BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 004995
(720 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q94KI8|TPC1_ARATH Two pore calcium channel protein 1 OS=Arabidopsis thaliana GN=TPC1
PE=1 SV=1
Length = 733
Score = 1033 bits (2672), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 504/709 (71%), Positives = 584/709 (82%), Gaps = 28/709 (3%)
Query: 33 RRTDAITRGSPYQKAAALVDLAEDGIGLPEEILDRSSFESSAKFYFIFIKFDYIWSLNYF 92
RR++AIT G+P+QKAAALVDLAEDGIGLP EILD+SSF SA++YFIF + D IWSLNYF
Sbjct: 20 RRSEAITHGTPFQKAAALVDLAEDGIGLPVEILDQSSFGESARYYFIFTRLDLIWSLNYF 79
Query: 93 ALIVLNFLEKPLWCAKTGVGTYSCYDREYYYLGQLPYLTGWESLVYEGITLVILIIHTFF 152
AL+ LNF E+PLWC K SC DR+YYYLG+LPYLT ES++YE ITL IL++HTFF
Sbjct: 80 ALLFLNFFEQPLWCEKNP--KPSCKDRDYYYLGELPYLTNAESIIYEVITLAILLVHTFF 137
Query: 153 PITYEGSPIFWKSTYTRLKVLCLLILVADFLVYGLYLSPIAFNFLPLRIAPYIRVVFFIL 212
PI+YEGS IFW S +KV C++IL D LV LYLSP+AF+FLP RIAPY+RV+ FIL
Sbjct: 138 PISYEGSRIFWTSRLNLVKVACVVILFVDVLVDFLYLSPLAFDFLPFRIAPYVRVIIFIL 197
Query: 213 NIRQLRDTLFVLAGMLGTYLNVLALGLLFLLFSSWLAYVIFEDTVQ-------------- 258
+IR+LRDTL +L+GMLGTYLN+LAL +LFLLF+SW+A+V+FEDT Q
Sbjct: 198 SIRELRDTLVLLSGMLGTYLNILALWMLFLLFASWIAFVMFEDTQQGLTVFTSYGATLYQ 257
Query: 259 -----------DVWIPAYKASRWYCLFFVLYVLIGVYFVTNLILAVVYDSFKSQLAKQVS 307
DVWIPAYK+SRW +FFVLYVLIGVYFVTNLILAVVYDSFK QLAKQVS
Sbjct: 258 MFILFTTSNNPDVWIPAYKSSRWSSVFFVLYVLIGVYFVTNLILAVVYDSFKEQLAKQVS 317
Query: 308 EMDRMRRRTLGKAFNLIDNYNVGFLNKEQCIKLFEELNKYRTLPNISREEFELIFDELDD 367
MD+M+RR L KAF LID+ G ++K QCIKLFE+L YRTLP IS+EEF LIFDELDD
Sbjct: 318 GMDQMKRRMLEKAFGLIDSDKNGEIDKNQCIKLFEQLTNYRTLPKISKEEFGLIFDELDD 377
Query: 368 THDFKINLDEFADLCNAIALRFQKEDVPSCFENLPSIYHSPFSEKLKAFIRSTKFGYMIS 427
T DFKIN DEFADLC AIALRFQKE+VPS FE+ P IYHS S++L+AF+RS FGY IS
Sbjct: 378 TRDFKINKDEFADLCQAIALRFQKEEVPSLFEHFPQIYHSALSQQLRAFVRSPNFGYAIS 437
Query: 428 IILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLEMALKIYSYGFENYWRDGQN 487
ILI+N +AV+VETTLDI+ESS Q WQ EFVFGWIYVLEMALKIY+YGFENYWR+G N
Sbjct: 438 FILIINFIAVVVETTLDIEESSAQKPWQVAEFVFGWIYVLEMALKIYTYGFENYWREGAN 497
Query: 488 RFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFVAT 547
RFDFLVTWVIVIGET T +P+ TF SNGEWIRYLLLARMLRLIRLLM+VQ+YR F+AT
Sbjct: 498 RFDFLVTWVIVIGETATFITPDENTFFSNGEWIRYLLLARMLRLIRLLMNVQRYRAFIAT 557
Query: 548 FLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAGNAKLEETDLADDDYLLFNFNDYP 607
F+TLIPSLMPYLGTIFCV CIYCS+GVQ+FGG+VNAGN KL ET+LA+DDYLLFNFNDYP
Sbjct: 558 FITLIPSLMPYLGTIFCVLCIYCSIGVQVFGGLVNAGNKKLFETELAEDDYLLFNFNDYP 617
Query: 608 NGMVTLFNLLVMGNWQVWMQSYKELTGTAWTLAYFVSFYLITVLLLLNLVIAFVLEAFFA 667
NGMVTLFNLLVMGNWQVWM+SYK+LTGT W++ YFVSFY+IT+LLLLNLV+AFVLEAFF
Sbjct: 618 NGMVTLFNLLVMGNWQVWMESYKDLTGTWWSITYFVSFYVITILLLLNLVVAFVLEAFFT 677
Query: 668 EMELESSEKCEEEDKDGEPRERRRRVGTKTRSQKVDVLLHHMLSAELQK 716
E++LE EKC+ +D E R RRR G+K+RSQ+VD LLHHML EL K
Sbjct: 678 ELDLEEEEKCQGQDSQ-EKRNRRRSAGSKSRSQRVDTLLHHMLGDELSK 725
>sp|Q75VR1|TPC1A_TOBAC Two pore calcium channel protein 1A OS=Nicotiana tabacum GN=TPC1A
PE=2 SV=1
Length = 735
Score = 1016 bits (2626), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 511/742 (68%), Positives = 599/742 (80%), Gaps = 36/742 (4%)
Query: 3 EDLLVSGEASGNNRNNDNNRRRRGPTALFRRRTDAITRGSPYQKAAALVDLAEDGIGLPE 62
E+ L+SGE+S + R RRR G ++F RR DAI GS YQKAAALVDLAEDGIGLPE
Sbjct: 2 EEYLLSGESSNSGRT----RRRIG--SIFDRR-DAIAHGSAYQKAAALVDLAEDGIGLPE 54
Query: 63 EILDRSSFESSAKFYFIFIKFDYIWSLNYFALIVLNFLEKPLWCAKTGVGTYSCYDREYY 122
EIL+ +SFE +A+ YFIF +FD++WSLNY AL+VLNF EKPLWC+K SC +R+YY
Sbjct: 55 EILEGASFEKAAELYFIFTRFDFLWSLNYLALVVLNFFEKPLWCSKHLAE--SCNNRDYY 112
Query: 123 YLGQLPYLTGWESLVYEGITLVILIIHTFFPITYEGSPIFWKSTYTRLKVLCLLILVADF 182
YLG+LP+LTG ESL++EG+TL++LIIH FPI+YEG ++W+S R+KV+ LLILVAD
Sbjct: 113 YLGELPFLTGAESLIFEGVTLLLLIIHILFPISYEGFNLYWRSLLNRVKVILLLILVADI 172
Query: 183 LVYGLYLSPIAFNFLPLRIAPYIRVVFFILNIRQLRDTLFVLAGMLGTYLNVLALGLLFL 242
+VY L+L+ F +LP RIAPY+RVVFFILNIR+LRD+ F+LAGMLGTYLNV+AL LFL
Sbjct: 173 VVYILFLAD--FYYLPFRIAPYLRVVFFILNIRELRDSFFILAGMLGTYLNVVALSALFL 230
Query: 243 LFSSWLAYVIFEDTVQ-------------------------DVWIPAYKASRWYCLFFVL 277
LFSSWLAYV FEDT Q DVWIPAYK SRWYCLFFVL
Sbjct: 231 LFSSWLAYVFFEDTRQGKTTFTSYGTTLYQMFVLFTTSNNPDVWIPAYKDSRWYCLFFVL 290
Query: 278 YVLIGVYFVTNLILAVVYDSFKSQLAKQVSEMDRMRRRTLGKAFNLIDNYNVGFLNKEQC 337
YVL+GVYFVTNLILAVVYDSFKS+L KQV++ DR+R RTL KAF+LID N G LN++QC
Sbjct: 291 YVLLGVYFVTNLILAVVYDSFKSELVKQVADKDRLRLRTLKKAFSLIDEANNGHLNEKQC 350
Query: 338 IKLFEELNKYRTLPNISREEFELIFDELDDTHDFKINLDEFADLCNAIALRFQKEDVPSC 397
LFEELNKYRTLP IS ++F+ IF ELDDT DFKINLDEFADLC AI LRFQKED
Sbjct: 351 TLLFEELNKYRTLPKISGDDFKSIFSELDDTGDFKINLDEFADLCTAIGLRFQKEDSLPI 410
Query: 398 FENLPSIYHSPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEV 457
FE P+ YHSP SEKL+ F+R F Y+I +L+VNLVAVI+ETTLDIQ +S Q+ WQ+V
Sbjct: 411 FEACPNFYHSPASEKLRGFVRGATFEYIIVFVLLVNLVAVIIETTLDIQNNSGQTFWQKV 470
Query: 458 EFVFGWIYVLEMALKIYSYGFENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNG 517
EF FGW+YV+EMALK+Y+YGFENYWRDGQNRFDF+VTWVIVIGET T +P+G TFLSNG
Sbjct: 471 EFTFGWLYVIEMALKVYTYGFENYWRDGQNRFDFVVTWVIVIGETATFVAPDGLTFLSNG 530
Query: 518 EWIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIF 577
EWIRYLL+ARMLRLIRLLMHV++YR FVATF TLIPSL+PYLGTIFC+ C YCSLG+QIF
Sbjct: 531 EWIRYLLIARMLRLIRLLMHVERYRAFVATFFTLIPSLVPYLGTIFCILCFYCSLGLQIF 590
Query: 578 GGIVNAGNAKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWMQSYKELTGTAW 637
GGIVN GN L +TDLA +DYLLFNFNDYPNGMVTLFN+LVMGNWQVWMQSYKELTGTAW
Sbjct: 591 GGIVNTGNPNLAQTDLAGNDYLLFNFNDYPNGMVTLFNILVMGNWQVWMQSYKELTGTAW 650
Query: 638 TLAYFVSFYLITVLLLLNLVIAFVLEAFFAEMELESSEKCEEEDKDGEPRERRRRVGTKT 697
T AYFVSFYLI+VL LLNL++AFVLEAF AE++LE+S +C + D ERRR VGTKT
Sbjct: 651 TYAYFVSFYLISVLWLLNLIVAFVLEAFQAEVDLEASARCVDGDDKEAKSERRRNVGTKT 710
Query: 698 RSQKVDVLLHHMLSAELQKSCD 719
RSQ+VD LLHHML +EL + +
Sbjct: 711 RSQRVDFLLHHMLRSELTECSN 732
>sp|Q75VR0|TPC1B_TOBAC Two pore calcium channel protein 1B OS=Nicotiana tabacum GN=TPC1B
PE=2 SV=1
Length = 735
Score = 998 bits (2581), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 512/742 (69%), Positives = 599/742 (80%), Gaps = 36/742 (4%)
Query: 3 EDLLVSGEASGNNRNNDNNRRRRGPTALFRRRTDAITRGSPYQKAAALVDLAEDGIGLPE 62
E+ L+ GE+S + R RRR G ++F RR DAI GS YQKAAALVDLAEDGIGLPE
Sbjct: 2 EEYLLPGESSNSCRT----RRRSG--SIFDRR-DAIAHGSAYQKAAALVDLAEDGIGLPE 54
Query: 63 EILDRSSFESSAKFYFIFIKFDYIWSLNYFALIVLNFLEKPLWCAKTGVGTYSCYDREYY 122
EIL+ +SFE +A+ YF+F +FD++WSLNY AL+VLNF EKPLWC+K SC +R+YY
Sbjct: 55 EILEGASFEKAAELYFMFTRFDFLWSLNYLALVVLNFFEKPLWCSKHLAE--SCNNRDYY 112
Query: 123 YLGQLPYLTGWESLVYEGITLVILIIHTFFPITYEGSPIFWKSTYTRLKVLCLLILVADF 182
YLG+LP+LTG ESL++EG+TL++LIIH FPI+YEG ++W+S RLKV+ LLILVAD
Sbjct: 113 YLGELPFLTGAESLIFEGVTLLLLIIHILFPISYEGFNLYWRSLLNRLKVILLLILVADI 172
Query: 183 LVYGLYLSPIAFNFLPLRIAPYIRVVFFILNIRQLRDTLFVLAGMLGTYLNVLALGLLFL 242
+VY L P F +LP RIAPY+RVVFFILNIR+LRD+ F+LAGMLGTYLNV+AL LFL
Sbjct: 173 VVY--ILLPADFYYLPFRIAPYLRVVFFILNIRELRDSFFILAGMLGTYLNVVALSALFL 230
Query: 243 LFSSWLAYVIFEDTVQ-------------------------DVWIPAYKASRWYCLFFVL 277
LFSSWLAYV FEDT Q DVWIPAYK SRWYCLFFVL
Sbjct: 231 LFSSWLAYVFFEDTRQGKTTFTSYGTTLYQMFVLFTTSNNPDVWIPAYKDSRWYCLFFVL 290
Query: 278 YVLIGVYFVTNLILAVVYDSFKSQLAKQVSEMDRMRRRTLGKAFNLIDNYNVGFLNKEQC 337
YVL+GVYFVTNLILAVVYDSFKS+L KQV++ DR+R RTL KAF+LID N G LN++QC
Sbjct: 291 YVLLGVYFVTNLILAVVYDSFKSELVKQVADKDRLRLRTLKKAFSLIDEANNGLLNEKQC 350
Query: 338 IKLFEELNKYRTLPNISREEFELIFDELDDTHDFKINLDEFADLCNAIALRFQKEDVPSC 397
LFEELNKYRTLP IS ++F+ IF+ELDDT DFKINL+EFADLC+AI LRFQKED
Sbjct: 351 TLLFEELNKYRTLPKISGDDFKSIFNELDDTGDFKINLEEFADLCSAIGLRFQKEDSLPI 410
Query: 398 FENLPSIYHSPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEV 457
FE P+ YHSP SEKL+ FIR F Y+I +L+VNLVAVI+ETTLDIQ +S Q+ WQ+V
Sbjct: 411 FEACPNFYHSPASEKLRGFIRGATFEYIIVFVLLVNLVAVIIETTLDIQNNSGQTFWQKV 470
Query: 458 EFVFGWIYVLEMALKIYSYGFENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNG 517
EF FGW+YV+EMALK+Y+YGFENYWRDGQNRFDF+VTWVIVIGET T +P+ TFLSNG
Sbjct: 471 EFTFGWLYVIEMALKVYTYGFENYWRDGQNRFDFIVTWVIVIGETTTFVAPDDLTFLSNG 530
Query: 518 EWIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIF 577
EWIRYLL+ARMLRLIRLLMHV++YR FVATFLTLIPSLMPYLGTIFC+ C YCSLG+QIF
Sbjct: 531 EWIRYLLIARMLRLIRLLMHVERYRAFVATFLTLIPSLMPYLGTIFCILCFYCSLGLQIF 590
Query: 578 GGIVNAGNAKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWMQSYKELTGTAW 637
GGIVN GN L +TDLA +DYLLFNFNDYPNGMVTLFN+LVMGNWQVWMQSYKELTGT+W
Sbjct: 591 GGIVNTGNPNLAQTDLAGNDYLLFNFNDYPNGMVTLFNILVMGNWQVWMQSYKELTGTSW 650
Query: 638 TLAYFVSFYLITVLLLLNLVIAFVLEAFFAEMELESSEKCEEEDKDGEPRERRRRVGTKT 697
T AYFVSFYLI+VL LLNL++AFVLEAF AEM+LE+S +C + D RERRR VGTKT
Sbjct: 651 TYAYFVSFYLISVLWLLNLIVAFVLEAFQAEMDLEASARCVDGDDKEAKRERRRNVGTKT 710
Query: 698 RSQKVDVLLHHMLSAELQKSCD 719
RSQ+VD LLHHML +EL + +
Sbjct: 711 RSQRVDFLLHHMLRSELTECSN 732
>sp|Q5QM84|TPC1_ORYSJ Two pore calcium channel protein 1 OS=Oryza sativa subsp. japonica
GN=TPC1 PE=1 SV=2
Length = 757
Score = 846 bits (2186), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/712 (61%), Positives = 545/712 (76%), Gaps = 34/712 (4%)
Query: 31 FRRRTDAITRGSPYQKAAALVDLAEDGIGLPEEILDRSSFESSAKFYFIFIKFDYIWSLN 90
++RR+DA+ G+ YQKAAALVDLAEDG+G+PE++L+ + FE + +FYF++++ D++WSLN
Sbjct: 50 YQRRSDALAYGNRYQKAAALVDLAEDGVGIPEDVLNDTRFERAMRFYFVYLRLDWLWSLN 109
Query: 91 YFALIVLNFLEKPLWCAKTGVGTYSCYDREYYYLGQLPYLTGWESLVYEGITLVILIIHT 150
FALI+LNFLEKPLWC G ++C R+ Y+LGQLPYL+ ESL+YEG+TLVIL++
Sbjct: 110 LFALILLNFLEKPLWC--RGYSQHACDQRDLYFLGQLPYLSKTESLIYEGLTLVILVMDI 167
Query: 151 FFPITYEGSPIFWKSTYTRLKVLCLLILVADFLVYGLYLSPIAFNFLPLRIAPYIRVVFF 210
F+P++YEG +FWK+T +LKVL L IL D LV+ AF+ P R+APYIRV F
Sbjct: 168 FYPLSYEGLNLFWKNTINKLKVLLLFILACDILVF-------AFSPQPFRVAPYIRVAFL 220
Query: 211 ILNIRQLRDTLFVLAGMLGTYLNVLALGLLFLLFSSWLAYVIFEDTVQ------------ 258
I+NIR+LR L GM+GTYLNVLAL LLFLLF+SWLAYV FEDT Q
Sbjct: 221 IMNIRELRMCAVTLVGMVGTYLNVLALSLLFLLFASWLAYVTFEDTPQGKTVFSSYGTTL 280
Query: 259 -------------DVWIPAYKASRWYCLFFVLYVLIGVYFVTNLILAVVYDSFKSQLAKQ 305
DVW+PAYK+SRW LFF++YVL+GVYF+TNLILAV+YDSFK QLAKQ
Sbjct: 281 YQMFILFTTSNNPDVWVPAYKSSRWSSLFFIVYVLLGVYFLTNLILAVIYDSFKEQLAKQ 340
Query: 306 VSEMDRMRRRTLGKAFNLIDNYNVGFLNKEQCIKLFEELNKYRTLPNISREEFELIFDEL 365
VS+ D R+ L KAF +ID G+LNKEQC+ L +ELNKYR+LP SRE+FELIF EL
Sbjct: 341 VSQADCTRKSILEKAFGIIDATGQGYLNKEQCLSLLDELNKYRSLPKTSREDFELIFAEL 400
Query: 366 DDTHDFKINLDEFADLCNAIALRFQKEDVPSCFENLPSIYHSPFSEKLKAFIRSTKFGYM 425
D + DFK+ +EFA LCN IA++FQKE PS E PS YHS E LK+F+RS F Y+
Sbjct: 401 DQSGDFKVTSEEFATLCNTIAIKFQKEPPPSYLEKYPSFYHSALCEWLKSFVRSPLFEYI 460
Query: 426 ISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLEMALKIYSYGFENYWRDG 485
+ +L++NLVAVI+ETTLDI+ SS Q VWQEVEFVFGWIYV+EMALKI+S GF YW +G
Sbjct: 461 VIFVLLMNLVAVIIETTLDIENSSSQKVWQEVEFVFGWIYVIEMALKIFSLGFGAYWMEG 520
Query: 486 QNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFV 545
QN+FDF++TW I IGET+T A P+ +FLSNGEWIRYLLL RMLRL R+L+ V+++R FV
Sbjct: 521 QNKFDFVLTWTIFIGETLTFAFPSKLSFLSNGEWIRYLLLGRMLRLTRILLQVRRFRAFV 580
Query: 546 ATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAGNAKLEETDLADDDYLLFNFND 605
ATF TL+ SLMPYLG +FC CIYCSLG+QIFGGIV AGN LEETDL +DYLLFNFND
Sbjct: 581 ATFFTLMSSLMPYLGIVFCTLCIYCSLGLQIFGGIVYAGNPTLEETDLFSNDYLLFNFND 640
Query: 606 YPNGMVTLFNLLVMGNWQVWMQSYKELTGTAWTLAYFVSFYLITVLLLLNLVIAFVLEAF 665
YP+GMVTLFNLLVMGNWQ WM+SY++LTG+ W+L YFVSFYLI+VLLLLNL++AFVLEAF
Sbjct: 641 YPSGMVTLFNLLVMGNWQAWMESYRQLTGSYWSLIYFVSFYLISVLLLLNLIVAFVLEAF 700
Query: 666 FAEMELESSEKCEEEDKDGEPRERRRRVGTKTRSQKVDVLLHHMLSAELQKS 717
FAEMELE + + +D E R RRR V +T+ VD+LLHHMLS EL S
Sbjct: 701 FAEMELEKDGEADIQDPTLEGRNRRRSVRVRTKGTMVDILLHHMLSNELDGS 752
>sp|Q6YLX9|TPC1_WHEAT Two pore calcium channel protein 1 OS=Triticum aestivum GN=TPC1
PE=2 SV=1
Length = 742
Score = 842 bits (2176), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/745 (58%), Positives = 551/745 (73%), Gaps = 36/745 (4%)
Query: 1 MEEDLLVSGEASGNNRNNDNNRRRRGPTALFRRRTDAITRGSPYQKAAALVDLAEDGIGL 60
+ E+ G AS +R + +G +RRR+DA+ G YQKAAALVDLAEDG+G+
Sbjct: 9 ITEEAAERGLASSGSRRLSDGAGGQGSRK-YRRRSDALAYGDRYQKAAALVDLAEDGVGI 67
Query: 61 PEEILDRSSFESSAKFYFIFIKFDYIWSLNYFALIVLNFLEKPLWCAKTGVGTYSCYDRE 120
PE++L+ + F + FYF++++ D++WSLN FALI+LNFLEKPLWC K + Y R+
Sbjct: 68 PEDVLNDTRFGRAMSFYFVYLRLDWLWSLNLFALILLNFLEKPLWCRKDALQAYD--QRD 125
Query: 121 YYYLGQLPYLTGWESLVYEGITLVILIIHTFFPITYEGSPIFWKSTYTRLKVLCLLILVA 180
Y+LGQLPY + ESL+YEG+TLVIL++ F P++YEG IFW+ST +LK++ L IL
Sbjct: 126 LYFLGQLPYFSKTESLIYEGLTLVILVMDIFCPLSYEGLNIFWRSTTNKLKIVLLFILAC 185
Query: 181 DFLVYGLYLSPIAFNFLPLRIAPYIRVVFFILNIRQLRDTLFVLAGMLGTYLNVLALGLL 240
D LV+ AF+ P R+APYIRVVF I+ IR+LR LAG++GTYLNVLAL LL
Sbjct: 186 DILVF-------AFSSQPFRLAPYIRVVFLIMTIRELRMCAITLAGLIGTYLNVLALSLL 238
Query: 241 FLLFSSWLAYVIFEDTVQ-------------------------DVWIPAYKASRWYCLFF 275
FLLF+SWLAYV FEDT Q DVW+ AYK RWY LFF
Sbjct: 239 FLLFASWLAYVTFEDTPQGKTIFSSYGVTLYQMFVLFTTSNNPDVWVHAYKIPRWYSLFF 298
Query: 276 VLYVLIGVYFVTNLILAVVYDSFKSQLAKQVSEMDRMRRRTLGKAFNLIDNYNVGFLNKE 335
++YVL+GVYF+TNLILAV+YDSFK Q AKQ+ ++D +R+ L KAF+LID N G+L++E
Sbjct: 299 IVYVLLGVYFLTNLILAVIYDSFKEQFAKQLVQVDSIRKNILQKAFDLIDTNNRGYLDRE 358
Query: 336 QCIKLFEELNKYRTLPNISREEFELIFDELDDTHDFKINLDEFADLCNAIALRFQKEDVP 395
QCI L ELNKYR+LP SRE+FELIF ELD + DFK+ +EFADLCN IA++FQKE P
Sbjct: 359 QCISLLNELNKYRSLPKTSREDFELIFAELDRSGDFKVTSEEFADLCNTIAIKFQKEPPP 418
Query: 396 SCFENLPSIYHSPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQ 455
S E P YHSP +LK+F+RS F Y+I +L++NLVAVI+ETTLDI+ SS Q WQ
Sbjct: 419 SYLEKFP-FYHSPLCGRLKSFVRSRMFEYIIVFVLLINLVAVIIETTLDIENSSSQETWQ 477
Query: 456 EVEFVFGWIYVLEMALKIYSYGFENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLS 515
EVEF GWIYV EMALKI+S GF YW +GQN+FDF++TW I IGET+T A P+ FLS
Sbjct: 478 EVEFFLGWIYVAEMALKIFSLGFGAYWMEGQNKFDFVLTWTIFIGETLTFAFPSKLPFLS 537
Query: 516 NGEWIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQ 575
NGEWIRYLLL R+LRL R+L+ VQ++R FVATF TL+ SLMPYLG +FCV C+YCS+G+Q
Sbjct: 538 NGEWIRYLLLGRVLRLTRILLQVQRFRAFVATFFTLMSSLMPYLGIVFCVLCMYCSIGLQ 597
Query: 576 IFGGIVNAGNAKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWMQSYKELTGT 635
IFGGIV AGN LEETDL ++DYLLFNFNDYP+GMVTLFNLLVMGNWQVWM+SY +LTGT
Sbjct: 598 IFGGIVYAGNPTLEETDLFNNDYLLFNFNDYPSGMVTLFNLLVMGNWQVWMESYWQLTGT 657
Query: 636 AWTLAYFVSFYLITVLLLLNLVIAFVLEAFFAEMELESSEKCEEEDKDGEPRERRRRVGT 695
+W+L YFVSFYLI++LLLLNL++AFVLEAFFAEMELE E+ + ++ ++RR +
Sbjct: 658 SWSLIYFVSFYLISILLLLNLIVAFVLEAFFAEMELEKGEEVDIQNPTSGGIKKRRSMRV 717
Query: 696 KTRSQKVDVLLHHMLSAELQKSCDS 720
+++ VD+LLHHMLS EL S +S
Sbjct: 718 RSKGTMVDILLHHMLSNELDGSQNS 742
>sp|Q6S5H8|TPC1_HORVU Two pore calcium channel protein 1 OS=Hordeum vulgare GN=TPC1 PE=2
SV=1
Length = 742
Score = 829 bits (2142), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/745 (58%), Positives = 550/745 (73%), Gaps = 36/745 (4%)
Query: 1 MEEDLLVSGEASGNNRNNDNNRRRRGPTALFRRRTDAITRGSPYQKAAALVDLAEDGIGL 60
+ E+ G AS +R + +G +RRR+DA+ G YQKAAALVDLAEDG+G+
Sbjct: 9 ITEEAAERGLASSGSRRLSDGGGGQGSRK-YRRRSDALAHGDRYQKAAALVDLAEDGVGI 67
Query: 61 PEEILDRSSFESSAKFYFIFIKFDYIWSLNYFALIVLNFLEKPLWCAKTGVGTYSCYDRE 120
PE++L+ + F + FYF++++ D++WSLN FALI+LNFLEKPLWC K + ++C R+
Sbjct: 68 PEDVLNDTRFGRAMSFYFVYLRLDWLWSLNIFALILLNFLEKPLWCRKDAL--HACDQRD 125
Query: 121 YYYLGQLPYLTGWESLVYEGITLVILIIHTFFPITYEGSPIFWKSTYTRLKVLCLLILVA 180
Y+LGQLPY + ESL+YEG+TLVIL++ P++YEG IFW+ST +LK+L L IL
Sbjct: 126 MYFLGQLPYFSKTESLIYEGLTLVILVMEILCPLSYEGLNIFWRSTTNKLKILLLFILAC 185
Query: 181 DFLVYGLYLSPIAFNFLPLRIAPYIRVVFFILNIRQLRDTLFVLAGMLGTYLNVLALGLL 240
D LV+ AF+ P R+APYIRVVF I+ IR+LR LAG++GTYLNVLAL LL
Sbjct: 186 DILVF-------AFSSQPFRLAPYIRVVFLIMTIRELRMCAITLAGLIGTYLNVLALSLL 238
Query: 241 FLLFSSWLAYVIFEDTVQ-------------------------DVWIPAYKASRWYCLFF 275
FLLF+SWLAYV FEDT Q DVW+PAYK SRWY LFF
Sbjct: 239 FLLFASWLAYVTFEDTPQGKTIFSSYGVTLYQMFVLFTTSNNPDVWVPAYKISRWYSLFF 298
Query: 276 VLYVLIGVYFVTNLILAVVYDSFKSQLAKQVSEMDRMRRRTLGKAFNLIDNYNVGFLNKE 335
++YVL+GVYF+TNLILAV+YDSFK Q AKQ+ ++D +R+ L KAF LID G+L++E
Sbjct: 299 IVYVLLGVYFLTNLILAVIYDSFKEQFAKQLVQVDAIRKNILQKAFELIDTNTRGYLDRE 358
Query: 336 QCIKLFEELNKYRTLPNISREEFELIFDELDDTHDFKINLDEFADLCNAIALRFQKEDVP 395
QCI L ELNKYR+LP SRE+FELIF ELD + DFK+ +EFADLCN IA++FQKE P
Sbjct: 359 QCISLLNELNKYRSLPKTSREDFELIFAELDRSGDFKVTSEEFADLCNTIAIKFQKEPPP 418
Query: 396 SCFENLPSIYHSPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQ 455
S E P YHSP +LK+F+RS F Y+I +L++NLVAVI+ETTLDI+ SS Q WQ
Sbjct: 419 SYLEKFP-FYHSPVCGRLKSFVRSRTFEYIIVFVLLINLVAVIIETTLDIENSSSQETWQ 477
Query: 456 EVEFVFGWIYVLEMALKIYSYGFENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLS 515
EVEF GWIYV EMALKI+S GF YW +GQN+FDF++TW I IGET+T A P+ FLS
Sbjct: 478 EVEFFLGWIYVAEMALKIFSLGFGAYWMEGQNKFDFVLTWTIFIGETLTFAFPSKLPFLS 537
Query: 516 NGEWIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQ 575
NGEWIRYLLL R+LRL R+L+ VQ++R FVATF TL+ SLMPYLG +FC+ C+YCSLG+Q
Sbjct: 538 NGEWIRYLLLGRVLRLTRILLQVQRFRVFVATFFTLMSSLMPYLGIVFCILCMYCSLGLQ 597
Query: 576 IFGGIVNAGNAKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWMQSYKELTGT 635
IFGGIV AGN LEETDL +DYLLFNFNDYP+GMVTLFNLLVMGNWQVWM+SY +LTG+
Sbjct: 598 IFGGIVYAGNPTLEETDLFSNDYLLFNFNDYPSGMVTLFNLLVMGNWQVWMESYWQLTGS 657
Query: 636 AWTLAYFVSFYLITVLLLLNLVIAFVLEAFFAEMELESSEKCEEEDKDGEPRERRRRVGT 695
+W+L YFVSFYLI++LLLLNL++AFVLEAFFAEMELE E+ + + ++RR +
Sbjct: 658 SWSLIYFVSFYLISILLLLNLIVAFVLEAFFAEMELEKGEEVDIQSPTSGGIKKRRSMRV 717
Query: 696 KTRSQKVDVLLHHMLSAELQKSCDS 720
+++ VD+LLHHMLS EL S +S
Sbjct: 718 RSKGTMVDILLHHMLSNELDGSQNS 742
>sp|Q9ULQ1|TPC1_HUMAN Two pore calcium channel protein 1 OS=Homo sapiens GN=TPCN1 PE=1
SV=3
Length = 816
Score = 144 bits (364), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 123/443 (27%), Positives = 213/443 (48%), Gaps = 36/443 (8%)
Query: 259 DVWIPAYKASRWYCLFFVLYVLIGVYFVTNLILAVVYDSFKSQLAKQVSEMDRMRRRTLG 318
DV +P+Y + W C+FF++Y+ I +YF+ NL+LAVV+D+F ++ + +R +
Sbjct: 284 DVMMPSYSRNPWSCVFFIVYLSIELYFIMNLLLAVVFDTFNDIEKRKFKSLLLHKRTAIQ 343
Query: 319 KAFN-LIDNYNVGFLNKEQCIKLFEELNKYRTLPNISREEFELIFDELDDTHDFKINLDE 377
A+ LI ++ Q FE L ++ P +S E L F L+ + ++L +
Sbjct: 344 HAYRLLISQRRPAGISYRQ----FEGLMRFYK-PRMSARERYLTFKALNQNNTPLLSLKD 398
Query: 378 FADLCNAIALRFQ-KEDVPSCFENLPSIYHSPFSEKLKAFIRSTKFGYMISIILIVNLVA 436
F D+ AL+++ K++ F+ LP F + + ++S F Y + +++ VN V
Sbjct: 399 FYDIYEVAALKWKAKKNREHWFDELPRTALLIF-KGINILVKSKAFQYFMYLVVAVNGVW 457
Query: 437 VIVETTLDIQESSLQSVWQEVEFVFGWIYVLEMALKIYSYGFENYWRDGQNRFDFLVTWV 496
++VET + + VF IY +E+ LK+ G Y G N FDF VT
Sbjct: 458 ILVETFMLKGGNFFSKHVPWSYLVFLTIYGVELFLKVAGLGPVEYLSSGWNLFDFSVT-- 515
Query: 497 IVIGETITLASPNGQTFLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLM 556
A N E ++++ R L+L+RL ++YR + T L+P +
Sbjct: 516 -------VFAFLGLLALALNMEPFYFIVVLRPLQLLRLFKLKERYRNVLDTMFELLPRMA 568
Query: 557 PYLGTIFCVQCIYCSLGVQIFGGIV--NAGNAKL-------------EETDLADDDYLLF 601
T+ + +G++ F GIV N N T + + Y L
Sbjct: 569 SLGLTLLIFYYSFAIVGMEFFCGIVFPNCCNTSTVADAYRWRNHTVGNRTVVEEGYYYLN 628
Query: 602 NFNDYPNGMVTLFNLLVMGNWQVWMQSYKELTGTAWTLAYFVSFYLITVLLLLNLVIAFV 661
NF++ N VTLF L V+ NW + M+ T + W+ YF++FY++T ++++ +++AF+
Sbjct: 629 NFDNILNSFVTLFELTVVNNWYIIMEGVTSQT-SHWSRLYFMTFYIVT-MVVMTIIVAFI 686
Query: 662 LEAFFAEMELESSEKCEEEDKDG 684
LEAF M S K ++ + DG
Sbjct: 687 LEAFVFRMNY--SRKNQDSEVDG 707
>sp|Q9WTN5|TPC1_RAT Two pore calcium channel protein 1 OS=Rattus norvegicus GN=Tpcn1
PE=1 SV=2
Length = 817
Score = 144 bits (362), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 121/444 (27%), Positives = 218/444 (49%), Gaps = 38/444 (8%)
Query: 259 DVWIPAYKASRWYCLFFVLYVLIGVYFVTNLILAVVYDSFKSQLAKQVSEMDRMRRRTLG 318
DV +P+Y + W C+FF++Y+ I +YF+ NL+LAVV+D+F + + +R +
Sbjct: 285 DVMMPSYSRNPWSCVFFIVYLSIELYFIMNLLLAVVFDTFNDIEKHKFKSLLLHKRTAIQ 344
Query: 319 KAFN-LIDNYNVGFLNKEQCIKLFEELNKYRTLPNISREEFELIFDELDDTHDFKINLDE 377
A++ L+ ++ Q FE L ++ P +S E L F L+ ++ ++L +
Sbjct: 345 HAYHLLVSQRRPAGISYRQ----FEGLMRFYK-PRMSARERFLTFKALNQSNTPLLSLKD 399
Query: 378 FADLCNAIALRFQ-KEDVPSCFENLPSIYHSPFSEKLKAFIRSTKFGYMISIILIVNLVA 436
F D+ AL+++ K++ F+ LP F + + + S F Y + +++ VN V
Sbjct: 400 FYDIYEVAALQWKAKKNRQHWFDELPRTAFLIF-KGINILVNSKAFQYFMYLVVAVNGVW 458
Query: 437 VIVETTLDIQESSLQSVWQEVEFVFGWIYVLEMALKIYSYGFENYWRDGQNRFDFLVTWV 496
++VET + + + VF IY +E+ +K+ G Y G N FDF VT
Sbjct: 459 ILVETFMLKGGNFISKHVPWSYLVFLTIYGVELFMKVAGLGPVEYLSSGWNLFDFSVTAF 518
Query: 497 IVIG-ETITLASPNGQTFLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSL 555
+G +TL N E ++++ R L+L+RL ++YR + T L+P +
Sbjct: 519 AFLGLLALTL----------NMEPFYFIVVLRPLQLLRLFKLKKRYRNVLDTMFELLPRM 568
Query: 556 MPYLGTIFCVQCIYCSLGVQIFGGIV--NAGNAKL-------------EETDLADDDYLL 600
T+ + +G++ F G + N N+ +T + + Y L
Sbjct: 569 ASLGLTLLTFYYSFAIVGMEFFSGRLSPNCCNSSTVADAYRFINHTVGNKTKVEEGYYYL 628
Query: 601 FNFNDYPNGMVTLFNLLVMGNWQVWMQSYKELTGTAWTLAYFVSFYLITVLLLLNLVIAF 660
NF++ N VTLF L V+ NW + M+ T + W+ YF++FY++T ++++ +++AF
Sbjct: 629 NNFDNILNSFVTLFELTVVNNWYIIMEGVTSQT-SHWSRLYFMTFYIVT-MVVMTIIVAF 686
Query: 661 VLEAFFAEMELESSEKCEEEDKDG 684
+LEAF M S K +E + D
Sbjct: 687 ILEAFVFRMNY--SRKSQESEVDS 708
>sp|Q8BWC0|TPC2_MOUSE Two pore calcium channel protein 2 OS=Mus musculus GN=Tpcn2 PE=1
SV=1
Length = 731
Score = 142 bits (359), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 112/443 (25%), Positives = 207/443 (46%), Gaps = 36/443 (8%)
Query: 259 DVWIPAYKASRWYCLFFVLYVLIGVYFVTNLILAVVYDSFKSQLAKQVSEMDRMRRRTLG 318
DV IPAY +R + LFF+++ LIG F+ NL+ A++Y+ F+ L K + + RRR
Sbjct: 260 DVMIPAYTQNRAFALFFIVFTLIGSLFLMNLLTAIIYNQFRGYLMKSL-QTSLFRRRLGA 318
Query: 319 KAFNLIDNYNVGFLNKEQCIKLFEELNKYRTLPNISREEF-----ELIFDELDDTHDFKI 373
+A + G +N LP + + + + I ++ +
Sbjct: 319 RAAYEVLASRAG---PAGTTPELVGVNPETFLPVLQKTQLNKTHKQAIMQKVQSYEGRPM 375
Query: 374 NLDEFADLCNAIALRFQKEDVPSCFENLPSIYHSPFSEKLKAFIRSTKFGYMISIILIVN 433
DEF L + + KE L Y SPF + + F Y+ +++ + N
Sbjct: 376 LADEFQKLFDEVDKGLAKE------RPLKPQYQSPFLQTAQFIFSHHYFDYLGNLVALGN 429
Query: 434 LVAVIVETTLD---IQESSLQSVWQEVEFVFGWIYVLEMALKIYSYGFENYWRDGQNRFD 490
L+++ V LD + V ++++F Y+LE+ K+++ G Y N FD
Sbjct: 430 LLSICVFLVLDSDLLPGERDDFVLGILDYIFILYYLLELLFKVFALGLPGYLSYHSNVFD 489
Query: 491 FLVTWVIVIGETITLA---------SPNGQTFLSNGEWIRYLLLARMLRLIRLLMHVQQY 541
L+T ++++ E TLA P LS + R + + R +R++ +++
