+|++|.|.-.--..+-.+++|+.|++++.+ +...++.+..+. |.+
T Consensus 148 nLtDLLfLDLS~NrLe-~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~d 226 (1255)
T KOG0444|consen 148 NLTDLLFLDLSNNRLE-MLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRD 226 (1255)
T ss_pred hhHhHhhhccccchhh-hcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhh
Confidence 8999999999999998 788889999999999999997652111122233344444444432 222333333333 444
Q ss_pred EEccCCcCcccCCcccCCCcccc
Q 004994 216 LNIENNLFSGPIPEKLLSIPNFR 238 (720)
Q Consensus 216 l~l~~N~l~g~~p~~~~~l~~l~ 238 (720)
+|||.|++. .+|+.+..+.+|+
T Consensus 227 vDlS~N~Lp-~vPecly~l~~Lr 248 (1255)
T KOG0444|consen 227 VDLSENNLP-IVPECLYKLRNLR 248 (1255)
T ss_pred ccccccCCC-cchHHHhhhhhhh
Confidence 444444444 4444444444433
No 437
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.62 E-value=3.7e-15 Score=139.01 Aligned_cols=134 Identities=18% Similarity=0.193 Sum_probs=113.9
Q ss_pred CCeeccCCCceEEEEEeCCCcEEEEEEecccccccccHHHHHHHHHHHHccCC--CceeEEEeEeccCCeEEEEEeeCCC
Q 004994 445 GNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRH--GNIVELIGYCNEHGQHLLVYDYGGN 522 (720)
Q Consensus 445 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H--~niv~l~~~~~~~~~~~lv~e~~~~ 522 (720)
.+.||+|.++.||++...+ ..+++|....... ...+..|+..++.++| .+++++++++...+..+++|||+.+
T Consensus 3 ~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~----~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g 77 (155)
T cd05120 3 IKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK----GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEG 77 (155)
T ss_pred ceecccccccceEEEEecC-CeEEEEecCCCCc----hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCC
Confidence 4679999999999998755 7899999865432 4578899999999977 5999999999888899999999998
Q ss_pred CCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCC
Q 004994 523 CTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPL 594 (720)
Q Consensus 523 gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~ 594 (720)
+.+..+ ++.....++.+++++++++|..+..+++|+|++|+||++++++.+++.|||.++.
T Consensus 78 ~~~~~~-----------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 78 ETLDEV-----------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred eecccC-----------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 766543 4456677889999999999997666899999999999999989999999998864
No 438
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.62 E-value=2.3e-17 Score=147.72 Aligned_cols=154 Identities=27% Similarity=0.382 Sum_probs=138.1
Q ss_pred CcCCCCCccEEeccCCcccccCCCCcc--ccCcEEEecCCcCCCCCcchhhcccccccccccccccCCCCCchhcCCCCC
Q 004994 90 TLGDLESVINIDLSNNHIGGSIPSNLP--VTVRNFSLSGNQLTGSIPESLSRLTQLLDLSLNNNHLNGGIPDAFHQFTGL 167 (720)
Q Consensus 90 ~~~~l~~L~~L~L~~N~l~g~ip~~~~--~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L 167 (720)
.+.++.+++.|.||+|+++ .+|+.+. .+|+.|++++|+++ .+|.+++.++.|+.|+++-|++. .+|..|+.++.|
T Consensus 28 gLf~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~l 104 (264)
T KOG0617|consen 28 GLFNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPAL 104 (264)
T ss_pred cccchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchh
Confidence 3557889999999999999 8999987 79999999999999 89999999999999999999998 899999999999
Q ss_pred ceEeccCCcccc-cCCCCCCCCCCCceeeccccccccccccccccc-cceEEccCCcCcccCCcccCCCccccccCccCC
Q 004994 168 INFDLSANNLTG-QLPPSTRNLSSLYSLHLQNNKLSGTLNVLEDLH-LIDLNIENNLFSGPIPEKLLSIPNFRKDGNPFN 245 (720)
Q Consensus 168 ~~L~ls~N~l~g-~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~-l~~l~l~~N~l~g~~p~~~~~l~~l~~~~n~~~ 245 (720)
+.|||++|+++. .+|..|..+..|+.|+|+.|.|.-.++.++.+. |+.|.+..|.+- .+|.+++.++.|+......|
T Consensus 105 evldltynnl~e~~lpgnff~m~tlralyl~dndfe~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqgn 183 (264)
T KOG0617|consen 105 EVLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFEILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQGN 183 (264)
T ss_pred hhhhccccccccccCCcchhHHHHHHHHHhcCCCcccCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhcccc
Confidence 999999999975 589999999999999999999998888888876 999999999998 89999988887765544444
Q ss_pred Cc
Q 004994 246 TT 247 (720)
Q Consensus 246 ~~ 247 (720)
-.
T Consensus 184 rl 185 (264)
T KOG0617|consen 184 RL 185 (264)
T ss_pred ee
Confidence 33
No 439
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.61 E-value=3e-15 Score=145.53 Aligned_cols=137 Identities=22% Similarity=0.224 Sum_probs=97.3
Q ss_pred CCeeccCCCceEEEEEeCCCcEEEEEEecccccccccHHH----------------------HHHHHHHHHccCCCc--e
Q 004994 445 GNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEE----------------------FLELASTISRLRHGN--I 500 (720)
Q Consensus 445 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~----------------------~~~e~~~l~~l~H~n--i 500 (720)
.+.||+|+||+||+|...+|+.||||++............ ...|.+.+.++.+.. +
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 4679999999999998778999999998754221111111 134556666664433 4
Q ss_pred eEEEeEeccCCeEEEEEeeCCCCCHHHH-hhccchhccccCHHHHHHHHHHHHHHHHHHHh-cCCCCeeecCCCCCCeEE
Q 004994 501 VELIGYCNEHGQHLLVYDYGGNCTLHDL-LHSDEEAHKKFSWNIRIRVALGAARALQYLQE-VCEPPIVHGNFKSSNILL 578 (720)
Q Consensus 501 v~l~~~~~~~~~~~lv~e~~~~gsL~~~-l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~-~~~~~ivHrDlkp~NiLl 578 (720)
.+.+++ ...++||||++++.+... +.... .. .....++.+++.++.++|. . +|+||||||+||++
T Consensus 82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~-----~~-~~~~~~~~~~~~~l~~lh~~~---~ivH~Dl~p~Nili 148 (187)
T cd05119 82 PKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR-----LL-EDPEELYDQILELMRKLYREA---GLVHGDLSEYNILV 148 (187)
T ss_pred CceEec----CCCEEEEEEeCCCCccChhhhhhh-----hc-ccHHHHHHHHHHHHHHHhhcc---CcCcCCCChhhEEE
Confidence 445543 245899999998543211 11100 00 4466789999999999998 5 89999999999999
Q ss_pred cCCCCeEEccccCCCCC
Q 004994 579 DEKLIVRVSDCGLAPLL 595 (720)
Q Consensus 579 ~~~~~~kl~DFGla~~~ 595 (720)
+ ++.++++|||.+...
T Consensus 149 ~-~~~~~liDfg~a~~~ 164 (187)
T cd05119 149 D-DGKVYIIDVPQAVEI 164 (187)
T ss_pred E-CCcEEEEECcccccc
Confidence 9 899999999999655
No 440
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=99.56 E-value=2.8e-16 Score=164.97 Aligned_cols=137 Identities=26% Similarity=0.251 Sum_probs=78.4
Q ss_pred eeEeecCceeEEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCCCcc---ccCcEEEecCCcCCCCCcchhhccc
Q 004994 65 GVFCVFSNVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSNLP---VTVRNFSLSGNQLTGSIPESLSRLT 141 (720)
Q Consensus 65 gv~c~~~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~---~~L~~L~Ls~N~l~g~~p~~l~~l~ 141 (720)
-+|-.+++|+.|+|..|.|.-.---.|..|++|+.|.|..|+++ .+-+... .+++.|+|+.|+++..--.++.+|+
T Consensus 215 r~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I~-kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt 293 (873)
T KOG4194|consen 215 RSFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDIS-KLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLT 293 (873)
T ss_pred HHhhhcchhhhhhccccceeeehhhhhcCchhhhhhhhhhcCcc-cccCcceeeecccceeecccchhhhhhcccccccc
Confidence 45555677777777777776333345666666666666666666 3333222 4556666666666544445555566
Q ss_pred ccccccccccccCCCCCchhcCCCCCceEeccCCcccccCCCCCCCCCCCceeeccccccc
Q 004994 142 QLLDLSLNNNHLNGGIPDAFHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNNKLS 202 (720)
Q Consensus 142 ~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~ 202 (720)
.|+.|+||+|.|....++.+.-+++|++|+|++|+|+..-+.+|..|.+|+.|+|++|.++
T Consensus 294 ~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~ 354 (873)
T KOG4194|consen 294 SLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSID 354 (873)
T ss_pred hhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhcccccchH
Confidence 6666666666665555555555566666666666665333344444555555555555444
No 441
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.56 E-value=9.3e-16 Score=154.49 Aligned_cols=195 Identities=25% Similarity=0.305 Sum_probs=131.9
Q ss_pred CCCCCCCC---ceeEeecC-----------ceeEEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCCCcc--ccC
Q 004994 56 GDPCGDSW---QGVFCVFS-----------NVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSNLP--VTV 119 (720)
Q Consensus 56 ~~~c~~~w---~gv~c~~~-----------~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~--~~L 119 (720)
.-||.|+= .-|+|... ..++|+|..|+|+.+.|.+|+.+++|+.||||+|+|+..-|..|. .+|
T Consensus 38 P~pC~Cs~~~g~~VdCr~~GL~eVP~~LP~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l 117 (498)
T KOG4237|consen 38 PAPCTCSDVEGGIVDCRGKGLTEVPANLPPETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASL 117 (498)
T ss_pred CCCcccCCCCCceEEccCCCcccCcccCCCcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhh
Confidence 35676554 55778643 456889999999988889999999999999999999977777764 343
Q ss_pred c-EEEecCCcCCCCCcchhhcccccccccccccccCCCCCc---------------------------------------
Q 004994 120 R-NFSLSGNQLTGSIPESLSRLTQLLDLSLNNNHLNGGIPD--------------------------------------- 159 (720)
Q Consensus 120 ~-~L~Ls~N~l~g~~p~~l~~l~~L~~L~l~~N~l~g~~p~--------------------------------------- 159 (720)
. -+++++|+|+...-..|++|..|+.|.+.-|++.-...+
T Consensus 118 ~~Lvlyg~NkI~~l~k~~F~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~ 197 (498)
T KOG4237|consen 118 LSLVLYGNNKITDLPKGAFGGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQ 197 (498)
T ss_pred hHHHhhcCCchhhhhhhHhhhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhc
Confidence 3 344455777743334466655555544444433211111
Q ss_pred -----------------------------------------------------------------------hhcCCCCCc
Q 004994 160 -----------------------------------------------------------------------AFHQFTGLI 168 (720)
Q Consensus 160 -----------------------------------------------------------------------~~~~l~~L~ 168 (720)
.|..|++|+
T Consensus 198 np~icdCnL~wla~~~a~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~ 277 (498)
T KOG4237|consen 198 NPFICDCNLPWLADDLAMNPIETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLR 277 (498)
T ss_pred CccccccccchhhhHHhhchhhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccce
Confidence 245666677
Q ss_pred eEeccCCcccccCCCCCCCCCCCceeecccccccccc-ccccccc-cceEEccCCcCcccCCcccC---CCccccccCcc
Q 004994 169 NFDLSANNLTGQLPPSTRNLSSLYSLHLQNNKLSGTL-NVLEDLH-LIDLNIENNLFSGPIPEKLL---SIPNFRKDGNP 243 (720)
Q Consensus 169 ~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~-~~~~~~~-l~~l~l~~N~l~g~~p~~~~---~l~~l~~~~n~ 243 (720)
.|+|++|+|++.-+.+|..+..|+.|+|..|+|...- ..+..++ |+.|+|.+|+|+-.-|..|. ++..|.+..||
T Consensus 278 ~lnlsnN~i~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np 357 (498)
T KOG4237|consen 278 KLNLSNNKITRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNP 357 (498)
T ss_pred EeccCCCccchhhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCc
Confidence 7777777777666667777777777777777765443 2344554 88899999999987787664 45667788999
Q ss_pred CCCcccC
Q 004994 244 FNTTVIA 250 (720)
Q Consensus 244 ~~~~~~~ 250 (720)
|||.|..
T Consensus 358 ~~CnC~l 364 (498)
T KOG4237|consen 358 FNCNCRL 364 (498)
T ss_pred ccCccch
Confidence 9987643
No 442
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.55 E-value=5.7e-14 Score=141.25 Aligned_cols=138 Identities=14% Similarity=0.144 Sum_probs=104.9
Q ss_pred CCeec-cCCCceEEEEEeCCCcEEEEEEecccc------c-----ccccHHHHHHHHHHHHccCCCce--eEEEeEeccC
Q 004994 445 GNFIG-EGLLGSVYKAELPGGKLLAVKKLSNTV------S-----QRQTDEEFLELASTISRLRHGNI--VELIGYCNEH 510 (720)
Q Consensus 445 ~~~lg-~G~~g~Vy~~~~~~g~~vavK~l~~~~------~-----~~~~~~~~~~e~~~l~~l~H~ni--v~l~~~~~~~ 510 (720)
...|| .|+.|+||++... +..++||++.... . .......+.+|++++.+++|++| +..+++....
T Consensus 36 ~~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred CceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 46788 8999999999775 6688999885321 0 01233567889999999998875 6777765432
Q ss_pred -C---eEEEEEeeCCC-CCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeE
Q 004994 511 -G---QHLLVYDYGGN-CTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVR 585 (720)
Q Consensus 511 -~---~~~lv~e~~~~-gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~k 585 (720)
. ..++||||+++ .+|.+++... .++.. .+.+++++|.+||+. ||+||||||.|||++.++.++
T Consensus 115 ~~~~~~~~lV~e~l~G~~~L~~~l~~~-----~l~~~----~~~~i~~~l~~lH~~---GI~HrDlkp~NILv~~~~~v~ 182 (239)
T PRK01723 115 HGLFYRADILIERIEGARDLVALLQEA-----PLSEE----QWQAIGQLIARFHDA---GVYHADLNAHNILLDPDGKFW 182 (239)
T ss_pred cCcceeeeEEEEecCCCCCHHHHHhcC-----CCCHH----HHHHHHHHHHHHHHC---CCCCCCCCchhEEEcCCCCEE
Confidence 2 23599999997 6898887431 23332 356789999999997 999999999999999999999
Q ss_pred EccccCCCCC
Q 004994 586 VSDCGLAPLL 595 (720)
Q Consensus 586 l~DFGla~~~ 595 (720)
|+|||.+...
T Consensus 183 LIDfg~~~~~ 192 (239)
T PRK01723 183 LIDFDRGELR 192 (239)
T ss_pred EEECCCcccC
Confidence 9999998653
No 443
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.55 E-value=4.2e-14 Score=162.30 Aligned_cols=207 Identities=23% Similarity=0.336 Sum_probs=135.4
Q ss_pred cCCCCCHHHHHHHHHHHHhcCCC-CCCC----ccCCCCCCCCCC--------------CceeEeec--------------
Q 004994 24 CAGVTDPRDVMALNSLYISLNFP-PLEK----WLSFGGDPCGDS--------------WQGVFCVF-------------- 70 (720)
Q Consensus 24 ~~~~~~~~~~~al~~~~~~l~~~-~~~~----w~~~~~~~c~~~--------------w~gv~c~~-------------- 70 (720)
..+.+.+++...+.++.+.|.+| .+.+ |.. .+|.|.-. -.-|.|..
T Consensus 56 ~~~~~~~~~~~~~~~~~~~l~~p~~~~~~~~~~~~-~~~fc~~~~~~~~~l~~~~~~~~~tv~~~~~~vt~l~~~g~~~~ 134 (754)
T PRK15370 56 PPETASPEEIKSKFECLRMLAFPAYADNIQYSRGG-ADQYCILSENSQEILSIVFNTEGYTVEGGGKSVTYTRVTESEQA 134 (754)
T ss_pred CCCCCCHHHHHHHHHHHHHhcCCchhhccccccCC-CCcccccCCcchhhheeeecCCceEEecCCCccccccccccccc
Confidence 35788999999999999999998 4555 865 56788411 11255522
Q ss_pred -------------------------------------------CceeEEEecCCcccccCCcCcCCCCCccEEeccCCcc
Q 004994 71 -------------------------------------------SNVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHI 107 (720)
Q Consensus 71 -------------------------------------------~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l 107 (720)
.+.+.|+|++++|+. +|..+. ++|+.|+|++|+|
T Consensus 135 ~~~~~~~~~~~~~~~w~~w~~~~~~~~~~~r~~a~~r~~~Cl~~~~~~L~L~~~~Lts-LP~~Ip--~~L~~L~Ls~N~L 211 (754)
T PRK15370 135 SSASGSKDAVNYELIWSEWVKEAPAKEAANREEAVQRMRDCLKNNKTELRLKILGLTT-IPACIP--EQITTLILDNNEL 211 (754)
T ss_pred ccCCCCCChhhHHHHHHHHHhcCCCCccccHHHHHHHHHhhcccCceEEEeCCCCcCc-CCcccc--cCCcEEEecCCCC
Confidence 335667777777763 454443 4677778888877
Q ss_pred cccCCCCccccCcEEEecCCcCCCCCcchhhcccccccccccccccCCCCCchhcCCCCCceEeccCCcccccCCCCCCC
Q 004994 108 GGSIPSNLPVTVRNFSLSGNQLTGSIPESLSRLTQLLDLSLNNNHLNGGIPDAFHQFTGLINFDLSANNLTGQLPPSTRN 187 (720)
Q Consensus 108 ~g~ip~~~~~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~ 187 (720)
+ .+|..+..+|+.|+|++|+|+ .+|..+. .+|+.|+|++|++. .+|..+. ++|+.|+|++|+|+ .+|..+.
