Query 004994
Match_columns 720
No_of_seqs 621 out of 5252
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 12:08:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004994.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004994hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3omv_A RAF proto-oncogene seri 100.0 1.3E-53 4.3E-58 442.9 21.7 259 440-719 36-298 (307)
2 4gt4_A Tyrosine-protein kinase 100.0 5E-54 1.7E-58 447.9 17.6 256 443-719 29-304 (308)
3 4asz_A BDNF/NT-3 growth factor 100.0 2.4E-54 8.3E-59 448.3 14.5 258 440-719 13-287 (299)
4 4aoj_A High affinity nerve gro 100.0 9.3E-54 3.2E-58 450.1 18.4 258 440-719 41-317 (329)
5 3fpq_A Serine/threonine-protei 100.0 6.7E-52 2.3E-56 426.8 18.9 249 443-715 29-283 (290)
6 4b9d_A Serine/threonine-protei 100.0 2.8E-52 9.7E-57 438.8 13.8 252 440-715 24-277 (350)
7 4ase_A Vascular endothelial gr 100.0 6.8E-52 2.3E-56 439.4 14.6 266 435-720 59-346 (353)
8 4fih_A Serine/threonine-protei 100.0 3.1E-51 1.1E-55 430.2 17.6 249 440-715 74-324 (346)
9 3hmm_A TGF-beta receptor type- 100.0 4.9E-51 1.7E-55 426.2 18.1 268 441-719 4-295 (303)
10 4g3f_A NF-kappa-beta-inducing 100.0 2.8E-51 9.4E-56 429.3 16.0 251 440-719 58-314 (336)
11 4aw0_A HPDK1, 3-phosphoinositi 100.0 1.7E-51 5.7E-56 425.8 13.6 249 440-713 32-283 (311)
12 3hyh_A Carbon catabolite-derep 100.0 4.8E-50 1.6E-54 409.3 18.7 247 440-715 13-263 (275)
13 4fie_A Serine/threonine-protei 100.0 4.8E-50 1.6E-54 431.4 18.9 250 439-715 150-401 (423)
14 3ubd_A Ribosomal protein S6 ki 100.0 1.7E-50 5.6E-55 418.4 11.4 249 440-715 24-282 (304)
15 4g31_A Eukaryotic translation 100.0 3.6E-48 1.2E-52 402.6 17.3 253 439-715 4-280 (299)
16 4b99_A Mitogen-activated prote 100.0 6.1E-47 2.1E-51 408.4 17.2 268 440-715 54-345 (398)
17 2qkw_B Protein kinase; three-h 100.0 1.2E-45 4E-50 390.6 20.0 283 431-719 30-313 (321)
18 4f9c_A Cell division cycle 7-r 100.0 1.1E-45 3.7E-50 394.4 17.4 200 437-650 18-251 (361)
19 3uim_A Brassinosteroid insensi 100.0 7.5E-45 2.6E-49 385.2 20.2 289 427-718 17-308 (326)
20 3v5w_A G-protein coupled recep 100.0 7E-45 2.4E-49 408.2 15.2 250 440-715 189-450 (689)
21 3uto_A Twitchin; kinase, muscl 100.0 2.5E-44 8.5E-49 406.9 16.0 252 439-715 156-411 (573)
22 2nru_A Interleukin-1 receptor- 100.0 2.2E-42 7.5E-47 363.0 27.4 284 427-719 12-304 (307)
23 3soc_A Activin receptor type-2 100.0 2.8E-43 9.5E-48 372.5 17.8 270 440-719 24-316 (322)
24 2psq_A Fibroblast growth facto 100.0 4.7E-43 1.6E-47 377.8 19.1 261 439-720 80-363 (370)
25 3p86_A Serine/threonine-protei 100.0 4.4E-43 1.5E-47 368.6 17.2 260 438-720 35-297 (309)
26 3fe3_A MAP/microtubule affinit 100.0 2.2E-42 7.4E-47 366.0 18.7 249 439-715 14-265 (328)
27 3fxz_A Serine/threonine-protei 100.0 7.1E-42 2.4E-46 357.4 19.9 250 439-715 19-270 (297)
28 3cbl_A C-FES, proto-oncogene t 100.0 1.2E-42 4.1E-47 375.8 13.8 256 440-719 114-372 (377)
29 3s95_A LIMK-1, LIM domain kina 100.0 1.9E-41 6.5E-46 356.5 22.5 257 440-719 10-280 (310)
30 3vhe_A Vascular endothelial gr 100.0 1.1E-42 3.8E-47 373.7 13.3 270 431-720 13-354 (359)
31 3lb7_A RAF proto-oncogene seri 100.0 2.4E-41 8.4E-46 355.0 22.5 259 440-719 36-298 (307)
32 2qol_A Ephrin receptor; recept 100.0 4.6E-42 1.6E-46 370.3 16.2 257 439-719 44-307 (373)
33 3p1a_A MYT1 kinase, membrane-a 100.0 1.5E-41 5.1E-46 357.4 19.5 248 439-715 56-305 (311)
34 3kul_A Ephrin type-A receptor 100.0 5.4E-42 1.9E-46 363.0 16.1 257 440-720 49-312 (325)
35 4hcu_A Tyrosine-protein kinase 100.0 9E-42 3.1E-46 351.2 17.1 253 440-719 10-264 (269)
36 3tt0_A Basic fibroblast growth 100.0 1E-41 3.5E-46 369.3 18.4 261 439-720 68-351 (382)
37 3niz_A Rhodanese family protei 100.0 1.6E-41 5.5E-46 357.1 18.9 269 438-715 19-301 (311)
38 3zgw_A Maternal embryonic leuc 100.0 9.1E-42 3.1E-46 363.4 17.0 251 438-715 8-261 (347)
39 2ivs_A Proto-oncogene tyrosine 100.0 7.5E-42 2.6E-46 359.9 16.0 261 439-720 22-310 (314)
40 1o6l_A RAC-beta serine/threoni 100.0 3.5E-41 1.2E-45 357.8 20.7 249 440-715 5-261 (337)
41 2yab_A Death-associated protei 100.0 2.1E-41 7.1E-46 362.8 19.1 252 438-715 10-273 (361)
42 3sxs_A Cytoplasmic tyrosine-pr 100.0 2E-41 6.9E-46 348.3 18.2 254 439-719 7-262 (268)
43 3l9p_A Anaplastic lymphoma kin 100.0 4E-42 1.4E-46 370.2 13.1 260 439-719 70-343 (367)
44 2c30_A Serine/threonine-protei 100.0 5.6E-41 1.9E-45 354.6 21.5 260 429-715 24-295 (321)
45 1luf_A Muscle-specific tyrosin 100.0 9.8E-42 3.3E-46 363.8 15.7 263 437-720 44-334 (343)
46 3tki_A Serine/threonine-protei 100.0 9.9E-42 3.4E-46 360.6 15.6 255 438-715 5-262 (323)
47 3soa_A Calcium/calmodulin-depe 100.0 2.3E-41 7.9E-46 372.0 18.9 256 437-715 8-268 (444)
48 3dbq_A Dual specificity protei 100.0 1.2E-41 4.1E-46 363.2 16.1 253 439-715 8-274 (343)
49 3qup_A Tyrosine-protein kinase 100.0 9E-42 3.1E-46 361.1 14.8 263 438-720 21-297 (323)
50 3gen_A Tyrosine-protein kinase 100.0 7.9E-42 2.7E-46 354.3 14.1 255 439-720 23-279 (283)
51 3poz_A Epidermal growth factor 100.0 7.8E-42 2.7E-46 362.2 14.2 255 440-719 15-276 (327)
52 4eqm_A Protein kinase; transfe 100.0 2.5E-41 8.5E-46 352.8 17.7 261 439-720 10-274 (294)
53 3c0i_A Peripheral plasma membr 100.0 1.9E-41 6.4E-46 362.8 17.2 256 438-715 22-287 (351)
54 2zmd_A Dual specificity protei 100.0 1.7E-41 5.8E-46 368.1 16.8 252 440-715 56-321 (390)
55 1rjb_A FL cytokine receptor; k 100.0 1.9E-41 6.4E-46 361.9 16.6 262 439-720 44-333 (344)
56 2bdw_A Hypothetical protein K1 100.0 2.5E-41 8.5E-46 363.1 17.3 255 437-715 26-285 (362)
57 1t46_A HOMO sapiens V-KIT hard 100.0 1.8E-41 6.3E-46 356.8 15.6 262 439-720 22-306 (313)
58 2y0a_A Death-associated protei 100.0 6.4E-41 2.2E-45 354.9 19.5 253 439-715 10-272 (326)
59 1opk_A P150, C-ABL, proto-onco 100.0 2.4E-41 8.2E-46 378.3 16.6 256 439-720 219-477 (495)
60 3q4u_A Activin receptor type-1 100.0 7.6E-41 2.6E-45 350.1 19.1 263 438-719 6-300 (301)
61 1qcf_A Haematopoetic cell kina 100.0 2.3E-41 7.8E-46 374.8 16.0 255 439-720 187-443 (454)
62 1ob3_A PFPK5, cell division co 100.0 1.8E-41 6.1E-46 352.8 14.2 267 440-715 2-281 (288)
63 4f0f_A Serine/threonine-protei 100.0 9.1E-41 3.1E-45 347.1 19.5 253 440-719 19-287 (287)
64 4euu_A Serine/threonine-protei 100.0 1.9E-40 6.4E-45 350.3 21.3 272 439-718 8-306 (319)
65 3is5_A Calcium-dependent prote 100.0 4.8E-41 1.6E-45 349.0 16.5 255 439-715 21-279 (285)
66 3kex_A Receptor tyrosine-prote 100.0 1.9E-41 6.4E-46 359.0 13.4 256 440-720 13-275 (325)
67 2zv2_A Calcium/calmodulin-depe 100.0 7.1E-41 2.4E-45 350.0 17.5 251 439-715 12-293 (298)
68 3og7_A AKAP9-BRAF fusion prote 100.0 7.4E-41 2.5E-45 348.3 17.6 261 439-720 23-287 (289)
69 3dtc_A Mitogen-activated prote 100.0 6.4E-41 2.2E-45 345.1 16.9 254 440-719 7-271 (271)
70 3ugc_A Tyrosine-protein kinase 100.0 2.1E-41 7E-46 353.5 13.3 269 439-719 9-289 (295)
71 3h4j_B AMPK kdaid, SNF1-like p 100.0 7.1E-41 2.4E-45 355.1 17.5 248 439-715 8-259 (336)
72 3o0g_A Cell division protein k 100.0 6.7E-41 2.3E-45 349.1 16.9 267 440-715 2-283 (292)
73 1tki_A Titin; serine kinase, m 100.0 3.5E-41 1.2E-45 356.0 14.9 250 438-715 3-258 (321)
74 3txo_A PKC-L, NPKC-ETA, protei 100.0 3.6E-41 1.2E-45 360.0 15.1 250 439-715 22-281 (353)
75 2eva_A TAK1 kinase - TAB1 chim 100.0 1.2E-40 4.2E-45 349.8 18.4 252 440-719 8-261 (307)
76 4fr4_A YANK1, serine/threonine 100.0 9.1E-41 3.1E-45 360.0 17.7 250 440-714 15-271 (384)
77 2pvf_A Fibroblast growth facto 100.0 6.7E-41 2.3E-45 356.1 16.4 261 439-720 34-317 (334)
78 3qd2_B Eukaryotic translation 100.0 1.8E-40 6E-45 352.2 19.4 254 438-715 4-326 (332)
79 3kmu_A ILK, integrin-linked ki 100.0 7.8E-41 2.7E-45 344.2 16.2 253 440-719 10-268 (271)
80 1p4o_A Insulin-like growth fac 100.0 4E-41 1.4E-45 355.9 14.1 266 434-720 19-298 (322)
81 1fot_A TPK1 delta, CAMP-depend 100.0 1.6E-40 5.3E-45 350.2 18.4 246 440-715 6-259 (318)
82 1k9a_A Carboxyl-terminal SRC k 100.0 1.4E-40 4.7E-45 368.0 18.7 249 439-719 192-443 (450)
83 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 9.2E-41 3.2E-45 369.6 17.1 255 439-720 183-439 (452)
84 3brb_A Proto-oncogene tyrosine 100.0 8.8E-41 3E-45 351.8 15.8 263 438-720 32-307 (313)
85 2pmi_A Negative RE, cyclin-dep 100.0 1.3E-40 4.6E-45 351.1 17.1 270 439-715 4-294 (317)
86 4dc2_A Protein kinase C IOTA t 100.0 1.8E-40 6.1E-45 358.9 18.5 257 440-715 52-319 (396)
87 2izr_A Casein kinase I isoform 100.0 1.5E-40 5.1E-45 352.9 17.4 259 439-719 8-279 (330)
88 2xir_A Vascular endothelial gr 100.0 6E-41 2.1E-45 353.4 14.1 268 433-720 20-309 (316)
89 2wqm_A Serine/threonine-protei 100.0 2.8E-40 9.7E-45 347.4 18.6 261 440-719 32-295 (310)
90 2i1m_A Macrophage colony-stimu 100.0 6.8E-41 2.3E-45 355.9 14.0 261 439-719 45-324 (333)
91 1mp8_A Focal adhesion kinase 1 100.0 1.3E-40 4.6E-45 344.8 15.8 256 439-720 14-275 (281)
92 3uc3_A Serine/threonine-protei 100.0 2E-40 6.8E-45 356.0 17.7 252 439-715 19-275 (361)
93 1csn_A Casein kinase-1; phosph 100.0 2.9E-40 9.8E-45 345.1 18.4 260 439-719 9-281 (298)
94 1xjd_A Protein kinase C, theta 100.0 1E-40 3.6E-45 355.1 15.3 249 439-714 16-269 (345)
95 1t4h_A Serine/threonine-protei 100.0 4.3E-40 1.5E-44 342.6 18.8 251 441-715 27-283 (290)
96 3t9t_A Tyrosine-protein kinase 100.0 2E-40 6.8E-45 340.5 15.9 253 440-719 8-262 (267)
97 4agu_A Cyclin-dependent kinase 100.0 1.9E-40 6.6E-45 348.8 16.1 267 440-715 3-285 (311)
98 1rdq_E PKA C-alpha, CAMP-depen 100.0 3.3E-40 1.1E-44 352.3 18.0 246 440-715 41-294 (350)
99 1nxk_A MAP kinase-activated pr 100.0 2.2E-40 7.4E-45 360.5 16.8 250 440-715 61-322 (400)
100 3oz6_A Mitogen-activated prote 100.0 1.2E-40 4.3E-45 361.6 14.9 269 437-715 6-329 (388)
101 3lzb_A Epidermal growth factor 100.0 1.5E-40 5E-45 352.3 15.0 256 439-719 14-276 (327)
102 3kfa_A Tyrosine-protein kinase 100.0 1.9E-40 6.6E-45 344.7 15.6 255 439-719 12-269 (288)
103 3kk8_A Calcium/calmodulin depe 100.0 3.6E-40 1.2E-44 342.0 17.4 254 438-715 4-262 (284)
104 4e5w_A Tyrosine-protein kinase 100.0 1.1E-40 3.8E-45 349.0 13.7 270 440-720 21-301 (302)
105 3a62_A Ribosomal protein S6 ki 100.0 4.1E-40 1.4E-44 348.9 18.2 249 440-715 17-277 (327)
106 1u5q_A Serine/threonine protei 100.0 1.6E-40 5.4E-45 354.8 15.0 247 440-715 54-306 (348)
107 3gni_B Strad alpha; kinase fol 100.0 4.3E-40 1.5E-44 357.6 18.6 272 439-715 24-334 (389)
108 3hko_A Calcium/calmodulin-depe 100.0 2.5E-40 8.7E-45 353.3 16.1 263 434-715 20-331 (345)
109 3rp9_A Mitogen-activated prote 100.0 4.2E-40 1.4E-44 365.5 18.5 196 439-642 52-280 (458)
110 3ttj_A Mitogen-activated prote 100.0 6.4E-40 2.2E-44 363.3 19.7 262 439-715 61-356 (464)
111 3kn6_A Ribosomal protein S6 ki 100.0 4.5E-40 1.5E-44 348.2 17.6 249 444-715 15-271 (325)
112 3f3z_A Calcium/calmodulin-depe 100.0 5.3E-40 1.8E-44 339.5 17.7 252 438-715 7-262 (277)
113 3g33_A Cell division protein k 100.0 4.1E-40 1.4E-44 345.9 16.9 269 438-715 7-297 (308)
114 3mdy_A Bone morphogenetic prot 100.0 2.7E-39 9.3E-44 344.0 23.4 269 433-719 30-329 (337)
115 3llt_A Serine/threonine kinase 100.0 2.3E-40 7.9E-45 355.8 15.2 273 428-715 23-356 (360)
116 1qpc_A LCK kinase; alpha beta 100.0 5.2E-40 1.8E-44 339.9 17.3 254 439-719 12-267 (279)
117 3op5_A Serine/threonine-protei 100.0 1.9E-40 6.5E-45 357.0 14.4 268 439-720 34-328 (364)
118 2w4o_A Calcium/calmodulin-depe 100.0 3.2E-40 1.1E-44 352.8 16.0 249 438-715 51-306 (349)
119 2i0e_A Protein kinase C-beta I 100.0 4.6E-40 1.6E-44 351.3 17.2 250 439-715 19-277 (353)
120 3mwu_A Calmodulin-domain prote 100.0 6.4E-40 2.2E-44 366.7 19.1 254 438-715 20-277 (486)
121 3v8s_A RHO-associated protein 100.0 1.3E-40 4.3E-45 362.0 12.8 260 433-715 62-330 (410)
122 2h8h_A Proto-oncogene tyrosine 100.0 2.2E-40 7.6E-45 373.9 15.3 255 439-720 266-522 (535)
123 2w5a_A Serine/threonine-protei 100.0 9.2E-41 3.2E-45 345.5 11.2 260 439-717 5-270 (279)
124 2eue_A Carbon catabolite derep 100.0 7.3E-40 2.5E-44 338.1 17.8 247 440-715 13-263 (275)
125 4aw2_A Serine/threonine-protei 100.0 4.8E-41 1.6E-45 368.1 9.5 263 432-715 66-339 (437)
126 3a8x_A Protein kinase C IOTA t 100.0 8.9E-40 3.1E-44 348.4 19.0 258 440-715 9-276 (345)
127 4fvq_A Tyrosine-protein kinase 100.0 3.3E-40 1.1E-44 343.1 15.3 249 439-720 7-274 (289)
128 1kob_A Twitchin; kinase, intra 100.0 3.7E-40 1.3E-44 356.3 16.0 252 439-715 50-305 (387)
129 2yex_A Serine/threonine-protei 100.0 7.9E-40 2.7E-44 337.8 17.8 255 438-715 5-262 (276)
130 1mqb_A Ephrin type-A receptor 100.0 7.9E-40 2.7E-44 347.7 18.2 256 440-719 44-307 (333)
131 4ejn_A RAC-alpha serine/threon 100.0 2.4E-40 8.3E-45 366.0 14.7 249 440-715 148-405 (446)
132 3lxl_A Tyrosine-protein kinase 100.0 2.5E-40 8.7E-45 350.6 14.0 271 440-720 23-302 (327)
133 4fl3_A Tyrosine-protein kinase 100.0 5.4E-40 1.9E-44 376.9 17.7 249 446-719 375-629 (635)
134 3fme_A Dual specificity mitoge 100.0 2.6E-40 8.9E-45 344.0 13.6 256 439-715 6-267 (290)
135 1xbb_A Tyrosine-protein kinase 100.0 5.1E-40 1.7E-44 342.2 15.8 255 440-719 16-277 (291)
136 2x4f_A Myosin light chain kina 100.0 4.4E-40 1.5E-44 354.6 15.8 246 445-715 94-343 (373)
137 1x8b_A WEE1HU, WEE1-like prote 100.0 4.7E-40 1.6E-44 341.4 15.3 249 438-715 9-280 (289)
138 2a2a_A Death-associated protei 100.0 1.2E-39 4.1E-44 344.5 18.6 253 439-715 11-273 (321)
139 3i6u_A CDS1, serine/threonine- 100.0 1.8E-39 6E-44 355.7 20.4 255 437-715 132-400 (419)
140 3lij_A Calcium/calmodulin depe 100.0 6.6E-40 2.2E-44 367.2 17.4 254 438-715 35-292 (494)
141 1fvr_A Tyrosine-protein kinase 100.0 5.3E-40 1.8E-44 348.2 15.6 257 440-720 25-299 (327)
142 1u59_A Tyrosine-protein kinase 100.0 6.1E-40 2.1E-44 340.9 15.8 254 441-719 10-270 (287)
143 3gbz_A Kinase, CMGC CDK; ssgci 100.0 1.4E-40 4.9E-45 352.8 11.1 268 438-715 32-319 (329)
144 3fdn_A Serine/threonine-protei 100.0 8.9E-40 3E-44 338.2 16.7 248 439-715 8-258 (279)
145 2y94_A 5'-AMP-activated protei 100.0 1.3E-39 4.3E-44 360.5 19.0 248 440-715 16-267 (476)
146 2ozo_A Tyrosine-protein kinase 100.0 9.5E-40 3.2E-44 374.0 18.6 248 447-719 343-596 (613)
147 3lxp_A Non-receptor tyrosine-p 100.0 3.8E-40 1.3E-44 347.8 13.9 267 442-719 33-308 (318)
148 3c1x_A Hepatocyte growth facto 100.0 3.3E-40 1.1E-44 355.5 13.5 254 442-719 91-353 (373)
149 3gxj_A TGF-beta receptor type- 100.0 5.2E-41 1.8E-45 351.5 7.0 262 439-720 2-296 (303)
150 4aaa_A Cyclin-dependent kinase 100.0 2.5E-40 8.7E-45 351.2 12.4 267 440-715 25-307 (331)
151 3e7e_A HBUB1, BUB1A, mitotic c 100.0 8.9E-40 3.1E-44 351.9 16.8 251 439-719 64-337 (365)
152 3ork_A Serine/threonine protei 100.0 2.2E-40 7.4E-45 348.6 11.5 257 438-715 10-274 (311)
153 3cok_A Serine/threonine-protei 100.0 1.6E-39 5.6E-44 336.0 17.8 250 440-715 11-263 (278)
154 4eut_A Serine/threonine-protei 100.0 8.2E-40 2.8E-44 356.0 16.2 274 439-720 8-308 (396)
155 3pls_A Macrophage-stimulating 100.0 1.5E-39 5.2E-44 339.6 17.6 255 442-720 23-286 (298)
156 1b6c_B TGF-B superfamily recep 100.0 7.7E-39 2.6E-43 341.3 23.3 271 431-719 33-334 (342)
157 2vd5_A DMPK protein; serine/th 100.0 1.4E-40 4.8E-45 361.9 10.0 263 431-715 52-328 (412)
158 3cc6_A Protein tyrosine kinase 100.0 1.2E-39 4.2E-44 337.5 16.6 255 439-719 11-271 (281)
159 3dls_A PAS domain-containing s 100.0 5.7E-40 1.9E-44 348.8 14.4 245 437-715 21-275 (335)
160 2yfx_A Tyrosine-protein kinase 100.0 5.6E-40 1.9E-44 348.0 14.3 260 439-719 29-302 (327)
161 2h34_A Serine/threonine-protei 100.0 1.5E-39 5.3E-44 341.7 17.5 259 439-720 33-295 (309)
162 3q5i_A Protein kinase; CDPK, m 100.0 1.7E-39 5.9E-44 364.7 19.0 254 438-715 34-302 (504)
163 3g2f_A Bone morphogenetic prot 100.0 1.5E-39 5.3E-44 345.8 17.6 270 440-720 13-317 (336)
164 3c4z_A Rhodopsin kinase; Ser/T 100.0 1.2E-39 4E-44 364.9 17.1 256 440-714 185-448 (543)
165 4hgt_A Casein kinase I isoform 100.0 2.7E-39 9.3E-44 337.3 18.6 262 437-719 6-278 (296)
166 1byg_A CSK, protein (C-termina 100.0 1.4E-39 4.7E-44 336.6 16.1 249 439-719 20-271 (278)
167 2ac3_A MAP kinase-interacting 100.0 2.4E-39 8.3E-44 341.2 18.1 264 439-715 11-296 (316)
168 2r5t_A Serine/threonine-protei 100.0 1E-39 3.5E-44 351.0 15.4 248 440-714 38-289 (373)
169 3cek_A Dual specificity protei 100.0 5.2E-40 1.8E-44 345.9 12.7 255 437-715 25-293 (313)
170 2v62_A Serine/threonine-protei 100.0 1.2E-39 4E-44 348.2 15.4 263 440-719 37-326 (345)
171 1cm8_A Phosphorylated MAP kina 100.0 1.6E-39 5.4E-44 349.8 16.3 263 439-715 24-308 (367)
172 2qr7_A Ribosomal protein S6 ki 100.0 8.9E-40 3.1E-44 348.0 14.1 252 438-715 20-278 (342)
173 3n9x_A Phosphotransferase; mal 100.0 1.5E-39 5.2E-44 357.8 16.3 201 439-647 25-253 (432)
174 3an0_A Dual specificity mitoge 100.0 6.4E-40 2.2E-44 349.5 12.6 256 438-715 49-311 (340)
175 2acx_A G protein-coupled recep 100.0 9.1E-40 3.1E-44 366.5 14.4 255 439-715 183-445 (576)
176 3f66_A Hepatocyte growth facto 100.0 1.8E-39 6E-44 339.3 15.7 257 440-720 25-290 (298)
177 2buj_A Serine/threonine-protei 100.0 5.2E-40 1.8E-44 346.5 11.7 261 439-719 28-304 (317)
178 3lm5_A Serine/threonine-protei 100.0 1.4E-39 4.8E-44 344.9 14.9 263 431-715 19-288 (327)
179 3bhy_A Death-associated protei 100.0 3.5E-39 1.2E-43 334.3 17.5 253 439-715 4-266 (283)
180 2xrw_A Mitogen-activated prote 100.0 5.7E-39 2E-43 346.3 19.8 264 439-715 24-319 (371)
181 3nyv_A Calmodulin-domain prote 100.0 9.1E-40 3.1E-44 365.5 13.9 254 438-715 24-282 (484)
182 2rku_A Serine/threonine-protei 100.0 3.3E-39 1.1E-43 336.6 17.1 250 439-715 14-266 (294)
183 3uzp_A CKI-delta, CKID, casein 100.0 4.7E-39 1.6E-43 335.6 18.1 261 438-719 7-278 (296)
184 3mi9_A Cell division protein k 100.0 6.7E-39 2.3E-43 343.2 19.7 269 440-715 17-312 (351)
185 2owb_A Serine/threonine-protei 100.0 3.1E-39 1E-43 343.5 16.8 250 439-715 40-292 (335)
186 2y7j_A Phosphorylase B kinase 100.0 6.1E-39 2.1E-43 345.1 19.3 260 432-715 86-360 (365)
187 3eqc_A Dual specificity mitoge 100.0 1.1E-39 3.9E-44 350.4 13.6 266 439-715 32-325 (360)
188 3byv_A Rhoptry kinase; malaria 100.0 2.2E-40 7.5E-45 358.2 7.9 245 439-715 72-360 (377)
189 3eb0_A Putative uncharacterize 100.0 1.4E-39 4.7E-44 352.8 13.9 264 437-715 4-322 (383)
190 3ll6_A Cyclin G-associated kin 100.0 1.2E-39 4.1E-44 346.5 12.4 254 439-719 27-306 (337)
191 2vgo_A Serine/threonine-protei 100.0 5.7E-39 1.9E-43 333.1 16.9 247 440-715 14-263 (284)
192 2a19_B Interferon-induced, dou 100.0 2.6E-39 9E-44 335.3 14.3 246 438-719 9-272 (284)
193 2h6d_A 5'-AMP-activated protei 100.0 1.1E-38 3.7E-43 329.4 18.5 249 439-715 10-262 (276)
194 1ua2_A CAK, cell division prot 100.0 3.7E-39 1.3E-43 344.5 15.4 269 438-715 8-292 (346)
195 3pg1_A Mitogen-activated prote 100.0 2.9E-39 1E-43 347.5 14.6 276 430-715 12-317 (362)
196 2ycf_A Serine/threonine-protei 100.0 6.3E-39 2.2E-43 339.1 16.7 254 438-715 8-275 (322)
197 2wtk_C Serine/threonine-protei 100.0 1.6E-38 5.6E-43 333.1 19.6 254 438-715 3-264 (305)
198 3mtl_A Cell division protein k 100.0 8.2E-40 2.8E-44 346.2 9.7 266 440-715 2-282 (324)
199 1u46_A ACK-1, activated CDC42 100.0 4.3E-39 1.5E-43 335.0 15.0 257 440-719 18-282 (291)
200 3sv0_A Casein kinase I-like; t 100.0 1.8E-38 6.1E-43 351.9 20.4 260 439-719 6-276 (483)
201 2jam_A Calcium/calmodulin-depe 100.0 9.7E-39 3.3E-43 334.8 17.4 251 438-715 7-262 (304)
202 2r3i_A Cell division protein k 100.0 5.6E-39 1.9E-43 335.6 15.4 268 440-715 3-284 (299)
203 3pfq_A PKC-B, PKC-beta, protei 100.0 8.8E-39 3E-43 369.4 18.6 250 439-715 340-598 (674)
204 3nsz_A CK II alpha, casein kin 100.0 9.3E-39 3.2E-43 338.9 17.3 258 440-715 36-320 (330)
205 3q60_A ROP5B; pseudokinase, tr 100.0 1.6E-39 5.3E-44 350.8 11.5 255 440-715 62-353 (371)
206 1vzo_A Ribosomal protein S6 ki 100.0 1.8E-39 6E-44 348.0 11.8 255 440-716 54-323 (355)
207 3a7i_A MST3 kinase, serine/thr 100.0 8E-39 2.7E-43 335.2 16.3 250 439-716 21-272 (303)
208 2y4i_B KSR2, HKSR2, kinase sup 100.0 1.2E-39 3.9E-44 344.1 9.9 258 437-719 30-300 (319)
209 3kvw_A DYRK2, dual specificity 100.0 1.8E-38 6.1E-43 348.7 19.5 198 439-650 96-303 (429)
210 2w1i_A JAK2; chromosomal rearr 100.0 3.1E-39 1.1E-43 342.1 12.5 268 440-719 41-320 (326)
211 2wei_A Calmodulin-domain prote 100.0 1.2E-38 4.2E-43 331.1 16.8 255 437-715 19-277 (287)
212 2fst_X Mitogen-activated prote 100.0 2.9E-39 9.8E-44 347.5 12.3 262 439-715 28-312 (367)
213 2clq_A Mitogen-activated prote 100.0 1.1E-38 3.6E-43 332.7 16.2 252 441-715 23-279 (295)
214 2vwi_A Serine/threonine-protei 100.0 3.5E-39 1.2E-43 337.7 12.1 264 439-715 14-288 (303)
215 2x7f_A TRAF2 and NCK-interacti 100.0 3.5E-39 1.2E-43 341.6 12.2 257 433-715 17-287 (326)
216 1j1b_A Glycogen synthase kinas 100.0 6.4E-39 2.2E-43 351.4 14.6 261 440-715 54-337 (420)
217 2jii_A Serine/threonine-protei 100.0 3.2E-39 1.1E-43 345.8 11.5 261 440-720 42-335 (352)
218 2pml_X PFPK7, Ser/Thr protein 100.0 6.4E-39 2.2E-43 342.8 13.5 265 439-715 30-323 (348)
219 3com_A Serine/threonine-protei 100.0 2.7E-38 9.3E-43 332.9 18.1 251 438-715 27-279 (314)
220 1blx_A Cyclin-dependent kinase 100.0 2E-38 6.9E-43 335.7 16.6 269 438-715 9-297 (326)
221 4e7w_A Glycogen synthase kinas 100.0 5.3E-39 1.8E-43 349.1 12.2 262 439-715 39-322 (394)
222 4exu_A Mitogen-activated prote 100.0 1.7E-38 5.9E-43 342.5 15.4 263 438-715 40-324 (371)
223 1phk_A Phosphorylase kinase; g 100.0 2.9E-38 9.8E-43 330.0 16.6 255 437-715 14-284 (298)
224 3e3p_A Protein kinase, putativ 100.0 2.1E-38 7.1E-43 340.5 15.7 272 433-715 16-315 (360)
225 2j7t_A Serine/threonine-protei 100.0 1.4E-38 4.8E-43 333.1 13.8 253 438-715 17-276 (302)
226 3qyz_A Mitogen-activated prote 100.0 3E-38 1E-42 339.8 16.6 266 439-715 26-314 (364)
227 3rgf_A Cyclin-dependent kinase 100.0 6.1E-38 2.1E-42 342.4 18.1 267 441-715 21-334 (405)
228 2b9h_A MAP kinase FUS3, mitoge 100.0 1.7E-38 5.8E-43 340.2 13.0 267 439-715 10-306 (353)
229 3aln_A Dual specificity mitoge 100.0 3.3E-38 1.1E-42 334.3 14.9 257 440-715 22-286 (327)
230 2j0j_A Focal adhesion kinase 1 100.0 4.3E-38 1.5E-42 362.5 16.8 256 439-720 389-650 (656)
231 1z57_A Dual specificity protei 100.0 8.3E-38 2.8E-42 332.5 17.2 263 439-715 13-329 (339)
232 2i6l_A Mitogen-activated prote 100.0 5E-38 1.7E-42 331.5 15.0 265 439-715 10-306 (320)
233 1zy4_A Serine/threonine-protei 100.0 4.9E-38 1.7E-42 328.7 14.6 253 438-715 4-284 (303)
234 3coi_A Mitogen-activated prote 100.0 6.2E-38 2.1E-42 335.9 15.5 261 439-715 23-306 (353)
235 1wak_A Serine/threonine-protei 100.0 7E-38 2.4E-42 340.9 16.1 264 439-715 36-392 (397)
236 2rio_A Serine/threonine-protei 100.0 1.1E-37 3.7E-42 343.1 16.4 253 441-715 16-296 (434)
237 2vx3_A Dual specificity tyrosi 100.0 2.1E-37 7E-42 335.5 18.2 201 438-650 52-262 (382)
238 3fhr_A MAP kinase-activated pr 100.0 1.3E-37 4.3E-42 331.0 14.3 253 438-715 26-288 (336)
239 2dyl_A Dual specificity mitoge 100.0 3E-37 1E-41 325.4 16.8 254 439-715 24-284 (318)
240 2iwi_A Serine/threonine-protei 100.0 1.2E-37 4.1E-42 327.7 13.3 247 434-715 25-284 (312)
241 3a99_A Proto-oncogene serine/t 100.0 1.1E-37 3.8E-42 329.3 12.2 245 436-715 39-294 (320)
242 2eu9_A Dual specificity protei 100.0 3.9E-37 1.3E-41 329.6 16.4 263 439-715 18-334 (355)
243 3uqc_A Probable conserved tran 100.0 2E-36 6.9E-41 314.0 21.2 231 439-719 30-263 (286)
244 3p23_A Serine/threonine-protei 100.0 3.3E-37 1.1E-41 338.4 14.6 249 440-715 24-284 (432)
245 1q8y_A SR protein kinase; tran 100.0 1.8E-37 6.2E-42 334.8 10.6 263 440-715 19-334 (373)
246 3qa8_A MGC80376 protein; kinas 100.0 2E-36 6.8E-41 342.6 17.3 260 440-712 14-295 (676)
247 3m2w_A MAP kinase-activated pr 100.0 6.4E-36 2.2E-40 312.6 17.3 231 440-715 17-257 (299)
248 2pzi_A Probable serine/threoni 100.0 3.1E-36 1.1E-40 350.2 15.1 239 439-718 79-325 (681)
249 3dzo_A Rhoptry kinase domain; 100.0 1.1E-35 3.9E-40 324.8 11.3 244 440-715 78-364 (413)
250 2vuw_A Serine/threonine-protei 100.0 2.4E-35 8.3E-40 313.5 9.6 245 439-715 19-332 (336)
251 1ogq_A PGIP-2, polygalacturona 100.0 9.7E-32 3.3E-36 282.5 16.4 220 27-247 2-233 (313)
252 4azs_A Methyltransferase WBDD; 100.0 1.3E-29 4.5E-34 286.5 4.2 187 448-646 242-438 (569)
253 4ecn_A Leucine-rich repeat pro 99.9 6.9E-28 2.4E-32 283.1 11.2 218 24-246 262-606 (876)
254 3rgz_A Protein brassinosteroid 99.9 7.1E-27 2.4E-31 275.5 14.4 220 25-249 6-261 (768)
255 4eco_A Uncharacterized protein 99.9 2.1E-27 7.1E-32 273.8 8.1 216 25-245 24-363 (636)
256 4fcg_A Uncharacterized protein 99.9 2E-26 6.8E-31 243.5 11.9 220 27-252 23-270 (328)
257 3en9_A Glycoprotease, O-sialog 99.9 7.9E-26 2.7E-30 254.2 5.2 186 444-647 340-539 (540)
258 1ogq_A PGIP-2, polygalacturona 99.9 5.1E-24 1.7E-28 223.6 9.8 187 66-252 71-285 (313)
259 3rgz_A Protein brassinosteroid 99.9 1.7E-23 5.6E-28 246.8 14.1 190 65-254 460-723 (768)
260 2o6q_A Variable lymphocyte rec 99.9 5.1E-22 1.8E-26 203.8 18.0 175 72-247 38-220 (270)
261 2o6s_A Variable lymphocyte rec 99.9 2E-22 6.7E-27 198.3 12.2 175 57-236 3-190 (208)
262 4fcg_A Uncharacterized protein 99.9 7.7E-22 2.6E-26 208.3 13.8 182 67-252 100-294 (328)
263 1zar_A RIO2 kinase; serine kin 99.9 2.5E-22 8.4E-27 207.0 8.8 145 432-595 82-242 (282)
264 3m19_A Variable lymphocyte rec 99.9 2.2E-21 7.6E-26 196.7 15.4 181 62-246 6-193 (251)
265 1p9a_G Platelet glycoprotein I 99.8 7.9E-21 2.7E-25 196.8 16.3 176 71-248 31-211 (290)
266 1ozn_A Reticulon 4 receptor; N 99.8 1.2E-20 4E-25 195.3 16.5 176 71-246 32-212 (285)
267 1ozn_A Reticulon 4 receptor; N 99.8 6.2E-21 2.1E-25 197.3 14.1 183 66-248 51-241 (285)
268 3m19_A Variable lymphocyte rec 99.8 2.5E-20 8.5E-25 189.0 15.5 158 71-228 35-196 (251)
269 2z66_A Variable lymphocyte rec 99.8 7.3E-21 2.5E-25 198.9 11.3 188 57-245 3-209 (306)
270 2z62_A TOLL-like receptor 4, v 99.8 2.6E-20 8.8E-25 191.7 13.0 158 72-229 29-195 (276)
271 3j0a_A TOLL-like receptor 5; m 99.8 5.8E-20 2E-24 218.8 15.8 91 160-250 475-565 (844)
272 3zyi_A Leucine-rich repeat-con 99.8 1.1E-19 3.8E-24 200.7 16.4 185 62-246 55-253 (452)
273 3rfs_A Internalin B, repeat mo 99.8 3.3E-20 1.1E-24 190.4 11.1 172 67-244 59-234 (272)
274 3zyj_A Leucine-rich repeat-con 99.8 1.6E-19 5.3E-24 198.9 16.8 184 62-245 44-241 (440)
275 2z66_A Variable lymphocyte rec 99.8 5.3E-20 1.8E-24 192.3 12.1 180 65-245 46-233 (306)
276 2z62_A TOLL-like receptor 4, v 99.8 1.1E-19 3.7E-24 187.0 13.6 183 66-248 47-240 (276)
277 3rfs_A Internalin B, repeat mo 99.8 3.3E-19 1.1E-23 182.9 16.2 173 69-245 39-218 (272)
278 4eco_A Uncharacterized protein 99.8 4.3E-20 1.5E-24 212.7 10.6 180 67-249 202-416 (636)
279 3zyj_A Leucine-rich repeat-con 99.8 1.5E-19 5.2E-24 199.0 14.4 179 65-245 82-265 (440)
280 2id5_A Lingo-1, leucine rich r 99.8 1.5E-19 5.2E-24 201.1 14.3 184 62-245 12-210 (477)
281 2ft3_A Biglycan; proteoglycan, 99.8 3E-19 1E-23 188.9 15.0 165 72-238 79-267 (332)
282 1xku_A Decorin; proteoglycan, 99.8 3.6E-19 1.2E-23 188.2 15.5 195 48-246 18-227 (330)
283 3oja_B Anopheles plasmodium-re 99.8 1.8E-19 6E-24 206.3 14.2 134 71-204 51-186 (597)
284 2xwt_C Thyrotropin receptor; s 99.8 2.2E-19 7.4E-24 180.6 13.1 174 71-246 31-216 (239)
285 1xku_A Decorin; proteoglycan, 99.8 5.5E-19 1.9E-23 186.7 16.5 177 64-244 69-249 (330)
286 3v47_A TOLL-like receptor 5B a 99.8 1.9E-19 6.4E-24 199.1 13.0 108 141-248 275-384 (455)
287 3e6j_A Variable lymphocyte rec 99.8 5.3E-19 1.8E-23 176.4 14.0 157 55-227 15-175 (229)
288 1wwl_A Monocyte differentiatio 99.8 7.9E-20 2.7E-24 191.6 8.4 173 70-244 94-286 (312)
289 3cvr_A Invasion plasmid antige 99.8 1E-19 3.5E-24 204.5 9.6 161 48-229 33-197 (571)
290 1wwl_A Monocyte differentiatio 99.8 8.1E-20 2.8E-24 191.5 8.0 173 72-245 64-263 (312)
291 2v9t_B SLIT homolog 2 protein 99.8 4.8E-19 1.7E-23 175.6 13.1 147 76-225 16-166 (220)
292 3o6n_A APL1; leucine-rich repe 99.8 4.2E-19 1.5E-23 192.2 13.8 133 71-203 45-179 (390)
293 2v70_A SLIT-2, SLIT homolog 2 99.8 4.8E-19 1.6E-23 175.6 12.7 151 75-228 15-170 (220)
294 4ecn_A Leucine-rich repeat pro 99.8 1.9E-19 6.5E-24 211.5 11.4 177 67-247 444-656 (876)
295 3v47_A TOLL-like receptor 5B a 99.8 4.4E-19 1.5E-23 196.1 13.6 181 67-247 75-359 (455)
296 2v70_A SLIT-2, SLIT homolog 2 99.8 1.2E-18 4.2E-23 172.6 15.2 149 57-205 7-169 (220)
297 2ft3_A Biglycan; proteoglycan, 99.8 1E-18 3.4E-23 184.9 15.5 186 57-247 29-229 (332)
298 2z80_A TOLL-like receptor 2, v 99.8 2.5E-19 8.7E-24 191.2 10.7 181 62-245 31-235 (353)
299 3oja_B Anopheles plasmodium-re 99.8 3.9E-19 1.3E-23 203.4 13.0 158 66-224 94-314 (597)
300 3oja_A Leucine-rich immune mol 99.8 2.4E-19 8.2E-24 199.6 10.8 176 62-246 49-225 (487)
301 1w8a_A SLIT protein; signaling 99.8 4.9E-19 1.7E-23 171.6 11.4 159 74-235 11-173 (192)
302 2xot_A Amphoterin-induced prot 99.8 6.7E-19 2.3E-23 188.4 13.2 173 74-249 21-206 (361)
303 3vq2_A TLR4, TOLL-like recepto 99.8 3.3E-19 1.1E-23 204.7 11.5 172 69-241 348-527 (606)
304 3zyi_A Leucine-rich repeat-con 99.8 1.2E-18 4.2E-23 192.4 15.3 181 65-247 93-278 (452)
305 4glp_A Monocyte differentiatio 99.8 3.4E-19 1.2E-23 186.6 9.8 159 71-231 91-270 (310)
306 3t6q_A CD180 antigen; protein- 99.8 5.7E-19 1.9E-23 202.7 12.6 170 68-237 347-526 (606)
307 2o6q_A Variable lymphocyte rec 99.8 1.8E-18 6.3E-23 177.2 15.1 163 65-227 55-221 (270)
308 3e6j_A Variable lymphocyte rec 99.8 2.6E-18 9E-23 171.4 15.2 151 97-248 21-175 (229)
309 2v9t_B SLIT homolog 2 protein 99.8 1.5E-18 5.2E-23 172.0 13.0 150 98-248 14-168 (220)
310 1p9a_G Platelet glycoprotein I 99.8 2.4E-18 8E-23 178.2 14.1 158 65-225 49-209 (290)
311 2z81_A CD282 antigen, TOLL-lik 99.8 5.8E-19 2E-23 200.1 10.3 182 62-245 5-209 (549)
312 1ziw_A TOLL-like receptor 3; i 99.8 2.2E-18 7.5E-23 200.6 14.9 168 71-238 25-198 (680)
313 3o6n_A APL1; leucine-rich repe 99.8 1.7E-18 5.7E-23 187.5 12.7 169 66-236 88-319 (390)
314 4b8c_D Glucose-repressible alc 99.8 1.9E-19 6.4E-24 209.7 5.3 202 27-234 128-364 (727)
315 2xwt_C Thyrotropin receptor; s 99.8 1.3E-18 4.3E-23 175.0 10.4 175 65-242 49-236 (239)
316 3oja_A Leucine-rich immune mol 99.8 6.2E-19 2.1E-23 196.2 8.7 168 70-245 33-204 (487)
317 1zth_A RIO1 serine protein kin 99.8 1.2E-18 4.1E-23 177.2 9.7 138 442-595 49-219 (258)
318 3a79_B TLR6, VLRB.59, TOLL-lik 99.8 3.1E-18 1.1E-22 194.6 14.0 174 72-246 277-484 (562)
319 2z7x_B TOLL-like receptor 1, v 99.8 2.2E-18 7.6E-23 193.9 12.6 174 71-247 247-456 (520)
320 1ziw_A TOLL-like receptor 3; i 99.8 3.1E-18 1.1E-22 199.3 14.1 183 66-249 400-626 (680)
321 2xot_A Amphoterin-induced prot 99.7 2.6E-18 8.9E-23 183.8 11.0 167 58-225 15-203 (361)
322 3j0a_A TOLL-like receptor 5; m 99.7 4E-18 1.4E-22 202.9 13.8 175 61-235 14-198 (844)
323 3o53_A Protein LRIM1, AGAP0063 99.7 1.9E-18 6.5E-23 181.5 9.6 173 63-244 50-223 (317)
324 3vq2_A TLR4, TOLL-like recepto 99.7 2.3E-18 8E-23 197.6 10.8 167 70-239 327-501 (606)
325 3t6q_A CD180 antigen; protein- 99.7 5.6E-18 1.9E-22 194.4 13.5 184 65-248 319-513 (606)
326 2z80_A TOLL-like receptor 2, v 99.7 8.3E-19 2.8E-23 187.2 5.4 160 66-227 71-238 (353)
327 2id5_A Lingo-1, leucine rich r 99.7 6.8E-18 2.3E-22 187.8 12.8 160 65-224 74-237 (477)
328 2o6s_A Variable lymphocyte rec 99.7 1.8E-17 6.1E-22 162.8 14.3 165 74-245 10-178 (208)
329 4glp_A Monocyte differentiatio 99.7 1.3E-18 4.4E-23 182.2 5.8 175 68-244 114-306 (310)
330 2z63_A TOLL-like receptor 4, v 99.7 5.7E-18 2E-22 192.7 11.0 176 70-246 346-532 (570)
331 4ezg_A Putative uncharacterize 99.7 6.4E-18 2.2E-22 164.4 9.7 151 68-225 41-195 (197)
332 1h6u_A Internalin H; cell adhe 99.7 1.5E-17 5.1E-22 173.8 12.2 166 67-244 59-229 (308)
333 2z7x_B TOLL-like receptor 1, v 99.7 1.3E-17 4.4E-22 187.7 11.9 111 63-177 37-150 (520)
334 1w8a_A SLIT protein; signaling 99.7 2.7E-17 9.1E-22 159.3 12.2 130 98-228 11-143 (192)
335 4g8a_A TOLL-like receptor 4; l 99.7 2.6E-17 8.9E-22 189.5 13.6 162 72-233 53-223 (635)
336 3a79_B TLR6, VLRB.59, TOLL-lik 99.7 3.1E-17 1.1E-21 186.4 14.0 120 64-187 69-193 (562)
337 3o53_A Protein LRIM1, AGAP0063 99.7 5.6E-18 1.9E-22 177.9 6.6 168 67-245 30-204 (317)
338 2z63_A TOLL-like receptor 4, v 99.7 3.8E-17 1.3E-21 185.9 12.5 164 71-234 28-200 (570)
339 1h6t_A Internalin B; cell adhe 99.7 4.9E-17 1.7E-21 168.4 11.6 161 69-242 44-207 (291)
340 2z81_A CD282 antigen, TOLL-lik 99.7 8.8E-17 3E-21 182.1 13.2 173 68-245 4-182 (549)
341 2wfh_A SLIT homolog 2 protein 99.7 1.6E-16 5.5E-21 153.8 13.0 124 75-202 14-139 (193)
342 3cvr_A Invasion plasmid antige 99.7 4.7E-17 1.6E-21 182.9 10.2 156 71-247 80-242 (571)
343 4g8a_A TOLL-like receptor 4; l 99.7 1.6E-16 5.3E-21 183.0 14.2 162 88-249 413-584 (635)
344 2o6r_A Variable lymphocyte rec 99.7 2.1E-16 7.2E-21 150.8 12.6 137 57-206 3-141 (177)
345 1h6u_A Internalin H; cell adhe 99.7 1.2E-16 4.3E-21 166.8 12.0 164 69-245 39-205 (308)
346 2ell_A Acidic leucine-rich nuc 99.7 1.1E-16 3.9E-21 151.2 9.6 132 71-205 24-163 (168)
347 1jl5_A Outer protein YOPM; leu 99.7 4.8E-16 1.6E-20 171.2 16.0 160 71-245 131-290 (454)
348 1h6t_A Internalin B; cell adhe 99.7 1.5E-16 5.2E-21 164.7 11.1 148 67-225 64-214 (291)
349 1m9s_A Internalin B; cell inva 99.7 3.7E-16 1.3E-20 177.4 14.4 155 67-232 61-218 (605)
350 2o6r_A Variable lymphocyte rec 99.7 3.7E-16 1.3E-20 149.1 12.2 131 97-228 9-141 (177)
351 1m9s_A Internalin B; cell inva 99.7 2.1E-16 7.3E-21 179.4 12.0 164 68-244 40-206 (605)
352 2ell_A Acidic leucine-rich nuc 99.7 3.1E-16 1.1E-20 148.2 11.1 133 93-229 22-164 (168)
353 2wfh_A SLIT homolog 2 protein 99.6 6.3E-16 2.2E-20 149.6 12.9 126 98-225 13-140 (193)
354 4ay9_X Follicle-stimulating ho 99.6 4.7E-16 1.6E-20 165.5 13.0 186 59-245 7-212 (350)
355 2je0_A Acidic leucine-rich nuc 99.6 1.2E-16 4E-21 147.9 6.9 127 70-198 16-149 (149)
356 4b8c_D Glucose-repressible alc 99.6 1.7E-17 5.8E-22 193.1 1.5 177 64-248 217-404 (727)
357 1o6v_A Internalin A; bacterial 99.6 6.5E-16 2.2E-20 171.2 12.5 164 67-242 195-360 (466)
358 3bz5_A Internalin-J, INLJ; leu 99.6 2.3E-15 8E-20 165.9 16.2 144 67-226 60-206 (457)
359 4ezg_A Putative uncharacterize 99.6 3.5E-16 1.2E-20 152.1 8.5 147 91-244 40-193 (197)
360 3bz5_A Internalin-J, INLJ; leu 99.6 2E-15 6.7E-20 166.5 15.4 162 67-245 81-243 (457)
361 1xeu_A Internalin C; cellular 99.6 2.2E-16 7.4E-21 160.9 6.8 148 67-226 37-187 (263)
362 4gyi_A RIO2 kinase; protein ki 99.6 1.7E-16 6E-21 167.5 6.2 144 434-594 89-264 (397)
363 1xeu_A Internalin C; cellular 99.6 7.1E-16 2.4E-20 157.1 10.4 160 71-244 19-184 (263)
364 1o6v_A Internalin A; bacterial 99.6 1.2E-15 3.9E-20 169.2 12.5 171 67-245 173-344 (466)
365 4fmz_A Internalin; leucine ric 99.6 1.1E-15 3.8E-20 162.4 11.8 168 67-245 151-321 (347)
366 1dce_A Protein (RAB geranylger 99.6 2.6E-17 9E-22 185.8 -1.1 153 70-228 348-550 (567)
367 1jl5_A Outer protein YOPM; leu 99.6 3.7E-15 1.3E-19 164.1 16.0 158 70-245 90-247 (454)
368 4fmz_A Internalin; leucine ric 99.6 1.1E-15 3.8E-20 162.4 11.1 163 67-241 128-293 (347)
369 2ca6_A RAN GTPase-activating p 99.6 1.4E-17 4.7E-22 180.0 -4.0 163 69-231 92-298 (386)
370 3g06_A SSPH2 (leucine-rich rep 99.6 1.5E-15 5.1E-20 172.7 12.2 138 68-224 37-174 (622)
371 3g06_A SSPH2 (leucine-rich rep 99.6 5.5E-15 1.9E-19 168.1 15.7 162 69-245 79-274 (622)
372 3g39_A Variable lymphocyte rec 99.6 2.5E-15 8.7E-20 142.2 10.7 108 98-206 12-119 (170)
373 2je0_A Acidic leucine-rich nuc 99.6 7.5E-16 2.6E-20 142.4 6.6 124 94-219 16-148 (149)
374 2ast_B S-phase kinase-associat 99.6 7.5E-17 2.6E-21 170.6 -1.5 174 71-245 70-257 (336)
375 2r9u_A Variable lymphocyte rec 99.6 5.2E-15 1.8E-19 140.6 10.8 108 98-206 15-122 (174)
376 2ca6_A RAN GTPase-activating p 99.6 9.7E-17 3.3E-21 173.3 -1.6 170 70-239 31-248 (386)
377 1a9n_A U2A', U2A'; complex (nu 99.6 4.1E-15 1.4E-19 141.7 7.8 130 68-203 16-154 (176)
378 2ast_B S-phase kinase-associat 99.5 2.7E-16 9.4E-21 166.3 -0.9 175 69-243 91-280 (336)
379 4ay9_X Follicle-stimulating ho 99.5 1.5E-14 5.2E-19 153.8 11.7 180 63-243 46-234 (350)
380 1ds9_A Outer arm dynein; leuci 99.5 4.7E-17 1.6E-21 158.4 -7.4 130 70-205 17-156 (198)
381 1a9n_A U2A', U2A'; complex (nu 99.5 4.7E-15 1.6E-19 141.3 6.0 132 89-224 13-153 (176)
382 3goz_A Leucine-rich repeat-con 99.5 9.4E-16 3.2E-20 164.0 -0.7 155 72-226 52-240 (362)
383 3goz_A Leucine-rich repeat-con 99.5 2.2E-15 7.6E-20 161.1 0.3 156 70-225 21-210 (362)
384 1dce_A Protein (RAB geranylger 99.5 4.5E-14 1.5E-18 159.4 10.6 118 96-218 442-567 (567)
385 1ds9_A Outer arm dynein; leuci 99.5 2.4E-16 8.1E-21 153.4 -8.6 145 91-240 14-179 (198)
386 3g39_A Variable lymphocyte rec 99.4 3.4E-13 1.2E-17 127.5 10.1 108 118-228 10-119 (170)
387 2r9u_A Variable lymphocyte rec 99.4 6.3E-13 2.2E-17 126.1 11.4 106 74-183 15-122 (174)
388 1z7x_W Ribonuclease inhibitor; 99.4 9.2E-15 3.2E-19 161.6 -2.5 175 70-244 198-410 (461)
389 1z7x_W Ribonuclease inhibitor; 99.4 8.1E-15 2.8E-19 162.0 -4.3 174 72-245 86-294 (461)
390 2ifg_A High affinity nerve gro 99.3 2.2E-12 7.5E-17 136.9 8.9 101 79-204 16-118 (347)
391 2ifg_A High affinity nerve gro 99.3 3.3E-12 1.1E-16 135.5 8.1 103 121-225 12-117 (347)
392 3tm0_A Aminoglycoside 3'-phosp 99.2 4.3E-11 1.5E-15 121.5 11.4 145 437-593 11-212 (263)
393 3un9_A NLR family member X1; l 99.2 4.6E-13 1.6E-17 143.1 -4.8 160 70-229 71-257 (372)
394 1nd4_A Aminoglycoside 3'-phosp 99.1 8.6E-11 2.9E-15 118.9 8.0 128 449-593 29-213 (264)
395 3sb4_A Hypothetical leucine ri 99.0 6.9E-10 2.4E-14 116.6 11.5 173 63-239 85-325 (329)
396 3dxp_A Putative acyl-COA dehyd 99.0 2E-09 6.8E-14 114.6 12.3 142 445-594 43-248 (359)
397 3un9_A NLR family member X1; l 98.9 1.5E-11 5.2E-16 131.3 -5.5 134 71-204 101-254 (372)
398 3ogk_B Coronatine-insensitive 98.9 2.5E-10 8.5E-15 130.1 2.1 128 69-197 110-251 (592)
399 3ogk_B Coronatine-insensitive 98.9 1.1E-10 3.8E-15 133.1 -1.0 167 72-239 139-322 (592)
400 3sb4_A Hypothetical leucine ri 98.9 3.8E-09 1.3E-13 110.9 9.2 169 70-242 48-304 (329)
401 3sg8_A APH(2'')-ID; antibiotic 98.8 1.3E-09 4.3E-14 113.2 4.0 187 445-646 25-287 (304)
402 3rw6_A Nuclear RNA export fact 98.7 4.7E-10 1.6E-14 112.8 -3.6 81 122-205 148-236 (267)
403 2p1m_B Transport inhibitor res 98.6 2.2E-09 7.6E-14 122.2 -2.9 130 69-199 103-245 (594)
404 2p1m_B Transport inhibitor res 98.6 1.7E-09 6E-14 123.1 -4.3 155 66-220 61-244 (594)
405 4fdw_A Leucine rich hypothetic 98.6 2.3E-07 7.9E-12 99.8 12.0 167 64-239 173-349 (401)
406 2ra8_A Uncharacterized protein 98.5 2.4E-08 8.3E-13 105.6 3.3 156 69-225 137-321 (362)
407 4fdw_A Leucine rich hypothetic 98.5 4.6E-07 1.6E-11 97.4 12.2 163 72-241 158-329 (401)
408 3r70_A Aminoglycoside phosphot 98.5 5.4E-07 1.8E-11 94.0 11.9 136 441-594 38-237 (320)
409 3rw6_A Nuclear RNA export fact 98.5 1.7E-08 5.9E-13 101.3 -0.3 106 137-242 137-258 (267)
410 2ra8_A Uncharacterized protein 98.4 6E-08 2E-12 102.6 0.8 155 65-222 166-341 (362)
411 1io0_A Tropomodulin; LRR prote 98.4 2E-08 6.7E-13 95.9 -2.7 63 139-201 91-163 (185)
412 1io0_A Tropomodulin; LRR prote 98.3 4.4E-08 1.5E-12 93.5 -0.8 110 69-178 34-164 (185)
413 3tdw_A Gentamicin resistance p 98.3 4E-06 1.4E-10 86.7 12.9 135 446-594 25-224 (306)
414 4gkh_A Aminoglycoside 3'-phosp 98.3 3.2E-06 1.1E-10 85.6 11.9 134 447-593 31-222 (272)
415 3d1u_A Putative fructosamine-3 98.2 6.4E-06 2.2E-10 84.2 12.5 75 445-525 20-97 (288)
416 3ovc_A Hygromycin-B 4-O-kinase 98.2 6.7E-06 2.3E-10 87.1 11.0 142 445-594 46-243 (362)
417 2q83_A YTAA protein; 2635576, 97.9 5.1E-05 1.7E-09 79.4 11.8 141 446-593 38-251 (346)
418 3ats_A Putative uncharacterize 97.9 5.1E-05 1.8E-09 80.1 11.8 81 446-526 26-121 (357)
419 2olc_A MTR kinase, methylthior 97.7 9.7E-05 3.3E-09 79.2 9.6 77 445-523 35-120 (397)
420 3jr1_A Putative fructosamine-3 97.6 0.00031 1E-08 72.4 12.2 138 446-590 42-232 (312)
421 3rfe_A Platelet glycoprotein I 97.5 9.5E-05 3.2E-09 65.5 5.7 56 99-154 12-68 (130)
422 3f7w_A Putative fructosamine-3 97.4 0.00062 2.1E-08 69.4 10.8 75 444-524 19-96 (288)
423 2pyw_A Uncharacterized protein 97.3 0.0008 2.7E-08 72.6 11.3 75 445-522 39-122 (420)
424 3csv_A Aminoglycoside phosphot 97.3 0.0011 3.8E-08 68.9 11.3 142 446-594 24-217 (333)
425 2ppq_A HSK, HK, homoserine kin 97.3 0.00047 1.6E-08 71.4 8.3 159 430-593 7-216 (322)
426 1zyl_A Hypothetical protein YI 97.2 0.003 1E-07 65.4 13.1 142 446-593 32-222 (328)
427 3dxq_A Choline/ethanolamine ki 97.1 0.0047 1.6E-07 63.2 13.4 71 445-525 23-95 (301)
428 1pgv_A TMD-1, tropomodulin TMD 97.1 9E-05 3.1E-09 70.3 0.3 62 140-201 97-169 (197)
429 4fs7_A Uncharacterized protein 96.9 0.0019 6.6E-08 68.9 9.4 124 69-199 69-195 (394)
430 4gt6_A Cell surface protein; l 96.9 0.0012 4.1E-08 70.6 7.1 145 73-224 244-391 (394)
431 4gt6_A Cell surface protein; l 96.7 0.0025 8.5E-08 68.1 8.2 104 117-224 265-370 (394)
432 1nw1_A Choline kinase (49.2 KD 96.7 0.0028 9.5E-08 68.5 8.6 70 446-523 79-157 (429)
433 3feg_A Choline/ethanolamine ki 96.7 0.0045 1.5E-07 65.4 10.0 141 446-593 56-253 (379)
434 4fs7_A Uncharacterized protein 96.7 0.0035 1.2E-07 66.8 9.3 158 71-238 230-391 (394)
435 3rfe_A Platelet glycoprotein I 96.7 0.0015 5.3E-08 57.6 5.3 56 145-202 12-68 (130)
436 3e4g_A ATP synthase subunit S, 96.7 0.00024 8.2E-09 66.0 -0.0 83 118-200 62-150 (176)
437 1pgv_A TMD-1, tropomodulin TMD 96.7 0.00016 5.3E-09 68.6 -1.7 87 138-224 67-170 (197)
438 4h09_A Hypothetical leucine ri 96.7 0.0037 1.3E-07 66.2 8.8 129 86-219 208-341 (379)
439 2qg7_A Ethanolamine kinase PV0 96.6 0.0092 3.1E-07 64.7 11.6 72 446-524 114-187 (458)
440 3e4g_A ATP synthase subunit S, 96.6 0.00062 2.1E-08 63.2 1.8 37 72-108 62-99 (176)
441 4h09_A Hypothetical leucine ri 96.3 0.006 2.1E-07 64.6 7.8 126 69-199 215-343 (379)
442 3c5i_A Choline kinase; choline 96.3 0.016 5.5E-07 61.0 10.7 72 446-524 39-120 (369)
443 3i1a_A Spectinomycin phosphotr 96.2 0.018 6.1E-07 59.9 10.3 31 564-594 206-236 (339)
444 2yle_A Protein spire homolog 1 96.0 0.043 1.5E-06 52.2 10.6 100 523-642 33-132 (229)
445 3f2s_A CK, chetk-alpha, cholin 95.7 0.03 1E-06 59.3 9.4 144 446-593 58-279 (401)
446 3mes_A Choline kinase; malaria 94.4 0.33 1.1E-05 51.8 13.0 72 446-524 76-156 (424)
447 2l2t_A Receptor tyrosine-prote 89.8 0.57 1.9E-05 31.9 4.7 24 302-325 16-39 (44)
448 2ks1_B Epidermal growth factor 87.9 0.56 1.9E-05 32.0 3.7 12 313-324 28-39 (44)
449 3g15_A CK, chetk-alpha, cholin 87.3 1.8 6E-05 45.8 9.4 28 566-593 246-279 (401)
450 4ann_A ESSB; membrane protein, 86.1 0.95 3.3E-05 42.9 5.7 116 495-647 42-158 (215)
451 4ano_A ESSB; membrane protein, 84.7 1.9 6.5E-05 41.0 7.0 114 496-647 48-163 (219)
452 2jwa_A Receptor tyrosine-prote 84.6 2.2 7.6E-05 28.9 5.2 6 319-324 34-39 (44)
453 3cxl_A N-chimerin; SH2, RHO-GA 84.0 0.11 3.9E-06 56.2 -2.0 60 445-507 147-213 (463)
454 2jo1_A Phospholemman; FXYD1, N 58.1 24 0.00083 26.2 5.6 25 299-323 19-43 (72)
455 2l8s_A Integrin alpha-1; trans 57.4 26 0.00089 24.8 5.5 23 297-319 11-33 (54)
456 2knc_A Integrin alpha-IIB; tra 55.8 37 0.0013 24.1 6.1 22 297-318 14-35 (54)
457 2l2t_A Receptor tyrosine-prote 47.8 21 0.0007 24.2 3.6 28 299-326 16-43 (44)
458 2ks1_B Epidermal growth factor 41.1 30 0.001 23.4 3.6 19 307-325 25-43 (44)
459 1cja_A Protein (actin-fragmin 40.9 1.3E+02 0.0044 30.3 9.8 135 449-594 78-237 (342)
460 2jp3_A FXYD domain-containing 39.0 31 0.0011 25.4 3.6 25 299-323 20-44 (67)
461 2k1a_A Integrin alpha-IIB; sin 33.0 66 0.0023 21.5 4.2 21 297-317 12-32 (42)
462 3ls8_A Phosphatidylinositol 3- 30.8 3E+02 0.01 30.3 11.5 46 541-593 454-501 (614)
463 2lz0_A Uncharacterized protein 27.3 1.3E+02 0.0043 24.3 6.1 38 135-173 14-51 (100)
464 2lz0_A Uncharacterized protein 26.5 84 0.0029 25.4 4.8 47 152-199 7-53 (100)
465 2zxe_G FXYD10, phospholemman-l 20.1 41 0.0014 25.3 1.4 20 299-318 22-41 (74)
466 2k9j_B Integrin beta-3; transm 20.1 1.5E+02 0.005 19.9 4.1 7 314-320 28-34 (43)
No 1
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=1.3e-53 Score=442.89 Aligned_cols=259 Identities=28% Similarity=0.400 Sum_probs=202.8
Q ss_pred cCCCCCCeeccCCCceEEEEEeCCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEee
Q 004994 440 NSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDY 519 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 519 (720)
+++...+.||+|+||+||+|++.+ .||||+++.........+.|.+|++++++++|||||+++|+|.+ +..+|||||
T Consensus 36 ~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmEy 112 (307)
T 3omv_A 36 SEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQW 112 (307)
T ss_dssp TSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEEC
T ss_pred HHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEEc
Confidence 456677899999999999998754 59999997554445556789999999999999999999999865 468999999
Q ss_pred CCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCC
Q 004994 520 GGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGS 599 (720)
Q Consensus 520 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~ 599 (720)
|++|+|.++++.. ...++|.++.+|+.|+|+||+|||+. +||||||||+|||+++++++||+|||+|+......
T Consensus 113 ~~gGsL~~~l~~~---~~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~ 186 (307)
T 3omv_A 113 CEGSSLYKHLHVQ---ETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWS 186 (307)
T ss_dssp CSSCBHHHHHHTS---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCSSCBC-----
T ss_pred CCCCCHHHHHhhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeeccCceecccCC
Confidence 9999999999643 34699999999999999999999987 89999999999999999999999999998775443
Q ss_pred CcccccCccccccCCCCccCC----CCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhc
Q 004994 600 TNELSEGLLTAHGSGAPEFES----GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMV 675 (720)
Q Consensus 600 ~~~~~~~~~~~~~~~aPE~~~----~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (720)
.........||+.|+|||++. +.|+.++|||||||+||||+||+.||......... .... .....
T Consensus 187 ~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~--~~~~---------~~~~~ 255 (307)
T 3omv_A 187 GSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQI--IFMV---------GRGYA 255 (307)
T ss_dssp -------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHH--HHHH---------HTTCC
T ss_pred cceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHH--HHHH---------hcCCC
Confidence 333344567999999999872 35899999999999999999999999754332111 1000 00111
Q ss_pred CCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 676 DPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 676 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
.|.+. ..+..+++++.+|+.+||+.||++||||.||+++|+.+
T Consensus 256 ~p~~~-~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l 298 (307)
T 3omv_A 256 SPDLS-KLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELL 298 (307)
T ss_dssp CCCST-TSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHH
T ss_pred CCCcc-cccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence 11111 12223456789999999999999999999999998764
No 2
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=5e-54 Score=447.86 Aligned_cols=256 Identities=25% Similarity=0.346 Sum_probs=209.1
Q ss_pred CCCCeeccCCCceEEEEEeC------CCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEE
Q 004994 443 SEGNFIGEGLLGSVYKAELP------GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLV 516 (720)
Q Consensus 443 ~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 516 (720)
...+.||+|+||+||+|.+. +++.||||+++... .....++|.+|++++++++|||||+++|+|.+.+..++|
T Consensus 29 ~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~-~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV 107 (308)
T 4gt4_A 29 RFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKA-EGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMI 107 (308)
T ss_dssp EEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-C-CC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEE
T ss_pred eEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECccc-ChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEEE
Confidence 34578999999999999762 46899999997543 344567899999999999999999999999999999999
Q ss_pred EeeCCCCCHHHHhhccc------------hhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCe
Q 004994 517 YDYGGNCTLHDLLHSDE------------EAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIV 584 (720)
Q Consensus 517 ~e~~~~gsL~~~l~~~~------------~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~ 584 (720)
||||++|+|.++++... .....++|..+.+|+.|+|+||+|||+. +||||||||+|||+++++++
T Consensus 108 ~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NILl~~~~~~ 184 (308)
T 4gt4_A 108 FSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNV 184 (308)
T ss_dssp EECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCE
T ss_pred EEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceEECCCCCE
Confidence 99999999999996432 1235689999999999999999999997 89999999999999999999
Q ss_pred EEccccCCCCCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcc
Q 004994 585 RVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAI 662 (720)
Q Consensus 585 kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~ 662 (720)
||+|||+|+.+.............+|+.|+|||.+ .+.|+.++|||||||+||||+| |+.||......+ +....
T Consensus 185 Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~---~~~~i- 260 (308)
T 4gt4_A 185 KISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQD---VVEMI- 260 (308)
T ss_dssp EECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHH---HHHHH-
T ss_pred EECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHH---HHHHH-
Confidence 99999999977554444444556789999999988 6789999999999999999999 899997643221 11111
Q ss_pred cccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 663 PRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
.... ....+..++.++.+|+.+||+.||++||||+||+++|+.+
T Consensus 261 ------------~~~~-~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~ 304 (308)
T 4gt4_A 261 ------------RNRQ-VLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW 304 (308)
T ss_dssp ------------HTTC-CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred ------------HcCC-CCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 1100 0011234456789999999999999999999999999864
No 3
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=2.4e-54 Score=448.30 Aligned_cols=258 Identities=23% Similarity=0.384 Sum_probs=209.2
Q ss_pred cCCCCCCeeccCCCceEEEEEeC------CCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAELP------GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQH 513 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~ 513 (720)
++|...+.||+|+||+||+|++. ++..||||+++.. .....++|.+|++++++++|||||+++|+|.+.+..
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~--~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~ 90 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA--SDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPL 90 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCC--ChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEE
Confidence 45667789999999999999763 4789999999753 234567899999999999999999999999999999
Q ss_pred EEEEeeCCCCCHHHHhhccc---------hhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCe
Q 004994 514 LLVYDYGGNCTLHDLLHSDE---------EAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIV 584 (720)
Q Consensus 514 ~lv~e~~~~gsL~~~l~~~~---------~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~ 584 (720)
++|||||++|+|.++++... .....++|.++.+|+.|+|+||+|||+. +||||||||+|||+++++++
T Consensus 91 ~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~~~~ 167 (299)
T 4asz_A 91 IMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLV 167 (299)
T ss_dssp EEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCE
T ss_pred EEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCCCcE
Confidence 99999999999999997532 1235799999999999999999999987 89999999999999999999
Q ss_pred EEccccCCCCCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcc
Q 004994 585 RVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAI 662 (720)
Q Consensus 585 kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~ 662 (720)
||+|||+|+...............+|+.|+|||.+ .+.|+.++|||||||++|||+| |+.||......+ +...
T Consensus 168 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~---~~~~-- 242 (299)
T 4asz_A 168 KIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE---VIEC-- 242 (299)
T ss_dssp EECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH---HHHH--
T ss_pred EECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH---HHHH--
Confidence 99999999876544333344456689999999998 6789999999999999999999 999997643221 1111
Q ss_pred cccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 663 PRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
+.... ....+..+++++.+|+.+||+.||++||||+||++.|+++
T Consensus 243 -----------i~~~~-~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~ 287 (299)
T 4asz_A 243 -----------ITQGR-VLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNL 287 (299)
T ss_dssp -----------HHHTC-CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred -----------HHcCC-CCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 00000 0011223456789999999999999999999999999875
No 4
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=9.3e-54 Score=450.06 Aligned_cols=258 Identities=24% Similarity=0.383 Sum_probs=201.6
Q ss_pred cCCCCCCeeccCCCceEEEEEeC------CCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAELP------GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQH 513 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~ 513 (720)
++|...+.||+|+||+||+|++. +++.||||+++.. .....++|.+|+++|++++|||||+++|+|.+.+..
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~--~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~ 118 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA--SESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPL 118 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCC--SHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcC--CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEE
Confidence 34556688999999999999764 4789999999753 244567899999999999999999999999999999
Q ss_pred EEEEeeCCCCCHHHHhhccch-----------hccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCC
Q 004994 514 LLVYDYGGNCTLHDLLHSDEE-----------AHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKL 582 (720)
Q Consensus 514 ~lv~e~~~~gsL~~~l~~~~~-----------~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~ 582 (720)
+||||||++|+|.++++.... ....++|.++++|+.|+|+||+|||+. +||||||||+|||+++++
T Consensus 119 ~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~~~~ 195 (329)
T 4aoj_A 119 LMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVGQGL 195 (329)
T ss_dssp EEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTT
T ss_pred EEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEECCCC
Confidence 999999999999999975321 234689999999999999999999987 899999999999999999
Q ss_pred CeEEccccCCCCCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhh
Q 004994 583 IVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRW 660 (720)
Q Consensus 583 ~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~ 660 (720)
++||+|||+|+.+.............+|+.|+|||++ .+.|+.++|||||||++|||+| |+.||........ ...
T Consensus 196 ~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~---~~~ 272 (329)
T 4aoj_A 196 VVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEA---IDC 272 (329)
T ss_dssp EEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHH---HHH
T ss_pred cEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHHH---HHH
Confidence 9999999999987554444444456789999999998 5679999999999999999999 9999975432211 111
Q ss_pred cccccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 661 AIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
. .+-..+. .+..+++++.+|+.+||+.||++||||+||+++|+.|
T Consensus 273 i----------~~g~~~~----~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l 317 (329)
T 4aoj_A 273 I----------TQGRELE----RPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQAL 317 (329)
T ss_dssp H----------HHTCCCC----CCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHH
T ss_pred H----------HcCCCCC----CcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHH
Confidence 0 0000111 1223456789999999999999999999999999976
No 5
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=6.7e-52 Score=426.84 Aligned_cols=249 Identities=23% Similarity=0.341 Sum_probs=200.0
Q ss_pred CCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEecc----CCeEEEEE
Q 004994 443 SEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNE----HGQHLLVY 517 (720)
Q Consensus 443 ~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~----~~~~~lv~ 517 (720)
...+.||+|+||+||+|.. .++..||||++..........+.|.+|++++++++|||||+++++|.+ .+..|+||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 3346799999999999965 568999999997655455566789999999999999999999999864 34689999
Q ss_pred eeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcC-CCCeEEccccCCCCCC
Q 004994 518 DYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDE-KLIVRVSDCGLAPLLF 596 (720)
Q Consensus 518 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~-~~~~kl~DFGla~~~~ 596 (720)
|||++|+|.+++.. ...+++.....++.|++.||+|||+. .++||||||||+|||++. ++++||+|||+|+...
T Consensus 109 Ey~~gg~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~ylH~~-~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~ 183 (290)
T 3fpq_A 109 ELMTSGTLKTYLKR----FKVMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR 183 (290)
T ss_dssp ECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred eCCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC-CCCEEecccChhheeEECCCCCEEEEeCcCCEeCC
Confidence 99999999999953 45789999999999999999999986 224999999999999984 7999999999998653
Q ss_pred CCCCcccccCccccccCCCCccCCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcC
Q 004994 597 SGSTNELSEGLLTAHGSGAPEFESGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVD 676 (720)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (720)
.. ......||+.|+|||.+.+.|+.++|||||||++|||+||+.||........ +. ..+..
T Consensus 184 ~~----~~~~~~GTp~YmAPE~~~~~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~--~~-------------~~i~~ 244 (290)
T 3fpq_A 184 AS----FAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQ--IY-------------RRVTS 244 (290)
T ss_dssp TT----SBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHH--HH-------------HHHTT
T ss_pred CC----ccCCcccCccccCHHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHH--HH-------------HHHHc
Confidence 22 2334679999999999988899999999999999999999999965332111 11 11111
Q ss_pred CCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 677 PSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 677 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.......+...++++.+|+.+||+.||++|||++|+++|
T Consensus 245 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~H 283 (290)
T 3fpq_A 245 GVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp TCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred CCCCCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 111111222334578899999999999999999999875
No 6
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=2.8e-52 Score=438.77 Aligned_cols=252 Identities=21% Similarity=0.322 Sum_probs=201.3
Q ss_pred cCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEe
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYD 518 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 518 (720)
++|+..+.||+|+||+||+|+. .+|+.||||++.+........+.|.+|++++++++|||||++++++.+.+..|+|||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE 103 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD 103 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence 5788899999999999999965 579999999997665445566789999999999999999999999999999999999
Q ss_pred eCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCC
Q 004994 519 YGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSG 598 (720)
Q Consensus 519 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~ 598 (720)
||++|+|.+++... ....+++.....++.|++.||+|||+. +||||||||+|||++.++++||+|||+|+.+...
T Consensus 104 y~~gg~L~~~i~~~--~~~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 178 (350)
T 4b9d_A 104 YCEGGDLFKRINAQ--KGVLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST 178 (350)
T ss_dssp CCTTCBHHHHHHHT--TTCCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTTEESCCCHH
T ss_pred CCCCCcHHHHHHHc--CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEcccccceeecCC
Confidence 99999999999632 234578888999999999999999997 9999999999999999999999999999876422
Q ss_pred CCcccccCccccccCCCCccCC-CCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcCC
Q 004994 599 STNELSEGLLTAHGSGAPEFES-GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDP 677 (720)
Q Consensus 599 ~~~~~~~~~~~~~~~~aPE~~~-~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (720)
........||+.|+|||.+. ..|+.++|||||||++|||+||+.||......... .++...
T Consensus 179 --~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~----------------~~i~~~ 240 (350)
T 4b9d_A 179 --VELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLV----------------LKIISG 240 (350)
T ss_dssp --HHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH----------------HHHHHT
T ss_pred --cccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHH----------------HHHHcC
Confidence 12233467999999999984 46999999999999999999999999754322111 111110
Q ss_pred CCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 678 SLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 678 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
... ..+...+.++.+|+.+||++||++|||++|++++
T Consensus 241 ~~~-~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h 277 (350)
T 4b9d_A 241 SFP-PVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEK 277 (350)
T ss_dssp CCC-CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred CCC-CCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 000 0111234678899999999999999999999874
No 7
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=6.8e-52 Score=439.36 Aligned_cols=266 Identities=24% Similarity=0.375 Sum_probs=212.8
Q ss_pred HHHHhcCCCCCCeeccCCCceEEEEEeCC------CcEEEEEEecccccccccHHHHHHHHHHHHccCC-CceeEEEeEe
Q 004994 435 LQQYTNSFSEGNFIGEGLLGSVYKAELPG------GKLLAVKKLSNTVSQRQTDEEFLELASTISRLRH-GNIVELIGYC 507 (720)
Q Consensus 435 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~------g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H-~niv~l~~~~ 507 (720)
.+...++|+..+.||+|+||+||+|.+.. ++.||||++..... ....++|.+|+++|++++| ||||+++|+|
T Consensus 59 wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~-~~~~~~~~~E~~il~~l~hhpnIV~l~g~~ 137 (353)
T 4ase_A 59 WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT-HSEHRALMSELKILIHIGHHLNVVNLLGAC 137 (353)
T ss_dssp HBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCC-HHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred cEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccC-hHHHHHHHHHHHHHHHcCCCCcEEEEEEEE
Confidence 33345778889999999999999996532 46899999975432 3445789999999999965 8999999999
Q ss_pred cc-CCeEEEEEeeCCCCCHHHHhhccch------------hccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCC
Q 004994 508 NE-HGQHLLVYDYGGNCTLHDLLHSDEE------------AHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSS 574 (720)
Q Consensus 508 ~~-~~~~~lv~e~~~~gsL~~~l~~~~~------------~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~ 574 (720)
.+ .+..++|||||++|+|.++++.... ....++|..+..++.|||+||+|||+. +||||||||+
T Consensus 138 ~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHRDLK~~ 214 (353)
T 4ase_A 138 TKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAAR 214 (353)
T ss_dssp CCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGG
T ss_pred EecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecCccCcc
Confidence 76 4578999999999999999975322 134589999999999999999999997 8999999999
Q ss_pred CeEEcCCCCeEEccccCCCCCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCc
Q 004994 575 NILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPR 652 (720)
Q Consensus 575 NiLl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~ 652 (720)
|||+++++++||+|||+|+.+.............+|+.|+|||.+ .+.|+.++|||||||+||||+| |+.||......
T Consensus 215 NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~ 294 (353)
T 4ase_A 215 NILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID 294 (353)
T ss_dssp GEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS
T ss_pred ceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHH
Confidence 999999999999999999987655444444556789999999998 6789999999999999999998 99999754322
Q ss_pred cccchhhhcccccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhC
Q 004994 653 GEQSLVRWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCMI 720 (720)
Q Consensus 653 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~ 720 (720)
.. +... +.+-..+. .+..+++++.+++.+||+.||++|||++||+++|+++|
T Consensus 295 ~~--~~~~----------i~~g~~~~----~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~ll 346 (353)
T 4ase_A 295 EE--FCRR----------LKEGTRMR----APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 346 (353)
T ss_dssp HH--HHHH----------HHHTCCCC----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HH--HHHH----------HHcCCCCC----CCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHH
Confidence 11 1110 00000111 12223467889999999999999999999999999874
No 8
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=3.1e-51 Score=430.17 Aligned_cols=249 Identities=24% Similarity=0.353 Sum_probs=205.1
Q ss_pred cCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEe
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYD 518 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 518 (720)
+.|+..+.||+|+||+||+|.. .+|+.||||++.... ....+.+.+|+++|++++|||||+++++|.+.+..|||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~--~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmE 151 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRK--QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVME 151 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGG--CSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCc--hhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence 4688889999999999999965 579999999996432 2334568899999999999999999999999999999999
Q ss_pred eCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCC
Q 004994 519 YGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSG 598 (720)
Q Consensus 519 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~ 598 (720)
||++|+|.+++.. ..+++.....++.|++.||+|||+. +||||||||+|||++.++++||+|||+|+.+...
T Consensus 152 y~~gg~L~~~l~~-----~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 223 (346)
T 4fih_A 152 FLEGGALTDIVTH-----TRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE 223 (346)
T ss_dssp CCTTEEHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSS
T ss_pred CCCCCcHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCceecCCC
Confidence 9999999998852 4589999999999999999999997 9999999999999999999999999999876433
Q ss_pred CCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcCC
Q 004994 599 STNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDP 677 (720)
Q Consensus 599 ~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (720)
. .......||+.|+|||.+ ...|+.++|||||||++|||+||+.||...........+ .....+
T Consensus 224 ~--~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i-------------~~~~~~ 288 (346)
T 4fih_A 224 V--PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI-------------RDNLPP 288 (346)
T ss_dssp S--CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH-------------HHSSCC
T ss_pred C--CcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHH-------------HcCCCC
Confidence 2 223456899999999998 457999999999999999999999999754322111111 111111
Q ss_pred CCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 678 SLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 678 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.+. .....++++.+|+.+||++||++|||++|+++|
T Consensus 289 ~~~--~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~H 324 (346)
T 4fih_A 289 RLK--NLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 324 (346)
T ss_dssp CCS--CGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred CCC--ccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 111 122344678899999999999999999999875
No 9
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=4.9e-51 Score=426.22 Aligned_cols=268 Identities=22% Similarity=0.246 Sum_probs=199.9
Q ss_pred CCCCCCeeccCCCceEEEEEeCCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCC----eEEEE
Q 004994 441 SFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHG----QHLLV 516 (720)
Q Consensus 441 ~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~----~~~lv 516 (720)
+|...+.||+|+||+||+|++ +|+.||||++.... .....+..|+..+.+++|||||+++|+|.+.+ ..+||
T Consensus 4 ~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~---~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV 79 (303)
T 3hmm_A 4 TIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV 79 (303)
T ss_dssp GEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred EEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccc---hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEE
Confidence 456678999999999999987 58999999996431 11222334556667889999999999997653 68999
Q ss_pred EeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhc-----CCCCeeecCCCCCCeEEcCCCCeEEccccC
Q 004994 517 YDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEV-----CEPPIVHGNFKSSNILLDEKLIVRVSDCGL 591 (720)
Q Consensus 517 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~-----~~~~ivHrDlkp~NiLl~~~~~~kl~DFGl 591 (720)
||||++|+|.++++. ..++|..+.+++.|+|+||+|||+. +.++||||||||+|||+|.++++||+|||+
T Consensus 80 ~Ey~~~gsL~~~l~~-----~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGl 154 (303)
T 3hmm_A 80 SDYHEHGSLFDYLNR-----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL 154 (303)
T ss_dssp EECCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTT
T ss_pred ecCCCCCcHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCC
Confidence 999999999999953 4689999999999999999999975 356899999999999999999999999999
Q ss_pred CCCCCCCCCcc--cccCccccccCCCCccCCC-------CCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcc
Q 004994 592 APLLFSGSTNE--LSEGLLTAHGSGAPEFESG-------SYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAI 662 (720)
Q Consensus 592 a~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~-------~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~ 662 (720)
|+......... ......||++|+|||++.+ .|+.++|||||||++|||+||+.||......... ...+..
T Consensus 155 a~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p-~~~~~~ 233 (303)
T 3hmm_A 155 AVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLP-YYDLVP 233 (303)
T ss_dssp CEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCT-TTTTSC
T ss_pred CccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCcccccccc-chhccc
Confidence 98765433211 2234578999999998844 3677999999999999999999887543221110 000000
Q ss_pred cccCchhh-----hhhhcCCCCCchh-hHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 663 PRLHDIDA-----LSRMVDPSLDGAY-LAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 663 ~~~~~~~~-----~~~~~~~~~~~~~-~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
.-...+. ..+..+|.++... ..+++..+.+|+.+||+.||++||||.||++.|++|
T Consensus 234 -~~~~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l 295 (303)
T 3hmm_A 234 -SDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQL 295 (303)
T ss_dssp -SSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHH
T ss_pred -ccchHHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHH
Confidence 0001111 1122234443332 235667889999999999999999999999999876
No 10
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=2.8e-51 Score=429.34 Aligned_cols=251 Identities=20% Similarity=0.192 Sum_probs=200.8
Q ss_pred cCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEe
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYD 518 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 518 (720)
+.|...++||+|+||+||+|+. .+|+.||||+++.... +.+|++++++++|||||++++++.+.+..|||||
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-------~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmE 130 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-------RVEELVACAGLSSPRIVPLYGAVREGPWVNIFME 130 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-------CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-------HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence 3566678899999999999965 5799999999975422 2468999999999999999999999999999999
Q ss_pred eCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCC-CeEEccccCCCCCCC
Q 004994 519 YGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKL-IVRVSDCGLAPLLFS 597 (720)
Q Consensus 519 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~-~~kl~DFGla~~~~~ 597 (720)
||++|+|.++++. ...+++.....++.|++.||+|||+. +||||||||+|||++.++ ++||+|||+|+.+..
T Consensus 131 y~~gg~L~~~l~~----~~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~ 203 (336)
T 4g3f_A 131 LLEGGSLGQLIKQ----MGCLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQP 203 (336)
T ss_dssp CCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTTCEEC--
T ss_pred ccCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCCCeEccC
Confidence 9999999999953 35689999999999999999999987 999999999999999988 699999999987754
Q ss_pred CCCc---ccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhh
Q 004994 598 GSTN---ELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSR 673 (720)
Q Consensus 598 ~~~~---~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (720)
.... .......||+.|+|||.+ ...|+.++|||||||++|||+||+.||...........+....+ ...
T Consensus 204 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~------~~~- 276 (336)
T 4g3f_A 204 DGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPP------PIR- 276 (336)
T ss_dssp ----------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHSCC------GGG-
T ss_pred CCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHcCCC------Cch-
Confidence 3221 122345799999999998 45699999999999999999999999976443221111110000 000
Q ss_pred hcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 674 MVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 674 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
..+..+++++.+++.+||++||++|||+.|++++|...
T Consensus 277 --------~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~ 314 (336)
T 4g3f_A 277 --------EIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKA 314 (336)
T ss_dssp --------GSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred --------hcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHH
Confidence 11223346788999999999999999999999998764
No 11
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=1.7e-51 Score=425.80 Aligned_cols=249 Identities=20% Similarity=0.281 Sum_probs=206.7
Q ss_pred cCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccc-cccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTV-SQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVY 517 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~-~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 517 (720)
++|+..+.||+|+||+||+|.. .+|+.||||++.+.. ......+.+.+|++++++++|||||++++++.+.+..|+||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 4688899999999999999965 679999999997542 23345678999999999999999999999999999999999
Q ss_pred eeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCC
Q 004994 518 DYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFS 597 (720)
Q Consensus 518 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~ 597 (720)
||+++|+|.+++.. ...+++.....++.|++.||+|||+. +||||||||+|||++.++++||+|||+|+.+..
T Consensus 112 Ey~~gG~L~~~i~~----~~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~ 184 (311)
T 4aw0_A 112 SYAKNGELLKYIRK----IGSFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSP 184 (311)
T ss_dssp CCCTTEEHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred ecCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcCCceecCC
Confidence 99999999999953 35689999999999999999999997 999999999999999999999999999998765
Q ss_pred CCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcC
Q 004994 598 GSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVD 676 (720)
Q Consensus 598 ~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (720)
...........||+.|+|||.+ ...|+.++||||+||++|||+||+.||...+.......+. . .+
T Consensus 185 ~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~------------~--~~ 250 (311)
T 4aw0_A 185 ESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKII------------K--LE 250 (311)
T ss_dssp TTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH------------H--TC
T ss_pred CCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH------------c--CC
Confidence 4444445567899999999998 5579999999999999999999999997543221111000 0 00
Q ss_pred CCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHH
Q 004994 677 PSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIV 713 (720)
Q Consensus 677 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl 713 (720)
..+ +...++++.+|+.+||++||++|||++|++
T Consensus 251 ~~~----p~~~s~~~~dli~~lL~~dp~~R~t~~e~~ 283 (311)
T 4aw0_A 251 YDF----PEKFFPKARDLVEKLLVLDATKRLGCEEME 283 (311)
T ss_dssp CCC----CTTCCHHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred CCC----CcccCHHHHHHHHHHccCCHhHCcChHHHc
Confidence 111 122345788999999999999999999864
No 12
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=4.8e-50 Score=409.31 Aligned_cols=247 Identities=26% Similarity=0.344 Sum_probs=188.7
Q ss_pred cCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEeccccc-ccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVS-QRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVY 517 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 517 (720)
++|+..+.||+|+||+||+|.. .+|+.||||++.+... .....+.+.+|++++++++|||||++++++.+.+..|+||
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 92 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 5799999999999999999965 5799999999975432 2344567999999999999999999999999999999999
Q ss_pred eeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCC
Q 004994 518 DYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFS 597 (720)
Q Consensus 518 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~ 597 (720)
||+ +|+|.+++.. ...+++.....++.|++.||+|||+. +||||||||+|||+++++++||+|||+|+....
T Consensus 93 Ey~-~g~L~~~l~~----~~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~ 164 (275)
T 3hyh_A 93 EYA-GNELFDYIVQ----RDKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD 164 (275)
T ss_dssp ECC-CEEHHHHHHH----SCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCSSCC-----
T ss_pred eCC-CCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeecCCCeecCC
Confidence 999 5799998853 35689999999999999999999997 999999999999999999999999999987643
Q ss_pred CCCcccccCccccccCCCCccCCC-CC-CCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhc
Q 004994 598 GSTNELSEGLLTAHGSGAPEFESG-SY-SCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMV 675 (720)
Q Consensus 598 ~~~~~~~~~~~~~~~~~aPE~~~~-~~-~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (720)
.. ......||+.|+|||.+.+ .| +.++||||+||++|||+||+.||...........+...
T Consensus 165 ~~---~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~~~-------------- 227 (275)
T 3hyh_A 165 GN---FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNG-------------- 227 (275)
T ss_dssp -------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT--------------
T ss_pred CC---ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcC--------------
Confidence 22 2334679999999999854 44 68999999999999999999999753321111101000
Q ss_pred CCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 676 DPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 676 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
...+ +...++++.+|+.+||+.||++|||++|+++|
T Consensus 228 ~~~~----p~~~s~~~~~li~~~L~~dP~~R~s~~eil~h 263 (275)
T 3hyh_A 228 VYTL----PKFLSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp CCCC----CTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHC
T ss_pred CCCC----CCCCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence 0111 11234678899999999999999999999975
No 13
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=4.8e-50 Score=431.42 Aligned_cols=250 Identities=24% Similarity=0.352 Sum_probs=205.5
Q ss_pred hcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEE
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVY 517 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 517 (720)
.+.|+..+.||+|+||+||+|.. .+|+.||||++.... ....+.+.+|+++|++++|||||+++++|.+.+.+||||
T Consensus 150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~--~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVm 227 (423)
T 4fie_A 150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRK--QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVM 227 (423)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTT--CSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccc--hhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEE
Confidence 35688889999999999999965 579999999997442 233457889999999999999999999999999999999
Q ss_pred eeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCC
Q 004994 518 DYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFS 597 (720)
Q Consensus 518 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~ 597 (720)
|||++|+|.+++.. ..+++.....++.|++.||+|||+. +||||||||+||||+.++++||+|||+|+.+..
T Consensus 228 Ey~~gG~L~~~i~~-----~~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~ 299 (423)
T 4fie_A 228 EFLEGGALTDIVTH-----TRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK 299 (423)
T ss_dssp ECCTTEEHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCEECCS
T ss_pred eCCCCCcHHHHHhc-----cCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccceECCC
Confidence 99999999999852 3589999999999999999999997 999999999999999999999999999987643
Q ss_pred CCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcC
Q 004994 598 GSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVD 676 (720)
Q Consensus 598 ~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (720)
.. .......||++|||||.+ ...|+.++|||||||++|||++|+.||...........+ .....
T Consensus 300 ~~--~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i-------------~~~~~ 364 (423)
T 4fie_A 300 EV--PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI-------------RDNLP 364 (423)
T ss_dssp SC--CCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH-------------HHSCC
T ss_pred CC--ccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHH-------------HcCCC
Confidence 32 233457899999999998 457999999999999999999999999754322211111 11111
Q ss_pred CCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 677 PSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 677 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
+.+. .....++++.+|+.+||++||++|||++|+++|
T Consensus 365 ~~~~--~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~H 401 (423)
T 4fie_A 365 PRLK--NLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 401 (423)
T ss_dssp CCCS--CTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred CCCc--ccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 1111 112234678899999999999999999999875
No 14
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=1.7e-50 Score=418.43 Aligned_cols=249 Identities=21% Similarity=0.258 Sum_probs=196.1
Q ss_pred cCCCCCCeeccCCCceEEEEEe----CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL----PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLL 515 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~----~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~l 515 (720)
++|+..+.||+|+||+||+|+. .+++.||||++.+..........+.+|++++++++|||||++++++.+.+..|+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 4688889999999999999965 247899999997654444444578899999999999999999999999999999
Q ss_pred EEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCC
Q 004994 516 VYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLL 595 (720)
Q Consensus 516 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~ 595 (720)
||||+++|+|.+++.. ...+++.....++.|++.||+|||+. +||||||||+|||++.++++||+|||+|+..
T Consensus 104 vmEy~~gg~L~~~l~~----~~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~ 176 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSK----EVMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKES 176 (304)
T ss_dssp EECCCTTCEEHHHHHH----HCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEESSEEEEC-
T ss_pred EEEcCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEecccccceec
Confidence 9999999999999953 35689999999999999999999997 9999999999999999999999999999875
Q ss_pred CCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhh
Q 004994 596 FSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRM 674 (720)
Q Consensus 596 ~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (720)
.... .......||+.|+|||.+ ...|+.++|||||||++|||+||+.||...+.......+
T Consensus 177 ~~~~--~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i---------------- 238 (304)
T 3ubd_A 177 IDHE--KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMI---------------- 238 (304)
T ss_dssp ------CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH----------------
T ss_pred cCCC--ccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHHH----------------
Confidence 4322 223346799999999998 567999999999999999999999999754322111111
Q ss_pred cCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCC-----HHHHHHH
Q 004994 675 VDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPP-----MSEIVQD 715 (720)
Q Consensus 675 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt-----~~evl~~ 715 (720)
..... ..+...++++.+|+.+||++||++||| ++|+++|
T Consensus 239 ~~~~~--~~p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~H 282 (304)
T 3ubd_A 239 LKAKL--GMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRH 282 (304)
T ss_dssp HHCCC--CCCTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTS
T ss_pred HcCCC--CCCCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcC
Confidence 10000 011223467889999999999999998 4677753
No 15
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=3.6e-48 Score=402.59 Aligned_cols=253 Identities=19% Similarity=0.311 Sum_probs=188.3
Q ss_pred hcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCC------
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHG------ 511 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~------ 511 (720)
.++|+..+.||+|+||+||+|+. .+|+.||||++.... .....+.+.+|++++++++|||||++++++.+.+
T Consensus 4 l~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~-~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~ 82 (299)
T 4g31_A 4 LTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPN-RELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQ 82 (299)
T ss_dssp HHHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECS-SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC------
T ss_pred chhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccC-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccc
Confidence 34688889999999999999965 579999999996432 2344567999999999999999999999986433
Q ss_pred ------eEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeE
Q 004994 512 ------QHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVR 585 (720)
Q Consensus 512 ------~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~k 585 (720)
..|+||||+++|+|.+++.... ......+.....++.|+++||+|||+. +||||||||+|||++.++++|
T Consensus 83 ~~~~~~~l~ivmE~~~gg~L~~~l~~~~-~~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~vK 158 (299)
T 4g31_A 83 PSSPKVYLYIQMQLCRKENLKDWMNGRC-TIEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVK 158 (299)
T ss_dssp ----CEEEEEEEECCCSCCHHHHHHTCC-SGGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEE
T ss_pred ccCCCcEEEEEEecCCCCcHHHHHHhcC-CCChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcEE
Confidence 4789999999999999997532 223456777889999999999999997 999999999999999999999
Q ss_pred EccccCCCCCCCCCCcc----------cccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccc
Q 004994 586 VSDCGLAPLLFSGSTNE----------LSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGE 654 (720)
Q Consensus 586 l~DFGla~~~~~~~~~~----------~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~ 654 (720)
|+|||+|+.+....... ......||+.|+|||.+ ...|+.++|||||||++|||++ ||..... .
T Consensus 159 l~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~--~ 233 (299)
T 4g31_A 159 VGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQME--R 233 (299)
T ss_dssp ECCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHH--H
T ss_pred EccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccH--H
Confidence 99999998875432111 12235699999999998 4579999999999999999996 7753110 0
Q ss_pred cchhhhcccccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 655 QSLVRWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 655 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
...+..+.....+. ......+.+.+|+.+||+.||++|||+.|++++
T Consensus 234 -------------~~~~~~~~~~~~p~-~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 280 (299)
T 4g31_A 234 -------------VRTLTDVRNLKFPP-LFTQKYPCEYVMVQDMLSPSPMERPEAINIIEN 280 (299)
T ss_dssp -------------HHHHHHHHTTCCCH-HHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred -------------HHHHHHHhcCCCCC-CCcccCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 00111111112211 122334567789999999999999999999874
No 16
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=6.1e-47 Score=408.36 Aligned_cols=268 Identities=19% Similarity=0.311 Sum_probs=203.1
Q ss_pred cCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEecc------CCe
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNE------HGQ 512 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~------~~~ 512 (720)
++|...+.||+|+||+||+|.. .+|+.||||++++........+.+.+|+++|++++|||||++++++.. .+.
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 5788899999999999999965 679999999998665545556788999999999999999999998753 467
Q ss_pred EEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCC
Q 004994 513 HLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLA 592 (720)
Q Consensus 513 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla 592 (720)
.|+|||||+ |+|.+++.. ...+++.....++.|++.||+|||+. +||||||||+|||++.++.+||+|||+|
T Consensus 134 ~~ivmE~~~-g~L~~~i~~----~~~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DFGla 205 (398)
T 4b99_A 134 VYVVLDLME-SDLHQIIHS----SQPLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMA 205 (398)
T ss_dssp EEEEEECCS-EEHHHHHTS----SSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEeCCC-CCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeeccee
Confidence 899999996 689998854 35789999999999999999999997 9999999999999999999999999999
Q ss_pred CCCCCCC--CcccccCccccccCCCCccCCC--CCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCc-
Q 004994 593 PLLFSGS--TNELSEGLLTAHGSGAPEFESG--SYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHD- 667 (720)
Q Consensus 593 ~~~~~~~--~~~~~~~~~~~~~~~aPE~~~~--~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~- 667 (720)
+.+.... .........||++|+|||.+.+ .|+.++||||+||++|||+||+.||...+.......+.........
T Consensus 206 ~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~ 285 (398)
T 4b99_A 206 RGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPA 285 (398)
T ss_dssp BCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGG
T ss_pred eecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChH
Confidence 8774332 1223345789999999998743 4799999999999999999999999765432221111100000000
Q ss_pred ---------hhhhhhhcCCCCCc---hhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 668 ---------IDALSRMVDPSLDG---AYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 668 ---------~~~~~~~~~~~~~~---~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.........+.... ........++.+|+.+||+.||++|||++|+++|
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 345 (398)
T 4b99_A 286 VIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH 345 (398)
T ss_dssp GTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred HhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 00000001111000 0011124578899999999999999999999875
No 17
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=1.2e-45 Score=390.59 Aligned_cols=283 Identities=33% Similarity=0.555 Sum_probs=233.8
Q ss_pred CHHHHHHHhcCCCCCCeeccCCCceEEEEEeCCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccC
Q 004994 431 TIASLQQYTNSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEH 510 (720)
Q Consensus 431 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~ 510 (720)
...++...+++|...+.||+|+||+||+|...+|+.||||++.... ....+.+.+|++++++++||||+++++++.+.
T Consensus 30 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 107 (321)
T 2qkw_B 30 PLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPES--SQGIEEFETEIETLSFCRHPHLVSLIGFCDER 107 (321)
T ss_dssp CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCC--SSHHHHHHHHHHGGGSCCCTTBCCEEEECCCT
T ss_pred cHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccC--hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCC
Confidence 3445556788999999999999999999998889999999987542 34457899999999999999999999999999
Q ss_pred CeEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEcccc
Q 004994 511 GQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCG 590 (720)
Q Consensus 511 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFG 590 (720)
+..++||||+++|+|.+++.........++|..+..++.++++||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 108 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg 184 (321)
T 2qkw_B 108 NEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFG 184 (321)
T ss_dssp TCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCEEECCCT
T ss_pred CeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCEEEeecc
Confidence 999999999999999999976544445689999999999999999999997 99999999999999999999999999
Q ss_pred CCCCCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchh
Q 004994 591 LAPLLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDID 669 (720)
Q Consensus 591 la~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 669 (720)
+++...............++..|+|||.. .+.++.++|||||||++|||+||+.||....+........|..... ...
T Consensus 185 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~-~~~ 263 (321)
T 2qkw_B 185 ISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESH-NNG 263 (321)
T ss_dssp TCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHH-TTT
T ss_pred cccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhcc-ccc
Confidence 99865433333333445688999999988 6679999999999999999999999998765554444444432111 112
Q ss_pred hhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 670 ALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 670 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
.+...+++........+.+..+.+++.+||+.||++|||++|++++|+.+
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~ 313 (321)
T 2qkw_B 264 QLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYA 313 (321)
T ss_dssp CCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred cHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence 23444555555555667888999999999999999999999999999975
No 18
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=1.1e-45 Score=394.43 Aligned_cols=200 Identities=24% Similarity=0.323 Sum_probs=169.2
Q ss_pred HHhcCCCCCCeeccCCCceEEEEEeC----CCcEEEEEEecccccccccHHHHHHHHHHHHcc-CCCceeEEEeEeccCC
Q 004994 437 QYTNSFSEGNFIGEGLLGSVYKAELP----GGKLLAVKKLSNTVSQRQTDEEFLELASTISRL-RHGNIVELIGYCNEHG 511 (720)
Q Consensus 437 ~~~~~~~~~~~lg~G~~g~Vy~~~~~----~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~ 511 (720)
...+.|+..+.||+|+||+||+|+.+ +++.||||++.+. .....+.+|+++++.+ +|||||++++++.+.+
T Consensus 18 ~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~----~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~ 93 (361)
T 4f9c_A 18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPT----SHPIRIAAELQCLTVAGGQDNVMGVKYCFRKND 93 (361)
T ss_dssp GGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTT----SCHHHHHHHHHHHHHTCSBTTBCCCSEEEEETT
T ss_pred CccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccc----cCHHHHHHHHHHHHHhcCCCCCceEEEEEEECC
Confidence 45678999999999999999999642 4789999998653 3345688999999998 6999999999999999
Q ss_pred eEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCC-CCeEEcccc
Q 004994 512 QHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEK-LIVRVSDCG 590 (720)
Q Consensus 512 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~-~~~kl~DFG 590 (720)
+.|+||||+++|+|.+++. .+++.....++.|++.||+|||+. +||||||||+|||++.+ +.+||+|||
T Consensus 94 ~~~lvmE~~~g~~L~~~~~-------~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~kl~DFG 163 (361)
T 4f9c_A 94 HVVIAMPYLEHESFLDILN-------SLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYALVDFG 163 (361)
T ss_dssp EEEEEEECCCCCCHHHHHT-------TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCT
T ss_pred EEEEEEeCCCcccHHHHHc-------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEEECcCC
Confidence 9999999999999999883 378889999999999999999997 99999999999999877 799999999
Q ss_pred CCCCCCCCCCc--------------------------ccccCccccccCCCCccCCC--CCCCccchHhHHHHHHHHHhC
Q 004994 591 LAPLLFSGSTN--------------------------ELSEGLLTAHGSGAPEFESG--SYSCQSDVYSLGVVMLELLTG 642 (720)
Q Consensus 591 la~~~~~~~~~--------------------------~~~~~~~~~~~~~aPE~~~~--~~~~~~Dv~S~Gvvl~elltG 642 (720)
+|+........ .......||++|+|||.+.+ .|+.++||||+||++|||+||
T Consensus 164 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G 243 (361)
T 4f9c_A 164 LAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSG 243 (361)
T ss_dssp TCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHT
T ss_pred CCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHC
Confidence 99865432111 11123468999999998843 489999999999999999999
Q ss_pred CCCCCCCC
Q 004994 643 RKPYDRSR 650 (720)
Q Consensus 643 ~~Pf~~~~ 650 (720)
+.||....
T Consensus 244 ~~Pf~~~~ 251 (361)
T 4f9c_A 244 RYPFYKAS 251 (361)
T ss_dssp CSSSSCCS
T ss_pred CCCCCCCC
Confidence 99996543
No 19
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=7.5e-45 Score=385.23 Aligned_cols=289 Identities=35% Similarity=0.591 Sum_probs=238.5
Q ss_pred ccccCHHHHHHHhcCCCCCCeeccCCCceEEEEEeCCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeE
Q 004994 427 VSVFTIASLQQYTNSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGY 506 (720)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~ 506 (720)
...++.+++....++|...+.||+|+||+||+|...+|+.||||++...... .....+.+|++++++++||||++++++
T Consensus 17 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~ 95 (326)
T 3uim_A 17 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQ-GGELQFQTEVEMISMAVHRNLLRLRGF 95 (326)
T ss_dssp CEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC------CCCHHHHHHHGGGTCCCTTBCCCCEE
T ss_pred cceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCc-hHHHHHHHHHHHHHhccCCCccceEEE
Confidence 4568899999999999999999999999999998888999999999754322 222368999999999999999999999
Q ss_pred eccCCeEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEE
Q 004994 507 CNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRV 586 (720)
Q Consensus 507 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl 586 (720)
+.+.+..++||||+++|+|.+++.........++|..+..++.+++.||+|||+.+.++|+||||||+|||++.++.+||
T Consensus 96 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl 175 (326)
T 3uim_A 96 CMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVV 175 (326)
T ss_dssp ECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEE
T ss_pred EecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEe
Confidence 99999999999999999999999876555667999999999999999999999987779999999999999999999999
Q ss_pred ccccCCCCCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCC--Cccccchhhhccc
Q 004994 587 SDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSR--PRGEQSLVRWAIP 663 (720)
Q Consensus 587 ~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~--~~~~~~~~~~~~~ 663 (720)
+|||+++....... .......++..|+|||.. .+.++.++|||||||++|||+||+.||.... .........|...
T Consensus 176 ~Dfg~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 254 (326)
T 3uim_A 176 GDFGLAKLMDYKDT-HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKG 254 (326)
T ss_dssp CCCSSCEECCSSSS-CEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTT
T ss_pred ccCccccccCcccc-cccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHH
Confidence 99999987643322 223345589999999988 5678999999999999999999999996311 1112233334332
Q ss_pred ccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q 004994 664 RLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLC 718 (720)
Q Consensus 664 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 718 (720)
... ......+.+......+....+..+.+++.+||+.||++|||++||+++|++
T Consensus 255 ~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~ 308 (326)
T 3uim_A 255 LLK-EKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 308 (326)
T ss_dssp TTS-SCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHT
T ss_pred Hhh-chhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcC
Confidence 222 233455566666666777888899999999999999999999999999985
No 20
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=7e-45 Score=408.20 Aligned_cols=250 Identities=25% Similarity=0.303 Sum_probs=198.4
Q ss_pred cCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEeccccc-ccccHHHH---HHHHHHHHccCCCceeEEEeEeccCCeEE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVS-QRQTDEEF---LELASTISRLRHGNIVELIGYCNEHGQHL 514 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~---~~e~~~l~~l~H~niv~l~~~~~~~~~~~ 514 (720)
++|...++||+|+||+||+|+. .+|+.||||++.+... ........ ..++++++.++|||||+++++|.+.+.+|
T Consensus 189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~ly 268 (689)
T 3v5w_A 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS 268 (689)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEE
Confidence 5788899999999999999965 5799999999975422 12222233 34466777889999999999999999999
Q ss_pred EEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCC
Q 004994 515 LVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPL 594 (720)
Q Consensus 515 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~ 594 (720)
+||||++||+|.+++.. ...+++.....++.||+.||+|||+. +||||||||+||||+.+|++||+|||+|+.
T Consensus 269 lVmEy~~GGdL~~~l~~----~~~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL~DFGlA~~ 341 (689)
T 3v5w_A 269 FILDLMNGGDLHYHLSQ----HGVFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACD 341 (689)
T ss_dssp EEECCCCSCBHHHHHHH----HCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EEEecCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEecccceeee
Confidence 99999999999999953 35689999999999999999999987 999999999999999999999999999987
Q ss_pred CCCCCCcccccCccccccCCCCccC-CC-CCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhh
Q 004994 595 LFSGSTNELSEGLLTAHGSGAPEFE-SG-SYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALS 672 (720)
Q Consensus 595 ~~~~~~~~~~~~~~~~~~~~aPE~~-~~-~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (720)
+.... .....||+.|+|||++ .+ .|+.++||||+||++|||++|+.||..........+.... ..
T Consensus 342 ~~~~~----~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i---------~~ 408 (689)
T 3v5w_A 342 FSKKK----PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMT---------LT 408 (689)
T ss_dssp CSSCC----CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHH---------HH
T ss_pred cCCCC----CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhh---------cC
Confidence 64432 2346799999999998 34 6999999999999999999999999653322211111100 00
Q ss_pred hhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCC-----HHHHHHH
Q 004994 673 RMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPP-----MSEIVQD 715 (720)
Q Consensus 673 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt-----~~evl~~ 715 (720)
.... ++...++++.+|+.+||++||++|++ ++||++|
T Consensus 409 --~~~~----~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~H 450 (689)
T 3v5w_A 409 --MAVE----LPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKES 450 (689)
T ss_dssp --CCCC----CCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTS
T ss_pred --CCCC----CCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcC
Confidence 0111 11223467889999999999999998 6888754
No 21
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=2.5e-44 Score=406.91 Aligned_cols=252 Identities=20% Similarity=0.279 Sum_probs=205.2
Q ss_pred hcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEE
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVY 517 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 517 (720)
.++|...+.||+|+||+||+|.. .+|+.||||++.... ....+.+.+|+++|+.++|||||+++++|.+.+..|+||
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~--~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~ 233 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH--ESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIY 233 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS--HHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccc--hhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEE
Confidence 35788899999999999999965 579999999996532 334567889999999999999999999999999999999
Q ss_pred eeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCC--CCeEEccccCCCCC
Q 004994 518 DYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEK--LIVRVSDCGLAPLL 595 (720)
Q Consensus 518 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~--~~~kl~DFGla~~~ 595 (720)
|||++|+|.+++... ...+++.....++.|+++||+|||+. +|+||||||+|||++.+ +.+||+|||+|+.+
T Consensus 234 E~~~gg~L~~~i~~~---~~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~ 307 (573)
T 3uto_A 234 EFMSGGELFEKVADE---HNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHL 307 (573)
T ss_dssp ECCCCCBHHHHHTCT---TSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCSSCEEC
T ss_pred eecCCCcHHHHHHHh---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeeccceeEc
Confidence 999999999998532 34688999999999999999999997 99999999999999854 89999999999987
Q ss_pred CCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhh
Q 004994 596 FSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRM 674 (720)
Q Consensus 596 ~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (720)
.... ......||+.|+|||.+ ...|+.++||||+||++|||++|+.||...........+..
T Consensus 308 ~~~~---~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~-------------- 370 (573)
T 3uto_A 308 DPKQ---SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKS-------------- 370 (573)
T ss_dssp CTTS---EEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHT--------------
T ss_pred cCCC---ceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHh--------------
Confidence 5432 22345789999999998 45699999999999999999999999976433221111110
Q ss_pred cCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 675 VDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 675 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.+...........++++.+|+.+||+.||++|||++|+++|
T Consensus 371 ~~~~~~~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~H 411 (573)
T 3uto_A 371 CDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEH 411 (573)
T ss_dssp TCCCCCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred CCCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 01111112222344678899999999999999999999985
No 22
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=2.2e-42 Score=362.99 Aligned_cols=284 Identities=30% Similarity=0.461 Sum_probs=229.9
Q ss_pred ccccCHHHHHHHhcCCCCC------CeeccCCCceEEEEEeCCCcEEEEEEecccc--cccccHHHHHHHHHHHHccCCC
Q 004994 427 VSVFTIASLQQYTNSFSEG------NFIGEGLLGSVYKAELPGGKLLAVKKLSNTV--SQRQTDEEFLELASTISRLRHG 498 (720)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~------~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~--~~~~~~~~~~~e~~~l~~l~H~ 498 (720)
...|+..++..++++|... +.||+|+||+||+|.. +++.||||++.... ......+.+.+|++++++++||
T Consensus 12 ~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ 90 (307)
T 2nru_A 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHE 90 (307)
T ss_dssp CEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCT
T ss_pred CCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCC
Confidence 3568999999999999887 8999999999999986 67899999987532 2234457899999999999999
Q ss_pred ceeEEEeEeccCCeEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEE
Q 004994 499 NIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILL 578 (720)
Q Consensus 499 niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl 578 (720)
||+++++++.+.+..++||||+++++|.+++.... ....+++..+..++.++++||.|||+. +|+||||||+||++
T Consensus 91 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nili 166 (307)
T 2nru_A 91 NLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLD-GTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILL 166 (307)
T ss_dssp TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGG-GCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEE
T ss_pred CeEEEEEEEecCCceEEEEEecCCCcHHHHHHhcc-CCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEE
Confidence 99999999999999999999999999999986532 245689999999999999999999997 99999999999999
Q ss_pred cCCCCeEEccccCCCCCCCCCCcccccCccccccCCCCccCCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCcccc-ch
Q 004994 579 DEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFESGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQ-SL 657 (720)
Q Consensus 579 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~-~~ 657 (720)
+.++.+||+|||+++...............++..|+|||...+.++.++||||||+++|||+||+.||......... .+
T Consensus 167 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~ 246 (307)
T 2nru_A 167 DEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDI 246 (307)
T ss_dssp CTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTTEECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHH
T ss_pred cCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcCCCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHH
Confidence 99999999999999876543333333445688999999998888999999999999999999999999764332211 11
Q ss_pred hhhcccccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 658 VRWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 658 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
.... ......+...+++.+.. .....+..+.+++.+||+.||.+|||++||+++|+++
T Consensus 247 ~~~~---~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l 304 (307)
T 2nru_A 247 KEEI---EDEEKTIEDYIDKKMND-ADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEM 304 (307)
T ss_dssp HHHH---HTTSCCHHHHSCSSCSC-CCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred HHHh---hhhhhhhhhhccccccc-cchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence 1100 01111233344444322 3445677899999999999999999999999999986
No 23
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=2.8e-43 Score=372.51 Aligned_cols=270 Identities=22% Similarity=0.299 Sum_probs=207.8
Q ss_pred cCCCCCCeeccCCCceEEEEEeCCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCC----eEEE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHG----QHLL 515 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~----~~~l 515 (720)
++|...+.||+|+||+||+|+.. ++.||||++... ......+..|+.++++++|||||++++++.+.. ..++
T Consensus 24 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~l 99 (322)
T 3soc_A 24 MPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQ---DKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWL 99 (322)
T ss_dssp EEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred hhchhhheecccCceEEEEEEEC-CCEEEEEEeecC---chHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEE
Confidence 57888899999999999999775 789999999643 233445667888999999999999999997643 4799
Q ss_pred EEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhc-------CCCCeeecCCCCCCeEEcCCCCeEEcc
Q 004994 516 VYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEV-------CEPPIVHGNFKSSNILLDEKLIVRVSD 588 (720)
Q Consensus 516 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~-------~~~~ivHrDlkp~NiLl~~~~~~kl~D 588 (720)
||||+++|+|.+++.. ..+++..+..++.++++||+|||+. |.++|+||||||+|||++.++.+||+|
T Consensus 100 v~e~~~~g~L~~~l~~-----~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~D 174 (322)
T 3soc_A 100 ITAFHEKGSLSDFLKA-----NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIAD 174 (322)
T ss_dssp EEECCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECC
T ss_pred EEecCCCCCHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEcc
Confidence 9999999999999953 3589999999999999999999975 345899999999999999999999999
Q ss_pred ccCCCCCCCCCCcccccCccccccCCCCccCCC------CCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcc
Q 004994 589 CGLAPLLFSGSTNELSEGLLTAHGSGAPEFESG------SYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAI 662 (720)
Q Consensus 589 FGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~------~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~ 662 (720)
||+++.+.............++..|+|||.+.+ .++.++|||||||++|||+||+.||................
T Consensus 175 Fg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~ 254 (322)
T 3soc_A 175 FGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIG 254 (322)
T ss_dssp CTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHC
T ss_pred CCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhc
Confidence 999987654433333344678999999998854 35678999999999999999999997644322221111111
Q ss_pred cccCchhhhhh-----hcCCCCCch-hhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 663 PRLHDIDALSR-----MVDPSLDGA-YLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 663 ~~~~~~~~~~~-----~~~~~~~~~-~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
.........+ ...+.+... .....+.++.+++.+||+.||++|||++||++.|++|
T Consensus 255 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l 316 (322)
T 3soc_A 255 -QHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQM 316 (322)
T ss_dssp -SSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred -cCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 0111111111 112222221 1234567799999999999999999999999999976
No 24
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=4.7e-43 Score=377.76 Aligned_cols=261 Identities=23% Similarity=0.382 Sum_probs=208.8
Q ss_pred hcCCCCCCeeccCCCceEEEEEe--------CCCcEEEEEEecccccccccHHHHHHHHHHHHcc-CCCceeEEEeEecc
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAEL--------PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRL-RHGNIVELIGYCNE 509 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~--------~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~ 509 (720)
.++|...+.||+|+||+||+|.. .++..||||+++... .....+.+.+|+++++++ +||||++++++|.+
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 158 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA-TEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 158 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTC-BHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCc-CHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEcc
Confidence 35677889999999999999964 245689999997543 234457899999999999 89999999999999
Q ss_pred CCeEEEEEeeCCCCCHHHHhhccch------------hccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeE
Q 004994 510 HGQHLLVYDYGGNCTLHDLLHSDEE------------AHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNIL 577 (720)
Q Consensus 510 ~~~~~lv~e~~~~gsL~~~l~~~~~------------~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiL 577 (720)
.+..++||||+++|+|.+++..... ....+++..+..++.|+++||+|||+. +||||||||+|||
T Consensus 159 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIl 235 (370)
T 2psq_A 159 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVL 235 (370)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEE
T ss_pred CCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchhhEE
Confidence 9999999999999999999964321 123578999999999999999999997 9999999999999
Q ss_pred EcCCCCeEEccccCCCCCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCcccc
Q 004994 578 LDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQ 655 (720)
Q Consensus 578 l~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~ 655 (720)
++.++.+||+|||+++.+.............++..|+|||.+ ...++.++|||||||++|||+| |+.||.........
T Consensus 236 l~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~~ 315 (370)
T 2psq_A 236 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF 315 (370)
T ss_dssp ECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHH
T ss_pred ECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHH
Confidence 999999999999999876543332233334567889999988 6679999999999999999999 99999754322111
Q ss_pred chhhhcccccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhC
Q 004994 656 SLVRWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCMI 720 (720)
Q Consensus 656 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~ 720 (720)
..+ ..-..+. .+..++.++.+++.+||+.||++|||+.|++++|++++
T Consensus 316 ~~~-------------~~~~~~~----~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il 363 (370)
T 2psq_A 316 KLL-------------KEGHRMD----KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 363 (370)
T ss_dssp HHH-------------HTTCCCC----CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHH-------------hcCCCCC----CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 100 0000011 11223467889999999999999999999999999864
No 25
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=4.4e-43 Score=368.56 Aligned_cols=260 Identities=31% Similarity=0.378 Sum_probs=202.2
Q ss_pred HhcCCCCCCeeccCCCceEEEEEeCCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEE
Q 004994 438 YTNSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVY 517 (720)
Q Consensus 438 ~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 517 (720)
..++|...+.||+|+||+||+|+. +|+.||||++..........+++.+|++++++++||||+++++++.+.+..++||
T Consensus 35 ~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 113 (309)
T 3p86_A 35 PWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVT 113 (309)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEE
T ss_pred ChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEE
Confidence 356788889999999999999976 6889999999765544555678999999999999999999999999999999999
Q ss_pred eeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCC--eeecCCCCCCeEEcCCCCeEEccccCCCCC
Q 004994 518 DYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPP--IVHGNFKSSNILLDEKLIVRVSDCGLAPLL 595 (720)
Q Consensus 518 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~--ivHrDlkp~NiLl~~~~~~kl~DFGla~~~ 595 (720)
||+++|+|.+++.... ....+++..+..++.++++||+|||+. + |+||||||+|||++.++.+||+|||+++..
T Consensus 114 e~~~~~~L~~~l~~~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~ 189 (309)
T 3p86_A 114 EYLSRGSLYRLLHKSG-AREQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLK 189 (309)
T ss_dssp ECCTTCBHHHHHHSTT-HHHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEEECCCC-----
T ss_pred ecCCCCcHHHHHhhcC-CCCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEEECCCCCCccc
Confidence 9999999999997532 234589999999999999999999987 6 999999999999999999999999999765
Q ss_pred CCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhh
Q 004994 596 FSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRM 674 (720)
Q Consensus 596 ~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (720)
.... .......++..|+|||.+ ...++.++|||||||++|||+||+.||...........+....
T Consensus 190 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~~~~------------ 255 (309)
T 3p86_A 190 ASTF--LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKC------------ 255 (309)
T ss_dssp --------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHHSC------------
T ss_pred cccc--cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcC------------
Confidence 3321 122345688999999998 4568999999999999999999999997543221111110000
Q ss_pred cCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhC
Q 004994 675 VDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCMI 720 (720)
Q Consensus 675 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~ 720 (720)
.... .+...+.++.+++.+||+.||++|||++|+++.|+.++
T Consensus 256 ~~~~----~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~ 297 (309)
T 3p86_A 256 KRLE----IPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLI 297 (309)
T ss_dssp CCCC----CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCC----CCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 0001 11223357889999999999999999999999998763
No 26
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=2.2e-42 Score=365.99 Aligned_cols=249 Identities=22% Similarity=0.329 Sum_probs=204.3
Q ss_pred hcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEE
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVY 517 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 517 (720)
.++|...+.||+|+||+||+|.. .+|+.||||++.+........+.+.+|+++++.++||||+++++++.+.+..++||
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 93 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM 93 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 46788899999999999999966 68999999999765544555677899999999999999999999999999999999
Q ss_pred eeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCC
Q 004994 518 DYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFS 597 (720)
Q Consensus 518 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~ 597 (720)
||+++|+|.+++.. ...+++.....++.|+++||+|||+. +|+||||||+|||++.++++||+|||+++....
T Consensus 94 e~~~~~~L~~~l~~----~~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 166 (328)
T 3fe3_A 94 EYASGGEVFDYLVA----HGRMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTV 166 (328)
T ss_dssp CCCTTCBHHHHHHH----HCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTCCGGGSS
T ss_pred ECCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeeccCceecCC
Confidence 99999999999853 35688999999999999999999997 999999999999999999999999999987643
Q ss_pred CCCcccccCccccccCCCCccC-CCCC-CCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhc
Q 004994 598 GSTNELSEGLLTAHGSGAPEFE-SGSY-SCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMV 675 (720)
Q Consensus 598 ~~~~~~~~~~~~~~~~~aPE~~-~~~~-~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (720)
.. ......++++|+|||.+ ...+ +.++|||||||++|||+||+.||...........+...
T Consensus 167 ~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~-------------- 229 (328)
T 3fe3_A 167 GG---KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRG-------------- 229 (328)
T ss_dssp SC---GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC--------------
T ss_pred CC---ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhC--------------
Confidence 32 23345689999999998 4444 57999999999999999999999764322111111000
Q ss_pred CCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 676 DPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 676 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.... +...+.++.+++.+||+.||.+|||++|++++
T Consensus 230 ~~~~----p~~~s~~~~~li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 230 KYRI----PFYMSTDCENLLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp CCCC----CTTSCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred CCCC----CCCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0001 11123567899999999999999999999875
No 27
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=7.1e-42 Score=357.36 Aligned_cols=250 Identities=22% Similarity=0.344 Sum_probs=204.3
Q ss_pred hcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEE
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVY 517 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 517 (720)
.++|...+.||+|+||+||+|.. .+|+.||||++.... ....+.+.+|+.++++++||||+++++++...+..++||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 96 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQ--QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM 96 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGG--CSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeeccc--ccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEE
Confidence 46899999999999999999964 679999999986432 344577899999999999999999999999999999999
Q ss_pred eeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCC
Q 004994 518 DYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFS 597 (720)
Q Consensus 518 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~ 597 (720)
||+++|+|.+++.. ..+++.....++.+++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 97 e~~~~~~L~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 168 (297)
T 3fxz_A 97 EYLAGGSLTDVVTE-----TCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP 168 (297)
T ss_dssp ECCTTCBHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCS
T ss_pred ECCCCCCHHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCceecCC
Confidence 99999999999853 3588899999999999999999997 999999999999999999999999999987643
Q ss_pred CCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcC
Q 004994 598 GSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVD 676 (720)
Q Consensus 598 ~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (720)
... ......++..|+|||.+ ...++.++|||||||++|||+||+.||............. ....
T Consensus 169 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~-------------~~~~ 233 (297)
T 3fxz_A 169 EQS--KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIA-------------TNGT 233 (297)
T ss_dssp TTC--CBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHH-------------HHCS
T ss_pred ccc--ccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH-------------hCCC
Confidence 322 23345689999999998 5678999999999999999999999997543221111000 0000
Q ss_pred CCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 677 PSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 677 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
+.. ..+...+..+.+++.+||+.||++|||++|++++
T Consensus 234 ~~~--~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 270 (297)
T 3fxz_A 234 PEL--QNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 270 (297)
T ss_dssp CCC--SCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred CCC--CCccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 011 1122334678899999999999999999999874
No 28
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=1.2e-42 Score=375.81 Aligned_cols=256 Identities=25% Similarity=0.402 Sum_probs=205.1
Q ss_pred cCCCCCCeeccCCCceEEEEEeC-CCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEe
Q 004994 440 NSFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYD 518 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 518 (720)
++|...+.||+|+||+||+|... +++.||||+++... .....+.|.+|++++++++|||||++++++.+.+..++|||
T Consensus 114 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 192 (377)
T 3cbl_A 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETL-PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVME 192 (377)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTS-CHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred HHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccC-CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEE
Confidence 46777899999999999999775 78999999997542 23344578899999999999999999999999999999999
Q ss_pred eCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCC
Q 004994 519 YGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSG 598 (720)
Q Consensus 519 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~ 598 (720)
|+++|+|.+++.. ....+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 193 ~~~~g~L~~~l~~---~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~ 266 (377)
T 3cbl_A 193 LVQGGDFLTFLRT---EGARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGMSREEADG 266 (377)
T ss_dssp CCTTCBHHHHHHH---HGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECTTS
T ss_pred cCCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCCCceecCCC
Confidence 9999999999963 234688999999999999999999997 8999999999999999999999999999865332
Q ss_pred CCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcccccCchhhhhhhcC
Q 004994 599 STNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVD 676 (720)
Q Consensus 599 ~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (720)
..........++..|+|||.+ .+.++.++|||||||++|||+| |+.||...........+.
T Consensus 267 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~~----------------- 329 (377)
T 3cbl_A 267 VYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVE----------------- 329 (377)
T ss_dssp EEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHHH-----------------
T ss_pred ceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-----------------
Confidence 211111223356789999988 5678999999999999999998 999997543211111110
Q ss_pred CCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 677 PSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 677 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
.......+..++.++.+++.+||+.||++|||++++++.|+++
T Consensus 330 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 372 (377)
T 3cbl_A 330 KGGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSI 372 (377)
T ss_dssp TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred cCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHH
Confidence 0000011122346788999999999999999999999999876
No 29
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.9e-41 Score=356.46 Aligned_cols=257 Identities=25% Similarity=0.401 Sum_probs=205.6
Q ss_pred cCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEe
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYD 518 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 518 (720)
++|...+.||+|+||+||+|.. .+++.||+|++... .....+.|.+|++++++++||||+++++++.+.+..++|||
T Consensus 10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 87 (310)
T 3s95_A 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRF--DEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITE 87 (310)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccC--CHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEE
Confidence 4677789999999999999965 56999999998542 34556789999999999999999999999999999999999
Q ss_pred eCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCC
Q 004994 519 YGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSG 598 (720)
Q Consensus 519 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~ 598 (720)
|+++|+|.+++... ...+++..+..++.++++||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 88 ~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 161 (310)
T 3s95_A 88 YIKGGTLRGIIKSM---DSQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDE 161 (310)
T ss_dssp CCTTCBHHHHHHHC---CTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTCEECC--
T ss_pred ecCCCcHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccceecccc
Confidence 99999999999642 35689999999999999999999997 8999999999999999999999999999876433
Q ss_pred CCcc------------cccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhccccc
Q 004994 599 STNE------------LSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRL 665 (720)
Q Consensus 599 ~~~~------------~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~ 665 (720)
.... ......++..|+|||.+ ...++.++|||||||++|||++|..||............
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~------- 234 (310)
T 3s95_A 162 KTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGL------- 234 (310)
T ss_dssp ------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSB-------
T ss_pred cccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhh-------
Confidence 2111 11135688999999998 557899999999999999999999998654332211000
Q ss_pred CchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 666 HDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 666 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
...........+ .++.++.+++.+||+.||++|||++|+++.|+++
T Consensus 235 ~~~~~~~~~~~~--------~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l 280 (310)
T 3s95_A 235 NVRGFLDRYCPP--------NCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETL 280 (310)
T ss_dssp CHHHHHHHTCCT--------TCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred hhhccccccCCC--------CCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 000111111111 1234678999999999999999999999999875
No 30
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=1.1e-42 Score=373.67 Aligned_cols=270 Identities=23% Similarity=0.365 Sum_probs=211.9
Q ss_pred CHHHHHHHhcCCCCCCeeccCCCceEEEEEe------CCCcEEEEEEecccccccccHHHHHHHHHHHHcc-CCCceeEE
Q 004994 431 TIASLQQYTNSFSEGNFIGEGLLGSVYKAEL------PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRL-RHGNIVEL 503 (720)
Q Consensus 431 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~------~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l 503 (720)
...+.....++|...+.||+|+||.||+|.+ .+++.||||++.... .....+.+.+|+++++++ +|||||++
T Consensus 13 ~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hpniv~~ 91 (359)
T 3vhe_A 13 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-THSEHRALMSELKILIHIGHHLNVVNL 91 (359)
T ss_dssp CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcC-CHHHHHHHHHHHHHHHhhcCCcceeee
Confidence 3444455667899999999999999999963 346899999997543 233456799999999999 89999999
Q ss_pred EeEeccCC-eEEEEEeeCCCCCHHHHhhccchh-----------------------------------------------
Q 004994 504 IGYCNEHG-QHLLVYDYGGNCTLHDLLHSDEEA----------------------------------------------- 535 (720)
Q Consensus 504 ~~~~~~~~-~~~lv~e~~~~gsL~~~l~~~~~~----------------------------------------------- 535 (720)
+++|.+.+ ..++||||+++|+|.+++......
T Consensus 92 ~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (359)
T 3vhe_A 92 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEK 171 (359)
T ss_dssp EEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC------------------------------------------
T ss_pred eeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccccccccc
Confidence 99998754 589999999999999999754321
Q ss_pred ---------------ccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCCC
Q 004994 536 ---------------HKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGST 600 (720)
Q Consensus 536 ---------------~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~~ 600 (720)
...+++..+..++.++++||+|||+. +|+||||||+|||++.++.+||+|||+++.+.....
T Consensus 172 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 248 (359)
T 3vhe_A 172 SLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 248 (359)
T ss_dssp ------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTT
T ss_pred ccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeeccccc
Confidence 12288999999999999999999997 999999999999999999999999999987654443
Q ss_pred cccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcccccCchhhhhhhcCCC
Q 004994 601 NELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPS 678 (720)
Q Consensus 601 ~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (720)
........++..|+|||.. ...++.++|||||||++|||+| |+.||......... .. .+..-....
T Consensus 249 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~--~~----------~~~~~~~~~ 316 (359)
T 3vhe_A 249 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF--CR----------RLKEGTRMR 316 (359)
T ss_dssp CEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHH--HH----------HHHHTCCCC
T ss_pred chhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHH--HH----------HHHcCCCCC
Confidence 3344456678899999988 6679999999999999999999 99999754322110 00 000000011
Q ss_pred CCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhC
Q 004994 679 LDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCMI 720 (720)
Q Consensus 679 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~ 720 (720)
. +...++++.+++.+||+.||++|||++|++++|++++
T Consensus 317 ~----~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~ 354 (359)
T 3vhe_A 317 A----PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 354 (359)
T ss_dssp C----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred C----CCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHH
Confidence 1 1122357889999999999999999999999999864
No 31
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=2.4e-41 Score=354.98 Aligned_cols=259 Identities=27% Similarity=0.392 Sum_probs=200.5
Q ss_pred cCCCCCCeeccCCCceEEEEEeCCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEee
Q 004994 440 NSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDY 519 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 519 (720)
++|...+.||+|+||+||+|... ..+|+|.++.........+.|.+|++++++++||||+++++++.. +..++||||
T Consensus 36 ~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~lv~e~ 112 (307)
T 3lb7_A 36 SEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQW 112 (307)
T ss_dssp TSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEEC
T ss_pred cceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc-CcEEEEEec
Confidence 57888899999999999999764 358999987544444556789999999999999999999998764 458899999
Q ss_pred CCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCC
Q 004994 520 GGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGS 599 (720)
Q Consensus 520 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~ 599 (720)
+++++|.+++... ...+++..+..++.++++||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 113 ~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~ 186 (307)
T 3lb7_A 113 CEGSSLYKHLHVQ---ETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWS 186 (307)
T ss_dssp CSSCBHHHHHHTS---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCSSSEEECTTSCEEECCCCSSCC-----
T ss_pred CCCCcHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCChhhEEEcCCCCEEEccCCCceeccccc
Confidence 9999999998633 45689999999999999999999997 99999999999999999999999999998664322
Q ss_pred CcccccCccccccCCCCccC----CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhc
Q 004994 600 TNELSEGLLTAHGSGAPEFE----SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMV 675 (720)
Q Consensus 600 ~~~~~~~~~~~~~~~aPE~~----~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (720)
.........++..|+|||.+ ...++.++|||||||++|||+||+.||......... .... .....
T Consensus 187 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~--~~~~---------~~~~~ 255 (307)
T 3lb7_A 187 GSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQI--IFMV---------GRGYA 255 (307)
T ss_dssp -------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHH--HHHH---------HHTCC
T ss_pred ccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHHH--HHHH---------hcCCC
Confidence 22333445689999999986 346889999999999999999999999754332211 0000 00011
Q ss_pred CCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 676 DPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 676 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
.+.+. .....++.++.+++.+||+.||++|||+.|++++|+.+
T Consensus 256 ~~~~~-~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l 298 (307)
T 3lb7_A 256 SPDLS-KLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELL 298 (307)
T ss_dssp CCCST-TSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHH
T ss_pred Ccchh-hhhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHH
Confidence 11111 01122346788999999999999999999999999875
No 32
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=4.6e-42 Score=370.27 Aligned_cols=257 Identities=24% Similarity=0.378 Sum_probs=195.3
Q ss_pred hcCCCCCCeeccCCCceEEEEEeC----CCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEE
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAELP----GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHL 514 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~~----~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~ 514 (720)
.++|...+.||+|+||+||+|... ++..||||+++... .....++|.+|++++++++||||+++++++.+.+..+
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 122 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY-TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVM 122 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCE
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCcc-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceE
Confidence 357889999999999999999764 57789999997543 2345578999999999999999999999999999999
Q ss_pred EEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCC
Q 004994 515 LVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPL 594 (720)
Q Consensus 515 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~ 594 (720)
+||||+++|+|.++++.. ...+++..+..++.++++||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 123 lv~e~~~~~sL~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 196 (373)
T 2qol_A 123 IVTEYMENGSLDSFLRKH---DAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLGRV 196 (373)
T ss_dssp EEEECCTTCBHHHHHHTT---TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC-----
T ss_pred EEEeCCCCCcHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcCccccc
Confidence 999999999999999642 34689999999999999999999997 999999999999999999999999999987
Q ss_pred CCCCCCcc-cccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcccccCchhhh
Q 004994 595 LFSGSTNE-LSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDAL 671 (720)
Q Consensus 595 ~~~~~~~~-~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (720)
........ ......++..|+|||.. .+.++.++|||||||++|||++ |+.||....... .....
T Consensus 197 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~---~~~~i---------- 263 (373)
T 2qol_A 197 LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD---VIKAV---------- 263 (373)
T ss_dssp -----------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHH---HHHHH----------
T ss_pred cccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH---HHHHH----------
Confidence 64332111 11222346789999998 5679999999999999999998 999996543211 11100
Q ss_pred hhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 672 SRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 672 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
........+..++.++.+++.+||+.||++||+++||++.|+++
T Consensus 264 ----~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~ 307 (373)
T 2qol_A 264 ----DEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307 (373)
T ss_dssp ----HTTEECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ----HcCCCCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHH
Confidence 00000001112346788999999999999999999999999876
No 33
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.5e-41 Score=357.38 Aligned_cols=248 Identities=21% Similarity=0.230 Sum_probs=197.0
Q ss_pred hcCCCCCCeeccCCCceEEEEEeC-CCcEEEEEEecccccccccHHHHHHHHHHHHcc-CCCceeEEEeEeccCCeEEEE
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQRQTDEEFLELASTISRL-RHGNIVELIGYCNEHGQHLLV 516 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv 516 (720)
.++|+..+.||+|+||+||+|... +|+.||||++............+..|+..+.++ +||||++++++|.+.+..++|
T Consensus 56 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv 135 (311)
T 3p1a_A 56 QQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQ 135 (311)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEE
Confidence 457888899999999999999764 799999999875544444445556666666555 999999999999999999999
Q ss_pred EeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCC
Q 004994 517 YDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLF 596 (720)
Q Consensus 517 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~ 596 (720)
|||+ +++|.+++.. ....++|..+..++.+++.||+|||+. +||||||||+|||++.++.+||+|||+++...
T Consensus 136 ~e~~-~~~L~~~~~~---~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~ 208 (311)
T 3p1a_A 136 TELC-GPSLQQHCEA---WGASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLLVELG 208 (311)
T ss_dssp EECC-CCBHHHHHHH---HCSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCTTCEECC
T ss_pred Eecc-CCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccceeeeecc
Confidence 9999 5688888753 235699999999999999999999997 89999999999999999999999999997764
Q ss_pred CCCCcccccCccccccCCCCccCCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcC
Q 004994 597 SGSTNELSEGLLTAHGSGAPEFESGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVD 676 (720)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (720)
... ......++.+|+|||.+.+.++.++|||||||++|||++|..|+.... ....+..