Sbjct: 490 GLLTIILLVSEICTLAVYRLPHSGWKPEQYGPLSLWDMTRLMNTLIVFRFLRIIPNIKPM 549
Query: 542 RGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGG-IVNAGNAKLEETD-------L 593
T L LIP+L + G + ++ +G+ +F G IV GN+ L +
Sbjct: 550 AEVANTILGLIPNLRAFGGILVVAYYVFAMIGINLFRGVIVPPGNSSLVPDNNSAVCGSF 609
Query: 594 ADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWMQSYKELTGTAWTLAYFVSFYLITVLLL 653
Y NF+D+ ++TL+N++V+ NWQV +++YK G W++ YFV ++L++ ++
Sbjct: 610 EQLGYWPNNFDDFAAALITLWNVMVVNNWQVILEAYKRYAG-PWSMVYFVLWWLVSSVIW 668
Query: 654 LNLVIAFVLEAFFAEMELESSEK 676
+NL +A +LE F + + ++
Sbjct: 669 INLFLALLLENFLHRWDPQGHKQ 691
>sp|Q9EQJ0|TPC1_MOUSE Two pore calcium channel protein 1 OS=Mus musculus GN=Tpcn1 PE=2
SV=1
Length = 817
Score = 141 bits (355), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 121/444 (27%), Positives = 214/444 (48%), Gaps = 42/444 (9%)
Query: 259 DVWIPAYKASRWYCLFFVLYVLIGVYFVTNLILAVVYDSFKSQLAKQVSEMDRMRRRTLG 318
DV +P+Y + W C+FF++Y+ I +YF+ NL+LAVV+D+F + + +R +
Sbjct: 285 DVMMPSYSRNPWSCVFFIVYLSIELYFIMNLLLAVVFDTFNDIEKHKFKSLLLHKRTAIQ 344
Query: 319 KAFNLIDNYN--VGFLNKEQCIKLFEELNKYRTLPNISREEFELIFDELDDTHDFKINLD 376
A+ L+ + G ++ FE L ++ P +S E L F L+ ++ ++L
Sbjct: 345 HAYGLLASQRRPAGISYRQ-----FEGLMRFYK-PRMSARERFLTFKALNQSNTPLLSLK 398
Query: 377 EFADLCNAIALRFQ-KEDVPSCFENLPSIYHSPFSEKLKAFIRSTKFGYMISIILIVNLV 435
+F D+ AL+++ K + F+ LP F + + + S F Y + +++ VN V
Sbjct: 399 DFYDIYEVAALQWKAKRNRQHWFDELPRTAFLIF-KGINILVNSKAFQYFMYLVVAVNGV 457
Query: 436 AVIVETTL--DIQESSLQSVWQEVEFVFGWIYVLEMALKIYSYGFENYWRDGQNRFDFLV 493
++VET + +S W + VF IY +E+ +K+ G Y G N FDF V
Sbjct: 458 WILVETFMLKGGNFTSKHVPWSYL--VFLTIYGVELFMKVAGLGPVEYLSSGWNLFDFSV 515
Query: 494 TWVIVIG-ETITLASPNGQTFLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLI 552
T +G +TL N E ++++ R L+L+RL ++YR + T L+
Sbjct: 516 TAFAFLGLLALTL----------NMEPFYFIVVLRPLQLLRLFKLKKRYRNVLDTMFELL 565
Query: 553 PSLMPYLGTIFCVQCIYCSLGVQIFGG--IVNAGNAKL-------------EETDLADDD 597
P + T+ + +G++ F G N N +T + +
Sbjct: 566 PRMASLGLTLLTFYYSFAIVGMEFFNGRLTPNCCNTSTVADAYRFINHTVGNKTKVEEGY 625
Query: 598 YLLFNFNDYPNGMVTLFNLLVMGNWQVWMQSYKELTGTAWTLAYFVSFYLITVLLLLNLV 657
Y L NF++ N VTLF L V+ NW + M+ T + W+ YF++FY++T ++++ ++
Sbjct: 626 YYLNNFDNILNSFVTLFELTVVNNWYIIMEGVTSQT-SHWSRLYFMTFYIVT-MVVMTII 683
Query: 658 IAFVLEAFFAEMELESSEKCEEED 681
+AF+LEAF M + E D
Sbjct: 684 VAFILEAFVFRMNYSRKSQDSEVD 707
>sp|Q8NHX9|TPC2_HUMAN Two pore calcium channel protein 2 OS=Homo sapiens GN=TPCN2 PE=1
SV=2
Length = 752
Score = 137 bits (345), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 117/441 (26%), Positives = 213/441 (48%), Gaps = 37/441 (8%)
Query: 259 DVWIPAYKASRWYCLFFVLYVLIGVYFVTNLILAVVYDSFKSQLAKQVSEMDRMRRRTLG 318
DV IPAY +R Y +FF+++ +IG F+ NL+ A++Y F+ L K + RR
Sbjct: 276 DVMIPAYSKNRAYAIFFIVFTVIGSLFLMNLLTAIIYSQFRGYLMKSLQTSLFRRRLGTR 335
Query: 319 KAFNLIDNY--NVGFLNKEQCIK---LFEELNKYRTLPNISREEFELIFDELDDTHDFKI 373
AF ++ + G + +K L + L K + + + + +++ +
Sbjct: 336 AAFEVLSSMVGEGGAFPQAVGVKPQNLLQVLQKVQ----LDSSHKQAMMEKVRSYGSVLL 391
Query: 374 NLDEFADLCNAIALRFQKEDVPSCFENLPSIYHSPFSEKLKAFIRSTKFGYMISIILIVN 433
+ +EF L N + KE P P Y SPF + + F Y+ ++I + N
Sbjct: 392 SAEEFQKLFNELDRSVVKEHPPR-----PE-YQSPFLQSAQFLFGHYYFDYLGNLIALAN 445
Query: 434 LVAVIVETTLDIQESSLQS---VWQEVEFVFGWIYVLEMALKIYSYGFENYWRDGQNRFD 490
LV++ V LD + + + VF Y+LEM LK+++ G Y N FD
Sbjct: 446 LVSICVFLVLDADVLPAERDDFILGILNCVFIVYYLLEMLLKVFALGLRGYLSYPSNVFD 505
Query: 491 FLVTWVIVIGETITLA---------SPNGQTFLSNGEWIRYLLLARMLRLIRLLMHVQQY 541
L+T V+++ E TLA P LS + R L + + R +R++ ++
Sbjct: 506 GLLTVVLLVLEISTLAVYRLPHPGWRPEMVGLLSLWDMTRMLNMLIVFRFLRIIPSMKLM 565
Query: 542 RGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNA--GNAKLEETDLADD--- 596
+T L L+ ++ + G + V ++ +G+ +F G++ A GN+ L + +
Sbjct: 566 AVVASTVLGLVQNMRAFGGILVVVYYVFAIIGINLFRGVIVALPGNSSLAPANGSAPCGS 625
Query: 597 ----DYLLFNFNDYPNGMVTLFNLLVMGNWQVWMQSYKELTGTAWTLAYFVSFYLITVLL 652
+Y NF+D+ +VTL+NL+V+ NWQV++ +Y+ +G W+ YFV ++L++ ++
Sbjct: 626 FEQLEYWANNFDDFAAALVTLWNLMVVNNWQVFLDAYRRYSG-PWSKIYFVLWWLVSSVI 684
Query: 653 LLNLVIAFVLEAFFAEMELES 673
+NL +A +LE F + + S
Sbjct: 685 WVNLFLALILENFLHKWDPRS 705
>sp|A0JMD4|TPC2_DANRE Two pore calcium channel protein 2 OS=Danio rerio GN=tpcn2 PE=2
SV=1
Length = 774
Score = 118 bits (295), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 136/615 (22%), Positives = 264/615 (42%), Gaps = 88/615 (14%)
Query: 139 EGITLVILIIHTFFPITYEGSPIFWKSTYTRLKVLCLLILV-ADFLVYGLYLSPIAFNFL 197
EGI +V L I +T +G I W+ +L LI++ A + + L +S +
Sbjct: 140 EGIEIVCLCIF-ILDVTAKGYLIGWEEFRMNKWLLAYLIVITASVIDWMLSISMLCDE-- 196
Query: 198 PLRIAPYIRVVFFILNIRQLRDTLFVLAGMLGTYLNVLALGLLFLLFSSWLAYVIF---E 254
LR+ IR F + N ++ TL + L +V+ L L + + + +IF +
Sbjct: 197 NLRVRRLIRPFFLLQNSSLMKKTLKCIKRTLPEIASVILLLALHICLFTMIGMLIFAKSD 256
Query: 255 DTVQ----------------------------DVWIPAYKASRWYCLFFVLYVLIGVYFV 286
D Q DV IPAY +R Y +FF+L+ + G Y +
Sbjct: 257 DPKQNGEWQTYFRNLPKALSSLLVLLTTANNPDVMIPAYSLNRGYSIFFILFSVFGTYLL 316
Query: 287 TNLILAVVYDSFKSQLAKQVSEMDRMRRRTLGKAFNLIDNYNVGFLNKEQ-------CIK 339
NL+ A++Y+ F+ L V RR + AF ++ G + + +
Sbjct: 317 MNLMTAIIYNQFRGYLLMSVQTSIIRRRLGIRAAFEVLCCPGRGHTSTQAEGHVERVAVS 376
Query: 340 LFEELNKYRTLPNISREEFELIFDELDDTHDFKINLDEFADLCNAIALRFQKEDVPSCFE 399
+F ++ + + + R+ I D I+ ++F L N + F KE P
Sbjct: 377 MFLKVMERVHMKSYCRQA---IVKAARRFPDGFISGEDFQRLFNELDKDFVKEHPPK--- 430
Query: 400 NLPSIYHSPFSEKLKAFIRSTKFGYMISI----ILIVNLVAVIVETTLDIQESSLQSVW- 454
+S I+ Y IS+ + + N++ + L+ ++S+ + +
Sbjct: 431 -------PEYSSSGLQHIQYVYSHYYISVLGNAVALANVICICTVLVLNAEKSASEKNYF 483
Query: 455 --QEVEFVFGWIYVLEMALKIYSYGFENYWRDGQNRFD-FLVTWVIVIGETITLA----- 506
+ + +F Y++EM LKI ++G++ Y N FD FL ++ I I +
Sbjct: 484 YMEIINCIFILYYLIEMLLKIVAFGWKGYLSYRNNIFDGFLTVLLLAIQIVIFITFKIPY 543
Query: 507 ---SPNGQTFLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIF 563
P + ++ E IR + + + R +R++ ++ +T + L+ +L + G +
Sbjct: 544 VDVDPVPRHVMALWEMIRLVNMLIVFRFLRIIPEIKLMAVVASTIVDLVKNLRAFAGILL 603
Query: 564 CVQCIYCSLGVQIFGGIVN----------------AGNAKLEETDLADDDYLLFNFNDYP 607
V ++ LG+ +F G ++ G +E +Y NF+D+
Sbjct: 604 VVYYMFAVLGIWLFQGAISPPSNMSLVSNSSLENITGPYSMECGTFEQLEYWPNNFDDFA 663
Query: 608 NGMVTLFNLLVMGNWQVWMQSYKELTGTAWTLAYFVSFYLITVLLLLNLVIAFVLEAFFA 667
+ ++ L+N++V+ NW V+ +Y T T W+L YFV ++L + ++ +NL +A +LE F
Sbjct: 664 SSLILLYNIMVVNNWHVFTDAYARYT-TDWSLVYFVVWWLTSSVMWVNLFVALILENFTY 722
Query: 668 EMELESSEKCEEEDK 682
+ + + E+ ++
Sbjct: 723 KWDRSNGLSVEDVER 737
>sp|O57483|CAC1S_LITCT Voltage-dependent L-type calcium channel subunit alpha-1S
OS=Lithobates catesbeiana PE=2 SV=1
Length = 1688
Score = 88.6 bits (218), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 105/452 (23%), Positives = 200/452 (44%), Gaps = 64/452 (14%)
Query: 261 WIPAYKASRWYCLFFVLYVLIGVYFVTNLILAVVYDSFKSQLAKQVSEMDRMRRRTLGKA 320
W+ + W ++FV +L+G +FV NL+L V+ F + R + ++ G A
Sbjct: 298 WVNDAIGNEWPWIYFVSLILLGSFFVLNLVLGVLSGEFTKE---------REKAKSRG-A 347
Query: 321 FNLIDNYNVGFLNKEQCIKLFEELNKYRTLPNISREEFELIFDELDDTHDFKINLDEFAD 380
F + L ++Q + E+L Y L I+ E + D + D L+E
Sbjct: 348 FQM--------LREQQAMD--EDLRGY--LDWITHAE---VMDPDMEPRDGFSQLEEGGS 392
Query: 381 LCNAIALRFQKEDVPS--CFENLPSIYHSPFSEKLKAFIRSTKFGYMISIILIVNLVAVI 438
+++ ++ E + F ++H K + ++S F +++ II+++N VI
Sbjct: 393 ETDSL---YEIEGINKFIAFFRQWRLWHRLLRRKSRDLVKSRFFYWLVIIIILLN--TVI 447
Query: 439 VETTLDIQESSLQSVWQEVEFVFGWIYVLEMALKIYSYGFENYWRDGQNRFDFLVTWVIV 498
+ T Q SL V ++ +EM +KIY+ GF++Y+ NRFD ++V+
Sbjct: 448 IATEHHHQPDSLTKAQDIANEVLLALFTMEMIVKIYALGFQSYFMSLFNRFD---SFVVC 504
Query: 499 IG--ETITLASPNGQTFLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLM 556
G E + +AS + + I L R+LR+ ++ + VA+ L + S+
Sbjct: 505 TGLLEVMLVASD-----IMSPLGISVLRCIRLLRIFKITRYWTSLNNLVASLLNSVRSIA 559
Query: 557 PYLGTIFCVQCIYCSLGVQIFGGIVNAGNAKLEETDLADDDYLLFNFNDYPNGMVTLFNL 616
L +F I+ LG+Q+FGG + D D + F+ +P ++T+F +
Sbjct: 560 SLLLLLFLFMIIFALLGMQMFGG----------KFDFEDLEVRRSTFDTFPQALITVFQI 609
Query: 617 LVMGNWQVWM----QSYKELTGTAWTLA-YFVSFYLITVLLLLNLVIAFVLEAFFAEMEL 671
L +W M +Y T + ++ YF+ ++ +LLN+ +A ++ L
Sbjct: 610 LTGEDWTAVMYNGIMAYGGPTYSGMSVCIYFIILFVCGNYILLNVFLAIAVDNLAEAENL 669
Query: 672 ESSEKCEEEDKDGEPRERRRRVGTKTRSQKVD 703
S++K + E ER+R+ + K +
Sbjct: 670 TSAQKAKAE-------ERKRKKLARANPDKTE 694
Score = 77.0 bits (188), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 131/290 (45%), Gaps = 46/290 (15%)
Query: 404 IYHSPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGW 463
I +P K+ + S+ F Y++ ++ +N +++ ++ E S S V F
Sbjct: 1100 IPKNPHQYKIWYVVTSSYFEYLMFFLITLNTISLGMQHYGQTAEFSYMSDILNVAFT--G 1157
Query: 464 IYVLEMALKIYSYGFENYWRDGQNRFDFLVTWVIVIGETITL-----------ASPNGQT 512
I+ +EM LK+ ++ + Y+ D N FDFL IVIG I + A+P +
Sbjct: 1158 IFTVEMFLKLAAFKAKGYFGDPWNVFDFL----IVIGSVIDVILSEIDTPGIPATPGAEE 1213
Query: 513 FLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGT-IFCVQCIYCS 571
S+ I + L R+LRL++LL + R + TF+ +L PY+ I + IY
Sbjct: 1214 --SSRISITFFRLFRVLRLVKLLSRGEGVRTLLWTFIKSFQAL-PYVALLIVMLFFIYAV 1270
Query: 572 LGVQIFGGIVNAGNAKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQ--VWMQSY 629
+G+Q+FG I + NF +P ++ LF WQ + SY
Sbjct: 1271 IGMQVFGKIALVDGTHINRNS---------NFQTFPQAVLLLFRCATGEAWQEILLACSY 1321
Query: 630 KELT--------------GTAWTLAYFVSFYLITVLLLLNLVIAFVLEAF 665
+L GT++ YF+SFY++ L++NL +A +++ F
Sbjct: 1322 GKLCDPMSDFQPGEEYTCGTSFAYFYFISFYMLCAFLIINLFVAVIMDNF 1371
Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 137/314 (43%), Gaps = 51/314 (16%)
Query: 406 HSPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQES-SLQSVWQEVEFVFGWI 464
+PF + + F +I + + N VA+ + + ++ S SV ++VE++F +I
Sbjct: 37 QNPFRKFCINIVEWKPFEMIILLTIFANCVALAIFLPMPEDDTNSTNSVLEKVEYIFLFI 96
Query: 465 YVLEMALKIYSYGF----ENYWRDGQNRFDFLVTWVIV-------IGETITLASPNGQTF 513
+ +E LKI +YGF + Y R+G N DF + V V I + L +P
Sbjct: 97 FTIESFLKIVAYGFILHTDAYLRNGWNILDFTIVSVGVFSVLLEQISKLQGLPAPGK--- 153
Query: 514 LSNGEWIRYLLLARMLRLIRLLMHVQQYRGFVATFL-TLIPSLMPYLGTIFCVQCIYCSL 572
S+G ++ L R+LR +RL+ V + + + + +IP L L +F + IY +
Sbjct: 154 -SSGFNVKALRAFRVLRPLRLVSGVPSLQVVLNSIIKAMIPLLHIALLVLFMI-IIYAIV 211
Query: 573 GVQIFGGIVNAGNAKLEETDLA---DDDYL-----------------------------L 600
G+++F G ++ ++TD+ D++ +
Sbjct: 212 GLELFSGKMHK-TCYFKDTDITATVDNEKPAPCSSTGQGRQCSINGSECRGWWPGPNNGI 270
Query: 601 FNFNDYPNGMVTLFNLLVMGNWQVWMQSYKELTGTAWTLAYFVSFYLITVLLLLNLVIAF 660
+F+++ M+T++ + M W + + G W YFVS L+ +LNLV+
Sbjct: 271 THFDNFGFAMLTVYQCITMEGWTEVLYWVNDAIGNEWPWIYFVSLILLGSFFVLNLVLGV 330
Query: 661 VLEAFFAEMELESS 674
+ F E E S
Sbjct: 331 LSGEFTKEREKAKS 344
Score = 60.8 bits (146), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 96/479 (20%), Positives = 197/479 (41%), Gaps = 88/479 (18%)
Query: 272 CLFFVLYVLIGVYFVTNLILAVVYDSF---KSQLAKQVSEMDRMRRRTLGKAFNLIDNYN 328
C++F++ + G Y + N+ LA+ D+ ++ + Q ++ + +R+ L +A
Sbjct: 637 CIYFIILFVCGNYILLNVFLAIAVDNLAEAENLTSAQKAKAEERKRKKLARANPDKTEEE 696
Query: 329 VGFLNKEQCIKLFEELNKYRTLPNISR---EEFELIFDELDDTH---DFK------INLD 376
L K+ E+ K +P +R +EFE +E+ D + DF
Sbjct: 697 KLLLAKK------EQKAKGEGIPTTARLKIDEFESNVNEIKDPYPSADFPGDDEEEEPEI 750
Query: 377 EFADLCNAIA-LRFQKEDVPSCFENLPSIYHSPFSEKLKAF----IRSTKFGYMISIILI 431
+ +A L+ +++ VP S + + K++ I +T F I + ++
Sbjct: 751 PISPRPRPLAELQLKEKAVP--MPEASSFFIFSPTNKIRVLCHRIINATTFTNFILLFIL 808
Query: 432 VNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLEMALKIYSYGF----ENYWRDGQN 487
++ +++ E + ES V +++ VF I+ E+ LK+ +YG ++ R+ N
Sbjct: 809 LSSISLAAEDPIQ-PESFRNKVLSKLDIVFTVIFTTEIVLKMTAYGAFLHKGSFCRNSFN 867
Query: 488 RFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFVAT 547
D V V +I I ++ I + + R+LR++R L + + +G
Sbjct: 868 ILDLSVVGVSLISMGIESSA------------ISVVKILRVLRVLRPLRAINRAKGLKHV 915
Query: 548 FLTLIPSLMPYLGTIFCV----QCIYCSLGVQIFGG---------------------IVN 582
L ++ +G I V Q ++ +GVQ+F G +
Sbjct: 916 VQCLFVAI-KTIGNIVLVTTLLQFMFSCIGVQLFKGKFYSCTDTTKITADECRGYFFVAK 974
Query: 583 AGNAKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWM----QSYKELTGTAWT 638
GN E + F+F++ +GM++LF + W + S+ E G +
Sbjct: 975 DGNPAHMEAVPRVWSHSDFHFDNVLSGMMSLFTISTFEGWPQLLYRAIDSHAEDMGPIYN 1034
Query: 639 -----LAYFVSFYLITVLLLLNLVIAFVLEAFFAEMELESSEKCEEEDKDGEPRERRRR 692
+F+ + ++ ++N+ + FV+ F E+ E+E KD E + +R+
Sbjct: 1035 YRIEIAVFFIVYIILIAFFMMNIFVGFVIVTF--------QEQGEQEYKDCELDKNQRQ 1085
>sp|Q00975|CAC1B_HUMAN Voltage-dependent N-type calcium channel subunit alpha-1B OS=Homo
sapiens GN=CACNA1B PE=1 SV=1
Length = 2339
Score = 85.9 bits (211), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 104/428 (24%), Positives = 181/428 (42%), Gaps = 48/428 (11%)
Query: 270 WYCLFFVLYVLIGVYFVTNLILAVVYDSFKSQLAKQVSEMDRMRRRTLGKAFNLIDNYNV 329
W L+F+ ++IG +F+ NL+L V+ F + + + ++ R + ++ Y
Sbjct: 331 WNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVENRRAFLKLRRQQQIERELNGYLE 390
Query: 330 GFLNKEQCIKLFEELNKYRTLP-------NISREEFELIFDELDDTHDFKINLDEFADLC 382
E+ + E+ N P + +LI E + D FADLC
Sbjct: 391 WIFKAEEVMLAEEDRNAEEKSPLDVLKRAATKKSRNDLIHAEEGE--------DRFADLC 442
Query: 383 NAIALRFQKEDVPSCFENLPSIYHSPFSEKL-----KAFIRSTKFGYMISIILIVNLVAV 437
A+ F + + S S + EK+ + +++ F +++ + +V L +
Sbjct: 443 -AVGSPFARASLKSGKTESSSYFRR--KEKMFRFFIRRMVKAQSFYWVV--LCVVALNTL 497
Query: 438 IVETTLDIQESSLQSVWQEVEFVFGWIYVLEMALKIYSYGFENYWRDGQNRFDFLVTWVI 497
V Q L + EFVF +++ EM+LK+Y G +Y+R N FDF V V
Sbjct: 498 CVAMVHYNQPRRLTTTLYFAEFVFLGLFLTEMSLKMYGLGPRSYFRSSFNCFDFGVI-VG 556
Query: 498 VIGETITLASPNGQTFLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMP 557
+ E + A G +F I L R+LR+ ++ + R V + L + S++
Sbjct: 557 SVFEVVWAAIKPGSSF-----GISVLRALRLLRIFKVTKYWSSLRNLVVSLLNSMKSIIS 611
Query: 558 YLGTIFCVQCIYCSLGVQIFGGIVNAGNAKLEETDLADDDYLLFNFNDYPNGMVTLFNLL 617
L +F ++ LG+Q+FGG N D+ NF+ +P ++T+F +L
Sbjct: 612 LLFLLFLFIVVFALLGMQLFGGQFN-----------FQDETPTTNFDTFPAAILTVFQIL 660
Query: 618 VMGNWQVWMQSYKELTGTAWTLAYFVSFYLITVLL-----LLNLVIAFVLEAFFAEMELE 672
+W M E G + F SFY I + L LLN+ +A ++ EL
Sbjct: 661 TGEDWNAVMYHGIESQG-GVSKGMFSSFYFIVLTLFGNYTLLNVFLAIAVDNLANAQELT 719
Query: 673 SSEKCEEE 680
E+ EE
Sbjct: 720 KDEEEMEE 727
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 119/272 (43%), Gaps = 35/272 (12%)
Query: 409 FSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLE 468
F K F+ S F Y I ++ +N V ++++ E L + + + VF ++ +E
Sbjct: 1460 FQYKTWTFVVSPPFEYFIMAMIALNTVVLMMKFYDAPYEYEL--MLKCLNIVFTSMFSME 1517
Query: 469 MALKIYSYGFENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARM 528
LKI ++G NY+RD N FDF VT + I + + F++ + +L L R
Sbjct: 1518 CVLKIIAFGVLNYFRDAWNVFDF-VTVLGSITDILVTEIAETNNFIN----LSFLRLFRA 1572
Query: 529 LRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQ-CIYCSLGVQIFGGIVNAGNAK 587
RLI+LL R + TF+ +L PY+ + + IY +G+Q+FG I
Sbjct: 1573 ARLIKLLRQGYTIRILLWTFVQSFKAL-PYVCLLIAMLFFIYAIIGMQVFGNIA------ 1625
Query: 588 LEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWM--------------QSYKELT 633
DDD + N++ + L L + W Q+
Sbjct: 1626 ------LDDDTSINRHNNFRTFLQALMLLFRSATGEAWHEIMLSCLSNQACDEQANATEC 1679
Query: 634 GTAWTLAYFVSFYLITVLLLLNLVIAFVLEAF 665
G+ + YFVSF + L+LNL +A +++ F
Sbjct: 1680 GSDFAYFYFVSFIFLCSFLMLNLFVAVIMDNF 1711
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 109/281 (38%), Gaps = 45/281 (16%)
Query: 422 FGYMISIILIVNLVAVIVETTL-DIQESSLQSVWQEVEFVFGWIYVLEMALKIYSYGF-- 478
F YMI +I N + + +E L D ++ + + E F I+ E +KI + GF
Sbjct: 97 FEYMILATIIANCIVLALEQHLPDGDKTPMSERLDDTEPYFIGIFCFEAGIKIIALGFVF 156
Query: 479 --ENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARMLRLIRLLM 536
+Y R+G N DF+V ++ G F +R L R+LR ++L+
Sbjct: 157 HKGSYLRNGWNVMDFVVVLTGILATA-------GTDFD-----LRTLRAVRVLRPLKLVS 204
Query: 537 HVQQYRGFVATFLTLIPSLMP-------------------YLGTIFCVQCIYCSLGVQIF 577
+ + + + + + L+ Y+G F C S +
Sbjct: 205 GIPSLQVVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLEFYMGK-FHKACFPNSTDAEPV 263
Query: 578 GGIV--NAGNAKLEETDL------ADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWMQSY 629
G A+L E D ++ + NF++ ++T+F + M W + +
Sbjct: 264 GDFPCGKEAPARLCEGDTECREYWPGPNFGITNFDNILFAILTVFQCITMEGWTDILYNT 323
Query: 630 KELTGTAWTLAYFVSFYLITVLLLLNLVIAFVLEAFFAEME 670
+ G W YF+ +I +LNLV+ + F E E
Sbjct: 324 NDAAGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERE 364
>sp|Q02294|CAC1B_RAT Voltage-dependent N-type calcium channel subunit alpha-1B OS=Rattus
norvegicus GN=Cacna1b PE=1 SV=1
Length = 2336
Score = 84.3 bits (207), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 101/422 (23%), Positives = 180/422 (42%), Gaps = 35/422 (8%)
Query: 270 WYCLFFVLYVLIGVYFVTNLILAVVYDSFKSQLAKQVSEMDRMRRRTLGKAFNLIDNYNV 329
W L+F+ ++IG +F+ NL+L V+ F + + + ++ R + ++ Y
Sbjct: 331 WNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVENRRAFLKLRRQQQIERELNGYLE 390
Query: 330 GFLNKEQCIKLFEELNKYRTLPNISREEFELIFDELDDTHDFKINLDEFADLCNA----- 384
E+ + E+ N P + + +D + D F DLC A
Sbjct: 391 WIFKAEEVMLAEEDKNAEEKSPLDAVLKRAATKKSRNDLIHAEEGEDRFVDLCAAGSPFA 450
Query: 385 -IALRFQKEDVPSCFENLPSIYHSPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTL 443
+L+ K + S F + F ++ +++ F +++ ++ +N + V +
Sbjct: 451 RASLKSGKTESSSYFRRKEKM----FRFLIRRMVKAQSFYWVVLCVVALNTLCVAM--VH 504
Query: 444 DIQESSLQSVWQEVEFVFGWIYVLEMALKIYSYGFENYWRDGQNRFDFLVTWVIVIGETI 503
Q L + EFVF +++ EM+LK+Y G +Y+R N FDF V V I E +
Sbjct: 505 YNQPQRLTTALYFAEFVFLGLFLTEMSLKMYGLGPRSYFRSSFNCFDFGVI-VGSIFEVV 563
Query: 504 TLASPNGQTFLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIF 563
A G +F I L R+LR+ ++ + R V + L + S++ L +F
Sbjct: 564 WAAIKPGTSF-----GISVLRALRLLRIFKVTKYWNSLRNLVVSLLNSMKSIISLLFLLF 618
Query: 564 CVQCIYCSLGVQIFGGIVNAGNAKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQ 623
++ LG+Q+FGG N D+ NF+ +P ++T+F +L +W
Sbjct: 619 LFIVVFALLGMQLFGGQFN-----------FQDETPTTNFDTFPAAILTVFQILTGEDWN 667
Query: 624 VWMQSYKELTGTAWTLAYFVSFYLITVLL-----LLNLVIAFVLEAFFAEMELESSEKCE 678
M E G + F SFY I + L LLN+ +A ++ EL E+
Sbjct: 668 AVMYHGIESQG-GVSKGMFSSFYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDEEEM 726
Query: 679 EE 680
EE
Sbjct: 727 EE 728
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 119/270 (44%), Gaps = 33/270 (12%)
Query: 409 FSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLE 468
F K F+ S F Y I ++ +N V ++++ E L + + + VF ++ LE
Sbjct: 1462 FQYKTWTFVVSPPFEYFIMAMIALNTVVLMMKFYDAPYEYEL--MLKCLNIVFTSMFSLE 1519
Query: 469 MALKIYSYGFENYWRDGQNRFDFLVTWVIVIGE-TITLASPNGQTFLSNGEWIRYLLLAR 527
LKI ++G NY+RD N FDF V V+G T L + F++ + +L L R
Sbjct: 1520 CILKIIAFGVLNYFRDAWNVFDF----VTVLGSITDILVTEIANNFIN----LSFLRLFR 1571
Query: 528 MLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQ-CIYCSLGVQIFGGIVNAGNA 586
RLI+L R + TF+ +L PY+ + + IY +G+Q+FG I
Sbjct: 1572 AARLIKLCRQGYTIRILLWTFVQSFKAL-PYVCLLIAMLFFIYAIIGMQVFGNIALDDGT 1630
Query: 587 KLEETDLADDDYLLFNFNDYPNGMVTLFN-----------LLVMGNWQVWMQSYKELTGT 635
+ + NF + ++ LF L +GN + G+
Sbjct: 1631 SINRHN---------NFRTFLQALMLLFRSATGEAWHEIMLSCLGNRACDPHANASECGS 1681
Query: 636 AWTLAYFVSFYLITVLLLLNLVIAFVLEAF 665
+ YFVSF + L+LNL +A +++ F
Sbjct: 1682 DFAYFYFVSFIFLCSFLMLNLFVAVIMDNF 1711
Score = 57.4 bits (137), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 116/280 (41%), Gaps = 43/280 (15%)
Query: 422 FGYMISIILIVNLVAVIVETTL-DIQESSLQSVWQEVEFVFGWIYVLEMALKIYSYGF-- 478
F YMI +I N + + +E L D ++ + + E F I+ E +KI + GF
Sbjct: 97 FEYMILATIIANCIVLALEQHLPDGDKTPMSERLDDTEPYFIGIFCFEAGIKIIALGFVF 156
Query: 479 --ENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARMLRLIRLLM 536
+Y R+G N DF V+V+ E + A G F +R L R+LR ++L+
Sbjct: 157 HKGSYLRNGWNVMDF----VVVLTEILATA---GTDFD-----LRTLRAVRVLRPLKLVS 204
Query: 537 HVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGG------IVNAGNA---- 586
+ + + + + + L+ +F ++ +G++ + G N+ +A
Sbjct: 205 GIPSLQVVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLEFYMGKFHKACFPNSTDAEPVG 264
Query: 587 -----KLEETDLADDD-----------YLLFNFNDYPNGMVTLFNLLVMGNWQVWMQSYK 630
K L D D + + NF++ ++T+F + M W + +
Sbjct: 265 DFPCGKEAPARLCDSDTECREYWPGPNFGITNFDNILFAILTVFQCITMEGWTDILYNTN 324
Query: 631 ELTGTAWTLAYFVSFYLITVLLLLNLVIAFVLEAFFAEME 670
+ G W YF+ +I +LNLV+ + F E E
Sbjct: 325 DAAGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERE 364
>sp|O55017|CAC1B_MOUSE Voltage-dependent N-type calcium channel subunit alpha-1B OS=Mus
musculus GN=Cacna1b PE=1 SV=1
Length = 2327
Score = 84.3 bits (207), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 103/428 (24%), Positives = 181/428 (42%), Gaps = 48/428 (11%)
Query: 270 WYCLFFVLYVLIGVYFVTNLILAVVYDSFKSQLAKQVSEMDRMRRRTLGKAFNLIDNYNV 329
W L+F+ ++IG +F+ NL+L V+ F + + + ++ R + ++ Y
Sbjct: 331 WNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVENRRAFLKLRRQQQIERELNGYLE 390
Query: 330 GFLNKEQCIKLFEELNKYRTLP-------NISREEFELIFDELDDTHDFKINLDEFADLC 382
E+ + E+ N P + +LI E + D F DLC
Sbjct: 391 WIFKAEEVMLAEEDKNAEEKSPLDVLKRAATKKSRNDLIHAEEGE--------DRFVDLC 442
Query: 383 NAIALRFQKEDVPSCFENLPSIYHSPFSEKL-----KAFIRSTKFGYMISIILIVNLVAV 437
A+ F + + S S + EK+ + +++ F +++ ++ +N + V
Sbjct: 443 -AVGSPFARASLKSGKTESSSYFRR--KEKMFRFFIRRMVKAQSFYWVVLCVVALNTLCV 499
Query: 438 IVETTLDIQESSLQSVWQEVEFVFGWIYVLEMALKIYSYGFENYWRDGQNRFDFLVTWVI 497
+ Q L + EFVF +++ EM+LK+Y G +Y+R N FDF V V
Sbjct: 500 AM--VHYNQPQRLTTALYFAEFVFLGLFLTEMSLKMYGLGPRSYFRSSFNCFDFGVI-VG 556
Query: 498 VIGETITLASPNGQTFLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMP 557
I E + A G +F I L R+LR+ ++ + R V + L + S++
Sbjct: 557 SIFEVVWAAIKPGTSF-----GISVLRALRLLRIFKVTKYWNSLRNLVVSLLNSMKSIIS 611
Query: 558 YLGTIFCVQCIYCSLGVQIFGGIVNAGNAKLEETDLADDDYLLFNFNDYPNGMVTLFNLL 617
L +F ++ LG+Q+FGG N D+ NF+ +P ++T+F +L
Sbjct: 612 LLFLLFLFIVVFALLGMQLFGGQFN-----------FQDETPTTNFDTFPAAILTVFQIL 660
Query: 618 VMGNWQVWMQSYKELTGTAWTLAYFVSFYLITVLL-----LLNLVIAFVLEAFFAEMELE 672
+W M E G + F SFY I + L LLN+ +A ++ EL
Sbjct: 661 TGEDWNAVMYHGIESQG-GVSKGMFSSFYFIVLTLFGNYTLLNVFLAIAVDNLANAQELT 719
Query: 673 SSEKCEEE 680
E+ EE
Sbjct: 720 KDEEEMEE 727
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 122/273 (44%), Gaps = 39/273 (14%)
Query: 409 FSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLE 468
F K F+ S F Y I ++ +N V ++++ E L + + + VF ++ +E
Sbjct: 1453 FQYKTWTFVVSPPFEYFIMAMIALNTVVLMMKFYDAPYEYEL--MLKCLNIVFTSMFSME 1510
Query: 469 MALKIYSYGFENYWRDGQNRFDFLVTWVIVIGE-TITLASPNGQTFLSNGEWIRYLLLAR 527
LKI ++G NY+RD N FDF V V+G T L + F++ + +L L R