T Consensus 212 t-sLP~~l~~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l~- 282 (754)
T PRK15370 212 K-SLPENLQGNIKTLYANSNQLT-SIPATLP--DTIQEMELSINRIT-ELPERLP--SALQSLDLFHNKIS-CLPENLP- 282 (754)
T ss_pred C-cCChhhccCCCEEECCCCccc-cCChhhh--ccccEEECcCCccC-cCChhHh--CCCCEEECcCCccC-ccccccC-
Confidence 7 677776677777888777777 5666553 36777777777776 5666554 46777888888877 5676553
Q ss_pred CCCCceeeccccccccccccccccccceEEccCCcCcccCCcc-cCCCccccccCccCCC
Q 004994 188 LSSLYSLHLQNNKLSGTLNVLEDLHLIDLNIENNLFSGPIPEK-LLSIPNFRKDGNPFNT 246 (720)
Q Consensus 188 l~~L~~L~l~~N~l~~~~~~~~~~~l~~l~l~~N~l~g~~p~~-~~~l~~l~~~~n~~~~ 246 (720)
++|+.|+|++|+|++.+..+. ..|+.|++++|+|+. +|.. ..+|..|.+.+|.+.+
T Consensus 283 -~sL~~L~Ls~N~Lt~LP~~lp-~sL~~L~Ls~N~Lt~-LP~~l~~sL~~L~Ls~N~Lt~ 339 (754)
T PRK15370 283 -EELRYLSVYDNSIRTLPAHLP-SGITHLNVQSNSLTA-LPETLPPGLKTLEAGENALTS 339 (754)
T ss_pred -CCCcEEECCCCccccCcccch-hhHHHHHhcCCcccc-CCccccccceeccccCCcccc
Confidence 477778888887776543221 136666667776663 4432 2344555555555443
No 444
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.54 E-value=1.1e-15 Score=172.02 Aligned_cols=255 Identities=24% Similarity=0.292 Sum_probs=183.8
Q ss_pred CCCCCCeeccCCCceEEEEEe--CCCcEEEEEEecccccccccHHHHHHHHHHHHccC-CCceeEEEeEeccCCeEEEEE
Q 004994 441 SFSEGNFIGEGLLGSVYKAEL--PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLR-HGNIVELIGYCNEHGQHLLVY 517 (720)
Q Consensus 441 ~~~~~~~lg~G~~g~Vy~~~~--~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~~~~~~~~~~~lv~ 517 (720)
.|...+.||+|+|+.|-.... .....+|+|.+..........+....|..+-..+. |+|++.+++...+.+..++..
T Consensus 21 ~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~~ 100 (601)
T KOG0590|consen 21 QYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLSL 100 (601)
T ss_pred cccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCccccccc
Confidence 345556699999999987744 33556777777544322333344455666767776 999999999999999999999
Q ss_pred eeCCCCCHHHHh-hccchhccccCHHHHHHHHHHHHHHHHHHH-hcCCCCeeecCCCCCCeEEcCCC-CeEEccccCCCC
Q 004994 518 DYGGNCTLHDLL-HSDEEAHKKFSWNIRIRVALGAARALQYLQ-EVCEPPIVHGNFKSSNILLDEKL-IVRVSDCGLAPL 594 (720)
Q Consensus 518 e~~~~gsL~~~l-~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH-~~~~~~ivHrDlkp~NiLl~~~~-~~kl~DFGla~~ 594 (720)
+|..++++.+-+ +... ...+......+..++..++.|+| .. ++.|||+||+|.+++..+ ..|++|||+|..
T Consensus 101 ~~s~g~~~f~~i~~~~~---~~~~~~~~~~~~~ql~s~l~~~H~~~---~~~h~~ikP~n~~l~~s~~~l~~~df~~At~ 174 (601)
T KOG0590|consen 101 SYSDGGSLFSKISHPDS---TGTSSSSASRYLPQLNSGLSYLHPEN---GVTHRDIKPSNSLLDESGSALKIADFGLATA 174 (601)
T ss_pred CcccccccccccccCCc---cCCCCcchhhhhhhhccCccccCccc---ccccCCCCCccchhccCCCcccCCCchhhcc
Confidence 999999998877 3221 12334456678889999999999 55 899999999999999999 999999999987
Q ss_pred CCC-CCCcccccCccc-cccCCCCccCCC--CCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhh
Q 004994 595 LFS-GSTNELSEGLLT-AHGSGAPEFESG--SYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDA 670 (720)
Q Consensus 595 ~~~-~~~~~~~~~~~~-~~~~~aPE~~~~--~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~ 670 (720)
+.. .+.........| ++.|+|||...+ -.....|+||.|+++.-+++|..|++....... ....|....-.
T Consensus 175 ~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~-~~~~~~~~~~~---- 249 (601)
T KOG0590|consen 175 YRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDG-RYSSWKSNKGR---- 249 (601)
T ss_pred ccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccc-cceeecccccc----
Confidence 765 344444445566 899999999865 356789999999999999999999976543331 11112111000
Q ss_pred hhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 004994 671 LSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQ 714 (720)
Q Consensus 671 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 714 (720)
..............++..+++..+|+.|.+.+++-.
T Consensus 250 --------~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~ 285 (601)
T KOG0590|consen 250 --------FTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKL 285 (601)
T ss_pred --------cccCccccCChhhhhcccccccCCchhccccccccc
Confidence 000011122245568899999999999999887643
No 445
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.53 E-value=1.9e-16 Score=159.52 Aligned_cols=167 Identities=25% Similarity=0.413 Sum_probs=136.3
Q ss_pred CceeEEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCCCc-c-ccCcEEEecCCcCCCCCcchhhcccccccccc
Q 004994 71 SNVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSNL-P-VTVRNFSLSGNQLTGSIPESLSRLTQLLDLSL 148 (720)
Q Consensus 71 ~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~-~-~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~l 148 (720)
..+..++..+|+++ .+|+.++++.+|..|++.+|++. .+|+.. . +.|+.||...|-++ ++|++++.+.+|..|+|
T Consensus 137 ~~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~-~l~~~~i~m~~L~~ld~~~N~L~-tlP~~lg~l~~L~~LyL 213 (565)
T KOG0472|consen 137 LDLEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLK-ALPENHIAMKRLKHLDCNSNLLE-TLPPELGGLESLELLYL 213 (565)
T ss_pred hhhhhhhccccccc-cCchHHHHHHHHHHhhccccchh-hCCHHHHHHHHHHhcccchhhhh-cCChhhcchhhhHHHHh
Confidence 35677788888887 57788888888888888888888 455443 3 67899999999988 88989999999999999
Q ss_pred cccccCCCCCchhcCCCCCceEeccCCcccccCCCCCC-CCCCCceeeccccccccccccccccc-cceEEccCCcCccc
Q 004994 149 NNNHLNGGIPDAFHQFTGLINFDLSANNLTGQLPPSTR-NLSSLYSLHLQNNKLSGTLNVLEDLH-LIDLNIENNLFSGP 226 (720)
Q Consensus 149 ~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~-~l~~L~~L~l~~N~l~~~~~~~~~~~-l~~l~l~~N~l~g~ 226 (720)
..|+|. .+| +|.+|..|.+|+++.|+|+ .+|.+.. ++++|..|||..|+++..+..+..+. |..||+|+|.++ .
T Consensus 214 ~~Nki~-~lP-ef~gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRdNklke~Pde~clLrsL~rLDlSNN~is-~ 289 (565)
T KOG0472|consen 214 RRNKIR-FLP-EFPGCSLLKELHVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLKEVPDEICLLRSLERLDLSNNDIS-S 289 (565)
T ss_pred hhcccc-cCC-CCCccHHHHHHHhcccHHH-hhHHHHhcccccceeeeccccccccCchHHHHhhhhhhhcccCCccc-c
Confidence 999997 777 7899999999999999998 7887765 89999999999999999888777776 889999999999 6
Q ss_pred CCcccCCC--ccccccCccC
Q 004994 227 IPEKLLSI--PNFRKDGNPF 244 (720)
Q Consensus 227 ~p~~~~~l--~~l~~~~n~~ 244 (720)
+|.+++++ ..|.+.|||.
T Consensus 290 Lp~sLgnlhL~~L~leGNPl 309 (565)
T KOG0472|consen 290 LPYSLGNLHLKFLALEGNPL 309 (565)
T ss_pred CCcccccceeeehhhcCCch
Confidence 77778776 2233456654
No 446
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.46 E-value=1e-13 Score=159.04 Aligned_cols=160 Identities=25% Similarity=0.411 Sum_probs=126.5
Q ss_pred CceeEEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCCCccccCcEEEecCCcCCCCCcchhhcccccccccccc
Q 004994 71 SNVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSNLPVTVRNFSLSGNQLTGSIPESLSRLTQLLDLSLNN 150 (720)
Q Consensus 71 ~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~l~~ 150 (720)
.+++.|+|++|+|+. +|..+. ++|+.|+|++|+|+ .+|..++.+|+.|+|++|++. .+|..+. .+|+.|+|++
T Consensus 199 ~~L~~L~Ls~N~Lts-LP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~~~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~Ls~ 271 (754)
T PRK15370 199 EQITTLILDNNELKS-LPENLQ--GNIKTLYANSNQLT-SIPATLPDTIQEMELSINRIT-ELPERLP--SALQSLDLFH 271 (754)
T ss_pred cCCcEEEecCCCCCc-CChhhc--cCCCEEECCCCccc-cCChhhhccccEEECcCCccC-cCChhHh--CCCCEEECcC
Confidence 478999999999995 566554 58999999999999 789888889999999999999 7888775 5899999999
Q ss_pred cccCCCCCchhcCCCCCceEeccCCcccccCCCCCCCCCCCceeeccccccccccccccccccceEEccCCcCcccCCcc
Q 004994 151 NHLNGGIPDAFHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNNKLSGTLNVLEDLHLIDLNIENNLFSGPIPEK 230 (720)
Q Consensus 151 N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~l~l~~N~l~g~~p~~ 230 (720)
|+|+ .+|..+. .+|+.|+|++|+|+ .+|..+. ++|+.|+|++|+|+..+..+. ..|+.|++++|.|++ +|..
T Consensus 272 N~L~-~LP~~l~--~sL~~L~Ls~N~Lt-~LP~~lp--~sL~~L~Ls~N~Lt~LP~~l~-~sL~~L~Ls~N~Lt~-LP~~ 343 (754)
T PRK15370 272 NKIS-CLPENLP--EELRYLSVYDNSIR-TLPAHLP--SGITHLNVQSNSLTALPETLP-PGLKTLEAGENALTS-LPAS 343 (754)
T ss_pred CccC-ccccccC--CCCcEEECCCCccc-cCcccch--hhHHHHHhcCCccccCCcccc-ccceeccccCCcccc-CChh
Confidence 9998 5787664 58999999999998 5776553 478888999998887654322 357888888888884 6654
Q ss_pred cC-CCccccccCccCC
Q 004994 231 LL-SIPNFRKDGNPFN 245 (720)
Q Consensus 231 ~~-~l~~l~~~~n~~~ 245 (720)
+. +|..|.+.+|.+.
T Consensus 344 l~~sL~~L~Ls~N~L~ 359 (754)
T PRK15370 344 LPPELQVLDVSKNQIT 359 (754)
T ss_pred hcCcccEEECCCCCCC
Confidence 43 5566666666554
No 447
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.45 E-value=1.4e-15 Score=159.76 Aligned_cols=170 Identities=26% Similarity=0.393 Sum_probs=150.8
Q ss_pred ecCceeEEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCCCcc--ccCcEEEecCCcCCCCCcchhhcccccccc
Q 004994 69 VFSNVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSNLP--VTVRNFSLSGNQLTGSIPESLSRLTQLLDL 146 (720)
Q Consensus 69 ~~~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~--~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L 146 (720)
++...+..||+.|++. .+|..+..+..|..|.|..|.|. .||..+. ..|++|||+.|+++ .+|..++.|+ |+.|
T Consensus 73 ~ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvl 148 (722)
T KOG0532|consen 73 DLTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVL 148 (722)
T ss_pred cccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeE
Confidence 3455677899999998 68889999999999999999999 8888886 67899999999999 8899998876 9999
Q ss_pred cccccccCCCCCchhcCCCCCceEeccCCcccccCCCCCCCCCCCceeeccccccccccccccccccceEEccCCcCccc
Q 004994 147 SLNNNHLNGGIPDAFHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNNKLSGTLNVLEDLHLIDLNIENNLFSGP 226 (720)
Q Consensus 147 ~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~l~l~~N~l~g~ 226 (720)
.+++|+++ .+|+.++.+..|..||.+.|++. .+|..++++.+|+.|.+..|++.-.++.+..+.|..||+|+|+++ .
T Consensus 149 i~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~~lp~El~~LpLi~lDfScNkis-~ 225 (722)
T KOG0532|consen 149 IVSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLEDLPEELCSLPLIRLDFSCNKIS-Y 225 (722)
T ss_pred EEecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhhhCCHHHhCCceeeeecccCcee-e
Confidence 99999998 89999998899999999999998 899999999999999999999999998888999999999999999 8
Q ss_pred CCcccCCCcccc---ccCccCC
Q 004994 227 IPEKLLSIPNFR---KDGNPFN 245 (720)
Q Consensus 227 ~p~~~~~l~~l~---~~~n~~~ 245 (720)
||-.|.+|..|+ +.+||..
T Consensus 226 iPv~fr~m~~Lq~l~LenNPLq 247 (722)
T KOG0532|consen 226 LPVDFRKMRHLQVLQLENNPLQ 247 (722)
T ss_pred cchhhhhhhhheeeeeccCCCC
Confidence 999888777665 5667664
No 448
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.45 E-value=1.2e-15 Score=153.80 Aligned_cols=155 Identities=23% Similarity=0.390 Sum_probs=141.3
Q ss_pred ceeEeecCceeEEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCCCcc--ccCcEEEecCCcCCCCCcchhhccc
Q 004994 64 QGVFCVFSNVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSNLP--VTVRNFSLSGNQLTGSIPESLSRLT 141 (720)
Q Consensus 64 ~gv~c~~~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~--~~L~~L~Ls~N~l~g~~p~~l~~l~ 141 (720)
++.+-++.++..|++.+|++....|..+. ++.|+.||.-.|-+. .+|++++ .+|.-|||..|++. .+| +|..|.
T Consensus 153 p~~~~~~~~l~~l~~~~n~l~~l~~~~i~-m~~L~~ld~~~N~L~-tlP~~lg~l~~L~~LyL~~Nki~-~lP-ef~gcs 228 (565)
T KOG0472|consen 153 PEDMVNLSKLSKLDLEGNKLKALPENHIA-MKRLKHLDCNSNLLE-TLPPELGGLESLELLYLRRNKIR-FLP-EFPGCS 228 (565)
T ss_pred chHHHHHHHHHHhhccccchhhCCHHHHH-HHHHHhcccchhhhh-cCChhhcchhhhHHHHhhhcccc-cCC-CCCccH
Confidence 34444456788999999999976665555 999999999999998 9999998 78999999999999 888 899999
Q ss_pred ccccccccccccCCCCCchhc-CCCCCceEeccCCcccccCCCCCCCCCCCceeeccccccccccccccccccceEEccC
Q 004994 142 QLLDLSLNNNHLNGGIPDAFH-QFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNNKLSGTLNVLEDLHLIDLNIEN 220 (720)
Q Consensus 142 ~L~~L~l~~N~l~g~~p~~~~-~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~l~l~~ 220 (720)
.|.+|+++.|+|. .+|.+.+ +|.+|..|||.+|+++ .+|+.+.-+.+|..||||+|.+++.+..++++.|+.|-+.+
T Consensus 229 ~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRdNklk-e~Pde~clLrsL~rLDlSNN~is~Lp~sLgnlhL~~L~leG 306 (565)
T KOG0472|consen 229 LLKELHVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLK-EVPDEICLLRSLERLDLSNNDISSLPYSLGNLHLKFLALEG 306 (565)
T ss_pred HHHHHHhcccHHH-hhHHHHhcccccceeeeccccccc-cCchHHHHhhhhhhhcccCCccccCCcccccceeeehhhcC
Confidence 9999999999998 7888876 8999999999999999 99999999999999999999999999999999999999999
Q ss_pred CcCc
Q 004994 221 NLFS 224 (720)
Q Consensus 221 N~l~ 224 (720)
|.+.
T Consensus 307 NPlr 310 (565)
T KOG0472|consen 307 NPLR 310 (565)
T ss_pred CchH
Confidence 9987
No 449
>PLN03150 hypothetical protein; Provisional
Probab=99.45 E-value=9.6e-14 Score=158.67 Aligned_cols=104 Identities=32% Similarity=0.476 Sum_probs=66.3
Q ss_pred cccccccccccCCCCCchhcCCCCCceEeccCCcccccCCCCCCCCCCCceeeccccccccccc-cccccc-cceEEccC
Q 004994 143 LLDLSLNNNHLNGGIPDAFHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNNKLSGTLN-VLEDLH-LIDLNIEN 220 (720)
Q Consensus 143 L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~~-l~~l~l~~ 220 (720)
++.|+|++|.|+|.+|..++.|++|+.|+|++|+|+|.+|..++.+++|+.|+|++|+|+|.++ .+..+. |+.|+|++
T Consensus 420 v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~ 499 (623)
T PLN03150 420 IDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNG 499 (623)
T ss_pred EEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcC
Confidence 5566666666666666666666666666666666666666666666666666666666666554 244443 66677777
Q ss_pred CcCcccCCcccCCC----ccccccCccCCC
Q 004994 221 NLFSGPIPEKLLSI----PNFRKDGNPFNT 246 (720)
Q Consensus 221 N~l~g~~p~~~~~l----~~l~~~~n~~~~ 246 (720)
|+|+|.+|..+..+ ..+.+.+|+..|
T Consensus 500 N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc 529 (623)
T PLN03150 500 NSLSGRVPAALGGRLLHRASFNFTDNAGLC 529 (623)
T ss_pred CcccccCChHHhhccccCceEEecCCcccc
Confidence 77777777665432 234556666544
No 450
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.42 E-value=6.1e-13 Score=145.43 Aligned_cols=147 Identities=20% Similarity=0.218 Sum_probs=99.7
Q ss_pred cCCCCCCeeccCCCceEEEEEeCCCcEEEEEEeccccccccc--------------------------------------
Q 004994 440 NSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQT-------------------------------------- 481 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~-------------------------------------- 481 (720)
..|. .+.||.|++|.||+|++.+|+.||||+.++.......
T Consensus 118 ~~fd-~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~ 196 (437)
T TIGR01982 118 AEFE-EKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRR 196 (437)
T ss_pred hhCC-CcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHH
Confidence 3444 3679999999999999999999999998764311100
Q ss_pred HHHHHHHHHHHHcc----CCCceeEEEeEec-cCCeEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHH-HH
Q 004994 482 DEEFLELASTISRL----RHGNIVELIGYCN-EHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAAR-AL 555 (720)
Q Consensus 482 ~~~~~~e~~~l~~l----~H~niv~l~~~~~-~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~-~L 555 (720)
.-+|..|.+.+.++ +|.+-+.+-.++. .....++||||++|++|.++..... ... .+.+++..+++ .+
T Consensus 197 Eldf~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~---~~~---~~~~ia~~~~~~~l 270 (437)
T TIGR01982 197 ELDLRREAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDE---AGL---DRKALAENLARSFL 270 (437)
T ss_pred HHCHHHHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHh---cCC---CHHHHHHHHHHHHH
Confidence 01244455544444 2333333333332 2345799999999999988764211 111 23456655555 34
Q ss_pred HHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCC
Q 004994 556 QYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLF 596 (720)
Q Consensus 556 ~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~ 596 (720)
..+|.. |++|+|+||.||++++++.++++|||++..+.