T Consensus 209 ~~~---~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~-------------------~~~~~~~ 266 (311)
T 3p1a_A 209 TAG---AGEVQEGDPRYMAPELLQGSYGTAADVFSLGLTILEVACNMELPHGGE-------------------GWQQLRQ 266 (311)
T ss_dssp ---------CCCCCGGGCCGGGGGTCCSTHHHHHHHHHHHHHHHHTCCCCSSHH-------------------HHHHHTT
T ss_pred cCC---CCcccCCCccccCHhHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcc-------------------HHHHHhc
Confidence 322 223355889999999998889999999999999999999977664311 0111111
Q ss_pred CCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 677 PSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 677 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
...........++++.+++.+||+.||++|||++|++++
T Consensus 267 ~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 305 (311)
T 3p1a_A 267 GYLPPEFTAGLSSELRSVLVMMLEPDPKLRATAEALLAL 305 (311)
T ss_dssp TCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred cCCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHHhC
Confidence 112222233345678999999999999999999999874
No 34
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=5.4e-42 Score=362.99 Aligned_cols=257 Identities=26% Similarity=0.374 Sum_probs=203.9
Q ss_pred cCCCCCCeeccCCCceEEEEEeC----CCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAELP----GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLL 515 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~~----~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~l 515 (720)
++|...+.||+|+||+||+|... .+..||||++.... .....+.|.+|++++++++||||+++++++.+.+..++
T Consensus 49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 127 (325)
T 3kul_A 49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGY-TERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMI 127 (325)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEE
T ss_pred hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCC-CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEE
Confidence 56778899999999999999763 35569999997543 23445789999999999999999999999999999999
Q ss_pred EEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCC
Q 004994 516 VYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLL 595 (720)
Q Consensus 516 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~ 595 (720)
||||+++|+|.+++... ...+++..+..++.+++.||.|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 128 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 201 (325)
T 3kul_A 128 VTEYMENGSLDTFLRTH---DGQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSRVL 201 (325)
T ss_dssp EEECCTTCBHHHHHHTT---TTCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCSSCEEC
T ss_pred EeeCCCCCcHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECCCCccccc
Confidence 99999999999999543 34689999999999999999999997 9999999999999999999999999999876
Q ss_pred CCCCCc-ccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcccccCchhhhh
Q 004994 596 FSGSTN-ELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALS 672 (720)
Q Consensus 596 ~~~~~~-~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (720)
...... .......++..|+|||.+ ...++.++|||||||++|||++ |+.||...........+ .
T Consensus 202 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~-------------~ 268 (325)
T 3kul_A 202 EDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSV-------------E 268 (325)
T ss_dssp C----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHH-------------H
T ss_pred ccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHH-------------H
Confidence 443221 122233456789999998 4678999999999999999999 99999654322111000 0
Q ss_pred hhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhC
Q 004994 673 RMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCMI 720 (720)
Q Consensus 673 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~ 720 (720)
..... ..+..++.++.+++.+||+.||++|||+.||++.|+.++
T Consensus 269 ~~~~~----~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~ 312 (325)
T 3kul_A 269 EGYRL----PAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALI 312 (325)
T ss_dssp TTCCC----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred cCCCC----CCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 00000 011223467889999999999999999999999999863
No 35
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=9e-42 Score=351.23 Aligned_cols=253 Identities=24% Similarity=0.402 Sum_probs=206.0
Q ss_pred cCCCCCCeeccCCCceEEEEEeCCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEee
Q 004994 440 NSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDY 519 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 519 (720)
++|...+.||+|+||+||+|...+++.||+|++.... ...+++.+|++++++++||||+++++++.+.+..++||||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 86 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA---MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEF 86 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTS---BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred hhceeeheecCCCccEEEEEEecCCCeEEEEEecccc---cCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEe
Confidence 4677789999999999999998888999999997542 3456799999999999999999999999999999999999
Q ss_pred CCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCC
Q 004994 520 GGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGS 599 (720)
Q Consensus 520 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~ 599 (720)
+++++|.+++... ...+++..+..++.++++||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 87 ~~~~~L~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 160 (269)
T 4hcu_A 87 MEHGCLSDYLRTQ---RGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ 160 (269)
T ss_dssp CTTCBHHHHHHTT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHH
T ss_pred CCCCcHHHHHHhc---CcccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEeccccccccccccc
Confidence 9999999999642 34688999999999999999999987 89999999999999999999999999998663321
Q ss_pred CcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcccccCchhhhhhhcCC
Q 004994 600 TNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDP 677 (720)
Q Consensus 600 ~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (720)
........++..|+|||.. ...++.++||||||+++|||++ |+.||...........+ ......
T Consensus 161 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~-------------~~~~~~ 226 (269)
T 4hcu_A 161 -YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI-------------STGFRL 226 (269)
T ss_dssp -HHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHH-------------HTTCCC
T ss_pred -cccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHH-------------hcCccC
Confidence 1122234456789999998 5679999999999999999999 99999754322111000 000001
Q ss_pred CCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 678 SLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 678 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
.. +...+.++.+++.+||+.||++|||++|++++|+++
T Consensus 227 ~~----~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l 264 (269)
T 4hcu_A 227 YK----PRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEI 264 (269)
T ss_dssp CC----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CC----CCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHH
Confidence 11 111235688999999999999999999999999986
No 36
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=1e-41 Score=369.29 Aligned_cols=261 Identities=23% Similarity=0.366 Sum_probs=209.0
Q ss_pred hcCCCCCCeeccCCCceEEEEEe--------CCCcEEEEEEecccccccccHHHHHHHHHHHHcc-CCCceeEEEeEecc
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAEL--------PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRL-RHGNIVELIGYCNE 509 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~--------~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~ 509 (720)
.++|...+.||+|+||+||+|.. ..+..||||++.... .....+.+.+|+++++++ +|||||++++++.+
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 146 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDA-TEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ 146 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeecccc-CHHHHHHHHHHHHHHHHhcCCchhhhheeeecc
Confidence 35677889999999999999964 224689999997543 234457889999999999 99999999999999
Q ss_pred CCeEEEEEeeCCCCCHHHHhhccch------------hccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeE
Q 004994 510 HGQHLLVYDYGGNCTLHDLLHSDEE------------AHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNIL 577 (720)
Q Consensus 510 ~~~~~lv~e~~~~gsL~~~l~~~~~------------~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiL 577 (720)
.+..++||||+++|+|.+++..... ....+++..+..++.++++||+|||+. +|+||||||+|||
T Consensus 147 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIl 223 (382)
T 3tt0_A 147 DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVL 223 (382)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEE
T ss_pred CCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCcceEE
Confidence 9999999999999999999964321 124589999999999999999999997 9999999999999
Q ss_pred EcCCCCeEEccccCCCCCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCcccc
Q 004994 578 LDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQ 655 (720)
Q Consensus 578 l~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~ 655 (720)
++.++.+||+|||+++...............++..|+|||.+ ...++.++|||||||++|||+| |+.||........
T Consensus 224 l~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~~- 302 (382)
T 3tt0_A 224 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL- 302 (382)
T ss_dssp ECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHH-
T ss_pred EcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHH-
Confidence 999999999999999877544333333445567889999988 6678999999999999999999 9999975432111
Q ss_pred chhhhcccccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhC
Q 004994 656 SLVRWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCMI 720 (720)
Q Consensus 656 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~ 720 (720)
.... ....... .+..++.++.+++.+||+.||++|||++||+++|++++
T Consensus 303 --~~~~----------~~~~~~~----~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~ 351 (382)
T 3tt0_A 303 --FKLL----------KEGHRMD----KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 351 (382)
T ss_dssp --HHHH----------HTTCCCC----CCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred --HHHH----------HcCCCCC----CCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 1100 0000011 11123467889999999999999999999999999863
No 37
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=1.6e-41 Score=357.12 Aligned_cols=269 Identities=18% Similarity=0.269 Sum_probs=202.4
Q ss_pred HhcCCCCCCeeccCCCceEEEEEeCCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEE
Q 004994 438 YTNSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVY 517 (720)
Q Consensus 438 ~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 517 (720)
+.++|...+.||+|+||+||+|...+|+.||+|++..........+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 19 l~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 98 (311)
T 3niz_A 19 LMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVF 98 (311)
T ss_dssp SSCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEE
T ss_pred hHhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEE
Confidence 45678889999999999999998888999999999765444455678899999999999999999999999999999999
Q ss_pred eeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCC
Q 004994 518 DYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFS 597 (720)
Q Consensus 518 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~ 597 (720)
||+++ +|.+++... ...+++..+..++.++++||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 99 e~~~~-~l~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~ 171 (311)
T 3niz_A 99 EFMEK-DLKKVLDEN---KTGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGI 171 (311)
T ss_dssp ECCSE-EHHHHHHTC---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEETTS
T ss_pred cCCCC-CHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCcCceecCC
Confidence 99985 788877532 34588999999999999999999997 999999999999999999999999999987643
Q ss_pred CCCcccccCccccccCCCCccCC--CCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhh-cc-cccCch---hh
Q 004994 598 GSTNELSEGLLTAHGSGAPEFES--GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRW-AI-PRLHDI---DA 670 (720)
Q Consensus 598 ~~~~~~~~~~~~~~~~~aPE~~~--~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~-~~-~~~~~~---~~ 670 (720)
... ......++..|+|||.+. ..++.++|||||||++|||++|+.||...........+.. .. +..... ..
T Consensus 172 ~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 249 (311)
T 3niz_A 172 PVR--SYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQE 249 (311)
T ss_dssp CCC-----CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTT
T ss_pred Ccc--cccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhc
Confidence 221 222346789999999873 4589999999999999999999999976543322111100 00 000000 00
Q ss_pred hhhhcC---CCCC----chhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 671 LSRMVD---PSLD----GAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 671 ~~~~~~---~~~~----~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
+..+.+ .... ........+++.+|+.+||+.||++|||++|++++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 301 (311)
T 3niz_A 250 LPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNH 301 (311)
T ss_dssp SHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred cchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 000000 0000 01111233578899999999999999999999974
No 38
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=9.1e-42 Score=363.38 Aligned_cols=251 Identities=19% Similarity=0.241 Sum_probs=195.3
Q ss_pred HhcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEE
Q 004994 438 YTNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLV 516 (720)
Q Consensus 438 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 516 (720)
..++|...+.||+|+||+||+|.. .+|+.||||++.+.... ...+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 8 l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~-~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv 86 (347)
T 3zgw_A 8 LLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLG-SDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMV 86 (347)
T ss_dssp TTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC----CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccc-hHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEE
Confidence 457888899999999999999965 67999999999754322 2335688999999999999999999999999999999
Q ss_pred EeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCC
Q 004994 517 YDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLF 596 (720)
Q Consensus 517 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~ 596 (720)
|||+++|+|.+++.. ...+++.....++.|++.||+|||+. +|+||||||+|||+++++.+||+|||++....
T Consensus 87 ~E~~~gg~L~~~l~~----~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~kL~DFG~a~~~~ 159 (347)
T 3zgw_A 87 LEYCPGGELFDYIIS----QDRLSEEETRVVFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPK 159 (347)
T ss_dssp EECCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC--
T ss_pred EeCCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCccHHHEEEcCCCCEEEEeccCccccc
Confidence 999999999999853 34689999999999999999999997 99999999999999999999999999997654
Q ss_pred CCCCcccccCccccccCCCCccCCC-C-CCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhh
Q 004994 597 SGSTNELSEGLLTAHGSGAPEFESG-S-YSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRM 674 (720)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~aPE~~~~-~-~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (720)
.... .......|++.|+|||.+.+ . ++.++|||||||++|||++|+.||...........+.. .
T Consensus 160 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~~i~~------------~- 225 (347)
T 3zgw_A 160 GNKD-YHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMR------------G- 225 (347)
T ss_dssp -------------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH------------T-
T ss_pred CCCC-ccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHc------------C-
Confidence 3221 12334568999999999844 4 48899999999999999999999975432111100000 0
Q ss_pred cCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 675 VDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 675 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.... +...+.++.+++.+||+.||++|||++|++++
T Consensus 226 -~~~~----p~~~s~~~~~li~~~L~~dP~~Rps~~eil~h 261 (347)
T 3zgw_A 226 -KYDV----PKWLSPSSILLLQQMLQVDPKKRISMKNLLNH 261 (347)
T ss_dssp -CCCC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred -CCCC----CCCCCHHHHHHHHHHcccCHhHCcCHHHHhcC
Confidence 0001 11123567899999999999999999999975
No 39
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=7.5e-42 Score=359.95 Aligned_cols=261 Identities=25% Similarity=0.394 Sum_probs=208.6
Q ss_pred hcCCCCCCeeccCCCceEEEEEe------CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCe
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAEL------PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQ 512 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~------~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~ 512 (720)
.++|...+.||+|+||.||+|.. .+++.||||++.... .....+.+.+|++++++++||||+++++++.+.+.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 100 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA-SPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGP 100 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCC-CHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCc
Confidence 45677889999999999999964 345899999997543 23445788999999999999999999999999999
Q ss_pred EEEEEeeCCCCCHHHHhhccch--------------------hccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCC
Q 004994 513 HLLVYDYGGNCTLHDLLHSDEE--------------------AHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFK 572 (720)
Q Consensus 513 ~~lv~e~~~~gsL~~~l~~~~~--------------------~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlk 572 (720)
.++||||+++|+|.+++..... ....+++..+..++.++++||+|||+. +|+|||||
T Consensus 101 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dik 177 (314)
T 2ivs_A 101 LLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLA 177 (314)
T ss_dssp CEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEECCCCS
T ss_pred eEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCcccccc
Confidence 9999999999999999965322 123488999999999999999999997 99999999
Q ss_pred CCCeEEcCCCCeEEccccCCCCCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCC
Q 004994 573 SSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSR 650 (720)
Q Consensus 573 p~NiLl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~ 650 (720)
|+|||++.++.+||+|||+++...............++..|+|||.. ...++.++|||||||++|||+| |+.||....
T Consensus 178 p~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 257 (314)
T 2ivs_A 178 ARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIP 257 (314)
T ss_dssp GGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred hheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCC
Confidence 99999999999999999999876543332233334567789999988 5568999999999999999999 999997543
Q ss_pred CccccchhhhcccccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhC
Q 004994 651 PRGEQSLVRWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCMI 720 (720)
Q Consensus 651 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~ 720 (720)
.......+. ....+. .+...++++.+++.+||+.||++|||++|++++|++++
T Consensus 258 ~~~~~~~~~-------------~~~~~~----~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~ 310 (314)
T 2ivs_A 258 PERLFNLLK-------------TGHRME----RPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMM 310 (314)
T ss_dssp GGGHHHHHH-------------TTCCCC----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHHhh-------------cCCcCC----CCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 221111110 000011 11223467889999999999999999999999999874
No 40
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=3.5e-41 Score=357.81 Aligned_cols=249 Identities=20% Similarity=0.281 Sum_probs=202.5
Q ss_pred cCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEeccccc-ccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVS-QRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVY 517 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 517 (720)
++|...+.||+|+||+||+|+. .+|+.||||++++... .....+.+.+|+++++.++||||+++++++.+.+..++||
T Consensus 5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 84 (337)
T 1o6l_A 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM 84 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEE
Confidence 5678889999999999999966 4699999999975421 2345577899999999999999999999999999999999
Q ss_pred eeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCC
Q 004994 518 DYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFS 597 (720)
Q Consensus 518 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~ 597 (720)
||+++|+|.+++.. ...+++.....++.+++.||+|||+. +|+||||||+|||++.++++||+|||+++....
T Consensus 85 E~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 157 (337)
T 1o6l_A 85 EYANGGELFFHLSR----ERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGIS 157 (337)
T ss_dssp ECCTTCBHHHHHHH----HSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC
T ss_pred eCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeeccchhhccc
Confidence 99999999998853 35688999999999999999999997 999999999999999999999999999986432
Q ss_pred CCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcC
Q 004994 598 GSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVD 676 (720)
Q Consensus 598 ~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (720)
.. .......||+.|+|||.+ ...++.++|||||||++|||++|+.||...........+. .. .
T Consensus 158 ~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~------------~~--~ 221 (337)
T 1o6l_A 158 DG--ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL------------ME--E 221 (337)
T ss_dssp TT--CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH------------HC--C
T ss_pred CC--CcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHHH------------cC--C
Confidence 21 223346789999999998 5578999999999999999999999997533211110000 00 0
Q ss_pred CCCCchhhHHHHHHHHHHHHHHhccCCCCCC-----CHHHHHHH
Q 004994 677 PSLDGAYLAKSLSRFADIISRCVQWEPGFRP-----PMSEIVQD 715 (720)
Q Consensus 677 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~evl~~ 715 (720)
.. ++...+.++.+++.+||+.||++|| +++|+++|
T Consensus 222 ~~----~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h 261 (337)
T 1o6l_A 222 IR----FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp CC----CCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred CC----CCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence 01 1112345788999999999999999 89999865
No 41
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=2.1e-41 Score=362.82 Aligned_cols=252 Identities=21% Similarity=0.279 Sum_probs=205.2
Q ss_pred HhcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEeccccccc----ccHHHHHHHHHHHHccCCCceeEEEeEeccCCe
Q 004994 438 YTNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQR----QTDEEFLELASTISRLRHGNIVELIGYCNEHGQ 512 (720)
Q Consensus 438 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~ 512 (720)
+.+.|...+.||+|+||+||+|.. .+|+.||+|.+.+..... ...+.+.+|++++++++||||+++++++.+.+.
T Consensus 10 ~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 89 (361)
T 2yab_A 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTD 89 (361)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred hhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCE
Confidence 456788899999999999999965 469999999997543221 245789999999999999999999999999999
Q ss_pred EEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCC----CeEEcc
Q 004994 513 HLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKL----IVRVSD 588 (720)
Q Consensus 513 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~----~~kl~D 588 (720)
.++||||+++|+|.+++.. ...+++.....++.+++.||.|||+. +|+||||||+|||++.++ .+||+|
T Consensus 90 ~~lv~e~~~gg~L~~~l~~----~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~~vkl~D 162 (361)
T 2yab_A 90 VVLILELVSGGELFDFLAQ----KESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLID 162 (361)
T ss_dssp EEEEEECCCSCBHHHHHTT----CSCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECC
T ss_pred EEEEEEcCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCccCEEEEe
Confidence 9999999999999999853 34689999999999999999999997 999999999999998877 799999
Q ss_pred ccCCCCCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCc
Q 004994 589 CGLAPLLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHD 667 (720)
Q Consensus 589 FGla~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~ 667 (720)
||+++.+.... ......|+++|+|||.+ ...++.++|||||||++|||++|+.||.........
T Consensus 163 FG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~------------ 227 (361)
T 2yab_A 163 FGLAHEIEDGV---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL------------ 227 (361)
T ss_dssp CSSCEECCTTC---CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHH------------
T ss_pred cCCceEcCCCC---ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHH------------
Confidence 99998764432 22345689999999998 457999999999999999999999999754321111
Q ss_pred hhhhhhhcC--CCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 668 IDALSRMVD--PSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 668 ~~~~~~~~~--~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
..+.. ...........+.++.+++.+||+.||++|||++|+++|
T Consensus 228 ----~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h 273 (361)
T 2yab_A 228 ----ANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRH 273 (361)
T ss_dssp ----HHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred ----HHHHhcCCCCCchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 11111 111112222344678899999999999999999999864
No 42
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=2e-41 Score=348.33 Aligned_cols=254 Identities=23% Similarity=0.337 Sum_probs=206.6
Q ss_pred hcCCCCCCeeccCCCceEEEEEeCCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEe
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYD 518 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 518 (720)
.++|...+.||+|+||+||+|+..++..||||++.... ...+++.+|++++++++||||+++++++.+.+..++|||
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 83 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGS---MSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTE 83 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTT---BCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCC---CcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEE
Confidence 35678889999999999999998888899999997542 345679999999999999999999999999999999999
Q ss_pred eCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCC
Q 004994 519 YGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSG 598 (720)
Q Consensus 519 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~ 598 (720)
|+++++|.+++.. ....+++..+..++.++++||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 84 ~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~ 157 (268)
T 3sxs_A 84 YISNGCLLNYLRS---HGKGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDD 157 (268)
T ss_dssp CCTTCBHHHHHHH---HGGGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCEEECCTT
T ss_pred ccCCCcHHHHHHH---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCccceecchh
Confidence 9999999999853 234689999999999999999999997 9999999999999999999999999999876443
Q ss_pred CCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcccccCchhhhhhhcC
Q 004994 599 STNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVD 676 (720)
Q Consensus 599 ~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (720)
.. .......++..|+|||.. ...++.++||||||+++|||+| |+.||...........+. ....
T Consensus 158 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~-------------~~~~ 223 (268)
T 3sxs_A 158 QY-VSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVS-------------QGHR 223 (268)
T ss_dssp CE-EECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHH-------------TTCC
T ss_pred hh-hcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHHH-------------cCCC
Confidence 22 122334456779999998 4578999999999999999999 999997543221110000 0000
Q ss_pred CCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 677 PSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 677 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
... +...++++.+++.+||+.||++|||++|++++|+++
T Consensus 224 ~~~----~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l 262 (268)
T 3sxs_A 224 LYR----PHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPL 262 (268)
T ss_dssp CCC----CTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGG
T ss_pred CCC----CCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHh
Confidence 000 111235688999999999999999999999999986
No 43
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=4e-42 Score=370.17 Aligned_cols=260 Identities=21% Similarity=0.318 Sum_probs=205.5
Q ss_pred hcCCCCCCeeccCCCceEEEEEeC------CCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCe
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAELP------GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQ 512 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~ 512 (720)
.++|...+.||+|+||+||+|.+. +++.||||++.... .......+.+|+.++++++|||||++++++.+.+.
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~ 148 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC-SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP 148 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSC-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEeccccc-ChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCC
Confidence 356788899999999999999742 46789999997542 23445678999999999999999999999999999
Q ss_pred EEEEEeeCCCCCHHHHhhccc---hhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCC---CeEE
Q 004994 513 HLLVYDYGGNCTLHDLLHSDE---EAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKL---IVRV 586 (720)
Q Consensus 513 ~~lv~e~~~~gsL~~~l~~~~---~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~---~~kl 586 (720)
.++||||+++|+|.+++.... .....+++..+..++.++++||+|||+. +|+||||||+|||++.++ .+||
T Consensus 149 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kL 225 (367)
T 3l9p_A 149 RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKI 225 (367)
T ss_dssp CEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEE
T ss_pred CEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCCceEEE
Confidence 999999999999999996432 1224589999999999999999999997 999999999999999554 5999
Q ss_pred ccccCCCCCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcccc
Q 004994 587 SDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPR 664 (720)
Q Consensus 587 ~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~ 664 (720)
+|||+|+.+.............++..|+|||.+ .+.++.++|||||||++|||+| |+.||........ ...
T Consensus 226 ~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~---~~~---- 298 (367)
T 3l9p_A 226 GDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEV---LEF---- 298 (367)
T ss_dssp CCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHH---HHH----
T ss_pred CCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH---HHH----
Confidence 999999765332222233345568899999988 6679999999999999999998 9999975432111 110
Q ss_pred cCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 665 LHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 665 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
+... .....+..++..+.+++.+||+.||++|||++||+++|+.+
T Consensus 299 ---------i~~~-~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~ 343 (367)
T 3l9p_A 299 ---------VTSG-GRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC 343 (367)
T ss_dssp ---------HHTT-CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ---------HHcC-CCCCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence 0000 00001112345688999999999999999999999999865
No 44
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=5.6e-41 Score=354.57 Aligned_cols=260 Identities=23% Similarity=0.307 Sum_probs=208.7
Q ss_pred ccCHHHHHHHhcC----------CCCCCeeccCCCceEEEEEeC-CCcEEEEEEecccccccccHHHHHHHHHHHHccCC
Q 004994 429 VFTIASLQQYTNS----------FSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRH 497 (720)
Q Consensus 429 ~~~~~~~~~~~~~----------~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H 497 (720)
.++.+++..+++. |...+.||+|+||.||+|... +|+.||||++.... ....+.+.+|++++++++|
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h 101 (321)
T 2c30_A 24 VVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRK--QQRRELLFNEVVIMRDYQH 101 (321)
T ss_dssp -CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT--CCSHHHHHHHHHHHTTCCC
T ss_pred cCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccc--hhHHHHHHHHHHHHHhCCC
Confidence 3567777766654 555678999999999999765 79999999997542 3456778999999999999
Q ss_pred CceeEEEeEeccCCeEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeE
Q 004994 498 GNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNIL 577 (720)
Q Consensus 498 ~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiL 577 (720)
|||+++++++...+..++||||+++++|.+++.. ..+++..+..++.++++||.|||+. +|+||||||+|||
T Consensus 102 ~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-----~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIl 173 (321)
T 2c30_A 102 FNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ-----VRLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSDSIL 173 (321)
T ss_dssp TTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTT-----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEE
T ss_pred CCcceEEEEEEECCEEEEEEecCCCCCHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEE
Confidence 9999999999999999999999999999998853 3589999999999999999999997 9999999999999
Q ss_pred EcCCCCeEEccccCCCCCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccc
Q 004994 578 LDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQS 656 (720)
Q Consensus 578 l~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~ 656 (720)
++.++.+||+|||+++....... ......++..|+|||.. .+.++.++|||||||++|||++|+.||.........
T Consensus 174 l~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~- 250 (321)
T 2c30_A 174 LTLDGRVKLSDFGFCAQISKDVP--KRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAM- 250 (321)
T ss_dssp ECTTCCEEECCCTTCEECCSSSC--CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH-
T ss_pred ECCCCcEEEeeeeeeeecccCcc--ccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH-
Confidence 99999999999999987643221 22345689999999998 556899999999999999999999999754321111
Q ss_pred hhhhcccccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 657 LVRWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 657 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
. .+.....+... .....+.++.+++.+||+.||++|||++|++++
T Consensus 251 --~----------~~~~~~~~~~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 295 (321)
T 2c30_A 251 --K----------RLRDSPPPKLK--NSHKVSPVLRDFLERMLVRDPQERATAQELLDH 295 (321)
T ss_dssp --H----------HHHHSSCCCCT--TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred --H----------HHhcCCCCCcC--ccccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0 11111111111 112234578899999999999999999999875
No 45
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=9.8e-42 Score=363.85 Aligned_cols=263 Identities=24% Similarity=0.360 Sum_probs=208.8
Q ss_pred HHhcCCCCCCeeccCCCceEEEEEeC------CCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccC
Q 004994 437 QYTNSFSEGNFIGEGLLGSVYKAELP------GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEH 510 (720)
Q Consensus 437 ~~~~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~ 510 (720)
...++|...+.||+|+||.||+|... +++.||||+++... .....+.|.+|++++++++||||+++++++.+.
T Consensus 44 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~ 122 (343)
T 1luf_A 44 YPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA-SADMQADFQREAALMAEFDNPNIVKLLGVCAVG 122 (343)
T ss_dssp CCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC-CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSS
T ss_pred ecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEecccc-CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccC
Confidence 34578889999999999999999763 35899999997543 234457899999999999999999999999999
Q ss_pred CeEEEEEeeCCCCCHHHHhhccch--------------------hccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecC
Q 004994 511 GQHLLVYDYGGNCTLHDLLHSDEE--------------------AHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGN 570 (720)
Q Consensus 511 ~~~~lv~e~~~~gsL~~~l~~~~~--------------------~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrD 570 (720)
+..++||||+++|+|.+++..... ....+++..+..++.++++||.|||+. +|+|||
T Consensus 123 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~ivH~D 199 (343)
T 1luf_A 123 KPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRD 199 (343)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSC
T ss_pred CceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCC
Confidence 999999999999999999965321 125689999999999999999999997 999999
Q ss_pred CCCCCeEEcCCCCeEEccccCCCCCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCC
Q 004994 571 FKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDR 648 (720)
Q Consensus 571 lkp~NiLl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~ 648 (720)
|||+|||++.++.+||+|||+++...............++..|+|||.. .+.++.++|||||||++|||+| |+.||..
T Consensus 200 lkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~ 279 (343)
T 1luf_A 200 LATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYG 279 (343)
T ss_dssp CSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred CCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCC
Confidence 9999999999999999999999765433222223345567889999987 5679999999999999999999 9999965
Q ss_pred CCCccccchhhhcccccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhC
Q 004994 649 SRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCMI 720 (720)
Q Consensus 649 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~ 720 (720)
...... .. .+.+.... ..+...+.++.+++.+||+.||++|||+.|++++|++++
T Consensus 280 ~~~~~~---~~-------------~~~~~~~~-~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~ 334 (343)
T 1luf_A 280 MAHEEV---IY-------------YVRDGNIL-ACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMC 334 (343)
T ss_dssp SCHHHH---HH-------------HHHTTCCC-CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred CChHHH---HH-------------HHhCCCcC-CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHH
Confidence 332111 10 01110000 011223457889999999999999999999999999874
No 46
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=9.9e-42 Score=360.59 Aligned_cols=255 Identities=22% Similarity=0.272 Sum_probs=201.7
Q ss_pred HhcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEE
Q 004994 438 YTNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLV 516 (720)
Q Consensus 438 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 516 (720)
+.++|...+.||+|+||+||+|.. .+++.||||++..... ....+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 5 ~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv 83 (323)
T 3tki_A 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLF 83 (323)
T ss_dssp TTTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC--------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred HhhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccc-cchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 346788899999999999999965 4799999999864322 22346788999999999999999999999999999999
Q ss_pred EeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCC
Q 004994 517 YDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLF 596 (720)
Q Consensus 517 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~ 596 (720)
|||+++|+|.+++.. ...+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++.+.
T Consensus 84 ~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 156 (323)
T 3tki_A 84 LEYCSGGELFDRIEP----DIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFR 156 (323)
T ss_dssp EECCTTEEGGGGSBT----TTBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECE
T ss_pred EEcCCCCcHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeeccceec
Confidence 999999999998853 34589999999999999999999987 99999999999999999999999999998764
Q ss_pred CCCCcccccCccccccCCCCccC-CCC-CCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhh
Q 004994 597 SGSTNELSEGLLTAHGSGAPEFE-SGS-YSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRM 674 (720)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~aPE~~-~~~-~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (720)
............++..|+|||.+ ... ++.++|||||||++|||+||+.||........ ....+..
T Consensus 157 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-~~~~~~~------------ 223 (323)
T 3tki_A 157 YNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ-EYSDWKE------------ 223 (323)
T ss_dssp ETTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSH-HHHHHHT------------
T ss_pred cCCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHH-HHHHHhc------------
Confidence 43333334456789999999998 334 47799999999999999999999975432211 1111110
Q ss_pred cCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 675 VDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 675 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
...........+.++.+++.+||+.||++|||++|++++
T Consensus 224 --~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 224 --KKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp --TCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred --ccccCCccccCCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 000000112234567899999999999999999999865
No 47
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=2.3e-41 Score=372.00 Aligned_cols=256 Identities=20% Similarity=0.262 Sum_probs=204.9
Q ss_pred HHhcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEE
Q 004994 437 QYTNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLL 515 (720)
Q Consensus 437 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~l 515 (720)
.+.++|...+.||+|+||+||+|.. .+|+.||+|++..........+.+.+|++++++++|||||++++++.+.+..++
T Consensus 8 ~~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 87 (444)
T 3soa_A 8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYL 87 (444)
T ss_dssp HHHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEE
T ss_pred cccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEE
Confidence 3567888999999999999999954 679999999997655444556788999999999999999999999999999999
Q ss_pred EEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEc---CCCCeEEccccCC
Q 004994 516 VYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLD---EKLIVRVSDCGLA 592 (720)
Q Consensus 516 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~---~~~~~kl~DFGla 592 (720)
||||+.+|+|.+.+.. ...+++.....++.++++||.|||+. +|+||||||+|||++ +++.+||+|||+|
T Consensus 88 v~E~~~gg~L~~~i~~----~~~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vkL~DFG~a 160 (444)
T 3soa_A 88 IFDLVTGGELFEDIVA----REYYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADFGLA 160 (444)
T ss_dssp EECCCBCCBHHHHHHH----CSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEEECCCSSC
T ss_pred EEEeCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEEEccCcee
Confidence 9999999999998853 35689999999999999999999997 999999999999998 4678999999999
Q ss_pred CCCCCCCCcccccCccccccCCCCccCC-CCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhh
Q 004994 593 PLLFSGSTNELSEGLLTAHGSGAPEFES-GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDAL 671 (720)
Q Consensus 593 ~~~~~~~~~~~~~~~~~~~~~~aPE~~~-~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (720)
+...... .......|+++|+|||.+. ..|+.++|||||||++|||++|+.||...........+....
T Consensus 161 ~~~~~~~--~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~--------- 229 (444)
T 3soa_A 161 IEVEGEQ--QAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGA--------- 229 (444)
T ss_dssp BCCCTTC--CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTC---------
T ss_pred EEecCCC--ceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhCC---------
Confidence 8764332 2223467899999999984 479999999999999999999999996543211111111000
Q ss_pred hhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 672 SRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 672 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
. ..........++++.+++.+||+.||++|||++|++++
T Consensus 230 ---~--~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~h 268 (444)
T 3soa_A 230 ---Y--DFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKH 268 (444)
T ss_dssp ---C--CCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred ---C--CCCccccccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 0 00001111234678899999999999999999999975
No 48
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.2e-41 Score=363.25 Aligned_cols=253 Identities=20% Similarity=0.313 Sum_probs=198.8
Q ss_pred hcCCCCCCeeccCCCceEEEEEeCCCcEEEEEEecccccccccHHHHHHHHHHHHccCC--CceeEEEeEeccCCeEEEE
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRH--GNIVELIGYCNEHGQHLLV 516 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H--~niv~l~~~~~~~~~~~lv 516 (720)
.+.|...+.||+|+||+||+|...+++.||||++..........+.+.+|++++++++| +||+++++++.+.+..++|
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 87 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 87 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEE
Confidence 35688889999999999999988889999999997654445556789999999999987 9999999999999999999
Q ss_pred EeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCC
Q 004994 517 YDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLF 596 (720)
Q Consensus 517 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~ 596 (720)
|| +.+++|.+++.. ...+++..+..++.++++||+|||+. +|+||||||+|||++ ++.+||+|||+++.+.
T Consensus 88 ~e-~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~ 158 (343)
T 3dbq_A 88 ME-CGNIDLNSWLKK----KKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQ 158 (343)
T ss_dssp EC-CCSEEHHHHHHH----SCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSCCC-
T ss_pred Ee-CCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEeecccccccC
Confidence 99 567899999853 35688999999999999999999997 999999999999997 5789999999998775
Q ss_pred CCCCcccccCccccccCCCCccCC------------CCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccc
Q 004994 597 SGSTNELSEGLLTAHGSGAPEFES------------GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPR 664 (720)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~aPE~~~------------~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~ 664 (720)
............++++|+|||.+. +.++.++|||||||++|||++|+.||......
T Consensus 159 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~------------ 226 (343)
T 3dbq_A 159 PDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ------------ 226 (343)
T ss_dssp -----------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSH------------
T ss_pred cccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhH------------
Confidence 443333344567899999999872 56889999999999999999999999643211
Q ss_pred cCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 665 LHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 665 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
...+..++++......+...+.++.+++.+||+.||.+|||+.|++++
T Consensus 227 ---~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h 274 (343)
T 3dbq_A 227 ---ISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 274 (343)
T ss_dssp ---HHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ---HHHHHHHhcCCcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence 111222222222222222233568899999999999999999999876
No 49
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=9e-42 Score=361.07 Aligned_cols=263 Identities=22% Similarity=0.359 Sum_probs=192.1
Q ss_pred HhcCCCCCCeeccCCCceEEEEEeCC-Cc---EEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeE
Q 004994 438 YTNSFSEGNFIGEGLLGSVYKAELPG-GK---LLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQH 513 (720)
Q Consensus 438 ~~~~~~~~~~lg~G~~g~Vy~~~~~~-g~---~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~ 513 (720)
..++|...+.||+|+||+||+|.... +. .||||++..........+.+.+|++++++++||||+++++++...+..
T Consensus 21 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 100 (323)
T 3qup_A 21 PEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAK 100 (323)
T ss_dssp C---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC---
T ss_pred ChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccc
Confidence 35678889999999999999997643 32 799999986554455668899999999999999999999999876654
Q ss_pred ------EEEEeeCCCCCHHHHhhccch--hccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeE
Q 004994 514 ------LLVYDYGGNCTLHDLLHSDEE--AHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVR 585 (720)
Q Consensus 514 ------~lv~e~~~~gsL~~~l~~~~~--~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~k 585 (720)
++||||+++|+|.+++..... ....+++..+..++.++++||+|||+. +|+||||||+|||+++++.+|
T Consensus 101 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~~~k 177 (323)
T 3qup_A 101 GRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVC 177 (323)
T ss_dssp ----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEE
T ss_pred cCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCCCEE
Confidence 999999999999999864321 122589999999999999999999997 999999999999999999999
Q ss_pred EccccCCCCCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhccc
Q 004994 586 VSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIP 663 (720)
Q Consensus 586 l~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~ 663 (720)
|+|||+++...............++..|+|||.. ...++.++|||||||++|||+| |+.||...........+
T Consensus 178 l~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~----- 252 (323)
T 3qup_A 178 VADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYL----- 252 (323)
T ss_dssp ECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHH-----
T ss_pred EeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHHHHHH-----
Confidence 9999999876544333333344567789999988 5678999999999999999999 99999754322111100
Q ss_pred ccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhC
Q 004994 664 RLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCMI 720 (720)
Q Consensus 664 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~ 720 (720)
.... ....+...+.++.+++.+||+.||++|||+.|+++.|++++
T Consensus 253 -----------~~~~-~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l 297 (323)
T 3qup_A 253 -----------IGGN-RLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENIL 297 (323)
T ss_dssp -----------HTTC-CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -----------hcCC-CCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 0000 00011123357889999999999999999999999999864
No 50
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=7.9e-42 Score=354.35 Aligned_cols=255 Identities=21% Similarity=0.380 Sum_probs=204.4
Q ss_pred hcCCCCCCeeccCCCceEEEEEeCCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEe
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYD 518 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 518 (720)
.++|...+.||+|+||+||+|...++..||||++.... ...+++.+|++++++++||||+++++++.+.+..++|||
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 99 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS---MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITE 99 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTS---BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEC
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCC---CCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEe
Confidence 45677889999999999999998888999999997542 345679999999999999999999999999999999999
Q ss_pred eCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCC
Q 004994 519 YGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSG 598 (720)
Q Consensus 519 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~ 598 (720)
|+++++|.+++... ...+++..+..++.++++||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 100 ~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~ 173 (283)
T 3gen_A 100 YMANGCLLNYLREM---RHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD 173 (283)
T ss_dssp CCTTCBHHHHHHCG---GGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCH
T ss_pred ccCCCcHHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEcccccccccccc
Confidence 99999999999642 34689999999999999999999997 9999999999999999999999999999866332
Q ss_pred CCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcccccCchhhhhhhcC
Q 004994 599 STNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVD 676 (720)
Q Consensus 599 ~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (720)
. ........++..|+|||.. ...++.++||||||+++|||+| |+.||...........+ .....
T Consensus 174 ~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~-------------~~~~~ 239 (283)
T 3gen_A 174 E-YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI-------------AQGLR 239 (283)
T ss_dssp H-HHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHH-------------HTTCC
T ss_pred c-cccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHHH-------------hcccC
Confidence 1 1122234456789999998 5679999999999999999998 99999754322111100 00001
Q ss_pred CCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhC
Q 004994 677 PSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCMI 720 (720)
Q Consensus 677 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~ 720 (720)
... +...++.+.+++.+||+.||++|||++|++++|++++
T Consensus 240 ~~~----~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~ 279 (283)
T 3gen_A 240 LYR----PHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVM 279 (283)
T ss_dssp CCC----CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCC----CCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHh
Confidence 111 1112356889999999999999999999999999863
No 51
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=7.8e-42 Score=362.22 Aligned_cols=255 Identities=24% Similarity=0.360 Sum_probs=196.2
Q ss_pred cCCCCCCeeccCCCceEEEEEe-CCCcE----EEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL-PGGKL----LAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHL 514 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~----vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~ 514 (720)
++|+..+.||+|+||+||+|.. .+++. ||+|.+.... .....++|.+|++++++++||||++++++|.+.. .+
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~ 92 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC--------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EE
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeeccccc-CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eE
Confidence 4678889999999999999975 34544 5888776432 2345678999999999999999999999998764 78
Q ss_pred EEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCC
Q 004994 515 LVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPL 594 (720)
Q Consensus 515 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~ 594 (720)
+|+||+.+|+|.+++... ...+++..+..++.++++||+|||+. +|+||||||+|||++.++.+||+|||+|+.
T Consensus 93 ~v~e~~~~g~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~ 166 (327)
T 3poz_A 93 LITQLMPFGCLLDYVREH---KDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKL 166 (327)
T ss_dssp EEEECCTTCBHHHHHHHS---TTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTHHHH
T ss_pred EEEEecCCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEccCcceeE
Confidence 999999999999998642 35689999999999999999999997 999999999999999999999999999987
Q ss_pred CCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcccccCchhhhh
Q 004994 595 LFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALS 672 (720)
Q Consensus 595 ~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (720)
+.............++..|+|||.+ .+.++.++|||||||++|||+| |+.||...........+..
T Consensus 167 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~------------ 234 (327)
T 3poz_A 167 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK------------ 234 (327)
T ss_dssp HTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHT------------
T ss_pred ccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHHHc------------
Confidence 6544333333344567789999988 6679999999999999999999 9999975432221111110
Q ss_pred hhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 673 RMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 673 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
......+..++.++.+++.+||+.||++|||+.|++++|+++
T Consensus 235 -----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~ 276 (327)
T 3poz_A 235 -----GERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 276 (327)
T ss_dssp -----TCCCCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHH
T ss_pred -----CCCCCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence 000001112335788999999999999999999999999875
No 52
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=2.5e-41 Score=352.75 Aligned_cols=261 Identities=22% Similarity=0.304 Sum_probs=203.6
Q ss_pred hcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEeccccc-ccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEE
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVS-QRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLV 516 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 516 (720)
.++|...+.||+|+||.||+|.. .+++.||+|++..... .....+.|.+|++++++++||||+++++++.+.+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 89 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV 89 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence 46788899999999999999965 5789999999864322 234457889999999999999999999999999999999
Q ss_pred EeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCC
Q 004994 517 YDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLF 596 (720)
Q Consensus 517 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~ 596 (720)
|||+++++|.+++.. ...+++..+..++.++++||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 90 ~e~~~g~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 162 (294)
T 4eqm_A 90 MEYIEGPTLSEYIES----HGPLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALS 162 (294)
T ss_dssp EECCCSCBHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCSSSTTC-
T ss_pred EeCCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCCCccccc
Confidence 999999999999853 34689999999999999999999997 99999999999999999999999999998764
Q ss_pred CCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhc
Q 004994 597 SGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMV 675 (720)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (720)
.... .......+++.|+|||.. ...++.++|||||||++|||+||+.||........ ...........
T Consensus 163 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~--~~~~~~~~~~~-------- 231 (294)
T 4eqm_A 163 ETSL-TQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSI--AIKHIQDSVPN-------- 231 (294)
T ss_dssp -------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHH--HHHHHSSCCCC--------
T ss_pred cccc-cccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHH--HHHHhhccCCC--------
Confidence 3221 122345689999999988 55789999999999999999999999975432110 00000000000
Q ss_pred CCCCCchhhHHHHHHHHHHHHHHhccCCCCCC-CHHHHHHHHHhhC
Q 004994 676 DPSLDGAYLAKSLSRFADIISRCVQWEPGFRP-PMSEIVQDLLCMI 720 (720)
Q Consensus 676 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-t~~evl~~L~~~~ 720 (720)
.........++.+.+++.+||+.||++|| +++++.+.|+.++
T Consensus 232 ---~~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~ 274 (294)
T 4eqm_A 232 ---VTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVL 274 (294)
T ss_dssp ---HHHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSS
T ss_pred ---cchhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHH
Confidence 00011122346788999999999999998 9999999998753
No 53
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=1.9e-41 Score=362.79 Aligned_cols=256 Identities=21% Similarity=0.296 Sum_probs=203.8
Q ss_pred HhcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEeccccc---ccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeE
Q 004994 438 YTNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVS---QRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQH 513 (720)
Q Consensus 438 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~ 513 (720)
+.+.|...+.||+|+||+||+|.. .+|+.||||++..... .....+.+.+|+++++.++||||+++++++.+.+..
T Consensus 22 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~ 101 (351)
T 3c0i_A 22 FEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGML 101 (351)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEE
T ss_pred cccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 345788889999999999999965 5799999999864321 122467899999999999999999999999999999
Q ss_pred EEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCC---eEEcccc
Q 004994 514 LLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLI---VRVSDCG 590 (720)
Q Consensus 514 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~---~kl~DFG 590 (720)
++||||+++++|.+.+.........+++.....++.|+++||+|||+. +|+||||||+|||++.++. +||+|||
T Consensus 102 ~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg 178 (351)
T 3c0i_A 102 YMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFG 178 (351)
T ss_dssp EEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCEEECCCT
T ss_pred EEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcEEEecCc
Confidence 999999999999988865433345689999999999999999999997 9999999999999987654 9999999
Q ss_pred CCCCCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchh
Q 004994 591 LAPLLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDID 669 (720)
Q Consensus 591 la~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 669 (720)
+++...... .......+++.|+|||.+ ...++.++|||||||++|||++|+.||..... ...
T Consensus 179 ~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~----~~~----------- 241 (351)
T 3c0i_A 179 VAIQLGESG--LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE----RLF----------- 241 (351)
T ss_dssp TCEECCTTS--CBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHH----HHH-----------
T ss_pred ceeEecCCC--eeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHH----HHH-----------
Confidence 998764322 223345689999999998 45689999999999999999999999965321 000
Q ss_pred hhhhhcCC--CCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 670 ALSRMVDP--SLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 670 ~~~~~~~~--~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
..+... ..........+.++.+++.+||+.||++|||+.|++++
T Consensus 242 --~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h 287 (351)
T 3c0i_A 242 --EGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNH 287 (351)
T ss_dssp --HHHHHTCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred --HHHHcCCCCCCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 000000 01111112234678899999999999999999999864
No 54
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=1.7e-41 Score=368.11 Aligned_cols=252 Identities=21% Similarity=0.316 Sum_probs=198.8
Q ss_pred cCCCCCCeeccCCCceEEEEEeCCCcEEEEEEecccccccccHHHHHHHHHHHHccC--CCceeEEEeEeccCCeEEEEE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLR--HGNIVELIGYCNEHGQHLLVY 517 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~--H~niv~l~~~~~~~~~~~lv~ 517 (720)
+.|...+.||+|+||+||+|...+++.||||++..........+.+.+|++++++++ ||||+++++++...+..++||
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 135 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 135 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence 458888999999999999998878999999999765444555678999999999996 599999999999999999999
Q ss_pred eeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCC
Q 004994 518 DYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFS 597 (720)
Q Consensus 518 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~ 597 (720)
| +.+++|.+++.. ...+++..+..++.++++||.|||+. +||||||||+|||++ ++.+||+|||+++.+..
T Consensus 136 E-~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~ 206 (390)
T 2zmd_A 136 E-CGNIDLNSWLKK----KKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQP 206 (390)
T ss_dssp E-CCSEEHHHHHHH----CSSCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCCSSSCCC--
T ss_pred e-cCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEecCccccccC
Confidence 9 577899999853 34678889999999999999999987 999999999999996 57999999999987754
Q ss_pred CCCcccccCccccccCCCCccCCC------------CCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhccccc
Q 004994 598 GSTNELSEGLLTAHGSGAPEFESG------------SYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRL 665 (720)
Q Consensus 598 ~~~~~~~~~~~~~~~~~aPE~~~~------------~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~ 665 (720)
...........++++|+|||++.+ .++.++|||||||++|||++|+.||......
T Consensus 207 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~------------- 273 (390)
T 2zmd_A 207 DTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ------------- 273 (390)
T ss_dssp -------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCH-------------
T ss_pred CCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHH-------------
Confidence 433333345678999999998732 6899999999999999999999999643211
Q ss_pred CchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 666 HDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 666 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
...+..++++......+...+.++.+++.+||+.||++|||+.|++++
T Consensus 274 --~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 274 --ISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp --HHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred --HHHHHHHhCccccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 011222222222111111223568899999999999999999999875
No 55
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.9e-41 Score=361.93 Aligned_cols=262 Identities=23% Similarity=0.379 Sum_probs=207.0
Q ss_pred hcCCCCCCeeccCCCceEEEEEe------CCCcEEEEEEecccccccccHHHHHHHHHHHHcc-CCCceeEEEeEeccCC
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAEL------PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRL-RHGNIVELIGYCNEHG 511 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~------~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~ 511 (720)
.++|...+.||+|+||+||+|.. .++..||||++.... .....+.+.+|+++++++ +||||+++++++...+
T Consensus 44 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 122 (344)
T 1rjb_A 44 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA-DSSEREALMSELKMMTQLGSHENIVNLLGACTLSG 122 (344)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC-------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred HHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEeccccc-CHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCC
Confidence 46788889999999999999975 246789999997543 233446889999999999 9999999999999999
Q ss_pred eEEEEEeeCCCCCHHHHhhccchh-------------------ccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCC
Q 004994 512 QHLLVYDYGGNCTLHDLLHSDEEA-------------------HKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFK 572 (720)
Q Consensus 512 ~~~lv~e~~~~gsL~~~l~~~~~~-------------------~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlk 572 (720)
..++||||+++|+|.+++...... ...+++..+..++.++++||+|||+. +|+|||||
T Consensus 123 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dik 199 (344)
T 1rjb_A 123 PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDLA 199 (344)
T ss_dssp SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEETTCS
T ss_pred ccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCC
Confidence 999999999999999999753211 13478999999999999999999997 99999999
Q ss_pred CCCeEEcCCCCeEEccccCCCCCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCC
Q 004994 573 SSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSR 650 (720)
Q Consensus 573 p~NiLl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~ 650 (720)
|+|||++.++.+||+|||+++...............++..|+|||.. .+.++.++|||||||++|||+| |+.||....
T Consensus 200 p~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 279 (344)
T 1rjb_A 200 ARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIP 279 (344)
T ss_dssp GGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred hhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCC
Confidence 99999999999999999999877544433334455677889999987 6679999999999999999998 999997543
Q ss_pred CccccchhhhcccccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhC
Q 004994 651 PRGEQSLVRWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCMI 720 (720)
Q Consensus 651 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~ 720 (720)
.... .... +..-..+. .+...+.++.+++.+||+.||.+|||+.|++++|+.++
T Consensus 280 ~~~~--~~~~----------~~~~~~~~----~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~ 333 (344)
T 1rjb_A 280 VDAN--FYKL----------IQNGFKMD----QPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQL 333 (344)
T ss_dssp CSHH--HHHH----------HHTTCCCC----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred cHHH--HHHH----------HhcCCCCC----CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHH
Confidence 2211 0000 00000111 11123467889999999999999999999999999864
No 56
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=2.5e-41 Score=363.06 Aligned_cols=255 Identities=20% Similarity=0.260 Sum_probs=205.0
Q ss_pred HHhcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEE
Q 004994 437 QYTNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLL 515 (720)
Q Consensus 437 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~l 515 (720)
.+.++|...+.||+|+||.||+|.. .+|+.||+|++..........+.+.+|++++++++|||||++++++.+.+..++
T Consensus 26 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~l 105 (362)
T 2bdw_A 26 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYL 105 (362)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred CcccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence 3456788999999999999999965 468999999997654444455778999999999999999999999999999999
Q ss_pred EEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCC---CCeEEccccCC
Q 004994 516 VYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEK---LIVRVSDCGLA 592 (720)
Q Consensus 516 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~---~~~kl~DFGla 592 (720)
||||+++|+|.+.+.. ...+++.....++.++++||.|||+. +|+||||||+|||++.+ +.+||+|||++
T Consensus 106 v~e~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a 178 (362)
T 2bdw_A 106 VFDLVTGGELFEDIVA----REFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA 178 (362)
T ss_dssp EECCCCSCBHHHHHTT----CSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred EEecCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEeecCcc
Confidence 9999999999998853 34688999999999999999999997 99999999999999865 45999999999
Q ss_pred CCCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhh
Q 004994 593 PLLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDAL 671 (720)
Q Consensus 593 ~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (720)
+...... ......++++|+|||.+ ...++.++|||||||++|||++|+.||...........+...
T Consensus 179 ~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~---------- 245 (362)
T 2bdw_A 179 IEVNDSE---AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAG---------- 245 (362)
T ss_dssp BCCTTCC---SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT----------
T ss_pred eEecCCc---ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhC----------
Confidence 8764332 22345689999999998 447999999999999999999999999754321111100000
Q ss_pred hhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 672 SRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 672 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
............+.++.+++.+||+.||++|||+.|++++
T Consensus 246 ----~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 246 ----AYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp ----CCCCCTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred ----CCCCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0000111112334678899999999999999999999875
No 57
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=1.8e-41 Score=356.80 Aligned_cols=262 Identities=24% Similarity=0.348 Sum_probs=209.9
Q ss_pred hcCCCCCCeeccCCCceEEEEEe------CCCcEEEEEEecccccccccHHHHHHHHHHHHcc-CCCceeEEEeEeccCC
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAEL------PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRL-RHGNIVELIGYCNEHG 511 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~------~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~ 511 (720)
.++|...+.||+|+||.||+|.. .+++.||||++..... ....+.+.+|+++++++ +||||+++++++.+.+
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~ 100 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAH-LTEREALMSELKVLSYLGNHMNIVNLLGACTIGG 100 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCC-HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchh-HHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCC
Confidence 35678889999999999999964 3578999999975432 33457899999999999 9999999999999999
Q ss_pred eEEEEEeeCCCCCHHHHhhccch--------------hccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeE
Q 004994 512 QHLLVYDYGGNCTLHDLLHSDEE--------------AHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNIL 577 (720)
Q Consensus 512 ~~~lv~e~~~~gsL~~~l~~~~~--------------~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiL 577 (720)
..++||||+++|+|.+++..... ....+++..+..++.++++||+|||+. +|+||||||+|||
T Consensus 101 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil 177 (313)
T 1t46_A 101 PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNIL 177 (313)
T ss_dssp SCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEE
T ss_pred CcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEE
Confidence 99999999999999999964321 123589999999999999999999997 9999999999999
Q ss_pred EcCCCCeEEccccCCCCCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCcccc
Q 004994 578 LDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQ 655 (720)
Q Consensus 578 l~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~ 655 (720)
++.++.+||+|||+++...............++..|+|||.. ...++.++|||||||++|||+| |+.||.........
T Consensus 178 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~ 257 (313)
T 1t46_A 178 LTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKF 257 (313)
T ss_dssp EETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHH
T ss_pred EcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhHH
Confidence 999999999999999877554433334445677889999987 6679999999999999999999 99999754322110
Q ss_pred chhhhcccccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhC
Q 004994 656 SLVRWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCMI 720 (720)
Q Consensus 656 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~ 720 (720)
.. .......... +...+.++.+++.+||+.||.+|||++|++++|++++
T Consensus 258 --~~----------~~~~~~~~~~----~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 306 (313)
T 1t46_A 258 --YK----------MIKEGFRMLS----PEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQI 306 (313)
T ss_dssp --HH----------HHHHTCCCCC----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred --HH----------HhccCCCCCC----cccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHH
Confidence 00 0011111111 1123457889999999999999999999999999863
No 58
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=6.4e-41 Score=354.94 Aligned_cols=253 Identities=20% Similarity=0.303 Sum_probs=204.2
Q ss_pred hcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccc----cccHHHHHHHHHHHHccCCCceeEEEeEeccCCeE
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQ----RQTDEEFLELASTISRLRHGNIVELIGYCNEHGQH 513 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~----~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~ 513 (720)
.+.|...+.||+|+||+||+|.. .+|+.||+|++...... ....+.+.+|++++++++||||+++++++.+.+..
T Consensus 10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 89 (326)
T 2y0a_A 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89 (326)
T ss_dssp HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 45688889999999999999965 46899999999754322 12467899999999999999999999999999999
Q ss_pred EEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCC----CeEEccc
Q 004994 514 LLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKL----IVRVSDC 589 (720)
Q Consensus 514 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~----~~kl~DF 589 (720)
++||||+++++|.+++.. ...+++..+..++.++++||.|||+. +|+||||||+|||++.++ .+||+||
T Consensus 90 ~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Df 162 (326)
T 2y0a_A 90 ILILELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDF 162 (326)
T ss_dssp EEEEECCCSCBHHHHHTT----SSCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSCCEEECCC
T ss_pred EEEEEcCCCCCHHHHHHh----cCCcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCCCEEEEEC
Confidence 999999999999999853 34689999999999999999999987 999999999999999887 8999999
Q ss_pred cCCCCCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCch
Q 004994 590 GLAPLLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDI 668 (720)
Q Consensus 590 Gla~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~ 668 (720)
|+++...... ......+++.|+|||.+ ...++.++|||||||++|||++|+.||...........+..
T Consensus 163 g~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~-------- 231 (326)
T 2y0a_A 163 GLAHKIDFGN---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSA-------- 231 (326)
T ss_dssp TTCEECCTTS---CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHH--------
T ss_pred CCCeECCCCC---ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHh--------
Confidence 9998764322 12335689999999998 45799999999999999999999999965332111100000
Q ss_pred hhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 669 DALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 669 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.............+..+.+++.+||+.||++|||++|++++
T Consensus 232 ------~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 272 (326)
T 2y0a_A 232 ------VNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272 (326)
T ss_dssp ------TCCCCCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred ------cCCCcCccccccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 01111112222334678899999999999999999999975
No 59
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=2.4e-41 Score=378.29 Aligned_cols=256 Identities=25% Similarity=0.406 Sum_probs=207.9
Q ss_pred hcCCCCCCeeccCCCceEEEEEeC-CCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEE
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVY 517 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 517 (720)
.++|...+.||+|+||+||+|.+. ++..||||+++... ...++|.+|++++++++|||||+++++|.+.+..++||
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 295 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT---MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 295 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS---SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc---cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEE
Confidence 345777889999999999999775 48899999997542 34678999999999999999999999999999999999
Q ss_pred eeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCC
Q 004994 518 DYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFS 597 (720)
Q Consensus 518 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~ 597 (720)
||+++|+|.+++... ....+++..+..++.|+++||+|||+. +||||||||+|||++.++.+||+|||+++....
T Consensus 296 E~~~~g~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 370 (495)
T 1opk_A 296 EFMTYGNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTG 370 (495)
T ss_dssp ECCTTCBHHHHHHHS--CTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCEECCTT
T ss_pred EccCCCCHHHHHHhc--CcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecccceeccC
Confidence 999999999999643 234688999999999999999999997 999999999999999999999999999987643
Q ss_pred CCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcccccCchhhhhhhc
Q 004994 598 GSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMV 675 (720)
Q Consensus 598 ~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (720)
.. ........++..|+|||.+ .+.++.++|||||||++|||+| |+.||...........+ .
T Consensus 371 ~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~~-------------~--- 433 (495)
T 1opk_A 371 DT-YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL-------------E--- 433 (495)
T ss_dssp CC-EECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHH-------------H---
T ss_pred Cc-eeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHH-------------H---
Confidence 22 1222334456789999998 5678999999999999999999 99999754322111100 0
Q ss_pred CCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhC
Q 004994 676 DPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCMI 720 (720)
Q Consensus 676 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~ 720 (720)
.......+..++.++.+++.+||+.||++|||+.||++.|++++
T Consensus 434 -~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~ 477 (495)
T 1opk_A 434 -KDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 477 (495)
T ss_dssp -TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred -cCCCCCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHH
Confidence 01111112233467889999999999999999999999999864
No 60
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=7.6e-41 Score=350.05 Aligned_cols=263 Identities=21% Similarity=0.298 Sum_probs=199.9
Q ss_pred HhcCCCCCCeeccCCCceEEEEEeCCCcEEEEEEecccccccccHHHHHHHHHHHHc--cCCCceeEEEeEecc----CC
Q 004994 438 YTNSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISR--LRHGNIVELIGYCNE----HG 511 (720)
Q Consensus 438 ~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~--l~H~niv~l~~~~~~----~~ 511 (720)
..++|...+.||+|+||+||+|.. +|+.||||++... ....+..|.+++.. ++||||+++++++.+ ..
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~-----~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~ 79 (301)
T 3q4u_A 6 VARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR-----DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSST 79 (301)
T ss_dssp CGGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG-----GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEE
T ss_pred ccCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc-----cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCc
Confidence 356788899999999999999987 6899999998642 34556667777766 799999999998643 35
Q ss_pred eEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhc-----CCCCeeecCCCCCCeEEcCCCCeEE
Q 004994 512 QHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEV-----CEPPIVHGNFKSSNILLDEKLIVRV 586 (720)
Q Consensus 512 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~-----~~~~ivHrDlkp~NiLl~~~~~~kl 586 (720)
..++||||+++|+|.++++. ..+++..+.+++.++++||+|||.. +.++|+||||||+|||++.++.+||
T Consensus 80 ~~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl 154 (301)
T 3q4u_A 80 QLWLITHYHEMGSLYDYLQL-----TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCI 154 (301)
T ss_dssp EEEEEECCCTTCBHHHHHTT-----CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEE
T ss_pred eeEEehhhccCCCHHHHHhh-----cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEE
Confidence 68999999999999999953 4689999999999999999999921 1349999999999999999999999
Q ss_pred ccccCCCCCCCCCCcc--cccCccccccCCCCccCCCC-------CCCccchHhHHHHHHHHHhC----------CCCCC
Q 004994 587 SDCGLAPLLFSGSTNE--LSEGLLTAHGSGAPEFESGS-------YSCQSDVYSLGVVMLELLTG----------RKPYD 647 (720)
Q Consensus 587 ~DFGla~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~-------~~~~~Dv~S~Gvvl~elltG----------~~Pf~ 647 (720)
+|||+|+......... ......++..|+|||.+.+. ++.++|||||||++|||+|| +.||.
T Consensus 155 ~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~ 234 (301)
T 3q4u_A 155 ADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFY 234 (301)
T ss_dssp CCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTT
T ss_pred eeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCcccccccccccc
Confidence 9999997664332211 12234688999999988442 44789999999999999999 77775
Q ss_pred CCCCcccc-chhhhcccccCchhhhhhhcCCCCC-chhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 648 RSRPRGEQ-SLVRWAIPRLHDIDALSRMVDPSLD-GAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 648 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
........ ...... .......+... .......+.++.+++.+||+.||++|||++||++.|+++
T Consensus 235 ~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 235 DVVPNDPSFEDMRKV--------VCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp TTSCSSCCHHHHHHH--------HTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred ccCCCCcchhhhhHH--------HhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 43222111 000000 00001111222 123445678899999999999999999999999999975
No 61
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=2.3e-41 Score=374.83 Aligned_cols=255 Identities=24% Similarity=0.363 Sum_probs=206.0
Q ss_pred hcCCCCCCeeccCCCceEEEEEeCCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEe
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYD 518 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 518 (720)
.++|...+.||+|+||+||+|...++..||||+++... ...+.|.+|++++++++|||||++++++. .+..++|||
T Consensus 187 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e 262 (454)
T 1qcf_A 187 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS---MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITE 262 (454)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS---BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEC
T ss_pred hHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC---ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEe
Confidence 45677789999999999999999888999999997542 35678999999999999999999999987 557899999
Q ss_pred eCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCC
Q 004994 519 YGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSG 598 (720)
Q Consensus 519 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~ 598 (720)
|+++|+|.++++... ...+++..+..++.++++||+|||+. +||||||||+|||++.++.+||+|||+++.....
T Consensus 263 ~~~~g~L~~~l~~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~ 337 (454)
T 1qcf_A 263 FMAKGSLLDFLKSDE--GSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDN 337 (454)
T ss_dssp CCTTCBHHHHHHSHH--HHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCH
T ss_pred ecCCCcHHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCCceEcCCC
Confidence 999999999997432 34578889999999999999999997 8999999999999999999999999999876432
Q ss_pred CCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcccccCchhhhhhhcC
Q 004994 599 STNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVD 676 (720)
Q Consensus 599 ~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (720)
. ........++..|+|||.+ .+.++.++|||||||++|||+| |+.||...........+ ..-..
T Consensus 338 ~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i-------------~~~~~ 403 (454)
T 1qcf_A 338 E-YTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRAL-------------ERGYR 403 (454)
T ss_dssp H-HHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHH-------------HHTCC
T ss_pred c-eeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHH-------------HcCCC
Confidence 1 1112234456789999998 5779999999999999999999 99999754321111000 00000
Q ss_pred CCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhC
Q 004994 677 PSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCMI 720 (720)
Q Consensus 677 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~ 720 (720)
. ..+..+++++.+++.+||+.||++|||+++|++.|+++.
T Consensus 404 ~----~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~ 443 (454)
T 1qcf_A 404 M----PRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFY 443 (454)
T ss_dssp C----CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSS
T ss_pred C----CCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHH
Confidence 0 011233467889999999999999999999999999863
No 62
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=1.8e-41 Score=352.76 Aligned_cols=267 Identities=20% Similarity=0.293 Sum_probs=200.3
Q ss_pred cCCCCCCeeccCCCceEEEEEeCCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEee
Q 004994 440 NSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDY 519 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 519 (720)
++|...+.||+|+||+||+|...+|+.||+|++..........+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 46778899999999999999888899999999975544444457788999999999999999999999999999999999
Q ss_pred CCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCC
Q 004994 520 GGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGS 599 (720)
Q Consensus 520 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~ 599 (720)
+++ +|.+++... ...+++.....++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 82 ~~~-~l~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 154 (288)
T 1ob3_A 82 LDQ-DLKKLLDVC---EGGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPV 154 (288)
T ss_dssp CSE-EHHHHHHTS---TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC--
T ss_pred cCC-CHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECccccccCccc
Confidence 986 898888543 34688899999999999999999997 99999999999999999999999999997653221
Q ss_pred CcccccCccccccCCCCccCC--CCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccc-hhhhc-ccccCchhhhhh--
Q 004994 600 TNELSEGLLTAHGSGAPEFES--GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQS-LVRWA-IPRLHDIDALSR-- 673 (720)
Q Consensus 600 ~~~~~~~~~~~~~~~aPE~~~--~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~-~~~~~-~~~~~~~~~~~~-- 673 (720)
.......++..|+|||.+. ..++.++|||||||++|||+||+.||.......... +.+.. .+....+....+
T Consensus 155 --~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (288)
T 1ob3_A 155 --RKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELP 232 (288)
T ss_dssp ---------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGST
T ss_pred --cccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhccc
Confidence 1122345788999999874 358999999999999999999999997543221111 00000 000000000000
Q ss_pred hcCCCC-------CchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 674 MVDPSL-------DGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 674 ~~~~~~-------~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
..++.. ........++++.+++.+||+.||++|||++|++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 281 (288)
T 1ob3_A 233 KYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH 281 (288)
T ss_dssp TCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 001100 011112234678899999999999999999999875
No 63
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=9.1e-41 Score=347.10 Aligned_cols=253 Identities=28% Similarity=0.403 Sum_probs=200.3
Q ss_pred cCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEeccccccccc-----HHHHHHHHHHHHccCCCceeEEEeEeccCCeE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQT-----DEEFLELASTISRLRHGNIVELIGYCNEHGQH 513 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~-----~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~ 513 (720)
++|...+.||+|+||+||+|.. .+++.||||++......... .+.+.+|++++++++||||+++++++.+..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-- 96 (287)
T 4f0f_A 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP-- 96 (287)
T ss_dssp TTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--
T ss_pred ccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--
Confidence 5677889999999999999965 57899999998654322221 167899999999999999999999997765
Q ss_pred EEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCC--eeecCCCCCCeEEcCCCC-----eEE
Q 004994 514 LLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPP--IVHGNFKSSNILLDEKLI-----VRV 586 (720)
Q Consensus 514 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~--ivHrDlkp~NiLl~~~~~-----~kl 586 (720)
++||||+++|+|.+.+... ...+++..+..++.++++||+|||+. + |+||||||+|||++.++. +||
T Consensus 97 ~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~~~~~~~kl 170 (287)
T 4f0f_A 97 RMVMEFVPCGDLYHRLLDK---AHPIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDENAPVCAKV 170 (287)
T ss_dssp EEEEECCTTCBHHHHHHCT---TSCCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCTTCSCCEEE
T ss_pred eEEEEecCCCCHHHHHhcc---cCCccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCCCCceeEEe
Confidence 6999999999999888543 35689999999999999999999987 6 999999999999988776 999
Q ss_pred ccccCCCCCCCCCCcccccCccccccCCCCccCC---CCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhccc
Q 004994 587 SDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFES---GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIP 663 (720)
Q Consensus 587 ~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~---~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~ 663 (720)
+|||+++..... .....++..|+|||.+. ..++.++|||||||++|||++|+.||.......... ..
T Consensus 171 ~Dfg~~~~~~~~-----~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~-~~---- 240 (287)
T 4f0f_A 171 ADFGLSQQSVHS-----VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKF-IN---- 240 (287)
T ss_dssp CCCTTCBCCSSC-----EECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHH-HH----
T ss_pred CCCCcccccccc-----ccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHH-HH----
Confidence 999999754321 23356789999999872 347889999999999999999999997543221100 00
Q ss_pred ccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 664 RLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 664 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
.+.........+...++++.+++.+||+.||++|||++|+++.|++|
T Consensus 241 ---------~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 241 ---------MIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp ---------HHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred ---------HHhccCCCCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 00000111111223346788999999999999999999999999875
No 64
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.9e-40 Score=350.33 Aligned_cols=272 Identities=17% Similarity=0.225 Sum_probs=207.5
Q ss_pred hcCCCCCCeeccCCCceEEEEEeC-CCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCC--eEEE
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHG--QHLL 515 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~--~~~l 515 (720)
.++|...+.||+|+||+||+|... +|+.||||++..... ....+.+.+|++++++++||||+++++++.+.+ ..++
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 86 (319)
T 4euu_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF-LRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVL 86 (319)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG-GSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEE
T ss_pred CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccc-cchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEE
Confidence 356888899999999999999664 589999999975432 334577889999999999999999999987654 7899
Q ss_pred EEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEE----cCCCCeEEccccC
Q 004994 516 VYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILL----DEKLIVRVSDCGL 591 (720)
Q Consensus 516 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl----~~~~~~kl~DFGl 591 (720)
||||+++++|.+++.... ....+++..+..++.++++||+|||+. +|+||||||+|||+ +.++.+||+|||+
T Consensus 87 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~ 162 (319)
T 4euu_A 87 IMEFCPCGSLYTVLEEPS-NAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGA 162 (319)
T ss_dssp EEECCTTCBHHHHHHSGG-GTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECCCTT
T ss_pred EEeCCCCCCHHHHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEccCCC
Confidence 999999999999997542 223489999999999999999999997 99999999999999 8888899999999
Q ss_pred CCCCCCCCCcccccCccccccCCCCccC---------CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccc-cchhhhc
Q 004994 592 APLLFSGSTNELSEGLLTAHGSGAPEFE---------SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGE-QSLVRWA 661 (720)
Q Consensus 592 a~~~~~~~~~~~~~~~~~~~~~~aPE~~---------~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~-~~~~~~~ 661 (720)
++....... .....++..|+|||.+ ...++.++|||||||++|||+||+.||........ .......
T Consensus 163 a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~ 239 (319)
T 4euu_A 163 ARELEDDEQ---FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKI 239 (319)
T ss_dssp CEECCTTCC---BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHH
T ss_pred ceecCCCCc---eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHH
Confidence 987644322 2235688999999986 35689999999999999999999999964332111 1111000
Q ss_pred c-cccC-chhhhhhh------cCCC--CCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q 004994 662 I-PRLH-DIDALSRM------VDPS--LDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLC 718 (720)
Q Consensus 662 ~-~~~~-~~~~~~~~------~~~~--~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 718 (720)
. .... ....+... ..+. ............+.+++.+||+.||++|||++|++++..+
T Consensus 240 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d 306 (319)
T 4euu_A 240 ITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSD 306 (319)
T ss_dssp HHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHH
T ss_pred hcCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHH
Confidence 0 0000 00000000 0000 1112345667789999999999999999999999999875
No 65
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=4.8e-41 Score=348.97 Aligned_cols=255 Identities=22% Similarity=0.284 Sum_probs=201.6
Q ss_pred hcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEE
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVY 517 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 517 (720)
.+.|...+.||+|+||+||+|.. .++..||+|++..... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 99 (285)
T 3is5_A 21 DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRS-QVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVM 99 (285)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGC-CSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhheeecceeccCCCeEEEEEEEccCCceEEEEEeecccc-chhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEE
Confidence 45678889999999999999965 5689999999975432 345678999999999999999999999999999999999
Q ss_pred eeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEE---cCCCCeEEccccCCCC
Q 004994 518 DYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILL---DEKLIVRVSDCGLAPL 594 (720)
Q Consensus 518 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl---~~~~~~kl~DFGla~~ 594 (720)
||+++|+|.+++.........+++..+..++.++++||+|||+. +|+||||||+|||+ +.++.+||+|||+++.
T Consensus 100 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~ 176 (285)
T 3is5_A 100 ETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAEL 176 (285)
T ss_dssp CCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC
T ss_pred EeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEeeeccee
Confidence 99999999999865544456799999999999999999999997 99999999999999 4567899999999987
Q ss_pred CCCCCCcccccCccccccCCCCccCCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhh
Q 004994 595 LFSGSTNELSEGLLTAHGSGAPEFESGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRM 674 (720)
Q Consensus 595 ~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (720)
..... ......++..|+|||.+.+.++.++|||||||++|||++|+.||...............
T Consensus 177 ~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~------------- 240 (285)
T 3is5_A 177 FKSDE---HSTNAAGTALYMAPEVFKRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYK------------- 240 (285)
T ss_dssp -------------CTTGGGCCHHHHTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC-------------
T ss_pred cCCcc---cCcCcccccCcCChHHhccCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhccC-------------
Confidence 64322 22345678999999999888999999999999999999999999754322111111110
Q ss_pred cCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 675 VDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 675 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.+.... .....++++.+++.+||+.||++|||++|++++
T Consensus 241 -~~~~~~-~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 279 (285)
T 3is5_A 241 -EPNYAV-ECRPLTPQAVDLLKQMLTKDPERRPSAAQVLHH 279 (285)
T ss_dssp -CCCCCC---CCCCHHHHHHHHHHTCSCTTTSCCHHHHHTS
T ss_pred -Cccccc-ccCcCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000000 000123567899999999999999999999874
No 66
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=1.9e-41 Score=358.99 Aligned_cols=256 Identities=26% Similarity=0.374 Sum_probs=199.7
Q ss_pred cCCCCCCeeccCCCceEEEEEe-CCCcE----EEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL-PGGKL----LAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHL 514 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~----vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~ 514 (720)
++|...+.||+|+||+||+|.. .+++. ||+|.+.... .....+.+.+|+.++++++||||+++++++.+ +..+
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~ 90 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKS-GRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPG-SSLQ 90 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTT-SCSCBCSCCHHHHHHHTCCCTTBCCEEEEECB-SSEE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccc-cHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcC-CccE
Confidence 4677789999999999999965 44554 7888775432 12333467789999999999999999999864 5689
Q ss_pred EEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCC
Q 004994 515 LVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPL 594 (720)
Q Consensus 515 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~ 594 (720)
+||||+++|+|.+++... ...+++..+..++.++++||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 91 ~v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~ 164 (325)
T 3kex_A 91 LVTQYLPLGSLLDHVRQH---RGALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADL 164 (325)
T ss_dssp EEEECCTTCBSHHHHHSS---GGGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECSCSGGGG
T ss_pred EEEEeCCCCCHHHHHHHc---cccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECCCCcccc
Confidence 999999999999998643 34688899999999999999999997 899999999999999999999999999988
Q ss_pred CCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcccccCchhhhh
Q 004994 595 LFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALS 672 (720)
Q Consensus 595 ~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (720)
+.............++.+|+|||.+ .+.++.++|||||||++|||+| |+.||...........+....
T Consensus 165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~---------- 234 (325)
T 3kex_A 165 LPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGE---------- 234 (325)
T ss_dssp SCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHHHTTC----------
T ss_pred cCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHHHcCC----------
Confidence 7554444344456678899999998 5679999999999999999999 999997644322111111100
Q ss_pred hhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhC
Q 004994 673 RMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCMI 720 (720)
Q Consensus 673 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~ 720 (720)
... .+..++.++.+++.+||+.||++|||++|++++|+++.
T Consensus 235 ~~~-------~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~ 275 (325)
T 3kex_A 235 RLA-------QPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMA 275 (325)
T ss_dssp BCC-------CCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHT
T ss_pred CCC-------CCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 000 01112235679999999999999999999999998763
No 67
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=7.1e-41 Score=350.01 Aligned_cols=251 Identities=21% Similarity=0.273 Sum_probs=193.7
Q ss_pred hcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEeccccccc------------------------ccHHHHHHHHHHHH
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQR------------------------QTDEEFLELASTIS 493 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~------------------------~~~~~~~~e~~~l~ 493 (720)
.++|...+.||+|+||+||+|.. .+++.||||++....... ...+.+.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 35788889999999999999965 578999999996542111 12356899999999
Q ss_pred ccCCCceeEEEeEecc--CCeEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCC
Q 004994 494 RLRHGNIVELIGYCNE--HGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNF 571 (720)
Q Consensus 494 ~l~H~niv~l~~~~~~--~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDl 571 (720)
+++||||+++++++.+ .+..++||||+++++|.+++. ...+++..+..++.|+++||+|||+. +|+||||
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dl 163 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT-----LKPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDI 163 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC-----SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCC
Confidence 9999999999999976 568999999999999987653 24689999999999999999999997 9999999
Q ss_pred CCCCeEEcCCCCeEEccccCCCCCCCCCCcccccCccccccCCCCccCCCC----CCCccchHhHHHHHHHHHhCCCCCC
Q 004994 572 KSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFESGS----YSCQSDVYSLGVVMLELLTGRKPYD 647 (720)
Q Consensus 572 kp~NiLl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~----~~~~~Dv~S~Gvvl~elltG~~Pf~ 647 (720)
||+|||++.++.+||+|||+++...... .......++..|+|||...+. ++.++|||||||++|||++|+.||.
T Consensus 164 kp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~ 241 (298)
T 2zv2_A 164 KPSNLLVGEDGHIKIADFGVSNEFKGSD--ALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFM 241 (298)
T ss_dssp CGGGEEECTTSCEEECCCTTCEECSSSS--CEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSC
T ss_pred CHHHEEECCCCCEEEecCCCcccccccc--ccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCC
Confidence 9999999999999999999998764322 122345688999999998543 3778999999999999999999997
Q ss_pred CCCCccccchhhhcccccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 648 RSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 648 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
..........+. ....... .....++++.+++.+||+.||++|||++|++++
T Consensus 242 ~~~~~~~~~~~~------------~~~~~~~----~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~h 293 (298)
T 2zv2_A 242 DERIMCLHSKIK------------SQALEFP----DQPDIAEDLKDLITRMLDKNPESRIVVPEIKLH 293 (298)
T ss_dssp CSSHHHHHHHHH------------HCCCCCC----SSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTC
T ss_pred CccHHHHHHHHh------------cccCCCC----CccccCHHHHHHHHHHhhcChhhCCCHHHHhcC
Confidence 532211100000 0000000 001223568899999999999999999999865
No 68
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=7.4e-41 Score=348.27 Aligned_cols=261 Identities=30% Similarity=0.451 Sum_probs=195.4
Q ss_pred hcCCCCCCeeccCCCceEEEEEeCCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEe
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYD 518 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 518 (720)
.++|...+.||+|+||+||+|.... .||||+++.........+.|.+|++++++++||||+++++++. .+..++|||
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~~--~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e 99 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-APQLAIVTQ 99 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESSS--EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEE
T ss_pred ccceeeeeEecCCCCeEEEEEEEcC--ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeecc-CCccEEEEE
Confidence 4578888999999999999997643 5999999765555556678999999999999999999999764 456899999
Q ss_pred eCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCC
Q 004994 519 YGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSG 598 (720)
Q Consensus 519 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~ 598 (720)
|+++++|.+++... ...+++..+..++.+++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 100 ~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 173 (289)
T 3og7_A 100 WCEGSSLYHHLHAS---ETKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRW 173 (289)
T ss_dssp CCCEEEHHHHHTTC------CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC--------
T ss_pred ecCCCcHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccceeccccccc
Confidence 99999999998643 35689999999999999999999997 9999999999999999999999999999866433
Q ss_pred CCcccccCccccccCCCCccC----CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhh
Q 004994 599 STNELSEGLLTAHGSGAPEFE----SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRM 674 (720)
Q Consensus 599 ~~~~~~~~~~~~~~~~aPE~~----~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (720)
..........++..|+|||.+ ...++.++||||||+++|||++|+.||........ ...... ...
T Consensus 174 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~--~~~~~~---------~~~ 242 (289)
T 3og7_A 174 SGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ--IIEMVG---------RGS 242 (289)
T ss_dssp ----------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHH--HHHHHH---------HTS
T ss_pred cccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHH--HHHHhc---------ccc
Confidence 222233345688999999987 34578899999999999999999999975432211 111000 000
Q ss_pred cCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhC
Q 004994 675 VDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCMI 720 (720)
Q Consensus 675 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~ 720 (720)
..+... .....++.++.+++.+||+.||++|||++|+++.|+++.
T Consensus 243 ~~~~~~-~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~ 287 (289)
T 3og7_A 243 LSPDLS-KVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELA 287 (289)
T ss_dssp CCCCTT-SSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred cCcchh-hccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHh
Confidence 111110 011223467899999999999999999999999999874
No 69
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=6.4e-41 Score=345.14 Aligned_cols=254 Identities=29% Similarity=0.403 Sum_probs=192.4
Q ss_pred cCCCCCCeeccCCCceEEEEEeCCCcEEEEEEecccccc--cccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQ--RQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVY 517 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 517 (720)
++|...+.||+|+||.||+|... |+.||||++...... ....+.+.+|+++++.++||||+++++++.+.+..++||
T Consensus 7 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 85 (271)
T 3dtc_A 7 AELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVM 85 (271)
T ss_dssp TSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEE
T ss_pred hheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEE
Confidence 56778899999999999999864 889999998754322 234578899999999999999999999999999999999
Q ss_pred eeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcC--------CCCeEEccc
Q 004994 518 DYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDE--------KLIVRVSDC 589 (720)
Q Consensus 518 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~--------~~~~kl~DF 589 (720)
||+++++|.+++. ...+++..+..++.++++||+|||+....+|+||||||+|||++. ++.+||+||
T Consensus 86 e~~~~~~L~~~~~-----~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Df 160 (271)
T 3dtc_A 86 EFARGGPLNRVLS-----GKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDF 160 (271)
T ss_dssp ECCTTEEHHHHHT-----SSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCC
T ss_pred EcCCCCCHHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccC
Confidence 9999999999885 246889999999999999999999973233999999999999986 778999999
Q ss_pred cCCCCCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCch
Q 004994 590 GLAPLLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDI 668 (720)
Q Consensus 590 Gla~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~ 668 (720)
|+++...... .....++..|+|||.. ...++.++||||||+++|||+||+.||..........
T Consensus 161 g~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~------------ 224 (271)
T 3dtc_A 161 GLAREWHRTT----KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAY------------ 224 (271)
T ss_dssp CC-----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHH------------
T ss_pred Cccccccccc----ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH------------
Confidence 9998664322 1234678899999988 5678999999999999999999999997543211100
Q ss_pred hhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 669 DALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 669 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
...........+...++++.+++.+||+.||++|||+.|++++|++|
T Consensus 225 ----~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 225 ----GVAMNKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp ----HHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred ----hhhcCCCCCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 00000111111122346788999999999999999999999999875
No 70
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=2.1e-41 Score=353.50 Aligned_cols=269 Identities=21% Similarity=0.274 Sum_probs=201.1
Q ss_pred hcCCCCCCeeccCCCceEEEEEe-----CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEecc--CC
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAEL-----PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNE--HG 511 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~-----~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~--~~ 511 (720)
.++|+..+.||+|+||+||+|++ .+++.||||++... .....+.+.+|++++++++||||+++++++.. ..
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 86 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR 86 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCC--CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHT
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccC--CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCC
Confidence 35678889999999999999974 36899999999743 23445688999999999999999999999854 35
Q ss_pred eEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccC
Q 004994 512 QHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGL 591 (720)
Q Consensus 512 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGl 591 (720)
..++||||+++|+|.+++... ...+++..+..++.+++.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 87 ~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~ 160 (295)
T 3ugc_A 87 NLKLIMEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGL 160 (295)
T ss_dssp SCEEEEECCTTCBHHHHHHHC---GGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCS
T ss_pred ceEEEEEeCCCCCHHHHHHhc---ccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEccCcc
Confidence 689999999999999999643 34589999999999999999999987 999999999999999999999999999
Q ss_pred CCCCCCCCCc-ccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCch-
Q 004994 592 APLLFSGSTN-ELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDI- 668 (720)
Q Consensus 592 a~~~~~~~~~-~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~- 668 (720)
++........ .......++..|+|||.. ...++.++||||||+++|||+||..||...... ............
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~----~~~~~~~~~~~~~ 236 (295)
T 3ugc_A 161 TKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAE----FMRMIGNDKQGQM 236 (295)
T ss_dssp CC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHH----HHHHHCTTCCTHH
T ss_pred cccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHH----HHhhhcCccccch
Confidence 9876443221 122234466779999988 567999999999999999999999998642110 000000000000
Q ss_pred --hhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 669 --DALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 669 --~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
....+.+........+..++.++.+++.+||+.||++|||++|+++.|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l 289 (295)
T 3ugc_A 237 IVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 289 (295)
T ss_dssp HHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHH
T ss_pred hHHHHHHHHhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence 001111111111111223456789999999999999999999999999886
No 71
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=7.1e-41 Score=355.05 Aligned_cols=248 Identities=24% Similarity=0.332 Sum_probs=200.0
Q ss_pred hcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEeccccc-ccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEE
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVS-QRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLV 516 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 516 (720)
.++|...+.||+|+||+||+|.. .+|+.||||++.+... .....+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 87 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMV 87 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 35788889999999999999965 6799999999864322 122345788999999999999999999999999999999
Q ss_pred EeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCC
Q 004994 517 YDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLF 596 (720)
Q Consensus 517 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~ 596 (720)
|||+ +|+|.+++.. ...+++.....++.|++.||.|||+. +|+||||||+|||+++++.+||+|||+++...
T Consensus 88 ~E~~-~g~l~~~l~~----~~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~ 159 (336)
T 3h4j_B 88 IEYA-GGELFDYIVE----KKRMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMT 159 (336)
T ss_dssp ECCC-CEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSSCTBTTT
T ss_pred EECC-CCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEeccceecc
Confidence 9999 6789888853 35689999999999999999999998 99999999999999999999999999998764
Q ss_pred CCCCcccccCccccccCCCCccCCCC-C-CCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhh
Q 004994 597 SGSTNELSEGLLTAHGSGAPEFESGS-Y-SCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRM 674 (720)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~aPE~~~~~-~-~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (720)
... ......+++.|+|||.+.+. + +.++|||||||++|||++|+.||...........+....
T Consensus 160 ~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~------------ 224 (336)
T 3h4j_B 160 DGN---FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCV------------ 224 (336)
T ss_dssp TSB---TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBCCCCSSC------------
T ss_pred CCc---ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHHHHHcCC------------
Confidence 332 23345689999999998553 3 789999999999999999999997543222111110000
Q ss_pred cCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 675 VDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 675 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.. .+...+.++.+++.+||+.||.+|||++|++++
T Consensus 225 --~~----~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 259 (336)
T 3h4j_B 225 --YV----MPDFLSPGAQSLIRRMIVADPMQRITIQEIRRD 259 (336)
T ss_dssp --CC----CCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTC
T ss_pred --CC----CcccCCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence 00 011123567899999999999999999999865
No 72
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=6.7e-41 Score=349.12 Aligned_cols=267 Identities=18% Similarity=0.259 Sum_probs=200.4
Q ss_pred cCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEe
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYD 518 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 518 (720)
++|+..+.||+|+||+||+|.. .+|+.||||++..........+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 4678889999999999999965 568999999998655555556788999999999999999999999999999999999
Q ss_pred eCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCC
Q 004994 519 YGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSG 598 (720)
Q Consensus 519 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~ 598 (720)
|+++ ++.+.+.. ....+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 82 ~~~~-~l~~~~~~---~~~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 154 (292)
T 3o0g_A 82 FCDQ-DLKKYFDS---CNGDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIP 154 (292)
T ss_dssp CCSE-EHHHHHHH---TTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCSC
T ss_pred cCCC-CHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecCCc
Confidence 9986 55555532 235689999999999999999999997 9999999999999999999999999999876432
Q ss_pred CCcccccCccccccCCCCccCC-C-CCCCccchHhHHHHHHHHHhCCCCCCCCCCccc-cc-hhhhc-ccccCchhhhhh
Q 004994 599 STNELSEGLLTAHGSGAPEFES-G-SYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGE-QS-LVRWA-IPRLHDIDALSR 673 (720)
Q Consensus 599 ~~~~~~~~~~~~~~~~aPE~~~-~-~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~-~~-~~~~~-~~~~~~~~~~~~ 673 (720)
. .......++..|+|||... . .++.++|||||||++|||+||..||........ .. +.+.. .+....+.....
T Consensus 155 ~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 232 (292)
T 3o0g_A 155 V--RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTK 232 (292)
T ss_dssp C--SCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGG
T ss_pred c--ccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcc
Confidence 1 2223456788999999873 3 389999999999999999999888643322111 00 00000 000000000111
Q ss_pred hcCC---------CCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 674 MVDP---------SLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 674 ~~~~---------~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
..+. ............++.+++.+||+.||++|||++|+++|
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 283 (292)
T 3o0g_A 233 LPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH 283 (292)
T ss_dssp STTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred cccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 0000 00001112234678899999999999999999999975
No 73
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.5e-41 Score=356.00 Aligned_cols=250 Identities=19% Similarity=0.234 Sum_probs=203.3
Q ss_pred HhcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEE
Q 004994 438 YTNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLV 516 (720)
Q Consensus 438 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 516 (720)
+.++|...+.||+|+||+||+|.. .+++.||+|.+... ....+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 3 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv 79 (321)
T 1tki_A 3 LYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK---GTDQVLVKKEISILNIARHRNILHLHESFESMEELVMI 79 (321)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC---THHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEE
T ss_pred hhhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC---cccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEE
Confidence 356788899999999999999965 46899999998643 23456788999999999999999999999999999999
Q ss_pred EeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcC--CCCeEEccccCCCC
Q 004994 517 YDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDE--KLIVRVSDCGLAPL 594 (720)
Q Consensus 517 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~--~~~~kl~DFGla~~ 594 (720)
|||+++|+|.+++... ...+++..+..++.|+++||.|||+. +|+||||||+|||++. ++.+||+|||+++.
T Consensus 80 ~e~~~g~~L~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~ 153 (321)
T 1tki_A 80 FEFISGLDIFERINTS---AFELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQ 153 (321)
T ss_dssp ECCCCCCBHHHHHTSS---SCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEE
T ss_pred EEeCCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECCCCeE
Confidence 9999999999998542 34688999999999999999999997 9999999999999987 78999999999987
Q ss_pred CCCCCCcccccCccccccCCCCccCCC-CCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhh
Q 004994 595 LFSGSTNELSEGLLTAHGSGAPEFESG-SYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSR 673 (720)
Q Consensus 595 ~~~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (720)
+.... ......+++.|+|||...+ .++.++|||||||++|||++|+.||......... ..
T Consensus 154 ~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~----------------~~ 214 (321)
T 1tki_A 154 LKPGD---NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQII----------------EN 214 (321)
T ss_dssp CCTTC---EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHH----------------HH
T ss_pred CCCCC---ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHH----------------HH
Confidence 64432 2233567899999999854 5799999999999999999999999754321111 11
Q ss_pred hcCC--CCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 674 MVDP--SLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 674 ~~~~--~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
+... ..........+.++.+++.+||+.||++|||++|++++
T Consensus 215 i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~h 258 (321)
T 1tki_A 215 IMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQH 258 (321)
T ss_dssp HHHTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred HHcCCCCCChhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 1110 11111122334678899999999999999999999985
No 74
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=3.6e-41 Score=360.02 Aligned_cols=250 Identities=20% Similarity=0.263 Sum_probs=197.9
Q ss_pred hcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccc-cccccHHHHHHHHHHHHcc-CCCceeEEEeEeccCCeEEE
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTV-SQRQTDEEFLELASTISRL-RHGNIVELIGYCNEHGQHLL 515 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~-~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~l 515 (720)
.++|...+.||+|+||+||+|+. .+|+.||||++++.. ......+.+.+|.++++.+ +||||+++++++.+.+..++
T Consensus 22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 101 (353)
T 3txo_A 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFF 101 (353)
T ss_dssp -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEE
Confidence 46788899999999999999965 468999999997542 2234556788999999988 79999999999999999999
Q ss_pred EEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCC
Q 004994 516 VYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLL 595 (720)
Q Consensus 516 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~ 595 (720)
||||+++|+|.+++.. ...+++.....++.+++.||+|||+. +||||||||+|||++.++++||+|||+|+..
T Consensus 102 v~E~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~DFG~a~~~ 174 (353)
T 3txo_A 102 VMEFVNGGDLMFHIQK----SRRFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEG 174 (353)
T ss_dssp EEECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCS
T ss_pred EEeCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEccccceeec
Confidence 9999999999999853 35689999999999999999999997 9999999999999999999999999999864
Q ss_pred CCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhh
Q 004994 596 FSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRM 674 (720)
Q Consensus 596 ~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (720)
... ........||+.|+|||.+ ...|+.++|||||||++|||++|+.||.......... .+
T Consensus 175 ~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~----------------~i 236 (353)
T 3txo_A 175 ICN--GVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFE----------------AI 236 (353)
T ss_dssp CC-----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH----------------HH
T ss_pred ccC--CccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHH----------------HH
Confidence 322 1223346789999999998 4468999999999999999999999997543221111 11
Q ss_pred cCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCH------HHHHHH
Q 004994 675 VDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPM------SEIVQD 715 (720)
Q Consensus 675 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~------~evl~~ 715 (720)
..... .++.....++.+++.+||+.||++||++ +|+++|
T Consensus 237 ~~~~~--~~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~h 281 (353)
T 3txo_A 237 LNDEV--VYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRH 281 (353)
T ss_dssp HHCCC--CCCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTS
T ss_pred HcCCC--CCCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhhC
Confidence 11000 0111123567899999999999999998 777754
No 75
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.2e-40 Score=349.77 Aligned_cols=252 Identities=26% Similarity=0.435 Sum_probs=194.9
Q ss_pred cCCCCCCeeccCCCceEEEEEeCCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEee
Q 004994 440 NSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDY 519 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 519 (720)
++|...+.||+|+||+||+|... ++.||||++... ...+.|.+|++++++++||||+++++++.+ ..++||||
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e~ 80 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE----SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEY 80 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST----THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEEC
T ss_pred hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh----hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEEc
Confidence 46777899999999999999874 788999998642 345789999999999999999999999874 47899999
Q ss_pred CCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCC-eEEccccCCCCCCCC
Q 004994 520 GGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLI-VRVSDCGLAPLLFSG 598 (720)
Q Consensus 520 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~-~kl~DFGla~~~~~~ 598 (720)
+++|+|.+++.... ....+++..+..++.++++||+|||+.+..+|+||||||+|||++.++. +||+|||++......
T Consensus 81 ~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~ 159 (307)
T 2eva_A 81 AEGGSLYNVLHGAE-PLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH 159 (307)
T ss_dssp CTTCBHHHHHHCSS-SEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC-------
T ss_pred CCCCCHHHHHhccC-CCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc
Confidence 99999999997542 2345788899999999999999999965569999999999999998886 799999999765322
Q ss_pred CCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcCC
Q 004994 599 STNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDP 677 (720)
Q Consensus 599 ~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (720)
.....++..|+|||.. ...++.++|||||||++|||+||+.||........ . ..+. ......+
T Consensus 160 -----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~-~-~~~~---------~~~~~~~ 223 (307)
T 2eva_A 160 -----MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAF-R-IMWA---------VHNGTRP 223 (307)
T ss_dssp ----------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHH-H-HHHH---------HHTTCCC
T ss_pred -----cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHH-H-HHHH---------HhcCCCC
Confidence 1224578999999998 45789999999999999999999999975322110 0 0000 0000011
Q ss_pred CCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 678 SLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 678 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
.. ....+..+.+++.+||+.||++|||++|+++.|+.+
T Consensus 224 ~~----~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~ 261 (307)
T 2eva_A 224 PL----IKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHL 261 (307)
T ss_dssp CC----BTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred Cc----ccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence 11 112345688999999999999999999999999875
No 76
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=9.1e-41 Score=359.97 Aligned_cols=250 Identities=24% Similarity=0.304 Sum_probs=201.7
Q ss_pred cCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccc-cccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTV-SQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVY 517 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~-~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 517 (720)
++|...+.||+|+||+||+|.. .+++.||+|++.+.. ......+.+.+|+++++.++|||||++++++.+.+..++||
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~ 94 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV 94 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 5688889999999999999965 468999999996532 23345578899999999999999999999999999999999
Q ss_pred eeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCC
Q 004994 518 DYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFS 597 (720)
Q Consensus 518 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~ 597 (720)
||+.+|+|.+++.. ...+++..+..++.+++.||.|||+. +||||||||+|||++.++.+||+|||+|+.+..
T Consensus 95 e~~~gg~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 167 (384)
T 4fr4_A 95 DLLLGGDLRYHLQQ----NVHFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPR 167 (384)
T ss_dssp CCCTTEEHHHHHHT----TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred ecCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEeccceeeeccC
Confidence 99999999999853 34689999999999999999999997 999999999999999999999999999987643
Q ss_pred CCCcccccCccccccCCCCccCC----CCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhh
Q 004994 598 GSTNELSEGLLTAHGSGAPEFES----GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSR 673 (720)
Q Consensus 598 ~~~~~~~~~~~~~~~~~aPE~~~----~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (720)
.. ......||+.|+|||.+. ..|+.++|||||||++|||+||+.||................ .
T Consensus 168 ~~---~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~----------~ 234 (384)
T 4fr4_A 168 ET---QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFE----------T 234 (384)
T ss_dssp TC---CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHH----------H
T ss_pred CC---ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHh----------h
Confidence 22 233467899999999983 248999999999999999999999997543322111111100 0
Q ss_pred hcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCC-HHHHHH
Q 004994 674 MVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPP-MSEIVQ 714 (720)
Q Consensus 674 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt-~~evl~ 714 (720)
.... ++...+.++.+++.+||+.||++||+ ++++++
T Consensus 235 -~~~~----~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 235 -TVVT----YPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp -CCCC----CCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred -cccC----CCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 0000 11123467889999999999999998 777764
No 77
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=6.7e-41 Score=356.15 Aligned_cols=261 Identities=23% Similarity=0.386 Sum_probs=205.7
Q ss_pred hcCCCCCCeeccCCCceEEEEEe--------CCCcEEEEEEecccccccccHHHHHHHHHHHHcc-CCCceeEEEeEecc
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAEL--------PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRL-RHGNIVELIGYCNE 509 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~--------~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~ 509 (720)
.++|...+.||+|+||+||+|.. .++..||||++.... .....+.+.+|+++++++ +||||+++++++.+
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 112 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA-TEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 112 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCC-cHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEcc
Confidence 35677889999999999999975 346789999997543 234456789999999999 99999999999999
Q ss_pred CCeEEEEEeeCCCCCHHHHhhccch------------hccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeE
Q 004994 510 HGQHLLVYDYGGNCTLHDLLHSDEE------------AHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNIL 577 (720)
Q Consensus 510 ~~~~~lv~e~~~~gsL~~~l~~~~~------------~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiL 577 (720)
.+..++||||+++|+|.+++..... ....+++..+..++.++++||.|||+. +|+||||||+|||
T Consensus 113 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIl 189 (334)
T 2pvf_A 113 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVL 189 (334)
T ss_dssp SSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEE
T ss_pred CCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCccceEE
Confidence 9999999999999999999975421 123488999999999999999999997 9999999999999
Q ss_pred EcCCCCeEEccccCCCCCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCcccc
Q 004994 578 LDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQ 655 (720)
Q Consensus 578 l~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~ 655 (720)
++.++.+||+|||+++...............++..|+|||.. ...++.++|||||||++|||+| |+.||........
T Consensus 190 l~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~- 268 (334)
T 2pvf_A 190 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL- 268 (334)
T ss_dssp ECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHH-
T ss_pred EcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHH-
Confidence 999999999999999876543322223334567789999988 5668999999999999999999 9999975432111
Q ss_pred chhhhcccccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhC
Q 004994 656 SLVRWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCMI 720 (720)
Q Consensus 656 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~ 720 (720)
... +........ +...+.++.+++.+||+.||.+|||++|++++|++++
T Consensus 269 --~~~----------~~~~~~~~~----~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~ 317 (334)
T 2pvf_A 269 --FKL----------LKEGHRMDK----PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 317 (334)
T ss_dssp --HHH----------HHHTCCCCC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred --HHH----------HhcCCCCCC----CccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 100 000000111 1123457889999999999999999999999999863
No 78
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=1.8e-40 Score=352.16 Aligned_cols=254 Identities=18% Similarity=0.297 Sum_probs=198.6
Q ss_pred HhcCCCCCCeeccCCCceEEEEEeC-CCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCC-----
Q 004994 438 YTNSFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHG----- 511 (720)
Q Consensus 438 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~----- 511 (720)
+.++|+..+.||+|+||.||+|... +|+.||||++.... .....+.+.+|++++++++|||||+++++|.+..
T Consensus 4 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~ 82 (332)
T 3qd2_B 4 YLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPN-RELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQ 82 (332)
T ss_dssp HHHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCS-TTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHH
T ss_pred hhhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCC-chhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhh
Confidence 4567888899999999999999765 79999999997543 2345678999999999999999999999885433
Q ss_pred ----------------------------------------------------eEEEEEeeCCCCCHHHHhhccchhcccc
Q 004994 512 ----------------------------------------------------QHLLVYDYGGNCTLHDLLHSDEEAHKKF 539 (720)
Q Consensus 512 ----------------------------------------------------~~~lv~e~~~~gsL~~~l~~~~~~~~~~ 539 (720)
..++||||+++++|.+++.... .....
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~ 161 (332)
T 3qd2_B 83 EEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRC-SLEDR 161 (332)
T ss_dssp HHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCC-SGGGS
T ss_pred hhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhccc-Cccch
Confidence 3899999999999999997643 23456
Q ss_pred CHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCCCc----------ccccCccc
Q 004994 540 SWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTN----------ELSEGLLT 609 (720)
Q Consensus 540 ~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~----------~~~~~~~~ 609 (720)
.+..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++........ .......+
T Consensus 162 ~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~g 238 (332)
T 3qd2_B 162 EHGVCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVG 238 (332)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-
T ss_pred hhHHHHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCC
Confidence 7778899999999999999987 9999999999999999999999999999877543211 12234568
Q ss_pred cccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcCCCCCchhhHHHH
Q 004994 610 AHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDGAYLAKSL 688 (720)
Q Consensus 610 ~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 688 (720)
+..|+|||.+ ...++.++|||||||++|||++|..|+... . ............ .......
T Consensus 239 t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~-----~-------------~~~~~~~~~~~~-~~~~~~~ 299 (332)
T 3qd2_B 239 TKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMER-----V-------------RIITDVRNLKFP-LLFTQKY 299 (332)
T ss_dssp CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHH-----H-------------HHHHHHHTTCCC-HHHHHHC
T ss_pred CcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHH-----H-------------HHHHHhhccCCC-cccccCC
Confidence 9999999998 567999999999999999999987765210 0 011111111111 1223444
Q ss_pred HHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 689 SRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 689 ~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
+++.+++.+||+.||++|||++|++++
T Consensus 300 ~~~~~li~~~l~~~p~~Rps~~~~l~~ 326 (332)
T 3qd2_B 300 PQEHMMVQDMLSPSPTERPEATDIIEN 326 (332)
T ss_dssp HHHHHHHHHHHCSSGGGSCCHHHHHHS
T ss_pred hhHHHHHHHHccCCCCcCCCHHHHhhc
Confidence 677899999999999999999999975
No 79
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=7.8e-41 Score=344.15 Aligned_cols=253 Identities=21% Similarity=0.295 Sum_probs=202.1
Q ss_pred cCCCCCCeeccCCCceEEEEEeCCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccC--CeEEEEE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEH--GQHLLVY 517 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~--~~~~lv~ 517 (720)
++|...+.||+|+||+||+|... ++.||||++..........+.|.+|++++++++||||+++++++.+. +..++||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (271)
T 3kmu_A 10 KQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLIT 88 (271)
T ss_dssp GGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEE
T ss_pred HHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeee
Confidence 46778899999999999999874 88999999986554455567899999999999999999999999876 7889999
Q ss_pred eeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCC
Q 004994 518 DYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFS 597 (720)
Q Consensus 518 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~ 597 (720)
||+++|+|.+++.... ...+++..+..++.++++||+|||+. .++|+||||||+|||++.++.++|+|||++.....
T Consensus 89 e~~~~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~-~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~ 165 (271)
T 3kmu_A 89 HWMPYGSLYNVLHEGT--NFVVDQSQAVKFALDMARGMAFLHTL-EPLIPRHALNSRSVMIDEDMTARISMADVKFSFQS 165 (271)
T ss_dssp ECCTTCBHHHHHHSCS--SCCCCHHHHHHHHHHHHHHHHHHTTS-SSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSC
T ss_pred cccCCCcHHHHHhhcc--cCCCCHHHHHHHHHHHHHHHHHHhcC-CCceecCCCccceEEEcCCcceeEEeccceeeecc
Confidence 9999999999997532 23589999999999999999999986 12399999999999999999999999998754321
Q ss_pred CCCcccccCccccccCCCCccCCC-CC---CCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhh
Q 004994 598 GSTNELSEGLLTAHGSGAPEFESG-SY---SCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSR 673 (720)
Q Consensus 598 ~~~~~~~~~~~~~~~~~aPE~~~~-~~---~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (720)
....++..|+|||.+.+ .+ +.++|||||||++|||+||+.||........... ....
T Consensus 166 -------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~------------~~~~ 226 (271)
T 3kmu_A 166 -------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMK------------VALE 226 (271)
T ss_dssp -------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHH------------HHHS
T ss_pred -------cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHH------------HHhc
Confidence 22457889999999843 33 3489999999999999999999975432111000 0000
Q ss_pred hcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 674 MVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 674 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
...+.. +...+.++.+++.+||+.||++|||++|+++.|+++
T Consensus 227 ~~~~~~----~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l 268 (271)
T 3kmu_A 227 GLRPTI----PPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKM 268 (271)
T ss_dssp CCCCCC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCCCC----CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHh
Confidence 011111 122345788999999999999999999999999986
No 80
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=4e-41 Score=355.88 Aligned_cols=266 Identities=21% Similarity=0.326 Sum_probs=210.0
Q ss_pred HHHHHhcCCCCCCeeccCCCceEEEEEeC------CCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEe
Q 004994 434 SLQQYTNSFSEGNFIGEGLLGSVYKAELP------GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYC 507 (720)
Q Consensus 434 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~ 507 (720)
+.....++|...+.||+|+||.||+|... +++.||||++.... .......+.+|++++++++||||+++++++
T Consensus 19 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~ 97 (322)
T 1p4o_A 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA-SMRERIEFLNEASVMKEFNCHHVVRLLGVV 97 (322)
T ss_dssp TTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTS-CHHHHHHHHHHHHHGGGCCCTTBCCEEEEE
T ss_pred hhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEeccccc-CHHHHHHHHHHHHHHHhcCCCCEeeeEEEE
Confidence 33445678888999999999999999653 37889999997543 233456789999999999999999999999
Q ss_pred ccCCeEEEEEeeCCCCCHHHHhhccchh------ccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCC
Q 004994 508 NEHGQHLLVYDYGGNCTLHDLLHSDEEA------HKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEK 581 (720)
Q Consensus 508 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~------~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~ 581 (720)
.+.+..++||||+++|+|.+++...... ...+++..+.+++.++++||+|||+. +|+||||||+|||++.+
T Consensus 98 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NIli~~~ 174 (322)
T 1p4o_A 98 SQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAED 174 (322)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEECTT
T ss_pred ccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceEEEcCC
Confidence 9999999999999999999998643211 14568899999999999999999997 99999999999999999
Q ss_pred CCeEEccccCCCCCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhh
Q 004994 582 LIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVR 659 (720)
Q Consensus 582 ~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~ 659 (720)
+.+||+|||+++...............++..|+|||.. .+.++.++|||||||++|||+| |+.||........ ..
T Consensus 175 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~---~~ 251 (322)
T 1p4o_A 175 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQV---LR 251 (322)
T ss_dssp CCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHH---HH
T ss_pred CeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHH---HH
Confidence 99999999999866433222222334567889999998 5678999999999999999999 8999965332111 11
Q ss_pred hcccccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhC
Q 004994 660 WAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCMI 720 (720)
Q Consensus 660 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~ 720 (720)
.+...... ..+...+..+.+++.+||+.||++|||+.|++++|++++
T Consensus 252 -------------~~~~~~~~-~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~ 298 (322)
T 1p4o_A 252 -------------FVMEGGLL-DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEM 298 (322)
T ss_dssp -------------HHHTTCCC-CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGS
T ss_pred -------------HHHcCCcC-CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhh
Confidence 00010000 011123457889999999999999999999999998864
No 81
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=1.6e-40 Score=350.16 Aligned_cols=246 Identities=22% Similarity=0.316 Sum_probs=200.9
Q ss_pred cCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEeccccc-ccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVS-QRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVY 517 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 517 (720)
++|...+.||+|+||+||+|.. .+|+.||+|++.+... .....+.+.+|..+++.++||||+++++++.+.+..++||
T Consensus 6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~ 85 (318)
T 1fot_A 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM 85 (318)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEE
Confidence 5678889999999999999966 4799999999975422 2244567889999999999999999999999999999999
Q ss_pred eeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCC
Q 004994 518 DYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFS 597 (720)
Q Consensus 518 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~ 597 (720)
||+++|+|.+++.. ...+++.....++.+++.||+|||+. +|+||||||+|||++.++++||+|||+++....
T Consensus 86 e~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~ 158 (318)
T 1fot_A 86 DYIEGGELFSLLRK----SQRFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVPD 158 (318)
T ss_dssp CCCCSCBHHHHHHH----TSSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCEECSS
T ss_pred eCCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeecCcceecCC
Confidence 99999999999853 34688999999999999999999987 999999999999999999999999999987532
Q ss_pred CCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcC
Q 004994 598 GSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVD 676 (720)
Q Consensus 598 ~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (720)
. .....+|+.|+|||.+ ...++.++|||||||++|||++|+.||......... ..+..
T Consensus 159 ~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~----------------~~i~~ 217 (318)
T 1fot_A 159 V-----TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTY----------------EKILN 217 (318)
T ss_dssp C-----BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHH----------------HHHHH
T ss_pred c-----cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHH----------------HHHHh
Confidence 2 2235689999999998 456899999999999999999999999754321111 11111
Q ss_pred CCCCchhhHHHHHHHHHHHHHHhccCCCCCC-----CHHHHHHH
Q 004994 677 PSLDGAYLAKSLSRFADIISRCVQWEPGFRP-----PMSEIVQD 715 (720)
Q Consensus 677 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~evl~~ 715 (720)
.... ++...+.++.+++.+||+.||++|| +++|+++|
T Consensus 218 ~~~~--~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~h 259 (318)
T 1fot_A 218 AELR--FPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH 259 (318)
T ss_dssp CCCC--CCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred CCCC--CCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcC
Confidence 0000 1112235788999999999999999 89998864
No 82
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=1.4e-40 Score=367.95 Aligned_cols=249 Identities=26% Similarity=0.394 Sum_probs=200.8
Q ss_pred hcCCCCCCeeccCCCceEEEEEeCCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCC-eEEEEE
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHG-QHLLVY 517 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~-~~~lv~ 517 (720)
.++|...+.||+|+||+||+|... |+.||||+++... ..+.|.+|++++++++|||||++++++.+.+ ..++||
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~ 266 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 266 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT----TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEE
T ss_pred hHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch----HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEE
Confidence 356777899999999999999875 7899999997542 3468999999999999999999999987654 799999
Q ss_pred eeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCC
Q 004994 518 DYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFS 597 (720)
Q Consensus 518 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~ 597 (720)
||+++|+|.+++... ....+++..+..++.++++||+|||+. +||||||||+|||++.++.+||+|||+++....
T Consensus 267 e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 341 (450)
T 1k9a_A 267 EYMAKGSLVDYLRSR--GRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS 341 (450)
T ss_dssp ECCTTCBHHHHHHHH--CTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTCEECC-
T ss_pred EecCCCcHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCcccccc
Confidence 999999999999642 223478899999999999999999997 999999999999999999999999999985432
Q ss_pred CCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcccccCchhhhhhhc
Q 004994 598 GSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMV 675 (720)
Q Consensus 598 ~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (720)
.. ....++..|+|||.+ .+.++.++|||||||++|||+| |+.||...........+ ..-.
T Consensus 342 ~~-----~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i-------------~~~~ 403 (450)
T 1k9a_A 342 TQ-----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRV-------------EKGY 403 (450)
T ss_dssp ----------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHH-------------HTTC
T ss_pred cc-----cCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH-------------HcCC
Confidence 11 112456789999998 6679999999999999999998 99999754332211111 0000
Q ss_pred CCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 676 DPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 676 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
.. ..+..++.++.+++.+||+.||++|||+.|+++.|+++
T Consensus 404 ~~----~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i 443 (450)
T 1k9a_A 404 KM----DAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHI 443 (450)
T ss_dssp CC----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CC----CCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 00 11223446788999999999999999999999999876
No 83
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=9.2e-41 Score=369.58 Aligned_cols=255 Identities=27% Similarity=0.406 Sum_probs=200.8
Q ss_pred hcCCCCCCeeccCCCceEEEEEeCCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEe
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYD 518 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 518 (720)
.++|...+.||+|+||+||+|...++..||||+++... ...++|.+|++++++++||||+++++++.+ +..++|||
T Consensus 183 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e 258 (452)
T 1fmk_A 183 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT---MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTE 258 (452)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS---SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEC
T ss_pred hhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC---CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEeh
Confidence 34577788999999999999998888889999997542 345789999999999999999999999976 67899999
Q ss_pred eCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCC
Q 004994 519 YGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSG 598 (720)
Q Consensus 519 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~ 598 (720)
|+++|+|.+++... ....+++..+..++.|+++||+|||+. +||||||||+|||++.++.+||+|||+++.....
T Consensus 259 ~~~~gsL~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 333 (452)
T 1fmk_A 259 YMSKGSLLDFLKGE--TGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDN 333 (452)
T ss_dssp CCTTCBHHHHHSHH--HHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC-----
T ss_pred hhcCCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCccceecCCC
Confidence 99999999999632 234588999999999999999999997 9999999999999999999999999999876432
Q ss_pred CCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcccccCchhhhhhhcC
Q 004994 599 STNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVD 676 (720)
Q Consensus 599 ~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (720)
.. .......++..|+|||.+ .+.++.++|||||||++|||+| |+.||...........+ ..-..
T Consensus 334 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i-------------~~~~~ 399 (452)
T 1fmk_A 334 EY-TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV-------------ERGYR 399 (452)
T ss_dssp ----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHH-------------HTTCC
T ss_pred ce-ecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHH-------------HcCCC
Confidence 21 122234456789999988 5789999999999999999999 99999754321111000 00000
Q ss_pred CCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhC
Q 004994 677 PSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCMI 720 (720)
Q Consensus 677 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~ 720 (720)
. ..+..+++.+.+++.+||+.||++|||++++++.|++++
T Consensus 400 ~----~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~ 439 (452)
T 1fmk_A 400 M----PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 439 (452)
T ss_dssp C----CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTT
T ss_pred C----CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHh
Confidence 0 111233467889999999999999999999999999863
No 84
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=8.8e-41 Score=351.84 Aligned_cols=263 Identities=24% Similarity=0.349 Sum_probs=197.0
Q ss_pred HhcCCCCCCeeccCCCceEEEEEeC----CCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCC--
Q 004994 438 YTNSFSEGNFIGEGLLGSVYKAELP----GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHG-- 511 (720)
Q Consensus 438 ~~~~~~~~~~lg~G~~g~Vy~~~~~----~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~-- 511 (720)
..++|...+.||+|+||.||+|... ++..||||++..........+.+.+|++++++++||||+++++++.+.+
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 111 (313)
T 3brb_A 32 DRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQ 111 (313)
T ss_dssp CGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC----
T ss_pred CHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeecccc
Confidence 3467788899999999999999653 3558999999765444455678999999999999999999999997654
Q ss_pred ---eEEEEEeeCCCCCHHHHhhccc--hhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEE
Q 004994 512 ---QHLLVYDYGGNCTLHDLLHSDE--EAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRV 586 (720)
Q Consensus 512 ---~~~lv~e~~~~gsL~~~l~~~~--~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl 586 (720)
..++||||+++|+|.+++.... .....+++..+..++.++++||.|||+. +|+||||||+|||++.++.+||
T Consensus 112 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kl 188 (313)
T 3brb_A 112 GIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMTVCV 188 (313)
T ss_dssp ---CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTTSCEEE
T ss_pred CCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEE
Confidence 3599999999999999985322 2345689999999999999999999987 9999999999999999999999
Q ss_pred ccccCCCCCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcccc
Q 004994 587 SDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPR 664 (720)
Q Consensus 587 ~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~ 664 (720)
+|||+++...............++..|+|||.. ...++.++||||||+++|||+| |+.||............
T Consensus 189 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~------ 262 (313)
T 3brb_A 189 ADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYL------ 262 (313)
T ss_dssp CSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHH------
T ss_pred eecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHH------
Confidence 999999876543322223334567789999998 6678999999999999999999 99999754322111000
Q ss_pred cCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhC
Q 004994 665 LHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCMI 720 (720)
Q Consensus 665 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~ 720 (720)
.....+. .+...+.++.+++.+||+.||++|||+.+++++|++++
T Consensus 263 -------~~~~~~~----~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~ 307 (313)
T 3brb_A 263 -------LHGHRLK----QPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLL 307 (313)
T ss_dssp -------HTTCCCC----CBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -------HcCCCCC----CCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 0000001 11223467889999999999999999999999999863
No 85
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=1.3e-40 Score=351.12 Aligned_cols=270 Identities=19% Similarity=0.296 Sum_probs=188.7
Q ss_pred hcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEE
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVY 517 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 517 (720)
.++|...+.||+|+||+||+|.. .+|+.||||++.... .....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 82 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDS-EEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVF 82 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCS-TTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeeccc-ccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEE
Confidence 35788899999999999999965 468999999997543 2334467889999999999999999999999999999999
Q ss_pred eeCCCCCHHHHhhccch--hccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCC
Q 004994 518 DYGGNCTLHDLLHSDEE--AHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLL 595 (720)
Q Consensus 518 e~~~~gsL~~~l~~~~~--~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~ 595 (720)
||++ |+|.+++..... ....+++..+..++.|+++||.|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 83 e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~ 158 (317)
T 2pmi_A 83 EFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAF 158 (317)
T ss_dssp ECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCSSCEET
T ss_pred EecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcCccceec
Confidence 9999 599998854321 124588999999999999999999997 9999999999999999999999999999876
Q ss_pred CCCCCcccccCccccccCCCCccCC--CCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchh-hhcc-cccCchhhh
Q 004994 596 FSGSTNELSEGLLTAHGSGAPEFES--GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLV-RWAI-PRLHDIDAL 671 (720)
Q Consensus 596 ~~~~~~~~~~~~~~~~~~~aPE~~~--~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~-~~~~-~~~~~~~~~ 671 (720)
.... .......++..|+|||.+. ..++.++|||||||++|||+||+.||...........+ .... +.-..+...
T Consensus 159 ~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 236 (317)
T 2pmi_A 159 GIPV--NTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSV 236 (317)
T ss_dssp TSCC--CCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGG
T ss_pred CCCc--ccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhh
Confidence 4321 1223346789999999884 35899999999999999999999999764432211111 0000 000000000
Q ss_pred hhh--cCCCC----C--------chhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 672 SRM--VDPSL----D--------GAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 672 ~~~--~~~~~----~--------~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
... ..+.. . .......+.++.+++.+||+.||++|||++|++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h 294 (317)
T 2pmi_A 237 TKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHH 294 (317)
T ss_dssp GGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred hhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCC
Confidence 000 00000 0 00001223578899999999999999999999864
No 86
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=1.8e-40 Score=358.89 Aligned_cols=257 Identities=18% Similarity=0.264 Sum_probs=198.1
Q ss_pred cCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccc-cccHHHHHHHHHHHHcc-CCCceeEEEeEeccCCeEEEE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQ-RQTDEEFLELASTISRL-RHGNIVELIGYCNEHGQHLLV 516 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~-~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv 516 (720)
++|...++||+|+||+||+|+. .+++.||||++++.... ....+.+..|..++.++ +|||||++++++.+.+..++|
T Consensus 52 ~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV 131 (396)
T 4dc2_A 52 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 131 (396)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred hHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEE
Confidence 5688889999999999999976 46889999999764322 22334577888998887 899999999999999999999
Q ss_pred EeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCC
Q 004994 517 YDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLF 596 (720)
Q Consensus 517 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~ 596 (720)
|||+++|+|.+++.. ...+++.....++.+++.||+|||+. +||||||||+|||++.++++||+|||+|+...
T Consensus 132 ~E~~~gg~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFGla~~~~ 204 (396)
T 4dc2_A 132 IEYVNGGDLMFHMQR----QRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL 204 (396)
T ss_dssp EECCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCC
T ss_pred EEcCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEeecceeeecc
Confidence 999999999998853 35689999999999999999999997 99999999999999999999999999998632
Q ss_pred CCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchh-hhhhh
Q 004994 597 SGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDID-ALSRM 674 (720)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 674 (720)
.. ........||+.|+|||.+ ...++.++|||||||++|||++|+.||........... ...+ ....+
T Consensus 205 ~~--~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~--------~~~~~~~~~i 274 (396)
T 4dc2_A 205 RP--GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQ--------NTEDYLFQVI 274 (396)
T ss_dssp CT--TCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC--------------CCHHHHHHHH
T ss_pred cC--CCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccch--------hhHHHHHHHH
Confidence 22 1233456789999999998 45789999999999999999999999964322111000 0000 00111
Q ss_pred cCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCH------HHHHHH
Q 004994 675 VDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPM------SEIVQD 715 (720)
Q Consensus 675 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~------~evl~~ 715 (720)
..... ..+...+.++.+++.+||+.||++||++ +|+++|
T Consensus 275 ~~~~~--~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~H 319 (396)
T 4dc2_A 275 LEKQI--RIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 319 (396)
T ss_dssp HHCCC--CCCTTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHS
T ss_pred hcccc--CCCCcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcC
Confidence 11110 0112234578899999999999999985 677654
No 87
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=1.5e-40 Score=352.90 Aligned_cols=259 Identities=14% Similarity=0.128 Sum_probs=204.0
Q ss_pred hcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHcc-CCCceeEEEeEeccCCeEEEE
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRL-RHGNIVELIGYCNEHGQHLLV 516 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv 516 (720)
.++|...+.||+|+||+||+|.. .+|+.||||++..... .+.+.+|+++++++ +||||+++++++.+.+..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv 83 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR----APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMV 83 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS----SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEE
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc----hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEE
Confidence 45788889999999999999965 6799999999864322 23578999999999 999999999999999999999
Q ss_pred EeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCC-----eEEccccC
Q 004994 517 YDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLI-----VRVSDCGL 591 (720)
Q Consensus 517 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~-----~kl~DFGl 591 (720)
|||+ +++|.+++... ...+++..+..++.++++||+|||+. +|+||||||+|||++.++. +||+|||+
T Consensus 84 ~e~~-~~~L~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~ 156 (330)
T 2izr_A 84 LELL-GPSLEDLFDLC---DRTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHIIDFAL 156 (330)
T ss_dssp EECC-CCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEECCCTT
T ss_pred EEeC-CCCHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEEEccc
Confidence 9999 89999998642 35789999999999999999999997 9999999999999998887 99999999
Q ss_pred CCCCCCCCCcc-----cccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhccccc
Q 004994 592 APLLFSGSTNE-----LSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRL 665 (720)
Q Consensus 592 a~~~~~~~~~~-----~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~ 665 (720)
++.+....... ......||..|+|||.. ...++.++|||||||++|||++|+.||...............
T Consensus 157 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i---- 232 (330)
T 2izr_A 157 AKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKI---- 232 (330)
T ss_dssp CEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHH----
T ss_pred ceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHH----
Confidence 98764432211 12346789999999998 556899999999999999999999999764332211111100
Q ss_pred CchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 666 HDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 666 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
. ....... ........+ ++.+++.+||+.||.+||++++|++.|+++
T Consensus 233 ~---~~~~~~~---~~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~ 279 (330)
T 2izr_A 233 G---DTKRATP---IEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDL 279 (330)
T ss_dssp H---HHHHHSC---HHHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHH
T ss_pred H---hhhccCC---HHHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHH
Confidence 0 0000000 000011123 789999999999999999999999999875
No 88
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=6e-41 Score=353.38 Aligned_cols=268 Identities=23% Similarity=0.371 Sum_probs=210.4
Q ss_pred HHHHHHhcCCCCCCeeccCCCceEEEEEe------CCCcEEEEEEecccccccccHHHHHHHHHHHHcc-CCCceeEEEe
Q 004994 433 ASLQQYTNSFSEGNFIGEGLLGSVYKAEL------PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRL-RHGNIVELIG 505 (720)
Q Consensus 433 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~------~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~ 505 (720)
.......++|...+.||+|+||+||+|.. .+++.||||++..... ....+.+.+|+++++++ +||||+++++
T Consensus 20 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~hp~iv~~~~ 98 (316)
T 2xir_A 20 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT-HSEHRALMSELKILIHIGHHLNVVNLLG 98 (316)
T ss_dssp HHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCC-HHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred cceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCC-cHHHHHHHHHHHHHHhcccCCCeeeEEE
Confidence 33444567888999999999999999963 3568999999975432 33456789999999999 7999999999
Q ss_pred EeccCC-eEEEEEeeCCCCCHHHHhhccchh------------ccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCC
Q 004994 506 YCNEHG-QHLLVYDYGGNCTLHDLLHSDEEA------------HKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFK 572 (720)
Q Consensus 506 ~~~~~~-~~~lv~e~~~~gsL~~~l~~~~~~------------~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlk 572 (720)
++...+ ..++||||+++|+|.+++...... ...+++..+..++.++++||.|||+. +|+|||||
T Consensus 99 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dik 175 (316)
T 2xir_A 99 ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLA 175 (316)
T ss_dssp EECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCCCSCCS
T ss_pred EEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---CcccccCc
Confidence 987654 589999999999999999754321 12378999999999999999999997 99999999
Q ss_pred CCCeEEcCCCCeEEccccCCCCCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCC
Q 004994 573 SSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSR 650 (720)
Q Consensus 573 p~NiLl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~ 650 (720)
|+||+++.++.+||+|||+++...............++..|+|||.. ...++.++|||||||++|||+| |+.||....
T Consensus 176 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~ 255 (316)
T 2xir_A 176 ARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK 255 (316)
T ss_dssp GGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred cceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccc
Confidence 99999999999999999999877544333334445678899999988 6678999999999999999998 999997543
Q ss_pred CccccchhhhcccccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhC
Q 004994 651 PRGEQSLVRWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCMI 720 (720)
Q Consensus 651 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~ 720 (720)
..... .. .+........ +...+.++.+++.+||+.||++|||++|++++|++++
T Consensus 256 ~~~~~--~~----------~~~~~~~~~~----~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 309 (316)
T 2xir_A 256 IDEEF--CR----------RLKEGTRMRA----PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 309 (316)
T ss_dssp CSHHH--HH----------HHHHTCCCCC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred hhHHH--HH----------HhccCccCCC----CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 22110 00 0000000111 1112357889999999999999999999999999863
No 89
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=2.8e-40 Score=347.43 Aligned_cols=261 Identities=17% Similarity=0.284 Sum_probs=196.5
Q ss_pred cCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEeccc-ccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNT-VSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVY 517 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~-~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 517 (720)
++|...+.||+|+||.||+|.. .+|+.||||++... .......+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 32 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 111 (310)
T 2wqm_A 32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 111 (310)
T ss_dssp GGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEE
Confidence 4688889999999999999965 57999999999743 223345578899999999999999999999999999999999
Q ss_pred eeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCC
Q 004994 518 DYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFS 597 (720)
Q Consensus 518 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~ 597 (720)
||+++++|.+++.........+++..+..++.++++||.|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 112 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~ 188 (310)
T 2wqm_A 112 ELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 188 (310)
T ss_dssp ECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC--------
T ss_pred ecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEeccceeeecC
Confidence 99999999999875444456789999999999999999999997 999999999999999999999999999987643
Q ss_pred CCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcC
Q 004994 598 GSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVD 676 (720)
Q Consensus 598 ~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (720)
.. .......++..|+|||.. ...++.++||||||+++|||++|+.||....... ..... .+..
T Consensus 189 ~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-~~~~~-------------~~~~ 252 (310)
T 2wqm_A 189 KT--TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNL-YSLCK-------------KIEQ 252 (310)
T ss_dssp ------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCH-HHHHH-------------HHHT
T ss_pred CC--ccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhH-HHHHH-------------Hhhc
Confidence 22 122235678899999988 5578999999999999999999999996432111 00110 0000
Q ss_pred CCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 677 PSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 677 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
...........+.++.+++.+||+.||++|||++||++.|++|
T Consensus 253 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l 295 (310)
T 2wqm_A 253 CDYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRM 295 (310)
T ss_dssp TCSCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ccCCCCcccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence 0000000112335788999999999999999999999999876
No 90
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=6.8e-41 Score=355.90 Aligned_cols=261 Identities=24% Similarity=0.348 Sum_probs=207.3
Q ss_pred hcCCCCCCeeccCCCceEEEEEeC-CC-----cEEEEEEecccccccccHHHHHHHHHHHHcc-CCCceeEEEeEeccCC
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAELP-GG-----KLLAVKKLSNTVSQRQTDEEFLELASTISRL-RHGNIVELIGYCNEHG 511 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g-----~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~ 511 (720)
.++|...+.||+|+||+||+|... ++ ..||+|.+.... .....+.+.+|+++++++ +||||+++++++.+.+
T Consensus 45 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 123 (333)
T 2i1m_A 45 RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTA-HADEKEALMSELKIMSHLGQHENIVNLLGACTHGG 123 (333)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred HHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhccccc-ChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCC
Confidence 457788899999999999999753 23 489999997543 233457789999999999 8999999999999999
Q ss_pred eEEEEEeeCCCCCHHHHhhccchh----------ccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCC
Q 004994 512 QHLLVYDYGGNCTLHDLLHSDEEA----------HKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEK 581 (720)
Q Consensus 512 ~~~lv~e~~~~gsL~~~l~~~~~~----------~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~ 581 (720)
..++||||+++|+|.+++...... ...+++..+..++.+++.||+|||+. +|+||||||+|||++.+
T Consensus 124 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~ 200 (333)
T 2i1m_A 124 PVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNG 200 (333)
T ss_dssp SCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGCEEEGG
T ss_pred ceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccceEEECCC
Confidence 999999999999999998643211 24578999999999999999999997 99999999999999999
Q ss_pred CCeEEccccCCCCCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhh
Q 004994 582 LIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVR 659 (720)
Q Consensus 582 ~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~ 659 (720)
+.+||+|||+++...............++..|+|||.. ...++.++|||||||++|||+| |+.||......... ..
T Consensus 201 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~--~~ 278 (333)
T 2i1m_A 201 HVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKF--YK 278 (333)
T ss_dssp GEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHH--HH
T ss_pred CeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHHH--HH
Confidence 99999999999876544333333445667889999987 5679999999999999999999 99999754322110 00
Q ss_pred hcccccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 660 WAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 660 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
.......... +...+..+.+++.+||+.||.+|||++|++++|+++
T Consensus 279 ----------~~~~~~~~~~----~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~ 324 (333)
T 2i1m_A 279 ----------LVKDGYQMAQ----PAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQ 324 (333)
T ss_dssp ----------HHHHTCCCCC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ----------HHhcCCCCCC----CCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHH
Confidence 0000001111 111235788999999999999999999999999875
No 91
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=1.3e-40 Score=344.82 Aligned_cols=256 Identities=23% Similarity=0.334 Sum_probs=193.0
Q ss_pred hcCCCCCCeeccCCCceEEEEEeC----CCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEE
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAELP----GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHL 514 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~~----~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~ 514 (720)
.++|...+.||+|+||.||+|... .+..||+|++.... .....+.+.+|+.++++++||||+++++++.+ +..+
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~ 91 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCT-SDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVW 91 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTT-SHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS-SSCE
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCccceEEEEEcc-CccE
Confidence 457788899999999999999653 25679999987542 23445789999999999999999999999854 5689
Q ss_pred EEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCC
Q 004994 515 LVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPL 594 (720)
Q Consensus 515 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~ 594 (720)
+||||+++++|.+++... ...+++..+..++.++++||.|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 92 lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 165 (281)
T 1mp8_A 92 IIMELCTLGELRSFLQVR---KYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRY 165 (281)
T ss_dssp EEEECCTTEEHHHHHHHT---TTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC------
T ss_pred EEEecCCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECccccccc
Confidence 999999999999998632 34688999999999999999999997 999999999999999999999999999987
Q ss_pred CCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcccccCchhhhh
Q 004994 595 LFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALS 672 (720)
Q Consensus 595 ~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (720)
....... ......++..|+|||.. ...++.++|||||||++|||++ |+.||...........+.
T Consensus 166 ~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i~------------- 231 (281)
T 1mp8_A 166 MEDSTYY-KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE------------- 231 (281)
T ss_dssp --------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHH-------------
T ss_pred cCccccc-ccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHHH-------------
Confidence 6433211 12223456789999988 5678999999999999999997 999997543221111000
Q ss_pred hhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhC
Q 004994 673 RMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCMI 720 (720)
Q Consensus 673 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~ 720 (720)
...... .+...+.++.+++.+||+.||++|||+.|++++|++++
T Consensus 232 ~~~~~~----~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 275 (281)
T 1mp8_A 232 NGERLP----MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL 275 (281)
T ss_dssp TTCCCC----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred cCCCCC----CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 000000 11223467889999999999999999999999999863
No 92
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=2e-40 Score=355.99 Aligned_cols=252 Identities=20% Similarity=0.253 Sum_probs=190.2
Q ss_pred hcCCCCCCeeccCCCceEEEEEeC-CCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEE
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVY 517 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 517 (720)
.++|...+.||+|+||+||++... +++.||||++.... ...+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 95 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGA---AIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIM 95 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESST---TSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCc---cccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEE
Confidence 357888899999999999999664 79999999997542 23357889999999999999999999999999999999
Q ss_pred eeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCC--eEEccccCCCCC
Q 004994 518 DYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLI--VRVSDCGLAPLL 595 (720)
Q Consensus 518 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~--~kl~DFGla~~~ 595 (720)
||+++|+|.+++.. ...+++..+..++.++++||+|||+. +|+||||||+|||++.++. +||+|||+++..
T Consensus 96 e~~~~~~L~~~l~~----~~~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~ 168 (361)
T 3uc3_A 96 EYASGGELYERICN----AGRFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSKSS 168 (361)
T ss_dssp ECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCCCC---
T ss_pred EeCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecCccccc
Confidence 99999999998853 34689999999999999999999987 9999999999999987765 999999999754
Q ss_pred CCCCCcccccCccccccCCCCccC-CCCCCCc-cchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhh
Q 004994 596 FSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQ-SDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSR 673 (720)
Q Consensus 596 ~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~-~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (720)
... .......+++.|+|||.+ ...++.+ +|||||||++|||++|+.||.......... ..+..
T Consensus 169 ~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~------------~~~~~ 233 (361)
T 3uc3_A 169 VLH---SQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYR------------KTIQR 233 (361)
T ss_dssp ---------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHH------------HHHHH
T ss_pred ccc---CCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHH------------HHHHH
Confidence 222 122335689999999988 4556555 899999999999999999997543221110 01111
Q ss_pred hcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 674 MVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 674 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
+.............+.++.+|+.+||+.||++|||++|+++|
T Consensus 234 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 234 ILSVKYSIPDDIRISPECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp HHTTCCCCCTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HhcCCCCCCCcCCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 111111000011123578899999999999999999999976
No 93
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=2.9e-40 Score=345.14 Aligned_cols=260 Identities=17% Similarity=0.150 Sum_probs=204.9
Q ss_pred hcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHcc-CCCceeEEEeEeccCCeEEEE
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRL-RHGNIVELIGYCNEHGQHLLV 516 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv 516 (720)
.++|...+.||+|+||+||+|.. .+|+.||||++.... ..+.+.+|+++++++ +|+|++++++++.+....++|
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 84 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS----DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLV 84 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT----TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC----ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEE
Confidence 45788899999999999999964 679999999986432 223577899999999 899999999999999999999
Q ss_pred EeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCC-----eEEccccC
Q 004994 517 YDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLI-----VRVSDCGL 591 (720)
Q Consensus 517 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~-----~kl~DFGl 591 (720)
|||+ +++|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+|||++.++. +||+|||+
T Consensus 85 ~e~~-~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~ 157 (298)
T 1csn_A 85 IDLL-GPSLEDLLDLC---GRKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGM 157 (298)
T ss_dssp EECC-CCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCTT
T ss_pred EEec-CCCHHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEEEECcc
Confidence 9999 89999999632 34589999999999999999999987 9999999999999987776 99999999
Q ss_pred CCCCCCCCCc-----ccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhccccc
Q 004994 592 APLLFSGSTN-----ELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRL 665 (720)
Q Consensus 592 a~~~~~~~~~-----~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~ 665 (720)
++........ .......++..|+|||.. ...++.++|||||||++|||++|+.||................
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~--- 234 (298)
T 1csn_A 158 VKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIG--- 234 (298)
T ss_dssp CEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHH---
T ss_pred ccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHH---
Confidence 9876543221 123345688999999998 4568999999999999999999999997643322111111000
Q ss_pred CchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 666 HDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 666 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
.. ... ..........++++.+++.+||+.||++|||+++|++.|+++
T Consensus 235 -~~-----~~~-~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~ 281 (298)
T 1csn_A 235 -EK-----KQS-TPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKV 281 (298)
T ss_dssp -HH-----HHH-SCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHH
T ss_pred -hh-----ccC-ccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHH
Confidence 00 000 000001112346789999999999999999999999999886
No 94
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=1e-40 Score=355.10 Aligned_cols=249 Identities=22% Similarity=0.291 Sum_probs=200.4
Q ss_pred hcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEeccccc-ccccHHHHHHHHHHHHcc-CCCceeEEEeEeccCCeEEE
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVS-QRQTDEEFLELASTISRL-RHGNIVELIGYCNEHGQHLL 515 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~l 515 (720)
.++|...+.||+|+||+||+|+. .+|+.||||++++... .....+.+..|.+++..+ +||||+++++++.+.+..++
T Consensus 16 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~l 95 (345)
T 1xjd_A 16 IEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFF 95 (345)
T ss_dssp CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEE
Confidence 46788899999999999999976 4689999999975421 233456778889999877 99999999999999999999
Q ss_pred EEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCC
Q 004994 516 VYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLL 595 (720)
Q Consensus 516 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~ 595 (720)
||||+++|+|.+++.. ...+++.....++.+++.||+|||+. +||||||||+|||++.++++||+|||+++..
T Consensus 96 v~E~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~ 168 (345)
T 1xjd_A 96 VMEYLNGGDLMYHIQS----CHKFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKEN 168 (345)
T ss_dssp EEECCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred EEeCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEEeEChhhhhc
Confidence 9999999999999853 35688999999999999999999997 9999999999999999999999999999865
Q ss_pred CCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhh
Q 004994 596 FSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRM 674 (720)
Q Consensus 596 ~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (720)
.... .......||+.|+|||.+ ...++.++|||||||++|||++|+.||...........+..
T Consensus 169 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~-------------- 232 (345)
T 1xjd_A 169 MLGD--AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRM-------------- 232 (345)
T ss_dssp CCTT--CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH--------------
T ss_pred ccCC--CcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHh--------------
Confidence 3222 123346789999999998 45689999999999999999999999975432111111100
Q ss_pred cCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHH-HHHH
Q 004994 675 VDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMS-EIVQ 714 (720)
Q Consensus 675 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~-evl~ 714 (720)
..+.. +...+.++.+++.+||+.||++||++. |+++
T Consensus 233 ~~~~~----p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~~ 269 (345)
T 1xjd_A 233 DNPFY----PRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQ 269 (345)
T ss_dssp CCCCC----CTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGG
T ss_pred CCCCC----CcccCHHHHHHHHHHhcCCHhHcCCChHHHHc
Confidence 01111 112235788999999999999999997 6654
No 95
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=4.3e-40 Score=342.63 Aligned_cols=251 Identities=23% Similarity=0.337 Sum_probs=199.8
Q ss_pred CCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEecc----CCeEEE
Q 004994 441 SFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNE----HGQHLL 515 (720)
Q Consensus 441 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~----~~~~~l 515 (720)
.|...+.||+|+||+||+|.. .++..||+|++..........+.+.+|++++++++||||+++++++.. ....++
T Consensus 27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 106 (290)
T 1t4h_A 27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 106 (290)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEE
T ss_pred eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEE
Confidence 355667899999999999965 568899999997655455566789999999999999999999998864 456899
Q ss_pred EEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEc-CCCCeEEccccCCCC
Q 004994 516 VYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLD-EKLIVRVSDCGLAPL 594 (720)
Q Consensus 516 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~-~~~~~kl~DFGla~~ 594 (720)
||||+++++|.+++.. ...+++..+..++.+++.||.|||+. .++|+||||||+|||++ +++.+||+|||++..
T Consensus 107 v~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~-~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~ 181 (290)
T 1t4h_A 107 VTELMTSGTLKTYLKR----FKVMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL 181 (290)
T ss_dssp EEECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCSCCCGGGEEESSTTSCEEECCTTGGGG
T ss_pred EEEecCCCCHHHHHHH----ccCCCHHHHHHHHHHHHHHHHHHHcC-CCCEEECCCCHHHEEEECCCCCEEEeeCCCccc
Confidence 9999999999999953 35688999999999999999999987 12399999999999998 789999999999975
Q ss_pred CCCCCCcccccCccccccCCCCccCCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhh
Q 004994 595 LFSGSTNELSEGLLTAHGSGAPEFESGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRM 674 (720)
Q Consensus 595 ~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (720)
.... ......++..|+|||...+.++.++|||||||++|||++|+.||........ .. ..+
T Consensus 182 ~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~--~~-------------~~~ 242 (290)
T 1t4h_A 182 KRAS----FAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQ--IY-------------RRV 242 (290)
T ss_dssp CCTT----SBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHH--HH-------------HHH
T ss_pred cccc----ccccccCCcCcCCHHHHhccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHH--HH-------------HHH
Confidence 5322 2223467899999999988899999999999999999999999965332111 01 111
Q ss_pred cCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 675 VDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 675 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.............++++.+++.+||+.||++|||++|++++
T Consensus 243 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 283 (290)
T 1t4h_A 243 TSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp TTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hccCCccccCCCCCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 11111111222233578899999999999999999999875
No 96
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=2e-40 Score=340.54 Aligned_cols=253 Identities=25% Similarity=0.398 Sum_probs=205.0
Q ss_pred cCCCCCCeeccCCCceEEEEEeCCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEee
Q 004994 440 NSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDY 519 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 519 (720)
++|...+.||+|+||.||+|...+++.||+|++.... ...+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA---MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEF 84 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTT---BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECC
T ss_pred hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccC---CCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeC
Confidence 4677788999999999999988888999999997543 3346899999999999999999999999999999999999
Q ss_pred CCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCC
Q 004994 520 GGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGS 599 (720)
Q Consensus 520 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~ 599 (720)
+++++|.+++... ...+++..+..++.++++||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 85 ~~~~~L~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~ 158 (267)
T 3t9t_A 85 MEHGCLSDYLRTQ---RGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ 158 (267)
T ss_dssp CTTCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHH
T ss_pred CCCCcHHHHHhhC---cccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEccccccccccccc
Confidence 9999999998532 34688999999999999999999997 89999999999999999999999999998653221
Q ss_pred CcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcccccCchhhhhhhcCC
Q 004994 600 TNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDP 677 (720)
Q Consensus 600 ~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (720)
........++..|+|||.. ...++.++||||||+++|||++ |+.||........ ... +..-...