Sbjct: 1511 CILKIIAFGVLNYFRDAWNVFDF----VTVLGSITDILVTEIANNFIN----LSFLRLFR 1562
Query: 528 MLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQ-CIYCSLGVQIFGGIVNAGNA 586
RLI+LL R + TF+ +L PY+ + + IY +G+Q+FG I
Sbjct: 1563 AARLIKLLRQGYTIRILLWTFVQSFKAL-PYVCLLIAMLFFIYAIIGMQVFGNIA----- 1616
Query: 587 KLEETDLADDDYLL---FNFNDYPNGMVTLFN-----------LLVMGNWQVWMQSYKEL 632
DDD + NF + ++ LF L +GN +
Sbjct: 1617 -------LDDDTSINRHNNFRTFLQALMLLFRSATGEAWHEIMLSCLGNRACDPHANASE 1669
Query: 633 TGTAWTLAYFVSFYLITVLLLLNLVIAFVLEAF 665
G+ + YFVSF + L+LNL +A +++ F
Sbjct: 1670 CGSDFAYFYFVSFIFLCSFLMLNLFVAVIMDNF 1702
Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/281 (20%), Positives = 108/281 (38%), Gaps = 45/281 (16%)
Query: 422 FGYMISIILIVNLVAVIVETTL-DIQESSLQSVWQEVEFVFGWIYVLEMALKIYSYGF-- 478
F YMI +I N + + +E L D ++ + + E F I+ E +KI + GF
Sbjct: 97 FEYMILATIIANCIVLALEQHLPDGDKTPMSERLDDTEPYFIGIFCFEAGIKIIALGFVF 156
Query: 479 --ENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARMLRLIRLLM 536
+Y R+G N DF+V ++ G F +R L R+LR ++L+
Sbjct: 157 HKGSYLRNGWNVMDFVVVLTGILATA-------GTDFD-----LRTLRAVRVLRPLKLVS 204
Query: 537 HVQQYRGFVATFLTLIPSLMP-------------------YLGTIFCVQCIYCSLGVQIF 577
+ + + + + + L+ Y+G F C S +
Sbjct: 205 GIPSLQVVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLEFYMGK-FHKACFPNSTDTEPV 263
Query: 578 GGIVNAGNAKLEETDLADD--------DYLLFNFNDYPNGMVTLFNLLVMGNWQVWMQSY 629
G + + D + ++ + NF++ ++T+F + M W + +
Sbjct: 264 GDFPCGKDPPARQCDGDTECREYWPGPNFGITNFDNILFAILTVFQCITMEGWTDILYNT 323
Query: 630 KELTGTAWTLAYFVSFYLITVLLLLNLVIAFVLEAFFAEME 670
+ G W YF+ +I +LNLV+ + F E E
Sbjct: 324 NDAAGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERE 364
>sp|O60840|CAC1F_HUMAN Voltage-dependent L-type calcium channel subunit alpha-1F OS=Homo
sapiens GN=CACNA1F PE=1 SV=2
Length = 1977
Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 134/283 (47%), Gaps = 33/283 (11%)
Query: 404 IYHSPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGW 463
I +P ++ A + S F Y++ +++++N VA+ ++ Q + + VF
Sbjct: 1174 IPKNPHQYRVWATVNSAAFEYLMFLLILLNTVALAMQHYE--QTAPFNYAMDILNMVFTG 1231
Query: 464 IYVLEMALKIYSYGFENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIR-- 521
++ +EM LKI ++ ++Y+ D N FD L+ ++ +T + G S+ + R
Sbjct: 1232 LFTIEMVLKIIAFKPKHYFTDAWNTFDALIVVGSIVDIAVTEVNNGGHLGESSEDSSRIS 1291
Query: 522 --YLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFC-VQCIYCSLGVQIFG 578
+ L R++RL++LL + R + TF+ +L PY+ + + IY +G+Q+FG
Sbjct: 1292 ITFFRLFRVMRLVKLLSKGEGIRTLLWTFIKSFQAL-PYVALLIAMIFFIYAVIGMQMFG 1350
Query: 579 GIVNAGNAKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWMQSY--------- 629
+ ++ + NF +P ++ LF WQ M +
Sbjct: 1351 KVALQDGTQINRNN---------NFQTFPQAVLLLFRCATGEAWQEIMLASLPGNRCDPE 1401
Query: 630 ------KELT-GTAWTLAYFVSFYLITVLLLLNLVIAFVLEAF 665
+E T G+ + +AYF+SF+++ L++NL +A +++ F
Sbjct: 1402 SDFGPGEEFTCGSNFAIAYFISFFMLCAFLIINLFVAVIMDNF 1444
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 106/262 (40%), Gaps = 23/262 (8%)
Query: 427 SIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLEMALKIYSYGFENYWRDGQ 486
+++L+V L + + + Q L + + V ++ +EM LK+Y G Y
Sbjct: 534 AVLLLVFLNTLTIASEHHGQPVWLTQIQEYANKVLLCLFTVEMLLKLYGLGPSAYVSSFF 593
Query: 487 NRFDFLVTWVIVIGET---ITLASPNGQTFLSNGEWIRYLLLARMLRLIRLLMHVQQYRG 543
NRFD V ++ T + P G I L R+LR+ ++ H
Sbjct: 594 NRFDCFVVCGGILETTLVEVGAMQPLG---------ISVLRCVRLLRIFKVTRHWASLSN 644
Query: 544 FVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAGNAKLEETDLADDDYLLFNF 603
VA+ L + S+ L +F I+ LG+Q+FGG N + + F
Sbjct: 645 LVASLLNSMKSIASLLLLLFLFIIIFSLLGMQLFGGKFNFDQTHTKRS----------TF 694
Query: 604 NDYPNGMVTLFNLLVMGNWQVWMQSYKELTGTAWTLAYFVSFYLITVLLLLNLVIAFVLE 663
+ +P ++T+F +L +W V M G + V Y I + + N ++ V
Sbjct: 695 DTFPQALLTVFQILTGEDWNVVMYDGIMAYGGPFFPGMLVCIYFIILFICGNYILLNVFL 754
Query: 664 AFFAEMELESSEKCEEEDKDGE 685
A + L S + +DK GE
Sbjct: 755 AIAVD-NLASGDAGTAKDKGGE 775
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 129/309 (41%), Gaps = 52/309 (16%)
Query: 407 SPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQES-SLQSVWQEVEFVFGWIY 465
+P + + F +I + + N VA+ V +S + ++VE+VF I+
Sbjct: 79 NPLRRSCISIVEWKPFDILILLTIFANCVALGVYIPFPEDDSNTANHNLEQVEYVFLVIF 138
Query: 466 VLEMALKIYSYGF----ENYWRDGQNRFDFLVTWVIVIG--ETITLASPN--GQTFLSNG 517
+E LKI +YG Y R+G N DF+ ++V+G + P G + G
Sbjct: 139 TVETVLKIVAYGLVLHPSAYIRNGWNLLDFI---IVVVGLFSVLLEQGPGRPGDAPHTGG 195
Query: 518 EW----IRYLLLARMLRLIRLLMHVQQYRGFVATFL-TLIPSLMPYLGTIFCVQCIYCSL 572
+ ++ L R+LR +RL+ V + + + L+P L L +F + IY +
Sbjct: 196 KPGGFDVKALRAFRVLRPLRLVSGVPSLHIVLNSIMKALVPLLHIALLVLFVI-IIYAII 254
Query: 573 GVQIFGG---------------------IVNAGNAK---LEETDL----ADDDYLLFNFN 604
G+++F G ++G+ + L +T+ + + NF+
Sbjct: 255 GLELFLGRMHKTCYFLGSDMEAEEDPSPCASSGSGRACTLNQTECRGRWPGPNGGITNFD 314
Query: 605 DYPNGMVTLFNLLVMGNWQ---VWMQSYKELTGTAWTLAYFVSFYLITVLLLLNLVIAFV 661
++ M+T+F + M W WMQ + G YFVS + +LNLV+ +
Sbjct: 315 NFFFAMLTVFQCVTMEGWTDVLYWMQ---DAMGYELPWVYFVSLVIFGSFFVLNLVLGVL 371
Query: 662 LEAFFAEME 670
F E E
Sbjct: 372 SGEFSKERE 380
Score = 35.8 bits (81), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 61/310 (19%), Positives = 120/310 (38%), Gaps = 53/310 (17%)
Query: 407 SPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYV 466
+P + I F +I + +I++ V++ E + S + ++ F I+
Sbjct: 858 NPLRKGCHTLIHHHVFTNLILVFIILSSVSLAAEDPIRAH-SFRNHILGYFDYAFTSIFT 916
Query: 467 LEMALKIYSYGF----ENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRY 522
+E+ LK+ +G ++ R N D LV V +I +F + I
Sbjct: 917 VEILLKMTVFGAFLHRGSFCRSWFNMLDLLVVSVSLI------------SFGIHSSAISV 964
Query: 523 LLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCV----QCIYCSLGVQIFG 578
+ + R+LR++R L + + +G + ++ +G I V Q ++ +GVQ+F
Sbjct: 965 VKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIR-TIGNIMIVTTLLQFMFACIGVQLFK 1023
Query: 579 GIVNAGNAKLEETDLADDDYLL---------------------FNFNDYPNGMVTLFNLL 617
G + + T L FNF++ + M+ LF +
Sbjct: 1024 GKFYTCTDEAKHTPQECKGSFLVYPDGDVSRPLVRERLWVNSDFNFDNVLSAMMALFTVS 1083
Query: 618 VMGNWQVWM----QSYKELTGTAWTLAYFVS-----FYLITVLLLLNLVIAFVLEAFFAE 668
W + +Y E G + +S + +I ++N+ + FV+ F A+
Sbjct: 1084 TFEGWPALLYKAIDAYAEDHGPIYNYRVEISVFFIVYIIIIAFFMMNIFVGFVIITFRAQ 1143
Query: 669 MELESSEKCE 678
E E + CE
Sbjct: 1144 GEQE-YQNCE 1152
>sp|Q25452|CAC1M_MUSDO Muscle calcium channel subunit alpha-1 OS=Musca domestica PE=2 SV=1
Length = 1687
Score = 80.9 bits (198), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 129/278 (46%), Gaps = 40/278 (14%)
Query: 416 FIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLEMALKIYS 475
F+ S+ F Y I +++++N V + ++ Q + + +F ++ LE K+ +
Sbjct: 1105 FVTSSSFEYSIFVLIMINTVTLAMK--FYKQPEYYSEILDALNMIFTAVFSLEFIFKLAA 1162
Query: 476 YGFENYWRDGQNRFDFLVTWV----IVIGETIT----LASPNGQTF--LSNGEW---IRY 522
+ F+NY+ D N FDF++ IV E T LA+ +GQ+ G I +
Sbjct: 1163 FRFKNYFGDAWNTFDFIIVLGSFIDIVYSEIKTKEQALATCDGQSCNKAKGGSTLISINF 1222
Query: 523 LLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLG-TIFCVQCIYCSLGVQIFGGIV 581
L R++RL++LL + R + TF+ +L PY+ I + IY +G+Q+FG I+
Sbjct: 1223 FRLFRVMRLVKLLSKGEGIRTLLWTFIKSFQAL-PYVALLIVMLFFIYAVIGMQVFGKIM 1281
Query: 582 NAGNAKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWMQSYKEL--------- 632
LEE D + NF +P ++ LF WQ M +
Sbjct: 1282 ------LEEGTSIDRNN---NFQTFPQAVLVLFRSATGEAWQEIMMACSPRDDVKCDPES 1332
Query: 633 -----TGTAWTLAYFVSFYLITVLLLLNLVIAFVLEAF 665
G++ YF+SFY++ L++NL +A +++ F
Sbjct: 1333 DAVNNCGSSIAFPYFISFYVLCSFLIINLFVAVIMDNF 1370
Score = 73.6 bits (179), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 138/292 (47%), Gaps = 41/292 (14%)
Query: 417 IRSTKFGYMISIILIVNLVAVIVETTLDIQESSL-QSVWQEVEFVFGWIYVLEMALKIYS 475
+ S F Y I + + N VA+ V T +S++ + +++E++F I+ E +KI +
Sbjct: 58 VDSKLFEYFILLTIFANCVALAVYTPYPSGDSNITNQMLEKIEYIFLVIFTSECVMKIIA 117
Query: 476 YGF----ENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARMLRL 531
YGF +Y R+G N DF +++VIG T S + G ++ L R+LR
Sbjct: 118 YGFVLHTGSYLRNGWNFLDF---FIVVIGMISTALS----NLVKEGFDVKALRAFRVLRP 170
Query: 532 IRLLMHVQQYRGFVATFL-TLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNA----GNA 586
+RL+ V + + + L +IP L L +F + IY +G+++F G ++ N
Sbjct: 171 LRLVSGVPSLQVVLNSILKAMIPLLHIALLVLFVI-IIYAIIGLELFSGKLHKTCRHSNT 229
Query: 587 KLEETDLAD-----------------DDYL-----LFNFNDYPNGMVTLFNLLVMGNWQV 624
DL + DD++ + NF+++ M+T+F + + W
Sbjct: 230 GEYLNDLDELHACGVGFKCPSGYECFDDWVGPNDGITNFDNFGLSMLTVFQCITLEGWTD 289
Query: 625 WMQSYKELTGTAWTLAYFVSFYLITVLLLLNLVIAFVLEAFFAEMELESSEK 676
+ S ++ G++W YFVS ++ ++NL++ VL F++ ++ +
Sbjct: 290 VLYSIQDAMGSSWEWIYFVSMVILGAFFVMNLILG-VLSGEFSKERTKAKNR 340
Score = 70.5 bits (171), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 100/424 (23%), Positives = 175/424 (41%), Gaps = 52/424 (12%)
Query: 267 ASRWYCLFFVLYVLIGVYFVTNLILAVVYDSFKSQLAKQVSEMDRMRRRTLGKAFNLIDN 326
S W ++FV V++G +FV NLIL V+ F + K + D + R
Sbjct: 299 GSSWEWIYFVSMVILGAFFVMNLILGVLSGEFSKERTKAKNRGDFQKLR----------- 347
Query: 327 YNVGFLNKEQCIKLFEELNKYRTLPNISR-EEFELIFDE--LDDTHDFKINLDEFADLCN 383
K+Q + E+L Y L I++ E+ E D ++D H K+ E + N
Sbjct: 348 ------EKQQ---IEEDLRGY--LDWITQAEDIEPDPDAQIIEDCHKNKVK--EVVSIDN 394
Query: 384 AIALRFQKEDVPSCFENLPSIY---HSPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVE 440
+ + S F + + + ++S F ++I IL+V L ++
Sbjct: 395 LKDHENETQQTDSWFRSQKKYLERINRRIRRACRKAVKSQAFYWLI--ILLVFLNTGVLA 452
Query: 441 TTLDIQESSLQSVWQEVEFVFGWIYVLEMALKIYSYGFENYWRDGQNRFDFLVTWVIVIG 500
T Q L + F ++ EM LK+YS GF+ Y+ NRFD V VIG
Sbjct: 453 TEHYRQPIWLDQFQEYTNIFFIALFTCEMILKMYSLGFQGYFVSLFNRFDCFV----VIG 508
Query: 501 ETITLASPNGQTFLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLG 560
+ + + G + L R+LR+ ++ + VA+ L I S+ L
Sbjct: 509 SISEMVLTSSELMAPLG--VSVLRCVRLLRVFKVTKYWHSLSNLVASLLNSIQSIASLLL 566
Query: 561 TIFCVQCIYCSLGVQIFGGIVNAGNAKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVMG 620
+F I+ LG+Q+FGG T +++ NF+ + ++T+F +L
Sbjct: 567 LLFLFIVIFGLLGMQVFGG---------RFTFKPEEEKPRSNFDSFYQSLLTVFQILTGE 617
Query: 621 NWQVWMQSYKELTGTAWTLA-----YFVSFYLITVLLLLNLVIAFVLEAFFAEMELESSE 675
+W V M G ++ Y++ ++ +LLN+ +A ++ L + E
Sbjct: 618 DWNVVMYDGIRAYGGVFSFGIVACIYYIILFICGNYILLNVFLAIAVDNLADADSLSTIE 677
Query: 676 KCEE 679
K +E
Sbjct: 678 KEDE 681
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 94/465 (20%), Positives = 174/465 (37%), Gaps = 92/465 (19%)
Query: 272 CLFFVLYVLIGVYFVTNLILAVVYDSFKS---------------QLAKQV-SEMDRMRRR 315
C+++++ + G Y + N+ LA+ D+ QL Q+ +EM+
Sbjct: 641 CIYYIILFICGNYILLNVFLAIAVDNLADADSLSTIEKEDESQIQLDNQIKNEMENEEYL 700
Query: 316 TLGKAFNLIDNYNVG---FLNKEQCIKLFEELNKYRTLPNISREEFELIFDELDDTHDFK 372
G + + +L E+C ++ N Y L + + L +
Sbjct: 701 QNGDHISFKAEFGADLDTYLQDEECGSYSDDENTYNKLGGVKQRVSSL------PRRNTN 754
Query: 373 INLDEFADLCNAIALRFQKEDVPSCFENLPSIYHSPFSEKLKAFIRSTKFGYMISIILIV 432
++D K+D+P + + F + FG I ++
Sbjct: 755 TDMDRI------------KKDIPYGTSFFIFSHTNRFRIFCHRLCNHSNFGNFILCCIMF 802
Query: 433 NLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLEMALKIYSYGF----ENYWRDGQNR 488
+ + E L ++S V + ++ F ++ +E+ LK+ SYGF + R N
Sbjct: 803 SSAMLAAENPLK-ADASRNIVLNKFDYFFTAVFTIELVLKLISYGFVLHDGAFCRSAFNL 861
Query: 489 FDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFVATF 548
D LV V +I + N I + + R+LR++R L + + +G
Sbjct: 862 LDLLVVCVSLI------------SIFFNSNAISVVKILRVLRVLRPLRAINRAKGLKHVV 909
Query: 549 LTLIPSLMPYLGTIFCVQCI----YCSLGVQIFGG--IVNAGNAKLEETDLADDDYLL-- 600
+I ++ +G I V C+ + +GVQ+F G + +K+ E+D YL
Sbjct: 910 QCVIVAVKT-IGNIVLVTCLLQFMFAVIGVQLFKGKFFSCSDGSKVYESD-CHGTYLFYE 967
Query: 601 ------------------FNFNDYPNGMVTLFNLLVMGNWQ----VWMQSYKELTGTAWT 638
F+F+D M+TLF + W V + S KE G +
Sbjct: 968 NGDINKPRLKEREWKNNKFHFDDVAKAMLTLFTVSTFEGWPTLLYVSIDSNKENGGPIYN 1027
Query: 639 LAYFV-----SFYLITVLLLLNLVIAFVLEAFFAEMELESSEKCE 678
V + +I ++N+ + FV+ F E E E + CE
Sbjct: 1028 FRPIVAAYYIIYIIIIAFFMVNIFVGFVIVTFQNEGEQE-YKNCE 1071
>sp|Q9JIS7|CAC1F_MOUSE Voltage-dependent L-type calcium channel subunit alpha-1F OS=Mus
musculus GN=Cacna1f PE=1 SV=1
Length = 1985
Score = 79.7 bits (195), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 134/283 (47%), Gaps = 33/283 (11%)
Query: 404 IYHSPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGW 463
I +P ++ A + S F Y++ +++++N VA+ ++ Q + + VF
Sbjct: 1179 IPKNPHQYRVWATVNSRAFEYLMFLLILLNTVALAMQHYE--QTAPFNYAMDILNMVFTG 1236
Query: 464 IYVLEMALKIYSYGFENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIR-- 521
++ +EM LKI ++ ++Y+ D N FD L+ V+ +T + G S+ + R
Sbjct: 1237 LFTIEMVLKIIAFKPKHYFADAWNTFDALIVVGSVVDIAVTEVNNGGHLGESSEDTSRIS 1296
Query: 522 --YLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFC-VQCIYCSLGVQIFG 578
+ L R++RL++LL + R + TF+ +L PY+ + + IY +G+Q+FG
Sbjct: 1297 ITFFRLFRVMRLVKLLSKGEGIRTLLWTFIKSFQAL-PYVALLIAMIFFIYAVIGMQMFG 1355
Query: 579 GIVNAGNAKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWMQSY--------- 629
+ ++ + NF +P ++ LF WQ M +
Sbjct: 1356 LVALQDGTQINRNN---------NFQTFPQAVLLLFRCATGEAWQEIMLASLPGNRCDPE 1406
Query: 630 ------KELT-GTAWTLAYFVSFYLITVLLLLNLVIAFVLEAF 665
+E T G+++ + YF+SF+++ L++NL +A +++ F
Sbjct: 1407 SDFGPGEEFTCGSSFAIVYFISFFMLCAFLIINLFVAVIMDNF 1449
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 128/309 (41%), Gaps = 52/309 (16%)
Query: 407 SPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQES-SLQSVWQEVEFVFGWIY 465
+P + + F +I + + N VA+ V +S + ++VE+VF I+
Sbjct: 79 NPIRRSCISIVEWKPFDILILLTIFANCVALGVYIPFPEDDSNTANHNLEQVEYVFLVIF 138
Query: 466 VLEMALKIYSYGF----ENYWRDGQNRFDFLVTWVIVIG--ETITLASPN--GQTFLSNG 517
+E LKI +YG Y R+G N DF+ ++V+G + P G + G
Sbjct: 139 TVETVLKIVAYGLVLHPSAYIRNGWNLLDFI---IVVVGLFSVLLEQGPGRPGDAPHTGG 195
Query: 518 EW----IRYLLLARMLRLIRLLMHVQQYRGFVATFL-TLIPSLMPYLGTIFCVQCIYCSL 572
+ ++ L R+LR +RL+ V V + + L+P L L +F + IY +
Sbjct: 196 KPGGFDVKALRAFRVLRPLRLVSGVPSLHIVVNSIMKALVPLLHIALLVLFVI-IIYAII 254
Query: 573 GVQIFGG---------------------IVNAGNAK---LEETDL----ADDDYLLFNFN 604
G+++F G ++G+ + L T+ + + NF+
Sbjct: 255 GLELFLGRMHKTCYFLGSDMEAEEDPSPCASSGSGRSCTLNHTECRGRWPGPNGGITNFD 314
Query: 605 DYPNGMVTLFNLLVMGNWQ---VWMQSYKELTGTAWTLAYFVSFYLITVLLLLNLVIAFV 661
++ M+T+F + M W WMQ + G YFVS + +LNLV+ +
Sbjct: 315 NFFFAMLTVFQCITMEGWTDVLYWMQ---DAMGYELPWVYFVSLVIFGSFFVLNLVLGVL 371
Query: 662 LEAFFAEME 670
F E E
Sbjct: 372 SGEFSKERE 380
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 110/271 (40%), Gaps = 32/271 (11%)
Query: 434 LVAVIVETTLDIQESSLQSVW--QEVEF---VFGWIYVLEMALKIYSYGFENYWRDGQNR 488
L+ V + T E Q +W Q E+ V ++ +EM LK+Y G Y NR
Sbjct: 536 LLLVFLNTLTIASEHHGQPLWLTQTQEYANKVLLCLFTVEMLLKLYGLGPSVYVASFFNR 595
Query: 489 FDFLVTWVIVIGET---ITLASPNGQTFLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFV 545
FD V ++ T + P G I L R+LR+ ++ H V
Sbjct: 596 FDCFVVCGGILETTLVEVGAMQPLG---------ISVLRCVRLLRIFKVTRHWASLSNLV 646
Query: 546 ATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAGNAKLEETDLADDDYLLFNFND 605
A+ L + S+ L +F I+ LG+Q+FGG N + + F+
Sbjct: 647 ASLLNSMKSIASLLLLLFLFIIIFSLLGMQLFGGKFNFDQTHTKRS----------TFDT 696
Query: 606 YPNGMVTLFNLLVMGNWQVWMQSYKELTGTAW-----TLAYFVSFYLITVLLLLNLVIAF 660
+P ++T+F +L +W V M G + YF+ ++ +LLN+ +A
Sbjct: 697 FPQALLTVFQILTGEDWNVVMYDGIMAYGGPFFPGMLVCVYFIILFICGNYILLNVFLAI 756
Query: 661 VLEAFFAEMELESSEKCEEEDKDGEPRERRR 691
++ + + +K E+ +G P + +
Sbjct: 757 AVDNLASGDAGTAKDKGREKSSEGNPPKENK 787
Score = 37.0 bits (84), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 62/312 (19%), Positives = 123/312 (39%), Gaps = 57/312 (18%)
Query: 407 SPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYV 466
+P + I F +I + +I++ V++ E + S + ++ F I+
Sbjct: 863 NPLRKACHTLIHHHIFTSLILVFIILSSVSLAAEDPIRAH-SFRNHILGYFDYAFTSIFT 921
Query: 467 LEMALKIYSYGF----ENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRY 522
+E+ LK+ +G ++ R N D LV V +I +F + I
Sbjct: 922 VEILLKMTVFGAFLHRGSFCRSWFNLLDLLVVSVSLI------------SFGIHSSAISV 969
Query: 523 LLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCV----QCIYCSLGVQIFG 578
+ + R+LR++R L + + +G + ++ +G I V Q ++ +GVQ+F
Sbjct: 970 VKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIR-TIGNIMIVTTLLQFMFACIGVQLFK 1028
Query: 579 G----IVNAGNAKLEETDLA-----DDDYLL------------FNFNDYPNGMVTLFNLL 617
G + L+E+ + D D FNF++ + M+ LF +
Sbjct: 1029 GKFYSCTDEAKHTLKESKGSFLIYPDGDVSRPLVRERLWVNSDFNFDNVLSAMMALFTVS 1088
Query: 618 VMGNWQVWMQSYKELTGTAWTLAYFVSFYL-----------ITVLLLLNLVIAFVLEAFF 666
W + YK + A ++++ I ++N+ + FV+ F
Sbjct: 1089 TFEGWPALL--YKAIDANAEDEGPIYNYHVEISVFFIVYIIIIAFFMMNIFVGFVIITFR 1146
Query: 667 AEMELESSEKCE 678
A+ E E + CE
Sbjct: 1147 AQGEQE-YQNCE 1157
>sp|Q05152|CAC1B_RABIT Voltage-dependent N-type calcium channel subunit alpha-1B
OS=Oryctolagus cuniculus GN=CACNA1B PE=1 SV=1
Length = 2339
Score = 79.3 bits (194), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 115/440 (26%), Positives = 179/440 (40%), Gaps = 71/440 (16%)
Query: 270 WYCLFFVLYVLIGVYFVTNLILAVVYDSFKSQLAKQVSEMDRMRRRTLGKAFNLIDNYNV 329
W L+F+ ++IG +F+ NL+L V+ F E +R+ R
Sbjct: 331 WNWLYFIPLIIIGSFFMLNLVLGVLSGEF-------AKERERVENRR------------- 370
Query: 330 GFLNKEQCIKLFEELNKYRTLPNISREEFELIFDELDDTHDFKINLDEFADLCNAIALR- 388
FL + ++ ELN Y L I + E E++ E D + K LD A R
Sbjct: 371 AFLKLRRQQQIERELNGY--LEWIFKAE-EVMLAEEDRNAEEKSPLDAVLKRAAAKKSRS 427
Query: 389 --FQKEDVPSCFENLPSIYHSPF---------SEKLKAFIRSTK-FGYMI---------- 426
Q E+ L SPF +E F R K F + I
Sbjct: 428 DLIQAEEGEGRLTGL-CAPGSPFARASLKSGKTESSSYFRRKEKMFRFFIRRMVKAQSFY 486
Query: 427 -SIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLEMALKIYSYGFENYWRDG 485
+++ +V L + V Q L + EFVF +++ EM+LK+Y G +Y+R
Sbjct: 487 WTVLCVVALNTLCVAMVHYNQPQRLTTALYFAEFVFLGLFLTEMSLKMYGLGPRSYFRSS 546
Query: 486 QNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFV 545
N FDF V V I E + A G +F I L R+LR+ ++ + R V
Sbjct: 547 FNCFDFGVI-VGSIFEVVWAAVKPGTSF-----GISVLRALRLLRIFKVTKYWNSLRNLV 600
Query: 546 ATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAGNAKLEETDLADDDYLLFNFND 605
+ L + S++ L +F ++ LG+Q+FGG N D+ NF+
Sbjct: 601 VSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFN-----------FKDETPTTNFDT 649
Query: 606 YPNGMVTLFNLLVMGNWQVWMQSYKELTGTAWTLAYFVSFYLITVLL-----LLNLVIAF 660
+P ++T+F +L +W M E G + F SFY I + L LLN+ +A
Sbjct: 650 FPAAILTVFQILTGEDWNAVMYHGIESQG-GVSRGMFSSFYFIVLTLFGNYTLLNVFLAI 708
Query: 661 VLEAFFAEMELESSEKCEEE 680
++ EL E+ EE
Sbjct: 709 AVDNLANAQELTKDEEEMEE 728
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 120/273 (43%), Gaps = 39/273 (14%)
Query: 409 FSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLE 468
F K F+ S F Y I ++ +N V ++++ E L + + + VF ++ +E
Sbjct: 1465 FQYKTWTFVVSPPFEYFIMAMIALNTVVLMMKFYDAPYEYEL--MLKCLNIVFTSMFSME 1522
Query: 469 MALKIYSYGFENYWRDGQNRFDFLVTWVIVIGE-TITLASPNGQTFLSNGEWIRYLLLAR 527
LKI ++G NY+RD N FDF V V+G T L + F++ + +L L R
Sbjct: 1523 CVLKIIAFGVLNYFRDAWNVFDF----VTVLGSITDILVTEIANNFIN----LSFLRLFR 1574
Query: 528 MLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQ-CIYCSLGVQIFGGIVNAGNA 586
RLI+LL R + TF+ +L PY+ + + IY +G+Q+FG I
Sbjct: 1575 AARLIKLLRQGYTIRILLWTFVQSFKAL-PYVCLLIAMLFFIYAIIGMQVFGNIA----- 1628
Query: 587 KLEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWMQ--------------SYKEL 632
DDD + N++ + L L + W + S
Sbjct: 1629 -------LDDDTSINRHNNFRTFLQALMLLFRSATGEAWHEIMLSCLSSRACDEHSNASE 1681
Query: 633 TGTAWTLAYFVSFYLITVLLLLNLVIAFVLEAF 665
G+ + YFVSF + L+LNL +A +++ F
Sbjct: 1682 CGSDFAYFYFVSFIFLCSFLMLNLFVAVIMDNF 1714
Score = 56.6 bits (135), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 113/280 (40%), Gaps = 43/280 (15%)
Query: 422 FGYMISIILIVNLVAVIVETTL-DIQESSLQSVWQEVEFVFGWIYVLEMALKIYSYGF-- 478
F YMI +I N + + +E L D ++ + + E F I+ E +KI + GF
Sbjct: 97 FEYMILATIIANCIVLALEQHLPDGDKTPMSERLDDTEPYFIGIFCFEAGIKILALGFVL 156
Query: 479 --ENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARMLRLIRLLM 536
+Y R+G N DF+V ++ G F +R L R+LR ++L+
Sbjct: 157 HKGSYLRNGWNVMDFVVVLTGILATA-------GTDFD-----LRTLRAVRVLRPLKLVS 204
Query: 537 HVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAG------------ 584
+ + + + + + L+ +F ++ +G++ + G +
Sbjct: 205 GIPSLQVVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLEFYMGKFHKACFPNSTDPDPVG 264
Query: 585 --------NAKLEETDL------ADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWMQSYK 630
A+L E D A ++ + NF++ ++T+F + M W + +
Sbjct: 265 DFPCGKEAPARLCEGDTECREYWAGPNFGITNFDNILFAILTVFQCITMEGWTDILYNTN 324
Query: 631 ELTGTAWTLAYFVSFYLITVLLLLNLVIAFVLEAFFAEME 670
+ G W YF+ +I +LNLV+ + F E E
Sbjct: 325 DAAGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERE 364
>sp|P56698|CAC1B_DIPOM Probable voltage-dependent N-type calcium channel subunit alpha-1B
OS=Diplobatis ommata PE=2 SV=1
Length = 2326
Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 108/437 (24%), Positives = 180/437 (41%), Gaps = 68/437 (15%)
Query: 270 WYCLFFVLYVLIGVYFVTNLILAVVYDSFKSQLAKQVSEMDRMRRRTLGKAFNLIDNYNV 329
W L+F+ ++IG +F+ NL+L V+ F E +R+ R
Sbjct: 323 WNWLYFIPLIVIGSFFMLNLVLGVLSGEF-------AKERERVENRR------------- 362
Query: 330 GFLNKEQCIKLFEELNKYRTLPNISREEFELIFDELDDTHDFKINLDEFA---------D 380
FL + ++ +E N+Y +I+ E ++ E D + K LD D
Sbjct: 363 AFLKLRRQQQVEQEFNRYLRWIHIAEE---VMLAEEDKNAEDKCALDVLKRATTKKSKND 419
Query: 381 LCNAIALRFQKEDVPSCFENLPSIYH------SPFSEKLKAF-------IRSTKFGYMIS 427
L NA D+ S N PS+ S F K K F ++S F +++
Sbjct: 420 LINAEEGEDHFTDISSVGFNRPSLKSVKNERSSYFRRKEKRFRFFIRRMVKSQSFYWIV- 478
Query: 428 IILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLEMALKIYSYGFENYWRDGQN 487
+ +V L + V Q L EFVF +++ EM+LK+Y G NY+ N
Sbjct: 479 -LCLVGLNTLCVAIVHYDQPPLLTDALYFAEFVFLGLFLTEMSLKMYGLGPRNYFHSSFN 537
Query: 488 RFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFVAT 547
FDF V V I E + A +F I L R+LR+ ++ + R V +
Sbjct: 538 CFDFGVI-VGSIFEVVWTAVKPDTSF-----GISVLRALRLLRIFKVTKYWNSLRNLVVS 591
Query: 548 FLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAGNAKLEETDLADDDYLLFNFNDYP 607
L + S++ L +F ++ LG+Q+FGG N +D NF+ +P
Sbjct: 592 LLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFN-----------FEDGTPPTNFDTFP 640
Query: 608 NGMVTLFNLLVMGNWQVWM----QSYKELTGTAWTLAYFVSFYLITVLLLLNLVIAFVLE 663
++T+F +L +W M +++ + ++ YF+ L LLN+ +A ++
Sbjct: 641 AAILTVFQILTGEDWNEVMYYGIEAHGGVKKGMFSSVYFIILTLFGNYTLLNVFLAIAVD 700
Query: 664 AFFAEMELESSEKCEEE 680
EL E+ EE
Sbjct: 701 NLANAQELTKDEEEMEE 717