T Consensus 271 ~ql~~~---g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 271 NQVLRD---GFFHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred HHHHhC---CceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 556654 99999999999999999999999999997764
No 451
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.42 E-value=2.6e-13 Score=154.87 Aligned_cols=147 Identities=27% Similarity=0.415 Sum_probs=74.7
Q ss_pred ceeEEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCCCccccCcEEEecCCcCCCCCcchhhccccccccccccc
Q 004994 72 NVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSNLPVTVRNFSLSGNQLTGSIPESLSRLTQLLDLSLNNN 151 (720)
Q Consensus 72 ~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~l~~N 151 (720)
+|+.|+|++|+|+. +|. .+++|+.|+|++|+|+ .+|. ++.+|+.|++++|+|+ .+|.. ..+|+.|+|++|
T Consensus 283 ~L~~L~Ls~N~Lt~-LP~---~p~~L~~LdLS~N~L~-~Lp~-lp~~L~~L~Ls~N~L~-~LP~l---p~~Lq~LdLS~N 352 (788)
T PRK15387 283 GLCKLWIFGNQLTS-LPV---LPPGLQELSVSDNQLA-SLPA-LPSELCKLWAYNNQLT-SLPTL---PSGLQELSVSDN 352 (788)
T ss_pred hcCEEECcCCcccc-ccc---cccccceeECCCCccc-cCCC-CcccccccccccCccc-ccccc---ccccceEecCCC
Confidence 45556666666653 332 2356777777777777 3443 2334444444444444 23321 123444444444
Q ss_pred ccCC-------------------CCCchhcCCCCCceEeccCCcccccCCCCCCCCCCCceeeccccccccccccccccc
Q 004994 152 HLNG-------------------GIPDAFHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNNKLSGTLNVLEDLH 212 (720)
Q Consensus 152 ~l~g-------------------~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~ 212 (720)
+|++ .+|.. ..+|+.|+|++|+|+ .+|... ++|+.|+|++|+|++.+... ..
T Consensus 353 ~Ls~LP~lp~~L~~L~Ls~N~L~~LP~l---~~~L~~LdLs~N~Lt-~LP~l~---s~L~~LdLS~N~LssIP~l~--~~ 423 (788)
T PRK15387 353 QLASLPTLPSELYKLWAYNNRLTSLPAL---PSGLKELIVSGNRLT-SLPVLP---SELKELMVSGNRLTSLPMLP--SG 423 (788)
T ss_pred ccCCCCCCCcccceehhhccccccCccc---ccccceEEecCCccc-CCCCcc---cCCCEEEccCCcCCCCCcch--hh
Confidence 4442 23322 134556666666665 344332 45566666666666543321 12
Q ss_pred cceEEccCCcCcccCCcccCCCcccc
Q 004994 213 LIDLNIENNLFSGPIPEKLLSIPNFR 238 (720)
Q Consensus 213 l~~l~l~~N~l~g~~p~~~~~l~~l~ 238 (720)
|..|++++|+|+ .+|..+.+++.|.
T Consensus 424 L~~L~Ls~NqLt-~LP~sl~~L~~L~ 448 (788)
T PRK15387 424 LLSLSVYRNQLT-RLPESLIHLSSET 448 (788)
T ss_pred hhhhhhccCccc-ccChHHhhccCCC
Confidence 555666666666 5666555444433
No 452
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.41 E-value=2.4e-13 Score=134.27 Aligned_cols=206 Identities=19% Similarity=0.330 Sum_probs=143.1
Q ss_pred HHHHHccCCCceeEEEeEeccC-----CeEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCC
Q 004994 489 ASTISRLRHGNIVELIGYCNEH-----GQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCE 563 (720)
Q Consensus 489 ~~~l~~l~H~niv~l~~~~~~~-----~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~ 563 (720)
+.-+-.+.|.|||++..|+.+. .+..++.|||..|++..+|+........+......++..||..||.|||+. .
T Consensus 118 FdnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~-~ 196 (458)
T KOG1266|consen 118 FDNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSC-D 196 (458)
T ss_pred HHHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhcc-C
Confidence 3445556799999999998654 357899999999999999987766667777777788999999999999985 7
Q ss_pred CCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCC---CcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHH
Q 004994 564 PPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGS---TNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLEL 639 (720)
Q Consensus 564 ~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~---~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~el 639 (720)
|+|+|+++.-+-|++..++-+|+.----. ...... .......-.+.++|.+||+- ..+.+..+|||+||+..+||
T Consensus 197 PpiihgnlTc~tifiq~ngLIkig~~ap~-s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlem 275 (458)
T KOG1266|consen 197 PPIIHGNLTCDTIFIQHNGLIKIGSVAPD-STHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEM 275 (458)
T ss_pred CccccCCcchhheeecCCceEEecccCcc-ccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHH
Confidence 89999999999999999988887531111 110000 00111223356789999987 44677899999999999999
Q ss_pred HhCCCCCCCCCCccccchhhhcccccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q 004994 640 LTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDL 716 (720)
Q Consensus 640 ltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L 716 (720)
..+..--.......+ ++ +.....+-..-.+ .=++++.+|++..|..||+|.+++.|.
T Consensus 276 ailEiq~tnseS~~~---~e---------e~ia~~i~~len~--------lqr~~i~kcl~~eP~~rp~ar~llfHp 332 (458)
T KOG1266|consen 276 AILEIQSTNSESKVE---VE---------ENIANVIIGLENG--------LQRGSITKCLEGEPNGRPDARLLLFHP 332 (458)
T ss_pred HHheeccCCCcceee---hh---------hhhhhheeeccCc--------cccCcCcccccCCCCCCcchhhhhcCc
Confidence 988754322211110 00 1111111100000 013678999999999999999988664
No 453
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.40 E-value=9.2e-13 Score=150.40 Aligned_cols=153 Identities=25% Similarity=0.361 Sum_probs=93.4
Q ss_pred ceeEEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCCCccccCcEEEecCCcCCCCCcchhhccccccccccccc
Q 004994 72 NVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSNLPVTVRNFSLSGNQLTGSIPESLSRLTQLLDLSLNNN 151 (720)
Q Consensus 72 ~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~l~~N 151 (720)
+|+.|+|.+|+|+. +|. .+++|++|+|++|+|+ .+|. ++.+|+.|+|++|.|+ .+|..+ .+|+.|+|++|
T Consensus 223 ~L~~L~L~~N~Lt~-LP~---lp~~Lk~LdLs~N~Lt-sLP~-lp~sL~~L~Ls~N~L~-~Lp~lp---~~L~~L~Ls~N 292 (788)
T PRK15387 223 HITTLVIPDNNLTS-LPA---LPPELRTLEVSGNQLT-SLPV-LPPGLLELSIFSNPLT-HLPALP---SGLCKLWIFGN 292 (788)
T ss_pred CCCEEEccCCcCCC-CCC---CCCCCcEEEecCCccC-cccC-cccccceeeccCCchh-hhhhch---hhcCEEECcCC
Confidence 56777777777774 443 2466777777777777 5664 3456777777777776 455432 45667777777
Q ss_pred ccCCCCCchhcCCCCCceEeccCCcccccCCCCCCCCCCCceeeccccccccccccccccccceEEccCCcCcccCCccc
Q 004994 152 HLNGGIPDAFHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNNKLSGTLNVLEDLHLIDLNIENNLFSGPIPEKL 231 (720)
Q Consensus 152 ~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~l~l~~N~l~g~~p~~~ 231 (720)
+|+ .+|.. +++|+.|+|++|+|+ .+|... .+|+.|++++|+|++.+... ..|+.|+|++|+|+ .+|...
T Consensus 293 ~Lt-~LP~~---p~~L~~LdLS~N~L~-~Lp~lp---~~L~~L~Ls~N~L~~LP~lp--~~Lq~LdLS~N~Ls-~LP~lp 361 (788)
T PRK15387 293 QLT-SLPVL---PPGLQELSVSDNQLA-SLPALP---SELCKLWAYNNQLTSLPTLP--SGLQELSVSDNQLA-SLPTLP 361 (788)
T ss_pred ccc-ccccc---ccccceeECCCCccc-cCCCCc---ccccccccccCccccccccc--cccceEecCCCccC-CCCCCC
Confidence 777 45542 357888888888887 455432 24555666666666543211 13667777777777 355544
Q ss_pred CCCccccccCccCC
Q 004994 232 LSIPNFRKDGNPFN 245 (720)
Q Consensus 232 ~~l~~l~~~~n~~~ 245 (720)
.++..|.+.+|...
T Consensus 362 ~~L~~L~Ls~N~L~ 375 (788)
T PRK15387 362 SELYKLWAYNNRLT 375 (788)
T ss_pred cccceehhhccccc
Confidence 55555555555443
No 454
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.31 E-value=1.5e-12 Score=143.79 Aligned_cols=151 Identities=14% Similarity=0.177 Sum_probs=96.6
Q ss_pred HhcCCCCCCeeccCCCceEEEEEeCC-CcEEEEEEeccccccc--------------------------------ccHH-
Q 004994 438 YTNSFSEGNFIGEGLLGSVYKAELPG-GKLLAVKKLSNTVSQR--------------------------------QTDE- 483 (720)
Q Consensus 438 ~~~~~~~~~~lg~G~~g~Vy~~~~~~-g~~vavK~l~~~~~~~--------------------------------~~~~- 483 (720)
.-..|+. +.||+|++|.||+|++++ |+.||||+.++..... ...+
T Consensus 118 ~F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~ 196 (537)
T PRK04750 118 WFDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKT 196 (537)
T ss_pred HHHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHH
Confidence 3455666 789999999999999877 9999999998653110 0011
Q ss_pred -----HHHHHHHHHHcc----CCCceeEEEeEecc-CCeEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHH
Q 004994 484 -----EFLELASTISRL----RHGNIVELIGYCNE-HGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAAR 553 (720)
Q Consensus 484 -----~~~~e~~~l~~l----~H~niv~l~~~~~~-~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~ 553 (720)
+|.+|+.-+.++ .+.+.+.+-.++.+ ....+|||||+.|+.+.++-.... ...+ +..++...++
T Consensus 197 l~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~---~g~d---~~~la~~~v~ 270 (537)
T PRK04750 197 LHDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRA---AGTD---MKLLAERGVE 270 (537)
T ss_pred HHHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHh---cCCC---HHHHHHHHHH
Confidence 234444433333 24444444444433 446789999999999987532111 1111 1122222221
Q ss_pred HHHHHHhcCCCCeeecCCCCCCeEEcCCC----CeEEccccCCCCCCC
Q 004994 554 ALQYLQEVCEPPIVHGNFKSSNILLDEKL----IVRVSDCGLAPLLFS 597 (720)
Q Consensus 554 ~L~~LH~~~~~~ivHrDlkp~NiLl~~~~----~~kl~DFGla~~~~~ 597 (720)
.|+++....|++|+|+||.||+++.++ ++++.|||++..+..
T Consensus 271 --~~~~Qif~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 271 --VFFTQVFRDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred --HHHHHHHhCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 234444445999999999999999988 999999999877643
No 455
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.30 E-value=2.3e-12 Score=138.53 Aligned_cols=251 Identities=21% Similarity=0.236 Sum_probs=176.1
Q ss_pred cCCCCCCeecc--CCCceEEEEEe---CCCcEEEEEEecccccccccHHHHHHHHHHHHcc-CCCceeEEEeEeccCCeE
Q 004994 440 NSFSEGNFIGE--GLLGSVYKAEL---PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRL-RHGNIVELIGYCNEHGQH 513 (720)
Q Consensus 440 ~~~~~~~~lg~--G~~g~Vy~~~~---~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~ 513 (720)
..|.....+|. |.+|.||.+.. .++..+|+|+-+...........-.+|+...+++ .|+|.++.+..+.+.+..
T Consensus 114 ~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~l 193 (524)
T KOG0601|consen 114 QRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGIL 193 (524)
T ss_pred hhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcc
Confidence 34555678999 99999999954 5688999998443333223333344566666666 499999989999999999
Q ss_pred EEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHH----HHHHHHhcCCCCeeecCCCCCCeEEcCC-CCeEEcc
Q 004994 514 LLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAAR----ALQYLQEVCEPPIVHGNFKSSNILLDEK-LIVRVSD 588 (720)
Q Consensus 514 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~----~L~~LH~~~~~~ivHrDlkp~NiLl~~~-~~~kl~D 588 (720)
++-+|++. .+|.++-+... ..++......+..+..+ ||..+|.. +++|-|+||.||+...+ ...+++|
T Consensus 194 fiqtE~~~-~sl~~~~~~~~---~~~p~~~l~~~~~~~~~~~~~al~~~hs~---~~~~~~~kp~~i~~~~~~~s~~~~d 266 (524)
T KOG0601|consen 194 FIQTELCG-ESLQSYCHTPC---NFLPDNLLWNSLRDWLSRDVTALSHLHSN---NIVHDDLKPANIFTTSDWTSCKLTD 266 (524)
T ss_pred eeeecccc-chhHHhhhccc---ccCCchhhhhHHhhhhhcccccccccCCC---cccccccchhheecccccceeecCC
Confidence 99999988 47776665321 22334444555555555 88888876 89999999999999999 8899999
Q ss_pred ccCCCCCCCCCCcccc---cCccccccCCCCccCCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhccccc
Q 004994 589 CGLAPLLFSGSTNELS---EGLLTAHGSGAPEFESGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRL 665 (720)
Q Consensus 589 FGla~~~~~~~~~~~~---~~~~~~~~~~aPE~~~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~ 665 (720)
||+...+.++...... ....+..-|++||...+-++...|+|++|.+.+|..++..+........ |.
T Consensus 267 f~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~------W~---- 336 (524)
T KOG0601|consen 267 FGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSS------WS---- 336 (524)
T ss_pred cceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCC------cc----
Confidence 9999887654422111 1124556799999999999999999999999999999987764431111 11
Q ss_pred CchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 004994 666 HDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQ 714 (720)
Q Consensus 666 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 714 (720)
.++.+. +...+.+....++...+..++..+|-.|++.+++..
T Consensus 337 ----~~r~~~---ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~ 378 (524)
T KOG0601|consen 337 ----QLRQGY---IPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTA 378 (524)
T ss_pred ----cccccc---CchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence 111111 111222222345566899999999999999887653
No 456
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.26 E-value=1.8e-13 Score=144.06 Aligned_cols=151 Identities=26% Similarity=0.463 Sum_probs=78.2
Q ss_pred eecCceeEEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCCCcc-ccCcEEEecCCcCCCCCcchhhcccccccc
Q 004994 68 CVFSNVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSNLP-VTVRNFSLSGNQLTGSIPESLSRLTQLLDL 146 (720)
Q Consensus 68 c~~~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~-~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L 146 (720)
|.+-.|+.+.|..|.+- .+|..+++|..|++|||+.|+++ .+|..+. --|+.|.+++|+++ .+|+.++.+..|..|
T Consensus 95 ~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lpLkvli~sNNkl~-~lp~~ig~~~tl~~l 171 (722)
T KOG0532|consen 95 CAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLPLKVLIVSNNKLT-SLPEEIGLLPTLAHL 171 (722)
T ss_pred HHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCcceeEEEecCccc-cCCcccccchhHHHh
Confidence 33344555555555554 45555555555555555555555 4454443 34555555555555 555555555555555
Q ss_pred cccccccCCCCCchhcCCCCCceEeccCCcccccCCCCCCCCCCCceeeccccccccccccccccc-cceEEccCCcCc
Q 004994 147 SLNNNHLNGGIPDAFHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNNKLSGTLNVLEDLH-LIDLNIENNLFS 224 (720)
Q Consensus 147 ~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~-l~~l~l~~N~l~ 224 (720)
|.+.|.+. .+|..++++.+|+.|.+..|++. .+|+.+..| .|..||+|+|+++..+-.+..+. |++|-|.+|.|.
T Consensus 172 d~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~~L-pLi~lDfScNkis~iPv~fr~m~~Lq~l~LenNPLq 247 (722)
T KOG0532|consen 172 DVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELCSL-PLIRLDFSCNKISYLPVDFRKMRHLQVLQLENNPLQ 247 (722)
T ss_pred hhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHhCC-ceeeeecccCceeecchhhhhhhhheeeeeccCCCC
Confidence 55555554 45555555555555555555554 455555433 35555555555555444443333 555555555554
No 457
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.25 E-value=2.6e-11 Score=115.67 Aligned_cols=129 Identities=18% Similarity=0.116 Sum_probs=94.5
Q ss_pred CeeccCCCceEEEEEeCCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCcee-EEEeEeccCCeEEEEEeeCCCCC
Q 004994 446 NFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIV-ELIGYCNEHGQHLLVYDYGGNCT 524 (720)
Q Consensus 446 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv-~l~~~~~~~~~~~lv~e~~~~gs 524 (720)
+.++.|.++.||+++.. +..|++|....... ....+..|+++++.+.+.+++ +++.+..+ ..++||||+++.+
T Consensus 4 ~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~---~~~~~~~E~~~l~~l~~~~~~P~~~~~~~~--~~~lv~e~i~G~~ 77 (170)
T cd05151 4 SPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE---LLINRENEAENSKLAAEAGIGPKLYYFDPE--TGVLITEFIEGSE 77 (170)
T ss_pred eecCCcccCceEEEEEC-CeEEEEEeCCCCcc---cccCHHHHHHHHHHHHHhCCCCceEEEeCC--CCeEEEEecCCCc
Confidence 56889999999999865 67899999764421 123456788888888655544 55555432 3579999999987
Q ss_pred HHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcC--CCCeeecCCCCCCeEEcCCCCeEEccccCCC
Q 004994 525 LHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVC--EPPIVHGNFKSSNILLDEKLIVRVSDCGLAP 593 (720)
Q Consensus 525 L~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~--~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~ 593 (720)
+.+.. . ....++.+++++|+.||... ...++|+|++|.||+++ ++.++++|||.+.
T Consensus 78 l~~~~---------~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~ 135 (170)
T cd05151 78 LLTED---------F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAG 135 (170)
T ss_pred ccccc---------c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEeccccc
Confidence 75420 0 11235678899999999873 23469999999999999 6689999999875
No 458
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.21 E-value=7.2e-11 Score=144.94 Aligned_cols=96 Identities=21% Similarity=0.213 Sum_probs=43.5
Q ss_pred cccccccccccCCCCCchhcCCCCCceEeccCCcccccCCCCCCCCCCCceeeccccccccccccccccccceEEccCCc
Q 004994 143 LLDLSLNNNHLNGGIPDAFHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNNKLSGTLNVLEDLHLIDLNIENNL 222 (720)
Q Consensus 143 L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~l~l~~N~ 222 (720)
|+.|+|++|...+.+|..++++++|+.|+|++|..-+.+|..+ ++++|+.|+|++|..-..++.. ...|+.|+|++|.