T Consensus 159 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~---~~~----------i~~~~~~ 224 (267)
T 3t9t_A 159 -YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV---VED----------ISTGFRL 224 (267)
T ss_dssp -HHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH---HHH----------HHTTCCC
T ss_pred -ccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHH---HHH----------HhcCCcC
Confidence 1112234456789999998 5678999999999999999999 8999975432111 100 0000000
Q ss_pred CCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 678 SLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 678 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
.. +...+..+.+++.+||+.||++|||++|++++|+++
T Consensus 225 ~~----~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l 262 (267)
T 3t9t_A 225 YK----PRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEI 262 (267)
T ss_dssp CC----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CC----CccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 00 111235688999999999999999999999999986
No 97
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.9e-40 Score=348.82 Aligned_cols=267 Identities=21% Similarity=0.347 Sum_probs=200.1
Q ss_pred cCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEe
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYD 518 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 518 (720)
++|...+.||+|+||+||+|.. .+|+.||||++..........+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE 82 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence 5788889999999999999966 469999999997655444556778899999999999999999999999999999999
Q ss_pred eCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCC
Q 004994 519 YGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSG 598 (720)
Q Consensus 519 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~ 598 (720)
|+++++|.+++.. ...+++..+..++.++++||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 83 ~~~~~~l~~~~~~----~~~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 155 (311)
T 4agu_A 83 YCDHTVLHELDRY----QRGVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLTGP 155 (311)
T ss_dssp CCSEEHHHHHHHT----SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC--
T ss_pred eCCCchHHHHHhh----hcCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCCchhccCc
Confidence 9999999988753 34588999999999999999999997 9999999999999999999999999999876432
Q ss_pred CCcccccCccccccCCCCccCC--CCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCch--------
Q 004994 599 STNELSEGLLTAHGSGAPEFES--GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDI-------- 668 (720)
Q Consensus 599 ~~~~~~~~~~~~~~~~aPE~~~--~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~-------- 668 (720)
. .......++.+|+|||.+. ..++.++|||||||++|||+||+.||...........+..........
T Consensus 156 ~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (311)
T 4agu_A 156 S--DYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTN 233 (311)
T ss_dssp ------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTC
T ss_pred c--cccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccc
Confidence 2 1223456788999999883 468999999999999999999999997654322211111110000000
Q ss_pred hhhh--hhcCCCCCch---hhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 669 DALS--RMVDPSLDGA---YLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 669 ~~~~--~~~~~~~~~~---~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.... .+.++..... .....+.++.+++.+||+.||++|||++|++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 234 QYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp GGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred cccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 0000 0001100000 011234568899999999999999999999865
No 98
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=3.3e-40 Score=352.34 Aligned_cols=246 Identities=20% Similarity=0.274 Sum_probs=201.4
Q ss_pred cCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccc-cccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTV-SQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVY 517 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~-~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 517 (720)
++|...+.||+|+||+||+|.. .+|+.||||++.+.. ......+.+.+|+++++.++||||+++++++.+.+..++||
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 120 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence 5678889999999999999976 479999999996542 22345577899999999999999999999999999999999
Q ss_pred eeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCC
Q 004994 518 DYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFS 597 (720)
Q Consensus 518 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~ 597 (720)
||+++|+|.+++.. ...+++.....++.+++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 121 e~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~ 193 (350)
T 1rdq_E 121 EYVAGGEMFSHLRR----IGRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193 (350)
T ss_dssp ECCTTCBHHHHHHH----HCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred cCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEcccccceeccC
Confidence 99999999999853 34688999999999999999999987 999999999999999999999999999987643
Q ss_pred CCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcC
Q 004994 598 GSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVD 676 (720)
Q Consensus 598 ~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (720)
. .....||+.|+|||.+ ...++.++|||||||++|||++|+.||......... ..+..
T Consensus 194 ~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~----------------~~i~~ 252 (350)
T 1rdq_E 194 R-----TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY----------------EKIVS 252 (350)
T ss_dssp C-----BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH----------------HHHHH
T ss_pred C-----cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHH----------------HHHHc
Confidence 2 2235789999999988 557899999999999999999999999754321111 11110
Q ss_pred CCCCchhhHHHHHHHHHHHHHHhccCCCCCCC-----HHHHHHH
Q 004994 677 PSLDGAYLAKSLSRFADIISRCVQWEPGFRPP-----MSEIVQD 715 (720)
Q Consensus 677 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt-----~~evl~~ 715 (720)
... ..+...+.++.+++.+||+.||++||+ ++|+++|
T Consensus 253 ~~~--~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h 294 (350)
T 1rdq_E 253 GKV--RFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294 (350)
T ss_dssp CCC--CCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTS
T ss_pred CCC--CCCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhC
Confidence 000 011123457889999999999999998 8888764
No 99
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=2.2e-40 Score=360.50 Aligned_cols=250 Identities=19% Similarity=0.240 Sum_probs=187.6
Q ss_pred cCCCCC-CeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHH-ccCCCceeEEEeEecc----CCe
Q 004994 440 NSFSEG-NFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTIS-RLRHGNIVELIGYCNE----HGQ 512 (720)
Q Consensus 440 ~~~~~~-~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~-~l~H~niv~l~~~~~~----~~~ 512 (720)
++|... ++||+|+||+||+|.. .+|+.||||++... ..+.+|++++. ..+||||+++++++.. .+.
T Consensus 61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-------~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~ 133 (400)
T 1nxk_A 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-------PKARREVELHWRASQCPHIVRIVDVYENLYAGRKC 133 (400)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEE
T ss_pred ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-------hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcE
Confidence 455554 6899999999999965 57899999998532 35667888774 4589999999998864 567
Q ss_pred EEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcC---CCCeEEccc
Q 004994 513 HLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDE---KLIVRVSDC 589 (720)
Q Consensus 513 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~---~~~~kl~DF 589 (720)
.++||||+++|+|.+++... ....+++..+..++.+++.||.|||+. +||||||||+|||++. ++.+||+||
T Consensus 134 ~~lv~E~~~gg~L~~~l~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~DF 208 (400)
T 1nxk_A 134 LLIVMECLDGGELFSRIQDR--GDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDF 208 (400)
T ss_dssp EEEEEECCCSEEHHHHHHCC-----CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEECCC
T ss_pred EEEEEEeCCCCcHHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEEec
Confidence 89999999999999999653 234689999999999999999999997 9999999999999997 789999999
Q ss_pred cCCCCCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccc-hhhhcccccCc
Q 004994 590 GLAPLLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQS-LVRWAIPRLHD 667 (720)
Q Consensus 590 Gla~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~-~~~~~~~~~~~ 667 (720)
|+++...... ......+|.+|+|||++ .+.|+.++|||||||++|||++|+.||.......... ....
T Consensus 209 G~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~------- 278 (400)
T 1nxk_A 209 GFAKETTSHN---SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTR------- 278 (400)
T ss_dssp TTCEECC--------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHH-------
T ss_pred ccccccCCCC---ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHH-------
Confidence 9998654321 12345678999999998 5679999999999999999999999997543322100 0000
Q ss_pred hhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 668 IDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 668 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
+. ..............+.++.+|+.+||+.||++|||++|++++
T Consensus 279 ---i~-~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 322 (400)
T 1nxk_A 279 ---IR-MGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 322 (400)
T ss_dssp ---HH-HTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred ---HH-cCcccCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 00 000000101112234678899999999999999999999986
No 100
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.2e-40 Score=361.63 Aligned_cols=269 Identities=20% Similarity=0.326 Sum_probs=193.5
Q ss_pred HHhcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccC-CCceeEEEeEeccC--Ce
Q 004994 437 QYTNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLR-HGNIVELIGYCNEH--GQ 512 (720)
Q Consensus 437 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~~~~~~~--~~ 512 (720)
...++|...+.||+|+||+||+|.. .+|+.||||++.+........+.+.+|+.+++++. ||||+++++++... ..
T Consensus 6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~ 85 (388)
T 3oz6_A 6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRD 85 (388)
T ss_dssp HHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSC
T ss_pred cccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCE
Confidence 3567899999999999999999964 57999999999765555556677889999999997 99999999999654 37
Q ss_pred EEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCC
Q 004994 513 HLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLA 592 (720)
Q Consensus 513 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla 592 (720)
.|+||||++ ++|.+++.. ..+++..+..++.|+++||+|||+. +||||||||+|||++.++.+||+|||+|
T Consensus 86 ~~lv~e~~~-~~L~~~~~~-----~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a 156 (388)
T 3oz6_A 86 VYLVFDYME-TDLHAVIRA-----NILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLS 156 (388)
T ss_dssp EEEEEECCS-EEHHHHHHH-----TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEecccC-cCHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEecCCccc
Confidence 899999998 589888853 4688889999999999999999997 9999999999999999999999999999
Q ss_pred CCCCCCC-------------------CcccccCccccccCCCCccCC--CCCCCccchHhHHHHHHHHHhCCCCCCCCCC
Q 004994 593 PLLFSGS-------------------TNELSEGLLTAHGSGAPEFES--GSYSCQSDVYSLGVVMLELLTGRKPYDRSRP 651 (720)
Q Consensus 593 ~~~~~~~-------------------~~~~~~~~~~~~~~~aPE~~~--~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~ 651 (720)
+.+.... .........+|++|+|||.+. ..|+.++|||||||++|||++|+.||.....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~ 236 (388)
T 3oz6_A 157 RSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSST 236 (388)
T ss_dssp EESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred ccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCH
Confidence 8653211 011223356899999999873 4689999999999999999999999976543
Q ss_pred ccccchhhhcccccCchhhhhhhcC------------------CCCCchhh------------HHHHHHHHHHHHHHhcc
Q 004994 652 RGEQSLVRWAIPRLHDIDALSRMVD------------------PSLDGAYL------------AKSLSRFADIISRCVQW 701 (720)
Q Consensus 652 ~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~------------~~~~~~l~~l~~~cl~~ 701 (720)
......+.... .....+.+..+.. ......++ ...++++.+|+.+||+.
T Consensus 237 ~~~~~~i~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~ 315 (388)
T 3oz6_A 237 MNQLERIIGVI-DFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQF 315 (388)
T ss_dssp HHHHHHHHHHH-CCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCS
T ss_pred HHHHHHHHHhc-CCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhcc
Confidence 22111111000 0011111100000 00000000 02245788999999999
Q ss_pred CCCCCCCHHHHHHH
Q 004994 702 EPGFRPPMSEIVQD 715 (720)
Q Consensus 702 dP~~RPt~~evl~~ 715 (720)
||++|||++|+++|
T Consensus 316 dP~~R~t~~e~l~H 329 (388)
T 3oz6_A 316 NPNKRISANDALKH 329 (388)
T ss_dssp SGGGSCCHHHHTTS
T ss_pred CcccCCCHHHHhCC
Confidence 99999999999876
No 101
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.5e-40 Score=352.32 Aligned_cols=256 Identities=24% Similarity=0.360 Sum_probs=195.6
Q ss_pred hcCCCCCCeeccCCCceEEEEEe-CCCcE----EEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeE
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAEL-PGGKL----LAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQH 513 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~----vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~ 513 (720)
.++|...+.||+|+||+||+|.. .+++. ||+|.+.... .....+.+.+|++++++++||||+++++++.... .
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~ 91 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPHVCRLLGICLTST-V 91 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCS-SCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-E
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeecccc-CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-c
Confidence 35788889999999999999965 45554 5777765432 3455678999999999999999999999998764 7
Q ss_pred EEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCC
Q 004994 514 LLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAP 593 (720)
Q Consensus 514 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~ 593 (720)
++|+||+.+|+|.+++... ...+++..+..++.+++.||.|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 92 ~~v~~~~~~g~L~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~DfG~a~ 165 (327)
T 3lzb_A 92 QLITQLMPFGCLLDYVREH---KDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 165 (327)
T ss_dssp EEEECCCSSCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTC--
T ss_pred eEEEEecCCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEccCccee
Confidence 8999999999999998642 35688999999999999999999997 99999999999999999999999999998
Q ss_pred CCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcccccCchhhh
Q 004994 594 LLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDAL 671 (720)
Q Consensus 594 ~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (720)
...............++..|+|||.. ...++.++|||||||++|||++ |+.||...........+..
T Consensus 166 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~----------- 234 (327)
T 3lzb_A 166 LLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK----------- 234 (327)
T ss_dssp --------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHT-----------
T ss_pred EccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHc-----------
Confidence 77544333333344567789999988 5679999999999999999999 9999976433221111100
Q ss_pred hhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 672 SRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 672 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
......+...+.++.+++.+||+.||++|||++|+++.|+++
T Consensus 235 ------~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~ 276 (327)
T 3lzb_A 235 ------GERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKM 276 (327)
T ss_dssp ------TCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ------CCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 000001112335688999999999999999999999999876
No 102
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=1.9e-40 Score=344.74 Aligned_cols=255 Identities=25% Similarity=0.404 Sum_probs=208.2
Q ss_pred hcCCCCCCeeccCCCceEEEEEeC-CCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEE
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVY 517 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 517 (720)
.++|...+.||+|+||+||+|... ++..||+|++... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 12 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 88 (288)
T 3kfa_A 12 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED---TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 88 (288)
T ss_dssp GGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC---STHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEE
T ss_pred ccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC---HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEE
Confidence 456788899999999999999764 5889999999753 334578999999999999999999999999999999999
Q ss_pred eeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCC
Q 004994 518 DYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFS 597 (720)
Q Consensus 518 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~ 597 (720)
||+++++|.+++... ....+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 89 e~~~~~~L~~~~~~~--~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~ 163 (288)
T 3kfa_A 89 EFMTYGNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTG 163 (288)
T ss_dssp ECCTTEEHHHHHHHC--CTTTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCGGGTSCS
T ss_pred EcCCCCcHHHHHHhc--ccCCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCccceeccC
Confidence 999999999999642 235689999999999999999999998 999999999999999999999999999987643
Q ss_pred CCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcccccCchhhhhhhc
Q 004994 598 GSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMV 675 (720)
Q Consensus 598 ~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (720)
.. ........++..|+|||.. ...++.++||||||+++|||++ |+.||...........+ ....
T Consensus 164 ~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~-------------~~~~ 229 (288)
T 3kfa_A 164 DT-YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL-------------EKDY 229 (288)
T ss_dssp SS-SEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHH-------------HTTC
T ss_pred Cc-cccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH-------------hccC
Confidence 32 2233345567789999988 5678999999999999999999 99999754322111111 1111
Q ss_pred CCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 676 DPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 676 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
... .+...++++.+++.+||+.||++|||++|+++.|+++
T Consensus 230 ~~~----~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~ 269 (288)
T 3kfa_A 230 RME----RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269 (288)
T ss_dssp CCC----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCC----CCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHH
Confidence 111 1122346788999999999999999999999999876
No 103
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=3.6e-40 Score=342.01 Aligned_cols=254 Identities=20% Similarity=0.265 Sum_probs=203.8
Q ss_pred HhcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEE
Q 004994 438 YTNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLV 516 (720)
Q Consensus 438 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 516 (720)
+.++|...+.||+|+||.||+|.. .+|+.||+|++..........+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v 83 (284)
T 3kk8_A 4 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 83 (284)
T ss_dssp TTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEE
Confidence 457888999999999999999965 5689999999976544445557789999999999999999999999999999999
Q ss_pred EeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCC---eEEccccCCC
Q 004994 517 YDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLI---VRVSDCGLAP 593 (720)
Q Consensus 517 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~---~kl~DFGla~ 593 (720)
|||+++++|.+.+.. ...+++..+..++.+++.||.|||+. +|+||||||+||+++.++. +||+|||++.
T Consensus 84 ~e~~~~~~l~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~ 156 (284)
T 3kk8_A 84 FDLVTGGELFEDIVA----REFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAI 156 (284)
T ss_dssp ECCCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEECCCTTCE
T ss_pred EecCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEeeceeeE
Confidence 999999999988853 35688999999999999999999997 9999999999999987655 9999999997
Q ss_pred CCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhh
Q 004994 594 LLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALS 672 (720)
Q Consensus 594 ~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (720)
...... ......++..|+|||.. ...++.++||||||+++|||++|+.||...........+....
T Consensus 157 ~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~---------- 223 (284)
T 3kk8_A 157 EVNDSE---AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGA---------- 223 (284)
T ss_dssp ECCSSC---BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC----------
T ss_pred EcccCc---cccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhcc----------
Confidence 664322 22345688999999998 5568999999999999999999999996543221111111000
Q ss_pred hhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 673 RMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 673 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.. .........++++.+++.+||+.||++|||++|++++
T Consensus 224 --~~--~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (284)
T 3kk8_A 224 --YD--YPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 262 (284)
T ss_dssp --CC--CCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred --cc--CCchhhcccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 00 0000111233578899999999999999999999875
No 104
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=1.1e-40 Score=349.04 Aligned_cols=270 Identities=19% Similarity=0.302 Sum_probs=204.1
Q ss_pred cCCCCCCeeccCCCceEEEEEe-----CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccC--Ce
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL-----PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEH--GQ 512 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~-----~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~--~~ 512 (720)
+.|+..+.||+|+||.||+|.+ .+++.||||++.... .....+.+.+|++++++++||||+++++++.+. ..
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 99 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES-GGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNG 99 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC------CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CC
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccc-cchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCce
Confidence 3467789999999999999973 468999999997543 234557899999999999999999999999876 66
Q ss_pred EEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCC
Q 004994 513 HLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLA 592 (720)
Q Consensus 513 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla 592 (720)
.++||||+++++|.+++.. ....+++..+..++.+++.||+|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 100 ~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~ 173 (302)
T 4e5w_A 100 IKLIMEFLPSGSLKEYLPK---NKNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLT 173 (302)
T ss_dssp EEEEEECCTTCBHHHHHHH---HTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTC
T ss_pred EEEEEEeCCCCcHHHHHHh---ccccCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECccccc
Confidence 8999999999999999853 235689999999999999999999997 9999999999999999999999999999
Q ss_pred CCCCCCCCc-ccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccC--ch
Q 004994 593 PLLFSGSTN-ELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLH--DI 668 (720)
Q Consensus 593 ~~~~~~~~~-~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~--~~ 668 (720)
+........ .......++..|+|||.. ...++.++||||||+++|||+||+.|+..... .......+... ..
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~----~~~~~~~~~~~~~~~ 249 (302)
T 4e5w_A 174 KAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMA----LFLKMIGPTHGQMTV 249 (302)
T ss_dssp EECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHH----HHHHHHCSCCGGGHH
T ss_pred ccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhh----HHhhccCCcccccCH
Confidence 876543221 223345577789999988 56688999999999999999999998643210 00000000000 00
Q ss_pred hhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhC
Q 004994 669 DALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCMI 720 (720)
Q Consensus 669 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~ 720 (720)
..+...+........+...++++.+++.+||+.||++|||++|+++.|++++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 250 TRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp HHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHHhccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 0111111111111112234467889999999999999999999999999874
No 105
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=4.1e-40 Score=348.90 Aligned_cols=249 Identities=20% Similarity=0.272 Sum_probs=190.8
Q ss_pred cCCCCCCeeccCCCceEEEEEe----CCCcEEEEEEeccccc--ccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL----PGGKLLAVKKLSNTVS--QRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQH 513 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~----~~g~~vavK~l~~~~~--~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~ 513 (720)
++|...+.||+|+||+||+|+. .+|+.||+|++++... .......+.+|++++++++||||+++++++.+.+..
T Consensus 17 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 96 (327)
T 3a62_A 17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKL 96 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSCE
T ss_pred HHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCEE
Confidence 5688889999999999999976 4789999999976432 123345678999999999999999999999999999
Q ss_pred EEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCC
Q 004994 514 LLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAP 593 (720)
Q Consensus 514 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~ 593 (720)
++||||+++++|.+++.. ...+++.....++.+++.||.|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 97 ~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~ 169 (327)
T 3a62_A 97 YLILEYLSGGELFMQLER----EGIFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCK 169 (327)
T ss_dssp EEEEECCTTEEHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEEECCCSCC-
T ss_pred EEEEeCCCCCcHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEEEEeCCccc
Confidence 999999999999999853 34678889999999999999999997 99999999999999999999999999997
Q ss_pred CCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhh
Q 004994 594 LLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALS 672 (720)
Q Consensus 594 ~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (720)
...... .......++..|+|||.+ ...++.++|||||||++|||++|+.||......... .
T Consensus 170 ~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~----------------~ 231 (327)
T 3a62_A 170 ESIHDG--TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTI----------------D 231 (327)
T ss_dssp -----------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH----------------H
T ss_pred ccccCC--ccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHH----------------H
Confidence 643221 123345688999999998 556899999999999999999999999754321110 0
Q ss_pred hhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCC-----CHHHHHHH
Q 004994 673 RMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRP-----PMSEIVQD 715 (720)
Q Consensus 673 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~evl~~ 715 (720)
.+..... ..+...+.++.+++.+||+.||++|| +++|+++|
T Consensus 232 ~i~~~~~--~~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~h 277 (327)
T 3a62_A 232 KILKCKL--NLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAH 277 (327)
T ss_dssp HHHHTCC--CCCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHS
T ss_pred HHHhCCC--CCCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcC
Confidence 0100000 01112235788999999999999999 78888865
No 106
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=1.6e-40 Score=354.83 Aligned_cols=247 Identities=26% Similarity=0.379 Sum_probs=198.3
Q ss_pred cCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEeccccc-ccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVS-QRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVY 517 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 517 (720)
+.|...+.||+|+||+||+|.. .+|+.||||++..... .....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 133 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 133 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence 4577789999999999999965 6799999999975422 2233467899999999999999999999999999999999
Q ss_pred eeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCC
Q 004994 518 DYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFS 597 (720)
Q Consensus 518 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~ 597 (720)
||+. |+|.+++.. ....+++..+..++.++++||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 134 e~~~-g~l~~~l~~---~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~ 206 (348)
T 1u5q_A 134 EYCL-GSASDLLEV---HKKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP 206 (348)
T ss_dssp ECCS-EEHHHHHHH---HTSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS
T ss_pred ecCC-CCHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeeccCceecCC
Confidence 9998 588887742 245689999999999999999999997 899999999999999999999999999987643
Q ss_pred CCCcccccCccccccCCCCccC----CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhh
Q 004994 598 GSTNELSEGLLTAHGSGAPEFE----SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSR 673 (720)
Q Consensus 598 ~~~~~~~~~~~~~~~~~aPE~~----~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (720)
. ....+++.|+|||.+ .+.++.++|||||||++|||+||+.||......... .. +..
T Consensus 207 ~------~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~--~~-----------~~~ 267 (348)
T 1u5q_A 207 A------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSAL--YH-----------IAQ 267 (348)
T ss_dssp B------CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH--HH-----------HHH
T ss_pred C------CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHH--HH-----------HHh
Confidence 2 235688999999986 456899999999999999999999999654321110 00 000
Q ss_pred hcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 674 MVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 674 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
...+... ....+..+.+++.+||+.||++|||++|++++
T Consensus 268 ~~~~~~~---~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h 306 (348)
T 1u5q_A 268 NESPALQ---SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH 306 (348)
T ss_dssp SCCCCCC---CTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred cCCCCCC---CCCCCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 0011111 11223568899999999999999999999875
No 107
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=4.3e-40 Score=357.55 Aligned_cols=272 Identities=20% Similarity=0.270 Sum_probs=203.7
Q ss_pred hcCCCCCCeeccC--CCceEEEEEeC-CCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEE
Q 004994 439 TNSFSEGNFIGEG--LLGSVYKAELP-GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLL 515 (720)
Q Consensus 439 ~~~~~~~~~lg~G--~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~l 515 (720)
.++|+..+.||+| +||+||+|... +|+.||||++..........+.+.+|++++++++|||||++++++.+.+..++
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 103 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV 103 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence 3568888999999 99999999764 79999999998665445556788899999999999999999999999999999
Q ss_pred EEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCC
Q 004994 516 VYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLL 595 (720)
Q Consensus 516 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~ 595 (720)
||||+++|+|.+++.... ...+++..+..++.|+++||+|||+. +||||||||+|||++.++.+||+|||.+...
T Consensus 104 v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~ 178 (389)
T 3gni_B 104 VTSFMAYGSAKDLICTHF--MDGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSM 178 (389)
T ss_dssp EEECCTTCBHHHHHHHTC--TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred EEEccCCCCHHHHHhhhc--ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccccceee
Confidence 999999999999986431 24588999999999999999999997 9999999999999999999999999998654
Q ss_pred CCCCC-----cccccCccccccCCCCccCCC---CCCCccchHhHHHHHHHHHhCCCCCCCCCCcccc-chhhhcccccC
Q 004994 596 FSGST-----NELSEGLLTAHGSGAPEFESG---SYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQ-SLVRWAIPRLH 666 (720)
Q Consensus 596 ~~~~~-----~~~~~~~~~~~~~~aPE~~~~---~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~-~~~~~~~~~~~ 666 (720)
..... ........++..|+|||.+.+ .++.++|||||||++|||++|+.||......... .......+.+.
T Consensus 179 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 258 (389)
T 3gni_B 179 ISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLL 258 (389)
T ss_dssp EETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC---------
T ss_pred ccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCccc
Confidence 32211 111223467888999999843 6899999999999999999999999764332211 00000000000
Q ss_pred chh-----h-------------hhhhcC---C------CCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 667 DID-----A-------------LSRMVD---P------SLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 667 ~~~-----~-------------~~~~~~---~------~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
+.. . ...... + ..........++++.+|+.+||+.||++|||++|++++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~h 334 (389)
T 3gni_B 259 DTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 334 (389)
T ss_dssp -----------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred cccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcC
Confidence 000 0 000000 0 00001122334678999999999999999999999865
No 108
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.5e-40 Score=353.25 Aligned_cols=263 Identities=19% Similarity=0.195 Sum_probs=202.3
Q ss_pred HHHHHhcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEeccccc---ccccHHHHHHHHHHHHccCCCceeEEEeEecc
Q 004994 434 SLQQYTNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVS---QRQTDEEFLELASTISRLRHGNIVELIGYCNE 509 (720)
Q Consensus 434 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~ 509 (720)
++..+.++|...+.||+|+||+||+|.. .+++.||+|++..... .....+.+.+|++++++++||||+++++++.+
T Consensus 20 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~ 99 (345)
T 3hko_A 20 SLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYED 99 (345)
T ss_dssp CHHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred hhhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhcc
Confidence 3456778899999999999999999965 5788999999865321 23455789999999999999999999999999
Q ss_pred CCeEEEEEeeCCCCCHHHHhhccch------------------------------------hccccCHHHHHHHHHHHHH
Q 004994 510 HGQHLLVYDYGGNCTLHDLLHSDEE------------------------------------AHKKFSWNIRIRVALGAAR 553 (720)
Q Consensus 510 ~~~~~lv~e~~~~gsL~~~l~~~~~------------------------------------~~~~~~~~~~~~i~~~ia~ 553 (720)
.+..++||||+++|+|.+++..... ....+++.....++.++++
T Consensus 100 ~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~ 179 (345)
T 3hko_A 100 EQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFS 179 (345)
T ss_dssp SSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHH
Confidence 9999999999999999999852110 0123456778889999999
Q ss_pred HHHHHHhcCCCCeeecCCCCCCeEEcCCC--CeEEccccCCCCCCCCCCc--ccccCccccccCCCCccCC---CCCCCc
Q 004994 554 ALQYLQEVCEPPIVHGNFKSSNILLDEKL--IVRVSDCGLAPLLFSGSTN--ELSEGLLTAHGSGAPEFES---GSYSCQ 626 (720)
Q Consensus 554 ~L~~LH~~~~~~ivHrDlkp~NiLl~~~~--~~kl~DFGla~~~~~~~~~--~~~~~~~~~~~~~aPE~~~---~~~~~~ 626 (720)
||+|||+. +|+||||||+|||++.++ .+||+|||+++.+...... .......+++.|+|||.+. +.++.+
T Consensus 180 ~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~ 256 (345)
T 3hko_A 180 ALHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPK 256 (345)
T ss_dssp HHHHHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTH
T ss_pred HHHHHHHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcH
Confidence 99999997 899999999999998776 8999999999865432211 1223456889999999873 568999
Q ss_pred cchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcCCC--CCchhhHHHHHHHHHHHHHHhccCCC
Q 004994 627 SDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPS--LDGAYLAKSLSRFADIISRCVQWEPG 704 (720)
Q Consensus 627 ~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~l~~~cl~~dP~ 704 (720)
+|||||||++|||++|+.||......... ..+.... .........+.++.+++.+||+.||+
T Consensus 257 ~DiwslG~il~el~~g~~pf~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~ 320 (345)
T 3hko_A 257 CDAWSAGVLLHLLLMGAVPFPGVNDADTI----------------SQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVD 320 (345)
T ss_dssp HHHHHHHHHHHHHHHSSCSSCCSSHHHHH----------------HHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTT
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCChHHHH----------------HHHHhcccccCCcccccCCHHHHHHHHHHcCCChh
Confidence 99999999999999999999754322111 1111111 01111122346788999999999999
Q ss_pred CCCCHHHHHHH
Q 004994 705 FRPPMSEIVQD 715 (720)
Q Consensus 705 ~RPt~~evl~~ 715 (720)
+|||+.|++++
T Consensus 321 ~Rps~~~~l~h 331 (345)
T 3hko_A 321 ERFDAMRALQH 331 (345)
T ss_dssp TSCCHHHHHHS
T ss_pred HCCCHHHHhcC
Confidence 99999999975
No 109
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=4.2e-40 Score=365.50 Aligned_cols=196 Identities=20% Similarity=0.314 Sum_probs=155.0
Q ss_pred hcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEec-----cCCe
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCN-----EHGQ 512 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~-----~~~~ 512 (720)
.++|...+.||+|+||+||+|.. .+|+.||||++..........+.+.+|++++++++|||||++++++. ....
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 131 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE 131 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence 36788899999999999999964 57899999999765555556678999999999999999999999984 3357
Q ss_pred EEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCC
Q 004994 513 HLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLA 592 (720)
Q Consensus 513 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla 592 (720)
.|+||||++ ++|.+++.. ...+++..+..++.|+++||.|||+. +||||||||+|||++.++++||+|||+|
T Consensus 132 ~~lv~e~~~-~~L~~~~~~----~~~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFGla 203 (458)
T 3rp9_A 132 LYVVLEIAD-SDFKKLFRT----PVYLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLA 203 (458)
T ss_dssp EEEEECCCS-EEHHHHHHS----SCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEeccc-cchhhhccc----CCCCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeecccccc
Confidence 899999985 689988853 35689999999999999999999997 9999999999999999999999999999
Q ss_pred CCCCCCCCc-------------------------ccccCccccccCCCCccC--CCCCCCccchHhHHHHHHHHHhC
Q 004994 593 PLLFSGSTN-------------------------ELSEGLLTAHGSGAPEFE--SGSYSCQSDVYSLGVVMLELLTG 642 (720)
Q Consensus 593 ~~~~~~~~~-------------------------~~~~~~~~~~~~~aPE~~--~~~~~~~~Dv~S~Gvvl~elltG 642 (720)
+........ .......+|++|+|||.+ ...|+.++|||||||++|||+||
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 204 RTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp BCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred hhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 876432211 112345679999999965 45699999999999999999993
No 110
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=6.4e-40 Score=363.33 Aligned_cols=262 Identities=19% Similarity=0.233 Sum_probs=196.0
Q ss_pred hcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccC------C
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEH------G 511 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~------~ 511 (720)
.++|...+.||+|+||+||+|.. .+|+.||||++.+........+.+.+|+++++.++|||||++++++... .
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 46788899999999999999954 5799999999986554455667889999999999999999999999644 4
Q ss_pred eEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccC
Q 004994 512 QHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGL 591 (720)
Q Consensus 512 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGl 591 (720)
..++||||++++ +.+.+. ..+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 141 ~~~lv~E~~~~~-l~~~~~------~~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DFG~ 210 (464)
T 3ttj_A 141 DVYLVMELMDAN-LCQVIQ------MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGL 210 (464)
T ss_dssp EEEEEEECCSEE-HHHHHT------SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCC
T ss_pred eEEEEEeCCCCC-HHHHHh------hcCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEEEe
Confidence 679999999874 665553 2478889999999999999999997 999999999999999999999999999
Q ss_pred CCCCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchh-hhcc-------
Q 004994 592 APLLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLV-RWAI------- 662 (720)
Q Consensus 592 a~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~-~~~~------- 662 (720)
|+..... .......+|++|+|||.+ ...|+.++|||||||++|||++|+.||...+..+....+ +...
T Consensus 211 a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~ 287 (464)
T 3ttj_A 211 ARTAGTS---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFM 287 (464)
T ss_dssp C-----C---CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHH
T ss_pred eeecCCC---cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHH
Confidence 9876432 223346789999999998 557999999999999999999999999764422111100 0000
Q ss_pred cccCchhhhhhhcC---------------CCC---CchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 663 PRLHDIDALSRMVD---------------PSL---DGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 663 ~~~~~~~~~~~~~~---------------~~~---~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
..+. ......+. ... ..........++.+|+.+||+.||++|||++|+++|
T Consensus 288 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 356 (464)
T 3ttj_A 288 KKLQ--PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356 (464)
T ss_dssp TTSC--HHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HHcc--hhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0000 00000000 000 011122335678999999999999999999999975
No 111
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=4.5e-40 Score=348.16 Aligned_cols=249 Identities=20% Similarity=0.292 Sum_probs=180.8
Q ss_pred CCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccC-CCceeEEEeEeccCCeEEEEEeeCC
Q 004994 444 EGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLR-HGNIVELIGYCNEHGQHLLVYDYGG 521 (720)
Q Consensus 444 ~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~~~~~~~~~~~lv~e~~~ 521 (720)
..+.||+|+||+||+|.. .+|+.||||++.+. ....+.+|+++++++. ||||+++++++.+.+..++||||++
T Consensus 15 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 89 (325)
T 3kn6_A 15 KDKPLGEGSFSICRKCVHKKSNQAFAVKIISKR-----MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLN 89 (325)
T ss_dssp TSCCSEEETTEEEEEEEETTTCCEEEEEEEEGG-----GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred CCCccccCCCeEEEEEEECCCCCEEEEEEEChh-----hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccC
Confidence 358899999999999966 46899999998642 3457789999999997 9999999999999999999999999
Q ss_pred CCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCC---CeEEccccCCCCCCCC
Q 004994 522 NCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKL---IVRVSDCGLAPLLFSG 598 (720)
Q Consensus 522 ~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~---~~kl~DFGla~~~~~~ 598 (720)
+|+|.+++.. ...+++..+..++.++++||+|||+. +|+||||||+|||++.++ .+||+|||+++.....
T Consensus 90 ~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 162 (325)
T 3kn6_A 90 GGELFERIKK----KKHFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPD 162 (325)
T ss_dssp SCBHHHHHHH----CSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-
T ss_pred CCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEeccccceecCCC
Confidence 9999999853 35689999999999999999999987 999999999999997765 8999999999865432
Q ss_pred CCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcCC
Q 004994 599 STNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDP 677 (720)
Q Consensus 599 ~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (720)
.. ......++..|+|||.+ ...++.++|||||||++|||++|+.||........... ..+....+...
T Consensus 163 ~~--~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~---------~~~~~~~i~~~ 231 (325)
T 3kn6_A 163 NQ--PLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTS---------AVEIMKKIKKG 231 (325)
T ss_dssp -----------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCC---------HHHHHHHHTTT
T ss_pred CC--cccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCcccccccc---------HHHHHHHHHcC
Confidence 21 22334578999999998 55799999999999999999999999975432111000 01111122211
Q ss_pred C--CCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 678 S--LDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 678 ~--~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
. .........++++.+++.+||+.||++|||++|++++
T Consensus 232 ~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 271 (325)
T 3kn6_A 232 DFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYN 271 (325)
T ss_dssp CCCCCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTC
T ss_pred CCCCCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhcC
Confidence 1 1222223345788999999999999999999998754
No 112
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=5.3e-40 Score=339.48 Aligned_cols=252 Identities=19% Similarity=0.242 Sum_probs=204.1
Q ss_pred HhcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEE
Q 004994 438 YTNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLV 516 (720)
Q Consensus 438 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 516 (720)
+.++|...+.||+|+||+||+|.. .++..||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (277)
T 3f3z_A 7 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYF--VEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLV 84 (277)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGG--CSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhc--cchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEE
Confidence 456788889999999999999965 457899999997543 24467899999999999999999999999999999999
Q ss_pred EeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEE---cCCCCeEEccccCCC
Q 004994 517 YDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILL---DEKLIVRVSDCGLAP 593 (720)
Q Consensus 517 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl---~~~~~~kl~DFGla~ 593 (720)
|||+++++|.+++.. ...+++..+..++.++++||.|||+. +|+||||||+|||+ +.++.+||+|||++.
T Consensus 85 ~e~~~~~~L~~~~~~----~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~ 157 (277)
T 3f3z_A 85 MELCTGGELFERVVH----KRVFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAA 157 (277)
T ss_dssp EECCCSCBHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCE
T ss_pred EeccCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEecccce
Confidence 999999999998853 35689999999999999999999997 99999999999999 788999999999998
Q ss_pred CCCCCCCcccccCccccccCCCCccCCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhh
Q 004994 594 LLFSGSTNELSEGLLTAHGSGAPEFESGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSR 673 (720)
Q Consensus 594 ~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (720)
...... ......++..|+|||...+.++.++||||||+++|||+||+.||...........+...
T Consensus 158 ~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~------------ 222 (277)
T 3f3z_A 158 RFKPGK---MMRTKVGTPYYVSPQVLEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREG------------ 222 (277)
T ss_dssp ECCTTS---CBCCCCSCTTTCCHHHHTTCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------------
T ss_pred eccCcc---chhccCCCCCccChHHhcccCCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhC------------
Confidence 764332 22345688999999999888999999999999999999999999754321111100000
Q ss_pred hcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 674 MVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 674 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
............+.++.+++.+||+.||++|||+.|++++
T Consensus 223 --~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 262 (277)
T 3f3z_A 223 --TFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEH 262 (277)
T ss_dssp --CCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred --CCCCCchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0011111111234678899999999999999999999864
No 113
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=4.1e-40 Score=345.90 Aligned_cols=269 Identities=19% Similarity=0.233 Sum_probs=196.8
Q ss_pred HhcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEeccccc---ccccHHHHHHHHHHHHcc---CCCceeEEEeEeccC
Q 004994 438 YTNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVS---QRQTDEEFLELASTISRL---RHGNIVELIGYCNEH 510 (720)
Q Consensus 438 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~~~~e~~~l~~l---~H~niv~l~~~~~~~ 510 (720)
..++|...+.||+|+||+||+|.. .+|+.||||++..... .......+.+|+++++++ +||||++++++|...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 467899999999999999999975 5789999999864321 112234566777776666 499999999999765
Q ss_pred C-----eEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeE
Q 004994 511 G-----QHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVR 585 (720)
Q Consensus 511 ~-----~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~k 585 (720)
. ..++||||++ ++|.+++.... ...+++..+..++.++++||+|||+. +|+||||||+|||++.++.+|
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~--~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~k 160 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAP--PPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVK 160 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCC--TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSCEE
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhcc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEE
Confidence 4 5799999998 59999986432 23489999999999999999999997 899999999999999999999
Q ss_pred EccccCCCCCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccc
Q 004994 586 VSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPR 664 (720)
Q Consensus 586 l~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~ 664 (720)
|+|||+++...... ......++..|+|||.+ .+.++.++|||||||++|||++|+.||...........+......
T Consensus 161 l~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~ 237 (308)
T 3g33_A 161 LADFGLARIYSYQM---ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGL 237 (308)
T ss_dssp ECSCSCTTTSTTCC---CSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCC
T ss_pred EeeCccccccCCCc---ccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCC
Confidence 99999998764322 22345679999999998 667999999999999999999999999764432211111000000
Q ss_pred cCc--hh---h-hhhhcCCCCC---chhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 665 LHD--ID---A-LSRMVDPSLD---GAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 665 ~~~--~~---~-~~~~~~~~~~---~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
... +. . ....+.+... .....+..+++.+++.+||+.||++|||++|+++|
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 297 (308)
T 3g33_A 238 PPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH 297 (308)
T ss_dssp CCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred CChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcC
Confidence 000 00 0 0000000000 01111234678899999999999999999999875
No 114
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.7e-39 Score=343.96 Aligned_cols=269 Identities=22% Similarity=0.312 Sum_probs=199.7
Q ss_pred HHHHHHhcCCCCCCeeccCCCceEEEEEeCCCcEEEEEEecccccccccHHHHHHHHHHHHcc--CCCceeEEEeEeccC
Q 004994 433 ASLQQYTNSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRL--RHGNIVELIGYCNEH 510 (720)
Q Consensus 433 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l--~H~niv~l~~~~~~~ 510 (720)
.......++|...+.||+|+||+||+|... |+.||||++... ....+..|.+++... +||||+++++++...
T Consensus 30 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~-----~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~ 103 (337)
T 3mdy_A 30 LVQRTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT-----EEASWFRETEIYQTVLMRHENILGFIAADIKG 103 (337)
T ss_dssp HHHTTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG-----GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEES
T ss_pred ccccccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc-----ccchhhhHHHHHHHHhhcCCCeeeEEEEEccC
Confidence 334455678999999999999999999875 899999998532 234455566666554 999999999999776
Q ss_pred ----CeEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhc-----CCCCeeecCCCCCCeEEcCC
Q 004994 511 ----GQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEV-----CEPPIVHGNFKSSNILLDEK 581 (720)
Q Consensus 511 ----~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~-----~~~~ivHrDlkp~NiLl~~~ 581 (720)
...++||||+++|+|.+++.. ..+++..+..++.+++.||+|||+. +.++||||||||+|||++.+
T Consensus 104 ~~~~~~~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~ 178 (337)
T 3mdy_A 104 TGSWTQLYLITDYHENGSLYDYLKS-----TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKN 178 (337)
T ss_dssp CGGGCEEEEEECCCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTT
T ss_pred CCCCCceEEEEeccCCCcHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCC
Confidence 789999999999999999953 3588999999999999999999975 24489999999999999999
Q ss_pred CCeEEccccCCCCCCCCCCcc--cccCccccccCCCCccCCC-CCCCc------cchHhHHHHHHHHHhC----------
Q 004994 582 LIVRVSDCGLAPLLFSGSTNE--LSEGLLTAHGSGAPEFESG-SYSCQ------SDVYSLGVVMLELLTG---------- 642 (720)
Q Consensus 582 ~~~kl~DFGla~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~-~~~~~------~Dv~S~Gvvl~elltG---------- 642 (720)
+.+||+|||+++.+....... ......++..|+|||.+.+ .++.+ +|||||||++|||+||
T Consensus 179 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~ 258 (337)
T 3mdy_A 179 GTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEY 258 (337)
T ss_dssp SCEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCC
T ss_pred CCEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccc
Confidence 999999999997664332211 1224568899999999844 34443 9999999999999999
Q ss_pred CCCCCCCCCccccchhhhcccccCchhhhhhhcCCCCCch-hhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 643 RKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDGA-YLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 643 ~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
+.||.......... ... .. ........+..... ....++.++.+++.+||+.||++|||+.||+++|+++
T Consensus 259 ~~p~~~~~~~~~~~-~~~-----~~-~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l 329 (337)
T 3mdy_A 259 QLPYHDLVPSDPSY-EDM-----RE-IVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKM 329 (337)
T ss_dssp CCTTTTTSCSSCCH-HHH-----HH-HHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHH
T ss_pred cccHhhhcCCCCch-hhh-----HH-HHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHH
Confidence 55554322111100 000 00 00001112222221 2236778899999999999999999999999999986
No 115
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=2.3e-40 Score=355.83 Aligned_cols=273 Identities=21% Similarity=0.295 Sum_probs=207.5
Q ss_pred cccCHHHHHHHhcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccC-----CCcee
Q 004994 428 SVFTIASLQQYTNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLR-----HGNIV 501 (720)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~-----H~niv 501 (720)
..++..+...+.++|...+.||+|+||+||+|.. .+++.||||++... ....+.+..|++++++++ ||||+
T Consensus 23 ~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~h~~iv 99 (360)
T 3llt_A 23 VHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI---KKYTRSAKIEADILKKIQNDDINNNNIV 99 (360)
T ss_dssp GSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---HHHHHHHHHHHHHHHHTCCCSTTGGGBC
T ss_pred eeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc---hhhhhhhHHHHHHHHHhcccCCCCCCee
Confidence 3455556666788999999999999999999966 57899999999642 344567788999999986 99999
Q ss_pred EEEeEeccCCeEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcC-
Q 004994 502 ELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDE- 580 (720)
Q Consensus 502 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~- 580 (720)
++++++...+..++||||+ +++|.+++.... ...+++..+..++.|++.||+|||+. +||||||||+|||++.
T Consensus 100 ~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~ 173 (360)
T 3llt_A 100 KYHGKFMYYDHMCLIFEPL-GPSLYEIITRNN--YNGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLDDP 173 (360)
T ss_dssp CEEEEEEETTEEEEEECCC-CCBHHHHHHHTT--TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCT
T ss_pred cccceeeECCeeEEEEcCC-CCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEccc
Confidence 9999999999999999999 889999986432 24588999999999999999999987 9999999999999975
Q ss_pred ------------------------CCCeEEccccCCCCCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHH
Q 004994 581 ------------------------KLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVV 635 (720)
Q Consensus 581 ------------------------~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvv 635 (720)
++.+||+|||+|+..... .....++..|+|||.+ ...++.++|||||||+
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~i 248 (360)
T 3llt_A 174 YFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY-----HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCV 248 (360)
T ss_dssp TCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSC-----CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHH
T ss_pred cccccccchhcccccccccccccCCCCEEEEeccCceecCCC-----CcCccCcccccCcHHHcCCCCCCccchHHHHHH
Confidence 789999999999865322 2235678999999988 5579999999999999
Q ss_pred HHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhh--------c---------CCCCC------------chhhHH
Q 004994 636 MLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRM--------V---------DPSLD------------GAYLAK 686 (720)
Q Consensus 636 l~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~---------~~~~~------------~~~~~~ 686 (720)
+|||+||+.||...........+.......... ..... . ..... ......
T Consensus 249 l~ell~g~~pf~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 327 (360)
T 3llt_A 249 LAELYTGSLLFRTHEHMEHLAMMESIIQPIPKN-MLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKII 327 (360)
T ss_dssp HHHHHHSSCSCCCSSHHHHHHHHHHHTCCCCHH-HHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHC
T ss_pred HHHHHHCCCCCCCCcHHHHHHHHHHhcCCCCHH-HHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccc
Confidence 999999999997644322111111111111100 00000 0 00000 000111
Q ss_pred HHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 687 SLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 687 ~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
..+.+.+|+.+||+.||++|||++|++++
T Consensus 328 ~~~~l~~li~~~L~~dP~~Rpta~elL~h 356 (360)
T 3llt_A 328 KHELFCDFLYSILQIDPTLRPSPAELLKH 356 (360)
T ss_dssp CCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred hHHHHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 12568899999999999999999999875
No 116
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=5.2e-40 Score=339.88 Aligned_cols=254 Identities=24% Similarity=0.368 Sum_probs=204.4
Q ss_pred hcCCCCCCeeccCCCceEEEEEeCCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEe
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYD 518 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 518 (720)
.++|...+.||+|+||.||+|...+++.||||++.... ...+.+.+|++++++++||||+++++++.+ +..++|||
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e 87 (279)
T 1qpc_A 12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS---MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITE 87 (279)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS---SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred HHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc---ccHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEEEEe
Confidence 35677889999999999999998888899999997542 345789999999999999999999999874 45899999
Q ss_pred eCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCC
Q 004994 519 YGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSG 598 (720)
Q Consensus 519 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~ 598 (720)
|+++++|.+++... ....+++..+..++.++++||+|||+. +|+||||||+||++++++.+||+|||+++.....
T Consensus 88 ~~~~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 162 (279)
T 1qpc_A 88 YMENGSLVDFLKTP--SGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDN 162 (279)
T ss_dssp CCTTCBHHHHTTSH--HHHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECSSS
T ss_pred cCCCCCHHHHHhcC--CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCcccccccCc
Confidence 99999999999642 223688999999999999999999997 9999999999999999999999999999876433
Q ss_pred CCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcccccCchhhhhhhcC
Q 004994 599 STNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVD 676 (720)
Q Consensus 599 ~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (720)
.. .......++..|+|||.. .+.++.++||||||+++|||+| |+.||........ ... +.+-..
T Consensus 163 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~---~~~----------~~~~~~ 228 (279)
T 1qpc_A 163 EY-TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV---IQN----------LERGYR 228 (279)
T ss_dssp CE-ECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHH---HHH----------HHTTCC
T ss_pred cc-ccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHH---HHH----------HhcccC
Confidence 21 122334457789999998 4678999999999999999999 9999975332111 110 000000
Q ss_pred CCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 677 PSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 677 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
.. .+...+.++.+++.+||+.||++|||++++++.|+++
T Consensus 229 ~~----~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~ 267 (279)
T 1qpc_A 229 MV----RPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 267 (279)
T ss_dssp CC----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CC----CcccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHH
Confidence 11 1112346788999999999999999999999999876
No 117
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=1.9e-40 Score=357.01 Aligned_cols=268 Identities=19% Similarity=0.241 Sum_probs=198.8
Q ss_pred hcCCCCCCeeccCCCceEEEEEeCC------CcEEEEEEeccccccc---------ccHHHHHHHHHHHHccCCCceeEE
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAELPG------GKLLAVKKLSNTVSQR---------QTDEEFLELASTISRLRHGNIVEL 503 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~~~------g~~vavK~l~~~~~~~---------~~~~~~~~e~~~l~~l~H~niv~l 503 (720)
.++|...+.||+|+||+||+|.... ++.||||++....... .....+..|+..++.++||||+++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~ 113 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY 113 (364)
T ss_dssp CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence 4578888999999999999997654 4789999986542110 111234556667788899999999
Q ss_pred EeEeccC----CeEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEc
Q 004994 504 IGYCNEH----GQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLD 579 (720)
Q Consensus 504 ~~~~~~~----~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~ 579 (720)
++++... ...++||||+ +++|.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+|||++
T Consensus 114 ~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~---~~~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Nill~ 186 (364)
T 3op5_A 114 WGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEA---NAKRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLLLN 186 (364)
T ss_dssp EEEEEEEETTEEEEEEEEECE-EEEHHHHHHH---TTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEE
T ss_pred EeeeeeccCCcceEEEEEeCC-CCCHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHEEEe
Confidence 9998654 4589999999 9999999863 235689999999999999999999997 999999999999999
Q ss_pred --CCCCeEEccccCCCCCCCCCCcc-----cccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCC
Q 004994 580 --EKLIVRVSDCGLAPLLFSGSTNE-----LSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRP 651 (720)
Q Consensus 580 --~~~~~kl~DFGla~~~~~~~~~~-----~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~ 651 (720)
.++.+||+|||+|+.+....... ......+|..|+|||.+ ...++.++|||||||++|||+||+.||.....
T Consensus 187 ~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~ 266 (364)
T 3op5_A 187 YKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLK 266 (364)
T ss_dssp SSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTT
T ss_pred cCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCcccccc
Confidence 88999999999998764322111 11234589999999998 44699999999999999999999999974322
Q ss_pred ccccchhhhcccccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhC
Q 004994 652 RGEQSLVRWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCMI 720 (720)
Q Consensus 652 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~ 720 (720)
... ......... ...+..++++.+. ....+.++.+++.+||+.||++||++++|++.|++++
T Consensus 267 ~~~--~~~~~~~~~--~~~~~~~~~~~~~---~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~ 328 (364)
T 3op5_A 267 DPK--YVRDSKIRY--RENIASLMDKCFP---AANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGL 328 (364)
T ss_dssp CHH--HHHHHHHHH--HHCHHHHHHHHSC---TTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHH
T ss_pred CHH--HHHHHHHHh--hhhHHHHHHHhcc---cccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHH
Confidence 111 111100000 0111111111110 0122467889999999999999999999999998763
No 118
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=3.2e-40 Score=352.80 Aligned_cols=249 Identities=22% Similarity=0.298 Sum_probs=186.8
Q ss_pred HhcCCCCCCeeccCCCceEEEEEeC-CCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEE
Q 004994 438 YTNSFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLV 516 (720)
Q Consensus 438 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 516 (720)
+.+.|...+.||+|+||+||+|... +++.||||++.... ..+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 126 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV----DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLV 126 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC--------------CHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch----hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEE
Confidence 4567888999999999999999765 68899999997542 345688999999999999999999999999999999
Q ss_pred EeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcC---CCCeEEccccCCC
Q 004994 517 YDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDE---KLIVRVSDCGLAP 593 (720)
Q Consensus 517 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~---~~~~kl~DFGla~ 593 (720)
|||+++|+|.+++.. ...+++..+..++.++++||.|||+. +|+||||||+|||++. ++.+||+|||+++
T Consensus 127 ~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~ 199 (349)
T 2w4o_A 127 LELVTGGELFDRIVE----KGYYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSK 199 (349)
T ss_dssp ECCCCSCBHHHHHTT----CSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCCC---
T ss_pred EEeCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccCcccc
Confidence 999999999999853 34588999999999999999999997 9999999999999975 8899999999998
Q ss_pred CCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhh
Q 004994 594 LLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALS 672 (720)
Q Consensus 594 ~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (720)
...... ......++..|+|||.+ ...++.++|||||||++|||++|+.||........ .. .
T Consensus 200 ~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~--~~-------------~ 261 (349)
T 2w4o_A 200 IVEHQV---LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQF--MF-------------R 261 (349)
T ss_dssp ----------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHH--HH-------------H
T ss_pred ccCccc---ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHH--HH-------------H
Confidence 764321 22345688999999998 45789999999999999999999999965432210 00 0
Q ss_pred hhcCCC--CCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 673 RMVDPS--LDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 673 ~~~~~~--~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.+.... .........+.++.+++.+||+.||++|||+.|++++
T Consensus 262 ~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 306 (349)
T 2w4o_A 262 RILNCEYYFISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQH 306 (349)
T ss_dssp HHHTTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred HHHhCCCccCCchhhhCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 011100 0001112234678899999999999999999999875
No 119
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=4.6e-40 Score=351.26 Aligned_cols=250 Identities=20% Similarity=0.242 Sum_probs=201.0
Q ss_pred hcCCCCCCeeccCCCceEEEEEeC-CCcEEEEEEeccccc-ccccHHHHHHHHHHHHcc-CCCceeEEEeEeccCCeEEE
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVS-QRQTDEEFLELASTISRL-RHGNIVELIGYCNEHGQHLL 515 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~l 515 (720)
.++|...+.||+|+||+||+|+.. +|+.||||++.+... .....+.+..|.+++..+ +||||+++++++.+.+..|+
T Consensus 19 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 98 (353)
T 2i0e_A 19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF 98 (353)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEE
Confidence 467888999999999999999765 588999999975422 234556788999999888 89999999999999999999
Q ss_pred EEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCC
Q 004994 516 VYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLL 595 (720)
Q Consensus 516 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~ 595 (720)
||||+++|+|.+++.. ...+++.....++.+++.||+|||+. +||||||||+|||++.++++||+|||+++..
T Consensus 99 v~E~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~ 171 (353)
T 2i0e_A 99 VMEYVNGGDLMYHIQQ----VGRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEN 171 (353)
T ss_dssp EEECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred EEeCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEEeCCccccc
Confidence 9999999999999853 34688999999999999999999997 9999999999999999999999999999864
Q ss_pred CCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhh
Q 004994 596 FSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRM 674 (720)
Q Consensus 596 ~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (720)
.... .......||+.|+|||.+ ...++.++|||||||++|||++|+.||......... ..+
T Consensus 172 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~----------------~~i 233 (353)
T 2i0e_A 172 IWDG--VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELF----------------QSI 233 (353)
T ss_dssp CCTT--CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH----------------HHH
T ss_pred ccCC--cccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHHH----------------HHH
Confidence 3221 223346789999999998 557899999999999999999999999754321111 111
Q ss_pred cCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCC-----HHHHHHH
Q 004994 675 VDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPP-----MSEIVQD 715 (720)
Q Consensus 675 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt-----~~evl~~ 715 (720)
..... .++...+.++.+++.+||+.||++||+ ++|+++|
T Consensus 234 ~~~~~--~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h 277 (353)
T 2i0e_A 234 MEHNV--AYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 277 (353)
T ss_dssp HHCCC--CCCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTS
T ss_pred HhCCC--CCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 11000 011123467889999999999999995 5777654
No 120
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=6.4e-40 Score=366.69 Aligned_cols=254 Identities=21% Similarity=0.323 Sum_probs=205.3
Q ss_pred HhcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEE
Q 004994 438 YTNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLV 516 (720)
Q Consensus 438 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 516 (720)
+.++|...+.||+|+||+||+|.. .+++.||||++.+..........+.+|++++++++|||||++++++.+.+..++|
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 99 (486)
T 3mwu_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (486)
T ss_dssp HHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEE
Confidence 456788899999999999999965 4799999999975544445567899999999999999999999999999999999
Q ss_pred EeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEc---CCCCeEEccccCCC
Q 004994 517 YDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLD---EKLIVRVSDCGLAP 593 (720)
Q Consensus 517 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~---~~~~~kl~DFGla~ 593 (720)
|||+.+|+|.+.+.. ...+++.....++.+++.||.|||+. +||||||||+|||++ .++.+||+|||+++
T Consensus 100 ~e~~~~~~L~~~~~~----~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 172 (486)
T 3mwu_A 100 GELYTGGELFDEIIK----RKRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLST 172 (486)
T ss_dssp ECCCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEECSCSCTT
T ss_pred EEcCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEEECCcCe
Confidence 999999999998853 35689999999999999999999997 999999999999995 46689999999998
Q ss_pred CCCCCCCcccccCccccccCCCCccCCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhh
Q 004994 594 LLFSGSTNELSEGLLTAHGSGAPEFESGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSR 673 (720)
Q Consensus 594 ~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (720)
...... ......++++|+|||.+.+.|+.++|||||||++|||++|+.||...........+...
T Consensus 173 ~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~------------ 237 (486)
T 3mwu_A 173 CFQQNT---KMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETG------------ 237 (486)
T ss_dssp TBCCC-------CCTTGGGGCCGGGGGSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT------------
T ss_pred ECCCCC---ccCCCcCCCCCCCHHHhCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC------------
Confidence 764322 22345689999999999888999999999999999999999999754322111111000
Q ss_pred hcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 674 MVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 674 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
............++++.+++.+||+.||++|||+.|++++
T Consensus 238 --~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 238 --KYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp --CCCSCSGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred --CCCCCCcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0000111122334678899999999999999999999985
No 121
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=1.3e-40 Score=362.03 Aligned_cols=260 Identities=18% Similarity=0.213 Sum_probs=204.0
Q ss_pred HHHHHHhcCCCCCCeeccCCCceEEEEEeC-CCcEEEEEEecccc-cccccHHHHHHHHHHHHccCCCceeEEEeEeccC
Q 004994 433 ASLQQYTNSFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTV-SQRQTDEEFLELASTISRLRHGNIVELIGYCNEH 510 (720)
Q Consensus 433 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~-~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~ 510 (720)
.++....++|...+.||+|+||+||+|+.. +++.||+|++.+.. ......+.+.+|+++++.++|||||+++++|.+.
T Consensus 62 ~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~ 141 (410)
T 3v8s_A 62 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD 141 (410)
T ss_dssp HHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred HhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEEC
Confidence 344445678999999999999999999764 68999999996532 1222334588999999999999999999999999
Q ss_pred CeEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEcccc
Q 004994 511 GQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCG 590 (720)
Q Consensus 511 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFG 590 (720)
+..|+||||+++|+|.+++.. ..+++.....++.+++.||+|||+. +||||||||+|||++.++++||+|||
T Consensus 142 ~~~~lV~E~~~gg~L~~~l~~-----~~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFG 213 (410)
T 3v8s_A 142 RYLYMVMEYMPGGDLVNLMSN-----YDVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFG 213 (410)
T ss_dssp SEEEEEECCCTTEEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCT
T ss_pred CEEEEEEeCCCCCcHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCEEEeccc
Confidence 999999999999999998852 3588889999999999999999997 99999999999999999999999999
Q ss_pred CCCCCCCCCCcccccCccccccCCCCccCC-CC----CCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhccccc
Q 004994 591 LAPLLFSGSTNELSEGLLTAHGSGAPEFES-GS----YSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRL 665 (720)
Q Consensus 591 la~~~~~~~~~~~~~~~~~~~~~~aPE~~~-~~----~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~ 665 (720)
+|+.+.... ........||+.|+|||++. .. |+.++|||||||++|||+||+.||...........+.
T Consensus 214 ~a~~~~~~~-~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~------ 286 (410)
T 3v8s_A 214 TCMKMNKEG-MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIM------ 286 (410)
T ss_dssp TCEECCTTS-EEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHH------
T ss_pred eeEeeccCC-cccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHH------
Confidence 998764332 11233467899999999873 22 7899999999999999999999997543221111000
Q ss_pred CchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCC--CCCHHHHHHH
Q 004994 666 HDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGF--RPPMSEIVQD 715 (720)
Q Consensus 666 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~--RPt~~evl~~ 715 (720)
... ....-+. ....+.++.+|+.+||+.+|.+ ||+++||++|
T Consensus 287 -~~~--~~~~~p~-----~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 287 -NHK--NSLTFPD-----DNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp -THH--HHCCCCT-----TCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred -hcc--ccccCCC-----cccccHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence 000 0000010 0112357889999999999988 9999999875
No 122
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=2.2e-40 Score=373.86 Aligned_cols=255 Identities=27% Similarity=0.406 Sum_probs=205.4
Q ss_pred hcCCCCCCeeccCCCceEEEEEeCCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEe
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYD 518 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 518 (720)
.++|...+.||+|+||+||+|.+.++..||||+++... ...++|.+|++++++++|||||++++++.+ +..++|||
T Consensus 266 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e 341 (535)
T 2h8h_A 266 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT---MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTE 341 (535)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS---SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEC
T ss_pred hhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC---CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeee
Confidence 35577788999999999999998888889999997542 345789999999999999999999999976 67899999
Q ss_pred eCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCC
Q 004994 519 YGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSG 598 (720)
Q Consensus 519 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~ 598 (720)
|+++|+|.+++... ....+++..+..++.++++||+|||+. +||||||||+|||++.++.+||+|||+++.+...
T Consensus 342 ~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 416 (535)
T 2h8h_A 342 YMSKGSLLDFLKGE--TGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDN 416 (535)
T ss_dssp CCTTEEHHHHHSHH--HHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCH
T ss_pred hhcCCcHHHHHhhc--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEcccccceecCCC
Confidence 99999999999632 234588999999999999999999997 8999999999999999999999999999876432
Q ss_pred CCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcccccCchhhhhhhcC
Q 004994 599 STNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVD 676 (720)
Q Consensus 599 ~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (720)
. ........++..|+|||.+ .+.++.++|||||||++|||+| |+.||...........+ .+-..
T Consensus 417 ~-~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i-------------~~~~~ 482 (535)
T 2h8h_A 417 E-YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV-------------ERGYR 482 (535)
T ss_dssp H-HHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHH-------------HTTCC
T ss_pred c-eecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH-------------HcCCC
Confidence 1 1112234456789999988 6679999999999999999999 99999754321111100 00000
Q ss_pred CCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhC
Q 004994 677 PSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCMI 720 (720)
Q Consensus 677 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~ 720 (720)
. ..+..++.++.+|+.+||+.||++|||+++|++.|++++
T Consensus 483 ~----~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~ 522 (535)
T 2h8h_A 483 M----PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 522 (535)
T ss_dssp C----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSS
T ss_pred C----CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 0 011233467889999999999999999999999999863
No 123
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=9.2e-41 Score=345.47 Aligned_cols=260 Identities=21% Similarity=0.305 Sum_probs=202.6
Q ss_pred hcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEe--ccCCeEEE
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYC--NEHGQHLL 515 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~--~~~~~~~l 515 (720)
.++|...+.||+|+||.||+|.. .+|+.||+|++..........+.+.+|++++++++||||+++++++ ...+..++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 35678889999999999999966 4789999999976544445567899999999999999999999987 44678999
Q ss_pred EEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcC--CCCeeecCCCCCCeEEcCCCCeEEccccCCC
Q 004994 516 VYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVC--EPPIVHGNFKSSNILLDEKLIVRVSDCGLAP 593 (720)
Q Consensus 516 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~--~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~ 593 (720)
||||+++++|.+++.........+++..+..++.++++||+|||+.. ..+|+||||||+||+++.++.+||+|||+++
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~ 164 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR 164 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHH
T ss_pred EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchhe
Confidence 99999999999999754444456899999999999999999999982 1129999999999999999999999999997
Q ss_pred CCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhh
Q 004994 594 LLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALS 672 (720)
Q Consensus 594 ~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (720)
...... .......++..|+|||.. ...++.++||||||+++|||+||+.||....... .... +.
T Consensus 165 ~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~---~~~~----------i~ 229 (279)
T 2w5a_A 165 ILNHDT--SFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKE---LAGK----------IR 229 (279)
T ss_dssp HC---C--HHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHHH----------HH
T ss_pred eecccc--ccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHH---HHHH----------Hh
Confidence 664321 112234578899999998 5578999999999999999999999997543211 1100 00
Q ss_pred hhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 004994 673 RMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLL 717 (720)
Q Consensus 673 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 717 (720)
.-..+.+. ...+.++.+++.+||+.||++|||++|+++++.
T Consensus 230 ~~~~~~~~----~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~ 270 (279)
T 2w5a_A 230 EGKFRRIP----YRYSDELNEIITRMLNLKDYHRPSVEEILENPL 270 (279)
T ss_dssp HTCCCCCC----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTT
T ss_pred hcccccCC----cccCHHHHHHHHHHcCCCcccCCCHHHHHhChh
Confidence 00001111 123357889999999999999999999998764
No 124
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=7.3e-40 Score=338.12 Aligned_cols=247 Identities=26% Similarity=0.322 Sum_probs=179.3
Q ss_pred cCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEeccccc-ccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVS-QRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVY 517 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 517 (720)
++|...+.||+|+||+||+|.. .+|+.||+|++..... .....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEE
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEe
Confidence 5799999999999999999965 5789999999975432 2344568899999999999999999999999999999999
Q ss_pred eeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCC
Q 004994 518 DYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFS 597 (720)
Q Consensus 518 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~ 597 (720)
||+ ++++.+.+.. ...+++..+..++.++++||+|||+. +|+||||||+|||+++++.+||+|||+++....
T Consensus 93 e~~-~~~l~~~~~~----~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 164 (275)
T 2eue_A 93 EYA-GNELFDYIVQ----RDKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD 164 (275)
T ss_dssp ECC-CEEHHHHHHT----SSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCSSCC-----
T ss_pred hhc-CCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCeeccCChHhEEECCCCCEEEeecccceeccC
Confidence 999 5678877753 34589999999999999999999997 899999999999999999999999999986643
Q ss_pred CCCcccccCccccccCCCCccCCC-C-CCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhc
Q 004994 598 GSTNELSEGLLTAHGSGAPEFESG-S-YSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMV 675 (720)
Q Consensus 598 ~~~~~~~~~~~~~~~~~aPE~~~~-~-~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (720)
.. ......++..|+|||...+ . .+.++|||||||++|||++|+.||...........+...
T Consensus 165 ~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~-------------- 227 (275)
T 2eue_A 165 GN---FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNG-------------- 227 (275)
T ss_dssp -------------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT--------------
T ss_pred cc---cccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC--------------
Confidence 22 2233467889999999854 3 378999999999999999999999753321111000000
Q ss_pred CCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 676 DPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 676 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.... +...+..+.+++.+||+.||++|||++|++++
T Consensus 228 ~~~~----~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 263 (275)
T 2eue_A 228 VYTL----PKFLSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp CCCC----CTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred CCCC----CccCCHHHHHHHHHHhhcCHhHCCCHHHHhhC
Confidence 0001 11123568899999999999999999999864
No 125
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=4.8e-41 Score=368.12 Aligned_cols=263 Identities=21% Similarity=0.251 Sum_probs=206.8
Q ss_pred HHHHHHHhcCCCCCCeeccCCCceEEEEEeC-CCcEEEEEEeccccc-ccccHHHHHHHHHHHHccCCCceeEEEeEecc
Q 004994 432 IASLQQYTNSFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVS-QRQTDEEFLELASTISRLRHGNIVELIGYCNE 509 (720)
Q Consensus 432 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~ 509 (720)
..++....++|...++||+|+||+||+|+.. +++.||||++.+... .....+.+.+|.+++..++||||++++++|.+
T Consensus 66 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 145 (437)
T 4aw2_A 66 VKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQD 145 (437)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee
Confidence 4455556788999999999999999999765 589999999975321 12223458899999999999999999999999
Q ss_pred CCeEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccc
Q 004994 510 HGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDC 589 (720)
Q Consensus 510 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DF 589 (720)
.+..++||||+++|+|.+++... ...+++.....++.+++.||.|||+. +||||||||+|||++.++++||+||
T Consensus 146 ~~~~~lV~Ey~~gg~L~~~l~~~---~~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~vkL~DF 219 (437)
T 4aw2_A 146 DNNLYLVMDYYVGGDLLTLLSKF---EDRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADF 219 (437)
T ss_dssp SSEEEEEECCCTTCBHHHHHHTT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCC
T ss_pred CCEEEEEEecCCCCcHHHHHHHc---cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCCEEEcch
Confidence 99999999999999999999642 35689999999999999999999997 9999999999999999999999999
Q ss_pred cCCCCCCCCCCcccccCccccccCCCCccCC------CCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccc-hhhhcc
Q 004994 590 GLAPLLFSGSTNELSEGLLTAHGSGAPEFES------GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQS-LVRWAI 662 (720)
Q Consensus 590 Gla~~~~~~~~~~~~~~~~~~~~~~aPE~~~------~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~-~~~~~~ 662 (720)
|+|+....... .......||++|+|||++. +.|+.++|||||||++|||+||+.||.......... +..+.
T Consensus 220 Gla~~~~~~~~-~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~- 297 (437)
T 4aw2_A 220 GSCLKLMEDGT-VQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHK- 297 (437)
T ss_dssp TTCEECCTTSC-EECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHH-
T ss_pred hhhhhcccCCC-cccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhcc-
Confidence 99976643322 2233457899999999873 458999999999999999999999997543222111 11000
Q ss_pred cccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCC--CCCHHHHHHH
Q 004994 663 PRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGF--RPPMSEIVQD 715 (720)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~--RPt~~evl~~ 715 (720)
.+..-|.. ....++++.+|+.+||..+|++ ||+++|+++|
T Consensus 298 ---------~~~~~p~~----~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~H 339 (437)
T 4aw2_A 298 ---------ERFQFPTQ----VTDVSENAKDLIRRLICSREHRLGQNGIEDFKKH 339 (437)
T ss_dssp ---------HHCCCCSS----CCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred ---------ccccCCcc----cccCCHHHHHHHHHHhcccccccCCCCHHHHhCC
Confidence 00000111 0112357889999999998888 9999999875
No 126
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=8.9e-40 Score=348.43 Aligned_cols=258 Identities=18% Similarity=0.252 Sum_probs=199.5
Q ss_pred cCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEeccccc-ccccHHHHHHHHHHHHcc-CCCceeEEEeEeccCCeEEEE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVS-QRQTDEEFLELASTISRL-RHGNIVELIGYCNEHGQHLLV 516 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv 516 (720)
++|...+.||+|+||+||+|+. .+++.||||++.+... .....+.+.+|.++++++ +||||+++++++.+.+..++|
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv 88 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 88 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence 4678889999999999999976 4689999999975432 233456688999999888 899999999999999999999
Q ss_pred EeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCC
Q 004994 517 YDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLF 596 (720)
Q Consensus 517 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~ 596 (720)
|||+++|+|.+++.. ...+++..+..++.+++.||+|||+. +|+||||||+|||++.++++||+|||+++...
T Consensus 89 ~e~~~gg~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~ 161 (345)
T 3a8x_A 89 IEYVNGGDLMFHMQR----QRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL 161 (345)
T ss_dssp ECCCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCGGGCBCSC
T ss_pred EeCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEecccccccc
Confidence 999999999998853 34689999999999999999999997 99999999999999999999999999998643
Q ss_pred CCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhc
Q 004994 597 SGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMV 675 (720)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (720)
... .......+|+.|+|||.+ ...++.++|||||||++|||++|+.||............ ........+.
T Consensus 162 ~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~-------~~~~~~~~i~ 232 (345)
T 3a8x_A 162 RPG--DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQN-------TEDYLFQVIL 232 (345)
T ss_dssp CTT--CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC--------------CHHHHHHHHH
T ss_pred CCC--CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccc-------cHHHHHHHHH
Confidence 221 223346789999999998 457899999999999999999999999643211100000 0000001111
Q ss_pred CCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCH------HHHHHH
Q 004994 676 DPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPM------SEIVQD 715 (720)
Q Consensus 676 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~------~evl~~ 715 (720)
..... .+...+.++.+++.+||+.||++||++ +|+++|
T Consensus 233 ~~~~~--~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~h 276 (345)
T 3a8x_A 233 EKQIR--IPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 276 (345)
T ss_dssp HCCCC--CCTTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTS
T ss_pred cCCCC--CCCCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcC
Confidence 11100 112234578899999999999999995 677653
No 127
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=3.3e-40 Score=343.13 Aligned_cols=249 Identities=24% Similarity=0.390 Sum_probs=197.7
Q ss_pred hcCCCCCCeeccCCCceEEEEEeC-CC-------cEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccC
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAELP-GG-------KLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEH 510 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g-------~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~ 510 (720)
.++|...+.||+|+||+||+|... ++ ..||+|++... .....+.+.+|++++++++||||+++++++.+.
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 84 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKA--HRNYSESFFEAASMMSKLSHKHLVLNYGVCVCG 84 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGG--GGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCT
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccc--cHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeC
Confidence 356778899999999999999543 34 57999998643 245567899999999999999999999999999
Q ss_pred CeEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCC-------
Q 004994 511 GQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLI------- 583 (720)
Q Consensus 511 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~------- 583 (720)
+..++||||+++|+|.+++... ...+++..+..++.++++||+|||+. +|+||||||+|||++.++.
T Consensus 85 ~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~ 158 (289)
T 4fvq_A 85 DENILVQEFVKFGSLDTYLKKN---KNCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNPP 158 (289)
T ss_dssp TCCEEEEECCTTCBHHHHHHHT---GGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGGGTBCC
T ss_pred CCCEEEEECCCCCCHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCcccccccc
Confidence 9999999999999999999642 34488999999999999999999997 8999999999999998887
Q ss_pred -eEEccccCCCCCCCCCCcccccCccccccCCCCccCC--CCCCCccchHhHHHHHHHHHhCC-CCCCCCCCccccchhh
Q 004994 584 -VRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFES--GSYSCQSDVYSLGVVMLELLTGR-KPYDRSRPRGEQSLVR 659 (720)
Q Consensus 584 -~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~--~~~~~~~Dv~S~Gvvl~elltG~-~Pf~~~~~~~~~~~~~ 659 (720)
+||+|||++...... ....++..|+|||... ..++.++|||||||++|||+||. .||.............
T Consensus 159 ~~kl~Dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~ 232 (289)
T 4fvq_A 159 FIKLSDPGISITVLPK------DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYE 232 (289)
T ss_dssp EEEECCCCSCTTTSCH------HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHH
T ss_pred eeeeccCcccccccCc------cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHhh
Confidence 999999999765321 2245678899999883 56899999999999999999955 4443322111000000
Q ss_pred hcccccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhC
Q 004994 660 WAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCMI 720 (720)
Q Consensus 660 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~ 720 (720)
. ...... ..+.++.+++.+||+.||++|||++|++++|++++
T Consensus 233 ~---------------~~~~~~----~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~ 274 (289)
T 4fvq_A 233 D---------------RHQLPA----PKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLF 274 (289)
T ss_dssp T---------------TCCCCC----CSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC
T ss_pred c---------------cCCCCC----CCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhc
Confidence 0 000000 01235779999999999999999999999999875
No 128
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=3.7e-40 Score=356.34 Aligned_cols=252 Identities=20% Similarity=0.264 Sum_probs=201.7
Q ss_pred hcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEE
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVY 517 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 517 (720)
.+.|...+.||+|+||+||+|.. .+|+.||+|++.... ......+.+|++++++++||||+++++++.+.+..++||
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~--~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~ 127 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPY--PLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLIL 127 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS--HHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEE
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccc--hhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEE
Confidence 45788899999999999999965 578999999987542 234467899999999999999999999999999999999
Q ss_pred eeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcC--CCCeEEccccCCCCC
Q 004994 518 DYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDE--KLIVRVSDCGLAPLL 595 (720)
Q Consensus 518 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~--~~~~kl~DFGla~~~ 595 (720)
||+++|+|.+++... ...+++..+..++.+++.||+|||+. +|+||||||+|||++. ++.+||+|||+++.+
T Consensus 128 E~~~gg~L~~~l~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~ 201 (387)
T 1kob_A 128 EFLSGGELFDRIAAE---DYKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKL 201 (387)
T ss_dssp ECCCCCBHHHHTTCT---TCCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCEEC
T ss_pred EcCCCCcHHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEecccceec
Confidence 999999999998642 34689999999999999999999997 9999999999999974 578999999999876
Q ss_pred CCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhh
Q 004994 596 FSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRM 674 (720)
Q Consensus 596 ~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (720)
.... ......++..|+|||.+ ...++.++|||||||++|||+||+.||...........+..
T Consensus 202 ~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~~-------------- 264 (387)
T 1kob_A 202 NPDE---IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKR-------------- 264 (387)
T ss_dssp CTTS---CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHH--------------
T ss_pred CCCc---ceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHHh--------------
Confidence 4332 22234688999999998 45689999999999999999999999975432111100000
Q ss_pred cCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 675 VDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 675 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.............+.++.+++.+||+.||++|||++|++++
T Consensus 265 ~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 265 CDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp CCCCCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred CCCCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 00001111112234678899999999999999999999875
No 129
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=7.9e-40 Score=337.82 Aligned_cols=255 Identities=22% Similarity=0.273 Sum_probs=203.5
Q ss_pred HhcCCCCCCeeccCCCceEEEEEeC-CCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEE
Q 004994 438 YTNSFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLV 516 (720)
Q Consensus 438 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 516 (720)
+.++|...+.||+|+||.||+|... +++.||||++..... ....+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (276)
T 2yex_A 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLF 83 (276)
T ss_dssp HHHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGC-TTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred eecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccc-hhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEE
Confidence 4467888899999999999999664 789999999864432 23457889999999999999999999999999999999
Q ss_pred EeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCC
Q 004994 517 YDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLF 596 (720)
Q Consensus 517 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~ 596 (720)
|||+++++|.+++.. ...+++..+..++.++++||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 84 ~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~ 156 (276)
T 2yex_A 84 LEYCSGGELFDRIEP----DIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFR 156 (276)
T ss_dssp EECCTTEEGGGGSBT----TTBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECE
T ss_pred EEecCCCcHHHHHhh----ccCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCCCccccC
Confidence 999999999998853 34688999999999999999999997 99999999999999999999999999998664
Q ss_pred CCCCcccccCccccccCCCCccCCC-C-CCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhh
Q 004994 597 SGSTNELSEGLLTAHGSGAPEFESG-S-YSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRM 674 (720)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~aPE~~~~-~-~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (720)
............++..|+|||...+ . ++.++||||||+++|||++|+.||........ ....+...
T Consensus 157 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~~~~~~----------- 224 (276)
T 2yex_A 157 YNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ-EYSDWKEK----------- 224 (276)
T ss_dssp ETTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSH-HHHHHHTT-----------
T ss_pred CCcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHH-HHHHhhhc-----------
Confidence 3332223344567899999999844 4 47799999999999999999999975432211 11111110
Q ss_pred cCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 675 VDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 675 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
..........+..+.+++.+||+.||++|||++|++++
T Consensus 225 ---~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (276)
T 2yex_A 225 ---KTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (276)
T ss_dssp ---CTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred ---ccccCchhhcCHHHHHHHHHHCCCCchhCCCHHHHhcC
Confidence 00000111234578899999999999999999999864
No 130
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.9e-40 Score=347.66 Aligned_cols=256 Identities=26% Similarity=0.397 Sum_probs=196.7
Q ss_pred cCCCCCCeeccCCCceEEEEEeCC-----CcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAELPG-----GKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHL 514 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~~~-----g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~ 514 (720)
++|...+.||+|+||+||+|.... +..||||++.... .......+.+|++++++++||||+++++++.+.+..+
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 122 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY-TEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMM 122 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEE
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCC-CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcE
Confidence 456667899999999999996532 3469999997543 2344567899999999999999999999999999999
Q ss_pred EEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCC
Q 004994 515 LVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPL 594 (720)
Q Consensus 515 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~ 594 (720)
+||||+++|+|.+++.. ....+++..+..++.++++||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 123 lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~ 196 (333)
T 1mqb_A 123 IITEYMENGALDKFLRE---KDGEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSRV 196 (333)
T ss_dssp EEEECCTTEEHHHHHHH---TTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC---
T ss_pred EEEeCCCCCcHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECCCCcchh
Confidence 99999999999999853 235689999999999999999999997 999999999999999999999999999987
Q ss_pred CCCCCCcc-cccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcccccCchhhh
Q 004994 595 LFSGSTNE-LSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDAL 671 (720)
Q Consensus 595 ~~~~~~~~-~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (720)
........ ......++..|+|||.. ...++.++|||||||++|||+| |+.||....... ...
T Consensus 197 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~---~~~------------ 261 (333)
T 1mqb_A 197 LEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHE---VMK------------ 261 (333)
T ss_dssp --------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH---HHH------------
T ss_pred hccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHH---HHH------------
Confidence 64332111 11223346789999998 5679999999999999999999 999996533211 111
Q ss_pred hhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 672 SRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 672 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
.+.+. .....+...+.++.+++.+||+.||++||++.|+++.|+++
T Consensus 262 -~~~~~-~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~ 307 (333)
T 1mqb_A 262 -AINDG-FRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKL 307 (333)
T ss_dssp -HHHTT-CCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred -HHHCC-CcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 00000 00001112346788999999999999999999999999876
No 131
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=2.4e-40 Score=365.98 Aligned_cols=249 Identities=22% Similarity=0.284 Sum_probs=192.3
Q ss_pred cCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccc-cccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTV-SQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVY 517 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~-~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 517 (720)
++|...+.||+|+||+||+|.. .+|+.||||++.+.. ........+.+|+++++.++||||++++++|.+.+..++||
T Consensus 148 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~ 227 (446)
T 4ejn_A 148 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVM 227 (446)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEEE
T ss_pred HHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEEE
Confidence 5688889999999999999965 579999999997542 22334467788999999999999999999999999999999
Q ss_pred eeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHh-cCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCC
Q 004994 518 DYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQE-VCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLF 596 (720)
Q Consensus 518 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~-~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~ 596 (720)
||+++|+|.+++.. ...+++..+..++.++++||+|||+ . +||||||||+|||++.++.+||+|||+|+...
T Consensus 228 e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 300 (446)
T 4ejn_A 228 EYANGGELFFHLSR----ERVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEGI 300 (446)
T ss_dssp CCCSSCBHHHHHHH----HSCCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECCCCCCCTTC
T ss_pred eeCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEccCCCceecc
Confidence 99999999998853 3568999999999999999999997 5 89999999999999999999999999998643
Q ss_pred CCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhc
Q 004994 597 SGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMV 675 (720)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (720)
... .......||++|+|||.+ ...|+.++|||||||++|||++|+.||...........+...
T Consensus 301 ~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~-------------- 364 (446)
T 4ejn_A 301 KDG--ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME-------------- 364 (446)
T ss_dssp C-------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC--------------
T ss_pred CCC--cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHHhC--------------
Confidence 222 223346789999999998 667999999999999999999999999654321111111000
Q ss_pred CCCCCchhhHHHHHHHHHHHHHHhccCCCCCC-----CHHHHHHH
Q 004994 676 DPSLDGAYLAKSLSRFADIISRCVQWEPGFRP-----PMSEIVQD 715 (720)
Q Consensus 676 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~evl~~ 715 (720)
... ++...+.++.+++.+||+.||.+|| +++|+++|
T Consensus 365 ~~~----~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~h 405 (446)
T 4ejn_A 365 EIR----FPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQH 405 (446)
T ss_dssp CCC----CCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred CCC----CCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhC
Confidence 000 1112235788999999999999999 99999874
No 132
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=2.5e-40 Score=350.60 Aligned_cols=271 Identities=22% Similarity=0.255 Sum_probs=206.8
Q ss_pred cCCCCCCeeccCCCceEEEEEe-----CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEec--cCCe
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL-----PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCN--EHGQ 512 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~-----~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~--~~~~ 512 (720)
++|...+.||+|+||.||+|.+ .+++.||||++... .....+.+.+|++++++++||||+++++++. +...
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 100 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS--GPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQS 100 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSC--CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCE
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccC--CHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCce
Confidence 5677889999999999999974 46889999999754 2344567999999999999999999999886 4567
Q ss_pred EEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCC
Q 004994 513 HLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLA 592 (720)
Q Consensus 513 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla 592 (720)
.++||||+++++|.+++... ...+++..+..++.++++||+|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 101 ~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~ 174 (327)
T 3lxl_A 101 LRLVMEYLPSGCLRDFLQRH---RARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLA 174 (327)
T ss_dssp EEEEEECCTTCBHHHHHHHH---GGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCGGGC
T ss_pred EEEEEeecCCCCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEcccccc
Confidence 89999999999999999632 34689999999999999999999997 9999999999999999999999999999
Q ss_pred CCCCCCCCc-ccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhh
Q 004994 593 PLLFSGSTN-ELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDA 670 (720)
Q Consensus 593 ~~~~~~~~~-~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~ 670 (720)
+........ .......++..|+|||.. ...++.++|||||||++|||++|+.||......... ...+ .........
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~-~~~~-~~~~~~~~~ 252 (327)
T 3lxl_A 175 KLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLR-MMGC-ERDVPALSR 252 (327)
T ss_dssp EECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHH-HCC-----CCHHHH
T ss_pred eecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhh-hccc-ccccccHHH
Confidence 876443221 122334567789999988 556899999999999999999999998542211000 0000 000111111
Q ss_pred hhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhC
Q 004994 671 LSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCMI 720 (720)
Q Consensus 671 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~ 720 (720)
+.+.+........+...++++.+++.+||+.||++|||++|++++|++++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~ 302 (327)
T 3lxl_A 253 LLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLW 302 (327)
T ss_dssp HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC-
T ss_pred HHHHhhcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 11111111111222334567899999999999999999999999999763
No 133
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=5.4e-40 Score=376.94 Aligned_cols=249 Identities=24% Similarity=0.338 Sum_probs=197.7
Q ss_pred CeeccCCCceEEEEEe---CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEeeCCC
Q 004994 446 NFIGEGLLGSVYKAEL---PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDYGGN 522 (720)
Q Consensus 446 ~~lg~G~~g~Vy~~~~---~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 522 (720)
+.||+|+||+||+|.+ .+++.||||+++.........++|.+|++++++++|||||+++++|.+ +..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 4799999999999954 346899999998665555567889999999999999999999999965 458899999999
Q ss_pred CCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCCCc-
Q 004994 523 CTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTN- 601 (720)
Q Consensus 523 gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~- 601 (720)
|+|.+++.. ...+++..+..++.+++.||+|||+. +||||||||+|||++.++.+||+|||+|+.+......
T Consensus 454 g~L~~~l~~----~~~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 526 (635)
T 4fl3_A 454 GPLNKYLQQ----NRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 526 (635)
T ss_dssp EEHHHHHHH----CTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-----
T ss_pred CCHHHHHhh----CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCccccccCcccc
Confidence 999999953 35689999999999999999999997 9999999999999999999999999999876443221
Q ss_pred ccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcccccCchhhhhhhcCCCC
Q 004994 602 ELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSL 679 (720)
Q Consensus 602 ~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (720)
.......++..|+|||.+ ...++.++|||||||++|||+| |+.||...........+ ....
T Consensus 527 ~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i-----------------~~~~ 589 (635)
T 4fl3_A 527 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAML-----------------EKGE 589 (635)
T ss_dssp --------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHH-----------------HTTC
T ss_pred ccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH-----------------HcCC
Confidence 112223456789999998 5679999999999999999998 99999754322111111 0000
Q ss_pred CchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 680 DGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 680 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
....+..++.++.+++.+||+.||++|||+++|++.|+++
T Consensus 590 ~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~ 629 (635)
T 4fl3_A 590 RMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNY 629 (635)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence 1111223446789999999999999999999999999875
No 134
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=2.6e-40 Score=344.04 Aligned_cols=256 Identities=23% Similarity=0.341 Sum_probs=189.2
Q ss_pred hcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEE
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVY 517 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 517 (720)
.++|+..+.||+|+||+||+|.. .+|+.||||++..........+.+.++...++.++||||+++++++.+.+..++||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 85 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 85 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence 45788889999999999999965 57999999999765443444455566666788899999999999999999999999
Q ss_pred eeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCC
Q 004994 518 DYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFS 597 (720)
Q Consensus 518 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~ 597 (720)
||+++ +|.+++.........+++..+..++.+++.||+|||+. .+|+||||||+||+++.++.+||+|||+++....
T Consensus 86 e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~--~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 162 (290)
T 3fme_A 86 ELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK--LSVIHRDVKPSNVLINALGQVKMCDFGISGYLVD 162 (290)
T ss_dssp ECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH--SCCCCCCCSGGGCEECTTCCEEBCCC--------
T ss_pred ehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhc--CCeecCCCCHHHEEECCCCCEEEeecCCcccccc
Confidence 99984 88888765444456799999999999999999999984 2899999999999999999999999999987643
Q ss_pred CCCcccccCccccccCCCCccC-----CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhh
Q 004994 598 GSTNELSEGLLTAHGSGAPEFE-----SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALS 672 (720)
Q Consensus 598 ~~~~~~~~~~~~~~~~~aPE~~-----~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (720)
.. ......++..|+|||.+ ...++.++|||||||++|||+||+.||........ . +.
T Consensus 163 ~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~--------------~~ 224 (290)
T 3fme_A 163 DV---AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQ-Q--------------LK 224 (290)
T ss_dssp ----------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHH-H--------------HH
T ss_pred cc---cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHH-H--------------HH
Confidence 22 12234678899999984 34588999999999999999999999964321110 0 00
Q ss_pred hhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 673 RMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 673 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
...............+.++.+++.+||+.||++|||++|++++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~h 267 (290)
T 3fme_A 225 QVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQH 267 (290)
T ss_dssp HHHHSCCCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred HHhccCCCCcccccCCHHHHHHHHHHhhcChhhCcCHHHHHhC
Confidence 0110000000111234578899999999999999999999874
No 135
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=5.1e-40 Score=342.25 Aligned_cols=255 Identities=24% Similarity=0.326 Sum_probs=198.9
Q ss_pred cCCCCCC-eeccCCCceEEEEEe---CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEE
Q 004994 440 NSFSEGN-FIGEGLLGSVYKAEL---PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLL 515 (720)
Q Consensus 440 ~~~~~~~-~lg~G~~g~Vy~~~~---~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~l 515 (720)
++|...+ .||+|+||+||+|.. .+++.||||++..........+++.+|+++++.++||||+++++++ +.+..++
T Consensus 16 ~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~l 94 (291)
T 1xbb_A 16 KLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWML 94 (291)
T ss_dssp GGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEE
T ss_pred hhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEE
Confidence 4556566 899999999999953 3478999999976544444567899999999999999999999999 5567899
Q ss_pred EEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCC
Q 004994 516 VYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLL 595 (720)
Q Consensus 516 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~ 595 (720)
||||+++++|.+++.. ...+++..+..++.++++||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 95 v~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~ 167 (291)
T 1xbb_A 95 VMEMAELGPLNKYLQQ----NRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKAL 167 (291)
T ss_dssp EEECCTTEEHHHHHHH----CTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred EEEeCCCCCHHHHHHh----CcCCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEccCCcceee
Confidence 9999999999999953 34588999999999999999999997 9999999999999999999999999999876
Q ss_pred CCCCCcc-cccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcccccCchhhhh
Q 004994 596 FSGSTNE-LSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALS 672 (720)
Q Consensus 596 ~~~~~~~-~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (720)
....... ......++..|+|||.. ...++.++||||||+++|||+| |+.||...........+ .
T Consensus 168 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~-------------~ 234 (291)
T 1xbb_A 168 RADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAML-------------E 234 (291)
T ss_dssp CTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHH-------------H
T ss_pred ccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH-------------H
Confidence 4432211 11123346789999998 5568899999999999999999 99999754321111100 0
Q ss_pred hhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 673 RMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 673 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
....+. .+...+.++.+++.+||+.||++|||+.|+++.|+++
T Consensus 235 ~~~~~~----~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~ 277 (291)
T 1xbb_A 235 KGERMG----CPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNY 277 (291)
T ss_dssp TTCCCC----CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred cCCCCC----CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 000011 1122346788999999999999999999999999986
No 136
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=4.4e-40 Score=354.64 Aligned_cols=246 Identities=21% Similarity=0.252 Sum_probs=192.5
Q ss_pred CCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEeeCCCC
Q 004994 445 GNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDYGGNC 523 (720)
Q Consensus 445 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~g 523 (720)
.+.||+|+||.||+|.. .+|+.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++||||++++
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~ 171 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRG--MKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGG 171 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCS--HHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTC
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccc--cccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCC
Confidence 56799999999999965 579999999997532 244578999999999999999999999999999999999999999
Q ss_pred CHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEE--cCCCCeEEccccCCCCCCCCCCc
Q 004994 524 TLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILL--DEKLIVRVSDCGLAPLLFSGSTN 601 (720)
Q Consensus 524 sL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl--~~~~~~kl~DFGla~~~~~~~~~ 601 (720)
+|.+++.. ....+++..+..++.|+++||+|||+. +|+||||||+|||+ +.++.+||+|||+++.+.....
T Consensus 172 ~L~~~l~~---~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~- 244 (373)
T 2x4f_A 172 ELFDRIID---ESYNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK- 244 (373)
T ss_dssp EEHHHHHH---TGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCB-
T ss_pred cHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccc-
Confidence 99998853 234688999999999999999999997 89999999999999 5678999999999987643322
Q ss_pred ccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcCCCCC
Q 004994 602 ELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLD 680 (720)
Q Consensus 602 ~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (720)
.....++++|+|||.+ .+.++.++|||||||++|||+||+.||...........+. .. .....
T Consensus 245 --~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~------------~~--~~~~~ 308 (373)
T 2x4f_A 245 --LKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNIL------------AC--RWDLE 308 (373)
T ss_dssp --CCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHH------------HT--CCCSC
T ss_pred --cccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH------------hc--cCCCC
Confidence 2234688999999988 4568999999999999999999999997543221110000 00 00011
Q ss_pred chhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 681 GAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 681 ~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.......++++.+|+.+||+.||++|||++|++++
T Consensus 309 ~~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~h 343 (373)
T 2x4f_A 309 DEEFQDISEEAKEFISKLLIKEKSWRISASEALKH 343 (373)
T ss_dssp SGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred hhhhccCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 11112234678899999999999999999999974
No 137
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=4.7e-40 Score=341.39 Aligned_cols=249 Identities=19% Similarity=0.277 Sum_probs=201.0
Q ss_pred HhcCCCCCCeeccCCCceEEEEEeC-CCcEEEEEEecccccccccHHHHHHHHHHHHcc-CCCceeEEEeEeccCCeEEE
Q 004994 438 YTNSFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQRQTDEEFLELASTISRL-RHGNIVELIGYCNEHGQHLL 515 (720)
Q Consensus 438 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~l 515 (720)
+.++|...+.||+|+||+||+|... +++.||||++...........++.+|+..+.++ +||||+++++++.+.+..++
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~l 88 (289)
T 1x8b_A 9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLI 88 (289)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEE
T ss_pred ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEE
Confidence 4567888999999999999999664 799999999986554455667888999999999 99999999999999999999
Q ss_pred EEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcC---------------
Q 004994 516 VYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDE--------------- 580 (720)
Q Consensus 516 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~--------------- 580 (720)
||||+++++|.+++.........+++..+..++.|+++||+|||+. +|+||||||+|||++.
T Consensus 89 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~ 165 (289)
T 1x8b_A 89 QNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDEDD 165 (289)
T ss_dssp EEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC----------------
T ss_pred EEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCccccccccccc
Confidence 9999999999999975444446789999999999999999999997 9999999999999984
Q ss_pred ----CCCeEEccccCCCCCCCCCCcccccCccccccCCCCccCCC--CCCCccchHhHHHHHHHHHhCCCCCCCCCCccc
Q 004994 581 ----KLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFESG--SYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGE 654 (720)
Q Consensus 581 ----~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~--~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~ 654 (720)
...+||+|||++....... ...++..|+|||...+ .++.++|||||||++|||++|+.|+.....
T Consensus 166 ~~~~~~~~kl~Dfg~~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~--- 236 (289)
T 1x8b_A 166 WASNKVMFKIGDLGHVTRISSPQ------VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQ--- 236 (289)
T ss_dssp ----CCCEEECCCTTCEETTCSC------CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHH---
T ss_pred ccCCceEEEEcccccccccCCcc------ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhH---
Confidence 4489999999998764322 2347889999999844 456799999999999999999977643210
Q ss_pred cchhhhcccccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 655 QSLVRWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 655 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
... +.....+... ...+.++.+++.+||+.||++|||++|++++
T Consensus 237 --~~~-----------~~~~~~~~~~----~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 280 (289)
T 1x8b_A 237 --WHE-----------IRQGRLPRIP----QVLSQEFTELLKVMIHPDPERRPSAMALVKH 280 (289)
T ss_dssp --HHH-----------HHTTCCCCCS----SCCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred --HHH-----------HHcCCCCCCC----cccCHHHHHHHHHHhCCCcccCCCHHHHhhC
Confidence 000 0000011111 1223578899999999999999999999875
No 138
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=1.2e-39 Score=344.53 Aligned_cols=253 Identities=21% Similarity=0.277 Sum_probs=203.6
Q ss_pred hcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEeccccccc----ccHHHHHHHHHHHHccCCCceeEEEeEeccCCeE
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQR----QTDEEFLELASTISRLRHGNIVELIGYCNEHGQH 513 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~ 513 (720)
.+.|...+.||+|+||.||+|.. .+|+.||||++....... ...+.+.+|++++++++||||+++++++.+.+..
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 45688889999999999999965 468999999997543221 2467899999999999999999999999999999
Q ss_pred EEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCC----CeEEccc
Q 004994 514 LLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKL----IVRVSDC 589 (720)
Q Consensus 514 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~----~~kl~DF 589 (720)
++||||+++++|.+++.. ...+++..+..++.++++||+|||+. +|+||||||+|||++.++ .+||+||
T Consensus 91 ~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~~~kl~Df 163 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQ----KESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDF 163 (321)
T ss_dssp EEEECCCCSCBHHHHHHT----CSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCC
T ss_pred EEEEEcCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcCCEEEccC
Confidence 999999999999999953 34688999999999999999999997 999999999999999888 7999999
Q ss_pred cCCCCCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCch
Q 004994 590 GLAPLLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDI 668 (720)
Q Consensus 590 Gla~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~ 668 (720)
|+++...... ......++..|+|||.. ...++.++|||||||++|||+||+.||...........+..
T Consensus 164 g~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~-------- 232 (321)
T 2a2a_A 164 GLAHEIEDGV---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITS-------- 232 (321)
T ss_dssp TTCEECCTTC---CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHT--------
T ss_pred ccceecCccc---cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHh--------
Confidence 9998764332 12335688999999998 45789999999999999999999999965332111100000
Q ss_pred hhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 669 DALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 669 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.............+..+.+++.+||+.||++|||++|++++
T Consensus 233 ------~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~h 273 (321)
T 2a2a_A 233 ------VSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRH 273 (321)
T ss_dssp ------TCCCCCHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHS
T ss_pred ------cccccChhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 00111111122334678899999999999999999999975
No 139
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=1.8e-39 Score=355.71 Aligned_cols=255 Identities=20% Similarity=0.261 Sum_probs=192.7
Q ss_pred HHhcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccc------cccHHHHHHHHHHHHccCCCceeEEEeEecc
Q 004994 437 QYTNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQ------RQTDEEFLELASTISRLRHGNIVELIGYCNE 509 (720)
Q Consensus 437 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~------~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~ 509 (720)
...++|...+.||+|+||+||+|.. .+++.||||++.+.... ......+.+|++++++++||||+++++++..
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~ 211 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA 211 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec
Confidence 4567899999999999999999955 56899999998754211 1122357899999999999999999999854
Q ss_pred CCeEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCC---CCeEE
Q 004994 510 HGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEK---LIVRV 586 (720)
Q Consensus 510 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~---~~~kl 586 (720)
+..++||||+++|+|.+++.. ...+++.....++.|+++||+|||+. +|+||||||+|||++.+ +.+||
T Consensus 212 -~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kl 283 (419)
T 3i6u_A 212 -EDYYIVLELMEGGELFDKVVG----NKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKI 283 (419)
T ss_dssp -SEEEEEEECCTTCBGGGGTSS----SCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSSSCCEEE
T ss_pred -CceEEEEEcCCCCcHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCCcceEEE
Confidence 458999999999999998853 34689999999999999999999987 89999999999999754 45999
Q ss_pred ccccCCCCCCCCCCcccccCccccccCCCCccCC----CCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcc
Q 004994 587 SDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFES----GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAI 662 (720)
Q Consensus 587 ~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~----~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~ 662 (720)
+|||+|+..... .......++++|+|||++. ..++.++|||||||++|||+||+.||........ .....
T Consensus 284 ~DFG~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~--~~~~i- 357 (419)
T 3i6u_A 284 TDFGHSKILGET---SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS--LKDQI- 357 (419)
T ss_dssp CCSSTTTSCC--------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCC--HHHHH-
T ss_pred eecccceecCCC---ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHH--HHHHH-
Confidence 999999876432 2233466899999999873 4688899999999999999999999975332211 00000
Q ss_pred cccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 663 PRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.. .............++++.+++.+||+.||++|||++|++++
T Consensus 358 ---------~~-~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 400 (419)
T 3i6u_A 358 ---------TS-GKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 400 (419)
T ss_dssp ---------HT-TCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred ---------hc-CCCCCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence 00 00001111122334678899999999999999999999975
No 140
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=6.6e-40 Score=367.22 Aligned_cols=254 Identities=20% Similarity=0.288 Sum_probs=199.8
Q ss_pred HhcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEE
Q 004994 438 YTNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLV 516 (720)
Q Consensus 438 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 516 (720)
+.+.|...+.||+|+||+||+|.. .++..||||++.+..........+.+|+++++.++|||||+++++|.+.+..++|
T Consensus 35 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 114 (494)
T 3lij_A 35 LSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLV 114 (494)
T ss_dssp HHHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 345688889999999999999966 4789999999986544444567889999999999999999999999999999999
Q ss_pred EeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcC---CCCeEEccccCCC
Q 004994 517 YDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDE---KLIVRVSDCGLAP 593 (720)
Q Consensus 517 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~---~~~~kl~DFGla~ 593 (720)
|||+++|+|.+.+.. ...+++..+..++.++++||+|||+. +||||||||+|||++. ++.+||+|||+++
T Consensus 115 ~e~~~~g~L~~~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~ 187 (494)
T 3lij_A 115 MECYKGGELFDEIIH----RMKFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSA 187 (494)
T ss_dssp EECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCE
T ss_pred EecCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEEECCCCe
Confidence 999999999988853 35688999999999999999999997 9999999999999976 4559999999998
Q ss_pred CCCCCCCcccccCccccccCCCCccCCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhh
Q 004994 594 LLFSGSTNELSEGLLTAHGSGAPEFESGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSR 673 (720)
Q Consensus 594 ~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (720)
...... ......++++|+|||.+.+.|+.++|||||||++|||++|+.||...........+....
T Consensus 188 ~~~~~~---~~~~~~gt~~y~aPE~l~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~----------- 253 (494)
T 3lij_A 188 VFENQK---KMKERLGTAYYIAPEVLRKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGK----------- 253 (494)
T ss_dssp ECBTTB---CBCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC-----------
T ss_pred ECCCCc---cccccCCCcCeeCHHHHcccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC-----------
Confidence 764322 223456899999999998889999999999999999999999997543221111111000
Q ss_pred hcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 674 MVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 674 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
...........+.++.+++.+||+.||.+|||++|++++
T Consensus 254 ---~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 292 (494)
T 3lij_A 254 ---YTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEH 292 (494)
T ss_dssp ---CCCCSGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred ---CCCCchhcccCCHHHHHHHHHHCCCChhhCccHHHHhcC
Confidence 000111112234678899999999999999999999865
No 141
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=5.3e-40 Score=348.18 Aligned_cols=257 Identities=24% Similarity=0.352 Sum_probs=199.9
Q ss_pred cCCCCCCeeccCCCceEEEEEe-CCCcEE--EEEEecccccccccHHHHHHHHHHHHcc-CCCceeEEEeEeccCCeEEE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL-PGGKLL--AVKKLSNTVSQRQTDEEFLELASTISRL-RHGNIVELIGYCNEHGQHLL 515 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~v--avK~l~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~l 515 (720)
++|...+.||+|+||.||+|.. .++..+ |+|++.... .....+.+.+|+++++++ +||||+++++++.+.+..++
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l 103 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA-SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL 103 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC-------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeecccc-chHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEE
Confidence 5678889999999999999965 456654 999987432 234456789999999999 99999999999999999999
Q ss_pred EEeeCCCCCHHHHhhccc------------hhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCC
Q 004994 516 VYDYGGNCTLHDLLHSDE------------EAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLI 583 (720)
Q Consensus 516 v~e~~~~gsL~~~l~~~~------------~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~ 583 (720)
||||+++|+|.+++.... .....+++..+..++.++++||+|||+. +|+||||||+|||++.++.
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~ 180 (327)
T 1fvr_A 104 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYV 180 (327)
T ss_dssp EECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGC
T ss_pred EEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEEcCCCe
Confidence 999999999999997543 1234689999999999999999999997 9999999999999999999
Q ss_pred eEEccccCCCCCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhc
Q 004994 584 VRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWA 661 (720)
Q Consensus 584 ~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~ 661 (720)
+||+|||+++..... .......++..|+|||.. ...++.++|||||||++|||+| |+.||........ ....
T Consensus 181 ~kL~Dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~---~~~~ 254 (327)
T 1fvr_A 181 AKIADFGLSRGQEVY---VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAEL---YEKL 254 (327)
T ss_dssp EEECCTTCEESSCEE---CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH---HHHG
T ss_pred EEEcccCcCcccccc---ccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHH---HHHh
Confidence 999999998754221 111223456789999988 4568999999999999999998 9999975432111 1100
Q ss_pred ccccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhC
Q 004994 662 IPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCMI 720 (720)
Q Consensus 662 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~ 720 (720)
....... .+...+.++.+++.+||+.||++|||++|++++|++++
T Consensus 255 ----------~~~~~~~----~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 299 (327)
T 1fvr_A 255 ----------PQGYRLE----KPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 299 (327)
T ss_dssp ----------GGTCCCC----CCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ----------hcCCCCC----CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 0000011 11123357889999999999999999999999998863
No 142
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6.1e-40 Score=340.94 Aligned_cols=254 Identities=23% Similarity=0.330 Sum_probs=201.6
Q ss_pred CCCCCC-eeccCCCceEEEEEeC---CCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEE
Q 004994 441 SFSEGN-FIGEGLLGSVYKAELP---GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLV 516 (720)
Q Consensus 441 ~~~~~~-~lg~G~~g~Vy~~~~~---~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 516 (720)
+|...+ .||+|+||.||+|... ++..||||++.... .....+.+.+|++++++++||||+++++++ +.+..++|
T Consensus 10 ~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv 87 (287)
T 1u59_A 10 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT-EKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLV 87 (287)
T ss_dssp GEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSC-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEE
T ss_pred HhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCcc-chhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEE
Confidence 344444 8999999999999653 57889999997542 234567899999999999999999999999 45568999
Q ss_pred EeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCC
Q 004994 517 YDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLF 596 (720)
Q Consensus 517 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~ 596 (720)
|||+++++|.+++... ...+++..+..++.++++||.|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 88 ~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~ 161 (287)
T 1u59_A 88 MEMAGGGPLHKFLVGK---REEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALG 161 (287)
T ss_dssp EECCTTEEHHHHHTTC---TTTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCEECT
T ss_pred EEeCCCCCHHHHHHhC---CccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECcccceeeec
Confidence 9999999999998632 34689999999999999999999997 99999999999999999999999999998764
Q ss_pred CCCCc-ccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcccccCchhhhhh
Q 004994 597 SGSTN-ELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSR 673 (720)
Q Consensus 597 ~~~~~-~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (720)
..... .......++..|+|||.. ...++.++||||||+++|||+| |+.||...........+ ..
T Consensus 162 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i-------------~~ 228 (287)
T 1u59_A 162 ADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFI-------------EQ 228 (287)
T ss_dssp TCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHH-------------HT
T ss_pred cCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHH-------------hc
Confidence 33221 112233457889999998 4678999999999999999999 99999754322111100 00
Q ss_pred hcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 674 MVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 674 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
...+. .+...+.++.+++.+||+.||++||++.|++++|+++
T Consensus 229 ~~~~~----~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~ 270 (287)
T 1u59_A 229 GKRME----CPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRAC 270 (287)
T ss_dssp TCCCC----CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCcCC----CCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 00011 1123346788999999999999999999999999986
No 143
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=1.4e-40 Score=352.82 Aligned_cols=268 Identities=18% Similarity=0.253 Sum_probs=192.7
Q ss_pred HhcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEE
Q 004994 438 YTNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLV 516 (720)
Q Consensus 438 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 516 (720)
..++|...+.||+|+||+||+|.. .+++.||||++..........+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 111 (329)
T 3gbz_A 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLI 111 (329)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEE
T ss_pred chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEE
Confidence 456788999999999999999964 5799999999976544444556788999999999999999999999999999999
Q ss_pred EeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEE-----cCCCCeEEccccC
Q 004994 517 YDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILL-----DEKLIVRVSDCGL 591 (720)
Q Consensus 517 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl-----~~~~~~kl~DFGl 591 (720)
|||+++ +|.+++.. ...+++..+..++.++++||+|||+. +|+||||||+|||+ +.++.+||+|||+
T Consensus 112 ~e~~~~-~L~~~~~~----~~~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~ 183 (329)
T 3gbz_A 112 FEYAEN-DLKKYMDK----NPDVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGL 183 (329)
T ss_dssp EECCSE-EHHHHHHH----CTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCEEEECCTTH
T ss_pred EecCCC-CHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccceEEECcCCC
Confidence 999985 99998853 34588999999999999999999997 99999999999999 4555699999999
Q ss_pred CCCCCCCCCcccccCccccccCCCCccCCC--CCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhc--ccc---
Q 004994 592 APLLFSGSTNELSEGLLTAHGSGAPEFESG--SYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWA--IPR--- 664 (720)
Q Consensus 592 a~~~~~~~~~~~~~~~~~~~~~~aPE~~~~--~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~--~~~--- 664 (720)
++...... .......++..|+|||.+.+ .++.++|||||||++|||++|+.||...........+... .+.
T Consensus 184 a~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 261 (329)
T 3gbz_A 184 ARAFGIPI--RQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTT 261 (329)
T ss_dssp HHHHC-------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTT
T ss_pred ccccCCcc--cccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhh
Confidence 97653221 12233456889999998843 5899999999999999999999999764322111100000 000
Q ss_pred cCchhhhhhh-------cCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 665 LHDIDALSRM-------VDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 665 ~~~~~~~~~~-------~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.........+ ....+..........++.+|+.+||+.||++|||++|++++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 319 (329)
T 3gbz_A 262 WPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEH 319 (329)
T ss_dssp STTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred hhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCC
Confidence 0000000000 00000111112234678899999999999999999999874
No 144
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=8.9e-40 Score=338.23 Aligned_cols=248 Identities=24% Similarity=0.348 Sum_probs=198.2
Q ss_pred hcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccc-cccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEE
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTV-SQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLV 516 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~-~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 516 (720)
.++|...+.||+|+||+||+|.. .+++.||||++.... ......+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 87 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 87 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence 45788889999999999999965 467899999986432 1223456789999999999999999999999999999999
Q ss_pred EeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCC
Q 004994 517 YDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLF 596 (720)
Q Consensus 517 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~ 596 (720)
|||+++++|.+++.. ...+++..+..++.+++.||.|||+. +|+||||||+|||++.++.+||+|||++....
T Consensus 88 ~e~~~~~~l~~~l~~----~~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~ 160 (279)
T 3fdn_A 88 LEYAPLGTVYRELQK----LSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP 160 (279)
T ss_dssp ECCCTTEEHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECSCCEESCC-
T ss_pred EecCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEeccccccCC
Confidence 999999999998853 35688999999999999999999987 99999999999999999999999999986553
Q ss_pred CCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhc
Q 004994 597 SGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMV 675 (720)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (720)
... .....++..|+|||.. ...++.++||||||+++|||++|+.||...........+.. .
T Consensus 161 ~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~--------------~ 222 (279)
T 3fdn_A 161 SSR----RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR--------------V 222 (279)
T ss_dssp -----------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHH--------------T
T ss_pred ccc----ccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHHh--------------C
Confidence 221 2235678899999988 45688999999999999999999999975332111111100 0
Q ss_pred CCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 676 DPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 676 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.... +...+..+.+++.+||+.||++|||++|++++
T Consensus 223 ~~~~----~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 223 EFTF----PDFVTEGARDLISRLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp CCCC----CTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred CCCC----CCcCCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 1111 11123567899999999999999999999976
No 145
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=1.3e-39 Score=360.51 Aligned_cols=248 Identities=21% Similarity=0.328 Sum_probs=201.6
Q ss_pred cCCCCCCeeccCCCceEEEEEeC-CCcEEEEEEeccccc-ccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVS-QRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVY 517 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 517 (720)
++|...+.||+|+||+||+|... +|+.||||++.+... .....+.+.+|+++++.++||||+++++++.+.+..++||
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 95 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVM 95 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 56888899999999999999764 799999999975322 2234567899999999999999999999999999999999
Q ss_pred eeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCC
Q 004994 518 DYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFS 597 (720)
Q Consensus 518 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~ 597 (720)
||+++|+|.+++.. ...+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 96 E~~~gg~L~~~l~~----~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~ 168 (476)
T 2y94_A 96 EYVSGGELFDYICK----NGRLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD 168 (476)
T ss_dssp ECCSSEEHHHHTTS----SSSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCCSSCEECCT
T ss_pred eCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEeccchhhccc
Confidence 99999999999853 34689999999999999999999987 999999999999999999999999999987643
Q ss_pred CCCcccccCccccccCCCCccCCC-CC-CCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhc
Q 004994 598 GSTNELSEGLLTAHGSGAPEFESG-SY-SCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMV 675 (720)
Q Consensus 598 ~~~~~~~~~~~~~~~~~aPE~~~~-~~-~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (720)
.. ......+++.|+|||.+.+ .+ +.++|||||||++|||++|+.||........ ...+.
T Consensus 169 ~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~----------------~~~i~ 229 (476)
T 2y94_A 169 GE---FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTL----------------FKKIC 229 (476)
T ss_dssp TC---CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHH----------------HHHHH
T ss_pred cc---cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHH----------------HHHHh
Confidence 32 2234568899999999854 33 7899999999999999999999975432111 11111
Q ss_pred CCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 676 DPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 676 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
+.... .+...+.++.+++.+||+.||++|||++|++++
T Consensus 230 ~~~~~--~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~h 267 (476)
T 2y94_A 230 DGIFY--TPQYLNPSVISLLKHMLQVDPMKRATIKDIREH 267 (476)
T ss_dssp TTCCC--CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred cCCcC--CCccCCHHHHHHHHHHcCCCchhCcCHHHHHhC
Confidence 11100 011123568899999999999999999999974
No 146
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=9.5e-40 Score=374.00 Aligned_cols=248 Identities=24% Similarity=0.336 Sum_probs=196.2
Q ss_pred eeccCCCceEEEEEeC---CCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEeeCCCC
Q 004994 447 FIGEGLLGSVYKAELP---GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDYGGNC 523 (720)
Q Consensus 447 ~lg~G~~g~Vy~~~~~---~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~g 523 (720)
.||+|+||+||+|.+. ++..||||+++... .....++|.+|++++++++|||||+++++|.+ +..++||||+++|
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g 420 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT-EKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGG 420 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCC-SSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTC
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCC-ChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCC
Confidence 7999999999999653 46789999997642 34456789999999999999999999999976 5689999999999
Q ss_pred CHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCCCcc-
Q 004994 524 TLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNE- 602 (720)
Q Consensus 524 sL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~~- 602 (720)
+|.+++... ...+++..+..++.++++||+|||+. +||||||||+|||++.++.+||+|||+++.+.......
T Consensus 421 ~L~~~l~~~---~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~ 494 (613)
T 2ozo_A 421 PLHKFLVGK---REEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYT 494 (613)
T ss_dssp BHHHHHTTC---TTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC-------
T ss_pred cHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceee
Confidence 999999643 35689999999999999999999997 99999999999999999999999999998764332211
Q ss_pred cccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcccccCchhhhhhhcCCCCC
Q 004994 603 LSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLD 680 (720)
Q Consensus 603 ~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (720)
......++..|+|||.+ .+.++.++|||||||++|||+| |+.||...........+. ....
T Consensus 495 ~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~-----------------~~~~ 557 (613)
T 2ozo_A 495 ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIE-----------------QGKR 557 (613)
T ss_dssp -------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHHH-----------------TTCC
T ss_pred eccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH-----------------cCCC
Confidence 11122345789999998 5789999999999999999998 999997644322111110 0000
Q ss_pred chhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 681 GAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 681 ~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
...+..++.++.+++.+||+.||++||++++|++.|+++
T Consensus 558 ~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~ 596 (613)
T 2ozo_A 558 MECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRAC 596 (613)
T ss_dssp CCCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHH
T ss_pred CCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 011223446789999999999999999999999999875
No 147
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=3.8e-40 Score=347.80 Aligned_cols=267 Identities=22% Similarity=0.312 Sum_probs=203.4
Q ss_pred CCCCCeeccCCCceEEEEEeC-----CCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEecc--CCeEE
Q 004994 442 FSEGNFIGEGLLGSVYKAELP-----GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNE--HGQHL 514 (720)
Q Consensus 442 ~~~~~~lg~G~~g~Vy~~~~~-----~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~--~~~~~ 514 (720)
|...+.||+|+||+||++.+. +++.||||++.... .....+.+.+|++++++++||||+++++++.+ ....+
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 111 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADA-GPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQ 111 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTC-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEecccc-ChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEE
Confidence 377899999999999988542 68899999997543 23445779999999999999999999999976 46789
Q ss_pred EEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCC
Q 004994 515 LVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPL 594 (720)
Q Consensus 515 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~ 594 (720)
+||||+++|+|.+++.. ..+++..+..++.+++.||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 112 lv~e~~~~~~L~~~l~~-----~~~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~ 183 (318)
T 3lxp_A 112 LVMEYVPLGSLRDYLPR-----HSIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKA 183 (318)
T ss_dssp EEECCCTTCBHHHHGGG-----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEE
T ss_pred EEEecccCCcHHHHHhh-----CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCcccccc
Confidence 99999999999999853 3488999999999999999999997 999999999999999999999999999987
Q ss_pred CCCCCCc-ccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhh
Q 004994 595 LFSGSTN-ELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALS 672 (720)
Q Consensus 595 ~~~~~~~-~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (720)
....... .......++..|+|||.. ...++.++||||||+++|||+||+.||....... .....+..... ....+.
T Consensus 184 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~-~~~~~~~~~~~-~~~~~~ 261 (318)
T 3lxp_A 184 VPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKF-LELIGIAQGQM-TVLRLT 261 (318)
T ss_dssp CCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHH-HHHHCSCCHHH-HHHHHH
T ss_pred ccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhh-hhhhcccccch-hHHHHH
Confidence 7543221 122334567789999998 5568899999999999999999999986421100 00000000000 001111
Q ss_pred hhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 673 RMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 673 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
+.+........+..++.++.+++.+||+.||++|||++|+++.|+++
T Consensus 262 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l 308 (318)
T 3lxp_A 262 ELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTV 308 (318)
T ss_dssp HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHhcccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence 11111111112233456789999999999999999999999999876
No 148
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.3e-40 Score=355.50 Aligned_cols=254 Identities=25% Similarity=0.405 Sum_probs=190.2
Q ss_pred CCCCCeeccCCCceEEEEEeC--CC--cEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEecc-CCeEEEE
Q 004994 442 FSEGNFIGEGLLGSVYKAELP--GG--KLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNE-HGQHLLV 516 (720)
Q Consensus 442 ~~~~~~lg~G~~g~Vy~~~~~--~g--~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~-~~~~~lv 516 (720)
|...+.||+|+||+||+|... ++ ..||||.+... ......+.|.+|++++++++||||++++++|.+ .+..++|
T Consensus 91 ~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv 169 (373)
T 3c1x_A 91 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI-TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV 169 (373)
T ss_dssp EEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSC-SCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred eecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCC-CCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence 455688999999999999653 32 46899998653 233456789999999999999999999998754 5678999
Q ss_pred EeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCC
Q 004994 517 YDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLF 596 (720)
Q Consensus 517 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~ 596 (720)
|||+++|+|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++.+.
T Consensus 170 ~e~~~~g~L~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~ 243 (373)
T 3c1x_A 170 LPYMKHGDLRNFIRNE---THNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMY 243 (373)
T ss_dssp EECCTTCBHHHHHHCT---TCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC-------
T ss_pred EECCCCCCHHHHHhhc---ccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeecccccccc
Confidence 9999999999999642 34578899999999999999999997 99999999999999999999999999998764
Q ss_pred CCCCcc--cccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcccccCchhhhh
Q 004994 597 SGSTNE--LSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALS 672 (720)
Q Consensus 597 ~~~~~~--~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (720)
...... ......++..|+|||.. .+.++.++|||||||++|||+| |..||...........+... .
T Consensus 244 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~~~~----------~ 313 (373)
T 3c1x_A 244 DKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG----------R 313 (373)
T ss_dssp --------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHHHTT----------C
T ss_pred ccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHHcC----------C
Confidence 332111 12234467789999988 5679999999999999999999 77888654332211111000 0
Q ss_pred hhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 673 RMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 673 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
.... +..++..+.+++.+||+.||++|||++|++++|+++
T Consensus 314 ~~~~-------p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i 353 (373)
T 3c1x_A 314 RLLQ-------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 353 (373)
T ss_dssp CCCC-------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCC-------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 0001 112335788999999999999999999999999986
No 149
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=5.2e-41 Score=351.53 Aligned_cols=262 Identities=25% Similarity=0.340 Sum_probs=186.7
Q ss_pred hcCCCCCCeeccCCCceEEEEEeCCCcEEEEEEecccccccccHHHHHHHHHHHHc--cCCCceeEEEeEeccCC----e
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISR--LRHGNIVELIGYCNEHG----Q 512 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~--l~H~niv~l~~~~~~~~----~ 512 (720)
.++|...+.||+|+||+||+|... |+.||||++... ....+.+|.+++.. ++||||+++++++.+.+ .
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~-----~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 75 (303)
T 3gxj_A 2 ARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR-----EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQ 75 (303)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-T-----THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEE
T ss_pred cceeeehhhccCCCCeEEEEEEEc-CcceEEEEeccc-----chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccce
Confidence 357899999999999999999764 889999998632 34567788888887 79999999999998765 7
Q ss_pred EEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhc-----CCCCeeecCCCCCCeEEcCCCCeEEc
Q 004994 513 HLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEV-----CEPPIVHGNFKSSNILLDEKLIVRVS 587 (720)
Q Consensus 513 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~-----~~~~ivHrDlkp~NiLl~~~~~~kl~ 587 (720)
.++||||+++|+|.+++.. ..+++..+..++.+++.||+|||.. +..+|+||||||+|||++.++.+||+
T Consensus 76 ~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nil~~~~~~~kl~ 150 (303)
T 3gxj_A 76 LWLVSDYHEHGSLFDYLNR-----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIA 150 (303)
T ss_dssp EEEEEECCTTCCHHHHHHH-----CCBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCCGGGC-CCTTCCC-BC
T ss_pred eEEEEeccCCCCHHHHHhc-----cCcchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCCHHHeEECCCCCEEEe
Confidence 8999999999999999942 3577888999999999999999921 13499999999999999999999999
Q ss_pred cccCCCCCCCCCCcc--cccCccccccCCCCccCCCC-------CCCccchHhHHHHHHHHHhC----------CCCCCC
Q 004994 588 DCGLAPLLFSGSTNE--LSEGLLTAHGSGAPEFESGS-------YSCQSDVYSLGVVMLELLTG----------RKPYDR 648 (720)
Q Consensus 588 DFGla~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~-------~~~~~Dv~S~Gvvl~elltG----------~~Pf~~ 648 (720)
|||+++......... ......++..|+|||.+.+. ++.++|||||||++|||+|| +.||..
T Consensus 151 DFg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~ 230 (303)
T 3gxj_A 151 DLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYD 230 (303)
T ss_dssp CCCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTT
T ss_pred ecCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccc
Confidence 999997764432211 12234689999999988442 34689999999999999999 556543
Q ss_pred CCCccc--cchhhhcccccCchhhhhhhcCCCCCchh-hHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhC
Q 004994 649 SRPRGE--QSLVRWAIPRLHDIDALSRMVDPSLDGAY-LAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCMI 720 (720)
Q Consensus 649 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~ 720 (720)
...... ..... ........+.....+ ....+..+.+++.+||+.||++|||++||++.|+++.
T Consensus 231 ~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~ 296 (303)
T 3gxj_A 231 LVPSDPSVEEMRK---------VVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLS 296 (303)
T ss_dssp TCC-CCCCC-CHH---------HHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-C
T ss_pred cCCCCccHHHHHH---------HHHHhhcCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhh
Confidence 221110 00000 011111222232222 2356678999999999999999999999999999763
No 150
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=2.5e-40 Score=351.24 Aligned_cols=267 Identities=19% Similarity=0.357 Sum_probs=199.7
Q ss_pred cCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEe
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYD 518 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 518 (720)
++|...+.||+|+||.||+|.. .+|+.||||++..........+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 104 (331)
T 4aaa_A 25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFE 104 (331)
T ss_dssp GGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEe
Confidence 5678889999999999999966 458999999987654444556778899999999999999999999999999999999
Q ss_pred eCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCC
Q 004994 519 YGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSG 598 (720)
Q Consensus 519 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~ 598 (720)
|+++++|.++... ...+++..+..++.+++.||.|||+. +|+||||||+|||++.++.+||+|||+++.+...
T Consensus 105 ~~~~~~l~~~~~~----~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 177 (331)
T 4aaa_A 105 FVDHTILDDLELF----PNGLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAP 177 (331)
T ss_dssp CCSEEHHHHHHHS----TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCTTC------
T ss_pred cCCcchHHHHHhh----ccCCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCCCceeecCC
Confidence 9999999887643 34588999999999999999999997 9999999999999999999999999999866432
Q ss_pred CCcccccCccccccCCCCccCCC--CCCCccchHhHHHHHHHHHhCCCCCCCCCCccccch-hhhcccccCc-------h
Q 004994 599 STNELSEGLLTAHGSGAPEFESG--SYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSL-VRWAIPRLHD-------I 668 (720)
Q Consensus 599 ~~~~~~~~~~~~~~~~aPE~~~~--~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~-~~~~~~~~~~-------~ 668 (720)
. .......++.+|+|||.+.+ .++.++|||||||++|||++|+.||........... .......... .
T Consensus 178 ~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (331)
T 4aaa_A 178 G--EVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKN 255 (331)
T ss_dssp --------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHC
T ss_pred c--cccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhc
Confidence 2 12234567889999998843 689999999999999999999999976443221110 0000000000 0
Q ss_pred hhhhhhcCCCCC-----chhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 669 DALSRMVDPSLD-----GAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 669 ~~~~~~~~~~~~-----~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
........+... .......++++.+++.+||+.||++|||++|++++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 307 (331)
T 4aaa_A 256 PVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH 307 (331)
T ss_dssp GGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred cccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 000000111111 01111235678999999999999999999999865
No 151
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=8.9e-40 Score=351.91 Aligned_cols=251 Identities=14% Similarity=0.168 Sum_probs=200.5
Q ss_pred hcCCCCCCeeccCCCceEEEEE------eCCCcEEEEEEecccccccccHHHHHHHHHHHHccC---CCceeEEEeEecc
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAE------LPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLR---HGNIVELIGYCNE 509 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~------~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~---H~niv~l~~~~~~ 509 (720)
.++|...+.||+|+||+||+|. ..+++.||||++... ...++..|++++++++ |+||+.+++++..
T Consensus 64 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-----~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~ 138 (365)
T 3e7e_A 64 SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA-----NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLF 138 (365)
T ss_dssp SSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC-----CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEEC
T ss_pred CEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC-----ChhHHHHHHHHHHHhhhhhhhhhhhhheeeec
Confidence 4568888999999999999993 456899999999643 3457788888888887 9999999999999
Q ss_pred CCeEEEEEeeCCCCCHHHHhhccch-hccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcC--------
Q 004994 510 HGQHLLVYDYGGNCTLHDLLHSDEE-AHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDE-------- 580 (720)
Q Consensus 510 ~~~~~lv~e~~~~gsL~~~l~~~~~-~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~-------- 580 (720)
.+..++||||+++|+|.+++..... ....+++..+..++.|+++||+|||+. +||||||||+|||++.
T Consensus 139 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~~~~~~~ 215 (365)
T 3e7e_A 139 QNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGFLEQDDE 215 (365)
T ss_dssp SSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGGTCC---
T ss_pred CCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecccccCcccc
Confidence 9999999999999999999964322 245699999999999999999999987 8999999999999998
Q ss_pred ---CCCeEEccccCCCCCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccc
Q 004994 581 ---KLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQS 656 (720)
Q Consensus 581 ---~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~ 656 (720)
++.+||+|||+|+.+.............||.+|+|||++ ...++.++|||||||++|||+||+.||.......
T Consensus 216 ~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~--- 292 (365)
T 3e7e_A 216 DDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGE--- 292 (365)
T ss_dssp ---CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTE---
T ss_pred ccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCc---
Confidence 899999999999765433333334456789999999998 4468999999999999999999999995322110
Q ss_pred hhhhcccccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCC-CCHHHHHHHHHhh
Q 004994 657 LVRWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFR-PPMSEIVQDLLCM 719 (720)
Q Consensus 657 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~R-Pt~~evl~~L~~~ 719 (720)
+. ....+... . ..+.+.+++.+|++.+|.+| |+++++.+.|+++
T Consensus 293 ---~~---------~~~~~~~~-~------~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~ 337 (365)
T 3e7e_A 293 ---CK---------PEGLFRRL-P------HLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKV 337 (365)
T ss_dssp ---EE---------ECSCCTTC-S------SHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHH
T ss_pred ---ee---------echhcccc-C------cHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHH
Confidence 00 00000000 0 12456789999999999999 6888888888765
No 152
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=2.2e-40 Score=348.58 Aligned_cols=257 Identities=23% Similarity=0.318 Sum_probs=192.9
Q ss_pred HhcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEeccccc-ccccHHHHHHHHHHHHccCCCceeEEEeEeccCC----
Q 004994 438 YTNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVS-QRQTDEEFLELASTISRLRHGNIVELIGYCNEHG---- 511 (720)
Q Consensus 438 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~---- 511 (720)
+.++|...+.||+|+||+||+|.. .+++.||||++..... .....+.+.+|++++++++||||+++++++...+
T Consensus 10 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~ 89 (311)
T 3ork_A 10 LSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGP 89 (311)
T ss_dssp ETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEE
T ss_pred ecCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCc
Confidence 346788899999999999999965 6799999999975432 2234467899999999999999999999986543
Q ss_pred eEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccC
Q 004994 512 QHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGL 591 (720)
Q Consensus 512 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGl 591 (720)
..++||||+++++|.+++.. ...+++.....++.++++||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 90 ~~~lv~e~~~g~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~ 162 (311)
T 3ork_A 90 LPYIVMEYVDGVTLRDIVHT----EGPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGI 162 (311)
T ss_dssp EEEEEEECCCEEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCCSC
T ss_pred ccEEEEecCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeeccC
Confidence 34999999999999999853 34689999999999999999999997 999999999999999999999999999
Q ss_pred CCCCCCCCCc-ccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchh
Q 004994 592 APLLFSGSTN-ELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDID 669 (720)
Q Consensus 592 a~~~~~~~~~-~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 669 (720)
++.+...... .......++..|+|||.. ...++.++|||||||++|||+||+.||......... ......
T Consensus 163 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~--~~~~~~------ 234 (311)
T 3ork_A 163 ARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVA--YQHVRE------ 234 (311)
T ss_dssp C------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH--HHHHHC------
T ss_pred cccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHH--HHHhcC------
Confidence 9876443221 122335689999999998 557899999999999999999999999754321110 000000
Q ss_pred hhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 670 ALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 670 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.+..........+.++.+++.+||+.||++||++.+++++
T Consensus 235 ------~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~ 274 (311)
T 3ork_A 235 ------DPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRA 274 (311)
T ss_dssp ------CCCCHHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHH
T ss_pred ------CCCCcccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHH
Confidence 0000001111234678899999999999999977766643
No 153
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.6e-39 Score=335.98 Aligned_cols=250 Identities=24% Similarity=0.360 Sum_probs=183.7
Q ss_pred cCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEeccccc-ccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVS-QRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVY 517 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 517 (720)
++|...+.||+|+||.||+|.. .+|+.||||++..... .....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 11 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 90 (278)
T 3cok_A 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVL 90 (278)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEE
Confidence 5688889999999999999965 5799999999964321 2234577899999999999999999999999999999999
Q ss_pred eeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCC
Q 004994 518 DYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFS 597 (720)
Q Consensus 518 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~ 597 (720)
||+++++|.+++... ...+++..+..++.++++||.|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 91 e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~ 164 (278)
T 3cok_A 91 EMCHNGEMNRYLKNR---VKPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKM 164 (278)
T ss_dssp ECCTTEEHHHHHHTC---SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCCTTCEECC-
T ss_pred ecCCCCcHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEeecceeeccC
Confidence 999999999998642 35689999999999999999999997 999999999999999999999999999987643
Q ss_pred CCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcC
Q 004994 598 GSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVD 676 (720)
Q Consensus 598 ~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (720)
... ......++..|+|||.. ...++.++||||||+++|||++|+.||...........+ .. . +
T Consensus 165 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~--~~---~---------~ 228 (278)
T 3cok_A 165 PHE--KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKV--VL---A---------D 228 (278)
T ss_dssp -----------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----C--CS---S---------C
T ss_pred CCC--cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHHHH--hh---c---------c
Confidence 221 12235678899999998 456899999999999999999999999754322111000 00 0 0
Q ss_pred CCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 677 PSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 677 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
... +...+.++.+++.+||+.||++|||++|++++
T Consensus 229 ~~~----~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 263 (278)
T 3cok_A 229 YEM----PSFLSIEAKDLIHQLLRRNPADRLSLSSVLDH 263 (278)
T ss_dssp CCC----CTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred cCC----ccccCHHHHHHHHHHcccCHhhCCCHHHHhcC
Confidence 001 11123568899999999999999999999864
No 154
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=8.2e-40 Score=355.96 Aligned_cols=274 Identities=16% Similarity=0.230 Sum_probs=208.0
Q ss_pred hcCCCCCCeeccCCCceEEEEEeC-CCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCC--eEEE
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHG--QHLL 515 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~--~~~l 515 (720)
.++|...++||+|+||+||+|... +|+.||||++..... ....+.+.+|++++++++||||+++++++.+.+ ..++
T Consensus 8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~l 86 (396)
T 4eut_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF-LRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVL 86 (396)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG-GSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEE
T ss_pred CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccc-cchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEE
Confidence 356888899999999999999664 599999999975432 344577889999999999999999999987654 7899
Q ss_pred EEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEE----cCCCCeEEccccC
Q 004994 516 VYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILL----DEKLIVRVSDCGL 591 (720)
Q Consensus 516 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl----~~~~~~kl~DFGl 591 (720)
||||+++|+|.+++.... ....+++..+..++.+++.||+|||+. +|+||||||+|||+ +.++.+||+|||+
T Consensus 87 v~e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~ 162 (396)
T 4eut_A 87 IMEFCPCGSLYTVLEEPS-NAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGA 162 (396)
T ss_dssp EECCCTTEEHHHHTTSGG-GTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECCGGG
T ss_pred EEecCCCCCHHHHHHhhh-cccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEecCCC
Confidence 999999999999997542 223489999999999999999999997 99999999999999 7888899999999
Q ss_pred CCCCCCCCCcccccCccccccCCCCccCC---------CCCCCccchHhHHHHHHHHHhCCCCCCCCCCcc-ccchhh-h
Q 004994 592 APLLFSGSTNELSEGLLTAHGSGAPEFES---------GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRG-EQSLVR-W 660 (720)
Q Consensus 592 a~~~~~~~~~~~~~~~~~~~~~~aPE~~~---------~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~-~~~~~~-~ 660 (720)
++...... ......++..|+|||.+. ..++.++|||||||++|||+||+.||....... ...... .
T Consensus 163 a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~ 239 (396)
T 4eut_A 163 ARELEDDE---QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKI 239 (396)
T ss_dssp CEECCCGG---GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHH
T ss_pred ceEccCCC---ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHH
Confidence 98764322 223456889999999873 357889999999999999999999996432211 111110 0
Q ss_pred cccccC-chhhhhhhc--------CCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhC
Q 004994 661 AIPRLH-DIDALSRMV--------DPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCMI 720 (720)
Q Consensus 661 ~~~~~~-~~~~~~~~~--------~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~ 720 (720)
...... ......... +..............+.+++.+||+.||++|||+.|+++.+++++
T Consensus 240 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il 308 (396)
T 4eut_A 240 ITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDIL 308 (396)
T ss_dssp HHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHH
T ss_pred hcCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHh
Confidence 000000 000000000 000111233566778899999999999999999999999998864
No 155
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.5e-39 Score=339.64 Aligned_cols=255 Identities=24% Similarity=0.326 Sum_probs=197.3
Q ss_pred CCCCCeeccCCCceEEEEEeC-CC---cEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeE-EEE
Q 004994 442 FSEGNFIGEGLLGSVYKAELP-GG---KLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQH-LLV 516 (720)
Q Consensus 442 ~~~~~~lg~G~~g~Vy~~~~~-~g---~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~-~lv 516 (720)
|...++||+|+||+||+|... ++ ..||+|.+.... .....+.+.+|++++++++||||+++++++.+.+.. ++|
T Consensus 23 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v 101 (298)
T 3pls_A 23 THSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRIT-EMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL 101 (298)
T ss_dssp EEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCC-SHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred EccCceeccCCCceEEEEEEecCCCceeeeeeeeccccc-cHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence 445688999999999999642 33 379999997532 234557889999999999999999999999766554 999
Q ss_pred EeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCC
Q 004994 517 YDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLF 596 (720)
Q Consensus 517 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~ 596 (720)
|||+.+|+|.+++... ...+++..+..++.++++||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 102 ~e~~~~~~L~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~ 175 (298)
T 3pls_A 102 LPYMCHGDLLQFIRSP---QRNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDIL 175 (298)
T ss_dssp ECCCTTCBHHHHHHCT---TCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTTSSCTTT
T ss_pred EecccCCCHHHHHhcc---ccCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCCCccccc
Confidence 9999999999999642 35678999999999999999999997 99999999999999999999999999998664
Q ss_pred CCCC--cccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCC-CCCCCccccchhhhcccccCchhhhh
Q 004994 597 SGST--NELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPY-DRSRPRGEQSLVRWAIPRLHDIDALS 672 (720)
Q Consensus 597 ~~~~--~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf-~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (720)
.... ........++..|+|||.. ...++.++||||||+++|||+||..|+ ...........+.
T Consensus 176 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~------------- 242 (298)
T 3pls_A 176 DREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLA------------- 242 (298)
T ss_dssp TGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHH-------------
T ss_pred CCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhh-------------
Confidence 3221 1122334567889999998 457899999999999999999965554 3322211111000
Q ss_pred hhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhC
Q 004994 673 RMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCMI 720 (720)
Q Consensus 673 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~ 720 (720)
...... .+...+..+.+++.+||+.||.+|||++|+++.|++++
T Consensus 243 ~~~~~~----~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~ 286 (298)
T 3pls_A 243 QGRRLP----QPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIV 286 (298)
T ss_dssp TTCCCC----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred cCCCCC----CCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 000000 11122357889999999999999999999999999863
No 156
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=7.7e-39 Score=341.29 Aligned_cols=271 Identities=24% Similarity=0.313 Sum_probs=207.2
Q ss_pred CHHHHHHHhcCCCCCCeeccCCCceEEEEEeCCCcEEEEEEecccccccccHHHHHHHHHHHHc--cCCCceeEEEeEec
Q 004994 431 TIASLQQYTNSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISR--LRHGNIVELIGYCN 508 (720)
Q Consensus 431 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~--l~H~niv~l~~~~~ 508 (720)
.........++|...+.||+|+||+||+|.. +|+.||||++... ....+.+|.+++.. ++||||+++++++.