Score = 53.1 bits (126), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 115/279 (41%), Gaps = 42/279 (15%)
Query: 422 FGYMISIILIVNLVAVIVETTL-DIQESSLQSVWQEVEFVFGWIYVLEMALKIYSYGFE- 479
F YMI +I N + + +E L D ++ + + E F I+ E +KI + GF
Sbjct: 90 FEYMILATIIANCIVLALEQHLPDGDKTPMSERLDDTEPYFIGIFCFEAGIKIIALGFAF 149
Query: 480 ---NYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARMLRLIRLLM 536
+Y R+G N DF+V ++ G T+ G F +R L R+LR ++L+
Sbjct: 150 HKGSYLRNGWNVMDFVV---VLTGILTTI----GTDFD-----LRTLRAVRVLRPLKLVS 197
Query: 537 HVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAG------NAKLEE 590
+ + + + + + L+ +F ++ +G++ + G + N +EE
Sbjct: 198 GIPSLQVVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLEFYMGKFHKTCFSEETNEPVEE 257
Query: 591 --------TDLADDDYLLFNFNDYPN-----------GMVTLFNLLVMGNWQVWMQSYKE 631
+ L + + + + PN ++T+F + M W + + +
Sbjct: 258 FPCGTKYPSRLCPNGTVCKGYWNGPNFGITNFDNILFAVLTVFQCITMEGWTDMLYTAND 317
Query: 632 LTGTAWTLAYFVSFYLITVLLLLNLVIAFVLEAFFAEME 670
G W YF+ +I +LNLV+ + F E E
Sbjct: 318 ALGNTWNWLYFIPLIVIGSFFMLNLVLGVLSGEFAKERE 356
Score = 53.1 bits (126), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 126/276 (45%), Gaps = 43/276 (15%)
Query: 409 FSEKLKAFIRSTKFGYMISIILIVNLVAVIVE--TTLDIQESSLQSVWQEVEFVFGWIYV 466
F K+ F+ S F Y+I ++ +N + ++++ D + LQ + +F +++
Sbjct: 1457 FQYKMWKFVVSPPFEYLIMALIALNTIVLMMKFYNAPDPYDRMLQYL----NILFTFLFS 1512
Query: 467 LEMALKIYSYGFENYWRDGQNRFDFLVTWVIVIGE-TITLASPNGQTFLSNGEWIRYLLL 525
+E LK+ +G NY+RD N FDF V V+G T L + +F++ + +L L
Sbjct: 1513 MECVLKLIGFGVLNYFRDAWNVFDF----VTVLGSITDILVTELADSFIN----LSFLRL 1564
Query: 526 ARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQ-CIYCSLGVQIFGGIVNAG 584
R RLI+LL R + TF+ +L PY+ + + IY +G+Q+FG I
Sbjct: 1565 FRAARLIKLLRQGYTIRILLWTFVQSFKAL-PYVCLLIAMLFFIYAIIGMQVFGNI---- 1619
Query: 585 NAKLEETDLADDDYL--LFNFNDYPNGMVTLFNLLVMGNWQVWM-----QSY-------- 629
+L DD + NF + ++ L WQ M QS
Sbjct: 1620 -------ELDDDGAINRHNNFRTFLQAVMLLLRSATGEGWQEIMLACLNQSPCDARSGID 1672
Query: 630 KELTGTAWTLAYFVSFYLITVLLLLNLVIAFVLEAF 665
+ G+ + YFVSF + L+LNL +A +++ F
Sbjct: 1673 GDECGSNFAYFYFVSFIFFSSFLMLNLFVAVIMDNF 1708
Score = 33.1 bits (74), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 56/116 (48%), Gaps = 15/116 (12%)
Query: 266 KASRWYCLFFVLYVLIGVYFVTNLILAVVYDSFKS--QLAKQVSEMDR--MRRRTLGKAF 321
K + ++F++ L G Y + N+ LA+ D+ + +L K EM+ +++ T+ KA
Sbjct: 670 KKGMFSSVYFIILTLFGNYTLLNVFLAIAVDNLANAQELTKDEEEMEEANIQKNTIQKAM 729
Query: 322 NLID-----NYNVGFLNKEQCIKLFEELNKYRTLPNISREEF-----ELIFDELDD 367
+ D N+ K+Q K F+ ++ + + R + E +F+ELDD
Sbjct: 730 EVADVSPISATNLSIAAKDQ-QKSFKSMSIWEQRTSQLRRQHILTSQEALFNELDD 784
>sp|P27732|CAC1D_RAT Voltage-dependent L-type calcium channel subunit alpha-1D OS=Rattus
norvegicus GN=Cacna1d PE=1 SV=2
Length = 2203
Score = 77.8 bits (190), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 130/280 (46%), Gaps = 34/280 (12%)
Query: 404 IYHSPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGW 463
I +P+ K + S+ F YM+ +++++N + + ++ Q + VF
Sbjct: 1248 IPKNPYQYKFWYVVNSSPFEYMMFVLIMLNTLCLAMQHYE--QSKMFNDAMDILNMVFTG 1305
Query: 464 IYVLEMALKIYSYGFENYWRDGQNRFDFLVTWVIVIGETITLA-SPNGQTFLSNGEWIRY 522
++ +EM LK+ ++ + Y+ D N FD L IVIG I +A S + SN I +
Sbjct: 1306 VFTVEMVLKVIAFKPKGYFSDAWNTFDSL----IVIGSIIDVALSEADNSEESNRISITF 1361
Query: 523 LLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQC-IYCSLGVQIFGGIV 581
L R++RL++LL + R + TF+ +L PY+ + + IY +G+Q+FG +
Sbjct: 1362 FRLFRVMRLVKLLSRGEGIRTLLWTFIKSFQAL-PYVALLIAMLFFIYAVIGMQMFGKVA 1420
Query: 582 NAGNAKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWM--------------- 626
N ++ NF +P ++ LF WQ M
Sbjct: 1421 MRDNNQI---------NRNNNFQTFPQAVLLLFRCATGEAWQEIMLACLPGKLCDPDSDY 1471
Query: 627 QSYKELT-GTAWTLAYFVSFYLITVLLLLNLVIAFVLEAF 665
+E T G+ + + YF+SFY++ L++NL +A +++ F
Sbjct: 1472 NPGEEYTCGSNFAIVYFISFYMLCAFLIINLFVAVIMDNF 1511
Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 124/304 (40%), Gaps = 40/304 (13%)
Query: 406 HSPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQES-SLQSVWQEVEFVFGWI 464
++P + + F I + + N VA+ + +S S ++VE+ F I
Sbjct: 112 NNPIRRACISIVDWKPFDIFILLAIFANCVALAIYIPFPEDDSNSTNHNLEKVEYAFLII 171
Query: 465 YVLEMALKIYSYGF----ENYWRDGQNRFDFLVTWV---IVIGETITLASPNGQ--TFLS 515
+ +E LKI + G R+G N DF++ V VI E +T + G + S
Sbjct: 172 FTVETFLKIIASGLLLHPNASVRNGWNLLDFVIVIVGLFSVILEQLTKETEGGNHSSGKS 231
Query: 516 NGEWIRYLLLARMLRLIRLLMHVQQYRGFVATFL-TLIPSLMPYLGTIFCVQCIYCSLGV 574
G ++ L R+LR +RL+ V + + + + ++P L L +F + IY +G+
Sbjct: 232 GGFDVKALRAFRVLRPLRLVSGVPSLQVVLNSIIKAMVPLLHIALLVLFVI-IIYAIIGL 290
Query: 575 QIFGGIVN----------------------------AGNAKLEETDLADDDYLLFNFNDY 606
++F G ++ A N + + + NF+++
Sbjct: 291 ELFIGKMHKTCFFADSDIVAEEDPAPCAFSGNGRQCAANGTECRSGWVGPNGGITNFDNF 350
Query: 607 PNGMVTLFNLLVMGNWQVWMQSYKELTGTAWTLAYFVSFYLITVLLLLNLVIAFVLEAFF 666
M+T+F + M W + + G W YFVS ++ +LNLV+ + F
Sbjct: 351 AFAMLTVFQCITMEGWTDVLYWVNDAIGWEWPWVYFVSLIILGSFFVLNLVLGVLSGEFS 410
Query: 667 AEME 670
E E
Sbjct: 411 KERE 414
Score = 51.2 bits (121), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 116/270 (42%), Gaps = 31/270 (11%)
Query: 415 AFIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLEMALKIY 474
A ++S F +++ +++ +N + + E Q L + V ++ EM +K+Y
Sbjct: 577 AAVKSVTFYWLVIVLVFLNTLTISSEHY--NQPDWLTQIQDIANKVLLALFTCEMLVKMY 634
Query: 475 SYGFENYWRDGQNRFDFLVTWVIVIGETI----TLASPNGQTFLSNGEWIRYLLLARMLR 530
S G + Y+ NRFD V I ETI L SP G + R+LR
Sbjct: 635 SLGLQAYFVSLFNRFDCFVV-CGGITETILVELELMSPLG---------VSVFRCVRLLR 684
Query: 531 LIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAGNAKLEE 590
+ ++ H VA+ L + S+ L +F I+ LG+Q+FGG N + +
Sbjct: 685 IFKVTRHWTSLSNLVASLLNSMKSIASLLLLLFLFIIIFSLLGMQLFGGKFNFDETQTKR 744
Query: 591 TDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWM----QSYKELTGTAWTLA-YFVSF 645
+ F+++P ++T+F +L +W M +Y + + + YF+
Sbjct: 745 S----------TFDNFPQALLTVFQILTGEDWNAVMYDGIMAYGGPSSSGMIVCIYFIIL 794
Query: 646 YLITVLLLLNLVIAFVLEAFFAEMELESSE 675
++ +LL L +A ++ L +++
Sbjct: 795 FICGNYILLKLFLAIAVDNLADAESLNTAQ 824
>sp|Q61290|CAC1E_MOUSE Voltage-dependent R-type calcium channel subunit alpha-1E OS=Mus
musculus GN=Cacna1e PE=1 SV=1
Length = 2272
Score = 77.0 bits (188), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 98/425 (23%), Positives = 183/425 (43%), Gaps = 37/425 (8%)
Query: 267 ASRWYCLFFVLYVLIGVYFVTNLILAVVYDSFKSQLAKQVSEMDRMRRRTLGKAFNLIDN 326
+ W L+F+ ++IG +FV NL+L V+ F + + + M+ R + ++
Sbjct: 324 GATWNWLYFIPLIIIGSFFVLNLVLGVLSGEFAKERERVENRRAFMKLRRQQQIERELNG 383
Query: 327 YNVGFLNKEQCIKLFEELNKYRT-------LPNISREEFELIFDELDDTHDFKINLDEFA 379
Y +++K + + L EE T I R E + + D H +++
Sbjct: 384 YRA-WIDKAEEVMLAEENKNSGTSALEVLRRATIKRSRTEAMTRDSSDEH--CVDISSVG 440
Query: 380 DLCNAIALRFQKEDVPSCFENLPSIYHSPFSEKLKAFIRSTKFGYMISIILIVNLVAVIV 439
+++ K D S F + + ++ ++S F +++ ++ +N V +
Sbjct: 441 TPLARASIKSTKVDGASYFRHKERLLRI----SIRHMVKSQVFYWIVLSVVALNTACVAI 496
Query: 440 ETTLDIQESSLQSVWQEVEFVFGWIYVLEMALKIYSYGFENYWRDGQNRFDFLVTWVIVI 499
Q L + EF+F +++LEM+LK+Y G Y+ N FDF VT V I
Sbjct: 497 --VHHNQPQWLTHLLYYAEFLFLGLFLLEMSLKMYGMGPRLYFHSSFNCFDFGVT-VGSI 553
Query: 500 GETITLASPNGQTFLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYL 559
E + G +F I L R+LR+ ++ + R V + ++ + S++ L
Sbjct: 554 FEVVWAIFRPGTSF-----GISVLRALRLLRIFKITKYWASLRNLVVSLMSSMKSIISLL 608
Query: 560 GTIFCVQCIYCSLGVQIFGGIVNAGNAKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVM 619
+F ++ LG+Q+FGG N +D NF+ +P ++T+F +L
Sbjct: 609 FLLFLFIVVFALLGMQLFGGRFN-----------FNDGTPSANFDTFPAAIMTVFQILTG 657
Query: 620 GNWQVWM----QSYKELTGTAWTLAYFVSFYLITVLLLLNLVIAFVLEAFFAEMELESSE 675
+W M +S ++ W+ YF+ L LLN+ +A ++ EL E
Sbjct: 658 EDWNEVMYNGIRSQGGVSSGMWSAIYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDE 717
Query: 676 KCEEE 680
+ EEE
Sbjct: 718 QEEEE 722
Score = 73.9 bits (180), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 128/286 (44%), Gaps = 40/286 (13%)
Query: 401 LPSIYHSPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVE--TTLDIQESSLQSVWQEVE 458
+P H+ F ++ F+ S F Y I ++ +N V ++++ T E +L+ +
Sbjct: 1463 MPQNRHT-FQYRVWHFVVSPSFEYTIMAMIALNTVVLMMKYYTAPCTYELALKYL----N 1517
Query: 459 FVFGWIYVLEMALKIYSYGFENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGE 518
F ++ LE LK+ ++GF NY+RD N FDF + VIG + + + ++G
Sbjct: 1518 IAFTMVFSLECVLKVIAFGFLNYFRDTWNIFDF----ITVIGSITEIILTDSKLVNTSGF 1573
Query: 519 WIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQ-CIYCSLGVQIF 577
+ +L L R RLI+LL R + TF+ +L PY+ + + IY +G+Q+F
Sbjct: 1574 NMSFLKLFRAARLIKLLRQGYTIRILLWTFVQSFKAL-PYVCLLIAMLFFIYAIIGMQVF 1632
Query: 578 GGIVNAGNAKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWM----------- 626
GN KL+E + NF + ++ LF WQ M
Sbjct: 1633 ------GNIKLDEESHINRHN---NFRSFFGSLMLLFRSATGEAWQEIMLSCLGEKGCEP 1683
Query: 627 -------QSYKELTGTAWTLAYFVSFYLITVLLLLNLVIAFVLEAF 665
Q+ E GT YFVSF L+LNL +A +++ F
Sbjct: 1684 DTTAPSGQNESERCGTDLAYVYFVSFIFFCSFLMLNLFVAVIMDNF 1729
Score = 54.7 bits (130), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/285 (21%), Positives = 117/285 (41%), Gaps = 36/285 (12%)
Query: 414 KAFIRSTKFGYMISIILIVNLVAVIVETTL-DIQESSLQSVWQEVEFVFGWIYVLEMALK 472
K I F YMI +I N + + +E L + ++ + ++ E F I+ E +K
Sbjct: 84 KKLIDWPPFEYMILATIIANCIVLALEQHLPEDDKTPMSRRLEKTEPYFIGIFCFEAGIK 143
Query: 473 IYSYGF----ENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARM 528
I + GF +Y R+G N DF+V V+ + A + T + +R L R+
Sbjct: 144 IVALGFIFHKGSYLRNGWNVMDFIV----VLSGILATAGTHFNTHVD----LRALRAVRV 195
Query: 529 LRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGG-------IV 581
LR ++L+ + + + + + + L+ +F ++ +G++ + G +
Sbjct: 196 LRPLKLVSGIPSLQIVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLEFYSGKLHRACFMN 255
Query: 582 NAG----------------NAKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVW 625
N+G A E D + + F++ ++T+F + M W
Sbjct: 256 NSGILEGFDPPHPCGVQGCPAGYECKDWIGPNDGITQFDNILFAVLTVFQCITMEGWTTV 315
Query: 626 MQSYKELTGTAWTLAYFVSFYLITVLLLLNLVIAFVLEAFFAEME 670
+ + + G W YF+ +I +LNLV+ + F E E
Sbjct: 316 LYNTNDALGATWNWLYFIPLIIIGSFFVLNLVLGVLSGEFAKERE 360
>sp|Q07652|CAC1E_RAT Voltage-dependent R-type calcium channel subunit alpha-1E OS=Rattus
norvegicus GN=Cacna1e PE=1 SV=1
Length = 2222
Score = 76.6 bits (187), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 98/425 (23%), Positives = 183/425 (43%), Gaps = 37/425 (8%)
Query: 267 ASRWYCLFFVLYVLIGVYFVTNLILAVVYDSFKSQLAKQVSEMDRMRRRTLGKAFNLIDN 326
+ W L+F+ ++IG +FV NL+L V+ F + + + M+ R + ++
Sbjct: 274 GATWNWLYFIPLIIIGSFFVLNLVLGVLSGEFAKERERVENRRAFMKLRRQQQIERELNG 333
Query: 327 YNVGFLNKEQCIKLFEELNKYRT-------LPNISREEFELIFDELDDTHDFKINLDEFA 379
Y +++K + + L EE T I R E + + D H +++
Sbjct: 334 YRA-WIDKAEEVMLAEENKNSGTSALEVLRRATIKRSRTEAMTRDSSDEH--CVDISSVG 390
Query: 380 DLCNAIALRFQKEDVPSCFENLPSIYHSPFSEKLKAFIRSTKFGYMISIILIVNLVAVIV 439
+++ K D S F + + ++ ++S F +++ ++ +N V +
Sbjct: 391 TPLARASIKSTKVDGASYFRHKERLLRI----SIRHMVKSQVFYWIVLSVVALNTACVAI 446
Query: 440 ETTLDIQESSLQSVWQEVEFVFGWIYVLEMALKIYSYGFENYWRDGQNRFDFLVTWVIVI 499
Q L + EF+F +++LEM+LK+Y G Y+ N FDF VT V I
Sbjct: 447 --VHHNQPQWLTHLLYYAEFLFLGLFLLEMSLKMYGMGPRLYFHSSFNCFDFGVT-VGSI 503
Query: 500 GETITLASPNGQTFLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYL 559
E + G +F I L R+LR+ ++ + R V + ++ + S++ L
Sbjct: 504 FEVVWAIFRPGTSF-----GISVLRALRLLRIFKITKYWASLRNLVVSLMSSMKSIISLL 558
Query: 560 GTIFCVQCIYCSLGVQIFGGIVNAGNAKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVM 619
+F ++ LG+Q+FGG N +D NF+ +P ++T+F +L
Sbjct: 559 FLLFLFIVVFALLGMQLFGGRFN-----------FNDGTPSANFDTFPAAIMTVFQILTG 607
Query: 620 GNWQVWM----QSYKELTGTAWTLAYFVSFYLITVLLLLNLVIAFVLEAFFAEMELESSE 675
+W M +S ++ W+ YF+ L LLN+ +A ++ EL E
Sbjct: 608 EDWNEVMYNGIRSQGGVSSGMWSAIYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDE 667
Query: 676 KCEEE 680
+ EEE
Sbjct: 668 QEEEE 672
Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 125/284 (44%), Gaps = 36/284 (12%)
Query: 401 LPSIYHSPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFV 460
+P H+ F ++ F+ S F Y I ++ +N V ++++ L + + F
Sbjct: 1412 MPQNRHT-FQYRVWHFVVSPSFEYTIMAMIALNTVVLMMKYYSAPWTYELALKYLNIAFT 1470
Query: 461 FGWIYVLEMALKIYSYGFENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWI 520
++ LE LK+ ++GF NY+RD N FDF + VIG + + + ++G +
Sbjct: 1471 M--VFSLECVLKVIAFGFLNYFRDTWNIFDF----ITVIGSITEIILTDSKLVNTSGFNM 1524
Query: 521 RYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQ-CIYCSLGVQIFGG 579
+L L R RLI+LL R + TF+ +L PY+ + + IY +G+Q+F
Sbjct: 1525 SFLKLFRAARLIKLLRQGYTIRILLWTFVQSFKAL-PYVCLLIAMLFFIYAIIGMQVF-- 1581
Query: 580 IVNAGNAKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWM------------- 626
GN KL+E + NF + ++ LF WQ M
Sbjct: 1582 ----GNIKLDEESHINRHN---NFRSFFGSLMLLFRSATGEAWQEIMLSCLGEKGCEPDT 1634
Query: 627 -----QSYKELTGTAWTLAYFVSFYLITVLLLLNLVIAFVLEAF 665
Q+ E GT YFVSF L+LNL +A +++ F
Sbjct: 1635 TAPSGQNESERCGTDLAYVYFVSFIFFCSFLMLNLFVAVIMDNF 1678
Score = 54.7 bits (130), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/285 (21%), Positives = 117/285 (41%), Gaps = 36/285 (12%)
Query: 414 KAFIRSTKFGYMISIILIVNLVAVIVETTL-DIQESSLQSVWQEVEFVFGWIYVLEMALK 472
K I F YMI +I N + + +E L + ++ + ++ E F I+ E +K
Sbjct: 34 KKLIDWPPFEYMILATIIANCIVLALEQHLPEDDKTPMSRRLEKTEPYFIGIFCFEAGIK 93
Query: 473 IYSYGF----ENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARM 528
I + GF +Y R+G N DF+V V+ + A + T + +R L R+
Sbjct: 94 IVALGFIFHKGSYLRNGWNVMDFIV----VLSGILATAGTHFNTHVD----LRTLRAVRV 145
Query: 529 LRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGG-------IV 581
LR ++L+ + + + + + + L+ +F ++ +G++ + G +
Sbjct: 146 LRPLKLVSGIPSLQIVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLEFYSGKLHRACFMN 205
Query: 582 NAG----------------NAKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVW 625
N+G A E D + + F++ ++T+F + M W
Sbjct: 206 NSGILEGFDPPHPCGVQGCPAGYECKDWIGPNDGITQFDNILFAVLTVFQCITMEGWTTV 265
Query: 626 MQSYKELTGTAWTLAYFVSFYLITVLLLLNLVIAFVLEAFFAEME 670
+ + + G W YF+ +I +LNLV+ + F E E
Sbjct: 266 LYNTNDALGATWNWLYFIPLIIIGSFFVLNLVLGVLSGEFAKERE 310
>sp|Q13698|CAC1S_HUMAN Voltage-dependent L-type calcium channel subunit alpha-1S OS=Homo
sapiens GN=CACNA1S PE=1 SV=4
Length = 1873
Score = 76.6 bits (187), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 104/458 (22%), Positives = 192/458 (41%), Gaps = 78/458 (17%)
Query: 261 WIPAYKASRWYCLFFVLYVLIGVYFVTNLILAVVYDSFKSQLAKQVSEMDRMRRRTLGKA 320
W+ + W ++FV +L+G +F+ NL+L V+ F + K S R T K
Sbjct: 300 WVNDAIGNEWPWIYFVTLILLGSFFILNLVLGVLSGEFTKEREKAKS------RGTFQK- 352
Query: 321 FNLIDNYNVGFLNKEQCIKLFEELNKYRTLPNISREEFELIFDELDDTHDFKINLDEFAD 380
L ++Q +L E+L Y + I++ E + D ++D + K++LDE
Sbjct: 353 -----------LREKQ--QLDEDLRGYMSW--ITQGE---VMD-VEDFREGKLSLDEGGS 393
Query: 381 LCNAIALRFQKEDVPSCFE--NLPSI---------YHSPFSEKLKAFIRSTKFGYMISII 429
D S +E L I ++ F K ++S F +++ +I
Sbjct: 394 ------------DTESLYEIAGLNKIIQFIRHWRQWNRIFRWKCHDIVKSKVFYWLVILI 441
Query: 430 LIVNLVAVIVET-TLDIQESSLQSVWQEVEFVFGWIYVLEMALKIYSYGFENYWRDGQNR 488
+ +N +++ E + + LQ + V ++ EM +K+Y G Y+ NR
Sbjct: 442 VALNTLSIASEHHNQPLWLTRLQDIANRVLLS---LFTTEMLMKMYGLGLRQYFMSIFNR 498
Query: 489 FDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFVATF 548
FD V ++ I L T L I L R+LR+ ++ + VA+
Sbjct: 499 FDCFVVCSGIL--EILLVESGAMTPLG----ISVLRCIRLLRIFKITKYWTSLSNLVASL 552
Query: 549 LTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAGNAKLEETDLADDDYLLFNFNDYPN 608
L I S+ L +F I+ LG+Q+FGG D D + NF+++P
Sbjct: 553 LNSIRSIASLLLLLFLFIVIFALLGMQLFGG----------RYDFEDTEVRRSNFDNFPQ 602
Query: 609 GMVTLFNLLVMGNWQVWM-QSYKELTGTAW----TLAYFVSFYLITVLLLLNLVIAFVLE 663
++++F +L +W M G ++ YF+ ++ +LLN+ +A ++
Sbjct: 603 ALISVFQVLTGEDWTSMMYNGIMAYGGPSYPGMLVCIYFIILFVCGNYILLNVFLAIAVD 662
Query: 664 AFFAEMELESSEKCEEEDKDGEPRERRRRVGTKTRSQK 701
L S++K + E+K + R+ G +S++
Sbjct: 663 NLAEAESLTSAQKAKAEEK----KRRKMSKGLPDKSEE 696
Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 147/343 (42%), Gaps = 61/343 (17%)
Query: 360 LIFDELDDTHDFKINLDEFADLCNAIALRFQKEDVPSCFENLPSIYHSPFSEKLKAFIRS 419
+ F E +T LD+ C AL+ + C+ I +P+ ++ + S
Sbjct: 1066 VTFQEQGETEYKNCELDKNQRQCVQYALKARPL---RCY-----IPKNPYQYQVWYIVTS 1117
Query: 420 TKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLEMALKIYSYGFE 479
+ F Y++ ++++N + + ++ Q + + + F I+ LEM LK+ ++
Sbjct: 1118 SYFEYLMFALIMLNTICLGMQHY--NQSEQMNHISDILNVAFTIIFTLEMILKLMAFKAR 1175
Query: 480 NYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNG----------------EWIR-- 521
Y+ D N FDFL IVIG I + TFL++ E R
Sbjct: 1176 GYFGDPWNVFDFL----IVIGSIIDVILSEIDTFLASSGGLYCLGGGCGNVDPDESARIS 1231
Query: 522 --YLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQC-IYCSLGVQIFG 578
+ L R++RLI+LL + R + TF+ +L PY+ + + IY +G+Q+FG
Sbjct: 1232 SAFFRLFRVMRLIKLLSRAEGVRTLLWTFIKSFQAL-PYVALLIVMLFFIYAVIGMQMFG 1290
Query: 579 GIVNAGNAKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQ--VWMQSYKELT--- 633
I ++ + NF +P ++ LF WQ + SY +L
Sbjct: 1291 KIALVDGTQINRNN---------NFQTFPQAVLLLFRCATGEAWQEILLACSYGKLCDPE 1341
Query: 634 -----------GTAWTLAYFVSFYLITVLLLLNLVIAFVLEAF 665
GT + YF+SFY++ L++NL +A +++ F
Sbjct: 1342 SDYAPGEEYTCGTNFAYYYFISFYMLCAFLVINLFVAVIMDNF 1384
Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/331 (21%), Positives = 137/331 (41%), Gaps = 48/331 (14%)
Query: 391 KEDVPSCFENLPS-----IYHSPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTL-D 444
K+ VP P +P + + + F +I + + N VA+ V + +
Sbjct: 17 KKPVPEILPRPPRALFCLTLENPLRKACISIVEWKPFETIILLTIFANCVALAVYLPMPE 76
Query: 445 IQESSLQSVWQEVEFVFGWIYVLEMALKIYSYGF----ENYWRDGQNRFDFLVTWV---I 497
+SL +++E+ F ++ +E A+KI +YGF + Y R G N DF + ++
Sbjct: 77 DDNNSLNLGLEKLEYFFLIVFSIEAAMKIIAYGFLFHQDAYLRSGWNVLDFTIVFLGVFT 136
Query: 498 VIGETITLASPNGQTFLSNGEW--IRYLLLARMLRLIRLLMHVQQYRGFV-ATFLTLIPS 554
VI E + + + S G ++ L R+LR +RL+ V + + + F ++P
Sbjct: 137 VILEQVNVIQSHTAPMSSKGAGLDVKALRAFRVLRPLRLVSGVPSLQVVLNSIFKAMLPL 196
Query: 555 LMPYLGTIFCVQCIYCSLGVQIFGGIVNAGN--------AKLEETDLAD----------- 595
L +F V IY +G+++F G ++ A +E + +
Sbjct: 197 FHIALLVLFMV-IIYAIIGLELFKGKMHKTCYFIGTDIVATVENEEPSPCARTGSGRRCT 255
Query: 596 ------------DDYLLFNFNDYPNGMVTLFNLLVMGNWQVWMQSYKELTGTAWTLAYFV 643
++ + +F+++ M+T++ + M W + + G W YFV
Sbjct: 256 INGSECRGGWPGPNHGITHFDNFGFSMLTVYQCITMEGWTDVLYWVNDAIGNEWPWIYFV 315
Query: 644 SFYLITVLLLLNLVIAFVLEAFFAEMELESS 674
+ L+ +LNLV+ + F E E S
Sbjct: 316 TLILLGSFFILNLVLGVLSGEFTKEREKAKS 346
Score = 49.7 bits (117), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 69/332 (20%), Positives = 146/332 (43%), Gaps = 41/332 (12%)
Query: 272 CLFFVLYVLIGVYFVTNLILAVVYDSF---KSQLAKQVSEMDRMRRRTLGKAFNLIDNYN 328
C++F++ + G Y + N+ LA+ D+ +S + Q ++ + +RR + K L D
Sbjct: 638 CIYFIILFVCGNYILLNVFLAIAVDNLAEAESLTSAQKAKAEEKKRRKMSKG--LPDKSE 695
Query: 329 VGFLNKEQCIKLFEELNKYRTLPNISR---EEFELIFDELDDTH---DFKINLDE----- 377
K K E+ K +P ++ +EFE +E+ D + DF + +E
Sbjct: 696 E---EKSTMAKKLEQKPKGEGIPTTAKLKIDEFESNVNEVKDPYPSADFPGDDEEDEPEI 752
Query: 378 -FADLCNAIA-LRFQKEDVPSCFENLPSIYHSPFSEKLKAF----IRSTKFGYMISIILI 431
+ +A L+ +++ VP S + + K++ + +T F I + ++
Sbjct: 753 PLSPRPRPLAELQLKEKAVP--IPEASSFFIFSPTNKIRVLCHRIVNATWFTNFILLFIL 810
Query: 432 VNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLEMALKIYSYGF----ENYWRDGQN 487
++ A+ E + +S + + + F ++ +E+ LK+ +YG ++ R+ N
Sbjct: 811 LSSAALAAEDPIR-ADSMRNQILKHFDIGFTSVFTVEIVLKMTTYGAFLHKGSFCRNYFN 869
Query: 488 RFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFVAT 547
D LV V +I ++ L S S ++ L + R+LR +R + + + V
Sbjct: 870 MLDLLVVAVSLI--SMGLES-------SAISVVKILRVLRVLRPLRAINRAKGLKHVVQC 920
Query: 548 FLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGG 579
I ++ + +Q ++ +GVQ+F G
Sbjct: 921 MFVAISTIGNIVLVTTLLQFMFACIGVQLFKG 952
>sp|Q9P0X4|CAC1I_HUMAN Voltage-dependent T-type calcium channel subunit alpha-1I OS=Homo
sapiens GN=CACNA1I PE=1 SV=1
Length = 2223
Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 124/268 (46%), Gaps = 25/268 (9%)
Query: 426 ISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLEMALKIYSYGFENYWRDG 485
I+ I+ +N+V + +E Q +SL++ + ++F ++VLE LK+ ++G +++D
Sbjct: 1493 ITFIICLNVVTMSLEHY--NQPTSLETALKYCNYMFTTVFVLEAVLKLVAFGLRRFFKDR 1550
Query: 486 QNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFV 545
N+ D + + V+G T+ N + N IR + + R+ R+++LL R +
Sbjct: 1551 WNQLDLAIVLLSVMGITLEEIEINAALPI-NPTIIRIMRVLRIARVLKLLKMATGMRALL 1609
Query: 546 ATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAGNAKLEETDLADDDYLLFNFND 605
T + +P + + IY +LGV++FG +V E F +
Sbjct: 1610 DTVVQALPQVGNLGLLFMLLFFIYAALGVELFGKLVCNDENPCEGMSRH------ATFEN 1663
Query: 606 YPNGMVTLFNLLVMGNWQVWMQ-SYKELTGTAWTL---------AYFVSFYLITVLLLLN 655
+ +TLF + NW M+ + ++ T + YFVSF L +L+N
Sbjct: 1664 FGMAFLTLFQVSTGDNWNGIMKDTLRDCTHDERSCLSSLQFVSPLYFVSFVLTAQFVLIN 1723
Query: 656 LVIAFVLEAFFAEMELESSEKCEEEDKD 683
+V+A +++ L+ S K +ED +
Sbjct: 1724 VVVAVLMK------HLDDSNKEAQEDAE 1745
Score = 63.9 bits (154), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 134/293 (45%), Gaps = 39/293 (13%)
Query: 412 KLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLEMAL 471
KL+ + S F I + ++VN V++ +E +E L ++ + VF ++ LEM L
Sbjct: 632 KLRGIVDSKYFNRGIMMAILVNTVSMGIEHHEQPEE--LTNILEICNVVFTSMFALEMIL 689
Query: 472 KIYSYGFENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLAR-MLR 530
K+ ++G +Y R+ N FD ++ + + I + G + L +R L L R M
Sbjct: 690 KLAAFGLFDYLRNPYNIFDSIIVIISIW--EIVGQADGGLSVLRTFRLLRVLKLVRFMPA 747
Query: 531 LIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAGNAKLEE 590
L R L+ + + VATF L LM + IF I+ LG+ IFG +
Sbjct: 748 LRRQLVVLMKTMDNVATFCML---LMLF---IF----IFSILGMHIFGCKFSL------R 791
Query: 591 TDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWMQSYKELTGTA-WTLAYFVSFYLIT 649
TD D NF+ +VT+F +L +W V + Y + T+ W YFV+
Sbjct: 792 TDTGDTVPDRKNFDSLLWAIVTVFQILTQEDWNVVL--YNGMASTSPWASLYFVALMTFG 849
Query: 650 VLLLLNLVIAFVLEAFFAEM--------ELESSEKCEEEDK-------DGEPR 687
+L NL++A ++E F AE E +SS EE DK G+P+
Sbjct: 850 NYVLFNLLVAILVEGFQAEGDANRSYSDEDQSSSNIEEFDKLQEGLDSSGDPK 902
Score = 60.8 bits (146), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 122/279 (43%), Gaps = 35/279 (12%)
Query: 414 KAFIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVE-FVFGWIYVLEMALK 472