T Consensus 780 L~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~~-~~nL~~L~Ls~n~ 857 (1153)
T PLN03210 780 LTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTFPDI-STNISDLNLSRTG 857 (1153)
T ss_pred chheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCcccccccc-ccccCEeECCCCC
Confidence 3333444443333444444444444444444432222344333 3444444444443221111111 0135667777777
Q ss_pred CcccCCcccCCCccccccC
Q 004994 223 FSGPIPEKLLSIPNFRKDG 241 (720)
Q Consensus 223 l~g~~p~~~~~l~~l~~~~ 241 (720)
++ .+|..+..+++|+..+
T Consensus 858 i~-~iP~si~~l~~L~~L~ 875 (1153)
T PLN03210 858 IE-EVPWWIEKFSNLSFLD 875 (1153)
T ss_pred Cc-cChHHHhcCCCCCEEE
Confidence 76 5676666666655543
No 459
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.21 E-value=7.9e-13 Score=146.67 Aligned_cols=167 Identities=29% Similarity=0.414 Sum_probs=96.4
Q ss_pred ceeEEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCCCcc----------------------------ccCcEEE
Q 004994 72 NVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSNLP----------------------------VTVRNFS 123 (720)
Q Consensus 72 ~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~----------------------------~~L~~L~ 123 (720)
+|+.|.+..|.++ .+|+.+..+++|++|||..|+|. .+|..+. ..|+.|+
T Consensus 288 ~L~~l~~~~nel~-yip~~le~~~sL~tLdL~~N~L~-~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~Ly 365 (1081)
T KOG0618|consen 288 SLVSLSAAYNELE-YIPPFLEGLKSLRTLDLQSNNLP-SLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELY 365 (1081)
T ss_pred hHHHHHhhhhhhh-hCCCcccccceeeeeeehhcccc-ccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHH
Confidence 4555566666665 45556666666666666666665 4442110 2355566
Q ss_pred ecCCcCCCCCcchhhcccccccccccccccCCCCCc-hhcCCCCCceEeccCCcccccCCCCCCCCCCCceeeccccccc
Q 004994 124 LSGNQLTGSIPESLSRLTQLLDLSLNNNHLNGGIPD-AFHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNNKLS 202 (720)
Q Consensus 124 Ls~N~l~g~~p~~l~~l~~L~~L~l~~N~l~g~~p~-~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~ 202 (720)
|.+|.|+...=+.|.+...|+.|+|++|+|. .+|+ .+.+|..|++|+||+|+|+ .+|..+.++..|++|...+|+|.
T Consensus 366 lanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~-~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~ 443 (1081)
T KOG0618|consen 366 LANNHLTDSCFPVLVNFKHLKVLHLSYNRLN-SFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL 443 (1081)
T ss_pred HhcCcccccchhhhccccceeeeeecccccc-cCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCcee
Confidence 6666666655555666666666666666665 3443 3556666666666666666 66666666666666666666666
Q ss_pred ccccccccc-ccceEEccCCcCcc-cCCcccC--CCccccccCcc
Q 004994 203 GTLNVLEDL-HLIDLNIENNLFSG-PIPEKLL--SIPNFRKDGNP 243 (720)
Q Consensus 203 ~~~~~~~~~-~l~~l~l~~N~l~g-~~p~~~~--~l~~l~~~~n~ 243 (720)
..| .+..+ .|+.+|+|.|+|+- .+|..+. +|..|.+.||.
T Consensus 444 ~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~p~p~LkyLdlSGN~ 487 (1081)
T KOG0618|consen 444 SFP-ELAQLPQLKVLDLSCNNLSEVTLPEALPSPNLKYLDLSGNT 487 (1081)
T ss_pred ech-hhhhcCcceEEecccchhhhhhhhhhCCCcccceeeccCCc
Confidence 555 33333 36666666666653 2333222 34444444554
No 460
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.18 E-value=6e-13 Score=147.58 Aligned_cols=170 Identities=25% Similarity=0.408 Sum_probs=93.4
Q ss_pred CceeEEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCCCcc-------------------------ccCcEEEec
Q 004994 71 SNVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSNLP-------------------------VTVRNFSLS 125 (720)
Q Consensus 71 ~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~-------------------------~~L~~L~Ls 125 (720)
.+++.++++.|++++ +|++++.+.+|+.|+..+|+|+ .+|..+. ..|+.|+|.
T Consensus 241 ~nl~~~dis~n~l~~-lp~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel~yip~~le~~~sL~tLdL~ 318 (1081)
T KOG0618|consen 241 LNLQYLDISHNNLSN-LPEWIGACANLEALNANHNRLV-ALPLRISRITSLVSLSAAYNELEYIPPFLEGLKSLRTLDLQ 318 (1081)
T ss_pred ccceeeecchhhhhc-chHHHHhcccceEecccchhHH-hhHHHHhhhhhHHHHHhhhhhhhhCCCcccccceeeeeeeh
Confidence 468888889899886 4588899999999999999986 6665443 244455555
Q ss_pred CCcCCCCCcchhhc--------------------------ccccccccccccccCCCCCchhcCCCCCceEeccCCcccc
Q 004994 126 GNQLTGSIPESLSR--------------------------LTQLLDLSLNNNHLNGGIPDAFHQFTGLINFDLSANNLTG 179 (720)
Q Consensus 126 ~N~l~g~~p~~l~~--------------------------l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g 179 (720)
.|+|. .+|+.+-. ++.|+.|+|.+|.|+...-+.+.+.+.|+.|+|++|+|.
T Consensus 319 ~N~L~-~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~- 396 (1081)
T KOG0618|consen 319 SNNLP-SLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLN- 396 (1081)
T ss_pred hcccc-ccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccc-
Confidence 55554 33332211 112334444444444433334444555555555555554
Q ss_pred cCCC-CCCCCCCCceeeccccccccccccccccc-cceEEccCCcCcccCCcccCCCccccccCccCCC
Q 004994 180 QLPP-STRNLSSLYSLHLQNNKLSGTLNVLEDLH-LIDLNIENNLFSGPIPEKLLSIPNFRKDGNPFNT 246 (720)
Q Consensus 180 ~~p~-~~~~l~~L~~L~l~~N~l~~~~~~~~~~~-l~~l~l~~N~l~g~~p~~~~~l~~l~~~~n~~~~ 246 (720)
.+|. .+.++..|+.|+||+|+|+..+..+..+. |..|...+|++. ..| ++..++.|++.+.+.|.
T Consensus 397 ~fpas~~~kle~LeeL~LSGNkL~~Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~~l~qL~~lDlS~N~ 463 (1081)
T KOG0618|consen 397 SFPASKLRKLEELEELNLSGNKLTTLPDTVANLGRLHTLRAHSNQLL-SFP-ELAQLPQLKVLDLSCNN 463 (1081)
T ss_pred cCCHHHHhchHHhHHHhcccchhhhhhHHHHhhhhhHHHhhcCCcee-ech-hhhhcCcceEEecccch
Confidence 3433 23445555555555555554443333332 445555555555 445 45555555555555443
No 461
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.18 E-value=2.2e-12 Score=136.59 Aligned_cols=173 Identities=24% Similarity=0.350 Sum_probs=122.5
Q ss_pred cCceeEEEecCCcccccCCcCcCCCCC---ccEEeccCCccccc----CCCCc---cccCcEEEecCCcCCCC----Ccc
Q 004994 70 FSNVTEIRLTGMNLGGVLADTLGDLES---VINIDLSNNHIGGS----IPSNL---PVTVRNFSLSGNQLTGS----IPE 135 (720)
Q Consensus 70 ~~~l~~l~L~~n~l~~~~~~~~~~l~~---L~~L~L~~N~l~g~----ip~~~---~~~L~~L~Ls~N~l~g~----~p~ 135 (720)
+.+|+.|+|++|.+.+..+..+..+.+ |+.|+|++|++++. +...+ +.+|+.|+|++|.+++. ++.
T Consensus 80 ~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~ 159 (319)
T cd00116 80 GCGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAK 159 (319)
T ss_pred cCceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHH
Confidence 458999999999998766666666655 99999999998732 21222 25789999999999853 344
Q ss_pred hhhcccccccccccccccCCC----CCchhcCCCCCceEeccCCccccc----CCCCCCCCCCCceeecccccccccc--
Q 004994 136 SLSRLTQLLDLSLNNNHLNGG----IPDAFHQFTGLINFDLSANNLTGQ----LPPSTRNLSSLYSLHLQNNKLSGTL-- 205 (720)
Q Consensus 136 ~l~~l~~L~~L~l~~N~l~g~----~p~~~~~l~~L~~L~ls~N~l~g~----~p~~~~~l~~L~~L~l~~N~l~~~~-- 205 (720)
.+..+++|+.|+|++|.+++. ++..+..+++|+.|+|++|.+++. ++..+..+++|+.|++++|.+++..
T Consensus 160 ~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~~ 239 (319)
T cd00116 160 ALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAA 239 (319)
T ss_pred HHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchHHHH
Confidence 566778899999999999842 444566677999999999998742 4455677889999999999988521
Q ss_pred cccc-----ccccceEEccCCcCc----ccCCcccCCCccccccCc
Q 004994 206 NVLE-----DLHLIDLNIENNLFS----GPIPEKLLSIPNFRKDGN 242 (720)
Q Consensus 206 ~~~~-----~~~l~~l~l~~N~l~----g~~p~~~~~l~~l~~~~n 242 (720)
.... ...|+.|++++|.++ ..+...+..+++|+..+.
T Consensus 240 ~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l 285 (319)
T cd00116 240 ALASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDL 285 (319)
T ss_pred HHHHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEEC
Confidence 1111 235899999999987 223334444444444333
No 462
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.17 E-value=1.8e-11 Score=131.72 Aligned_cols=257 Identities=19% Similarity=0.162 Sum_probs=175.2
Q ss_pred ccCHHH-HHHHhcCCCCCCeeccCCCceEEEEEe--CCCcEEEEEEecccccccccHHHHHHHHHHHHcc-CCCceeEEE
Q 004994 429 VFTIAS-LQQYTNSFSEGNFIGEGLLGSVYKAEL--PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRL-RHGNIVELI 504 (720)
Q Consensus 429 ~~~~~~-~~~~~~~~~~~~~lg~G~~g~Vy~~~~--~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~ 504 (720)
.|...+ ......+|.....||.|.|+.||++.. .++..|++|.+.+.......+..-..|+-+...+ .|.+++.++
T Consensus 253 i~~~~~~~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~ 332 (524)
T KOG0601|consen 253 IFTTSDWTSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKN 332 (524)
T ss_pred eecccccceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCC
Confidence 344444 445667888899999999999999854 4688999999876654443333334555555555 588999988
Q ss_pred eEeccCCeEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCC-CC
Q 004994 505 GYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEK-LI 583 (720)
Q Consensus 505 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~-~~ 583 (720)
..+...++.|+--||++++++.... .....++...++++..+++.++.++|+. .++|+|+||+||++..+ +.
T Consensus 333 ~~W~~~r~~~ip~e~~~~~s~~l~~----~~~~~~d~~~~~~~~~q~~~~l~~i~s~---~~~~~d~~psni~i~~~~~~ 405 (524)
T KOG0601|consen 333 SSWSQLRQGYIPLEFCEGGSSSLRS----VTSQMLDEDPRLRLTAQILTALNVIHSK---LFVHLDVKPSNILISNDGFF 405 (524)
T ss_pred CCccccccccCchhhhcCcchhhhh----HHHHhcCcchhhhhHHHHHhccccccch---hhhcccccccceeeccchhh
Confidence 8887777788999999999877655 2234456667788889999999999976 89999999999999886 88
Q ss_pred eEEccccCCCCCCCCCCcccccCccccccCCCCccC--CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhc
Q 004994 584 VRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE--SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWA 661 (720)
Q Consensus 584 ~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~--~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~ 661 (720)
.+++|||++..+.-... ........|...|.+ ...+..+.|+||||.-+.|.++|.. +.... +.|.
T Consensus 406 ~~~~~~~~~t~~~~~~~----~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~-ls~~~-------~~~~ 473 (524)
T KOG0601|consen 406 SKLGDFGCWTRLAFSSG----VFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSP-LSESG-------VQSL 473 (524)
T ss_pred hhccccccccccceecc----cccccccccccchhhccccccccccccccccccccccccCcc-cCccc-------ccce
Confidence 89999999864321110 001122233224444 3456789999999999999999864 32211 1111
Q ss_pred ccccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 004994 662 IPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLL 717 (720)
Q Consensus 662 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 717 (720)
. +..-.-+...+. ..++..+.+.+...++..||.+.++..+.+
T Consensus 474 ~--------i~~~~~p~~~~~-----~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~ 516 (524)
T KOG0601|consen 474 T--------IRSGDTPNLPGL-----KLQLQVLLKVMINPDRKRRPSAVELSLHSE 516 (524)
T ss_pred e--------eecccccCCCch-----HHhhhhhhhhhcCCccccchhhhhhcccch
Confidence 0 000001111111 145667888999999999999988776543
No 463
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.17 E-value=1.1e-10 Score=143.21 Aligned_cols=87 Identities=25% Similarity=0.355 Sum_probs=47.4
Q ss_pred CceeEEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCCCcc--ccCcEEEecCCcCCCCCcchhhcccccccccc
Q 004994 71 SNVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSNLP--VTVRNFSLSGNQLTGSIPESLSRLTQLLDLSL 148 (720)
Q Consensus 71 ~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~--~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~l 148 (720)
.+|+.|+|.+|+|. .++..+..+++|+.|+|++|..-+.+|. +. ++|+.|+|++|..-..+|..++++++|+.|++
T Consensus 611 ~~L~~L~L~~s~l~-~L~~~~~~l~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L 688 (1153)
T PLN03210 611 ENLVKLQMQGSKLE-KLWDGVHSLTGLRNIDLRGSKNLKEIPD-LSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDM 688 (1153)
T ss_pred cCCcEEECcCcccc-ccccccccCCCCCEEECCCCCCcCcCCc-cccCCcccEEEecCCCCccccchhhhccCCCCEEeC
Confidence 45666666666655 3455555666666666665543335553 22 45666666655444455656666666666666
Q ss_pred cccccCCCCCc
Q 004994 149 NNNHLNGGIPD 159 (720)
Q Consensus 149 ~~N~l~g~~p~ 159 (720)
++|..-+.+|.
T Consensus 689 ~~c~~L~~Lp~ 699 (1153)
T PLN03210 689 SRCENLEILPT 699 (1153)
T ss_pred CCCCCcCccCC
Confidence 55433234444
No 464
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.14 E-value=5.5e-10 Score=107.37 Aligned_cols=137 Identities=17% Similarity=0.158 Sum_probs=96.1
Q ss_pred CeeccCCCceEEEEEeCC-------CcEEEEEEecccccc--------------------cccHHHHH----HHHHHHHc
Q 004994 446 NFIGEGLLGSVYKAELPG-------GKLLAVKKLSNTVSQ--------------------RQTDEEFL----ELASTISR 494 (720)
Q Consensus 446 ~~lg~G~~g~Vy~~~~~~-------g~~vavK~l~~~~~~--------------------~~~~~~~~----~e~~~l~~ 494 (720)
..||.|.=+.||.|.-.+ +..+|||+.+-.... ....+.+. +|++.|++
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 568999999999996443 479999987532110 01122333 78889988
Q ss_pred cCC--CceeEEEeEeccCCeEEEEEeeCCCCCHHH-HhhccchhccccCHHHHHHHHHHHHHHHHHH-HhcCCCCeeecC
Q 004994 495 LRH--GNIVELIGYCNEHGQHLLVYDYGGNCTLHD-LLHSDEEAHKKFSWNIRIRVALGAARALQYL-QEVCEPPIVHGN 570 (720)
Q Consensus 495 l~H--~niv~l~~~~~~~~~~~lv~e~~~~gsL~~-~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~L-H~~~~~~ivHrD 570 (720)
+.. -++...+++ ...++||||+++..+.. .+.. ..++......+..++..+|..+ |.. +|||+|
T Consensus 83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd-----~~~~~~~~~~i~~~i~~~l~~l~H~~---glVHGD 150 (197)
T cd05146 83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKD-----AKLNDEEMKNAYYQVLSMMKQLYKEC---NLVHAD 150 (197)
T ss_pred HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhc-----cccCHHHHHHHHHHHHHHHHHHHHhC---CeecCC
Confidence 853 567777765 45789999998754321 1211 1233344566778899999988 555 999999
Q ss_pred CCCCCeEEcCCCCeEEccccCCCCC
Q 004994 571 FKSSNILLDEKLIVRVSDCGLAPLL 595 (720)
Q Consensus 571 lkp~NiLl~~~~~~kl~DFGla~~~ 595 (720)
|++.|||++ ++.+.|+|||.|-..
T Consensus 151 Ls~~NIL~~-~~~v~iIDF~qav~~ 174 (197)
T cd05146 151 LSEYNMLWH-DGKVWFIDVSQSVEP 174 (197)
T ss_pred CCHHHEEEE-CCcEEEEECCCceeC
Confidence 999999997 467999999988654
No 465
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.11 E-value=5e-11 Score=130.21 Aligned_cols=133 Identities=31% Similarity=0.456 Sum_probs=68.5
Q ss_pred CceeEeecCcee---EEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCCCcc--c-cCcEEEecCCcCCCCCcch
Q 004994 63 WQGVFCVFSNVT---EIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSNLP--V-TVRNFSLSGNQLTGSIPES 136 (720)
Q Consensus 63 w~gv~c~~~~l~---~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~--~-~L~~L~Ls~N~l~g~~p~~ 136 (720)
+.+..+...++. .+++..|.+... ...+..++.++.|++.+|.++ .||.... . +|+.|++++|++. .+|..
T Consensus 82 ~l~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~ 158 (394)
T COG4886 82 SLDGSENLLNLLPLPSLDLNLNRLRSN-ISELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSP 158 (394)
T ss_pred cccccccccCCCCCceeeccccccccC-chhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhh
Confidence 334444444433 355555555322 223334455555555555555 4444433 1 4555555555555 45455
Q ss_pred hhcccccccccccccccCCCCCchhcCCCCCceEeccCCcccccCCCCCCCCCCCceeeccccc
Q 004994 137 LSRLTQLLDLSLNNNHLNGGIPDAFHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNNK 200 (720)
Q Consensus 137 l~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~ 200 (720)
+..+++|+.|++++|+++ .+|...+.++.|+.|++++|+++ .+|..+..+..|+.|.+++|.
T Consensus 159 ~~~l~~L~~L~l~~N~l~-~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~ 220 (394)
T COG4886 159 LRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNS 220 (394)
T ss_pred hhccccccccccCCchhh-hhhhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCc
Confidence 555555555555555555 44444445555555555555555 555544444445555555554
No 466
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.10 E-value=1.3e-09 Score=118.57 Aligned_cols=168 Identities=20% Similarity=0.226 Sum_probs=120.8
Q ss_pred EeCCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEeeCCCCCHHHHhhccchhcccc
Q 004994 460 ELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKF 539 (720)
Q Consensus 460 ~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~ 539 (720)
+..++.+|.|...+.... .......+-++.++.++||||++++..+...+..|+|+|-+.- |..++...
T Consensus 33 ~k~~~~~vsVF~~~~~~~--~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~P--l~~~lk~l------- 101 (690)
T KOG1243|consen 33 RKADGGPVSVFVYKRSNG--EVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVRP--LETVLKEL------- 101 (690)
T ss_pred eeccCCceEEEEEeCCCc--hhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeecccc--HHHHHHHh-------
Confidence 456788898888864322 2234456778899999999999999999999999999998754 55555321
Q ss_pred CHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCCCcccccCccccccCCCCccC
Q 004994 540 SWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE 619 (720)
Q Consensus 540 ~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~ 619 (720)
......-.+.||+.||.|||+.| +++|++|.-+.|+++..|+.||++|-++....... ...........|..|+-.