T Consensus 33 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~-----~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~ 106 (342)
T 1b6c_B 33 PLLVQRTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR-----EERSWFREAEIYQTVMLRHENILGFIAADN 106 (342)
T ss_dssp CHHHHHHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG-----GHHHHHHHHHHHHHSCCCCTTBCCEEEEEE
T ss_pred ceeecccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch-----hHHHHHHHHHHHHHhhcCCCcEEEEEeeec
Confidence 3344455678899999999999999999987 5899999998632 34567888888887 79999999999998
Q ss_pred cCC----eEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhc-----CCCCeeecCCCCCCeEEc
Q 004994 509 EHG----QHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEV-----CEPPIVHGNFKSSNILLD 579 (720)
Q Consensus 509 ~~~----~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~-----~~~~ivHrDlkp~NiLl~ 579 (720)
..+ ..++||||+++|+|.+++.. ..+++..+..++.++++||+|||.. +..+|+||||||+|||++
T Consensus 107 ~~~~~~~~~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~ 181 (342)
T 1b6c_B 107 KDNGTWTQLWLVSDYHEHGSLFDYLNR-----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVK 181 (342)
T ss_dssp CCCSSCCCEEEEECCCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEEC
T ss_pred ccCCccceeEEEEeecCCCcHHHHHhc-----cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEEC
Confidence 765 78999999999999999953 3588999999999999999999931 123899999999999999
Q ss_pred CCCCeEEccccCCCCCCCCCCcc--cccCccccccCCCCccCCCC-------CCCccchHhHHHHHHHHHhC--------
Q 004994 580 EKLIVRVSDCGLAPLLFSGSTNE--LSEGLLTAHGSGAPEFESGS-------YSCQSDVYSLGVVMLELLTG-------- 642 (720)
Q Consensus 580 ~~~~~kl~DFGla~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~-------~~~~~Dv~S~Gvvl~elltG-------- 642 (720)
.++++||+|||+++......... ......++..|+|||...+. ++.++|||||||++|||+||
T Consensus 182 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~ 261 (342)
T 1b6c_B 182 KNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHE 261 (342)
T ss_dssp TTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCC
T ss_pred CCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCccc
Confidence 99999999999997764432211 22345688999999998543 23689999999999999999
Q ss_pred --CCCCCCCCCccccchhhhcccccCchhhhhhhcCCCCCch-hhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 643 --RKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDGA-YLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 643 --~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
+.||......... ...+.. ........+.+... ...+.+..+.+++.+||+.||++|||++||+++|+++
T Consensus 262 ~~~~p~~~~~~~~~~-~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i 334 (342)
T 1b6c_B 262 DYQLPYYDLVPSDPS-VEEMRK------VVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQL 334 (342)
T ss_dssp CCCCTTTTTSCSSCC-HHHHHH------HHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred ccccCccccCcCccc-HHHHHH------HHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHH
Confidence 6777543221110 000000 00011122222222 1235677899999999999999999999999999986
No 157
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.4e-40 Score=361.88 Aligned_cols=263 Identities=20% Similarity=0.220 Sum_probs=205.3
Q ss_pred CHHHHHHHhcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccc-cccccHHHHHHHHHHHHccCCCceeEEEeEec
Q 004994 431 TIASLQQYTNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTV-SQRQTDEEFLELASTISRLRHGNIVELIGYCN 508 (720)
Q Consensus 431 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~-~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~ 508 (720)
.+++.....++|...+.||+|+||+||+|+. .+|+.||||++.+.. ......+.+.+|.+++..++||||+++++++.
T Consensus 52 ~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 131 (412)
T 2vd5_A 52 RLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQ 131 (412)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEe
Confidence 3445555668899999999999999999976 479999999996432 12223345889999999999999999999999
Q ss_pred cCCeEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEcc
Q 004994 509 EHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSD 588 (720)
Q Consensus 509 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~D 588 (720)
+.+..|+||||+++|+|.+++... ...+++.....++.+++.||+|||+. +||||||||+|||++.++++||+|
T Consensus 132 ~~~~~~lVmE~~~gg~L~~~l~~~---~~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g~vkL~D 205 (412)
T 2vd5_A 132 DENYLYLVMEYYVGGDLLTLLSKF---GERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCGHIRLAD 205 (412)
T ss_dssp CSSEEEEEECCCCSCBHHHHHHHH---SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECC
T ss_pred eCCEEEEEEcCCCCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCCCEEEee
Confidence 999999999999999999999532 24688999999999999999999997 999999999999999999999999
Q ss_pred ccCCCCCCCCCCcccccCccccccCCCCccCC--------CCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccc-hhh
Q 004994 589 CGLAPLLFSGSTNELSEGLLTAHGSGAPEFES--------GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQS-LVR 659 (720)
Q Consensus 589 FGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~--------~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~-~~~ 659 (720)
||+++.+..... .......||+.|+|||++. +.|+.++|||||||++|||++|+.||.......... +..
T Consensus 206 FGla~~~~~~~~-~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~ 284 (412)
T 2vd5_A 206 FGSCLKLRADGT-VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVH 284 (412)
T ss_dssp CTTCEECCTTSC-EECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHT
T ss_pred chhheeccCCCc-cccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHh
Confidence 999987643322 1223457899999999873 358999999999999999999999997543221111 111
Q ss_pred hcccccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCC---CCHHHHHHH
Q 004994 660 WAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFR---PPMSEIVQD 715 (720)
Q Consensus 660 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~R---Pt~~evl~~ 715 (720)
+. ....-+. .....+.++.+++.+||. +|++| |+++|+++|
T Consensus 285 ~~----------~~~~~p~----~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~H 328 (412)
T 2vd5_A 285 YK----------EHLSLPL----VDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTH 328 (412)
T ss_dssp HH----------HHCCCC--------CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTS
T ss_pred cc----------cCcCCCc----cccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcC
Confidence 00 0000011 011234678899999999 99998 699999865
No 158
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=1.2e-39 Score=337.49 Aligned_cols=255 Identities=21% Similarity=0.314 Sum_probs=199.4
Q ss_pred hcCCCCCCeeccCCCceEEEEEeCC----CcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEE
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAELPG----GKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHL 514 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~~~----g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~ 514 (720)
.++|...+.||+|+||+||+|...+ +..||+|.+.... .....+.+.+|++++++++||||+++++++.+. ..+
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~~~ 88 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDC-TLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE-PTW 88 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTS-CHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS-SCE
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEeccccc-CchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC-CCE
Confidence 3567788999999999999996532 3469999997543 234457899999999999999999999998754 568
Q ss_pred EEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCC
Q 004994 515 LVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPL 594 (720)
Q Consensus 515 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~ 594 (720)
+||||+++++|.+++.. ....+++..+..++.++++||.|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 89 ~v~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 162 (281)
T 3cc6_A 89 IIMELYPYGELGHYLER---NKNSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGDFGLSRY 162 (281)
T ss_dssp EEEECCTTCBHHHHHHH---HTTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECCCCGGGC
T ss_pred EEEecCCCCCHHHHHHh---ccccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCccCCCcc
Confidence 99999999999999853 234688999999999999999999997 999999999999999999999999999987
Q ss_pred CCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcccccCchhhhh
Q 004994 595 LFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALS 672 (720)
Q Consensus 595 ~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (720)
...... .......++..|+|||.. ...++.++||||||+++|||+| |+.||...........+.
T Consensus 163 ~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~~------------- 228 (281)
T 3cc6_A 163 IEDEDY-YKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLE------------- 228 (281)
T ss_dssp C----------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHHH-------------
T ss_pred cccccc-cccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHHh-------------
Confidence 643221 112234457789999988 5678999999999999999998 999996543222111110
Q ss_pred hhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 673 RMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 673 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
....... +...++.+.+++.+||+.||++|||+.|++++|+++
T Consensus 229 ~~~~~~~----~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~ 271 (281)
T 3cc6_A 229 KGDRLPK----PDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDV 271 (281)
T ss_dssp HTCCCCC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred cCCCCCC----CCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHH
Confidence 0000000 112235688999999999999999999999999876
No 159
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=5.7e-40 Score=348.83 Aligned_cols=245 Identities=22% Similarity=0.327 Sum_probs=199.2
Q ss_pred HHhcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEeccccccc------ccHHHHHHHHHHHHccCCCceeEEEeEecc
Q 004994 437 QYTNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQR------QTDEEFLELASTISRLRHGNIVELIGYCNE 509 (720)
Q Consensus 437 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~------~~~~~~~~e~~~l~~l~H~niv~l~~~~~~ 509 (720)
.+.++|...+.||+|+||+||+|.. .+++.||||++....... ...+.+.+|++++++++||||+++++++.+
T Consensus 21 ~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~ 100 (335)
T 3dls_A 21 EYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFEN 100 (335)
T ss_dssp HHHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEEC
T ss_pred ccccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEee
Confidence 3567899999999999999999964 679999999997543211 133457789999999999999999999999
Q ss_pred CCeEEEEEeeCCCC-CHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEcc
Q 004994 510 HGQHLLVYDYGGNC-TLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSD 588 (720)
Q Consensus 510 ~~~~~lv~e~~~~g-sL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~D 588 (720)
.+..++||||+.+| +|.+++.. ...+++..+..++.+++.||.|||+. +|+||||||+|||++.++.+||+|
T Consensus 101 ~~~~~lv~e~~~~g~~l~~~~~~----~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~D 173 (335)
T 3dls_A 101 QGFFQLVMEKHGSGLDLFAFIDR----HPRLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLID 173 (335)
T ss_dssp SSEEEEEEECCTTSCBHHHHHHT----CCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECC
T ss_pred CCEEEEEEEeCCCCccHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCCcEEEee
Confidence 99999999999777 99998853 34689999999999999999999997 999999999999999999999999
Q ss_pred ccCCCCCCCCCCcccccCccccccCCCCccCC-CCC-CCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccC
Q 004994 589 CGLAPLLFSGSTNELSEGLLTAHGSGAPEFES-GSY-SCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLH 666 (720)
Q Consensus 589 FGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~-~~~-~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~ 666 (720)
||+++...... ......++..|+|||.+. ..+ +.++|||||||++|||++|+.||...... .
T Consensus 174 fg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-----~-------- 237 (335)
T 3dls_A 174 FGSAAYLERGK---LFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET-----V-------- 237 (335)
T ss_dssp CTTCEECCTTC---CBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG-----T--------
T ss_pred cccceECCCCC---ceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH-----H--------
Confidence 99998764332 223356889999999884 344 78999999999999999999999642110 0
Q ss_pred chhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 667 DIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.....+ +...+.++.+++.+||+.||++|||++|++++
T Consensus 238 -----~~~~~~------~~~~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 238 -----EAAIHP------PYLVSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp -----TTCCCC------SSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred -----hhccCC------CcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000000 00123568899999999999999999999986
No 160
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=5.6e-40 Score=347.95 Aligned_cols=260 Identities=22% Similarity=0.333 Sum_probs=201.0
Q ss_pred hcCCCCCCeeccCCCceEEEEEe------CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCe
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAEL------PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQ 512 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~------~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~ 512 (720)
.++|...+.||+|+||.||+|.. .+++.||||++.... ......++.+|+.++++++||||+++++++.+.+.
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 107 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC-SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP 107 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSC-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEecccc-chhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCC
Confidence 46788899999999999999973 357789999996432 23455678999999999999999999999999999
Q ss_pred EEEEEeeCCCCCHHHHhhccch---hccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcC---CCCeEE
Q 004994 513 HLLVYDYGGNCTLHDLLHSDEE---AHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDE---KLIVRV 586 (720)
Q Consensus 513 ~~lv~e~~~~gsL~~~l~~~~~---~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~---~~~~kl 586 (720)
.++||||+++++|.+++..... ....+++..+..++.++++||.|||+. +|+||||||+|||++. +..+||
T Consensus 108 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~~~~~kl 184 (327)
T 2yfx_A 108 RFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKI 184 (327)
T ss_dssp CEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEE
T ss_pred cEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCCcceEEE
Confidence 9999999999999999965321 124588999999999999999999997 9999999999999984 456999
Q ss_pred ccccCCCCCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcccc
Q 004994 587 SDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPR 664 (720)
Q Consensus 587 ~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~ 664 (720)
+|||+++...............++..|+|||.. .+.++.++||||||+++|||+| |+.||....... ......
T Consensus 185 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~---~~~~~~-- 259 (327)
T 2yfx_A 185 GDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE---VLEFVT-- 259 (327)
T ss_dssp CCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH---HHHHHH--
T ss_pred CccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHH---HHHHHh--
Confidence 999998765433322223345567899999988 6678999999999999999998 999997543211 111100
Q ss_pred cCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 665 LHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 665 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
....+. .+...+..+.+++.+||+.||.+|||+.|++++|+.+
T Consensus 260 --------~~~~~~----~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~ 302 (327)
T 2yfx_A 260 --------SGGRMD----PPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC 302 (327)
T ss_dssp --------TTCCCC----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred --------cCCCCC----CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence 000000 1112335788999999999999999999999999865
No 161
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.5e-39 Score=341.71 Aligned_cols=259 Identities=19% Similarity=0.223 Sum_probs=197.3
Q ss_pred hcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccc-cccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEE
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQ-RQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLV 516 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 516 (720)
.++|...+.||+|+||.||+|.. .+++.||||++...... ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD 112 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence 46788899999999999999975 47899999999754322 23347789999999999999999999999999999999
Q ss_pred EeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCC
Q 004994 517 YDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLF 596 (720)
Q Consensus 517 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~ 596 (720)
|||+++++|.+++.. ...+++..+..++.++++||.|||+. +|+||||||+|||++.++.+||+|||++....
T Consensus 113 ~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 185 (309)
T 2h34_A 113 MRLINGVDLAAMLRR----QGPLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDFGIASATT 185 (309)
T ss_dssp EECCCCEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSCCC-----
T ss_pred EEecCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEecCccCcccc
Confidence 999999999999853 34689999999999999999999997 99999999999999999999999999997664
Q ss_pred CCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhc
Q 004994 597 SGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMV 675 (720)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (720)
.... .......++..|+|||.. ...++.++||||||+++|||+||+.||....... ...........
T Consensus 186 ~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~---~~~~~~~~~~~-------- 253 (309)
T 2h34_A 186 DEKL-TQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSV---MGAHINQAIPR-------- 253 (309)
T ss_dssp ------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHH---HHHHHHSCCCC--------
T ss_pred cccc-ccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHH---HHHHhccCCCC--------
Confidence 3221 122235678899999998 5578999999999999999999999997532110 00000000000
Q ss_pred CCCCCchhhHHHHHHHHHHHHHHhccCCCCCC-CHHHHHHHHHhhC
Q 004994 676 DPSLDGAYLAKSLSRFADIISRCVQWEPGFRP-PMSEIVQDLLCMI 720 (720)
Q Consensus 676 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-t~~evl~~L~~~~ 720 (720)
........+.++.+++.+||+.||++|| +++++++.|++.+
T Consensus 254 ----~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l 295 (309)
T 2h34_A 254 ----PSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAAL 295 (309)
T ss_dssp ----GGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTC
T ss_pred ----ccccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHH
Confidence 0011122335688999999999999999 9999999998764
No 162
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=1.7e-39 Score=364.74 Aligned_cols=254 Identities=22% Similarity=0.267 Sum_probs=202.3
Q ss_pred HhcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEeccccccc-----------ccHHHHHHHHHHHHccCCCceeEEEe
Q 004994 438 YTNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQR-----------QTDEEFLELASTISRLRHGNIVELIG 505 (720)
Q Consensus 438 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~-----------~~~~~~~~e~~~l~~l~H~niv~l~~ 505 (720)
..++|...+.||+|+||+||+|.. .+++.||||++.+..... ...+.+.+|++++++++|||||++++
T Consensus 34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~ 113 (504)
T 3q5i_A 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD 113 (504)
T ss_dssp GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 457899999999999999999965 468999999997543221 34578899999999999999999999
Q ss_pred EeccCCeEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCC---
Q 004994 506 YCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKL--- 582 (720)
Q Consensus 506 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~--- 582 (720)
++.+.+..++||||+++|+|.+++.. ...+++..+..++.+++.||+|||+. +|+||||||+|||++.++
T Consensus 114 ~~~~~~~~~lv~e~~~gg~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~ 186 (504)
T 3q5i_A 114 VFEDKKYFYLVTEFYEGGELFEQIIN----RHKFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLL 186 (504)
T ss_dssp EEECSSEEEEEEECCTTCBHHHHHHH----HSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESSTTCCS
T ss_pred EEEcCCEEEEEEecCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEecCCCCc
Confidence 99999999999999999999998853 35689999999999999999999997 999999999999998776
Q ss_pred CeEEccccCCCCCCCCCCcccccCccccccCCCCccCCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcc
Q 004994 583 IVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFESGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAI 662 (720)
Q Consensus 583 ~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~ 662 (720)
.+||+|||+++...... ......+++.|+|||.+.+.++.++|||||||++|||++|+.||...........+...
T Consensus 187 ~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~- 262 (504)
T 3q5i_A 187 NIKIVDFGLSSFFSKDY---KLRDRLGTAYYIAPEVLKKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKG- 262 (504)
T ss_dssp SEEECCCTTCEECCTTS---CBCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC-
T ss_pred cEEEEECCCCEEcCCCC---ccccccCCcCCCCHHHhccCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC-
Confidence 69999999998764322 22345689999999999888999999999999999999999999754322111111100
Q ss_pred cccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 663 PRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
............+.++.+++.+||+.||.+|||++|++++
T Consensus 263 -------------~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h 302 (504)
T 3q5i_A 263 -------------KYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNS 302 (504)
T ss_dssp -------------CCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred -------------CCCCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 0001111112234678999999999999999999999875
No 163
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=1.5e-39 Score=345.85 Aligned_cols=270 Identities=22% Similarity=0.300 Sum_probs=194.6
Q ss_pred cCCCCCCeeccCCCceEEEEEeCCCcEEEEEEecccccccccHHHHHHHHHH--HHccCCCceeEEEeEec-----cCCe
Q 004994 440 NSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELAST--ISRLRHGNIVELIGYCN-----EHGQ 512 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~--l~~l~H~niv~l~~~~~-----~~~~ 512 (720)
++|...+.||+|+||+||+|+. +++.||||++... ....+..|.++ +..++||||+++++++. ....
T Consensus 13 ~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~-----~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 86 (336)
T 3g2f_A 13 DNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFA-----NRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRME 86 (336)
T ss_dssp TSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGG-----GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEE
T ss_pred HHhheeeecccCCCeEEEEEEE-CCeEEEEEEeecc-----chhhHHHHHHHHHHHhccCcchhhheecccccccCCCce
Confidence 5788889999999999999976 6899999998633 23344445444 44589999999998543 2346
Q ss_pred EEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcC------CCCeeecCCCCCCeEEcCCCCeEE
Q 004994 513 HLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVC------EPPIVHGNFKSSNILLDEKLIVRV 586 (720)
Q Consensus 513 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~------~~~ivHrDlkp~NiLl~~~~~~kl 586 (720)
.++||||+++|+|.+++.. ...++..+.+++.++++||+|||+.+ .++||||||||+|||++.++.+||
T Consensus 87 ~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL 161 (336)
T 3g2f_A 87 YLLVMEYYPNGSLXKYLSL-----HTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVI 161 (336)
T ss_dssp EEEEECCCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEE
T ss_pred EEEEEecCCCCcHHHHHhh-----cccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEE
Confidence 7899999999999999953 34588899999999999999999863 338999999999999999999999
Q ss_pred ccccCCCCCCCCCC------cccccCccccccCCCCccCCC--------CCCCccchHhHHHHHHHHHhCCCCCCCCCCc
Q 004994 587 SDCGLAPLLFSGST------NELSEGLLTAHGSGAPEFESG--------SYSCQSDVYSLGVVMLELLTGRKPYDRSRPR 652 (720)
Q Consensus 587 ~DFGla~~~~~~~~------~~~~~~~~~~~~~~aPE~~~~--------~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~ 652 (720)
+|||+++.+..... ........++..|+|||.+.+ .++.++|||||||++|||+||..||......
T Consensus 162 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~ 241 (336)
T 3g2f_A 162 SDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESV 241 (336)
T ss_dssp CCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCC
T ss_pred eeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccch
Confidence 99999987643211 111223468899999998854 3567899999999999999998776443222
Q ss_pred ccc-chhhhcccccCchhhhhhh-----cCCCCCch--hhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhC
Q 004994 653 GEQ-SLVRWAIPRLHDIDALSRM-----VDPSLDGA--YLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCMI 720 (720)
Q Consensus 653 ~~~-~~~~~~~~~~~~~~~~~~~-----~~~~~~~~--~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~ 720 (720)
... .............+..... ..+.+... .....+.++.+++.+||+.||++|||++|+++.|++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll 317 (336)
T 3g2f_A 242 PEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELM 317 (336)
T ss_dssp CCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred hHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHH
Confidence 111 1110000011111111111 11111111 12235668999999999999999999999999999864
No 164
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=1.2e-39 Score=364.86 Aligned_cols=256 Identities=23% Similarity=0.310 Sum_probs=204.5
Q ss_pred cCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEeccccc-ccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVS-QRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVY 517 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 517 (720)
++|...++||+|+||+||+|+. .+|+.||||++.+... .....+.+..|++++++++||||+++++++.+.+..|+||
T Consensus 185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVm 264 (543)
T 3c4z_A 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVM 264 (543)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEE
Confidence 5678889999999999999976 4699999999975422 2244567899999999999999999999999999999999
Q ss_pred eeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCC
Q 004994 518 DYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFS 597 (720)
Q Consensus 518 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~ 597 (720)
||+++|+|.+++.........+++.....++.+++.||.|||+. +||||||||+|||++.++++||+|||+++.+..
T Consensus 265 E~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~ 341 (543)
T 3c4z_A 265 TIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKA 341 (543)
T ss_dssp CCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeecceeeeccC
Confidence 99999999999875544455789999999999999999999997 999999999999999999999999999987644
Q ss_pred CCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcC
Q 004994 598 GSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVD 676 (720)
Q Consensus 598 ~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (720)
... ......||+.|+|||.+ ...|+.++|||||||++|||+||+.||........... ....+..
T Consensus 342 ~~~--~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~------------~~~~i~~ 407 (543)
T 3c4z_A 342 GQT--KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKE------------LKQRVLE 407 (543)
T ss_dssp TCC--CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHH------------HHHHHHH
T ss_pred CCc--ccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHH------------HHHHHhh
Confidence 322 22345789999999998 45699999999999999999999999976432111100 0011111
Q ss_pred CCCCchhhHHHHHHHHHHHHHHhccCCCCCCCH-----HHHHH
Q 004994 677 PSLDGAYLAKSLSRFADIISRCVQWEPGFRPPM-----SEIVQ 714 (720)
Q Consensus 677 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~-----~evl~ 714 (720)
... .++...+.++.+++.+||+.||++||++ +|+++
T Consensus 408 ~~~--~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~ 448 (543)
T 3c4z_A 408 QAV--TYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRT 448 (543)
T ss_dssp CCC--CCCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHT
T ss_pred ccc--CCCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHc
Confidence 100 0112234678899999999999999975 66664
No 165
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=2.7e-39 Score=337.29 Aligned_cols=262 Identities=19% Similarity=0.263 Sum_probs=198.9
Q ss_pred HHhcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEe-ccCCeEE
Q 004994 437 QYTNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYC-NEHGQHL 514 (720)
Q Consensus 437 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~-~~~~~~~ 514 (720)
...++|...+.||+|+||+||+|.. .+++.||||++..... .+.+.+|+++++.++|++++..++++ .+.+..+
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~ 81 (296)
T 4hgt_A 6 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK----HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNV 81 (296)
T ss_dssp -----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-------CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEE
T ss_pred ccCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc----chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceE
Confidence 3457899999999999999999965 6799999998754322 23578899999999988877766655 6677889
Q ss_pred EEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEE---cCCCCeEEccccC
Q 004994 515 LVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILL---DEKLIVRVSDCGL 591 (720)
Q Consensus 515 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl---~~~~~~kl~DFGl 591 (720)
+||||+ +++|.+++.. ....+++..+..++.+++.||+|||+. +|+||||||+|||+ +.++.+||+|||+
T Consensus 82 lv~e~~-~~~L~~~~~~---~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~ 154 (296)
T 4hgt_A 82 MVMELL-GPSLEDLFNF---CSRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGL 154 (296)
T ss_dssp EEEECC-CCBHHHHHHH---TTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECCCTT
T ss_pred EEEEcc-CCCHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEecCcc
Confidence 999999 8999999853 234689999999999999999999997 99999999999999 7899999999999
Q ss_pred CCCCCCCCCc-----ccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhccccc
Q 004994 592 APLLFSGSTN-----ELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRL 665 (720)
Q Consensus 592 a~~~~~~~~~-----~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~ 665 (720)
++........ .......++..|+|||.. ...++.++|||||||++|||++|+.||................
T Consensus 155 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~--- 231 (296)
T 4hgt_A 155 AKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERIS--- 231 (296)
T ss_dssp CEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHH---
T ss_pred ceeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhh---
Confidence 9876543221 122345688999999998 4578999999999999999999999997644322211111000
Q ss_pred CchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 666 HDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 666 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
. .....+ ........+.++.+++.+||+.||++|||++|+++.|+++
T Consensus 232 -~----~~~~~~--~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~ 278 (296)
T 4hgt_A 232 -E----KKMSTP--IEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNL 278 (296)
T ss_dssp -H----HHHHSC--HHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHH
T ss_pred -c----ccccch--hhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHH
Confidence 0 000000 0001112246789999999999999999999999999886
No 166
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=1.4e-39 Score=336.61 Aligned_cols=249 Identities=26% Similarity=0.411 Sum_probs=194.0
Q ss_pred hcCCCCCCeeccCCCceEEEEEeCCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccC-CeEEEEE
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEH-GQHLLVY 517 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~-~~~~lv~ 517 (720)
.++|...+.||+|+||+||+|.. .|+.||||++... ...+.+.+|++++++++||||+++++++.+. +..++||
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~ 94 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKND----ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 94 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCC----C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEE
T ss_pred hhhceEEeEEecCCCceEEEEEE-cCCEEEEEEecch----hHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEE
Confidence 35678889999999999999977 4889999999743 2456789999999999999999999997554 5789999
Q ss_pred eeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCC
Q 004994 518 DYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFS 597 (720)
Q Consensus 518 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~ 597 (720)
||+++++|.+++... ....+++..+..++.++++||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 95 e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~ 169 (278)
T 1byg_A 95 EYMAKGSLVDYLRSR--GRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS 169 (278)
T ss_dssp CCCTTEEHHHHHHHH--HHHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC------
T ss_pred ecCCCCCHHHHHHhc--ccccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeeccccccccc
Confidence 999999999998642 223478899999999999999999997 999999999999999999999999999976532
Q ss_pred CCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcccccCchhhhhhhc
Q 004994 598 GSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMV 675 (720)
Q Consensus 598 ~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (720)
.. ....++..|+|||.. ...++.++||||||+++|||+| |+.||........ ... +....
T Consensus 170 ~~-----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~---~~~----------~~~~~ 231 (278)
T 1byg_A 170 TQ-----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDV---VPR----------VEKGY 231 (278)
T ss_dssp -----------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGH---HHH----------HTTTC
T ss_pred cc-----cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHH---HHH----------HhcCC
Confidence 21 123457789999998 5678999999999999999998 9999975432111 110 00000
Q ss_pred CCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 676 DPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 676 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
... .+...+.++.+++.+||+.||++|||+.|+++.|+++
T Consensus 232 ~~~----~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i 271 (278)
T 1byg_A 232 KMD----APDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHI 271 (278)
T ss_dssp CCC----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCC----CcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHH
Confidence 111 1122346788999999999999999999999999875
No 167
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=2.4e-39 Score=341.22 Aligned_cols=264 Identities=19% Similarity=0.249 Sum_probs=196.3
Q ss_pred hcCCCC-CCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHcc-CCCceeEEEeEeccCCeEEE
Q 004994 439 TNSFSE-GNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRL-RHGNIVELIGYCNEHGQHLL 515 (720)
Q Consensus 439 ~~~~~~-~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~l 515 (720)
.+.|.. .+.||+|+||+||+|.. .+++.||||++.... ....+.+.+|++++.++ +||||+++++++.+.+..++
T Consensus 11 ~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~l 88 (316)
T 2ac3_A 11 EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQP--GHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYL 88 (316)
T ss_dssp TTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCS--SCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred ceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCc--chhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEE
Confidence 456766 47899999999999964 579999999997542 34567889999999885 79999999999999999999
Q ss_pred EEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCC---eEEccccCC
Q 004994 516 VYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLI---VRVSDCGLA 592 (720)
Q Consensus 516 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~---~kl~DFGla 592 (720)
||||+++|+|.+++.. ...+++.....++.|+++||+|||+. +|+||||||+|||++.++. +||+|||++
T Consensus 89 v~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~ 161 (316)
T 2ac3_A 89 VFEKMRGGSILSHIHK----RRHFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLG 161 (316)
T ss_dssp EEECCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECCTTCC
T ss_pred EEEcCCCCcHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEEccCc
Confidence 9999999999999853 35688999999999999999999997 9999999999999998776 999999999
Q ss_pred CCCCCCCC-----cccccCccccccCCCCccCC------CCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhc
Q 004994 593 PLLFSGST-----NELSEGLLTAHGSGAPEFES------GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWA 661 (720)
Q Consensus 593 ~~~~~~~~-----~~~~~~~~~~~~~~aPE~~~------~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~ 661 (720)
+....... ........++..|+|||.+. ..++.++|||||||++|||+||+.||......... |.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~----~~ 237 (316)
T 2ac3_A 162 SGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCG----WD 237 (316)
T ss_dssp C-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSC----C-
T ss_pred cccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCccccccccc----cc
Confidence 76532211 01112345789999999873 35889999999999999999999999764432210 10
Q ss_pred ccccC---chhhhhhhcCC--CCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 662 IPRLH---DIDALSRMVDP--SLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 662 ~~~~~---~~~~~~~~~~~--~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
..... .......+... ..........+.++.+++.+||+.||++|||++|++++
T Consensus 238 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 296 (316)
T 2ac3_A 238 RGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQH 296 (316)
T ss_dssp ---CCHHHHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred ccccchhHHHHHHHHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 00000 00001111111 11111112234678999999999999999999999975
No 168
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=1e-39 Score=351.04 Aligned_cols=248 Identities=21% Similarity=0.242 Sum_probs=188.6
Q ss_pred cCCCCCCeeccCCCceEEEEEeC-CCcEEEEEEeccccc-ccccHHHHHHHHHH-HHccCCCceeEEEeEeccCCeEEEE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVS-QRQTDEEFLELAST-ISRLRHGNIVELIGYCNEHGQHLLV 516 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~~~~~e~~~-l~~l~H~niv~l~~~~~~~~~~~lv 516 (720)
++|...+.||+|+||+||+|+.. +++.||||++.+... .....+.+..|..+ ++.++||||+++++++.+.+..|+|
T Consensus 38 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv 117 (373)
T 2r5t_A 38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFV 117 (373)
T ss_dssp GGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEE
Confidence 56888899999999999999764 688999999975432 22333456666665 5778999999999999999999999
Q ss_pred EeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCC
Q 004994 517 YDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLF 596 (720)
Q Consensus 517 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~ 596 (720)
|||+++|+|.+++.. ...+++.....++.+++.||+|||+. +|+||||||+|||++.++++||+|||+++...
T Consensus 118 ~E~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~DFG~a~~~~ 190 (373)
T 2r5t_A 118 LDYINGGELFYHLQR----ERCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENI 190 (373)
T ss_dssp EECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCBCGGGB
T ss_pred EeCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEeeCccccccc
Confidence 999999999999853 34678888999999999999999997 99999999999999999999999999998643
Q ss_pred CCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhc
Q 004994 597 SGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMV 675 (720)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (720)
... .......||+.|+|||.+ ...++.++|||||||++|||++|+.||......... ..+.
T Consensus 191 ~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~----------------~~i~ 252 (373)
T 2r5t_A 191 EHN--STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMY----------------DNIL 252 (373)
T ss_dssp CCC--CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHH----------------HHHH
T ss_pred cCC--CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHH----------------HHHH
Confidence 221 223446789999999998 456899999999999999999999999653321111 1111
Q ss_pred CCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 004994 676 DPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQ 714 (720)
Q Consensus 676 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 714 (720)
..... ++...+.++.+++.+||+.||.+||++.+.++
T Consensus 253 ~~~~~--~~~~~~~~~~~li~~lL~~dp~~R~~~~~~~~ 289 (373)
T 2r5t_A 253 NKPLQ--LKPNITNSARHLLEGLLQKDRTKRLGAKDDFM 289 (373)
T ss_dssp HSCCC--CCSSSCHHHHHHHHHHTCSSGGGSTTTTTTHH
T ss_pred hcccC--CCCCCCHHHHHHHHHHcccCHHhCCCCCCCHH
Confidence 10000 01122356889999999999999999854333
No 169
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=5.2e-40 Score=345.93 Aligned_cols=255 Identities=20% Similarity=0.296 Sum_probs=198.2
Q ss_pred HHhcCCCCCCeeccCCCceEEEEEeCCCcEEEEEEecccccccccHHHHHHHHHHHHccC--CCceeEEEeEeccCCeEE
Q 004994 437 QYTNSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLR--HGNIVELIGYCNEHGQHL 514 (720)
Q Consensus 437 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~--H~niv~l~~~~~~~~~~~ 514 (720)
...++|...+.||+|+||.||+|...+++.||||++..........+.+.+|++++++++ |+||+++++++.+.+..+
T Consensus 25 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~ 104 (313)
T 3cek_A 25 VKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIY 104 (313)
T ss_dssp ETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEE
T ss_pred eccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEE
Confidence 345678889999999999999998888999999999765444455678999999999997 599999999999999999
Q ss_pred EEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCC
Q 004994 515 LVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPL 594 (720)
Q Consensus 515 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~ 594 (720)
+||| +.+++|.+++.. ...+++..+..++.++++||.|||+. +|+||||||+|||+++ +.+||+|||+++.
T Consensus 105 lv~e-~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~ 175 (313)
T 3cek_A 105 MVME-CGNIDLNSWLKK----KKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVD-GMLKLIDFGIANQ 175 (313)
T ss_dssp EEEC-CCSEEHHHHHHH----CSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEET-TEEEECCCSSSCC
T ss_pred EEEe-cCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEEC-CeEEEeecccccc
Confidence 9999 567899999853 34688999999999999999999997 9999999999999965 8999999999987
Q ss_pred CCCCCCcccccCccccccCCCCccCCC------------CCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcc
Q 004994 595 LFSGSTNELSEGLLTAHGSGAPEFESG------------SYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAI 662 (720)
Q Consensus 595 ~~~~~~~~~~~~~~~~~~~~aPE~~~~------------~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~ 662 (720)
+.............++..|+|||...+ .++.++|||||||++|||++|+.||.......
T Consensus 176 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~--------- 246 (313)
T 3cek_A 176 MQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI--------- 246 (313)
T ss_dssp --------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHH---------
T ss_pred ccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHH---------
Confidence 754433323334568899999998743 68889999999999999999999996532111
Q ss_pred cccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 663 PRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
..+..++++......+...+.++.+++.+||+.||++|||++|++++
T Consensus 247 ------~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 293 (313)
T 3cek_A 247 ------SKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 293 (313)
T ss_dssp ------HHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ------HHHHHHHhcccccCCcccchHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 11112222221111112223578899999999999999999999975
No 170
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=1.2e-39 Score=348.17 Aligned_cols=263 Identities=18% Similarity=0.189 Sum_probs=194.4
Q ss_pred cCCCCCCeeccCCCceEEEEEeC----CCcEEEEEEeccccccc---------ccHHHHHHHHHHHHccCCCceeEEEeE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAELP----GGKLLAVKKLSNTVSQR---------QTDEEFLELASTISRLRHGNIVELIGY 506 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~~----~g~~vavK~l~~~~~~~---------~~~~~~~~e~~~l~~l~H~niv~l~~~ 506 (720)
++|...+.||+|+||+||+|... ++..||||++....... ...+.+.+|+..++.++||||++++++
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~ 116 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS 116 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence 56888899999999999999764 57889999987542211 122357788899999999999999999
Q ss_pred ecc----CCeEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCC
Q 004994 507 CNE----HGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKL 582 (720)
Q Consensus 507 ~~~----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~ 582 (720)
+.. ....++||||+ +++|.+++... ..+++..+..++.|+++||+|||+. +|+||||||+|||++.++
T Consensus 117 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~----~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~ 188 (345)
T 2v62_A 117 GLTEFKGRSYRFMVMERL-GIDLQKISGQN----GTFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLGYKN 188 (345)
T ss_dssp EEEESSSCEEEEEEEECE-EEEHHHHCBGG----GBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEESSS
T ss_pred cccccCCCcEEEEEEecc-CCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEccCC
Confidence 877 67899999999 99999998532 3789999999999999999999997 999999999999999887
Q ss_pred --CeEEccccCCCCCCCCCCc-----ccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccc
Q 004994 583 --IVRVSDCGLAPLLFSGSTN-----ELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGE 654 (720)
Q Consensus 583 --~~kl~DFGla~~~~~~~~~-----~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~ 654 (720)
.+||+|||+++.+...... .......++..|+|||.. ...++.++|||||||++|||+||+.||........
T Consensus 189 ~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~ 268 (345)
T 2v62_A 189 PDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPV 268 (345)
T ss_dssp TTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHH
T ss_pred CCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccH
Confidence 9999999999876432211 111345688999999998 55689999999999999999999999954221111
Q ss_pred c--chhhhcccccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 655 Q--SLVRWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 655 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
. .........+.. .+..... ....+.++.+++.+||+.||++|||+++|++.|+++
T Consensus 269 ~~~~~~~~~~~~~~~--~~~~~~~-------~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~ 326 (345)
T 2v62_A 269 AVQTAKTNLLDELPQ--SVLKWAP-------SGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPH 326 (345)
T ss_dssp HHHHHHHHHHHTTTH--HHHHHSC-------TTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTT
T ss_pred HHHHHHHhhcccccH--HHHhhcc-------ccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhcc
Confidence 0 000000000000 0000000 002345789999999999999999999999999864
No 171
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.6e-39 Score=349.80 Aligned_cols=263 Identities=19% Similarity=0.277 Sum_probs=195.2
Q ss_pred hcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccC------C
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEH------G 511 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~------~ 511 (720)
.+.|...+.||+|+||.||+|.. .+|+.||||++..........+.+.+|++++++++||||+++++++... .
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 45788889999999999999965 5799999999976544455567889999999999999999999999765 3
Q ss_pred eEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccC
Q 004994 512 QHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGL 591 (720)
Q Consensus 512 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGl 591 (720)
..++||||+ +++|.+++.. ..+++.....++.|+++||.|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~-----~~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 174 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKH-----EKLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGL 174 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred eEEEEEecC-CCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEeeec
Confidence 469999999 7799998853 4588899999999999999999997 999999999999999999999999999
Q ss_pred CCCCCCCCCcccccCccccccCCCCccC-C-CCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhccc------
Q 004994 592 APLLFSGSTNELSEGLLTAHGSGAPEFE-S-GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIP------ 663 (720)
Q Consensus 592 a~~~~~~~~~~~~~~~~~~~~~~aPE~~-~-~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~------ 663 (720)
++..... .....++.+|+|||.+ . ..++.++|||||||++|||++|+.||...........+.....
T Consensus 175 a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~ 249 (367)
T 1cm8_A 175 ARQADSE-----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEF 249 (367)
T ss_dssp CEECCSS-----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHH
T ss_pred ccccccc-----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHH
Confidence 9875322 2235678999999987 3 5799999999999999999999999976443221111100000
Q ss_pred --ccCchh--hhhhhcCCCCC---chhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 664 --RLHDID--ALSRMVDPSLD---GAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 664 --~~~~~~--~~~~~~~~~~~---~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.+.... .....+..... .......++.+.+|+.+||+.||++|||++|+++|
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~h 308 (367)
T 1cm8_A 250 VQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH 308 (367)
T ss_dssp HHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcC
Confidence 000000 00000000000 01112234678899999999999999999999975
No 172
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=8.9e-40 Score=347.98 Aligned_cols=252 Identities=23% Similarity=0.299 Sum_probs=196.5
Q ss_pred HhcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHcc-CCCceeEEEeEeccCCeEEE
Q 004994 438 YTNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRL-RHGNIVELIGYCNEHGQHLL 515 (720)
Q Consensus 438 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~l 515 (720)
+.++|...+.||+|+||+||+|.. .+|+.||||++.+... .+.+|++++.++ +||||+++++++.+.+..++
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~------~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~l 93 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR------DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYV 93 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC------CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEE
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC------ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEE
Confidence 556788899999999999999965 4689999999975432 234677888877 79999999999999999999
Q ss_pred EEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCC----CCeEEccccC
Q 004994 516 VYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEK----LIVRVSDCGL 591 (720)
Q Consensus 516 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~----~~~kl~DFGl 591 (720)
||||+++|+|.+++.. ...+++.....++.+++.||+|||+. +|+||||||+|||+.++ +.+||+|||+
T Consensus 94 v~E~~~gg~L~~~i~~----~~~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~ 166 (342)
T 2qr7_A 94 VTELMKGGELLDKILR----QKFFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGF 166 (342)
T ss_dssp EECCCCSCBHHHHHHT----CTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEECCCTT
T ss_pred EEeCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEEEECCC
Confidence 9999999999998853 34689999999999999999999997 99999999999998543 3599999999
Q ss_pred CCCCCCCCCcccccCccccccCCCCccCC-CCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhh
Q 004994 592 APLLFSGSTNELSEGLLTAHGSGAPEFES-GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDA 670 (720)
Q Consensus 592 a~~~~~~~~~~~~~~~~~~~~~~aPE~~~-~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~ 670 (720)
++....... ......++..|+|||.+. ..|+.++|||||||++|||++|+.||..........+.....
T Consensus 167 a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~-------- 236 (342)
T 2qr7_A 167 AKQLRAENG--LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIG-------- 236 (342)
T ss_dssp CEECBCTTC--CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHH--------
T ss_pred cccCcCCCC--ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHc--------
Confidence 987643321 223356789999999984 458999999999999999999999997532211111111000
Q ss_pred hhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 671 LSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 671 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
. -.......+....+.++.+++.+||+.||++|||++|++++
T Consensus 237 -~--~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~h 278 (342)
T 2qr7_A 237 -S--GKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRH 278 (342)
T ss_dssp -H--CCCCCCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred -c--CCcccCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0 00111111222344678899999999999999999999875
No 173
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=1.5e-39 Score=357.82 Aligned_cols=201 Identities=21% Similarity=0.287 Sum_probs=168.0
Q ss_pred hcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccC-----Ce
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEH-----GQ 512 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~-----~~ 512 (720)
.++|...+.||+|+||+||+|.. .+|+.||||++..........+.+.+|++++++++||||+++++++... +.
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 46788899999999999999965 5689999999986555555667899999999999999999999999765 57
Q ss_pred EEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCC
Q 004994 513 HLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLA 592 (720)
Q Consensus 513 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla 592 (720)
.|+||||++ ++|.+++.. ...+++..+..++.|+++||.|||+. +|+||||||+|||++.++.+||+|||+|
T Consensus 105 ~~lv~e~~~-~~L~~~~~~----~~~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFGla 176 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFKT----PIFLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLA 176 (432)
T ss_dssp EEEEEECCS-EEHHHHHHS----SCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEecCC-cCHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCCCc
Confidence 899999987 599998853 34689999999999999999999998 9999999999999999999999999999
Q ss_pred CCCCCCCCc--------------------ccccCccccccCCCCccC--CCCCCCccchHhHHHHHHHHHhCCCCCC
Q 004994 593 PLLFSGSTN--------------------ELSEGLLTAHGSGAPEFE--SGSYSCQSDVYSLGVVMLELLTGRKPYD 647 (720)
Q Consensus 593 ~~~~~~~~~--------------------~~~~~~~~~~~~~aPE~~--~~~~~~~~Dv~S~Gvvl~elltG~~Pf~ 647 (720)
+........ .......+|++|+|||.+ ...|+.++|||||||++|||++|..||.
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 177 RTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp EEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred ccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 876432211 112446689999999975 4569999999999999999999666553
No 174
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=6.4e-40 Score=349.49 Aligned_cols=256 Identities=23% Similarity=0.332 Sum_probs=197.2
Q ss_pred HhcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHH-HHccCCCceeEEEeEeccCCeEEE
Q 004994 438 YTNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELAST-ISRLRHGNIVELIGYCNEHGQHLL 515 (720)
Q Consensus 438 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~-l~~l~H~niv~l~~~~~~~~~~~l 515 (720)
..++|...+.||+|+||+||+|.. .+|+.||||++....... ...++..|..+ ++.++||||+++++++.+.+..++
T Consensus 49 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~l 127 (340)
T 3an0_A 49 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQ-EQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWI 127 (340)
T ss_dssp CSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCH-HHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEE
T ss_pred ehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcH-HHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEE
Confidence 346788889999999999999965 679999999997654332 33445555554 788899999999999999999999
Q ss_pred EEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCC
Q 004994 516 VYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLL 595 (720)
Q Consensus 516 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~ 595 (720)
||||+++ +|.+++.........+++..+..++.++++||+|||+. .+|+||||||+|||++.++.+||+|||+++.+
T Consensus 128 v~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~--~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~ 204 (340)
T 3an0_A 128 CMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK--LSVIHRDVKPSNVLINALGQVKMCDFGISGYL 204 (340)
T ss_dssp EECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHH--TCCCCCSCCSTTEEECSTTCEEECCCSHHHHH
T ss_pred EHHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhc--CCeecCCCCHHHEEECCCCCEEEeeCCCceec
Confidence 9999986 99988865433456799999999999999999999974 28999999999999999999999999999765
Q ss_pred CCCCCcccccCccccccCCCCccCC-----CCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhh
Q 004994 596 FSGSTNELSEGLLTAHGSGAPEFES-----GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDA 670 (720)
Q Consensus 596 ~~~~~~~~~~~~~~~~~~~aPE~~~-----~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~ 670 (720)
... .......++..|+|||.+. ..++.++|||||||++|||+||+.||........ .+..
T Consensus 205 ~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~-~~~~----------- 269 (340)
T 3an0_A 205 VDS---VAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQ-QLKQ----------- 269 (340)
T ss_dssp SCH---HHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHH-HHHH-----------
T ss_pred ccc---cccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchHH-HHHH-----------
Confidence 321 1112245788999999852 3588999999999999999999999975321110 0000
Q ss_pred hhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 671 LSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 671 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
......+... ....+.++.+++.+||+.||++|||+.|++++
T Consensus 270 ~~~~~~~~~~---~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 311 (340)
T 3an0_A 270 VVEEPSPQLP---ADKFSAEFVDFTSQCLKKNSKERPTYPELMQH 311 (340)
T ss_dssp HHHSCCCCCC---GGGSCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred HhcCCCCCCC---cccCCHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 0000011111 11234678899999999999999999999874
No 175
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=9.1e-40 Score=366.46 Aligned_cols=255 Identities=23% Similarity=0.313 Sum_probs=204.4
Q ss_pred hcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccc-cccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEE
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTV-SQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLV 516 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~-~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 516 (720)
.++|...++||+|+||+||+|.. .+|+.||||++.+.. ........+.+|++++++++|||||++++++.+.+..++|
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 262 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV 262 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence 35688889999999999999966 479999999997542 2234456788999999999999999999999999999999
Q ss_pred EeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCC
Q 004994 517 YDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLF 596 (720)
Q Consensus 517 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~ 596 (720)
|||+++|+|.+++.... ...+++..+..++.+++.||+|||+. +||||||||+|||++.++++||+|||+|+.+.
T Consensus 263 mEy~~gg~L~~~l~~~~--~~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DFGla~~~~ 337 (576)
T 2acx_A 263 LTLMNGGDLKFHIYHMG--QAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVP 337 (576)
T ss_dssp ECCCCSCBHHHHHHSSS--SCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEcCCCCcHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEecccceecc
Confidence 99999999999986432 34589999999999999999999997 99999999999999999999999999998764
Q ss_pred CCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhc
Q 004994 597 SGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMV 675 (720)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (720)
.... .....||+.|+|||.+ ...|+.++|||||||++|||++|+.||...........+.. .+. ..
T Consensus 338 ~~~~---~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~---------~i~-~~ 404 (576)
T 2acx_A 338 EGQT---IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVER---------LVK-EV 404 (576)
T ss_dssp TTCC---EECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHH---------HHH-HC
T ss_pred cCcc---ccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHH---------Hhh-cc
Confidence 3321 2235789999999998 44689999999999999999999999976432211110100 000 00
Q ss_pred CCCCCchhhHHHHHHHHHHHHHHhccCCCCCC-----CHHHHHHH
Q 004994 676 DPSLDGAYLAKSLSRFADIISRCVQWEPGFRP-----PMSEIVQD 715 (720)
Q Consensus 676 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~evl~~ 715 (720)
... ++...+.++.+++.+||+.||++|| +++||++|
T Consensus 405 ~~~----~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~H 445 (576)
T 2acx_A 405 PEE----YSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEH 445 (576)
T ss_dssp CCC----CCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred ccc----CCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhC
Confidence 111 1122346788999999999999999 78998865
No 176
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=1.8e-39 Score=339.30 Aligned_cols=257 Identities=24% Similarity=0.359 Sum_probs=198.2
Q ss_pred cCCCCCCeeccCCCceEEEEEeCC----CcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEec-cCCeEE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAELPG----GKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCN-EHGQHL 514 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~~~----g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~-~~~~~~ 514 (720)
..|...+.||+|+||+||+|...+ ...||+|.+.... .....+.+.+|++++++++||||+++++++. ..+..+
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 103 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT-DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 103 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCC-SHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCE
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCC-CHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceE
Confidence 356777899999999999997532 2368999987532 3345578999999999999999999999864 456889
Q ss_pred EEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCC
Q 004994 515 LVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPL 594 (720)
Q Consensus 515 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~ 594 (720)
+||||+++|+|.+++... ...+++..+..++.++++||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 104 ~v~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~ 177 (298)
T 3f66_A 104 VVLPYMKHGDLRNFIRNE---THNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARD 177 (298)
T ss_dssp EEEECCTTCBHHHHHHCT---TCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSCGGGCC
T ss_pred EEEeCCCCCCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECccccccc
Confidence 999999999999999642 35678899999999999999999997 999999999999999999999999999987
Q ss_pred CCCCCCc--ccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcccccCchhh
Q 004994 595 LFSGSTN--ELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDA 670 (720)
Q Consensus 595 ~~~~~~~--~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~ 670 (720)
....... .......++..|+|||.. ...++.++||||||+++|||++ |.+||.............
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~----------- 246 (298)
T 3f66_A 178 MYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL----------- 246 (298)
T ss_dssp CSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHH-----------
T ss_pred ccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHh-----------
Confidence 6433211 112234567789999988 5678999999999999999999 566665433221110000
Q ss_pred hhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhC
Q 004994 671 LSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCMI 720 (720)
Q Consensus 671 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~ 720 (720)
....... +...+..+.+++.+||+.||++|||++|+++.|++++
T Consensus 247 --~~~~~~~----~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~ 290 (298)
T 3f66_A 247 --QGRRLLQ----PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIF 290 (298)
T ss_dssp --TTCCCCC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred --cCCCCCC----CccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 0000000 1112356889999999999999999999999999863
No 177
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=5.2e-40 Score=346.51 Aligned_cols=261 Identities=21% Similarity=0.265 Sum_probs=200.9
Q ss_pred hcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEec----cCCeE
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCN----EHGQH 513 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~----~~~~~ 513 (720)
.++|...+.||+|+||.||+|.. .+|+.||||++... .....+.+.+|++++++++||||+++++++. .....
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 105 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCH--EQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEA 105 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEES--SHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecC--CHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCcee
Confidence 46788899999999999999965 67999999998643 2345678899999999999999999999986 34478
Q ss_pred EEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCC
Q 004994 514 LLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAP 593 (720)
Q Consensus 514 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~ 593 (720)
++||||+++|+|.+++.........+++..+..++.++++||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 106 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~~~ 182 (317)
T 2buj_A 106 WLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSMN 182 (317)
T ss_dssp EEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSSCE
T ss_pred EEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCcch
Confidence 999999999999999975433456789999999999999999999997 99999999999999999999999999987
Q ss_pred CCCCCCCcc-------cccCccccccCCCCccCCCC----CCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcc
Q 004994 594 LLFSGSTNE-------LSEGLLTAHGSGAPEFESGS----YSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAI 662 (720)
Q Consensus 594 ~~~~~~~~~-------~~~~~~~~~~~~aPE~~~~~----~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~ 662 (720)
......... ......++..|+|||.+.+. ++.++|||||||++|||++|+.||........ .....
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~-~~~~~-- 259 (317)
T 2buj_A 183 QACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGD-SVALA-- 259 (317)
T ss_dssp ESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTS-CHHHH--
T ss_pred hcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccc-hhhHH--
Confidence 653211000 00123458899999998432 68899999999999999999999953111000 00000
Q ss_pred cccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 663 PRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
........ .....+.++.+++.+||+.||.+|||++|++++|+.+
T Consensus 260 --------~~~~~~~~----~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~ 304 (317)
T 2buj_A 260 --------VQNQLSIP----QSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEAL 304 (317)
T ss_dssp --------HHCC--CC----CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHT
T ss_pred --------hhccCCCC----ccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhc
Confidence 00000000 0112235788999999999999999999999999875
No 178
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=1.4e-39 Score=344.89 Aligned_cols=263 Identities=17% Similarity=0.226 Sum_probs=206.1
Q ss_pred CHHHHHHHhcCCCCC-CeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHcc-CCCceeEEEeEe
Q 004994 431 TIASLQQYTNSFSEG-NFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRL-RHGNIVELIGYC 507 (720)
Q Consensus 431 ~~~~~~~~~~~~~~~-~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~ 507 (720)
-+.....+.+.|... +.||+|+||+||+|.. .+|+.||||++............+.+|+.+++++ +||||+++++++
T Consensus 19 ~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~ 98 (327)
T 3lm5_A 19 YFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVY 98 (327)
T ss_dssp CSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEE
T ss_pred HHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEE
Confidence 344455667777776 8899999999999965 4699999999986655556678899999999999 569999999999
Q ss_pred ccCCeEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcC---CCCe
Q 004994 508 NEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDE---KLIV 584 (720)
Q Consensus 508 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~---~~~~ 584 (720)
.+.+..++||||+++|+|.+++... ....+++..+..++.+++.||+|||+. +|+||||||+|||++. ++.+
T Consensus 99 ~~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~~~~~~ 173 (327)
T 3lm5_A 99 ENTSEIILILEYAAGGEIFSLCLPE--LAEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDI 173 (327)
T ss_dssp ECSSEEEEEEECCTTEEGGGGGSSC--C-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBTTBCCE
T ss_pred EeCCeEEEEEEecCCCcHHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCCCCCcE
Confidence 9999999999999999999988542 235689999999999999999999997 9999999999999998 7899
Q ss_pred EEccccCCCCCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhccc
Q 004994 585 RVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIP 663 (720)
Q Consensus 585 kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~ 663 (720)
||+|||+++...... ......+++.|+|||.+ ...++.++|||||||++|||+||+.||...........+...
T Consensus 174 kL~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~-- 248 (327)
T 3lm5_A 174 KIVDFGMSRKIGHAC---ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQV-- 248 (327)
T ss_dssp EECCGGGCEEC------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT--
T ss_pred EEeeCccccccCCcc---ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHhc--
Confidence 999999998764322 12335688999999998 457899999999999999999999999754322111101000
Q ss_pred ccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 664 RLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 664 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
............+..+.+++.+||+.||++|||++|++++
T Consensus 249 ------------~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h 288 (327)
T 3lm5_A 249 ------------NVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSH 288 (327)
T ss_dssp ------------CCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred ------------ccccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCC
Confidence 0001111112234678899999999999999999999875
No 179
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=3.5e-39 Score=334.32 Aligned_cols=253 Identities=21% Similarity=0.308 Sum_probs=200.5
Q ss_pred hcCCCCCCeeccCCCceEEEEEeC-CCcEEEEEEecccccc----cccHHHHHHHHHHHHccCCCceeEEEeEeccCCeE
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQ----RQTDEEFLELASTISRLRHGNIVELIGYCNEHGQH 513 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~----~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~ 513 (720)
.++|...+.||+|+||.||+|... +|+.||+|++...... ....+.+.+|++++++++||||+++++++.+.+..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 83 (283)
T 3bhy_A 4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDV 83 (283)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeE
Confidence 356788899999999999999765 6899999998754322 12467899999999999999999999999999999
Q ss_pred EEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCC----CeEEccc
Q 004994 514 LLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKL----IVRVSDC 589 (720)
Q Consensus 514 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~----~~kl~DF 589 (720)
++||||+++++|.+++.. ...+++..+..++.++++||.|||+. +|+||||||+||+++.++ .+||+||
T Consensus 84 ~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~~kl~df 156 (283)
T 3bhy_A 84 VLILELVSGGELFDFLAE----KESLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDF 156 (283)
T ss_dssp EEEEECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCCEEECCC
T ss_pred EEEEeecCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCceEEEec
Confidence 999999999999999853 35689999999999999999999997 999999999999998877 8999999
Q ss_pred cCCCCCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCch
Q 004994 590 GLAPLLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDI 668 (720)
Q Consensus 590 Gla~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~ 668 (720)
|++....... ......++..|+|||.. .+.++.++||||||+++|||++|+.||...........+..
T Consensus 157 g~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-------- 225 (283)
T 3bhy_A 157 GIAHKIEAGN---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISA-------- 225 (283)
T ss_dssp TTCEECC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHT--------
T ss_pred ccceeccCCC---cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhHh--------
Confidence 9998664322 12234578899999988 45789999999999999999999999975432111100000
Q ss_pred hhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 669 DALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 669 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.............+..+.+++.+||+.||++|||+.|++++
T Consensus 226 ------~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 266 (283)
T 3bhy_A 226 ------VNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEH 266 (283)
T ss_dssp ------TCCCCCHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHC
T ss_pred ------cccCCcchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhC
Confidence 01111111222334678899999999999999999999974
No 180
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=5.7e-39 Score=346.27 Aligned_cols=264 Identities=17% Similarity=0.223 Sum_probs=193.1
Q ss_pred hcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCC------
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHG------ 511 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~------ 511 (720)
.++|...+.||+|+||.||+|.. .+++.||||++..........+.+.+|+++++.++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 46788899999999999999964 57899999999765444455678899999999999999999999997654
Q ss_pred eEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccC
Q 004994 512 QHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGL 591 (720)
Q Consensus 512 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGl 591 (720)
..++||||+++ +|.+.+. ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 104 ~~~lv~e~~~~-~l~~~~~------~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 173 (371)
T 2xrw_A 104 DVYIVMELMDA-NLCQVIQ------MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGL 173 (371)
T ss_dssp EEEEEEECCSE-EHHHHHH------SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCCC
T ss_pred ceEEEEEcCCC-CHHHHHh------hccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEeec
Confidence 78999999985 7877774 3478889999999999999999997 999999999999999999999999999
Q ss_pred CCCCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccc-hhhhcc-------
Q 004994 592 APLLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQS-LVRWAI------- 662 (720)
Q Consensus 592 a~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~-~~~~~~------- 662 (720)
++..... .......++..|+|||.+ ...++.++|||||||++|||++|+.||.......... +.....
T Consensus 174 a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 250 (371)
T 2xrw_A 174 ARTAGTS---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFM 250 (371)
T ss_dssp -------------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHH
T ss_pred ccccccc---cccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHH
Confidence 9866322 122335678999999998 4568999999999999999999999997643221110 000000
Q ss_pred cccCch-------------hhhhhhcCCC---CCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 663 PRLHDI-------------DALSRMVDPS---LDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 663 ~~~~~~-------------~~~~~~~~~~---~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
..+... .......... ...........++.+|+.+||+.||++|||++|++++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 319 (371)
T 2xrw_A 251 KKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 319 (371)
T ss_dssp TTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred HHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence 000000 0000000000 0111223346789999999999999999999999975
No 181
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=9.1e-40 Score=365.45 Aligned_cols=254 Identities=23% Similarity=0.350 Sum_probs=205.8
Q ss_pred HhcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEeccccc-ccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEE
Q 004994 438 YTNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVS-QRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLL 515 (720)
Q Consensus 438 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~l 515 (720)
+.++|...+.||+|+||+||+|.. .+|+.||||++..... .....+.+.+|++++++++|||||++++++.+.+..++
T Consensus 24 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 103 (484)
T 3nyv_A 24 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYL 103 (484)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 346788889999999999999966 4799999999965432 24456789999999999999999999999999999999
Q ss_pred EEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEE---cCCCCeEEccccCC
Q 004994 516 VYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILL---DEKLIVRVSDCGLA 592 (720)
Q Consensus 516 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl---~~~~~~kl~DFGla 592 (720)
||||+.+|+|.+.+.. ...+++..+..++.+++.||.|||+. +|+||||||+|||+ +.++.+||+|||++
T Consensus 104 v~e~~~~~~L~~~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a 176 (484)
T 3nyv_A 104 VGEVYTGGELFDEIIS----RKRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS 176 (484)
T ss_dssp EECCCCSCBHHHHHHT----CSCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCTTHH
T ss_pred EEecCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEEEeeeee
Confidence 9999999999998854 34689999999999999999999997 99999999999999 56789999999999
Q ss_pred CCCCCCCCcccccCccccccCCCCccCCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhh
Q 004994 593 PLLFSGSTNELSEGLLTAHGSGAPEFESGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALS 672 (720)
Q Consensus 593 ~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (720)
+.+.... ......++++|+|||.+.+.|+.++|||||||++|||++|+.||...........+...
T Consensus 177 ~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~----------- 242 (484)
T 3nyv_A 177 THFEASK---KMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKG----------- 242 (484)
T ss_dssp HHBCCCC---SHHHHTTGGGTCCHHHHHTCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC-----------
T ss_pred EEccccc---ccccCCCCccccCceeecCCCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcC-----------
Confidence 8764332 12235688999999999888999999999999999999999999754322111111000
Q ss_pred hhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 673 RMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 673 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
............++++.+++.+||+.||++|||++|+++|
T Consensus 243 ---~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 282 (484)
T 3nyv_A 243 ---KYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDH 282 (484)
T ss_dssp ---CCCCCSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred ---CCCCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhhC
Confidence 0000111122344678899999999999999999999875
No 182
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=3.3e-39 Score=336.63 Aligned_cols=250 Identities=22% Similarity=0.323 Sum_probs=201.7
Q ss_pred hcCCCCCCeeccCCCceEEEEEeC-CCcEEEEEEeccccc-ccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEE
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVS-QRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLV 516 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 516 (720)
.++|...+.||+|+||.||+|... +++.||+|++..... .....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 93 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 93 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence 356778899999999999999664 688999999875432 234457789999999999999999999999999999999
Q ss_pred EeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCC
Q 004994 517 YDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLF 596 (720)
Q Consensus 517 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~ 596 (720)
|||+++++|.+++.. ...+++..+..++.++++||.|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 94 ~e~~~~~~L~~~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~ 166 (294)
T 2rku_A 94 LELCRRRSLLELHKR----RKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE 166 (294)
T ss_dssp EECCTTCBHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EecCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEeccCceecc
Confidence 999999999998742 35689999999999999999999997 99999999999999999999999999998764
Q ss_pred CCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhc
Q 004994 597 SGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMV 675 (720)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (720)
.... ......++..|+|||.. ...++.++||||||+++|||+||+.||.......... .+.
T Consensus 167 ~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~----------------~~~ 228 (294)
T 2rku_A 167 YDGE--RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYL----------------RIK 228 (294)
T ss_dssp STTC--CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH----------------HHH
T ss_pred cCcc--ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH----------------HHh
Confidence 3221 22335678899999998 4468999999999999999999999997543211110 000
Q ss_pred CCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 676 DPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 676 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
..... .+......+.+++.+||+.||++|||++|++++
T Consensus 229 ~~~~~--~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 229 KNEYS--IPKHINPVAASLIQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp TTCCC--CCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred hccCC--CccccCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 00000 011223567899999999999999999999875
No 183
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=4.7e-39 Score=335.56 Aligned_cols=261 Identities=20% Similarity=0.260 Sum_probs=201.9
Q ss_pred HhcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEe-ccCCeEEE
Q 004994 438 YTNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYC-NEHGQHLL 515 (720)
Q Consensus 438 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~-~~~~~~~l 515 (720)
..++|...+.||+|+||+||+|.. .+|+.||||++..... .+.+.+|+++++.++|++++..++++ .+.+..++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~l 82 (296)
T 3uzp_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK----HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVM 82 (296)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS----CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEE
T ss_pred eccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc----hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEE
Confidence 356788899999999999999965 6799999999864322 23688999999999998876666655 56778899
Q ss_pred EEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEE---cCCCCeEEccccCC
Q 004994 516 VYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILL---DEKLIVRVSDCGLA 592 (720)
Q Consensus 516 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl---~~~~~~kl~DFGla 592 (720)
||||+ +++|.+++.. ....+++..+..++.++++||+|||+. +|+||||||+|||+ ++++.+||+|||++
T Consensus 83 v~e~~-~~~L~~~~~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~ 155 (296)
T 3uzp_A 83 VMELL-GPSLEDLFNF---CSRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLA 155 (296)
T ss_dssp EEECC-CCBHHHHHHH---TTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCTTC
T ss_pred EEEec-CCCHHHHHHh---hccCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeCCCc
Confidence 99999 8899999853 234689999999999999999999997 99999999999999 58899999999999
Q ss_pred CCCCCCCCcc-----cccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccC
Q 004994 593 PLLFSGSTNE-----LSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLH 666 (720)
Q Consensus 593 ~~~~~~~~~~-----~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~ 666 (720)
+......... ......++..|+|||.. ...++.++|||||||++|||+||+.||................
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~---- 231 (296)
T 3uzp_A 156 KKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERIS---- 231 (296)
T ss_dssp EECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHH----
T ss_pred ccccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhc----
Confidence 8765433211 12345688999999998 4578999999999999999999999997643322111111000
Q ss_pred chhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 667 DIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
. .. ...+ ........++++.+++.+||+.||++|||++|+++.|+++
T Consensus 232 ~-~~---~~~~--~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~ 278 (296)
T 3uzp_A 232 E-KK---MSTP--IEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNL 278 (296)
T ss_dssp H-HH---HHSC--HHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHH
T ss_pred c-cc---cCCc--hHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHH
Confidence 0 00 0000 0001112346788999999999999999999999999876
No 184
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=6.7e-39 Score=343.18 Aligned_cols=269 Identities=20% Similarity=0.292 Sum_probs=200.4
Q ss_pred cCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEecc--------C
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNE--------H 510 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~--------~ 510 (720)
++|...+.||+|+||+||+|.. .+|+.||||++............+.+|++++++++||||+++++++.. .
T Consensus 17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 96 (351)
T 3mi9_A 17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK 96 (351)
T ss_dssp GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------
T ss_pred cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCC
Confidence 5688889999999999999966 679999999997655444555678899999999999999999999876 4
Q ss_pred CeEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEcccc
Q 004994 511 GQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCG 590 (720)
Q Consensus 511 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFG 590 (720)
+..++||||+++ +|.+.+... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 97 ~~~~lv~e~~~~-~l~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg 169 (351)
T 3mi9_A 97 GSIYLVFDFCEH-DLAGLLSNV---LVKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFG 169 (351)
T ss_dssp CEEEEEEECCSE-EHHHHHHCT---TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCT
T ss_pred ceEEEEEeccCC-CHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEccch
Confidence 568999999986 777776532 34589999999999999999999997 99999999999999999999999999
Q ss_pred CCCCCCCCCC--cccccCccccccCCCCccCC--CCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhccccc-
Q 004994 591 LAPLLFSGST--NELSEGLLTAHGSGAPEFES--GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRL- 665 (720)
Q Consensus 591 la~~~~~~~~--~~~~~~~~~~~~~~aPE~~~--~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~- 665 (720)
+++.+..... ........++.+|+|||.+. ..++.++|||||||++|||+||+.||...........+.......
T Consensus 170 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~ 249 (351)
T 3mi9_A 170 LARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSIT 249 (351)
T ss_dssp TCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCC
T ss_pred hcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCC
Confidence 9987643221 11223456789999999874 358999999999999999999999997644322111111100000
Q ss_pred ----Cchh---hhhhhcCCCC-CchhhHH-----HHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 666 ----HDID---ALSRMVDPSL-DGAYLAK-----SLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 666 ----~~~~---~~~~~~~~~~-~~~~~~~-----~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.... ....+..... ....... ..+.+.+|+.+||+.||++|||++|++++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 312 (351)
T 3mi9_A 250 PEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 312 (351)
T ss_dssp TTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence 0000 0000000000 0000000 13568899999999999999999999875
No 185
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=3.1e-39 Score=343.47 Aligned_cols=250 Identities=22% Similarity=0.320 Sum_probs=202.2
Q ss_pred hcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEeccccc-ccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEE
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVS-QRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLV 516 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 516 (720)
.++|...+.||+|+||.||++.. .+++.||+|++..... .....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 119 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 119 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 35688889999999999999966 4688999999875432 234557789999999999999999999999999999999
Q ss_pred EeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCC
Q 004994 517 YDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLF 596 (720)
Q Consensus 517 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~ 596 (720)
|||+++++|.+++.. ...+++..+..++.++++||.|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 120 ~e~~~~~~L~~~~~~----~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 192 (335)
T 2owb_A 120 LELCRRRSLLELHKR----RKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE 192 (335)
T ss_dssp ECCCTTCBHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EecCCCCCHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeeccCceecc
Confidence 999999999998743 35689999999999999999999997 99999999999999999999999999998764
Q ss_pred CCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhc
Q 004994 597 SGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMV 675 (720)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (720)
.... ......++..|+|||.+ ...++.++|||||||++|||++|+.||...........+.. .
T Consensus 193 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~--------------~ 256 (335)
T 2owb_A 193 YDGE--RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKK--------------N 256 (335)
T ss_dssp STTC--CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHH--------------T
T ss_pred cCcc--cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHhc--------------C
Confidence 3221 22345678899999998 55689999999999999999999999975332111100000 0
Q ss_pred CCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 676 DPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 676 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
...+. .....++.+++.+||+.||++|||++|++++
T Consensus 257 ~~~~~----~~~~~~~~~li~~~l~~dp~~Rps~~ell~~ 292 (335)
T 2owb_A 257 EYSIP----KHINPVAASLIQKMLQTDPTARPTINELLND 292 (335)
T ss_dssp CCCCC----TTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred CCCCC----ccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 00111 1123567899999999999999999999874
No 186
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=6.1e-39 Score=345.06 Aligned_cols=260 Identities=24% Similarity=0.332 Sum_probs=205.6
Q ss_pred HHHHHHHhcCCCCCCeeccCCCceEEEEEeC-CCcEEEEEEecccccc------cccHHHHHHHHHHHHcc-CCCceeEE
Q 004994 432 IASLQQYTNSFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQ------RQTDEEFLELASTISRL-RHGNIVEL 503 (720)
Q Consensus 432 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~------~~~~~~~~~e~~~l~~l-~H~niv~l 503 (720)
......+.++|...+.||+|+||.||+|... +|+.||||++...... ....+.+.+|+++++++ +||||+++
T Consensus 86 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~ 165 (365)
T 2y7j_A 86 WAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITL 165 (365)
T ss_dssp HHHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCE
T ss_pred chhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEE
Confidence 3444566788999999999999999999764 7999999998754321 11245688999999999 89999999
Q ss_pred EeEeccCCeEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCC
Q 004994 504 IGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLI 583 (720)
Q Consensus 504 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~ 583 (720)
++++...+..++||||+++++|.+++.. ...+++..+..++.+++.||.|||+. +|+||||||+|||++.++.
T Consensus 166 ~~~~~~~~~~~lv~e~~~g~~L~~~l~~----~~~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~~~~~ 238 (365)
T 2y7j_A 166 IDSYESSSFMFLVFDLMRKGELFDYLTE----KVALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQ 238 (365)
T ss_dssp EEEEEBSSEEEEEECCCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCC
T ss_pred EEEEeeCCEEEEEEEeCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCC
Confidence 9999999999999999999999999852 35689999999999999999999997 9999999999999999999
Q ss_pred eEEccccCCCCCCCCCCcccccCccccccCCCCccCC-------CCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccc
Q 004994 584 VRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFES-------GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQS 656 (720)
Q Consensus 584 ~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~-------~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~ 656 (720)
+||+|||++..+.... ......+++.|+|||++. ..++.++|||||||++|||+||+.||..........
T Consensus 239 ikl~DfG~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~ 315 (365)
T 2y7j_A 239 IRLSDFGFSCHLEPGE---KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLR 315 (365)
T ss_dssp EEECCCTTCEECCTTC---CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH
T ss_pred EEEEecCcccccCCCc---ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHH
Confidence 9999999998764332 223456889999999862 247889999999999999999999996532211100
Q ss_pred hhhhcccccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 657 LVRWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 657 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.+.. . ............+..+.+++.+||+.||++|||++|++++
T Consensus 316 ~i~~------------~--~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 360 (365)
T 2y7j_A 316 MIME------------G--QYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQH 360 (365)
T ss_dssp HHHH------------T--CCCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHh------------C--CCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 0000 0 0000000111223568899999999999999999999975
No 187
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=1.1e-39 Score=350.42 Aligned_cols=266 Identities=20% Similarity=0.338 Sum_probs=201.3
Q ss_pred hcCCCCCCeeccCCCceEEEEEeC-CCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEE
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVY 517 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 517 (720)
.++|...+.||+|+||+||+|... +++.||+|++.... .....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 110 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI-KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM 110 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCC-CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEecccc-CHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEE
Confidence 356888899999999999999664 78999999997543 2344578899999999999999999999999999999999
Q ss_pred eeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCC
Q 004994 518 DYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFS 597 (720)
Q Consensus 518 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~ 597 (720)
||+++++|.+++.. ...+++.....++.+++.||+|||+.+ +|+||||||+|||++.++.+||+|||+++....
T Consensus 111 e~~~~~~L~~~l~~----~~~~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 184 (360)
T 3eqc_A 111 EHMDGGSLDQVLKK----AGRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 184 (360)
T ss_dssp CCCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCCCHHHHH
T ss_pred ECCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEECCCCCEEEEECCCCccccc
Confidence 99999999999853 346889999999999999999999842 799999999999999999999999999865422
Q ss_pred CCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcc--------------
Q 004994 598 GSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAI-------------- 662 (720)
Q Consensus 598 ~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~-------------- 662 (720)
. ......++..|+|||.. ...++.++|||||||++|||+||+.||................
T Consensus 185 ~----~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (360)
T 3eqc_A 185 S----MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTP 260 (360)
T ss_dssp H----C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC-----------------
T ss_pred c----cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccC
Confidence 1 22335678999999998 4568999999999999999999999997543221110000000
Q ss_pred ------------cccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 663 ------------PRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 663 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
+.....+....+.............+.++.+|+.+||+.||++|||++|+++|
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 325 (360)
T 3eqc_A 261 GRPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH 325 (360)
T ss_dssp -------------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred CCcccccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence 00000000000000000000011234578899999999999999999999875
No 188
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=2.2e-40 Score=358.23 Aligned_cols=245 Identities=14% Similarity=0.185 Sum_probs=187.3
Q ss_pred hcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccc-cccccHHHHHHHH---HHHHccCCCceeEEE-------eE
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTV-SQRQTDEEFLELA---STISRLRHGNIVELI-------GY 506 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~-~~~~~~~~~~~e~---~~l~~l~H~niv~l~-------~~ 506 (720)
.++|...+.||+|+||+||+|.. .+|+.||||++.... ......+.+.+|+ +++++++|||||+++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 35677789999999999999975 579999999997432 2234557888999 556666899999998 55
Q ss_pred eccCC-----------------eEEEEEeeCCCCCHHHHhhccch---hccccCHHHHHHHHHHHHHHHHHHHhcCCCCe
Q 004994 507 CNEHG-----------------QHLLVYDYGGNCTLHDLLHSDEE---AHKKFSWNIRIRVALGAARALQYLQEVCEPPI 566 (720)
Q Consensus 507 ~~~~~-----------------~~~lv~e~~~~gsL~~~l~~~~~---~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~i 566 (720)
+.+.+ ..++||||+ +|+|.+++..... ....+++..+..++.|+++||+|||+. +|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GL 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---Ce
Confidence 55443 278999999 5799999964321 112355688889999999999999997 99
Q ss_pred eecCCCCCCeEEcCCCCeEEccccCCCCCCCCCCcccccCccccccCCCCccC-CC-----------CCCCccchHhHHH
Q 004994 567 VHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE-SG-----------SYSCQSDVYSLGV 634 (720)
Q Consensus 567 vHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~-----------~~~~~~Dv~S~Gv 634 (720)
|||||||+|||++.++.+||+|||+|+.... ......| ..|+|||.+ .. .++.++|||||||
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~-----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~ 301 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA-----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGL 301 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTC-----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecCC-----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHH
Confidence 9999999999999999999999999986422 1223456 899999998 33 5899999999999
Q ss_pred HHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 004994 635 VMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQ 714 (720)
Q Consensus 635 vl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 714 (720)
++|||+||+.||.......... . +... . ...++++.+++.+||+.||++|||+.|+++
T Consensus 302 il~elltg~~Pf~~~~~~~~~~---~-------------~~~~-~-----~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 359 (377)
T 3byv_A 302 VIYWIWCADLPITKDAALGGSE---W-------------IFRS-C-----KNIPQPVRALLEGFLRYPKEDRLLPLQAME 359 (377)
T ss_dssp HHHHHHHSSCCC------CCSG---G-------------GGSS-C-----CCCCHHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred HHHHHHHCCCCCcccccccchh---h-------------hhhh-c-----cCCCHHHHHHHHHHcCCCchhCCCHHHHhh
Confidence 9999999999996543221111 0 0000 0 012356889999999999999999999986
Q ss_pred H
Q 004994 715 D 715 (720)
Q Consensus 715 ~ 715 (720)
+
T Consensus 360 h 360 (377)
T 3byv_A 360 T 360 (377)
T ss_dssp S
T ss_pred C
Confidence 3
No 189
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.4e-39 Score=352.77 Aligned_cols=264 Identities=22% Similarity=0.304 Sum_probs=195.8
Q ss_pred HHhcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEecc------
Q 004994 437 QYTNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNE------ 509 (720)
Q Consensus 437 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~------ 509 (720)
...++|...+.||+|+||+||+|.. .+|+.||||++..... ...+|+++++.++|||||++++++..
T Consensus 4 ~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~------~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~ 77 (383)
T 3eb0_A 4 TSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR------YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEP 77 (383)
T ss_dssp --CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT------SCCHHHHHHTTCCCTTBCCEEEEEEEC-----
T ss_pred cccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc------hHHHHHHHHHHcCCCCccchhheeeecCcccc
Confidence 4567899999999999999999965 6799999999864421 22368999999999999999999843
Q ss_pred --------------------------------CCeEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHH
Q 004994 510 --------------------------------HGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQY 557 (720)
Q Consensus 510 --------------------------------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~ 557 (720)
....++||||++ |+|.+.+.........+++..+..++.|+++||+|
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~ 156 (383)
T 3eb0_A 78 KPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGF 156 (383)
T ss_dssp --------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH
Confidence 334889999999 48888876544445679999999999999999999
Q ss_pred HHhcCCCCeeecCCCCCCeEEc-CCCCeEEccccCCCCCCCCCCcccccCccccccCCCCccCCC--CCCCccchHhHHH
Q 004994 558 LQEVCEPPIVHGNFKSSNILLD-EKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFESG--SYSCQSDVYSLGV 634 (720)
Q Consensus 558 LH~~~~~~ivHrDlkp~NiLl~-~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~--~~~~~~Dv~S~Gv 634 (720)
||+. +|+||||||+|||++ .++.+||+|||+|+.+.... ......++..|+|||.+.+ .++.++|||||||
T Consensus 157 LH~~---gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~ 230 (383)
T 3eb0_A 157 IHSL---GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE---PSVAYICSRFYRAPELMLGATEYTPSIDLWSIGC 230 (383)
T ss_dssp HHTT---TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS---CCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHH
T ss_pred HHHC---cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC---CCcCcccCCCccCHHHhcCCCCCCcchhhhhHHH
Confidence 9987 999999999999998 68899999999998764332 2233567889999998733 5899999999999
Q ss_pred HHHHHHhCCCCCCCCCCccccc-hhhhcccccCchhhhhhh-------cCCCCC-----chhhHHHHHHHHHHHHHHhcc
Q 004994 635 VMLELLTGRKPYDRSRPRGEQS-LVRWAIPRLHDIDALSRM-------VDPSLD-----GAYLAKSLSRFADIISRCVQW 701 (720)
Q Consensus 635 vl~elltG~~Pf~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-------~~~~~~-----~~~~~~~~~~l~~l~~~cl~~ 701 (720)
++|||++|+.||......+... ++.... ....+....+ .-+... ...+...+.++.+|+.+||+.
T Consensus 231 il~ell~g~~pf~~~~~~~~~~~i~~~~g--~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~ 308 (383)
T 3eb0_A 231 VFGELILGKPLFSGETSIDQLVRIIQIMG--TPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRY 308 (383)
T ss_dssp HHHHHHHSSCSSCCSSHHHHHHHHHHHHC--CCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCS
T ss_pred HHHHHHhCCCCCCCCChHHHHHHHHHHhC--CCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccC
Confidence 9999999999997644322111 111000 0000000000 000000 011222346788999999999
Q ss_pred CCCCCCCHHHHHHH
Q 004994 702 EPGFRPPMSEIVQD 715 (720)
Q Consensus 702 dP~~RPt~~evl~~ 715 (720)
||++|||+.|+++|
T Consensus 309 dP~~R~t~~e~l~h 322 (383)
T 3eb0_A 309 EPDLRINPYEAMAH 322 (383)
T ss_dssp SGGGSCCHHHHHTS
T ss_pred ChhhCCCHHHHhcC
Confidence 99999999999864
No 190
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.2e-39 Score=346.45 Aligned_cols=254 Identities=19% Similarity=0.283 Sum_probs=183.8
Q ss_pred hcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccC-CCceeEEEeEe--------c
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLR-HGNIVELIGYC--------N 508 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~~~~--------~ 508 (720)
..+|...+.||+|+||.||+|.. .+++.||||++... .....+.+.+|+.+++++. ||||+++++++ .
T Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 104 (337)
T 3ll6_A 27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSN--EEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDT 104 (337)
T ss_dssp TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEES--SHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTT
T ss_pred CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCC--chHHHHHHHHHHHHHHHhccCCChhhcccccccccccccc
Confidence 45788889999999999999975 57899999998543 2344567899999999996 99999999998 3
Q ss_pred cCCeEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCC--eeecCCCCCCeEEcCCCCeEE
Q 004994 509 EHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPP--IVHGNFKSSNILLDEKLIVRV 586 (720)
Q Consensus 509 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~--ivHrDlkp~NiLl~~~~~~kl 586 (720)
.....++||||+. |+|.+++.... ....+++..+..++.+++.||+|||+. + |+||||||+|||++.++.+||
T Consensus 105 ~~~~~~lv~e~~~-g~L~~~l~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~~~~~~~kl 179 (337)
T 3ll6_A 105 GQAEFLLLTELCK-GQLVEFLKKME-SRGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLSNQGTIKL 179 (337)
T ss_dssp SSEEEEEEEECCS-EEHHHHHHHHH-TTCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEECTTSCEEB
T ss_pred CCceEEEEEEecC-CCHHHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEECCCCCEEE
Confidence 3456899999996 69998886422 234689999999999999999999987 6 999999999999999999999
Q ss_pred ccccCCCCCCCCCCcc----------cccCccccccCCCCccC----CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCc
Q 004994 587 SDCGLAPLLFSGSTNE----------LSEGLLTAHGSGAPEFE----SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPR 652 (720)
Q Consensus 587 ~DFGla~~~~~~~~~~----------~~~~~~~~~~~~aPE~~----~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~ 652 (720)
+|||+++......... ......++..|+|||.+ ...++.++|||||||++|||+||+.||......
T Consensus 180 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~ 259 (337)
T 3ll6_A 180 CDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKL 259 (337)
T ss_dssp CCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC------
T ss_pred ecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHH
Confidence 9999998765432211 11134578899999987 335788999999999999999999999653221
Q ss_pred cccchhhhcccccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 653 GEQSLVRWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 653 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
. ..... ..... .......+.+++.+||+.||++|||++|++++|+++
T Consensus 260 ~---~~~~~-------------~~~~~----~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~ 306 (337)
T 3ll6_A 260 R---IVNGK-------------YSIPP----HDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEI 306 (337)
T ss_dssp ----------------------CCCCT----TCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHH
T ss_pred H---hhcCc-------------ccCCc----ccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 1 00000 00000 001113467999999999999999999999999875
No 191
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=5.7e-39 Score=333.06 Aligned_cols=247 Identities=22% Similarity=0.352 Sum_probs=200.0
Q ss_pred cCCCCCCeeccCCCceEEEEEeC-CCcEEEEEEeccccc-ccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVS-QRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVY 517 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 517 (720)
++|...+.||+|+||.||+|... +++.||||++..... .....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 93 (284)
T 2vgo_A 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLML 93 (284)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEE
Confidence 56788899999999999999664 688999999864321 2234567899999999999999999999999999999999
Q ss_pred eeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCC
Q 004994 518 DYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFS 597 (720)
Q Consensus 518 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~ 597 (720)
||+++++|.+++.. ...+++.....++.++++||.|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 94 e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~ 166 (284)
T 2vgo_A 94 EFAPRGELYKELQK----HGRFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPS 166 (284)
T ss_dssp CCCTTEEHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCCTTCEECSS
T ss_pred EeCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecccccccCcc
Confidence 99999999999853 34688999999999999999999987 999999999999999999999999999876532
Q ss_pred CCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcC
Q 004994 598 GSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVD 676 (720)
Q Consensus 598 ~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (720)
.. .....++..|+|||.. ...++.++||||||+++|||++|+.||......... ..+..
T Consensus 167 ~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~----------------~~~~~ 226 (284)
T 2vgo_A 167 LR----RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETH----------------RRIVN 226 (284)
T ss_dssp SC----BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHH----------------HHHHT
T ss_pred cc----cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHH----------------HHHhc
Confidence 21 2335678899999998 456899999999999999999999999753321110 01111
Q ss_pred CCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 677 PSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 677 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
... ..+...+.++.+++.+||+.||.+|||++|++++
T Consensus 227 ~~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h 263 (284)
T 2vgo_A 227 VDL--KFPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEH 263 (284)
T ss_dssp TCC--CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTC
T ss_pred ccc--CCCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhhC
Confidence 000 0111223568899999999999999999999874
No 192
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=2.6e-39 Score=335.27 Aligned_cols=246 Identities=21% Similarity=0.316 Sum_probs=199.4
Q ss_pred HhcCCCCCCeeccCCCceEEEEEeC-CCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEecc-------
Q 004994 438 YTNSFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNE------- 509 (720)
Q Consensus 438 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~------- 509 (720)
+.++|...+.||+|+||.||+|... +|+.||+|++.... +.+.+|++++++++||||+++++++..
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 82 (284)
T 2a19_B 9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN------EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPET 82 (284)
T ss_dssp HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS------GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---
T ss_pred hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc------HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccc
Confidence 4567888999999999999999764 79999999996432 356789999999999999999998854
Q ss_pred ---------CCeEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcC
Q 004994 510 ---------HGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDE 580 (720)
Q Consensus 510 ---------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~ 580 (720)
....++||||+++++|.+++... ....+++..+..++.++++||.|||+. +|+||||||+|||++.
T Consensus 83 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~ 157 (284)
T 2a19_B 83 SSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKR--RGEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVD 157 (284)
T ss_dssp ------CCEEEEEEEEECCCCSCBHHHHHHHG--GGSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEE
T ss_pred ccccccccCcceEEEEEeccCCCCHHHHHhhc--cCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEcC
Confidence 34589999999999999999642 235689999999999999999999997 9999999999999999
Q ss_pred CCCeEEccccCCCCCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhh
Q 004994 581 KLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVR 659 (720)
Q Consensus 581 ~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~ 659 (720)
++.+||+|||+++....... .....++..|+|||.. ...++.++||||||+++|||++|..|+.... .
T Consensus 158 ~~~~kl~Dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~-----~--- 226 (284)
T 2a19_B 158 TKQVKIGDFGLVTSLKNDGK---RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETS-----K--- 226 (284)
T ss_dssp TTEEEECCCTTCEESSCCSC---CCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHH-----H---
T ss_pred CCCEEECcchhheecccccc---ccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHH-----H---
Confidence 99999999999987644321 2234578899999998 5678999999999999999999998874210 0
Q ss_pred hcccccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 660 WAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 660 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
............ ..+..+.+++.+||+.||++|||+.|++++|+.+
T Consensus 227 ----------~~~~~~~~~~~~----~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~ 272 (284)
T 2a19_B 227 ----------FFTDLRDGIISD----IFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVW 272 (284)
T ss_dssp ----------HHHHHHTTCCCT----TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ----------HHHHhhcccccc----cCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 000111111111 1224678999999999999999999999999865
No 193
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=1.1e-38 Score=329.41 Aligned_cols=249 Identities=22% Similarity=0.320 Sum_probs=193.6
Q ss_pred hcCCCCCCeeccCCCceEEEEEeC-CCcEEEEEEecccc-cccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEE
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTV-SQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLV 516 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~-~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 516 (720)
.++|...+.||+|+||.||+|... +|+.||||++.... ......+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV 89 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence 357888899999999999999765 79999999986432 1234456889999999999999999999999999999999
Q ss_pred EeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCC
Q 004994 517 YDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLF 596 (720)
Q Consensus 517 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~ 596 (720)
|||+++++|.+++.. ...+++..+..++.++++||.|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 90 ~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~ 162 (276)
T 2h6d_A 90 MEYVSGGELFDYICK----HGRVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMS 162 (276)
T ss_dssp EECCCSCBHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCCGGGCCC
T ss_pred EeccCCCcHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeecccccccC
Confidence 999999999999853 34688999999999999999999998 99999999999999999999999999998764
Q ss_pred CCCCcccccCccccccCCCCccCCCC-C-CCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhh
Q 004994 597 SGSTNELSEGLLTAHGSGAPEFESGS-Y-SCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRM 674 (720)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~aPE~~~~~-~-~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (720)
... ......++..|+|||...+. + +.++||||||+++|||++|+.||...........+. .-
T Consensus 163 ~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~-------------~~ 226 (276)
T 2h6d_A 163 DGE---FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIR-------------GG 226 (276)
T ss_dssp C----------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH-------------HC
T ss_pred CCc---ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhh-------------cC
Confidence 322 12234578899999998543 3 689999999999999999999996532211100000 00
Q ss_pred cCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 675 VDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 675 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.... +...+.++.+++.+||+.||++|||++|++++
T Consensus 227 -~~~~----~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 227 -VFYI----PEYLNRSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp -CCCC----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred -cccC----chhcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 0001 11123568899999999999999999999985
No 194
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.7e-39 Score=344.46 Aligned_cols=269 Identities=21% Similarity=0.306 Sum_probs=195.6
Q ss_pred HhcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEeccccccc---ccHHHHHHHHHHHHccCCCceeEEEeEeccCCeE
Q 004994 438 YTNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQR---QTDEEFLELASTISRLRHGNIVELIGYCNEHGQH 513 (720)
Q Consensus 438 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~ 513 (720)
..++|...+.||+|+||.||+|.. .+|+.||||++....... ...+.+.+|++++++++||||+++++++.+.+..
T Consensus 8 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 87 (346)
T 1ua2_A 8 RAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNI 87 (346)
T ss_dssp -----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCC
T ss_pred HhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCce
Confidence 456899999999999999999976 468999999997432211 1224688999999999999999999999999999
Q ss_pred EEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCC
Q 004994 514 LLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAP 593 (720)
Q Consensus 514 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~ 593 (720)
++||||+++ +|.+++... ...+++..+..++.++++||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 88 ~lv~e~~~~-~l~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~ 160 (346)
T 1ua2_A 88 SLVFDFMET-DLEVIIKDN---SLVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAK 160 (346)
T ss_dssp EEEEECCSE-EHHHHHTTC---CSSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGGS
T ss_pred EEEEEcCCC-CHHHHHHhc---CcCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEEEEecccce
Confidence 999999996 888887532 34678888999999999999999997 89999999999999999999999999998
Q ss_pred CCCCCCCcccccCccccccCCCCccCC--CCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccc-hhhh-cccc---cC
Q 004994 594 LLFSGSTNELSEGLLTAHGSGAPEFES--GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQS-LVRW-AIPR---LH 666 (720)
Q Consensus 594 ~~~~~~~~~~~~~~~~~~~~~aPE~~~--~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~-~~~~-~~~~---~~ 666 (720)
.+.... .......++..|+|||.+. ..++.++|||||||++|||++|..||.......... +... ..+. ..
T Consensus 161 ~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 238 (346)
T 1ua2_A 161 SFGSPN--RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWP 238 (346)
T ss_dssp TTTSCC--CCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSS
T ss_pred eccCCc--ccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhh
Confidence 764322 1223456789999999873 348999999999999999999999997643221111 0000 0000 00
Q ss_pred chhhhhhhcCC-CCCc----hhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 667 DIDALSRMVDP-SLDG----AYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 667 ~~~~~~~~~~~-~~~~----~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
+.....+.+.. .... ......+.++.+++.+||+.||++|||++|++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 239 DMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp STTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred hhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 00000000000 0000 0112234678999999999999999999999975
No 195
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=2.9e-39 Score=347.48 Aligned_cols=276 Identities=21% Similarity=0.250 Sum_probs=201.0
Q ss_pred cCHHHHHHHhcCCCCCCeeccCCCceEEEEEeCCCcEEEEEEecccccc---------cccHHHHHHHHHHHHccCCCce
Q 004994 430 FTIASLQQYTNSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQ---------RQTDEEFLELASTISRLRHGNI 500 (720)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~---------~~~~~~~~~e~~~l~~l~H~ni 500 (720)
...+++..+.++|...+.||+|+||.||+|...+|+.||||++...... ....+.+.+|++++++++||||
T Consensus 12 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i 91 (362)
T 3pg1_A 12 DLIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNI 91 (362)
T ss_dssp HHHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTB
T ss_pred HHHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCc
Confidence 3467788899999999999999999999998888999999998653221 1123789999999999999999
Q ss_pred eEEEeEec-----cCCeEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCC
Q 004994 501 VELIGYCN-----EHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSN 575 (720)
Q Consensus 501 v~l~~~~~-----~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~N 575 (720)
+++++++. .....++||||++ |+|.+.+... ...+++..+..++.+++.||.|||+. +|+||||||+|
T Consensus 92 v~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~N 164 (362)
T 3pg1_A 92 LGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQ---RIVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGN 164 (362)
T ss_dssp CCCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCT---TSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGG
T ss_pred cceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHH
Confidence 99999983 3447899999998 5888887632 34689999999999999999999997 99999999999
Q ss_pred eEEcCCCCeEEccccCCCCCCCCCCcccccCccccccCCCCccCC--CCCCCccchHhHHHHHHHHHhCCCCCCCCCCcc
Q 004994 576 ILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFES--GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRG 653 (720)
Q Consensus 576 iLl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~--~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~ 653 (720)
||++.++.+||+|||+++...... ......++..|+|||... ..++.++|||||||++|||++|+.||.......
T Consensus 165 Il~~~~~~~kl~Dfg~~~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~ 241 (362)
T 3pg1_A 165 ILLADNNDITICDFNLAREDTADA---NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYN 241 (362)
T ss_dssp EEECTTCCEEECCTTC------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH
T ss_pred EEEcCCCCEEEEecCccccccccc---ccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHH
Confidence 999999999999999997543222 223356788999999873 568999999999999999999999997643222
Q ss_pred ccc-hhhhcc-cccCc-----hhhhhhhcCCCC---C----chhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 654 EQS-LVRWAI-PRLHD-----IDALSRMVDPSL---D----GAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 654 ~~~-~~~~~~-~~~~~-----~~~~~~~~~~~~---~----~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
... +..... +...+ .......+.... . ........+.+.+++.+||+.||++|||++|++++
T Consensus 242 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 317 (362)
T 3pg1_A 242 QLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH 317 (362)
T ss_dssp HHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence 111 111000 00000 000000110000 0 01111234678899999999999999999999975
No 196
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=6.3e-39 Score=339.09 Aligned_cols=254 Identities=20% Similarity=0.264 Sum_probs=194.9
Q ss_pred HhcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEeccccc------ccccHHHHHHHHHHHHccCCCceeEEEeEeccC
Q 004994 438 YTNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVS------QRQTDEEFLELASTISRLRHGNIVELIGYCNEH 510 (720)
Q Consensus 438 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~------~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~ 510 (720)
..++|...+.||+|+||.||+|.. .+++.||||++..... .......+.+|++++++++||||+++++++...
T Consensus 8 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 87 (322)
T 2ycf_A 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE 87 (322)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS
T ss_pred hhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC
Confidence 456788899999999999999965 5689999999875321 112234588999999999999999999999766
Q ss_pred CeEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCC---eEEc
Q 004994 511 GQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLI---VRVS 587 (720)
Q Consensus 511 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~---~kl~ 587 (720)
+ .++||||+++++|.+++.. ...+++.....++.++++||.|||+. +|+||||||+|||++.++. +||+
T Consensus 88 ~-~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~ 159 (322)
T 2ycf_A 88 D-YYIVLELMEGGELFDKVVG----NKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKIT 159 (322)
T ss_dssp S-EEEEEECCTTEETHHHHST----TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSSSCCEEEC
T ss_pred c-eEEEEecCCCCcHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCCCCeEEEc
Confidence 5 8999999999999998853 35688999999999999999999987 9999999999999987654 9999
Q ss_pred cccCCCCCCCCCCcccccCccccccCCCCccC----CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhccc
Q 004994 588 DCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE----SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIP 663 (720)
Q Consensus 588 DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~----~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~ 663 (720)
|||+++..... .......++..|+|||.+ ...++.++|||||||++|||++|+.||........ +...
T Consensus 160 Dfg~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~--~~~~--- 231 (322)
T 2ycf_A 160 DFGHSKILGET---SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS--LKDQ--- 231 (322)
T ss_dssp CCTTCEECCCC---HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSC--HHHH---
T ss_pred cCccceecccc---cccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHH--HHHH---
Confidence 99999876322 112234578999999985 45689999999999999999999999975432211 0000
Q ss_pred ccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 664 RLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 664 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
+... ............+.++.+++.+||+.||++|||++|++++
T Consensus 232 -------~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h 275 (322)
T 2ycf_A 232 -------ITSG-KYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 275 (322)
T ss_dssp -------HHHT-CCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred -------HHhC-ccccCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhhC
Confidence 0000 0000111112234678899999999999999999999864
No 197
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=1.6e-38 Score=333.06 Aligned_cols=254 Identities=21% Similarity=0.304 Sum_probs=197.2
Q ss_pred HhcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccc--cccHHHHHHHHHHHHccCCCceeEEEeEe--ccCCe
Q 004994 438 YTNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQ--RQTDEEFLELASTISRLRHGNIVELIGYC--NEHGQ 512 (720)
Q Consensus 438 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~~~~--~~~~~ 512 (720)
..++|...+.||+|+||.||+|.. .+++.||+|++...... ....+.+.+|++++++++||||+++++++ .+.+.
T Consensus 3 l~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (305)
T 2wtk_C 3 LIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQK 82 (305)
T ss_dssp --CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---C
T ss_pred cccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCe
Confidence 357899999999999999999976 56899999999754221 23457899999999999999999999998 44568
Q ss_pred EEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCC
Q 004994 513 HLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLA 592 (720)
Q Consensus 513 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla 592 (720)
.++||||++++ |.+++... ....+++..+..++.++++||.|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 83 ~~lv~e~~~~~-l~~~~~~~--~~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~dfg~~ 156 (305)
T 2wtk_C 83 MYMVMEYCVCG-MQEMLDSV--PEKRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVA 156 (305)
T ss_dssp EEEEEECCSEE-HHHHHHHS--TTCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred EEEEehhccCC-HHHHHHhC--cccccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeeccccc
Confidence 89999999986 77766532 235688999999999999999999997 9999999999999999999999999999
Q ss_pred CCCCCCCCcccccCccccccCCCCccCCC-C--CCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchh
Q 004994 593 PLLFSGSTNELSEGLLTAHGSGAPEFESG-S--YSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDID 669 (720)
Q Consensus 593 ~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-~--~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 669 (720)
................++..|+|||...+ . ++.++||||||+++|||++|+.||...........+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i----------- 225 (305)
T 2wtk_C 157 EALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENI----------- 225 (305)
T ss_dssp EECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH-----------
T ss_pred cccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHH-----------
Confidence 87654333333334568899999998844 2 477999999999999999999999753221110000
Q ss_pred hhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 670 ALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 670 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
... ..... ...+..+.+++.+||+.||++|||++|++++
T Consensus 226 --~~~-~~~~~----~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 226 --GKG-SYAIP----GDCGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp --HHC-CCCCC----SSSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred --hcC-CCCCC----CccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 000 00111 1223568899999999999999999999975
No 198
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=8.2e-40 Score=346.20 Aligned_cols=266 Identities=20% Similarity=0.286 Sum_probs=192.9
Q ss_pred cCCCCCCeeccCCCceEEEEEeC-CCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEe
Q 004994 440 NSFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYD 518 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 518 (720)
++|...+.||+|+||+||+|... +++.||||++..... ......+.+|++++++++||||+++++++.+.+..++|||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHE-EGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFE 80 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC-------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccc-cccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEec
Confidence 46778899999999999999764 789999999964322 1111245578999999999999999999999999999999
Q ss_pred eCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCC
Q 004994 519 YGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSG 598 (720)
Q Consensus 519 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~ 598 (720)
|++ |+|.+++... ...+++..+..++.+++.||.|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 81 ~~~-~~l~~~~~~~---~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~ 153 (324)
T 3mtl_A 81 YLD-KDLKQYLDDC---GNIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKSIP 153 (324)
T ss_dssp CCS-EEHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEEECC---
T ss_pred ccc-cCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCcccccccCC
Confidence 998 4888888532 34688999999999999999999987 9999999999999999999999999999765322
Q ss_pred CCcccccCccccccCCCCccCC--CCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcc--------cccCch
Q 004994 599 STNELSEGLLTAHGSGAPEFES--GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAI--------PRLHDI 668 (720)
Q Consensus 599 ~~~~~~~~~~~~~~~~aPE~~~--~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~--------~~~~~~ 668 (720)
. .......++.+|+|||.+. ..++.++|||||||++|||+||+.||...........+.... +.....
T Consensus 154 ~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 231 (324)
T 3mtl_A 154 T--KTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSN 231 (324)
T ss_dssp -----------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGC
T ss_pred c--cccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcc
Confidence 1 1223346788999999873 468999999999999999999999997644322111111000 000000
Q ss_pred hhhhhhcCCCCCc----hhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 669 DALSRMVDPSLDG----AYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 669 ~~~~~~~~~~~~~----~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
........+.... ........++.+|+.+||+.||++|||++|++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 282 (324)
T 3mtl_A 232 EEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKH 282 (324)
T ss_dssp HHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred hhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 0011111111000 0111234578899999999999999999999874
No 199
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=4.3e-39 Score=334.97 Aligned_cols=257 Identities=22% Similarity=0.324 Sum_probs=193.1
Q ss_pred cCCCCCCeeccCCCceEEEEEeC--CCc--EEEEEEeccccc-ccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAELP--GGK--LLAVKKLSNTVS-QRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHL 514 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~~--~g~--~vavK~l~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~ 514 (720)
++|...+.||+|+||+||+|.+. +++ .||||++..... .....+.+.+|++++++++||||+++++++.+.. .+
T Consensus 18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~ 96 (291)
T 1u46_A 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MK 96 (291)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CE
T ss_pred hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ce
Confidence 56888899999999999999753 333 689999875432 2345578999999999999999999999998765 88
Q ss_pred EEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCC
Q 004994 515 LVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPL 594 (720)
Q Consensus 515 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~ 594 (720)
+||||+++++|.+++... ...+++..+..++.++++||.|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 97 ~v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~ 170 (291)
T 1u46_A 97 MVTELAPLGSLLDRLRKH---QGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRA 170 (291)
T ss_dssp EEEECCTTCBHHHHHHHH---GGGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEE
T ss_pred eeEecccCCCHHHHHHhc---cCCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEEcccccccc
Confidence 999999999999998632 35688999999999999999999997 999999999999999999999999999987
Q ss_pred CCCCCCcc-cccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcccccCchhhh
Q 004994 595 LFSGSTNE-LSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDAL 671 (720)
Q Consensus 595 ~~~~~~~~-~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (720)
........ ......++..|+|||.. ...++.++||||||+++|||++ |+.||........ ..
T Consensus 171 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~---~~------------ 235 (291)
T 1u46_A 171 LPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQI---LH------------ 235 (291)
T ss_dssp CCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH---HH------------
T ss_pred ccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHH---HH------------
Confidence 64432211 22234567789999998 5568999999999999999999 9999975432111 11
Q ss_pred hhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 672 SRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 672 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
.+.............+.++.+++.+||+.||++|||+.++++.|+++
T Consensus 236 -~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~ 282 (291)
T 1u46_A 236 -KIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEA 282 (291)
T ss_dssp -HHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred -HHHccCCCCCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHh
Confidence 00000000001112346788999999999999999999999999875
No 200
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=1.8e-38 Score=351.94 Aligned_cols=260 Identities=20% Similarity=0.216 Sum_probs=202.9
Q ss_pred hcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCC-CceeEEEeEeccCCeEEEE
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRH-GNIVELIGYCNEHGQHLLV 516 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H-~niv~l~~~~~~~~~~~lv 516 (720)
.++|...+.||+|+||+||+|.. .+++.||||++..... ..++..|+++++.++| ++|..+..++.+.+..++|
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~----~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lv 81 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK----HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLV 81 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS----SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc----cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEE
Confidence 46899999999999999999965 6799999998764322 2357889999999977 5666677777788899999
Q ss_pred EeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEE---cCCCCeEEccccCCC
Q 004994 517 YDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILL---DEKLIVRVSDCGLAP 593 (720)
Q Consensus 517 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl---~~~~~~kl~DFGla~ 593 (720)
|||+ +++|.+++... ...+++..+..|+.|++.||.|||+. +||||||||+|||+ +.++.+||+|||+++
T Consensus 82 me~~-g~sL~~ll~~~---~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~ 154 (483)
T 3sv0_A 82 MDLL-GPSLEDLFNFC---SRKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 154 (483)
T ss_dssp EECC-CCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCCTTCE
T ss_pred EECC-CCCHHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeCCcce
Confidence 9999 88999999632 35689999999999999999999997 99999999999999 688999999999998
Q ss_pred CCCCCCCcc-----cccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCc
Q 004994 594 LLFSGSTNE-----LSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHD 667 (720)
Q Consensus 594 ~~~~~~~~~-----~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~ 667 (720)
.+....... ......++..|+|||.+ ...++.++|||||||++|||++|+.||................ .
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~----~ 230 (483)
T 3sv0_A 155 KYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKIS----E 230 (483)
T ss_dssp ECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHH----H
T ss_pred eccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHh----h
Confidence 775433221 12256789999999998 5578999999999999999999999997644322211111000 0
Q ss_pred hhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 668 IDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 668 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
..+.. .........+.++.+++.+||+.||++||++++|++.|+++
T Consensus 231 -----~~~~~-~~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l 276 (483)
T 3sv0_A 231 -----KKVAT-SIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDL 276 (483)
T ss_dssp -----HHHHS-CHHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHH
T ss_pred -----ccccc-cHHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence 00000 00011122346789999999999999999999999999876
No 201
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=9.7e-39 Score=334.77 Aligned_cols=251 Identities=21% Similarity=0.298 Sum_probs=198.5
Q ss_pred HhcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEE
Q 004994 438 YTNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLV 516 (720)
Q Consensus 438 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 516 (720)
..++|...+.||+|+||+||+|.. .+|+.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (304)
T 2jam_A 7 IRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSP--AFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLV 84 (304)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC--------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEeccc--ccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEE
Confidence 346788889999999999999966 479999999997532 22345788999999999999999999999999999999
Q ss_pred EeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEE---cCCCCeEEccccCCC
Q 004994 517 YDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILL---DEKLIVRVSDCGLAP 593 (720)
Q Consensus 517 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl---~~~~~~kl~DFGla~ 593 (720)
|||+++++|.+++.. ...+++.....++.+++.||.|||+. +|+||||||+||++ +.++.+||+|||+++
T Consensus 85 ~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~ 157 (304)
T 2jam_A 85 MQLVSGGELFDRILE----RGVYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSK 157 (304)
T ss_dssp ECCCCSCBHHHHHHH----HSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSCSTTC
T ss_pred EEcCCCccHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccCCcce
Confidence 999999999998853 34688999999999999999999997 99999999999999 788999999999997
Q ss_pred CCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhh
Q 004994 594 LLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALS 672 (720)
Q Consensus 594 ~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (720)
..... ......++..|+|||.. ...++.++|||||||++|||++|+.||...........+..
T Consensus 158 ~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~------------ 221 (304)
T 2jam_A 158 MEQNG----IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKE------------ 221 (304)
T ss_dssp CCCCB----TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH------------
T ss_pred ecCCC----ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHc------------
Confidence 65321 12234578899999998 55689999999999999999999999965432111000000
Q ss_pred hhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 673 RMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 673 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
... ..........+.++.+++.+||+.||++|||++|++++
T Consensus 222 ~~~--~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (304)
T 2jam_A 222 GYY--EFESPFWDDISESAKDFICHLLEKDPNERYTCEKALSH 262 (304)
T ss_dssp CCC--CCCTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred CCC--CCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 000 00011112234678899999999999999999999874
No 202
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=5.6e-39 Score=335.62 Aligned_cols=268 Identities=19% Similarity=0.277 Sum_probs=197.3
Q ss_pred cCCCCCCeeccCCCceEEEEEeC-CCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEe
Q 004994 440 NSFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYD 518 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 518 (720)
++|+..+.||+|+||.||+|... +|+.||||++..........+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 82 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence 46778899999999999999664 78999999997554334445678899999999999999999999999999999999
Q ss_pred eCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCC
Q 004994 519 YGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSG 598 (720)
Q Consensus 519 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~ 598 (720)
|+. ++|.+++.... ...+++..+..++.++++||.|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 83 ~~~-~~L~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~ 156 (299)
T 2r3i_A 83 FLH-QDLKKFMDASA--LTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 156 (299)
T ss_dssp CCS-EEHHHHHHHTT--TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCC
T ss_pred ccc-CCHHHHHHhhh--ccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEECcchhhhhccCC
Confidence 998 59999886432 24578899999999999999999997 9999999999999999999999999998765322
Q ss_pred CCcccccCccccccCCCCccCCC--CCCCccchHhHHHHHHHHHhCCCCCCCCCCccccc-hhhhcc-cc---cCchhh-
Q 004994 599 STNELSEGLLTAHGSGAPEFESG--SYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQS-LVRWAI-PR---LHDIDA- 670 (720)
Q Consensus 599 ~~~~~~~~~~~~~~~~aPE~~~~--~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~-~~~~~~-~~---~~~~~~- 670 (720)
. .......++..|+|||...+ .++.++|||||||++|||+||+.||.......... +.+... +. ......
T Consensus 157 ~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (299)
T 2r3i_A 157 V--RTYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 234 (299)
T ss_dssp S--BCTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGS
T ss_pred c--cccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCchhhhhHhhcC
Confidence 1 12223457889999998843 37999999999999999999999997643221110 000000 00 000000
Q ss_pred --hhhhcCCCCCch---hhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 671 --LSRMVDPSLDGA---YLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 671 --~~~~~~~~~~~~---~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
....+....... .....+.++.+++.+||+.||++|||++|++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~h 284 (299)
T 2r3i_A 235 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH 284 (299)
T ss_dssp TTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 000000000000 011234678899999999999999999999874
No 203
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=8.8e-39 Score=369.36 Aligned_cols=250 Identities=20% Similarity=0.247 Sum_probs=202.4
Q ss_pred hcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccc-cccccHHHHHHHHHHHHcc-CCCceeEEEeEeccCCeEEE
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTV-SQRQTDEEFLELASTISRL-RHGNIVELIGYCNEHGQHLL 515 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~-~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~l 515 (720)
.++|...++||+|+||+||+|.. .+++.||||++++.. ......+.+..|.+++..+ +||||+.+++++.+.+..|+
T Consensus 340 ~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~l 419 (674)
T 3pfq_A 340 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF 419 (674)
T ss_dssp CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEE
T ss_pred ccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEE
Confidence 46788899999999999999965 568999999997542 2233456788899999887 79999999999999999999
Q ss_pred EEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCC
Q 004994 516 VYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLL 595 (720)
Q Consensus 516 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~ 595 (720)
||||+++|+|.+++.. ...+++..+..++.+++.||+|||+. +||||||||+|||++.++++||+|||+|+..
T Consensus 420 V~E~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~DFGla~~~ 492 (674)
T 3pfq_A 420 VMEYVNGGDLMYHIQQ----VGRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEN 492 (674)
T ss_dssp EEECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEECCCTTCEEC
T ss_pred EEeCcCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEeecceeecc
Confidence 9999999999999853 34689999999999999999999997 9999999999999999999999999999864
Q ss_pred CCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhh
Q 004994 596 FSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRM 674 (720)
Q Consensus 596 ~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (720)
.... .......||+.|+|||++ ...|+.++|||||||++|||++|+.||...+.... ...+
T Consensus 493 ~~~~--~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~----------------~~~i 554 (674)
T 3pfq_A 493 IWDG--VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDEL----------------FQSI 554 (674)
T ss_dssp CCTT--CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH----------------HHHH
T ss_pred ccCC--cccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHH----------------HHHH
Confidence 3222 223456789999999998 56799999999999999999999999975432211 1111
Q ss_pred cCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCH-----HHHHHH
Q 004994 675 VDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPM-----SEIVQD 715 (720)
Q Consensus 675 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~-----~evl~~ 715 (720)
..... .++...+.++.+|+.+||+.||++||++ +||++|
T Consensus 555 ~~~~~--~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h 598 (674)
T 3pfq_A 555 MEHNV--AYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 598 (674)
T ss_dssp HSSCC--CCCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSS
T ss_pred HhCCC--CCCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcC
Confidence 11111 1122234678899999999999999998 777653
No 204
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=9.3e-39 Score=338.92 Aligned_cols=258 Identities=16% Similarity=0.244 Sum_probs=196.5
Q ss_pred cCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccC-CCceeEEEeEecc--CCeEEE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLR-HGNIVELIGYCNE--HGQHLL 515 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~~~~~~--~~~~~l 515 (720)
++|+..+.||+|+||+||+|.. .+++.||||++.. ...+.+.+|++++++++ ||||+++++++.+ ....++
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~-----~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~l 110 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKP-----VKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPAL 110 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECS-----CCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEecc-----cchHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEE
Confidence 5788889999999999999964 6799999999863 23467899999999997 9999999999987 667899
Q ss_pred EEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCC-CeEEccccCCCC
Q 004994 516 VYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKL-IVRVSDCGLAPL 594 (720)
Q Consensus 516 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~-~~kl~DFGla~~ 594 (720)
||||+++++|.+++. .+++..+..++.++++||+|||+. +|+||||||+|||++.++ .+||+|||+++.
T Consensus 111 v~e~~~~~~l~~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~ 180 (330)
T 3nsz_A 111 VFEHVNNTDFKQLYQ-------TLTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 180 (330)
T ss_dssp EEECCCCCCHHHHGG-------GCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred EEeccCchhHHHHHH-------hCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCCceE
Confidence 999999999998873 378888999999999999999987 999999999999999776 899999999987
Q ss_pred CCCCCCcccccCccccccCCCCccCC--CCCCCccchHhHHHHHHHHHhCCCCCCCCCCcccc--chhhhcc--------
Q 004994 595 LFSGSTNELSEGLLTAHGSGAPEFES--GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQ--SLVRWAI-------- 662 (720)
Q Consensus 595 ~~~~~~~~~~~~~~~~~~~~aPE~~~--~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~--~~~~~~~-------- 662 (720)
...... .....++..|+|||... ..++.++|||||||++|||++|+.||......... .+.....
T Consensus 181 ~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~ 257 (330)
T 3nsz_A 181 YHPGQE---YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYI 257 (330)
T ss_dssp CCTTCC---CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHH
T ss_pred cCCCCc---cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHH
Confidence 643322 23356788999999873 46899999999999999999999999543321110 0000000
Q ss_pred --cccCchhhhhhhcCCC--------CCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 663 --PRLHDIDALSRMVDPS--------LDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 663 --~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
................ .........+.++.+|+.+||+.||++|||++|+++|
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h 320 (330)
T 3nsz_A 258 DKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 320 (330)
T ss_dssp HHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred HHhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 0000000000000000 0011112235678999999999999999999999975
No 205
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=1.6e-39 Score=350.79 Aligned_cols=255 Identities=15% Similarity=0.080 Sum_probs=178.7
Q ss_pred cCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEeccccc-ccccHHHHHHHHHHHHcc--CCCceeEEE-------eEec
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVS-QRQTDEEFLELASTISRL--RHGNIVELI-------GYCN 508 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~~~e~~~l~~l--~H~niv~l~-------~~~~ 508 (720)
..|...+.||+|+||+||+|.. .+|+.||||++..... .....+.+.+|+++++.+ +||||++++ +++.
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~ 141 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVA 141 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEE
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhee
Confidence 3477789999999999999975 5799999999986533 234456677775444444 699988865 3332
Q ss_pred cC-----------------CeEEEEEeeCCCCCHHHHhhccchhccccCHHHH------HHHHHHHHHHHHHHHhcCCCC
Q 004994 509 EH-----------------GQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIR------IRVALGAARALQYLQEVCEPP 565 (720)
Q Consensus 509 ~~-----------------~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~------~~i~~~ia~~L~~LH~~~~~~ 565 (720)
.. ...++||||++ |+|.+++... ...+.+..+ ..++.|+++||+|||+. +
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~---~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~---~ 214 (371)
T 3q60_A 142 VQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTL---DFVYVFRGDEGILALHILTAQLIRLAANLQSK---G 214 (371)
T ss_dssp ETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHH---HHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHT---T
T ss_pred cCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHh---ccccchhhhhhhhhHHHHHHHHHHHHHHHHHC---C
Confidence 22 34799999999 8999999643 223455556 78889999999999987 9
Q ss_pred eeecCCCCCCeEEcCCCCeEEccccCCCCCCCCCCcccccCccccccCCCCccCC---CCCCCccchHhHHHHHHHHHhC
Q 004994 566 IVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFES---GSYSCQSDVYSLGVVMLELLTG 642 (720)
Q Consensus 566 ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~---~~~~~~~Dv~S~Gvvl~elltG 642 (720)
||||||||+|||++.++.+||+|||+|+..... .....++..|+|||.+. ..++.++|||||||++|||+||
T Consensus 215 ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg 289 (371)
T 3q60_A 215 LVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTR-----GPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCL 289 (371)
T ss_dssp EEETTCSGGGEEECTTSCEEECCGGGEEETTCE-----EEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHS
T ss_pred CccCcCCHHHEEECCCCCEEEEecceeeecCCC-----ccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhC
Confidence 999999999999999999999999999865321 11244568999999984 3689999999999999999999
Q ss_pred CCCCCCCCCccccchhhhcccccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 643 RKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 643 ~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
+.||....+......... .... ..............+..+.+++.+||+.||++|||+.|++++
T Consensus 290 ~~Pf~~~~~~~~~~~~~~---~~~~------~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 353 (371)
T 3q60_A 290 FLPFGLVTPGIKGSWKRP---SLRV------PGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMET 353 (371)
T ss_dssp SCSTTBCCTTCTTCCCBC---CTTS------CCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTS
T ss_pred CCCCCCcCcccccchhhh---hhhh------ccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 999976543221111000 0000 000000000111234678899999999999999999999753
No 206
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.8e-39 Score=348.00 Aligned_cols=255 Identities=25% Similarity=0.308 Sum_probs=199.9
Q ss_pred cCCCCCCeeccCCCceEEEEEe----CCCcEEEEEEeccccc--ccccHHHHHHHHHHHHcc-CCCceeEEEeEeccCCe
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL----PGGKLLAVKKLSNTVS--QRQTDEEFLELASTISRL-RHGNIVELIGYCNEHGQ 512 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~----~~g~~vavK~l~~~~~--~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~ 512 (720)
++|...+.||+|+||+||+|+. .+|+.||||++++... .....+.+.+|+++++++ +||||+++++++...+.
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 133 (355)
T 1vzo_A 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK 133 (355)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCce
Confidence 5688889999999999999976 4789999999975321 123345677899999999 69999999999999999
Q ss_pred EEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCC
Q 004994 513 HLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLA 592 (720)
Q Consensus 513 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla 592 (720)
.++||||+++|+|.+++.. ...+++..+..++.|+++||.|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 134 ~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DfG~a 206 (355)
T 1vzo_A 134 LHLILDYINGGELFTHLSQ----RERFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLS 206 (355)
T ss_dssp EEEEECCCCSCBHHHHHHH----HSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSSEE
T ss_pred EEEEeecCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcEEEeeCCCC
Confidence 9999999999999999853 34688999999999999999999987 8999999999999999999999999999
Q ss_pred CCCCCCCCcccccCccccccCCCCccCCC---CCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchh
Q 004994 593 PLLFSGSTNELSEGLLTAHGSGAPEFESG---SYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDID 669 (720)
Q Consensus 593 ~~~~~~~~~~~~~~~~~~~~~~aPE~~~~---~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 669 (720)
+.+..... .......++..|+|||.+.+ .++.++|||||||++|||+||+.||...........+..
T Consensus 207 ~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~--------- 276 (355)
T 1vzo_A 207 KEFVADET-ERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISR--------- 276 (355)
T ss_dssp EECCGGGG-GGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHH---------
T ss_pred eecccCCC-CcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHH---------
Confidence 86533221 12234568999999999853 478999999999999999999999975432221110000
Q ss_pred hhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCC-----CHHHHHHHH
Q 004994 670 ALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRP-----PMSEIVQDL 716 (720)
Q Consensus 670 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~evl~~L 716 (720)
.... ..+. ++...+..+.+++.+||+.||.+|| |++|++++.
T Consensus 277 ~~~~-~~~~----~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~ 323 (355)
T 1vzo_A 277 RILK-SEPP----YPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL 323 (355)
T ss_dssp HHHH-CCCC----CCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSG
T ss_pred HHhc-cCCC----CCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCc
Confidence 0000 0111 1122335678999999999999999 999998764
No 207
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=8e-39 Score=335.22 Aligned_cols=250 Identities=22% Similarity=0.361 Sum_probs=202.5
Q ss_pred hcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEE
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVY 517 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 517 (720)
.+.|...+.||+|+||.||+|.. .+++.||||++..... ....+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 99 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA-EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIM 99 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTC-STTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEeccccc-HHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEE
Confidence 34677889999999999999965 5789999999975432 344678999999999999999999999999999999999
Q ss_pred eeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCC
Q 004994 518 DYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFS 597 (720)
Q Consensus 518 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~ 597 (720)
||+++++|.+++.. ..+++..+..++.++++||.|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 100 e~~~~~~L~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~ 171 (303)
T 3a7i_A 100 EYLGGGSALDLLEP-----GPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTD 171 (303)
T ss_dssp ECCTTEEHHHHHTT-----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECBT
T ss_pred EeCCCCcHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeecccceecCc
Confidence 99999999999853 4688999999999999999999997 999999999999999999999999999977643
Q ss_pred CCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcC
Q 004994 598 GSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVD 676 (720)
Q Consensus 598 ~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (720)
.. .......++..|+|||.. ...++.++||||||+++|||++|+.||........... +.....
T Consensus 172 ~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~-------------~~~~~~ 236 (303)
T 3a7i_A 172 TQ--IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFL-------------IPKNNP 236 (303)
T ss_dssp TB--CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHH-------------HHHSCC
T ss_pred cc--cccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHH-------------hhcCCC
Confidence 22 122345678899999998 55689999999999999999999999975332111100 000111
Q ss_pred CCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q 004994 677 PSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDL 716 (720)
Q Consensus 677 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L 716 (720)
+.... ..+..+.+++.+||+.||++|||++|++++.
T Consensus 237 ~~~~~----~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~ 272 (303)
T 3a7i_A 237 PTLEG----NYSKPLKEFVEACLNKEPSFRPTAKELLKHK 272 (303)
T ss_dssp CCCCS----SCCHHHHHHHHHHCCSSGGGSCCHHHHTTCH
T ss_pred CCCcc----ccCHHHHHHHHHHcCCChhhCcCHHHHhhCh
Confidence 11111 1235688999999999999999999998753
No 208
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=1.2e-39 Score=344.13 Aligned_cols=258 Identities=21% Similarity=0.281 Sum_probs=198.6
Q ss_pred HHhcCCCCCCeeccCCCceEEEEEeCCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEE
Q 004994 437 QYTNSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLV 516 (720)
Q Consensus 437 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 516 (720)
...++|...+.||+|+||.||+|...+ .||+|++..........+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 30 i~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv 107 (319)
T 2y4i_B 30 IPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAII 107 (319)
T ss_dssp SCCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEE
T ss_pred CCHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEE
Confidence 345788899999999999999998754 499999975543344445678899999999999999999999999999999
Q ss_pred EeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCC
Q 004994 517 YDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLF 596 (720)
Q Consensus 517 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~ 596 (720)
|||+++++|.+++... ...+++..+..++.++++||+|||+. +|+||||||+|||++ ++.+||+|||+++...
T Consensus 108 ~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~ 180 (319)
T 2y4i_B 108 TSLCKGRTLYSVVRDA---KIVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITDFGLFSISG 180 (319)
T ss_dssp CBCCCSEEHHHHTTSS---CCCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECCCSCCC---
T ss_pred eecccCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEeecCCccccc
Confidence 9999999999999642 34688999999999999999999997 999999999999998 6799999999987653
Q ss_pred CCCC---cccccCccccccCCCCccCCC----------CCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhccc
Q 004994 597 SGST---NELSEGLLTAHGSGAPEFESG----------SYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIP 663 (720)
Q Consensus 597 ~~~~---~~~~~~~~~~~~~~aPE~~~~----------~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~ 663 (720)
.... ........++..|+|||...+ .++.++|||||||++|||+||+.||...........+
T Consensus 181 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~----- 255 (319)
T 2y4i_B 181 VLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQM----- 255 (319)
T ss_dssp -------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHHH-----
T ss_pred cccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHh-----
Confidence 2111 112223457889999998742 4788999999999999999999999754321110000
Q ss_pred ccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 664 RLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 664 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
.....+.... ...+.++.+++.+||+.||++|||++|+++.|+++
T Consensus 256 --------~~~~~~~~~~---~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l 300 (319)
T 2y4i_B 256 --------GTGMKPNLSQ---IGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKL 300 (319)
T ss_dssp --------HTTCCCCCCC---SSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC
T ss_pred --------ccCCCCCCCc---CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence 0001111110 01224578999999999999999999999999876
No 209
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=1.8e-38 Score=348.65 Aligned_cols=198 Identities=22% Similarity=0.294 Sum_probs=168.4
Q ss_pred hcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHcc------CCCceeEEEeEeccCC
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRL------RHGNIVELIGYCNEHG 511 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l------~H~niv~l~~~~~~~~ 511 (720)
..+|...+.||+|+||+||+|.. .+++.||||++... ....+++.+|+++++.+ +|+||+++++++...+
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~ 172 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE---KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRN 172 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETT
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc---cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCC
Confidence 45688889999999999999955 56899999999753 23445677888888777 5679999999999999
Q ss_pred eEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCC--eEEccc
Q 004994 512 QHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLI--VRVSDC 589 (720)
Q Consensus 512 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~--~kl~DF 589 (720)
..++||||++ ++|.+++... ....+++..+..++.++++||+|||+. +||||||||+|||++.++. +||+||
T Consensus 173 ~~~lv~e~~~-~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~vkL~DF 246 (429)
T 3kvw_A 173 HICMTFELLS-MNLYELIKKN--KFQGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVIDF 246 (429)
T ss_dssp EEEEEECCCC-CBHHHHHHHT--TTCCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCEEECCC
T ss_pred eEEEEEeccC-CCHHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcceEEeec
Confidence 9999999997 5899888643 234589999999999999999999998 9999999999999999987 999999
Q ss_pred cCCCCCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCC
Q 004994 590 GLAPLLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSR 650 (720)
Q Consensus 590 Gla~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~ 650 (720)
|+|+..... .....+++.|+|||.+ ...++.++|||||||++|||+||+.||....
T Consensus 247 G~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~ 303 (429)
T 3kvw_A 247 GSSCYEHQR-----VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGED 303 (429)
T ss_dssp TTCEETTCC-----CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred ccceecCCc-----ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCC
Confidence 999765322 2235678999999998 5579999999999999999999999997654
No 210
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.1e-39 Score=342.12 Aligned_cols=268 Identities=21% Similarity=0.291 Sum_probs=202.7
Q ss_pred cCCCCCCeeccCCCceEEEEEe-----CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCC--e
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL-----PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHG--Q 512 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~-----~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~--~ 512 (720)
++|...+.||+|+||.||+|.. .+|+.||||++... .....+.+.+|++++++++||||+++++++...+ .
T Consensus 41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 118 (326)
T 2w1i_A 41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN 118 (326)
T ss_dssp GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSC--CSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----C
T ss_pred HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCc
Confidence 4577789999999999999973 46899999999753 2344578999999999999999999999987644 7
Q ss_pred EEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCC
Q 004994 513 HLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLA 592 (720)
Q Consensus 513 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla 592 (720)
.++||||+++++|.+++... ...+++..+..++.++++||+|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 119 ~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~Dfg~~ 192 (326)
T 2w1i_A 119 LKLIMEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLT 192 (326)
T ss_dssp CEEEECCCTTCBHHHHHHHS---TTSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTC
T ss_pred eEEEEECCCCCCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEecCcch
Confidence 89999999999999999642 34589999999999999999999997 9999999999999999999999999999
Q ss_pred CCCCCCCCc-ccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCc---
Q 004994 593 PLLFSGSTN-ELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHD--- 667 (720)
Q Consensus 593 ~~~~~~~~~-~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~--- 667 (720)
+........ .......++..|+|||.. ...++.++||||||+++|||+||+.||..... ...+........
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~----~~~~~~~~~~~~~~~ 268 (326)
T 2w1i_A 193 KVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPA----EFMRMIGNDKQGQMI 268 (326)
T ss_dssp EECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHH----HHHHHHCTTCCTHHH
T ss_pred hhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHH----HHHHhhccccchhhh
Confidence 876443221 112234456779999988 55689999999999999999999999853210 000000000000
Q ss_pred hhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 668 IDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 668 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
...+.+.+........+..++.++.+++.+||+.||++|||+.|+++.|+++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l 320 (326)
T 2w1i_A 269 VFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 320 (326)
T ss_dssp HHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHHHHhhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 0001111111100111223446789999999999999999999999999876
No 211
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=1.2e-38 Score=331.12 Aligned_cols=255 Identities=21% Similarity=0.322 Sum_probs=205.0
Q ss_pred HHhcCCCCCCeeccCCCceEEEEEeC-CCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEE
Q 004994 437 QYTNSFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLL 515 (720)
Q Consensus 437 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~l 515 (720)
.+.++|...+.||+|+||.||+|... +++.||||++..........+.+.+|++++++++||||+++++++.+.+..++
T Consensus 19 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 98 (287)
T 2wei_A 19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYI 98 (287)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred HHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEE
Confidence 34578899999999999999999764 78999999997655445567789999999999999999999999999999999
Q ss_pred EEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCC---CCeEEccccCC
Q 004994 516 VYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEK---LIVRVSDCGLA 592 (720)
Q Consensus 516 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~---~~~kl~DFGla 592 (720)
||||+++++|.+++.. ...+++..+..++.++++||.|||+. +|+||||||+||+++.+ +.+||+|||++
T Consensus 99 v~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~ 171 (287)
T 2wei_A 99 VGELYTGGELFDEIIK----RKRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLS 171 (287)
T ss_dssp EECCCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECSTTGG
T ss_pred EEEccCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEEEeccCcc
Confidence 9999999999988853 34688999999999999999999997 99999999999999754 47999999999
Q ss_pred CCCCCCCCcccccCccccccCCCCccCCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhh
Q 004994 593 PLLFSGSTNELSEGLLTAHGSGAPEFESGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALS 672 (720)
Q Consensus 593 ~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (720)
....... ......++..|+|||...+.++.++||||||+++|||++|+.||...........+..
T Consensus 172 ~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~------------ 236 (287)
T 2wei_A 172 TCFQQNT---KMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVET------------ 236 (287)
T ss_dssp GTBCCCS---SCSCHHHHHTTCCHHHHTTCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH------------
T ss_pred eeecCCC---ccccccCcccccChHHhcCCCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHc------------
Confidence 8664322 1223457889999999988899999999999999999999999975432111100000
Q ss_pred hhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 673 RMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 673 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.... .........+.++.+++.+||+.||++|||++|++++
T Consensus 237 ~~~~--~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 277 (287)
T 2wei_A 237 GKYA--FDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (287)
T ss_dssp CCCC--CCSGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred CCCC--CCchhhhhcCHHHHHHHHHHcccChhhCcCHHHHhcC
Confidence 0000 0000111234678899999999999999999999974
No 212
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=2.9e-39 Score=347.52 Aligned_cols=262 Identities=19% Similarity=0.282 Sum_probs=184.3
Q ss_pred hcCCCCCCeeccCCCceEEEEE-eCCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccC------C
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAE-LPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEH------G 511 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~------~ 511 (720)
.++|...+.||+|+||.||+|. ..+|+.||||++..........+.+.+|+++++.++||||+++++++... .
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 107 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence 4678889999999999999996 46799999999976544445567889999999999999999999998653 5
Q ss_pred eEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccC
Q 004994 512 QHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGL 591 (720)
Q Consensus 512 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGl 591 (720)
..++|+||+ +++|.+++.. ..+++..+..++.|+++||.|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 108 ~~~lv~e~~-~~~L~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DFG~ 178 (367)
T 2fst_X 108 DVYLVTHLM-GADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGL 178 (367)
T ss_dssp CCEEEEECC-CEECC----------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC---
T ss_pred eEEEEeccc-CCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeeccc
Confidence 689999998 5789888753 4688999999999999999999997 999999999999999999999999999
Q ss_pred CCCCCCCCCcccccCccccccCCCCccCC--CCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcc-------
Q 004994 592 APLLFSGSTNELSEGLLTAHGSGAPEFES--GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAI------- 662 (720)
Q Consensus 592 a~~~~~~~~~~~~~~~~~~~~~~aPE~~~--~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~------- 662 (720)
++..... .....++.+|+|||.+. ..++.++|||||||++|||++|+.||...........+....
T Consensus 179 a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~ 253 (367)
T 2fst_X 179 ARHTADE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 253 (367)
T ss_dssp -----------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHH
T ss_pred ccccccc-----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHH
Confidence 9865322 22356789999999874 468999999999999999999999997644322111110000
Q ss_pred -cccCchhhhhhh---cCCCCCc---hhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 663 -PRLHDIDALSRM---VDPSLDG---AYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 663 -~~~~~~~~~~~~---~~~~~~~---~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
..+... ....+ +...... .......+.+.+|+.+||+.||++|||++|++++
T Consensus 254 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 254 LKKISSE-SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp HTTCCCH-HHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHhhhH-HHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 000000 00000 0000000 0011224578899999999999999999999875
No 213
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=1.1e-38 Score=332.73 Aligned_cols=252 Identities=21% Similarity=0.303 Sum_probs=195.2
Q ss_pred CCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEEee
Q 004994 441 SFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDY 519 (720)
Q Consensus 441 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 519 (720)
+|....+||+|+||.||+|.. .+++.||||.+.... ....+.+.+|+++++.++||||+++++++.+.+..++||||
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 100 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERD--SRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQ 100 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCC--C---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCc--hHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEe
Confidence 455556999999999999965 578999999987542 34457899999999999999999999999999999999999
Q ss_pred CCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcC-CCCeEEccccCCCCCCCC
Q 004994 520 GGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDE-KLIVRVSDCGLAPLLFSG 598 (720)
Q Consensus 520 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~-~~~~kl~DFGla~~~~~~ 598 (720)
+++++|.+++.... ....+++..+..++.++++||.|||+. +|+||||||+||+++. ++.+||+|||+++.....
T Consensus 101 ~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~ 176 (295)
T 2clq_A 101 VPGGSLSALLRSKW-GPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGI 176 (295)
T ss_dssp CSEEEHHHHHHHTT-CCCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCEESCC-
T ss_pred CCCCCHHHHHHhhc-cCCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeecccccccCCC
Confidence 99999999986431 223567888899999999999999997 9999999999999987 899999999999876432
Q ss_pred CCcccccCccccccCCCCccCCC---CCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhc
Q 004994 599 STNELSEGLLTAHGSGAPEFESG---SYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMV 675 (720)
Q Consensus 599 ~~~~~~~~~~~~~~~~aPE~~~~---~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (720)
. .......++..|+|||...+ .++.++||||||+++|||+||+.||......... ... ......
T Consensus 177 ~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~-~~~----------~~~~~~ 243 (295)
T 2clq_A 177 N--PCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAA-MFK----------VGMFKV 243 (295)
T ss_dssp ------CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHH-HHH----------HHHHCC
T ss_pred C--CcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHH-HHh----------hccccc
Confidence 1 12234567889999998832 3889999999999999999999999642211100 000 000001
Q ss_pred CCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 676 DPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 676 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.+.+. ...+.++.+++.+||+.||++|||++|++++
T Consensus 244 ~~~~~----~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~ 279 (295)
T 2clq_A 244 HPEIP----ESMSAEAKAFILKCFEPDPDKRACANDLLVD 279 (295)
T ss_dssp CCCCC----TTSCHHHHHHHHHTTCSSTTTSCCHHHHHTS
T ss_pred ccccc----ccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 11111 1234578899999999999999999999864
No 214
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=3.5e-39 Score=337.67 Aligned_cols=264 Identities=23% Similarity=0.355 Sum_probs=184.6
Q ss_pred hcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEE
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVY 517 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 517 (720)
.++|...+.||+|+||.||+|.. .+++.||||++..... ....+++.+|++++++++||||+++++++...+..++||
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (303)
T 2vwi_A 14 RDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKC-QTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVM 92 (303)
T ss_dssp CCCCEEEEECC---CCCEEEEEC----CEEEEECCC-----------------CCCCCCCTTBCCEEEEEESSSCEEEEE
T ss_pred hhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhc-chhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEe
Confidence 46788899999999999999965 4789999999864422 234567889999999999999999999999999999999
Q ss_pred eeCCCCCHHHHhhccc----hhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCC
Q 004994 518 DYGGNCTLHDLLHSDE----EAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAP 593 (720)
Q Consensus 518 e~~~~gsL~~~l~~~~----~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~ 593 (720)
||+++++|.+++.... .....+++..+..++.++++||.|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 93 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~ 169 (303)
T 2vwi_A 93 KLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVSA 169 (303)
T ss_dssp ECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCHHHH
T ss_pred hhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEEeccchh
Confidence 9999999999986321 1234589999999999999999999997 99999999999999999999999999987
Q ss_pred CCCCCCC---cccccCccccccCCCCccCC--CCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchh-hhcccccCc
Q 004994 594 LLFSGST---NELSEGLLTAHGSGAPEFES--GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLV-RWAIPRLHD 667 (720)
Q Consensus 594 ~~~~~~~---~~~~~~~~~~~~~~aPE~~~--~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~-~~~~~~~~~ 667 (720)
....... ........++..|+|||... ..++.++|||||||++|||+||+.||............ ....+....
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 249 (303)
T 2vwi_A 170 FLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLET 249 (303)
T ss_dssp HCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCCCTTC
T ss_pred eeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCCcccc
Confidence 6543221 11223356788999999883 46899999999999999999999999764332111000 000000000
Q ss_pred hhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 668 IDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 668 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
...++... ...+.++.+++.+||+.||++|||++|++++
T Consensus 250 -----~~~~~~~~----~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 288 (303)
T 2vwi_A 250 -----GVQDKEML----KKYGKSFRKMISLCLQKDPEKRPTAAELLRH 288 (303)
T ss_dssp ----------CCC----CCCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred -----ccccchhh----hhhhHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 00011111 1223568899999999999999999999874
No 215
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.5e-39 Score=341.55 Aligned_cols=257 Identities=24% Similarity=0.377 Sum_probs=196.8
Q ss_pred HHHHHHhcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHcc-CCCceeEEEeEecc-
Q 004994 433 ASLQQYTNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRL-RHGNIVELIGYCNE- 509 (720)
Q Consensus 433 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~- 509 (720)
.++....++|...+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|+++++++ +||||+++++++..
T Consensus 17 ~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 93 (326)
T 2x7f_A 17 SALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG---DEEEEIKQEINMLKKYSHHRNIATYYGAFIKK 93 (326)
T ss_dssp CCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS---STTHHHHHHHHHHHHHCCSTTBCCEEEEEEEC
T ss_pred hhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc---ccHHHHHHHHHHHHhccCCCCeeeeeeEEeec
Confidence 33444567888999999999999999976 578999999986432 3346788999999999 89999999999876
Q ss_pred -----CCeEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCe
Q 004994 510 -----HGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIV 584 (720)
Q Consensus 510 -----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~ 584 (720)
.+..++||||+++++|.+++.... ...+++.....++.+++.||.|||+. +|+||||||+|||++.++.+
T Consensus 94 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~ 168 (326)
T 2x7f_A 94 NPPGMDDQLWLVMEFCGAGSVTDLIKNTK--GNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEV 168 (326)
T ss_dssp C--CCCCEEEEEEECCTTEEHHHHHHHSG--GGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCE
T ss_pred cCccccceEEEEEEcCCCCcHHHHHHhcc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCCE
Confidence 468899999999999999996432 35688899999999999999999997 99999999999999999999
Q ss_pred EEccccCCCCCCCCCCcccccCccccccCCCCccCC------CCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchh
Q 004994 585 RVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFES------GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLV 658 (720)
Q Consensus 585 kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~------~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~ 658 (720)
||+|||++....... .......++..|+|||.+. ..++.++|||||||++|||+||+.||...........+
T Consensus 169 kl~Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~ 246 (326)
T 2x7f_A 169 KLVDFGVSAQLDRTV--GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLI 246 (326)
T ss_dssp EECCCTTTC---------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH
T ss_pred EEeeCcCceecCcCc--cccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHh
Confidence 999999998764321 1123356788999999873 45899999999999999999999999653321111000
Q ss_pred hhcccccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 659 RWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 659 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.+...+... ....+..+.+++.+||+.||++|||++|++++
T Consensus 247 -------------~~~~~~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 287 (326)
T 2x7f_A 247 -------------PRNPAPRLK---SKKWSKKFQSFIESCLVKNHSQRPATEQLMKH 287 (326)
T ss_dssp -------------HHSCCCCCS---CSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred -------------hcCccccCC---ccccCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 000011110 11123578899999999999999999999874
No 216
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=6.4e-39 Score=351.38 Aligned_cols=261 Identities=24% Similarity=0.338 Sum_probs=192.2
Q ss_pred cCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEecc----C--Ce
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNE----H--GQ 512 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~----~--~~ 512 (720)
.+|...+.||+|+||+||+|.. .+|+.||||++..... .+.+|++++++++|||||+++++|.. . ..
