Citrus Sinensis ID: 004994

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720

MGYVNYGMCVGLTMALAVLTAPFCAGVTDPRDVMALNSLYISLNFPPLEKWLSFGGDPCGDSWQGVFCVFSNVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSNLPVTVRNFSLSGNQLTGSIPESLSRLTQLLDLSLNNNHLNGGIPDAFHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNNKLSGTLNVLEDLHLIDLNIENNLFSGPIPEKLLSIPNFRKDGNPFNTTVIALPPTAIPPSIAPAPTFQAPGDQADAPSAFEMTNSAKAKKFWTTKRVIWVALSAAAILCALGCSLFMWRYCKTRRVNRDAEKNTGTYKGHGEKPNYKNSPLQPSGQVEEVSKEPVVKSQDGHGVDSRRMVSSPRPQDEKLPLPPLPLPLVEKVTVKPLAPAEVTRRSSPSTNVISSSVSVFTIASLQQYTNSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTVSQRQTDEEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFESGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCMI

cccccHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHccccccccccccccccccccccCEEEEccEEEEEEEccccccccccccccccccccEEEcccccccccccccccccccEEEcccccccccccccccccccccccccccccccccccccccccccccEEccccccccccccccccccccccEEEEcccccEEECcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEHHHHHHHHHHHHHHHHHHEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEcHHHHHHHHcccccccEEccccccEEEEEECccccEEEEEEcccccccccccHHHHHHHHHHHccccccccccEEEEccccEEEEEEECcccccHHHHccccccccccccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHccccccccccHHHHHHHHHHcc

**YVNYGMCVGLTMALAVLTAPFCAGVTDPRDVMALNSLYISLNFPPLEKWLSFGGDPCGDSWQGVFCVFSNVTEIRLTGMNLGGVLADTLGDLESVINIDLSNNHIGGSIPSNLPVTVRNFSLSGNQLTGSIPESLSRLTQLLDLSLNNNHLNGGIPDAFHQFTGLINFDLSANNLTGQLPPSTRNLSSLYSLHLQNNKLSGTLNVLEDLHLIDLNIENNLFSGPIPEKLLSIPNFRKDGNPFNTTVIALPP*********************************AKKFWTTKRVIWVALSAAAILCALGCSLFMWRYCKTRRV***************************************************************************************************SSVSVFTIASLQQYTNSFSEGNFIGEGLLGSVYKAELPGGKLLAVKKLSNTV****T*EEFLELASTISRLRHGNIVELIGYCNEHGQHLLVYDYGGNCTLHDLLHSDEEAHKKFSWNIRIRVALGAARALQYLQEVCEPPIVHGNFKSSNILLDEKLIVRVSDCGLAPLLFSGSTNELSEGLLTAHGSGAPEFESGSYSCQSDVYSLGVVMLELLTGRKPYDRSRPRGEQSLVRWAIPRLHDIDALSRMVDPSLDGAYLAKSLSRFADIISRCVQWEPGFRPPMSEIVQDLLCMI

xxxHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx

SSSSSSSSSSSSSSSSSSSSSxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
Protein STRUBBELIG	Regulates the expression of transcription factors that define the cell fates. Seems to be required for the regulation of cell shape and the orientation of the mitotic division plane. Involved in root hair specification, in the formation of the outer integument and the shape of organs such as carpels and petals and is necessary for the shape and height of the stem.	probable	Q8RWZ1

Prediction of Enzyme Commission Number

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1ZIW, chain A
Confidence level:very confident
Coverage over the Query: 66-249
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Template: 3RGZ, chain A
Confidence level:very confident
Coverage over the Query: 27-249
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Template: 3VHE, chain A
Confidence level:very confident
Coverage over the Query: 536-659,670-720
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Template: 3UIM, chain A
Confidence level:very confident
Coverage over the Query: 427-718
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Template: 3RIZ, chain A
Confidence level:probable
Coverage over the Query: 73-232
View the alignment between query and template
View the model in PyMOL