T Consensus 102 ~~~~v~~Gl~qIl~AL~FL~~d~--~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~--~~~~~~~~~~s~~~P~~~ 177 (690)
T KOG1243|consen 102 GKEEVCLGLFQILAALSFLNDDC--NLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFN--APAKSLYLIESFDDPEEI 177 (690)
T ss_pred HHHHHHHHHHHHHHHHHHHhccC--CeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCC--cccccchhhhcccChhhc
Confidence 12334456789999999999765 89999999999999999999999998875432111 111112223344555433
Q ss_pred CCCCCCccchHhHHHHHHHHHhCC
Q 004994 620 SGSYSCQSDVYSLGVVMLELLTGR 643 (720)
Q Consensus 620 ~~~~~~~~Dv~S~Gvvl~elltG~ 643 (720)
.. -+-..|.|-||++++|++.|.
T Consensus 178 ~~-s~~s~D~~~Lg~li~el~ng~ 200 (690)
T KOG1243|consen 178 DP-SEWSIDSWGLGCLIEELFNGS 200 (690)
T ss_pred Cc-cccchhhhhHHHHHHHHhCcc
Confidence 11 113579999999999999993
No 467
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.10 E-value=7.1e-10 Score=110.73 Aligned_cols=143 Identities=22% Similarity=0.311 Sum_probs=107.0
Q ss_pred CeeccCCCceEEEEEeCCCcEEEEEEecccccccccHHHHHHHHHHHHccCCC--ceeEEEeEeccC---CeEEEEEeeC
Q 004994 446 NFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHG--NIVELIGYCNEH---GQHLLVYDYG 520 (720)
Q Consensus 446 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~--niv~l~~~~~~~---~~~~lv~e~~ 520 (720)
+.|+.|.++.||++...+|+.+++|........ .....+..|.++++.+++. .+.+++.+..+. +..++||||+
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~-~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i 82 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALL-PSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERV 82 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccC-cccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEe
Confidence 568999999999998877789999997643221 2345678899999998763 467788877664 3678999999
Q ss_pred CCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcC--------------------------------------
Q 004994 521 GNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVC-------------------------------------- 562 (720)
Q Consensus 521 ~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~-------------------------------------- 562 (720)
++.++.+.+.. ..++...+..++.+++++|.+||+..
T Consensus 83 ~G~~l~~~~~~-----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (223)
T cd05154 83 DGRVLRDRLLR-----PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAM 157 (223)
T ss_pred CCEecCCCCCC-----CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHH
Confidence 99887765421 23455566677777777777777421
Q ss_pred ---------------CCCeeecCCCCCCeEEcC--CCCeEEccccCCCC
Q 004994 563 ---------------EPPIVHGNFKSSNILLDE--KLIVRVSDCGLAPL 594 (720)
Q Consensus 563 ---------------~~~ivHrDlkp~NiLl~~--~~~~kl~DFGla~~ 594 (720)
...++|+|++|.||+++. ++.+.|+||+.+..
T Consensus 158 ~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 158 ERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 245799999999999998 66789999998753
No 468
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.07 E-value=8.4e-12 Score=132.20 Aligned_cols=161 Identities=29% Similarity=0.345 Sum_probs=84.0
Q ss_pred CceeEeecCceeEEEecCCccccc----CCcCcCCCCCccEEeccCCcccccCCC-------Ccc--ccCcEEEecCCcC
Q 004994 63 WQGVFCVFSNVTEIRLTGMNLGGV----LADTLGDLESVINIDLSNNHIGGSIPS-------NLP--VTVRNFSLSGNQL 129 (720)
Q Consensus 63 w~gv~c~~~~l~~l~L~~n~l~~~----~~~~~~~l~~L~~L~L~~N~l~g~ip~-------~~~--~~L~~L~Ls~N~l 129 (720)
|...+-.+.+++.|+|+++.++.. ++..+...++|+.|++++|.+.+ ++. .+. .+|+.|+|++|.+
T Consensus 15 ~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~-~~~~~~~~~~~l~~~~~L~~L~l~~~~~ 93 (319)
T cd00116 15 ATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGR-IPRGLQSLLQGLTKGCGLQELDLSDNAL 93 (319)
T ss_pred hHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCC-cchHHHHHHHHHHhcCceeEEEccCCCC
Confidence 444444444566666666666321 34445555566666666665542 121 111 3566666666666
Q ss_pred CCCCcchhhcccc---cccccccccccCC----CCCchhcCC-CCCceEeccCCccccc----CCCCCCCCCCCceeecc
Q 004994 130 TGSIPESLSRLTQ---LLDLSLNNNHLNG----GIPDAFHQF-TGLINFDLSANNLTGQ----LPPSTRNLSSLYSLHLQ 197 (720)
Q Consensus 130 ~g~~p~~l~~l~~---L~~L~l~~N~l~g----~~p~~~~~l-~~L~~L~ls~N~l~g~----~p~~~~~l~~L~~L~l~ 197 (720)
.+..+..+..+.+ |+.|++++|++++ .+...+..+ ++|+.|+|++|.+++. ++..+..+.+|+.|+|+
T Consensus 94 ~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~ 173 (319)
T cd00116 94 GPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKALRANRDLKELNLA 173 (319)
T ss_pred ChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHHHhCCCcCEEECc
Confidence 6555555555544 6666666666652 222334444 5666666666666532 22334455566666666
Q ss_pred cccccccc-----cccc-ccccceEEccCCcCc
Q 004994 198 NNKLSGTL-----NVLE-DLHLIDLNIENNLFS 224 (720)
Q Consensus 198 ~N~l~~~~-----~~~~-~~~l~~l~l~~N~l~ 224 (720)
+|.+++.. ..+. ...|+.|++++|.++
T Consensus 174 ~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~ 206 (319)
T cd00116 174 NNGIGDAGIRALAEGLKANCNLEVLDLNNNGLT 206 (319)
T ss_pred CCCCchHHHHHHHHHHHhCCCCCEEeccCCccC
Confidence 66665321 1111 123666666666655
No 469
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.04 E-value=1.2e-10 Score=127.11 Aligned_cols=168 Identities=34% Similarity=0.489 Sum_probs=137.3
Q ss_pred CceeEEEecCCcccccCCcCcCCCC-CccEEeccCCcccccCCCCc--cccCcEEEecCCcCCCCCcchhhccccccccc
Q 004994 71 SNVTEIRLTGMNLGGVLADTLGDLE-SVINIDLSNNHIGGSIPSNL--PVTVRNFSLSGNQLTGSIPESLSRLTQLLDLS 147 (720)
Q Consensus 71 ~~l~~l~L~~n~l~~~~~~~~~~l~-~L~~L~L~~N~l~g~ip~~~--~~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ 147 (720)
+.++.|++.+|.++ .+++....+. +|+.|++++|++. .+|..+ .++|+.|++++|+++ .+|...+.+++|+.|+
T Consensus 116 ~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~~~L~~L~ 192 (394)
T COG4886 116 TNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLNNLD 192 (394)
T ss_pred cceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCchhh-hhhhhhhhhhhhhhee
Confidence 56899999999999 4677777785 9999999999999 775444 489999999999999 8887777889999999
Q ss_pred ccccccCCCCCchhcCCCCCceEeccCCcccccCCCCCCCCCCCceeeccccccccccccccccc-cceEEccCCcCccc
Q 004994 148 LNNNHLNGGIPDAFHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNNKLSGTLNVLEDLH-LIDLNIENNLFSGP 226 (720)
Q Consensus 148 l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~-l~~l~l~~N~l~g~ 226 (720)
+++|+++ .+|.....+..|++|.+++|.+. .++..+.++.++..|.+.+|++...+..+..+. ++.|++++|.++ .
T Consensus 193 ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~~~~~~~~~l~~l~~L~~s~n~i~-~ 269 (394)
T COG4886 193 LSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLEDLPESIGNLSNLETLDLSNNQIS-S 269 (394)
T ss_pred ccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceeeeccchhccccccceecccccccc-c
Confidence 9999998 78887777788999999999655 677788999999999999999887666666555 899999999998 5
Q ss_pred CCcccCCCccccccCccCC
Q 004994 227 IPEKLLSIPNFRKDGNPFN 245 (720)
Q Consensus 227 ~p~~~~~l~~l~~~~n~~~ 245 (720)
++. ++.+.+++..+...+
T Consensus 270 i~~-~~~~~~l~~L~~s~n 287 (394)
T COG4886 270 ISS-LGSLTNLRELDLSGN 287 (394)
T ss_pred ccc-ccccCccCEEeccCc
Confidence 555 666666555544443
No 470
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.00 E-value=3.1e-10 Score=106.90 Aligned_cols=81 Identities=28% Similarity=0.454 Sum_probs=21.4
Q ss_pred cCcEEEecCCcCCCCCcchhhcccccccccccccccCCCCCchh-cCCCCCceEeccCCcccccCC--CCCCCCCCCcee
Q 004994 118 TVRNFSLSGNQLTGSIPESLSRLTQLLDLSLNNNHLNGGIPDAF-HQFTGLINFDLSANNLTGQLP--PSTRNLSSLYSL 194 (720)
Q Consensus 118 ~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~l~~N~l~g~~p~~~-~~l~~L~~L~ls~N~l~g~~p--~~~~~l~~L~~L 194 (720)
+|+.|+|++|+++ .++ .+..+++|+.|++++|+|+ .+.+.+ ..+++|+.|+|++|+|.. +- ..+..+++|+.|
T Consensus 43 ~L~~L~Ls~N~I~-~l~-~l~~L~~L~~L~L~~N~I~-~i~~~l~~~lp~L~~L~L~~N~I~~-l~~l~~L~~l~~L~~L 118 (175)
T PF14580_consen 43 KLEVLDLSNNQIT-KLE-GLPGLPRLKTLDLSNNRIS-SISEGLDKNLPNLQELYLSNNKISD-LNELEPLSSLPKLRVL 118 (175)
T ss_dssp T--EEE-TTS--S---T-T----TT--EEE--SS----S-CHHHHHH-TT--EEE-TTS---S-CCCCGGGGG-TT--EE
T ss_pred CCCEEECCCCCCc-ccc-CccChhhhhhcccCCCCCC-ccccchHHhCCcCCEEECcCCcCCC-hHHhHHHHcCCCccee
Confidence 3444444444444 222 2444455555555555554 233222 234555555555555542 11 123345555555
Q ss_pred eccccccc
Q 004994 195 HLQNNKLS 202 (720)
Q Consensus 195 ~l~~N~l~ 202 (720)
+|.+|.++
T Consensus 119 ~L~~NPv~ 126 (175)
T PF14580_consen 119 SLEGNPVC 126 (175)
T ss_dssp E-TT-GGG
T ss_pred eccCCccc
Confidence 55555554
No 471
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.97 E-value=5.9e-09 Score=96.60 Aligned_cols=133 Identities=23% Similarity=0.323 Sum_probs=96.2
Q ss_pred CeeccCCCceEEEEEeCCCcEEEEEE-eccccccc-----ccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEee
Q 004994 446 NFIGEGLLGSVYKAELPGGKLLAVKK-LSNTVSQR-----QTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDY 519 (720)
Q Consensus 446 ~~lg~G~~g~Vy~~~~~~g~~vavK~-l~~~~~~~-----~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 519 (720)
..+++|+=+.+|.+.+.+.. +++|. +.+....+ -..+.-.+|++++.+++--.|..-+=|..+.+...|+|||
T Consensus 2 ~~i~~GAEa~i~~~~~~g~~-av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~ 80 (204)
T COG3642 2 DLIKQGAEAIIYLTDFLGLP-AVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEY 80 (204)
T ss_pred chhhCCcceeEEeeeccCcc-eEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEE
Confidence 45789999999999775443 55664 43332222 2234567788888888654444333344455667899999
Q ss_pred CCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCC
Q 004994 520 GGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPL 594 (720)
Q Consensus 520 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~ 594 (720)
+++-.|.+.+... +..++..+-+-+.-||.. +|||+||.++||++..+. +.++|||++.+
T Consensus 81 I~G~~lkd~l~~~-----------~~~~~r~vG~~vg~lH~~---givHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 81 IEGELLKDALEEA-----------RPDLLREVGRLVGKLHKA---GIVHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred eCChhHHHHHHhc-----------chHHHHHHHHHHHHHHhc---CeecCCCccceEEEeCCc-EEEEECCcccc
Confidence 9998888888532 245666777778889987 999999999999998775 99999999864
No 472
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=98.96 E-value=6e-11 Score=115.86 Aligned_cols=122 Identities=26% Similarity=0.401 Sum_probs=71.4
Q ss_pred ccCcEEEecCCcCCCCCcchhhcccccccccccccccCCCCCchhcCCCCCceEeccCCcccccCCCCCCCCCCCceeec
Q 004994 117 VTVRNFSLSGNQLTGSIPESLSRLTQLLDLSLNNNHLNGGIPDAFHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHL 196 (720)
Q Consensus 117 ~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l 196 (720)
..|++||||+|.++ .|.++..-++.++.|++|+|.|. .+- .+..|++|+.||||+|.|+ .+-.+-..|.+++.|.|
T Consensus 284 q~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~-~v~-nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL~L 359 (490)
T KOG1259|consen 284 QELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIR-TVQ-NLAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKTLKL 359 (490)
T ss_pred hhhhhccccccchh-hhhhhhhhccceeEEecccccee-eeh-hhhhcccceEeecccchhH-hhhhhHhhhcCEeeeeh
Confidence 35666777777776 66666666677777777777765 332 2666677777777777776 55555556666677777
Q ss_pred ccccccccccccccc-ccceEEccCCcCcccCC--cccCCCcccc---ccCccC
Q 004994 197 QNNKLSGTLNVLEDL-HLIDLNIENNLFSGPIP--EKLLSIPNFR---KDGNPF 244 (720)
Q Consensus 197 ~~N~l~~~~~~~~~~-~l~~l~l~~N~l~g~~p--~~~~~l~~l~---~~~n~~ 244 (720)
+.|.+...- .+..+ +|..||+++|++.. +- ..+++++-|. +.+||.
T Consensus 360 a~N~iE~LS-GL~KLYSLvnLDl~~N~Ie~-ldeV~~IG~LPCLE~l~L~~NPl 411 (490)
T KOG1259|consen 360 AQNKIETLS-GLRKLYSLVNLDLSSNQIEE-LDEVNHIGNLPCLETLRLTGNPL 411 (490)
T ss_pred hhhhHhhhh-hhHhhhhheeccccccchhh-HHHhcccccccHHHHHhhcCCCc
Confidence 777653221 12222 36667777776652 21 2344554433 445554
No 473
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=98.95 E-value=9.2e-11 Score=114.60 Aligned_cols=136 Identities=26% Similarity=0.373 Sum_probs=97.2
Q ss_pred cccCCcCcCCCCCccEEeccCCcccccCCCCcc--ccCcEEEecCCcCCCCCcchhhcccccccccccccccCCCCCchh
Q 004994 84 GGVLADTLGDLESVINIDLSNNHIGGSIPSNLP--VTVRNFSLSGNQLTGSIPESLSRLTQLLDLSLNNNHLNGGIPDAF 161 (720)
Q Consensus 84 ~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~--~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~l~~N~l~g~~p~~~ 161 (720)
.|..-..+.....|+.||||+|.|+ .+-.+.. +.++.|+||+|.+. .+-. +..|++|+.||||+|.|+ .+-..-
T Consensus 273 ~G~~~~~~dTWq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~-~v~n-La~L~~L~~LDLS~N~Ls-~~~Gwh 348 (490)
T KOG1259|consen 273 NGSALVSADTWQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIR-TVQN-LAELPQLQLLDLSGNLLA-ECVGWH 348 (490)
T ss_pred CCceEEecchHhhhhhccccccchh-hhhhhhhhccceeEEecccccee-eehh-hhhcccceEeecccchhH-hhhhhH
Confidence 3444444555667888888888887 5655543 67888888888887 4443 788888888888888887 444444
Q ss_pred cCCCCCceEeccCCcccccCCCCCCCCCCCceeeccccccccc--cccccccc-cceEEccCCcCcc
Q 004994 162 HQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNNKLSGT--LNVLEDLH-LIDLNIENNLFSG 225 (720)
Q Consensus 162 ~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~--~~~~~~~~-l~~l~l~~N~l~g 225 (720)
..|.+++.|.|+.|.|. .+. .+..|-+|..||+++|++... ...++.+. |+.+.|.+|.+.+
T Consensus 349 ~KLGNIKtL~La~N~iE-~LS-GL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~ 413 (490)
T KOG1259|consen 349 LKLGNIKTLKLAQNKIE-TLS-GLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAG 413 (490)
T ss_pred hhhcCEeeeehhhhhHh-hhh-hhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccc
Confidence 56777888888888886 332 467778888888888888643 34566666 7888888888884
No 474
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=98.89 E-value=6.9e-10 Score=125.59 Aligned_cols=246 Identities=18% Similarity=0.151 Sum_probs=152.9
Q ss_pred CCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccc-cccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEee
Q 004994 442 FSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTV-SQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDY 519 (720)
Q Consensus 442 ~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~-~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 519 (720)
+...+-+.+|.++.++-+.- ..|...++|+....- ......+....+-.++-.-+||-++....-+......++|++|
T Consensus 806 ~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L~~~~ 885 (1205)
T KOG0606|consen 806 FEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPLVGHY 885 (1205)
T ss_pred ceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcchhhHH
Confidence 34445566777887776633 234445555543211 1111122222222222223456666554444556678999999
Q ss_pred CCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCC-
Q 004994 520 GGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSG- 598 (720)
Q Consensus 520 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~- 598 (720)
..+++|...++... ..+..........+.++++|||.. .++|||++|.|+|...+++.+++|||........
T Consensus 886 ~~~~~~~Skl~~~~----~~saepaRs~i~~~vqs~e~L~s~---~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~ 958 (1205)
T KOG0606|consen 886 LNGGDLPSKLHNSG----CLSAEPARSPILERVQSLESLHSS---LRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIP 958 (1205)
T ss_pred hccCCchhhhhcCC----CcccccccchhHHHHhhhhccccc---hhhcccccccchhhcccCCcccCcccccccccccc
Confidence 99999999887543 112112223344566889999986 6899999999999999999999999843322100
Q ss_pred --------------------C--------CcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCC
Q 004994 599 --------------------S--------TNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRS 649 (720)
Q Consensus 599 --------------------~--------~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~ 649 (720)
. .........++..|.+||.. +..-...+|+|++|++++|.++|..||...
T Consensus 959 p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~ 1038 (1205)
T KOG0606|consen 959 PTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAE 1038 (1205)
T ss_pred CcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCc
Confidence 0 00112235578899999988 445678899999999999999999999876
Q ss_pred CCccc-cchhhhcccccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHH
Q 004994 650 RPRGE-QSLVRWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMS 710 (720)
Q Consensus 650 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ 710 (720)
.+... .++.....+.. ..+.+...++.+++.+.+..+|.+|-.|.