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~------~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~ 127 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR------FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVY 127 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT------SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch------hHHHHHHHHHHcCCCCccceeeEEeccCCCCccee
Confidence 3577789999999999999976 4699999999864321 23468999999999999999998843 1 24
Q ss_pred EEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCC-CCeEEccccC
Q 004994 513 HLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEK-LIVRVSDCGL 591 (720)
Q Consensus 513 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~-~~~kl~DFGl 591 (720)
.++||||+++ ++.+.+.........+++..+..++.|+++||+|||+. +|+||||||+|||++.+ +.+||+|||+
T Consensus 128 ~~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DFG~ 203 (420)
T 1j1b_A 128 LNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGS 203 (420)
T ss_dssp EEEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCCTT
T ss_pred EEeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccchh
Confidence 6799999986 66666654333456789999999999999999999987 99999999999999965 5789999999
Q ss_pred CCCCCCCCCcccccCccccccCCCCccCCC--CCCCccchHhHHHHHHHHHhCCCCCCCCCCcccc-chhhhcccccCch
Q 004994 592 APLLFSGSTNELSEGLLTAHGSGAPEFESG--SYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQ-SLVRWAIPRLHDI 668 (720)
Q Consensus 592 a~~~~~~~~~~~~~~~~~~~~~~aPE~~~~--~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~-~~~~~~~~~~~~~ 668 (720)
|+.+..... .....++.+|+|||.+.+ .|+.++|||||||++|||++|+.||......... .+++.. . ....
T Consensus 204 a~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~l-g-~p~~ 278 (420)
T 1j1b_A 204 AKQLVRGEP---NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVL-G-TPTR 278 (420)
T ss_dssp CEECCTTCC---CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHH-C-SCCH
T ss_pred hhhcccCCC---ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh-C-CCCH
Confidence 987643322 223567899999998733 6899999999999999999999999764322111 111100 0 0000
Q ss_pred hhhhhhc-------CCCCCc-----hhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 669 DALSRMV-------DPSLDG-----AYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 669 ~~~~~~~-------~~~~~~-----~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
+.+..+- -+.... .+....+.++.+|+.+||+.||++|||+.|+++|
T Consensus 279 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~h 337 (420)
T 1j1b_A 279 EQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 337 (420)
T ss_dssp HHHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCC
Confidence 1111110 011100 0112234678999999999999999999999865
No 217
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.2e-39 Score=345.76 Aligned_cols=261 Identities=18% Similarity=0.229 Sum_probs=198.5
Q ss_pred cCCCCCCeeccCCCceEEEEEeC---------CCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeE--------
Q 004994 440 NSFSEGNFIGEGLLGSVYKAELP---------GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVE-------- 502 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~~---------~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~-------- 502 (720)
++|...+.||+|+||+||+|... +++.||||++... +.+.+|++++++++||||++
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-------~~~~~E~~~l~~l~h~niv~~~~~~~~~ 114 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-------GRLFNEQNFFQRAAKPLQVNKWKKLYST 114 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-------STHHHHHHHHHHHCCHHHHHHHHHHTTC
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-------chHHHHHHHHHHhcccchhhhhhhhccC
Confidence 57888899999999999999765 3789999998643 36789999999999999987
Q ss_pred -------EEeEecc-CCeEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCC
Q 004994 503 -------LIGYCNE-HGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSS 574 (720)
Q Consensus 503 -------l~~~~~~-~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~ 574 (720)
+++++.. .+..++||||+ +++|.+++... ....+++..+..++.|+++||+|||+. +|+||||||+
T Consensus 115 ~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~ 188 (352)
T 2jii_A 115 PLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVS--PKHVLSERSVLQVACRLLDALEFLHEN---EYVHGNVTAE 188 (352)
T ss_dssp TTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHS--GGGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCGG
T ss_pred CccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhC--CcCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHH
Confidence 5677765 67899999999 99999999643 135789999999999999999999997 9999999999
Q ss_pred CeEEcCCC--CeEEccccCCCCCCCCCCc-----ccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCC
Q 004994 575 NILLDEKL--IVRVSDCGLAPLLFSGSTN-----ELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPY 646 (720)
Q Consensus 575 NiLl~~~~--~~kl~DFGla~~~~~~~~~-----~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf 646 (720)
|||++.++ .+||+|||+++.+...... .......++..|+|||.. ...++.++|||||||++|||+||+.||
T Consensus 189 NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf 268 (352)
T 2jii_A 189 NIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPW 268 (352)
T ss_dssp GEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTT
T ss_pred HEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCc
Confidence 99999998 9999999999876432211 111334688999999998 447899999999999999999999999
Q ss_pred CCCCCccccchhhhcccccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhC
Q 004994 647 DRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCMI 720 (720)
Q Consensus 647 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~ 720 (720)
........ .+..... .+ ........+.... ....+.++.+++.+||+.||++|||++|+++.|++++
T Consensus 269 ~~~~~~~~-~~~~~~~-~~--~~~~~~~~~~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~ 335 (352)
T 2jii_A 269 TNCLPNTE-DIMKQKQ-KF--VDKPGPFVGPCGH---WIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALL 335 (352)
T ss_dssp GGGTTCHH-HHHHHHH-HH--HHSCCCEECTTSC---EECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHH
T ss_pred ccCCcCHH-HHHHHHH-hc--cCChhhhhhhccc---cCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHH
Confidence 75432111 0110000 00 0000001110000 0112367889999999999999999999999998863
No 218
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=6.4e-39 Score=342.83 Aligned_cols=265 Identities=17% Similarity=0.224 Sum_probs=201.9
Q ss_pred hcCCCCCCeeccCCCceEEEEEeCCCcEEEEEEecccccccc---------------cHHHHHHHHHHHHccCCCceeEE
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQ---------------TDEEFLELASTISRLRHGNIVEL 503 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~---------------~~~~~~~e~~~l~~l~H~niv~l 503 (720)
.++|...+.||+|+||.||+|.. +|+.||||++........ ..+.+.+|++++++++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 46788899999999999999987 899999999874322111 12789999999999999999999
Q ss_pred EeEeccCCeEEEEEeeCCCCCHHHH------hhccchhccccCHHHHHHHHHHHHHHHHHHHh-cCCCCeeecCCCCCCe
Q 004994 504 IGYCNEHGQHLLVYDYGGNCTLHDL------LHSDEEAHKKFSWNIRIRVALGAARALQYLQE-VCEPPIVHGNFKSSNI 576 (720)
Q Consensus 504 ~~~~~~~~~~~lv~e~~~~gsL~~~------l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~-~~~~~ivHrDlkp~Ni 576 (720)
++++.+.+..++||||+++++|.++ +.. .....+++..+..++.++++||.|||+ . +|+||||||+||
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~--~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~dl~p~Ni 183 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDK--NYTCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRDVKPSNI 183 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCS--SSCCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCCCCGGGE
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhh--ccccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecCCChHhE
Confidence 9999999999999999999999998 432 124678999999999999999999998 6 999999999999
Q ss_pred EEcCCCCeEEccccCCCCCCCCCCcccccCccccccCCCCccCCC--CCCC-ccchHhHHHHHHHHHhCCCCCCCCCCcc
Q 004994 577 LLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFESG--SYSC-QSDVYSLGVVMLELLTGRKPYDRSRPRG 653 (720)
Q Consensus 577 Ll~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~--~~~~-~~Dv~S~Gvvl~elltG~~Pf~~~~~~~ 653 (720)
+++.++.+||+|||++...... ......++..|+|||...+ .++. ++|||||||++|||++|+.||.......
T Consensus 184 l~~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~ 259 (348)
T 2pml_X 184 LMDKNGRVKLSDFGESEYMVDK----KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLV 259 (348)
T ss_dssp EECTTSCEEECCCTTCEECBTT----EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSH
T ss_pred EEcCCCcEEEeccccccccccc----cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHH
Confidence 9999999999999999876332 2234567889999999844 4555 9999999999999999999997644311
Q ss_pred -ccchhhhcccccCchhhhhhhcCCCCC---chhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 654 -EQSLVRWAIPRLHDIDALSRMVDPSLD---GAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 654 -~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
....+......... .......+... .......+.++.+++.+||+.||++|||++|++++
T Consensus 260 ~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~h 323 (348)
T 2pml_X 260 ELFNNIRTKNIEYPL--DRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKH 323 (348)
T ss_dssp HHHHHHTSCCCCCCC--SSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred HHHHHHhccCcCCcc--chhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 11111000000000 00000000000 00112234678899999999999999999999874
No 219
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=2.7e-38 Score=332.89 Aligned_cols=251 Identities=22% Similarity=0.374 Sum_probs=196.6
Q ss_pred HhcCCCCCCeeccCCCceEEEEEeC-CCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEE
Q 004994 438 YTNSFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLV 516 (720)
Q Consensus 438 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 516 (720)
..+.|...+.||+|+||.||+|... +|+.||||++... ...+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 102 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVE----SDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIV 102 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETT----SCCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCch----HHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEE
Confidence 4567888899999999999999664 6999999999753 2346788999999999999999999999999999999
Q ss_pred EeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCC
Q 004994 517 YDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLF 596 (720)
Q Consensus 517 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~ 596 (720)
|||+++++|.+++.. ....+++..+..++.+++.||.|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 103 ~e~~~~~~L~~~~~~---~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~ 176 (314)
T 3com_A 103 MEYCGAGSVSDIIRL---RNKTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQLT 176 (314)
T ss_dssp EECCTTEEHHHHHHH---HTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECB
T ss_pred eecCCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeecccchhhh
Confidence 999999999999852 245689999999999999999999997 99999999999999999999999999997664
Q ss_pred CCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhc
Q 004994 597 SGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMV 675 (720)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (720)
... .......++..|+|||.. ...++.++||||||+++|||++|+.||........... .....
T Consensus 177 ~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~-------------~~~~~ 241 (314)
T 3com_A 177 DTM--AKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFM-------------IPTNP 241 (314)
T ss_dssp TTB--SCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHH-------------HHHSC
T ss_pred hhc--cccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHH-------------HhcCC
Confidence 321 122335678899999998 45689999999999999999999999975332111000 00000
Q ss_pred CCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 676 DPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 676 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.+... .+...+..+.+++.+||+.||.+|||+.|++++
T Consensus 242 ~~~~~--~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~ 279 (314)
T 3com_A 242 PPTFR--KPELWSDNFTDFVKQCLVKSPEQRATATQLLQH 279 (314)
T ss_dssp CCCCS--SGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred CcccC--CcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 11111 112234678899999999999999999999864
No 220
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=2e-38 Score=335.66 Aligned_cols=269 Identities=19% Similarity=0.297 Sum_probs=198.0
Q ss_pred HhcCCCCCCeeccCCCceEEEEEe--CCCcEEEEEEecccccccccHHHHHHHHHHHHcc---CCCceeEEEeEec----
Q 004994 438 YTNSFSEGNFIGEGLLGSVYKAEL--PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRL---RHGNIVELIGYCN---- 508 (720)
Q Consensus 438 ~~~~~~~~~~lg~G~~g~Vy~~~~--~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l---~H~niv~l~~~~~---- 508 (720)
+.++|...+.||+|+||.||+|.. .+|+.||||++............+.+|+++++.+ +||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 457889999999999999999976 4689999999875433222233556677766665 8999999999986
Q ss_pred -cCCeEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEc
Q 004994 509 -EHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVS 587 (720)
Q Consensus 509 -~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~ 587 (720)
.....++||||++ |+|.+++.... ...+++..+..++.++++||.|||+. +|+||||||+||+++.++.+||+
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~l~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~kl~ 162 (326)
T 1blx_A 89 DRETKLTLVFEHVD-QDLTTYLDKVP--EPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLA 162 (326)
T ss_dssp SSEEEEEEEEECCS-CBHHHHHHHSC--TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEEC
T ss_pred CCCceEEEEEecCC-CCHHHHHHhcc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCEEEe
Confidence 5567899999998 59999886432 23588999999999999999999997 99999999999999999999999
Q ss_pred cccCCCCCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccc-hhhhc-ccc
Q 004994 588 DCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQS-LVRWA-IPR 664 (720)
Q Consensus 588 DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~-~~~~~-~~~ 664 (720)
|||+++..... .......++..|+|||.. .+.++.++|||||||++|||+||+.||.......... +.... .+.
T Consensus 163 Dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~ 239 (326)
T 1blx_A 163 DFGLARIYSFQ---MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPG 239 (326)
T ss_dssp SCCSCCCCCGG---GGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCC
T ss_pred cCcccccccCC---CCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCC
Confidence 99999876322 122345678899999988 5578999999999999999999999997643221111 10000 000
Q ss_pred cCchh----hhhhhcC---CCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 665 LHDID----ALSRMVD---PSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 665 ~~~~~----~~~~~~~---~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
..++. ....... ...........+..+.+++.+||+.||++|||+.|++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 297 (326)
T 1blx_A 240 EEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 297 (326)
T ss_dssp GGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred cccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 00000 0000000 000011112234678899999999999999999999864
No 221
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=5.3e-39 Score=349.10 Aligned_cols=262 Identities=21% Similarity=0.337 Sum_probs=192.3
Q ss_pred hcCCCCCCeeccCCCceEEEEEeCCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCC------e
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHG------Q 512 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~------~ 512 (720)
..+|...+.||+|+||+||+|....+..||+|++..... ...+|+++++.++||||+++++++...+ .
T Consensus 39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~------~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~ 112 (394)
T 4e7w_A 39 EIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR------FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVF 112 (394)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT------SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEE
T ss_pred cceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc------hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceE
Confidence 346888899999999999999887777799998864321 1236899999999999999999985432 3
Q ss_pred EEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEc-CCCCeEEccccC
Q 004994 513 HLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLD-EKLIVRVSDCGL 591 (720)
Q Consensus 513 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~-~~~~~kl~DFGl 591 (720)
.++||||++++.+ +.+.........+++..+..++.|+++||+|||+. +|+||||||+|||++ .++.+||+|||+
T Consensus 113 ~~lv~e~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG~ 188 (394)
T 4e7w_A 113 LNLVLEYVPETVY-RASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGS 188 (394)
T ss_dssp EEEEEECCSEEHH-HHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTT
T ss_pred EEEEeeccCccHH-HHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCCC
Confidence 7899999997544 33332223356789999999999999999999997 999999999999999 799999999999
Q ss_pred CCCCCCCCCcccccCccccccCCCCccCCC--CCCCccchHhHHHHHHHHHhCCCCCCCCCCccccc-hhhhcccccCch
Q 004994 592 APLLFSGSTNELSEGLLTAHGSGAPEFESG--SYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQS-LVRWAIPRLHDI 668 (720)
Q Consensus 592 a~~~~~~~~~~~~~~~~~~~~~~aPE~~~~--~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~-~~~~~~~~~~~~ 668 (720)
|+.+..... .....++++|+|||.+.+ .++.++|||||||++|||++|+.||.......... +++... ....
T Consensus 189 a~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g--~p~~ 263 (394)
T 4e7w_A 189 AKILIAGEP---NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLG--TPSR 263 (394)
T ss_dssp CEECCTTCC---CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHC--CCCH
T ss_pred cccccCCCC---CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhC--CCCH
Confidence 987643322 223567889999998733 58999999999999999999999997644221111 111000 0000
Q ss_pred hhhhh----hcC---CCCC-----chhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 669 DALSR----MVD---PSLD-----GAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 669 ~~~~~----~~~---~~~~-----~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
+.+.. ... +... ..+....++++.+|+.+||+.||++|||+.|+++|
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 322 (394)
T 4e7w_A 264 EQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH 322 (394)
T ss_dssp HHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred HHHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcC
Confidence 00000 000 0000 01111234678999999999999999999999875
No 222
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=1.7e-38 Score=342.51 Aligned_cols=263 Identities=19% Similarity=0.300 Sum_probs=197.2
Q ss_pred HhcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeE---
Q 004994 438 YTNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQH--- 513 (720)
Q Consensus 438 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~--- 513 (720)
..++|...+.||+|+||+||+|.. .+|+.||||++..........+.+.+|+++++.++||||+++++++...+..
T Consensus 40 l~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 119 (371)
T 4exu_A 40 LPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF 119 (371)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTC
T ss_pred ccccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccc
Confidence 346788889999999999999965 5799999999986554455567889999999999999999999999876654
Q ss_pred ---EEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEcccc
Q 004994 514 ---LLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCG 590 (720)
Q Consensus 514 ---~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFG 590 (720)
++||||+. ++|.+++. ..+++..+..++.+++.||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 120 ~~~~lv~e~~~-~~l~~~~~------~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Dfg 189 (371)
T 4exu_A 120 YDFYLVMPFMQ-TDLQKIMG------MEFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFG 189 (371)
T ss_dssp CCCEEEEECCC-EEHHHHTT------SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECSTT
T ss_pred eeEEEEEcccc-ccHHHHhh------cCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEecC
Confidence 99999998 58887763 3488999999999999999999997 99999999999999999999999999
Q ss_pred CCCCCCCCCCcccccCccccccCCCCccCC--CCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchh-hhcc-----
Q 004994 591 LAPLLFSGSTNELSEGLLTAHGSGAPEFES--GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLV-RWAI----- 662 (720)
Q Consensus 591 la~~~~~~~~~~~~~~~~~~~~~~aPE~~~--~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~-~~~~----- 662 (720)
+++..... .....++.+|+|||.+. ..++.++|||||||++|||+||+.||...........+ ....
T Consensus 190 ~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~ 264 (371)
T 4exu_A 190 LARHADAE-----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTE 264 (371)
T ss_dssp CC-------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHH
T ss_pred cccccccC-----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHH
Confidence 99865322 22356789999999874 47899999999999999999999999764322111100 0000
Q ss_pred --cccCch--hhhhhhcCCCCCch---hhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 663 --PRLHDI--DALSRMVDPSLDGA---YLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 663 --~~~~~~--~~~~~~~~~~~~~~---~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
..+.+. ....+.+....... .....+.++.+|+.+||+.||++|||++|++++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 265 FVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp HHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 000000 00000001000000 111234678999999999999999999999875
No 223
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=2.9e-38 Score=330.03 Aligned_cols=255 Identities=22% Similarity=0.302 Sum_probs=201.6
Q ss_pred HHhcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccc-------cccHHHHHHHHHHHHccC-CCceeEEEeEe
Q 004994 437 QYTNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQ-------RQTDEEFLELASTISRLR-HGNIVELIGYC 507 (720)
Q Consensus 437 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~-------~~~~~~~~~e~~~l~~l~-H~niv~l~~~~ 507 (720)
.+.++|...+.||+|+||.||+|.. .+|+.||||++...... ....+.+.+|+++++++. ||||+++++++
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~ 93 (298)
T 1phk_A 14 GFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTY 93 (298)
T ss_dssp -CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred chhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeee
Confidence 3467888899999999999999966 46899999999643211 123467889999999995 99999999999
Q ss_pred ccCCeEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEc
Q 004994 508 NEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVS 587 (720)
Q Consensus 508 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~ 587 (720)
.+.+..++||||+++++|.+++.. ...+++..+..++.++++||.|||+. +|+||||||+||+++.++.+||+
T Consensus 94 ~~~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~ 166 (298)
T 1phk_A 94 ETNTFFFLVFDLMKKGELFDYLTE----KVTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLT 166 (298)
T ss_dssp ECSSEEEEEEECCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEEC
T ss_pred ccCCeEEEEEeccCCCcHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCCCcEEEe
Confidence 999999999999999999999853 35688999999999999999999997 99999999999999999999999
Q ss_pred cccCCCCCCCCCCcccccCccccccCCCCccC-------CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhh
Q 004994 588 DCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE-------SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRW 660 (720)
Q Consensus 588 DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~-------~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~ 660 (720)
|||++....... ......++..|+|||.. ...++.++||||||+++|||++|+.||...........+.
T Consensus 167 dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~- 242 (298)
T 1phk_A 167 DFGFSCQLDPGE---KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIM- 242 (298)
T ss_dssp CCTTCEECCTTC---CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH-
T ss_pred cccchhhcCCCc---ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHHHh-
Confidence 999998764332 22335678899999986 2457899999999999999999999996533211100000
Q ss_pred cccccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 661 AIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
... ...........+.++.+++.+||+.||++|||++|++++
T Consensus 243 -----------~~~--~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (298)
T 1phk_A 243 -----------SGN--YQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAH 284 (298)
T ss_dssp -----------HTC--CCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred -----------cCC--cccCcccccccCHHHHHHHHHHccCCcccCCCHHHHHhC
Confidence 000 000001112234678899999999999999999999864
No 224
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=2.1e-38 Score=340.51 Aligned_cols=272 Identities=21% Similarity=0.271 Sum_probs=188.8
Q ss_pred HHHHHHhcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCC
Q 004994 433 ASLQQYTNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHG 511 (720)
Q Consensus 433 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~ 511 (720)
.......++|...+.||+|+||+||+|.. .+|+.||||++.... .....+.++++.++.++||||+++++++...+
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~ 92 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP---RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLG 92 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT---TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEEC
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc---cccHHHHHHHHHHHhcCCCCcccHHHhhhccc
Confidence 34556678999999999999999999976 568999999986432 22345677888889999999999999985433
Q ss_pred -------eEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcC-CCC
Q 004994 512 -------QHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDE-KLI 583 (720)
Q Consensus 512 -------~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~-~~~ 583 (720)
..++||||+++ +|.+.+.........+++.....++.+++.||.|||. |..+|+||||||+|||++. ++.
T Consensus 93 ~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~-~~~~ivH~Dlkp~NIll~~~~~~ 170 (360)
T 3e3p_A 93 ERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHL-PSVNVCHRDIKPHNVLVNEADGT 170 (360)
T ss_dssp SSCTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTS-TTTCCBCSCCCGGGEEEETTTTE
T ss_pred cccccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhC-CCCCeecCcCCHHHEEEeCCCCc
Confidence 37899999997 5555444322345678889999999999999999992 2349999999999999997 899
Q ss_pred eEEccccCCCCCCCCCCcccccCccccccCCCCccCC--CCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccc-hhhh
Q 004994 584 VRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFES--GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQS-LVRW 660 (720)
Q Consensus 584 ~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~--~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~-~~~~ 660 (720)
+||+|||+++.+..... .....++..|+|||.+. ..++.++|||||||++|||+||+.||.......... +.+.
T Consensus 171 ~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~ 247 (360)
T 3e3p_A 171 LKLCDFGSAKKLSPSEP---NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRV 247 (360)
T ss_dssp EEECCCTTCBCCCTTSC---CCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHH
T ss_pred EEEeeCCCceecCCCCC---cccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHH
Confidence 99999999987643322 22356788999999873 348999999999999999999999997644322111 1110
Q ss_pred cccccCchhhhhhhcCCCCC----------------chhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 661 AIPRLHDIDALSRMVDPSLD----------------GAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.. ....+.+..+ ++... .......+.++.+|+.+||+.||.+|||+.|+++|
T Consensus 248 ~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 315 (360)
T 3e3p_A 248 LG--CPSREVLRKL-NPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCH 315 (360)
T ss_dssp HC--CCCHHHHHHH-CTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred cC--CCCHHHHHhc-ccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 00 0000011100 00000 00011135678999999999999999999999875
No 225
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=1.4e-38 Score=333.09 Aligned_cols=253 Identities=20% Similarity=0.328 Sum_probs=196.3
Q ss_pred HhcCCCCCCeeccCCCceEEEEEeC-CCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEE
Q 004994 438 YTNSFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLV 516 (720)
Q Consensus 438 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 516 (720)
..+.|+..+.||+|+||+||+|... +++.||+|++... .....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 94 (302)
T 2j7t_A 17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETK--SEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIM 94 (302)
T ss_dssp GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC------CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEE
T ss_pred CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCC--CHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEE
Confidence 3467888899999999999999764 6899999998643 234567899999999999999999999999999999999
Q ss_pred EeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCC
Q 004994 517 YDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLF 596 (720)
Q Consensus 517 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~ 596 (720)
|||+++++|.+++.. ....+++..+..++.++++||.|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 95 ~e~~~~~~l~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 168 (302)
T 2j7t_A 95 IEFCPGGAVDAIMLE---LDRGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNL 168 (302)
T ss_dssp EECCTTEEHHHHHHH---HTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHHHHHH
T ss_pred EEeCCCCcHHHHHHh---hccCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCCcccc
Confidence 999999999998853 235689999999999999999999997 99999999999999999999999999875321
Q ss_pred CCCCcccccCccccccCCCCccC------CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhh
Q 004994 597 SGSTNELSEGLLTAHGSGAPEFE------SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDA 670 (720)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~aPE~~------~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~ 670 (720)
.. ........++..|+|||.. ...++.++||||||+++|||++|+.||......... ....
T Consensus 169 ~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~--~~~~--------- 235 (302)
T 2j7t_A 169 KT--LQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVL--LKIA--------- 235 (302)
T ss_dssp HH--HHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH--HHHH---------
T ss_pred cc--ccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHH--HHHh---------
Confidence 11 1112234678899999986 456899999999999999999999999754321110 0000
Q ss_pred hhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 671 LSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 671 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
....+.. ..+...+.++.+++.+||+.||++|||++|++++
T Consensus 236 --~~~~~~~--~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 276 (302)
T 2j7t_A 236 --KSDPPTL--LTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEH 276 (302)
T ss_dssp --HSCCCCC--SSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTS
T ss_pred --ccCCccc--CCccccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 0000000 0112234578899999999999999999999864
No 226
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=3e-38 Score=339.78 Aligned_cols=266 Identities=20% Similarity=0.278 Sum_probs=200.3
Q ss_pred hcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccC-----Ce
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEH-----GQ 512 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~-----~~ 512 (720)
.++|...+.||+|+||.||+|.. .+++.||||++.... .....+.+.+|++++++++||||+++++++... ..
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 104 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE-HQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD 104 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTT-CHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCC
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEecccc-CcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccce
Confidence 45788899999999999999965 578999999997432 234457789999999999999999999998654 47
Q ss_pred EEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCC
Q 004994 513 HLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLA 592 (720)
Q Consensus 513 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla 592 (720)
.++||||+++ +|.+++.. ..+++..+..++.+++.||+|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 105 ~~iv~e~~~~-~L~~~l~~-----~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a 175 (364)
T 3qyz_A 105 VYIVQDLMET-DLYKLLKT-----QHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLA 175 (364)
T ss_dssp EEEEEECCSE-EHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEcccCc-CHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCcce
Confidence 8999999985 89988842 4588999999999999999999997 9999999999999999999999999999
Q ss_pred CCCCCCCCc-ccccCccccccCCCCccC--CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchh
Q 004994 593 PLLFSGSTN-ELSEGLLTAHGSGAPEFE--SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDID 669 (720)
Q Consensus 593 ~~~~~~~~~-~~~~~~~~~~~~~aPE~~--~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 669 (720)
+........ .......++++|+|||.+ ...++.++|||||||++|||+||+.||...........+....... ..+
T Consensus 176 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~-~~~ 254 (364)
T 3qyz_A 176 RVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP-SQE 254 (364)
T ss_dssp EECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSC-CHH
T ss_pred EecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCC-CHH
Confidence 876432211 122345789999999976 3458999999999999999999999997654332211111000000 000
Q ss_pred hhhh------------hcCCCCC--chhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 670 ALSR------------MVDPSLD--GAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 670 ~~~~------------~~~~~~~--~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.... ...+... .........++.+|+.+||+.||++|||++|++++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 314 (364)
T 3qyz_A 255 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314 (364)
T ss_dssp HHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0000 0000000 00111234678899999999999999999999875
No 227
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=6.1e-38 Score=342.45 Aligned_cols=267 Identities=21% Similarity=0.309 Sum_probs=180.5
Q ss_pred CCCC-CCeeccCCCceEEEEEeC---CCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEe--ccCCeEE
Q 004994 441 SFSE-GNFIGEGLLGSVYKAELP---GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYC--NEHGQHL 514 (720)
Q Consensus 441 ~~~~-~~~lg~G~~g~Vy~~~~~---~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~--~~~~~~~ 514 (720)
.|.. +++||+|+||+||+|... +++.||||++.... ..+.+.+|++++++++|||||++++++ ......+
T Consensus 21 ~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~----~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~ 96 (405)
T 3rgf_A 21 LFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG----ISMSACREIALLRELKHPNVISLQKVFLSHADRKVW 96 (405)
T ss_dssp HEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS----CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEE
T ss_pred hhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC----CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEE
Confidence 3544 568999999999999764 57899999997432 234688999999999999999999999 4577899
Q ss_pred EEEeeCCCCCHHHHhhccch-----hccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEE----cCCCCeE
Q 004994 515 LVYDYGGNCTLHDLLHSDEE-----AHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILL----DEKLIVR 585 (720)
Q Consensus 515 lv~e~~~~gsL~~~l~~~~~-----~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl----~~~~~~k 585 (720)
+||||+++ +|.+++..... ....+++..+..++.+++.||+|||+. +||||||||+|||+ +.++.+|
T Consensus 97 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~k 172 (405)
T 3rgf_A 97 LLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVK 172 (405)
T ss_dssp EEEECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTTCEE
T ss_pred EEEeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCCcEE
Confidence 99999985 78877753221 122489999999999999999999997 89999999999999 7789999
Q ss_pred EccccCCCCCCCCCC-cccccCccccccCCCCccCCC--CCCCccchHhHHHHHHHHHhCCCCCCCCCCcccc------c
Q 004994 586 VSDCGLAPLLFSGST-NELSEGLLTAHGSGAPEFESG--SYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQ------S 656 (720)
Q Consensus 586 l~DFGla~~~~~~~~-~~~~~~~~~~~~~~aPE~~~~--~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~------~ 656 (720)
|+|||+|+.+..... ........+|.+|+|||.+.+ .++.++|||||||++|||+||+.||......... .
T Consensus 173 l~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~ 252 (405)
T 3rgf_A 173 IADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHD 252 (405)
T ss_dssp ECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHH
T ss_pred EEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHH
Confidence 999999987643211 122234568999999998743 5899999999999999999999999654321100 0
Q ss_pred hhhh-----cccccCchhhhhhh---------cC-CCCCchh--------hHHHHHHHHHHHHHHhccCCCCCCCHHHHH
Q 004994 657 LVRW-----AIPRLHDIDALSRM---------VD-PSLDGAY--------LAKSLSRFADIISRCVQWEPGFRPPMSEIV 713 (720)
Q Consensus 657 ~~~~-----~~~~~~~~~~~~~~---------~~-~~~~~~~--------~~~~~~~l~~l~~~cl~~dP~~RPt~~evl 713 (720)
.... ..+....+..+..+ +. ....... .......+.+|+.+||+.||++|||++|++
T Consensus 253 ~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L 332 (405)
T 3rgf_A 253 QLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAM 332 (405)
T ss_dssp HHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHH
T ss_pred HHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHh
Confidence 0000 00000000000000 00 0000000 000135678999999999999999999999
Q ss_pred HH
Q 004994 714 QD 715 (720)
Q Consensus 714 ~~ 715 (720)
+|
T Consensus 333 ~h 334 (405)
T 3rgf_A 333 QD 334 (405)
T ss_dssp TS
T ss_pred cC
Confidence 75
No 228
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=1.7e-38 Score=340.25 Aligned_cols=267 Identities=21% Similarity=0.314 Sum_probs=197.7
Q ss_pred hcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccC-----Ce
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEH-----GQ 512 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~-----~~ 512 (720)
.++|...+.||+|+||+||+|.. .+|+.||||++.... .......+.+|++++++++||||+++++++... ..
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 88 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFD-KPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNE 88 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCS-SHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCC
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccc-cchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccce
Confidence 46788889999999999999976 469999999996432 234456788999999999999999999988653 67
Q ss_pred EEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCC
Q 004994 513 HLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLA 592 (720)
Q Consensus 513 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla 592 (720)
.++||||+. ++|.+++.. ..+++..+..++.++++||+|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 89 ~~lv~e~~~-~~L~~~~~~-----~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a 159 (353)
T 2b9h_A 89 VYIIQELMQ-TDLHRVIST-----QMLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLA 159 (353)
T ss_dssp EEEEECCCS-EEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEeccC-ccHHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEecccc
Confidence 899999998 589888852 4688999999999999999999997 9999999999999999999999999999
Q ss_pred CCCCCCCCcc--------cccCccccccCCCCccC--CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcc
Q 004994 593 PLLFSGSTNE--------LSEGLLTAHGSGAPEFE--SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAI 662 (720)
Q Consensus 593 ~~~~~~~~~~--------~~~~~~~~~~~~aPE~~--~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~ 662 (720)
+......... ......++..|+|||.+ ...++.++|||||||++|||++|+.||...........+....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~ 239 (353)
T 2b9h_A 160 RIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGII 239 (353)
T ss_dssp EECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHH
T ss_pred cccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHh
Confidence 8764322110 11234678899999976 3578999999999999999999999997643221111000000
Q ss_pred cccC--------chhhhhhhcC--CCC----CchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 663 PRLH--------DIDALSRMVD--PSL----DGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 663 ~~~~--------~~~~~~~~~~--~~~----~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.... ......+.+. +.. ........+.++.+++.+||+.||++|||++|++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (353)
T 2b9h_A 240 GTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH 306 (353)
T ss_dssp CCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred CCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 0000 0000000000 000 000112234678899999999999999999999875
No 229
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=3.3e-38 Score=334.35 Aligned_cols=257 Identities=25% Similarity=0.358 Sum_probs=178.2
Q ss_pred cCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHH-HHHccCCCceeEEEeEeccCCeEEEEE
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELAS-TISRLRHGNIVELIGYCNEHGQHLLVY 517 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~-~l~~l~H~niv~l~~~~~~~~~~~lv~ 517 (720)
++|...+.||+|+||.||+|.. .+|+.||||++...... ....++..|+. +++.++||||+++++++.+.+..++||
T Consensus 22 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~ 100 (327)
T 3aln_A 22 EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDE-KEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM 100 (327)
T ss_dssp CSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCH-HHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCc-hHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence 5788889999999999999976 47999999999755332 23344555555 778889999999999999999999999
Q ss_pred eeCCCCCHHHHhhccch-hccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCC
Q 004994 518 DYGGNCTLHDLLHSDEE-AHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLF 596 (720)
Q Consensus 518 e~~~~gsL~~~l~~~~~-~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~ 596 (720)
||+++ +|.+++..... ....+++..+..++.++++||.|||+. .+|+||||||+|||++.++.+||+|||+++...
T Consensus 101 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~--~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~ 177 (327)
T 3aln_A 101 ELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKEN--LKIIHRDIKPSNILLDRSGNIKLCDFGISGQLV 177 (327)
T ss_dssp CCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHH--HSCCCSCCCGGGEEEETTTEEEECCCSSSCC--
T ss_pred eecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhcc--CCEeECCCCHHHEEEcCCCCEEEccCCCceecc
Confidence 99986 78777753211 245688999999999999999999984 279999999999999999999999999998764
Q ss_pred CCCCcccccCccccccCCCCccC-----CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhh
Q 004994 597 SGSTNELSEGLLTAHGSGAPEFE-----SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDAL 671 (720)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~aPE~~-----~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (720)
... ......++..|+|||.+ ...++.++|||||||++|||++|+.||......... .... ...
T Consensus 178 ~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~-~~~~----~~~---- 245 (327)
T 3aln_A 178 DSI---AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQ-LTQV----VKG---- 245 (327)
T ss_dssp -------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC--------CCC----CCS----
T ss_pred ccc---ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHH-HHHH----hcC----
Confidence 322 12223678899999997 235899999999999999999999999753211100 0000 000
Q ss_pred hhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 672 SRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 672 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
..+.+........+.++.+++.+||+.||++|||+.|++++
T Consensus 246 ---~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 286 (327)
T 3aln_A 246 ---DPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKH 286 (327)
T ss_dssp ---CCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred ---CCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhC
Confidence 00111111111233578899999999999999999999864
No 230
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=4.3e-38 Score=362.47 Aligned_cols=256 Identities=23% Similarity=0.338 Sum_probs=200.3
Q ss_pred hcCCCCCCeeccCCCceEEEEEeC----CCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEE
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAELP----GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHL 514 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~~----~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~ 514 (720)
.++|...+.||+|+||+||+|... .+..||||++.... .....+.|.+|+.++++++||||+++++++.+ +..+
T Consensus 389 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~-~~~~ 466 (656)
T 2j0j_A 389 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCT-SDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVW 466 (656)
T ss_dssp GGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTT-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCE
T ss_pred cccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccC-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec-CceE
Confidence 456788899999999999999763 25679999987532 23445789999999999999999999999854 5689
Q ss_pred EEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCC
Q 004994 515 LVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPL 594 (720)
Q Consensus 515 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~ 594 (720)
+||||+++|+|.+++... ...+++..+..++.++++||.|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 467 lv~E~~~~g~L~~~l~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~DFG~a~~ 540 (656)
T 2j0j_A 467 IIMELCTLGELRSFLQVR---KFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRY 540 (656)
T ss_dssp EEEECCTTCBHHHHHHHT---TTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCCCCS
T ss_pred EEEEcCCCCcHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEEecCCCee
Confidence 999999999999999632 34688999999999999999999997 999999999999999999999999999987
Q ss_pred CCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcccccCchhhhh
Q 004994 595 LFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHDIDALS 672 (720)
Q Consensus 595 ~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (720)
....... ......++..|+|||.+ ...++.++|||||||++|||++ |+.||........ ... +.
T Consensus 541 ~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~---~~~----------i~ 606 (656)
T 2j0j_A 541 MEDSTYY-KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV---IGR----------IE 606 (656)
T ss_dssp CCC-----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH---HHH----------HH
T ss_pred cCCCcce-eccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHH---HHH----------HH
Confidence 6433221 22233456789999998 5679999999999999999997 9999975432111 100 00
Q ss_pred hhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhC
Q 004994 673 RMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCMI 720 (720)
Q Consensus 673 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~ 720 (720)
...... .+..++..+.+++.+||+.||++|||+.|+++.|++++
T Consensus 607 ~~~~~~----~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il 650 (656)
T 2j0j_A 607 NGERLP----MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL 650 (656)
T ss_dssp HTCCCC----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred cCCCCC----CCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 000000 11223467889999999999999999999999999863
No 231
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=8.3e-38 Score=332.46 Aligned_cols=263 Identities=19% Similarity=0.323 Sum_probs=199.8
Q ss_pred hcCCCCCCeeccCCCceEEEEEe--CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCc------eeEEEeEeccC
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAEL--PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGN------IVELIGYCNEH 510 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~--~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~n------iv~l~~~~~~~ 510 (720)
.++|...+.||+|+||+||+|.. .+++.||||++... ....+.+.+|+++++.++|++ ++++++++.+.
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~ 89 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV---DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHH 89 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS---HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEET
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC---CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccC
Confidence 46788899999999999999965 46899999999643 234567889999998887664 99999999999
Q ss_pred CeEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcC----------
Q 004994 511 GQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDE---------- 580 (720)
Q Consensus 511 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~---------- 580 (720)
+..++||||+ +++|.+++... ....+++..+..++.|+++||+|||+. +|+||||||+|||++.
T Consensus 90 ~~~~lv~e~~-~~~l~~~l~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~~~ 163 (339)
T 1z57_A 90 GHICIVFELL-GLSTYDFIKEN--GFLPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPK 163 (339)
T ss_dssp TEEEEEEECC-CCBHHHHHHHT--TTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEEEEC--
T ss_pred CcEEEEEcCC-CCCHHHHHHhc--CCCCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeccccccccCCc
Confidence 9999999999 78999988643 224688999999999999999999997 9999999999999987
Q ss_pred ---------CCCeEEccccCCCCCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCC
Q 004994 581 ---------KLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSR 650 (720)
Q Consensus 581 ---------~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~ 650 (720)
++.+||+|||+++..... .....++..|+|||.. ...++.++|||||||++|||+||+.||....
T Consensus 164 ~~~~~~~~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~ 238 (339)
T 1z57_A 164 IKRDERTLINPDIKVVDFGSATYDDEH-----HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHD 238 (339)
T ss_dssp --CEEEEESCCCEEECCCSSCEETTSC-----CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSC
T ss_pred cccccccccCCCceEeeCcccccCccc-----cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC
Confidence 678999999999765322 2235678999999998 4578999999999999999999999997644
Q ss_pred CccccchhhhcccccCch-------------------------hhhhhhcCCCCC-chhhHHHHHHHHHHHHHHhccCCC
Q 004994 651 PRGEQSLVRWAIPRLHDI-------------------------DALSRMVDPSLD-GAYLAKSLSRFADIISRCVQWEPG 704 (720)
Q Consensus 651 ~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~-~~~~~~~~~~l~~l~~~cl~~dP~ 704 (720)
.......+......+... ....+...+... .......++++.+++.+||+.||+
T Consensus 239 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~ 318 (339)
T 1z57_A 239 SKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPA 318 (339)
T ss_dssp HHHHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTT
T ss_pred hHHHHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcc
Confidence 322111111111000000 000000000000 001224567889999999999999
Q ss_pred CCCCHHHHHHH
Q 004994 705 FRPPMSEIVQD 715 (720)
Q Consensus 705 ~RPt~~evl~~ 715 (720)
+|||++|++++
T Consensus 319 ~Rpt~~ell~h 329 (339)
T 1z57_A 319 KRITLREALKH 329 (339)
T ss_dssp TSCCHHHHTTS
T ss_pred cccCHHHHhcC
Confidence 99999999865
No 232
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=5e-38 Score=331.47 Aligned_cols=265 Identities=21% Similarity=0.322 Sum_probs=191.9
Q ss_pred hcCCCCCCeeccCCCceEEEEEeC-CCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEec---------
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCN--------- 508 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~--------- 508 (720)
.++|...+.||+|+||.||+|... +|+.||||++... .....+.+.+|++++++++||||+++++++.
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 87 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLT--DPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDD 87 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECC--SHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC-
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecC--ChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccc
Confidence 467888899999999999999765 5999999998643 2345578899999999999999999999873
Q ss_pred -----cCCeEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEc-CCC
Q 004994 509 -----EHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLD-EKL 582 (720)
Q Consensus 509 -----~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~-~~~ 582 (720)
+....++||||++ |+|.+++.. ..+++.....++.++++||+|||+. +|+||||||+|||++ +++
T Consensus 88 ~~~~~~~~~~~lv~e~~~-~~L~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~ 158 (320)
T 2i6l_A 88 VGSLTELNSVYIVQEYME-TDLANVLEQ-----GPLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDL 158 (320)
T ss_dssp ---CCSCSEEEEEEECCS-EEHHHHHTT-----CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTT
T ss_pred cccccccCceeEEeeccC-CCHHHHhhc-----CCccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCC
Confidence 3467899999998 599998853 4578899999999999999999997 999999999999997 567
Q ss_pred CeEEccccCCCCCCCCCC-cccccCccccccCCCCccC-C-CCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhh
Q 004994 583 IVRVSDCGLAPLLFSGST-NELSEGLLTAHGSGAPEFE-S-GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVR 659 (720)
Q Consensus 583 ~~kl~DFGla~~~~~~~~-~~~~~~~~~~~~~~aPE~~-~-~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~ 659 (720)
.+||+|||+++....... ........++..|+|||.. . ..++.++|||||||++|||+||+.||...........+.
T Consensus 159 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~ 238 (320)
T 2i6l_A 159 VLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLIL 238 (320)
T ss_dssp EEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred eEEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 999999999987643211 1112234568889999987 3 578999999999999999999999997644322111111
Q ss_pred hcccccCchhhhhhhc------------CCCCC-chhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 660 WAIPRLHDIDALSRMV------------DPSLD-GAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 660 ~~~~~~~~~~~~~~~~------------~~~~~-~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
...+.... +...++. .+... .......+.++.+++.+||+.||++|||++|++++
T Consensus 239 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (320)
T 2i6l_A 239 ESIPVVHE-EDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSH 306 (320)
T ss_dssp HHSCCCCH-HHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred HhcCCCch-hhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCC
Confidence 11111100 0000000 01000 01112235678999999999999999999999875
No 233
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=4.9e-38 Score=328.65 Aligned_cols=253 Identities=24% Similarity=0.370 Sum_probs=190.9
Q ss_pred HhcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEecc-------
Q 004994 438 YTNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNE------- 509 (720)
Q Consensus 438 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~------- 509 (720)
+.++|+..+.||+|+||.||+|.. .+|+.||||++... ....+.+.+|++++++++||||+++++++.+
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (303)
T 1zy4_A 4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT---EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKP 80 (303)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE---HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC-
T ss_pred ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc---HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhh
Confidence 456788889999999999999975 57999999999642 3345778999999999999999999998754
Q ss_pred ------CCeEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCC
Q 004994 510 ------HGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLI 583 (720)
Q Consensus 510 ------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~ 583 (720)
.+..++||||+++|+|.+++... ...+++..+..++.++++||+|||+. +|+||||||+|||++.++.
T Consensus 81 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~ 154 (303)
T 1zy4_A 81 MTAVKKKSTLFIQMEYCENGTLYDLIHSE---NLNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRN 154 (303)
T ss_dssp -----CEEEEEEEEECCCSCBHHHHHHHS---CGGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSC
T ss_pred hcccccCCceEEEEecCCCCCHHHhhhcc---ccccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCC
Confidence 35789999999999999999632 34577888999999999999999997 9999999999999999999
Q ss_pred eEEccccCCCCCCCCCC------------cccccCccccccCCCCccCC--CCCCCccchHhHHHHHHHHHhCCCCCCCC
Q 004994 584 VRVSDCGLAPLLFSGST------------NELSEGLLTAHGSGAPEFES--GSYSCQSDVYSLGVVMLELLTGRKPYDRS 649 (720)
Q Consensus 584 ~kl~DFGla~~~~~~~~------------~~~~~~~~~~~~~~aPE~~~--~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~ 649 (720)
+||+|||+++....... ........++..|+|||... +.++.++|||||||++|||++ ||...
T Consensus 155 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~ 231 (303)
T 1zy4_A 155 VKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTG 231 (303)
T ss_dssp EEECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSH
T ss_pred EEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCc
Confidence 99999999987642210 11122345788999999984 368999999999999999998 55321
Q ss_pred CCccccchhhhcccccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 650 RPRGEQSLVRWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.. ....... +.. .............+..+.+++.+||+.||++|||++|++++
T Consensus 232 ~~--~~~~~~~----------~~~-~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 284 (303)
T 1zy4_A 232 ME--RVNILKK----------LRS-VSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNS 284 (303)
T ss_dssp HH--HHHHHHH----------HHS-TTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred hh--HHHHHHh----------ccc-cccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCC
Confidence 10 0000000 000 01111112222334568899999999999999999999975
No 234
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=6.2e-38 Score=335.94 Aligned_cols=261 Identities=19% Similarity=0.308 Sum_probs=195.7
Q ss_pred hcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCe-----
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQ----- 512 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~----- 512 (720)
.++|...+.||+|+||.||+|.. .+|+.||||++..........+.+.+|+.++++++||||+++++++...+.
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 102 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 102 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence 35788889999999999999965 579999999997654444556788999999999999999999999977653
Q ss_pred -EEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccC
Q 004994 513 -HLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGL 591 (720)
Q Consensus 513 -~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGl 591 (720)
.++||||+. ++|.+++. ..+++..+..++.++++||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 103 ~~~lv~e~~~-~~l~~~~~------~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~ 172 (353)
T 3coi_A 103 DFYLVMPFMQ-TDLQKIMG------LKFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGL 172 (353)
T ss_dssp CCEEEEECCS-EEGGGTTT------SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECSTTC
T ss_pred eEEEEecccc-CCHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeeccc
Confidence 599999998 58877763 3488999999999999999999997 999999999999999999999999999
Q ss_pred CCCCCCCCCcccccCccccccCCCCccCC--CCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcc-------
Q 004994 592 APLLFSGSTNELSEGLLTAHGSGAPEFES--GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAI------- 662 (720)
Q Consensus 592 a~~~~~~~~~~~~~~~~~~~~~~aPE~~~--~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~------- 662 (720)
++..... .....++..|+|||.+. ..++.++|||||||++|||++|+.||...........+....
T Consensus 173 ~~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~ 247 (353)
T 3coi_A 173 ARHADAE-----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEF 247 (353)
T ss_dssp TTC-------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHH
T ss_pred ccCCCCC-----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHH
Confidence 9865322 22356788999999873 468999999999999999999999997643221110000000
Q ss_pred -cccCchh--hhhhhc----CCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 663 -PRLHDID--ALSRMV----DPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 663 -~~~~~~~--~~~~~~----~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
..+.+.. ...+.+ .+.+. ......+.++.+++.+||+.||++|||++|++++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 306 (353)
T 3coi_A 248 VQKLNDKAAKSYIQSLPQTPRKDFT-QLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 306 (353)
T ss_dssp HTTCSCHHHHHHHHTSCBCSSCCTT-TTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HHHHhhHHHHHHHHhCcCCCCccHH-HhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 0000000 000000 00000 0112334678999999999999999999999875
No 235
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=7e-38 Score=340.87 Aligned_cols=264 Identities=17% Similarity=0.240 Sum_probs=197.0
Q ss_pred hcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccC--------CCceeEEEeEec-
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLR--------HGNIVELIGYCN- 508 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~--------H~niv~l~~~~~- 508 (720)
.++|...+.||+|+||+||+|.. .+++.||||++... ....+.+.+|++++++++ |+||+++++++.
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~ 112 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA---EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKI 112 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC---CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceee
Confidence 46788899999999999999964 57899999999743 334567889999999986 788999999987
Q ss_pred ---cCCeEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCC---
Q 004994 509 ---EHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKL--- 582 (720)
Q Consensus 509 ---~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~--- 582 (720)
+....++||||+. +++.+.+... ....+++..+..++.|+++||+|||+.+ +||||||||+|||++.++
T Consensus 113 ~~~~~~~~~lv~e~~~-~~l~~~~~~~--~~~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~~~~ 187 (397)
T 1wak_A 113 SGVNGTHICMVFEVLG-HHLLKWIIKS--NYQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNEQYI 187 (397)
T ss_dssp EETTEEEEEEEECCCC-CBHHHHHHHT--TTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCHHHH
T ss_pred cCCCCceEEEEEeccC-ccHHHHHHhc--ccCCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccchhh
Confidence 5568999999995 5666655422 2356899999999999999999999853 799999999999999775
Q ss_pred ----------------------------------------------CeEEccccCCCCCCCCCCcccccCccccccCCCC
Q 004994 583 ----------------------------------------------IVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAP 616 (720)
Q Consensus 583 ----------------------------------------------~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aP 616 (720)
.+||+|||+|+..... .....+|..|+||
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~-----~~~~~gt~~y~aP 262 (397)
T 1wak_A 188 RRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH-----FTEDIQTRQYRSL 262 (397)
T ss_dssp HHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC-----SCSCCSCGGGCCH
T ss_pred hhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc-----CccCCCCCcccCC
Confidence 8999999999876432 2234678999999
Q ss_pred ccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccc---hhhh---cccccC---------------chhhhhhh
Q 004994 617 EFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQS---LVRW---AIPRLH---------------DIDALSRM 674 (720)
Q Consensus 617 E~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~---~~~~---~~~~~~---------------~~~~~~~~ 674 (720)
|.+ ...++.++|||||||++|||+||+.||.......... .... ...... .......+
T Consensus 263 E~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 342 (397)
T 1wak_A 263 EVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHI 342 (397)
T ss_dssp HHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSC
T ss_pred hhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccc
Confidence 998 5569999999999999999999999997543322110 0000 000000 00000000
Q ss_pred cCCCCC---------chhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 675 VDPSLD---------GAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 675 ~~~~~~---------~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.+.... .........++.+|+.+||+.||++|||++|+++|
T Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 392 (397)
T 1wak_A 343 TKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRH 392 (397)
T ss_dssp CCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTS
T ss_pred cccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhC
Confidence 000000 01234566789999999999999999999999975
No 236
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=1.1e-37 Score=343.12 Aligned_cols=253 Identities=21% Similarity=0.287 Sum_probs=185.4
Q ss_pred CCCCCCeeccCCCceEEEEEeCCCcEEEEEEecccccccccHHHHHHHHHHHHcc-CCCceeEEEeEeccCCeEEEEEee
Q 004994 441 SFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRL-RHGNIVELIGYCNEHGQHLLVYDY 519 (720)
Q Consensus 441 ~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv~e~ 519 (720)
.|...++||+|+||+||.+...+|+.||||++... ..+.+.+|+++++++ +|||||++++++.+.+..++||||
T Consensus 16 ~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~-----~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~ 90 (434)
T 2rio_A 16 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID-----FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALEL 90 (434)
T ss_dssp CEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG-----GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECC
T ss_pred eeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH-----HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEec
Confidence 34446889999999998877778999999998643 235678899999886 899999999999999999999999
Q ss_pred CCCCCHHHHhhccchhcccc---CHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCC-------------CC
Q 004994 520 GGNCTLHDLLHSDEEAHKKF---SWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEK-------------LI 583 (720)
Q Consensus 520 ~~~gsL~~~l~~~~~~~~~~---~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~-------------~~ 583 (720)
++ |+|.+++.......... .+.....++.|++.||+|||+. +||||||||+|||++.+ +.
T Consensus 91 ~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~ 166 (434)
T 2rio_A 91 CN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLR 166 (434)
T ss_dssp CS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTCCCSCE
T ss_pred CC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccCCCceE
Confidence 96 69999997543222111 2334578999999999999987 99999999999999754 48
Q ss_pred eEEccccCCCCCCCCCCc--ccccCccccccCCCCccCC--------CCCCCccchHhHHHHHHHHHh-CCCCCCCCCCc
Q 004994 584 VRVSDCGLAPLLFSGSTN--ELSEGLLTAHGSGAPEFES--------GSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPR 652 (720)
Q Consensus 584 ~kl~DFGla~~~~~~~~~--~~~~~~~~~~~~~aPE~~~--------~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~ 652 (720)
+||+|||+++.+...... .......++.+|+|||.+. +.++.++|||||||++|||+| |+.||......
T Consensus 167 ~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~ 246 (434)
T 2rio_A 167 ILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSR 246 (434)
T ss_dssp EEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTH
T ss_pred EEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhh
Confidence 999999999877543221 1123456899999999873 458999999999999999999 99999653321
Q ss_pred cccchhhhcccccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 653 GEQSLVRWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 653 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
. ..+..... .. +..........+.++.+++.+||+.||++|||+.||+++
T Consensus 247 ~-~~i~~~~~-~~-----------~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 296 (434)
T 2rio_A 247 E-SNIIRGIF-SL-----------DEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRH 296 (434)
T ss_dssp H-HHHHHTCC-CC-----------CCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred H-HHHhcCCC-Cc-----------ccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHhC
Confidence 1 11111000 00 011111223456788999999999999999999999864
No 237
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=2.1e-37 Score=335.53 Aligned_cols=201 Identities=23% Similarity=0.314 Sum_probs=168.0
Q ss_pred HhcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccC-CC-----ceeEEEeEeccC
Q 004994 438 YTNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLR-HG-----NIVELIGYCNEH 510 (720)
Q Consensus 438 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~-H~-----niv~l~~~~~~~ 510 (720)
+.++|...+.||+|+||+||+|.. .+++.||||++... .....++..|+++++.++ |+ +|+++++++...
T Consensus 52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~ 128 (382)
T 2vx3_A 52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK---KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFR 128 (382)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS---HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEET
T ss_pred eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc---HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccC
Confidence 467888999999999999999965 47899999999743 234466778888888875 55 499999999999
Q ss_pred CeEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEc--CCCCeEEcc
Q 004994 511 GQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLD--EKLIVRVSD 588 (720)
Q Consensus 511 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~--~~~~~kl~D 588 (720)
+..++||||+++ +|.+++.... ...+++..+..++.+++.||.|||.. ..+||||||||+|||++ .++.+||+|
T Consensus 129 ~~~~lv~e~~~~-~L~~~l~~~~--~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~D 204 (382)
T 2vx3_A 129 NHLCLVFEMLSY-NLYDLLRNTN--FRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVD 204 (382)
T ss_dssp TEEEEEEECCCC-BHHHHHHHTT--TSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECC
T ss_pred CceEEEEecCCC-CHHHHHhhcC--cCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEe
Confidence 999999999975 9999986432 24589999999999999999999952 34899999999999994 578899999
Q ss_pred ccCCCCCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCC
Q 004994 589 CGLAPLLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSR 650 (720)
Q Consensus 589 FGla~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~ 650 (720)
||+|+..... .....+++.|+|||.+ ...++.++|||||||++|||+||+.||....
T Consensus 205 FG~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~ 262 (382)
T 2vx3_A 205 FGSSCQLGQR-----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGAN 262 (382)
T ss_dssp CTTCEETTCC-----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred ccCceecccc-----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 9999876332 2235678899999998 4579999999999999999999999997644
No 238
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=1.3e-37 Score=331.02 Aligned_cols=253 Identities=17% Similarity=0.233 Sum_probs=172.4
Q ss_pred HhcCCCCC-CeeccCCCceEEEEEeC-CCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEecc----CC
Q 004994 438 YTNSFSEG-NFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNE----HG 511 (720)
Q Consensus 438 ~~~~~~~~-~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~----~~ 511 (720)
..++|... ++||+|+||+||+|... +|+.||||++... .....+....++.++||||+++++++.. ..
T Consensus 26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~------~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~ 99 (336)
T 3fhr_A 26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS------PKARQEVDHHWQASGGPHIVCILDVYENMHHGKR 99 (336)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEE
T ss_pred ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc------HHHHHHHHHHHHhcCCCChHHHHHHHhhccCCCc
Confidence 34677774 47999999999999664 7999999998642 1222333344667799999999999865 44
Q ss_pred eEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcC---CCCeEEcc
Q 004994 512 QHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDE---KLIVRVSD 588 (720)
Q Consensus 512 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~---~~~~kl~D 588 (720)
..++||||+++|+|.+++... ....+++..+..++.++++||.|||+. +|+||||||+|||++. ++.+||+|
T Consensus 100 ~~~lv~e~~~gg~L~~~l~~~--~~~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~D 174 (336)
T 3fhr_A 100 CLLIIMECMEGGELFSRIQER--GDQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTD 174 (336)
T ss_dssp EEEEEEECCTTEEHHHHHHTC---CCCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECC
T ss_pred eEEEEEeccCCCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEec
Confidence 689999999999999999643 234689999999999999999999997 9999999999999976 45699999
Q ss_pred ccCCCCCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCc
Q 004994 589 CGLAPLLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHD 667 (720)
Q Consensus 589 FGla~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~ 667 (720)
||+++..... ......++..|+|||.+ ...++.++|||||||++|||++|+.||............. ..+..
T Consensus 175 fg~~~~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~---~~~~~ 247 (336)
T 3fhr_A 175 FGFAKETTQN----ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMK---RRIRL 247 (336)
T ss_dssp CTTCEEC--------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------
T ss_pred cccceecccc----ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHH---Hhhhc
Confidence 9999765322 12234578899999998 5568999999999999999999999996543221100000 00000
Q ss_pred hhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 668 IDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 668 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.............+.++.+++.+||+.||++|||++|++++
T Consensus 248 -------~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 288 (336)
T 3fhr_A 248 -------GQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNH 288 (336)
T ss_dssp ----------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred -------cccccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 00000001112234678899999999999999999999975
No 239
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=3e-37 Score=325.36 Aligned_cols=254 Identities=22% Similarity=0.358 Sum_probs=180.3
Q ss_pred hcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEE
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVY 517 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 517 (720)
.++|...+.||+|+||.||+|.. .+|+.||||++..........+.+.++..+++.++||||+++++++.+.+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~ 103 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM 103 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence 35677789999999999999976 47999999999765433334445566666788899999999999999999999999
Q ss_pred eeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCC
Q 004994 518 DYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFS 597 (720)
Q Consensus 518 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~ 597 (720)
||+ ++.+..+.. .....+++..+..++.++++||.|||+.+ +|+||||||+||+++.++.+||+|||+++....
T Consensus 104 e~~-~~~~~~l~~---~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~ 177 (318)
T 2dyl_A 104 ELM-GTCAEKLKK---RMQGPIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGQIKLCDFGISGRLVD 177 (318)
T ss_dssp CCC-SEEHHHHHH---HHTSCCCHHHHHHHHHHHHHHHHHHHHHH--CCCCCCCCGGGEEECTTSCEEECCCTTC-----
T ss_pred ecc-CCcHHHHHH---HhccCCCHHHHHHHHHHHHHHHHHHHhhC--CEEeCCCCHHHEEECCCCCEEEEECCCchhccC
Confidence 999 445555443 22356889999999999999999999832 899999999999999999999999999976643
Q ss_pred CCCcccccCccccccCCCCccCC------CCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhh
Q 004994 598 GSTNELSEGLLTAHGSGAPEFES------GSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDAL 671 (720)
Q Consensus 598 ~~~~~~~~~~~~~~~~~aPE~~~------~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (720)
.. ......++..|+|||.+. ..++.++|||||||++|||++|+.||........ .... .
T Consensus 178 ~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~--~~~~----------~ 242 (318)
T 2dyl_A 178 DK---AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFE--VLTK----------V 242 (318)
T ss_dssp ------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHH--HHHH----------H
T ss_pred Cc---cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHH--HHHH----------H
Confidence 22 122346788999999873 3588999999999999999999999975322110 0000 0
Q ss_pred hhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 672 SRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 672 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.....+.... ....+.++.+++.+||+.||.+|||++|++++
T Consensus 243 ~~~~~~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (318)
T 2dyl_A 243 LQEEPPLLPG--HMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEH 284 (318)
T ss_dssp HHSCCCCCCS--SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred hccCCCCCCc--cCCCCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 0000011110 01123568899999999999999999999864
No 240
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.2e-37 Score=327.69 Aligned_cols=247 Identities=19% Similarity=0.331 Sum_probs=187.8
Q ss_pred HHHHHhcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEeccccccc----ccHHHHHHHHHHHHcc----CCCceeEEE
Q 004994 434 SLQQYTNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQR----QTDEEFLELASTISRL----RHGNIVELI 504 (720)
Q Consensus 434 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~----~~~~~~~~e~~~l~~l----~H~niv~l~ 504 (720)
+...+.++|...+.||+|+||.||+|.. .+++.||||++....... .....+.+|+++++++ +||||++++
T Consensus 25 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~ 104 (312)
T 2iwi_A 25 DREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLL 104 (312)
T ss_dssp --------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEE
T ss_pred chhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEE
Confidence 3445678899999999999999999965 578999999996543211 1223456788888888 899999999
Q ss_pred eEeccCCeEEEEEee-CCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEc-CCC
Q 004994 505 GYCNEHGQHLLVYDY-GGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLD-EKL 582 (720)
Q Consensus 505 ~~~~~~~~~~lv~e~-~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~-~~~ 582 (720)
+++.+.+..++|||| +.+++|.+++.. ...+++..+..++.++++||+|||+. +|+||||||+||+++ .++
T Consensus 105 ~~~~~~~~~~~v~e~~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~ 177 (312)
T 2iwi_A 105 DWFETQEGFMLVLERPLPAQDLFDYITE----KGPLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILIDLRRG 177 (312)
T ss_dssp EEC-----CEEEEECCSSEEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEETTTT
T ss_pred EEEecCCeEEEEEEecCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEeCCCC
Confidence 999999999999999 789999999853 34689999999999999999999998 999999999999999 889
Q ss_pred CeEEccccCCCCCCCCCCcccccCccccccCCCCccC-CCCC-CCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhh
Q 004994 583 IVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE-SGSY-SCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRW 660 (720)
Q Consensus 583 ~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~-~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~ 660 (720)
.+||+|||+++...... .....++..|+|||.. ...+ +.++|||||||++|||++|+.||.... ....
T Consensus 178 ~~kl~dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-----~~~~- 247 (312)
T 2iwi_A 178 CAKLIDFGSGALLHDEP----YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ-----EILE- 247 (312)
T ss_dssp EEEECCCSSCEECCSSC----BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-----HHHH-
T ss_pred eEEEEEcchhhhcccCc----ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH-----HHhh-
Confidence 99999999998764322 2235578899999987 3344 558999999999999999999996421 0000
Q ss_pred cccccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 661 AIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
. .... +...+.++.+++.+||+.||++|||++|++++
T Consensus 248 ------------~--~~~~----~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 284 (312)
T 2iwi_A 248 ------------A--ELHF----PAHVSPDCCALIRRCLAPKPSSRPSLEEILLD 284 (312)
T ss_dssp ------------T--CCCC----CTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred ------------h--ccCC----cccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0 0000 11123567899999999999999999999975
No 241
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=1.1e-37 Score=329.25 Aligned_cols=245 Identities=17% Similarity=0.324 Sum_probs=196.0
Q ss_pred HHHhcCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEeccccccc----ccHHHHHHHHHHHHccC--CCceeEEEeEec
Q 004994 436 QQYTNSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQR----QTDEEFLELASTISRLR--HGNIVELIGYCN 508 (720)
Q Consensus 436 ~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~----~~~~~~~~e~~~l~~l~--H~niv~l~~~~~ 508 (720)
....++|...+.||+|+||.||+|.. .+++.||||++....... ...+.+.+|++++++++ |+||+++++++.
T Consensus 39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~ 118 (320)
T 3a99_A 39 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFE 118 (320)
T ss_dssp -CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEE
T ss_pred CCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEe
Confidence 34567888999999999999999964 678999999997543221 12245678899999996 599999999999
Q ss_pred cCCeEEEEEeeCCC-CCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEc-CCCCeEE
Q 004994 509 EHGQHLLVYDYGGN-CTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLD-EKLIVRV 586 (720)
Q Consensus 509 ~~~~~~lv~e~~~~-gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~-~~~~~kl 586 (720)
+.+..++||||+.+ ++|.+++.. ...+++..+..++.++++||+|||+. +|+||||||+|||++ +++.+||
T Consensus 119 ~~~~~~lv~e~~~~~~~L~~~l~~----~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~kL 191 (320)
T 3a99_A 119 RPDSFVLILERPEPVQDLFDFITE----RGALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKL 191 (320)
T ss_dssp CSSEEEEEEECCSSEEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEE
T ss_pred cCCcEEEEEEcCCCCccHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCCCCCEEE
Confidence 99999999999976 899999853 35688999999999999999999997 999999999999999 7899999
Q ss_pred ccccCCCCCCCCCCcccccCccccccCCCCccC-CCC-CCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccc
Q 004994 587 SDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE-SGS-YSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPR 664 (720)
Q Consensus 587 ~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~-~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~ 664 (720)
+|||+++...... .....++..|+|||.. ... ++.++|||||||++|||+||+.||.... ..... .
T Consensus 192 ~Dfg~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~-----~~~~~---~ 259 (320)
T 3a99_A 192 IDFGSGALLKDTV----YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-----EIIRG---Q 259 (320)
T ss_dssp CCCTTCEECCSSC----BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-----HHHHC---C
T ss_pred eeCcccccccccc----ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh-----hhhcc---c
Confidence 9999998764321 2235678899999987 334 4788999999999999999999996421 00000 0
Q ss_pred cCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 665 LHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 665 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
. ... ...+.++.+++.+||+.||++|||++|++++
T Consensus 260 ~--------~~~--------~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 294 (320)
T 3a99_A 260 V--------FFR--------QRVSSECQHLIRWCLALRPSDRPTFEEIQNH 294 (320)
T ss_dssp C--------CCS--------SCCCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred c--------ccc--------ccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0 001 1123568899999999999999999999874
No 242
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=3.9e-37 Score=329.56 Aligned_cols=263 Identities=17% Similarity=0.280 Sum_probs=196.4
Q ss_pred hcCCCCCCeeccCCCceEEEEEe-CCC-cEEEEEEecccccccccHHHHHHHHHHHHccCCCc------eeEEEeEeccC
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAEL-PGG-KLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGN------IVELIGYCNEH 510 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g-~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~n------iv~l~~~~~~~ 510 (720)
.++|...+.||+|+||+||+|.. .++ +.||||+++.. ....+.+.+|++++++++|++ ++.+++++...
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 94 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV---GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFH 94 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEET
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc---ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeC
Confidence 46788899999999999999965 344 78999999743 234567888999999998766 99999999999
Q ss_pred CeEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEE------------
Q 004994 511 GQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILL------------ 578 (720)
Q Consensus 511 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl------------ 578 (720)
+..++||||+ ++++.+.+... ....+++..+..++.|+++||+|||+. +|+||||||+|||+
T Consensus 95 ~~~~lv~e~~-~~~l~~~l~~~--~~~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~ 168 (355)
T 2eu9_A 95 GHMCIAFELL-GKNTFEFLKEN--NFQPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEH 168 (355)
T ss_dssp TEEEEEEECC-CCBHHHHHHHT--TTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEEEECCC
T ss_pred CeEEEEEecc-CCChHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeccccccccccc
Confidence 9999999999 55676666432 224689999999999999999999987 99999999999999
Q ss_pred -------cCCCCeEEccccCCCCCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCC
Q 004994 579 -------DEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSR 650 (720)
Q Consensus 579 -------~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~ 650 (720)
+.++.+||+|||+++..... .....++..|+|||.+ ...++.++|||||||++|||+||+.||....
T Consensus 169 ~~~~~~~~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~ 243 (355)
T 2eu9_A 169 KSCEEKSVKNTSIRVADFGSATFDHEH-----HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHE 243 (355)
T ss_dssp -CCCEEEESCCCEEECCCTTCEETTSC-----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred ccccccccCCCcEEEeecCcccccccc-----ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCC
Confidence 67889999999999865332 2235688999999998 5579999999999999999999999997643
Q ss_pred CccccchhhhcccccCch-------------------------hhhhhhcCCCCC-chhhHHHHHHHHHHHHHHhccCCC
Q 004994 651 PRGEQSLVRWAIPRLHDI-------------------------DALSRMVDPSLD-GAYLAKSLSRFADIISRCVQWEPG 704 (720)
Q Consensus 651 ~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~-~~~~~~~~~~l~~l~~~cl~~dP~ 704 (720)
.......+.......... ........+... .........++.+|+.+||+.||+
T Consensus 244 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~ 323 (355)
T 2eu9_A 244 NREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPA 323 (355)
T ss_dssp HHHHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTT
T ss_pred HHHHHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChh
Confidence 222111111100000000 000000000000 001123456789999999999999
Q ss_pred CCCCHHHHHHH
Q 004994 705 FRPPMSEIVQD 715 (720)
Q Consensus 705 ~RPt~~evl~~ 715 (720)
+|||++|++++
T Consensus 324 ~Rpt~~e~l~h 334 (355)
T 2eu9_A 324 QRITLAEALLH 334 (355)
T ss_dssp TSCCHHHHTTS
T ss_pred hCcCHHHHhcC
Confidence 99999999864
No 243
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=2e-36 Score=313.97 Aligned_cols=231 Identities=14% Similarity=0.075 Sum_probs=183.0
Q ss_pred hcCCCCCCeeccCCCceEEEEEeC-CCcEEEEEEecccccc-cccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEE
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVSQ-RQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLV 516 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 516 (720)
.++|...+.||+|+||.||+|... +|+.||||++...... ....+.|.+|++++++++||||+++++++.+.+..|+|
T Consensus 30 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 109 (286)
T 3uqc_A 30 NGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVV 109 (286)
T ss_dssp TTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred cCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEE
Confidence 356888899999999999999664 5999999999765332 33447899999999999999999999999999999999
Q ss_pred EeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCC
Q 004994 517 YDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLF 596 (720)
Q Consensus 517 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~ 596 (720)
|||+++++|.+++... .......+++.|+++||+|||+. +|+||||||+|||++.++.+||+++|.
T Consensus 110 ~e~~~g~~L~~~l~~~------~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~~~----- 175 (286)
T 3uqc_A 110 AEWIRGGSLQEVADTS------PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYPAT----- 175 (286)
T ss_dssp EECCCEEEHHHHHTTC------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSCCC-----
T ss_pred EEecCCCCHHHHHhcC------CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEeccc-----
Confidence 9999999999998431 24456788999999999999997 999999999999999999999985542
Q ss_pred CCCCcccccCccccccCCCCccCCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccc-hhhhcccccCchhhhhhhc
Q 004994 597 SGSTNELSEGLLTAHGSGAPEFESGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQS-LVRWAIPRLHDIDALSRMV 675 (720)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 675 (720)
++ .++.++|||||||++|||+||+.||.......... ............
T Consensus 176 -----------------~~------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~------- 225 (286)
T 3uqc_A 176 -----------------MP------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIEP------- 225 (286)
T ss_dssp -----------------CT------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBCTTSCBCCH-------
T ss_pred -----------------cC------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHHhccCCCCh-------
Confidence 22 36889999999999999999999998654322110 000000000000
Q ss_pred CCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 004994 676 DPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCM 719 (720)
Q Consensus 676 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~ 719 (720)
.......+.++.+++.+||+.||++| |++|+++.|+++
T Consensus 226 -----~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~ 263 (286)
T 3uqc_A 226 -----ADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQA 263 (286)
T ss_dssp -----HHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHH
T ss_pred -----hhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHH
Confidence 01112234678899999999999999 999999999874
No 244
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=3.3e-37 Score=338.39 Aligned_cols=249 Identities=20% Similarity=0.272 Sum_probs=183.9
Q ss_pred cCCCCCCeeccCCCceEEEEEeCCCcEEEEEEecccccccccHHHHHHHHHHHHcc-CCCceeEEEeEeccCCeEEEEEe
Q 004994 440 NSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRL-RHGNIVELIGYCNEHGQHLLVYD 518 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv~e 518 (720)
.+|...++||+|+||+||.....+|+.||||++...... .+.+|+++++++ +|||||++++++.+.+..++|||
T Consensus 24 ~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~~-----~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E 98 (432)
T 3p23_A 24 ISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFS-----FADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIE 98 (432)
T ss_dssp EEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTEE-----ECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred EEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHHH-----HHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEE
Confidence 457778999999999977666668899999999754321 245789999999 89999999999999999999999
Q ss_pred eCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcC-----CCCeEEccccCCC
Q 004994 519 YGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDE-----KLIVRVSDCGLAP 593 (720)
Q Consensus 519 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~-----~~~~kl~DFGla~ 593 (720)
|++ |+|.+++.... ..+.+.....++.|+++||+|||+. +||||||||+|||++. ...+||+|||+|+
T Consensus 99 ~~~-g~L~~~l~~~~---~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~ 171 (432)
T 3p23_A 99 LCA-ATLQEYVEQKD---FAHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCK 171 (432)
T ss_dssp CCS-EEHHHHHHSSS---CCCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEE
T ss_pred CCC-CCHHHHHHhcC---CCccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEeccccee
Confidence 997 59999986432 2233445678999999999999997 8999999999999943 3368899999998
Q ss_pred CCCCCCCc-ccccCccccccCCCCccCC----CCCCCccchHhHHHHHHHHHh-CCCCCCCCCCccccchhhhcccccCc
Q 004994 594 LLFSGSTN-ELSEGLLTAHGSGAPEFES----GSYSCQSDVYSLGVVMLELLT-GRKPYDRSRPRGEQSLVRWAIPRLHD 667 (720)
Q Consensus 594 ~~~~~~~~-~~~~~~~~~~~~~aPE~~~----~~~~~~~Dv~S~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~ 667 (720)
.+...... .......+|++|+|||.+. ..++.++|||||||++|||+| |+.||............. ...
T Consensus 172 ~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~~~~----~~~- 246 (432)
T 3p23_A 172 KLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLG----ACS- 246 (432)
T ss_dssp CC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHHHTT----CCC-
T ss_pred eccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHHHhc----cCC-
Confidence 76533211 2233456899999999984 357789999999999999999 999995432211100000 000
Q ss_pred hhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 668 IDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 668 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
..... ........+.+++.+||+.||++|||++||++|
T Consensus 247 --------~~~~~--~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~h 284 (432)
T 3p23_A 247 --------LDCLH--PEKHEDVIARELIEKMIAMDPQKRPSAKHVLKH 284 (432)
T ss_dssp --------CTTSC--TTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred --------ccccC--ccccccHHHHHHHHHHHhCCHhhCCCHHHHHhC
Confidence 00000 112234567899999999999999999999854
No 245
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=1.8e-37 Score=334.81 Aligned_cols=263 Identities=17% Similarity=0.294 Sum_probs=193.8
Q ss_pred cCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccC-----------CCceeEEEeEe
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLR-----------HGNIVELIGYC 507 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~-----------H~niv~l~~~~ 507 (720)
++|...+.||+|+||+||+|.. .+++.||||++... ....+.+.+|++++++++ |+||+++++++
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~ 95 (373)
T 1q8y_A 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD---KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHF 95 (373)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEE
T ss_pred CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC---ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHh
Confidence 5788889999999999999965 67999999999743 234567888999998886 89999999998
Q ss_pred ccCC----eEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEc----
Q 004994 508 NEHG----QHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLD---- 579 (720)
Q Consensus 508 ~~~~----~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~---- 579 (720)
...+ ..++||||+ +++|.+++.... ...+++..+..++.|++.||+|||+.+ +|+||||||+|||++
T Consensus 96 ~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~--~~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~~~ 170 (373)
T 1q8y_A 96 NHKGPNGVHVVMVFEVL-GENLLALIKKYE--HRGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVDS 170 (373)
T ss_dssp EEEETTEEEEEEEECCC-CEEHHHHHHHTT--TSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEEET
T ss_pred hccCCCCceEEEEEecC-CCCHHHHHHHhh--ccCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEeccCC
Confidence 7543 789999999 889999986432 345889999999999999999999842 799999999999994
Q ss_pred --CCCCeEEccccCCCCCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCcccc-
Q 004994 580 --EKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQ- 655 (720)
Q Consensus 580 --~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~- 655 (720)
..+.+||+|||+++..... .....++..|+|||.+ ...++.++|||||||++|||+||+.||.........
T Consensus 171 ~~~~~~~kl~Dfg~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~ 245 (373)
T 1q8y_A 171 PENLIQIKIADLGNACWYDEH-----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTK 245 (373)
T ss_dssp TTTEEEEEECCCTTCEETTBC-----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------C
T ss_pred CcCcceEEEcccccccccCCC-----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCC
Confidence 4458999999999876432 2234678999999998 557899999999999999999999999754321100
Q ss_pred ---chhh--hcccccCch-----hhhhhhcCC----------CC---------CchhhHHHHHHHHHHHHHHhccCCCCC
Q 004994 656 ---SLVR--WAIPRLHDI-----DALSRMVDP----------SL---------DGAYLAKSLSRFADIISRCVQWEPGFR 706 (720)
Q Consensus 656 ---~~~~--~~~~~~~~~-----~~~~~~~~~----------~~---------~~~~~~~~~~~l~~l~~~cl~~dP~~R 706 (720)
.+.. .....+... .....++.. .. ....+...+.++.+|+.+||+.||++|
T Consensus 246 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R 325 (373)
T 1q8y_A 246 DDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKR 325 (373)
T ss_dssp HHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTC
T ss_pred hHHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCcccc
Confidence 0000 000000000 000000000 00 001234567789999999999999999
Q ss_pred CCHHHHHHH
Q 004994 707 PPMSEIVQD 715 (720)
Q Consensus 707 Pt~~evl~~ 715 (720)
||++|++++
T Consensus 326 pt~~ell~h 334 (373)
T 1q8y_A 326 ADAGGLVNH 334 (373)
T ss_dssp BCHHHHHTC
T ss_pred CCHHHHhhC
Confidence 999999874
No 246
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=2e-36 Score=342.58 Aligned_cols=260 Identities=20% Similarity=0.256 Sum_probs=195.3
Q ss_pred cCCCCCCeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEecc------CCe
Q 004994 440 NSFSEGNFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNE------HGQ 512 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~------~~~ 512 (720)
++|...+.||+|+||.||+|.. .+|+.||||++.... .....+.+.+|++++++++||||+++++++.. .+.
T Consensus 14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~-~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~ 92 (676)
T 3qa8_A 14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQEL-SPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL 92 (676)
T ss_dssp ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCC-CHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccC-CHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence 6799999999999999999965 568999999987543 23455779999999999999999999999865 667
Q ss_pred EEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCC---eEEccc
Q 004994 513 HLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLI---VRVSDC 589 (720)
Q Consensus 513 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~---~kl~DF 589 (720)
.++||||+++|+|.+++.... ....+++..+..++.+++.||+|||+. +|+||||||+||+++.++. +||+||
T Consensus 93 ~~LVmEy~~ggsL~~~L~~~~-~~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL~DF 168 (676)
T 3qa8_A 93 PLLAMEYCEGGDLRKYLNQFE-NCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDL 168 (676)
T ss_dssp CCCEEECCSSCBHHHHHHSSS-CTTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEECSC
T ss_pred EEEEEEeCCCCCHHHHHHhcc-cCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEEccc
Confidence 899999999999999997532 223588889999999999999999997 9999999999999997765 999999
Q ss_pred cCCCCCCCCCCcccccCccccccCCCCccC-CCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhccccc---
Q 004994 590 GLAPLLFSGSTNELSEGLLTAHGSGAPEFE-SGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRL--- 665 (720)
Q Consensus 590 Gla~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~--- 665 (720)
|+++...... ......++.+|+|||.+ .+.++.++|||||||++|||+||+.||...... ..|.....
T Consensus 169 G~a~~~~~~~---~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~-----~~~~~~i~~~~ 240 (676)
T 3qa8_A 169 GYAKELDQGE---LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQP-----VQWHGKVREKS 240 (676)
T ss_dssp CCCCBTTSCC---CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHH-----HHSSTTCC---
T ss_pred cccccccccc---ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccch-----hhhhhhhhccc
Confidence 9998764432 22345788999999998 567999999999999999999999999653211 01100000
Q ss_pred ----Cchhhhhhh--cCCC--CCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHH
Q 004994 666 ----HDIDALSRM--VDPS--LDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEI 712 (720)
Q Consensus 666 ----~~~~~~~~~--~~~~--~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev 712 (720)
...+..... .... .........+..+.+++.+||+.||++|||++|+
T Consensus 241 ~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~el 295 (676)
T 3qa8_A 241 NEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQN 295 (676)
T ss_dssp ---CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTC
T ss_pred chhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHH
Confidence 000000000 0000 0111233456788999999999999999999884
No 247
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=6.4e-36 Score=312.58 Aligned_cols=231 Identities=19% Similarity=0.274 Sum_probs=177.1
Q ss_pred cCCCCC-CeeccCCCceEEEEEe-CCCcEEEEEEecccccccccHHHHHHHHHHH-HccCCCceeEEEeEecc----CCe
Q 004994 440 NSFSEG-NFIGEGLLGSVYKAEL-PGGKLLAVKKLSNTVSQRQTDEEFLELASTI-SRLRHGNIVELIGYCNE----HGQ 512 (720)
Q Consensus 440 ~~~~~~-~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l-~~l~H~niv~l~~~~~~----~~~ 512 (720)
++|... ++||+|+||.||+|.. .+++.||||++... ..+.+|++++ +..+||||+++++++.. ...
T Consensus 17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-------~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 89 (299)
T 3m2w_A 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-------PKARREVELHWRASQCPHIVRIVDVYENLYAGRKC 89 (299)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEE
T ss_pred cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc-------HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCce
Confidence 456555 7899999999999965 57899999998532 3567788887 66699999999999876 667
Q ss_pred EEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcC---CCCeEEccc
Q 004994 513 HLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDE---KLIVRVSDC 589 (720)
Q Consensus 513 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~---~~~~kl~DF 589 (720)
.++||||+++|+|.+++... ....+++..+..++.+++.||+|||+. +|+||||||+|||++. ++.+||+||
T Consensus 90 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~Df 164 (299)
T 3m2w_A 90 LLIVMECLDGGELFSRIQDR--GDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDF 164 (299)
T ss_dssp EEEEECCCCSCBHHHHHHHC--TTCCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCC
T ss_pred EEEEEeecCCCcHHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEecc
Confidence 89999999999999999642 234689999999999999999999997 9999999999999998 789999999
Q ss_pred cCCCCCCCCCCcccccCccccccCCCCccCCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchh
Q 004994 590 GLAPLLFSGSTNELSEGLLTAHGSGAPEFESGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDID 669 (720)
Q Consensus 590 Gla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 669 (720)
|++.... ...++.++|||||||++|||+||+.||............. ..+..
T Consensus 165 g~a~~~~-----------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~---~~~~~-- 216 (299)
T 3m2w_A 165 GFAKETT-----------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMK---TRIRM-- 216 (299)
T ss_dssp TTCEECT-----------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSC---CSSCT--
T ss_pred ccccccc-----------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHH---HHHhh--
Confidence 9986442 1346789999999999999999999996543221100000 00000
Q ss_pred hhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 670 ALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 670 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
.............+.++.+++.+||+.||++|||++|++++
T Consensus 217 -----~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 257 (299)
T 3m2w_A 217 -----GQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 257 (299)
T ss_dssp -----TCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred -----ccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 00011111112234678999999999999999999999975
No 248
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=3.1e-36 Score=350.25 Aligned_cols=239 Identities=20% Similarity=0.292 Sum_probs=191.6
Q ss_pred hcCCCCCCeeccCCCceEEEEEeC--CCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeEeccCCe----
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAELP--GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQ---- 512 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~~--~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~---- 512 (720)
.++|...+.||+|+||+||+|... +|+.||||++.... .....+.+.+|++++++++|||||++++++.+.+.
T Consensus 79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 157 (681)
T 2pzi_A 79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSG-DAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDP 157 (681)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSC-CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCE
T ss_pred CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccC-CHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCc
Confidence 467888999999999999999764 68999999986532 23445678999999999999999999999976554
Q ss_pred -EEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccC
Q 004994 513 -HLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGL 591 (720)
Q Consensus 513 -~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGl 591 (720)
.|+||||+++++|.+++. ..+++..+..++.++++||.|||+. +||||||||+|||++.+ .+||+|||+
T Consensus 158 ~~~lv~E~~~g~~L~~~~~------~~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DFG~ 227 (681)
T 2pzi_A 158 VGYIVMEYVGGQSLKRSKG------QKLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLGA 227 (681)
T ss_dssp EEEEEEECCCCEECC----------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCCTT
T ss_pred eeEEEEEeCCCCcHHHHHh------CCCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEeccc
Confidence 799999999999988763 2689999999999999999999997 89999999999999986 899999999
Q ss_pred CCCCCCCCCcccccCccccccCCCCccCCCCCCCccchHhHHHHHHHHHhCCCCCCCCCCccccchhhhcccccCchhhh
Q 004994 592 APLLFSGSTNELSEGLLTAHGSGAPEFESGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDAL 671 (720)
Q Consensus 592 a~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~Dv~S~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (720)
++..... ....+|++|+|||.+.+.++.++|||||||++|||++|..||...... .+..
T Consensus 228 a~~~~~~------~~~~gt~~y~aPE~~~~~~~~~sDi~slG~~l~~l~~g~~~~~~~~~~-----------~~~~---- 286 (681)
T 2pzi_A 228 VSRINSF------GYLYGTPGFQAPEIVRTGPTVATDIYTVGRTLAALTLDLPTRNGRYVD-----------GLPE---- 286 (681)
T ss_dssp CEETTCC------SCCCCCTTTSCTTHHHHCSCHHHHHHHHHHHHHHHHSCCCEETTEECS-----------SCCT----
T ss_pred chhcccC------CccCCCccccCHHHHcCCCCCceehhhhHHHHHHHHhCCCCCcccccc-----------cccc----
Confidence 9876432 335689999999998666789999999999999999999888532100 0000
Q ss_pred hhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCC-HHHHHHHHHh
Q 004994 672 SRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPP-MSEIVQDLLC 718 (720)
Q Consensus 672 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt-~~evl~~L~~ 718 (720)
..........+.+++.+||+.||++||+ ++++.+.|..
T Consensus 287 ---------~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~ 325 (681)
T 2pzi_A 287 ---------DDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTG 325 (681)
T ss_dssp ---------TCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred ---------cccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHH
Confidence 0011123457889999999999999995 6666666654
No 249
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=1.1e-35 Score=324.80 Aligned_cols=244 Identities=14% Similarity=0.150 Sum_probs=176.4
Q ss_pred cCCCCCCeeccCCCceEEEEE-eCCCcEEEEEEecccc-cccccHHHHHHHHHHHHccCC-Ccee---------------
Q 004994 440 NSFSEGNFIGEGLLGSVYKAE-LPGGKLLAVKKLSNTV-SQRQTDEEFLELASTISRLRH-GNIV--------------- 501 (720)
Q Consensus 440 ~~~~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~-~~~~~~~~~~~e~~~l~~l~H-~niv--------------- 501 (720)
..|...++||+|+||+||+|. ..+|+.||||++.... ......+.|.+|+.+++.++| +|..
T Consensus 78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 157 (413)
T 3dzo_A 78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV 157 (413)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEE
T ss_pred eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhc
Confidence 346667899999999999996 5679999999987322 222345779999999999987 3211
Q ss_pred E------EEeEecc-----CCeEEEEEeeCCCCCHHHHhhcc---chhccccCHHHHHHHHHHHHHHHHHHHhcCCCCee
Q 004994 502 E------LIGYCNE-----HGQHLLVYDYGGNCTLHDLLHSD---EEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIV 567 (720)
Q Consensus 502 ~------l~~~~~~-----~~~~~lv~e~~~~gsL~~~l~~~---~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~iv 567 (720)
. +..++.. ....+++|++ .+++|.+++... ......+++..+..++.|+++||+|||+. +||
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ii 233 (413)
T 3dzo_A 158 KDPQKKKMIRVRLDERDMWVLSRFFLYPR-MQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GLV 233 (413)
T ss_dssp ECCC---------------CCSEEEEEEC-CSEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEE
T ss_pred ccCCCCccccccCCCccccccceEEEeeh-hcCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---Ccc
Confidence 1 1111111 1235566665 457999888422 12245678889999999999999999987 999
Q ss_pred ecCCCCCCeEEcCCCCeEEccccCCCCCCCCCCcccccCccccccCCCCccC----------CC-CCCCccchHhHHHHH
Q 004994 568 HGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFE----------SG-SYSCQSDVYSLGVVM 636 (720)
Q Consensus 568 HrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~----------~~-~~~~~~Dv~S~Gvvl 636 (720)
||||||+|||++.++.+||+|||+++..... .....+ ..|+|||.+ .+ .++.++|||||||++
T Consensus 234 HrDiKp~NILl~~~~~~kL~DFG~a~~~~~~-----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil 307 (413)
T 3dzo_A 234 HTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS-----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAI 307 (413)
T ss_dssp CSCCCGGGEEECTTCCEEECCGGGCEETTEE-----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHH
T ss_pred cCCcccceEEEecCCeEEEEeccceeecCCc-----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHH
Confidence 9999999999999999999999999765322 233456 899999987 22 378899999999999
Q ss_pred HHHHhCCCCCCCCCCccccchhhhcccccCchhhhhhhcCCCCCchhhHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 004994 637 LELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQD 715 (720)
Q Consensus 637 ~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 715 (720)
|||+||+.||.......... .++... ...++++.+++.+||+.||++|||+.|++++
T Consensus 308 ~elltg~~Pf~~~~~~~~~~----------------~~~~~~------~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~~ 364 (413)
T 3dzo_A 308 YWIWCADLPNTDDAALGGSE----------------WIFRSC------KNIPQPVRALLEGFLRYPKEDRLLPLQAMET 364 (413)
T ss_dssp HHHHHSSCCCCTTGGGSCSG----------------GGGSSC------CCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred HHHHHCCCCCCCcchhhhHH----------------HHHhhc------ccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 99999999997543211110 011100 0112568899999999999999999888653
No 250
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=2.4e-35 Score=313.52 Aligned_cols=245 Identities=17% Similarity=0.187 Sum_probs=186.1
Q ss_pred hcCCCCCCeeccCCCceEEEEEeCCCcEEEEEEeccccc------ccccHHHHHHHHHHHHccC---------CCceeEE
Q 004994 439 TNSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVS------QRQTDEEFLELASTISRLR---------HGNIVEL 503 (720)
Q Consensus 439 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~------~~~~~~~~~~e~~~l~~l~---------H~niv~l 503 (720)
.++|...+.||+|+||+||+|.. +|+.||||++..... .....+.+.+|++++++++ |||||++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 35677889999999999999977 789999999975432 2334478899999998886 7777777
Q ss_pred EeEe-----------------cc-------------CCeEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHH
Q 004994 504 IGYC-----------------NE-------------HGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAAR 553 (720)
Q Consensus 504 ~~~~-----------------~~-------------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~ 553 (720)
.+++ .+ .+..++||||+++|++.+.+.. ..+++.....++.|++.
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~-----~~~~~~~~~~i~~qi~~ 172 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT-----KLSSLATAKSILHQLTA 172 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT-----TCCCHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh-----cCCCHHHHHHHHHHHHH
Confidence 6653 22 6789999999999976666532 45789999999999999
Q ss_pred HHHHHH-hcCCCCeeecCCCCCCeEEcCCC--------------------CeEEccccCCCCCCCCCCcccccCcccccc
Q 004994 554 ALQYLQ-EVCEPPIVHGNFKSSNILLDEKL--------------------IVRVSDCGLAPLLFSGSTNELSEGLLTAHG 612 (720)
Q Consensus 554 ~L~~LH-~~~~~~ivHrDlkp~NiLl~~~~--------------------~~kl~DFGla~~~~~~~~~~~~~~~~~~~~ 612 (720)
||+||| +. +||||||||+|||++.++ .+||+|||+|+..... ...+|..
T Consensus 173 aL~~lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-------~~~gt~~ 242 (336)
T 2vuw_A 173 SLAVAEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-------IVVFCDV 242 (336)
T ss_dssp HHHHHHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-------EEECCCC
T ss_pred HHHHHHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-------cEEEeec
Confidence 999999 77 899999999999999887 8999999999876422 2468899
Q ss_pred CCCCccCCCCCCCccchHhHHHH-HHHHHhCCCCCCCCCCccccchhhhcccccCchhhhhh-hcCCCCCchhhHHHHHH
Q 004994 613 SGAPEFESGSYSCQSDVYSLGVV-MLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSR-MVDPSLDGAYLAKSLSR 690 (720)
Q Consensus 613 ~~aPE~~~~~~~~~~Dv~S~Gvv-l~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 690 (720)
|+|||.+.+..+.++||||+|++ .+++++|..||...... ..... ..... ..............+++
T Consensus 243 y~aPE~~~g~~~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~--~~~~~---------~~~~~~~~~~~~~~~~~~~~s~~ 311 (336)
T 2vuw_A 243 SMDEDLFTGDGDYQFDIYRLMKKENNNRWGEYHPYSNVLWL--HYLTD---------KMLKQMTFKTKCNTPAMKQIKRK 311 (336)
T ss_dssp TTCSGGGCCCSSHHHHHHHHHHHHHTTCTTSCCTHHHHHHH--HHHHH---------HHHHTCCCSSCCCSHHHHHHHHH
T ss_pred ccChhhhcCCCccceehhhhhCCCCcccccccCCCcchhhh--hHHHH---------hhhhhhccCcccchhhhhhcCHH
Confidence 99999997777999999998777 78889999998421000 00000 00000 01111122334567788
Q ss_pred HHHHHHHHhccCCCCCCCHHHHH-HH
Q 004994 691 FADIISRCVQWEPGFRPPMSEIV-QD 715 (720)
Q Consensus 691 l~~l~~~cl~~dP~~RPt~~evl-~~ 715 (720)
+.+|+.+||+.| |++|++ +|
T Consensus 312 ~~dli~~~L~~d-----sa~e~l~~H 332 (336)
T 2vuw_A 312 IQEFHRTMLNFS-----SATDLLCQH 332 (336)
T ss_dssp HHHHHHHGGGSS-----SHHHHHHHC
T ss_pred HHHHHHHHhccC-----CHHHHHhcC
Confidence 999999999976 999998 64
No 251
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.97 E-value=9.7e-32 Score=282.54 Aligned_cols=220 Identities=25% Similarity=0.487 Sum_probs=201.0
Q ss_pred CCCHHHHHHHHHHHHhcCCC-CCCCccCCCCCCCCCCCceeEeec----CceeEEEecCCcccc--cCCcCcCCCCCccE
Q 004994 27 VTDPRDVMALNSLYISLNFP-PLEKWLSFGGDPCGDSWQGVFCVF----SNVTEIRLTGMNLGG--VLADTLGDLESVIN 99 (720)
Q Consensus 27 ~~~~~~~~al~~~~~~l~~~-~~~~w~~~~~~~c~~~w~gv~c~~----~~l~~l~L~~n~l~~--~~~~~~~~l~~L~~ 99 (720)
.|.++|+.||++||+++++| .+.+|.. +.|||.+.|.||.|.. .+|+.|+|++|+++| .+|+.|+.+++|++
T Consensus 2 ~c~~~~~~aL~~~k~~~~~~~~l~~W~~-~~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~ 80 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLGNPTTLSSWLP-TTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNF 80 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTCCGGGTTCCT-TSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTCSE
T ss_pred CCCHHHHHHHHHHHHhcCCcccccCCCC-CCCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCCCCCe
Confidence 58999999999999999887 5789965 6788855699999975 689999999999999 89999999999999
Q ss_pred EeccC-CcccccCCCCcc--ccCcEEEecCCcCCCCCcchhhcccccccccccccccCCCCCchhcCCCCCceEeccCCc
Q 004994 100 IDLSN-NHIGGSIPSNLP--VTVRNFSLSGNQLTGSIPESLSRLTQLLDLSLNNNHLNGGIPDAFHQFTGLINFDLSANN 176 (720)
Q Consensus 100 L~L~~-N~l~g~ip~~~~--~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~ 176 (720)
|+|++ |++.+.+|..+. .+|++|+|++|++++.+|..|.++++|++|+|++|++++.+|..|.++++|++|+|++|+
T Consensus 81 L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 160 (313)
T 1ogq_A 81 LYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNR 160 (313)
T ss_dssp EEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSC
T ss_pred eeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCCc
Confidence 99995 999999999887 799999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCC-CCceeeccccccccccc-cccccccceEEccCCcCcccCCcccCCCccccccCccCCCc
Q 004994 177 LTGQLPPSTRNLS-SLYSLHLQNNKLSGTLN-VLEDLHLIDLNIENNLFSGPIPEKLLSIPNFRKDGNPFNTT 247 (720)
Q Consensus 177 l~g~~p~~~~~l~-~L~~L~l~~N~l~~~~~-~~~~~~l~~l~l~~N~l~g~~p~~~~~l~~l~~~~n~~~~~ 247 (720)
++|.+|..+..++ +|+.|+|++|++++.++ .+..+.|+.|++++|.+++.+|..+..+++|+..+...|..
T Consensus 161 l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l 233 (313)
T 1ogq_A 161 ISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSL 233 (313)
T ss_dssp CEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEE
T ss_pred ccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCcccEEECcCCcccCcCCHHHhcCCCCCEEECCCCce
Confidence 9999999999998 99999999999997664 56777799999999999999999988888877666655544
No 252
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.95 E-value=1.3e-29 Score=286.53 Aligned_cols=187 Identities=13% Similarity=0.054 Sum_probs=130.6
Q ss_pred eccCCCceEEEE-EeCCCcEEEEEEeccccc--------ccccHHHHHHHHHHHHcc-CCCceeEEEeEeccCCeEEEEE
Q 004994 448 IGEGLLGSVYKA-ELPGGKLLAVKKLSNTVS--------QRQTDEEFLELASTISRL-RHGNIVELIGYCNEHGQHLLVY 517 (720)
Q Consensus 448 lg~G~~g~Vy~~-~~~~g~~vavK~l~~~~~--------~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv~ 517 (720)
.+.|+.|.++.+ +...|+.||||++.+... .....++|.+|+++|+++ .|+||++++++++++++.||||
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM 321 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM 321 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence 456666666665 344688999999975421 112346799999999999 7999999999999999999999
Q ss_pred eeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCC
Q 004994 518 DYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFS 597 (720)
Q Consensus 518 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~ 597 (720)
||++|++|.+++... ..++.. +|+.||+.||+|+|+. +||||||||+|||+++++++||+|||+|+....
T Consensus 322 Eyv~G~~L~d~i~~~----~~l~~~---~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~ 391 (569)
T 4azs_A 322 EKLPGRLLSDMLAAG----EEIDRE---KILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQ 391 (569)
T ss_dssp ECCCSEEHHHHHHTT----CCCCHH---HHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCCTTEESCC-
T ss_pred ecCCCCcHHHHHHhC----CCCCHH---HHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeecccCeeCCC
Confidence 999999999999643 345443 5899999999999998 999999999999999999999999999987643
Q ss_pred CCCcccccCccccccCCCCccCCCCCCCccchHhHHHHHHHHHhCCCCC
Q 004994 598 GSTNELSEGLLTAHGSGAPEFESGSYSCQSDVYSLGVVMLELLTGRKPY 646 (720)
Q Consensus 598 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~Dv~S~Gvvl~elltG~~Pf 646 (720)
... ......||++|+|||.+.+.+..++|+||+|++++++.++..|+
T Consensus 392 ~~~--~~~t~vGTp~YmAPE~l~g~~~~~~d~~s~g~~~~~l~~~~~~~ 438 (569)
T 4azs_A 392 DCS--WPTNLVQSFFVFVNELFAENKSWNGFWRSAPVHPFNLPQPWSNW 438 (569)
T ss_dssp --C--CSHHHHHHHHHHHHHHC-----------------CCCCTTHHHH
T ss_pred CCc--cccCceechhhccHHHhCCCCCCcccccccccchhhhccccchh
Confidence 322 23346789999999999888899999999999998877665443
No 253
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.94 E-value=6.9e-28 Score=283.08 Aligned_cols=218 Identities=18% Similarity=0.247 Sum_probs=165.1
Q ss_pred cCCCCCHHHHHHHHHHHHhcCCCCCCCccCCC----CCCCCCCC------------ceeEeec-CceeEEEecCCccccc
Q 004994 24 CAGVTDPRDVMALNSLYISLNFPPLEKWLSFG----GDPCGDSW------------QGVFCVF-SNVTEIRLTGMNLGGV 86 (720)
Q Consensus 24 ~~~~~~~~~~~al~~~~~~l~~~~~~~w~~~~----~~~c~~~w------------~gv~c~~-~~l~~l~L~~n~l~~~ 86 (720)
.++.+..+|+.||++||+++++| +|...+ .+||+|.| .||.|+. .+|+.|+|++|+|.|.
T Consensus 262 ~~~~~~~~d~~ALl~~k~~l~~~---~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~~~~V~~L~Ls~~~L~G~ 338 (876)
T 4ecn_A 262 KETAEYIKDYKALKAIWEALDGK---NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDNNGRVTGLSLAGFGAKGR 338 (876)
T ss_dssp CCCCHHHHHHHHHHHHHHHTTGG---GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECTTSCEEEEECTTTCCEEE
T ss_pred cccccchHHHHHHHHHHHHcCCC---CCCcCCCcccccCCccccccccccccccCcCceEecCCCCEEEEECccCCCCCc
Confidence 34556678999999999999877 887544 47855599 9999985 7899999999999999
Q ss_pred CCcCcCCCCCccEEec-cCCccccc-------------------------------------------------------
Q 004994 87 LADTLGDLESVINIDL-SNNHIGGS------------------------------------------------------- 110 (720)
Q Consensus 87 ~~~~~~~l~~L~~L~L-~~N~l~g~------------------------------------------------------- 110 (720)
+|+.|++|++|+.|+| ++|.++|.
T Consensus 339 ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i~ 418 (876)
T 4ecn_A 339 VPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIK 418 (876)
T ss_dssp ECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCCC
T ss_pred CchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCccccccc
Confidence 9999999999999999 88877766
Q ss_pred ---------------------CCCCcc--ccCcEEEecCCcCCC-----------------CCcchhh--cccccccccc
Q 004994 111 ---------------------IPSNLP--VTVRNFSLSGNQLTG-----------------SIPESLS--RLTQLLDLSL 148 (720)
Q Consensus 111 ---------------------ip~~~~--~~L~~L~Ls~N~l~g-----------------~~p~~l~--~l~~L~~L~l 148 (720)
||..+. .+|+.|+|++|+|+| .+|..++ ++++|+.|+|
T Consensus 419 ~~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~L 498 (876)
T 4ecn_A 419 KDSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVEL 498 (876)
T ss_dssp CCCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEE
T ss_pred cccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEEC
Confidence 555554 577777777777776 3777766 7777777777
Q ss_pred cccccCCCCCchhcCCCCCceEeccCCc-ccc-cCCCCCCCCC-------CCceeeccccccccccc--cccccc-cceE
Q 004994 149 NNNHLNGGIPDAFHQFTGLINFDLSANN-LTG-QLPPSTRNLS-------SLYSLHLQNNKLSGTLN--VLEDLH-LIDL 216 (720)
Q Consensus 149 ~~N~l~g~~p~~~~~l~~L~~L~ls~N~-l~g-~~p~~~~~l~-------~L~~L~l~~N~l~~~~~--~~~~~~-l~~l 216 (720)
++|++.+.+|..|+++++|+.|+|++|+ |+| .+|..+++++ +|+.|+|++|+|+..+. .+..+. |+.|
T Consensus 499 s~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~~ip~~~~l~~L~~L~~L 578 (876)
T 4ecn_A 499 YNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLEEFPASASLQKMVKLGLL 578 (876)
T ss_dssp ESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCCBCCCHHHHTTCTTCCEE
T ss_pred cCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCCccCChhhhhcCCCCCEE
Confidence 7777777777777777777777777777 776 6666554444 77777777777774444 455554 7777
Q ss_pred EccCCcCcccCCcccCCCccccccCccCCC
Q 004994 217 NIENNLFSGPIPEKLLSIPNFRKDGNPFNT 246 (720)
Q Consensus 217 ~l~~N~l~g~~p~~~~~l~~l~~~~n~~~~ 246 (720)
+|++|+|+ .+| .+..+++|+..+...|.
T Consensus 579 ~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~ 606 (876)
T 4ecn_A 579 DCVHNKVR-HLE-AFGTNVKLTDLKLDYNQ 606 (876)
T ss_dssp ECTTSCCC-BCC-CCCTTSEESEEECCSSC
T ss_pred ECCCCCcc-cch-hhcCCCcceEEECcCCc
Confidence 77777777 677 66666666655444443
No 254
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.94 E-value=7.1e-27 Score=275.51 Aligned_cols=220 Identities=24% Similarity=0.285 Sum_probs=165.5
Q ss_pred CCCCCHHHHHHHHHHHHhcCCC-CCCCccCCCCCCCCCCCceeEeecCceeEEEecCCccccc---CC------------
Q 004994 25 AGVTDPRDVMALNSLYISLNFP-PLEKWLSFGGDPCGDSWQGVFCVFSNVTEIRLTGMNLGGV---LA------------ 88 (720)
Q Consensus 25 ~~~~~~~~~~al~~~~~~l~~~-~~~~w~~~~~~~c~~~w~gv~c~~~~l~~l~L~~n~l~~~---~~------------ 88 (720)
+++..++|+.||++||+++.|| .+.+|.. +.||| .|.||.|+.++|+.|+|+++.+.|. +|
T Consensus 6 ~~~~~~~~~~all~~k~~~~~~~~l~~W~~-~~~~C--~w~gv~C~~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~~l 82 (768)
T 3rgz_A 6 PSQSLYREIHQLISFKDVLPDKNLLPDWSS-NKNPC--TFDGVTCRDDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESL 82 (768)
T ss_dssp --CCHHHHHHHHHHHHTTCSCTTSSTTCCT-TSCGG--GSTTEEEETTEEEEEECTTSCCCEEHHHHHHHTTTCTTCCEE
T ss_pred cccCCHHHHHHHHHHHhhCCCcccccCCCC-CCCCc--CCcceEECCCcEEEEECCCCCcCCccCccChhHhccCccccc
Confidence 3455788999999999999887 6899973 56777 8999999988999999999999987 54
Q ss_pred -----------cCcCCCCCccEEeccCCcccccCCC--Ccc--ccCcEEEecCCcCCCCCcchh-hcccccccccccccc
Q 004994 89 -----------DTLGDLESVINIDLSNNHIGGSIPS--NLP--VTVRNFSLSGNQLTGSIPESL-SRLTQLLDLSLNNNH 152 (720)
Q Consensus 89 -----------~~~~~l~~L~~L~L~~N~l~g~ip~--~~~--~~L~~L~Ls~N~l~g~~p~~l-~~l~~L~~L~l~~N~ 152 (720)
+.|+.+++|++|||++|+++|.+|. .+. .+|++|+|++|.+++.+|..+ .++++|++|+|++|+
T Consensus 83 ~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~ 162 (768)
T 3rgz_A 83 FLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANS 162 (768)
T ss_dssp ECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSC
T ss_pred CCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCCc
Confidence 4666777777777777777777776 555 577777777777777777665 677777777777777
Q ss_pred cCCCCCch---hcCCCCCceEeccCCcccccCCCCCCCCCCCceeeccccccccccccccccc-cceEEccCCcCcccCC
Q 004994 153 LNGGIPDA---FHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNNKLSGTLNVLEDLH-LIDLNIENNLFSGPIP 228 (720)
Q Consensus 153 l~g~~p~~---~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~-l~~l~l~~N~l~g~~p 228 (720)
+++..|.. +.++++|++|+|++|.+++.+|. .++++|+.|+|++|++++.++.+..+. |++|++++|+++|.+|
T Consensus 163 l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~--~~l~~L~~L~Ls~n~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~ 240 (768)
T 3rgz_A 163 ISGANVVGWVLSDGCGELKHLAISGNKISGDVDV--SRCVNLEFLDVSSNNFSTGIPFLGDCSALQHLDISGNKLSGDFS 240 (768)
T ss_dssp CEEETHHHHHHTTCCTTCCEEECCSSEEESCCBC--TTCTTCCEEECCSSCCCSCCCBCTTCCSCCEEECCSSCCCSCHH
T ss_pred cCCcCChhhhhhccCCCCCEEECCCCcccccCCc--ccCCcCCEEECcCCcCCCCCcccccCCCCCEEECcCCcCCCccc
Confidence 77666665 66777777777777777765543 677788888888888877776666554 8888888888888888
Q ss_pred cccCCCccccccCccCCCccc
Q 004994 229 EKLLSIPNFRKDGNPFNTTVI 249 (720)
Q Consensus 229 ~~~~~l~~l~~~~n~~~~~~~ 249 (720)
..+..+++|+..+...|...+
T Consensus 241 ~~l~~l~~L~~L~Ls~n~l~~ 261 (768)
T 3rgz_A 241 RAISTCTELKLLNISSNQFVG 261 (768)
T ss_dssp HHTTTCSSCCEEECCSSCCEE
T ss_pred HHHhcCCCCCEEECCCCcccC
Confidence 877777777665555554433
No 255
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.94 E-value=2.1e-27 Score=273.82 Aligned_cols=216 Identities=20% Similarity=0.291 Sum_probs=174.5
Q ss_pred CCCCCHHHHHHHHHHHHhcCCC----------CCCCccCCCCCCCCCCC---ceeEeec-CceeEEEecCCcccccCCcC
Q 004994 25 AGVTDPRDVMALNSLYISLNFP----------PLEKWLSFGGDPCGDSW---QGVFCVF-SNVTEIRLTGMNLGGVLADT 90 (720)
Q Consensus 25 ~~~~~~~~~~al~~~~~~l~~~----------~~~~w~~~~~~~c~~~w---~gv~c~~-~~l~~l~L~~n~l~~~~~~~ 90 (720)
++.....|+.||.++|.+++.+ ...+|.. +.++| .| .||.|+. .+|+.|+|++|+++|.+|+.
T Consensus 24 ~~~~~~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~-~~~~c--~w~~~~GV~C~~~~~V~~L~L~~~~l~g~lp~~ 100 (636)
T 4eco_A 24 RTAEYIKDYLALKEIWDALNGKNWSQQGFGTQPGANWNF-NKELD--MWGAQPGVSLNSNGRVTGLSLEGFGASGRVPDA 100 (636)
T ss_dssp CCCHHHHHHHHHHHHHHHTTGGGCCCCC------CCCCC-SSCGG--GTTCCTTEEECTTCCEEEEECTTSCCEEEECGG
T ss_pred hhhhHHHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCC-CCCcc--cccCCCCeEEcCCCCEEEEEecCcccCCcCChH
Confidence 3445567999999999998654 1337874 56777 89 9999965 59999999999999999999
Q ss_pred cCCCCCccEEeccCCc----------------------------------------------------------------
Q 004994 91 LGDLESVINIDLSNNH---------------------------------------------------------------- 106 (720)
Q Consensus 91 ~~~l~~L~~L~L~~N~---------------------------------------------------------------- 106 (720)
|++|++|++|+|++|.
T Consensus 101 l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~ 180 (636)
T 4eco_A 101 IGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSR 180 (636)
T ss_dssp GGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCC
T ss_pred HhcCccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCccccccccccc
Confidence 9999999999999984
Q ss_pred --------------ccccCCCCcc--ccCcEEEecCCcCCCC-----------------Ccchhh--ccccccccccccc
Q 004994 107 --------------IGGSIPSNLP--VTVRNFSLSGNQLTGS-----------------IPESLS--RLTQLLDLSLNNN 151 (720)
Q Consensus 107 --------------l~g~ip~~~~--~~L~~L~Ls~N~l~g~-----------------~p~~l~--~l~~L~~L~l~~N 151 (720)
|+| ||..+. ++|++|+|++|+|+|. +|..++ ++++|++|+|++|
T Consensus 181 ~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n 259 (636)
T 4eco_A 181 ITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNC 259 (636)
T ss_dssp CCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECC
T ss_pred cchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCC
Confidence 444 777775 6888888888888875 888888 8888888888888
Q ss_pred ccCCCCCchhcCCCCCceEeccCCc-ccc-cCCCCCCCC------CCCceeeccccccccccc--cccccc-cceEEccC
Q 004994 152 HLNGGIPDAFHQFTGLINFDLSANN-LTG-QLPPSTRNL------SSLYSLHLQNNKLSGTLN--VLEDLH-LIDLNIEN 220 (720)
Q Consensus 152 ~l~g~~p~~~~~l~~L~~L~ls~N~-l~g-~~p~~~~~l------~~L~~L~l~~N~l~~~~~--~~~~~~-l~~l~l~~ 220 (720)
++.|.+|..|+++++|+.|+|++|+ ++| .+|..++++ ++|+.|+|++|+|+..+. .+..+. |+.|++++
T Consensus 260 ~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~~ip~~~~l~~l~~L~~L~L~~ 339 (636)
T 4eco_A 260 PNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLKTFPVETSLQKMKKLGMLECLY 339 (636)
T ss_dssp TTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCSSCCCHHHHTTCTTCCEEECCS
T ss_pred cCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCCccCchhhhccCCCCCEEeCcC
Confidence 8888888888888888888888888 887 788877776 888888888888885555 566665 88888888
Q ss_pred CcCcccCCcccCCCccccccCccCC
Q 004994 221 NLFSGPIPEKLLSIPNFRKDGNPFN 245 (720)
Q Consensus 221 N~l~g~~p~~~~~l~~l~~~~n~~~ 245 (720)
|+++|.+| .+..+++|+..+...|
T Consensus 340 N~l~g~ip-~~~~l~~L~~L~L~~N 363 (636)
T 4eco_A 340 NQLEGKLP-AFGSEIKLASLNLAYN 363 (636)
T ss_dssp CCCEEECC-CCEEEEEESEEECCSS
T ss_pred CcCccchh-hhCCCCCCCEEECCCC
Confidence 88888888 7776666665544444
No 256
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.93 E-value=2e-26 Score=243.54 Aligned_cols=220 Identities=17% Similarity=0.203 Sum_probs=191.5
Q ss_pred CCCHHHHHHHHHHHHhc-CCC--CCCCcc---CCCCCCCCCCCceeEee----------cCceeEEEecCCcccccCCcC
Q 004994 27 VTDPRDVMALNSLYISL-NFP--PLEKWL---SFGGDPCGDSWQGVFCV----------FSNVTEIRLTGMNLGGVLADT 90 (720)
Q Consensus 27 ~~~~~~~~al~~~~~~l-~~~--~~~~w~---~~~~~~c~~~w~gv~c~----------~~~l~~l~L~~n~l~~~~~~~ 90 (720)
....+|+.||++||+++ .++ .+..|. ....++| .|.|+.|. .++|+.|+|++|+++ .+|+.
T Consensus 23 ~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~--~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~ 99 (328)
T 4fcg_A 23 TALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIE--TRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQ 99 (328)
T ss_dssp CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSC--CSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCSC
T ss_pred ccCchHHHHHHHHHHhccCCchhhhhhhccccccccccc--ccCCcchhhhHHHHhcccccceeEEEccCCCch-hcChh
Confidence 44567999999999988 344 256784 3345566 79999995 378999999999999 78889
Q ss_pred cCCCCCccEEeccCCcccccCCCCcc--ccCcEEEecCCcCCCCCcchhhcccccccccccccccCCCCCchhcC-----
Q 004994 91 LGDLESVINIDLSNNHIGGSIPSNLP--VTVRNFSLSGNQLTGSIPESLSRLTQLLDLSLNNNHLNGGIPDAFHQ----- 163 (720)
Q Consensus 91 ~~~l~~L~~L~L~~N~l~g~ip~~~~--~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~l~~N~l~g~~p~~~~~----- 163 (720)
++.+++|++|+|++|+|+ .+|..+. .+|++|+|++|+|+ .+|..|+++++|++|+|++|++.+.+|..+..
T Consensus 100 l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~ 177 (328)
T 4fcg_A 100 AFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASG 177 (328)
T ss_dssp GGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CC
T ss_pred hhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchh
Confidence 999999999999999999 9999887 79999999999999 88999999999999999999999999988765
Q ss_pred ----CCCCceEeccCCcccccCCCCCCCCCCCceeeccccccccccccccccc-cceEEccCCcCcccCCcccCCCcccc
Q 004994 164 ----FTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNNKLSGTLNVLEDLH-LIDLNIENNLFSGPIPEKLLSIPNFR 238 (720)
Q Consensus 164 ----l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~-l~~l~l~~N~l~g~~p~~~~~l~~l~ 238 (720)
+++|+.|+|++|+|+ .+|..+.++++|+.|+|++|++++.++.+..+. |+.|+|++|++.+.+|..+..+++|+
T Consensus 178 ~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~ 256 (328)
T 4fcg_A 178 EHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLK 256 (328)
T ss_dssp CEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCCCCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCC
T ss_pred hhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCcCchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCC
Confidence 999999999999999 899999999999999999999999887777665 99999999999999999998888888
Q ss_pred ccCccCCCcccCCC
Q 004994 239 KDGNPFNTTVIALP 252 (720)
Q Consensus 239 ~~~n~~~~~~~~~~ 252 (720)
..+...|......|
T Consensus 257 ~L~L~~n~~~~~~p 270 (328)
T 4fcg_A 257 RLILKDCSNLLTLP 270 (328)
T ss_dssp EEECTTCTTCCBCC
T ss_pred EEECCCCCchhhcc
Confidence 76666554444333
No 257
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.91 E-value=7.9e-26 Score=254.17 Aligned_cols=186 Identities=13% Similarity=0.187 Sum_probs=143.4
Q ss_pred CCCeeccCCCceEEEEEeCCCcEEEEEEecccccc------cccHHHHHHHHHHHHccCCCceeEEEeEeccCCeEEEEE
Q 004994 444 EGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQ------RQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVY 517 (720)
Q Consensus 444 ~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~------~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 517 (720)
..+.||+|+||+||+|.. .++.+|+|+....... ....+.+.+|++++++++||||+++..++...+..++||
T Consensus 340 ~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVm 418 (540)
T 3en9_A 340 PEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMM 418 (540)
T ss_dssp --------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEE
T ss_pred CCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEE
Confidence 357899999999999954 5678899986543211 112356899999999999999995555555666779999
Q ss_pred eeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCC
Q 004994 518 DYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFS 597 (720)
Q Consensus 518 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~ 597 (720)
||+++++|.+++.. +..++.|+++||+|||+. +|+||||||+|||++. ++||+|||+|+....
T Consensus 419 E~~~ggsL~~~l~~------------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~ 481 (540)
T 3en9_A 419 SYINGKLAKDVIED------------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIIDFGLGKISNL 481 (540)
T ss_dssp ECCCSEEHHHHSTT------------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECCCTTCEECCC
T ss_pred ECCCCCCHHHHHHH------------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEECccCEECCC
Confidence 99999999999853 457999999999999987 9999999999999999 999999999988743
Q ss_pred CCCcc-----cccCccccccCCCCccCC---CCCCCccchHhHHHHHHHHHhCCCCCC
Q 004994 598 GSTNE-----LSEGLLTAHGSGAPEFES---GSYSCQSDVYSLGVVMLELLTGRKPYD 647 (720)
Q Consensus 598 ~~~~~-----~~~~~~~~~~~~aPE~~~---~~~~~~~Dv~S~Gvvl~elltG~~Pf~ 647 (720)
..... ......+|+.|+|||++. ..|+..+|+||..+-.++-+.++.+|.
T Consensus 482 ~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 482 DEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp HHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred ccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 22111 123467899999999984 357888999999999999998887773
No 258
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.90 E-value=5.1e-24 Score=223.63 Aligned_cols=187 Identities=25% Similarity=0.457 Sum_probs=123.2
Q ss_pred eEeecCceeEEEecC-CcccccCCcCcCCCCCccEEeccCCcccccCCCCcc--ccCcEEEecCCcCCCCCcchhhcccc
Q 004994 66 VFCVFSNVTEIRLTG-MNLGGVLADTLGDLESVINIDLSNNHIGGSIPSNLP--VTVRNFSLSGNQLTGSIPESLSRLTQ 142 (720)
Q Consensus 66 v~c~~~~l~~l~L~~-n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~--~~L~~L~Ls~N~l~g~~p~~l~~l~~ 142 (720)
.++.+++|+.|+|++ |++.+.+|..|+.+++|++|+|++|+|++.+|..+. .+|++|+|++|++++.+|..|.++++
T Consensus 71 ~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 150 (313)
T 1ogq_A 71 SLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPN 150 (313)
T ss_dssp GGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTT
T ss_pred hHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCC
Confidence 445567777777774 777777777777777777777777777777776665 56777777777777777777777777
Q ss_pred cccccccccccCCCCCchhcCCC-CCceEeccCCcccccCCCC-----------------------CCCCCCCceeeccc
Q 004994 143 LLDLSLNNNHLNGGIPDAFHQFT-GLINFDLSANNLTGQLPPS-----------------------TRNLSSLYSLHLQN 198 (720)
Q Consensus 143 L~~L~l~~N~l~g~~p~~~~~l~-~L~~L~ls~N~l~g~~p~~-----------------------~~~l~~L~~L~l~~ 198 (720)
|++|+|++|+++|.+|..++.++ +|+.|+|++|++++.+|.. +..+++|+.|+|++
T Consensus 151 L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 230 (313)
T 1ogq_A 151 LVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAK 230 (313)
T ss_dssp CCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCSEEECCSSEEEECCGGGCCTTSCCSEEECCS
T ss_pred CCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCcccEEECcCCcccCcCCHHHhcCCCCCEEECCC
Confidence 77777777777766776666665 6666666666666555544 44555555555555
Q ss_pred cccccccccccccc-cceEEccCCcCcccCCcccCCCccccccCccCCCcccCCC
Q 004994 199 NKLSGTLNVLEDLH-LIDLNIENNLFSGPIPEKLLSIPNFRKDGNPFNTTVIALP 252 (720)
Q Consensus 199 N~l~~~~~~~~~~~-l~~l~l~~N~l~g~~p~~~~~l~~l~~~~n~~~~~~~~~~ 252 (720)
|++++.++.+..+. |++|+|++|+|+|.+|..+..+++|+..+...|...+.+|
T Consensus 231 N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip 285 (313)
T 1ogq_A 231 NSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP 285 (313)
T ss_dssp SEECCBGGGCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECC
T ss_pred CceeeecCcccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCC
Confidence 55555554444433 7777777777777777777666666655555554443333
No 259
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.89 E-value=1.7e-23 Score=246.76 Aligned_cols=190 Identities=27% Similarity=0.411 Sum_probs=139.8
Q ss_pred eeEeecCceeEEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCCCcc--ccCcEEEecCCcCCCCCcchhhcccc
Q 004994 65 GVFCVFSNVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSNLP--VTVRNFSLSGNQLTGSIPESLSRLTQ 142 (720)
Q Consensus 65 gv~c~~~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~--~~L~~L~Ls~N~l~g~~p~~l~~l~~ 142 (720)
..++.+++|+.|+|++|+++|.+|..++.+++|++|+|++|+++|.+|..+. ++|+.|+|++|+++|.+|..++++++
T Consensus 460 ~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~ 539 (768)
T 3rgz_A 460 QELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRS 539 (768)
T ss_dssp GGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTT
T ss_pred HHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCC
Confidence 3444566777777777777777777777777777777777777777777665 57777777777777777777777777
Q ss_pred cccccccccccCCCCCchhc------------------------------------------------------------
Q 004994 143 LLDLSLNNNHLNGGIPDAFH------------------------------------------------------------ 162 (720)
Q Consensus 143 L~~L~l~~N~l~g~~p~~~~------------------------------------------------------------ 162 (720)
|+.|+|++|+++|.+|..+.
T Consensus 540 L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~ 619 (768)
T 3rgz_A 540 LIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRV 619 (768)
T ss_dssp CCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCE
T ss_pred CCEEECCCCccCCcCChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccce
Confidence 77777777777776665443
Q ss_pred ----------CCCCCceEeccCCcccccCCCCCCCCCCCceeeccccccccccc-cccccc-cceEEccCCcCcccCCcc
Q 004994 163 ----------QFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNNKLSGTLN-VLEDLH-LIDLNIENNLFSGPIPEK 230 (720)
Q Consensus 163 ----------~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~~-l~~l~l~~N~l~g~~p~~ 230 (720)
++++|+.|||++|+|+|.+|..++++++|+.|+|++|+|+|.+| .+..+. |+.|||++|+++|.+|..
T Consensus 620 ~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~ 699 (768)
T 3rgz_A 620 YGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQA 699 (768)
T ss_dssp EEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGG
T ss_pred ecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChH
Confidence 24567778888888888888888888888888888888887664 455555 888888888888888888
Q ss_pred cCCCccccccCccCCCcccCCCCC
Q 004994 231 LLSIPNFRKDGNPFNTTVIALPPT 254 (720)
Q Consensus 231 ~~~l~~l~~~~n~~~~~~~~~~~~ 254 (720)
+.+++.|+..+.++|...+.+|..
T Consensus 700 l~~l~~L~~L~ls~N~l~g~iP~~ 723 (768)
T 3rgz_A 700 MSALTMLTEIDLSNNNLSGPIPEM 723 (768)
T ss_dssp GGGCCCCSEEECCSSEEEEECCSS
T ss_pred HhCCCCCCEEECcCCcccccCCCc
Confidence 877777777777777666666543
No 260
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.88 E-value=5.1e-22 Score=203.77 Aligned_cols=175 Identities=22% Similarity=0.326 Sum_probs=105.0
Q ss_pred ceeEEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCCCc-c--ccCcEEEecCCcCCCCCcchhhcccccccccc
Q 004994 72 NVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSNL-P--VTVRNFSLSGNQLTGSIPESLSRLTQLLDLSL 148 (720)
Q Consensus 72 ~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~-~--~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~l 148 (720)
+++.|+|++|++++..+..|..+++|++|+|++|+|+ .+|..+ . .+|++|+|++|++++..+..|.++++|+.|+|
T Consensus 38 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 116 (270)
T 2o6q_A 38 DTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQ-TLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRL 116 (270)
T ss_dssp TCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCS-CCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEEC
T ss_pred CCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccC-eeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEEC
Confidence 3566666666666655556666666666666666666 444332 2 56666666666666555555666666666666
Q ss_pred cccccCCCCCchhcCCCCCceEeccCCcccccCCCCCCCCCCCceeecccccccccccc-cccc-ccceEEccCCcCccc
Q 004994 149 NNNHLNGGIPDAFHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNNKLSGTLNV-LEDL-HLIDLNIENNLFSGP 226 (720)
Q Consensus 149 ~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~-~l~~l~l~~N~l~g~ 226 (720)
++|++++..|..|.++++|+.|+|++|+|++..+..+..+++|+.|+|++|++++.++. +..+ .|+.|+|++|++++.
T Consensus 117 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 196 (270)
T 2o6q_A 117 DRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRV 196 (270)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcC
Confidence 66666655555666666666666666666644444466666666666666666665542 3333 366666666666644
Q ss_pred CCcccCCCc---cccccCccCCCc
Q 004994 227 IPEKLLSIP---NFRKDGNPFNTT 247 (720)
Q Consensus 227 ~p~~~~~l~---~l~~~~n~~~~~ 247 (720)
.+..+..++ .|.+.+|+|.|.
T Consensus 197 ~~~~~~~l~~L~~L~l~~N~~~c~ 220 (270)
T 2o6q_A 197 PEGAFDSLEKLKMLQLQENPWDCT 220 (270)
T ss_dssp CTTTTTTCTTCCEEECCSSCBCCS
T ss_pred CHHHhccccCCCEEEecCCCeeCC
Confidence 443343333 344455555443
No 261
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.87 E-value=2e-22 Score=198.33 Aligned_cols=175 Identities=24% Similarity=0.244 Sum_probs=150.9
Q ss_pred CCCCCCCceeEeec-----------CceeEEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCCCcc--ccCcEEE
Q 004994 57 DPCGDSWQGVFCVF-----------SNVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSNLP--VTVRNFS 123 (720)
Q Consensus 57 ~~c~~~w~gv~c~~-----------~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~--~~L~~L~ 123 (720)
+.|.|.|.++.|.. ++|+.|+|++|++++..+..|..+++|++|+|++|+|++..+..+. .+|++|+
T Consensus 3 ~~C~C~~~~v~c~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 82 (208)
T 2o6s_A 3 SRCSCSGTTVECYSQGRTSVPTGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLN 82 (208)
T ss_dssp TTCEEETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCEECCCEEEecCCCccCCCCCCCCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEE
Confidence 46777899999963 3689999999999988778899999999999999999954444444 7899999
Q ss_pred ecCCcCCCCCcchhhcccccccccccccccCCCCCchhcCCCCCceEeccCCcccccCCCCCCCCCCCceeecccccccc
Q 004994 124 LSGNQLTGSIPESLSRLTQLLDLSLNNNHLNGGIPDAFHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNNKLSG 203 (720)
Q Consensus 124 Ls~N~l~g~~p~~l~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~ 203 (720)
|++|+|++..+..|.++++|+.|+|++|+|++..+..|.++++|+.|+|++|+|++..+..+..+++|+.|+|++|.+.+
T Consensus 83 Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 162 (208)
T 2o6s_A 83 LSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC 162 (208)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC
T ss_pred CCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeec
Confidence 99999997777778999999999999999997777778999999999999999996666668999999999999999887
Q ss_pred ccccccccccceEEccCCcCcccCCcccCCCcc
Q 004994 204 TLNVLEDLHLIDLNIENNLFSGPIPEKLLSIPN 236 (720)
Q Consensus 204 ~~~~~~~~~l~~l~l~~N~l~g~~p~~~~~l~~ 236 (720)
..+ .|+.|+++.|+++|.+|..++.++.
T Consensus 163 ~~~-----~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 163 TCP-----GIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp CTT-----TTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred CCC-----CHHHHHHHHHhCCceeeccCccccC
Confidence 554 3678889999999999998887653
No 262
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.86 E-value=7.7e-22 Score=208.32 Aligned_cols=182 Identities=18% Similarity=0.282 Sum_probs=127.0
Q ss_pred EeecCceeEEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCCCcc--ccCcEEEecCCcCCCCCcchhhc-----
Q 004994 67 FCVFSNVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSNLP--VTVRNFSLSGNQLTGSIPESLSR----- 139 (720)
Q Consensus 67 ~c~~~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~--~~L~~L~Ls~N~l~g~~p~~l~~----- 139 (720)
+..+++|+.|+|++|+++ .+|..++.+++|++|+|++|+|+ .+|..+. .+|+.|+|++|++.+.+|..+..
T Consensus 100 l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~ 177 (328)
T 4fcg_A 100 AFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASG 177 (328)
T ss_dssp GGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CC
T ss_pred hhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchh
Confidence 334677777788777777 67777777777777777777777 6776665 57777777777777777776654
Q ss_pred ----ccccccccccccccCCCCCchhcCCCCCceEeccCCcccccCCCCCCCCCCCceeeccccccccccc-cccccc-c
Q 004994 140 ----LTQLLDLSLNNNHLNGGIPDAFHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNNKLSGTLN-VLEDLH-L 213 (720)
Q Consensus 140 ----l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~~-l 213 (720)
+++|+.|+|++|+|+ .+|..|+++++|+.|+|++|+++ .+|..+..+++|+.|+|++|++.+.++ .+..+. |
T Consensus 178 ~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~-~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L 255 (328)
T 4fcg_A 178 EHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS-ALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPL 255 (328)
T ss_dssp CEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCC-CCCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCC
T ss_pred hhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCC-cCchhhccCCCCCEEECcCCcchhhhHHHhcCCCCC
Confidence 777777777777777 67777777777777777777777 466667777777777777777766654 344443 7
Q ss_pred ceEEccCCcCcccCCcccCCCccccccCccCCCcccCCC
Q 004994 214 IDLNIENNLFSGPIPEKLLSIPNFRKDGNPFNTTVIALP 252 (720)
Q Consensus 214 ~~l~l~~N~l~g~~p~~~~~l~~l~~~~n~~~~~~~~~~ 252 (720)
+.|+|++|++.+.+|..+.++++|+..+...|...+..|
T Consensus 256 ~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP 294 (328)
T 4fcg_A 256 KRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLP 294 (328)
T ss_dssp CEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCC
T ss_pred CEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhcc
Confidence 777777777777777766666666655555544444433
No 263
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.86 E-value=2.5e-22 Score=207.00 Aligned_cols=145 Identities=12% Similarity=0.037 Sum_probs=113.6
Q ss_pred HHHHHHHhcCCCCCCeeccCCCceEEEEEeCCCcEEEEEEeccccccc----------------ccHHHHHHHHHHHHcc
Q 004994 432 IASLQQYTNSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQR----------------QTDEEFLELASTISRL 495 (720)
Q Consensus 432 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~----------------~~~~~~~~e~~~l~~l 495 (720)
+..+......|...+.||+|+||.||+|...+|+.||||.++...... .....+.+|+++++++
T Consensus 82 l~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l 161 (282)
T 1zar_A 82 LHRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKL 161 (282)
T ss_dssp HHHHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhc
Confidence 344445556676779999999999999977789999999996432111 1346789999999999
Q ss_pred CCCceeEEEeEeccCCeEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCC
Q 004994 496 RHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSN 575 (720)
Q Consensus 496 ~H~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~N 575 (720)
+| +++.+++.. +..++||||+++++|.+ +.. .....++.++++||.|||+. +||||||||+|
T Consensus 162 ~~---~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~----------~~~~~i~~qi~~~l~~lH~~---giiHrDlkp~N 223 (282)
T 1zar_A 162 QG---LAVPKVYAW-EGNAVLMELIDAKELYR-VRV----------ENPDEVLDMILEEVAKFYHR---GIVHGDLSQYN 223 (282)
T ss_dssp TT---SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC----------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTS
T ss_pred cC---CCcCeEEec-cceEEEEEecCCCcHHH-cch----------hhHHHHHHHHHHHHHHHHHC---CCEeCCCCHHH
Confidence 84 555554433 45699999999999988 421 11336999999999999987 99999999999
Q ss_pred eEEcCCCCeEEccccCCCCC
Q 004994 576 ILLDEKLIVRVSDCGLAPLL 595 (720)
Q Consensus 576 iLl~~~~~~kl~DFGla~~~ 595 (720)
||++ ++.+||+|||+|+..
T Consensus 224 ILl~-~~~vkl~DFG~a~~~ 242 (282)
T 1zar_A 224 VLVS-EEGIWIIDFPQSVEV 242 (282)
T ss_dssp EEEE-TTEEEECCCTTCEET
T ss_pred EEEE-CCcEEEEECCCCeEC
Confidence 9999 999999999998643
No 264
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.86 E-value=2.2e-21 Score=196.74 Aligned_cols=181 Identities=21% Similarity=0.262 Sum_probs=152.6
Q ss_pred CCceeEeecCceeEEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCCCcc--ccCcEEEecCCcCCCCCcchhhc
Q 004994 62 SWQGVFCVFSNVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSNLP--VTVRNFSLSGNQLTGSIPESLSR 139 (720)
Q Consensus 62 ~w~gv~c~~~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~--~~L~~L~Ls~N~l~g~~p~~l~~ 139 (720)
.|.|..|. .+.+.+++++++++. +|..+. ++|+.|+|++|++++..|..+. .+|+.|+|++|+|++..|..|.+
T Consensus 6 ~~~gC~C~-~~~~~l~~~~~~l~~-~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 81 (251)
T 3m19_A 6 TVTGCTCN-EGKKEVDCQGKSLDS-VPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDD 81 (251)
T ss_dssp HHHSSEEE-GGGTEEECTTCCCSS-CCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTT
T ss_pred CCCceEcC-CCCeEEecCCCCccc-cCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhcc
Confidence 68898885 456789999999984 666655 6899999999999977777776 78999999999999888888999
Q ss_pred ccccccccccccccCCCCCchhcCCCCCceEeccCCcccccCCCCCCCCCCCceeeccccccccccc-cccccc-cceEE
Q 004994 140 LTQLLDLSLNNNHLNGGIPDAFHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNNKLSGTLN-VLEDLH-LIDLN 217 (720)
Q Consensus 140 l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~~-l~~l~ 217 (720)
+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|++..+..+..+++|+.|+|++|+|++.++ .+..+. |+.|+
T Consensus 82 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 161 (251)
T 3m19_A 82 LTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLS 161 (251)
T ss_dssp CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEE
Confidence 9999999999999998777889999999999999999996666668999999999999999998886 465554 99999
Q ss_pred ccCCcCcccCCcccCCCccc---cccCccCCC
Q 004994 218 IENNLFSGPIPEKLLSIPNF---RKDGNPFNT 246 (720)
Q Consensus 218 l~~N~l~g~~p~~~~~l~~l---~~~~n~~~~ 246 (720)
|++|+|++..|..+..+++| .+.+|++.|
T Consensus 162 L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 193 (251)
T 3m19_A 162 LSTNQLQSVPHGAFDRLGKLQTITLFGNQFDC 193 (251)
T ss_dssp CCSSCCSCCCTTTTTTCTTCCEEECCSCCBCT
T ss_pred CCCCcCCccCHHHHhCCCCCCEEEeeCCceeC
Confidence 99999997777667665554 456666653
No 265
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.85 E-value=7.9e-21 Score=196.84 Aligned_cols=176 Identities=23% Similarity=0.200 Sum_probs=151.2
Q ss_pred CceeEEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCCCccccCcEEEecCCcCCCCCcchhhcccccccccccc
Q 004994 71 SNVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSNLPVTVRNFSLSGNQLTGSIPESLSRLTQLLDLSLNN 150 (720)
Q Consensus 71 ~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~l~~ 150 (720)
++++.|+|++|++++..+..|..+++|+.|+|++|+|++..+..-..+|+.|+|++|+|+ .+|..+.++++|+.|+|++
T Consensus 31 ~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~ 109 (290)
T 1p9a_G 31 KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVDGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSF 109 (290)
T ss_dssp TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECCSCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCS
T ss_pred CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCCCCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCC
Confidence 578999999999999888999999999999999999995444333378999999999999 8898999999999999999
Q ss_pred cccCCCCCchhcCCCCCceEeccCCcccccCCCCCCCCCCCceeecccccccccccc-ccccc-cceEEccCCcCcccCC
Q 004994 151 NHLNGGIPDAFHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNNKLSGTLNV-LEDLH-LIDLNIENNLFSGPIP 228 (720)
Q Consensus 151 N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~-l~~l~l~~N~l~g~~p 228 (720)
|+|++..|..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|+|++.++. +..+. |+.|+|++|+|+ .+|
T Consensus 110 N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip 188 (290)
T 1p9a_G 110 NRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIP 188 (290)
T ss_dssp SCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCC
T ss_pred CcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccC
Confidence 999987778899999999999999999976667788999999999999999988754 45454 999999999999 788
Q ss_pred cccCCCc---cccccCccCCCcc
Q 004994 229 EKLLSIP---NFRKDGNPFNTTV 248 (720)
Q Consensus 229 ~~~~~l~---~l~~~~n~~~~~~ 248 (720)
..+..+. .+.+.+|+|.|.|
T Consensus 189 ~~~~~~~~L~~l~L~~Np~~C~c 211 (290)
T 1p9a_G 189 KGFFGSHLLPFAFLHGNPWLCNC 211 (290)
T ss_dssp TTTTTTCCCSEEECCSCCBCCSG
T ss_pred hhhcccccCCeEEeCCCCccCcC
Confidence 8776544 4556788887654
No 266
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.84 E-value=1.2e-20 Score=195.26 Aligned_cols=176 Identities=21% Similarity=0.223 Sum_probs=154.1
Q ss_pred CceeEEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCCCcc--ccCcEEEecCCc-CCCCCcchhhccccccccc
Q 004994 71 SNVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSNLP--VTVRNFSLSGNQ-LTGSIPESLSRLTQLLDLS 147 (720)
Q Consensus 71 ~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~--~~L~~L~Ls~N~-l~g~~p~~l~~l~~L~~L~ 147 (720)
++|+.|+|++|++++..+..|..+++|++|+|++|++++..|..+. .+|++|+|++|. ++...|..|.++++|++|+
T Consensus 32 ~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~ 111 (285)
T 1ozn_A 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLH 111 (285)
T ss_dssp TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEE
T ss_pred CCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEE
Confidence 4789999999999998888899999999999999999977788776 789999999997 8866688899999999999
Q ss_pred ccccccCCCCCchhcCCCCCceEeccCCcccccCCCCCCCCCCCceeecccccccccccc-ccccc-cceEEccCCcCcc
Q 004994 148 LNNNHLNGGIPDAFHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNNKLSGTLNV-LEDLH-LIDLNIENNLFSG 225 (720)
Q Consensus 148 l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~-l~~l~l~~N~l~g 225 (720)
|++|.+++..|..|.++++|++|+|++|++++..+..+..+++|+.|+|++|+|++.++. +..+. |+.|++++|.+++
T Consensus 112 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 191 (285)
T 1ozn_A 112 LDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAH 191 (285)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCE
T ss_pred CCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccc
Confidence 999999988888899999999999999999966666789999999999999999987753 55554 9999999999999
Q ss_pred cCCcccCCCccccccCccCCC
Q 004994 226 PIPEKLLSIPNFRKDGNPFNT 246 (720)
Q Consensus 226 ~~p~~~~~l~~l~~~~n~~~~ 246 (720)
..|..+..+++|+..+...|.