+ I F Y++ + +N + + +E I+ S + ++ V ++F I+V EM LK
Sbjct: 1164 QTIIAHKLFDYVVLAFIFLNCITIALERP-QIEAGSTERIFLTVSNYIFTAIFVGEMTLK 1222
Query: 473 IYS----YGFENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARM 528
+ S +G + Y R N D + +V +I ++LAS G L L + R+
Sbjct: 1223 VVSLGLYFGEQAYLRSSWNVLDGFLVFVSIIDIVVSLASAGGAKILG------VLRVLRL 1276
Query: 529 LRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQC----IYCSLGVQIFGGI---- 580
LR +R L + + G TLI SL P +G I + C I+ LGVQ+F G
Sbjct: 1277 LRTLRPLRVISRAPGLKLVVETLISSLKP-IGNIVLICCAFFIIFGILGVQLFKGKFYHC 1335
Query: 581 --VNAGNAKLEETDLADD---DYLLFNFNDYPNGMVTLFNLLVMGNW---------QVWM 626
V+ N +A + + +NF++ +++LF L W V +
Sbjct: 1336 LGVDTRNITNRSDCMAANYRWVHHKYNFDNLGQALMSLFVLASKDGWVNIMYNGLDAVAV 1395
Query: 627 QSYKELTGTAWTLAYFVSFYLITVLLLLNLVIAFVLEAF 665
W L YF+SF LI +LN+ + V+E F
Sbjct: 1396 DQQPVTNHNPWMLLYFISFLLIVSFFVLNMFVGVVVENF 1434
>sp|Q02343|CAC1E_RABIT Voltage-dependent R-type calcium channel subunit alpha-1E
OS=Oryctolagus cuniculus GN=CACNA1E PE=2 SV=1
Length = 2259
Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 98/425 (23%), Positives = 183/425 (43%), Gaps = 37/425 (8%)
Query: 267 ASRWYCLFFVLYVLIGVYFVTNLILAVVYDSFKSQLAKQVSEMDRMRRRTLGKAFNLIDN 326
+ W L+F+ ++IG +FV NL+L V+ F + + + M+ R + ++
Sbjct: 323 GATWNWLYFIPLIIIGSFFVLNLVLGVLSGEFAKERERVENRRAFMKLRRQQQIERELNG 382
Query: 327 YNVGFLNKEQCIKLFEELNKYRT-------LPNISREEFELIFDELDDTHDFKINLDEFA 379
Y +++K + + L EE T I R E + + D H +++
Sbjct: 383 YRA-WIDKAEEVMLAEENKNSGTSALEVLRRATIKRSRTEAMTRDSSDEH--CVDISSVG 439
Query: 380 DLCNAIALRFQKEDVPSCFENLPSIYHSPFSEKLKAFIRSTKFGYMISIILIVNLVAVIV 439
+++ K D S F + + ++ ++S F +++ ++ +N V +
Sbjct: 440 TPLARASIKSAKVDGASYFRHKERLLRI----SVRHAVKSQVFYWIVLSLVALNTACVAI 495
Query: 440 ETTLDIQESSLQSVWQEVEFVFGWIYVLEMALKIYSYGFENYWRDGQNRFDFLVTWVIVI 499
Q L + EF+F +++LEM+LK+Y G Y+ N FDF VT V I
Sbjct: 496 --VHHNQPQWLTHLLYYAEFLFLGLFLLEMSLKMYGMGPRLYFHSSFNCFDFGVT-VGSI 552
Query: 500 GETITLASPNGQTFLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYL 559
E + G +F I L R+LR+ ++ + R V + ++ + S++ L
Sbjct: 553 FEVVWAIFRPGTSF-----GISVLRALRLLRIFKITKYWASLRNLVVSLMSSMKSIISLL 607
Query: 560 GTIFCVQCIYCSLGVQIFGGIVNAGNAKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVM 619
+F ++ LG+Q+FGG N +D NF+ +P ++T+F +L
Sbjct: 608 FLLFLFIVVFALLGMQLFGGRFN-----------FNDGTPSANFDTFPAAIMTVFQILTG 656
Query: 620 GNWQVWM----QSYKELTGTAWTLAYFVSFYLITVLLLLNLVIAFVLEAFFAEMELESSE 675
+W M +S ++ W+ YF+ L LLN+ +A ++ EL E
Sbjct: 657 EDWNEVMYNGIRSQGGVSSGMWSAVYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDE 716
Query: 676 KCEEE 680
+ EEE
Sbjct: 717 QEEEE 721
Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 124/284 (43%), Gaps = 36/284 (12%)
Query: 401 LPSIYHSPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFV 460
+P H+ F ++ F+ S F Y I ++ +N V ++++ + + + +
Sbjct: 1450 MPQNRHT-FQYRVWHFVVSPSFEYTIMAMIALNTVVLMMKYY--SAPCTYELALKYLNIA 1506
Query: 461 FGWIYVLEMALKIYSYGFENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWI 520
F ++ LE LK+ ++GF NY+RD N FDF + VIG + + + + G +
Sbjct: 1507 FTMVFSLECVLKVIAFGFVNYFRDTWNIFDF----ITVIGSITEIVLTDSKLVNTTGFNM 1562
Query: 521 RYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQ-CIYCSLGVQIFGG 579
+L L R RLI+LL R + TF+ +L PY+ + + IY +G+Q+F
Sbjct: 1563 SFLKLFRAARLIKLLRQGYTIRILLWTFVQSFKAL-PYVCLLIAMLFFIYAIIGMQVF-- 1619
Query: 580 IVNAGNAKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWM------------- 626
GN +L+E + NF + ++ LF WQ M
Sbjct: 1620 ----GNIRLDEESHINRHN---NFRSFFGSLMLLFRSATGEAWQEIMLSCLGEKGCEPDT 1672
Query: 627 -----QSYKELTGTAWTLAYFVSFYLITVLLLLNLVIAFVLEAF 665
Q E GT YFVSF L+LNL +A +++ F
Sbjct: 1673 TAPSGQQESERCGTDLAYVYFVSFIFFCSFLMLNLFVAVIMDNF 1716
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/285 (21%), Positives = 117/285 (41%), Gaps = 36/285 (12%)
Query: 414 KAFIRSTKFGYMISIILIVNLVAVIVETTL-DIQESSLQSVWQEVEFVFGWIYVLEMALK 472
K I F YMI +I N + + +E L + ++ + ++ E F I+ E +K
Sbjct: 83 KKLIDWPPFEYMILATIIANCIVLALEQHLPEDDKTPMSRRLEKTEPYFIGIFCFEAGIK 142
Query: 473 IYSYGF----ENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARM 528
I + GF +Y R+G N DF+V V+ + A + T + +R L R+
Sbjct: 143 IVALGFIFHKGSYLRNGWNVMDFIV----VLSGILATAGTHFNTHVD----LRTLRAVRV 194
Query: 529 LRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGG-------IV 581
LR ++L+ + + + + + + L+ +F ++ +G++ + G +
Sbjct: 195 LRPLKLVSGIPSLQIVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLEFYSGKLHRACFVN 254
Query: 582 NAG----------------NAKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVW 625
N+G A E D + + F++ ++T+F + M W
Sbjct: 255 NSGVLEGFDPPHPCGVQGCPAGYECKDWIGPNDGITQFDNILFAVLTVFQCITMEGWTTV 314
Query: 626 MQSYKELTGTAWTLAYFVSFYLITVLLLLNLVIAFVLEAFFAEME 670
+ + + G W YF+ +I +LNLV+ + F E E
Sbjct: 315 LYNTNDALGATWNWLYFIPLIIIGSFFVLNLVLGVLSGEFAKERE 359
>sp|Q01668|CAC1D_HUMAN Voltage-dependent L-type calcium channel subunit alpha-1D OS=Homo
sapiens GN=CACNA1D PE=1 SV=2
Length = 2161
Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 130/291 (44%), Gaps = 41/291 (14%)
Query: 404 IYHSPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGW 463
I +P+ K + S+ F YM+ +++++N + + ++ Q + VF
Sbjct: 1189 IPKNPYQYKFWYVVNSSPFEYMMFVLIMLNTLCLAMQHYE--QSKMFNDAMDILNMVFTG 1246
Query: 464 IYVLEMALKIYSYGFENYWRDGQNRFDFLVTWVIVIGETITLASPN------------GQ 511
++ +EM LK+ ++ + Y+ D N FD L+ +I ++ A P G
Sbjct: 1247 VFTVEMVLKVIAFKPKGYFSDAWNTFDSLIVIGSIIDVALSEADPTESENVPVPTATPGN 1306
Query: 512 TFLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQC-IYC 570
+ SN I + L R++RL++LL + R + TF+ +L PY+ + + IY
Sbjct: 1307 SEESNRISITFFRLFRVMRLVKLLSRGEGIRTLLWTFIKSFQAL-PYVALLIAMLFFIYA 1365
Query: 571 SLGVQIFGGIVNAGNAKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWM---- 626
+G+Q+FG + N ++ NF +P ++ LF WQ M
Sbjct: 1366 VIGMQMFGKVAMRDNNQI---------NRNNNFQTFPQAVLLLFRCATGEAWQEIMLACL 1416
Query: 627 -----------QSYKELT-GTAWTLAYFVSFYLITVLLLLNLVIAFVLEAF 665
+E T G+ + + YF+SFY++ L++NL +A +++ F
Sbjct: 1417 PGKLCDPESDYNPGEEYTCGSNFAIVYFISFYMLCAFLIINLFVAVIMDNF 1467
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 127/304 (41%), Gaps = 40/304 (13%)
Query: 406 HSPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQES-SLQSVWQEVEFVFGWI 464
++P + + F I + + N VA+ + +S S ++VE+ F I
Sbjct: 112 NNPIRRACISIVEWKPFDIFILLAIFANCVALAIYIPFPEDDSNSTNHNLEKVEYAFLII 171
Query: 465 YVLEMALKIYSYGF----ENYWRDGQNRFDFLVTWV---IVIGETITLASPNGQ--TFLS 515
+ +E LKI +YG Y R+G N DF++ V VI E +T + G + S
Sbjct: 172 FTVETFLKIIAYGLLLHPNAYVRNGWNLLDFVIVIVGLFSVILEQLTKETEGGNHSSGKS 231
Query: 516 NGEWIRYLLLARMLRLIRLLMHVQQYRGFVATFL-TLIPSLMPYLGTIFCVQCIYCSLGV 574
G ++ L R+LR +RL+ V + + + + ++P L L +F + IY +G+
Sbjct: 232 GGFDVKALRAFRVLRPLRLVSGVPSLQVVLNSIIKAMVPLLHIALLVLFVI-IIYAIIGL 290
Query: 575 QIFGGIVN-----AGNAKLEETDLAD-----------------------DDYLLFNFNDY 606
++F G ++ A + + E D A + + NF+++
Sbjct: 291 ELFIGKMHKTCFFADSDIVAEEDPAPCAFSGNGRQCTANGTECRSGWVGPNGGITNFDNF 350
Query: 607 PNGMVTLFNLLVMGNWQVWMQSYKELTGTAWTLAYFVSFYLITVLLLLNLVIAFVLEAFF 666
M+T+F + M W + + G YFVS + +LNLV+ + F
Sbjct: 351 AFAMLTVFQCITMEGWTDVLYWMNDAMGFELPWVYFVSLVIFGSFFVLNLVLGVLSGEFS 410
Query: 667 AEME 670
E E
Sbjct: 411 KERE 414
Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 88/412 (21%), Positives = 162/412 (39%), Gaps = 39/412 (9%)
Query: 273 LFFVLYVLIGVYFVTNLILAVVYDSFKSQLAKQVSEMDRMRRRTLGKAFNLIDNYNVGFL 332
++FV V+ G +FV NL+L V+ F + K + D + R + + Y
Sbjct: 384 VYFVSLVIFGSFFVLNLVLGVLSGEFSKEREKAKARGDFQKLREKQQLEEDLKGYLDWIT 443
Query: 333 NKEQCIKLFEELNKYRTLPNISREEFELIFDELDDTHDFKINLDEFADLCNAIALRFQKE 392
E EE N S E ++ N LC AI+
Sbjct: 444 QAEDIDPENEEEGGEEGKRNTSMPTSETESVNTENVSGEGENRGCCGSLCQAIS------ 497
Query: 393 DVPSCFENLPSIYHSPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQS 452
S ++ + +A ++S F +++ +++ +N + + E Q L
Sbjct: 498 --KSKLSRRWRRWNRFNRRRCRAAVKSVTFYWLVIVLVFLNTLTISSEHY--NQPDWLTQ 553
Query: 453 VWQEVEFVFGWIYVLEMALKIYSYGFENYWRDGQNRFDFLVTWVIVIGETI----TLASP 508
+ V ++ EM +K+YS G + Y+ NRFD V I ETI + SP
Sbjct: 554 IQDIANKVLLALFTCEMLVKMYSLGLQAYFVSLFNRFDCFVV-CGGITETILVELEIMSP 612
Query: 509 NGQTFLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCI 568
G I R+LR+ ++ H VA+ L + S+ L +F I
Sbjct: 613 LG---------ISVFRCVRLLRIFKVTRHWTSLSNLVASLLNSMKSIASLLLLLFLFIII 663
Query: 569 YCSLGVQIFGGIVNAGNAKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWM-- 626
+ LG+Q+FGG N + + + F+++P ++T+F +L +W M
Sbjct: 664 FSLLGMQLFGGKFNFDETQTKRS----------TFDNFPQALLTVFQILTGEDWNAVMYD 713
Query: 627 --QSYKELTGTAWTLA-YFVSFYLITVLLLLNLVIAFVLEAFFAEMELESSE 675
+Y + + + YF+ ++ +LLN+ +A ++ L +++
Sbjct: 714 GIMAYGGPSSSGMIVCIYFIILFICGNYILLNVFLAIAVDNLADAESLNTAQ 765
>sp|Q99246|CAC1D_MOUSE Voltage-dependent L-type calcium channel subunit alpha-1D OS=Mus
musculus GN=Cacna1d PE=1 SV=3
Length = 2179
Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 131/291 (45%), Gaps = 41/291 (14%)
Query: 404 IYHSPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGW 463
I +P+ K + S+ F YM+ +++++N + + ++ Q + VF
Sbjct: 1209 IPKNPYQYKFWYVVNSSPFEYMMFVLIMLNTLCLAMQHYE--QSKMFNDAMDILNMVFTG 1266
Query: 464 IYVLEMALKIYSYGFENYWRDGQNRFDFLVTWVIVIGETITLASPN------------GQ 511
++ +EM LK+ ++ + Y+ D N FD L+ +I ++ A P+ G
Sbjct: 1267 VFTVEMVLKVIAFKPKGYFSDAWNTFDSLIVIGSIIDVALSEADPSESETIPLPTATPGN 1326
Query: 512 TFLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQC-IYC 570
+ SN I + L R++RL++LL + R + TF+ +L PY+ + + IY
Sbjct: 1327 SEESNRISITFFRLFRVMRLVKLLSRGEGIRTLLWTFIKSFQAL-PYVALLIAMLFFIYA 1385
Query: 571 SLGVQIFGGIVNAGNAKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWM---- 626
+G+Q+FG + N ++ NF +P ++ LF WQ M
Sbjct: 1386 VIGMQMFGKVAMRDNNQI---------NRNNNFQTFPQAVLLLFRCATGEAWQEIMLACL 1436
Query: 627 -----------QSYKELT-GTAWTLAYFVSFYLITVLLLLNLVIAFVLEAF 665
+E T G+ + + YF+SFY++ L++NL +A +++ F
Sbjct: 1437 PGKLCDPDSDYNPGEEYTCGSNFAIVYFISFYMLCAFLIINLFVAVIMDNF 1487
Score = 59.7 bits (143), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 129/304 (42%), Gaps = 40/304 (13%)
Query: 406 HSPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQES-SLQSVWQEVEFVFGWI 464
++P + + F I + + N VA+ + +S S ++VE+ F I
Sbjct: 112 NNPIRRACISIVEWKPFDIFILLAIFANCVALAIYIPFPEDDSNSTNHNLEKVEYAFLII 171
Query: 465 YVLEMALKIYSYGF----ENYWRDGQNRFDFLVTWV---IVIGETITLASPNGQ--TFLS 515
+ +E LKI +YG Y R+G N DF++ V VI E +T + G + S
Sbjct: 172 FTVETFLKIIAYGLLLHPNAYVRNGWNLLDFVIVIVGLFSVILEQLTKETEGGNHSSGKS 231
Query: 516 NGEWIRYLLLARMLRLIRLLMHVQQYRGFVATFL-TLIPSLMPYLGTIFCVQCIYCSLGV 574
G ++ L R+LR +RL+ V + + + + ++P L L +F + IY +G+
Sbjct: 232 GGFDVKALRAFRVLRPLRLVSGVPSLQVVLNSIIKAMVPLLHIALLVLFVI-IIYAIIGL 290
Query: 575 QIFGGIVN-----AGNAKLEETDLAD-----------------------DDYLLFNFNDY 606
++F G ++ A + + E D A + + NF+++
Sbjct: 291 ELFIGKMHKTCFFADSDIVAEEDPAPCAFSGNGRQCTANGTECRSGWVGPNGGITNFDNF 350
Query: 607 PNGMVTLFNLLVMGNWQVWMQSYKELTGTAWTLAYFVSFYLITVLLLLNLVIAFVLEAFF 666
M+T+F + M W + + G W YFVS ++ +LNLV+ + F
Sbjct: 351 AFAMLTVFQCITMEGWTDVLYWVNDAIGWEWPWVYFVSLIILGSFFVLNLVLGVLSGEFS 410
Query: 667 AEME 670
E E
Sbjct: 411 KERE 414
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 117/270 (43%), Gaps = 31/270 (11%)
Query: 415 AFIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLEMALKIY 474
A ++S F +++ +++ +N + + E Q L + V ++ EM +K+Y
Sbjct: 538 AAVKSVTFYWLVIVLVFLNTLTISSEHY--NQPDWLTQIQDIANKVLLALFTCEMLVKMY 595
Query: 475 SYGFENYWRDGQNRFDFLVTWVIVIGETI----TLASPNGQTFLSNGEWIRYLLLARMLR 530
S G + Y+ NRFD V I ETI L SP G + R+LR
Sbjct: 596 SLGLQAYFVSLFNRFDCFVV-CGGITETILVELELMSPLG---------VSVFRCVRLLR 645
Query: 531 LIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAGNAKLEE 590
+ ++ H VA+ L + S+ L +F I+ LG+Q+FGG N + +
Sbjct: 646 IFKVTRHWTSLSNLVASLLNSMKSIASLLLLLFLFIIIFSLLGMQLFGGKFNFDETQTKR 705
Query: 591 TDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWM----QSYKELTGTAWTLA-YFVSF 645
+ F+++P ++T+F +L +W M +Y + + + YF+
Sbjct: 706 S----------TFDNFPQALLTVFQILTGEDWNAVMYDGIMAYGGPSSSGMIVCIYFIIL 755
Query: 646 YLITVLLLLNLVIAFVLEAFFAEMELESSE 675
++ +LLN+ +A ++ L +++
Sbjct: 756 FICGNYILLNVFLAIAVDNLADAESLNTAQ 785
>sp|P07293|CAC1S_RABIT Voltage-dependent L-type calcium channel subunit alpha-1S
OS=Oryctolagus cuniculus GN=CACNA1S PE=1 SV=1
Length = 1873
Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 147/343 (42%), Gaps = 61/343 (17%)
Query: 360 LIFDELDDTHDFKINLDEFADLCNAIALRFQKEDVPSCFENLPSIYHSPFSEKLKAFIRS 419
+ F E +T LD+ C AL+ + C+ I +P+ ++ + S
Sbjct: 1066 VTFQEQGETEYKNCELDKNQRQCVQYALKARPL---RCY-----IPKNPYQYQVWYVVTS 1117
Query: 420 TKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLEMALKIYSYGFE 479
+ F Y++ ++++N + + ++ Q + + + F I+ LEM LK+ ++
Sbjct: 1118 SYFEYLMFALIMLNTICLGMQHYH--QSEEMNHISDILNVAFTIIFTLEMILKLLAFKAR 1175
Query: 480 NYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNG----------------EWIR-- 521
Y+ D N FDFL IVIG I + TFL++ E R
Sbjct: 1176 GYFGDPWNVFDFL----IVIGSIIDVILSEIDTFLASSGGLYCLGGGCGNVDPDESARIS 1231
Query: 522 --YLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQC-IYCSLGVQIFG 578
+ L R++RLI+LL + R + TF+ +L PY+ + + IY +G+Q+FG
Sbjct: 1232 SAFFRLFRVMRLIKLLSRAEGVRTLLWTFIKSFQAL-PYVALLIVMLFFIYAVIGMQMFG 1290
Query: 579 GIVNAGNAKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQ--VWMQSYKELT--- 633
I ++ + NF +P ++ LF WQ + SY +L
Sbjct: 1291 KIALVDGTQINRNN---------NFQTFPQAVLLLFRCATGEAWQEILLACSYGKLCDPE 1341
Query: 634 -----------GTAWTLAYFVSFYLITVLLLLNLVIAFVLEAF 665
GT + YF+SFY++ L++NL +A +++ F
Sbjct: 1342 SDYAPGEEYTCGTNFAYYYFISFYMLCAFLIINLFVAVIMDNF 1384
Score = 70.5 bits (171), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 101/449 (22%), Positives = 196/449 (43%), Gaps = 58/449 (12%)
Query: 261 WIPAYKASRWYCLFFVLYVLIGVYFVTNLILAVVYDSFKSQLAKQVSEMDRMRRRTLGKA 320
W+ + W ++FV +L+G +F+ NL+L V+ F + K S R T K
Sbjct: 300 WVNDAIGNEWPWIYFVTLILLGSFFILNLVLGVLSGEFTKEREKAKS------RGTFQK- 352
Query: 321 FNLIDNYNVGFLNKEQCIKLFEELNKYRTLPNISREEFELIFDELDDTHDFKINLDEFAD 380
L ++Q +L E+L Y + I++ E + D ++D + K++L+E
Sbjct: 353 -----------LREKQ--QLEEDLRGYMSW--ITQGE---VMD-VEDLREGKLSLEEGGS 393
Query: 381 LCNAIALRFQKEDVPSCFENLPS--IYHSPFSEKLKAFIRSTKFGYMISIILIVNLVAVI 438
++ ++ E + + + ++ F K ++S F +++ +I+ +N +++
Sbjct: 394 DTESL---YEIEGLNKIIQFIRHWRQWNRVFRWKCHDLVKSRVFYWLVILIVALNTLSIA 450
Query: 439 VET-TLDIQESSLQSVWQEVEFVFGWIYVLEMALKIYSYGFENYWRDGQNRFDFLVTWVI 497
E + + LQ + V ++ +EM LK+Y G Y+ NRFD V
Sbjct: 451 SEHHNQPLWLTHLQDIANRVLLS---LFTIEMLLKMYGLGLRQYFMSIFNRFDCFVVCSG 507
Query: 498 VIGETITLASPNGQTFLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMP 557
++ + L T L I L R+LRL ++ + VA+ L I S+
Sbjct: 508 IL--ELLLVESGAMTPLG----ISVLRCIRLLRLFKITKYWTSLSNLVASLLNSIRSIAS 561
Query: 558 YLGTIFCVQCIYCSLGVQIFGGIVNAGNAKLEETDLADDDYLLFNFNDYPNGMVTLFNLL 617
L +F I+ LG+Q+FGG D D + NF+++P ++++F +L
Sbjct: 562 LLLLLFLFIIIFALLGMQLFGG----------RYDFEDTEVRRSNFDNFPQALISVFQVL 611
Query: 618 VMGNWQVWM-QSYKELTGTAW----TLAYFVSFYLITVLLLLNLVIAFVLEAFFAEMELE 672
+W M G ++ YF+ ++ +LLN+ +A ++ L
Sbjct: 612 TGEDWNSVMYNGIMAYGGPSYPGVLVCIYFIILFVCGNYILLNVFLAIAVDNLAEAESLT 671
Query: 673 SSEKCEEEDKDGEPRERRRRVGTKTRSQK 701
S++K + E++ + R+ R + KT +K
Sbjct: 672 SAQKAKAEER--KRRKMSRGLPDKTEEEK 698
Score = 60.8 bits (146), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/311 (21%), Positives = 130/311 (41%), Gaps = 43/311 (13%)
Query: 406 HSPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTL-DIQESSLQSVWQEVEFVFGWI 464
+P + + + F +I + + N VA+ V + + +SL +++E+ F +
Sbjct: 37 QNPLRKACISIVEWKPFETIILLTIFANCVALAVYLPMPEDDNNSLNLGLEKLEYFFLTV 96
Query: 465 YVLEMALKIYSYGF----ENYWRDGQNRFDFLVTWVIV---IGETITLASPNGQTFLSNG 517
+ +E A+KI +YGF + Y R G N DF++ ++ V I E + + N S G
Sbjct: 97 FSIEAAMKIIAYGFLFHQDAYLRSGWNVLDFIIVFLGVFTAILEQVNVIQSNTAPMSSKG 156
Query: 518 EW--IRYLLLARMLRLIRLLMHVQQYRGFV-ATFLTLIPSLMPYLGTIFCVQCIYCSLGV 574
++ L R+LR +RL+ V + + + F ++P L +F V IY +G+
Sbjct: 157 AGLDVKALRAFRVLRPLRLVSGVPSLQVVLNSIFKAMLPLFHIALLVLFMV-IIYAIIGL 215
Query: 575 QIFGG----------------IVNAGNAKLEETDLA---------------DDDYLLFNF 603
++F G + N + T ++ + +F
Sbjct: 216 ELFKGKMHKTCYYIGTDIVATVENEKPSPCARTGSGRPCTINGSECRGGWPGPNHGITHF 275
Query: 604 NDYPNGMVTLFNLLVMGNWQVWMQSYKELTGTAWTLAYFVSFYLITVLLLLNLVIAFVLE 663
+++ M+T++ + M W + + G W YFV+ L+ +LNLV+ +
Sbjct: 276 DNFGFSMLTVYQCITMEGWTDVLYWVNDAIGNEWPWIYFVTLILLGSFFILNLVLGVLSG 335
Query: 664 AFFAEMELESS 674
F E E S
Sbjct: 336 EFTKEREKAKS 346
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 69/332 (20%), Positives = 145/332 (43%), Gaps = 41/332 (12%)
Query: 272 CLFFVLYVLIGVYFVTNLILAVVYDSF---KSQLAKQVSEMDRMRRRTLGKAFNLIDNYN 328
C++F++ + G Y + N+ LA+ D+ +S + Q ++ + +RR + + L D
Sbjct: 638 CIYFIILFVCGNYILLNVFLAIAVDNLAEAESLTSAQKAKAEERKRRKMSRG--LPDKTE 695
Query: 329 VGFLNKEQCIKLFEELNKYRTLPNISR---EEFELIFDELDDTH---DFKINLDE----- 377
K K E+ K +P ++ +EFE +E+ D + DF + +E
Sbjct: 696 E---EKSVMAKKLEQKPKGEGIPTTAKLKVDEFESNVNEVKDPYPSADFPGDDEEDEPEI 752
Query: 378 -FADLCNAIA-LRFQKEDVPSCFENLPSIYHSPFSEKLKAF----IRSTKFGYMISIILI 431
+ +A L+ +++ VP S + + K++ + +T F I + ++
Sbjct: 753 PVSPRPRPLAELQLKEKAVP--IPEASSFFIFSPTNKVRVLCHRIVNATWFTNFILLFIL 810
Query: 432 VNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLEMALKIYSYGF----ENYWRDGQN 487
++ A+ E + ES + + F ++ +E+ LK+ +YG ++ R+ N
Sbjct: 811 LSSAALAAEDPIR-AESVRNQILGYFDIAFTSVFTVEIVLKMTTYGAFLHKGSFCRNYFN 869
Query: 488 RFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFVAT 547
D LV V +I ++ L S S ++ L + R+LR +R + + + V
Sbjct: 870 ILDLLVVAVSLI--SMGLES-------STISVVKILRVLRVLRPLRAINRAKGLKHVVQC 920
Query: 548 FLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGG 579
I ++ + +Q ++ +GVQ+F G
Sbjct: 921 VFVAIRTIGNIVLVTTLLQFMFACIGVQLFKG 952
>sp|Q9Z0Y8|CAC1I_RAT Voltage-dependent T-type calcium channel subunit alpha-1I OS=Rattus
norvegicus GN=Cacna1i PE=2 SV=3
Length = 2201
Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 126/268 (47%), Gaps = 25/268 (9%)
Query: 426 ISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLEMALKIYSYGFENYWRDG 485
I+ I+ +N+V + +E Q +SL++ + ++F ++VLE LK+ ++G +++D
Sbjct: 1452 ITFIICLNVVTMSLEHY--NQPTSLETALKYCNYMFTTVFVLEAVLKLVAFGLRRFFKDR 1509
Query: 486 QNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFV 545
N+ D + + V+G T+ N + N IR + + R+ R+++LL R +
Sbjct: 1510 WNQLDLAIVLLSVMGITLEEIEINAALPI-NPTIIRIMRVLRIARVLKLLKMATGMRALL 1568
Query: 546 ATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAGNAKLEETDLADDDYLLFNFND 605
T + +P + + IY +LGV++FG +V + + + F +
Sbjct: 1569 DTVVQALPQVGNLGLLFMLLFFIYAALGVELFGKLV------CNDENPCEGMSRHATFEN 1622
Query: 606 YPNGMVTLFNLLVMGNWQVWMQ-SYKELTGTAWTL---------AYFVSFYLITVLLLLN 655
+ +TLF + NW M+ + ++ T + YFVSF L +L+N
Sbjct: 1623 FGMAFLTLFQVSTGDNWNGIMKDTLRDCTHDERSCLSSLQFVSPLYFVSFVLTAQFVLIN 1682
Query: 656 LVIAFVLEAFFAEMELESSEKCEEEDKD 683
+V+A +++ L+ S K +ED +
Sbjct: 1683 VVVAVLMK------HLDDSNKEAQEDAE 1704
Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 130/281 (46%), Gaps = 30/281 (10%)
Query: 411 EKLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLEMA 470
EKL+ + S F I + ++VN V++ +E +E L ++ + VF ++ LEM
Sbjct: 589 EKLRGIVDSKYFNRGIMMAILVNTVSMGIEHHEQPEE--LTNILEICNVVFTSMFALEMI 646
Query: 471 LKIYSYGFENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLAR-ML 529
LK+ ++G +Y R+ N FD ++ + + I + G + L +R L L R M
Sbjct: 647 LKLAAFGLFDYLRNPYNIFDSIIVIISIW--EIVGQADGGLSVLRTFRLLRVLKLVRFMP 704
Query: 530 RLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAGNAKLE 589
L R L+ + + VATF L LM + IF I+ LG+ IFG +
Sbjct: 705 ALRRQLVVLMKTMDNVATFCML---LMLF---IF----IFSILGMHIFGCKFSL------ 748
Query: 590 ETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWMQSYKELTGTAWTLAYFVSFYLIT 649
TD D NF+ +VT+F +L +W V + + T T W YFV+
Sbjct: 749 RTDTGDTVPDRKNFDSLLWAIVTVFQILTQEDWNVVLYNGMAST-TPWASLYFVALMTFG 807
Query: 650 VLLLLNLVIAFVLEAFFAEM--------ELESSEKCEEEDK 682
+L NL++A ++E F AE E +SS EE DK
Sbjct: 808 NYVLFNLLVAILVEGFQAEGDANRSYSDEDQSSSNLEEFDK 848
Score = 60.8 bits (146), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 150/350 (42%), Gaps = 47/350 (13%)
Query: 350 LPNISREEFELIFDELDDTHDFKINLDEFA-DLCNAI--ALRFQKEDVPSCFENLPSIYH 406
+PNI+++ +F ++DD D + +E LC + + K D E+
Sbjct: 1057 MPNIAKD----VFTKMDDCRDRGEDEEEIDYTLCFRVRKMIDVYKPDWCEVREDWSVYLF 1112
Query: 407 SP---FSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVE-FVFG 462
SP F + I F Y++ + +N + + +E I+ S + ++ V ++F
Sbjct: 1113 SPENKFRILCQTIIAHKLFDYVVLAFIFLNCITIALERP-QIEAGSTERIFLTVSNYIFT 1171
Query: 463 WIYVLEMALKIYS----YGFENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGE 518
I+V EM LK+ S +G + Y R N D + +V +I +++AS G L
Sbjct: 1172 AIFVGEMTLKVVSLGLYFGEQAYLRSSWNVLDGFLVFVSIIDIVVSVASAGGAKILG--- 1228
Query: 519 WIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQC----IYCSLGV 574
L + R+LR +R L + + G TLI SL P +G I + C I+ LGV
Sbjct: 1229 ---VLRVLRLLRTLRPLRVISRAPGLKLVVETLISSLKP-IGNIVLICCAFFIIFGILGV 1284
Query: 575 QIFGGI------VNAGNAKLEETDLADDDYL----LFNFNDYPNGMVTLFNLLVMGNW-- 622
Q+F G V+ N +D +Y +NF++ +++LF L W
Sbjct: 1285 QLFKGKFYHCLGVDTRNIT-NRSDCVAANYRWVHHKYNFDNLGQALMSLFVLASKDGWVN 1343
Query: 623 -------QVWMQSYKELTGTAWTLAYFVSFYLITVLLLLNLVIAFVLEAF 665
V + W L YF+SF LI +LN+ + V+E F
Sbjct: 1344 IMYNGLDAVAVDQQPVTNHNPWMLLYFISFLLIVSFFVLNMFVGVVVENF 1393
>sp|Q99244|CAC1D_MESAU Voltage-dependent L-type calcium channel subunit alpha-1D
OS=Mesocricetus auratus GN=CACNA1D PE=2 SV=2
Length = 1610
Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 129/291 (44%), Gaps = 41/291 (14%)
Query: 404 IYHSPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGW 463
I +P+ K + S+ F YM+ +++++N + + ++ Q + VF
Sbjct: 1187 IPKNPYQYKFWYVVNSSPFEYMMFVLIMLNTLCLAMQHYE--QSKMFNDAMDILNMVFTG 1244
Query: 464 IYVLEMALKIYSYGFENYWRDGQNRFDFLVTWVIVIGETITLASPN------------GQ 511
++ +EM LK+ ++ + Y+ D N FD L+ +I ++ A P G
Sbjct: 1245 VFTVEMVLKVIAFKPKGYFSDAWNTFDSLIVIGSIIDVALSEADPTESESLPLPTATPGN 1304
Query: 512 TFLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQC-IYC 570
+ SN I + L R++RL++LL + R + TF+ +L PY+ + + IY
Sbjct: 1305 SEESNRISITFFRLFRVMRLVKLLSRGEGIRTLLWTFIKSFQAL-PYVALLIAMLFFIYA 1363
Query: 571 SLGVQIFGGIVNAGNAKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWM---- 626
+G+Q+FG K+ D NF +P ++ LF WQ M
Sbjct: 1364 VIGMQMFG--------KVAMRDNNQI-NRNNNFQTFPQAVLLLFRCATGEAWQEIMLACL 1414