T Consensus 1039 tpq~~f~ni~~~~~~~p----------------~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1039 TPQQIFENILNRDIPWP----------------EGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred chhhhhhccccCCCCCC----------------CCccccChhhhhhhhhhhccCchhccCcc
Confidence 54332 11111111100 01122335667889999999999997665
No 475
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=98.88 E-value=7.8e-10 Score=104.21 Aligned_cols=104 Identities=34% Similarity=0.499 Sum_probs=40.5
Q ss_pred ccCcEEEecCCcCCCCCcchhh-cccccccccccccccCCCCCchhcCCCCCceEeccCCcccccCCCCC-CCCCCCcee
Q 004994 117 VTVRNFSLSGNQLTGSIPESLS-RLTQLLDLSLNNNHLNGGIPDAFHQFTGLINFDLSANNLTGQLPPST-RNLSSLYSL 194 (720)
Q Consensus 117 ~~L~~L~Ls~N~l~g~~p~~l~-~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~-~~l~~L~~L 194 (720)
.++++|+|++|+|+ .|. .++ .+.+|+.|+|++|.|+ .++ .+..++.|+.|++++|+|+ .+...+ ..+++|+.|
T Consensus 19 ~~~~~L~L~~n~I~-~Ie-~L~~~l~~L~~L~Ls~N~I~-~l~-~l~~L~~L~~L~L~~N~I~-~i~~~l~~~lp~L~~L 93 (175)
T PF14580_consen 19 VKLRELNLRGNQIS-TIE-NLGATLDKLEVLDLSNNQIT-KLE-GLPGLPRLKTLDLSNNRIS-SISEGLDKNLPNLQEL 93 (175)
T ss_dssp -------------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS----S-CHHHHHH-TT--EE
T ss_pred cccccccccccccc-ccc-chhhhhcCCCEEECCCCCCc-ccc-CccChhhhhhcccCCCCCC-ccccchHHhCCcCCEE
Confidence 45778888888887 553 566 5889999999999998 454 5888999999999999998 565544 468999999
Q ss_pred eccccccccc--cccccccc-cceEEccCCcCcc
Q 004994 195 HLQNNKLSGT--LNVLEDLH-LIDLNIENNLFSG 225 (720)
Q Consensus 195 ~l~~N~l~~~--~~~~~~~~-l~~l~l~~N~l~g 225 (720)
+|++|+|... +..+..++ |+.|+|.+|.++.
T Consensus 94 ~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~ 127 (175)
T PF14580_consen 94 YLSNNKISDLNELEPLSSLPKLRVLSLEGNPVCE 127 (175)
T ss_dssp E-TTS---SCCCCGGGGG-TT--EEE-TT-GGGG
T ss_pred ECcCCcCCChHHhHHHHcCCCcceeeccCCcccc
Confidence 9999999754 34455554 8999999998873
No 476
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=98.86 E-value=3.2e-10 Score=115.02 Aligned_cols=146 Identities=27% Similarity=0.382 Sum_probs=113.9
Q ss_pred eccCCcccccCCCCccccCcEEEecCCcCCCCCcchhhcccccccccccccccCCCCCchhcCCCCCceEec-cCCcccc
Q 004994 101 DLSNNHIGGSIPSNLPVTVRNFSLSGNQLTGSIPESLSRLTQLLDLSLNNNHLNGGIPDAFHQFTGLINFDL-SANNLTG 179 (720)
Q Consensus 101 ~L~~N~l~g~ip~~~~~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l-s~N~l~g 179 (720)
|-++-.|+ .||..+|.....|+|..|+|+...|.+|+.+++|+.|||++|+|+-.-|++|.+|.+|..|-+ ++|+|+.
T Consensus 52 dCr~~GL~-eVP~~LP~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~ 130 (498)
T KOG4237|consen 52 DCRGKGLT-EVPANLPPETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITD 130 (498)
T ss_pred EccCCCcc-cCcccCCCcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhh
Confidence 44444555 899999999999999999999777788999999999999999999888999999998887755 5599994
Q ss_pred cCCCCCCCCCCCceeecccccccccc-ccccccc-cceEEccCCcCcccCCc-ccCCCcccc---ccCccCCCcc
Q 004994 180 QLPPSTRNLSSLYSLHLQNNKLSGTL-NVLEDLH-LIDLNIENNLFSGPIPE-KLLSIPNFR---KDGNPFNTTV 248 (720)
Q Consensus 180 ~~p~~~~~l~~L~~L~l~~N~l~~~~-~~~~~~~-l~~l~l~~N~l~g~~p~-~~~~l~~l~---~~~n~~~~~~ 248 (720)
.....|++|.+|+.|.+.-|++.-.. ..+..+. +..|.+-.|.+. .|+. .+..+..++ +.-|++-|.|
T Consensus 131 l~k~~F~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q-~i~~~tf~~l~~i~tlhlA~np~icdC 204 (498)
T KOG4237|consen 131 LPKGAFGGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQ-SICKGTFQGLAAIKTLHLAQNPFICDC 204 (498)
T ss_pred hhhhHhhhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhh-hhccccccchhccchHhhhcCcccccc
Confidence 44467899999999999999998776 3455555 777888888887 5665 555554444 4455554444
No 477
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.83 E-value=7.4e-08 Score=98.04 Aligned_cols=144 Identities=15% Similarity=0.062 Sum_probs=101.1
Q ss_pred CCeeccCCCceEEEEEeCCCcEEEEEEeccccccc---------ccHHHHHHHHHHHHccCCC--ceeEEEeEecc----
Q 004994 445 GNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQR---------QTDEEFLELASTISRLRHG--NIVELIGYCNE---- 509 (720)
Q Consensus 445 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~---------~~~~~~~~e~~~l~~l~H~--niv~l~~~~~~---- 509 (720)
++.+-+-....|+++.+ +|+.|.||+........ .....+.+|.+.+.++... .++..+++...
T Consensus 27 ~e~v~~~~~rrvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~ 105 (268)
T PRK15123 27 GEVFRELEGRRTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNP 105 (268)
T ss_pred CcEEecCCCceEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCC
Confidence 45666666667888766 57789999874322110 1112477888888777433 33344555432
Q ss_pred -CCeEEEEEeeCCCC-CHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcC-------
Q 004994 510 -HGQHLLVYDYGGNC-TLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDE------- 580 (720)
Q Consensus 510 -~~~~~lv~e~~~~g-sL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~------- 580 (720)
...-++|||++++. +|.+++.... ....+...+..++.++++.+.-||.. ||+|+|++++|||++.
T Consensus 106 ~~~~s~LVte~l~~~~sL~~~~~~~~--~~~~~~~~~~~ll~~la~~i~~LH~~---Gi~HgDL~~~NiLl~~~~~~~~~ 180 (268)
T PRK15123 106 ATRTSFIITEDLAPTISLEDYCADWA--TNPPDPRLKRMLIKRVATMVRDMHAA---GINHRDCYICHFLLHLPFPGREE 180 (268)
T ss_pred ccceeEEEEeeCCCCccHHHHHHhhc--ccCCCHHHHHHHHHHHHHHHHHHHHC---cCccCCCChhhEEEeccccCCCC
Confidence 23578999999986 7988874211 12344556778999999999999998 9999999999999985
Q ss_pred CCCeEEccccCCCC
Q 004994 581 KLIVRVSDCGLAPL 594 (720)
Q Consensus 581 ~~~~kl~DFGla~~ 594 (720)
+..+.++||+.+..
T Consensus 181 ~~~~~LIDl~r~~~ 194 (268)
T PRK15123 181 DLKLSVIDLHRAQI 194 (268)
T ss_pred CceEEEEECCcccc
Confidence 46899999998753
No 478
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.82 E-value=9.3e-08 Score=101.05 Aligned_cols=218 Identities=21% Similarity=0.278 Sum_probs=147.7
Q ss_pred CCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEec----cCCeEEEEEeeCCC-CCH
Q 004994 452 LLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCN----EHGQHLLVYDYGGN-CTL 525 (720)
Q Consensus 452 ~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~----~~~~~~lv~e~~~~-gsL 525 (720)
-..+.||+.. .||..|++|++..... ........-+++.+++.|.|||++.+++. ....+++||+|.++ ++|
T Consensus 288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~--~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL 365 (655)
T KOG3741|consen 288 FSITTYKATSNVDGNAYVLKRLHGDRD--QSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTL 365 (655)
T ss_pred ccceeEeeeeccCCceeeeeeeccccc--cCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchH
Confidence 3457899954 5899999999953322 22223445678899999999999999875 34478999999876 567
Q ss_pred HHHhhccc-----------hhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCC
Q 004994 526 HDLLHSDE-----------EAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPL 594 (720)
Q Consensus 526 ~~~l~~~~-----------~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~ 594 (720)
.++.-... ......++...+.++.|+..||.++|+. |+.-+-|.+.+||++.+.+++|+..|+...
T Consensus 366 ~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHss---GLAck~L~~~kIlv~G~~RIriS~C~i~Dv 442 (655)
T KOG3741|consen 366 YDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSS---GLACKTLDLKKILVTGKMRIRISGCGIMDV 442 (655)
T ss_pred HHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhc---CceeecccHhHeEeeCcceEEEecccceee
Confidence 76643211 1123456678889999999999999998 888899999999999999999998888766
Q ss_pred CCCCCCcccccCccccccCCCCccCCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhh
Q 004994 595 LFSGSTNELSEGLLTAHGSGAPEFESGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRM 674 (720)
Q Consensus 595 ~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (720)
+..... +| + +--.+-|.=.||.+++.|.||..--...+.. + ...+.+
T Consensus 443 l~~d~~--------------~~--l--e~~Qq~D~~~lG~ll~aLAt~~~ns~~~d~~--~------------~s~~~~- 489 (655)
T KOG3741|consen 443 LQEDPT--------------EP--L--ESQQQNDLRDLGLLLLALATGTENSNRTDST--Q------------SSHLTR- 489 (655)
T ss_pred ecCCCC--------------cc--h--hHHhhhhHHHHHHHHHHHhhcccccccccch--H------------HHHHHH-
Confidence 543220 00 1 1123678889999999999996321110000 0 000111
Q ss_pred cCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q 004994 675 VDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDL 716 (720)
Q Consensus 675 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L 716 (720)
.......++++++.-.....+.+ -+..+++.++
T Consensus 490 --------I~~~yS~D~rn~v~yl~s~~~~~-ksI~~llp~~ 522 (655)
T KOG3741|consen 490 --------ITTTYSTDLRNVVEYLESLNFRE-KSIQDLLPMI 522 (655)
T ss_pred --------hhhhhhHHHHHHHHHHHhcCccc-ccHHHHHHHH
Confidence 01123346677777777777776 5667766554
No 479
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=98.80 E-value=1.4e-09 Score=111.94 Aligned_cols=159 Identities=22% Similarity=0.220 Sum_probs=120.0
Q ss_pred eeEeecCceeEEEecCCcccccC--CcCcCCCCCccEEeccCCcccccCCCCcc---ccCcEEEecCCcCCCC-Ccchhh
Q 004994 65 GVFCVFSNVTEIRLTGMNLGGVL--ADTLGDLESVINIDLSNNHIGGSIPSNLP---VTVRNFSLSGNQLTGS-IPESLS 138 (720)
Q Consensus 65 gv~c~~~~l~~l~L~~n~l~~~~--~~~~~~l~~L~~L~L~~N~l~g~ip~~~~---~~L~~L~Ls~N~l~g~-~p~~l~ 138 (720)
++.-.+++++.|||+.|-|.... -.....|++|+.|+|+.|++.-...+... ..|+.|.|+.+.|+-. +-.-+.
T Consensus 140 ~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~~lK~L~l~~CGls~k~V~~~~~ 219 (505)
T KOG3207|consen 140 EYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLSHLKQLVLNSCGLSWKDVQWILL 219 (505)
T ss_pred hhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhhhhheEEeccCCCCHHHHHHHHH
Confidence 46666789999999999887543 34567899999999999999733333332 6899999999999821 112245
Q ss_pred cccccccccccccccCCCCCchhcCCCCCceEeccCCcccccCC--CCCCCCCCCceeecccccccccc-ccc------c
Q 004994 139 RLTQLLDLSLNNNHLNGGIPDAFHQFTGLINFDLSANNLTGQLP--PSTRNLSSLYSLHLQNNKLSGTL-NVL------E 209 (720)
Q Consensus 139 ~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p--~~~~~l~~L~~L~l~~N~l~~~~-~~~------~ 209 (720)
.+++|+.|+|..|..-+.--.....+..|+.|||++|++- .++ ...+.++.|..|+++.+.+...- +.. .
T Consensus 220 ~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li-~~~~~~~~~~l~~L~~Lnls~tgi~si~~~d~~s~~kt~ 298 (505)
T KOG3207|consen 220 TFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLI-DFDQGYKVGTLPGLNQLNLSSTGIASIAEPDVESLDKTH 298 (505)
T ss_pred hCCcHHHhhhhcccccceecchhhhhhHHhhccccCCccc-ccccccccccccchhhhhccccCcchhcCCCccchhhhc
Confidence 6799999999999643344445567789999999999997 566 56788999999999999987542 221 2
Q ss_pred c-cccceEEccCCcCc
Q 004994 210 D-LHLIDLNIENNLFS 224 (720)
Q Consensus 210 ~-~~l~~l~l~~N~l~ 224 (720)
. .+|+.|+++.|++.
T Consensus 299 ~f~kL~~L~i~~N~I~ 314 (505)
T KOG3207|consen 299 TFPKLEYLNISENNIR 314 (505)
T ss_pred ccccceeeecccCccc
Confidence 2 24999999999996
No 480
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.76 E-value=4.1e-09 Score=81.57 Aligned_cols=59 Identities=42% Similarity=0.585 Sum_probs=29.6
Q ss_pred cCcEEEecCCcCCCCCcchhhcccccccccccccccCCCCCchhcCCCCCceEeccCCc
Q 004994 118 TVRNFSLSGNQLTGSIPESLSRLTQLLDLSLNNNHLNGGIPDAFHQFTGLINFDLSANN 176 (720)
Q Consensus 118 ~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~ 176 (720)
+|+.|+|++|+|+...+..|.++++|++|++++|+++...|..|.++++|++|++++|+
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 34445555555553333445555555555555555554444445555555555555554
No 481
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.75 E-value=8.8e-08 Score=88.36 Aligned_cols=145 Identities=19% Similarity=0.199 Sum_probs=99.0
Q ss_pred CCCeeccCCCceEEEEEeCCCcEEEEEE-eccccc-----ccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEE
Q 004994 444 EGNFIGEGLLGSVYKAELPGGKLLAVKK-LSNTVS-----QRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVY 517 (720)
Q Consensus 444 ~~~~lg~G~~g~Vy~~~~~~g~~vavK~-l~~~~~-----~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 517 (720)
...++-+|+-+.|+++.+. |+.+.||. +.+... .+-..+.-..|++.+.+++--.|..-.=++.+...-.++|
T Consensus 11 ~l~likQGAEArv~~~~~~-Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~M 89 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFS-GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYM 89 (229)
T ss_pred cceeeeccceeeEeeeccC-CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEE
Confidence 4578899999999999874 55655654 433321 2223456678888888886545444333444445566999
Q ss_pred eeCCC-CCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCC---CeEEccccCCC
Q 004994 518 DYGGN-CTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKL---IVRVSDCGLAP 593 (720)
Q Consensus 518 e~~~~-gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~---~~kl~DFGla~ 593 (720)
||.++ -++.+++..... ...........+..+-+.+.-||.. +|||+||..+||++..++ .+.++|||++.
T Consensus 90 E~~~g~~~vk~~i~~~~~--~~~~d~~~~~~~~~iG~~igklH~n---diiHGDLTTSNill~~~~~~~~~~lIdfgls~ 164 (229)
T KOG3087|consen 90 EFIDGASTVKDFILSTME--DESEDEGLAELARRIGELIGKLHDN---DIIHGDLTTSNILLRSDGNQITPILIDFGLSS 164 (229)
T ss_pred EeccchhHHHHHHHHHcc--CcccchhHHHHHHHHHHHHHHhhhC---CeecccccccceEEecCCCcCceEEEeecchh
Confidence 99987 356776653211 1122223356788888999999987 899999999999996655 45899999975
Q ss_pred C
Q 004994 594 L 594 (720)
Q Consensus 594 ~ 594 (720)
.
T Consensus 165 ~ 165 (229)
T KOG3087|consen 165 V 165 (229)
T ss_pred c
Confidence 3
No 482
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.74 E-value=5.3e-09 Score=80.94 Aligned_cols=61 Identities=43% Similarity=0.551 Sum_probs=54.5
Q ss_pred cccccccccccccCCCCCchhcCCCCCceEeccCCcccccCCCCCCCCCCCceeecccccc
Q 004994 141 TQLLDLSLNNNHLNGGIPDAFHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNNKL 201 (720)
Q Consensus 141 ~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l 201 (720)
++|+.|+|++|+|+...+..|.++++|++|++++|+|+...|..|.++++|+.|++++|+|
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 5789999999999966667899999999999999999977778899999999999999975
No 483
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.72 E-value=7e-08 Score=92.54 Aligned_cols=127 Identities=25% Similarity=0.282 Sum_probs=81.0
Q ss_pred eEEEEEeCCCcEEEEEEeccccc------------cc------------ccHHHHHHHHHHHHccCCC--ceeEEEeEec
Q 004994 455 SVYKAELPGGKLLAVKKLSNTVS------------QR------------QTDEEFLELASTISRLRHG--NIVELIGYCN 508 (720)
Q Consensus 455 ~Vy~~~~~~g~~vavK~l~~~~~------------~~------------~~~~~~~~e~~~l~~l~H~--niv~l~~~~~ 508 (720)
.||.|...+|..+|||..+.... .+ .......+|.+.|.++..- ++.+.+++.
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~- 79 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence 48999888999999998753210 00 1124567899999999766 567777653
Q ss_pred cCCeEEEEEeeCC--CCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHH-HhcCCCCeeecCCCCCCeEEcCCCCeE
Q 004994 509 EHGQHLLVYDYGG--NCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYL-QEVCEPPIVHGNFKSSNILLDEKLIVR 585 (720)
Q Consensus 509 ~~~~~~lv~e~~~--~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~L-H~~~~~~ivHrDlkp~NiLl~~~~~~k 585 (720)
..++||||++ +..+..+.... ++......+..++.+.+..+ |.. +|||+||.+.|||++++ .+.
T Consensus 80 ---~~~ivME~I~~~G~~~~~l~~~~------~~~~~~~~~~~~il~~~~~~~~~~---givHGDLs~~NIlv~~~-~~~ 146 (188)
T PF01163_consen 80 ---RNVIVMEYIGEDGVPLPRLKDVD------LSPEEPKELLEEILEEIIKMLHKA---GIVHGDLSEYNILVDDG-KVY 146 (188)
T ss_dssp ---TTEEEEE--EETTEEGGCHHHCG------GGGSTHHHHHHHHHHHHHHHHHCT---TEEESS-STTSEEEETT-CEE
T ss_pred ---CCEEEEEecCCCccchhhHHhcc------ccchhHHHHHHHHHHHHHHHHHhc---CceecCCChhhEEeecc-eEE
Confidence 3479999998 54454433211 11223445666676755554 454 99999999999999988 999
Q ss_pred EccccCCCCC
Q 004994 586 VSDCGLAPLL 595 (720)
Q Consensus 586 l~DFGla~~~ 595 (720)
|+|||.|...