T Consensus 192 ~~~~~~~~l~~L~~L~l~~n~ 212 (285)
T 1ozn_A 192 VHPHAFRDLGRLMTLYLFANN 212 (285)
T ss_dssp ECTTTTTTCTTCCEEECCSSC
T ss_pred cCHhHccCcccccEeeCCCCc
Confidence 889988887777766555543
No 267
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.84 E-value=6.2e-21 Score=197.32 Aligned_cols=183 Identities=24% Similarity=0.289 Sum_probs=157.6
Q ss_pred eEeecCceeEEEecCCcccccCCcCcCCCCCccEEeccCCc-ccccCCCCcc--ccCcEEEecCCcCCCCCcchhhcccc
Q 004994 66 VFCVFSNVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNH-IGGSIPSNLP--VTVRNFSLSGNQLTGSIPESLSRLTQ 142 (720)
Q Consensus 66 v~c~~~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~-l~g~ip~~~~--~~L~~L~Ls~N~l~g~~p~~l~~l~~ 142 (720)
.+..+++|+.|+|++|++++..|..|..+++|++|+|++|+ +.+..|..+. .+|++|+|++|++++..|..|.++++
T Consensus 51 ~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~ 130 (285)
T 1ozn_A 51 SFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAA 130 (285)
T ss_dssp TTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTT
T ss_pred HcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcC
Confidence 34567899999999999999889999999999999999998 7755577775 79999999999999888999999999
Q ss_pred cccccccccccCCCCCchhcCCCCCceEeccCCcccccCCCCCCCCCCCceeecccccccccc-ccccccc-cceEEccC
Q 004994 143 LLDLSLNNNHLNGGIPDAFHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNNKLSGTL-NVLEDLH-LIDLNIEN 220 (720)
Q Consensus 143 L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~-~~~~~~~-l~~l~l~~ 220 (720)
|++|+|++|++++..+..|.++++|+.|+|++|++++..+..+..+++|+.|+|++|.+++.. ..+..+. |+.|++++
T Consensus 131 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 210 (285)
T 1ozn_A 131 LQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFA 210 (285)
T ss_dssp CCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCC
Confidence 999999999999777777999999999999999999666667999999999999999999885 4555554 99999999
Q ss_pred CcCcccCCcccCCCcc---ccccCccCCCcc
Q 004994 221 NLFSGPIPEKLLSIPN---FRKDGNPFNTTV 248 (720)
Q Consensus 221 N~l~g~~p~~~~~l~~---l~~~~n~~~~~~ 248 (720)
|++++..|..+..+++ |.+.+|++.|.+
T Consensus 211 n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~ 241 (285)
T 1ozn_A 211 NNLSALPTEALAPLRALQYLRLNDNPWVCDC 241 (285)
T ss_dssp SCCSCCCHHHHTTCTTCCEEECCSSCEECSG
T ss_pred CcCCcCCHHHcccCcccCEEeccCCCccCCC
Confidence 9999766665665555 556777776544
No 268
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.83 E-value=2.5e-20 Score=188.97 Aligned_cols=158 Identities=22% Similarity=0.278 Sum_probs=142.3
Q ss_pred CceeEEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCCCcc--ccCcEEEecCCcCCCCCcchhhcccccccccc
Q 004994 71 SNVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSNLP--VTVRNFSLSGNQLTGSIPESLSRLTQLLDLSL 148 (720)
Q Consensus 71 ~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~--~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~l 148 (720)
.+++.|+|++|++++..+..|..+++|++|+|++|+|++..|..+. .+|+.|+|++|+|++..+..|.++++|+.|+|
T Consensus 35 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 114 (251)
T 3m19_A 35 ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYL 114 (251)
T ss_dssp TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEc
Confidence 4689999999999999999999999999999999999977776665 79999999999999887788999999999999
Q ss_pred cccccCCCCCchhcCCCCCceEeccCCcccccCCCCCCCCCCCceeeccccccccccc-cccccc-cceEEccCCcCccc
Q 004994 149 NNNHLNGGIPDAFHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNNKLSGTLN-VLEDLH-LIDLNIENNLFSGP 226 (720)
Q Consensus 149 ~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~~-l~~l~l~~N~l~g~ 226 (720)
++|+|++..+..|.++++|+.|+|++|+|++..+..+..+++|+.|+|++|+|++.++ .+..+. |+.|+|++|.+++.
T Consensus 115 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 115 GGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred CCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 9999997777778999999999999999996666689999999999999999998875 455554 99999999999976
Q ss_pred CC
Q 004994 227 IP 228 (720)
Q Consensus 227 ~p 228 (720)
..
T Consensus 195 ~~ 196 (251)
T 3m19_A 195 RC 196 (251)
T ss_dssp ST
T ss_pred cc
Confidence 33
No 269
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.83 E-value=7.3e-21 Score=198.91 Aligned_cols=188 Identities=19% Similarity=0.246 Sum_probs=143.5
Q ss_pred CCCCCCCceeEeec-----------CceeEEEecCCcccccCCcCcCCCCCccEEeccCCccccc--CCCCcc--ccCcE
Q 004994 57 DPCGDSWQGVFCVF-----------SNVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGS--IPSNLP--VTVRN 121 (720)
Q Consensus 57 ~~c~~~w~gv~c~~-----------~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~--ip~~~~--~~L~~ 121 (720)
++|.|.|.++.|.. ++++.|+|++|+++...+..|..+++|++|+|++|+++.. +|..+. .+|++
T Consensus 3 ~~C~C~~~~l~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~ 82 (306)
T 2z66_A 3 SRCSCSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKY 82 (306)
T ss_dssp TTCEEETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCE
T ss_pred CCCeeCCCEEEcCCCCcccCCCCCCCCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCE
Confidence 46777899999963 3689999999999976666689999999999999999832 233332 67888
Q ss_pred EEecCCcCCCCCcchhhcccccccccccccccCCCCC-chhcCCCCCceEeccCCcccccCCCCCCCCCCCceeeccccc
Q 004994 122 FSLSGNQLTGSIPESLSRLTQLLDLSLNNNHLNGGIP-DAFHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNNK 200 (720)
Q Consensus 122 L~Ls~N~l~g~~p~~l~~l~~L~~L~l~~N~l~g~~p-~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~ 200 (720)
|+|++|.++ .+|..+.++++|+.|+|++|++++..+ ..+..+++|++|++++|.+++..|..+.++++|+.|+|++|.
T Consensus 83 L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 161 (306)
T 2z66_A 83 LDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNS 161 (306)
T ss_dssp EECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCE
T ss_pred EECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCc
Confidence 888888888 567778888888888888888876544 567888888888888888887777778888888888888888
Q ss_pred ccc--ccccccccc-cceEEccCCcCcccCCcccCCCccccccCccCC
Q 004994 201 LSG--TLNVLEDLH-LIDLNIENNLFSGPIPEKLLSIPNFRKDGNPFN 245 (720)
Q Consensus 201 l~~--~~~~~~~~~-l~~l~l~~N~l~g~~p~~~~~l~~l~~~~n~~~ 245 (720)
+++ .+..+..+. |+.|++++|++++..|..+..+++|+..+...|
T Consensus 162 l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N 209 (306)
T 2z66_A 162 FQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHN 209 (306)
T ss_dssp EGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTS
T ss_pred cccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCC
Confidence 876 334455554 888888888888777777776666655444433
No 270
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.82 E-value=2.6e-20 Score=191.69 Aligned_cols=158 Identities=20% Similarity=0.204 Sum_probs=121.4
Q ss_pred ceeEEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCCCcc--ccCcEEEecCCcCCCCCcchhhccccccccccc
Q 004994 72 NVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSNLP--VTVRNFSLSGNQLTGSIPESLSRLTQLLDLSLN 149 (720)
Q Consensus 72 ~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~--~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~l~ 149 (720)
+|+.|+|++|++++..+..|.++++|++|+|++|++++..+..+. .+|++|+|++|++++..|..|.++++|+.|+++
T Consensus 29 ~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~ 108 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred CccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECC
Confidence 588888888888887777888888888888888888865555565 678888888888887777788888888888888
Q ss_pred ccccCCCCCchhcCCCCCceEeccCCcccc-cCCCCCCCCCCCceeeccccccccccc-cccccc-cc----eEEccCCc
Q 004994 150 NNHLNGGIPDAFHQFTGLINFDLSANNLTG-QLPPSTRNLSSLYSLHLQNNKLSGTLN-VLEDLH-LI----DLNIENNL 222 (720)
Q Consensus 150 ~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g-~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~~-l~----~l~l~~N~ 222 (720)
+|++++..+..+.++++|++|+|++|++++ .+|..+.++++|+.|+|++|++++.++ .+..+. ++ .|++++|.
T Consensus 109 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~ 188 (276)
T 2z62_A 109 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNP 188 (276)
T ss_dssp TSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSC
T ss_pred CCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCc
Confidence 888887666678888888888888888875 368888888888888888888877653 232221 32 67777777
Q ss_pred CcccCCc
Q 004994 223 FSGPIPE 229 (720)
Q Consensus 223 l~g~~p~ 229 (720)
+++..+.
T Consensus 189 l~~~~~~ 195 (276)
T 2z62_A 189 MNFIQPG 195 (276)
T ss_dssp CCEECTT
T ss_pred ccccCcc
Confidence 7754443
No 271
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.82 E-value=5.8e-20 Score=218.76 Aligned_cols=91 Identities=23% Similarity=0.246 Sum_probs=73.5
Q ss_pred hhcCCCCCceEeccCCcccccCCCCCCCCCCCceeeccccccccccccccccccceEEccCCcCcccCCcccCCCccccc
Q 004994 160 AFHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNNKLSGTLNVLEDLHLIDLNIENNLFSGPIPEKLLSIPNFRK 239 (720)
Q Consensus 160 ~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~l~l~~N~l~g~~p~~~~~l~~l~~ 239 (720)
.|.++++|+.|+|++|+|++..|..+.++++|+.|+|++|+|++.++......|+.|+|++|+|++.+|..+.++..|.+
T Consensus 475 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~L~~l~l 554 (844)
T 3j0a_A 475 VFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLPANLEILDISRNQLLAPNPDVFVSLSVLDI 554 (844)
T ss_dssp CSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCCSCCCEEEEEEECCCCCCSCCCSSCCEEEE
T ss_pred hhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhhccccEEECCCCcCCCCChhHhCCcCEEEe
Confidence 35566777777777777777677778888888888888888887775443456899999999999999999999999999
Q ss_pred cCccCCCcccC
Q 004994 240 DGNPFNTTVIA 250 (720)
Q Consensus 240 ~~n~~~~~~~~ 250 (720)
.+|+|.|.|..
T Consensus 555 ~~Np~~C~c~~ 565 (844)
T 3j0a_A 555 THNKFICECEL 565 (844)
T ss_dssp EEECCCCSSSC
T ss_pred cCCCccccccc
Confidence 99999997753
No 272
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.81 E-value=1.1e-19 Score=200.74 Aligned_cols=185 Identities=21% Similarity=0.224 Sum_probs=146.2
Q ss_pred CCceeEeec-----------CceeEEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCCCcc--ccCcEEEecCCc
Q 004994 62 SWQGVFCVF-----------SNVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSNLP--VTVRNFSLSGNQ 128 (720)
Q Consensus 62 ~w~gv~c~~-----------~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~--~~L~~L~Ls~N~ 128 (720)
.|..+.|.. ++++.|+|++|+|++..+..|.++++|+.|+|++|+|++..|..+. .+|++|+|++|+
T Consensus 55 ~~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~ 134 (452)
T 3zyi_A 55 QFSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNW 134 (452)
T ss_dssp SSCEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred CCcEEEECCCCcCccCCCCCCCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCc
Confidence 367788853 3689999999999999999999999999999999999977777776 789999999999
Q ss_pred CCCCCcchhhcccccccccccccccCCCCCchhcCCCCCceEeccCCcccccCC-CCCCCCCCCceeecccccccccccc
Q 004994 129 LTGSIPESLSRLTQLLDLSLNNNHLNGGIPDAFHQFTGLINFDLSANNLTGQLP-PSTRNLSSLYSLHLQNNKLSGTLNV 207 (720)
Q Consensus 129 l~g~~p~~l~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p-~~~~~l~~L~~L~l~~N~l~~~~~~ 207 (720)
|++..+..|.++++|++|+|++|+|++..+..|.++++|+.|+|++|+..+.+| ..+.++++|+.|+|++|+|++.+..
T Consensus 135 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~ 214 (452)
T 3zyi_A 135 LTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDMPNL 214 (452)
T ss_dssp CSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSCCCC
T ss_pred CCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccccccc
Confidence 997777779999999999999999997666678888888888888843333444 4577888888888888888776432
Q ss_pred ccccccceEEccCCcCcccCCcccCCCccccccCccCCC
Q 004994 208 LEDLHLIDLNIENNLFSGPIPEKLLSIPNFRKDGNPFNT 246 (720)
Q Consensus 208 ~~~~~l~~l~l~~N~l~g~~p~~~~~l~~l~~~~n~~~~ 246 (720)
.....|+.|+|++|+|++..|..|..+++|+..+...|.
T Consensus 215 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~ 253 (452)
T 3zyi_A 215 TPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQ 253 (452)
T ss_dssp TTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSC
T ss_pred cccccccEEECcCCcCcccCcccccCccCCCEEEeCCCc
Confidence 222347788888888887777777766666655444443
No 273
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.81 E-value=3.3e-20 Score=190.44 Aligned_cols=172 Identities=23% Similarity=0.286 Sum_probs=146.9
Q ss_pred EeecCceeEEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCCCcc--ccCcEEEecCCcCCCCCcchhhcccccc
Q 004994 67 FCVFSNVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSNLP--VTVRNFSLSGNQLTGSIPESLSRLTQLL 144 (720)
Q Consensus 67 ~c~~~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~--~~L~~L~Ls~N~l~g~~p~~l~~l~~L~ 144 (720)
+..+++|+.|+|++|++++. +.+..+++|++|+|++|+|++..|..+. .+|++|+|++|++++..|..|.++++|+
T Consensus 59 l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 136 (272)
T 3rfs_A 59 IQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLT 136 (272)
T ss_dssp GGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCC
T ss_pred cccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCC
Confidence 45678999999999999974 4899999999999999999966665554 7899999999999988888899999999
Q ss_pred cccccccccCCCCCchhcCCCCCceEeccCCcccccCCCCCCCCCCCceeecccccccccccc-ccccc-cceEEccCCc
Q 004994 145 DLSLNNNHLNGGIPDAFHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNNKLSGTLNV-LEDLH-LIDLNIENNL 222 (720)
Q Consensus 145 ~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~-l~~l~l~~N~ 222 (720)
.|+|++|+|++..|..|.++++|+.|+|++|+|++..+..+..+++|+.|+|++|+|++.++. +..+. |+.|++++|.
T Consensus 137 ~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 216 (272)
T 3rfs_A 137 YLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNP 216 (272)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCC
Confidence 999999999987777789999999999999999977777789999999999999999998764 45554 9999999999
Q ss_pred CcccCCcccCCCccccccCccC
Q 004994 223 FSGPIPEKLLSIPNFRKDGNPF 244 (720)
Q Consensus 223 l~g~~p~~~~~l~~l~~~~n~~ 244 (720)
+.+..| ++..+....|.+
T Consensus 217 ~~~~~~----~l~~l~~~~n~~ 234 (272)
T 3rfs_A 217 WDCTCP----GIRYLSEWINKH 234 (272)
T ss_dssp BCCCTT----TTHHHHHHHHHT
T ss_pred ccccCc----HHHHHHHHHHhC
Confidence 998766 234444444443
No 274
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.81 E-value=1.6e-19 Score=198.87 Aligned_cols=184 Identities=21% Similarity=0.234 Sum_probs=140.1
Q ss_pred CCceeEeec-----------CceeEEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCCCcc--ccCcEEEecCCc
Q 004994 62 SWQGVFCVF-----------SNVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSNLP--VTVRNFSLSGNQ 128 (720)
Q Consensus 62 ~w~gv~c~~-----------~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~--~~L~~L~Ls~N~ 128 (720)
.|..+.|.. .+++.|+|++|++++..+..|.++++|++|+|++|+|++..|..+. .+|++|+|++|+
T Consensus 44 ~~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~ 123 (440)
T 3zyj_A 44 QFSKVICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNR 123 (440)
T ss_dssp TSCEEECCSCCCSSCCSCCCTTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSC
T ss_pred CCCEEEeCCCCcCcCCCCCCCCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCc
Confidence 466778853 4578899999999988888999999999999999999866666665 789999999999
Q ss_pred CCCCCcchhhcccccccccccccccCCCCCchhcCCCCCceEeccCCcccccCC-CCCCCCCCCceeecccccccccccc
Q 004994 129 LTGSIPESLSRLTQLLDLSLNNNHLNGGIPDAFHQFTGLINFDLSANNLTGQLP-PSTRNLSSLYSLHLQNNKLSGTLNV 207 (720)
Q Consensus 129 l~g~~p~~l~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p-~~~~~l~~L~~L~l~~N~l~~~~~~ 207 (720)
|++..+..|.++++|+.|+|++|+|++..+..|.++++|+.|+|++|+..+.++ ..|.++++|+.|+|++|+|+..+..
T Consensus 124 l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~ 203 (440)
T 3zyj_A 124 LTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNL 203 (440)
T ss_dssp CSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSSCCCC
T ss_pred CCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCcccccc
Confidence 996666678899999999999999987666678888888888888844333444 4677888888888888888765432
Q ss_pred ccccccceEEccCCcCcccCCcccCCCccccccCccCC
Q 004994 208 LEDLHLIDLNIENNLFSGPIPEKLLSIPNFRKDGNPFN 245 (720)
Q Consensus 208 ~~~~~l~~l~l~~N~l~g~~p~~~~~l~~l~~~~n~~~ 245 (720)
.....|+.|+|++|+|++..|..|..+++|+..+...|
T Consensus 204 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n 241 (440)
T 3zyj_A 204 TPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQS 241 (440)
T ss_dssp TTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTC
T ss_pred CCCcccCEEECCCCccCccChhhhccCccCCEEECCCC
Confidence 22234778888888887777777776666655444443
No 275
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.81 E-value=5.3e-20 Score=192.34 Aligned_cols=180 Identities=19% Similarity=0.229 Sum_probs=107.9
Q ss_pred eeEeecCceeEEEecCCcccc--cCCcCcCCCCCccEEeccCCcccccCCCCcc--ccCcEEEecCCcCCCCCc-chhhc
Q 004994 65 GVFCVFSNVTEIRLTGMNLGG--VLADTLGDLESVINIDLSNNHIGGSIPSNLP--VTVRNFSLSGNQLTGSIP-ESLSR 139 (720)
Q Consensus 65 gv~c~~~~l~~l~L~~n~l~~--~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~--~~L~~L~Ls~N~l~g~~p-~~l~~ 139 (720)
+++..+++|+.|+|++|+++. ..+..+..+++|++|+|++|++. .+|..+. .+|+.|+|++|++++..+ ..+.+
T Consensus 46 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~ 124 (306)
T 2z66_A 46 GVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLS 124 (306)
T ss_dssp TTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTT
T ss_pred hHhhccccCCEEECCCCccCcccCcccccccccccCEEECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhh
Confidence 344556667777777777662 23455556666666666666666 4554443 566666666666664433 45666
Q ss_pred ccccccccccccccCCCCCchhcCCCCCceEeccCCcccc-cCCCCCCCCCCCceeeccccccccccc-cccccc-cceE
Q 004994 140 LTQLLDLSLNNNHLNGGIPDAFHQFTGLINFDLSANNLTG-QLPPSTRNLSSLYSLHLQNNKLSGTLN-VLEDLH-LIDL 216 (720)
Q Consensus 140 l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g-~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~~-l~~l 216 (720)
+++|+.|+|++|.+++..|..|.++++|+.|+|++|.+++ .+|..+..+++|+.|+|++|++++.++ .+..+. |+.|
T Consensus 125 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 204 (306)
T 2z66_A 125 LRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVL 204 (306)
T ss_dssp CTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred ccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEE
Confidence 6666666666666666666666666666666666666664 456666666666666666666666542 333333 6666
Q ss_pred EccCCcCcccCCcccCCCccccccCccCC
Q 004994 217 NIENNLFSGPIPEKLLSIPNFRKDGNPFN 245 (720)
Q Consensus 217 ~l~~N~l~g~~p~~~~~l~~l~~~~n~~~ 245 (720)
+|++|++++..+..+..+++|+..+...|
T Consensus 205 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 233 (306)
T 2z66_A 205 NMSHNNFFSLDTFPYKCLNSLQVLDYSLN 233 (306)
T ss_dssp ECTTSCCSBCCSGGGTTCTTCCEEECTTS
T ss_pred ECCCCccCccChhhccCcccCCEeECCCC
Confidence 66666666555545555555444444433
No 276
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.81 E-value=1.1e-19 Score=187.01 Aligned_cols=183 Identities=17% Similarity=0.259 Sum_probs=155.2
Q ss_pred eEeecCceeEEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCCCcc--ccCcEEEecCCcCCCCCcchhhccccc
Q 004994 66 VFCVFSNVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSNLP--VTVRNFSLSGNQLTGSIPESLSRLTQL 143 (720)
Q Consensus 66 v~c~~~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~--~~L~~L~Ls~N~l~g~~p~~l~~l~~L 143 (720)
.+..+++|+.|+|++|++++..+..|..+++|++|+|++|++++..|..+. .+|++|+|++|++++..+..+.++++|
T Consensus 47 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 126 (276)
T 2z62_A 47 SFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTL 126 (276)
T ss_dssp TTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTC
T ss_pred HhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCC
Confidence 445678999999999999988888999999999999999999977777776 799999999999998777789999999
Q ss_pred ccccccccccCCC-CCchhcCCCCCceEeccCCcccccCCCCCCCCCCCc----eeecccccccccccc-ccccccceEE
Q 004994 144 LDLSLNNNHLNGG-IPDAFHQFTGLINFDLSANNLTGQLPPSTRNLSSLY----SLHLQNNKLSGTLNV-LEDLHLIDLN 217 (720)
Q Consensus 144 ~~L~l~~N~l~g~-~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~----~L~l~~N~l~~~~~~-~~~~~l~~l~ 217 (720)
+.|+|++|++++. +|..|.++++|+.|+|++|++++..+..+..+.+|+ .|+|++|.+++.++. +....|+.|+
T Consensus 127 ~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~~~~L~~L~ 206 (276)
T 2z62_A 127 KELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLKELA 206 (276)
T ss_dssp CEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSCSCCEEEEE
T ss_pred CEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCcccccCccccCCCcccEEE
Confidence 9999999999873 699999999999999999999977777888777777 899999999988754 4445799999
Q ss_pred ccCCcCcccCCcccCCCcc---ccccCccCCCcc
Q 004994 218 IENNLFSGPIPEKLLSIPN---FRKDGNPFNTTV 248 (720)
Q Consensus 218 l~~N~l~g~~p~~~~~l~~---l~~~~n~~~~~~ 248 (720)
+++|++++..+..+..+++ |.+.+|++.|.|
T Consensus 207 L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c 240 (276)
T 2z62_A 207 LDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 240 (276)
T ss_dssp CCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCT
T ss_pred CCCCceeecCHhHhcccccccEEEccCCcccccC
Confidence 9999999666655555554 556777776543
No 277
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.80 E-value=3.3e-19 Score=182.94 Aligned_cols=173 Identities=23% Similarity=0.317 Sum_probs=148.8
Q ss_pred ecCceeEEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCCCcc--ccCcEEEecCCcCCCCCcchhhcccccccc
Q 004994 69 VFSNVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSNLP--VTVRNFSLSGNQLTGSIPESLSRLTQLLDL 146 (720)
Q Consensus 69 ~~~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~--~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L 146 (720)
.+.+|+.|++++|.++.. +.+..+++|++|+|++|++++ ++ .+. .+|++|+|++|++++..|..|.++++|++|
T Consensus 39 ~l~~L~~L~l~~~~i~~~--~~l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 114 (272)
T 3rfs_A 39 ELNSIDQIIANNSDIKSV--QGIQYLPNVRYLALGGNKLHD-IS-ALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKEL 114 (272)
T ss_dssp HHTTCCEEECTTSCCCCC--TTGGGCTTCCEEECTTSCCCC-CG-GGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEE
T ss_pred cccceeeeeeCCCCcccc--cccccCCCCcEEECCCCCCCC-ch-hhcCCCCCCEEECCCCccCccChhHhcCCcCCCEE
Confidence 467899999999999853 468999999999999999995 44 444 789999999999998888889999999999
Q ss_pred cccccccCCCCCchhcCCCCCceEeccCCcccccCCCCCCCCCCCceeecccccccccccc-cccc-ccceEEccCCcCc
Q 004994 147 SLNNNHLNGGIPDAFHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNNKLSGTLNV-LEDL-HLIDLNIENNLFS 224 (720)
Q Consensus 147 ~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~-~l~~l~l~~N~l~ 224 (720)
+|++|++++..|..|.++++|++|+|++|+|++..+..+..+++|+.|+|++|+|++.++. +..+ .|+.|++++|+++
T Consensus 115 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 194 (272)
T 3rfs_A 115 VLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLK 194 (272)
T ss_dssp ECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCS
T ss_pred ECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCC
Confidence 9999999988888899999999999999999977777789999999999999999988764 4555 4999999999999
Q ss_pred ccCCcccCCCcccc---ccCccCC
Q 004994 225 GPIPEKLLSIPNFR---KDGNPFN 245 (720)
Q Consensus 225 g~~p~~~~~l~~l~---~~~n~~~ 245 (720)
+..|..+..+++|+ +.+|++.
T Consensus 195 ~~~~~~~~~l~~L~~L~l~~N~~~ 218 (272)
T 3rfs_A 195 SVPDGVFDRLTSLQYIWLHDNPWD 218 (272)
T ss_dssp CCCTTTTTTCTTCCEEECCSSCBC
T ss_pred ccCHHHHhCCcCCCEEEccCCCcc
Confidence 88887776666655 4556554
No 278
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.80 E-value=4.3e-20 Score=212.70 Aligned_cols=180 Identities=15% Similarity=0.229 Sum_probs=159.3
Q ss_pred EeecCceeEEEecCCccccc-----------------CCcCcC--CCCCccEEeccCCcccccCCCCcc--ccCcEEEec
Q 004994 67 FCVFSNVTEIRLTGMNLGGV-----------------LADTLG--DLESVINIDLSNNHIGGSIPSNLP--VTVRNFSLS 125 (720)
Q Consensus 67 ~c~~~~l~~l~L~~n~l~~~-----------------~~~~~~--~l~~L~~L~L~~N~l~g~ip~~~~--~~L~~L~Ls 125 (720)
+..+++|+.|+|++|+|+|. +|+.++ ++++|++|+|++|++.|.+|..+. .+|+.|+|+
T Consensus 202 l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls 281 (636)
T 4eco_A 202 VMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVA 281 (636)
T ss_dssp GGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECT
T ss_pred HhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECc
Confidence 44578999999999999996 999999 999999999999999999999987 799999999
Q ss_pred CCc-CCC-CCcchhhcc------cccccccccccccCCCCCc--hhcCCCCCceEeccCCcccccCCCCCCCCCCCceee
Q 004994 126 GNQ-LTG-SIPESLSRL------TQLLDLSLNNNHLNGGIPD--AFHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLH 195 (720)
Q Consensus 126 ~N~-l~g-~~p~~l~~l------~~L~~L~l~~N~l~g~~p~--~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ 195 (720)
+|+ ++| .+|..++++ ++|+.|+|++|+++ .+|. .|+++++|+.|+|++|+++|.+| .+.++++|+.|+
T Consensus 282 ~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~ 359 (636)
T 4eco_A 282 CNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLN 359 (636)
T ss_dssp TCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEE
T ss_pred CCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEE
Confidence 999 999 899999987 99999999999999 8998 99999999999999999999999 999999999999
Q ss_pred cccccccccccccccc-c-cceEEccCCcCcccCCcccCCCc--cccccCccCCCccc
Q 004994 196 LQNNKLSGTLNVLEDL-H-LIDLNIENNLFSGPIPEKLLSIP--NFRKDGNPFNTTVI 249 (720)
Q Consensus 196 l~~N~l~~~~~~~~~~-~-l~~l~l~~N~l~g~~p~~~~~l~--~l~~~~n~~~~~~~ 249 (720)
|++|+++..+..+..+ . |+.|++++|+++ .+|..+..+. +|+..+...|...+
T Consensus 360 L~~N~l~~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~ 416 (636)
T 4eco_A 360 LAYNQITEIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGS 416 (636)
T ss_dssp CCSSEEEECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTT
T ss_pred CCCCccccccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCC
Confidence 9999999666556554 5 999999999999 8998876543 55555554444433
No 279
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.80 E-value=1.5e-19 Score=198.96 Aligned_cols=179 Identities=17% Similarity=0.208 Sum_probs=129.6
Q ss_pred eeEeecCceeEEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCCCcc--ccCcEEEecCCcCCCCCcchhhcccc
Q 004994 65 GVFCVFSNVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSNLP--VTVRNFSLSGNQLTGSIPESLSRLTQ 142 (720)
Q Consensus 65 gv~c~~~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~--~~L~~L~Ls~N~l~g~~p~~l~~l~~ 142 (720)
..+..+++|+.|+|++|+|++..+..|.++++|++|+|++|+|++..+..+. .+|+.|+|++|+|++..+..|.++++
T Consensus 82 ~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~ 161 (440)
T 3zyj_A 82 NSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPS 161 (440)
T ss_dssp TTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTT
T ss_pred HHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcc
Confidence 4456678899999999999988888999999999999999999944444454 78999999999998766667888888
Q ss_pred cccccccccccCCCC-CchhcCCCCCceEeccCCcccccCCCCCCCCCCCceeeccccccccccc-cccccc-cceEEcc
Q 004994 143 LLDLSLNNNHLNGGI-PDAFHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNNKLSGTLN-VLEDLH-LIDLNIE 219 (720)
Q Consensus 143 L~~L~l~~N~l~g~~-p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~~-l~~l~l~ 219 (720)
|+.|+|++|+..+.+ +..|.++++|+.|+|++|+|+ .+| .+..+++|+.|+|++|+|++..+ .+..+. |+.|+|+
T Consensus 162 L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 239 (440)
T 3zyj_A 162 LRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMI 239 (440)
T ss_dssp CCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECT
T ss_pred cCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-ccc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECC
Confidence 888888874433334 345777777777777777776 555 36777777777777777776643 344443 6777777
Q ss_pred CCcCcccCCcccCCCccccccCccCC
Q 004994 220 NNLFSGPIPEKLLSIPNFRKDGNPFN 245 (720)
Q Consensus 220 ~N~l~g~~p~~~~~l~~l~~~~n~~~ 245 (720)
+|++++..|..|..+++|+..+...|
T Consensus 240 ~n~l~~~~~~~~~~l~~L~~L~L~~N 265 (440)
T 3zyj_A 240 QSQIQVIERNAFDNLQSLVEINLAHN 265 (440)
T ss_dssp TCCCCEECTTSSTTCTTCCEEECTTS
T ss_pred CCceeEEChhhhcCCCCCCEEECCCC
Confidence 77777666666666655555444444
No 280
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.80 E-value=1.5e-19 Score=201.15 Aligned_cols=184 Identities=17% Similarity=0.210 Sum_probs=162.8
Q ss_pred CCceeEeec-----------CceeEEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCCCcc--ccCcEEEecCCc
Q 004994 62 SWQGVFCVF-----------SNVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSNLP--VTVRNFSLSGNQ 128 (720)
Q Consensus 62 ~w~gv~c~~-----------~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~--~~L~~L~Ls~N~ 128 (720)
.|..+.|.. .+++.|+|++|+|++..+..|..+++|++|+|++|++++..|..+. .+|++|+|++|+
T Consensus 12 ~~~~v~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~ 91 (477)
T 2id5_A 12 QDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNR 91 (477)
T ss_dssp TTTEEECCSCCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred CCCEEEeCCCCcCcCCCCCCCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCc
Confidence 467888853 3688999999999999899999999999999999999988888886 799999999999
Q ss_pred CCCCCcchhhcccccccccccccccCCCCCchhcCCCCCceEeccCCcccccCCCCCCCCCCCceeeccccccccccc-c
Q 004994 129 LTGSIPESLSRLTQLLDLSLNNNHLNGGIPDAFHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNNKLSGTLN-V 207 (720)
Q Consensus 129 l~g~~p~~l~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~-~ 207 (720)
+++..+..|.++++|+.|+|++|++++..|..|.++++|+.|+|++|.+++..|..|.++++|+.|+|++|++++.++ .
T Consensus 92 l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 171 (477)
T 2id5_A 92 LKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEA 171 (477)
T ss_dssp CCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHH
T ss_pred CCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhH
Confidence 996666678999999999999999999889999999999999999999998888999999999999999999998775 3
Q ss_pred ccccc-cceEEccCCcCcccCCcccCCCccccccCccCC
Q 004994 208 LEDLH-LIDLNIENNLFSGPIPEKLLSIPNFRKDGNPFN 245 (720)
Q Consensus 208 ~~~~~-l~~l~l~~N~l~g~~p~~~~~l~~l~~~~n~~~ 245 (720)
+..+. |+.|+|++|.+++..+..+..+++|+..+...+
T Consensus 172 l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~ 210 (477)
T 2id5_A 172 LSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHW 210 (477)
T ss_dssp HTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECC
T ss_pred hcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCC
Confidence 55554 999999999999888878887777776555443
No 281
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.80 E-value=3e-19 Score=188.92 Aligned_cols=165 Identities=23% Similarity=0.347 Sum_probs=77.3
Q ss_pred ceeEEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCCCccccCcEEEecCCcCCCCCcchhhccccccccccccc
Q 004994 72 NVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSNLPVTVRNFSLSGNQLTGSIPESLSRLTQLLDLSLNNN 151 (720)
Q Consensus 72 ~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~l~~N 151 (720)
+|+.|+|++|++++..|..|+.+++|++|+|++|+++ .+|..+..+|++|+|++|++++..+..|.++++|+.|++++|
T Consensus 79 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n 157 (332)
T 2ft3_A 79 HLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLPSSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGN 157 (332)
T ss_dssp TCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCC-SCCSSCCTTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSC
T ss_pred CCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCC-ccCccccccCCEEECCCCccCccCHhHhCCCccCCEEECCCC
Confidence 3444444444444433444444444444444444444 444444445555555555555444444566666666666666
Q ss_pred ccC--CCCCchhcCC--------------------CCCceEeccCCcccccCCCCCCCCCCCceeeccccccccccc-cc
Q 004994 152 HLN--GGIPDAFHQF--------------------TGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNNKLSGTLN-VL 208 (720)
Q Consensus 152 ~l~--g~~p~~~~~l--------------------~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~ 208 (720)
.++ +..|..|..+ ++|+.|+|++|.+++..|..+..+++|+.|+|++|++++.++ .+
T Consensus 158 ~l~~~~~~~~~~~~l~L~~L~l~~n~l~~l~~~~~~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~ 237 (332)
T 2ft3_A 158 PLENSGFEPGAFDGLKLNYLRISEAKLTGIPKDLPETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSL 237 (332)
T ss_dssp CCBGGGSCTTSSCSCCCSCCBCCSSBCSSCCSSSCSSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGG
T ss_pred ccccCCCCcccccCCccCEEECcCCCCCccCccccCCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHh
Confidence 653 2444444443 233333333344443333444445555555555555544443 23
Q ss_pred cccc-cceEEccCCcCcccCCcccCCCcccc
Q 004994 209 EDLH-LIDLNIENNLFSGPIPEKLLSIPNFR 238 (720)
Q Consensus 209 ~~~~-l~~l~l~~N~l~g~~p~~~~~l~~l~ 238 (720)
..+. |+.|++++|+++ .+|..+..+++|+
T Consensus 238 ~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~ 267 (332)
T 2ft3_A 238 SFLPTLRELHLDNNKLS-RVPAGLPDLKLLQ 267 (332)
T ss_dssp GGCTTCCEEECCSSCCC-BCCTTGGGCTTCC
T ss_pred hCCCCCCEEECCCCcCe-ecChhhhcCccCC
Confidence 3322 555555555555 4554444444433
No 282
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.80 E-value=3.6e-19 Score=188.18 Aligned_cols=195 Identities=19% Similarity=0.285 Sum_probs=153.7
Q ss_pred CCCccCCCCCCCCCCCceeEeec-----------CceeEEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCCCcc
Q 004994 48 LEKWLSFGGDPCGDSWQGVFCVF-----------SNVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSNLP 116 (720)
Q Consensus 48 ~~~w~~~~~~~c~~~w~gv~c~~-----------~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~ 116 (720)
...|...-...|.+.|..+.|.. ++++.|+|++|++++..+..|+++++|++|+|++|++++..|..+.
T Consensus 18 i~~~~~~cp~~c~c~l~~l~~~~~~l~~lp~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 97 (330)
T 1xku_A 18 IEPMGPVCPFRCQCHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFA 97 (330)
T ss_dssp ----CCCCCTTCEEETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTT
T ss_pred cccccCCCCCCCcCCCeEEEecCCCccccCccCCCCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhc
Confidence 44554333445666788888852 4688999999999988888899999999999999999977788886
Q ss_pred --ccCcEEEecCCcCCCCCcchhhcccccccccccccccCCCCCchhcCCCCCceEeccCCcccc--cCCCCCCCCCCCc
Q 004994 117 --VTVRNFSLSGNQLTGSIPESLSRLTQLLDLSLNNNHLNGGIPDAFHQFTGLINFDLSANNLTG--QLPPSTRNLSSLY 192 (720)
Q Consensus 117 --~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g--~~p~~~~~l~~L~ 192 (720)
.+|++|+|++|+++ .+|..+. ++|+.|++++|++++..+..|.++++|+.|+|++|.++. ..+..+.++++|+
T Consensus 98 ~l~~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~ 174 (330)
T 1xku_A 98 PLVKLERLYLSKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLS 174 (330)
T ss_dssp TCTTCCEEECCSSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCC
T ss_pred CCCCCCEEECCCCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcC
Confidence 68999999999998 6776665 789999999999987777778899999999999999853 6777888899999
Q ss_pred eeeccccccccccccccccccceEEccCCcCcccCCcccCCCccccccCccCCC
Q 004994 193 SLHLQNNKLSGTLNVLEDLHLIDLNIENNLFSGPIPEKLLSIPNFRKDGNPFNT 246 (720)
Q Consensus 193 ~L~l~~N~l~~~~~~~~~~~l~~l~l~~N~l~g~~p~~~~~l~~l~~~~n~~~~ 246 (720)
.|++++|.++..+..+. ..|+.|++++|++++..|..+..+++|+..+...|.
T Consensus 175 ~L~l~~n~l~~l~~~~~-~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~ 227 (330)
T 1xku_A 175 YIRIADTNITTIPQGLP-PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNS 227 (330)
T ss_dssp EEECCSSCCCSCCSSCC-TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSC
T ss_pred EEECCCCccccCCcccc-ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCc
Confidence 99999998887654433 458888999998888778888777777766555553
No 283
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.80 E-value=1.8e-19 Score=206.29 Aligned_cols=134 Identities=20% Similarity=0.229 Sum_probs=100.3
Q ss_pred CceeEEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCCCcc--ccCcEEEecCCcCCCCCcchhhcccccccccc
Q 004994 71 SNVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSNLP--VTVRNFSLSGNQLTGSIPESLSRLTQLLDLSL 148 (720)
Q Consensus 71 ~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~--~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~l 148 (720)
.+++.|++++|.+....+..|..+++|++|+|++|+|++..|..+. .+|+.|+|++|.|++..|..|+++++|++|+|
T Consensus 51 ~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 130 (597)
T 3oja_B 51 NNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVL 130 (597)
T ss_dssp CCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEe
Confidence 4567778888887766666677778888888888888766666665 67888888888888777777778888888888
Q ss_pred cccccCCCCCchhcCCCCCceEeccCCcccccCCCCCCCCCCCceeeccccccccc
Q 004994 149 NNNHLNGGIPDAFHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNNKLSGT 204 (720)
Q Consensus 149 ~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~ 204 (720)
++|.|++..+..|+++++|+.|+|++|.|++..|..|.++++|+.|+|++|.|++.
T Consensus 131 ~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 186 (597)
T 3oja_B 131 ERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV 186 (597)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBC
T ss_pred eCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCc
Confidence 88888754455567788888888888888777777777788888888877777653
No 284
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.80 E-value=2.2e-19 Score=180.59 Aligned_cols=174 Identities=15% Similarity=0.159 Sum_probs=147.1
Q ss_pred CceeEEEecCCcccccCCcCcCCCCCccEEeccCCc-ccccCCCCcc--ccCcEEEecC-CcCCCCCcchhhcccccccc
Q 004994 71 SNVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNH-IGGSIPSNLP--VTVRNFSLSG-NQLTGSIPESLSRLTQLLDL 146 (720)
Q Consensus 71 ~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~-l~g~ip~~~~--~~L~~L~Ls~-N~l~g~~p~~l~~l~~L~~L 146 (720)
.+++.|+|++|++++..+..|..+++|++|+|++|+ +++..+..+. .+|+.|+|++ |++++..+..|.++++|+.|
T Consensus 31 ~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L 110 (239)
T 2xwt_C 31 PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFL 110 (239)
T ss_dssp TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEE
T ss_pred CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEE
Confidence 579999999999999888899999999999999997 8844444665 7999999999 99997777889999999999
Q ss_pred cccccccCCCCCchhcCCCCCc---eEeccCC-cccccCCCCCCCCCCCc-eeecccccccccccc-ccccccceEEccC
Q 004994 147 SLNNNHLNGGIPDAFHQFTGLI---NFDLSAN-NLTGQLPPSTRNLSSLY-SLHLQNNKLSGTLNV-LEDLHLIDLNIEN 220 (720)
Q Consensus 147 ~l~~N~l~g~~p~~~~~l~~L~---~L~ls~N-~l~g~~p~~~~~l~~L~-~L~l~~N~l~~~~~~-~~~~~l~~l~l~~ 220 (720)
+|++|++++ +|. |..+++|+ .|++++| ++++..+..|.++++|+ .|+|++|+++..+.. +....|+.|++++
T Consensus 111 ~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~~~L~~L~L~~ 188 (239)
T 2xwt_C 111 GIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNGTKLDAVYLNK 188 (239)
T ss_dssp EEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTTCEEEEEECTT
T ss_pred eCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCCCCCCEEEcCC
Confidence 999999996 776 88999998 9999999 99966667799999999 999999999966543 3445699999999
Q ss_pred Cc-CcccCCcccCCC-ccccccCccCCC
Q 004994 221 NL-FSGPIPEKLLSI-PNFRKDGNPFNT 246 (720)
Q Consensus 221 N~-l~g~~p~~~~~l-~~l~~~~n~~~~ 246 (720)
|+ +++..+..|..+ ++|+..+...|.
T Consensus 189 n~~l~~i~~~~~~~l~~~L~~L~l~~N~ 216 (239)
T 2xwt_C 189 NKYLTVIDKDAFGGVYSGPSLLDVSQTS 216 (239)
T ss_dssp CTTCCEECTTTTTTCSBCCSEEECTTCC
T ss_pred CCCcccCCHHHhhccccCCcEEECCCCc
Confidence 95 996666777777 776655554443
No 285
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.80 E-value=5.5e-19 Score=186.72 Aligned_cols=177 Identities=23% Similarity=0.328 Sum_probs=143.1
Q ss_pred ceeEeecCceeEEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCCCccccCcEEEecCCcCCCCCcchhhccccc
Q 004994 64 QGVFCVFSNVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSNLPVTVRNFSLSGNQLTGSIPESLSRLTQL 143 (720)
Q Consensus 64 ~gv~c~~~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~~~L~~L~Ls~N~l~g~~p~~l~~l~~L 143 (720)
.+.+..+++|+.|+|++|++++..|..|+.+++|++|+|++|+|+ .+|..+..+|+.|+|++|++++..+..|.++++|
T Consensus 69 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L 147 (330)
T 1xku_A 69 DGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMPKTLQELRVHENEITKVRKSVFNGLNQM 147 (330)
T ss_dssp TTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSCCTTCCEEECCSSCCCBBCHHHHTTCTTC
T ss_pred hhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCC-ccChhhcccccEEECCCCcccccCHhHhcCCccc
Confidence 345667899999999999999988999999999999999999999 8998888999999999999998888889999999
Q ss_pred ccccccccccCC--CCCchhcCCCCCceEeccCCcccccCCCCCCCCCCCceeecccccccccc-ccccccc-cceEEcc
Q 004994 144 LDLSLNNNHLNG--GIPDAFHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNNKLSGTL-NVLEDLH-LIDLNIE 219 (720)
Q Consensus 144 ~~L~l~~N~l~g--~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~-~~~~~~~-l~~l~l~ 219 (720)
+.|+|++|.+.. ..+..|.++++|+.|++++|.++ .+|..+. ++|+.|+|++|++++.. ..+..+. |+.|+++
T Consensus 148 ~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls 224 (330)
T 1xku_A 148 IVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLS 224 (330)
T ss_dssp CEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC-SCCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECC
T ss_pred cEEECCCCcCCccCcChhhccCCCCcCEEECCCCccc-cCCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECC
Confidence 999999999963 67888999999999888888887 5666554 67778888888777764 3444443 7777777
Q ss_pred CCcCcccCCcccCCCccccccCccC
Q 004994 220 NNLFSGPIPEKLLSIPNFRKDGNPF 244 (720)
Q Consensus 220 ~N~l~g~~p~~~~~l~~l~~~~n~~ 244 (720)
+|.+++..|..+..+++|+..+...
T Consensus 225 ~n~l~~~~~~~~~~l~~L~~L~L~~ 249 (330)
T 1xku_A 225 FNSISAVDNGSLANTPHLRELHLNN 249 (330)
T ss_dssp SSCCCEECTTTGGGSTTCCEEECCS
T ss_pred CCcCceeChhhccCCCCCCEEECCC
Confidence 7777766666665555554443333
No 286
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.79 E-value=1.9e-19 Score=199.13 Aligned_cols=108 Identities=20% Similarity=0.264 Sum_probs=88.5
Q ss_pred cccccccccccccCCCCCchhcCCCCCceEeccCCcccccCCCCCCCCCCCceeeccccccccccc-cccccc-cceEEc
Q 004994 141 TQLLDLSLNNNHLNGGIPDAFHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNNKLSGTLN-VLEDLH-LIDLNI 218 (720)
Q Consensus 141 ~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~~-l~~l~l 218 (720)
++|+.|+|++|++++.+|..|.++++|+.|+|++|++++..|..+.++++|+.|+|++|++++.++ .+..+. |+.|+|
T Consensus 275 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 354 (455)
T 3v47_A 275 SGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDL 354 (455)
T ss_dssp SCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEEC
T ss_pred cCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEEC
Confidence 356666677777777788899999999999999999998888899999999999999999988764 455554 999999
Q ss_pred cCCcCcccCCcccCCCccccccCccCCCcc
Q 004994 219 ENNLFSGPIPEKLLSIPNFRKDGNPFNTTV 248 (720)
Q Consensus 219 ~~N~l~g~~p~~~~~l~~l~~~~n~~~~~~ 248 (720)
++|++++..|..+..+++|+..+...|...
T Consensus 355 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 384 (455)
T 3v47_A 355 SYNHIRALGDQSFLGLPNLKELALDTNQLK 384 (455)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCS
T ss_pred CCCcccccChhhccccccccEEECCCCccc
Confidence 999999888988888877776655555443
No 287
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.79 E-value=5.3e-19 Score=176.44 Aligned_cols=157 Identities=23% Similarity=0.274 Sum_probs=93.0
Q ss_pred CCCCCCCCCceeEeecCceeEEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCCCcc--ccCcEEEecCCcCCCC
Q 004994 55 GGDPCGDSWQGVFCVFSNVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSNLP--VTVRNFSLSGNQLTGS 132 (720)
Q Consensus 55 ~~~~c~~~w~gv~c~~~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~--~~L~~L~Ls~N~l~g~ 132 (720)
+.+.| +|.++.|.. ++++ .+|..+. ++|++|+|++|+|++..|..+. .+|+.|+|++|+|++.
T Consensus 15 ~~~~C--s~~~v~c~~----------~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i 79 (229)
T 3e6j_A 15 SQCSC--SGTTVDCRS----------KRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGAL 79 (229)
T ss_dssp TTCEE--ETTEEECTT----------SCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCC
T ss_pred CCCEE--eCCEeEccC----------CCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCc
Confidence 45666 899988853 3333 2333332 5566666666666655555553 4566666666666544
Q ss_pred CcchhhcccccccccccccccCCCCCchhcCCCCCceEeccCCcccccCCCCCCCCCCCceeeccccccccccc-ccccc
Q 004994 133 IPESLSRLTQLLDLSLNNNHLNGGIPDAFHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNNKLSGTLN-VLEDL 211 (720)
Q Consensus 133 ~p~~l~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~ 211 (720)
.+..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|+|++.++ .+..+
T Consensus 80 ~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 158 (229)
T 3e6j_A 80 PVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRL 158 (229)
T ss_dssp CTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTC
T ss_pred ChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCC
Confidence 4444566666666666666666554555566666666666666666 566666666666666666666665553 23333
Q ss_pred c-cceEEccCCcCcccC
Q 004994 212 H-LIDLNIENNLFSGPI 227 (720)
Q Consensus 212 ~-l~~l~l~~N~l~g~~ 227 (720)
. |+.|+|++|.+++..
T Consensus 159 ~~L~~L~l~~N~~~c~c 175 (229)
T 3e6j_A 159 SSLTHAYLFGNPWDCEC 175 (229)
T ss_dssp TTCCEEECTTSCBCTTB
T ss_pred CCCCEEEeeCCCccCCc
Confidence 3 666666666666443
No 288
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.79 E-value=7.9e-20 Score=191.59 Aligned_cols=173 Identities=17% Similarity=0.184 Sum_probs=131.7
Q ss_pred cCceeEEEecCCcccccCCcCc--CCCCCccEEeccCCcccccCCCCcc-------ccCcEEEecCCcCCCCCcchhhcc
Q 004994 70 FSNVTEIRLTGMNLGGVLADTL--GDLESVINIDLSNNHIGGSIPSNLP-------VTVRNFSLSGNQLTGSIPESLSRL 140 (720)
Q Consensus 70 ~~~l~~l~L~~n~l~~~~~~~~--~~l~~L~~L~L~~N~l~g~ip~~~~-------~~L~~L~Ls~N~l~g~~p~~l~~l 140 (720)
+++|+.|+|++|++++.+|..+ +.+++|++|+|++|+|++. |..+. .+|++|+|++|++++..|..|+++
T Consensus 94 l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l 172 (312)
T 1wwl_A 94 ISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVF 172 (312)
T ss_dssp TSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCC
T ss_pred cCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccC
Confidence 6788999999999998888876 8889999999999999865 66543 678999999999988777888899
Q ss_pred cccccccccccccCCC--CCchh--cCCCCCceEeccCCcccc--cCC-CCCCCCCCCceeeccccccccccc--ccccc
Q 004994 141 TQLLDLSLNNNHLNGG--IPDAF--HQFTGLINFDLSANNLTG--QLP-PSTRNLSSLYSLHLQNNKLSGTLN--VLEDL 211 (720)
Q Consensus 141 ~~L~~L~l~~N~l~g~--~p~~~--~~l~~L~~L~ls~N~l~g--~~p-~~~~~l~~L~~L~l~~N~l~~~~~--~~~~~ 211 (720)
++|+.|+|++|++.+. +|..+ .++++|++|+|++|+|++ .++ ..+.++++|+.|+|++|+|++.++ .+..+
T Consensus 173 ~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l 252 (312)
T 1wwl_A 173 PALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWP 252 (312)
T ss_dssp SSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCC
T ss_pred CCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhc
Confidence 9999999999988765 34444 788888888888888873 222 234567888888888888888663 33333
Q ss_pred -ccceEEccCCcCcccCCcccC-CCccccccCccC
Q 004994 212 -HLIDLNIENNLFSGPIPEKLL-SIPNFRKDGNPF 244 (720)
Q Consensus 212 -~l~~l~l~~N~l~g~~p~~~~-~l~~l~~~~n~~ 244 (720)
.|+.|+|++|+|+ .+|..+. ++..|.+.+|..
T Consensus 253 ~~L~~L~Ls~N~l~-~ip~~~~~~L~~L~Ls~N~l 286 (312)
T 1wwl_A 253 SQLNSLNLSFTGLK-QVPKGLPAKLSVLDLSYNRL 286 (312)
T ss_dssp TTCCEEECTTSCCS-SCCSSCCSEEEEEECCSSCC
T ss_pred CCCCEEECCCCccC-hhhhhccCCceEEECCCCCC
Confidence 4888888888888 7787765 334444444444
No 289
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.79 E-value=1e-19 Score=204.49 Aligned_cols=161 Identities=28% Similarity=0.461 Sum_probs=118.7
Q ss_pred CCCccCCCCCCCCC---CCcee-EeecCceeEEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCCCccccCcEEE
Q 004994 48 LEKWLSFGGDPCGD---SWQGV-FCVFSNVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSNLPVTVRNFS 123 (720)
Q Consensus 48 ~~~w~~~~~~~c~~---~w~gv-~c~~~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~~~L~~L~ 123 (720)
+.+|.. +.+||.. .|.|+ .|..++|+.|+|++|+|++ +|..+. ++|+.|+|++|+|+ .+| .+..+|+.|+
T Consensus 33 l~~W~~-~~~~~~~~~~~~~~l~~C~~~~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip-~~l~~L~~L~ 106 (571)
T 3cvr_A 33 WDKWEK-QALPGENRNEAVSLLKECLINQFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP-ELPASLEYLD 106 (571)
T ss_dssp HHHHHT-TCCTTCCHHHHHHHHHHHHHTTCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC-CCCTTCCEEE
T ss_pred HHHHhc-cCCccccccchhhhccccccCCccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc-cccCCCCEEE
Confidence 446754 6778854 59999 7888899999999999997 676553 78888888888888 788 5567888888
Q ss_pred ecCCcCCCCCcchhhcccccccccccccccCCCCCchhcCCCCCceEeccCCcccccCCCCCCCCCCCceeecccccccc
Q 004994 124 LSGNQLTGSIPESLSRLTQLLDLSLNNNHLNGGIPDAFHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNNKLSG 203 (720)
Q Consensus 124 Ls~N~l~g~~p~~l~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~ 203 (720)
|++|+|++ +|. +.+ +|+.|+|++|+|++ +|. .+++|+.|+|++|+|++ +|. .+++|+.|+|++|+|++
T Consensus 107 Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~ 174 (571)
T 3cvr_A 107 ACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF 174 (571)
T ss_dssp CCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC
T ss_pred ccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC
Confidence 88888885 676 654 78888888888875 665 56777777777777774 665 45677777777777776
Q ss_pred ccccccccccceEEccCCcCcccCCc
Q 004994 204 TLNVLEDLHLIDLNIENNLFSGPIPE 229 (720)
Q Consensus 204 ~~~~~~~~~l~~l~l~~N~l~g~~p~ 229 (720)
.+. +. ..|+.|+|++|+|+ .+|.
T Consensus 175 lp~-l~-~~L~~L~Ls~N~L~-~lp~ 197 (571)
T 3cvr_A 175 LPE-LP-ESLEALDVSTNLLE-SLPA 197 (571)
T ss_dssp CCC-CC-TTCCEEECCSSCCS-SCCC
T ss_pred cch-hh-CCCCEEECcCCCCC-chhh
Confidence 444 33 44666777777666 5555
No 290
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.79 E-value=8.1e-20 Score=191.52 Aligned_cols=173 Identities=17% Similarity=0.202 Sum_probs=134.7
Q ss_pred ceeEEEecCCcc-cccCCcCcC-------CCCCccEEeccCCcccccCCCCc--c--ccCcEEEecCCcCCCCCcchhhc
Q 004994 72 NVTEIRLTGMNL-GGVLADTLG-------DLESVINIDLSNNHIGGSIPSNL--P--VTVRNFSLSGNQLTGSIPESLSR 139 (720)
Q Consensus 72 ~l~~l~L~~n~l-~~~~~~~~~-------~l~~L~~L~L~~N~l~g~ip~~~--~--~~L~~L~Ls~N~l~g~~p~~l~~ 139 (720)
.++.|+|++|++ .+.+|..+. ++++|++|+|++|++++.+|..+ . .+|+.|+|++|++++. |..++.
T Consensus 64 ~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~ 142 (312)
T 1wwl_A 64 IIKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAE 142 (312)
T ss_dssp HHHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHH
T ss_pred HHhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHH
Confidence 388889999998 456777665 78999999999999998898876 3 7899999999999976 888888
Q ss_pred c-----cccccccccccccCCCCCchhcCCCCCceEeccCCccccc--CCCCC--CCCCCCceeeccccccccccc---c
Q 004994 140 L-----TQLLDLSLNNNHLNGGIPDAFHQFTGLINFDLSANNLTGQ--LPPST--RNLSSLYSLHLQNNKLSGTLN---V 207 (720)
Q Consensus 140 l-----~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~--~p~~~--~~l~~L~~L~l~~N~l~~~~~---~ 207 (720)
+ ++|++|+|++|++++..|..|+++++|++|+|++|++.|. +|..+ ..+++|+.|+|++|+|++... .
T Consensus 143 l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 222 (312)
T 1wwl_A 143 LQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSA 222 (312)
T ss_dssp HHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHH
T ss_pred HHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHH
Confidence 7 8999999999999988888899999999999999998765 33344 888999999999999985432 2
Q ss_pred -cccc-ccceEEccCCcCcccCC-cccCCCccccccCccCC
Q 004994 208 -LEDL-HLIDLNIENNLFSGPIP-EKLLSIPNFRKDGNPFN 245 (720)
Q Consensus 208 -~~~~-~l~~l~l~~N~l~g~~p-~~~~~l~~l~~~~n~~~ 245 (720)
+..+ .|+.|++++|++++.+| ..+..+++|+..+...|
T Consensus 223 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N 263 (312)
T 1wwl_A 223 LAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFT 263 (312)
T ss_dssp HHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTS
T ss_pred HHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCC
Confidence 2233 58999999999998776 33444444444433333
No 291
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.79 E-value=4.8e-19 Score=175.55 Aligned_cols=147 Identities=24% Similarity=0.316 Sum_probs=97.4
Q ss_pred EEecCCcccccCCcCcCCCCCccEEeccCCcccccCCCCcc--ccCcEEEecCCcCCCCCcchhhccccccccccccccc
Q 004994 76 IRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSNLP--VTVRNFSLSGNQLTGSIPESLSRLTQLLDLSLNNNHL 153 (720)
Q Consensus 76 l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~--~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~l~~N~l 153 (720)
+++++++|+. +|..+. ++|+.|+|++|+|++..|..+. .+|+.|+|++|+|++..|..|.++++|++|+|++|+|
T Consensus 16 v~c~~~~l~~-iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l 92 (220)
T 2v9t_B 16 VDCRGKGLTE-IPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKI 92 (220)
T ss_dssp EECTTSCCSS-CCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCC
T ss_pred EEcCCCCcCc-CCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcC
Confidence 4445566653 444443 5677777777777744444554 5677777777777766677777777777777777777
Q ss_pred CCCCCchhcCCCCCceEeccCCcccccCCCCCCCCCCCceeeccccccccccc-cccccc-cceEEccCCcCcc
Q 004994 154 NGGIPDAFHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNNKLSGTLN-VLEDLH-LIDLNIENNLFSG 225 (720)
Q Consensus 154 ~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~~-l~~l~l~~N~l~g 225 (720)
+...+..|.++++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++.++ .+..+. |+.|+|++|.+..
T Consensus 93 ~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 93 TELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCC
Confidence 75444456677777777777777776666677777777777777777776664 244443 7777777777653
No 292
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.79 E-value=4.2e-19 Score=192.18 Aligned_cols=133 Identities=20% Similarity=0.231 Sum_probs=101.6
Q ss_pred CceeEEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCCCcc--ccCcEEEecCCcCCCCCcchhhcccccccccc
Q 004994 71 SNVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSNLP--VTVRNFSLSGNQLTGSIPESLSRLTQLLDLSL 148 (720)
Q Consensus 71 ~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~--~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~l 148 (720)
.+++.|++++|.++...+..|..+++|++|+|++|++++..|..+. .+|++|+|++|++++..|..|+++++|++|+|
T Consensus 45 ~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 124 (390)
T 3o6n_A 45 NNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVL 124 (390)
T ss_dssp CCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEEC
Confidence 5677888888888765555577788888888888888865555665 67888888888888777777888888888888
Q ss_pred cccccCCCCCchhcCCCCCceEeccCCcccccCCCCCCCCCCCceeecccccccc
Q 004994 149 NNNHLNGGIPDAFHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNNKLSG 203 (720)
Q Consensus 149 ~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~ 203 (720)
++|+++...+..|.++++|++|+|++|++++..|..+.++++|+.|+|++|++++
T Consensus 125 ~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 179 (390)
T 3o6n_A 125 ERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTH 179 (390)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSB
T ss_pred CCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCc
Confidence 8888874333446778888888888888886667778888888888888887765
No 293
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.78 E-value=4.8e-19 Score=175.58 Aligned_cols=151 Identities=20% Similarity=0.253 Sum_probs=126.7
Q ss_pred EEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCCC-cc--ccCcEEEecCCcCCCCCcchhhccccccccccccc
Q 004994 75 EIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSN-LP--VTVRNFSLSGNQLTGSIPESLSRLTQLLDLSLNNN 151 (720)
Q Consensus 75 ~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~-~~--~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~l~~N 151 (720)
.+++++|+|+. +|..+. ..++.|+|++|+|++..|.. +. .+|+.|+|++|+|++..|..|.++++|+.|+|++|
T Consensus 15 ~l~~s~n~l~~-iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 91 (220)
T 2v70_A 15 TVDCSNQKLNK-IPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSN 91 (220)
T ss_dssp EEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EeEeCCCCccc-CccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCC
Confidence 67888888885 566553 45689999999999765654 43 68999999999999887778999999999999999
Q ss_pred ccCCCCCchhcCCCCCceEeccCCcccccCCCCCCCCCCCceeeccccccccccc-cccccc-cceEEccCCcCcccCC
Q 004994 152 HLNGGIPDAFHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNNKLSGTLN-VLEDLH-LIDLNIENNLFSGPIP 228 (720)
Q Consensus 152 ~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~~-l~~l~l~~N~l~g~~p 228 (720)
+|++..|..|.++++|++|+|++|+|++..|..|.++++|+.|+|++|+|++.++ .+..+. |+.|+|++|.+++..+
T Consensus 92 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 92 RLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp CCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred ccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 9998878889999999999999999998888899999999999999999998854 556554 8999999999987554
No 294
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.78 E-value=1.9e-19 Score=211.55 Aligned_cols=177 Identities=15% Similarity=0.219 Sum_probs=155.9
Q ss_pred EeecCceeEEEecCCcccc-----------------cCCcCcC--CCCCccEEeccCCcccccCCCCcc--ccCcEEEec
Q 004994 67 FCVFSNVTEIRLTGMNLGG-----------------VLADTLG--DLESVINIDLSNNHIGGSIPSNLP--VTVRNFSLS 125 (720)
Q Consensus 67 ~c~~~~l~~l~L~~n~l~~-----------------~~~~~~~--~l~~L~~L~L~~N~l~g~ip~~~~--~~L~~L~Ls 125 (720)
+..+++|+.|+|++|+|+| .+|+.++ ++++|++|+|++|++.|.+|..+. ++|+.|+|+
T Consensus 444 l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls 523 (876)
T 4ecn_A 444 IQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIA 523 (876)
T ss_dssp GGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECT
T ss_pred HhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECc
Confidence 4567899999999999999 4899988 999999999999999999998887 799999999
Q ss_pred CCc-CCC-CCcchhhccc-------ccccccccccccCCCCCc--hhcCCCCCceEeccCCcccccCCCCCCCCCCCcee
Q 004994 126 GNQ-LTG-SIPESLSRLT-------QLLDLSLNNNHLNGGIPD--AFHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSL 194 (720)
Q Consensus 126 ~N~-l~g-~~p~~l~~l~-------~L~~L~l~~N~l~g~~p~--~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L 194 (720)
+|+ |+| .+|..+++++ +|+.|+|++|+|+ .+|. .|+++++|+.|+|++|+|+ .+| .++++++|+.|
T Consensus 524 ~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L 600 (876)
T 4ecn_A 524 CNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDL 600 (876)
T ss_dssp TCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEE
T ss_pred CCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEE
Confidence 998 999 8999998887 9999999999999 8998 9999999999999999999 899 99999999999
Q ss_pred ecccccccccccccccc-c-cceEEccCCcCcccCCcccCCCcc--ccccCccCCCc
Q 004994 195 HLQNNKLSGTLNVLEDL-H-LIDLNIENNLFSGPIPEKLLSIPN--FRKDGNPFNTT 247 (720)
Q Consensus 195 ~l~~N~l~~~~~~~~~~-~-l~~l~l~~N~l~g~~p~~~~~l~~--l~~~~n~~~~~ 247 (720)
+|++|+|+..+..+..+ . |+.|+|++|+|+ .+|..+..++. |+..+...|..
T Consensus 601 ~Ls~N~l~~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l 656 (876)
T 4ecn_A 601 KLDYNQIEEIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKI 656 (876)
T ss_dssp ECCSSCCSCCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCT
T ss_pred ECcCCccccchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcCCcC
Confidence 99999999655556554 4 999999999999 89988776543 55444444433
No 295
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.78 E-value=4.4e-19 Score=196.13 Aligned_cols=181 Identities=17% Similarity=0.259 Sum_probs=114.3
Q ss_pred EeecCceeEEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCCC--cc--ccCcEEEecCCcCCCCCcch-hhccc
Q 004994 67 FCVFSNVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSN--LP--VTVRNFSLSGNQLTGSIPES-LSRLT 141 (720)
Q Consensus 67 ~c~~~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~--~~--~~L~~L~Ls~N~l~g~~p~~-l~~l~ 141 (720)
+..+++|+.|+|++|++++..|..|+.+++|++|+|++|++++.+|.. +. .+|+.|+|++|++++..|.. +.+++
T Consensus 75 ~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~ 154 (455)
T 3v47_A 75 FRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMR 154 (455)
T ss_dssp TTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCT
T ss_pred ccccccCCEEeCCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCC
Confidence 444566777777777776666666777777777777777776544433 33 56777777777777665655 66677
Q ss_pred ccccccccccccCCCCCchhcCC----------------------------------C----------------------
Q 004994 142 QLLDLSLNNNHLNGGIPDAFHQF----------------------------------T---------------------- 165 (720)
Q Consensus 142 ~L~~L~l~~N~l~g~~p~~~~~l----------------------------------~---------------------- 165 (720)
+|++|+|++|++++..|..+..+ +
T Consensus 155 ~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~ 234 (455)
T 3v47_A 155 RFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFD 234 (455)
T ss_dssp TCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHH
T ss_pred cccEEeCCCCcccccChhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhc
Confidence 77777777777766555544332 2
Q ss_pred -----------------------------------------CCceEeccCCcccccCCCCCCCCCCCceeeccccccccc
Q 004994 166 -----------------------------------------GLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNNKLSGT 204 (720)
Q Consensus 166 -----------------------------------------~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~ 204 (720)
+|+.|+|++|++++.+|..+.++++|+.|+|++|++++.
T Consensus 235 ~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~ 314 (455)
T 3v47_A 235 AIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKI 314 (455)
T ss_dssp HTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEE
T ss_pred cccccceeeEeeccccccccccchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCccccc
Confidence 344444444444444566677777777777777777766
Q ss_pred cc-cccccc-cceEEccCCcCcccCCcccCCCccccccCccCCCc
Q 004994 205 LN-VLEDLH-LIDLNIENNLFSGPIPEKLLSIPNFRKDGNPFNTT 247 (720)
Q Consensus 205 ~~-~~~~~~-l~~l~l~~N~l~g~~p~~~~~l~~l~~~~n~~~~~ 247 (720)
++ .+..+. |+.|+|++|.+++..|..+..+++|+..+...|..
T Consensus 315 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 359 (455)
T 3v47_A 315 DDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHI 359 (455)
T ss_dssp CTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCC
T ss_pred ChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcc
Confidence 54 444443 77777777777766677766666666555554443
No 296
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.78 E-value=1.2e-18 Score=172.61 Aligned_cols=149 Identities=23% Similarity=0.263 Sum_probs=110.3
Q ss_pred CCCCCCCceeEeec-----------CceeEEEecCCcccccCC-cCcCCCCCccEEeccCCcccccCCCCcc--ccCcEE
Q 004994 57 DPCGDSWQGVFCVF-----------SNVTEIRLTGMNLGGVLA-DTLGDLESVINIDLSNNHIGGSIPSNLP--VTVRNF 122 (720)
Q Consensus 57 ~~c~~~w~gv~c~~-----------~~l~~l~L~~n~l~~~~~-~~~~~l~~L~~L~L~~N~l~g~ip~~~~--~~L~~L 122 (720)
..|.|.|..+.|.. ..++.|+|++|+|++..+ ..|..+++|+.|+|++|+|++..|..+. .+|+.|
T Consensus 7 ~~C~C~~~~l~~s~n~l~~iP~~~~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L 86 (220)
T 2v70_A 7 EKCRCEGTTVDCSNQKLNKIPEHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEI 86 (220)
T ss_dssp TTCEEETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEE
T ss_pred CCCEECCCEeEeCCCCcccCccCCCCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEE
Confidence 34555677777742 246678888888877654 4577788888888888888765555555 678888
Q ss_pred EecCCcCCCCCcchhhcccccccccccccccCCCCCchhcCCCCCceEeccCCcccccCCCCCCCCCCCceeeccccccc
Q 004994 123 SLSGNQLTGSIPESLSRLTQLLDLSLNNNHLNGGIPDAFHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNNKLS 202 (720)
Q Consensus 123 ~Ls~N~l~g~~p~~l~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~ 202 (720)
+|++|+|++..|..|.++++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..|..|..+++|+.|+|++|.++
T Consensus 87 ~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 166 (220)
T 2v70_A 87 LLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFN 166 (220)
T ss_dssp ECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEE
T ss_pred ECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCc
Confidence 88888888776677777888888888888888777777888888888888888887766777888888888888888777
Q ss_pred ccc
Q 004994 203 GTL 205 (720)
Q Consensus 203 ~~~ 205 (720)
+..
T Consensus 167 c~c 169 (220)
T 2v70_A 167 CNC 169 (220)
T ss_dssp CSG
T ss_pred CCC
Confidence 544
No 297
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.78 E-value=1e-18 Score=184.89 Aligned_cols=186 Identities=22% Similarity=0.307 Sum_probs=156.5
Q ss_pred CCCCCCCceeEeec-----------CceeEEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCCCcc--ccCcEEE
Q 004994 57 DPCGDSWQGVFCVF-----------SNVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSNLP--VTVRNFS 123 (720)
Q Consensus 57 ~~c~~~w~gv~c~~-----------~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~--~~L~~L~ 123 (720)
..|.|.|..+.|.. ++++.|+|++|++++..|..|..+++|++|+|++|++++..|..+. .+|++|+
T Consensus 29 ~~c~c~l~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 108 (332)
T 2ft3_A 29 FGCHCHLRVVQCSDLGLKAVPKEISPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLY 108 (332)
T ss_dssp SSCEEETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEE
T ss_pred CCCcccCCEEECCCCCccccCCCCCCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEE
Confidence 44555788888852 4689999999999988888999999999999999999977787776 7899999
Q ss_pred ecCCcCCCCCcchhhcccccccccccccccCCCCCchhcCCCCCceEeccCCccc--ccCCCCCCCCCCCceeecccccc
Q 004994 124 LSGNQLTGSIPESLSRLTQLLDLSLNNNHLNGGIPDAFHQFTGLINFDLSANNLT--GQLPPSTRNLSSLYSLHLQNNKL 201 (720)
Q Consensus 124 Ls~N~l~g~~p~~l~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~--g~~p~~~~~l~~L~~L~l~~N~l 201 (720)
|++|+++ .+|..+. ++|++|+|++|++++..+..|.++++|+.|++++|.++ +..|..+..+ +|+.|++++|++
T Consensus 109 L~~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l 184 (332)
T 2ft3_A 109 ISKNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKL 184 (332)
T ss_dssp CCSSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBC
T ss_pred CCCCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCC
Confidence 9999999 7777665 89999999999999776777999999999999999996 4678888888 999999999999
Q ss_pred ccccccccccccceEEccCCcCcccCCcccCCCccccccCccCCCc
Q 004994 202 SGTLNVLEDLHLIDLNIENNLFSGPIPEKLLSIPNFRKDGNPFNTT 247 (720)
Q Consensus 202 ~~~~~~~~~~~l~~l~l~~N~l~g~~p~~~~~l~~l~~~~n~~~~~ 247 (720)
++.+..+. ..|+.|++++|.+++..|..+..+++|+..+...|..
T Consensus 185 ~~l~~~~~-~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l 229 (332)
T 2ft3_A 185 TGIPKDLP-ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQI 229 (332)
T ss_dssp SSCCSSSC-SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCC
T ss_pred CccCcccc-CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcC
Confidence 98665433 4588999999999988888888877777666655543
No 298
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.78 E-value=2.5e-19 Score=191.19 Aligned_cols=181 Identities=16% Similarity=0.173 Sum_probs=150.2
Q ss_pred CCceeEeec-------------CceeEEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCCCcc--ccCcEEEecC
Q 004994 62 SWQGVFCVF-------------SNVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSNLP--VTVRNFSLSG 126 (720)
Q Consensus 62 ~w~gv~c~~-------------~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~--~~L~~L~Ls~ 126 (720)
.|.|+ |.. ++|+.|+|++|++++..+..|..+++|++|+|++|++++..|..+. .+|++|+|++
T Consensus 31 ~~~~~-c~~~~~~l~~iP~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~ 109 (353)
T 2z80_A 31 DRNGI-CKGSSGSLNSIPSGLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSY 109 (353)
T ss_dssp CTTSE-EECCSTTCSSCCTTCCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CCCeE-eeCCCCCcccccccccccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCC
Confidence 78777 653 3799999999999988777999999999999999999977777776 7899999999
Q ss_pred CcCCCCCcchhhcccccccccccccccCCCCCc--hhcCCCCCceEeccCC-cccccCCCCCCCCCCCceeecccccccc
Q 004994 127 NQLTGSIPESLSRLTQLLDLSLNNNHLNGGIPD--AFHQFTGLINFDLSAN-NLTGQLPPSTRNLSSLYSLHLQNNKLSG 203 (720)
Q Consensus 127 N~l~g~~p~~l~~l~~L~~L~l~~N~l~g~~p~--~~~~l~~L~~L~ls~N-~l~g~~p~~~~~l~~L~~L~l~~N~l~~ 203 (720)
|++++..+..|.++++|++|+|++|++++ +|. .|.++++|+.|++++| .+++..|..+.++++|+.|+|++|++++
T Consensus 110 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~ 188 (353)
T 2z80_A 110 NYLSNLSSSWFKPLSSLTFLNLLGNPYKT-LGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQS 188 (353)
T ss_dssp SCCSSCCHHHHTTCTTCSEEECTTCCCSS-SCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCE
T ss_pred CcCCcCCHhHhCCCccCCEEECCCCCCcc-cCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCc
Confidence 99996555559999999999999999995 554 7999999999999999 5776667889999999999999999998
Q ss_pred cc-ccccccc-cceEEccCCcCcccCCcc----cCCCccccccCccCC
Q 004994 204 TL-NVLEDLH-LIDLNIENNLFSGPIPEK----LLSIPNFRKDGNPFN 245 (720)
Q Consensus 204 ~~-~~~~~~~-l~~l~l~~N~l~g~~p~~----~~~l~~l~~~~n~~~ 245 (720)
.. ..+..+. |+.|++++|.++ .+|.. +.++..|.+.+|...
T Consensus 189 ~~~~~l~~l~~L~~L~l~~n~l~-~~~~~~~~~~~~L~~L~L~~n~l~ 235 (353)
T 2z80_A 189 YEPKSLKSIQNVSHLILHMKQHI-LLLEIFVDVTSSVECLELRDTDLD 235 (353)
T ss_dssp ECTTTTTTCSEEEEEEEECSCST-THHHHHHHHTTTEEEEEEESCBCT
T ss_pred cCHHHHhccccCCeecCCCCccc-cchhhhhhhcccccEEECCCCccc
Confidence 85 4566655 999999999996 55543 344555555666543
No 299
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.78 E-value=3.9e-19 Score=203.37 Aligned_cols=158 Identities=19% Similarity=0.243 Sum_probs=88.7
Q ss_pred eEeecCceeEEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCCC-cc--ccCcEEEecCCcCCCCCcchhhcccc
Q 004994 66 VFCVFSNVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSN-LP--VTVRNFSLSGNQLTGSIPESLSRLTQ 142 (720)
Q Consensus 66 v~c~~~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~-~~--~~L~~L~Ls~N~l~g~~p~~l~~l~~ 142 (720)
.++.+++|+.|+|++|.|++..|..|+.+++|++|+|++|+|+ .+|.. +. .+|+.|+|++|.|++..|..|+++++
T Consensus 94 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 172 (597)
T 3oja_B 94 AFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTS 172 (597)
T ss_dssp TTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTT
T ss_pred HhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCC-CCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCc
Confidence 3444556666666666666655555666666666666666666 33333 22 45666666666666555555666666
Q ss_pred cccccccccccCCCC-----------------------------------------------------------CchhcC
Q 004994 143 LLDLSLNNNHLNGGI-----------------------------------------------------------PDAFHQ 163 (720)
Q Consensus 143 L~~L~l~~N~l~g~~-----------------------------------------------------------p~~~~~ 163 (720)
|+.|+|++|.|++.. +..+..
T Consensus 173 L~~L~L~~N~l~~~~~~~l~~L~~L~l~~n~l~~l~~~~~L~~L~ls~n~l~~~~~~~~~~L~~L~L~~n~l~~~~~l~~ 252 (597)
T 3oja_B 173 LQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGPVNVELTILKLQHNNLTDTAWLLN 252 (597)
T ss_dssp CCEEECTTSCCSBCCGGGCTTCSEEECCSSCCSEEECCTTCSEEECCSSCCCEEECSCCSCCCEEECCSSCCCCCGGGGG
T ss_pred CcEEECcCCCCCCcChhhhhhhhhhhcccCccccccCCchhheeeccCCcccccccccCCCCCEEECCCCCCCCChhhcc
Confidence 665555555554311 122445
Q ss_pred CCCCceEeccCCcccccCCCCCCCCCCCceeecccccccccccccccc-ccceEEccCCcCc
Q 004994 164 FTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNNKLSGTLNVLEDL-HLIDLNIENNLFS 224 (720)
Q Consensus 164 l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~-~l~~l~l~~N~l~ 224 (720)
+++|+.|+|++|.|++.+|..+.++++|+.|+|++|.|++.+.....+ .|+.|+|++|.++
T Consensus 253 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~L~~L~Ls~N~l~ 314 (597)
T 3oja_B 253 YPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVALNLYGQPIPTLKVLDLSHNHLL 314 (597)
T ss_dssp CTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCEEECSSSCCTTCCEEECCSSCCC
T ss_pred CCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCCCCcccccCCCCcEEECCCCCCC
Confidence 556666666666666655666666666666666666666544333322 2555555555555
No 300
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.78 E-value=2.4e-19 Score=199.55 Aligned_cols=176 Identities=16% Similarity=0.076 Sum_probs=128.1
Q ss_pred CCceeEeecCceeEEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCCCccccCcEEEecCCcCCCCCcchhhccc
Q 004994 62 SWQGVFCVFSNVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSNLPVTVRNFSLSGNQLTGSIPESLSRLT 141 (720)
Q Consensus 62 ~w~gv~c~~~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~~~L~~L~Ls~N~l~g~~p~~l~~l~ 141 (720)
...+.++.+++|+.|+|++|.+++..| |+.+++|++|+|++|+|++. |.. ++|+.|+|++|+|++..+. .++
T Consensus 49 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l-~~~--~~L~~L~L~~N~l~~~~~~---~l~ 120 (487)
T 3oja_A 49 ISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQEL-LVG--PSIETLHAANNNISRVSCS---RGQ 120 (487)
T ss_dssp CCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEE-EEC--TTCCEEECCSSCCCCEEEC---CCS
T ss_pred CCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCC-CCC--CCcCEEECcCCcCCCCCcc---ccC
Confidence 344566778889999999999987765 88888999999999888843 322 5777788888877755543 346
Q ss_pred ccccccccccccCCCCCchhcCCCCCceEeccCCcccccCCCCCC-CCCCCceeeccccccccccccccccccceEEccC
Q 004994 142 QLLDLSLNNNHLNGGIPDAFHQFTGLINFDLSANNLTGQLPPSTR-NLSSLYSLHLQNNKLSGTLNVLEDLHLIDLNIEN 220 (720)
Q Consensus 142 ~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~-~l~~L~~L~l~~N~l~~~~~~~~~~~l~~l~l~~ 220 (720)
+|+.|+|++|.|++..|..|+++++|+.|+|++|.|++.+|..+. .+++|+.|+|++|.|++.++......|+.|+|++
T Consensus 121 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~~~~~~l~~L~~L~Ls~ 200 (487)
T 3oja_A 121 GKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKGQVVFAKLKTLDLSS 200 (487)
T ss_dssp SCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEECCCCCTTCCEEECCS
T ss_pred CCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccccccccCCCCCEEECCC
Confidence 788888888888877777788888888888888888877777765 6788888888888887775544444588888888
Q ss_pred CcCcccCCcccCCCccccccCccCCC
Q 004994 221 NLFSGPIPEKLLSIPNFRKDGNPFNT 246 (720)
Q Consensus 221 N~l~g~~p~~~~~l~~l~~~~n~~~~ 246 (720)
|.|++. |..+..+++|+..+...|.
T Consensus 201 N~l~~~-~~~~~~l~~L~~L~Ls~N~ 225 (487)
T 3oja_A 201 NKLAFM-GPEFQSAAGVTWISLRNNK 225 (487)
T ss_dssp SCCCEE-CGGGGGGTTCSEEECTTSC
T ss_pred CCCCCC-CHhHcCCCCccEEEecCCc
Confidence 888864 4446555555554444443
No 301
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.78 E-value=4.9e-19 Score=171.59 Aligned_cols=159 Identities=21% Similarity=0.275 Sum_probs=122.7
Q ss_pred eEEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCCC-cc--ccCcEEEecCCcCCCCCcchhhcccccccccccc
Q 004994 74 TEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSN-LP--VTVRNFSLSGNQLTGSIPESLSRLTQLLDLSLNN 150 (720)
Q Consensus 74 ~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~-~~--~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~l~~ 150 (720)
+.|++++|+|+ .+|..+.. +|++|+|++|+|++..|.. +. .+|+.|+|++|+|++..|..|.++++|+.|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 46788888886 56766644 8999999999998655543 54 7899999999999988899999999999999999
Q ss_pred cccCCCCCchhcCCCCCceEeccCCcccccCCCCCCCCCCCceeeccccccccccccccccc-cceEEccCCcCcccCCc
Q 004994 151 NHLNGGIPDAFHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNNKLSGTLNVLEDLH-LIDLNIENNLFSGPIPE 229 (720)
Q Consensus 151 N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~-l~~l~l~~N~l~g~~p~ 229 (720)
|+|++..|..|.++++|+.|+|++|+|++.+|..+..+++|+.|+|++|.|++..+...... +....+..+......|.
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~~~l~~~~~~~~~~~C~~P~ 167 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGAPS 167 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHHCCSGGGCBBCSST
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHHHHHHHcCCCCCCCCCCCCh
Confidence 99998888889999999999999999998889999999999999999999987654211111 22223344444445555
Q ss_pred ccCCCc
Q 004994 230 KLLSIP 235 (720)
Q Consensus 230 ~~~~l~ 235 (720)
.+....
T Consensus 168 ~l~~~~ 173 (192)
T 1w8a_A 168 KVRDVQ 173 (192)
T ss_dssp TTTTSB
T ss_pred HHcCCC
Confidence 554443
No 302
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.78 E-value=6.7e-19 Score=188.43 Aligned_cols=173 Identities=21% Similarity=0.221 Sum_probs=144.9
Q ss_pred eEEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCCCcc---ccCcEEEecCCcCCCCCcchhhcccccccccccc
Q 004994 74 TEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSNLP---VTVRNFSLSGNQLTGSIPESLSRLTQLLDLSLNN 150 (720)
Q Consensus 74 ~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~---~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~l~~ 150 (720)
+.+++++++|+. +|..+. ..|+.|+|++|+|++..+..+. .+|+.|+|++|+|++..|..|.++++|++|+|++
T Consensus 21 ~~l~c~~~~l~~-iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLPN-VPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCSS-CCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcCc-cCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 468889999985 666554 4689999999999966666553 6899999999999988888899999999999999
Q ss_pred cccCCCCCchhcCCCCCceEeccCCcccccCCCCCCCCCCCceeeccccccccccccc----ccc-ccceEEccCCcCcc
Q 004994 151 NHLNGGIPDAFHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNNKLSGTLNVL----EDL-HLIDLNIENNLFSG 225 (720)
Q Consensus 151 N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~----~~~-~l~~l~l~~N~l~g 225 (720)
|+|++..+..|.++++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++.+... ..+ .|+.|+|++|+|++
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 177 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKK 177 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCC
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCc
Confidence 9999877788999999999999999999888899999999999999999999877543 334 49999999999995
Q ss_pred cCCcccCCCc-----cccccCccCCCccc
Q 004994 226 PIPEKLLSIP-----NFRKDGNPFNTTVI 249 (720)
Q Consensus 226 ~~p~~~~~l~-----~l~~~~n~~~~~~~ 249 (720)
..+..+..++ .|.+.+|+|.|.|.
T Consensus 178 l~~~~~~~l~~~~l~~l~l~~N~~~C~C~ 206 (361)
T 2xot_A 178 LPLTDLQKLPAWVKNGLYLHNNPLECDCK 206 (361)
T ss_dssp CCHHHHHHSCHHHHTTEECCSSCEECCHH
T ss_pred cCHHHhhhccHhhcceEEecCCCccCCcC
Confidence 5445565554 46788999988763
No 303
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.78 E-value=3.3e-19 Score=204.65 Aligned_cols=172 Identities=17% Similarity=0.164 Sum_probs=97.1
Q ss_pred ecCceeEEEecCCccccc--CCcCcCCCCCccEEeccCCcccccCCCCcc--ccCcEEEecCCcCCCCCc-chhhccccc
Q 004994 69 VFSNVTEIRLTGMNLGGV--LADTLGDLESVINIDLSNNHIGGSIPSNLP--VTVRNFSLSGNQLTGSIP-ESLSRLTQL 143 (720)
Q Consensus 69 ~~~~l~~l~L~~n~l~~~--~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~--~~L~~L~Ls~N~l~g~~p-~~l~~l~~L 143 (720)
.+++|+.|+|++|++++. +|..+..+++|+.|+|++|+++ .+|..+. .+|+.|+|++|++++..| ..+.++++|
T Consensus 348 ~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L 426 (606)
T 3vq2_A 348 ALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAI-IMSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKL 426 (606)
T ss_dssp CCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEE-EECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTC
T ss_pred cCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCccc-cchhhccCCCCCCeeECCCCccCCccChhhhhccccC
Confidence 455666666666666654 2555566666666666666655 3444443 456666666666655555 455556666
Q ss_pred ccccccccccCCCCCchhcCCCCCceEeccCCcccc-cCCCCCCCCCCCceeeccccccccccc-cccccc-cceEEccC
Q 004994 144 LDLSLNNNHLNGGIPDAFHQFTGLINFDLSANNLTG-QLPPSTRNLSSLYSLHLQNNKLSGTLN-VLEDLH-LIDLNIEN 220 (720)
Q Consensus 144 ~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g-~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~~-l~~l~l~~ 220 (720)
+.|+|++|.+++.+|..|.++++|+.|+|++|++++ .+|..+..+++|+.|+|++|++++.++ .+..+. |+.|++++
T Consensus 427 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~ 506 (606)
T 3vq2_A 427 LYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSH 506 (606)
T ss_dssp CEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCC
Confidence 666666666655555555566666666666666654 245555556666666666666555543 233333 55566666
Q ss_pred CcCcccCCcccCCCccccccC
Q 004994 221 NLFSGPIPEKLLSIPNFRKDG 241 (720)
Q Consensus 221 N~l~g~~p~~~~~l~~l~~~~ 241 (720)
|++++.+|..+..+++|+..+
T Consensus 507 N~l~~~~~~~~~~l~~L~~L~ 527 (606)
T 3vq2_A 507 NNLLFLDSSHYNQLYSLSTLD 527 (606)
T ss_dssp SCCSCEEGGGTTTCTTCCEEE
T ss_pred CcCCCcCHHHccCCCcCCEEE
Confidence 666555555555544444333
No 304
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.78 E-value=1.2e-18 Score=192.41 Aligned_cols=181 Identities=17% Similarity=0.202 Sum_probs=150.8
Q ss_pred eeEeecCceeEEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCCCcc--ccCcEEEecCCcCCCCCcchhhcccc
Q 004994 65 GVFCVFSNVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSNLP--VTVRNFSLSGNQLTGSIPESLSRLTQ 142 (720)
Q Consensus 65 gv~c~~~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~--~~L~~L~Ls~N~l~g~~p~~l~~l~~ 142 (720)
+.+..+++|+.|+|++|+|++..+..|..+++|++|+|++|+|++..+..+. .+|++|+|++|+|++..+..|.++++
T Consensus 93 ~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 172 (452)
T 3zyi_A 93 DTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPS 172 (452)
T ss_dssp TTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTT
T ss_pred HHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCc
Confidence 4456788999999999999999999999999999999999999954444454 79999999999999777778999999
Q ss_pred ccccccccc-ccCCCCCchhcCCCCCceEeccCCcccccCCCCCCCCCCCceeeccccccccccc-cccccc-cceEEcc
Q 004994 143 LLDLSLNNN-HLNGGIPDAFHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNNKLSGTLN-VLEDLH-LIDLNIE 219 (720)
Q Consensus 143 L~~L~l~~N-~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~~-l~~l~l~ 219 (720)
|+.|+|++| .+....+..|.++++|+.|+|++|+|+ .+| .+..+++|+.|+|++|+|++..+ .+..+. |+.|+|+
T Consensus 173 L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 250 (452)
T 3zyi_A 173 LMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIK-DMP-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVM 250 (452)
T ss_dssp CCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCS-SCC-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECT
T ss_pred ccEEeCCCCCCccccChhhccCCCCCCEEECCCCccc-ccc-cccccccccEEECcCCcCcccCcccccCccCCCEEEeC
Confidence 999999984 555334456899999999999999998 455 58889999999999999998864 455554 9999999
Q ss_pred CCcCcccCCcccCCCccccccCccCCCc
Q 004994 220 NNLFSGPIPEKLLSIPNFRKDGNPFNTT 247 (720)
Q Consensus 220 ~N~l~g~~p~~~~~l~~l~~~~n~~~~~ 247 (720)
+|++++..|..|..+++|+..+...|..
T Consensus 251 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l 278 (452)
T 3zyi_A 251 NSQVSLIERNAFDGLASLVELNLAHNNL 278 (452)
T ss_dssp TSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred CCcCceECHHHhcCCCCCCEEECCCCcC
Confidence 9999988888888777777666555543
No 305
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.77 E-value=3.4e-19 Score=186.59 Aligned_cols=159 Identities=18% Similarity=0.180 Sum_probs=93.8
Q ss_pred CceeEEEecCCcccccCCcCc--CCCCCccEEeccCCcccccCCCC----c--cccCcEEEecCCcCCCCCcchhhcccc
Q 004994 71 SNVTEIRLTGMNLGGVLADTL--GDLESVINIDLSNNHIGGSIPSN----L--PVTVRNFSLSGNQLTGSIPESLSRLTQ 142 (720)
Q Consensus 71 ~~l~~l~L~~n~l~~~~~~~~--~~l~~L~~L~L~~N~l~g~ip~~----~--~~~L~~L~Ls~N~l~g~~p~~l~~l~~ 142 (720)
++|++|+|++|++++..|..+ ..+++|++|+|++|++++..|.. + .++|+.|+|++|++++..|..|+++++
T Consensus 91 ~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~ 170 (310)
T 4glp_A 91 SRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPA 170 (310)
T ss_dssp SCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTT
T ss_pred CceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCC
Confidence 457777777777777766666 66777777777777776544411 1 146677777777776666666666777
Q ss_pred cccccccccccCCC--C--CchhcCCCCCceEeccCCcccccCCC----CCCCCCCCceeecccccccccc-cccccc--
Q 004994 143 LLDLSLNNNHLNGG--I--PDAFHQFTGLINFDLSANNLTGQLPP----STRNLSSLYSLHLQNNKLSGTL-NVLEDL-- 211 (720)
Q Consensus 143 L~~L~l~~N~l~g~--~--p~~~~~l~~L~~L~ls~N~l~g~~p~----~~~~l~~L~~L~l~~N~l~~~~-~~~~~~-- 211 (720)
|++|+|++|++.+. + +..+..+++|++|+|++|+|+ .+|. .+.++++|+.|+|++|+|++.. +.+..+
T Consensus 171 L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ 249 (310)
T 4glp_A 171 LTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMW 249 (310)
T ss_dssp CCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCC
T ss_pred CCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccC
Confidence 77777777766431 1 122345666666666666665 2222 1345566666666666666552 222222
Q ss_pred --ccceEEccCCcCcccCCccc
Q 004994 212 --HLIDLNIENNLFSGPIPEKL 231 (720)
Q Consensus 212 --~l~~l~l~~N~l~g~~p~~~ 231 (720)
.|+.|+|++|+|+ .+|..+
T Consensus 250 ~~~L~~L~Ls~N~l~-~lp~~~ 270 (310)
T 4glp_A 250 SSALNSLNLSFAGLE-QVPKGL 270 (310)
T ss_dssp CTTCCCEECCSSCCC-SCCSCC
T ss_pred cCcCCEEECCCCCCC-chhhhh
Confidence 3666666666666 455544
No 306
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.77 E-value=5.7e-19 Score=202.66 Aligned_cols=170 Identities=18% Similarity=0.187 Sum_probs=82.4
Q ss_pred eecCceeEEEecCCcccccC--CcCcCCCCCccEEeccCCcccccCCCCcc--ccCcEEEecCCcCCCCCcch-hhcccc
Q 004994 68 CVFSNVTEIRLTGMNLGGVL--ADTLGDLESVINIDLSNNHIGGSIPSNLP--VTVRNFSLSGNQLTGSIPES-LSRLTQ 142 (720)
Q Consensus 68 c~~~~l~~l~L~~n~l~~~~--~~~~~~l~~L~~L~L~~N~l~g~ip~~~~--~~L~~L~Ls~N~l~g~~p~~-l~~l~~ 142 (720)
..+++|+.|+|++|++++.. +..+..+++|+.|+|++|++.+..|..+. .+|+.|+|++|++++..|.. +.++++
T Consensus 347 ~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~ 426 (606)
T 3t6q_A 347 ENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHL 426 (606)
T ss_dssp TTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTT
T ss_pred hccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCccc
Confidence 34445555555555555443 44455555555555555555544444443 44555555555555443332 445555
Q ss_pred cccccccccccCCCCCchhcCCCCCceEeccCCccccc---CCCCCCCCCCCceeeccccccccccc-cccccc-cceEE
Q 004994 143 LLDLSLNNNHLNGGIPDAFHQFTGLINFDLSANNLTGQ---LPPSTRNLSSLYSLHLQNNKLSGTLN-VLEDLH-LIDLN 217 (720)
Q Consensus 143 L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~---~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~~-l~~l~ 217 (720)
|+.|+|++|.+++..|..|.++++|++|+|++|++++. .+..+..+++|+.|+|++|++++.++ .+..+. |+.|+
T Consensus 427 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 506 (606)
T 3t6q_A 427 LKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVD 506 (606)
T ss_dssp CCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred CCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEE
Confidence 55555555555544444455555555555555555431 12334445555555555555544432 233332 45555
Q ss_pred ccCCcCcccCCcccCCCccc
Q 004994 218 IENNLFSGPIPEKLLSIPNF 237 (720)
Q Consensus 218 l~~N~l~g~~p~~~~~l~~l 237 (720)
|++|++++..|..+.+++.|
T Consensus 507 Ls~N~l~~~~~~~l~~l~~L 526 (606)
T 3t6q_A 507 LSHNRLTSSSIEALSHLKGI 526 (606)
T ss_dssp CCSSCCCGGGGGGGTTCCSC
T ss_pred CCCCccCcCChhHhCccccc
Confidence 55555555444444444443
No 307
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.77 E-value=1.8e-18 Score=177.19 Aligned_cols=163 Identities=23% Similarity=0.286 Sum_probs=142.3
Q ss_pred eeEeecCceeEEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCCCcc--ccCcEEEecCCcCCCCCcchhhcccc
Q 004994 65 GVFCVFSNVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSNLP--VTVRNFSLSGNQLTGSIPESLSRLTQ 142 (720)
Q Consensus 65 gv~c~~~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~--~~L~~L~Ls~N~l~g~~p~~l~~l~~ 142 (720)
+.+..+++|+.|+|++|+++...+..|..+++|++|+|++|++++..+..+. .+|+.|+|++|++++..|..|.++++
T Consensus 55 ~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~ 134 (270)
T 2o6q_A 55 KAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTK 134 (270)
T ss_dssp TSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTT
T ss_pred HHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcC
Confidence 4566788999999999999987777789999999999999999954444444 78999999999999888888999999
Q ss_pred cccccccccccCCCCCchhcCCCCCceEeccCCcccccCCCCCCCCCCCceeecccccccccccc-ccccc-cceEEccC
Q 004994 143 LLDLSLNNNHLNGGIPDAFHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNNKLSGTLNV-LEDLH-LIDLNIEN 220 (720)
Q Consensus 143 L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~-l~~l~l~~ 220 (720)
|+.|+|++|+|++..+..|..+++|+.|+|++|++++..+..|.++++|+.|+|++|+|++.++. +..+. |+.|+|++
T Consensus 135 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~ 214 (270)
T 2o6q_A 135 LTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQE 214 (270)
T ss_dssp CCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecC
Confidence 99999999999976667799999999999999999976666799999999999999999987753 55554 99999999
Q ss_pred CcCcccC
Q 004994 221 NLFSGPI 227 (720)
Q Consensus 221 N~l~g~~ 227 (720)
|.+...-
T Consensus 215 N~~~c~c 221 (270)
T 2o6q_A 215 NPWDCTC 221 (270)
T ss_dssp SCBCCSS
T ss_pred CCeeCCC
Confidence 9997543
No 308
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.77 E-value=2.6e-18 Score=171.37 Aligned_cols=151 Identities=25% Similarity=0.301 Sum_probs=130.5
Q ss_pred ccEEeccCCcccccCCCCccccCcEEEecCCcCCCCCcchhhcccccccccccccccCCCCCchhcCCCCCceEeccCCc
Q 004994 97 VINIDLSNNHIGGSIPSNLPVTVRNFSLSGNQLTGSIPESLSRLTQLLDLSLNNNHLNGGIPDAFHQFTGLINFDLSANN 176 (720)
Q Consensus 97 L~~L~L~~N~l~g~ip~~~~~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~ 176 (720)
.+.+++++|++. .+|..++.+|+.|+|++|+|++..|..|.++++|+.|+|++|+|+...+..|.++++|+.|+|++|+
T Consensus 21 ~~~v~c~~~~l~-~ip~~~~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~ 99 (229)
T 3e6j_A 21 GTTVDCRSKRHA-SVPAGIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQ 99 (229)
T ss_dssp TTEEECTTSCCS-SCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred CCEeEccCCCcC-ccCCCCCCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCc
Confidence 457899999998 9999999999999999999999889999999999999999999986666778999999999999999
Q ss_pred ccccCCCCCCCCCCCceeeccccccccccccccccc-cceEEccCCcCcccCCcccCCCcc---ccccCccCCCcc
Q 004994 177 LTGQLPPSTRNLSSLYSLHLQNNKLSGTLNVLEDLH-LIDLNIENNLFSGPIPEKLLSIPN---FRKDGNPFNTTV 248 (720)
Q Consensus 177 l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~-l~~l~l~~N~l~g~~p~~~~~l~~---l~~~~n~~~~~~ 248 (720)
|++..+..+..+++|+.|+|++|+|+..+..+..+. |+.|+|++|+|++..+..+..+++ |.+.+|++.|.|
T Consensus 100 l~~l~~~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c 175 (229)
T 3e6j_A 100 LTVLPSAVFDRLVHLKELFMCCNKLTELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCEC 175 (229)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCSCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTB
T ss_pred CCccChhHhCcchhhCeEeccCCcccccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCc
Confidence 997666778999999999999999997776666655 999999999999766666665555 456777776543
No 309
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.77 E-value=1.5e-18 Score=171.95 Aligned_cols=150 Identities=26% Similarity=0.327 Sum_probs=131.3
Q ss_pred cEEeccCCcccccCCCCccccCcEEEecCCcCCCCCcchhhcccccccccccccccCCCCCchhcCCCCCceEeccCCcc
Q 004994 98 INIDLSNNHIGGSIPSNLPVTVRNFSLSGNQLTGSIPESLSRLTQLLDLSLNNNHLNGGIPDAFHQFTGLINFDLSANNL 177 (720)
Q Consensus 98 ~~L~L~~N~l~g~ip~~~~~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l 177 (720)
+.+++++|+++ .+|..++.+|+.|+|++|+|++..+..|.++++|+.|+|++|+|++..|..|.++++|++|+|++|+|
T Consensus 14 ~~v~c~~~~l~-~iP~~l~~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l 92 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLPETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKI 92 (220)
T ss_dssp TEEECTTSCCS-SCCSSCCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCC
T ss_pred CEEEcCCCCcC-cCCCccCcCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcC
Confidence 57999999999 89999999999999999999987778899999999999999999988899999999999999999999
Q ss_pred cccCCCCCCCCCCCceeeccccccccccc-cccccc-cceEEccCCcCcccCCcccCCCcc---ccccCccCCCcc
Q 004994 178 TGQLPPSTRNLSSLYSLHLQNNKLSGTLN-VLEDLH-LIDLNIENNLFSGPIPEKLLSIPN---FRKDGNPFNTTV 248 (720)
Q Consensus 178 ~g~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~~-l~~l~l~~N~l~g~~p~~~~~l~~---l~~~~n~~~~~~ 248 (720)
+...+..|.++++|+.|+|++|+|++..+ .+..+. |+.|+|++|+|++..+..+..+++ |.+.+|+|.|.|
T Consensus 93 ~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c 168 (220)
T 2v9t_B 93 TELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDC 168 (220)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECSG
T ss_pred CccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCCC
Confidence 95555567899999999999999999864 455554 999999999999877776765554 556788887654
No 310
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.76 E-value=2.4e-18 Score=178.19 Aligned_cols=158 Identities=25% Similarity=0.236 Sum_probs=138.8
Q ss_pred eeEeecCceeEEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCCCcc--ccCcEEEecCCcCCCCCcchhhcccc
Q 004994 65 GVFCVFSNVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSNLP--VTVRNFSLSGNQLTGSIPESLSRLTQ 142 (720)
Q Consensus 65 gv~c~~~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~--~~L~~L~Ls~N~l~g~~p~~l~~l~~ 142 (720)
+.+..+++|+.|+|++|+|++..+. +.+++|++|+|++|+|+ .+|..+. .+|+.|+|++|+|++..|..|.++++
T Consensus 49 ~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~ 125 (290)
T 1p9a_G 49 ATLMPYTRLTQLNLDRAELTKLQVD--GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGE 125 (290)
T ss_dssp GGGTTCTTCCEEECTTSCCCEEECC--SCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTT
T ss_pred HHhhcCCCCCEEECCCCccCcccCC--CCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCC
Confidence 4456788999999999999976443 88999999999999999 8888775 78999999999999877788999999
Q ss_pred cccccccccccCCCCCchhcCCCCCceEeccCCcccccCCCCCCCCCCCceeeccccccccccccccc-cccceEEccCC
Q 004994 143 LLDLSLNNNHLNGGIPDAFHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNNKLSGTLNVLED-LHLIDLNIENN 221 (720)
Q Consensus 143 L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~-~~l~~l~l~~N 221 (720)
|+.|+|++|+|++..+..|..+++|+.|+|++|+|++..+..+..+++|+.|+|++|+|+..+..+.. ..|+.|+|++|
T Consensus 126 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~ip~~~~~~~~L~~l~L~~N 205 (290)
T 1p9a_G 126 LQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLYTIPKGFFGSHLLPFAFLHGN 205 (290)
T ss_dssp CCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCCCSEEECCSC
T ss_pred CCEEECCCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCCccChhhcccccCCeEEeCCC
Confidence 99999999999987777889999999999999999955555678899999999999999987765544 45999999999
Q ss_pred cCcc
Q 004994 222 LFSG 225 (720)
Q Consensus 222 ~l~g 225 (720)
.+..
T Consensus 206 p~~C 209 (290)
T 1p9a_G 206 PWLC 209 (290)
T ss_dssp CBCC
T ss_pred CccC
Confidence 9873
No 311
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.76 E-value=5.8e-19 Score=200.07 Aligned_cols=182 Identities=16% Similarity=0.180 Sum_probs=151.8
Q ss_pred CCceeEeec-------------CceeEEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCCCcc--ccCcEEEecC
Q 004994 62 SWQGVFCVF-------------SNVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSNLP--VTVRNFSLSG 126 (720)
Q Consensus 62 ~w~gv~c~~-------------~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~--~~L~~L~Ls~ 126 (720)
.|.|+ |+. ++|+.|+|++|++++..|..|..+++|++|+|++|++++..|..+. .+|++|+|++
T Consensus 5 ~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~ 83 (549)
T 2z81_A 5 DASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSD 83 (549)
T ss_dssp CTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTT
T ss_pred CCCce-EECCCCccccccccCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCC
Confidence 78887 764 3799999999999998899999999999999999999987777776 7899999999
Q ss_pred CcCCCCCcchhhcccccccccccccccCC-CCCchhcCCCCCceEeccCCcccccCC-CCCCCCCCCceeeccccccccc
Q 004994 127 NQLTGSIPESLSRLTQLLDLSLNNNHLNG-GIPDAFHQFTGLINFDLSANNLTGQLP-PSTRNLSSLYSLHLQNNKLSGT 204 (720)
Q Consensus 127 N~l~g~~p~~l~~l~~L~~L~l~~N~l~g-~~p~~~~~l~~L~~L~ls~N~l~g~~p-~~~~~l~~L~~L~l~~N~l~~~ 204 (720)
|++++..|..|+++++|++|+|++|++++ .+|..|+++++|++|+|++|++.+.+| ..+.++++|+.|+|++|.+++.
T Consensus 84 n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~ 163 (549)
T 2z81_A 84 NHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNY 163 (549)
T ss_dssp SCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEE
T ss_pred CccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCccccc
Confidence 99998888789999999999999999986 467889999999999999999555665 5799999999999999999986
Q ss_pred cc-cccccc-cceEEccCCcCcccCCcc----cCCCccccccCccCC
Q 004994 205 LN-VLEDLH-LIDLNIENNLFSGPIPEK----LLSIPNFRKDGNPFN 245 (720)
Q Consensus 205 ~~-~~~~~~-l~~l~l~~N~l~g~~p~~----~~~l~~l~~~~n~~~ 245 (720)
++ .+..+. |+.|++++|.+. .+|.. +.++..|.+.+|.+.
T Consensus 164 ~~~~l~~l~~L~~L~l~~n~~~-~~~~~~~~~l~~L~~L~L~~n~l~ 209 (549)
T 2z81_A 164 QSQSLKSIRDIHHLTLHLSESA-FLLEIFADILSSVRYLELRDTNLA 209 (549)
T ss_dssp CTTTTTTCSEEEEEEEECSBST-THHHHHHHSTTTBSEEEEESCBCT
T ss_pred ChhhhhccccCceEecccCccc-ccchhhHhhcccccEEEccCCccc
Confidence 54 455555 899999999886 45543 345555556666543
No 312
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.76 E-value=2.2e-18 Score=200.59 Aligned_cols=168 Identities=23% Similarity=0.269 Sum_probs=149.8
Q ss_pred CceeEEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCCCcc--ccCcEEEecCCcCCCCCcchhhcccccccccc
Q 004994 71 SNVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSNLP--VTVRNFSLSGNQLTGSIPESLSRLTQLLDLSL 148 (720)
Q Consensus 71 ~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~--~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~l 148 (720)
++++.|+|++|++++..+..|+++++|++|+|++|++++..|..+. .+|++|+|++|++++..+..|+++++|++|+|
T Consensus 25 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 104 (680)
T 1ziw_A 25 TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHL 104 (680)
T ss_dssp TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEEC
T ss_pred CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEEC
Confidence 4799999999999998888999999999999999999987787776 79999999999999655567999999999999
Q ss_pred cccccCCCCCchhcCCCCCceEeccCCcccccCCCCCCCCCCCceeecccccccccccc-c---cccccceEEccCCcCc
Q 004994 149 NNNHLNGGIPDAFHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNNKLSGTLNV-L---EDLHLIDLNIENNLFS 224 (720)
Q Consensus 149 ~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~---~~~~l~~l~l~~N~l~ 224 (720)
++|++++..|..|+++++|++|+|++|.+++..|..+.++++|+.|+|++|++++.++. + ....|+.|++++|.++
T Consensus 105 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~ 184 (680)
T 1ziw_A 105 MSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIK 184 (680)
T ss_dssp CSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCCC
T ss_pred CCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCccc
Confidence 99999987788999999999999999999988899999999999999999999988753 2 2345999999999999
Q ss_pred ccCCcccCCCcccc
Q 004994 225 GPIPEKLLSIPNFR 238 (720)
Q Consensus 225 g~~p~~~~~l~~l~ 238 (720)
+..|..+..+++|+
T Consensus 185 ~~~~~~~~~l~~L~ 198 (680)
T 1ziw_A 185 EFSPGCFHAIGRLF 198 (680)
T ss_dssp CBCTTGGGGSSEEC
T ss_pred ccChhhhhhhhhhh
Confidence 98888776655543
No 313
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.76 E-value=1.7e-18 Score=187.47 Aligned_cols=169 Identities=18% Similarity=0.228 Sum_probs=110.1
Q ss_pred eEeecCceeEEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCCCc-c--ccCcEEEecCCcCCCCCcchhhcccc
Q 004994 66 VFCVFSNVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSNL-P--VTVRNFSLSGNQLTGSIPESLSRLTQ 142 (720)
Q Consensus 66 v~c~~~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~-~--~~L~~L~Ls~N~l~g~~p~~l~~l~~ 142 (720)
.+..+++|+.|+|++|++++..|..|+.+++|++|+|++|+|+ .+|..+ . .+|+.|+|++|++++..|..|.++++
T Consensus 88 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 166 (390)
T 3o6n_A 88 AFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTS 166 (390)
T ss_dssp TTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTT
T ss_pred hccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccC-cCCHHHhcCCCCCcEEECCCCccCccChhhccCCCC
Confidence 3445566777777777777666666777777777777777776 455443 2 56777777777776666666666666
Q ss_pred cccccccccccCCCC-----------------------------------------------------------CchhcC
Q 004994 143 LLDLSLNNNHLNGGI-----------------------------------------------------------PDAFHQ 163 (720)
Q Consensus 143 L~~L~l~~N~l~g~~-----------------------------------------------------------p~~~~~ 163 (720)
|+.|+|++|++++.. +..+..
T Consensus 167 L~~L~l~~n~l~~~~~~~l~~L~~L~l~~n~l~~~~~~~~L~~L~l~~n~l~~~~~~~~~~L~~L~l~~n~l~~~~~l~~ 246 (390)
T 3o6n_A 167 LQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGPVNVELTILKLQHNNLTDTAWLLN 246 (390)
T ss_dssp CCEEECCSSCCSBCCGGGCTTCSEEECCSSCCSEEECCSSCSEEECCSSCCCEEECCCCSSCCEEECCSSCCCCCGGGGG
T ss_pred CCEEECCCCcCCccccccccccceeecccccccccCCCCcceEEECCCCeeeeccccccccccEEECCCCCCcccHHHcC
Confidence 666666666655321 123455
Q ss_pred CCCCceEeccCCcccccCCCCCCCCCCCceeecccccccccccccccc-ccceEEccCCcCcccCCcccCCCcc
Q 004994 164 FTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNNKLSGTLNVLEDL-HLIDLNIENNLFSGPIPEKLLSIPN 236 (720)
Q Consensus 164 l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~-~l~~l~l~~N~l~g~~p~~~~~l~~ 236 (720)
+++|+.|+|++|.+++..|..+..+++|+.|+|++|++++.+.....+ .|+.|+|++|+++ .+|..+..+++
T Consensus 247 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~ 319 (390)
T 3o6n_A 247 YPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVALNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDR 319 (390)
T ss_dssp CTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCEEECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTT
T ss_pred CCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcccCcccCCCCCCCEEECCCCcce-ecCccccccCc
Confidence 677777788888877766777777888888888888877765444433 3777777777777 45554433333
No 314
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.76 E-value=1.9e-19 Score=209.68 Aligned_cols=202 Identities=23% Similarity=0.198 Sum_probs=120.7
Q ss_pred CCCHHHHHHHHHHHHhcCC---CCCCCccCCCCCCCCCCCceeEeecCceeEEEecCCccc------------------c
Q 004994 27 VTDPRDVMALNSLYISLNF---PPLEKWLSFGGDPCGDSWQGVFCVFSNVTEIRLTGMNLG------------------G 85 (720)
Q Consensus 27 ~~~~~~~~al~~~~~~l~~---~~~~~w~~~~~~~c~~~w~gv~c~~~~l~~l~L~~n~l~------------------~ 85 (720)
+....++.+|++++.++.. .....|... ..++. .|.++.++.++++.|+|.+|.+. +
T Consensus 128 s~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~s~~~~~~l~L~~n~~~~~~~~~l~~l~Ls~~~i~~ 205 (727)
T 4b8c_D 128 SLVDCTKQALMEMADTLTDSKTAKKQQPTGD-STPSG-TATNSAVSTPLTPKIELFANGKDEANQALLQHKKLSQYSIDE 205 (727)
T ss_dssp ----CCCHHHHHHHHHHHHHHTTC--------------------------------------------------------
T ss_pred hccccchhhhhhhhhhcccccCcccCCCcCC-CCccc-cCCCceecCCccceEEeeCCCCCcchhhHhhcCccCcccccC
Confidence 3455688999999877732 234456432 23332 68888777666666655444433 2
Q ss_pred ---------cCCcCcCCCCCccEEeccCCcccccCCCCcc--ccCcEEEecCCcCCCCCcchhhcccccccccccccccC
Q 004994 86 ---------VLADTLGDLESVINIDLSNNHIGGSIPSNLP--VTVRNFSLSGNQLTGSIPESLSRLTQLLDLSLNNNHLN 154 (720)
Q Consensus 86 ---------~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~--~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~l~~N~l~ 154 (720)
..+..+..+++|+.|+|++|+|. .+|..+. .+|+.|+|++|+|+ .+|..|++|++|+.|+|++|+|+
T Consensus 206 ~~~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~ 283 (727)
T 4b8c_D 206 DDDIENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT 283 (727)
T ss_dssp ----------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS
T ss_pred ccccccceecChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC
Confidence 23566778888888888888888 7777665 67888888888888 88888888888888888888888
Q ss_pred CCCCchhcCCCCCceEeccCCcccccCCCCCCCCCCCceeecccccccccccc-ccccc--cceEEccCCcCcccCCccc
Q 004994 155 GGIPDAFHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNNKLSGTLNV-LEDLH--LIDLNIENNLFSGPIPEKL 231 (720)
Q Consensus 155 g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~--l~~l~l~~N~l~g~~p~~~ 231 (720)
.+|..|++|++|++|+|++|.|+ .+|..|++|++|+.|+|++|.|++.++. +.... +..|+|++|.++|.+|..+
T Consensus 284 -~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~l 361 (727)
T 4b8c_D 284 -SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHER 361 (727)
T ss_dssp -SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC-
T ss_pred -ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCcccc
Confidence 77888888888888888888887 7888888888888888888888877653 33222 3456788888888888766
Q ss_pred CCC
Q 004994 232 LSI 234 (720)
Q Consensus 232 ~~l 234 (720)
..+
T Consensus 362 ~~l 364 (727)
T 4b8c_D 362 RFI 364 (727)
T ss_dssp ---
T ss_pred cee
Confidence 543
No 315
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.76 E-value=1.3e-18 Score=174.97 Aligned_cols=175 Identities=16% Similarity=0.185 Sum_probs=146.8
Q ss_pred eeEeecCceeEEEecCCc-ccccCCcCcCCCCCccEEeccC-CcccccCCCCcc--ccCcEEEecCCcCCCCCcchhhcc
Q 004994 65 GVFCVFSNVTEIRLTGMN-LGGVLADTLGDLESVINIDLSN-NHIGGSIPSNLP--VTVRNFSLSGNQLTGSIPESLSRL 140 (720)
Q Consensus 65 gv~c~~~~l~~l~L~~n~-l~~~~~~~~~~l~~L~~L~L~~-N~l~g~ip~~~~--~~L~~L~Ls~N~l~g~~p~~l~~l 140 (720)
+.+..+++|+.|+|++|+ +++..+..|..+++|++|+|++ |+|++..|..+. .+|+.|+|++|++++ +|. |.++
T Consensus 49 ~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l 126 (239)
T 2xwt_C 49 HAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKV 126 (239)
T ss_dssp TTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTC
T ss_pred HHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-cccc
Confidence 345567899999999997 8887778999999999999999 999955555664 689999999999995 776 8889
Q ss_pred cccc---ccccccc-ccCCCCCchhcCCCCCc-eEeccCCcccccCCCCCCCCCCCceeeccccc-cccccc-ccccc--
Q 004994 141 TQLL---DLSLNNN-HLNGGIPDAFHQFTGLI-NFDLSANNLTGQLPPSTRNLSSLYSLHLQNNK-LSGTLN-VLEDL-- 211 (720)
Q Consensus 141 ~~L~---~L~l~~N-~l~g~~p~~~~~l~~L~-~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~-l~~~~~-~~~~~-- 211 (720)
++|+ .|++++| ++++..+..|.++++|+ .|++++|+++ .+|......++|+.|+|++|+ +++.++ .+..+
T Consensus 127 ~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~~~L~~L~L~~n~~l~~i~~~~~~~l~~ 205 (239)
T 2xwt_C 127 YSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYS 205 (239)
T ss_dssp CBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTTTTTCEEEEEECTTCTTCCEECTTTTTTCSB
T ss_pred cccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhhcCCCCCCEEEcCCCCCcccCCHHHhhcccc
Confidence 9988 9999999 99977777899999999 9999999999 777665555899999999995 998764 45665
Q ss_pred ccceEEccCCcCcccCCcccCCCccccccCc
Q 004994 212 HLIDLNIENNLFSGPIPEKLLSIPNFRKDGN 242 (720)
Q Consensus 212 ~l~~l~l~~N~l~g~~p~~~~~l~~l~~~~n 242 (720)
.|+.|++++|+|++..+..+.+++.|.+.++
T Consensus 206 ~L~~L~l~~N~l~~l~~~~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 206 GPSLLDVSQTSVTALPSKGLEHLKELIARNT 236 (239)
T ss_dssp CCSEEECTTCCCCCCCCTTCTTCSEEECTTC
T ss_pred CCcEEECCCCccccCChhHhccCceeeccCc
Confidence 5999999999999655555777777766544
No 316
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.76 E-value=6.2e-19 Score=196.21 Aligned_cols=168 Identities=20% Similarity=0.171 Sum_probs=137.1
Q ss_pred cCceeEEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCCCccccCcEEEecCCcCCCCCcchhhccccccccccc
Q 004994 70 FSNVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSNLPVTVRNFSLSGNQLTGSIPESLSRLTQLLDLSLN 149 (720)
Q Consensus 70 ~~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~l~ 149 (720)
.++|+.|+|++|++++..|..|+.+++|++|+|++|+|++.+|-.-..+|+.|+|++|.|++.. ..++|+.|+|+
T Consensus 33 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~l~~l~~L~~L~Ls~N~l~~l~-----~~~~L~~L~L~ 107 (487)
T 3oja_A 33 AWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLDLESLSTLRTLDLNNNYVQELL-----VGPSIETLHAA 107 (487)
T ss_dssp GGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEECTTCTTCCEEECCSSEEEEEE-----ECTTCCEEECC
T ss_pred CCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcccccCCCCCEEEecCCcCCCCC-----CCCCcCEEECc
Confidence 3489999999999999888999999999999999999998777222279999999999999543 23899999999
Q ss_pred ccccCCCCCchhcCCCCCceEeccCCcccccCCCCCCCCCCCceeeccccccccccc-ccc-cc-ccceEEccCCcCccc
Q 004994 150 NNHLNGGIPDAFHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNNKLSGTLN-VLE-DL-HLIDLNIENNLFSGP 226 (720)
Q Consensus 150 ~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~-~~-~l~~l~l~~N~l~g~ 226 (720)
+|.|++..+. .+++|+.|+|++|.|++..|..++++++|+.|+|++|.|++.++ .+. .+ .|+.|+|++|.|++.
T Consensus 108 ~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~ 184 (487)
T 3oja_A 108 NNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV 184 (487)
T ss_dssp SSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE
T ss_pred CCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc
Confidence 9999976554 46889999999999998889999999999999999999999764 343 34 499999999999976
Q ss_pred CCcc-cCCCccccccCccCC
Q 004994 227 IPEK-LLSIPNFRKDGNPFN 245 (720)
Q Consensus 227 ~p~~-~~~l~~l~~~~n~~~ 245 (720)
.+.. +.+|..|.+.+|.+.
T Consensus 185 ~~~~~l~~L~~L~Ls~N~l~ 204 (487)
T 3oja_A 185 KGQVVFAKLKTLDLSSNKLA 204 (487)
T ss_dssp ECCCCCTTCCEEECCSSCCC
T ss_pred cccccCCCCCEEECCCCCCC
Confidence 4322 334444445555443
No 317
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.75 E-value=1.2e-18 Score=177.16 Aligned_cols=138 Identities=21% Similarity=0.184 Sum_probs=105.1
Q ss_pred CCCCCeeccCCCceEEEEEe-CCCcE--EEEEEeccccccc----------------------ccHHHHHHHHHHHHccC
Q 004994 442 FSEGNFIGEGLLGSVYKAEL-PGGKL--LAVKKLSNTVSQR----------------------QTDEEFLELASTISRLR 496 (720)
Q Consensus 442 ~~~~~~lg~G~~g~Vy~~~~-~~g~~--vavK~l~~~~~~~----------------------~~~~~~~~e~~~l~~l~ 496 (720)
|...+.||+|+||.||+|.. .+|+. ||||+++...... .....+.+|++.+.+++
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 45678999999999999976 78988 9999975431110 11236789999999998
Q ss_pred CCce--eEEEeEeccCCeEEEEEeeCCC-C----CHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHH-hcCCCCeee
Q 004994 497 HGNI--VELIGYCNEHGQHLLVYDYGGN-C----TLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQ-EVCEPPIVH 568 (720)
Q Consensus 497 H~ni--v~l~~~~~~~~~~~lv~e~~~~-g----sL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH-~~~~~~ivH 568 (720)
|+++ ..++++ +..++||||+++ | +|.++... .++.....++.+++.||.||| .. +|||
T Consensus 129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~-------~~~~~~~~i~~qi~~~l~~lH~~~---givH 194 (258)
T 1zth_A 129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE-------LKELDVEGIFNDVVENVKRLYQEA---ELVH 194 (258)
T ss_dssp HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG-------GGGSCHHHHHHHHHHHHHHHHHTS---CEEC
T ss_pred hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc-------cChHHHHHHHHHHHHHHHHHHHHC---CEEe
Confidence 8754 444443 356899999952 4 66665421 123456789999999999999 66 9999
Q ss_pred cCCCCCCeEEcCCCCeEEccccCCCCC
Q 004994 569 GNFKSSNILLDEKLIVRVSDCGLAPLL 595 (720)
Q Consensus 569 rDlkp~NiLl~~~~~~kl~DFGla~~~ 595 (720)
|||||+|||+++ .++|+|||+|...
T Consensus 195 rDlkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 195 ADLSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp SSCSTTSEEESS--SEEECCCTTCEET
T ss_pred CCCCHHHEEEcC--cEEEEECcccccC
Confidence 999999999998 9999999999754
No 318
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.75 E-value=3.1e-18 Score=194.63 Aligned_cols=174 Identities=18% Similarity=0.217 Sum_probs=110.3
Q ss_pred ceeEEEecCCcccccCCcCc-----CCCCC--------------------------ccEEeccCCcccccCCCCccccCc
Q 004994 72 NVTEIRLTGMNLGGVLADTL-----GDLES--------------------------VINIDLSNNHIGGSIPSNLPVTVR 120 (720)
Q Consensus 72 ~l~~l~L~~n~l~~~~~~~~-----~~l~~--------------------------L~~L~L~~N~l~g~ip~~~~~~L~ 120 (720)
+|+.|++++|+++|.+|..+ ..++. |+.|++++|++.......-..+|+
T Consensus 277 ~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~l~~L~ 356 (562)
T 3a79_B 277 PVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMVCPPSPSSFT 356 (562)
T ss_dssp SEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCC
T ss_pred cccEEEEeccEeeccccchhhhcccccchheehhhcccceeecChhhhhhhhccCcceEEEccCCCcccccCccCCCCce
Confidence 78888888888888888776 44433 344444444443111001125677
Q ss_pred EEEecCCcCCCCCcchhhcccccccccccccccCCC--CCchhcCCCCCceEeccCCcccccCCC-CCCCCCCCceeecc
Q 004994 121 NFSLSGNQLTGSIPESLSRLTQLLDLSLNNNHLNGG--IPDAFHQFTGLINFDLSANNLTGQLPP-STRNLSSLYSLHLQ 197 (720)
Q Consensus 121 ~L~Ls~N~l~g~~p~~l~~l~~L~~L~l~~N~l~g~--~p~~~~~l~~L~~L~ls~N~l~g~~p~-~~~~l~~L~~L~l~ 197 (720)
.|+|++|++++.+|..++++++|+.|+|++|++++. +|..|.++++|+.|+|++|++++.+|. .+..+++|+.|+|+
T Consensus 357 ~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~ 436 (562)
T 3a79_B 357 FLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLS 436 (562)
T ss_dssp EEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECC
T ss_pred EEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECC
Confidence 777777777777777777777777777777777752 245567777777777777777764554 36667777777777
Q ss_pred ccccccccccccccccceEEccCCcCcccCCcccCCCccccccCccCCC
Q 004994 198 NNKLSGTLNVLEDLHLIDLNIENNLFSGPIPEKLLSIPNFRKDGNPFNT 246 (720)
Q Consensus 198 ~N~l~~~~~~~~~~~l~~l~l~~N~l~g~~p~~~~~l~~l~~~~n~~~~ 246 (720)
+|+|++.++..-...|+.|+|++|+|+ .+|..+..+++|+..+...|.
T Consensus 437 ~n~l~~~~~~~l~~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~ 484 (562)
T 3a79_B 437 SNMLTGSVFRCLPPKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQ 484 (562)
T ss_dssp SSCCCGGGGSSCCTTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSC
T ss_pred CCCCCcchhhhhcCcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCC
Confidence 777766543211134777777777777 666666566655554444443
No 319
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.75 E-value=2.2e-18 Score=193.91 Aligned_cols=174 Identities=21% Similarity=0.247 Sum_probs=133.8
Q ss_pred CceeEEEecCCcccccCCcCc-----CCCCCccEEeccCCcccccCCC----------------------------Cccc
Q 004994 71 SNVTEIRLTGMNLGGVLADTL-----GDLESVINIDLSNNHIGGSIPS----------------------------NLPV 117 (720)
Q Consensus 71 ~~l~~l~L~~n~l~~~~~~~~-----~~l~~L~~L~L~~N~l~g~ip~----------------------------~~~~ 117 (720)
++|+.|+|++|+++|.+|..+ +.+++|+.+++++|.+ .+|. .-..
T Consensus 247 ~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~l~ 324 (520)
T 2z7x_B 247 TTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKIS 324 (520)
T ss_dssp SSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCC
T ss_pred CcccEEEeecccccCccccchhhcccccCceeEeccccccce--ecchhhhhcccccCceeEEEcCCCccccccchhhCC
Confidence 378888888888888888877 7777777777777766 3441 1225
Q ss_pred cCcEEEecCCcCCCCCcchhhcccccccccccccccCC--CCCchhcCCCCCceEeccCCcccccCCCC-CCCCCCCcee
Q 004994 118 TVRNFSLSGNQLTGSIPESLSRLTQLLDLSLNNNHLNG--GIPDAFHQFTGLINFDLSANNLTGQLPPS-TRNLSSLYSL 194 (720)
Q Consensus 118 ~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~l~~N~l~g--~~p~~~~~l~~L~~L~ls~N~l~g~~p~~-~~~l~~L~~L 194 (720)
+|+.|+|++|++++.+|..++++++|+.|+|++|++++ .+|..|.++++|+.|+|++|++++.+|.. +..+++|+.|
T Consensus 325 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L 404 (520)
T 2z7x_B 325 PFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSL 404 (520)
T ss_dssp CCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEE
T ss_pred cccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEE
Confidence 78899999999998888888899999999999999986 56677888999999999999998757654 7788899999
Q ss_pred eccccccccccccccccccceEEccCCcCcccCCcccCCCccccccCccCCCc
Q 004994 195 HLQNNKLSGTLNVLEDLHLIDLNIENNLFSGPIPEKLLSIPNFRKDGNPFNTT 247 (720)
Q Consensus 195 ~l~~N~l~~~~~~~~~~~l~~l~l~~N~l~g~~p~~~~~l~~l~~~~n~~~~~ 247 (720)
+|++|++++..+..-...|+.|++++|+|+ .+|..+..+++|+..+...|..
T Consensus 405 ~Ls~N~l~~~~~~~l~~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l 456 (520)
T 2z7x_B 405 NMSSNILTDTIFRCLPPRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQL 456 (520)
T ss_dssp ECCSSCCCGGGGGSCCTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCC
T ss_pred ECcCCCCCcchhhhhcccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcC
Confidence 999999887654322245888999999988 7888776776666555544433
No 320
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.75 E-value=3.1e-18 Score=199.33 Aligned_cols=183 Identities=22% Similarity=0.268 Sum_probs=117.7
Q ss_pred eEeecCceeEEEecCCcccccCC-cCcCCCCCccEEeccCCccccc--------------------------CCCCcc--
Q 004994 66 VFCVFSNVTEIRLTGMNLGGVLA-DTLGDLESVINIDLSNNHIGGS--------------------------IPSNLP-- 116 (720)
Q Consensus 66 v~c~~~~l~~l~L~~n~l~~~~~-~~~~~l~~L~~L~L~~N~l~g~--------------------------ip~~~~-- 116 (720)
.++.+++|+.|+|++|.+++.+| ..|..+++|++|+|++|++.+. +|..+.
T Consensus 400 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l 479 (680)
T 1ziw_A 400 AFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPL 479 (680)
T ss_dssp TTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTC
T ss_pred hhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccC
Confidence 34456677777777777776555 5677777777777777776543 344443
Q ss_pred ccCcEEEecCCcCCCCCcchhhcccccccccccccccCCCC--------CchhcCCCCCceEeccCCcccccCCC-CCCC
Q 004994 117 VTVRNFSLSGNQLTGSIPESLSRLTQLLDLSLNNNHLNGGI--------PDAFHQFTGLINFDLSANNLTGQLPP-STRN 187 (720)
Q Consensus 117 ~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~l~~N~l~g~~--------p~~~~~l~~L~~L~ls~N~l~g~~p~-~~~~ 187 (720)
.+|+.|+|++|++++..|..|.++++|+.|+|++|++++.. +..|.++++|+.|+|++|+|+ .+|. .|.+
T Consensus 480 ~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~-~i~~~~~~~ 558 (680)
T 1ziw_A 480 RNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFD-EIPVEVFKD 558 (680)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCC-CCCTTTTTT
T ss_pred CCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCC-CCCHHHccc
Confidence 45666666666666555555666666777777777665421 122566677777777777776 4443 4677
Q ss_pred CCCCceeecccccccccccc-cccc-ccceEEccCCcCcccCCc----ccCCCccccccCccCCCccc
Q 004994 188 LSSLYSLHLQNNKLSGTLNV-LEDL-HLIDLNIENNLFSGPIPE----KLLSIPNFRKDGNPFNTTVI 249 (720)
Q Consensus 188 l~~L~~L~l~~N~l~~~~~~-~~~~-~l~~l~l~~N~l~g~~p~----~~~~l~~l~~~~n~~~~~~~ 249 (720)
+++|+.|+|++|+|++.++. +..+ .|+.|+|++|+|++..|. .+.++..+.+.+|+|.|.|.
T Consensus 559 l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~ 626 (680)
T 1ziw_A 559 LFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCE 626 (680)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCC
T ss_pred ccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCc
Confidence 77777777777777766543 3343 377777777777765554 24456666677777777664
No 321
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.74 E-value=2.6e-18 Score=183.84 Aligned_cols=167 Identities=26% Similarity=0.245 Sum_probs=142.2
Q ss_pred CCCCCCceeEeec-----------CceeEEEecCCcccccCCcCcC-CCCCccEEeccCCcccccCCCCcc--ccCcEEE
Q 004994 58 PCGDSWQGVFCVF-----------SNVTEIRLTGMNLGGVLADTLG-DLESVINIDLSNNHIGGSIPSNLP--VTVRNFS 123 (720)
Q Consensus 58 ~c~~~w~gv~c~~-----------~~l~~l~L~~n~l~~~~~~~~~-~l~~L~~L~L~~N~l~g~ip~~~~--~~L~~L~ 123 (720)
.|.|.+..+.|.. ..++.|+|++|+|++..+..+. .+++|+.|+|++|+|++..|..|. .+|+.|+
T Consensus 15 ~C~C~~~~l~c~~~~l~~iP~~~~~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~ 94 (361)
T 2xot_A 15 NCLCASNILSCSKQQLPNVPQSLPSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLD 94 (361)
T ss_dssp TCEEETTEEECCSSCCSSCCSSCCTTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred CCEECCCEEEeCCCCcCccCccCCCCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEE
Confidence 3656677788853 3478999999999998888888 999999999999999966666675 7899999
Q ss_pred ecCCcCCCCCcchhhcccccccccccccccCCCCCchhcCCCCCceEeccCCcccccCCCC-C---CCCCCCceeecccc
Q 004994 124 LSGNQLTGSIPESLSRLTQLLDLSLNNNHLNGGIPDAFHQFTGLINFDLSANNLTGQLPPS-T---RNLSSLYSLHLQNN 199 (720)
Q Consensus 124 Ls~N~l~g~~p~~l~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~-~---~~l~~L~~L~l~~N 199 (720)
|++|+|++..+..|.++++|+.|+|++|+|++..|..|.++++|+.|+|++|+|+ .+|.. + ..+++|+.|+|++|
T Consensus 95 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~~~~l~~L~~L~L~~N 173 (361)
T 2xot_A 95 LSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQIS-RFPVELIKDGNKLPKLMLLDLSSN 173 (361)
T ss_dssp CCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCC-SCCGGGTC----CTTCCEEECCSS
T ss_pred CCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCC-eeCHHHhcCcccCCcCCEEECCCC
Confidence 9999999877788999999999999999999888999999999999999999999 46654 4 67999999999999
Q ss_pred ccccccc-cccccc---cceEEccCCcCcc
Q 004994 200 KLSGTLN-VLEDLH---LIDLNIENNLFSG 225 (720)
Q Consensus 200 ~l~~~~~-~~~~~~---l~~l~l~~N~l~g 225 (720)
+|++.+. .+..+. ++.|+|++|.+..
T Consensus 174 ~l~~l~~~~~~~l~~~~l~~l~l~~N~~~C 203 (361)
T 2xot_A 174 KLKKLPLTDLQKLPAWVKNGLYLHNNPLEC 203 (361)
T ss_dssp CCCCCCHHHHHHSCHHHHTTEECCSSCEEC
T ss_pred CCCccCHHHhhhccHhhcceEEecCCCccC
Confidence 9998763 344443 5889999999873
No 322
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.74 E-value=4e-18 Score=202.90 Aligned_cols=175 Identities=19% Similarity=0.202 Sum_probs=152.7
Q ss_pred CCCceeEeecCceeEEEecCCcccccCCcCcCCCCCccEEeccCCcccccC-CCCcc--ccCcEEEecCCcCCCCCcchh
Q 004994 61 DSWQGVFCVFSNVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSI-PSNLP--VTVRNFSLSGNQLTGSIPESL 137 (720)
Q Consensus 61 ~~w~gv~c~~~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~i-p~~~~--~~L~~L~Ls~N~l~g~~p~~l 137 (720)
..|..|-+..++|+.|+|++|.+++..|..|.++++|++|+|++|.+.+.+ |..+. .+|++|+|++|++++..|..|
T Consensus 14 ~~L~~vP~lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~ 93 (844)
T 3j0a_A 14 CNLTQVPQVLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAF 93 (844)
T ss_dssp CCSSCCCSSCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSS
T ss_pred CCCCCCCCCCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHc
Confidence 357777774578999999999999999999999999999999999887788 56665 789999999999999999999
Q ss_pred hcccccccccccccccCCCCCch--hcCCCCCceEeccCCcccccCC-CCCCCCCCCceeeccccccccccc-cccc---
Q 004994 138 SRLTQLLDLSLNNNHLNGGIPDA--FHQFTGLINFDLSANNLTGQLP-PSTRNLSSLYSLHLQNNKLSGTLN-VLED--- 210 (720)
Q Consensus 138 ~~l~~L~~L~l~~N~l~g~~p~~--~~~l~~L~~L~ls~N~l~g~~p-~~~~~l~~L~~L~l~~N~l~~~~~-~~~~--- 210 (720)
+++++|++|+|++|.+++.+|.. |.++++|++|+|++|.+++..+ ..|+++++|+.|+|++|.+++..+ .+..
T Consensus 94 ~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~ 173 (844)
T 3j0a_A 94 QGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQG 173 (844)
T ss_dssp CSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHH
T ss_pred cCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccC
Confidence 99999999999999999877766 9999999999999999997655 579999999999999999988653 3433
Q ss_pred cccceEEccCCcCcccCCcccCCCc
Q 004994 211 LHLIDLNIENNLFSGPIPEKLLSIP 235 (720)
Q Consensus 211 ~~l~~l~l~~N~l~g~~p~~~~~l~ 235 (720)
..|+.|++++|.+.+.+|..+..+.
T Consensus 174 ~~L~~L~L~~n~l~~~~~~~~~~~~ 198 (844)
T 3j0a_A 174 KTLSFFSLAANSLYSRVSVDWGKCM 198 (844)
T ss_dssp CSSCCCEECCSBSCCCCCCCCCSSS
T ss_pred CccceEECCCCccccccccchhhcC
Confidence 4599999999999998887765543
No 323
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.74 E-value=1.9e-18 Score=181.49 Aligned_cols=173 Identities=15% Similarity=0.082 Sum_probs=112.7
Q ss_pred CceeEeecCceeEEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCCCccccCcEEEecCCcCCCCCcchhhcccc
Q 004994 63 WQGVFCVFSNVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSNLPVTVRNFSLSGNQLTGSIPESLSRLTQ 142 (720)
Q Consensus 63 w~gv~c~~~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~~~L~~L~Ls~N~l~g~~p~~l~~l~~ 142 (720)
....++.+++|+.|+|++|++++..+ +..+++|++|+|++|+|++ +|.. .+|+.|+|++|++++..+.. +++
T Consensus 50 ~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~-l~~~--~~L~~L~l~~n~l~~~~~~~---~~~ 121 (317)
T 3o53_A 50 SAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQE-LLVG--PSIETLHAANNNISRVSCSR---GQG 121 (317)
T ss_dssp CHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEE-EEEC--TTCCEEECCSSCCSEEEECC---CSS
T ss_pred CHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCcccc-ccCC--CCcCEEECCCCccCCcCccc---cCC
Confidence 33556778889999999999987665 8889999999999999884 3321 56777777777776444332 456
Q ss_pred cccccccccccCCCCCchhcCCCCCceEeccCCcccccCCCCC-CCCCCCceeeccccccccccccccccccceEEccCC
Q 004994 143 LLDLSLNNNHLNGGIPDAFHQFTGLINFDLSANNLTGQLPPST-RNLSSLYSLHLQNNKLSGTLNVLEDLHLIDLNIENN 221 (720)
Q Consensus 143 L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~-~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~l~l~~N 221 (720)
|+.|+|++|++++..|..|..+++|+.|+|++|.+++..|..+ ..+++|+.|+|++|.|++.........|+.|+|++|
T Consensus 122 L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~l~~L~~L~Ls~N 201 (317)
T 3o53_A 122 KKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKGQVVFAKLKTLDLSSN 201 (317)
T ss_dssp CEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEECCCCCTTCCEEECCSS
T ss_pred CCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCcccccccccccCCEEECCCC
Confidence 6777777777766556666667777777777777765555554 356677777777777666543333334667777777
Q ss_pred cCcccCCcccCCCccccccCccC
Q 004994 222 LFSGPIPEKLLSIPNFRKDGNPF 244 (720)
Q Consensus 222 ~l~g~~p~~~~~l~~l~~~~n~~ 244 (720)
++++ +|..+..+++|+..+...
T Consensus 202 ~l~~-l~~~~~~l~~L~~L~L~~ 223 (317)
T 3o53_A 202 KLAF-MGPEFQSAAGVTWISLRN 223 (317)
T ss_dssp CCCE-ECGGGGGGTTCSEEECTT
T ss_pred cCCc-chhhhcccCcccEEECcC
Confidence 7764 344455544444433333
No 324
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.74 E-value=2.3e-18 Score=197.56 Aligned_cols=167 Identities=19% Similarity=0.171 Sum_probs=76.0
Q ss_pred cCceeEEEecCCcccccCCcCcCCCCCccEEeccCCccccc--CCCCcc--ccCcEEEecCCcCCCCCcchhhccccccc
Q 004994 70 FSNVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGS--IPSNLP--VTVRNFSLSGNQLTGSIPESLSRLTQLLD 145 (720)
Q Consensus 70 ~~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~--ip~~~~--~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~ 145 (720)
+++|+.|+|++|...+.+ .+..+++|++|+|++|++++. +|..+. .+|+.|+|++|.++ .+|..+.++++|+.
T Consensus 327 l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~-~~~~~~~~l~~L~~ 403 (606)
T 3vq2_A 327 LPFLKSLTLTMNKGSISF--KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAI-IMSANFMGLEELQH 403 (606)
T ss_dssp CSSCCEEEEESCSSCEEC--CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEE-EECCCCTTCTTCCE
T ss_pred CCccceeeccCCcCccch--hhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCccc-cchhhccCCCCCCe
Confidence 344455555554333322 344445555555555554433 132222 34555555555544 23344444555555
Q ss_pred ccccccccCCCCC-chhcCCCCCceEeccCCcccccCCCCCCCCCCCceeeccccccccc--cccccccc-cceEEccCC
Q 004994 146 LSLNNNHLNGGIP-DAFHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNNKLSGT--LNVLEDLH-LIDLNIENN 221 (720)
Q Consensus 146 L~l~~N~l~g~~p-~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~--~~~~~~~~-l~~l~l~~N 221 (720)
|+|++|++.+..| ..|.++++|+.|++++|.+++.+|..+.++++|+.|+|++|++++. +..+..+. |+.|++++|
T Consensus 404 L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n 483 (606)
T 3vq2_A 404 LDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKC 483 (606)
T ss_dssp EECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTS
T ss_pred eECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCC
Confidence 5555555544444 3444455555555555555444444445555555555555554441 12233332 445555555
Q ss_pred cCcccCCcccCCCccccc
Q 004994 222 LFSGPIPEKLLSIPNFRK 239 (720)
Q Consensus 222 ~l~g~~p~~~~~l~~l~~ 239 (720)
++++..|..+..+++|+.