Query: 627 -----------QSYKELT-GTAWTLAYFVSFYLITVLLLLNLVIAFVLEAF 665
+E T G+ + + YF+SFY++ L++NL +A +++ F
Sbjct: 1415 PGKLCDPDSDYNPGEEYTCGSNFAIVYFISFYMLCAFLIINLFVAVIMDNF 1465
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 135/326 (41%), Gaps = 50/326 (15%)
Query: 406 HSPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQES-SLQSVWQEVEFVFGWI 464
++P + + F I + + N VA+ + +S S ++VE+ F I
Sbjct: 111 NNPIRRACISIVEWKPFDIFILLAIFANCVALAIYIPFPEDDSNSTNHNLEKVEYAFLII 170
Query: 465 YVLEMALKIYSYGF----ENYWRDGQNRFDFLVTWV---IVIGETITLASPNGQ--TFLS 515
+ +E LKI +YG Y R+G N DF++ V VI E +T + G + S
Sbjct: 171 FTVETFLKIIAYGLLLHPNAYVRNGWNLLDFVIVIVGLFSVILEQLTKETEGGNHSSGKS 230
Query: 516 NGEWIRYLLLARMLRLIRLLMHVQQYRGFVATFL-TLIPSLMPYLGTIFCVQCIYCSLGV 574
G ++ L R+LR +RL+ V + + + + ++P L L +F + IY +G+
Sbjct: 231 GGFDVKALRAFRVLRPLRLVSGVPSLQVVLNSIIKAMVPLLHIALLVLFVI-IIYAIIGL 289
Query: 575 QIFGGIVN-----AGNAKLEETDLADDDYL-----------------------LFNFNDY 606
++F G ++ A + + E D A + + NF+++
Sbjct: 290 ELFIGKMHKTCFFADSDIVAEEDPAPCAFSGNGRQCAVNGTECRSGWVGPNGGITNFDNF 349
Query: 607 PNGMVTLFNLLVMGNWQVWMQSYKELTGTAWTLAYFVSFYLITVLLLLNLVIAFVLEAFF 666
M+T+F + M W + + G YFVS + +LNLV+ + F
Sbjct: 350 AFAMLTVFQCITMEGWTDVLYWMNDAMGFELPWVYFVSLVIFGSFFVLNLVLGVLSGEFS 409
Query: 667 AEME----------LESSEKCEEEDK 682
E E L +E+ EE+ K
Sbjct: 410 KEREKAKARGDFQKLRENEQLEEDLK 435
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 87/412 (21%), Positives = 161/412 (39%), Gaps = 39/412 (9%)
Query: 273 LFFVLYVLIGVYFVTNLILAVVYDSFKSQLAKQVSEMDRMRRRTLGKAFNLIDNYNVGFL 332
++FV V+ G +FV NL+L V+ F + K + D + R + + Y
Sbjct: 383 VYFVSLVIFGSFFVLNLVLGVLSGEFSKEREKAKARGDFQKLRENEQLEEDLKGYLDWIT 442
Query: 333 NKEQCIKLFEELNKYRTLPNISREEFELIFDELDDTHDFKINLDEFADLCNAIALRFQKE 392
E EE N S E ++ LC AI+
Sbjct: 443 QAEDIDPENEEEGGEEGKRNTSMPTSETESVNTENVSGEGETQGSCGSLCQAIS------ 496
Query: 393 DVPSCFENLPSIYHSPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQS 452
S ++ + +A ++S F +++ +++ +N + + E Q L
Sbjct: 497 --KSKLSRRWRRWNRFNRRRCRAAVKSVTFYWLVIVLVFLNTLTISSEHY--NQPDWLTQ 552
Query: 453 VWQEVEFVFGWIYVLEMALKIYSYGFENYWRDGQNRFDFLVTWVIVIGETI----TLASP 508
+ V ++ EM +K+YS G + Y+ NRFD V I ETI L SP
Sbjct: 553 IQDIANKVLLALFTCEMLVKMYSLGLQAYFVSLFNRFDCFVV-CGGITETILVELELMSP 611
Query: 509 NGQTFLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCI 568
G + R+LR+ ++ H VA+ L + S+ L +F I
Sbjct: 612 LG---------VSVFRCVRLLRIFKVTRHWTSLSNLVASLLNSMKSIASLLLLLFLFIII 662
Query: 569 YCSLGVQIFGGIVNAGNAKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWM-- 626
+ LG+Q+FGG N + + + F+++P ++T+F +L +W M
Sbjct: 663 FSLLGMQLFGGKFNFDETQTKRS----------TFDNFPQALLTVFQILTGEDWNAVMYD 712
Query: 627 --QSYKELTGTAWTLA-YFVSFYLITVLLLLNLVIAFVLEAFFAEMELESSE 675
+Y + + + YF+ ++ +LLN+ +A ++ L +++
Sbjct: 713 GIMAYGGPSSSGMIVCIYFIILFICGNYILLNVFLAIAVDNLADAESLNTAQ 764
>sp|Q15878|CAC1E_HUMAN Voltage-dependent R-type calcium channel subunit alpha-1E OS=Homo
sapiens GN=CACNA1E PE=1 SV=3
Length = 2313
Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 98/425 (23%), Positives = 183/425 (43%), Gaps = 37/425 (8%)
Query: 267 ASRWYCLFFVLYVLIGVYFVTNLILAVVYDSFKSQLAKQVSEMDRMRRRTLGKAFNLIDN 326
+ W L+F+ ++IG +FV NL+L V+ F + + + M+ R + ++
Sbjct: 323 GATWNWLYFIPLIIIGSFFVLNLVLGVLSGEFAKERERVENRRAFMKLRRQQQIERELNG 382
Query: 327 YNVGFLNKEQCIKLFEELNKYRT-------LPNISREEFELIFDELDDTHDFKINLDEFA 379
Y +++K + + L EE T I R E + + D H +++
Sbjct: 383 YRA-WIDKAEEVMLAEENKNAGTSALEVLRRATIKRSRTEAMTRDSSDEH--CVDISSVG 439
Query: 380 DLCNAIALRFQKEDVPSCFENLPSIYHSPFSEKLKAFIRSTKFGYMISIILIVNLVAVIV 439
+++ K D S F + + ++ ++S F +++ ++ +N V +
Sbjct: 440 TPLARASIKSAKVDGVSYFRHKERL----LRISIRHMVKSQVFYWIVLSLVALNTACVAI 495
Query: 440 ETTLDIQESSLQSVWQEVEFVFGWIYVLEMALKIYSYGFENYWRDGQNRFDFLVTWVIVI 499
Q L + EF+F +++LEM+LK+Y G Y+ N FDF VT V I
Sbjct: 496 --VHHNQPQWLTHLLYYAEFLFLGLFLLEMSLKMYGMGPRLYFHSSFNCFDFGVT-VGSI 552
Query: 500 GETITLASPNGQTFLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYL 559
E + G +F I L R+LR+ ++ + R V + ++ + S++ L
Sbjct: 553 FEVVWAIFRPGTSF-----GISVLRALRLLRIFKITKYWASLRNLVVSLMSSMKSIISLL 607
Query: 560 GTIFCVQCIYCSLGVQIFGGIVNAGNAKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVM 619
+F ++ LG+Q+FGG N +D NF+ +P ++T+F +L
Sbjct: 608 FLLFLFIVVFALLGMQLFGGRFN-----------FNDGTPSANFDTFPAAIMTVFQILTG 656
Query: 620 GNWQVWM----QSYKELTGTAWTLAYFVSFYLITVLLLLNLVIAFVLEAFFAEMELESSE 675
+W M +S ++ W+ YF+ L LLN+ +A ++ EL E
Sbjct: 657 EDWNEVMYNGIRSQGGVSSGMWSAIYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDE 716
Query: 676 KCEEE 680
+ EEE
Sbjct: 717 QEEEE 721
Score = 73.2 bits (178), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 126/284 (44%), Gaps = 36/284 (12%)
Query: 401 LPSIYHSPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFV 460
+P H+ F ++ F+ S F Y I ++ +N V ++++ + + + +
Sbjct: 1460 MPQNRHT-FQYRVWHFVVSPSFEYTIMAMIALNTVVLMMKYY--SAPCTYELALKYLNIA 1516
Query: 461 FGWIYVLEMALKIYSYGFENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWI 520
F ++ LE LK+ ++GF NY+RD N FDF + VIG + + + ++G +
Sbjct: 1517 FTMVFSLECVLKVIAFGFLNYFRDTWNIFDF----ITVIGSITEIILTDSKLVNTSGFNM 1572
Query: 521 RYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQ-CIYCSLGVQIFGG 579
+L L R RLI+LL R + TF+ +L PY+ + + IY +G+Q+F
Sbjct: 1573 SFLKLFRAARLIKLLRQGYTIRILLWTFVQSFKAL-PYVCLLIAMLFFIYAIIGMQVF-- 1629
Query: 580 IVNAGNAKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWM------------- 626
GN KL+E + NF + ++ LF WQ M
Sbjct: 1630 ----GNIKLDEESHINRHN---NFRSFFGSLMLLFRSATGEAWQEIMLSCLGEKGCEPDT 1682
Query: 627 -----QSYKELTGTAWTLAYFVSFYLITVLLLLNLVIAFVLEAF 665
Q+ E GT YFVSF L+LNL +A +++ F
Sbjct: 1683 TAPSGQNENERCGTDLAYVYFVSFIFFCSFLMLNLFVAVIMDNF 1726
Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/285 (21%), Positives = 117/285 (41%), Gaps = 36/285 (12%)
Query: 414 KAFIRSTKFGYMISIILIVNLVAVIVETTL-DIQESSLQSVWQEVEFVFGWIYVLEMALK 472
K I F YMI +I N + + +E L + ++ + ++ E F I+ E +K
Sbjct: 83 KKLIDWPPFEYMILATIIANCIVLALEQHLPEDDKTPMSRRLEKTEPYFIGIFCFEAGIK 142
Query: 473 IYSYGF----ENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARM 528
I + GF +Y R+G N DF+V V+ + A + T + +R L R+
Sbjct: 143 IVALGFIFHKGSYLRNGWNVMDFIV----VLSGILATAGTHFNTHVD----LRTLRAVRV 194
Query: 529 LRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGG-------IV 581
LR ++L+ + + + + + + L+ +F ++ +G++ + G +
Sbjct: 195 LRPLKLVSGIPSLQIVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLEFYSGKLHRACFMN 254
Query: 582 NAG----------------NAKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVW 625
N+G A E D + + F++ ++T+F + M W
Sbjct: 255 NSGILEGFDPPHPCGVQGCPAGYECKDWIGPNDGITQFDNILFAVLTVFQCITMEGWTTV 314
Query: 626 MQSYKELTGTAWTLAYFVSFYLITVLLLLNLVIAFVLEAFFAEME 670
+ + + G W YF+ +I +LNLV+ + F E E
Sbjct: 315 LYNTNDALGATWNWLYFIPLIIIGSFFVLNLVLGVLSGEFAKERE 359
>sp|Q9R053|SCNBA_MOUSE Sodium channel protein type 11 subunit alpha OS=Mus musculus
GN=Scn11a PE=1 SV=2
Length = 1765
Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 134/286 (46%), Gaps = 34/286 (11%)
Query: 412 KLKAFI----RSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVL 467
K +AF+ S F +I +++ N++ ++ E+ + Q + ++ ++ + VF I+ +
Sbjct: 1335 KCQAFVFDLVTSQVFDVIILGLIVTNMIIMMAES--EGQPNEVKKIFDILNIVFVVIFTV 1392
Query: 468 EMALKIYSYGFENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLAR 527
E +K+++ ++Y+ +G N FD +V V+ I T+ N F R + LAR
Sbjct: 1393 ECLIKVFALR-QHYFTNGWNLFDCVVV-VLSIISTLVSGLENSNVFPPT--LFRIVRLAR 1448
Query: 528 MLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAGNAK 587
+ R++RL+ + R + + +PSL +F V IY G+ F +K
Sbjct: 1449 IGRILRLVRAARGIRTLLFALMMSLPSLFNIGLLLFLVMFIYAIFGMNWF--------SK 1500
Query: 588 LEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWMQSYKELTGTAWT--------- 638
++ DD +FNF+ + M+ LF + W + E + +
Sbjct: 1501 VKRGSGIDD---IFNFDTFSGSMLCLFQITTSAGWDALLNPMLESKASCNSSSQESCQQP 1557
Query: 639 ---LAYFVSFYLITVLLLLNLVIAFVLEAFFAEMELESSEKCEEED 681
+ YFVS+ +I+ L+++N+ IA +LE F E ES + E+D
Sbjct: 1558 QIAIVYFVSYIIISFLIVVNMYIAVILENFNTATE-ESEDPLGEDD 1602
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 142/324 (43%), Gaps = 55/324 (16%)
Query: 401 LPSIYHSPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFV 460
L +I PF+E I+I +IVN V + +E ++SL+ + + +V
Sbjct: 568 LQTIMTDPFTE------------LAITICIIVNTVFLAMEH--HNMDNSLKDILKIGNWV 613
Query: 461 FGWIYVLEMALKIYSYGFENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWI 520
F I++ EM LKI + +Y+R G N FD +V V + S N +FL++ +
Sbjct: 614 FTGIFIAEMCLKIIALDPYHYFRHGWNIFDSIVALVSLADVLFHKLSKN-LSFLASLRVL 672
Query: 521 RYLLLAR----MLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQI 576
R LA+ + LI+++ H G + LT++ +F I+ +G+++
Sbjct: 673 RVFKLAKSWPTLNTLIKIIGHSVGALGNLTVVLTIV---------VF----IFSVVGMRL 719
Query: 577 FGGIVNAGNAKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNW--QVWMQSYKELTG 634
FG N + + + ++ D+ + + +F +L G W +W + +E+ G
Sbjct: 720 FGAKFN------KTCSTSPESLRRWHMGDFYHSFLVVFRILC-GEWIENMW-ECMQEMEG 771
Query: 635 TAWTLAYFVSFYLITVLLLLNLVIAFVLEAFFAEMELESSEKCEEEDKDGEPRERRRRVG 694
+ + FV ++ L++LNL IA +L +F E+KDG P R+
Sbjct: 772 SPLCVIVFVLIMVVGKLVVLNLFIALLLNSF------------SNEEKDGNPEGETRKTK 819
Query: 695 TKTRSQKVDVLLHHMLSAELQKSC 718
+ + + M A LQ C
Sbjct: 820 VQLALDRFSRAFYFMARA-LQNFC 842
Score = 57.0 bits (136), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 66/314 (21%), Positives = 128/314 (40%), Gaps = 44/314 (14%)
Query: 417 IRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLEMALKIYSY 476
++ + F I +++++ A+I E ++ + + + +F +I++LEM LK ++
Sbjct: 1032 VKHSWFESFIIFVILLSSGALIFEDVNLPSRPQVEKLLKCTDNIFTFIFLLEMILKWVAF 1091
Query: 477 GFENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARMLRLIRLLM 536
GF Y+ DFL+ V+V G ++T PN ++F R LR +R L
Sbjct: 1092 GFRKYFTSAWCWLDFLI--VVVSGLSLT-NLPNLKSF-------------RNLRALRPLR 1135
Query: 537 HVQQYRGF---VATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGG----IVNAG--NAK 587
+ Q+ G V ++ IP+++ L I+C LGV F G +N N
Sbjct: 1136 ALSQFEGMKVVVNALMSAIPAILNVLLVCLIFWLIFCILGVNFFSGKFGRCINGTDINKY 1195
Query: 588 LEETDLADDDYLL----------FNFNDYPNGMVTLFNLLVMGNWQVWMQSYKELTGTAW 637
+++ + L NF++ N + L + W M + + G
Sbjct: 1196 FNASNVPNQSQCLVSNYTWKVPNVNFDNVGNAYLALLQVATYKGWLDIMNAAVDSRGKDE 1255
Query: 638 TLA---------YFVSFYLITVLLLLNLVIAFVLEAFFAEMELESSEKCEEEDKDGEPRE 688
A YFV F + LNL I +++ F + + + ++ +
Sbjct: 1256 QPAFEANLYAYLYFVVFIIFGSFFTLNLFIGVIIDNFNQQQKKLGGQDIFMTEEQKKYYN 1315
Query: 689 RRRRVGTKTRSQKV 702
+++GTK + +
Sbjct: 1316 AMKKLGTKKPQKPI 1329
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 133/347 (38%), Gaps = 72/347 (20%)
Query: 422 FGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLEMALKIYSYGFE-- 479
F I +I+N + + +++D + SS E+VF IYVLE +KI + GF
Sbjct: 131 FSMFIICTVIINCMFMANNSSVDSRPSS-----NIPEYVFIGIYVLEAVIKILARGFIVD 185
Query: 480 --NYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARMLRLIRLLMH 537
+Y RD N DF IVIG I FL N + L R R++R L
Sbjct: 186 EFSYLRDPWNWLDF-----IVIGTAI------APCFLGNK--VNNLSTLRTFRVLRALKA 232
Query: 538 VQQYRGFVATFLTLIPSLMPYLG----TIFCVQCIYCSLGVQIFGGIVNAGNAK------ 587
+ G L+ S+ + T+FC+ I+ +G Q+F GI++ K
Sbjct: 233 ISVISGLKVIVGALLRSVKKLVDVMVLTLFCLS-IFALVGQQLFMGILSQKCIKDDCGPN 291
Query: 588 --------LEETDLAD-------------------------DDYLLFNFNDYPNGMVTLF 614
++E D D DY NF+ + + +F
Sbjct: 292 AFSNKDCFVKENDSEDFIMCGNWLGRRSCPDGSTCNKTTFNPDYNYTNFDSFGWSFLAMF 351
Query: 615 NLLVMGNWQVWMQSYKELTGTAWTLAYFVSFYLITVLLLLNLVIAFVLEAFFAE-----M 669
++ +W+ + +G + + V +L + LLNL +A V A+ +
Sbjct: 352 RVMTQDSWEKLYRQILRTSGIYFVFFFVVVIFLGS-FYLLNLTLAVVTMAYEEQNRNVAA 410
Query: 670 ELESSEKCEEEDKDGEPRERRRRVGTKTRSQKVDVLLHHMLSAELQK 716
E E+ EK +E + E+ V ++ L S + +K
Sbjct: 411 ETEAKEKMFQEAQQLLREEKEALVAMGIDRTSLNSLQASSFSPKKRK 457
Score = 37.7 bits (86), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 28/42 (66%)
Query: 263 PAYKASRWYCLFFVLYVLIGVYFVTNLILAVVYDSFKSQLAK 304
PA++A+ + L+FV++++ G +F NL + V+ D+F Q K
Sbjct: 1257 PAFEANLYAYLYFVVFIIFGSFFTLNLFIGVIIDNFNQQQKK 1298
>sp|O88420|SCN8A_RAT Sodium channel protein type 8 subunit alpha OS=Rattus norvegicus
GN=Scn8a PE=1 SV=1
Length = 1978
Score = 74.7 bits (182), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 133/285 (46%), Gaps = 37/285 (12%)
Query: 416 FIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLEMALKIYS 475
F+ F +I +++ +N+V ++VET D Q ++++ + VF + E LK+++
Sbjct: 1516 FVTQQAFDIVIMMLICLNMVTMMVET--DTQSKQMENILYWINLVFVIFFTCECVLKMFA 1573
Query: 476 YGFENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARMLRLIRLL 535
Y+ G N FDF+V + ++G + LA + F+S R + LAR+ R++RL+
Sbjct: 1574 LR-HYYFTIGWNIFDFVVVILSIVG--MFLADIIEKYFVS-PTLFRVIRLARIGRILRLI 1629
Query: 536 MHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAGNAKLEETDLAD 595
+ R + + +P+L +F V I+ G+ F + + +
Sbjct: 1630 KGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFAYV---------KHEAGI 1680
Query: 596 DDYLLFNFNDYPNGMVTLFNLLVMGNWQVWMQSY----------KELTGTAWT------- 638
DD +FNF + N M+ LF + W + KE G+ +
Sbjct: 1681 DD--MFNFETFGNSMICLFQITTSAGWDGLLLPILNRPPDCSLDKEHPGSGFKGDCGNPS 1738
Query: 639 --LAYFVSFYLITVLLLLNLVIAFVLEAFFAEMELESSEKCEEED 681
+ +FVS+ +I+ L+++N+ IA +LE F E ES++ E+D
Sbjct: 1739 VGIFFFVSYIIISFLIVVNMYIAIILENFSVATE-ESADPLSEDD 1782
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 102/250 (40%), Gaps = 36/250 (14%)
Query: 446 QESSLQSVWQEVEFVFGWIYVLEMALKIYSYGFENYWRDGQNRFDFLVTWVIVIGETITL 505
Q +++++ + + VF +I++LEM LK +YGF ++ + DFL+ V ++ +
Sbjct: 1222 QRKTIRTILEYADKVFTYIFILEMLLKWTAYGFVKFFTNAWCWLDFLIVAVSLVS---LI 1278
Query: 506 ASPNGQTFLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCV 565
A+ G + L I+ L R LR +R L + R V + IPS+M L
Sbjct: 1279 ANALGYSELGA---IKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIF 1335
Query: 566 QCIYCSLGVQIFGG-----------------IVNAGN--AKLEETDLADDDY--LLFNFN 604
I+ +GV +F G IVN KL E + + + + NF+
Sbjct: 1336 WLIFSIMGVNLFAGKYHYCFNETSEIRFEIDIVNNKTDCEKLMEGNSTEIRWKNVKINFD 1395
Query: 605 DYPNGMVTLFNLLVMGNWQVWM---------QSYKELTGTAWTLAYFVSFYLITVLLLLN 655
+ G + L + W M + G + YFV F + LN
Sbjct: 1396 NVGAGYLALLQVATFKGWMDIMYAAVDSRKPDEQPDYEGNIYMYIYFVIFIIFGSFFTLN 1455
Query: 656 LVIAFVLEAF 665
L I +++ F
Sbjct: 1456 LFIGVIIDNF 1465
Score = 42.4 bits (98), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
Query: 246 SWLAYVIFEDTVQDVWIPAYK-----ASRWYCLFFVLYVLIGVYFVTNLILAVVYDSFKS 300
SW +F QD W Y+ A + Y +FFVL + +G +++ NLILAVV +++
Sbjct: 357 SWAFLALFRLMTQDYWENLYQLTLRAAGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEE 416
Query: 301 QLAKQVSEMDR 311
Q + E ++
Sbjct: 417 QNQATLEEAEQ 427
Score = 37.7 bits (86), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 82/187 (43%), Gaps = 22/187 (11%)
Query: 398 FENLPSIY-HSPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQE 456
F P++Y SPF+ IR +I + + ++ I+ + + S+ +
Sbjct: 106 FSATPALYILSPFN-----LIRRIAIKILIHSVFSMIIMCTILTNCVFMTFSNPPEWSKN 160
Query: 457 VEFVFGWIYVLEMALKIYSYGFE----NYWRDGQNRFDFLVTWVIVIGETITLASPNGQT 512
VE+ F IY E +KI + GF + RD N DF V + + E + L
Sbjct: 161 VEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYVTEFVDLG------ 214
Query: 513 FLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSL 572
N +R + R L+ I ++ ++ G + + + +M + T+FC+ ++ +
Sbjct: 215 ---NVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVM--ILTVFCLS-VFALI 268
Query: 573 GVQIFGG 579
G+Q+F G
Sbjct: 269 GLQLFMG 275
Score = 36.6 bits (83), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 87/191 (45%), Gaps = 20/191 (10%)
Query: 460 VFGWIYVLEMALKIYSYGFENYWRDGQNRFD-FLVTWVIVIGETITLASPNGQTFLSNGE 518
VF I+ EM LK+ + Y+++G N FD F+V+ ++ ++LA G + L +
Sbjct: 789 VFTGIFTAEMFLKLIAMDPYYYFQEGWNIFDGFIVSLSLM---ELSLADVEGLSVLRSFR 845
Query: 519 WIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFG 578
+R LA+ + +L+ + LTL+ +++ + I+ +G+Q+FG
Sbjct: 846 LLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVF---------IFAVVGMQLFG 896
Query: 579 GIVNAGNAKL-EETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWMQSYKELTGTAW 637
K+ +E L ++ ND+ + + +F +L G W M E+ G A
Sbjct: 897 KSYKECVCKINQECKLPR-----WHMNDFFHSFLIVFRVLC-GEWIETMWDCMEVAGQAM 950
Query: 638 TLAYFVSFYLI 648
L F+ +I
Sbjct: 951 CLIVFMMVMVI 961
Score = 35.4 bits (80), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 26/42 (61%)
Query: 263 PAYKASRWYCLFFVLYVLIGVYFVTNLILAVVYDSFKSQLAK 304
P Y+ + + ++FV++++ G +F NL + V+ D+F Q K
Sbjct: 1430 PDYEGNIYMYIYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKK 1471
>sp|Q02789|CAC1S_MOUSE Voltage-dependent L-type calcium channel subunit alpha-1S OS=Mus
musculus GN=Cacna1s PE=1 SV=2
Length = 1880
Score = 74.3 bits (181), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 81/343 (23%), Positives = 147/343 (42%), Gaps = 61/343 (17%)
Query: 360 LIFDELDDTHDFKINLDEFADLCNAIALRFQKEDVPSCFENLPSIYHSPFSEKLKAFIRS 419
+ F E +T LD+ C AL+ + C+ I +P+ ++ + S
Sbjct: 1066 VTFQEQGETEYKNCELDKNQRQCVQYALKARPL---RCY-----IPKNPYQYQVWYVVTS 1117
Query: 420 TKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLEMALKIYSYGFE 479
+ F Y++ ++++N + + ++ Q + + + F I+ LEM LK+ ++
Sbjct: 1118 SYFEYLMFALIMLNTICLGMQHY--NQSEQMNHISDILNVAFTIIFTLEMVLKLIAFKPR 1175
Query: 480 NYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNG----------------EWIR-- 521
Y+ D N FDFL IVIG I + TFL++ E R
Sbjct: 1176 AYFGDPWNVFDFL----IVIGSIIDVILSEIDTFLASSGGLYCLGGGCGNVDPDESARIS 1231
Query: 522 --YLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQC-IYCSLGVQIFG 578
+ L R++RL++LL + R + TF+ +L PY+ + + IY +G+Q+FG
Sbjct: 1232 SAFFRLFRVMRLVKLLNRAEGVRTLLWTFIKSFQAL-PYVALLIVMLFFIYAVIGMQMFG 1290
Query: 579 GIVNAGNAKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQ--VWMQSYKELT--- 633
I ++ + NF +P ++ LF WQ + SY +L
Sbjct: 1291 KIAMVDGTQINRNN---------NFQTFPQAVLLLFRCATGEAWQEILLACSYGKLCDPE 1341
Query: 634 -----------GTAWTLAYFVSFYLITVLLLLNLVIAFVLEAF 665
GT + YF+SFY++ L++NL +A +++ F
Sbjct: 1342 SDYAPGEEHTCGTNFAYYYFISFYMLCAFLIINLFVAVIMDNF 1384
Score = 73.6 bits (179), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 105/451 (23%), Positives = 195/451 (43%), Gaps = 63/451 (13%)
Query: 261 WIPAYKASRWYCLFFVLYVLIGVYFVTNLILAVVYDSFKSQLAKQVSEMDRMRRRTLGKA 320
W+ + W ++FV +L+G +F+ NL+L V+ F + K S R T K
Sbjct: 300 WVNDAIGNEWPWIYFVTLILLGSFFILNLVLGVLSGEFTKEREKAKS------RGTFQK- 352
Query: 321 FNLIDNYNVGFLNKEQCIKLFEELNKYRTLPNISREEFELIFDELDDTHDFKINLDEFAD 380
L ++Q +L E+L Y + I++ E + D +DD + K++LDE
Sbjct: 353 -----------LREKQ--QLEEDLRGYMSW--ITQGE---VMD-VDDLREGKLSLDEGGS 393
Query: 381 LCNAIALRFQKEDVPSCFENLPS--IYHSPFSEKLKAFIRSTKFGYMISIILIVNLVAVI 438
++ ++ E + + + ++ F K ++S F +++ +I+ +N +++
Sbjct: 394 DTESL---YEIEGLNKIIQFIRHWRQWNRVFRWKCHDLVKSKVFYWLVILIVALNTLSIA 450
Query: 439 VE-TTLDIQESSLQSVWQEVEFVFGWIYVLEMALKIYSYGFENYWRDGQNRFDFLVTWVI 497
E + + LQ V V ++ +EM +K+Y G Y+ NRFD V
Sbjct: 451 SEHHNQPLWLTHLQDVANRVLLT---LFTIEMLMKMYGLGLRQYFMSIFNRFDCFVVCSG 507
Query: 498 VIGETITLASPNGQTFLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMP 557
++ I L + L I L R+LRL ++ + VA+ L I S+
Sbjct: 508 IL--EILLVESGAMSPLG----ISVLRCIRLLRLFKITKYWTSLSNLVASLLNSIRSIAS 561
Query: 558 YLGTIFCVQCIYCSLGVQIFGGIVNAGNAKLEETDLADDDYLLFNFNDYPNGMVTLFNLL 617
L +F I+ LG+Q+FGG D D + NF+++P ++++F +L
Sbjct: 562 LLLLLFLFIIIFALLGMQLFGG----------RYDFEDTEVRRSNFDNFPQALISVFQVL 611
Query: 618 VMGNWQVWM----QSYKELTGTAWTLA-YFVSFYLITVLLLLNLVIAFVLEAFFAEMELE 672
+W M +Y T + YF+ ++ +LLN+ +A ++ L
Sbjct: 612 TGEDWNSVMYNGIMAYGGPTYPGVLVCIYFIILFVCGNYILLNVFLAIAVDNLAEAESLT 671
Query: 673 SSEKCEEEDKDGEPRERRRRVGTKTRSQKVD 703
S++K + E ER+RR +K K +
Sbjct: 672 SAQKAKAE-------ERKRRKMSKGLPDKSE 695
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/331 (21%), Positives = 135/331 (40%), Gaps = 48/331 (14%)
Query: 391 KEDVPSCFENLPS-----IYHSPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTL-D 444
K+ VP P +P + + + F +I + + N VA+ V + +
Sbjct: 17 KKPVPEILPRPPRALFCLTLQNPLRKACISIVEWKPFETIILLTIFANCVALAVYLPMPE 76
Query: 445 IQESSLQSVWQEVEFVFGWIYVLEMALKIYSYGF----ENYWRDGQNRFDFLVTWV---I 497
++L +++E+ F ++ +E A+KI +YGF + Y R G N DF++ ++
Sbjct: 77 DDNNTLNLGLEKLEYFFLIVFSIEAAMKIIAYGFLFHQDAYLRSGWNVLDFIIVFLGVFT 136
Query: 498 VIGETITLASPNGQTFLSNGEW--IRYLLLARMLRLIRLLMHVQQYRGFV-ATFLTLIPS 554
VI E + + N S G ++ L R+LR +RL+ V + + + F ++P
Sbjct: 137 VILEQVNIIQTNTAPMSSKGAGLDVKALRAFRVLRPLRLVSGVPSLQVVLNSIFKAMLPL 196
Query: 555 LMPYLGTIFCVQCIYCSLGVQIFGG----------------IVNAGNAKLEETDLA---- 594
L +F V IY +G+++F G + N + T
Sbjct: 197 FHIALLVLFMV-IIYAIIGLELFKGKMHKTCYFIGTDIVATVENEKPSPCARTGSGRPCT 255
Query: 595 -----------DDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWMQSYKELTGTAWTLAYFV 643
++ + +F+++ M+T++ + M W + + G W YFV
Sbjct: 256 INGSECRGGWPGPNHGITHFDNFGFSMLTVYQCISMEGWTDVLYWVNDAIGNEWPWIYFV 315
Query: 644 SFYLITVLLLLNLVIAFVLEAFFAEMELESS 674
+ L+ +LNLV+ + F E E S
Sbjct: 316 TLILLGSFFILNLVLGVLSGEFTKEREKAKS 346
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 93/461 (20%), Positives = 200/461 (43%), Gaps = 72/461 (15%)
Query: 272 CLFFVLYVLIGVYFVTNLILAVVYDSF---KSQLAKQVSEMDRMRRRTLGKAFNLIDNYN 328
C++F++ + G Y + N+ LA+ D+ +S + Q ++ + +RR + K L D
Sbjct: 638 CIYFIILFVCGNYILLNVFLAIAVDNLAEAESLTSAQKAKAEERKRRKMSKG--LPDKSE 695
Query: 329 VGFLNKEQCIKLFEELNKYRTLPNISR---EEFELIFDELDDTH---DFKINLDE----- 377
+ K E+ +K +P ++ +EFE +E+ D + DF + +E
Sbjct: 696 E---ERATVTKKLEQKSKGEGIPTTAKLKIDEFESNVNEVKDPYPSADFPGDDEEDEPEI 752
Query: 378 -FADLCNAIA-LRFQKEDVPSCFENLPSIYHSPFSEKLKAF----IRSTKFGYMISIILI 431
+ +A L+ +++ VP S + + K++ + +T F I + ++
Sbjct: 753 PVSPRPRPLAELQLKEKAVP--IPEASSFFIFSPTNKIRVLCHRIVNATWFTNFILLFIL 810
Query: 432 VNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLEMALKIYSYGF----ENYWRDGQN 487
++ A+ E + +S + + ++VF ++ +E+ LK+ +YG ++ R+ N
Sbjct: 811 LSSAALAAEDPIR-ADSMRNQILEYFDYVFTAVFTVEIVLKMTTYGAFLHKGSFCRNYFN 869
Query: 488 RFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFVAT 547
D LV V +I ++ L S S ++ L + R+LR +R + + + V
Sbjct: 870 ILDLLVVAVSLI--SMGLES-------SAISVVKILRVLRVLRPLRAINRAKGLKHVVQC 920
Query: 548 FLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAGN--AKLEETDL-------ADDD- 597
I ++ + +Q ++ +GVQ+F G + N +K+ E + D D
Sbjct: 921 VFVAIRTIGNIVLVTTLLQFMFACIGVQLFKGKFYSCNDLSKMTEEECRGYYYIYKDGDP 980
Query: 598 -----------YLLFNFNDYPNGMVTLFNLLVMGNWQVWM----QSYKELTGTAWT---- 638