T Consensus 147 iIDf~qav~~ 156 (188)
T PF01163_consen 147 IIDFGQAVDS 156 (188)
T ss_dssp E--GTTEEET
T ss_pred EEecCcceec
Confidence 9999987543
No 484
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.62 E-value=1.3e-09 Score=94.95 Aligned_cols=108 Identities=24% Similarity=0.351 Sum_probs=73.7
Q ss_pred eeEEEecCCcccccCCc---CcCCCCCccEEeccCCcccccCCCCcc---ccCcEEEecCCcCCCCCcchhhcccccccc
Q 004994 73 VTEIRLTGMNLGGVLAD---TLGDLESVINIDLSNNHIGGSIPSNLP---VTVRNFSLSGNQLTGSIPESLSRLTQLLDL 146 (720)
Q Consensus 73 l~~l~L~~n~l~~~~~~---~~~~l~~L~~L~L~~N~l~g~ip~~~~---~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L 146 (720)
+..++|+++.|- .+++ .+.....|+..+|++|.|. ..|..|. +.++.|+|++|.|+ .+|.++..++.|+.|
T Consensus 29 ~h~ldLssc~lm-~i~davy~l~~~~el~~i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~l 105 (177)
T KOG4579|consen 29 LHFLDLSSCQLM-YIADAVYMLSKGYELTKISLSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSL 105 (177)
T ss_pred hhhcccccchhh-HHHHHHHHHhCCceEEEEecccchhh-hCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhc
Confidence 455677777765 2333 3445566777788888887 6666654 36777777777777 677777777777777
Q ss_pred cccccccCCCCCchhcCCCCCceEeccCCcccccCCCCC
Q 004994 147 SLNNNHLNGGIPDAFHQFTGLINFDLSANNLTGQLPPST 185 (720)
Q Consensus 147 ~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~ 185 (720)
+++.|.|. ..|..+..|.+|-.||..+|.+. .+|..+
T Consensus 106 Nl~~N~l~-~~p~vi~~L~~l~~Lds~~na~~-eid~dl 142 (177)
T KOG4579|consen 106 NLRFNPLN-AEPRVIAPLIKLDMLDSPENARA-EIDVDL 142 (177)
T ss_pred ccccCccc-cchHHHHHHHhHHHhcCCCCccc-cCcHHH
Confidence 77777776 56666666777777777777775 566543
No 485
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.56 E-value=6e-09 Score=113.23 Aligned_cols=55 Identities=27% Similarity=0.297 Sum_probs=28.8
Q ss_pred CCCHHHHHHHHHHHHhcCCC----CCCCccCCCCCCCCCCCceeEeecCceeEEEecCCccc
Q 004994 27 VTDPRDVMALNSLYISLNFP----PLEKWLSFGGDPCGDSWQGVFCVFSNVTEIRLTGMNLG 84 (720)
Q Consensus 27 ~~~~~~~~al~~~~~~l~~~----~~~~w~~~~~~~c~~~w~gv~c~~~~l~~l~L~~n~l~ 84 (720)
.-++.|..++.+++.-++.- .+..--..+.||-. .- ..--+..|+.|.|.++.|+
T Consensus 64 ~s~~ads~vl~qLq~i~d~lqkt~~lkl~~~pa~~pt~--pi-~ifpF~sLr~LElrg~~L~ 122 (1096)
T KOG1859|consen 64 VSDNADSRVLEQLQRILDFLQKTKVLKLLPSPARDPTE--PI-SIFPFRSLRVLELRGCDLS 122 (1096)
T ss_pred cCCcccchHHHHHHHHHHHHhhheeeeecccCCCCCCC--Cc-eeccccceeeEEecCcchh
Confidence 45677888888877544321 12111112334331 11 1123567888888888775
No 486
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.47 E-value=3.5e-08 Score=108.15 Aligned_cols=124 Identities=28% Similarity=0.367 Sum_probs=58.6
Q ss_pred ceeEEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCC--CccccCcEEEecCCcCCCCCcchhhccccccccccc
Q 004994 72 NVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPS--NLPVTVRNFSLSGNQLTGSIPESLSRLTQLLDLSLN 149 (720)
Q Consensus 72 ~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~--~~~~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~l~ 149 (720)
.+..++|..|.+.- +-..+..+++|..|+|.+|+|. .+.. .-..+|+.|+|++|+|+...+ +..++.|+.|+++
T Consensus 73 ~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~-~i~~~l~~~~~L~~L~ls~N~I~~i~~--l~~l~~L~~L~l~ 148 (414)
T KOG0531|consen 73 SLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIE-KIENLLSSLVNLQVLDLSFNKITKLEG--LSTLTLLKELNLS 148 (414)
T ss_pred hHHhhccchhhhhh-hhcccccccceeeeeccccchh-hcccchhhhhcchheeccccccccccc--hhhccchhhheec
Confidence 34444455555442 2233455555555555555555 2222 112455555555555553222 4444555555555
Q ss_pred ccccCCCCCchhcCCCCCceEeccCCcccccCCCC-CCCCCCCceeeccccccc
Q 004994 150 NNHLNGGIPDAFHQFTGLINFDLSANNLTGQLPPS-TRNLSSLYSLHLQNNKLS 202 (720)
Q Consensus 150 ~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~-~~~l~~L~~L~l~~N~l~ 202 (720)
+|.|+. +. .+..+..|+.+++++|.++ .+... ...+.+|+.+++.+|.+.
T Consensus 149 ~N~i~~-~~-~~~~l~~L~~l~l~~n~i~-~ie~~~~~~~~~l~~l~l~~n~i~ 199 (414)
T KOG0531|consen 149 GNLISD-IS-GLESLKSLKLLDLSYNRIV-DIENDELSELISLEELDLGGNSIR 199 (414)
T ss_pred cCcchh-cc-CCccchhhhcccCCcchhh-hhhhhhhhhccchHHHhccCCchh
Confidence 555542 21 2333555555555555555 23221 344555555555555543
No 487
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.47 E-value=6.8e-08 Score=105.86 Aligned_cols=150 Identities=19% Similarity=0.234 Sum_probs=101.7
Q ss_pred HHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCCCcc-------cccCccccccCCCCccCCC
Q 004994 549 LGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNE-------LSEGLLTAHGSGAPEFESG 621 (720)
Q Consensus 549 ~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~~-------~~~~~~~~~~~~aPE~~~~ 621 (720)
.+++.|+.|+|.. .++||++|.|++|.++..+..||+.|+.+.......... ..........|.|||++.+
T Consensus 106 ~~v~dgl~flh~s--Ak~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~ 183 (700)
T KOG2137|consen 106 GNVADGLAFLHRS--AKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLG 183 (700)
T ss_pred hcccchhhhhccC--cceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcc
Confidence 3455899999985 589999999999999999999999999875443211111 1111223456899999854
Q ss_pred -CCCCccchHhHHHHHHHHH-hCCCCCCCCCCccccchhhhcccccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHh
Q 004994 622 -SYSCQSDVYSLGVVMLELL-TGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCV 699 (720)
Q Consensus 622 -~~~~~~Dv~S~Gvvl~ell-tG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl 699 (720)
..+.++|+||+||++|.+. .|+.-+..........+ ....+..-...+....++++++=+.+.+
T Consensus 184 ~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~--------------~~~~~~~~~~~~s~~~p~el~~~l~k~l 249 (700)
T KOG2137|consen 184 TTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSF--------------SRNLLNAGAFGYSNNLPSELRESLKKLL 249 (700)
T ss_pred ccccccccceeeeeEEEEEecCCcchhhccCCcchhhh--------------hhcccccccccccccCcHHHHHHHHHHh
Confidence 4688999999999999999 45554443322111111 1111111111223456678899999999
Q ss_pred ccCCCCCCCHHHHHH
Q 004994 700 QWEPGFRPPMSEIVQ 714 (720)
Q Consensus 700 ~~dP~~RPt~~evl~ 714 (720)
..++..||++.++..
T Consensus 250 ~~~~~~rp~~~~l~~ 264 (700)
T KOG2137|consen 250 NGDSAVRPTLDLLLS 264 (700)
T ss_pred cCCcccCcchhhhhc
Confidence 999999998877653
No 488
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.45 E-value=1.4e-06 Score=85.99 Aligned_cols=137 Identities=23% Similarity=0.164 Sum_probs=94.0
Q ss_pred CCCCCeeccCCCceEEEEEeCCCcEEEEEEecccccc--------------------cccHHHHHHHHHHHHccCCC--c
Q 004994 442 FSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQ--------------------RQTDEEFLELASTISRLRHG--N 499 (720)
Q Consensus 442 ~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~--------------------~~~~~~~~~e~~~l~~l~H~--n 499 (720)
...+..||.|.=+.||.|..+.|..+|||.-+..... ........+|.++|.+|.-. .
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~ 172 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVK 172 (304)
T ss_pred HhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCC
Confidence 4457899999999999999989999999975422110 01234567889999988654 6
Q ss_pred eeEEEeEeccCCeEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEc
Q 004994 500 IVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLD 579 (720)
Q Consensus 500 iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~ 579 (720)
|.+.+++ +...+||||+++-.|...-- +....-.|+..|.+-+.-+-.. ||||+|+.+-||+++
T Consensus 173 VP~P~~~----nRHaVvMe~ieG~eL~~~r~---------~~en~~~il~~il~~~~~~~~~---GiVHGDlSefNIlV~ 236 (304)
T COG0478 173 VPKPIAW----NRHAVVMEYIEGVELYRLRL---------DVENPDEILDKILEEVRKAYRR---GIVHGDLSEFNILVT 236 (304)
T ss_pred CCCcccc----ccceeeeehcccceeecccC---------cccCHHHHHHHHHHHHHHHHHc---CccccCCchheEEEe
Confidence 6666654 46789999999866654321 0111112222233323322233 899999999999999
Q ss_pred CCCCeEEccccCCCC
Q 004994 580 EKLIVRVSDCGLAPL 594 (720)
Q Consensus 580 ~~~~~kl~DFGla~~ 594 (720)
+||.+.++||--+..
T Consensus 237 ~dg~~~vIDwPQ~v~ 251 (304)
T COG0478 237 EDGDIVVIDWPQAVP 251 (304)
T ss_pred cCCCEEEEeCccccc
Confidence 999999999976643
No 489
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.43 E-value=3.5e-06 Score=87.11 Aligned_cols=260 Identities=16% Similarity=0.193 Sum_probs=149.9
Q ss_pred CCeeccCCCceEEEE-EeCCCcEEEEEEecccccccccHHHHHHHHHHHHcc-CCCceeEEEeEe------ccCC-eEEE
Q 004994 445 GNFIGEGLLGSVYKA-ELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRL-RHGNIVELIGYC------NEHG-QHLL 515 (720)
Q Consensus 445 ~~~lg~G~~g~Vy~~-~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~------~~~~-~~~l 515 (720)
++-||+|+-+.+|-. ...+ .+.|+....-... ..+ .++.|... .||-+-.=+.+= .+.+ ..-+
T Consensus 16 gr~LgqGgea~ly~l~e~~d---~VAKIYh~Pppa~--~aq---k~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGf 87 (637)
T COG4248 16 GRPLGQGGEADLYTLGEVRD---QVAKIYHAPPPAA--QAQ---KVAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGF 87 (637)
T ss_pred CccccCCccceeeecchhhc---hhheeecCCCchH--HHH---HHHHhccCCCCcchhhhhcccHHHhhCCCccceeEE
Confidence 466999999999975 3222 3456665332111 111 12223332 565433211111 1222 2456
Q ss_pred EEeeCCCC-CHHHHhhc--cchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCC
Q 004994 516 VYDYGGNC-TLHDLLHS--DEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLA 592 (720)
Q Consensus 516 v~e~~~~g-sL~~~l~~--~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla 592 (720)
+|..+++. -..+++.- .........|...++++..+|.+-+-||.. |.+-+|+.++|+|+.+++.+.|.|-..-
T Consensus 88 lmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~---Gh~vGDVn~~~~lVsd~~~V~LVdsDsf 164 (637)
T COG4248 88 LMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEH---GHVVGDVNQNSFLVSDDSKVVLVDSDSF 164 (637)
T ss_pred ecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhc---CCcccccCccceeeecCceEEEEcccce
Confidence 77766553 23333321 123345679999999999999999999987 8899999999999999999999884321
Q ss_pred CCCCCCCCcccccCccccccCCCCccCC-C-----CCCCccchHhHHHHHHHHHhC-CCCCCCCCCcc-cc--chhhhcc
Q 004994 593 PLLFSGSTNELSEGLLTAHGSGAPEFES-G-----SYSCQSDVYSLGVVMLELLTG-RKPYDRSRPRG-EQ--SLVRWAI 662 (720)
Q Consensus 593 ~~~~~~~~~~~~~~~~~~~~~~aPE~~~-~-----~~~~~~Dv~S~Gvvl~elltG-~~Pf~~~~~~~-~~--~~~~~~~ 662 (720)
... .......+-.+...|.+||... + .-+...|.|.+||++++++.| +.||.+..... +. .......
T Consensus 165 qi~---~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~ 241 (637)
T COG4248 165 QIN---ANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAH 241 (637)
T ss_pred eec---cCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhc
Confidence 111 2222333456778899999763 2 346789999999999999986 99997532111 00 0001111
Q ss_pred cccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccC--CCCCCCHHHHHHHHHh
Q 004994 663 PRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWE--PGFRPPMSEIVQDLLC 718 (720)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~d--P~~RPt~~evl~~L~~ 718 (720)
..+.+......-..+.....-..-.++.+..+..+|.... +.-|||++..+..|-+
T Consensus 242 g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~a 299 (637)
T COG4248 242 GRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDA 299 (637)
T ss_pred ceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHH
Confidence 1111111100000000000111223456777888888754 5689999987766543
No 490
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.42 E-value=1e-08 Score=89.35 Aligned_cols=106 Identities=22% Similarity=0.293 Sum_probs=83.0
Q ss_pred CccEEeccCCcccccCCCCcc-----ccCcEEEecCCcCCCCCcchhhc-ccccccccccccccCCCCCchhcCCCCCce
Q 004994 96 SVINIDLSNNHIGGSIPSNLP-----VTVRNFSLSGNQLTGSIPESLSR-LTQLLDLSLNNNHLNGGIPDAFHQFTGLIN 169 (720)
Q Consensus 96 ~L~~L~L~~N~l~g~ip~~~~-----~~L~~L~Ls~N~l~g~~p~~l~~-l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~ 169 (720)
.+-.+||++.+|- .++.... ..|+.++|++|.|. .+|+.|.. .+.++.|+|++|.|+ .+|.++..++.|+.
T Consensus 28 E~h~ldLssc~lm-~i~davy~l~~~~el~~i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~ 104 (177)
T KOG4579|consen 28 ELHFLDLSSCQLM-YIADAVYMLSKGYELTKISLSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRS 104 (177)
T ss_pred Hhhhcccccchhh-HHHHHHHHHhCCceEEEEecccchhh-hCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhh
Confidence 4566788887775 5554432 46778899999998 66666654 458899999999998 78888999999999
Q ss_pred EeccCCcccccCCCCCCCCCCCceeecccccccccc
Q 004994 170 FDLSANNLTGQLPPSTRNLSSLYSLHLQNNKLSGTL 205 (720)
Q Consensus 170 L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~ 205 (720)
|+++.|.|. ..|..+..|.+|..|+..+|.+....
T Consensus 105 lNl~~N~l~-~~p~vi~~L~~l~~Lds~~na~~eid 139 (177)
T KOG4579|consen 105 LNLRFNPLN-AEPRVIAPLIKLDMLDSPENARAEID 139 (177)
T ss_pred cccccCccc-cchHHHHHHHhHHHhcCCCCccccCc
Confidence 999999998 78888888888888888888775444
No 491
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.41 E-value=2e-06 Score=84.73 Aligned_cols=125 Identities=22% Similarity=0.227 Sum_probs=88.5
Q ss_pred CcEEEEEEecccccc-----cccHHHHHHHHHHHHccCC--CceeEEEeEeccC----CeEEEEEeeCCCC-CHHHHhhc
Q 004994 464 GKLLAVKKLSNTVSQ-----RQTDEEFLELASTISRLRH--GNIVELIGYCNEH----GQHLLVYDYGGNC-TLHDLLHS 531 (720)
Q Consensus 464 g~~vavK~l~~~~~~-----~~~~~~~~~e~~~l~~l~H--~niv~l~~~~~~~----~~~~lv~e~~~~g-sL~~~l~~ 531 (720)
++.+-+|........ ........+|.+.+..+.. =.+.+.+++.... ..-++|+|++++. +|.+++..
T Consensus 32 ~~~y~~k~~~~~~~~~~~~~~~~~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~ 111 (206)
T PF06293_consen 32 GRRYYRKRLWNKLRRDRLRFPLRRSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQ 111 (206)
T ss_pred ceEEEECCeechhccchhhhcccchHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHh
Confidence 556666654322111 1233456777777777743 3345566665442 2458999999884 78888854
Q ss_pred cchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCC---CeEEccccCCCCC
Q 004994 532 DEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKL---IVRVSDCGLAPLL 595 (720)
Q Consensus 532 ~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~---~~kl~DFGla~~~ 595 (720)
.. ..+...+..++.++++.+.-||.. +|+|+|+++.|||++.+. .+.++||+-++..
T Consensus 112 ~~----~~~~~~~~~ll~~l~~~i~~lH~~---gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~ 171 (206)
T PF06293_consen 112 WE----QLDPSQRRELLRALARLIAKLHDA---GIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFR 171 (206)
T ss_pred hc----ccchhhHHHHHHHHHHHHHHHHHC---cCCCCCCCcccEEEeCCCCceeEEEEcchhceeC
Confidence 21 144556778999999999999998 999999999999999887 8999999987653
No 492
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=98.40 E-value=6.9e-08 Score=99.72 Aligned_cols=134 Identities=17% Similarity=0.217 Sum_probs=100.2
Q ss_pred ecCceeEEEecCCcccccCCcC-cCCCCCccEEeccCCcccccCCCCc---cccCcEEEecCCcCCCCCcchhhcccccc
Q 004994 69 VFSNVTEIRLTGMNLGGVLADT-LGDLESVINIDLSNNHIGGSIPSNL---PVTVRNFSLSGNQLTGSIPESLSRLTQLL 144 (720)
Q Consensus 69 ~~~~l~~l~L~~n~l~~~~~~~-~~~l~~L~~L~L~~N~l~g~ip~~~---~~~L~~L~Ls~N~l~g~~p~~l~~l~~L~ 144 (720)
.+++|+.|+|+.|+|.-..... -..+++|+.|.|+...|+-.-=..+ .++|+.|+|..|..-+.--.....+..|+
T Consensus 170 qLp~Le~LNls~Nrl~~~~~s~~~~~l~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~ 249 (505)
T KOG3207|consen 170 QLPSLENLNLSSNRLSNFISSNTTLLLSHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQ 249 (505)
T ss_pred hcccchhcccccccccCCccccchhhhhhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHh
Confidence 4789999999999997544332 2357899999999999972110111 16899999999963334444456678899
Q ss_pred cccccccccCCCCC--chhcCCCCCceEeccCCcccc-cCCCC-----CCCCCCCceeecccccccc
Q 004994 145 DLSLNNNHLNGGIP--DAFHQFTGLINFDLSANNLTG-QLPPS-----TRNLSSLYSLHLQNNKLSG 203 (720)
Q Consensus 145 ~L~l~~N~l~g~~p--~~~~~l~~L~~L~ls~N~l~g-~~p~~-----~~~l~~L~~L~l~~N~l~~ 203 (720)
.|||++|++- ..+ ...+.|+.|+.|+++.+.+.. .+|+. ...+++|++|+++.|+++.