T Consensus 484 ~l~~~~~~~~~~l~~L~~ 501 (606)
T 3vq2_A 484 QLEQISWGVFDTLHRLQL 501 (606)
T ss_dssp CCCEECTTTTTTCTTCCE
T ss_pred cCCccChhhhcccccCCE
Confidence 555444444444444333
No 325
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.74 E-value=5.6e-18 Score=194.36 Aligned_cols=184 Identities=22% Similarity=0.165 Sum_probs=158.1
Q ss_pred eeEeecCceeEEEecCCcccccCCcC-cCCCCCccEEeccCCcccccC--CCCcc--ccCcEEEecCCcCCCCCcchhhc
Q 004994 65 GVFCVFSNVTEIRLTGMNLGGVLADT-LGDLESVINIDLSNNHIGGSI--PSNLP--VTVRNFSLSGNQLTGSIPESLSR 139 (720)
Q Consensus 65 gv~c~~~~l~~l~L~~n~l~~~~~~~-~~~l~~L~~L~L~~N~l~g~i--p~~~~--~~L~~L~Ls~N~l~g~~p~~l~~ 139 (720)
..+..+++|+.|+|++|.+.+.+|.. +..+++|++|+|++|++++.. |..+. .+|+.|+|++|++++..|..|.+
T Consensus 319 ~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 398 (606)
T 3t6q_A 319 ISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKE 398 (606)
T ss_dssp GCGGGCTTCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTT
T ss_pred hhhhccCcCCEEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcC
Confidence 45667889999999999999877654 999999999999999999765 66665 78999999999999999999999
Q ss_pred ccccccccccccccCCCCCch-hcCCCCCceEeccCCcccccCCCCCCCCCCCceeecccccccccc----ccccccc-c
Q 004994 140 LTQLLDLSLNNNHLNGGIPDA-FHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNNKLSGTL----NVLEDLH-L 213 (720)
Q Consensus 140 l~~L~~L~l~~N~l~g~~p~~-~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~----~~~~~~~-l 213 (720)
+++|+.|+|++|++++..|.. |.++++|+.|+|++|.+++..|..+..+++|+.|+|++|++++.. ..+..+. |
T Consensus 399 l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L 478 (606)
T 3t6q_A 399 CPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRL 478 (606)
T ss_dssp CTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTC
T ss_pred CccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCc
Confidence 999999999999999877654 899999999999999999888999999999999999999998732 2355554 9
Q ss_pred ceEEccCCcCcccCCcccCCCccccccCccCCCcc
Q 004994 214 IDLNIENNLFSGPIPEKLLSIPNFRKDGNPFNTTV 248 (720)
Q Consensus 214 ~~l~l~~N~l~g~~p~~~~~l~~l~~~~n~~~~~~ 248 (720)
+.|++++|++++..|..+..+++|+..+.+.|...
T Consensus 479 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 513 (606)
T 3t6q_A 479 EILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLT 513 (606)
T ss_dssp CEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCC
T ss_pred cEEECCCCccCccChhhhccccCCCEEECCCCccC
Confidence 99999999999998998888888776665555443
No 326
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.73 E-value=8.3e-19 Score=187.20 Aligned_cols=160 Identities=20% Similarity=0.247 Sum_probs=139.0
Q ss_pred eEeecCceeEEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCCC-cc--ccCcEEEecCCcCCCCCcc--hhhcc
Q 004994 66 VFCVFSNVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSN-LP--VTVRNFSLSGNQLTGSIPE--SLSRL 140 (720)
Q Consensus 66 v~c~~~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~-~~--~~L~~L~Ls~N~l~g~~p~--~l~~l 140 (720)
.+..+++|+.|+|++|++++..+..|+.+++|++|+|++|+|+ .+|.. +. .+|++|+|++|+++ .+|. .+.++
T Consensus 71 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~~l 148 (353)
T 2z80_A 71 DLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLS-NLSSSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHL 148 (353)
T ss_dssp TTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCS-SCCHHHHTTCTTCSEEECTTCCCS-SSCSSCSCTTC
T ss_pred HhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCC-cCCHhHhCCCccCCEEECCCCCCc-ccCchhhhccC
Confidence 4566789999999999999988999999999999999999999 55554 44 78999999999999 4554 79999
Q ss_pred ccccccccccc-ccCCCCCchhcCCCCCceEeccCCcccccCCCCCCCCCCCceeeccccccccccccc-ccc-ccceEE
Q 004994 141 TQLLDLSLNNN-HLNGGIPDAFHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNNKLSGTLNVL-EDL-HLIDLN 217 (720)
Q Consensus 141 ~~L~~L~l~~N-~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~-~l~~l~ 217 (720)
++|+.|++++| .+++..|..|.++++|+.|++++|++++..|..+.++++|+.|+|++|+++..+..+ ..+ .|+.|+
T Consensus 149 ~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~ 228 (353)
T 2z80_A 149 TKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLE 228 (353)
T ss_dssp TTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEE
T ss_pred CCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEE
Confidence 99999999999 577666788999999999999999999888999999999999999999997666433 333 489999
Q ss_pred ccCCcCcccC
Q 004994 218 IENNLFSGPI 227 (720)
Q Consensus 218 l~~N~l~g~~ 227 (720)
+++|.+++..
T Consensus 229 L~~n~l~~~~ 238 (353)
T 2z80_A 229 LRDTDLDTFH 238 (353)
T ss_dssp EESCBCTTCC
T ss_pred CCCCcccccc
Confidence 9999998743
No 327
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.73 E-value=6.8e-18 Score=187.82 Aligned_cols=160 Identities=21% Similarity=0.257 Sum_probs=121.4
Q ss_pred eeEeecCceeEEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCCCcc--ccCcEEEecCCcCCCCCcchhhcccc
Q 004994 65 GVFCVFSNVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSNLP--VTVRNFSLSGNQLTGSIPESLSRLTQ 142 (720)
Q Consensus 65 gv~c~~~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~--~~L~~L~Ls~N~l~g~~p~~l~~l~~ 142 (720)
+.+..+++|+.|+|++|++++..+..|..+++|++|+|++|++.+..|..+. .+|+.|+|++|++++..|..|.++++
T Consensus 74 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~ 153 (477)
T 2id5_A 74 GAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNS 153 (477)
T ss_dssp TTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTT
T ss_pred hhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCC
Confidence 4466778899999999999877777788899999999999999877777775 68889999999888888888888888
Q ss_pred cccccccccccCCCCCchhcCCCCCceEeccCCcccccCCCCCCCCCCCceeeccccccccccc--cccccccceEEccC
Q 004994 143 LLDLSLNNNHLNGGIPDAFHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNNKLSGTLN--VLEDLHLIDLNIEN 220 (720)
Q Consensus 143 L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~--~~~~~~l~~l~l~~ 220 (720)
|+.|+|++|++++..+..|.++++|+.|+|++|.+++..+..+..+++|+.|+|++|.+.+.++ .+....|+.|+|++
T Consensus 154 L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~ 233 (477)
T 2id5_A 154 LEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITH 233 (477)
T ss_dssp CCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEES
T ss_pred CCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcC
Confidence 8888888888886666678888888888888888887666677777777777777765544332 11222344444444
Q ss_pred CcCc
Q 004994 221 NLFS 224 (720)
Q Consensus 221 N~l~ 224 (720)
|+++
T Consensus 234 n~l~ 237 (477)
T 2id5_A 234 CNLT 237 (477)
T ss_dssp SCCC
T ss_pred Cccc
Confidence 4444
No 328
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.73 E-value=1.8e-17 Score=162.75 Aligned_cols=165 Identities=20% Similarity=0.243 Sum_probs=135.2
Q ss_pred eEEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCCCcc--ccCcEEEecCCcCCCCCcchhhccccccccccccc
Q 004994 74 TEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSNLP--VTVRNFSLSGNQLTGSIPESLSRLTQLLDLSLNNN 151 (720)
Q Consensus 74 ~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~--~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~l~~N 151 (720)
+.++.++++++. +|..+ .++|++|+|++|+|++..+..+. .+|+.|+|++|+|++..+..|.++++|++|+|++|
T Consensus 10 ~~v~c~~~~l~~-~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 86 (208)
T 2o6s_A 10 TTVECYSQGRTS-VPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTN 86 (208)
T ss_dssp TEEECCSSCCSS-CCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCccC-CCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCC
Confidence 578899999985 45444 46899999999999955554554 78999999999999776677899999999999999
Q ss_pred ccCCCCCchhcCCCCCceEeccCCcccccCCCCCCCCCCCceeecccccccccccc-cccc-ccceEEccCCcCcccCCc
Q 004994 152 HLNGGIPDAFHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNNKLSGTLNV-LEDL-HLIDLNIENNLFSGPIPE 229 (720)
Q Consensus 152 ~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~-~l~~l~l~~N~l~g~~p~ 229 (720)
+|++..+..|.++++|++|+|++|+|++..+..+.++++|+.|+|++|+|++.++. +..+ .|+.|++++|.+.+..|
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~- 165 (208)
T 2o6s_A 87 QLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP- 165 (208)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCCTT-
T ss_pred cCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecCCC-
Confidence 99977777789999999999999999976666789999999999999999988764 5555 49999999999987655
Q ss_pred ccCCCccccccCccCC
Q 004994 230 KLLSIPNFRKDGNPFN 245 (720)
Q Consensus 230 ~~~~l~~l~~~~n~~~ 245 (720)
++..|....|.+.
T Consensus 166 ---~l~~L~~~~n~~~ 178 (208)
T 2o6s_A 166 ---GIRYLSEWINKHS 178 (208)
T ss_dssp ---TTHHHHHHHHHCT
T ss_pred ---CHHHHHHHHHhCC
Confidence 3444444555443
No 329
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.73 E-value=1.3e-18 Score=182.15 Aligned_cols=175 Identities=21% Similarity=0.229 Sum_probs=84.3
Q ss_pred eecCceeEEEecCCcccccCC----cCcCCCCCccEEeccCCcccccCCCCcc--ccCcEEEecCCcCCCC--Cc--chh
Q 004994 68 CVFSNVTEIRLTGMNLGGVLA----DTLGDLESVINIDLSNNHIGGSIPSNLP--VTVRNFSLSGNQLTGS--IP--ESL 137 (720)
Q Consensus 68 c~~~~l~~l~L~~n~l~~~~~----~~~~~l~~L~~L~L~~N~l~g~ip~~~~--~~L~~L~Ls~N~l~g~--~p--~~l 137 (720)
..+++|+.|+|++|++++..+ ..+..+++|++|+|++|++.+..|..+. .+|++|+|++|++.+. ++ ..+
T Consensus 114 ~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~ 193 (310)
T 4glp_A 114 ATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCP 193 (310)
T ss_dssp CCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCT
T ss_pred ccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhh
Confidence 334455555555555554333 2233455555555555555544444443 4555555555555431 11 112
Q ss_pred hcccccccccccccccCCCCCc----hhcCCCCCceEeccCCcccccCCCCCCCC---CCCceeeccccccccccccccc
Q 004994 138 SRLTQLLDLSLNNNHLNGGIPD----AFHQFTGLINFDLSANNLTGQLPPSTRNL---SSLYSLHLQNNKLSGTLNVLED 210 (720)
Q Consensus 138 ~~l~~L~~L~l~~N~l~g~~p~----~~~~l~~L~~L~ls~N~l~g~~p~~~~~l---~~L~~L~l~~N~l~~~~~~~~~ 210 (720)
.++++|++|+|++|+|+ .+|. .+.++++|++|+|++|+|++.+|..+..+ ++|+.|+|++|+|+..+..+.
T Consensus 194 ~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~- 271 (310)
T 4glp_A 194 HKFPAIQNLALRNTGME-TPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLEQVPKGLP- 271 (310)
T ss_dssp TSSCCCCSCBCCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCCSCCSCCC-
T ss_pred hcCCCCCEEECCCCCCC-chHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCCchhhhhc-
Confidence 44555555555555554 2222 13445555555555555554445554444 355555555555554333222
Q ss_pred cccceEEccCCcCcc-cCCcccCCCccccccCccC
Q 004994 211 LHLIDLNIENNLFSG-PIPEKLLSIPNFRKDGNPF 244 (720)
Q Consensus 211 ~~l~~l~l~~N~l~g-~~p~~~~~l~~l~~~~n~~ 244 (720)
..|+.|+|++|+|++ .++..+.++..|.+.+|++
T Consensus 272 ~~L~~L~Ls~N~l~~~~~~~~l~~L~~L~L~~N~l 306 (310)
T 4glp_A 272 AKLRVLDLSSNRLNRAPQPDELPEVDNLTLDGNPF 306 (310)
T ss_dssp SCCSCEECCSCCCCSCCCTTSCCCCSCEECSSTTT
T ss_pred CCCCEEECCCCcCCCCchhhhCCCccEEECcCCCC
Confidence 235555555555554 2333333444444444443
No 330
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.73 E-value=5.7e-18 Score=192.70 Aligned_cols=176 Identities=18% Similarity=0.199 Sum_probs=99.7
Q ss_pred cCceeEEEecCCcccccC--CcCcCCCCCccEEeccCCcccccCCCCcc--ccCcEEEecCCcCCCCCc-chhhcccccc
Q 004994 70 FSNVTEIRLTGMNLGGVL--ADTLGDLESVINIDLSNNHIGGSIPSNLP--VTVRNFSLSGNQLTGSIP-ESLSRLTQLL 144 (720)
Q Consensus 70 ~~~l~~l~L~~n~l~~~~--~~~~~~l~~L~~L~L~~N~l~g~ip~~~~--~~L~~L~Ls~N~l~g~~p-~~l~~l~~L~ 144 (720)
+++|+.|+|++|++++.. +..+..+++|++|+|++|++.+. |..+. .+|+.|+|++|++++..| ..+.++++|+
T Consensus 346 ~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~-~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~ 424 (570)
T 2z63_A 346 LPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITM-SSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLI 424 (570)
T ss_dssp CTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEE-EEEEETCTTCCEEECTTSEEESCTTSCTTTTCTTCC
T ss_pred CCCCCEEeCcCCccCccccccccccccCccCEEECCCCccccc-cccccccCCCCEEEccCCccccccchhhhhcCCCCC
Confidence 445555555555555432 44555556666666666665532 22233 456666666666665544 3456666666
Q ss_pred cccccccccCCCCCchhcCCCCCceEeccCCccc-ccCCCCCCCCCCCceeeccccccccccc-cccccc-cceEEccCC
Q 004994 145 DLSLNNNHLNGGIPDAFHQFTGLINFDLSANNLT-GQLPPSTRNLSSLYSLHLQNNKLSGTLN-VLEDLH-LIDLNIENN 221 (720)
Q Consensus 145 ~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~-g~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~~-l~~l~l~~N 221 (720)
.|+|++|.+++.+|..|.++++|+.|+|++|.++ +.+|..+..+++|+.|+|++|++++.++ .+..+. |+.|++++|
T Consensus 425 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 504 (570)
T 2z63_A 425 YLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASN 504 (570)
T ss_dssp EEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCC
Confidence 6666666666666666666666666666666665 4566666666666666666666665532 344433 666666666
Q ss_pred cCcccCCcccCCCccc---cccCccCCC
Q 004994 222 LFSGPIPEKLLSIPNF---RKDGNPFNT 246 (720)
Q Consensus 222 ~l~g~~p~~~~~l~~l---~~~~n~~~~ 246 (720)
++++..|..+..+++| .+.+|++.|
T Consensus 505 ~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 532 (570)
T 2z63_A 505 QLKSVPDGIFDRLTSLQKIWLHTNPWDC 532 (570)
T ss_dssp CCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred cCCCCCHHHhhcccCCcEEEecCCcccC
Confidence 6665555544444333 344454443
No 331
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.73 E-value=6.4e-18 Score=164.43 Aligned_cols=151 Identities=21% Similarity=0.294 Sum_probs=128.7
Q ss_pred eecCceeEEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCCCcc--ccCcEEEecCCcCCCCCcchhhccccccc
Q 004994 68 CVFSNVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSNLP--VTVRNFSLSGNQLTGSIPESLSRLTQLLD 145 (720)
Q Consensus 68 c~~~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~--~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~ 145 (720)
..+++|+.|+|++|+++ .+| .+..+++|++|+|++|.++ .++ .+. ++|+.|+|++|++++..|..|+.+++|+.
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~-~~~-~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~ 116 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT-NYN-PISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTL 116 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS-CCG-GGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCE
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC-cch-hhhcCCCCCEEEeECCccCcccChhhcCCCCCCE
Confidence 34678999999999999 455 6999999999999999876 333 444 78999999999999888999999999999
Q ss_pred ccccccccCCCCCchhcCCCCCceEeccCCc-ccccCCCCCCCCCCCceeecccccccccccccccc-ccceEEccCCcC
Q 004994 146 LSLNNNHLNGGIPDAFHQFTGLINFDLSANN-LTGQLPPSTRNLSSLYSLHLQNNKLSGTLNVLEDL-HLIDLNIENNLF 223 (720)
Q Consensus 146 L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~-l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~-~l~~l~l~~N~l 223 (720)
|+|++|++++..|..|..+++|++|+|++|. ++ .+| .+..+++|+.|+|++|++++.. .+..+ .|+.|++++|++
T Consensus 117 L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~~~-~l~~l~~L~~L~l~~N~i 193 (197)
T 4ezg_A 117 LDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHDYR-GIEDFPKLNQLYAFSQTI 193 (197)
T ss_dssp EECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCCCT-TGGGCSSCCEEEECBC--
T ss_pred EEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcChH-HhccCCCCCEEEeeCccc
Confidence 9999999998889999999999999999998 65 677 6899999999999999999865 44444 499999999998
Q ss_pred cc
Q 004994 224 SG 225 (720)
Q Consensus 224 ~g 225 (720)
.+
T Consensus 194 ~~ 195 (197)
T 4ezg_A 194 GG 195 (197)
T ss_dssp --
T ss_pred CC
Confidence 64
No 332
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.72 E-value=1.5e-17 Score=173.78 Aligned_cols=166 Identities=22% Similarity=0.362 Sum_probs=133.0
Q ss_pred EeecCceeEEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCCCcc--ccCcEEEecCCcCCCCCcchhhcccccc
Q 004994 67 FCVFSNVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSNLP--VTVRNFSLSGNQLTGSIPESLSRLTQLL 144 (720)
Q Consensus 67 ~c~~~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~--~~L~~L~Ls~N~l~g~~p~~l~~l~~L~ 144 (720)
++.+++|+.|+|++|++++..+ +..+++|++|+|++|++++ +| .+. .+|+.|+|++|++++ +|. +.++++|+
T Consensus 59 ~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~ 132 (308)
T 1h6u_A 59 VQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTLDLTSTQITD-VTP-LAGLSNLQ 132 (308)
T ss_dssp GGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEECTTSCCCC-CGG-GTTCTTCC
T ss_pred hhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEEECCCCCCCC-chh-hcCCCCCC
Confidence 4567899999999999987554 9999999999999999984 44 343 689999999999985 454 89999999
Q ss_pred cccccccccCCCCCchhcCCCCCceEeccCCcccccCCCCCCCCCCCceeeccccccccccccccccccceEEccCCcCc
Q 004994 145 DLSLNNNHLNGGIPDAFHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNNKLSGTLNVLEDLHLIDLNIENNLFS 224 (720)
Q Consensus 145 ~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~l~l~~N~l~ 224 (720)
.|+|++|++++. +. +..+++|+.|+|++|++++ ++. +..+++|+.|+|++|++++..+......|+.|+|++|+++
T Consensus 133 ~L~l~~n~l~~~-~~-l~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~L~~N~l~ 208 (308)
T 1h6u_A 133 VLYLDLNQITNI-SP-LAGLTNLQYLSIGNAQVSD-LTP-LANLSKLTTLKADDNKISDISPLASLPNLIEVHLKNNQIS 208 (308)
T ss_dssp EEECCSSCCCCC-GG-GGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGGGGGCTTCCEEECTTSCCC
T ss_pred EEECCCCccCcC-cc-ccCCCCccEEEccCCcCCC-Chh-hcCCCCCCEEECCCCccCcChhhcCCCCCCEEEccCCccC
Confidence 999999999854 43 8899999999999999984 554 8899999999999999988766333334999999999999
Q ss_pred ccCCcccCCCcccc---ccCccC
Q 004994 225 GPIPEKLLSIPNFR---KDGNPF 244 (720)
Q Consensus 225 g~~p~~~~~l~~l~---~~~n~~ 244 (720)
+..| +..+++|+ +.+|++
T Consensus 209 ~~~~--l~~l~~L~~L~l~~N~i 229 (308)
T 1h6u_A 209 DVSP--LANTSNLFIVTLTNQTI 229 (308)
T ss_dssp BCGG--GTTCTTCCEEEEEEEEE
T ss_pred cccc--ccCCCCCCEEEccCCee
Confidence 6554 55555554 455554
No 333
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.72 E-value=1.3e-17 Score=187.70 Aligned_cols=111 Identities=18% Similarity=0.230 Sum_probs=86.5
Q ss_pred CceeEeecCceeEEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCCCccccCcEEEecCCcCCC-CCcchhhccc
Q 004994 63 WQGVFCVFSNVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSNLPVTVRNFSLSGNQLTG-SIPESLSRLT 141 (720)
Q Consensus 63 w~gv~c~~~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~~~L~~L~Ls~N~l~g-~~p~~l~~l~ 141 (720)
..+.+..+++|+.|+|++|++++..|..|+.+++|++|+|++|+|+ .+|..-..+|++|+|++|++++ .+|..|++++
T Consensus 37 ~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~l~~L~~L~L~~N~l~~~~~p~~~~~l~ 115 (520)
T 2z7x_B 37 WTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCHPTVNLKHLDLSFNAFDALPICKEFGNMS 115 (520)
T ss_dssp CHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEECCCCCCCSEEECCSSCCSSCCCCGGGGGCT
T ss_pred ChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecCccccCCccEEeccCCccccccchhhhccCC
Confidence 3355677889999999999999988999999999999999999998 6777733789999999999987 5788999999
Q ss_pred ccccccccccccCCCCCchhcCCCCC--ceEeccCCcc
Q 004994 142 QLLDLSLNNNHLNGGIPDAFHQFTGL--INFDLSANNL 177 (720)
Q Consensus 142 ~L~~L~l~~N~l~g~~p~~~~~l~~L--~~L~ls~N~l 177 (720)
+|++|+|++|.|++ ..|..+++| +.|+|++|.+
T Consensus 116 ~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l 150 (520)
T 2z7x_B 116 QLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGET 150 (520)
T ss_dssp TCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTT
T ss_pred cceEEEecCcccch---hhccccccceeeEEEeecccc
Confidence 99999988888754 233333334 4444444444
No 334
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.71 E-value=2.7e-17 Score=159.31 Aligned_cols=130 Identities=25% Similarity=0.412 Sum_probs=118.9
Q ss_pred cEEeccCCcccccCCCCccccCcEEEecCCcCCCCCcc-hhhcccccccccccccccCCCCCchhcCCCCCceEeccCCc
Q 004994 98 INIDLSNNHIGGSIPSNLPVTVRNFSLSGNQLTGSIPE-SLSRLTQLLDLSLNNNHLNGGIPDAFHQFTGLINFDLSANN 176 (720)
Q Consensus 98 ~~L~L~~N~l~g~ip~~~~~~L~~L~Ls~N~l~g~~p~-~l~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~ 176 (720)
+.|++++|+|+ .+|..++.+|+.|+|++|+|++..+. .|.++++|+.|+|++|+|++..|..|.++++|++|+|++|+
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 89 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENK 89 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCC
T ss_pred CEEEcCCCCcC-cCccCCCCCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCc
Confidence 78999999997 89999999999999999999976664 48999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCCceeeccccccccccc-cccccc-cceEEccCCcCcccCC
Q 004994 177 LTGQLPPSTRNLSSLYSLHLQNNKLSGTLN-VLEDLH-LIDLNIENNLFSGPIP 228 (720)
Q Consensus 177 l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~~-l~~l~l~~N~l~g~~p 228 (720)
|++..|..|.++++|+.|+|++|+|++.++ .+..+. |+.|+|++|.+++..+
T Consensus 90 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 90 IKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred CCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 998888889999999999999999999865 455554 9999999999998765
No 335
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.71 E-value=2.6e-17 Score=189.53 Aligned_cols=162 Identities=18% Similarity=0.188 Sum_probs=136.7
Q ss_pred ceeEEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCCCcc--ccCcEEEecCCcCCCCCcchhhccccccccccc
Q 004994 72 NVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSNLP--VTVRNFSLSGNQLTGSIPESLSRLTQLLDLSLN 149 (720)
Q Consensus 72 ~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~--~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~l~ 149 (720)
+++.|+|++|+|++..+..|.++++|++|||++|+|++..|..|. .+|++|+|++|+|++..+..|.++++|++|+|+
T Consensus 53 ~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls 132 (635)
T 4g8a_A 53 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 132 (635)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECT
T ss_pred CCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECC
Confidence 689999999999988888999999999999999999965566665 789999999999997777789999999999999
Q ss_pred ccccCCCCCchhcCCCCCceEeccCCcccc-cCCCCCCCCCCCceeeccccccccccc-ccc---ccc--cceEEccCCc
Q 004994 150 NNHLNGGIPDAFHQFTGLINFDLSANNLTG-QLPPSTRNLSSLYSLHLQNNKLSGTLN-VLE---DLH--LIDLNIENNL 222 (720)
Q Consensus 150 ~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g-~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~---~~~--l~~l~l~~N~ 222 (720)
+|+|++..+..|+++++|++|+|++|.+++ .+|..+..+++|+.|+|++|+|++..+ .+. .+. ...++++.|.
T Consensus 133 ~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~ 212 (635)
T 4g8a_A 133 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNP 212 (635)
T ss_dssp TSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCC
T ss_pred CCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCc
Confidence 999997777789999999999999999975 467888999999999999999988763 232 222 5578899999
Q ss_pred CcccCCcccCC
Q 004994 223 FSGPIPEKLLS 233 (720)
Q Consensus 223 l~g~~p~~~~~ 233 (720)
++...|..+..
T Consensus 213 l~~i~~~~~~~ 223 (635)
T 4g8a_A 213 MNFIQPGAFKE 223 (635)
T ss_dssp CCEECTTTTTT
T ss_pred ccccCcccccc
Confidence 98655554443
No 336
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.71 E-value=3.1e-17 Score=186.40 Aligned_cols=120 Identities=17% Similarity=0.140 Sum_probs=81.7
Q ss_pred ceeEeecCceeEEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCCCccccCcEEEecCCcCCC-CCcchhhcccc
Q 004994 64 QGVFCVFSNVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSNLPVTVRNFSLSGNQLTG-SIPESLSRLTQ 142 (720)
Q Consensus 64 ~gv~c~~~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~~~L~~L~Ls~N~l~g-~~p~~l~~l~~ 142 (720)
.+.+..+++|+.|+|++|++++..|..|+.+++|++|+|++|+|+ .+|..-..+|+.|+|++|++++ .+|..|+++++
T Consensus 69 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~ 147 (562)
T 3a79_B 69 MPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCCPMASLRHLDLSFNDFDVLPVCKEFGNLTK 147 (562)
T ss_dssp GGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSCCCTTCSEEECCSSCCSBCCCCGGGGGCTT
T ss_pred hhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCccccccCCEEECCCCCccccCchHhhcccCc
Confidence 345566777888888888888777777888888888888888887 6666633678888888888875 34577888888
Q ss_pred cccccccccccCCCCCchhcCCCCC--ceEeccCCcc--cccCCCCCCC
Q 004994 143 LLDLSLNNNHLNGGIPDAFHQFTGL--INFDLSANNL--TGQLPPSTRN 187 (720)
Q Consensus 143 L~~L~l~~N~l~g~~p~~~~~l~~L--~~L~ls~N~l--~g~~p~~~~~ 187 (720)
|++|+|++|++++. .+..+++| +.|+|++|.+ ++..|..+..
T Consensus 148 L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~ 193 (562)
T 3a79_B 148 LTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYHIKGGETESLQI 193 (562)
T ss_dssp CCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCCCCSSSCCEEEE
T ss_pred ccEEecCCCccccC---chhhhhhceeeEEEeecccccccccCcccccc
Confidence 88888888777642 23333444 5666666655 4444544443
No 337
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.71 E-value=5.6e-18 Score=177.90 Aligned_cols=168 Identities=20% Similarity=0.173 Sum_probs=136.9
Q ss_pred EeecCceeEEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCCCcc--ccCcEEEecCCcCCCCCcchhhcccccc
Q 004994 67 FCVFSNVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSNLP--VTVRNFSLSGNQLTGSIPESLSRLTQLL 144 (720)
Q Consensus 67 ~c~~~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~--~~L~~L~Ls~N~l~g~~p~~l~~l~~L~ 144 (720)
+...++|+.|+|++|++++..|..|..+++|++|+|++|++++..| +. .+|++|+|++|++++. | .+++|+
T Consensus 30 ~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~l-~----~~~~L~ 102 (317)
T 3o53_A 30 RQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQEL-L----VGPSIE 102 (317)
T ss_dssp HTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEEE-E----ECTTCC
T ss_pred hccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCccccc-c----CCCCcC
Confidence 3345689999999999999888999999999999999999997665 43 7899999999999843 3 448999
Q ss_pred cccccccccCCCCCchhcCCCCCceEeccCCcccccCCCCCCCCCCCceeeccccccccccc-cc-ccc-ccceEEccCC
Q 004994 145 DLSLNNNHLNGGIPDAFHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNNKLSGTLN-VL-EDL-HLIDLNIENN 221 (720)
Q Consensus 145 ~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~-~~~-~l~~l~l~~N 221 (720)
.|++++|++++..+. .+++|+.|+|++|++++..|..+..+++|+.|+|++|.+++..+ .+ ..+ .|+.|+|++|
T Consensus 103 ~L~l~~n~l~~~~~~---~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N 179 (317)
T 3o53_A 103 TLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYN 179 (317)
T ss_dssp EEECCSSCCSEEEEC---CCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTS
T ss_pred EEECCCCccCCcCcc---ccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCC
Confidence 999999999975544 36789999999999998778899999999999999999998764 33 233 4999999999
Q ss_pred cCcccCCcc--cCCCccccccCccCC
Q 004994 222 LFSGPIPEK--LLSIPNFRKDGNPFN 245 (720)
Q Consensus 222 ~l~g~~p~~--~~~l~~l~~~~n~~~ 245 (720)
.+++. |.. +.++..|.+.+|...
T Consensus 180 ~l~~~-~~~~~l~~L~~L~Ls~N~l~ 204 (317)
T 3o53_A 180 FIYDV-KGQVVFAKLKTLDLSSNKLA 204 (317)
T ss_dssp CCCEE-ECCCCCTTCCEEECCSSCCC
T ss_pred cCccc-ccccccccCCEEECCCCcCC
Confidence 99965 332 334445555555543
No 338
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.70 E-value=3.8e-17 Score=185.94 Aligned_cols=164 Identities=20% Similarity=0.209 Sum_probs=145.0
Q ss_pred CceeEEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCCCcc--ccCcEEEecCCcCCCCCcchhhcccccccccc
Q 004994 71 SNVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSNLP--VTVRNFSLSGNQLTGSIPESLSRLTQLLDLSL 148 (720)
Q Consensus 71 ~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~--~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~l 148 (720)
.+++.|+|++|++++..+..|..+++|++|+|++|++++..|..+. .+|++|+|++|++++..|..|+++++|++|+|
T Consensus 28 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (570)
T 2z63_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (570)
T ss_dssp SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccc
Confidence 4799999999999998889999999999999999999976677776 79999999999999888899999999999999
Q ss_pred cccccCCCCCchhcCCCCCceEeccCCcccc-cCCCCCCCCCCCceeeccccccccccc-cccccc-c----ceEEccCC
Q 004994 149 NNNHLNGGIPDAFHQFTGLINFDLSANNLTG-QLPPSTRNLSSLYSLHLQNNKLSGTLN-VLEDLH-L----IDLNIENN 221 (720)
Q Consensus 149 ~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g-~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~~-l----~~l~l~~N 221 (720)
++|++++..+..|+++++|++|+|++|.+++ .+|..++++++|+.|++++|++++.++ .+..+. | ..|++++|
T Consensus 108 ~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n 187 (570)
T 2z63_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLN 187 (570)
T ss_dssp TTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTC
T ss_pred cccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCCC
Confidence 9999997666679999999999999999986 479999999999999999999998764 343332 4 78999999
Q ss_pred cCcccCCcccCCC
Q 004994 222 LFSGPIPEKLLSI 234 (720)
Q Consensus 222 ~l~g~~p~~~~~l 234 (720)
.+++..|..+..+
T Consensus 188 ~l~~~~~~~~~~~ 200 (570)
T 2z63_A 188 PMNFIQPGAFKEI 200 (570)
T ss_dssp CCCEECTTTTTTC
T ss_pred CceecCHHHhccC
Confidence 9998888776653
No 339
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.69 E-value=4.9e-17 Score=168.40 Aligned_cols=161 Identities=23% Similarity=0.342 Sum_probs=120.6
Q ss_pred ecCceeEEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCCCcc--ccCcEEEecCCcCCCCCcchhhcccccccc
Q 004994 69 VFSNVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSNLP--VTVRNFSLSGNQLTGSIPESLSRLTQLLDL 146 (720)
Q Consensus 69 ~~~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~--~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L 146 (720)
.+++|+.|++++|++... +.+..+++|+.|+|++|++++..| +. .+|+.|+|++|++++ +| .+.++++|+.|
T Consensus 44 ~l~~L~~L~l~~~~i~~~--~~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L 117 (291)
T 1h6t_A 44 ELNSIDQIIANNSDIKSV--QGIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSL 117 (291)
T ss_dssp HHHTCCEEECTTSCCCCC--TTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEE
T ss_pred hcCcccEEEccCCCcccC--hhHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEE
Confidence 456788888888888754 347888888888888888885443 43 678888888888884 44 48888888888
Q ss_pred cccccccCCCCCchhcCCCCCceEeccCCcccccCCCCCCCCCCCceeecccccccccccccccc-ccceEEccCCcCcc
Q 004994 147 SLNNNHLNGGIPDAFHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNNKLSGTLNVLEDL-HLIDLNIENNLFSG 225 (720)
Q Consensus 147 ~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~-~l~~l~l~~N~l~g 225 (720)
+|++|++++ + +.+..+++|+.|+|++|++++ + ..+..+++|+.|+|++|++++..+ +..+ .|+.|++++|.+++
T Consensus 118 ~L~~n~i~~-~-~~l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~~N~l~~~~~-l~~l~~L~~L~L~~N~i~~ 192 (291)
T 1h6t_A 118 SLEHNGISD-I-NGLVHLPQLESLYLGNNKITD-I-TVLSRLTKLDTLSLEDNQISDIVP-LAGLTKLQNLYLSKNHISD 192 (291)
T ss_dssp ECTTSCCCC-C-GGGGGCTTCCEEECCSSCCCC-C-GGGGGCTTCSEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCB
T ss_pred ECCCCcCCC-C-hhhcCCCCCCEEEccCCcCCc-c-hhhccCCCCCEEEccCCccccchh-hcCCCccCEEECCCCcCCC
Confidence 888888875 3 468888888888888888884 3 567888888888888888887766 4444 48888888888885
Q ss_pred cCCcccCCCccccccCc
Q 004994 226 PIPEKLLSIPNFRKDGN 242 (720)
Q Consensus 226 ~~p~~~~~l~~l~~~~n 242 (720)
+|. +..+++|+..+.
T Consensus 193 -l~~-l~~l~~L~~L~l 207 (291)
T 1h6t_A 193 -LRA-LAGLKNLDVLEL 207 (291)
T ss_dssp -CGG-GTTCTTCSEEEE
T ss_pred -Chh-hccCCCCCEEEC
Confidence 443 555555554433
No 340
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.68 E-value=8.8e-17 Score=182.10 Aligned_cols=173 Identities=20% Similarity=0.216 Sum_probs=147.9
Q ss_pred eecCceeEEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCCCcc--ccCcEEEecCCcCCCCCcchhhccccccc
Q 004994 68 CVFSNVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSNLP--VTVRNFSLSGNQLTGSIPESLSRLTQLLD 145 (720)
Q Consensus 68 c~~~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~--~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~ 145 (720)
|.-..+ .++++|+++. +|..+. ++|++|+|++|++++..|..+. .+|++|+|++|++++..|..|+++++|++
T Consensus 4 C~~~~~--c~~~~~~l~~-ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~ 78 (549)
T 2z81_A 4 CDASGV--CDGRSRSFTS-IPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEH 78 (549)
T ss_dssp ECTTSE--EECTTSCCSS-CCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCE
T ss_pred CCCCce--EECCCCcccc-ccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCE
Confidence 544444 7899999984 666554 7999999999999988888886 79999999999999988899999999999
Q ss_pred ccccccccCCCCCchhcCCCCCceEeccCCcccc-cCCCCCCCCCCCceeeccccccccccc--cccccc-cceEEccCC
Q 004994 146 LSLNNNHLNGGIPDAFHQFTGLINFDLSANNLTG-QLPPSTRNLSSLYSLHLQNNKLSGTLN--VLEDLH-LIDLNIENN 221 (720)
Q Consensus 146 L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g-~~p~~~~~l~~L~~L~l~~N~l~~~~~--~~~~~~-l~~l~l~~N 221 (720)
|+|++|++++..|..|+++++|++|+|++|.+++ .+|..+.++++|+.|+|++|.+.+.++ .+..+. |++|++++|
T Consensus 79 L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n 158 (549)
T 2z81_A 79 LDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKAL 158 (549)
T ss_dssp EECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEET
T ss_pred EECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCC
Confidence 9999999998878789999999999999999986 467889999999999999999554442 456665 999999999
Q ss_pred cCcccCCcccCCCccccccCccCC
Q 004994 222 LFSGPIPEKLLSIPNFRKDGNPFN 245 (720)
Q Consensus 222 ~l~g~~p~~~~~l~~l~~~~n~~~ 245 (720)
.+++.+|..+..+++|+..+...|
T Consensus 159 ~l~~~~~~~l~~l~~L~~L~l~~n 182 (549)
T 2z81_A 159 SLRNYQSQSLKSIRDIHHLTLHLS 182 (549)
T ss_dssp TCCEECTTTTTTCSEEEEEEEECS
T ss_pred cccccChhhhhccccCceEecccC
Confidence 999999999988887775544433
No 341
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.68 E-value=1.6e-16 Score=153.82 Aligned_cols=124 Identities=26% Similarity=0.325 Sum_probs=57.2
Q ss_pred EEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCCCcc--ccCcEEEecCCcCCCCCcchhhcccccccccccccc
Q 004994 75 EIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSNLP--VTVRNFSLSGNQLTGSIPESLSRLTQLLDLSLNNNH 152 (720)
Q Consensus 75 ~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~--~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~l~~N~ 152 (720)
.+++++|+|+. +|..+. ++|+.|+|++|+|+ .+|..+. .+|+.|+|++|+|++..+..|.++++|+.|+|++|+
T Consensus 14 ~l~~~~~~l~~-ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~ 89 (193)
T 2wfh_A 14 VVRCSNKGLKV-LPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89 (193)
T ss_dssp EEECTTSCCSS-CCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEcCCCCCCc-CCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCc
Confidence 34555555552 333322 34555555555554 4443333 344444444444444444444444444444444444
Q ss_pred cCCCCCchhcCCCCCceEeccCCcccccCCCCCCCCCCCceeeccccccc
Q 004994 153 LNGGIPDAFHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNNKLS 202 (720)
Q Consensus 153 l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~ 202 (720)
|++..|..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|.+.
T Consensus 90 l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 90 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLY 139 (193)
T ss_dssp CCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEE
T ss_pred cCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCee
Confidence 44444444444444444444444444322233444444444444444443
No 342
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.68 E-value=4.7e-17 Score=182.89 Aligned_cols=156 Identities=26% Similarity=0.296 Sum_probs=131.4
Q ss_pred CceeEEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCCCccccCcEEEecCCcCCCCCcchhhcccccccccccc
Q 004994 71 SNVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSNLPVTVRNFSLSGNQLTGSIPESLSRLTQLLDLSLNN 150 (720)
Q Consensus 71 ~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~l~~ 150 (720)
++|+.|+|++|+|+ .+| ..+++|+.|+|++|+|++ +|. ++.+|+.|+|++|+|++ +|. .+++|+.|+|++
T Consensus 80 ~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~ 149 (571)
T 3cvr_A 80 PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPASLKHLDVDNNQLTM-LPE---LPALLEYINADN 149 (571)
T ss_dssp TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCS
T ss_pred CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhcCCCEEECCCCcCCC-CCC---cCccccEEeCCC
Confidence 68999999999999 566 568999999999999996 888 77899999999999996 776 689999999999
Q ss_pred cccCCCCCchhcCCCCCceEeccCCcccccCCCCCCCCCCCceeecccccccccccccccccc-------ceEEccCCcC
Q 004994 151 NHLNGGIPDAFHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNNKLSGTLNVLEDLHL-------IDLNIENNLF 223 (720)
Q Consensus 151 N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l-------~~l~l~~N~l 223 (720)
|+|++ +|. .+++|+.|+|++|+|++ +|. +. ++|+.|+|++|+|+..+. +.. .| +.|+|++|+|
T Consensus 150 N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~~lp~-~~~-~L~~~~~~L~~L~Ls~N~l 219 (571)
T 3cvr_A 150 NQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLESLPA-VPV-RNHHSEETEIFFRCRENRI 219 (571)
T ss_dssp SCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCSSCCC-CC---------CCEEEECCSSCC
T ss_pred CccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCCchhh-HHH-hhhcccccceEEecCCCcc
Confidence 99996 776 67899999999999995 887 66 899999999999996666 443 56 9999999999
Q ss_pred cccCCcccCCCccccccCccCCCc
Q 004994 224 SGPIPEKLLSIPNFRKDGNPFNTT 247 (720)
Q Consensus 224 ~g~~p~~~~~l~~l~~~~n~~~~~ 247 (720)
+ .+|..+..+++|+..+...|..
T Consensus 220 ~-~lp~~l~~l~~L~~L~L~~N~l 242 (571)
T 3cvr_A 220 T-HIPENILSLDPTCTIILEDNPL 242 (571)
T ss_dssp C-CCCGGGGGSCTTEEEECCSSSC
T ss_pred e-ecCHHHhcCCCCCEEEeeCCcC
Confidence 9 6898887777766554444433
No 343
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.68 E-value=1.6e-16 Score=183.04 Aligned_cols=162 Identities=19% Similarity=0.215 Sum_probs=136.8
Q ss_pred CcCcCCCCCccEEeccCCcccccCCCCcc---ccCcEEEecCCcCCCCCcchhhccccccccccccccc-CCCCCchhcC
Q 004994 88 ADTLGDLESVINIDLSNNHIGGSIPSNLP---VTVRNFSLSGNQLTGSIPESLSRLTQLLDLSLNNNHL-NGGIPDAFHQ 163 (720)
Q Consensus 88 ~~~~~~l~~L~~L~L~~N~l~g~ip~~~~---~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~l~~N~l-~g~~p~~~~~ 163 (720)
+..+..+++|+.++++.|++....+.... .+++.++++.|++++..|..+..+++|+.|+|++|++ .+.+|..|..
T Consensus 413 ~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~ 492 (635)
T 4g8a_A 413 SSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTE 492 (635)
T ss_dssp CSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTT
T ss_pred cccccccccccchhhhhccccccccccccccccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhh
Confidence 44566777888888887777755554432 6899999999999999999999999999999999985 4457888999
Q ss_pred CCCCceEeccCCcccccCCCCCCCCCCCceeeccccccccccc-cccccc-cceEEccCCcCcccCCcccCC----Cccc
Q 004994 164 FTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNNKLSGTLN-VLEDLH-LIDLNIENNLFSGPIPEKLLS----IPNF 237 (720)
Q Consensus 164 l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~~-l~~l~l~~N~l~g~~p~~~~~----l~~l 237 (720)
+++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++.++ .+..+. |+.|+|++|+|++..|..+.. +..|
T Consensus 493 l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L 572 (635)
T 4g8a_A 493 LRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFL 572 (635)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEE
T ss_pred ccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEE
Confidence 9999999999999998889999999999999999999999875 456665 999999999999999988764 4556
Q ss_pred cccCccCCCccc
Q 004994 238 RKDGNPFNTTVI 249 (720)
Q Consensus 238 ~~~~n~~~~~~~ 249 (720)
.+.+|+|.|+|.
T Consensus 573 ~L~~Np~~C~C~ 584 (635)
T 4g8a_A 573 NLTQNDFACTCE 584 (635)
T ss_dssp ECTTCCBCCSGG
T ss_pred EeeCCCCcccCC
Confidence 788999988763
No 344
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.67 E-value=2.1e-16 Score=150.81 Aligned_cols=137 Identities=22% Similarity=0.269 Sum_probs=94.4
Q ss_pred CCCCCCCceeEeecCceeEEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCCCcc--ccCcEEEecCCcCCCCCc
Q 004994 57 DPCGDSWQGVFCVFSNVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSNLP--VTVRNFSLSGNQLTGSIP 134 (720)
Q Consensus 57 ~~c~~~w~gv~c~~~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~--~~L~~L~Ls~N~l~g~~p 134 (720)
+.|.|.|.++.| ++|+++. +|..+ .++|+.|+|++|+|++..+..+. .+|++|+|++|+|++..+
T Consensus 3 ~~C~C~~~~l~~----------~~~~l~~-~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 69 (177)
T 2o6r_A 3 SRCSCSGTEIRC----------NSKGLTS-VPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPD 69 (177)
T ss_dssp TTCEEETTEEEC----------CSSCCSS-CCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCT
T ss_pred CCCEeCCCEEEe----------cCCCCcc-CCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeCh
Confidence 456556666555 4555553 34333 36788888888888754444444 678888888888876555
Q ss_pred chhhcccccccccccccccCCCCCchhcCCCCCceEeccCCcccccCCCCCCCCCCCceeeccccccccccc
Q 004994 135 ESLSRLTQLLDLSLNNNHLNGGIPDAFHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNNKLSGTLN 206 (720)
Q Consensus 135 ~~l~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~ 206 (720)
..|.++++|+.|+|++|+|++..+..|.++++|+.|+|++|+|++..+..+..+++|+.|+|++|.+++..+
T Consensus 70 ~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 70 GVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp TTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred hHccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 667778888888888888876666667778888888888888875444445777788888888777776554
No 345
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.67 E-value=1.2e-16 Score=166.79 Aligned_cols=164 Identities=23% Similarity=0.396 Sum_probs=136.3
Q ss_pred ecCceeEEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCCCcc--ccCcEEEecCCcCCCCCcchhhcccccccc
Q 004994 69 VFSNVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSNLP--VTVRNFSLSGNQLTGSIPESLSRLTQLLDL 146 (720)
Q Consensus 69 ~~~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~--~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L 146 (720)
.+++|+.|++++|+++. ++ .+..+++|++|+|++|++++ +|. +. .+|+.|+|++|++++ +| .+.++++|+.|
T Consensus 39 ~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~-~~~-~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L 112 (308)
T 1h6u_A 39 DLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITD-LAP-LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTL 112 (308)
T ss_dssp HHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEE
T ss_pred HcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCC-Chh-HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEE
Confidence 46789999999999986 44 68999999999999999995 444 54 789999999999995 44 69999999999
Q ss_pred cccccccCCCCCchhcCCCCCceEeccCCcccccCCCCCCCCCCCceeecccccccccccccccc-ccceEEccCCcCcc
Q 004994 147 SLNNNHLNGGIPDAFHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNNKLSGTLNVLEDL-HLIDLNIENNLFSG 225 (720)
Q Consensus 147 ~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~-~l~~l~l~~N~l~g 225 (720)
+|++|++++ +|. +..+++|+.|+|++|++++ ++. +..+++|+.|+|++|++++..+ +..+ .|+.|++++|++++
T Consensus 113 ~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~l~~n~l~~ 187 (308)
T 1h6u_A 113 DLTSTQITD-VTP-LAGLSNLQVLYLDLNQITN-ISP-LAGLTNLQYLSIGNAQVSDLTP-LANLSKLTTLKADDNKISD 187 (308)
T ss_dssp ECTTSCCCC-CGG-GTTCTTCCEEECCSSCCCC-CGG-GGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCC
T ss_pred ECCCCCCCC-chh-hcCCCCCCEEECCCCccCc-Ccc-ccCCCCccEEEccCCcCCCChh-hcCCCCCCEEECCCCccCc
Confidence 999999986 453 9999999999999999985 444 8999999999999999998766 5555 49999999999996
Q ss_pred cCCcccCCCccccccCccCC
Q 004994 226 PIPEKLLSIPNFRKDGNPFN 245 (720)
Q Consensus 226 ~~p~~~~~l~~l~~~~n~~~ 245 (720)
..| +..+++|+..+...|
T Consensus 188 ~~~--l~~l~~L~~L~L~~N 205 (308)
T 1h6u_A 188 ISP--LASLPNLIEVHLKNN 205 (308)
T ss_dssp CGG--GGGCTTCCEEECTTS
T ss_pred Chh--hcCCCCCCEEEccCC
Confidence 544 555555554444433
No 346
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.67 E-value=1.1e-16 Score=151.23 Aligned_cols=132 Identities=21% Similarity=0.256 Sum_probs=95.2
Q ss_pred CceeEEEecCCccc-ccCCcCcCCCCCccEEeccCCcccccCCCCcc--ccCcEEEecCCcCCCCCcchhhccccccccc
Q 004994 71 SNVTEIRLTGMNLG-GVLADTLGDLESVINIDLSNNHIGGSIPSNLP--VTVRNFSLSGNQLTGSIPESLSRLTQLLDLS 147 (720)
Q Consensus 71 ~~l~~l~L~~n~l~-~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~--~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ 147 (720)
++|+.|+|++|+++ +.+|..+..+++|++|+|++|+|++. ..+. .+|+.|+|++|++++.+|..+.++++|+.|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 56778888888887 67777777788888888888887744 4443 5777777777777766777777777777777
Q ss_pred ccccccCCCC-CchhcCCCCCceEeccCCcccccCCC----CCCCCCCCceeecccccccccc
Q 004994 148 LNNNHLNGGI-PDAFHQFTGLINFDLSANNLTGQLPP----STRNLSSLYSLHLQNNKLSGTL 205 (720)
Q Consensus 148 l~~N~l~g~~-p~~~~~l~~L~~L~ls~N~l~g~~p~----~~~~l~~L~~L~l~~N~l~~~~ 205 (720)
|++|+|++.. +..+..+++|+.|+|++|.+++ +|. .+..+++|+.|++++|.+...+
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~-~~~~~~~~~~~l~~L~~L~l~~n~~~~~~ 163 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTN-LNDYRESVFKLLPQLTYLDGYDREDQEAP 163 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGT-STTHHHHHHTTCSSCCEETTEETTSCBCC
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcc-hHHHHHHHHHhCccCcEecCCCCChhhcc
Confidence 7777777432 2567777777777777777773 443 6677777777777777765544
No 347
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.67 E-value=4.8e-16 Score=171.23 Aligned_cols=160 Identities=25% Similarity=0.318 Sum_probs=110.0
Q ss_pred CceeEEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCCCccccCcEEEecCCcCCCCCcchhhcccccccccccc
Q 004994 71 SNVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSNLPVTVRNFSLSGNQLTGSIPESLSRLTQLLDLSLNN 150 (720)
Q Consensus 71 ~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~l~~ 150 (720)
++|+.|+|++|++++ +| .|+.+++|++|+|++|++++ +|..+ .+|++|+|++|++++ +| .++++++|+.|++++
T Consensus 131 ~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~-~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~ 204 (454)
T 1jl5_A 131 PLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP-PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADN 204 (454)
T ss_dssp TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC-TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCS
T ss_pred CCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc-ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCC
Confidence 467777777777775 55 47777777777777777773 66544 477777777777775 55 577777777777777
Q ss_pred cccCCCCCchhcCCCCCceEeccCCcccccCCCCCCCCCCCceeeccccccccccccccccccceEEccCCcCcccCCcc
Q 004994 151 NHLNGGIPDAFHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNNKLSGTLNVLEDLHLIDLNIENNLFSGPIPEK 230 (720)
Q Consensus 151 N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~l~l~~N~l~g~~p~~ 230 (720)
|++++ +|... ++|+.|++++|.++ .+| .++.+++|+.|++++|++++.+... ..|+.|++++|++++ +|..
T Consensus 205 N~l~~-l~~~~---~~L~~L~l~~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~l~~~~--~~L~~L~l~~N~l~~-l~~~ 275 (454)
T 1jl5_A 205 NSLKK-LPDLP---LSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLKTLPDLP--PSLEALNVRDNYLTD-LPEL 275 (454)
T ss_dssp SCCSS-CCCCC---TTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCSSCCSCC--TTCCEEECCSSCCSC-CCCC
T ss_pred CcCCc-CCCCc---CcccEEECcCCcCC-ccc-ccCCCCCCCEEECCCCcCCcccccc--cccCEEECCCCcccc-cCcc
Confidence 77774 44432 46777777777777 666 3777778888888888777654322 347777777777775 6666
Q ss_pred cCCCccccccCccCC
Q 004994 231 LLSIPNFRKDGNPFN 245 (720)
Q Consensus 231 ~~~l~~l~~~~n~~~ 245 (720)
+.++..|.+.+|.+.
T Consensus 276 ~~~L~~L~ls~N~l~ 290 (454)
T 1jl5_A 276 PQSLTFLDVSENIFS 290 (454)
T ss_dssp CTTCCEEECCSSCCS
T ss_pred cCcCCEEECcCCccC
Confidence 666666666666544
No 348
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.66 E-value=1.5e-16 Score=164.67 Aligned_cols=148 Identities=26% Similarity=0.352 Sum_probs=129.4
Q ss_pred EeecCceeEEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCCCcc--ccCcEEEecCCcCCCCCcchhhcccccc
Q 004994 67 FCVFSNVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSNLP--VTVRNFSLSGNQLTGSIPESLSRLTQLL 144 (720)
Q Consensus 67 ~c~~~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~--~~L~~L~Ls~N~l~g~~p~~l~~l~~L~ 144 (720)
+..+++|+.|+|++|++++..+ +..+++|+.|+|++|++++ +|. +. .+|+.|+|++|++++ + +.+.++++|+
T Consensus 64 ~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~L~~n~i~~-~-~~l~~l~~L~ 137 (291)
T 1h6t_A 64 IQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LSS-LKDLKKLKSLSLEHNGISD-I-NGLVHLPQLE 137 (291)
T ss_dssp GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GGG-GTTCTTCCEEECTTSCCCC-C-GGGGGCTTCC
T ss_pred HhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Chh-hccCCCCCEEECCCCcCCC-C-hhhcCCCCCC
Confidence 5668899999999999998655 9999999999999999985 554 44 789999999999995 4 4699999999
Q ss_pred cccccccccCCCCCchhcCCCCCceEeccCCcccccCCCCCCCCCCCceeecccccccccccccccc-ccceEEccCCcC
Q 004994 145 DLSLNNNHLNGGIPDAFHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNNKLSGTLNVLEDL-HLIDLNIENNLF 223 (720)
Q Consensus 145 ~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~-~l~~l~l~~N~l 223 (720)
.|+|++|++++. ..+..+++|+.|+|++|++++..| +..+++|+.|+|++|.|++... +..+ .|+.|++++|++
T Consensus 138 ~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~l~~-l~~l~~L~~L~l~~n~i 212 (291)
T 1h6t_A 138 SLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDLRA-LAGLKNLDVLELFSQEC 212 (291)
T ss_dssp EEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBCGG-GTTCTTCSEEEEEEEEE
T ss_pred EEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcCCCChh-hccCCCCCEEECcCCcc
Confidence 999999999964 679999999999999999996444 9999999999999999998654 5555 499999999999
Q ss_pred cc
Q 004994 224 SG 225 (720)
Q Consensus 224 ~g 225 (720)
+.
T Consensus 213 ~~ 214 (291)
T 1h6t_A 213 LN 214 (291)
T ss_dssp EC
T ss_pred cC
Confidence 85
No 349
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.66 E-value=3.7e-16 Score=177.44 Aligned_cols=155 Identities=25% Similarity=0.320 Sum_probs=121.9
Q ss_pred EeecCceeEEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCCCcc--ccCcEEEecCCcCCCCCcchhhcccccc
Q 004994 67 FCVFSNVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSNLP--VTVRNFSLSGNQLTGSIPESLSRLTQLL 144 (720)
Q Consensus 67 ~c~~~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~--~~L~~L~Ls~N~l~g~~p~~l~~l~~L~ 144 (720)
+..+++|+.|+|++|+|++..+ +..+++|+.|+|++|+|++ +| .+. .+|+.|+|++|+|++ + +.+.+|++|+
T Consensus 61 l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~ 134 (605)
T 1m9s_A 61 IQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLE 134 (605)
T ss_dssp GGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCS
T ss_pred HccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEEecCCCCCC-C-ccccCCCccC
Confidence 4567888999999999887654 8888999999999998884 44 443 688999999999885 4 3588888999
Q ss_pred cccccccccCCCCCchhcCCCCCceEeccCCcccccCCCCCCCCCCCceeeccccccccccccccccc-cceEEccCCcC
Q 004994 145 DLSLNNNHLNGGIPDAFHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNNKLSGTLNVLEDLH-LIDLNIENNLF 223 (720)
Q Consensus 145 ~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~-l~~l~l~~N~l 223 (720)
.|+|++|+|++. ..|..|++|+.|+|++|.|++..| +..+++|+.|+|++|+|++. +.+..+. |+.|+|++|.+
T Consensus 135 ~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l-~~l~~l~~L~~L~L~~N~l 209 (605)
T 1m9s_A 135 SLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL-RALAGLKNLDVLELFSQEC 209 (605)
T ss_dssp EEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC-GGGTTCTTCSEEECCSEEE
T ss_pred EEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCCCC-hHHccCCCCCEEEccCCcC
Confidence 999999998864 578888999999999999986555 88888999999999988876 3455544 88899999988
Q ss_pred cccCCcccC
Q 004994 224 SGPIPEKLL 232 (720)
Q Consensus 224 ~g~~p~~~~ 232 (720)
++.....+.
T Consensus 210 ~~~p~~~~~ 218 (605)
T 1m9s_A 210 LNKPINHQS 218 (605)
T ss_dssp ECCCCCCCS
T ss_pred cCCcccccc
Confidence 864333333
No 350
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.66 E-value=3.7e-16 Score=149.06 Aligned_cols=131 Identities=24% Similarity=0.333 Sum_probs=117.3
Q ss_pred ccEEeccCCcccccCCCCccccCcEEEecCCcCCCCCcchhhcccccccccccccccCCCCCchhcCCCCCceEeccCCc
Q 004994 97 VINIDLSNNHIGGSIPSNLPVTVRNFSLSGNQLTGSIPESLSRLTQLLDLSLNNNHLNGGIPDAFHQFTGLINFDLSANN 176 (720)
Q Consensus 97 L~~L~L~~N~l~g~ip~~~~~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~ 176 (720)
.+.+++++|+++ .+|..++.+|+.|+|++|++++..+..|.++++|++|+|++|+|++..+..|.++++|+.|+|++|+
T Consensus 9 ~~~l~~~~~~l~-~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~ 87 (177)
T 2o6r_A 9 GTEIRCNSKGLT-SVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENK 87 (177)
T ss_dssp TTEEECCSSCCS-SCCTTCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred CCEEEecCCCCc-cCCCCCCCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCC
Confidence 578999999999 8898888999999999999997777778999999999999999997777778999999999999999
Q ss_pred ccccCCCCCCCCCCCceeecccccccccccc-cccc-ccceEEccCCcCcccCC
Q 004994 177 LTGQLPPSTRNLSSLYSLHLQNNKLSGTLNV-LEDL-HLIDLNIENNLFSGPIP 228 (720)
Q Consensus 177 l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~-~l~~l~l~~N~l~g~~p 228 (720)
|++..+..+..+++|+.|+|++|+|++.++. +..+ .|+.|++++|.+++..|
T Consensus 88 l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 88 LQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred ccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 9976677789999999999999999988764 3545 49999999999998766
No 351
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.66 E-value=2.1e-16 Score=179.42 Aligned_cols=164 Identities=23% Similarity=0.298 Sum_probs=138.2
Q ss_pred eecCceeEEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCCCcc--ccCcEEEecCCcCCCCCcchhhccccccc
Q 004994 68 CVFSNVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSNLP--VTVRNFSLSGNQLTGSIPESLSRLTQLLD 145 (720)
Q Consensus 68 c~~~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~--~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~ 145 (720)
..+.+|+.|+|++|.+... + .|..|++|+.|+|++|+|++..| +. .+|+.|+|++|+|++ +| .|..+++|+.
T Consensus 40 ~~L~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~ 113 (605)
T 1m9s_A 40 NELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKS 113 (605)
T ss_dssp HHHTTCCCCBCTTCCCCCC-T-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCE
T ss_pred hcCCCCCEEECcCCCCCCC-h-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCE
Confidence 3578899999999999864 3 69999999999999999996554 54 789999999999995 44 7999999999
Q ss_pred ccccccccCCCCCchhcCCCCCceEeccCCcccccCCCCCCCCCCCceeecccccccccccccccc-ccceEEccCCcCc
Q 004994 146 LSLNNNHLNGGIPDAFHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNNKLSGTLNVLEDL-HLIDLNIENNLFS 224 (720)
Q Consensus 146 L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~-~l~~l~l~~N~l~ 224 (720)
|+|++|+|++ + +.+..|++|+.|+|++|.|++. ..+..|++|+.|+|++|.|++.++ +..+ .|+.|+|++|+|+
T Consensus 114 L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~-l~~l~~L~~L~Ls~N~i~ 188 (605)
T 1m9s_A 114 LSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP-LAGLTKLQNLYLSKNHIS 188 (605)
T ss_dssp EECTTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCC
T ss_pred EEecCCCCCC-C-ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh-hccCCCCCEEECcCCCCC
Confidence 9999999985 4 4699999999999999999954 678999999999999999999887 5555 4999999999999
Q ss_pred ccCCcccCCCccccccCccC
Q 004994 225 GPIPEKLLSIPNFRKDGNPF 244 (720)
Q Consensus 225 g~~p~~~~~l~~l~~~~n~~ 244 (720)
+. | .+..+++|+.++...
T Consensus 189 ~l-~-~l~~l~~L~~L~L~~ 206 (605)
T 1m9s_A 189 DL-R-ALAGLKNLDVLELFS 206 (605)
T ss_dssp BC-G-GGTTCTTCSEEECCS
T ss_pred CC-h-HHccCCCCCEEEccC
Confidence 64 4 466666665444433
No 352
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.65 E-value=3.1e-16 Score=148.22 Aligned_cols=133 Identities=25% Similarity=0.312 Sum_probs=115.5
Q ss_pred CCCCccEEeccCCccc-ccCCCCcc--ccCcEEEecCCcCCCCCcchhhcccccccccccccccCCCCCchhcCCCCCce
Q 004994 93 DLESVINIDLSNNHIG-GSIPSNLP--VTVRNFSLSGNQLTGSIPESLSRLTQLLDLSLNNNHLNGGIPDAFHQFTGLIN 169 (720)
Q Consensus 93 ~l~~L~~L~L~~N~l~-g~ip~~~~--~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~ 169 (720)
..++|+.|+|++|+++ +.+|..+. .+|+.|+|++|.+++. ..+..+++|++|+|++|++++.+|..+.++++|+.
T Consensus 22 ~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 99 (168)
T 2ell_A 22 TPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTH 99 (168)
T ss_dssp CTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCE
T ss_pred CcccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCE
Confidence 3478999999999998 88998875 7899999999999965 78999999999999999999888888888999999
Q ss_pred EeccCCcccccCC--CCCCCCCCCceeeccccccccccc----cccccc-cceEEccCCcCcccCCc
Q 004994 170 FDLSANNLTGQLP--PSTRNLSSLYSLHLQNNKLSGTLN----VLEDLH-LIDLNIENNLFSGPIPE 229 (720)
Q Consensus 170 L~ls~N~l~g~~p--~~~~~l~~L~~L~l~~N~l~~~~~----~~~~~~-l~~l~l~~N~l~g~~p~ 229 (720)
|+|++|+|++ +| ..+..+++|+.|+|++|.+++.++ .+..+. |+.|++++|.+. .+|+
T Consensus 100 L~Ls~N~l~~-~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~-~~~~ 164 (168)
T 2ell_A 100 LNLSGNKLKD-ISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ-EAPD 164 (168)
T ss_dssp EECBSSSCCS-SGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC-BCCS
T ss_pred EeccCCccCc-chhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh-hccc
Confidence 9999999985 44 688999999999999999998876 555554 999999999887 5554
No 353
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.65 E-value=6.3e-16 Score=149.63 Aligned_cols=126 Identities=30% Similarity=0.396 Sum_probs=116.6
Q ss_pred cEEeccCCcccccCCCCccccCcEEEecCCcCCCCCcchhhcccccccccccccccCCCCCchhcCCCCCceEeccCCcc
Q 004994 98 INIDLSNNHIGGSIPSNLPVTVRNFSLSGNQLTGSIPESLSRLTQLLDLSLNNNHLNGGIPDAFHQFTGLINFDLSANNL 177 (720)
Q Consensus 98 ~~L~L~~N~l~g~ip~~~~~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l 177 (720)
+.+++++|+|+ .+|..++.+|+.|+|++|+|+ .+|..|.++++|+.|+|++|+|++..|..|.++++|+.|+|++|+|
T Consensus 13 ~~l~~~~~~l~-~ip~~~~~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l 90 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIPRDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRL 90 (193)
T ss_dssp TEEECTTSCCS-SCCSCCCTTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred CEEEcCCCCCC-cCCCCCCCCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCcc
Confidence 58999999999 899999999999999999999 8889999999999999999999988888999999999999999999
Q ss_pred cccCCCCCCCCCCCceeeccccccccccc-cccccc-cceEEccCCcCcc
Q 004994 178 TGQLPPSTRNLSSLYSLHLQNNKLSGTLN-VLEDLH-LIDLNIENNLFSG 225 (720)
Q Consensus 178 ~g~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~~-l~~l~l~~N~l~g 225 (720)
++..|..|.++++|+.|+|++|+|++.++ .+..+. |+.|+|++|.+..
T Consensus 91 ~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 91 RCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp CBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 98778889999999999999999998876 355554 9999999999975
No 354
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.65 E-value=4.7e-16 Score=165.53 Aligned_cols=186 Identities=18% Similarity=0.141 Sum_probs=141.4
Q ss_pred CCCCCceeEeec-----------CceeEEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCCCcc---ccC-cEEE
Q 004994 59 CGDSWQGVFCVF-----------SNVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSNLP---VTV-RNFS 123 (720)
Q Consensus 59 c~~~w~gv~c~~-----------~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~---~~L-~~L~ 123 (720)
|.|+|..|.|.. .++++|+|++|+|+...+..|.++++|++|+|++|++.+.+|.... .++ +.+.
T Consensus 7 C~C~~~~v~C~~~~Lt~iP~~l~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~ 86 (350)
T 4ay9_X 7 CHCSNRVFLCQESKVTEIPSDLPRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRI 86 (350)
T ss_dssp SEEETTEEEEESTTCCSCCTTCCTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEE
T ss_pred cEeeCCEEEecCCCCCccCcCcCCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhc
Confidence 767899999963 3689999999999977777899999999999999999878886543 344 4577
Q ss_pred ecCCcCCCCCcchhhcccccccccccccccCCCCCchhcCCCCCceEeccC-CcccccCCCCCCCCC-CCceeecccccc
Q 004994 124 LSGNQLTGSIPESLSRLTQLLDLSLNNNHLNGGIPDAFHQFTGLINFDLSA-NNLTGQLPPSTRNLS-SLYSLHLQNNKL 201 (720)
Q Consensus 124 Ls~N~l~g~~p~~l~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~-N~l~g~~p~~~~~l~-~L~~L~l~~N~l 201 (720)
+++|+++...|..|.++++|++|++++|+|++..+..+....++..|++++ |++....+..+..+. .|+.|+|++|+|
T Consensus 87 ~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i 166 (350)
T 4ay9_X 87 EKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGI 166 (350)
T ss_dssp EEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCC
T ss_pred ccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccc
Confidence 889999988888999999999999999999977666777777788888855 567644445566654 578888888888
Q ss_pred cccccc-ccccccceEEccC-CcCcccCCc-ccCCCccccccCccCC
Q 004994 202 SGTLNV-LEDLHLIDLNIEN-NLFSGPIPE-KLLSIPNFRKDGNPFN 245 (720)
Q Consensus 202 ~~~~~~-~~~~~l~~l~l~~-N~l~g~~p~-~~~~l~~l~~~~n~~~ 245 (720)
+..++. +...+++.|++++ |.++ .+|. .|..+++|+..+.+.|
T Consensus 167 ~~i~~~~f~~~~L~~l~l~~~n~l~-~i~~~~f~~l~~L~~LdLs~N 212 (350)
T 4ay9_X 167 QEIHNSAFNGTQLDELNLSDNNNLE-ELPNDVFHGASGPVILDISRT 212 (350)
T ss_dssp CEECTTSSTTEEEEEEECTTCTTCC-CCCTTTTTTEECCSEEECTTS
T ss_pred cCCChhhccccchhHHhhccCCccc-CCCHHHhccCcccchhhcCCC
Confidence 876643 3445588888875 4444 5664 4566666555444444
No 355
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.65 E-value=1.2e-16 Score=147.89 Aligned_cols=127 Identities=20% Similarity=0.259 Sum_probs=103.0
Q ss_pred cCceeEEEecCCccc-ccCCcCcCCCCCccEEeccCCcccccCCCCcc--ccCcEEEecCCcCCCCCcchhhcccccccc
Q 004994 70 FSNVTEIRLTGMNLG-GVLADTLGDLESVINIDLSNNHIGGSIPSNLP--VTVRNFSLSGNQLTGSIPESLSRLTQLLDL 146 (720)
Q Consensus 70 ~~~l~~l~L~~n~l~-~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~--~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L 146 (720)
.++++.|+|++|+++ +.+|..+..+++|+.|+|++|++++. ..+. .+|+.|+|++|++++.+|..+.++++|+.|
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 357899999999998 78888889999999999999999854 4444 688888888888887788888888888888
Q ss_pred cccccccCCC-CCchhcCCCCCceEeccCCcccccCC---CCCCCCCCCceeeccc
Q 004994 147 SLNNNHLNGG-IPDAFHQFTGLINFDLSANNLTGQLP---PSTRNLSSLYSLHLQN 198 (720)
Q Consensus 147 ~l~~N~l~g~-~p~~~~~l~~L~~L~ls~N~l~g~~p---~~~~~l~~L~~L~l~~ 198 (720)
+|++|++++. .|..+..+++|+.|++++|.+++..+ ..+..+++|+.|++++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 8888888863 34778888888888888888885443 3678888888888763
No 356
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.65 E-value=1.7e-17 Score=193.14 Aligned_cols=177 Identities=16% Similarity=0.162 Sum_probs=124.3
Q ss_pred ceeEeecCceeEEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCCCcc--ccCcEEEecCCcCCCCCcchhhccc
Q 004994 64 QGVFCVFSNVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSNLP--VTVRNFSLSGNQLTGSIPESLSRLT 141 (720)
Q Consensus 64 ~gv~c~~~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~--~~L~~L~Ls~N~l~g~~p~~l~~l~ 141 (720)
.+.+..+.+|+.|+|++|++. .+|..+..+++|++|+|++|+|+ .+|..|. .+|+.|+|++|+|+ .+|..|++|+
T Consensus 217 ~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~ 293 (727)
T 4b8c_D 217 KDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCF 293 (727)
T ss_dssp -----CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGT
T ss_pred hhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCC
Confidence 566778899999999999998 67888889999999999999999 9998886 79999999999999 8899999999
Q ss_pred ccccccccccccCCCCCchhcCCCCCceEeccCCcccccCCCCCCCCCC-CceeeccccccccccccccccccceEEccC
Q 004994 142 QLLDLSLNNNHLNGGIPDAFHQFTGLINFDLSANNLTGQLPPSTRNLSS-LYSLHLQNNKLSGTLNVLEDLHLIDLNIEN 220 (720)
Q Consensus 142 ~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~-L~~L~l~~N~l~~~~~~~~~~~l~~l~l~~ 220 (720)
+|++|+|++|.|+ .+|..|++|++|+.|+|++|.|++.+|..+..+.. +..|+|++|.++|.++. .|..|++++
T Consensus 294 ~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~----~l~~l~l~~ 368 (727)
T 4b8c_D 294 QLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPH----ERRFIEINT 368 (727)
T ss_dssp TCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCC----C--------
T ss_pred CCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCcc----ccceeEeec
Confidence 9999999999997 88999999999999999999999999988766532 33588999999988753 244566666
Q ss_pred C--------cCcccCCcccCCCccccccCccCCCcc
Q 004994 221 N--------LFSGPIPEKLLSIPNFRKDGNPFNTTV 248 (720)
Q Consensus 221 N--------~l~g~~p~~~~~l~~l~~~~n~~~~~~ 248 (720)
| .|.+.++..+.++..+.+....+|..+
T Consensus 369 n~~~~~~~~~l~~~~~~~~~~l~~~~~~~ls~Nil~ 404 (727)
T 4b8c_D 369 DGEPQREYDSLQQSTEHLATDLAKRTFTVLSYNTLC 404 (727)
T ss_dssp ---------------------------------CCC
T ss_pred ccccccccCCccccccchhhcccccceeeeeccccc
Confidence 6 344444444555555555555566543
No 357
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.63 E-value=6.5e-16 Score=171.24 Aligned_cols=164 Identities=27% Similarity=0.356 Sum_probs=104.7
Q ss_pred EeecCceeEEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCCCcc--ccCcEEEecCCcCCCCCcchhhcccccc
Q 004994 67 FCVFSNVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSNLP--VTVRNFSLSGNQLTGSIPESLSRLTQLL 144 (720)
Q Consensus 67 ~c~~~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~--~~L~~L~Ls~N~l~g~~p~~l~~l~~L~ 144 (720)
++.+++|+.|+|++|.+++..| ++.+++|+.|+|++|++++ ++ .+. .+|+.|+|++|++++..| +..+++|+
T Consensus 195 l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~ 268 (466)
T 1o6v_A 195 LAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKD-IG-TLASLTNLTDLDLANNQISNLAP--LSGLTKLT 268 (466)
T ss_dssp GGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC-CG-GGGGCTTCSEEECCSSCCCCCGG--GTTCTTCS
T ss_pred hccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCccc-ch-hhhcCCCCCEEECCCCccccchh--hhcCCCCC
Confidence 4556778888888888876554 6667777777777777763 33 232 567777777777775443 66777777
Q ss_pred cccccccccCCCCCchhcCCCCCceEeccCCcccccCCCCCCCCCCCceeeccccccccccccccccccceEEccCCcCc
Q 004994 145 DLSLNNNHLNGGIPDAFHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNNKLSGTLNVLEDLHLIDLNIENNLFS 224 (720)
Q Consensus 145 ~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~l~l~~N~l~ 224 (720)
.|+|++|.+++..| +..+++|+.|+|++|++++..| +..+++|+.|+|++|++++..+......|+.|++++|+++
T Consensus 269 ~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~l~~n~l~ 344 (466)
T 1o6v_A 269 ELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVS 344 (466)
T ss_dssp EEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGGGGGCTTCCEEECCSSCCC
T ss_pred EEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchhhccCccCCEeECCCCccC
Confidence 77777777764333 6677777777777777764332 6667777777777777766655222223666777777666
Q ss_pred ccCCcccCCCccccccCc
Q 004994 225 GPIPEKLLSIPNFRKDGN 242 (720)
Q Consensus 225 g~~p~~~~~l~~l~~~~n 242 (720)
+. ..+..+++|+..+.
T Consensus 345 ~~--~~l~~l~~L~~L~l 360 (466)
T 1o6v_A 345 DV--SSLANLTNINWLSA 360 (466)
T ss_dssp CC--GGGTTCTTCCEEEC
T ss_pred Cc--hhhccCCCCCEEeC
Confidence 53 24444444444333
No 358
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.63 E-value=2.3e-15 Score=165.86 Aligned_cols=144 Identities=19% Similarity=0.202 Sum_probs=102.0
Q ss_pred EeecCceeEEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCCCcc--ccCcEEEecCCcCCCCCcchhhcccccc
Q 004994 67 FCVFSNVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSNLP--VTVRNFSLSGNQLTGSIPESLSRLTQLL 144 (720)
Q Consensus 67 ~c~~~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~--~~L~~L~Ls~N~l~g~~p~~l~~l~~L~ 144 (720)
++.+++|+.|+|++|++++. | ++.+++|++|+|++|+|++ +| +. .+|++|+|++|++++ +| ++++++|+
T Consensus 60 l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~-~~--~~~l~~L~~L~L~~N~l~~-l~--~~~l~~L~ 130 (457)
T 3bz5_A 60 IEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTN-LD--VTPLTKLTYLNCDTNKLTK-LD--VSQNPLLT 130 (457)
T ss_dssp GGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSC-CC--CTTCTTCCEEECCSSCCSC-CC--CTTCTTCC
T ss_pred hcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCce-ee--cCCCCcCCEEECCCCcCCe-ec--CCCCCcCC
Confidence 45677888888888888874 3 8888888888888888885 44 43 678888888888885 44 78888888
Q ss_pred cccccccccCCCCCchhcCCCCCceEeccCCcccccCCCCCCCCCCCceeecccccccccccccccc-ccceEEccCCcC
Q 004994 145 DLSLNNNHLNGGIPDAFHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNNKLSGTLNVLEDL-HLIDLNIENNLF 223 (720)
Q Consensus 145 ~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~-~l~~l~l~~N~l 223 (720)
.|++++|+|++ ++ ++++++|++|++++|+..+.+ .+..+++|+.|+|++|+|++.+ +..+ .|+.|++++|++
T Consensus 131 ~L~l~~N~l~~-l~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~l~--l~~l~~L~~L~l~~N~l 203 (457)
T 3bz5_A 131 YLNCARNTLTE-ID--VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITELD--VSQNKLLNRLNCDTNNI 203 (457)
T ss_dssp EEECTTSCCSC-CC--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCCCC--CTTCTTCCEEECCSSCC
T ss_pred EEECCCCccce-ec--cccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCccceec--cccCCCCCEEECcCCcC
Confidence 88888888876 33 667777777777777555555 3666677777777777766643 2222 256666666666
Q ss_pred ccc
Q 004994 224 SGP 226 (720)
Q Consensus 224 ~g~ 226 (720)
++.
T Consensus 204 ~~~ 206 (457)
T 3bz5_A 204 TKL 206 (457)
T ss_dssp SCC
T ss_pred Cee
Confidence 543
No 359
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.63 E-value=3.5e-16 Score=152.09 Aligned_cols=147 Identities=16% Similarity=0.248 Sum_probs=122.2
Q ss_pred cCCCCCccEEeccCCcccccCCCCcc--ccCcEEEecCCcCCCCCcchhhcccccccccccccccCCCCCchhcCCCCCc
Q 004994 91 LGDLESVINIDLSNNHIGGSIPSNLP--VTVRNFSLSGNQLTGSIPESLSRLTQLLDLSLNNNHLNGGIPDAFHQFTGLI 168 (720)
Q Consensus 91 ~~~l~~L~~L~L~~N~l~g~ip~~~~--~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~ 168 (720)
.+.+++|+.|+|++|+++ .+| .+. .+|+.|+|++|.++ . ++.+..+++|++|+|++|++++..|..|+.+++|+
T Consensus 40 ~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~-~-~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~ 115 (197)
T 4ezg_A 40 EAQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT-N-YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLT 115 (197)
T ss_dssp HHHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS-C-CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCC
T ss_pred hhhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC-c-chhhhcCCCCCEEEeECCccCcccChhhcCCCCCC
Confidence 366889999999999999 777 554 79999999999776 3 34799999999999999999988899999999999
Q ss_pred eEeccCCcccccCCCCCCCCCCCceeeccccc-cccccccccccc-cceEEccCCcCcccCCcccCCCcccc---ccCcc
Q 004994 169 NFDLSANNLTGQLPPSTRNLSSLYSLHLQNNK-LSGTLNVLEDLH-LIDLNIENNLFSGPIPEKLLSIPNFR---KDGNP 243 (720)
Q Consensus 169 ~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~-l~~~~~~~~~~~-l~~l~l~~N~l~g~~p~~~~~l~~l~---~~~n~ 243 (720)
+|+|++|++++..|..+..+++|+.|+|++|. ++.. +.+..+. |+.|++++|.+++ ++ .+..+++|+ +.+|+
T Consensus 116 ~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~-~~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~N~ 192 (197)
T 4ezg_A 116 LLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDI-MPLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLYAFSQT 192 (197)
T ss_dssp EEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCC-GGGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEEECBC-
T ss_pred EEEecCCccCcHhHHHHhhCCCCCEEEccCCCCcccc-HhhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEEeeCcc
Confidence 99999999998888889999999999999998 5554 4555554 9999999999996 44 455555544 45554
Q ss_pred C
Q 004994 244 F 244 (720)
Q Consensus 244 ~ 244 (720)
+
T Consensus 193 i 193 (197)
T 4ezg_A 193 I 193 (197)
T ss_dssp -
T ss_pred c
Confidence 3
No 360
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.63 E-value=2e-15 Score=166.47 Aligned_cols=162 Identities=19% Similarity=0.201 Sum_probs=129.5
Q ss_pred EeecCceeEEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCCCccccCcEEEecCCcCCCCCcchhhcccccccc
Q 004994 67 FCVFSNVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSNLPVTVRNFSLSGNQLTGSIPESLSRLTQLLDL 146 (720)
Q Consensus 67 ~c~~~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L 146 (720)
++.+++|+.|+|++|+|++. + ++.+++|++|+|++|+|++ +|-.-..+|+.|+|++|+|++ ++ ++++++|+.|
T Consensus 81 ~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L~~N~l~~-l~~~~l~~L~~L~l~~N~l~~-l~--l~~l~~L~~L 153 (457)
T 3bz5_A 81 LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLNCDTNKLTK-LDVSQNPLLTYLNCARNTLTE-ID--VSHNTQLTEL 153 (457)
T ss_dssp CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEECCSSCCSC-CCCTTCTTCCEEECTTSCCSC-CC--CTTCTTCCEE
T ss_pred cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEECCCCcCCe-ecCCCCCcCCEEECCCCccce-ec--cccCCcCCEE
Confidence 45678999999999999985 3 8999999999999999995 662222789999999999996 44 8889999999
Q ss_pred cccccccCCCCCchhcCCCCCceEeccCCcccccCCCCCCCCCCCceeecccccccccccccccc-ccceEEccCCcCcc
Q 004994 147 SLNNNHLNGGIPDAFHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNNKLSGTLNVLEDL-HLIDLNIENNLFSG 225 (720)
Q Consensus 147 ~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~-~l~~l~l~~N~l~g 225 (720)
++++|+..+.+ .+..+++|+.|++++|+|++ +| +..+++|+.|++++|+|++. + +..+ .|+.|++++|+|++
T Consensus 154 ~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~-~-l~~l~~L~~L~Ls~N~l~~ 226 (457)
T 3bz5_A 154 DCHLNKKITKL--DVTPQTQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL-D-LNQNIQLTFLDCSSNKLTE 226 (457)
T ss_dssp ECTTCSCCCCC--CCTTCTTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC-C-CTTCTTCSEEECCSSCCSC
T ss_pred ECCCCCccccc--ccccCCcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee-c-cccCCCCCEEECcCCcccc
Confidence 99999766666 47888999999999999985 66 78889999999999998886 2 4444 48889999999987
Q ss_pred cCCcccCCCccccccCccCC
Q 004994 226 PIPEKLLSIPNFRKDGNPFN 245 (720)
Q Consensus 226 ~~p~~~~~l~~l~~~~n~~~ 245 (720)
+| +..+++|+..+...|
T Consensus 227 -ip--~~~l~~L~~L~l~~N 243 (457)
T 3bz5_A 227 -ID--VTPLTQLTYFDCSVN 243 (457)
T ss_dssp -CC--CTTCTTCSEEECCSS
T ss_pred -cC--ccccCCCCEEEeeCC
Confidence 56 555555554444443
No 361
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.62 E-value=2.2e-16 Score=160.91 Aligned_cols=148 Identities=22% Similarity=0.266 Sum_probs=113.4
Q ss_pred EeecCceeEEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCCCcc--ccCcEEEecCCcCCCCCcchhhcccccc
Q 004994 67 FCVFSNVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSNLP--VTVRNFSLSGNQLTGSIPESLSRLTQLL 144 (720)
Q Consensus 67 ~c~~~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~--~~L~~L~Ls~N~l~g~~p~~l~~l~~L~ 144 (720)
+..+++|+.|+|++|+++. ++ .+..+++|+.|+|++|+|++..| +. .+|+.|+|++|++++ +|.. .. ++|+
T Consensus 37 ~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~N~l~~-l~~~-~~-~~L~ 109 (263)
T 1xeu_A 37 QKELSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVNRNRLKN-LNGI-PS-ACLS 109 (263)
T ss_dssp HHHHTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCSSCCSC-CTTC-CC-SSCC
T ss_pred hhhcCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECCCCccCC-cCcc-cc-Cccc
Confidence 3456788888888888885 44 68888888888888888885433 44 678888888888884 4543 33 8888
Q ss_pred cccccccccCCCCCchhcCCCCCceEeccCCcccccCCCCCCCCCCCceeeccccccccccccccccc-cceEEccCCcC
Q 004994 145 DLSLNNNHLNGGIPDAFHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNNKLSGTLNVLEDLH-LIDLNIENNLF 223 (720)
Q Consensus 145 ~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~-l~~l~l~~N~l 223 (720)
.|+|++|+|++ +| .+..+++|+.|+|++|+|++ +| .+..+++|+.|+|++|++++. ..+..+. |+.|++++|.+
T Consensus 110 ~L~L~~N~l~~-~~-~l~~l~~L~~L~Ls~N~i~~-~~-~l~~l~~L~~L~L~~N~i~~~-~~l~~l~~L~~L~l~~N~~ 184 (263)
T 1xeu_A 110 RLFLDNNELRD-TD-SLIHLKNLEILSIRNNKLKS-IV-MLGFLSKLEVLDLHGNEITNT-GGLTRLKKVNWIDLTGQKC 184 (263)
T ss_dssp EEECCSSCCSB-SG-GGTTCTTCCEEECTTSCCCB-CG-GGGGCTTCCEEECTTSCCCBC-TTSTTCCCCCEEEEEEEEE
T ss_pred EEEccCCccCC-Ch-hhcCcccccEEECCCCcCCC-Ch-HHccCCCCCEEECCCCcCcch-HHhccCCCCCEEeCCCCcc
Confidence 88888888885 33 58888888888888888884 44 678888888888888888877 4444444 88888888888
Q ss_pred ccc
Q 004994 224 SGP 226 (720)
Q Consensus 224 ~g~ 226 (720)
++.
T Consensus 185 ~~~ 187 (263)
T 1xeu_A 185 VNE 187 (263)
T ss_dssp ECC
T ss_pred cCC
Confidence 754
No 362
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.62 E-value=1.7e-16 Score=167.51 Aligned_cols=144 Identities=15% Similarity=0.113 Sum_probs=101.1
Q ss_pred HHHHHhcCCCCCCeeccCCCceEEEEEeCCCcEEEEEEecccccc------------cccHHH--------HHHHHHHHH
Q 004994 434 SLQQYTNSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQ------------RQTDEE--------FLELASTIS 493 (720)
Q Consensus 434 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~------------~~~~~~--------~~~e~~~l~ 493 (720)
.+..-..-|.+++.||+|++|.||+|...+|+.||||+++..... ...... ..+|...|.
T Consensus 89 ~L~~rg~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~ 168 (397)
T 4gyi_A 89 THAARKDVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMK 168 (397)
T ss_dssp HHHHTTSCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHCCCEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHH
Confidence 333333448889999999999999998889999999997642110 001111 234556666
Q ss_pred ccCCCcee--EEEeEeccCCeEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCC
Q 004994 494 RLRHGNIV--ELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNF 571 (720)
Q Consensus 494 ~l~H~niv--~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDl 571 (720)
++.+.++. ..+++. ..++||||++++.|.++.... ....++.+++.+|.|||.. +||||||
T Consensus 169 rL~~~gv~vp~p~~~~----~~~LVME~i~G~~L~~l~~~~----------~~~~l~~qll~~l~~lH~~---gIVHrDL 231 (397)
T 4gyi_A 169 ALYEEGFPVPEPIAQS----RHTIVMSLVDALPMRQVSSVP----------DPASLYADLIALILRLAKH---GLIHGDF 231 (397)
T ss_dssp HHHHTTCSCCCEEEEE----TTEEEEECCSCEEGGGCCCCS----------CHHHHHHHHHHHHHHHHHT---TEECSCC
T ss_pred HHHhcCCCCCeeeecc----CceEEEEecCCccHhhhcccH----------HHHHHHHHHHHHHHHHHHC---CCcCCCC
Confidence 66444332 223221 237999999998887654211 1245788999999999987 8999999
Q ss_pred CCCCeEEcCCCC----------eEEccccCCCC
Q 004994 572 KSSNILLDEKLI----------VRVSDCGLAPL 594 (720)
Q Consensus 572 kp~NiLl~~~~~----------~kl~DFGla~~ 594 (720)
||.|||+++++. +.|+||+-+-.
T Consensus 232 Kp~NILl~~dgd~~d~~~~~~~~~iID~~Q~V~ 264 (397)
T 4gyi_A 232 NEFNILIREEKDAEDPSSITLTPIIIXFPQMVS 264 (397)
T ss_dssp STTSEEEEEEECSSCTTSEEEEEEECCCTTCEE
T ss_pred CHHHEEEeCCCCcccccccccceEEEEeCCccc
Confidence 999999988773 89999997754
No 363
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.62 E-value=7.1e-16 Score=157.07 Aligned_cols=160 Identities=25% Similarity=0.334 Sum_probs=104.5
Q ss_pred CceeEEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCCCcc--ccCcEEEecCCcCCCCCcchhhcccccccccc
Q 004994 71 SNVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSNLP--VTVRNFSLSGNQLTGSIPESLSRLTQLLDLSL 148 (720)
Q Consensus 71 ~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~--~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~l 148 (720)
.+++.++|.+|++++.. .+..+++|+.|+|++|+|+ .+| .+. .+|+.|+|++|+|++. |. +.++++|+.|+|
T Consensus 19 ~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~-~~-l~~l~~L~~L~L 92 (263)
T 1xeu_A 19 ANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDL-SP-LKDLTKLEELSV 92 (263)
T ss_dssp HHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCSSCCEEEC
T ss_pred HHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCC-hh-hccCCCCCEEEC
Confidence 34556667777776543 4667777777777777777 555 343 5777777777777743 33 777777777777
Q ss_pred cccccCCCCCchhcCCCCCceEeccCCcccccCCCCCCCCCCCceeeccccccccccccccccc-cceEEccCCcCcccC
Q 004994 149 NNNHLNGGIPDAFHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNNKLSGTLNVLEDLH-LIDLNIENNLFSGPI 227 (720)
Q Consensus 149 ~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~-l~~l~l~~N~l~g~~ 227 (720)
++|++++ +|.. .. ++|+.|+|++|+|++ ++ .+..+++|+.|+|++|+|++.. .+..+. |+.|++++|++++.
T Consensus 93 ~~N~l~~-l~~~-~~-~~L~~L~L~~N~l~~-~~-~l~~l~~L~~L~Ls~N~i~~~~-~l~~l~~L~~L~L~~N~i~~~- 165 (263)
T 1xeu_A 93 NRNRLKN-LNGI-PS-ACLSRLFLDNNELRD-TD-SLIHLKNLEILSIRNNKLKSIV-MLGFLSKLEVLDLHGNEITNT- 165 (263)
T ss_dssp CSSCCSC-CTTC-CC-SSCCEEECCSSCCSB-SG-GGTTCTTCCEEECTTSCCCBCG-GGGGCTTCCEEECTTSCCCBC-
T ss_pred CCCccCC-cCcc-cc-CcccEEEccCCccCC-Ch-hhcCcccccEEECCCCcCCCCh-HHccCCCCCEEECCCCcCcch-
Confidence 7777774 4432 22 777777777777774 43 4777777777777777777654 344443 77777777777755
Q ss_pred CcccCCCcccc---ccCccC
Q 004994 228 PEKLLSIPNFR---KDGNPF 244 (720)
Q Consensus 228 p~~~~~l~~l~---~~~n~~ 244 (720)
..+..+++|+ +.+|++
T Consensus 166 -~~l~~l~~L~~L~l~~N~~ 184 (263)
T 1xeu_A 166 -GGLTRLKKVNWIDLTGQKC 184 (263)
T ss_dssp -TTSTTCCCCCEEEEEEEEE
T ss_pred -HHhccCCCCCEEeCCCCcc
Confidence 4444444444 444443
No 364
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.62 E-value=1.2e-15 Score=169.20 Aligned_cols=171 Identities=25% Similarity=0.374 Sum_probs=138.0
Q ss_pred EeecCceeEEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCCCccccCcEEEecCCcCCCCCcchhhcccccccc
Q 004994 67 FCVFSNVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSNLPVTVRNFSLSGNQLTGSIPESLSRLTQLLDL 146 (720)
Q Consensus 67 ~c~~~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L 146 (720)
+..+++|+.|+|++|.+++. +.+..+++|+.|+|++|++++..|-....+|+.|+|++|++++ + +.+..+++|+.|
T Consensus 173 ~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L 248 (466)
T 1o6v_A 173 LANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKD-I-GTLASLTNLTDL 248 (466)
T ss_dssp GTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGGGGGCTTCCEEECCSSCCCC-C-GGGGGCTTCSEE
T ss_pred hccCCCCCEEECcCCcCCCC--hhhccCCCCCEEEecCCcccccccccccCCCCEEECCCCCccc-c-hhhhcCCCCCEE
Confidence 44568899999999999865 3588999999999999999977663334799999999999995 4 468999999999
Q ss_pred cccccccCCCCCchhcCCCCCceEeccCCcccccCCCCCCCCCCCceeeccccccccccccccccccceEEccCCcCccc
Q 004994 147 SLNNNHLNGGIPDAFHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNNKLSGTLNVLEDLHLIDLNIENNLFSGP 226 (720)
Q Consensus 147 ~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~l~l~~N~l~g~ 226 (720)
++++|.+++..| +..+++|+.|++++|.+++ +|. +..+++|+.|+|++|++++.++......|+.|++++|++++.
T Consensus 249 ~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~~~-~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~L~~n~l~~~ 324 (466)
T 1o6v_A 249 DLANNQISNLAP--LSGLTKLTELKLGANQISN-ISP-LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDI 324 (466)
T ss_dssp ECCSSCCCCCGG--GTTCTTCSEEECCSSCCCC-CGG-GTTCTTCSEEECCSSCCSCCGGGGGCTTCSEEECCSSCCSCC
T ss_pred ECCCCccccchh--hhcCCCCCEEECCCCccCc-ccc-ccCCCccCeEEcCCCcccCchhhcCCCCCCEEECcCCcCCCc
Confidence 999999996554 8999999999999999995 444 889999999999999999877633333499999999999987
Q ss_pred CCc-ccCCCccccccCccCC
Q 004994 227 IPE-KLLSIPNFRKDGNPFN 245 (720)
Q Consensus 227 ~p~-~~~~l~~l~~~~n~~~ 245 (720)
.|- .+.++..|.+.+|...
T Consensus 325 ~~~~~l~~L~~L~l~~n~l~ 344 (466)
T 1o6v_A 325 SPVSSLTKLQRLFFYNNKVS 344 (466)
T ss_dssp GGGGGCTTCCEEECCSSCCC
T ss_pred hhhccCccCCEeECCCCccC
Confidence 761 2334444445555543
No 365
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.62 E-value=1.1e-15 Score=162.38 Aligned_cols=168 Identities=21% Similarity=0.355 Sum_probs=125.1
Q ss_pred EeecCceeEEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCCCcc--ccCcEEEecCCcCCCCCcchhhcccccc
Q 004994 67 FCVFSNVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSNLP--VTVRNFSLSGNQLTGSIPESLSRLTQLL 144 (720)
Q Consensus 67 ~c~~~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~--~~L~~L~Ls~N~l~g~~p~~l~~l~~L~ 144 (720)
+..+++|+.|++++|.+.+..+ +..+++|+.|+|++|++.+ ++. +. .+|+.|++++|.+++..+ +..+++|+
T Consensus 151 ~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~-~~~-~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~ 224 (347)
T 4fmz_A 151 LSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIED-ISP-LASLTSLHYFTAYVNQITDITP--VANMTRLN 224 (347)
T ss_dssp GTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCC-CGG-GGGCTTCCEEECCSSCCCCCGG--GGGCTTCC
T ss_pred hhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCcccc-ccc-ccCCCccceeecccCCCCCCch--hhcCCcCC
Confidence 4566788899999988886544 8888889999999998884 433 33 678888888888885443 78888888
Q ss_pred cccccccccCCCCCchhcCCCCCceEeccCCcccccCCCCCCCCCCCceeecccccccccccccccc-ccceEEccCCcC
Q 004994 145 DLSLNNNHLNGGIPDAFHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNNKLSGTLNVLEDL-HLIDLNIENNLF 223 (720)
Q Consensus 145 ~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~-~l~~l~l~~N~l 223 (720)
.|+|++|++++ +|. +..+++|++|++++|.+++ + +.+..+++|+.|++++|++++. +.+..+ .|+.|++++|.+
T Consensus 225 ~L~l~~n~l~~-~~~-~~~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~L~~n~l 299 (347)
T 4fmz_A 225 SLKIGNNKITD-LSP-LANLSQLTWLEIGTNQISD-I-NAVKDLTKLKMLNVGSNQISDI-SVLNNLSQLNSLFLNNNQL 299 (347)
T ss_dssp EEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCC-C-GGGTTCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCC
T ss_pred EEEccCCccCC-Ccc-hhcCCCCCEEECCCCccCC-C-hhHhcCCCcCEEEccCCccCCC-hhhcCCCCCCEEECcCCcC
Confidence 88888888875 343 7888888888888888874 4 3577888888888888888776 334444 488888888888
Q ss_pred cccCCcccCCCccccccCccCC
Q 004994 224 SGPIPEKLLSIPNFRKDGNPFN 245 (720)
Q Consensus 224 ~g~~p~~~~~l~~l~~~~n~~~ 245 (720)
++..|..+..+++|+..+...|
T Consensus 300 ~~~~~~~l~~l~~L~~L~L~~n 321 (347)
T 4fmz_A 300 GNEDMEVIGGLTNLTTLFLSQN 321 (347)
T ss_dssp CGGGHHHHHTCTTCSEEECCSS
T ss_pred CCcChhHhhccccCCEEEccCC
Confidence 8777777666666554444433
No 366
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.62 E-value=2.6e-17 Score=185.79 Aligned_cols=153 Identities=24% Similarity=0.249 Sum_probs=122.2
Q ss_pred cCceeEEEecCCcccccCCcCcCCCCCccEEeccCCc-------------ccccCCCCcc--------------------
Q 004994 70 FSNVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNH-------------IGGSIPSNLP-------------------- 116 (720)
Q Consensus 70 ~~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~-------------l~g~ip~~~~-------------------- 116 (720)
.++|+.|+|++|+|+ .+|+.++++++|+.|++++|. +.+.+|..+.
T Consensus 348 ~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~~L~ 426 (567)
T 1dce_A 348 DEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLDDLR 426 (567)
T ss_dssp TTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHHHHH
T ss_pred CccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccchhh
Confidence 356778899999997 679999999999999997775 3444442211
Q ss_pred --------------ccCcEEEecCCcCCCCCcchhhcccccccccccccccCCCCCchhcCCCCCceEeccCCcccccCC
Q 004994 117 --------------VTVRNFSLSGNQLTGSIPESLSRLTQLLDLSLNNNHLNGGIPDAFHQFTGLINFDLSANNLTGQLP 182 (720)
Q Consensus 117 --------------~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p 182 (720)
..|+.|+|++|+|++ +|. |+++++|+.|+|++|+|+ .+|..|+++++|+.|+|++|+|++ +|
T Consensus 427 ~l~l~~n~i~~l~~~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp 502 (567)
T 1dce_A 427 SKFLLENSVLKMEYADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD 502 (567)
T ss_dssp HHHHHHHHHHHHHHTTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG
T ss_pred hhhhhcccccccCccCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc
Confidence 257788899998885 676 888888999999999888 788888888899999999999885 77
Q ss_pred CCCCCCCCCceeeccccccccc--cccccccc-cceEEccCCcCcccCC
Q 004994 183 PSTRNLSSLYSLHLQNNKLSGT--LNVLEDLH-LIDLNIENNLFSGPIP 228 (720)
Q Consensus 183 ~~~~~l~~L~~L~l~~N~l~~~--~~~~~~~~-l~~l~l~~N~l~g~~p 228 (720)
.++++++|+.|+|++|+|++. +..+..+. |+.|+|++|+|++.+|
T Consensus 503 -~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~ 550 (567)
T 1dce_A 503 -GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEG 550 (567)
T ss_dssp -GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSS
T ss_pred -ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCcc
Confidence 788888899999999988888 55666665 8889999998887655
No 367
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.62 E-value=3.7e-15 Score=164.14 Aligned_cols=158 Identities=25% Similarity=0.335 Sum_probs=124.9
Q ss_pred cCceeEEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCCCccccCcEEEecCCcCCCCCcchhhccccccccccc
Q 004994 70 FSNVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSNLPVTVRNFSLSGNQLTGSIPESLSRLTQLLDLSLN 149 (720)
Q Consensus 70 ~~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~l~ 149 (720)
.++|+.|+|++|++++ +|.. +++|+.|+|++|++++ +|. ++.+|++|+|++|++++ +| .|+++++|++|+++
T Consensus 90 ~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~-~~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~ 161 (454)
T 1jl5_A 90 PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSD-LPPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVD 161 (454)
T ss_dssp CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CCS-CCTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECC
T ss_pred cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc-ccC-CCCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECC
Confidence 4688999999999987 6653 4789999999999984 553 33689999999999995 77 59999999999999
Q ss_pred ccccCCCCCchhcCCCCCceEeccCCcccccCCCCCCCCCCCceeeccccccccccccccccccceEEccCCcCcccCCc
Q 004994 150 NNHLNGGIPDAFHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNNKLSGTLNVLEDLHLIDLNIENNLFSGPIPE 229 (720)
Q Consensus 150 ~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~l~l~~N~l~g~~p~ 229 (720)
+|++++ +|..+ .+|++|++++|++++ +| .++++++|+.|++++|++++.+... ..|+.|++++|.++ .+|.
T Consensus 162 ~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~l~~~~--~~L~~L~l~~n~l~-~lp~ 232 (454)
T 1jl5_A 162 NNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKKLPDLP--LSLESIVAGNNILE-ELPE 232 (454)
T ss_dssp SSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSSCCCCC--TTCCEEECCSSCCS-SCCC
T ss_pred CCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCcCCCCc--CcccEEECcCCcCC-cccc
Confidence 999985 66543 589999999999985 67 6899999999999999998855432 25888999999988 7774
Q ss_pred ccCCCccccccCccCC
Q 004994 230 KLLSIPNFRKDGNPFN 245 (720)
Q Consensus 230 ~~~~l~~l~~~~n~~~ 245 (720)
+..+++|+..+...|
T Consensus 233 -~~~l~~L~~L~l~~N 247 (454)
T 1jl5_A 233 -LQNLPFLTTIYADNN 247 (454)
T ss_dssp -CTTCTTCCEEECCSS
T ss_pred -cCCCCCCCEEECCCC
Confidence 767666665544444
No 368
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.61 E-value=1.1e-15 Score=162.40 Aligned_cols=163 Identities=23% Similarity=0.317 Sum_probs=120.2
Q ss_pred EeecCceeEEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCCCcc--ccCcEEEecCCcCCCCCcchhhcccccc
Q 004994 67 FCVFSNVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSNLP--VTVRNFSLSGNQLTGSIPESLSRLTQLL 144 (720)
Q Consensus 67 ~c~~~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~--~~L~~L~Ls~N~l~g~~p~~l~~l~~L~ 144 (720)
+..+++|+.|++++|.....++. +..+++|++|++++|++.+..+ +. .+|+.|++++|.+++ ++. +..+++|+
T Consensus 128 ~~~l~~L~~L~l~~n~~~~~~~~-~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~-~~~-~~~l~~L~ 202 (347)
T 4fmz_A 128 LANLTKMYSLNLGANHNLSDLSP-LSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIED-ISP-LASLTSLH 202 (347)
T ss_dssp GTTCTTCCEEECTTCTTCCCCGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCC-CGG-GGGCTTCC
T ss_pred hccCCceeEEECCCCCCcccccc-hhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCcccc-ccc-ccCCCccc
Confidence 45667888888888866554443 8888888888888888874433 33 688888888888884 444 88888888
Q ss_pred cccccccccCCCCCchhcCCCCCceEeccCCcccccCCCCCCCCCCCceeecccccccccccccccc-ccceEEccCCcC
Q 004994 145 DLSLNNNHLNGGIPDAFHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNNKLSGTLNVLEDL-HLIDLNIENNLF 223 (720)
Q Consensus 145 ~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~-~l~~l~l~~N~l 223 (720)
.|++++|.+++..+ +..+++|+.|+|++|++++ ++. +..+++|+.|+|++|.+++. +.+..+ .|+.|++++|++
T Consensus 203 ~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~-~~~-~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~l~~n~l 277 (347)
T 4fmz_A 203 YFTAYVNQITDITP--VANMTRLNSLKIGNNKITD-LSP-LANLSQLTWLEIGTNQISDI-NAVKDLTKLKMLNVGSNQI 277 (347)
T ss_dssp EEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCCC-GGGTTCTTCCEEECCSSCC
T ss_pred eeecccCCCCCCch--hhcCCcCCEEEccCCccCC-Ccc-hhcCCCCCEEECCCCccCCC-hhHhcCCCcCEEEccCCcc
Confidence 88888888885443 7888888888888888884 444 78888888888888888875 344444 488888888888
Q ss_pred cccCCcccCCCccccccC
Q 004994 224 SGPIPEKLLSIPNFRKDG 241 (720)
Q Consensus 224 ~g~~p~~~~~l~~l~~~~ 241 (720)
++. | .+..+++|+..+
T Consensus 278 ~~~-~-~~~~l~~L~~L~ 293 (347)
T 4fmz_A 278 SDI-S-VLNNLSQLNSLF 293 (347)
T ss_dssp CCC-G-GGGGCTTCSEEE
T ss_pred CCC-h-hhcCCCCCCEEE
Confidence 853 3 344444444433
No 369
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.61 E-value=1.4e-17 Score=180.03 Aligned_cols=163 Identities=20% Similarity=0.297 Sum_probs=95.2
Q ss_pred ecCceeEEEecCCcccc----cCCcCcCCCCCccEEeccCCcccccCCCCcc---------------ccCcEEEecCCcC
Q 004994 69 VFSNVTEIRLTGMNLGG----VLADTLGDLESVINIDLSNNHIGGSIPSNLP---------------VTVRNFSLSGNQL 129 (720)
Q Consensus 69 ~~~~l~~l~L~~n~l~~----~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~---------------~~L~~L~Ls~N~l 129 (720)
.+++|+.|+|++|.+++ .++..+..+++|++|+|++|+|++..+..++ ++|+.|+|++|++
T Consensus 92 ~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l 171 (386)
T 2ca6_A 92 KCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRL 171 (386)
T ss_dssp TCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCC
T ss_pred hCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCC
Confidence 34566666666666665 3555666666666666666666533332222 3566666666666
Q ss_pred C-CCCc---chhhcccccccccccccccC--C---CCCchhcCCCCCceEeccCCccc----ccCCCCCCCCCCCceeec
Q 004994 130 T-GSIP---ESLSRLTQLLDLSLNNNHLN--G---GIPDAFHQFTGLINFDLSANNLT----GQLPPSTRNLSSLYSLHL 196 (720)
Q Consensus 130 ~-g~~p---~~l~~l~~L~~L~l~~N~l~--g---~~p~~~~~l~~L~~L~ls~N~l~----g~~p~~~~~l~~L~~L~l 196 (720)
+ +.+| ..+.++++|+.|+|++|+|+ | .+|..+..+++|+.|+|++|.|+ +.+|..+..+++|+.|+|
T Consensus 172 ~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L 251 (386)
T 2ca6_A 172 ENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGL 251 (386)
T ss_dssp TGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEEC
T ss_pred CcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEEC
Confidence 5 3444 34556666666666666665 2 23335666666666666666664 455666666666666666
Q ss_pred cccccccc----c-cccc---ccccceEEccCCcCcc----cCCccc
Q 004994 197 QNNKLSGT----L-NVLE---DLHLIDLNIENNLFSG----PIPEKL 231 (720)
Q Consensus 197 ~~N~l~~~----~-~~~~---~~~l~~l~l~~N~l~g----~~p~~~ 231 (720)
++|.|++. + ..+. ...|+.|+|++|.+++ .+|..+
T Consensus 252 ~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l 298 (386)
T 2ca6_A 252 NDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVI 298 (386)
T ss_dssp TTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHH
T ss_pred CCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHH
Confidence 66666543 1 2221 2336666666666665 355544
No 370
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.61 E-value=1.5e-15 Score=172.74 Aligned_cols=138 Identities=30% Similarity=0.435 Sum_probs=93.5
Q ss_pred eecCceeEEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCCCccccCcEEEecCCcCCCCCcchhhccccccccc
Q 004994 68 CVFSNVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSNLPVTVRNFSLSGNQLTGSIPESLSRLTQLLDLS 147 (720)
Q Consensus 68 c~~~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ 147 (720)
|...+++.|++++|+|+ .+|..+. ++|+.|+|++|+|+ .+|. ...+|+.|+|++|+|+ .+|. .+++|++|+
T Consensus 37 c~~~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~-~l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~ 107 (622)
T 3g06_A 37 CLNNGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA-LPPELRTLEVSGNQLT-SLPV---LPPGLLELS 107 (622)
T ss_dssp HHHHCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC-CCTTCCEEEECSCCCS-CCCC---CCTTCCEEE
T ss_pred ccCCCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC-cCCCCCEEEcCCCcCC-cCCC---CCCCCCEEE
Confidence 33456888888888888 5666665 78888888888888 6776 4467888888888887 5665 567788888
Q ss_pred ccccccCCCCCchhcCCCCCceEeccCCcccccCCCCCCCCCCCceeeccccccccccccccccccceEEccCCcCc
Q 004994 148 LNNNHLNGGIPDAFHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNNKLSGTLNVLEDLHLIDLNIENNLFS 224 (720)
Q Consensus 148 l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~l~l~~N~l~ 224 (720)
|++|+|++ +|. .+++|+.|+|++|+|+ .+|.. +++|+.|+|++|+|++.+..+ ..|+.|++++|+|+
T Consensus 108 Ls~N~l~~-l~~---~l~~L~~L~L~~N~l~-~lp~~---l~~L~~L~Ls~N~l~~l~~~~--~~L~~L~L~~N~l~ 174 (622)
T 3g06_A 108 IFSNPLTH-LPA---LPSGLCKLWIFGNQLT-SLPVL---PPGLQELSVSDNQLASLPALP--SELCKLWAYNNQLT 174 (622)
T ss_dssp ECSCCCCC-CCC---CCTTCCEEECCSSCCS-CCCCC---CTTCCEEECCSSCCSCCCCCC--TTCCEEECCSSCCS
T ss_pred CcCCcCCC-CCC---CCCCcCEEECCCCCCC-cCCCC---CCCCCEEECcCCcCCCcCCcc--CCCCEEECCCCCCC
Confidence 88888874 454 4567777777777777 45553 366777777777776644321 12444444444444
No 371
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.60 E-value=5.5e-15 Score=168.07 Aligned_cols=162 Identities=23% Similarity=0.347 Sum_probs=90.5
Q ss_pred ecCceeEEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCCCccccCcEEEecCCcCCCCCcchhhcccccccccc
Q 004994 69 VFSNVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSNLPVTVRNFSLSGNQLTGSIPESLSRLTQLLDLSL 148 (720)
Q Consensus 69 ~~~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~l 148 (720)
.+++|+.|+|++|+|++ +|. .+++|++|+|++|+|+ .+|. ...+|+.|+|++|+|+ .+|.. +++|++|+|
T Consensus 79 ~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~-~l~~-~l~~L~~L~L~~N~l~-~lp~~---l~~L~~L~L 148 (622)
T 3g06_A 79 LPPELRTLEVSGNQLTS-LPV---LPPGLLELSIFSNPLT-HLPA-LPSGLCKLWIFGNQLT-SLPVL---PPGLQELSV 148 (622)
T ss_dssp CCTTCCEEEECSCCCSC-CCC---CCTTCCEEEECSCCCC-CCCC-CCTTCCEEECCSSCCS-CCCCC---CTTCCEEEC
T ss_pred cCCCCCEEEcCCCcCCc-CCC---CCCCCCEEECcCCcCC-CCCC-CCCCcCEEECCCCCCC-cCCCC---CCCCCEEEC
Confidence 45678888888888874 444 5677777777777776 3554 3345555555555555 24432 244555555
Q ss_pred cccccCCCCCchh---cC--------------CCCCceEeccCCcccccCCCCCCC-----------------CCCCcee
Q 004994 149 NNNHLNGGIPDAF---HQ--------------FTGLINFDLSANNLTGQLPPSTRN-----------------LSSLYSL 194 (720)
Q Consensus 149 ~~N~l~g~~p~~~---~~--------------l~~L~~L~ls~N~l~g~~p~~~~~-----------------l~~L~~L 194 (720)
++|+|++ +|..+ .. +++|+.|+|++|+|++ +|..+.+ +++|+.|
T Consensus 149 s~N~l~~-l~~~~~~L~~L~L~~N~l~~l~~~~~~L~~L~Ls~N~l~~-l~~~~~~L~~L~L~~N~l~~l~~~~~~L~~L 226 (622)
T 3g06_A 149 SDNQLAS-LPALPSELCKLWAYNNQLTSLPMLPSGLQELSVSDNQLAS-LPTLPSELYKLWAYNNRLTSLPALPSGLKEL 226 (622)
T ss_dssp CSSCCSC-CCCCCTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSC-CCCCCTTCCEEECCSSCCSSCCCCCTTCCEE
T ss_pred cCCcCCC-cCCccCCCCEEECCCCCCCCCcccCCCCcEEECCCCCCCC-CCCccchhhEEECcCCcccccCCCCCCCCEE
Confidence 5555543 22211 11 1555666666666653 3332211 2566777
Q ss_pred eccccccccccccccccccceEEccCCcCcccCCcccCCCccccccCccCC
Q 004994 195 HLQNNKLSGTLNVLEDLHLIDLNIENNLFSGPIPEKLLSIPNFRKDGNPFN 245 (720)
Q Consensus 195 ~l~~N~l~~~~~~~~~~~l~~l~l~~N~l~g~~p~~~~~l~~l~~~~n~~~ 245 (720)
+|++|+|++.+.. ...|+.|+|++|+|+ .+|..+.+|..|.+.+|.+.
T Consensus 227 ~Ls~N~L~~lp~~--l~~L~~L~Ls~N~L~-~lp~~~~~L~~L~Ls~N~L~ 274 (622)
T 3g06_A 227 IVSGNRLTSLPVL--PSELKELMVSGNRLT-SLPMLPSGLLSLSVYRNQLT 274 (622)
T ss_dssp ECCSSCCSCCCCC--CTTCCEEECCSSCCS-CCCCCCTTCCEEECCSSCCC
T ss_pred EccCCccCcCCCC--CCcCcEEECCCCCCC-cCCcccccCcEEeCCCCCCC
Confidence 7777777664411 123677777777777 45655555555555555443
No 372
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.60 E-value=2.5e-15 Score=142.22 Aligned_cols=108 Identities=31% Similarity=0.410 Sum_probs=93.5
Q ss_pred cEEeccCCcccccCCCCccccCcEEEecCCcCCCCCcchhhcccccccccccccccCCCCCchhcCCCCCceEeccCCcc
Q 004994 98 INIDLSNNHIGGSIPSNLPVTVRNFSLSGNQLTGSIPESLSRLTQLLDLSLNNNHLNGGIPDAFHQFTGLINFDLSANNL 177 (720)
Q Consensus 98 ~~L~L~~N~l~g~ip~~~~~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l 177 (720)
+.|++++|+|+ .+|..++.+|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..|..|.++++|+.|+|++|+|
T Consensus 12 ~~l~~s~n~l~-~ip~~~~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l 90 (170)
T 3g39_A 12 TTVDCSGKSLA-SVPTGIPTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQL 90 (170)
T ss_dssp TEEECTTSCCS-SCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred CEEEeCCCCcC-ccCccCCCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCcc
Confidence 56777777777 67777778888999999999988888899999999999999999977777789999999999999999
Q ss_pred cccCCCCCCCCCCCceeeccccccccccc
Q 004994 178 TGQLPPSTRNLSSLYSLHLQNNKLSGTLN 206 (720)
Q Consensus 178 ~g~~p~~~~~l~~L~~L~l~~N~l~~~~~ 206 (720)
++..+..|.++++|+.|+|++|.++...+
T Consensus 91 ~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 91 KSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred CEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 96666679999999999999999987654
No 373
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.59 E-value=7.5e-16 Score=142.42 Aligned_cols=124 Identities=23% Similarity=0.281 Sum_probs=95.1
Q ss_pred CCCccEEeccCCccc-ccCCCCcc--ccCcEEEecCCcCCCCCcchhhcccccccccccccccCCCCCchhcCCCCCceE
Q 004994 94 LESVINIDLSNNHIG-GSIPSNLP--VTVRNFSLSGNQLTGSIPESLSRLTQLLDLSLNNNHLNGGIPDAFHQFTGLINF 170 (720)
Q Consensus 94 l~~L~~L~L~~N~l~-g~ip~~~~--~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L 170 (720)
.++|+.|+|++|+++ +.+|..+. .+|+.|+|++|++++. ..++++++|+.|+|++|++++.+|..+..+++|+.|
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 467888888888887 77887665 6788888888888855 678888888888888888887778777778888888
Q ss_pred eccCCccccc-CCCCCCCCCCCceeeccccccccccc----cccccc-cceEEcc
Q 004994 171 DLSANNLTGQ-LPPSTRNLSSLYSLHLQNNKLSGTLN----VLEDLH-LIDLNIE 219 (720)
Q Consensus 171 ~ls~N~l~g~-~p~~~~~l~~L~~L~l~~N~l~~~~~----~~~~~~-l~~l~l~ 219 (720)
++++|++++. .+..+..+++|+.|++++|.+++.++ .+..+. |+.|+++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 8888888752 34678888888888888888877665 344443 6777665
No 374
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.58 E-value=7.5e-17 Score=170.59 Aligned_cols=174 Identities=18% Similarity=0.257 Sum_probs=139.5
Q ss_pred CceeEEEecCCcccccCCcCcCCCCCccEEeccCCccccc-CCCCcc--ccCcEEEecCCcCCCCCcchhhccccccccc
Q 004994 71 SNVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGS-IPSNLP--VTVRNFSLSGNQLTGSIPESLSRLTQLLDLS 147 (720)
Q Consensus 71 ~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~-ip~~~~--~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ 147 (720)
.+++.|++++|.+.+..+. +..+++|++|+|++|++++. +|..+. ++|+.|+|++|++++..|..++++++|++|+
T Consensus 70 ~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~ 148 (336)
T 2ast_B 70 QGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLN 148 (336)
T ss_dssp TTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEE
T ss_pred ccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEE
Confidence 7889999999999887665 56789999999999998865 665554 6899999999999988888899999999999
Q ss_pred cccc-ccCC-CCCchhcCCCCCceEeccCC-ccccc-CCCCCCCCC-CCceeecccc--ccc-c-cccccccc-ccceEE
Q 004994 148 LNNN-HLNG-GIPDAFHQFTGLINFDLSAN-NLTGQ-LPPSTRNLS-SLYSLHLQNN--KLS-G-TLNVLEDL-HLIDLN 217 (720)
Q Consensus 148 l~~N-~l~g-~~p~~~~~l~~L~~L~ls~N-~l~g~-~p~~~~~l~-~L~~L~l~~N--~l~-~-~~~~~~~~-~l~~l~ 217 (720)
|++| .+++ .+|..+.++++|++|+|++| .+++. ++..+..++ +|+.|+|++| .++ + .+..+..+ .|+.|+
T Consensus 149 L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~ 228 (336)
T 2ast_B 149 LSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLD 228 (336)
T ss_dssp CTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEE
T ss_pred CCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEe
Confidence 9999 6775 36777888999999999999 88864 677788889 9999999999 454 2 23344444 499999
Q ss_pred ccCCc-CcccCCcccCCCccccccCccCC
Q 004994 218 IENNL-FSGPIPEKLLSIPNFRKDGNPFN 245 (720)
Q Consensus 218 l~~N~-l~g~~p~~~~~l~~l~~~~n~~~ 245 (720)
+++|. +++..+..+..+++|+..+...|
T Consensus 229 l~~~~~l~~~~~~~l~~l~~L~~L~l~~~ 257 (336)
T 2ast_B 229 LSDSVMLKNDCFQEFFQLNYLQHLSLSRC 257 (336)
T ss_dssp CTTCTTCCGGGGGGGGGCTTCCEEECTTC
T ss_pred CCCCCcCCHHHHHHHhCCCCCCEeeCCCC
Confidence 99998 77777777777777776655544
No 375
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.58 E-value=5.2e-15 Score=140.57 Aligned_cols=108 Identities=27% Similarity=0.359 Sum_probs=92.3
Q ss_pred cEEeccCCcccccCCCCccccCcEEEecCCcCCCCCcchhhcccccccccccccccCCCCCchhcCCCCCceEeccCCcc
Q 004994 98 INIDLSNNHIGGSIPSNLPVTVRNFSLSGNQLTGSIPESLSRLTQLLDLSLNNNHLNGGIPDAFHQFTGLINFDLSANNL 177 (720)
Q Consensus 98 ~~L~L~~N~l~g~ip~~~~~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l 177 (720)
+.+++++|+|+ .+|..++.+|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..+..|.++++|+.|+|++|+|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~l 93 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIPTDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHL 93 (174)
T ss_dssp SEEECCSSCCS-SCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred cEEEeCCCCCC-ccCCCcCCCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCcc
Confidence 46777777775 77877778888999999999988888999999999999999999976666689999999999999999
Q ss_pred cccCCCCCCCCCCCceeeccccccccccc
Q 004994 178 TGQLPPSTRNLSSLYSLHLQNNKLSGTLN 206 (720)
Q Consensus 178 ~g~~p~~~~~l~~L~~L~l~~N~l~~~~~ 206 (720)
++..+..|..+++|+.|+|++|.|.....
T Consensus 94 ~~l~~~~~~~l~~L~~L~L~~N~~~c~~~ 122 (174)
T 2r9u_A 94 KSIPRGAFDNLKSLTHIYLYNNPWDCECR 122 (174)
T ss_dssp CCCCTTTTTTCTTCSEEECCSSCBCTTBG
T ss_pred ceeCHHHhccccCCCEEEeCCCCcccccc
Confidence 95555569999999999999999987654
No 376
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.58 E-value=9.7e-17 Score=173.33 Aligned_cols=170 Identities=24% Similarity=0.323 Sum_probs=87.6
Q ss_pred cCceeEEEecCCccccc----CCcCcCCCCCccEEeccCC---cccccCCCCc-------c--ccCcEEEecCCcCCC--
Q 004994 70 FSNVTEIRLTGMNLGGV----LADTLGDLESVINIDLSNN---HIGGSIPSNL-------P--VTVRNFSLSGNQLTG-- 131 (720)
Q Consensus 70 ~~~l~~l~L~~n~l~~~----~~~~~~~l~~L~~L~L~~N---~l~g~ip~~~-------~--~~L~~L~Ls~N~l~g-- 131 (720)
+++|+.|+|++|++++. ++..|..+++|++|+|++| ++++.+|..+ . .+|+.|+|++|+|++
T Consensus 31 ~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~ 110 (386)
T 2ca6_A 31 DDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTA 110 (386)
T ss_dssp CSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTT
T ss_pred CCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHH
Confidence 34566666666666544 2233555666666666653 3444444433 1 456666666666654
Q ss_pred --CCcchhhcccccccccccccccCCCCCchh----cCC---------CCCceEeccCCccc-ccCC---CCCCCCCCCc
Q 004994 132 --SIPESLSRLTQLLDLSLNNNHLNGGIPDAF----HQF---------TGLINFDLSANNLT-GQLP---PSTRNLSSLY 192 (720)
Q Consensus 132 --~~p~~l~~l~~L~~L~l~~N~l~g~~p~~~----~~l---------~~L~~L~ls~N~l~-g~~p---~~~~~l~~L~ 192 (720)
.+|..+.++++|+.|+|++|.|++..+..+ ..+ ++|++|+|++|+|+ +.+| ..+..+++|+
T Consensus 111 ~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~ 190 (386)
T 2ca6_A 111 QEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLH 190 (386)
T ss_dssp HHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCC
T ss_pred HHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcC
Confidence 355555666666666666666543222222 222 56666666666664 2333 2444555666
Q ss_pred eeeccccccc--c---ccc-ccccc-ccceEEccCCcCc----ccCCcccCCCccccc
Q 004994 193 SLHLQNNKLS--G---TLN-VLEDL-HLIDLNIENNLFS----GPIPEKLLSIPNFRK 239 (720)
Q Consensus 193 ~L~l~~N~l~--~---~~~-~~~~~-~l~~l~l~~N~l~----g~~p~~~~~l~~l~~ 239 (720)
.|+|++|+|+ | ..+ .+..+ .|+.|+|++|.|+ +.+|..+..+++|+.
T Consensus 191 ~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~ 248 (386)
T 2ca6_A 191 TVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRE 248 (386)
T ss_dssp EEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCE
T ss_pred EEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCE
Confidence 6666666655 2 122 33333 2566666666664 445554444444443
No 377
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.55 E-value=4.1e-15 Score=141.68 Aligned_cols=130 Identities=21% Similarity=0.243 Sum_probs=88.0
Q ss_pred eecCceeEEEecCCcccccCCcCcCCCC-CccEEeccCCcccccCCCCcc--ccCcEEEecCCcCCCCCcchhhcccccc
Q 004994 68 CVFSNVTEIRLTGMNLGGVLADTLGDLE-SVINIDLSNNHIGGSIPSNLP--VTVRNFSLSGNQLTGSIPESLSRLTQLL 144 (720)
Q Consensus 68 c~~~~l~~l~L~~n~l~~~~~~~~~~l~-~L~~L~L~~N~l~g~ip~~~~--~~L~~L~Ls~N~l~g~~p~~l~~l~~L~ 144 (720)
....+|+.|+|++|+++. +|. +..+. +|++|+|++|+|++. ..+. .+|+.|+|++|+|++..|..+..+++|+
T Consensus 16 ~~~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 91 (176)
T 1a9n_A 16 TNAVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLT 91 (176)
T ss_dssp ECTTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCC
T ss_pred CCcCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCC
Confidence 344577778888887774 343 44444 777888887777743 3443 5777777777777754444457777777
Q ss_pred cccccccccCCCCCc--hhcCCCCCceEeccCCcccccCCCC----CCCCCCCceeecccccccc
Q 004994 145 DLSLNNNHLNGGIPD--AFHQFTGLINFDLSANNLTGQLPPS----TRNLSSLYSLHLQNNKLSG 203 (720)
Q Consensus 145 ~L~l~~N~l~g~~p~--~~~~l~~L~~L~ls~N~l~g~~p~~----~~~l~~L~~L~l~~N~l~~ 203 (720)
.|+|++|+|+ .+|. .+..+++|+.|+|++|.++ .+|.. +..+++|+.||+++|.+..
T Consensus 92 ~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~~ 154 (176)
T 1a9n_A 92 ELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLKE 154 (176)
T ss_dssp EEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHHH
T ss_pred EEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHHH
Confidence 7777777775 4555 6777777777777777776 55653 6677777777777776653
No 378
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.55 E-value=2.7e-16 Score=166.25 Aligned_cols=175 Identities=19% Similarity=0.223 Sum_probs=139.5
Q ss_pred ecCceeEEEecCCccccc-CCcCcCCCCCccEEeccCCcccccCCCCcc--ccCcEEEecCC-cCCCC-Ccchhhccccc
Q 004994 69 VFSNVTEIRLTGMNLGGV-LADTLGDLESVINIDLSNNHIGGSIPSNLP--VTVRNFSLSGN-QLTGS-IPESLSRLTQL 143 (720)
Q Consensus 69 ~~~~l~~l~L~~n~l~~~-~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~--~~L~~L~Ls~N-~l~g~-~p~~l~~l~~L 143 (720)
.+++|+.|+|++|.+++. ++..+..+++|++|+|++|++++.+|..+. ++|+.|+|++| .+++. +|..+.++++|
T Consensus 91 ~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L 170 (336)
T 2ast_B 91 SPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRL 170 (336)
T ss_dssp CCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTC
T ss_pred cCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCC
Confidence 468899999999999876 888899999999999999999987777665 78999999999 78863 77778999999
Q ss_pred cccccccc-ccCCC-CCchhcCCC-CCceEeccCC--ccc-ccCCCCCCCCCCCceeeccccc-cccc-cccccccc-cc
Q 004994 144 LDLSLNNN-HLNGG-IPDAFHQFT-GLINFDLSAN--NLT-GQLPPSTRNLSSLYSLHLQNNK-LSGT-LNVLEDLH-LI 214 (720)
Q Consensus 144 ~~L~l~~N-~l~g~-~p~~~~~l~-~L~~L~ls~N--~l~-g~~p~~~~~l~~L~~L~l~~N~-l~~~-~~~~~~~~-l~ 214 (720)
+.|+|++| .+++. ++..+..++ +|+.|+|++| .++ +.+|..+.++++|+.|+|++|. +++. +..+..+. |+
T Consensus 171 ~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~ 250 (336)
T 2ast_B 171 DELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQ 250 (336)
T ss_dssp CEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCC
T ss_pred CEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCC
Confidence 99999999 99864 677789999 9999999999 555 4677778889999999999999 6643 44555554 99
Q ss_pred eEEccCCc-CcccCCcccCCCccccccCcc
Q 004994 215 DLNIENNL-FSGPIPEKLLSIPNFRKDGNP 243 (720)
Q Consensus 215 ~l~l~~N~-l~g~~p~~~~~l~~l~~~~n~ 243 (720)
.|++++|. +.......+.++++|+..+..
T Consensus 251 ~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~ 280 (336)
T 2ast_B 251 HLSLSRCYDIIPETLLELGEIPTLKTLQVF 280 (336)
T ss_dssp EEECTTCTTCCGGGGGGGGGCTTCCEEECT
T ss_pred EeeCCCCCCCCHHHHHHHhcCCCCCEEecc
Confidence 99999995 322211245556666554444
No 379
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.54 E-value=1.5e-14 Score=153.84 Aligned_cols=180 Identities=16% Similarity=0.166 Sum_probs=145.5
Q ss_pred CceeEeecCceeEEEecCCcccccCC-cCcCCCCCccE-EeccCCcccccCCCCcc--ccCcEEEecCCcCCCCCcchhh
Q 004994 63 WQGVFCVFSNVTEIRLTGMNLGGVLA-DTLGDLESVIN-IDLSNNHIGGSIPSNLP--VTVRNFSLSGNQLTGSIPESLS 138 (720)
Q Consensus 63 w~gv~c~~~~l~~l~L~~n~l~~~~~-~~~~~l~~L~~-L~L~~N~l~g~ip~~~~--~~L~~L~Ls~N~l~g~~p~~l~ 138 (720)
..++|..+++|+.|+|++|++.+.+| ..|.++++|+. ++++.|+|+...|..+. .+|+.|++++|++++..+..+.
T Consensus 46 ~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~ 125 (350)
T 4ay9_X 46 QKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKI 125 (350)
T ss_dssp CTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTC
T ss_pred CHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhccccccccccccccccCCchhhc
Confidence 56778889999999999999987766 57889998775 67778999966666665 7899999999999977777777
Q ss_pred cccccccccccc-cccCCCCCchhcCCC-CCceEeccCCcccccCCCCCCCCCCCceeeccc-cccccccc-cccccc-c
Q 004994 139 RLTQLLDLSLNN-NHLNGGIPDAFHQFT-GLINFDLSANNLTGQLPPSTRNLSSLYSLHLQN-NKLSGTLN-VLEDLH-L 213 (720)
Q Consensus 139 ~l~~L~~L~l~~-N~l~g~~p~~~~~l~-~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~-N~l~~~~~-~~~~~~-l 213 (720)
...++..|++.+ |++....+..|..+. .++.|+|++|+|+ .+|.......+|+.|++++ |.++..++ .+..+. |
T Consensus 126 ~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~-~i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L 204 (350)
T 4ay9_X 126 HSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQ-EIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGP 204 (350)
T ss_dssp CBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCC-EECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECC
T ss_pred ccchhhhhhhccccccccccccchhhcchhhhhhcccccccc-CCChhhccccchhHHhhccCCcccCCCHHHhccCccc
Confidence 888899999965 677755556677764 6899999999998 6777777788999999985 66776664 355554 9
Q ss_pred ceEEccCCcCcccCCcccCCCccccccCcc
Q 004994 214 IDLNIENNLFSGPIPEKLLSIPNFRKDGNP 243 (720)
Q Consensus 214 ~~l~l~~N~l~g~~p~~~~~l~~l~~~~n~ 243 (720)
+.|+|++|+|+...+..+.+++.|+..++.
T Consensus 205 ~~LdLs~N~l~~lp~~~~~~L~~L~~l~~~ 234 (350)
T 4ay9_X 205 VILDISRTRIHSLPSYGLENLKKLRARSTY 234 (350)
T ss_dssp SEEECTTSCCCCCCSSSCTTCCEEECTTCT
T ss_pred chhhcCCCCcCccChhhhccchHhhhccCC
Confidence 999999999995445568889888887764
No 380
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.54 E-value=4.7e-17 Score=158.41 Aligned_cols=130 Identities=23% Similarity=0.295 Sum_probs=92.3
Q ss_pred cCceeEEEecCCcccccCCc------CcCCCCCccEEeccCCcccccCCCCcc--ccCcEEEecCCcCCCCCcchhhccc
Q 004994 70 FSNVTEIRLTGMNLGGVLAD------TLGDLESVINIDLSNNHIGGSIPSNLP--VTVRNFSLSGNQLTGSIPESLSRLT 141 (720)
Q Consensus 70 ~~~l~~l~L~~n~l~~~~~~------~~~~l~~L~~L~L~~N~l~g~ip~~~~--~~L~~L~Ls~N~l~g~~p~~l~~l~ 141 (720)
..+++.++|+.+.+.|.+|. .+..+++|++|+|++|+|++ +| .+. .+|+.|+|++|+++ .+|..+..++
T Consensus 17 ~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~ 93 (198)
T 1ds9_A 17 RKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVAD 93 (198)
T ss_dssp TTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHH
T ss_pred cccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCC
Confidence 34556666666777766665 77778888888888888874 66 554 67777777777777 6677777777
Q ss_pred ccccccccccccCCCCCchhcCCCCCceEeccCCcccccCC--CCCCCCCCCceeecccccccccc
Q 004994 142 QLLDLSLNNNHLNGGIPDAFHQFTGLINFDLSANNLTGQLP--PSTRNLSSLYSLHLQNNKLSGTL 205 (720)
Q Consensus 142 ~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p--~~~~~l~~L~~L~l~~N~l~~~~ 205 (720)
+|+.|+|++|+|++ +| .+..+++|+.|+|++|++++ +| ..+..+++|+.|++++|.+++.+
T Consensus 94 ~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~-~~~~~~l~~l~~L~~L~l~~N~l~~~~ 156 (198)
T 1ds9_A 94 TLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITN-WGEIDKLAALDKLEDLLLAGNPLYNDY 156 (198)
T ss_dssp HCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCC-HHHHHHHTTTTTCSEEEECSCHHHHHH
T ss_pred cCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCc-hhHHHHHhcCCCCCEEEecCCcccccc
Confidence 77777777777774 44 57777777777777777763 33 35667777777777777776654
No 381
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.53 E-value=4.7e-15 Score=141.29 Aligned_cols=132 Identities=17% Similarity=0.165 Sum_probs=109.9
Q ss_pred cCcCCCCCccEEeccCCcccccCCCCcc--ccCcEEEecCCcCCCCCcchhhcccccccccccccccCCCCCchhcCCCC
Q 004994 89 DTLGDLESVINIDLSNNHIGGSIPSNLP--VTVRNFSLSGNQLTGSIPESLSRLTQLLDLSLNNNHLNGGIPDAFHQFTG 166 (720)
Q Consensus 89 ~~~~~l~~L~~L~L~~N~l~g~ip~~~~--~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~l~~N~l~g~~p~~~~~l~~ 166 (720)
+.+.++.+|+.|+|++|+++ .+|.... ++|+.|+|++|+|++. ..|.++++|+.|+|++|+|++..|..|..+++
T Consensus 13 ~~~~~~~~L~~L~l~~n~l~-~i~~~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 89 (176)
T 1a9n_A 13 AQYTNAVRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPD 89 (176)
T ss_dssp CEEECTTSCEEEECTTSCCC-SCCCGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTT
T ss_pred HhcCCcCCceEEEeeCCCCc-hhHHhhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCC
Confidence 45677899999999999999 5665332 4899999999999965 67999999999999999999655566699999
Q ss_pred CceEeccCCcccccCCC--CCCCCCCCceeecccccccccccc----ccccc-cceEEccCCcCc
Q 004994 167 LINFDLSANNLTGQLPP--STRNLSSLYSLHLQNNKLSGTLNV----LEDLH-LIDLNIENNLFS 224 (720)
Q Consensus 167 L~~L~ls~N~l~g~~p~--~~~~l~~L~~L~l~~N~l~~~~~~----~~~~~-l~~l~l~~N~l~ 224 (720)
|+.|+|++|+|+ .+|. .+..+++|+.|+|++|.++..+.. +..+. |+.||+++|.+.
T Consensus 90 L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 90 LTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred CCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCCcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 999999999996 6776 788999999999999999876653 45444 889999888775
No 382
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.51 E-value=9.4e-16 Score=164.05 Aligned_cols=155 Identities=23% Similarity=0.325 Sum_probs=87.2
Q ss_pred ceeEEEecCCcccccCCcCcCCC-----CCccEEeccCCcccccCCCCcc-------ccCcEEEecCCcCCCCCcchhhc
Q 004994 72 NVTEIRLTGMNLGGVLADTLGDL-----ESVINIDLSNNHIGGSIPSNLP-------VTVRNFSLSGNQLTGSIPESLSR 139 (720)
Q Consensus 72 ~l~~l~L~~n~l~~~~~~~~~~l-----~~L~~L~L~~N~l~g~ip~~~~-------~~L~~L~Ls~N~l~g~~p~~l~~ 139 (720)
+|+.|+|++|++++..+..+..+ ++|++|+|++|+|++..+..+. .+|+.|+|++|+|++..+..+..
T Consensus 52 ~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~ 131 (362)
T 3goz_A 52 SVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQ 131 (362)
T ss_dssp TCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHH
T ss_pred ceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHH
Confidence 56666666666666555555443 6666666666666654443221 35666666666666555544433
Q ss_pred -----ccccccccccccccCCCC----CchhcCCC-CCceEeccCCcccccCCCCC----CCC-CCCceeeccccccccc
Q 004994 140 -----LTQLLDLSLNNNHLNGGI----PDAFHQFT-GLINFDLSANNLTGQLPPST----RNL-SSLYSLHLQNNKLSGT 204 (720)
Q Consensus 140 -----l~~L~~L~l~~N~l~g~~----p~~~~~l~-~L~~L~ls~N~l~g~~p~~~----~~l-~~L~~L~l~~N~l~~~ 204 (720)
.++|++|+|++|.|++.- +..+..++ +|++|+|++|+|++..+..+ ..+ ++|+.|+|++|.|+..
T Consensus 132 ~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~ 211 (362)
T 3goz_A 132 AFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLK 211 (362)
T ss_dssp HHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGS
T ss_pred HHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChh
Confidence 246666666666666432 23334443 66666666666665444322 233 4666677777666652
Q ss_pred -----cccccc--cccceEEccCCcCccc
Q 004994 205 -----LNVLED--LHLIDLNIENNLFSGP 226 (720)
Q Consensus 205 -----~~~~~~--~~l~~l~l~~N~l~g~ 226 (720)
...+.. ..|+.|+|++|.+++.