+ F+F++ + M++LF + W + S +E TG +
Sbjct: 981 TQIELRPRQWIHNDFHFDNVLSAMMSLFTVSTFEGWPQLLYKAIDSNEEDTGPVYNNRVE 1040
Query: 639 -LAYFVSFYLITVLLLLNLVIAFVLEAFFAEMELESSEKCE 678
+F+ + ++ ++N+ + FV+ F + E E + CE
Sbjct: 1041 MAIFFIIYIILIAFFMMNIFVGFVIVTFQEQGETE-YKNCE 1080
>sp|Q9WTU3|SCN8A_MOUSE Sodium channel protein type 8 subunit alpha OS=Mus musculus GN=Scn8a
PE=1 SV=1
Length = 1978
Score = 74.3 bits (181), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 133/285 (46%), Gaps = 37/285 (12%)
Query: 416 FIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLEMALKIYS 475
F+ F +I +++ +N+V ++VET D Q ++++ + VF + E LK+++
Sbjct: 1516 FVTQQAFDIVIMMLICLNMVTMMVET--DTQSKQMENILYWINLVFVIFFTCECVLKMFA 1573
Query: 476 YGFENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARMLRLIRLL 535
Y+ G N FDF+V + ++G + LA + F+S R + LAR+ R++RL+
Sbjct: 1574 LR-HYYFTIGWNIFDFVVVILSIVG--MFLADIIEKYFVS-PTLFRVIRLARIGRILRLI 1629
Query: 536 MHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAGNAKLEETDLAD 595
+ R + + +P+L +F V I+ G+ F + + +
Sbjct: 1630 KGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFAYV---------KHEAGI 1680
Query: 596 DDYLLFNFNDYPNGMVTLFNLLVMGNWQVWMQSY----------KELTGTAWT------- 638
DD +FNF + N M+ LF + W + KE G+ +
Sbjct: 1681 DD--MFNFETFGNSMICLFQITTSAGWDGLLLPILNRPPDCSLDKEHPGSGFKGDCGNPS 1738
Query: 639 --LAYFVSFYLITVLLLLNLVIAFVLEAFFAEMELESSEKCEEED 681
+ +FVS+ +I+ L+++N+ IA +LE F E ES++ E+D
Sbjct: 1739 VGIFFFVSYIIISFLIVVNMYIAIILENFSVATE-ESADPLSEDD 1782
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 101/250 (40%), Gaps = 36/250 (14%)
Query: 446 QESSLQSVWQEVEFVFGWIYVLEMALKIYSYGFENYWRDGQNRFDFLVTWVIVIGETITL 505
Q +++++ + + VF +I++LEM LK +YGF ++ + DFL+ V ++ +
Sbjct: 1222 QRKTIRTILEYADKVFTYIFILEMLLKWTAYGFVKFFTNAWCWLDFLIVAVSLVS---LI 1278
Query: 506 ASPNGQTFLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCV 565
A+ G + L I+ L R LR +R L + R V + IPS+M L
Sbjct: 1279 ANALGYSELGA---IKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIF 1335
Query: 566 QCIYCSLGVQIFGGI--------------VNAGNAKLEETDLADDD-------YLLFNFN 604
I+ +GV +F G ++ N K + L + + + NF+
Sbjct: 1336 WLIFSIMGVNLFAGKYHYCFNETSEIRFEIDEVNNKTDCEKLMEGNNTEIRWKNVKINFD 1395
Query: 605 DYPNGMVTLFNLLVMGNWQVWM---------QSYKELTGTAWTLAYFVSFYLITVLLLLN 655
+ G + L + W M + G + YFV F + LN
Sbjct: 1396 NVGAGYLALLQVATFKGWMDIMYAAVDSRKPDEQPDYEGNIYMYIYFVIFIIFGSFFTLN 1455
Query: 656 LVIAFVLEAF 665
L I +++ F
Sbjct: 1456 LFIGVIIDNF 1465
Score = 42.4 bits (98), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
Query: 246 SWLAYVIFEDTVQDVWIPAYK-----ASRWYCLFFVLYVLIGVYFVTNLILAVVYDSFKS 300
SW +F QD W Y+ A + Y +FFVL + +G +++ NLILAVV +++
Sbjct: 357 SWAFLALFRLMTQDYWENLYQLTLRAAGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEE 416
Query: 301 QLAKQVSEMDR 311
Q + E ++
Sbjct: 417 QNQATLEEAEQ 427
Score = 37.4 bits (85), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 82/187 (43%), Gaps = 22/187 (11%)
Query: 398 FENLPSIY-HSPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQE 456
F P++Y SPF+ IR +I + + ++ I+ + + S+ +
Sbjct: 106 FSATPALYILSPFN-----LIRRIAIKILIHSVFSMIIMCTILTNCVFMTFSNPPEWSKN 160
Query: 457 VEFVFGWIYVLEMALKIYSYGFE----NYWRDGQNRFDFLVTWVIVIGETITLASPNGQT 512
VE+ F IY E +KI + GF + RD N DF V + + E + L
Sbjct: 161 VEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYVTEFVDLG------ 214
Query: 513 FLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSL 572
N +R + R L+ I ++ ++ G + + + +M + T+FC+ ++ +
Sbjct: 215 ---NVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVM--ILTVFCLS-VFALI 268
Query: 573 GVQIFGG 579
G+Q+F G
Sbjct: 269 GLQLFMG 275
Score = 35.4 bits (80), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 26/42 (61%)
Query: 263 PAYKASRWYCLFFVLYVLIGVYFVTNLILAVVYDSFKSQLAK 304
P Y+ + + ++FV++++ G +F NL + V+ D+F Q K
Sbjct: 1430 PDYEGNIYMYIYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKK 1471
Score = 35.4 bits (80), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 86/191 (45%), Gaps = 20/191 (10%)
Query: 460 VFGWIYVLEMALKIYSYGFENYWRDGQNRFD-FLVTWVIVIGETITLASPNGQTFLSNGE 518
VF I+ EM LK+ + Y+++G N FD F+V+ ++ + LA G + L +
Sbjct: 789 VFTGIFTAEMFLKLIAMDPYYYFQEGWNIFDGFIVSLSLM---ELGLADVEGLSVLRSFR 845
Query: 519 WIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFG 578
+R LA+ + +L+ + LTL+ +++ + I+ +G+Q+FG
Sbjct: 846 LLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVF---------IFAVVGMQLFG 896
Query: 579 GIVNAGNAKL-EETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWMQSYKELTGTAW 637
K+ +E L ++ ND+ + + +F +L G W M E+ G A
Sbjct: 897 KSYKECVCKISQECKLPR-----WHMNDFFHSFLIVFRVLC-GEWIETMWDCMEVAGQAM 950
Query: 638 TLAYFVSFYLI 648
L F+ +I
Sbjct: 951 CLIVFMMVMVI 961
>sp|Q9UQD0|SCN8A_HUMAN Sodium channel protein type 8 subunit alpha OS=Homo sapiens GN=SCN8A
PE=1 SV=1
Length = 1980
Score = 74.3 bits (181), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 133/285 (46%), Gaps = 37/285 (12%)
Query: 416 FIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLEMALKIYS 475
F+ F +I +++ +N+V ++VET D Q ++++ + VF + E LK+++
Sbjct: 1518 FVTQQAFDIVIMMLICLNMVTMMVET--DTQSKQMENILYWINLVFVIFFTCECVLKMFA 1575
Query: 476 YGFENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARMLRLIRLL 535
Y+ G N FDF+V + ++G + LA + F+S R + LAR+ R++RL+
Sbjct: 1576 LR-HYYFTIGWNIFDFVVVILSIVG--MFLADIIEKYFVS-PTLFRVIRLARIGRILRLI 1631
Query: 536 MHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAGNAKLEETDLAD 595
+ R + + +P+L +F V I+ G+ F + + +
Sbjct: 1632 KGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFAYV---------KHEAGI 1682
Query: 596 DDYLLFNFNDYPNGMVTLFNLLVMGNWQVWMQSY----------KELTGTAWT------- 638
DD +FNF + N M+ LF + W + KE G+ +
Sbjct: 1683 DD--MFNFETFGNSMICLFQITTSAGWDGLLLPILNRPPDCSLDKEHPGSGFKGDCGNPS 1740
Query: 639 --LAYFVSFYLITVLLLLNLVIAFVLEAFFAEMELESSEKCEEED 681
+ +FVS+ +I+ L+++N+ IA +LE F E ES++ E+D
Sbjct: 1741 VGIFFFVSYIIISFLIVVNMYIAIILENFSVATE-ESADPLSEDD 1784
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 99/250 (39%), Gaps = 36/250 (14%)
Query: 446 QESSLQSVWQEVEFVFGWIYVLEMALKIYSYGFENYWRDGQNRFDFLVTWVIVIGETITL 505
Q +++++ + + VF +I++LEM LK +YGF ++ + DFL+ V ++ +
Sbjct: 1224 QRKTIRTILEYADKVFTYIFILEMLLKWTAYGFVKFFTNAWCWLDFLIVAVSLVS---LI 1280
Query: 506 ASPNGQTFLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCV 565
A+ G + L I+ L R LR +R L + R V + IPS+M L
Sbjct: 1281 ANALGYSELGA---IKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIF 1337
Query: 566 QCIYCSLGVQIFGGI--------------VNAGNAKLEETDLADDD-------YLLFNFN 604
I+ +GV +F G + N K E L + + + NF+
Sbjct: 1338 WLIFSIMGVNLFAGKYHYCFNETSEIRFEIEDVNNKTECEKLMEGNNTEIRWKNVKINFD 1397
Query: 605 DYPNGMVTLFNLLVMGNWQVWM---------QSYKELTGTAWTLAYFVSFYLITVLLLLN 655
+ G + L + W M + + YFV F + LN
Sbjct: 1398 NVGAGYLALLQVATFKGWMDIMYAAVDSRKPDEQPKYEDNIYMYIYFVIFIIFGSFFTLN 1457
Query: 656 LVIAFVLEAF 665
L I +++ F
Sbjct: 1458 LFIGVIIDNF 1467
Score = 42.4 bits (98), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
Query: 246 SWLAYVIFEDTVQDVWIPAYK-----ASRWYCLFFVLYVLIGVYFVTNLILAVVYDSFKS 300
SW +F QD W Y+ A + Y +FFVL + +G +++ NLILAVV +++
Sbjct: 357 SWAFLALFRLMTQDYWENLYQLTLRAAGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEE 416
Query: 301 QLAKQVSEMDR 311
Q + E ++
Sbjct: 417 QNQATLEEAEQ 427
Score = 38.5 bits (88), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 82/187 (43%), Gaps = 22/187 (11%)
Query: 398 FENLPSIY-HSPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQE 456
F P++Y SPF+ IR +I + + ++ I+ + + S+ +
Sbjct: 106 FSATPALYILSPFN-----LIRRIAIKILIHSVFSMIIMCTILTNCVFMTFSNPPDWSKN 160
Query: 457 VEFVFGWIYVLEMALKIYSYGFE----NYWRDGQNRFDFLVTWVIVIGETITLASPNGQT 512
VE+ F IY E +KI + GF + RD N DF V + I E + L
Sbjct: 161 VEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYITEFVNLG------ 214
Query: 513 FLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSL 572
N +R + R L+ I ++ ++ G + + + +M + T+FC+ ++ +
Sbjct: 215 ---NVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVM--ILTVFCLS-VFALI 268
Query: 573 GVQIFGG 579
G+Q+F G
Sbjct: 269 GLQLFMG 275
Score = 36.6 bits (83), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 87/190 (45%), Gaps = 18/190 (9%)
Query: 460 VFGWIYVLEMALKIYSYGFENYWRDGQNRFD-FLVTWVIVIGETITLASPNGQTFLSNGE 518
VF I+ EM LK+ + Y+++G N FD F+V+ ++ ++LA G + L +
Sbjct: 791 VFTGIFTAEMFLKLIAMDPYYYFQEGWNIFDGFIVSLSLM---ELSLADVEGLSVLRSFR 847
Query: 519 WIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFG 578
+R LA+ + +L+ + LTL+ +++ + I+ +G+Q+FG
Sbjct: 848 LLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVF---------IFAVVGMQLFG 898
Query: 579 GIVNAGNAKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWMQSYKELTGTAWT 638
K+ + D + ++ +D+ + + +F +L G W M E+ G A
Sbjct: 899 KSYKECVCKINQ----DCELPRWHMHDFFHSFLIVFRVLC-GEWIETMWDCMEVAGQAMC 953
Query: 639 LAYFVSFYLI 648
L F+ +I
Sbjct: 954 LIVFMMVMVI 963
Score = 34.7 bits (78), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 26/42 (61%)
Query: 263 PAYKASRWYCLFFVLYVLIGVYFVTNLILAVVYDSFKSQLAK 304
P Y+ + + ++FV++++ G +F NL + V+ D+F Q K
Sbjct: 1432 PKYEDNIYMYIYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKK 1473
>sp|O95180|CAC1H_HUMAN Voltage-dependent T-type calcium channel subunit alpha-1H OS=Homo
sapiens GN=CACNA1H PE=1 SV=4
Length = 2353
Score = 73.9 bits (180), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 131/276 (47%), Gaps = 26/276 (9%)
Query: 409 FSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLE 468
FS KL+ + S F I + ++VN +++ VE Q L + + VF ++ LE
Sbjct: 782 FSGKLRRIVDSKYFSRGIMMAILVNTLSMGVE--YHEQPEELTNALEISNIVFTSMFALE 839
Query: 469 MALKIYSYGFENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARM 528
M LK+ + G Y R+ N FD ++ VI + E + A G + L +R L L R
Sbjct: 840 MLLKLLACGPLGYIRNPYNIFDGIIV-VISVWEIVGQAD-GGLSVLRTFRLLRVLKLVRF 897
Query: 529 LR-LIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAGNAK 587
L L R L+ + + VATF TL LM + IF I+ LG+ +FG +
Sbjct: 898 LPALRRQLVVLVKTMDNVATFCTL---LMLF---IF----IFSILGMHLFGCKFSL---- 943
Query: 588 LEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWMQSYKELTGTA-WTLAYFVSFY 646
+TD D NF+ +VT+F +L +W V + Y + T+ W YFV+
Sbjct: 944 --KTDTGDTVPDRKNFDSLLWAIVTVFQILTQEDWNVVL--YNGMASTSSWAALYFVALM 999
Query: 647 LITVLLLLNLVIAFVLEAFFAEMELESSEKCEEEDK 682
+L NL++A ++E F AE + S+ +EDK
Sbjct: 1000 TFGNYVLFNLLVAILVEGFQAEGDANRSDT--DEDK 1033
Score = 67.8 bits (164), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 132/289 (45%), Gaps = 27/289 (9%)
Query: 406 HSPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIY 465
+SP + + S I+ I+ VN++ + +E Q SL + +VF ++
Sbjct: 1603 YSPTRRSIHSLCTSHYLDLFITFIICVNVITMSMEHY--NQPKSLDEALKYCNYVFTIVF 1660
Query: 466 VLEMALKIYSYGFENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLS-NGEWIRYLL 524
V E ALK+ ++GF +++D N+ D + + ++G ITL L N IR +
Sbjct: 1661 VFEAALKLVAFGFRRFFKDRWNQLDLAIVLLSLMG--ITLEEIEMSAALPINPTIIRIMR 1718
Query: 525 LARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAG 584
+ R+ R+++LL R + T + +P + + IY +LGV++FG +
Sbjct: 1719 VLRIARVLKLLKMATGMRALLDTVVQALPQVGNLGLLFMLLFFIYAALGVELFGRL---- 1774
Query: 585 NAKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWMQ-SYKELTG--------- 634
+ E + + F+++ +TLF + NW M+ + +E +
Sbjct: 1775 --ECSEDNPCEGLSRHATFSNFGMAFLTLFRVSTGDNWNGIMKDTLRECSREDKHCLSYL 1832
Query: 635 TAWTLAYFVSFYLITVLLLLNLVIAFVLEAFFAEMELESSEKCEEEDKD 683
A + YFV+F L+ +L+N+V+A +++ LE S K ED +
Sbjct: 1833 PALSPVYFVTFVLVAQFVLVNVVVAVLMK------HLEESNKEAREDAE 1875
Score = 53.5 bits (127), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 117/288 (40%), Gaps = 41/288 (14%)
Query: 409 FSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVE-FVFGWIYVL 467
F + I F +++ + + +N V + +E DI S + V+ V ++F I+V
Sbjct: 1283 FRVSCQKVITHKMFDHVVLVFIFLNCVTIALERP-DIDPGSTERVFLSVSNYIFTAIFVA 1341
Query: 468 EMALKIYSYGF----ENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYL 523
EM +K+ + G Y + N D L+ V ++ + +AS G L L
Sbjct: 1342 EMMVKVVALGLLSGEHAYLQSSWNLLDGLLVLVSLVDIVVAMASAGGAKILG------VL 1395
Query: 524 LLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQC----IYCSLGVQIFGG 579
+ R+LR +R L + + G TLI SL P +G I + C I+ LGVQ+F G
Sbjct: 1396 RVLRLLRTLRPLRVISRAPGLKLVVETLISSLRP-IGNIVLICCAFFIIFGILGVQLFKG 1454
Query: 580 ------------IVNAGNAKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWMQ 627
I + Y NF++ +++LF L W M
Sbjct: 1455 KFYYCEGPDTRNISTKAQCRAAHYRWVRRKY---NFDNLGQALMSLFVLSSKDGWVNIMY 1511
Query: 628 SYKELTG---------TAWTLAYFVSFYLITVLLLLNLVIAFVLEAFF 666
+ G W L YF+SF LI +LN+ + V+E F
Sbjct: 1512 DGLDAVGVDQQPVQNHNPWMLLYFISFLLIVSFFVLNMFVGVVVENFH 1559
Score = 34.3 bits (77), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 8/75 (10%)
Query: 273 LFFVLYVLIGVYFVTNLILAVVYDSFKSQLAKQVSEMDRMRRRTLGKAFNLIDNYNVGFL 332
++F+L +++G +F+ NL L V+ F ++ M R R L D+ F
Sbjct: 397 IYFILLIIVGSFFMINLCLVVIATQFSETKQRESQLMREQRARHLSN-----DSTLASFS 451
Query: 333 NKEQCIKLFEELNKY 347
C +EEL KY
Sbjct: 452 EPGSC---YEELLKY 463
>sp|Q2XVR6|SC4AB_TAKRU Sodium channel protein type 4 subunit alpha B OS=Takifugu rubripes
GN=scn4ab PE=3 SV=1
Length = 1719
Score = 73.9 bits (180), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 133/294 (45%), Gaps = 36/294 (12%)
Query: 406 HSPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIY 465
+PF + + F I +++ +N+V ++VET D Q + V + VF I+
Sbjct: 1228 ENPFQGLVFDLVTKQIFDVFIMVLICLNMVTMMVET--DEQSDKKEEVLYWINVVFILIF 1285
Query: 466 VLEMALKIYSYGFENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLL 525
E LKI + +Y+ G N FDF+V + ++G + LA + F+S R + L
Sbjct: 1286 TTECTLKIIALR-RHYFSIGWNIFDFVVVILSILG--LLLADIIEKYFVS-PTLFRVIRL 1341
Query: 526 ARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAGN 585
AR+ R++RL+ + R + + +P+L +F + I+ G+ F
Sbjct: 1342 ARIGRVLRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSNF-------- 1393
Query: 586 AKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWMQSYK----------ELTGT 635
A +++ L DD +FNF + N M+ LF + W + E GT
Sbjct: 1394 AYVKKEALIDD---MFNFETFGNSMICLFMITTSAGWDGLLSPIMNTPPDCDPNVENPGT 1450
Query: 636 ---------AWTLAYFVSFYLITVLLLLNLVIAFVLEAFFAEMELESSEKCEEE 680
A +A+F ++ +++ L+++N+ IA +LE F E S CE++
Sbjct: 1451 TVRGNCGSPAIGIAFFSTYIIMSFLVVVNMFIAIILENFNVATEESSDPLCEDD 1504
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 100/416 (24%), Positives = 173/416 (41%), Gaps = 75/416 (18%)
Query: 246 SWLAYVIFEDTVQDVWIPAYK-----ASRWYCLFFVLYVLIGVYFVTNLILAVVYDSFKS 300
W +F QD W ++ A + Y +FFV+ + +G +++ NLILAVV ++
Sbjct: 370 GWAFLALFRLMTQDFWENLFQLTLRTAGKTYMIFFVVVIFLGSFYLINLILAVVAMAYAE 429
Query: 301 QLAKQVSEMDRMRRRTLGKAFNLIDNYNVGFLNKEQCIKLFEELNKYRTLPNISREEFEL 360
Q TL +A + Y ++ + +K EE R P+ + E FE
Sbjct: 430 Q-----------NEATLAEAKEKEEEY----IHILEALKKREEEQAARKEPHSTVEGFE- 473
Query: 361 IFDELDDTHDFKINLDEFADLCN----AIALRFQKEDVPSCFENLPSIYHSPFSEKLKAF 416
D H LC A A F K D C+ +L E L A
Sbjct: 474 ------DDH----------RLCPPCWYAFANIFLKWDCCGCWRHL--------KECLYAI 509
Query: 417 IRSTKFGYMISIILIVNLVAVIVE---TTLDIQESSLQSVWQEVEFVFGWIYVLEMALKI 473
+ I+I +I+N V + +E + D +E L SV VF I+ EM KI
Sbjct: 510 VMDPFVDLGITICIILNTVFMAMEHYPMSADFEE--LLSVGN---LVFTGIFTGEMVFKI 564
Query: 474 YSYGFENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARMLRLIR 533
+ Y++ G N FD ++ + ++ + LA+ G + L + +R LA+ +
Sbjct: 565 LAMDPYFYFQVGWNIFDSIIVTISLV--ELGLANVQGLSVLRSFRLMRVFKLAKSWPTLN 622
Query: 534 LLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAGNAKLEETDL 593
+L+ + LTL+ +++ + I+ +G+Q+FG N K +
Sbjct: 623 MLIKIIGNSVGALGNLTLVLAIIVF---------IFAVVGMQLFG-----KNYKDCVCRI 668
Query: 594 ADDDYL-LFNFNDYPNGMVTLFNLLVMGNWQVWMQSYKELTGTAWTLAYFVSFYLI 648
++D L ++ ND+ + + +F +L G W M E++G L F+ +I
Sbjct: 669 SEDCVLPRWHMNDFFHAFLIIFRVLC-GEWIESMWDCMEVSGQTMCLIVFMMVLVI 723
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/283 (20%), Positives = 119/283 (42%), Gaps = 36/283 (12%)
Query: 450 LQSVWQEVEFVFGWIYVLEMALKIYSYGFENYWRDGQNRFDFLVTWVIVIGETITLASPN 509
++S+ + + VF +++V+EM LK ++YGF++Y+ + DFL+ V ++ T +
Sbjct: 948 IKSILEYADKVFTYVFVMEMVLKWFAYGFKSYFSNAWCWLDFLIVDVSLVSLTANIL--- 1004
Query: 510 GQTFLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIY 569
G + L + +R L R LR +R L + R V + +PS+ L I+
Sbjct: 1005 GYSELGAIKSLRTL---RALRPLRALSRFEGMRVVVNALVGAVPSIFNVLLVCLIFWLIF 1061
Query: 570 CSLGVQIFGG----IVNAGNAKLEETDLADDD-----YLLFNFND---------YPNGMV 611
+GV +F G N + ++ +T + D+ + NF + Y N +
Sbjct: 1062 SIMGVNLFAGKFSYCFNETSQEIIDTKVVDNKTECIALIKANFTEVRWKNVKVNYDNVGI 1121
Query: 612 TLFNLLVMGNWQVW------------MQSYKELTGTAWTLAYFVSFYLITVLLLLNLVIA 659
+LL + ++ W ++S + YFV F + LNL I
Sbjct: 1122 GYLSLLQVATFKGWTDIMYAAVDSRDVESQPIYEVNLYMYLYFVIFIIFGSFFTLNLFIG 1181
Query: 660 FVLEAFFAEMELESSEKCEEEDKDGEPRERRRRVGTKTRSQKV 702
+++ F + + ++ + +++G+K + V
Sbjct: 1182 VIIDNFNQQKAKLGGQDIFMTEEQKKYYNAMKKLGSKKPQKPV 1224
Score = 38.1 bits (87), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 60/130 (46%), Gaps = 18/130 (13%)
Query: 455 QEVEFVFGWIYVLEMALKIYSYGFE----NYWRDGQNRFDFLVTWVIVIGETITLASPNG 510
+ +E+VF +IY E +KI S GF + +D N DF+V + + E + L +
Sbjct: 153 KTMEYVFTFIYTFEATIKILSRGFCVGKFTFLKDPWNWLDFMVISMAYLTELVDLGN--- 209
Query: 511 QTFLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLG-TIFCVQCIY 569
+ L R+LR ++ + + + V + + L + T+FC+ ++
Sbjct: 210 ---------VSVLRTFRVLRALKTITVIPGLKTIVGALIQSVRKLADAMVLTVFCLS-VF 259
Query: 570 CSLGVQIFGG 579
+G+Q+F G
Sbjct: 260 ALIGLQLFMG 269
Score = 37.4 bits (85), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 27/42 (64%)
Query: 263 PAYKASRWYCLFFVLYVLIGVYFVTNLILAVVYDSFKSQLAK 304
P Y+ + + L+FV++++ G +F NL + V+ D+F Q AK
Sbjct: 1152 PIYEVNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKAK 1193
>sp|C9D7C2|CAC1A_APIME Voltage-dependent calcium channel type A subunit alpha-1 OS=Apis
mellifera GN=CAC PE=2 SV=1
Length = 1904
Score = 73.9 bits (180), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 125/269 (46%), Gaps = 35/269 (13%)
Query: 412 KLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLEMAL 471
K+ + ST F Y I ++++N V ++++ Q + ++ + + F ++ +E L
Sbjct: 1215 KIWRIVVSTPFEYFIMGLIVLNTVLLMMK--FHRQSDAYKNTLKYMNMCFTGMFTVECIL 1272
Query: 472 KIYSYGFENYWRDGQNRFDFLVTWVIVIGETI-TLASPNGQTFLSNGEWIRYLLLARMLR 530
KI ++G N+++D N FDF + VIG + L G+ F++ G +L L R R
Sbjct: 1273 KIAAFGVRNFFKDAWNTFDF----ITVIGSIVDALVIEFGENFINVG----FLRLFRAAR 1324
Query: 531 LIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQ-CIYCSLGVQIFGGIVNAGNAKLE 589
LI+LL R + TF+ +L PY+ + + IY +G+Q+FG I + +
Sbjct: 1325 LIKLLRQGYTIRILLWTFVQSFKAL-PYVCLLIAMLFFIYAIIGMQVFGNIALDADTSIT 1383
Query: 590 ETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWM-----------QSYKELTGTAWT 638
+ + NF + G++ LF W M ++ K+ G
Sbjct: 1384 KHN---------NFQSFIQGLMLLFRCATGEAWPNIMLSCVKGRPCDAKAGKQEGGCGSN 1434
Query: 639 L--AYFVSFYLITVLLLLNLVIAFVLEAF 665
+ AYFVSF L+LNL +A +++ F
Sbjct: 1435 IAYAYFVSFIFFCSFLMLNLFVAVIMDNF 1463
Score = 60.1 bits (144), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 123/268 (45%), Gaps = 28/268 (10%)
Query: 413 LKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLEMALK 472
++ ++S KF + + +++ N V V VE Q L EFVF +++LEM +K
Sbjct: 561 IRKSVKSQKFYWFVIVLVFFNTVCVAVEHYG--QPQWLTDFLYFAEFVFLALFMLEMFIK 618
Query: 473 IYSYGFENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARMLRLI 532
+Y+ G Y+ NRFD +V + E I +G LS L R+LR+
Sbjct: 619 VYALGPRTYFDSSFNRFDCVVISGSIF-EVIWSEVKSGSFGLS------VLRALRLLRIF 671
Query: 533 RLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAGNAKLEETD 592
++ + + R V + L+ + S++ L +F I+ LG+Q+FGG N
Sbjct: 672 KVTKYWKSLRNLVISLLSSMRSIISLLFLLFLFILIFALLGMQLFGGQFN---------- 721
Query: 593 LADDDYLLFNFNDYPNGMVTLFNLLVMGNW-QVWMQSYKELTGTAWTLAYFVSFYLITVL 651
D NFN +P ++T+F +L +W +V Q + G + Y S Y I ++
Sbjct: 722 -FDSGTPPTNFNTFPIALLTVFQILTGEDWNEVMYQGIESQGGHKKGMIY--SLYFIVLV 778
Query: 652 L-----LLNLVIAFVLEAFFAEMELESS 674
L LLN+ +A ++ EL ++
Sbjct: 779 LFGNYTLLNVFLAIAVDNLANAQELSAA 806
Score = 43.1 bits (100), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 95/466 (20%), Positives = 182/466 (39%), Gaps = 89/466 (19%)
Query: 264 AYKASRWYCLFFVLYVLIGVYFVTNLILAVVYDSFKSQLAKQVSE-------MDRMRR-R 315
+K Y L+F++ VL G Y + N+ LA+ D+ + A+++S D+ ++ +
Sbjct: 763 GHKKGMIYSLYFIVLVLFGNYTLLNVFLAIAVDNLAN--AQELSAAENEEEEEDKQKQAQ 820
Query: 316 TLGKAFNLIDNYNVGFLNKEQCIKLFEELNKYRTLPNISREEFELIFDELDDTHDFKINL 375
+ K + N G K + + K S EE E DE DDT
Sbjct: 821 EIEKEIQSLQNPKDGGAPKVEICPPNGKGGKQ------SSEE-EKKQDEDDDTGP----- 868
Query: 376 DEFADLCNAIALRFQKEDVP--SCFENLPSIYHSPFSEKLKAFIRSTKFGYMISIILIVN 433
K +P S F P+ +P + F + I +++ ++
Sbjct: 869 ---------------KPMLPYSSMFILSPT---NPVRRAAHWVVNLRYFDFFIMVVISLS 910
Query: 434 LVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLEMALKIYSYGF----ENYWRDGQNRF 489
+A+ E + ++S V ++ F ++ +EM LKI G +Y R+ N
Sbjct: 911 SIALAAEDPV-WEDSPRNEVLNYFDYAFTGVFTVEMILKIIDLGIILHPGSYLREFWNIM 969
Query: 490 DFLVTWVIVIGETITLA-SPNGQTFLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFVATF 548
D V+VI ++ A G + N I+ L + R+LR ++ + V + +
Sbjct: 970 DA----VVVICAAVSFAFDMTGSSAGQNLSTIKSLRVLRVLRPLKTIKRVPKLKAVFDCV 1025
Query: 549 LTLIPSLMPYLGTIFCVQCIYCSLGVQIFGG--IVNAGNAKLEETDLA------DDDYLL 600
+ + +++ L Q I+ + VQ+F G + +K + D +D LL
Sbjct: 1026 VNSLKNVINILIVYILFQFIFAVIAVQLFNGKFFYCSDESKYTQQDCQGQYFVFEDGALL 1085
Query: 601 ------------FNFNDYPNGMVTLFNLLVMGNW----QVWMQSYKELTGTAWTLA---- 640
F++++ M+TLF + W Q M + E G
Sbjct: 1086 PEPKKREWQSQFFHYDNVMAAMLTLFAVQTGEGWPQILQNSMAATYEDKGPIQNFRIEMS 1145
Query: 641 -YFVSFYLITVLLLLNLVIAFVLEAFFAEMELESSEKCEEEDKDGE 685
+++ ++++ +N+ +A ++ F E+ E E +DGE
Sbjct: 1146 IFYIVYFIVFPFFFVNIFVALIIITF--------QEQGEAELQDGE 1183
Score = 42.7 bits (99), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 60/292 (20%), Positives = 119/292 (40%), Gaps = 52/292 (17%)
Query: 422 FGYMISIILIVNLVAVIVETTLDIQESS-LQSVWQEVEFVFGWIYVLEMALKIYSYGF-- 478
F Y + + +I N V + +E L Q+ + L + E F I+ +E +LKI + GF
Sbjct: 170 FEYAVLLTIIANCVVLALEEHLPKQDKTILAQKLEATEIYFLGIFCVEASLKILALGFVL 229
Query: 479 --ENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARMLRLIRLLM 536
+Y R+ N DF V V+ IT S + + +R L R+LR ++L+
Sbjct: 230 HRGSYLRNIWNIMDFFV----VVTGFITAFSQGIELDMD----LRTLRAIRVLRPLKLVS 281
Query: 537 HVQQYRGFVATFL-TLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAG-------NAKL 588