T Consensus 250 ~LdLs~N~li-~~~~~~~~~~l~~L~~Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~ 315 (505)
T KOG3207|consen 250 ELDLSNNNLI-DFDQGYKVGTLPGLNQLNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRD 315 (505)
T ss_pred hccccCCccc-ccccccccccccchhhhhccccCcchhcCCCccchhhhcccccceeeecccCcccc
Confidence 9999999986 344 467889999999999999974 24544 4567899999999999853
No 493
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.31 E-value=1.8e-08 Score=109.64 Aligned_cols=121 Identities=32% Similarity=0.408 Sum_probs=66.8
Q ss_pred ccEEeccCCcccccCCCCcc--ccCcEEEecCCcCCCCCcchhhcccccccccccccccCCCCCc-hhcCCCCCceEecc
Q 004994 97 VINIDLSNNHIGGSIPSNLP--VTVRNFSLSGNQLTGSIPESLSRLTQLLDLSLNNNHLNGGIPD-AFHQFTGLINFDLS 173 (720)
Q Consensus 97 L~~L~L~~N~l~g~ip~~~~--~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~l~~N~l~g~~p~-~~~~l~~L~~L~ls 173 (720)
|...+.+.|.|. .+-.++. +.|+.|||++|+|+. .. .+..|+.|++|||+.|+|. .+|. ....+. |..|.|+
T Consensus 166 L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~-v~-~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc~-L~~L~lr 240 (1096)
T KOG1859|consen 166 LATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTK-VD-NLRRLPKLKHLDLSYNCLR-HVPQLSMVGCK-LQLLNLR 240 (1096)
T ss_pred HhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhh-hH-HHHhcccccccccccchhc-cccccchhhhh-heeeeec
Confidence 444445555554 3333222 445555666666552 22 5666777777777777776 3332 223333 6677777
Q ss_pred CCcccccCCCCCCCCCCCceeecccccccccc--ccccccc-cceEEccCCcCc
Q 004994 174 ANNLTGQLPPSTRNLSSLYSLHLQNNKLSGTL--NVLEDLH-LIDLNIENNLFS 224 (720)
Q Consensus 174 ~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~--~~~~~~~-l~~l~l~~N~l~ 224 (720)
+|.++ .+ ..+.+|.+|+.|||++|-|++.- ..+..+. |+.|+|.+|.+.
T Consensus 241 nN~l~-tL-~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 241 NNALT-TL-RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred ccHHH-hh-hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccc
Confidence 77776 22 24566777777777777666543 2233332 666777777654
No 494
>PRK09902 hypothetical protein; Provisional
Probab=98.31 E-value=7.6e-06 Score=79.01 Aligned_cols=142 Identities=15% Similarity=0.130 Sum_probs=102.5
Q ss_pred CeeccCCCceEEEEEeCCCcEEEEEEecccc----cccccHHHHHHHHHHHHccCCC--ceeEEEeEec---c--CCeEE
Q 004994 446 NFIGEGLLGSVYKAELPGGKLLAVKKLSNTV----SQRQTDEEFLELASTISRLRHG--NIVELIGYCN---E--HGQHL 514 (720)
Q Consensus 446 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~----~~~~~~~~~~~e~~~l~~l~H~--niv~l~~~~~---~--~~~~~ 514 (720)
---|+||-+-||+..+.+. .+-+|+-.... .-......|.+|+..+.++..- .+.+.+ ++. . ..+-+
T Consensus 24 pN~~rgG~SgV~r~~~~g~-~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~ 101 (216)
T PRK09902 24 PNYRRNGMSGVQCVERNGK-KLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRAL 101 (216)
T ss_pred CCcCCCCcceEEEEEeCCc-EEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEE
Confidence 3357788888999877544 68889865211 1123557899999999888543 344444 332 1 22567
Q ss_pred EEEeeCCC-CCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCC--eEEccccC
Q 004994 515 LVYDYGGN-CTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLI--VRVSDCGL 591 (720)
Q Consensus 515 lv~e~~~~-gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~--~kl~DFGl 591 (720)
||+|-+++ -+|.+++... .....+...+..+..++++++.-||.. ++.|+|+.+.||+++.++. ++++||--
T Consensus 102 LVTe~L~g~~~L~~~l~~~--~~~~~~~~~k~~il~~va~~ia~LH~~---Gv~Hgdly~khIll~~~g~~~v~lIDlEk 176 (216)
T PRK09902 102 LVTEDMAGFISIADWYAQH--AVSPYSDEVRQAMLKAVALAFKKMHSV---NRQHGCCYVRHIYVKTEGKAEAGFLDLEK 176 (216)
T ss_pred EEEEeCCCCccHHHHHhcC--CcCCcchHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHhheeecCCCCeeEEEEEhhc
Confidence 99997664 5888887432 123456677889999999999999998 9999999999999986666 99999986
Q ss_pred CCC
Q 004994 592 APL 594 (720)
Q Consensus 592 a~~ 594 (720)
++.
T Consensus 177 ~r~ 179 (216)
T PRK09902 177 SRR 179 (216)
T ss_pred cch
Confidence 653
No 495
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.30 E-value=9.6e-08 Score=104.76 Aligned_cols=171 Identities=25% Similarity=0.321 Sum_probs=123.0
Q ss_pred EeecCceeEEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCCCccccCcEEEecCCcCCCCCcchhhcccccccc
Q 004994 67 FCVFSNVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSNLPVTVRNFSLSGNQLTGSIPESLSRLTQLLDL 146 (720)
Q Consensus 67 ~c~~~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L 146 (720)
.+.+.+++.|+|.+|+|... ...+..+++|++|+|++|+|+..-+-.-...|+.|++++|.++ .+. .+..+.+|+.+
T Consensus 91 l~~~~~l~~l~l~~n~i~~i-~~~l~~~~~L~~L~ls~N~I~~i~~l~~l~~L~~L~l~~N~i~-~~~-~~~~l~~L~~l 167 (414)
T KOG0531|consen 91 LSKLKSLEALDLYDNKIEKI-ENLLSSLVNLQVLDLSFNKITKLEGLSTLTLLKELNLSGNLIS-DIS-GLESLKSLKLL 167 (414)
T ss_pred cccccceeeeeccccchhhc-ccchhhhhcchheeccccccccccchhhccchhhheeccCcch-hcc-CCccchhhhcc
Confidence 45677899999999999864 3337889999999999999985554444466999999999998 444 46668999999
Q ss_pred cccccccCCCCCch-hcCCCCCceEeccCCcccccCCCCCCCCCCCceeecccccccccccccccc--ccceEEccCCcC
Q 004994 147 SLNNNHLNGGIPDA-FHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNNKLSGTLNVLEDL--HLIDLNIENNLF 223 (720)
Q Consensus 147 ~l~~N~l~g~~p~~-~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~--~l~~l~l~~N~l 223 (720)
++++|++.. +... ...+.+|+.+++.+|.+. ....+..+..+..+++..|.++-.-+..... .|+.+++++|.+
T Consensus 168 ~l~~n~i~~-ie~~~~~~~~~l~~l~l~~n~i~--~i~~~~~~~~l~~~~l~~n~i~~~~~l~~~~~~~L~~l~l~~n~i 244 (414)
T KOG0531|consen 168 DLSYNRIVD-IENDELSELISLEELDLGGNSIR--EIEGLDLLKKLVLLSLLDNKISKLEGLNELVMLHLRELYLSGNRI 244 (414)
T ss_pred cCCcchhhh-hhhhhhhhccchHHHhccCCchh--cccchHHHHHHHHhhcccccceeccCcccchhHHHHHHhcccCcc
Confidence 999999984 3332 578889999999999996 3344556666777788889886443322222 378889999998
Q ss_pred cccCC---cccCCCccccccCccC
Q 004994 224 SGPIP---EKLLSIPNFRKDGNPF 244 (720)
Q Consensus 224 ~g~~p---~~~~~l~~l~~~~n~~ 244 (720)
. .++ ..+..++.|...+|..
T Consensus 245 ~-~~~~~~~~~~~l~~l~~~~n~~ 267 (414)
T KOG0531|consen 245 S-RSPEGLENLKNLPVLDLSSNRI 267 (414)
T ss_pred c-cccccccccccccccchhhccc
Confidence 8 332 2334444444444443
No 496
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.30 E-value=4.2e-06 Score=92.41 Aligned_cols=150 Identities=18% Similarity=0.211 Sum_probs=95.1
Q ss_pred hcCCCCCCeeccCCCceEEEEEeCCCcEEEEEEecccccccc------------------------c-------------
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQ------------------------T------------- 481 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~------------------------~------------- 481 (720)
...|+. +-|+.++-|.||+|++++|+.||||+.++...... .
T Consensus 125 F~eF~~-~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~ 203 (517)
T COG0661 125 FSEFEP-EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLR 203 (517)
T ss_pred HHHcCC-CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHH
Confidence 344443 67999999999999999999999999876532110 0
Q ss_pred -HHHHHHHHHHHHcc----CCCceeEEEeEec-cCCeEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHH
Q 004994 482 -DEEFLELASTISRL----RHGNIVELIGYCN-EHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARAL 555 (720)
Q Consensus 482 -~~~~~~e~~~l~~l----~H~niv~l~~~~~-~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L 555 (720)
.-++.+|..-+.++ ++.-=+.+=.+|. -.....|+|||++|-.+.+...... ..++ +..++..++++
T Consensus 204 ~ElDy~~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~---~g~d---~k~ia~~~~~~- 276 (517)
T COG0661 204 EELDYRREAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKS---AGID---RKELAELLVRA- 276 (517)
T ss_pred HHhCHHHHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHh---cCCC---HHHHHHHHHHH-
Confidence 01233333333333 2222222323333 3456899999999988887743211 2233 22333333332
Q ss_pred HHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCC
Q 004994 556 QYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFS 597 (720)
Q Consensus 556 ~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~ 597 (720)
|+.+....++.|.|.+|-||+++.++.+-+.|||+...+.+
T Consensus 277 -f~~q~~~dgffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~ 317 (517)
T COG0661 277 -FLRQLLRDGFFHADPHPGNILVRSDGRIVLLDFGIVGRLDP 317 (517)
T ss_pred -HHHHHHhcCccccCCCccceEEecCCcEEEEcCcceecCCH
Confidence 22222223899999999999999999999999999877643
No 497
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.29 E-value=1.1e-05 Score=80.42 Aligned_cols=140 Identities=15% Similarity=0.174 Sum_probs=85.0
Q ss_pred CeeccCCCceEEEEEeCCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCc--eeEEEeEeccCCeEEEEEeeCCCC
Q 004994 446 NFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGN--IVELIGYCNEHGQHLLVYDYGGNC 523 (720)
Q Consensus 446 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~n--iv~l~~~~~~~~~~~lv~e~~~~g 523 (720)
..||+|..+.||+. .|..+++|...... ......+|.++++.+..-. +.+.+++....+...+|||+++|.
T Consensus 7 ~~i~~G~t~~~y~~---~~~~~VlR~~~~~~----~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~ 79 (226)
T TIGR02172 7 TQTGEGGNGESYTH---KTGKWMLKLYNPGF----DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGK 79 (226)
T ss_pred eeecCCCCcceeEe---cCCCEEEEeCCCCC----CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCc
Confidence 56899999999984 24567888876432 2344678888988886433 467788887777888999999986
Q ss_pred C-HHHHhhccc---------------hhc----cccCHHHHH-HHHH----------HH-HHHHHHHHhc-CCCCeeecC
Q 004994 524 T-LHDLLHSDE---------------EAH----KKFSWNIRI-RVAL----------GA-ARALQYLQEV-CEPPIVHGN 570 (720)
Q Consensus 524 s-L~~~l~~~~---------------~~~----~~~~~~~~~-~i~~----------~i-a~~L~~LH~~-~~~~ivHrD 570 (720)
. +.+.+.... ..+ .......+. ++.. .+ .....+|... ..+.++|+|
T Consensus 80 ~~~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~HgD 159 (226)
T TIGR02172 80 RSFSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCLHGD 159 (226)
T ss_pred cchhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceEecC
Confidence 3 221111000 000 000100000 0000 01 1122333222 134578999
Q ss_pred CCCCCeEEcCCCCeEEccccCCC
Q 004994 571 FKSSNILLDEKLIVRVSDCGLAP 593 (720)
Q Consensus 571 lkp~NiLl~~~~~~kl~DFGla~ 593 (720)
+.|.||++++++ +.|+||+.+.
T Consensus 160 ~~~~Nii~~~~~-~~iIDwe~a~ 181 (226)
T TIGR02172 160 FQIGNLITSGKG-TYWIDLGDFG 181 (226)
T ss_pred CCCCcEEEcCCC-cEEEechhcC
Confidence 999999999988 9999999774
No 498
>PF08263 LRRNT_2: Leucine rich repeat N-terminal domain; InterPro: IPR013210 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. This domain is often found at the N terminus of tandem leucine rich repeats.; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1OGQ_A.
Probab=98.23 E-value=1.6e-06 Score=61.48 Aligned_cols=38 Identities=45% Similarity=0.772 Sum_probs=28.3
Q ss_pred HHHHHHHHHHHHhcCC-C--CCCCccCCC-CCCCCCCCceeEee
Q 004994 30 PRDVMALNSLYISLNF-P--PLEKWLSFG-GDPCGDSWQGVFCV 69 (720)
Q Consensus 30 ~~~~~al~~~~~~l~~-~--~~~~w~~~~-~~~c~~~w~gv~c~ 69 (720)
++|++||++||+++.+ + .+.+|...+ .+|| +|.||.|+
T Consensus 2 ~~d~~aLl~~k~~l~~~~~~~l~~W~~~~~~~~C--~W~GV~Cd 43 (43)
T PF08263_consen 2 NQDRQALLAFKKSLNNDPSGVLSSWNPSSDSDPC--SWSGVTCD 43 (43)
T ss_dssp HHHHHHHHHHHHCTT-SC-CCCTT--TT--S-CC--CSTTEEE-
T ss_pred cHHHHHHHHHHHhcccccCcccccCCCcCCCCCe--eeccEEeC
Confidence 5799999999999984 4 589998753 7888 79999995
No 499
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=98.06 E-value=1.4e-06 Score=94.58 Aligned_cols=181 Identities=18% Similarity=0.098 Sum_probs=129.4
Q ss_pred CeeccCCCceEEEEEeCCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCc-eeEEEeEeccCCeEEEEEeeCCCC-
Q 004994 446 NFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGN-IVELIGYCNEHGQHLLVYDYGGNC- 523 (720)
Q Consensus 446 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~n-iv~l~~~~~~~~~~~lv~e~~~~g- 523 (720)
+-+++|+++++||.+-...+...++.+... ....-++++|.+++||| .+..++-++.++..+++++|+..+
T Consensus 248 h~fvK~altknpKkRptaeklL~h~fvs~~-------l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~~i~s~~r 320 (829)
T KOG0576|consen 248 HNFVKGALTKNPKKRPTAEKLLQHPFVSQT-------LSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIPMRICSTGR 320 (829)
T ss_pred HHHHHHHhcCCCccCCChhhheeceeeccc-------hhhHHHHHHHHHccCCCCcccccccCCcccccchhhhhhcCCc
Confidence 457899999999986544445556665432 34567789999999999 777777777778889999999887
Q ss_pred CHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCCCccc
Q 004994 524 TLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNEL 603 (720)
Q Consensus 524 sL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~~~ 603 (720)
+-..... .....+...+...+.....++++++|+. .=+||| ||+..+ ...|..||+.+..+.... .
T Consensus 321 s~~~~~~---~se~~~~~~~~~~~~r~et~~l~~l~~~---~~~~~d----~~l~s~-~~~~~~~~~v~~~L~~~~---~ 386 (829)
T KOG0576|consen 321 SSALEMT---VSEIALEQYQFAYPLRKETRPLAELHSS---YKVHRD----NILGSE-EEVKLLDFAVPPQLTRTM---K 386 (829)
T ss_pred cccccCC---hhhHhhhhhhhhhhhhhhcccccccccc---cccCcc----cccccc-cccccccccCCcccCccc---c
Confidence 2221111 1111222233344555567889999975 348998 777766 578999999998775432 2
Q ss_pred ccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCC
Q 004994 604 SEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYD 647 (720)
Q Consensus 604 ~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~ 647 (720)
.....++..++|||.. .+.+..+.|+|+.|+-..++--|-+|-.
T Consensus 387 ~~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr~ 431 (829)
T KOG0576|consen 387 PRTAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPRS 431 (829)
T ss_pred cccCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCCC
Confidence 3446678889999977 5679999999999998888888877754
No 500
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=98.04 E-value=2.9e-05 Score=85.50 Aligned_cols=141 Identities=18% Similarity=0.223 Sum_probs=92.2
Q ss_pred CeeccCCCceEEEEEeCCCcEEEEEEeccccccccc-----------------------------------HHHHHHHHH
Q 004994 446 NFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQT-----------------------------------DEEFLELAS 490 (720)
Q Consensus 446 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~-----------------------------------~~~~~~e~~ 490 (720)
+-||.-+.|.||+|++++|+.||||+=++....... .-+|..|.+
T Consensus 167 ~piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA~ 246 (538)
T KOG1235|consen 167 EPIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEAK 246 (538)
T ss_pred chhhhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHHH
Confidence 679999999999999999999999987654321100 012333333
Q ss_pred ----HHHccCCCc------eeEEEeEeccCCeEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHh
Q 004994 491 ----TISRLRHGN------IVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQE 560 (720)
Q Consensus 491 ----~l~~l~H~n------iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~ 560 (720)
..+.+.|-+ |.++|-.+ .....|+||||+|..+.|+-.-. ...++.. .|+..+.+ .|++.
T Consensus 247 Nae~~~~~f~~~~~~~~V~VP~Vy~~~--st~RVLtME~~~G~~i~Dl~~i~---~~gi~~~---~i~~~l~~--~~~~q 316 (538)
T KOG1235|consen 247 NAERFRENFKDFSLLTYVLVPKVYWDL--STKRVLTMEYVDGIKINDLDAID---KRGISPH---DILNKLVE--AYLEQ 316 (538)
T ss_pred hHHHHHHHHHhcccccceeCCeehhhc--CcceEEEEEecCCccCCCHHHHH---HcCCCHH---HHHHHHHH--HHHHH
Confidence 223334544 44444332 34689999999998887764321 2233333 34433333 34455
Q ss_pred cCCCCeeecCCCCCCeEEcC----CCCeEEccccCCCCCC
Q 004994 561 VCEPPIVHGNFKSSNILLDE----KLIVRVSDCGLAPLLF 596 (720)
Q Consensus 561 ~~~~~ivHrDlkp~NiLl~~----~~~~kl~DFGla~~~~ 596 (720)
....|++|+|-.|-||++.. ++++.+-|||+...+.
T Consensus 317 If~~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is 356 (538)
T KOG1235|consen 317 IFKTGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVIS 356 (538)
T ss_pred HHhcCCccCCCCCCcEEEecCCCCCccEEEEccccccccc
Confidence 54558999999999999984 6789999999987663
Done!