T Consensus 212 ~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~ 240 (362)
T 3goz_A 212 SYAELAYIFSSIPNHVVSLNLCLNCLHGP 240 (362)
T ss_dssp CHHHHHHHHHHSCTTCCEEECCSSCCCCC
T ss_pred HHHHHHHHHhcCCCCceEEECcCCCCCcH
Confidence 222322 2466677777766653
No 383
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.49 E-value=2.2e-15 Score=161.10 Aligned_cols=156 Identities=24% Similarity=0.305 Sum_probs=104.3
Q ss_pred cCceeEEEecCCcccccCC----cCcCCCC-CccEEeccCCcccccCCCCcc-------ccCcEEEecCCcCCCCCcchh
Q 004994 70 FSNVTEIRLTGMNLGGVLA----DTLGDLE-SVINIDLSNNHIGGSIPSNLP-------VTVRNFSLSGNQLTGSIPESL 137 (720)
Q Consensus 70 ~~~l~~l~L~~n~l~~~~~----~~~~~l~-~L~~L~L~~N~l~g~ip~~~~-------~~L~~L~Ls~N~l~g~~p~~l 137 (720)
..+|+.|+|++|++++..+ ..|..++ +|++|+|++|+|++..+..+. .+|++|+|++|++++..+..+
T Consensus 21 ~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l 100 (362)
T 3goz_A 21 PHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDEL 100 (362)
T ss_dssp CTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHH
T ss_pred CCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHH
Confidence 3457788888888776655 6667777 788888888887765554442 467888888888877666655
Q ss_pred hcc-----cccccccccccccCCCCCchhcC-----CCCCceEeccCCccccc----CCCCCCCCC-CCceeeccccccc
Q 004994 138 SRL-----TQLLDLSLNNNHLNGGIPDAFHQ-----FTGLINFDLSANNLTGQ----LPPSTRNLS-SLYSLHLQNNKLS 202 (720)
Q Consensus 138 ~~l-----~~L~~L~l~~N~l~g~~p~~~~~-----l~~L~~L~ls~N~l~g~----~p~~~~~l~-~L~~L~l~~N~l~ 202 (720)
... ++|+.|+|++|+|++..+..+.. .++|++|+|++|.|+.. ++..+..++ +|+.|+|++|+|+
T Consensus 101 ~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~ 180 (362)
T 3goz_A 101 VKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLA 180 (362)
T ss_dssp HHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGG
T ss_pred HHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCc
Confidence 443 67888888888887655544433 35788888888887742 233334444 7888888888777
Q ss_pred cccc-----cccc--cccceEEccCCcCcc
Q 004994 203 GTLN-----VLED--LHLIDLNIENNLFSG 225 (720)
Q Consensus 203 ~~~~-----~~~~--~~l~~l~l~~N~l~g 225 (720)
+... .+.. ..|+.|+|++|.|++
T Consensus 181 ~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~ 210 (362)
T 3goz_A 181 SKNCAELAKFLASIPASVTSLDLSANLLGL 210 (362)
T ss_dssp GSCHHHHHHHHHTSCTTCCEEECTTSCGGG
T ss_pred hhhHHHHHHHHHhCCCCCCEEECCCCCCCh
Confidence 6542 2222 257788888888775
No 384
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.49 E-value=4.5e-14 Score=159.36 Aligned_cols=118 Identities=23% Similarity=0.279 Sum_probs=97.9
Q ss_pred CccEEeccCCcccccCCCCcc--ccCcEEEecCCcCCCCCcchhhcccccccccccccccCCCCCchhcCCCCCceEecc
Q 004994 96 SVINIDLSNNHIGGSIPSNLP--VTVRNFSLSGNQLTGSIPESLSRLTQLLDLSLNNNHLNGGIPDAFHQFTGLINFDLS 173 (720)
Q Consensus 96 ~L~~L~L~~N~l~g~ip~~~~--~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls 173 (720)
.|+.|+|++|+|++ +|. +. .+|+.|+|++|+|+ .+|..|+++++|+.|+|++|+|++ +| .|+++++|+.|+|+
T Consensus 442 ~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls 516 (567)
T 1dce_A 442 DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLC 516 (567)
T ss_dssp TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECC
T ss_pred CceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECC
Confidence 48889999999984 776 65 68999999999998 888899999999999999999986 67 78999999999999
Q ss_pred CCcccccC-CCCCCCCCCCceeeccccccccccccccc----c-ccceEEc
Q 004994 174 ANNLTGQL-PPSTRNLSSLYSLHLQNNKLSGTLNVLED----L-HLIDLNI 218 (720)
Q Consensus 174 ~N~l~g~~-p~~~~~l~~L~~L~l~~N~l~~~~~~~~~----~-~l~~l~l 218 (720)
+|+|++.. |..++.+++|+.|+|++|+|++.++.... + .|+.|++
T Consensus 517 ~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 517 NNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSILT 567 (567)
T ss_dssp SSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSEEEC
T ss_pred CCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCcccCccCC
Confidence 99998766 88899999999999999999888764322 2 3666653
No 385
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.47 E-value=2.4e-16 Score=153.44 Aligned_cols=145 Identities=27% Similarity=0.340 Sum_probs=124.1
Q ss_pred cCCCCCccEEeccCCcccccCCC------Ccc--ccCcEEEecCCcCCCCCcchhhcccccccccccccccCCCCCchhc
Q 004994 91 LGDLESVINIDLSNNHIGGSIPS------NLP--VTVRNFSLSGNQLTGSIPESLSRLTQLLDLSLNNNHLNGGIPDAFH 162 (720)
Q Consensus 91 ~~~l~~L~~L~L~~N~l~g~ip~------~~~--~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~l~~N~l~g~~p~~~~ 162 (720)
+.....++.++|+.|.|+|.+|. .+. .+|+.|+|++|++++ +| .+.++++|+.|+|++|+|+ .+|..+.
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~ 90 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDA 90 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhh
Confidence 45567889999999999999887 554 689999999999996 77 8999999999999999998 7898888
Q ss_pred CCCCCceEeccCCcccccCCCCCCCCCCCceeeccccccccccc--cccccc-cceEEccCCcCcccCCcc---------
Q 004994 163 QFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNNKLSGTLN--VLEDLH-LIDLNIENNLFSGPIPEK--------- 230 (720)
Q Consensus 163 ~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~--~~~~~~-l~~l~l~~N~l~g~~p~~--------- 230 (720)
.+++|+.|+|++|+|++ +| .+..+++|+.|+|++|++++... .+..+. |+.|++++|.+++.+|..
T Consensus 91 ~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~ 168 (198)
T 1ds9_A 91 VADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIE 168 (198)
T ss_dssp HHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHH
T ss_pred cCCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHH
Confidence 89999999999999995 66 68899999999999999997543 555554 999999999999887753
Q ss_pred -cCCCcccccc
Q 004994 231 -LLSIPNFRKD 240 (720)
Q Consensus 231 -~~~l~~l~~~ 240 (720)
+..+++|+..
T Consensus 169 ~~~~l~~L~~L 179 (198)
T 1ds9_A 169 VVKRLPNLKKL 179 (198)
T ss_dssp HHHHCSSCSEE
T ss_pred HHHhCCCcEEE
Confidence 6666776654
No 386
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.43 E-value=3.4e-13 Score=127.45 Aligned_cols=108 Identities=26% Similarity=0.343 Sum_probs=95.0
Q ss_pred cCcEEEecCCcCCCCCcchhhcccccccccccccccCCCCCchhcCCCCCceEeccCCcccccCCCCCCCCCCCceeecc
Q 004994 118 TVRNFSLSGNQLTGSIPESLSRLTQLLDLSLNNNHLNGGIPDAFHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQ 197 (720)
Q Consensus 118 ~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~ 197 (720)
..+.|++++|+|+ .+|..+. ++|+.|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|+.|+|+
T Consensus 10 ~~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~ 86 (170)
T 3g39_A 10 SGTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLN 86 (170)
T ss_dssp ETTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECC
Confidence 4688999999999 6887774 899999999999998889999999999999999999997666678999999999999
Q ss_pred cccccccccc-ccccc-cceEEccCCcCcccCC
Q 004994 198 NNKLSGTLNV-LEDLH-LIDLNIENNLFSGPIP 228 (720)
Q Consensus 198 ~N~l~~~~~~-~~~~~-l~~l~l~~N~l~g~~p 228 (720)
+|+|++.++. +..+. |+.|+|++|.++...+
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 87 DNQLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred CCccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 9999998864 66654 9999999999986543
No 387
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.42 E-value=6.3e-13 Score=126.11 Aligned_cols=106 Identities=25% Similarity=0.286 Sum_probs=92.6
Q ss_pred eEEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCCCcc--ccCcEEEecCCcCCCCCcchhhccccccccccccc
Q 004994 74 TEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSNLP--VTVRNFSLSGNQLTGSIPESLSRLTQLLDLSLNNN 151 (720)
Q Consensus 74 ~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~--~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~l~~N 151 (720)
+.+++++|+|+ .+|..+. ++|++|+|++|+|++..|..+. .+|+.|+|++|+|++..+..|.++++|+.|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 68999999997 5677664 8999999999999987787776 79999999999999766666899999999999999
Q ss_pred ccCCCCCchhcCCCCCceEeccCCcccccCCC
Q 004994 152 HLNGGIPDAFHQFTGLINFDLSANNLTGQLPP 183 (720)
Q Consensus 152 ~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~ 183 (720)
+|++..+..|..+++|+.|+|++|.+. ..+.
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~-c~~~ 122 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWD-CECR 122 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBC-TTBG
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcc-cccc
Confidence 999766667999999999999999998 4443
No 388
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.41 E-value=9.2e-15 Score=161.57 Aligned_cols=175 Identities=18% Similarity=0.177 Sum_probs=133.8
Q ss_pred cCceeEEEecCCccccc----CCcCcCCCCCccEEeccCCcccccCC----CCc---cccCcEEEecCCcCCCC----Cc
Q 004994 70 FSNVTEIRLTGMNLGGV----LADTLGDLESVINIDLSNNHIGGSIP----SNL---PVTVRNFSLSGNQLTGS----IP 134 (720)
Q Consensus 70 ~~~l~~l~L~~n~l~~~----~~~~~~~l~~L~~L~L~~N~l~g~ip----~~~---~~~L~~L~Ls~N~l~g~----~p 134 (720)
.++|+.|+|++|++++. ++..+..+++|+.|+|++|++++.-. ..+ ..+|+.|+|++|++++. ++
T Consensus 198 ~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~ 277 (461)
T 1z7x_W 198 PCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLC 277 (461)
T ss_dssp CCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHH
T ss_pred CCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHH
Confidence 45899999999999873 57778889999999999999875321 111 25899999999999864 67
Q ss_pred chhhcccccccccccccccCCCCCchhcC-----CCCCceEeccCCccccc----CCCCCCCCCCCceeecccccccccc
Q 004994 135 ESLSRLTQLLDLSLNNNHLNGGIPDAFHQ-----FTGLINFDLSANNLTGQ----LPPSTRNLSSLYSLHLQNNKLSGTL 205 (720)
Q Consensus 135 ~~l~~l~~L~~L~l~~N~l~g~~p~~~~~-----l~~L~~L~ls~N~l~g~----~p~~~~~l~~L~~L~l~~N~l~~~~ 205 (720)
..+.++++|+.|+|++|.+++..+..+.. .++|+.|+|++|.+++. ++..+..+++|+.|+|++|.+++..
T Consensus 278 ~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~ 357 (461)
T 1z7x_W 278 RVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAG 357 (461)
T ss_dssp HHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHH
T ss_pred HHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCcccccc
Confidence 78888999999999999987554444443 36899999999999864 5667778899999999999987653
Q ss_pred -ccc----c--ccccceEEccCCcCcc----cCCcccCCCcccc---ccCccC
Q 004994 206 -NVL----E--DLHLIDLNIENNLFSG----PIPEKLLSIPNFR---KDGNPF 244 (720)
Q Consensus 206 -~~~----~--~~~l~~l~l~~N~l~g----~~p~~~~~l~~l~---~~~n~~ 244 (720)
..+ . ...|+.|++++|.+++ .+|..+..+++|+ +.+|.+
T Consensus 358 ~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i 410 (461)
T 1z7x_W 358 VRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCL 410 (461)
T ss_dssp HHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSC
T ss_pred HHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCC
Confidence 222 2 3369999999999986 7787765555544 455544
No 389
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.39 E-value=8.1e-15 Score=162.03 Aligned_cols=174 Identities=21% Similarity=0.209 Sum_probs=133.5
Q ss_pred ceeEEEecCCcccc----cCCcCcCCCCCccEEeccCCcccccCCCCcc-------ccCcEEEecCCcCCCC----Ccch
Q 004994 72 NVTEIRLTGMNLGG----VLADTLGDLESVINIDLSNNHIGGSIPSNLP-------VTVRNFSLSGNQLTGS----IPES 136 (720)
Q Consensus 72 ~l~~l~L~~n~l~~----~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~-------~~L~~L~Ls~N~l~g~----~p~~ 136 (720)
+|+.|+|++|+++. .++..+..+++|++|+|++|++++..+..+. .+|+.|+|++|++++. ++..
T Consensus 86 ~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~ 165 (461)
T 1z7x_W 86 KIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASV 165 (461)
T ss_dssp CCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHH
T ss_pred ceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHH
Confidence 69999999999984 6788899999999999999999865444332 3699999999999874 4666
Q ss_pred hhcccccccccccccccCCCCCchhc-----CCCCCceEeccCCccccc----CCCCCCCCCCCceeecccccccccc--
Q 004994 137 LSRLTQLLDLSLNNNHLNGGIPDAFH-----QFTGLINFDLSANNLTGQ----LPPSTRNLSSLYSLHLQNNKLSGTL-- 205 (720)
Q Consensus 137 l~~l~~L~~L~l~~N~l~g~~p~~~~-----~l~~L~~L~ls~N~l~g~----~p~~~~~l~~L~~L~l~~N~l~~~~-- 205 (720)
+..+++|+.|+|++|.++...+..+. .+++|+.|+|++|.+++. ++..+..+++|+.|+|++|.++...
T Consensus 166 l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~ 245 (461)
T 1z7x_W 166 LRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMA 245 (461)
T ss_dssp HHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHH
T ss_pred HhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHH
Confidence 77889999999999998765444444 367999999999999863 5777888999999999999987642
Q ss_pred ---ccc-c-ccccceEEccCCcCccc----CCcccCCCccccccCccCC
Q 004994 206 ---NVL-E-DLHLIDLNIENNLFSGP----IPEKLLSIPNFRKDGNPFN 245 (720)
Q Consensus 206 ---~~~-~-~~~l~~l~l~~N~l~g~----~p~~~~~l~~l~~~~n~~~ 245 (720)
+.+ . ...|+.|++++|.++.. +|..+..+++|+..+...|
T Consensus 246 ~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n 294 (461)
T 1z7x_W 246 ELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGN 294 (461)
T ss_dssp HHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTC
T ss_pred HHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCC
Confidence 222 1 33599999999999864 6666555555554444433
No 390
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.31 E-value=2.2e-12 Score=136.88 Aligned_cols=101 Identities=29% Similarity=0.302 Sum_probs=70.9
Q ss_pred cCC-cccccCCcCcCCCCCccEEeccC-CcccccCCCCccccCcEEEecCCcCCCCCcchhhcccccccccccccccCCC
Q 004994 79 TGM-NLGGVLADTLGDLESVINIDLSN-NHIGGSIPSNLPVTVRNFSLSGNQLTGSIPESLSRLTQLLDLSLNNNHLNGG 156 (720)
Q Consensus 79 ~~n-~l~~~~~~~~~~l~~L~~L~L~~-N~l~g~ip~~~~~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~l~~N~l~g~ 156 (720)
+++ +|++ +|. |..+++|+.|+|++ |+|+ +..|..|.+|++|+.|+|++|+|++.
T Consensus 16 ~~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~----------------------~~~~~~~~~l~~L~~L~l~~N~l~~~ 71 (347)
T 2ifg_A 16 TRDGALDS-LHH-LPGAENLTELYIENQQHLQ----------------------HLELRDLRGLGELRNLTIVKSGLRFV 71 (347)
T ss_dssp CSSCCCTT-TTT-SCSCSCCSEEECCSCSSCC----------------------EECGGGSCSCCCCSEEECCSSCCCEE
T ss_pred CCCCCCCc-cCC-CCCCCCeeEEEccCCCCCC----------------------CcChhHhccccCCCEEECCCCcccee
Confidence 444 5664 555 66666666666664 5555 44556677888888888888888877
Q ss_pred CCchhcCCCCCceEeccCCcccccCCCCCCCCCCCceeeccccccccc
Q 004994 157 IPDAFHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNNKLSGT 204 (720)
Q Consensus 157 ~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~ 204 (720)
.|..|.+|++|+.|+|++|+|++..+..+..++ |+.|+|++|.|...
T Consensus 72 ~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c~ 118 (347)
T 2ifg_A 72 APDAFHFTPRLSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPLHCS 118 (347)
T ss_dssp CTTGGGSCSCCCEEECCSSCCSCCCSTTTCSCC-CCEEECCSSCCCCC
T ss_pred CHHHhcCCcCCCEEeCCCCccceeCHHHcccCC-ceEEEeeCCCccCC
Confidence 777888888888888888888854444444454 88888888887653
No 391
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.28 E-value=3.3e-12 Score=135.50 Aligned_cols=103 Identities=20% Similarity=0.213 Sum_probs=91.6
Q ss_pred EEEecCC-cCCCCCcchhhcccccccccccc-cccCCCCCchhcCCCCCceEeccCCcccccCCCCCCCCCCCceeeccc
Q 004994 121 NFSLSGN-QLTGSIPESLSRLTQLLDLSLNN-NHLNGGIPDAFHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQN 198 (720)
Q Consensus 121 ~L~Ls~N-~l~g~~p~~l~~l~~L~~L~l~~-N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~ 198 (720)
.+++++| +|+ .+|. |..+++|+.|+|++ |+|++..|..|.+|++|+.|+|++|+|++..|..|.+|++|+.|+|++
T Consensus 12 ~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 4577776 777 6788 99999999999996 999988888999999999999999999998888999999999999999
Q ss_pred ccccccccc-ccccccceEEccCCcCcc
Q 004994 199 NKLSGTLNV-LEDLHLIDLNIENNLFSG 225 (720)
Q Consensus 199 N~l~~~~~~-~~~~~l~~l~l~~N~l~g 225 (720)
|+|++.++. +..+.|+.|+|++|.|..
T Consensus 90 N~l~~~~~~~~~~~~L~~l~l~~N~~~c 117 (347)
T 2ifg_A 90 NALESLSWKTVQGLSLQELVLSGNPLHC 117 (347)
T ss_dssp SCCSCCCSTTTCSCCCCEEECCSSCCCC
T ss_pred CccceeCHHHcccCCceEEEeeCCCccC
Confidence 999998854 555669999999999974
No 392
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.21 E-value=4.3e-11 Score=121.47 Aligned_cols=145 Identities=12% Similarity=0.086 Sum_probs=110.8
Q ss_pred HHhcCCCCCCeeccCCCceEEEEEeCCCcEEEEEEecccccccccHHHHHHHHHHHHccC-CCceeEEEeEeccCCeEEE
Q 004994 437 QYTNSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLR-HGNIVELIGYCNEHGQHLL 515 (720)
Q Consensus 437 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~~~~~~~~~~~l 515 (720)
.....|.....++.|+.+.||++... ++.+++|+...... .....+.+|+++++.+. |..+.++++++.+.+..|+
T Consensus 11 ~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~--~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~l 87 (263)
T 3tm0_A 11 KLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYK--GTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNL 87 (263)
T ss_dssp HHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGT--TSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEE
T ss_pred HHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccC--CCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEE
Confidence 34456766677888888999999754 67899999864321 12235788999998884 6778899999988889999
Q ss_pred EEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcC---------------------------------
Q 004994 516 VYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVC--------------------------------- 562 (720)
Q Consensus 516 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~--------------------------------- 562 (720)
||||++|.+|.+.... ......++.+++++|..||...
T Consensus 88 v~e~i~G~~l~~~~~~---------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (263)
T 3tm0_A 88 LMSEADGVLCSEEYED---------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENW 158 (263)
T ss_dssp EEECCSSEEHHHHCCT---------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGG
T ss_pred EEEecCCeehhhccCC---------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccc
Confidence 9999999998875311 1123367888999999999821
Q ss_pred -----------------------CCCeeecCCCCCCeEEcCCCCeEEccccCCC
Q 004994 563 -----------------------EPPIVHGNFKSSNILLDEKLIVRVSDCGLAP 593 (720)
Q Consensus 563 -----------------------~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~ 593 (720)
...++|+|++|.|||++++..+.|+||+.+.
T Consensus 159 ~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 159 EEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp STTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred cccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 1458999999999999876667799999763
No 393
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.19 E-value=4.6e-13 Score=143.08 Aligned_cols=160 Identities=19% Similarity=0.213 Sum_probs=120.6
Q ss_pred cCceeEEEecCCcccccCCcC----cCC-CCCccEEeccCCcccccCCCCcc---ccCcEEEecCCcCCCCCcchhh---
Q 004994 70 FSNVTEIRLTGMNLGGVLADT----LGD-LESVINIDLSNNHIGGSIPSNLP---VTVRNFSLSGNQLTGSIPESLS--- 138 (720)
Q Consensus 70 ~~~l~~l~L~~n~l~~~~~~~----~~~-l~~L~~L~L~~N~l~g~ip~~~~---~~L~~L~Ls~N~l~g~~p~~l~--- 138 (720)
.++|+.|+|++|+|+...... +.. .++|+.|+|++|+|+..-...+. .+|+.|+|++|+|+..-...+.
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L 150 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLL 150 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHH
T ss_pred HhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHH
Confidence 467999999999998643333 332 37999999999999754333332 5899999999999855444443
Q ss_pred --cccccccccccccccCC----CCCchhcCCCCCceEeccCCcccc----cCCCCCCCCCCCceeecccccccccc---
Q 004994 139 --RLTQLLDLSLNNNHLNG----GIPDAFHQFTGLINFDLSANNLTG----QLPPSTRNLSSLYSLHLQNNKLSGTL--- 205 (720)
Q Consensus 139 --~l~~L~~L~l~~N~l~g----~~p~~~~~l~~L~~L~ls~N~l~g----~~p~~~~~l~~L~~L~l~~N~l~~~~--- 205 (720)
..++|+.|+|++|.|+. .++..+..+++|++|+|++|.|+. .++..+..+++|+.|+|++|.|+...
T Consensus 151 ~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~ 230 (372)
T 3un9_A 151 LHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALA 230 (372)
T ss_dssp HSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHH
T ss_pred HhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHH
Confidence 35789999999999974 355566889999999999999974 24556777889999999999997532
Q ss_pred --cccc-ccccceEEccCCcCcccCCc
Q 004994 206 --NVLE-DLHLIDLNIENNLFSGPIPE 229 (720)
Q Consensus 206 --~~~~-~~~l~~l~l~~N~l~g~~p~ 229 (720)
..+. ...|+.|+|++|.|+..-..
T Consensus 231 l~~~L~~~~~L~~L~Ls~N~i~~~g~~ 257 (372)
T 3un9_A 231 LARAAREHPSLELLHLYFNELSSEGRQ 257 (372)
T ss_dssp HHHHHHHCSSCCEEECTTSSCCHHHHH
T ss_pred HHHHHHhCCCCCEEeccCCCCCHHHHH
Confidence 2232 34599999999999854333
No 394
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.11 E-value=8.6e-11 Score=118.92 Aligned_cols=128 Identities=18% Similarity=0.177 Sum_probs=94.8
Q ss_pred ccCCCceEEEEEeCCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCc--eeEEEeEeccCCeEEEEEeeCCCCCHH
Q 004994 449 GEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGN--IVELIGYCNEHGQHLLVYDYGGNCTLH 526 (720)
Q Consensus 449 g~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~n--iv~l~~~~~~~~~~~lv~e~~~~gsL~ 526 (720)
+.|..+.||++...+|+.+++|..... ....+..|+++++.+.+.+ +.+++++..+.+..++||||+++.++.
T Consensus 29 ~gg~~~~v~~~~~~~g~~~vlK~~~~~-----~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~ 103 (264)
T 1nd4_A 29 IGCSDAAVFRLSAQGRPVLFVKTDLSG-----ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL 103 (264)
T ss_dssp CTTSSCEEEEEECTTSCCEEEEEECSC-----TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT
T ss_pred cCCCCceEEEEecCCCCeEEEEeCCcc-----cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC
Confidence 355669999998777888999997643 1235678888888885544 556888888888899999999998774
Q ss_pred HHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcC--------------------------------------------
Q 004994 527 DLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVC-------------------------------------------- 562 (720)
Q Consensus 527 ~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~-------------------------------------------- 562 (720)
... .+ ...++.++++.|..||...
T Consensus 104 --~~~-------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (264)
T 1nd4_A 104 --SSH-------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELF 171 (264)
T ss_dssp --TSC-------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHH
T ss_pred --cCc-------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHH
Confidence 211 01 1246667777777777642
Q ss_pred -----------CCCeeecCCCCCCeEEcCCCCeEEccccCCC
Q 004994 563 -----------EPPIVHGNFKSSNILLDEKLIVRVSDCGLAP 593 (720)
Q Consensus 563 -----------~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~ 593 (720)
...++|+|++|.|||++++..+.|+|||.+.
T Consensus 172 ~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 172 ARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp HHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred HHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 1239999999999999887667899999874
No 395
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.03 E-value=6.9e-10 Score=116.61 Aligned_cols=173 Identities=11% Similarity=0.073 Sum_probs=124.4
Q ss_pred CceeEee--------cCceeEEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCC-CccccCcEEEecCCc--C--
Q 004994 63 WQGVFCV--------FSNVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPS-NLPVTVRNFSLSGNQ--L-- 129 (720)
Q Consensus 63 w~gv~c~--------~~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~-~~~~~L~~L~Ls~N~--l-- 129 (720)
..+.|.. +.+|+.|+|.+ +++.+-+.+|.++++|+.|+|++|.+. .|+. .|...+..+.+..+. .
T Consensus 85 ~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~-~i~~~aF~~~~~l~~l~~~~~~~~~ 162 (329)
T 3sb4_A 85 PAYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAP-NLLPEALADSVTAIFIPLGSSDAYR 162 (329)
T ss_dssp CTTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCC-EECTTSSCTTTCEEEECTTCTHHHH
T ss_pred CHHHhcccccccccccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCcc-ccchhhhcCCCceEEecCcchhhhh
Confidence 3466777 89999999999 898877889999999999999999987 4443 343333333333222 0
Q ss_pred --C----------------------CCCcchh----------------------------hcccccccccccccccCCCC
Q 004994 130 --T----------------------GSIPESL----------------------------SRLTQLLDLSLNNNHLNGGI 157 (720)
Q Consensus 130 --~----------------------g~~p~~l----------------------------~~l~~L~~L~l~~N~l~g~~ 157 (720)
. +.++..+ ..+++|+.|+|++|+++...
T Consensus 163 ~~~~i~~~~f~~~~~L~~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~ 242 (329)
T 3sb4_A 163 FKNRWEHFAFIEGEPLETTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIP 242 (329)
T ss_dssp TSTTTTTSCEEESCCCEEEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEEC
T ss_pred ccccccccccccccccceeEEecCCCcHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceec
Confidence 0 0111110 13788999999999998655
Q ss_pred CchhcCCCCCceEeccCCcccccCCCCCCCCCCCc-eeecccccccccc-ccccccc-cceEEccCCcCcccCCcccCCC
Q 004994 158 PDAFHQFTGLINFDLSANNLTGQLPPSTRNLSSLY-SLHLQNNKLSGTL-NVLEDLH-LIDLNIENNLFSGPIPEKLLSI 234 (720)
Q Consensus 158 p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~-~L~l~~N~l~~~~-~~~~~~~-l~~l~l~~N~l~g~~p~~~~~l 234 (720)
+.+|.+|.+|+.|+|.+| ++..-+.+|.+|.+|+ .|+|.+ .++... ..+..+. |+.+++++|+++..-+..|.++
T Consensus 243 ~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~ 320 (329)
T 3sb4_A 243 DFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNG 320 (329)
T ss_dssp TTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTT
T ss_pred HhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCC
Confidence 667999999999999998 7755566789999999 999988 666554 3455554 9999999999985555677777
Q ss_pred ccccc
Q 004994 235 PNFRK 239 (720)
Q Consensus 235 ~~l~~ 239 (720)
++|+.
T Consensus 321 ~~L~~ 325 (329)
T 3sb4_A 321 VPSKL 325 (329)
T ss_dssp CCCCE
T ss_pred cchhh
Confidence 77664
No 396
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.98 E-value=2e-09 Score=114.56 Aligned_cols=142 Identities=15% Similarity=0.237 Sum_probs=105.5
Q ss_pred CCeeccCCCceEEEEEeCCCcEEEEEEec--ccccccccHHHHHHHHHHHHccC--CCceeEEEeEeccC---CeEEEEE
Q 004994 445 GNFIGEGLLGSVYKAELPGGKLLAVKKLS--NTVSQRQTDEEFLELASTISRLR--HGNIVELIGYCNEH---GQHLLVY 517 (720)
Q Consensus 445 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~--~~~~~~~~~~~~~~e~~~l~~l~--H~niv~l~~~~~~~---~~~~lv~ 517 (720)
.+.++.|.++.||++...+ ..+++|+.. .... ......+.+|+++++.+. +..+.++++++.+. +..++||
T Consensus 43 ~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~-~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vm 120 (359)
T 3dxp_A 43 VEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKL-LPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIM 120 (359)
T ss_dssp EEECCC-CCSCEEEEECSS-CEEEEECCCC-----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEE
T ss_pred EEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCC-CCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEE
Confidence 4678999999999998765 578888875 3221 122356788999999887 45688899998776 5689999
Q ss_pred eeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcC-----------------------------------
Q 004994 518 DYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVC----------------------------------- 562 (720)
Q Consensus 518 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~----------------------------------- 562 (720)
||+++..+.+.. ...++...+..++.++++.|+.||...
T Consensus 121 e~v~G~~l~~~~------~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (359)
T 3dxp_A 121 EFVSGRVLWDQS------LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESI 194 (359)
T ss_dssp ECCCCBCCCCTT------CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCC
T ss_pred EecCCeecCCCc------cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCC
Confidence 999997764311 233567778889999999999999831
Q ss_pred --------------------CCCeeecCCCCCCeEEcCCCC--eEEccccCCCC
Q 004994 563 --------------------EPPIVHGNFKSSNILLDEKLI--VRVSDCGLAPL 594 (720)
Q Consensus 563 --------------------~~~ivHrDlkp~NiLl~~~~~--~kl~DFGla~~ 594 (720)
...++|+|+++.|||+++++. +.|.||+.+..
T Consensus 195 ~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 195 PAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred hHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 246999999999999997753 68999998864
No 397
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.95 E-value=1.5e-11 Score=131.26 Aligned_cols=134 Identities=25% Similarity=0.272 Sum_probs=105.2
Q ss_pred CceeEEEecCCcccccCCcC-cCCCCCccEEeccCCcccccCCCCc-------cccCcEEEecCCcCCC----CCcchhh
Q 004994 71 SNVTEIRLTGMNLGGVLADT-LGDLESVINIDLSNNHIGGSIPSNL-------PVTVRNFSLSGNQLTG----SIPESLS 138 (720)
Q Consensus 71 ~~l~~l~L~~n~l~~~~~~~-~~~l~~L~~L~L~~N~l~g~ip~~~-------~~~L~~L~Ls~N~l~g----~~p~~l~ 138 (720)
.+|+.|+|++|.|+..-... ...+++|+.|+|++|+|+..-...+ ..+|+.|+|++|.|+. .++..+.
T Consensus 101 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~ 180 (372)
T 3un9_A 101 HALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLA 180 (372)
T ss_dssp SCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHH
T ss_pred CCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHh
Confidence 68999999999997543323 3346789999999999975433332 1579999999999974 2455567
Q ss_pred cccccccccccccccCC----CCCchhcCCCCCceEeccCCcccc----cCCCCCCCCCCCceeeccccccccc
Q 004994 139 RLTQLLDLSLNNNHLNG----GIPDAFHQFTGLINFDLSANNLTG----QLPPSTRNLSSLYSLHLQNNKLSGT 204 (720)
Q Consensus 139 ~l~~L~~L~l~~N~l~g----~~p~~~~~l~~L~~L~ls~N~l~g----~~p~~~~~l~~L~~L~l~~N~l~~~ 204 (720)
.+++|++|+|++|.|+. .++..+..+++|+.|+|++|.|+. .++..+..+++|+.|+|++|.|+..
T Consensus 181 ~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~ 254 (372)
T 3un9_A 181 GNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSE 254 (372)
T ss_dssp TCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHH
T ss_pred cCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHH
Confidence 88999999999999974 245667888999999999999975 2445566778999999999999754
No 398
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.90 E-value=2.5e-10 Score=130.13 Aligned_cols=128 Identities=9% Similarity=0.115 Sum_probs=66.2
Q ss_pred ecCceeEEEecCCcccccCCcCcCCC--CCccEEeccCCc-ccc-cCCCCc--cccCcEEEecCCcCCCC----Ccchhh
Q 004994 69 VFSNVTEIRLTGMNLGGVLADTLGDL--ESVINIDLSNNH-IGG-SIPSNL--PVTVRNFSLSGNQLTGS----IPESLS 138 (720)
Q Consensus 69 ~~~~l~~l~L~~n~l~~~~~~~~~~l--~~L~~L~L~~N~-l~g-~ip~~~--~~~L~~L~Ls~N~l~g~----~p~~l~ 138 (720)
.+++|+.|+|++|.+++..+..+..+ .+|++|+|++|. ++. .++... .++|++|+|++|.+++. ++..+.
T Consensus 110 ~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~ 189 (592)
T 3ogk_B 110 NLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQ 189 (592)
T ss_dssp HCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHH
T ss_pred hCCCCCeEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHh
Confidence 45778888888887776554444442 236666666554 110 011000 04566666666665544 333344
Q ss_pred cccccccccccccccCC----CCCchhcCCCCCceEeccCCcccccCCCCCCCCCCCceeecc
Q 004994 139 RLTQLLDLSLNNNHLNG----GIPDAFHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQ 197 (720)
Q Consensus 139 ~l~~L~~L~l~~N~l~g----~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~ 197 (720)
++++|+.|+|++|.+++ .++..+.++++|+.|+|++|.+.+ +|..+.++++|+.|+++
T Consensus 190 ~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~ 251 (592)
T 3ogk_B 190 HNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGG 251 (592)
T ss_dssp HCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEEC
T ss_pred cCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhccc
Confidence 55566666666666542 233334455566666666665552 33444444444444444
No 399
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.90 E-value=1.1e-10 Score=133.08 Aligned_cols=167 Identities=9% Similarity=0.050 Sum_probs=113.1
Q ss_pred ceeEEEecCCc-ccc-cCCcCcCCCCCccEEeccCCcccccCCCCc----c--ccCcEEEecCCcCC----CCCcchhhc
Q 004994 72 NVTEIRLTGMN-LGG-VLADTLGDLESVINIDLSNNHIGGSIPSNL----P--VTVRNFSLSGNQLT----GSIPESLSR 139 (720)
Q Consensus 72 ~l~~l~L~~n~-l~~-~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~----~--~~L~~L~Ls~N~l~----g~~p~~l~~ 139 (720)
+|+.|+|++|. ++. .++..+..+++|++|+|++|.+++.-+..+ . ++|+.|+|++|.++ +.++..+.+
T Consensus 139 ~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~ 218 (592)
T 3ogk_B 139 DLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARN 218 (592)
T ss_dssp GCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHH
T ss_pred cCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhh
Confidence 49999999887 221 123334578899999999998875522211 1 68999999999997 344555678
Q ss_pred ccccccccccccccCCCCCchhcCCCCCceEeccCCccc---ccCCCCCCCCCCCceeeccccccccccccccccc-cce
Q 004994 140 LTQLLDLSLNNNHLNGGIPDAFHQFTGLINFDLSANNLT---GQLPPSTRNLSSLYSLHLQNNKLSGTLNVLEDLH-LID 215 (720)
Q Consensus 140 l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~---g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~-l~~ 215 (720)
+++|+.|+|++|.+.+ +|..+.++++|+.|+++.+... +..+..+..+++|+.|+++++.....+..+..+. |+.
T Consensus 219 ~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~l~~~~~~~~~L~~ 297 (592)
T 3ogk_B 219 CRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPNEMPILFPFAAQIRK 297 (592)
T ss_dssp CTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCTTTGGGGGGGGGGCCE
T ss_pred CCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccccCccccchhHHHHHHhhcCCCcE
Confidence 8999999999999885 7788888999999998764333 2344566777788888887765444444444443 778
Q ss_pred EEccCCcCcccCC-cccCCCccccc
Q 004994 216 LNIENNLFSGPIP-EKLLSIPNFRK 239 (720)
Q Consensus 216 l~l~~N~l~g~~p-~~~~~l~~l~~ 239 (720)
|+|++|.+++... ..+..+++|+.
T Consensus 298 L~Ls~~~l~~~~~~~~~~~~~~L~~ 322 (592)
T 3ogk_B 298 LDLLYALLETEDHCTLIQKCPNLEV 322 (592)
T ss_dssp EEETTCCCCHHHHHHHHTTCTTCCE
T ss_pred EecCCCcCCHHHHHHHHHhCcCCCE
Confidence 8888877765433 22344444443
No 400
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.86 E-value=3.8e-09 Score=110.91 Aligned_cols=169 Identities=16% Similarity=0.202 Sum_probs=121.1
Q ss_pred cCceeEEEecCCccc--------------------ccCCcCcCC--------CCCccEEeccCCcccccCCC-Ccc--cc
Q 004994 70 FSNVTEIRLTGMNLG--------------------GVLADTLGD--------LESVINIDLSNNHIGGSIPS-NLP--VT 118 (720)
Q Consensus 70 ~~~l~~l~L~~n~l~--------------------~~~~~~~~~--------l~~L~~L~L~~N~l~g~ip~-~~~--~~ 118 (720)
+++|+.|||++|++. ...+..|.+ +++|+.|+|++ +++ .|+. .|. .+
T Consensus 48 l~~L~~LdLs~n~i~~~~~~~~~~~~~~~~~~~~~~I~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~-~I~~~aF~~~~~ 125 (329)
T 3sb4_A 48 FPSLKVLDISNAEIKMYSGKAGTYPNGKFYIYMANFVPAYAFSNVVNGVTKGKQTLEKVILSE-KIK-NIEDAAFKGCDN 125 (329)
T ss_dssp CTTCCEEEEEEEEECCEEESSSSSGGGCCEEECTTEECTTTTEEEETTEEEECTTCCC-CBCT-TCC-EECTTTTTTCTT
T ss_pred hccCeEEecCcceeEEecCccccccccccccccccccCHHHhcccccccccccCCCcEEECCc-ccc-chhHHHhhcCcc
Confidence 678999999999988 222345667 89999999998 887 5554 443 68
Q ss_pred CcEEEecCCcCCCCCcchhhccccccccccccccc----CC----------------------CCCchh-----------
Q 004994 119 VRNFSLSGNQLTGSIPESLSRLTQLLDLSLNNNHL----NG----------------------GIPDAF----------- 161 (720)
Q Consensus 119 L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~l~~N~l----~g----------------------~~p~~~----------- 161 (720)
|+.|+|++|.++...+..|.++.++..+.+..+.. .. .++..+
T Consensus 126 L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~~~i~~~~~~~l~~~~~~~~~~~~~~~ 205 (329)
T 3sb4_A 126 LKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLETTIQVGAMGKLEDEIMKAGLQPRDIN 205 (329)
T ss_dssp CCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCEEEEEECTTCCHHHHHHHTTCCGGGCS
T ss_pred cceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccceeEEecCCCcHHHHHhhcccCccccc
Confidence 99999999998866667788888777777655321 00 000000
Q ss_pred -----------------cCCCCCceEeccCCcccccCCCCCCCCCCCceeecccccccccc-ccccccc-cc-eEEccCC
Q 004994 162 -----------------HQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNNKLSGTL-NVLEDLH-LI-DLNIENN 221 (720)
Q Consensus 162 -----------------~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~-~~~~~~~-l~-~l~l~~N 221 (720)
..+++|+.|+|++|+++..-+..|.+|.+|+.|+|.+| ++... ..+..+. |+ .+++.+
T Consensus 206 ~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~- 283 (329)
T 3sb4_A 206 FLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA- 283 (329)
T ss_dssp EEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-
T ss_pred eEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-
Confidence 13789999999999998555567999999999999998 66554 3466665 88 999988
Q ss_pred cCcccCCcccCCCccccccCc
Q 004994 222 LFSGPIPEKLLSIPNFRKDGN 242 (720)
Q Consensus 222 ~l~g~~p~~~~~l~~l~~~~n 242 (720)
.++..-+..|.++++|+....
T Consensus 284 ~l~~I~~~aF~~c~~L~~l~l 304 (329)
T 3sb4_A 284 SVTAIEFGAFMGCDNLRYVLA 304 (329)
T ss_dssp TCCEECTTTTTTCTTEEEEEE
T ss_pred cceEEchhhhhCCccCCEEEe
Confidence 677445567888877776543
No 401
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.83 E-value=1.3e-09 Score=113.23 Aligned_cols=187 Identities=18% Similarity=0.206 Sum_probs=119.3
Q ss_pred CCeeccCCCceEEEEEeCCCcEEEEEEecccccccccHHHHHHHHHHHHccC-CCc--eeEEEeEeccCC---eEEEEEe
Q 004994 445 GNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLR-HGN--IVELIGYCNEHG---QHLLVYD 518 (720)
Q Consensus 445 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~-H~n--iv~l~~~~~~~~---~~~lv~e 518 (720)
.+.++.|.+..||++. ..+++|+.... .....+.+|.++++.+. +.. +.+++.+....+ ..|+||+
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~----~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~ 96 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS----RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFT 96 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH----HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEE
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc----chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEc
Confidence 4678999999999863 45888886432 33467889999998884 332 445555544333 4589999
Q ss_pred eCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhc-------------------------------------
Q 004994 519 YGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEV------------------------------------- 561 (720)
Q Consensus 519 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~------------------------------------- 561 (720)
+++|..+.+... ..++..++..++.++++.|+.||..
T Consensus 97 ~i~G~~l~~~~~------~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (304)
T 3sg8_A 97 KIKGVPLTPLLL------NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQM 170 (304)
T ss_dssp CCCCEECCHHHH------HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHH
T ss_pred ccCCeECCcccc------ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccH
Confidence 999977764321 2345566667777777777777751
Q ss_pred ------------------CCCCeeecCCCCCCeEEcC--CCCeEEccccCCCCCCCCCCc-cc-------c----cCccc
Q 004994 562 ------------------CEPPIVHGNFKSSNILLDE--KLIVRVSDCGLAPLLFSGSTN-EL-------S----EGLLT 609 (720)
Q Consensus 562 ------------------~~~~ivHrDlkp~NiLl~~--~~~~kl~DFGla~~~~~~~~~-~~-------~----~~~~~ 609 (720)
..+.++|+|++|.||++++ +..+.|+||+.+..-.....- .. . .....
T Consensus 171 ~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~ 250 (304)
T 3sg8_A 171 KKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILN 250 (304)
T ss_dssp HHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHH
Confidence 1235899999999999998 456789999987543211000 00 0 00001
Q ss_pred cccCCC-CccCCCCCCCccchHhHHHHHHHHHhCCCCC
Q 004994 610 AHGSGA-PEFESGSYSCQSDVYSLGVVMLELLTGRKPY 646 (720)
Q Consensus 610 ~~~~~a-PE~~~~~~~~~~Dv~S~Gvvl~elltG~~Pf 646 (720)
.++... |+... ......+.|+++.++|++.+|+.+|
T Consensus 251 ~Y~~~~~~~~~~-r~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 251 HYKHKDIPTVLE-KYRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp HHTCSCHHHHHH-HHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HcCCCCcHHHHH-HHHHHHHHHHHHHHHHHHHcCCHHH
Confidence 111111 11110 0122368999999999999998776
No 402
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.71 E-value=4.7e-10 Score=112.80 Aligned_cols=81 Identities=23% Similarity=0.342 Sum_probs=50.1
Q ss_pred EEecCCcCCCCCcc----hhhcccccccccccccccCC--CCCchhcCCCCCceEeccCCcccccCCCCCCCCC--CCce
Q 004994 122 FSLSGNQLTGSIPE----SLSRLTQLLDLSLNNNHLNG--GIPDAFHQFTGLINFDLSANNLTGQLPPSTRNLS--SLYS 193 (720)
Q Consensus 122 L~Ls~N~l~g~~p~----~l~~l~~L~~L~l~~N~l~g--~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~--~L~~ 193 (720)
++++.|+.. .++. ...++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|+.
T Consensus 148 l~l~~N~~~-~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~ 224 (267)
T 3rw6_A 148 IDVVLNRRS-CMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEE 224 (267)
T ss_dssp CCCCTTSHH-HHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSE
T ss_pred ccccCCHHH-HHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcce
Confidence 556666433 2222 22456777777777777776 4456666777777777777777743 2333343 7777
Q ss_pred eecccccccccc
Q 004994 194 LHLQNNKLSGTL 205 (720)
Q Consensus 194 L~l~~N~l~~~~ 205 (720)
|+|++|.+++.+
T Consensus 225 L~L~~Npl~~~~ 236 (267)
T 3rw6_A 225 LWLDGNSLCDTF 236 (267)
T ss_dssp EECTTSTTGGGC
T ss_pred EEccCCcCcccc
Confidence 777777777643
No 403
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.60 E-value=2.2e-09 Score=122.23 Aligned_cols=130 Identities=15% Similarity=0.174 Sum_probs=92.7
Q ss_pred ecCceeEEEecCCcccccCCcCcC-CCCCccEEeccCC-ccccc-CCCCcc--ccCcEEEecCCcCCCCCcchhh----c
Q 004994 69 VFSNVTEIRLTGMNLGGVLADTLG-DLESVINIDLSNN-HIGGS-IPSNLP--VTVRNFSLSGNQLTGSIPESLS----R 139 (720)
Q Consensus 69 ~~~~l~~l~L~~n~l~~~~~~~~~-~l~~L~~L~L~~N-~l~g~-ip~~~~--~~L~~L~Ls~N~l~g~~p~~l~----~ 139 (720)
.+++|+.|+|++|.+++..+..+. .+++|+.|+|++| .++.. ++..+. ++|++|+|++|.+++..+..+. .
T Consensus 103 ~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~ 182 (594)
T 2p1m_B 103 SYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDT 182 (594)
T ss_dssp HCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTT
T ss_pred hCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhc
Confidence 467899999999999887666665 6889999999988 55532 332221 6899999999998876665554 5
Q ss_pred ccccccccccccc--cCC-CCCchhcCCCCCceEeccCC-cccccCCCCCCCCCCCceeecccc
Q 004994 140 LTQLLDLSLNNNH--LNG-GIPDAFHQFTGLINFDLSAN-NLTGQLPPSTRNLSSLYSLHLQNN 199 (720)
Q Consensus 140 l~~L~~L~l~~N~--l~g-~~p~~~~~l~~L~~L~ls~N-~l~g~~p~~~~~l~~L~~L~l~~N 199 (720)
+++|+.|+|++|. ++. .++.-+.++++|+.|+|++| .++ .+|..+.++++|+.|+++.+
T Consensus 183 ~~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~-~l~~~~~~~~~L~~L~l~~~ 245 (594)
T 2p1m_B 183 YTSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLE-KLATLLQRAPQLEELGTGGY 245 (594)
T ss_dssp CCCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHH-HHHHHHHHCTTCSEEECSBC
T ss_pred CCcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHH-HHHHHHhcCCcceEcccccc
Confidence 6689999999887 221 11122345789999999988 444 36666777777777775544
No 404
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.59 E-value=1.7e-09 Score=123.11 Aligned_cols=155 Identities=16% Similarity=0.198 Sum_probs=110.6
Q ss_pred eEeecCceeEEEecCCcccc---cCCcC------------cCCCCCccEEeccCCcccccCCCCcc---ccCcEEEecCC
Q 004994 66 VFCVFSNVTEIRLTGMNLGG---VLADT------------LGDLESVINIDLSNNHIGGSIPSNLP---VTVRNFSLSGN 127 (720)
Q Consensus 66 v~c~~~~l~~l~L~~n~l~~---~~~~~------------~~~l~~L~~L~L~~N~l~g~ip~~~~---~~L~~L~Ls~N 127 (720)
++..+++|+.|+|+++.... ..|.. ...+++|+.|+|++|.+++..+..+. ++|+.|+|++|
T Consensus 61 ~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~ 140 (594)
T 2p1m_B 61 VIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSC 140 (594)
T ss_dssp HHHHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESC
T ss_pred HHhhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCc
Confidence 44568899999999986432 22222 34688999999999999877666663 69999999999
Q ss_pred -cCCCC-CcchhhcccccccccccccccCCCCCchhc----CCCCCceEeccCCc--ccc-cCCCCCCCCCCCceeeccc
Q 004994 128 -QLTGS-IPESLSRLTQLLDLSLNNNHLNGGIPDAFH----QFTGLINFDLSANN--LTG-QLPPSTRNLSSLYSLHLQN 198 (720)
Q Consensus 128 -~l~g~-~p~~l~~l~~L~~L~l~~N~l~g~~p~~~~----~l~~L~~L~ls~N~--l~g-~~p~~~~~l~~L~~L~l~~ 198 (720)
.++.. ++..+.++++|++|+|++|.+++..+..+. .+++|+.|+|++|. ++. .++..+.++++|+.|+|++
T Consensus 141 ~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~ 220 (594)
T 2p1m_B 141 EGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNR 220 (594)
T ss_dssp EEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCT
T ss_pred CCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCC
Confidence 56532 555566899999999999999876555554 66799999999997 221 1222234579999999999
Q ss_pred c-cccccccccccc-ccceEEccC
Q 004994 199 N-KLSGTLNVLEDL-HLIDLNIEN 220 (720)
Q Consensus 199 N-~l~~~~~~~~~~-~l~~l~l~~ 220 (720)
| .+.+.+..+..+ .|++|+++.
T Consensus 221 ~~~~~~l~~~~~~~~~L~~L~l~~ 244 (594)
T 2p1m_B 221 AVPLEKLATLLQRAPQLEELGTGG 244 (594)
T ss_dssp TSCHHHHHHHHHHCTTCSEEECSB
T ss_pred CCcHHHHHHHHhcCCcceEccccc
Confidence 8 455533334443 378887543
No 405
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=98.57 E-value=2.3e-07 Score=99.81 Aligned_cols=167 Identities=13% Similarity=0.142 Sum_probs=110.5
Q ss_pred ceeEeecCceeEEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCC-Ccc--ccCcEEEecCCcCCCCCcchhhcc
Q 004994 64 QGVFCVFSNVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPS-NLP--VTVRNFSLSGNQLTGSIPESLSRL 140 (720)
Q Consensus 64 ~gv~c~~~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~-~~~--~~L~~L~Ls~N~l~g~~p~~l~~l 140 (720)
.+.|..+.+|+.++|.+|+++......|. ..+|+.+.|.+| +. .|+. .|. .+|+.|+|..| ++..-...|.+
T Consensus 173 ~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~-~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~- 247 (401)
T 4fdw_A 173 EDIFYYCYNLKKADLSKTKITKLPASTFV-YAGIEEVLLPVT-LK-EIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE- 247 (401)
T ss_dssp SSTTTTCTTCCEEECTTSCCSEECTTTTT-TCCCSEEECCTT-CC-EECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-
T ss_pred HHHhhCcccCCeeecCCCcceEechhhEe-ecccCEEEeCCc-hh-eehhhHhhCCCCCCEEecCCC-ccCcccccccc-
Confidence 35666778999999999999866666666 588999998854 66 4444 333 57888888875 55344455666
Q ss_pred cccccccccccccCCCCCchhcCCCCCceEeccCCccc-----ccCCCCCCCCCCCceeecccccccccc-cccccc-cc
Q 004994 141 TQLLDLSLNNNHLNGGIPDAFHQFTGLINFDLSANNLT-----GQLPPSTRNLSSLYSLHLQNNKLSGTL-NVLEDL-HL 213 (720)
Q Consensus 141 ~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~-----g~~p~~~~~l~~L~~L~l~~N~l~~~~-~~~~~~-~l 213 (720)
.+|+.+.| .|.++..-..+|.+|++|+.+++.+|.+. ..-+..|.+|++|+.++|.+ .++... ..+..+ .|
T Consensus 248 ~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~~-~i~~I~~~aF~~c~~L 325 (401)
T 4fdw_A 248 SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIPE-SIRILGQGLLGGNRKV 325 (401)
T ss_dssp CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCCT-TCCEECTTTTTTCCSC
T ss_pred CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeCC-ceEEEhhhhhcCCCCc
Confidence 67888888 44565445667888888888888877764 23456778888888888874 455443 234443 47
Q ss_pred ceEEccCCcCcccCCcccCCCccccc
Q 004994 214 IDLNIENNLFSGPIPEKLLSIPNFRK 239 (720)
Q Consensus 214 ~~l~l~~N~l~g~~p~~~~~l~~l~~ 239 (720)
+.++|.+| ++..-+..|.++ +|+.
T Consensus 326 ~~l~lp~~-l~~I~~~aF~~~-~L~~ 349 (401)
T 4fdw_A 326 TQLTIPAN-VTQINFSAFNNT-GIKE 349 (401)
T ss_dssp CEEEECTT-CCEECTTSSSSS-CCCE
T ss_pred cEEEECcc-ccEEcHHhCCCC-CCCE
Confidence 78888554 553333455554 4443
No 406
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.54 E-value=2.4e-08 Score=105.60 Aligned_cols=156 Identities=15% Similarity=0.199 Sum_probs=100.7
Q ss_pred ecCceeEEEecCCccc---------ccCCcCcCCCCCccEEeccCCcccccCCCCccccCcEEEecCCcCCCCCcchhh-
Q 004994 69 VFSNVTEIRLTGMNLG---------GVLADTLGDLESVINIDLSNNHIGGSIPSNLPVTVRNFSLSGNQLTGSIPESLS- 138 (720)
Q Consensus 69 ~~~~l~~l~L~~n~l~---------~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~~~L~~L~Ls~N~l~g~~p~~l~- 138 (720)
.+++|+.|.+.++... +.+...+..+++|+.|+|++|.-. .+|..-..+|+.|+|..|.++...-..+.
T Consensus 137 ~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l-~l~~~~~~~L~~L~L~~~~l~~~~l~~l~~ 215 (362)
T 2ra8_A 137 KFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL-SIGKKPRPNLKSLEIISGGLPDSVVEDILG 215 (362)
T ss_dssp HHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-BCCSCBCTTCSEEEEECSBCCHHHHHHHHH
T ss_pred hcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-eeccccCCCCcEEEEecCCCChHHHHHHHH
Confidence 4578889988765431 224455677889999999887311 34442136899999988887644434454
Q ss_pred -cccccccccccc--cccCCC-----CCchh--cCCCCCceEeccCCcccccCCCCC---CCCCCCceeecccccccccc
Q 004994 139 -RLTQLLDLSLNN--NHLNGG-----IPDAF--HQFTGLINFDLSANNLTGQLPPST---RNLSSLYSLHLQNNKLSGTL 205 (720)
Q Consensus 139 -~l~~L~~L~l~~--N~l~g~-----~p~~~--~~l~~L~~L~ls~N~l~g~~p~~~---~~l~~L~~L~l~~N~l~~~~ 205 (720)
.+++|+.|+|+. |...+. +...+ ..+++|+.|+|++|.+....+..+ ..+++|+.|+|+.|.|+..-
T Consensus 216 ~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G 295 (362)
T 2ra8_A 216 SDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEG 295 (362)
T ss_dssp SBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHH
T ss_pred ccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHH
Confidence 688999998853 332221 11122 247889999999888874332222 35788999999999887531
Q ss_pred -----cccccc-ccceEEccCCcCcc
Q 004994 206 -----NVLEDL-HLIDLNIENNLFSG 225 (720)
Q Consensus 206 -----~~~~~~-~l~~l~l~~N~l~g 225 (720)
..+..+ +|+.|+|++|.++.
T Consensus 296 ~~~L~~~L~~l~~L~~L~L~~n~i~d 321 (362)
T 2ra8_A 296 ARLLLDHVDKIKHLKFINMKYNYLSD 321 (362)
T ss_dssp HHHHHTTHHHHTTCSEEECCSBBCCH
T ss_pred HHHHHhhcccCCcceEEECCCCcCCH
Confidence 222333 48889999888764
No 407
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=98.50 E-value=4.6e-07 Score=97.43 Aligned_cols=163 Identities=17% Similarity=0.141 Sum_probs=109.9
Q ss_pred ceeEEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCCCcc--ccCcEEEecCCcCCCCCcchhhccccccccccc
Q 004994 72 NVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSNLP--VTVRNFSLSGNQLTGSIPESLSRLTQLLDLSLN 149 (720)
Q Consensus 72 ~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~--~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~l~ 149 (720)
+|+.+.|.+ ++...-+.+|.++++|+.++|++|+++ .||.... .+|+.+.|.+| ++..-...|.+|++|+.|+|.
T Consensus 158 ~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~-~I~~~aF~~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~ 234 (401)
T 4fdw_A 158 TVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKIT-KLPASTFVYAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIP 234 (401)
T ss_dssp CCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCS-EECTTTTTTCCCSEEECCTT-CCEECTTTTTTCTTCCCEECC
T ss_pred CceEEEeCC-CccEehHHHhhCcccCCeeecCCCcce-EechhhEeecccCEEEeCCc-hheehhhHhhCCCCCCEEecC
Confidence 477777775 666666677888888888888888887 5554432 67888888744 664555668888888888887
Q ss_pred ccccCCCCCchhcCCCCCceEeccCCcccccCCCCCCCCCCCceeeccccccc-----ccc-cccccc-ccceEEccCCc
Q 004994 150 NNHLNGGIPDAFHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNNKLS-----GTL-NVLEDL-HLIDLNIENNL 222 (720)
Q Consensus 150 ~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~-----~~~-~~~~~~-~l~~l~l~~N~ 222 (720)
+| ++..-..+|.+ .+|+.+.| .|+++..-+.+|.+|++|+.+++.+|.+. ... ..+..+ .|+.++|.+ .
T Consensus 235 ~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~~-~ 310 (401)
T 4fdw_A 235 EN-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIPE-S 310 (401)
T ss_dssp TT-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCCT-T
T ss_pred CC-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeCC-c
Confidence 75 44344556666 67888888 45566445667888888888888888775 111 234444 488888874 4
Q ss_pred CcccCCcccCCCccccccC
Q 004994 223 FSGPIPEKLLSIPNFRKDG 241 (720)
Q Consensus 223 l~g~~p~~~~~l~~l~~~~ 241 (720)
++-.-...|.++.+|+...
T Consensus 311 i~~I~~~aF~~c~~L~~l~ 329 (401)
T 4fdw_A 311 IRILGQGLLGGNRKVTQLT 329 (401)
T ss_dssp CCEECTTTTTTCCSCCEEE
T ss_pred eEEEhhhhhcCCCCccEEE
Confidence 6633334565656655443
No 408
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.49 E-value=5.4e-07 Score=93.97 Aligned_cols=136 Identities=15% Similarity=0.143 Sum_probs=97.2
Q ss_pred CCCCCCeeccCCCceEEEEEeCCCcEEEEEEecccccccccHHHHHHHHHHHHccCC----CceeEEEeEeccCCeEEEE
Q 004994 441 SFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRH----GNIVELIGYCNEHGQHLLV 516 (720)
Q Consensus 441 ~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H----~niv~l~~~~~~~~~~~lv 516 (720)
.....+.++.|....||++ |+.+++|+.... .....+..|.++++.+.+ ..+.+++++ +..++|
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~----~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lv 105 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKRD----SVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNI 105 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESSH----HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEE
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCcH----HHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEE
Confidence 4556678999999999998 567888876432 223468899999888876 234555555 467899
Q ss_pred EeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCC---------------------------------
Q 004994 517 YDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCE--------------------------------- 563 (720)
Q Consensus 517 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~--------------------------------- 563 (720)
|||++|..+.+.. ...++..++..++.++++.|+.||....
T Consensus 106 me~i~G~~l~~~~------~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (320)
T 3r70_A 106 MKYIKGERITYEQ------YHKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQ 179 (320)
T ss_dssp EECCCCBCCCHHH------HTTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTT
T ss_pred EeecCCccccccc------cccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcc
Confidence 9999998876322 1223445556666677777777764321
Q ss_pred ---------------------------CCeeecCCCCCCeEEcCCCCeEEccccCCCC
Q 004994 564 ---------------------------PPIVHGNFKSSNILLDEKLIVRVSDCGLAPL 594 (720)
Q Consensus 564 ---------------------------~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~ 594 (720)
+.++|+|++|.|||++++..+.|.||+.+..
T Consensus 180 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~ 237 (320)
T 3r70_A 180 LLTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNV 237 (320)
T ss_dssp CCCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEE
T ss_pred cccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCccccc
Confidence 2359999999999999976679999998854
No 409
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.46 E-value=1.7e-08 Score=101.35 Aligned_cols=106 Identities=18% Similarity=0.260 Sum_probs=79.7
Q ss_pred hhccccccc--ccccccccC---CCCCchhcCCCCCceEeccCCcccc--cCCCCCCCCCCCceeeccccccccc--ccc
Q 004994 137 LSRLTQLLD--LSLNNNHLN---GGIPDAFHQFTGLINFDLSANNLTG--QLPPSTRNLSSLYSLHLQNNKLSGT--LNV 207 (720)
Q Consensus 137 l~~l~~L~~--L~l~~N~l~---g~~p~~~~~l~~L~~L~ls~N~l~g--~~p~~~~~l~~L~~L~l~~N~l~~~--~~~ 207 (720)
|...+.|.. ++++.|+.. +.++....++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. +..
T Consensus 137 l~~dp~L~~~~l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~~~l~~ 216 (267)
T 3rw6_A 137 LRSDPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDK 216 (267)
T ss_dssp GGGCHHHHHTTCCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSGGGGGG
T ss_pred cCCCcchhhcCccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCchhhhh
Confidence 555566665 778888543 2233333578999999999999997 5667778999999999999999985 344
Q ss_pred ccccccceEEccCCcCcccCCc-------ccCCCccccccCc
Q 004994 208 LEDLHLIDLNIENNLFSGPIPE-------KLLSIPNFRKDGN 242 (720)
Q Consensus 208 ~~~~~l~~l~l~~N~l~g~~p~-------~~~~l~~l~~~~n 242 (720)
+..+.|++|+|++|.+++.+|. .+..+++|+.++.
T Consensus 217 l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LDg 258 (267)
T 3rw6_A 217 IKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLDG 258 (267)
T ss_dssp GTTSCCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEESS
T ss_pred cccCCcceEEccCCcCccccCcchhHHHHHHHHCcccCeECC
Confidence 5555799999999999998873 2556677765543
No 410
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.36 E-value=6e-08 Score=102.60 Aligned_cols=155 Identities=14% Similarity=0.199 Sum_probs=106.0
Q ss_pred eeEeecCceeEEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCCCcc----ccCcEEEecC--CcCCCC-----C
Q 004994 65 GVFCVFSNVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSNLP----VTVRNFSLSG--NQLTGS-----I 133 (720)
Q Consensus 65 gv~c~~~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~----~~L~~L~Ls~--N~l~g~-----~ 133 (720)
.+...+++|+.|+|++|.-. .++. +. +++|+.|+|..|.++...-..+. ++|+.|+|+. |...|. +
T Consensus 166 ~ll~~~P~L~~L~L~g~~~l-~l~~-~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l 242 (362)
T 2ra8_A 166 PVLDAMPLLNNLKIKGTNNL-SIGK-KP-RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVF 242 (362)
T ss_dssp HHHHTCTTCCEEEEECCBTC-BCCS-CB-CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGT
T ss_pred HHHhcCCCCcEEEEeCCCCc-eecc-cc-CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHH
Confidence 33445689999999988311 2343 43 89999999999888643222221 5899999863 332222 1
Q ss_pred cchh--hcccccccccccccccCCCCCchhc---CCCCCceEeccCCccccc----CCCCCCCCCCCceeeccccccccc
Q 004994 134 PESL--SRLTQLLDLSLNNNHLNGGIPDAFH---QFTGLINFDLSANNLTGQ----LPPSTRNLSSLYSLHLQNNKLSGT 204 (720)
Q Consensus 134 p~~l--~~l~~L~~L~l~~N~l~g~~p~~~~---~l~~L~~L~ls~N~l~g~----~p~~~~~l~~L~~L~l~~N~l~~~ 204 (720)
...+ ..+++|+.|+|++|.+.+..+..+. .+++|+.|+|+.|.|++. ++..+.++++|+.|+|++|.++..
T Consensus 243 ~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~ 322 (362)
T 2ra8_A 243 RPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDE 322 (362)
T ss_dssp GGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHH
T ss_pred HHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHH
Confidence 1122 2478999999999998754444443 478999999999999863 555667789999999999998754
Q ss_pred c-ccccccccceEEccCCc
Q 004994 205 L-NVLEDLHLIDLNIENNL 222 (720)
Q Consensus 205 ~-~~~~~~~l~~l~l~~N~ 222 (720)
. ..+...-...+++++|+
T Consensus 323 ~~~~l~~alg~~~~~~~~~ 341 (362)
T 2ra8_A 323 MKKELQKSLPMKIDVSDSQ 341 (362)
T ss_dssp HHHHHHHHCCSEEECCSBC
T ss_pred HHHHHHHHcCCEEEecCCc
Confidence 2 22332114568888876
No 411
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.36 E-value=2e-08 Score=95.92 Aligned_cols=63 Identities=16% Similarity=0.279 Sum_probs=27.9
Q ss_pred cccccccccccccccCCC----CCchhcCCCCCceEec--cCCccccc----CCCCCCCCCCCceeecccccc
Q 004994 139 RLTQLLDLSLNNNHLNGG----IPDAFHQFTGLINFDL--SANNLTGQ----LPPSTRNLSSLYSLHLQNNKL 201 (720)
Q Consensus 139 ~l~~L~~L~l~~N~l~g~----~p~~~~~l~~L~~L~l--s~N~l~g~----~p~~~~~l~~L~~L~l~~N~l 201 (720)
..++|++|+|++|.|+.. +...+...++|++|+| ++|.|+.. +...+...++|+.|+|++|.+
T Consensus 91 ~n~~L~~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i 163 (185)
T 1io0_A 91 VNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQ 163 (185)
T ss_dssp HCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSH
T ss_pred hCCCcCEEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCC
Confidence 334455555555554421 2233444445555555 44555421 222233334455555555544
No 412
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.34 E-value=4.4e-08 Score=93.49 Aligned_cols=110 Identities=19% Similarity=0.312 Sum_probs=86.9
Q ss_pred ecCceeEEEecCC-cccc----cCCcCcCCCCCccEEeccCCcccccC----CCCcc--ccCcEEEecCCcCCCC----C
Q 004994 69 VFSNVTEIRLTGM-NLGG----VLADTLGDLESVINIDLSNNHIGGSI----PSNLP--VTVRNFSLSGNQLTGS----I 133 (720)
Q Consensus 69 ~~~~l~~l~L~~n-~l~~----~~~~~~~~l~~L~~L~L~~N~l~g~i----p~~~~--~~L~~L~Ls~N~l~g~----~ 133 (720)
..++|++|+|++| .+.. .+...+...++|++|+|++|+|...- ...+. .+|++|+|++|.|+.. +
T Consensus 34 ~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l 113 (185)
T 1io0_A 34 NDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILAL 113 (185)
T ss_dssp TCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHH
T ss_pred cCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHH
Confidence 3568999999999 8874 24566778899999999999997432 22222 5799999999999853 4
Q ss_pred cchhhcccccccccc--cccccCCC----CCchhcCCCCCceEeccCCccc
Q 004994 134 PESLSRLTQLLDLSL--NNNHLNGG----IPDAFHQFTGLINFDLSANNLT 178 (720)
Q Consensus 134 p~~l~~l~~L~~L~l--~~N~l~g~----~p~~~~~l~~L~~L~ls~N~l~ 178 (720)
...+...++|+.|+| ++|.|+.. +...+...++|++|+|++|.+.
T Consensus 114 ~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 114 VEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 566777889999999 88999743 4455667799999999999985
No 413
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.30 E-value=4e-06 Score=86.66 Aligned_cols=135 Identities=17% Similarity=0.181 Sum_probs=88.4
Q ss_pred CeeccCCCceEEEEEeCCCcEEEEEEecccccccccHHHHHHHHHHHHccCCC---ceeEEEeEec-cCCeEEEEEeeCC
Q 004994 446 NFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHG---NIVELIGYCN-EHGQHLLVYDYGG 521 (720)
Q Consensus 446 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~---niv~l~~~~~-~~~~~~lv~e~~~ 521 (720)
+.++.|....||+. |..+++|+-.. ......+..|.++++.+.+. .+.+++.++. ..+..++||||++
T Consensus 25 ~~l~~G~~n~v~~v----g~~~VlR~~~~----~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~ 96 (306)
T 3tdw_A 25 ESLGEGFRNYAILV----NGDWVFRFPKS----QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQ 96 (306)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEESS----HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCC
T ss_pred eecCCCcceeEEEE----CCEEEEEecCC----chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccC
Confidence 56788888899998 56688887532 23346788999999999753 3566777764 4567889999999
Q ss_pred CCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhc----------------------------------------
Q 004994 522 NCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEV---------------------------------------- 561 (720)
Q Consensus 522 ~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~---------------------------------------- 561 (720)
|..+.+... ..++...+..++.++++.|..||..
T Consensus 97 G~~l~~~~~------~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~ 170 (306)
T 3tdw_A 97 GQILGEDGM------AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRD 170 (306)
T ss_dssp SEECHHHHH------TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHH
T ss_pred CeECchhhh------hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHH
Confidence 977765211 0112222222333333333333321
Q ss_pred -----------------CCCCeeecCCCCCCeEEcC---CCC-eEEccccCCCC
Q 004994 562 -----------------CEPPIVHGNFKSSNILLDE---KLI-VRVSDCGLAPL 594 (720)
Q Consensus 562 -----------------~~~~ivHrDlkp~NiLl~~---~~~-~kl~DFGla~~ 594 (720)
..+.++|+|+++.||+++. ++. +.|+||+.+..
T Consensus 171 ~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 171 YLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 3346799999999999987 455 48999998743
No 414
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.30 E-value=3.2e-06 Score=85.60 Aligned_cols=134 Identities=15% Similarity=0.165 Sum_probs=92.7
Q ss_pred eeccCCCc-eEEEEEeC-CCcEEEEEEecccccccccHHHHHHHHHHHHccC-CCceeEEEeEeccCCeEEEEEeeCCCC
Q 004994 447 FIGEGLLG-SVYKAELP-GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLR-HGNIVELIGYCNEHGQHLLVYDYGGNC 523 (720)
Q Consensus 447 ~lg~G~~g-~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~~~~~~~~~~~lv~e~~~~g 523 (720)
.+..|..+ .||+.... ++..+++|+-.. .....+.+|.+.|+.+. +--+.++++++.+.+..++|||++++.
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~-----~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~ 105 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKG-----SVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGK 105 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEET-----HHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSE
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCC-----CCHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCc
Confidence 45566666 58998654 567889998643 23456788999988884 334678899998889999999999998
Q ss_pred CHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcC-----------------------------------------
Q 004994 524 TLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVC----------------------------------------- 562 (720)
Q Consensus 524 sL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~----------------------------------------- 562 (720)
++.+...... .....+..++++.|.-||...
T Consensus 106 ~~~~~~~~~~--------~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (272)
T 4gkh_A 106 TAFQVLEEYP--------DSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVE 177 (272)
T ss_dssp EHHHHHHHCG--------GGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHH
T ss_pred cccccccCCH--------HHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHH
Confidence 8776542111 112234444444444444321
Q ss_pred --------------CCCeeecCCCCCCeEEcCCCCeEEccccCCC
Q 004994 563 --------------EPPIVHGNFKSSNILLDEKLIVRVSDCGLAP 593 (720)
Q Consensus 563 --------------~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~ 593 (720)
...++|+|+.+.|||+++++.+-|.||+.+.
T Consensus 178 ~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~ 222 (272)
T 4gkh_A 178 QVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG 222 (272)
T ss_dssp HHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence 1237999999999999988777899999774
No 415
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.23 E-value=6.4e-06 Score=84.22 Aligned_cols=75 Identities=20% Similarity=0.220 Sum_probs=59.9
Q ss_pred CCeeccCCCceEEEEEeCCCcEEEEEEecccccccccHHHHHHHHHHHHccCCC---ceeEEEeEeccCCeEEEEEeeCC
Q 004994 445 GNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHG---NIVELIGYCNEHGQHLLVYDYGG 521 (720)
Q Consensus 445 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~---niv~l~~~~~~~~~~~lv~e~~~ 521 (720)
.+.|+.|.++.||++...+|+.++||+..... ......|..|++.++.++|. .+.+++++. ..++||||++
T Consensus 20 ~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~--~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~ 93 (288)
T 3d1u_A 20 VAERGHSHRWHLYRVELADGTPLFVKALPDDA--PALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVD 93 (288)
T ss_dssp EEEEEEETTEEEEEEEETTSCEEEEEECCTTC--CCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCC
T ss_pred eeeeCCcchhheEEEEeCCCCeEEEEecCCCC--cchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEecc
Confidence 46799999999999998889999999965321 22335789999999999875 577888764 3689999999
Q ss_pred CCCH
Q 004994 522 NCTL 525 (720)
Q Consensus 522 ~gsL 525 (720)
++.+
T Consensus 94 g~~~ 97 (288)
T 3d1u_A 94 ERPP 97 (288)
T ss_dssp CCCC
T ss_pred cCCC
Confidence 8864
No 416
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.16 E-value=6.7e-06 Score=87.07 Aligned_cols=142 Identities=18% Similarity=0.233 Sum_probs=89.2
Q ss_pred CCeeccCCCceEEEEEeCCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCc--eeEEEeEeccC-CeEEEEEeeCC
Q 004994 445 GNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGN--IVELIGYCNEH-GQHLLVYDYGG 521 (720)
Q Consensus 445 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~n--iv~l~~~~~~~-~~~~lv~e~~~ 521 (720)
.+.++.|....+|+... +|..+++|..... ..+..|..+++.+.... +.++++++... +..++||||++
T Consensus 46 i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-------~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~ 117 (362)
T 3ovc_A 46 LMQLSEGEESRAFSFDV-GGRGYVLRVNSCA-------DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQ 117 (362)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEESCC-------HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCC
T ss_pred EEECCCCCcceEEEEEE-CCcEEEEEeCCch-------hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecC
Confidence 46688899999999875 5788999987432 25788888888886533 56677776654 67899999999
Q ss_pred CCCHHHH------------------hhccchhc-------------cccCHHHH---------------------HHHHH
Q 004994 522 NCTLHDL------------------LHSDEEAH-------------KKFSWNIR---------------------IRVAL 549 (720)
Q Consensus 522 ~gsL~~~------------------l~~~~~~~-------------~~~~~~~~---------------------~~i~~ 549 (720)
+..+.++ +|...... ..-.|... .....
T Consensus 118 G~~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 197 (362)
T 3ovc_A 118 GVTLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVSASVAQ 197 (362)
T ss_dssp SEETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTHHHHHH
T ss_pred CCCcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhcccccchH
Confidence 7655321 11100000 00011111 01111
Q ss_pred HHHHHHHHHHhcC-CCCeeecCCCCCCeEEcCCCCeEEccccCCCC
Q 004994 550 GAARALQYLQEVC-EPPIVHGNFKSSNILLDEKLIVRVSDCGLAPL 594 (720)
Q Consensus 550 ~ia~~L~~LH~~~-~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~ 594 (720)
.+.+.+.++.... .+.++|+|+++.||++++++.+.|+||+.+..
T Consensus 198 ~~~~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~ 243 (362)
T 3ovc_A 198 ALDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMF 243 (362)
T ss_dssp HHHHHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCccccc
Confidence 1222223332211 24689999999999998877788999998754
No 417
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.90 E-value=5.1e-05 Score=79.45 Aligned_cols=141 Identities=18% Similarity=0.239 Sum_probs=77.8
Q ss_pred CeeccCCCceEEEEEeCCCcEEEEEEecccccccccHHHHHHHHHHHHccC--CCceeEEEe------EeccCCeEEEEE
Q 004994 446 NFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLR--HGNIVELIG------YCNEHGQHLLVY 517 (720)
Q Consensus 446 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~--H~niv~l~~------~~~~~~~~~lv~ 517 (720)
+.|+.|..+.||++...+| .+++|+.... ......|.++++.+. .-.+.+++. +....+..++||
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~------~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~ 110 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRP------EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVY 110 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECSC------HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEE
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCCC------HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEE
Confidence 3455577899999987665 4899998642 122333444444432 112333333 112456789999
Q ss_pred eeCCCCCHH--------------HHhhccchh---c-------cccCHHHHH----------------------------
Q 004994 518 DYGGNCTLH--------------DLLHSDEEA---H-------KKFSWNIRI---------------------------- 545 (720)
Q Consensus 518 e~~~~gsL~--------------~~l~~~~~~---~-------~~~~~~~~~---------------------------- 545 (720)
+|++|..+. ..+|..... . ..-.|....
T Consensus 111 ~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 190 (346)
T 2q83_A 111 DWIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQ 190 (346)
T ss_dssp ECCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHH
T ss_pred EeecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHH
Confidence 999985432 011111000 0 011232110
Q ss_pred ---HHHHHHHHHHHHHHh----------cCCCCeeecCCCCCCeEEcCCCCeEEccccCCC
Q 004994 546 ---RVALGAARALQYLQE----------VCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAP 593 (720)
Q Consensus 546 ---~i~~~ia~~L~~LH~----------~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~ 593 (720)
.+...+.+++.+|+. .....++|+|+++.|||++.++.+.|+||+.+.
T Consensus 191 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 191 EIDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 011123345666663 124689999999999999888899999999763
No 418
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=97.89 E-value=5.1e-05 Score=80.08 Aligned_cols=81 Identities=7% Similarity=-0.035 Sum_probs=54.3
Q ss_pred Cee-ccCCCceEEEEEeC-------CCcEEEEEEeccccc-ccccHHHHHHHHHHHHccC-C--CceeEEEeEeccC---
Q 004994 446 NFI-GEGLLGSVYKAELP-------GGKLLAVKKLSNTVS-QRQTDEEFLELASTISRLR-H--GNIVELIGYCNEH--- 510 (720)
Q Consensus 446 ~~l-g~G~~g~Vy~~~~~-------~g~~vavK~l~~~~~-~~~~~~~~~~e~~~l~~l~-H--~niv~l~~~~~~~--- 510 (720)
+.| +.|....+|+.... +++.+++|+...... .......+.+|+++++.+. + -.+.++++++.+.
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 457 78889999998664 267889998654320 0001134667777777774 2 3577788887665
Q ss_pred CeEEEEEeeCCCCCHH
Q 004994 511 GQHLLVYDYGGNCTLH 526 (720)
Q Consensus 511 ~~~~lv~e~~~~gsL~ 526 (720)
+..++||||+++..+.
T Consensus 106 g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 106 GTPFFLMDYVEGVVPP 121 (357)
T ss_dssp SSCEEEEECCCCBCCC
T ss_pred CCceEEEEecCCCChh
Confidence 4678999999986654
No 419
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.68 E-value=9.7e-05 Score=79.24 Aligned_cols=77 Identities=14% Similarity=0.024 Sum_probs=49.4
Q ss_pred CCeeccCCCceEEEEEeC-CCcEEEEEEeccccc--c---cccHHHHHHHHHHHHccCC--C-ceeEEEeEeccCCeEEE
Q 004994 445 GNFIGEGLLGSVYKAELP-GGKLLAVKKLSNTVS--Q---RQTDEEFLELASTISRLRH--G-NIVELIGYCNEHGQHLL 515 (720)
Q Consensus 445 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--~---~~~~~~~~~e~~~l~~l~H--~-niv~l~~~~~~~~~~~l 515 (720)
.+.+|.|.++.||++... +++.|+||....... . ......+..|.++++.+.. + .+.+++.+. .+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~d--~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD--TEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE--TTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEEc--CCccEE
Confidence 357899999999999654 468899998753221 0 1123456778888887732 3 445666553 334689
Q ss_pred EEeeCCCC
Q 004994 516 VYDYGGNC 523 (720)
Q Consensus 516 v~e~~~~g 523 (720)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999763
No 420
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.63 E-value=0.00031 Score=72.37 Aligned_cols=138 Identities=17% Similarity=0.187 Sum_probs=90.4
Q ss_pred CeeccCCCceEEEEEeCCCcEEEEEEecccccccccHHHHHHHHHHHHccC---CCceeEEEeEeccCCeEEEEEeeCCC
Q 004994 446 NFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLR---HGNIVELIGYCNEHGQHLLVYDYGGN 522 (720)
Q Consensus 446 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~---H~niv~l~~~~~~~~~~~lv~e~~~~ 522 (720)
+.|+.|....+|+... ++..+++|+.... ....+..|.+.|+.+. ...+.++++++...+..++||||+++
T Consensus 42 ~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~-----~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G 115 (312)
T 3jr1_A 42 EKLYSGEMNEIWLIND-EVQTVFVKINERS-----YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNK 115 (312)
T ss_dssp EEECCSSSSEEEEEES-SSCEEEEEEEEGG-----GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCC
T ss_pred EEeCCccceeeeEEEE-CCCeEEEEeCCcc-----cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccC
Confidence 5689999999999976 4667888987532 3567888888888873 35688899988888899999999998
Q ss_pred CCHH--------H---Hhhccch-h-------------c----cccCHHHHH---HHHH--H--------------HH-H
Q 004994 523 CTLH--------D---LLHSDEE-A-------------H----KKFSWNIRI---RVAL--G--------------AA-R 553 (720)
Q Consensus 523 gsL~--------~---~l~~~~~-~-------------~----~~~~~~~~~---~i~~--~--------------ia-~ 553 (720)
..+. + .+|.... . . -.-+|.... ++.. + +. +
T Consensus 116 ~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~ 195 (312)
T 3jr1_A 116 SKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQI 195 (312)
T ss_dssp CCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHH
T ss_pred CCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHH
Confidence 7542 1 1222110 0 0 012454321 1111 1 11 1
Q ss_pred HHHHHHh-cCCCCeeecCCCCCCeEEcCCCCeEEcccc
Q 004994 554 ALQYLQE-VCEPPIVHGNFKSSNILLDEKLIVRVSDCG 590 (720)
Q Consensus 554 ~L~~LH~-~~~~~ivHrDlkp~NiLl~~~~~~kl~DFG 590 (720)
....|.. ...+.+||+|+.+.|++++.++ +.|.||.
T Consensus 196 l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 196 VADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 1223321 2256799999999999999887 8899974
No 421
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.53 E-value=9.5e-05 Score=65.54 Aligned_cols=56 Identities=29% Similarity=0.428 Sum_probs=40.0
Q ss_pred EEeccCCccc-ccCCCCccccCcEEEecCCcCCCCCcchhhcccccccccccccccC
Q 004994 99 NIDLSNNHIG-GSIPSNLPVTVRNFSLSGNQLTGSIPESLSRLTQLLDLSLNNNHLN 154 (720)
Q Consensus 99 ~L~L~~N~l~-g~ip~~~~~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~l~~N~l~ 154 (720)
.++.++++|+ ..+|..++.+|+.|+|++|+|+...+..|..+++|+.|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFPVDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCCTTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCCcCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 5677777775 4677777778888888888888544455677777777777777664
No 422
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.40 E-value=0.00062 Score=69.35 Aligned_cols=75 Identities=20% Similarity=0.236 Sum_probs=54.2
Q ss_pred CCCeeccCCCceEEEEEeCCCcEEEEEEecccccccccHHHHHHHHHHHHccCC---CceeEEEeEeccCCeEEEEEeeC
Q 004994 444 EGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRH---GNIVELIGYCNEHGQHLLVYDYG 520 (720)
Q Consensus 444 ~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H---~niv~l~~~~~~~~~~~lv~e~~ 520 (720)
..+.+|.|..+.||+.+..||+.|++|+-.... ......|..|.+.|+.+.- --+.+++++.. .++||||+
T Consensus 19 ~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~--~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~~----~~lv~e~l 92 (288)
T 3f7w_A 19 AVAERGHSHRWHLYRVELADGTPLFVKALPDDA--PALDGLFRAEALGLDWLGRSFGSPVPQVAGWDD----RTLAMEWV 92 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEECCTTC--CCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEET----TEEEEECC
T ss_pred EEEecCCCCCeEEEEEEECCCCEEEEEEeCCCC--cchhhHHHHHHHHHHHHHhhCCCCcceEEeccC----ceEEEEee
Confidence 346789999999999999999999999875432 2223467889888888742 23555666532 37899998
Q ss_pred CCCC
Q 004994 521 GNCT 524 (720)
Q Consensus 521 ~~gs 524 (720)
+.+.
T Consensus 93 ~~~~ 96 (288)
T 3f7w_A 93 DERP 96 (288)
T ss_dssp CCCC
T ss_pred cccC
Confidence 7754
No 423
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.34 E-value=0.0008 Score=72.63 Aligned_cols=75 Identities=15% Similarity=0.128 Sum_probs=45.4
Q ss_pred CCeeccCCCceEEEEEeCCCcEEEEEEeccccc---cc----ccHHHHHHHHHHH-HccCCCceeEEEeEeccCCeEEEE
Q 004994 445 GNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVS---QR----QTDEEFLELASTI-SRLRHGNIVELIGYCNEHGQHLLV 516 (720)
Q Consensus 445 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~---~~----~~~~~~~~e~~~l-~~l~H~niv~l~~~~~~~~~~~lv 516 (720)
.+.||.|....||++.. +++.++||....... .. .....+..|+..+ ....+..+.+++.+. .+..++|
T Consensus 39 i~~l~~G~~n~vyrv~~-~~~~~vvK~~~p~~~~~~~~~~~~~~~~~~E~e~l~~~~~~~~~~vP~v~~~~--~~~~~lv 115 (420)
T 2pyw_A 39 IKEVGDGNLNFVFIVVG-SSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFD--RTMALIG 115 (420)
T ss_dssp EEECCCSSSCEEEEEEC-SSCEEEEEECCSBCTTTCTTSBCCTTHHHHHHHHHHHHHHHSGGGSCCEEEEE--TTTTEEE
T ss_pred EEEccCCCcEEEEEEEc-CCceEEEEECchhhcccCcccccchhHHHHHHHHHHHHHhhCCCCCCeEEEEC--CCccEEE
Confidence 35789999999999964 467899995332110 00 1222333333222 222335677777776 4567899
Q ss_pred EeeC-CC
Q 004994 517 YDYG-GN 522 (720)
Q Consensus 517 ~e~~-~~ 522 (720)
|||+ ++
T Consensus 116 ~e~l~~g 122 (420)
T 2pyw_A 116 MRYLEPP 122 (420)
T ss_dssp ECCCCTT
T ss_pred EeecCCc
Confidence 9999 76
No 424
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.28 E-value=0.0011 Score=68.94 Aligned_cols=142 Identities=15% Similarity=0.126 Sum_probs=73.0
Q ss_pred CeeccCCCce-EEEEEeCCCcEEEEEEecccccccccHHHHHHHHHHHHccC--CCceeEEEeEeccCCeEEEEEeeCCC
Q 004994 446 NFIGEGLLGS-VYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLR--HGNIVELIGYCNEHGQHLLVYDYGGN 522 (720)
Q Consensus 446 ~~lg~G~~g~-Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~--H~niv~l~~~~~~~~~~~lv~e~~~~ 522 (720)
+.|+.|.... +|+....+|..+++|....... +.+..|+++++.+. .-.+.+++.+..+.+ +++||++++
T Consensus 24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~-----~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~ 96 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG-----GDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGD 96 (333)
T ss_dssp CC--------CCEEEECTTCCEEEEEECCTTTT-----CCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCS
T ss_pred eECCCCCCCceEEEEEcCCCCeEEEEECCCCCC-----ccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCC
Confidence 3455555444 6787665467777876543210 12234455555553 224566777755554 689999987
Q ss_pred CCHHHHhhccch----------------------hccccCHHHHH--------------------HHHHHHHHHHHHHHh
Q 004994 523 CTLHDLLHSDEE----------------------AHKKFSWNIRI--------------------RVALGAARALQYLQE 560 (720)
Q Consensus 523 gsL~~~l~~~~~----------------------~~~~~~~~~~~--------------------~i~~~ia~~L~~LH~ 560 (720)
..+.+++..... ....++..... .....+.+.+..+..
T Consensus 97 ~~l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~ 176 (333)
T 3csv_A 97 ALFTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILS 176 (333)
T ss_dssp CBHHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHH
T ss_pred cchHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHH
Confidence 776554421100 00111111000 000111122222311
Q ss_pred ---cCCCCeeecCCCCCCeEEcCC----CCeEEccccCCCC
Q 004994 561 ---VCEPPIVHGNFKSSNILLDEK----LIVRVSDCGLAPL 594 (720)
Q Consensus 561 ---~~~~~ivHrDlkp~NiLl~~~----~~~kl~DFGla~~ 594 (720)
...+.++|+|+.+.|||++.+ ..+.|.||+.+..
T Consensus 177 ~~~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 177 AQLEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp HHCCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred hcccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 124579999999999999875 6789999998754
No 425
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.27 E-value=0.00047 Score=71.40 Aligned_cols=159 Identities=13% Similarity=0.153 Sum_probs=87.6
Q ss_pred cCHHHHHHHhcCCCCC-----CeeccCCCceEEEEEeCCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCc--eeE
Q 004994 430 FTIASLQQYTNSFSEG-----NFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGN--IVE 502 (720)
Q Consensus 430 ~~~~~~~~~~~~~~~~-----~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~n--iv~ 502 (720)
++.+++..+...|... +.|+.|....+|+....+| .+++|...... ..+.+..|+++++.+.... +.+
T Consensus 7 ~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~----~~~~l~~e~~~l~~L~~~g~~vP~ 81 (322)
T 2ppq_A 7 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRV----EKNDLPFFLGLMQHLAAKGLSCPL 81 (322)
T ss_dssp CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-------CCHHHHHHHHHHHHHHTTCCCCC
T ss_pred CCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCC----CHHHHHHHHHHHHHHHHCCCCCCc
Confidence 4556666666667653 3456688889999987666 57899886421 1123445666666653222 333
Q ss_pred EEeEe------ccCCeEEEEEeeCCCCCHHH--------------Hhhcc----chh----ccccCHHHHHH--------
Q 004994 503 LIGYC------NEHGQHLLVYDYGGNCTLHD--------------LLHSD----EEA----HKKFSWNIRIR-------- 546 (720)
Q Consensus 503 l~~~~------~~~~~~~lv~e~~~~gsL~~--------------~l~~~----~~~----~~~~~~~~~~~-------- 546 (720)
++... ...+..+++|+|++|..+.. .+|.. ... .....|.....
T Consensus 82 ~~~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~ 161 (322)
T 2ppq_A 82 PLPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADE 161 (322)
T ss_dssp BCCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGG
T ss_pred ccCCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHh
Confidence 33211 12356789999998754311 01110 000 00112332111
Q ss_pred ----HHHHHHHHHHHHHhc----CCCCeeecCCCCCCeEEcCCCCeEEccccCCC
Q 004994 547 ----VALGAARALQYLQEV----CEPPIVHGNFKSSNILLDEKLIVRVSDCGLAP 593 (720)
Q Consensus 547 ----i~~~ia~~L~~LH~~----~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~ 593 (720)
+...+.+.+.+++.. ....++|+|+++.|||++++..+.|+||+.+.
T Consensus 162 ~~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 162 VEKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp TSTTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred hhhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 011244556666543 13469999999999999987666899999763
No 426
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.16 E-value=0.003 Score=65.37 Aligned_cols=142 Identities=15% Similarity=0.155 Sum_probs=81.7
Q ss_pred CeeccCCCceEEEEEeCCCcEEEEEEecccccccccHHHHHHHHHHHHccCCC--ceeEEEeE-----eccCCeEEEEEe
Q 004994 446 NFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHG--NIVELIGY-----CNEHGQHLLVYD 518 (720)
Q Consensus 446 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~--niv~l~~~-----~~~~~~~~lv~e 518 (720)
..++ |....||++...+|+.+++|...... ...+.+..|..+++.+... .+++++.. ....+..+++|+
T Consensus 32 ~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~---~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~ 107 (328)
T 1zyl_A 32 TPLN-SYENRVYQFQDEDRRRFVVKFYRPER---WTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFP 107 (328)
T ss_dssp EEEC-CSSSEEEEECCTTCCCEEEEEECTTT---SCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEE
T ss_pred Eeec-CcccceEEEEcCCCCEEEEEEcCCCC---CCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEE
Confidence 3466 88889999987778789999986432 2344566777777776422 24444443 112456789999
Q ss_pred eCCCCCHH-----HH---------hhccch-----hccccCHHHH----HHH---------------HHHHHHHHHHHHh
Q 004994 519 YGGNCTLH-----DL---------LHSDEE-----AHKKFSWNIR----IRV---------------ALGAARALQYLQE 560 (720)
Q Consensus 519 ~~~~gsL~-----~~---------l~~~~~-----~~~~~~~~~~----~~i---------------~~~ia~~L~~LH~ 560 (720)
|++|..+. .+ +|.... ....+++... ..+ ...+.+.+..+..
T Consensus 108 ~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~ 187 (328)
T 1zyl_A 108 SVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTA 187 (328)
T ss_dssp CCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHH
T ss_pred ecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHH
Confidence 99874432 11 111000 0011222111 000 1111223333433
Q ss_pred c----CCCCeeecCCCCCCeEEcCCCCeEEccccCCC
Q 004994 561 V----CEPPIVHGNFKSSNILLDEKLIVRVSDCGLAP 593 (720)
Q Consensus 561 ~----~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~ 593 (720)
. ....++|+|+++.|||++ + .+.|+||+.+.
T Consensus 188 ~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~ 222 (328)
T 1zyl_A 188 HWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDAR 222 (328)
T ss_dssp HCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCC
T ss_pred HhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCC
Confidence 2 234689999999999999 4 89999998764
No 427
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.08 E-value=0.0047 Score=63.19 Aligned_cols=71 Identities=15% Similarity=0.085 Sum_probs=42.2
Q ss_pred CCeeccCCCceEEEEEeCCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCce-eEEEeEeccCCeEEEEEeeC-CC
Q 004994 445 GNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNI-VELIGYCNEHGQHLLVYDYG-GN 522 (720)
Q Consensus 445 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~ni-v~l~~~~~~~~~~~lv~e~~-~~ 522 (720)
.+.|+.|....+|++ ..+++|+.......... ...|.+.++.+....+ .++++++.+. -++++||+ ++
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~~~~---r~~E~~~l~~l~~~g~~P~~~~~~~~~--~~~v~e~i~~g 92 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEEYIN---RANEAVAAREAAKAGVSPEVLHVDPAT--GVMVTRYIAGA 92 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC----CCC---HHHHHHHHHHHHHTTSSCCEEEECTTT--CCEEEECCTTC
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccceeC---HHHHHHHHHHHHHcCCCCceEEEECCC--CEEEEeecCCC
Confidence 577889999999998 45888887643211111 2346666655532222 4666655433 46899999 55
Q ss_pred CCH
Q 004994 523 CTL 525 (720)
Q Consensus 523 gsL 525 (720)
-.+
T Consensus 93 ~~l 95 (301)
T 3dxq_A 93 QTM 95 (301)
T ss_dssp EEC
T ss_pred ccC
Confidence 333
No 428
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.07 E-value=9e-05 Score=70.26 Aligned_cols=62 Identities=13% Similarity=0.148 Sum_probs=29.9
Q ss_pred ccccccccccccccCCC----CCchhcCCCCCceEeccCC---cccc----cCCCCCCCCCCCceeecccccc
Q 004994 140 LTQLLDLSLNNNHLNGG----IPDAFHQFTGLINFDLSAN---NLTG----QLPPSTRNLSSLYSLHLQNNKL 201 (720)
Q Consensus 140 l~~L~~L~l~~N~l~g~----~p~~~~~l~~L~~L~ls~N---~l~g----~~p~~~~~l~~L~~L~l~~N~l 201 (720)
-+.|+.|+|++|.|+.. +-.++..-+.|++|+|++| .+.. .+-..+..-+.|..|+|+.|.+
T Consensus 97 N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 97 SPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASM 169 (197)
T ss_dssp CSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCH
T ss_pred CCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCc
Confidence 34455555555555421 2223334455666666654 2221 1223344445667777766654
No 429
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=96.95 E-value=0.0019 Score=68.90 Aligned_cols=124 Identities=15% Similarity=0.057 Sum_probs=58.2
Q ss_pred ecCceeEEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCCC-cc--ccCcEEEecCCcCCCCCcchhhccccccc
Q 004994 69 VFSNVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSN-LP--VTVRNFSLSGNQLTGSIPESLSRLTQLLD 145 (720)
Q Consensus 69 ~~~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~-~~--~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~ 145 (720)
+..+|+++.|.. +++.+-..+|.++++|+.++|.+| ++ .|+.. +. .+|+.+.+..+ +...-...|.++..+..
T Consensus 69 ~c~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~-~I~~~aF~~c~~L~~i~~p~~-l~~i~~~aF~~~~~~~~ 144 (394)
T 4fs7_A 69 GCRKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VK-MIGRCTFSGCYALKSILLPLM-LKSIGVEAFKGCDFKEI 144 (394)
T ss_dssp TCTTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CC-EECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTCCCSEE
T ss_pred CCCCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ce-EccchhhcccccchhhcccCc-eeeecceeeeccccccc
Confidence 456788888863 466555667888888888888654 43 33322 21 34444443322 11122222333222222
Q ss_pred ccccccccCCCCCchhcCCCCCceEeccCCcccccCCCCCCCCCCCceeecccc
Q 004994 146 LSLNNNHLNGGIPDAFHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNN 199 (720)
Q Consensus 146 L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N 199 (720)
....+... .-..+|.++++|+.+.+.++..+ .-...|.++.+|+.+++..|
T Consensus 145 ~~~~~~~~--i~~~aF~~c~~L~~i~l~~~~~~-I~~~~F~~c~~L~~i~l~~~ 195 (394)
T 4fs7_A 145 TIPEGVTV--IGDEAFATCESLEYVSLPDSMET-LHNGLFSGCGKLKSIKLPRN 195 (394)
T ss_dssp ECCTTCCE--ECTTTTTTCTTCCEEECCTTCCE-ECTTTTTTCTTCCBCCCCTT
T ss_pred ccCccccc--cchhhhcccCCCcEEecCCccce-eccccccCCCCceEEEcCCC
Confidence 21111111 11234555555665555544322 33344555555555555444
No 430
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=96.89 E-value=0.0012 Score=70.56 Aligned_cols=145 Identities=10% Similarity=0.180 Sum_probs=92.2
Q ss_pred eeEEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCC-Ccc--ccCcEEEecCCcCCCCCcchhhccccccccccc
Q 004994 73 VTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPS-NLP--VTVRNFSLSGNQLTGSIPESLSRLTQLLDLSLN 149 (720)
Q Consensus 73 l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~-~~~--~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~l~ 149 (720)
+..+.+. +.+...-..+|.++.+|+.+.+.++..+ |.. .+. .+|+.+.+. +.++..-...|.+|.+|+.++|.
T Consensus 244 ~~~~~ip-~~v~~i~~~aF~~c~~L~~i~lp~~~~~--I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp 319 (394)
T 4gt6_A 244 DPAFKIP-NGVARIETHAFDSCAYLASVKMPDSVVS--IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIP 319 (394)
T ss_dssp CSEEECC-TTEEEECTTTTTTCSSCCEEECCTTCCE--ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECC
T ss_pred cceEEcC-CcceEcccceeeecccccEEecccccce--ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeC
Confidence 3344443 3444445567889999999999776543 333 332 679999996 45664555678999999999998
Q ss_pred ccccCCCCCchhcCCCCCceEeccCCcccccCCCCCCCCCCCceeeccccccccccccccccccceEEccCCcCc
Q 004994 150 NNHLNGGIPDAFHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNNKLSGTLNVLEDLHLIDLNIENNLFS 224 (720)
Q Consensus 150 ~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~l~l~~N~l~ 224 (720)
.| ++..-..+|.+|.+|+.+.|..+ ++..-..+|.+|.+|+.+++.+|..... .......|+.+.+..|.+.
T Consensus 320 ~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~~~-~~~~~~~L~~i~i~~~~~~ 391 (394)
T 4gt6_A 320 EG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQWN-AISTDSGLQNLPVAPGSID 391 (394)
T ss_dssp TT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHHHH-TCBCCCCC-----------
T ss_pred Cc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceeehh-hhhccCCCCEEEeCCCCEE
Confidence 65 55344568999999999999755 6633356799999999999998864321 1222334777777666543
No 431
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=96.75 E-value=0.0025 Score=68.06 Aligned_cols=104 Identities=9% Similarity=0.136 Sum_probs=78.6
Q ss_pred ccCcEEEecCCcCCCCCcchhhcccccccccccccccCCCCCchhcCCCCCceEeccCCcccccCCCCCCCCCCCceeec
Q 004994 117 VTVRNFSLSGNQLTGSIPESLSRLTQLLDLSLNNNHLNGGIPDAFHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHL 196 (720)
Q Consensus 117 ~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l 196 (720)
.+|+.+.+.++..+ .-...|.++++|+.+.+. +.++..-..+|.++.+|+.++|..| ++..-..+|.+|.+|+.+.|
T Consensus 265 ~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~i 341 (394)
T 4gt6_A 265 AYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAI 341 (394)
T ss_dssp SSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEE
T ss_pred ccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEE
Confidence 57899999877654 556678999999999996 4555444567999999999999865 66344668999999999999
Q ss_pred ccccccccc-cccccc-ccceEEccCCcCc
Q 004994 197 QNNKLSGTL-NVLEDL-HLIDLNIENNLFS 224 (720)
Q Consensus 197 ~~N~l~~~~-~~~~~~-~l~~l~l~~N~l~ 224 (720)
..+ ++..- ..+.+. .|+.+++.+|...
T Consensus 342 p~s-v~~I~~~aF~~C~~L~~i~~~~~~~~ 370 (394)
T 4gt6_A 342 PSS-VTKIPESAFSNCTALNNIEYSGSRSQ 370 (394)
T ss_dssp CTT-CCBCCGGGGTTCTTCCEEEESSCHHH
T ss_pred Ccc-cCEEhHhHhhCCCCCCEEEECCceee
Confidence 755 55443 345554 4999999987654
No 432
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.75 E-value=0.0028 Score=68.46 Aligned_cols=70 Identities=13% Similarity=0.139 Sum_probs=48.1
Q ss_pred CeeccCCCceEEEEEeCC--------CcEEEEEEecccccccccHHHHHHHHHHHHccCCCc-eeEEEeEeccCCeEEEE
Q 004994 446 NFIGEGLLGSVYKAELPG--------GKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGN-IVELIGYCNEHGQHLLV 516 (720)
Q Consensus 446 ~~lg~G~~g~Vy~~~~~~--------g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~n-iv~l~~~~~~~~~~~lv 516 (720)
+.|+.|....+|++...+ ++.+++|+.... ...+.+..|..+++.+...+ ..++++.+.+ .+|
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~----~~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v 150 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP----ETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRL 150 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC----CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEE
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC----CcHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEE
Confidence 567888889999998753 578999987431 11134557888888774333 3677777653 289
Q ss_pred EeeCCCC
Q 004994 517 YDYGGNC 523 (720)
Q Consensus 517 ~e~~~~g 523 (720)
|||+++-
T Consensus 151 ~e~l~G~ 157 (429)
T 1nw1_A 151 EEYIPSR 157 (429)
T ss_dssp ECCCCEE
T ss_pred EEEeCCc
Confidence 9999863
No 433
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.75 E-value=0.0045 Score=65.38 Aligned_cols=141 Identities=16% Similarity=0.150 Sum_probs=80.7
Q ss_pred CeeccCCCceEEEEEeC--------CCcEEEEEEecccccccccHHHHHHHHHHHHccC-CCceeEEEeEeccCCeEEEE
Q 004994 446 NFIGEGLLGSVYKAELP--------GGKLLAVKKLSNTVSQRQTDEEFLELASTISRLR-HGNIVELIGYCNEHGQHLLV 516 (720)
Q Consensus 446 ~~lg~G~~g~Vy~~~~~--------~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~~~~~~~~~~~lv 516 (720)
+.|..|-...+|++... +++.|++|+.... ........+|.++++.+. +.-..++++++.+. +|
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~---~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~g----~v 128 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI---LQGVDSLVLESVMFAILAERSLGPQLYGVFPEG----RL 128 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC------CCHHHHHHHHHHHHHHHHTTSSCCEEEEETTE----EE
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc---cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCCc----cE
Confidence 56777888999999764 2478999986332 123455668888887773 33346677777652 99
Q ss_pred EeeCCCCCHHHH-----------------hhccc-hhccccC--HHHHHHHHHHHH-------------------HHHHH
Q 004994 517 YDYGGNCTLHDL-----------------LHSDE-EAHKKFS--WNIRIRVALGAA-------------------RALQY 557 (720)
Q Consensus 517 ~e~~~~gsL~~~-----------------l~~~~-~~~~~~~--~~~~~~i~~~ia-------------------~~L~~ 557 (720)
|||+++..+..- +|... ...+... |.+..++..++. +.+..
T Consensus 129 ~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 208 (379)
T 3feg_A 129 EQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGN 208 (379)
T ss_dssp EECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHH
T ss_pred EEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHH
Confidence 999987544210 11110 0011122 333333333221 12333
Q ss_pred HHh----c-CCCCeeecCCCCCCeEEcCC----CCeEEccccCCC
Q 004994 558 LQE----V-CEPPIVHGNFKSSNILLDEK----LIVRVSDCGLAP 593 (720)
Q Consensus 558 LH~----~-~~~~ivHrDlkp~NiLl~~~----~~~kl~DFGla~ 593 (720)
|.. . ....++|+|+.+.||+++.+ +.+.++||..|.
T Consensus 209 L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~ 253 (379)
T 3feg_A 209 LRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS 253 (379)
T ss_dssp HHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred HHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence 322 1 23368999999999999876 789999998774
No 434
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=96.73 E-value=0.0035 Score=66.83 Aligned_cols=158 Identities=14% Similarity=0.152 Sum_probs=102.4
Q ss_pred CceeEEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCCCcc--ccCcEEEecCCcCCCCCcchhhcccccccccc
Q 004994 71 SNVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSNLP--VTVRNFSLSGNQLTGSIPESLSRLTQLLDLSL 148 (720)
Q Consensus 71 ~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~--~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~l 148 (720)
.+|+.+.+.. .++..-...+..+..|+.+.+..|... .-...+. ..++.+.+..+.+. ...|..+.+|+.+.+
T Consensus 230 ~~l~~i~ip~-~~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l 304 (394)
T 4fs7_A 230 TGVKNIIIPD-SFTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKL 304 (394)
T ss_dssp CCCCEEEECT-TCCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEE
T ss_pred CCCceEEECC-CceecccccccccccceeEEcCCCcce-eeccccccccccceeccCceeec---ccccccccccccccc
Confidence 4677777764 344444567888899999999877554 2222332 56777777766533 345778888888888
Q ss_pred cccccCCCCCchhcCCCCCceEeccCCcccccCCCCCCCCCCCceeecccccccccc-cccccc-ccceEEccCCcCccc
Q 004994 149 NNNHLNGGIPDAFHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNNKLSGTL-NVLEDL-HLIDLNIENNLFSGP 226 (720)
Q Consensus 149 ~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~-~~~~~~-~l~~l~l~~N~l~g~ 226 (720)
.+| ++..-..+|.++.+|+.++|.++ ++..-..+|.+|.+|+.++|..| ++..- ..+.+. .|+.+++..| ++ .
T Consensus 305 ~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~-~~-~ 379 (394)
T 4fs7_A 305 LDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR-LE-Q 379 (394)
T ss_dssp CTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG-GG-G
T ss_pred ccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC-CE-E
Confidence 765 55344567888899999988754 66344567888899999988776 55433 345554 4888888654 22 2
Q ss_pred CCcccCCCcccc
Q 004994 227 IPEKLLSIPNFR 238 (720)
Q Consensus 227 ~p~~~~~l~~l~ 238 (720)
+...|.+.++|+
T Consensus 380 ~~~~F~~c~~L~ 391 (394)
T 4fs7_A 380 YRYDFEDTTKFK 391 (394)
T ss_dssp GGGGBCTTCEEE
T ss_pred hhheecCCCCCc
Confidence 233454444443
No 435
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.73 E-value=0.0015 Score=57.62 Aligned_cols=56 Identities=27% Similarity=0.337 Sum_probs=36.1
Q ss_pred cccccccccC-CCCCchhcCCCCCceEeccCCcccccCCCCCCCCCCCceeeccccccc
Q 004994 145 DLSLNNNHLN-GGIPDAFHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNNKLS 202 (720)
Q Consensus 145 ~L~l~~N~l~-g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~ 202 (720)
.++.+++.|+ ..+|..+. .+|+.|+|++|+|+..-+..|..+++|+.|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 4566666664 24454322 35777888888887444445677788888888888764
No 436
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=96.72 E-value=0.00024 Score=66.04 Aligned_cols=83 Identities=11% Similarity=0.196 Sum_probs=49.2
Q ss_pred cCcEEEecCCcCCCCCcchhhcccccccccccccc-cCCCCCchhcCC----CCCceEeccCCc-ccccCCCCCCCCCCC
Q 004994 118 TVRNFSLSGNQLTGSIPESLSRLTQLLDLSLNNNH-LNGGIPDAFHQF----TGLINFDLSANN-LTGQLPPSTRNLSSL 191 (720)
Q Consensus 118 ~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~l~~N~-l~g~~p~~~~~l----~~L~~L~ls~N~-l~g~~p~~~~~l~~L 191 (720)
+|+.|||+++.++..--..+.++++|+.|+|+++. ++..-=..++.+ ++|++|+|+++. +|..-=..+..+++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 45555555555543333446677788888888774 543211224443 368888888764 653211235667888
Q ss_pred ceeeccccc
Q 004994 192 YSLHLQNNK 200 (720)
Q Consensus 192 ~~L~l~~N~ 200 (720)
+.|+|++..
T Consensus 142 ~~L~L~~c~ 150 (176)
T 3e4g_A 142 KYLFLSDLP 150 (176)
T ss_dssp CEEEEESCT
T ss_pred CEEECCCCC
Confidence 888888764
No 437
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.68 E-value=0.00016 Score=68.63 Aligned_cols=87 Identities=20% Similarity=0.255 Sum_probs=46.2
Q ss_pred hcccccccccccccccCC----CCCchhcCCCCCceEeccCCcccc----cCCCCCCCCCCCceeecccc---ccccc--
Q 004994 138 SRLTQLLDLSLNNNHLNG----GIPDAFHQFTGLINFDLSANNLTG----QLPPSTRNLSSLYSLHLQNN---KLSGT-- 204 (720)
Q Consensus 138 ~~l~~L~~L~l~~N~l~g----~~p~~~~~l~~L~~L~ls~N~l~g----~~p~~~~~l~~L~~L~l~~N---~l~~~-- 204 (720)
..-+.|+.|+|++|+|.. .+-..+..-+.|+.|+|++|.|+. .+-..+..-+.|+.|+|++| .+...
T Consensus 67 ~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~~~~~ig~~g~ 146 (197)
T 1pgv_A 67 CNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQVE 146 (197)
T ss_dssp TTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHHH
T ss_pred hhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCCcCcCcCHHHH
Confidence 333455555555555542 233344455677777777777763 13334455556777777754 33211
Q ss_pred --c-ccc-cccccceEEccCCcCc
Q 004994 205 --L-NVL-EDLHLIDLNIENNLFS 224 (720)
Q Consensus 205 --~-~~~-~~~~l~~l~l~~N~l~ 224 (720)
+ ..+ .+..|..|+++.|.+.
T Consensus 147 ~~ia~aL~~N~tL~~L~l~~~~~g 170 (197)
T 1pgv_A 147 MDMMMAIEENESLLRVGISFASME 170 (197)
T ss_dssp HHHHHHHHHCSSCCEEECCCCCHH
T ss_pred HHHHHHHHhCCCcCeEeccCCCcc
Confidence 1 112 2334777777766543
No 438
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=96.67 E-value=0.0037 Score=66.21 Aligned_cols=129 Identities=12% Similarity=0.091 Sum_probs=80.3
Q ss_pred cCCcCcCCCCCccEEeccCCcccccCCC-Ccc--ccCcEEEecCCcCCCCCcchhhcccccccccccccccCCCCCchhc
Q 004994 86 VLADTLGDLESVINIDLSNNHIGGSIPS-NLP--VTVRNFSLSGNQLTGSIPESLSRLTQLLDLSLNNNHLNGGIPDAFH 162 (720)
Q Consensus 86 ~~~~~~~~l~~L~~L~L~~N~l~g~ip~-~~~--~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~l~~N~l~g~~p~~~~ 162 (720)
.....+....+|+.+.+..+ +. .+.. .+. .+|+.+.+..+ ++..-...|.++.+|+.+.+..+ +...-..+|.
T Consensus 208 i~~~~f~~~~~l~~i~~~~~-~~-~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~ 283 (379)
T 4h09_A 208 VTAYGFSYGKNLKKITITSG-VT-TLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCS 283 (379)
T ss_dssp ECTTTTTTCSSCSEEECCTT-CC-EECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTT
T ss_pred Eeecccccccccceeeeccc-ee-EEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccc
Confidence 34456667777888877654 33 2322 222 56788888765 54344556777888888877654 4433345678
Q ss_pred CCCCCceEeccCCcccccCCCCCCCCCCCceeecccccccccc-cccccc-ccceEEcc
Q 004994 163 QFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNNKLSGTL-NVLEDL-HLIDLNIE 219 (720)
Q Consensus 163 ~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~-~~~~~~-~l~~l~l~ 219 (720)
++.+|+.+.+.+|.++..-..+|.++.+|+.+.|..+ ++..- ..+.+. .|+.+.+.
T Consensus 284 ~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip 341 (379)
T 4h09_A 284 GCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYP 341 (379)
T ss_dssp TCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCC
T ss_pred cccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEEC
Confidence 8888888888888777444567788888888888654 44332 234443 36665543
No 439
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.62 E-value=0.0092 Score=64.75 Aligned_cols=72 Identities=8% Similarity=0.039 Sum_probs=46.0
Q ss_pred CeeccCCCceEEEEEeCC-CcEEEEEEecccccccccHHHHHHHHHHHHccCCCce-eEEEeEeccCCeEEEEEeeCCCC
Q 004994 446 NFIGEGLLGSVYKAELPG-GKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNI-VELIGYCNEHGQHLLVYDYGGNC 523 (720)
Q Consensus 446 ~~lg~G~~g~Vy~~~~~~-g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~ni-v~l~~~~~~~~~~~lv~e~~~~g 523 (720)
+.|+.|-...+|++...+ +..+++|+.......... -..|..+++.+...++ .++++++.. .+||||+++-
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~id---R~~E~~vl~~L~~~gl~P~ll~~~~~----G~v~e~I~G~ 186 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEIIN---REREKKISCILYNKNIAKKIYVFFTN----GRIEEFMDGY 186 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC-CCSCSC---HHHHHHHHHHHTTSSSBCCEEEEETT----EEEEECCCSE
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCChhhhcC---HHHHHHHHHHHHhcCCCCCEEEEeCC----eEEEEeeCCc
Confidence 567888889999998765 578889987543211111 1467778887754444 567777742 2599999874
Q ss_pred C
Q 004994 524 T 524 (720)
Q Consensus 524 s 524 (720)
.
T Consensus 187 ~ 187 (458)
T 2qg7_A 187 A 187 (458)
T ss_dssp E
T ss_pred c
Confidence 3
No 440
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=96.60 E-value=0.00062 Score=63.22 Aligned_cols=37 Identities=24% Similarity=0.269 Sum_probs=27.3
Q ss_pred ceeEEEecCCcccccCCcCcCCCCCccEEeccCCc-cc
Q 004994 72 NVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNH-IG 108 (720)
Q Consensus 72 ~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~-l~ 108 (720)
+|++|||+++.++..--..+..+++|+.|+|+++. |+
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~It 99 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIE 99 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccC
Confidence 68889998888765433456778888888888774 55
No 441
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=96.32 E-value=0.006 Score=64.56 Aligned_cols=126 Identities=15% Similarity=0.167 Sum_probs=95.0
Q ss_pred ecCceeEEEecCCcccccCCcCcCCCCCccEEeccCCcccccCCCC-cc--ccCcEEEecCCcCCCCCcchhhccccccc
Q 004994 69 VFSNVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSN-LP--VTVRNFSLSGNQLTGSIPESLSRLTQLLD 145 (720)
Q Consensus 69 ~~~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~-~~--~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~ 145 (720)
...+++.+.+..+ +...-...+.++..|+.+.+..+ ++ .|... +. .+|+.+.+..+ ++..-...|.+|++|+.
T Consensus 215 ~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~-~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~ 290 (379)
T 4h09_A 215 YGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VT-SIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTK 290 (379)
T ss_dssp TCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CC-EECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCE
T ss_pred cccccceeeeccc-eeEEccccccCCccceEEEcCCC-cc-EeCccccceeehhcccccccc-ceecccccccccccccc
Confidence 3456777877644 55455678889999999999876 54 44433 32 57999999755 55344567899999999
Q ss_pred ccccccccCCCCCchhcCCCCCceEeccCCcccccCCCCCCCCCCCceeecccc
Q 004994 146 LSLNNNHLNGGIPDAFHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNN 199 (720)
Q Consensus 146 L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N 199 (720)
+.+.+|.++..-..+|.++.+|+.+.|.++ ++..-..+|.+|.+|+.+.+..|
T Consensus 291 i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~ 343 (379)
T 4h09_A 291 VVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS 343 (379)
T ss_dssp EEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT
T ss_pred ccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc
Confidence 999999888555678999999999999765 66344567999999999998655
No 442
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.27 E-value=0.016 Score=61.05 Aligned_cols=72 Identities=10% Similarity=0.050 Sum_probs=41.6
Q ss_pred CeeccCCCceEEEEEeCC---------CcEEEEEEecccccccccHHHHHHHHHHHHccCCCc-eeEEEeEeccCCeEEE
Q 004994 446 NFIGEGLLGSVYKAELPG---------GKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGN-IVELIGYCNEHGQHLL 515 (720)
Q Consensus 446 ~~lg~G~~g~Vy~~~~~~---------g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~n-iv~l~~~~~~~~~~~l 515 (720)
+.++.|....+|++...+ ++.+++|+......... ....|.++++.+...+ +.++++... -++
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~~~---~~~~E~~~l~~L~~~g~~P~~~~~~~----~~~ 111 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDELY---NTISEFEVYKTMSKYKIAPQLLNTFN----GGR 111 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGGTS---CHHHHHHHHHHHHHTTSSCCEEEEET----TEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCcccee---cHHHHHHHHHHHHhcCCCCceEEecC----CcE
Confidence 457778888999997654 26888888754321111 1245666666663223 446666542 268
Q ss_pred EEeeCCCCC
Q 004994 516 VYDYGGNCT 524 (720)
Q Consensus 516 v~e~~~~gs 524 (720)
||||+++..
T Consensus 112 v~e~i~G~~ 120 (369)
T 3c5i_A 112 IEEWLYGDP 120 (369)
T ss_dssp EEECCCSEE
T ss_pred EEEEecCCc
Confidence 999998743
No 443
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.18 E-value=0.018 Score=59.94 Aligned_cols=31 Identities=16% Similarity=0.275 Sum_probs=27.3
Q ss_pred CCeeecCCCCCCeEEcCCCCeEEccccCCCC
Q 004994 564 PPIVHGNFKSSNILLDEKLIVRVSDCGLAPL 594 (720)
Q Consensus 564 ~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~ 594 (720)
..++|+|+.+.||++++++.+.|.||+.+..
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 4699999999999999888899999987643
No 444
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=95.95 E-value=0.043 Score=52.21 Aligned_cols=100 Identities=13% Similarity=0.082 Sum_probs=64.6
Q ss_pred CCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCCCCCCCCCcc
Q 004994 523 CTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNE 602 (720)
Q Consensus 523 gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~~ 602 (720)
-+|.++|.. ...+++..+...++.|.+++|.-+-.... + ..+=+-|..|++..+|.|...+ +.+.
T Consensus 33 vSL~eIL~~---~~~PlsEEqaWALc~Qc~~~L~~~~~~~~-~-~~~i~~~~~i~l~~dG~V~f~~-~~s~--------- 97 (229)
T 2yle_A 33 LSLEEILRL---YNQPINEEQAWAVCYQCCGSLRAAARRRQ-P-RHRVRSAAQIRVWRDGAVTLAP-AADD--------- 97 (229)
T ss_dssp EEHHHHHHH---HTSCCCHHHHHHHHHHHHHHHHHHHHTTC-C-CCCCCSGGGEEEETTSCEEECC-C------------
T ss_pred ccHHHHHHH---cCCCcCHHHHHHHHHHHHHHHHhhhhccc-C-CceecCCcceEEecCCceeccc-cccc---------
Confidence 378888863 45789999999999999888766522101 1 1223346899999999988764 2110
Q ss_pred cccCccccccCCCCccCCCCCCCccchHhHHHHHHHHHhC
Q 004994 603 LSEGLLTAHGSGAPEFESGSYSCQSDVYSLGVVMLELLTG 642 (720)
Q Consensus 603 ~~~~~~~~~~~~aPE~~~~~~~~~~Dv~S~Gvvl~elltG 642 (720)
.....+.+||......+.+.=|||+|+++|.-+--
T Consensus 98 -----~~~~~~~~pe~~~~~~te~~~IysLG~tLY~ALDy 132 (229)
T 2yle_A 98 -----AGEPPPVAGKLGYSQCMETEVIESLGIIIYKALDY 132 (229)
T ss_dssp --------------CCSSSSSCHHHHHHHHHHHHHHHHTT
T ss_pred -----ccccCCCChhhccccchHHHHHHHHHHHHHHHhhc
Confidence 01123557887655567889999999999998853
No 445
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.68 E-value=0.03 Score=59.32 Aligned_cols=144 Identities=15% Similarity=0.183 Sum_probs=80.3
Q ss_pred CeeccCCCceEEEEEeCC--------CcEEEEEEecccccc---------cccH-------HHHHHHHHHHHccC-CCce
Q 004994 446 NFIGEGLLGSVYKAELPG--------GKLLAVKKLSNTVSQ---------RQTD-------EEFLELASTISRLR-HGNI 500 (720)
Q Consensus 446 ~~lg~G~~g~Vy~~~~~~--------g~~vavK~l~~~~~~---------~~~~-------~~~~~e~~~l~~l~-H~ni 500 (720)
+.|..|-...+|++...+ ++.|.+++.-..... ...+ +....|.++++.+. |--.
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 456678888999997754 367888886432110 0111 12234777777774 4445
Q ss_pred eEEEeEeccCCeEEEEEeeCCCCCHH--HH---------------hhccc-hhccccC--HHHHHHHHHHHH--------
Q 004994 501 VELIGYCNEHGQHLLVYDYGGNCTLH--DL---------------LHSDE-EAHKKFS--WNIRIRVALGAA-------- 552 (720)
Q Consensus 501 v~l~~~~~~~~~~~lv~e~~~~gsL~--~~---------------l~~~~-~~~~~~~--~~~~~~i~~~ia-------- 552 (720)
.++++++.++ +|+||+++-.|. ++ +|... ....... |....++..++.
T Consensus 138 Pkl~~~~~~G----~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~ 213 (401)
T 3f2s_A 138 PKLYGIFPQG----RLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEES 213 (401)
T ss_dssp CCEEEEETTE----EEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHH
T ss_pred CeEEEEeCCC----eEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchh
Confidence 6778877543 899999864332 11 11110 0011222 223222322211
Q ss_pred --------------HHH----HHHHhc-CCCCeeecCCCCCCeEEcCC------CCeEEccccCCC
Q 004994 553 --------------RAL----QYLQEV-CEPPIVHGNFKSSNILLDEK------LIVRVSDCGLAP 593 (720)
Q Consensus 553 --------------~~L----~~LH~~-~~~~ivHrDlkp~NiLl~~~------~~~kl~DFGla~ 593 (720)
+-+ .+|... ....++|+|+.+.|||++++ +.+.++||..|.
T Consensus 214 ~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 214 RIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 112 223222 23358999999999999887 789999998763
No 446
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=94.37 E-value=0.33 Score=51.78 Aligned_cols=72 Identities=10% Similarity=0.006 Sum_probs=45.2
Q ss_pred CeeccCCCceEEEEEeCC--------CcEEEEEEecccccccccHHHHHHHHHHHHccC-CCceeEEEeEeccCCeEEEE
Q 004994 446 NFIGEGLLGSVYKAELPG--------GKLLAVKKLSNTVSQRQTDEEFLELASTISRLR-HGNIVELIGYCNEHGQHLLV 516 (720)
Q Consensus 446 ~~lg~G~~g~Vy~~~~~~--------g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~~~~~~~~~~~lv 516 (720)
+.+..|-...+|+....+ ++.|++|+.........+ -.+|.++++.+. +.-..++++.+.. ++|
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~~id---R~~E~~~l~~L~~~gi~P~l~~~~~~----~~I 148 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGKFYD---SKVELDVFRYLSNINIAPNIIADFPE----GRI 148 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-CCCC---HHHHHHHHHHHHHTTSSCCEEEEETT----EEE
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcchhcC---HHHHHHHHHHHHhcCCCCCEEEEcCC----CEE
Confidence 457778889999997753 578999986543211112 235666666653 2224566665432 689
Q ss_pred EeeCCCCC
Q 004994 517 YDYGGNCT 524 (720)
Q Consensus 517 ~e~~~~gs 524 (720)
|||+++..
T Consensus 149 ~efI~G~~ 156 (424)
T 3mes_A 149 EEFIDGEP 156 (424)
T ss_dssp EECCCSEE
T ss_pred EEEeCCcc
Confidence 99999854
No 447
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=89.79 E-value=0.57 Score=31.85 Aligned_cols=24 Identities=8% Similarity=0.184 Sum_probs=9.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcc
Q 004994 302 SAAAILCALGCSLFMWRYCKTRRV 325 (720)
Q Consensus 302 i~~~~~~~l~~~~~~~~~~~~r~~ 325 (720)
+++++++++++++..|++.|+|++
T Consensus 16 VVgGv~~v~ii~~~~~~~~RRRr~ 39 (44)
T 2l2t_A 16 VIGGLFILVIVGLTFAVYVRRKSI 39 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred ehHHHHHHHHHHHHHHHHhhhhhh
Confidence 333333333333344444544433
No 448
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=87.90 E-value=0.56 Score=31.97 Aligned_cols=12 Identities=17% Similarity=0.229 Sum_probs=5.2
Q ss_pred HHHHHHHHHhhc
Q 004994 313 SLFMWRYCKTRR 324 (720)
Q Consensus 313 ~~~~~~~~~~r~ 324 (720)
++.+|++.|+|+
T Consensus 28 ~~~~~~~~RRr~ 39 (44)
T 2ks1_B 28 ALGIGLFMRRRH 39 (44)
T ss_dssp HHHHHHHHHTTT
T ss_pred HHHHHHHhhhhH
Confidence 333344444443
No 449
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=87.33 E-value=1.8 Score=45.81 Aligned_cols=28 Identities=29% Similarity=0.418 Sum_probs=23.9
Q ss_pred eeecCCCCCCeEE------cCCCCeEEccccCCC
Q 004994 566 IVHGNFKSSNILL------DEKLIVRVSDCGLAP 593 (720)
Q Consensus 566 ivHrDlkp~NiLl------~~~~~~kl~DFGla~ 593 (720)
++|+|+.+.|||+ +++..++++||-.|.
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~ 279 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhcc
Confidence 5799999999999 456779999998874
No 450
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=86.09 E-value=0.95 Score=42.94 Aligned_cols=116 Identities=11% Similarity=0.139 Sum_probs=78.7
Q ss_pred cCCCceeEEEeEeccCCeEEEEEeeCCCC-CHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCC
Q 004994 495 LRHGNIVELIGYCNEHGQHLLVYDYGGNC-TLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKS 573 (720)
Q Consensus 495 l~H~niv~l~~~~~~~~~~~lv~e~~~~g-sL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDlkp 573 (720)
..||+.+.. .+-.+.+.+.+.|+.-+.+ ++.. -+.++...+++++..++....+++. -+|--|.|
T Consensus 42 ~~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~--------ik~~~~~eKlr~l~ni~~l~~~~~~-----r~tf~L~P 107 (215)
T 4ann_A 42 QHSPYFIDA-ELTELRDSFQIHYDINDNHTPFDN--------IKSFTKNEKLRYLLNIKNLEEVNRT-----RYTFVLAP 107 (215)
T ss_dssp SCCTTBCCE-EEEECSSEEEEEECCCTTSEEGGG--------GGGSCHHHHHHHHHHGGGGGGGGGS-----SEECCCSG
T ss_pred ccCCcccce-EEEEcccEEEEEEEcCcccCCHHH--------HHhcCHHHHHHHHHHHHHHHHHhcC-----ceEEEEec
Confidence 368988876 4555666666666654422 2221 3456778899999998887766554 37889999
Q ss_pred CCeEEcCCCCeEEccccCCCCCCCCCCcccccCccccccCCCCccCCCCCCCccchHhHHHHHHHHHhCCCCCC
Q 004994 574 SNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFESGSYSCQSDVYSLGVVMLELLTGRKPYD 647 (720)
Q Consensus 574 ~NiLl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~Dv~S~Gvvl~elltG~~Pf~ 647 (720)
+||++|.++.+++.-.|+-..+. |. ..+...=+-.+=+++..+++++..|+
T Consensus 108 ~NL~f~~~~~p~i~~RGik~~l~-------------------P~----~~~ee~fL~qyKAliiall~~K~~Fe 158 (215)
T 4ann_A 108 DELFFTRDGLPIAKTRGLQNVVD-------------------PL----PVSEAEFLTRYKALVICAFNEKQSFD 158 (215)
T ss_dssp GGEEECTTSCEEESCCEETTTBS-------------------CC----CCCHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred ceEEEcCCCCEEEEEccCccCCC-------------------CC----CCCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 99999999999999888754332 21 11212223346678888999998884
No 451
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=84.67 E-value=1.9 Score=41.03 Aligned_cols=114 Identities=14% Similarity=0.128 Sum_probs=74.2
Q ss_pred CCCceeEEEeEeccCCeEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHH-HHHhcCCCCeeecCCCCC
Q 004994 496 RHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQ-YLQEVCEPPIVHGNFKSS 574 (720)
Q Consensus 496 ~H~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~-~LH~~~~~~ivHrDlkp~ 574 (720)
.||++ -...-.+.+.+.+.|+.-+++.=...+ +.++...+++++..++.... +++ .-+|--+.|+
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i-------~~~~~~eKlrll~nl~~L~~~~~~-----~r~tf~l~P~ 113 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAI-------RKTTLLSRIRAAIHLVSKVKHHSA-----RRLIFIVCPE 113 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHH-------HTSCHHHHHHHHHHHHHHHSSCCS-----SSEECCCCGG
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHH-------HhcCHHHHHHHHHHHHHHHHHhhh-----CceeEEEeCc
Confidence 68888 333446667777777765443222222 34667788888888776555 443 4588899999
Q ss_pred CeEEcCCCCeEEccccCCCCCCCCCCcccccCccccccCCCCccCCCCCCCccc-hHhHHHHHHHHHhCCCCCC
Q 004994 575 NILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFESGSYSCQSD-VYSLGVVMLELLTGRKPYD 647 (720)
Q Consensus 575 NiLl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~D-v~S~Gvvl~elltG~~Pf~ 647 (720)
||++|.++.+++.-.|+-..+ +|.- .+ ..| +-.+=+++..++.++..|+
T Consensus 114 NL~f~~~~~p~i~hRGi~~~l-------------------pP~e----~~-ee~fl~qyKali~all~~K~~Fe 163 (219)
T 4ano_A 114 NLMFNRALEPFFLHVGVKESL-------------------PPDE----WD-DERLLREVKATVLALTEGEYRFD 163 (219)
T ss_dssp GEEECTTCCEEESCCEETTTB-------------------SSCS----CC-HHHHHHHHHHHHHHHTTCSSCHH
T ss_pred eEEEeCCCcEEEEEcCCcccC-------------------CCCC----CC-HHHHHHHHHHHHHHHHcCCCCHH
Confidence 999999999999988875433 2211 11 122 2245677778888887774
No 452
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=84.56 E-value=2.2 Score=28.92 Aligned_cols=6 Identities=33% Similarity=0.451 Sum_probs=2.6
Q ss_pred HHHhhc
Q 004994 319 YCKTRR 324 (720)
Q Consensus 319 ~~~~r~ 324 (720)
|.|||+
T Consensus 34 ~~RRR~ 39 (44)
T 2jwa_A 34 LIKRRQ 39 (44)
T ss_dssp HHHHHC
T ss_pred heehhh
Confidence 444443
No 453
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=83.99 E-value=0.11 Score=56.24 Aligned_cols=60 Identities=3% Similarity=-0.038 Sum_probs=16.0
Q ss_pred CCeeccCCCceEEEEEeCC-CcEEEE------EEecccccccccHHHHHHHHHHHHccCCCceeEEEeEe
Q 004994 445 GNFIGEGLLGSVYKAELPG-GKLLAV------KKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYC 507 (720)
Q Consensus 445 ~~~lg~G~~g~Vy~~~~~~-g~~vav------K~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~ 507 (720)
.+.+| ||+||+|.+.. ...||| |..+...........|.+|..+++.++|||+++.+++.
T Consensus 147 ~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~ 213 (463)
T 3cxl_A 147 YEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFK 213 (463)
T ss_dssp TTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEE
T ss_pred cccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceE
Confidence 35565 99999997754 467888 77664433344456788899999999999999987764
No 454
>2jo1_A Phospholemman; FXYD1, Na,K-ATPase, micelle, hydrolase regulator; NMR {Homo sapiens}
Probab=58.05 E-value=24 Score=26.23 Aligned_cols=25 Identities=32% Similarity=0.505 Sum_probs=14.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh
Q 004994 299 VALSAAAILCALGCSLFMWRYCKTR 323 (720)
Q Consensus 299 v~~i~~~~~~~l~~~~~~~~~~~~r 323 (720)
.+++++++++++++++++...|+.+
T Consensus 19 GGLifA~vLfi~GI~iilS~KckCk 43 (72)
T 2jo1_A 19 GGLVIAGILFILGILIVLSRRCRCK 43 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHcCccccC
Confidence 4555556666666666665545444
No 455
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=57.38 E-value=26 Score=24.83 Aligned_cols=23 Identities=17% Similarity=0.311 Sum_probs=11.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 004994 297 IWVALSAAAILCALGCSLFMWRY 319 (720)
Q Consensus 297 ~~v~~i~~~~~~~l~~~~~~~~~ 319 (720)
+++.+++++++++.++++.+|.+
T Consensus 11 iIi~svl~GLLLL~Lii~~LwK~ 33 (54)
T 2l8s_A 11 VILLSAFAGLLLLMLLILALWKI 33 (54)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHc
Confidence 34444455555444445555543
No 456
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=55.78 E-value=37 Score=24.11 Aligned_cols=22 Identities=18% Similarity=0.163 Sum_probs=10.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 004994 297 IWVALSAAAILCALGCSLFMWR 318 (720)
Q Consensus 297 ~~v~~i~~~~~~~l~~~~~~~~ 318 (720)
+++.+++++++++.++++.+|.
T Consensus 14 iIi~svl~GLllL~li~~~LwK 35 (54)
T 2knc_A 14 WVLVGVLGGLLLLTILVLAMWK 35 (54)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444454444444555554
No 457
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=47.80 E-value=21 Score=24.23 Aligned_cols=28 Identities=7% Similarity=-0.170 Sum_probs=13.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 004994 299 VALSAAAILCALGCSLFMWRYCKTRRVN 326 (720)
Q Consensus 299 v~~i~~~~~~~l~~~~~~~~~~~~r~~~ 326 (720)
|++.++++++++++.+++|...+.++++
T Consensus 16 VVgGv~~v~ii~~~~~~~~RRRr~~~kr 43 (44)
T 2l2t_A 16 VIGGLFILVIVGLTFAVYVRRKSIKKKR 43 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCSSCCC
T ss_pred ehHHHHHHHHHHHHHHHHhhhhhhhhcc
Confidence 3443334444445555556555555443
No 458
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=41.10 E-value=30 Score=23.45 Aligned_cols=19 Identities=16% Similarity=-0.092 Sum_probs=10.8
Q ss_pred HHHHHHHHHHHHHHHhhcc
Q 004994 307 LCALGCSLFMWRYCKTRRV 325 (720)
Q Consensus 307 ~~~l~~~~~~~~~~~~r~~ 325 (720)
++++++.+++|...+.+++
T Consensus 25 ~ii~~~~~~~~RRr~~~~k 43 (44)
T 2ks1_B 25 LVVALGIGLFMRRRHIVRK 43 (44)
T ss_dssp HHHHHHHHHHHHTTTCCSC
T ss_pred HHHHHHHHHHhhhhHhhcc
Confidence 3444566666666665553
No 459
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=40.88 E-value=1.3e+02 Score=30.35 Aligned_cols=135 Identities=19% Similarity=0.227 Sum_probs=67.3
Q ss_pred ccCCCceEEEEEeCCCcEEEEEEecccccccccHHHHHHHHHHHHccCCCceeEEEeE----------------------
Q 004994 449 GEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGY---------------------- 506 (720)
Q Consensus 449 g~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~---------------------- 506 (720)
..|. +-||.+.. ++..|+||-.. ....+.|..++...=.+.-|+.--+.-.
T Consensus 78 ~~Gs-tgvff~~t-d~~~~VVK~s~-----~l~~E~l~s~LA~~LGlpiP~~Riv~~~~~E~~e~~~~L~~~~~~~~~l~ 150 (342)
T 1cja_A 78 EKGT-EGLFFVET-ESGVFIVKRST-----NIESETFCSLLCMRLGLHAPKVRVVSSNSEEGTNMLECLAAIDKSFRVIT 150 (342)
T ss_dssp CSTT-SCEEEEEE-SSCEEEEECCT-----THHHHHHHHHHHHHHTCCCCCEEEEESSSHHHHHHHHHHHHHCSSSCHHH
T ss_pred cCCC-CCeEEEEe-CCCEEEEeCcH-----HHHHHHHHHHHHHHhCCCCCCeeEEeeCcHHHHHHHHHHHHhhhhhHHHH
Confidence 4454 55666654 57789999542 1233344444444334444543222211
Q ss_pred eccCCeEEEEEeeCCCCCHHHHhhccchhccccCHHHHHHHHHHHHHHHHHHHhcC-CCCeee-cCCCCCCeEEcCCCC-
Q 004994 507 CNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVC-EPPIVH-GNFKSSNILLDEKLI- 583 (720)
Q Consensus 507 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~-~~~ivH-rDlkp~NiLl~~~~~- 583 (720)
....+..+++|+|.+|..|.+.-+.. ....+.......+ +-.-++.++.... +-+.+. .--.++|||++++..
T Consensus 151 ~l~~~~~~l~meyv~G~~L~e~~~~~--~~~~f~~~~~k~L--G~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~n~~ 226 (342)
T 1cja_A 151 TLANQANILLMELVRGITLNKLTTTS--APEVLTKSTMQQL--GSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSERGAT 226 (342)
T ss_dssp HHTTCSEEEEEECCCEEESTTCCSSS--HHHHSCHHHHHHH--HHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESBTTC
T ss_pred HhhcccceehhhhcCCCccccchhhh--hhhhcCHHHHHhh--chhheehhhhcCCccCcccccCCCChhheEEeCCCCe
Confidence 01123567999999976655432211 0112222222211 1122344444433 222222 235788999987655
Q ss_pred eEEccccCCCC
Q 004994 584 VRVSDCGLAPL 594 (720)
Q Consensus 584 ~kl~DFGla~~ 594 (720)
+.++|-+++..
T Consensus 227 ~~~IDhn~af~ 237 (342)
T 1cja_A 227 VVPIDSKIIPL 237 (342)
T ss_dssp EEECSCCCCCC
T ss_pred EEEEcCCcccc
Confidence 88999998854
No 460
>2jp3_A FXYD domain-containing ION transport regulator 4; protein, transcription; NMR {Rattus norvegicus}
Probab=38.96 E-value=31 Score=25.45 Aligned_cols=25 Identities=32% Similarity=0.507 Sum_probs=13.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh
Q 004994 299 VALSAAAILCALGCSLFMWRYCKTR 323 (720)
Q Consensus 299 v~~i~~~~~~~l~~~~~~~~~~~~r 323 (720)
.+++.+++++++++++++...|+.+
T Consensus 20 gGLifA~vLfi~GI~iilS~kcrCk 44 (67)
T 2jp3_A 20 GGLIFGGLLCIAGIALALSGKCKCR 44 (67)
T ss_dssp HHHHHHHHHHHHHHHHHHTTHHHHH
T ss_pred cchhhHHHHHHHHHHHHHcCccccc
Confidence 4455555666666666655444443
No 461
>2k1a_A Integrin alpha-IIB; single-PASS transmembrane segment, alternative splicing, calcium, cell adhesion, cleavage on PAIR of basic residues; NMR {Homo sapiens} PDB: 2k9j_A
Probab=33.02 E-value=66 Score=21.50 Aligned_cols=21 Identities=19% Similarity=0.127 Sum_probs=9.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 004994 297 IWVALSAAAILCALGCSLFMW 317 (720)
Q Consensus 297 ~~v~~i~~~~~~~l~~~~~~~ 317 (720)
+++..++++++++.+.++.+|
T Consensus 12 iIi~s~l~GLllL~li~~~Lw 32 (42)
T 2k1a_A 12 WVLVGVLGGLLLLTILVLAMW 32 (42)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 334444444444444444444
No 462
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=30.77 E-value=3e+02 Score=30.27 Aligned_cols=46 Identities=20% Similarity=0.171 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHH--HHHHHHHhcCCCCeeecCCCCCCeEEcCCCCeEEccccCCC
Q 004994 541 WNIRIRVALGAA--RALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAP 593 (720)
Q Consensus 541 ~~~~~~i~~~ia--~~L~~LH~~~~~~ivHrDlkp~NiLl~~~~~~kl~DFGla~ 593 (720)
|..+..++...| ..+.|+=.. +|=.++|||+|.+|++.=+|||..-
T Consensus 454 ~~a~~nF~~S~A~ySvv~YILGi-------gDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 454 AEVMDTYVKSCAGYCVITYILGV-------GDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTC-------CCCCTTSEEECTTSCEEECCCSSCT
T ss_pred HHHHHHHHHHHHHHhHhheeeec-------cCCCCcceeEcCCCCEeeeehHHhh
Confidence 445555555443 456666543 4777999999999999999999873
No 463
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=27.28 E-value=1.3e+02 Score=24.27 Aligned_cols=38 Identities=16% Similarity=0.155 Sum_probs=16.9
Q ss_pred chhhcccccccccccccccCCCCCchhcCCCCCceEecc
Q 004994 135 ESLSRLTQLLDLSLNNNHLNGGIPDAFHQFTGLINFDLS 173 (720)
Q Consensus 135 ~~l~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls 173 (720)
..|.+|++|+.+.|-.+ ++..-..+|.+|.+|+.+.+.
T Consensus 14 ~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~ 51 (100)
T 2lz0_A 14 SLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILT 51 (100)
T ss_dssp CTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEEC
T ss_pred HHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEc
Confidence 34555555555554433 221223345555555555443
No 464
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=26.51 E-value=84 Score=25.36 Aligned_cols=47 Identities=15% Similarity=0.044 Sum_probs=33.1
Q ss_pred ccCCCCCchhcCCCCCceEeccCCcccccCCCCCCCCCCCceeecccc
Q 004994 152 HLNGGIPDAFHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNN 199 (720)
Q Consensus 152 ~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N 199 (720)
.++..-..+|.++++|+.+.|-.+ ++..-..+|.+|.+|+.+.+...
T Consensus 7 ~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 7 PVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp CCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCS
T ss_pred ccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCC
Confidence 444444567889999999988765 44244567888888888877554
No 465
>2zxe_G FXYD10, phospholemman-like protein; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_G*
Probab=20.08 E-value=41 Score=25.33 Aligned_cols=20 Identities=35% Similarity=0.654 Sum_probs=10.5
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 004994 299 VALSAAAILCALGCSLFMWR 318 (720)
Q Consensus 299 v~~i~~~~~~~l~~~~~~~~ 318 (720)
.+++.+++++++++++++..
T Consensus 22 gGLifA~vLfi~GI~iilS~ 41 (74)
T 2zxe_G 22 VGLIVAAVLCVIGIIILLAG 41 (74)
T ss_dssp HHHHHHHHHHHHHHHHHTTT
T ss_pred ccchhHHHHHHHHHHHHHcC
Confidence 44455555555555555543
No 466
>2k9j_B Integrin beta-3; transmembrane complex, cell adhesion, cleavage on basic residues, disease mutation, glycoprotein, pyrrolidone carboxylic acid; NMR {Homo sapiens} PDB: 2rmz_A 2rn0_A 2l91_A
Probab=20.06 E-value=1.5e+02 Score=19.88 Aligned_cols=7 Identities=29% Similarity=1.137 Sum_probs=3.0
Q ss_pred HHHHHHH
Q 004994 314 LFMWRYC 320 (720)
Q Consensus 314 ~~~~~~~ 320 (720)
++.|.++
T Consensus 28 Lliwk~~ 34 (43)
T 2k9j_B 28 LLIWKLL 34 (43)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 3445444
Done!