+ + + + + + P L L +F + I+ +G++ + G ++ N +
Sbjct: 282 GIPSLQVVLKSIIKAMAPLLQIGLLVLFAI-VIFAIIGLEFYSGTLHKTCYSIRDINVIV 340
Query: 589 EETDLAD------------------------------DDYLLFNFNDYPNGMVTLFNLLV 618
+E + A ++ + +F++ M+T+F +
Sbjct: 341 KEGEQASPCNTDNKSEAPFGAHVCDANISTCMDHWEGPNFGITSFDNIGFAMLTVFQCIT 400
Query: 619 MGNWQVWMQSYKELTGTAWTLAYFVSFYLITVLLLLNLVIAFVLEAFFAEME 670
M W + + G+ + YF+ ++ +LNLV+ + F E E
Sbjct: 401 MEGWTAILYWTNDALGSTYNWIYFIPLIVLGSFFMLNLVLGVLSGEFAKERE 452
>sp|Q24270|CAC1D_DROME Voltage-dependent calcium channel type D subunit alpha-1
OS=Drosophila melanogaster GN=Ca-alpha1D PE=1 SV=2
Length = 2516
Score = 73.9 bits (180), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 104/455 (22%), Positives = 199/455 (43%), Gaps = 60/455 (13%)
Query: 267 ASRWYCLFFVLYVLIGVYFVTNLILAVVYDSFKSQL--AKQVSEMDRMRRRTLGKAFNLI 324
S W ++F+ V++G +FV NLIL V+ F + AK + ++R + I
Sbjct: 850 GSDWQWMYFISMVILGAFFVMNLILGVLSGEFSKERNKAKNRGDFQKLREK------QQI 903
Query: 325 DNYNVGFLNKEQCIKLFEELNKYRTLPNISREEFELIFDELDDTHDFKINLDEFADLCNA 384
+ G+L+ I E++ IS + + +E+D T NL E
Sbjct: 904 EEDLRGYLD---WITQAEDIEPDAVGGLISDGKGKQP-NEMDSTE----NLGEEMPEVQM 955
Query: 385 IALRFQKEDVPSCFENLPSIYHSPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTLD 444
R++K + F+ + + + ++S F ++I +++ +N + E
Sbjct: 956 TESRWRK--MKKDFDRV----NRRMRRACRKAVKSQAFYWLIIVLVFLNTGVLATEHYG- 1008
Query: 445 IQESSLQSVWQEVEFVFGWIYVLEMALKIYSYGFENYWRDGQNRFDFLVTWVIVIGETIT 504
Q L + + F ++ EM LK+YS GF+ Y+ NRFD V VIG +IT
Sbjct: 1009 -QLDWLDNFQEYTNVFFIGLFTCEMLLKMYSLGFQGYFVSLFNRFDCFV----VIG-SIT 1062
Query: 505 LASPNGQTFLSNGE-----WIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYL 559
+T L+N + L R+LR+ ++ + + VA+ L I S+ L
Sbjct: 1063 ------ETLLTNTGMMPPLGVSVLRCVRLLRVFKVTKYWRSLSNLVASLLNSIQSIASLL 1116
Query: 560 GTIFCVQCIYCSLGVQIFGGIVNAGNAKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVM 619
+F I+ LG+Q+FGG N D ++ Y + NF+ + ++T+F ++
Sbjct: 1117 LLLFLFIVIFALLGMQVFGGKFN--------FDGKEEKYRM-NFDCFWQALLTVFQIMTG 1167
Query: 620 GNWQ----VWMQSYKELTG-TAWTLAYFVSFYLITVLLLLNLVIAFVLEAFFAEMELESS 674
+W V + +Y ++ A YF+ ++ +LLN+ +A ++ L +
Sbjct: 1168 EDWNAVMYVGINAYGGVSSYGALACIYFIILFICGNYILLNVFLAIAVD------NLADA 1221
Query: 675 EKCEEEDKDGEPRERRRRVGTKTRSQKVDVLLHHM 709
+ E +K+ EP + + + + + +D + H+
Sbjct: 1222 DSLSEVEKEEEPHDESAQKKSHSPTPTIDGMDDHL 1256
Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 125/289 (43%), Gaps = 57/289 (19%)
Query: 416 FIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVW-----QEVEFVFGWIYVLEMA 470
F+ S+ F Y I I++++N V + ++ Q +W + +F ++ LE
Sbjct: 1659 FVTSSSFEYTIFILIMINTVTLAMKFYN-------QPLWYTELLDALNMIFTAVFALEFV 1711
Query: 471 LKIYSYGFENYWRDGQNRFDFLV-----------------TWVIVIGETITLASPNGQTF 513
K+ ++ F+NY+ D N FDF++ T I + + ++
Sbjct: 1712 FKLAAFRFKNYFGDAWNVFDFIIVLGSFIDIVYSEIKSKDTSQIAECDIVEGCKSTKKSA 1771
Query: 514 LSNGEWIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQ-CIYCSL 572
SN I + L R++RL++LL + R + TF+ +L PY+ + + IY +
Sbjct: 1772 GSNLISINFFRLFRVMRLVKLLSKGEGIRTLLWTFIKSFQAL-PYVALLIVLLFFIYAVV 1830
Query: 573 GVQIFGGI-VNAGNAKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWMQSYK- 630
G+Q+FG I ++ GNA NF + ++ LF WQ M S
Sbjct: 1831 GMQVFGKIALDGGNAITANN----------NFQTFQQAVLVLFRSATGEAWQEIMMSCSA 1880
Query: 631 --------------ELTGTAWTLAYFVSFYLITVLLLLNLVIAFVLEAF 665
E G++ YF+SFY++ L++NL +A +++ F
Sbjct: 1881 QPDVKCDMNSDTPGEPCGSSIAYPYFISFYVLCSFLIINLFVAVIMDNF 1929
Score = 66.2 bits (160), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 122/277 (44%), Gaps = 39/277 (14%)
Query: 422 FGYMISIILIVNLVAVIVETTLDIQESSL-QSVWQEVEFVFGWIYVLEMALKIYSYGF-- 478
F ++I + + N +A+ V T +S++ ++VE+VF I+ E +KI +YGF
Sbjct: 617 FEFLILLTIFANCIALAVYTPYPGSDSNVTNQTLEKVEYVFLVIFTAECVMKILAYGFVL 676
Query: 479 --ENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARMLRLIRLLM 536
Y R+G N DF ++VIG T S + + ++ L R+LR +RL+
Sbjct: 677 HNGAYLRNGWNLLDFT---IVVIGAISTALS----QLMKDAFDVKALRAFRVLRPLRLVS 729
Query: 537 HVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAG-----NAKLEET 591
V + + + L + L + V IY +G+++F G ++ + EE
Sbjct: 730 GVPSLQVVLNSILKAMVPLFHIALLVLFVIIIYAIIGLELFSGKLHKACRDEITGEYEEN 789
Query: 592 --------------------DLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWMQSYKE 631
D +D + NF+++ M+T+F + + W + S ++
Sbjct: 790 IRPCGVGYQCPPGYKCYGGWDGPNDG--ITNFDNFGLAMLTVFQCVTLEGWTDVLYSIQD 847
Query: 632 LTGTAWTLAYFVSFYLITVLLLLNLVIAFVLEAFFAE 668
G+ W YF+S ++ ++NL++ + F E
Sbjct: 848 AMGSDWQWMYFISMVILGAFFVMNLILGVLSGEFSKE 884
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 94/469 (20%), Positives = 185/469 (39%), Gaps = 80/469 (17%)
Query: 260 VWIPAYKASRWY----CLFFVLYVLIGVYFVTNLILAVVYDSFK-----SQLAKQVSEMD 310
V I AY Y C++F++ + G Y + N+ LA+ D+ S++ K+ D
Sbjct: 1176 VGINAYGGVSSYGALACIYFIILFICGNYILLNVFLAIAVDNLADADSLSEVEKEEEPHD 1235
Query: 311 RMRRRTLGKAFNLIDNYNVGFLNKEQCIKLFEELNKYRTLPNISREEFELIFDELDDTHD 370
++ ID ++ I + E + L + + + E + DE
Sbjct: 1236 ESAQKKSHSPTPTIDG-----MDDHLSIDIDME---QQELDDEDKMDHETLSDEEVREMC 1287
Query: 371 FKINLDEFADLCNAIALRFQKEDVPSCFENLP---SIYHSPFSEKLKAFIR----STKFG 423
+ + + A R + + + +P S + + + + F + FG
Sbjct: 1288 EEEEEVDEEGMITARPRRMSEVNTATKILPIPPGTSFFLFSQTNRFRVFCHWLCNHSNFG 1347
Query: 424 YMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLEMALKIYSYGFENYWR 483
+I ++ + + E L + L V + ++ F ++ +E+ LK+ SYGF
Sbjct: 1348 NIILCCIMFSSAMLAAENPLRANDD-LNKVLNKFDYFFTAVFTIELILKLISYGF--VLH 1404
Query: 484 DG---QNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARMLRLIRLLMHVQQ 540
DG ++ F+ L V+ + ++S N I + + R+LR++R L + +
Sbjct: 1405 DGAFCRSAFNLLDLLVVCVSLISLVSSSNA---------ISVVKILRVLRVLRPLRAINR 1455
Query: 541 YRGFVATFLTLIPSLMPYLGTIFCVQCI----YCSLGVQIFGG----------------- 579
+G +I ++ +G I V C+ + +GVQ+F G
Sbjct: 1456 AKGLKHVVQCVIVAVK-TIGNIVLVTCLLQFMFAVIGVQLFKGKFFKCTDGSKMTQDECY 1514
Query: 580 ----IVNAGN---AKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQ----VWMQS 628
+ + G+ +L E + +++ F+F+D GM+TLF + W V + S
Sbjct: 1515 GTYLVYDDGDVHKPRLREREWSNN---RFHFDDVAKGMLTLFTVSTFEGWPGLLYVSIDS 1571
Query: 629 YKELTGTAWTLAYFV-----SFYLITVLLLLNLVIAFVLEAFFAEMELE 672
KE G V + +I ++N+ + FV+ F E E E
Sbjct: 1572 NKENGGPIHNFRPIVAAYYIIYIIIIAFFMVNIFVGFVIVTFQNEGEQE 1620
>sp|P04774|SCN1A_RAT Sodium channel protein type 1 subunit alpha OS=Rattus norvegicus
GN=Scn1a PE=2 SV=1
Length = 2009
Score = 73.6 bits (179), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 131/286 (45%), Gaps = 38/286 (13%)
Query: 416 FIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLEMALKIYS 475
F+ F I I++ +N+V ++VET D Q + S+ + VF ++ E LK+ S
Sbjct: 1537 FVTRQVFDISIMILICLNMVTMMVET--DDQSDYVTSILSRINLVFIVLFTGECVLKLIS 1594
Query: 476 YGFENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARMLRLIRLL 535
Y+ G N FDF+V + ++G + LA + F+S R + LAR+ R++RL+
Sbjct: 1595 LR-HYYFTIGWNIFDFVVVILSIVG--MFLAELIEKYFVS-PTLFRVIRLARIGRILRLI 1650
Query: 536 MHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAGNAKLEETDLAD 595
+ R + + +P+L +F V IY G+ F + + ++
Sbjct: 1651 KGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYV---------KREVGI 1701
Query: 596 DDYLLFNFNDYPNGMVTLFNLLVMGNWQVWM-------------------QSYKELTGT- 635
DD +FNF + N M+ LF + W + S K G
Sbjct: 1702 DD--MFNFETFGNSMICLFQITTSAGWDGLLAPILNSKPPDCDPNKVNPGSSVKGDCGNP 1759
Query: 636 AWTLAYFVSFYLITVLLLLNLVIAFVLEAFFAEMELESSEKCEEED 681
+ + +FVS+ +I+ L+++N+ IA +LE F E ES+E E+D
Sbjct: 1760 SVGIFFFVSYIIISFLVVVNMYIAVILENFSVATE-ESAEPLSEDD 1804
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 104/252 (41%), Gaps = 41/252 (16%)
Query: 446 QESSLQSVWQEVEFVFGWIYVLEMALKIYSYGFENYWRDGQNRFDFLVTWVIVIGETITL 505
Q +++++ + + VF +I++LEM LK +YG++ Y+ + DFL+ V ++ T
Sbjct: 1244 QRKTIKTMLEYADKVFTYIFILEMLLKWVAYGYQTYFTNAWCWLDFLIVDVSLVSLT--- 1300
Query: 506 ASPNGQTFLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCV 565
A+ G + L + +R L R LR +R L + R V L IPS+M L
Sbjct: 1301 ANALGYSELGAIKSLRTL---RALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIF 1357
Query: 566 QCIYCSLGVQIFGG---------------IVNAGNAK-----LEETDLADDDYLLFNFND 605
I+ +GV +F G I N +E + A + NF++
Sbjct: 1358 WLIFSIMGVNLFAGKFYHCVNTTTGDTFEITEVNNHSDCLKLIERNETARWKNVKVNFDN 1417
Query: 606 YPNGMVTLFNLLVMGNWQVWM------------QSYKELTGTAWTLAYFVSFYLITVLLL 653
G ++L + W M Y+E + + YFV F +
Sbjct: 1418 VGFGYLSLLQVATFKGWMDIMYAAVDSRNVELQPKYEE---SLYMYLYFVIFIIFGSFFT 1474
Query: 654 LNLVIAFVLEAF 665
LNL I +++ F
Sbjct: 1475 LNLFIGVIIDNF 1486
Score = 41.2 bits (95), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
Query: 246 SWLAYVIFEDTVQDVWIPAYK-----ASRWYCLFFVLYVLIGVYFVTNLILAVVYDSFKS 300
SW +F QD W Y+ A + Y +FFVL + +G +++ NLILAVV +++
Sbjct: 369 SWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLILAVVAMAYEE 428
Query: 301 QLAKQVSEMDR 311
Q + E ++
Sbjct: 429 QNQATLEEAEQ 439
Score = 40.0 bits (92), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 131/316 (41%), Gaps = 35/316 (11%)
Query: 343 ELNKYRTLPNISREEFELIFDELDDTHDFKINLDEFADLCNAI-ALRFQKEDVPSCFENL 401
E+ K R+ F + D L+D + + + L N + L ++ P C+
Sbjct: 688 EMRKRRS------SSFHVSMDFLEDPSQRQRAMSIASILTNTVEELEESRQKCPPCWYKF 741
Query: 402 PSIY----HSPFSEKLKAFIR----STKFGYMISIILIVNLVAVIVETTLDIQESSLQSV 453
+I+ SP+ K+K + I+I +++N + + +E + V
Sbjct: 742 SNIFLIWDCSPYWLKVKHIVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEH--FNHV 799
Query: 454 WQEVEFVFGWIYVLEMALKIYSYGFENYWRDGQNRFD-FLVTWVIVIGETITLASPNGQT 512
VF I+ EM LKI + Y+++G N FD F+VT +V + LA+ G +
Sbjct: 800 LTVGNLVFTGIFTAEMFLKIIAMDPYYYFQEGWNIFDGFIVTLSLV---ELGLANVEGLS 856
Query: 513 FLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSL 572
L + +R LA+ + +L+ + LTL+ +++ + I+ +
Sbjct: 857 VLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVF---------IFAVV 907
Query: 573 GVQIFGGIVNAGNAKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWMQSYKEL 632
G+Q+FG K+ D ++ ND+ + + +F +L G W M E+
Sbjct: 908 GMQLFGKSYKDCVCKIA----TDCKLPRWHMNDFFHSFLIVFRVLC-GEWIETMWDCMEV 962
Query: 633 TGTAWTLAYFVSFYLI 648
G A L F+ +I
Sbjct: 963 AGQAMCLTVFMMVMVI 978
Score = 37.7 bits (86), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 26/42 (61%)
Query: 263 PAYKASRWYCLFFVLYVLIGVYFVTNLILAVVYDSFKSQLAK 304
P Y+ S + L+FV++++ G +F NL + V+ D+F Q K
Sbjct: 1451 PKYEESLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKK 1492
Score = 36.6 bits (83), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 120/289 (41%), Gaps = 54/289 (18%)
Query: 359 ELIFDELDDTHDFKINLDEFADLCNAIALRFQKEDVPSCFENLPSIY-HSPFSEKLKAFI 417
E++ + L+D + IN F L A+ F+ F ++Y +PF+ K I
Sbjct: 71 EMVSEPLEDLDPYYINKKTFIVLNKGKAI-FR-------FSATSALYILTPFNPLRKIAI 122
Query: 418 R---STKFGYMISIILIVNLVAVIVETTLDIQESSLQSVW-QEVEFVFGWIYVLEMALKI 473
+ + F +I ++ N V + + D W + VE+ F IY E +KI
Sbjct: 123 KILVHSLFSMLIMCTILTNCVFMTMSNPPD---------WTKNVEYTFTGIYTFESLIKI 173
Query: 474 YSYGFE----NYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARML 529
+ GF + RD N DF V + E + L N +R + R L
Sbjct: 174 IARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVDLG---------NVSALRTFRVLRAL 224
Query: 530 RLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVN------- 582
+ I ++ ++ G + + + +M + T+FC+ ++ +G+Q+F G +
Sbjct: 225 KTISVIPGLKTIVGALIQSVKKLSDVM--ILTVFCLS-VFALIGLQLFMGNLRNKCVQWP 281
Query: 583 AGNAKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVMG-NWQVWMQSYK 630
NA LEE + + DY NG TL N V +W+ ++Q +
Sbjct: 282 PTNASLEEHSIEKNVT-----TDY-NG--TLVNETVFEFDWKSYIQDSR 322
>sp|P15381|CAC1C_RABIT Voltage-dependent L-type calcium channel subunit alpha-1C
OS=Oryctolagus cuniculus GN=CACNA1C PE=1 SV=1
Length = 2171
Score = 73.6 bits (179), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 128/277 (46%), Gaps = 41/277 (14%)
Query: 417 IRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEV-EFVFGWIYVLEMALKIYS 475
+ ST F Y++ +++++N + + ++ +S L + + +F ++ +EM LK+ +
Sbjct: 1246 VNSTYFEYLMFVLILLNTICLAMQ---HYGQSCLFKIAMNILNMLFTGLFTVEMILKLIA 1302
Query: 476 YGFENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLS---NGE-----WIRYLLLAR 527
+ + Y+ D N FDFL+ +I ++ +P T S N E I + L R
Sbjct: 1303 FKPKGYFSDPWNVFDFLIVIGSIIDVILSETNPAEHTQCSPSMNAEENSRISITFFRLFR 1362
Query: 528 MLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQC-IYCSLGVQIFGGIVNAGNA 586
++RL++LL + R + TF+ +L PY+ + + IY +G+Q+FG I
Sbjct: 1363 VMRLVKLLSRGEGIRTLLWTFIKSFQAL-PYVALLIVMLFFIYAVIGMQVFGKIALNDTT 1421
Query: 587 KLEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWM------------------QS 628
++ + NF +P ++ LF WQ M
Sbjct: 1422 EINRNN---------NFQTFPQAVLLLFRCATGEAWQDIMLACMPGKKCAPESEPHNSTE 1472
Query: 629 YKELTGTAWTLAYFVSFYLITVLLLLNLVIAFVLEAF 665
+ G+++ + YF+SFY++ L++NL +A +++ F
Sbjct: 1473 GETPCGSSFAVFYFISFYMLCAFLIINLFVAVIMDNF 1509
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 93/418 (22%), Positives = 175/418 (41%), Gaps = 49/418 (11%)
Query: 273 LFFVLYVLIGVYFVTNLILAVVYDSFKSQLAKQVSEMDRMRRRTLGKAFNLIDNY----- 327
++FV V+ G +FV NL+L V+ F + K + D + R + + Y
Sbjct: 413 VYFVSLVIFGSFFVLNLVLGVLSGEFSKEREKAKARGDFQKLREKQQLEEDLKGYLDWIT 472
Query: 328 ---NVGFLNKEQCIKLFEELNKYRTLPNISREEFELIFDELDDTHDFKINLDEFADLCNA 384
++ N+++ + EE + ++P E E + E D + + C A
Sbjct: 473 QAEDIDPENEDEGMD--EEKPRNMSMPT---SETESVNTENVAGGDIE------GENCGA 521
Query: 385 -IALRFQKEDVPSCFENLPSIYHSPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTL 443
+A R K S F ++ K +A ++S F +++ ++ +N + + E
Sbjct: 522 RLAHRISK----SKFSRYWRRWNRFCRRKCRAAVKSNVFYWLVIFLVFLNTLTIASEHY- 576
Query: 444 DIQESSLQSVWQEVEFVFGWIYVLEMALKIYSYGFENYWRDGQNRFD-FLVTWVIVIGET 502
Q L V ++ EM LK+YS G + Y+ NRFD F+V I+ ET
Sbjct: 577 -NQPHWLTEVQDTANKALLALFTAEMLLKMYSLGLQAYFVSLFNRFDCFIVCGGIL--ET 633
Query: 503 ITLASPNGQTFLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTI 562
I + +T + + I L R+LR+ ++ + VA+ L + S+ L +
Sbjct: 634 ILV-----ETKVMSPLGISVLRCVRLLRIFKITRYWNSLSNLVASLLNSVRSIASLLLLL 688
Query: 563 FCVQCIYCSLGVQIFGGIVNAGNAKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNW 622
F I+ LG+Q+FGG N + + F+++P ++T+F +L +W
Sbjct: 689 FLFIIIFSLLGMQLFGGKFNFDEMQTRRS----------TFDNFPQSLLTVFQILTGEDW 738
Query: 623 QVWM-QSYKELTGTAWT----LAYFVSFYLITVLLLLNLVIAFVLEAFFAEMELESSE 675
M G ++ YF+ ++ +LLN+ +A ++ L S++
Sbjct: 739 NSVMYDGIMAYGGPSFPGMLVCIYFIILFICGNYILLNVFLAIAVDNLADAESLTSAQ 796
Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 128/307 (41%), Gaps = 47/307 (15%)
Query: 407 SPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQES-SLQSVWQEVEFVFGWIY 465
+P + + F +I + + N VA+ + +S + S + VE++F I+
Sbjct: 141 NPIRRACISIVEWKPFEIIILLTIFANCVALAIYIPFPEDDSNATNSNLERVEYLFLIIF 200
Query: 466 VLEMALKIYSYGF----ENYWRDGQNRFDFLVTWVIVIGETITLAS-PNGQTFLSN---G 517
+E LK+ +YG Y R+G N DF++ V + + A+ +G L G
Sbjct: 201 TVEAFLKVIAYGLLFHPNAYLRNGWNLLDFIIVVVGLFSAILEQATKADGANALGGKGAG 260
Query: 518 EWIRYLLLARMLRLIRLLMHVQQYRGFVATFL-TLIPSLMPYLGTIFCVQCIYCSLGVQI 576
++ L R+LR +RL+ V + + + + ++P L L +F + IY +G+++
Sbjct: 261 FDVKALRAFRVLRPLRLVSGVPSLQVVLNSIIKAMVPLLHIALLVLFVI-IIYAIIGLEL 319
Query: 577 FGGIVNAG--NAKLEETDLADDD----------------------------YLLFNFNDY 606
F G ++ N + A+DD + + NF+++
Sbjct: 320 FMGKMHKTCYNQEGVADVPAEDDPSPCALETGHGRQCQNGTVCKPGWDGPKHGITNFDNF 379
Query: 607 PNGMVTLFNLLVMGNWQ---VWMQSYKELTGTAWTLAYFVSFYLITVLLLLNLVIAFVLE 663
M+T+F + M W WMQ + G YFVS + +LNLV+ +
Sbjct: 380 AFAMLTVFQCITMEGWTDVLYWMQ---DAMGYELPWVYFVSLVIFGSFFVLNLVLGVLSG 436
Query: 664 AFFAEME 670
F E E
Sbjct: 437 EFSKERE 443
Score = 33.9 bits (76), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 52/255 (20%), Positives = 107/255 (41%), Gaps = 44/255 (17%)
Query: 458 EFVFGWIYVLEMALKIYSYGF----ENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTF 513
+ VF I+ +E+ALK+ +YG ++ R+ N D LV V +I I ++ N
Sbjct: 967 DIVFTTIFTIEIALKMTAYGAFLHKGSFCRNYFNILDLLVVSVSLISFGIQSSAIN---- 1022
Query: 514 LSNGEWIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLG 573
++ L + R+LR +R + + + V I ++ + +Q ++ +G
Sbjct: 1023 -----VVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIVIVTTLLQFMFACIG 1077
Query: 574 VQIFGGIVNAGNAKLEETDL-----------ADDDYLL----------FNFNDYPNGMVT 612
VQ+F G + + ++T+ + D+ + F+F++ M+
Sbjct: 1078 VQLFKGKLYTCSDSSKQTEAECKGNYITYKDGEVDHPIIQPRSWENSKFDFDNVLAAMMA 1137
Query: 613 LFNLLVMGNWQVWM----QSYKELTGTAWT-----LAYFVSFYLITVLLLLNLVIAFVLE 663
LF + W + S+ E G + +F+ + +I ++N+ + FV+
Sbjct: 1138 LFTVSTFEGWPELLYRSIDSHTEDKGPIYNYRVEISIFFIIYIIIIAFFMMNIFVGFVIV 1197
Query: 664 AFFAEMELESSEKCE 678
F + E E + CE
Sbjct: 1198 TFQEQGEQE-YKNCE 1211
>sp|P35498|SCN1A_HUMAN Sodium channel protein type 1 subunit alpha OS=Homo sapiens GN=SCN1A
PE=1 SV=2
Length = 2009
Score = 72.8 bits (177), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 131/286 (45%), Gaps = 38/286 (13%)
Query: 416 FIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLEMALKIYS 475
F+ F I I++ +N+V ++VET D Q + ++ + VF ++ E LK+ S
Sbjct: 1537 FVTRQVFDISIMILICLNMVTMMVET--DDQSEYVTTILSRINLVFIVLFTGECVLKLIS 1594
Query: 476 YGFENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARMLRLIRLL 535
Y+ G N FDF+V + ++G + LA + F+S R + LAR+ R++RL+
Sbjct: 1595 LR-HYYFTIGWNIFDFVVVILSIVG--MFLAELIEKYFVS-PTLFRVIRLARIGRILRLI 1650
Query: 536 MHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAGNAKLEETDLAD 595
+ R + + +P+L +F V IY G+ F + + ++
Sbjct: 1651 KGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYV---------KREVGI 1701
Query: 596 DDYLLFNFNDYPNGMVTLFNLLVMGNWQVWM-------------------QSYKELTGT- 635
DD +FNF + N M+ LF + W + S K G
Sbjct: 1702 DD--MFNFETFGNSMICLFQITTSAGWDGLLAPILNSKPPDCDPNKVNPGSSVKGDCGNP 1759
Query: 636 AWTLAYFVSFYLITVLLLLNLVIAFVLEAFFAEMELESSEKCEEED 681
+ + +FVS+ +I+ L+++N+ IA +LE F E ES+E E+D
Sbjct: 1760 SVGIFFFVSYIIISFLVVVNMYIAVILENFSVATE-ESAEPLSEDD 1804
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 105/252 (41%), Gaps = 41/252 (16%)
Query: 446 QESSLQSVWQEVEFVFGWIYVLEMALKIYSYGFENYWRDGQNRFDFLVTWVIVIGETITL 505
Q +++++ + + VF +I++LEM LK +YG++ Y+ + DFL+ V ++ T
Sbjct: 1244 QRKTIKTMLEYADKVFTYIFILEMLLKWVAYGYQTYFTNAWCWLDFLIVDVSLVSLT--- 1300
Query: 506 ASPNGQTFLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCV 565
A+ G + L + +R L R LR +R L + R V L IPS+M L
Sbjct: 1301 ANALGYSELGAIKSLRTL---RALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIF 1357
Query: 566 QCIYCSLGVQIFGG---------------IVNAGNAK-----LEETDLADDDYLLFNFND 605
I+ +GV +F G I + N +E + A + NF++
Sbjct: 1358 WLIFSIMGVNLFAGKFYHCINTTTGDRFDIEDVNNHTDCLKLIERNETARWKNVKVNFDN 1417
Query: 606 YPNGMVTLFNLLVMGNWQVWM------------QSYKELTGTAWTLAYFVSFYLITVLLL 653
G ++L + W M Y+E + + YFV F +
Sbjct: 1418 VGFGYLSLLQVATFKGWMDIMYAAVDSRNVELQPKYEE---SLYMYLYFVIFIIFGSFFT 1474
Query: 654 LNLVIAFVLEAF 665
LNL I +++ F
Sbjct: 1475 LNLFIGVIIDNF 1486
Score = 41.2 bits (95), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
Query: 246 SWLAYVIFEDTVQDVWIPAYK-----ASRWYCLFFVLYVLIGVYFVTNLILAVVYDSFKS 300
SW +F QD W Y+ A + Y +FFVL + +G +++ NLILAVV +++
Sbjct: 369 SWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLILAVVAMAYEE 428
Query: 301 QLAKQVSEMDR 311
Q + E ++
Sbjct: 429 QNQATLEEAEQ 439
Score = 40.8 bits (94), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 132/316 (41%), Gaps = 35/316 (11%)
Query: 343 ELNKYRTLPNISREEFELIFDELDDTHDFKINLDEFADLCNAI-ALRFQKEDVPSCFENL 401
E+ K R+ F + D L+D + + + L N + L ++ P C+
Sbjct: 688 EMRKRRS------SSFHVSMDFLEDPSQRQRAMSIASILTNTVEELEESRQKCPPCWYKF 741
Query: 402 PSIY----HSPFSEKLKAFIR----STKFGYMISIILIVNLVAVIVETTLDIQESSLQSV 453
+I+ SP+ K+K + I+I +++N + + +E +V
Sbjct: 742 SNIFLIWDCSPYWLKVKHVVNLVVMDPFVDLAITICIVLNTLFMAMEHY--PMTDHFNNV 799
Query: 454 WQEVEFVFGWIYVLEMALKIYSYGFENYWRDGQNRFD-FLVTWVIVIGETITLASPNGQT 512
VF I+ EM LKI + Y+++G N FD F+VT +V + LA+ G +
Sbjct: 800 LTVGNLVFTGIFTAEMFLKIIAMDPYYYFQEGWNIFDGFIVTLSLV---ELGLANVEGLS 856
Query: 513 FLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSL 572
L + +R LA+ + +L+ + LTL+ +++ + I+ +
Sbjct: 857 VLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVF---------IFAVV 907
Query: 573 GVQIFGGIVNAGNAKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWMQSYKEL 632
G+Q+FG K+ +D ++ ND+ + + +F +L G W M E+
Sbjct: 908 GMQLFGKSYKDCVCKIA----SDCQLPRWHMNDFFHSFLIVFRVLC-GEWIETMWDCMEV 962
Query: 633 TGTAWTLAYFVSFYLI 648
G A L F+ +I
Sbjct: 963 AGQAMCLTVFMMVMVI 978
Score = 38.1 bits (87), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 120/289 (41%), Gaps = 54/289 (18%)
Query: 359 ELIFDELDDTHDFKINLDEFADLCNAIALRFQKEDVPSCFENLPSIY-HSPFSEKLKAFI 417
E++ + L+D + IN F L A+ F+ F ++Y +PF+ K I
Sbjct: 71 EMVSEPLEDLDPYYINKKTFIVLNKGKAI-FR-------FSATSALYILTPFNPLRKIAI 122
Query: 418 R---STKFGYMISIILIVNLVAVIVETTLDIQESSLQSVW-QEVEFVFGWIYVLEMALKI 473
+ + F +I ++ N V + + D W + VE+ F IY E +KI
Sbjct: 123 KILVHSLFSMLIMCTILTNCVFMTMSNPPD---------WTKNVEYTFTGIYTFESLIKI 173
Query: 474 YSYGFE----NYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARML 529
+ GF + RD N DF V + E + L N +R + R L
Sbjct: 174 IARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVDLG---------NVSALRTFRVLRAL 224
Query: 530 RLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVN------- 582
+ I ++ ++ G + + + +M + T+FC+ ++ +G+Q+F G +
Sbjct: 225 KTISVIPGLKTIVGALIQSVKKLSDVM--ILTVFCLS-VFALIGLQLFMGNLRNKCIQWP 281
Query: 583 AGNAKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVMG-NWQVWMQSYK 630
NA LEE + + + N+N TL N V +W+ ++Q +
Sbjct: 282 PTNASLEEHSIEKN--ITVNYNG------TLINETVFEFDWKSYIQDSR 322
Score = 37.7 bits (86), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 26/42 (61%)
Query: 263 PAYKASRWYCLFFVLYVLIGVYFVTNLILAVVYDSFKSQLAK 304
P Y+ S + L+FV++++ G +F NL + V+ D+F Q K
Sbjct: 1451 PKYEESLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKK 1492
>sp|Q99250|SCN2A_HUMAN Sodium channel protein type 2 subunit alpha OS=Homo sapiens GN=SCN2A
PE=1 SV=3
Length = 2005
Score = 72.8 bits (177), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 133/286 (46%), Gaps = 38/286 (13%)
Query: 416 FIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLEMALKIYS 475
F+ F I I++ +N+V ++VET D Q + ++ + VF ++ E LK+ S
Sbjct: 1527 FVTKQVFDISIMILICLNMVTMMVET--DDQSQEMTNILYWINLVFIVLFTGECVLKLIS 1584
Query: 476 YGFENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARMLRLIRLL 535
+ Y+ G N FDF+V + ++G + LA + F+S R + LAR+ R++RL+
Sbjct: 1585 LRYY-YFTIGWNIFDFVVVILSIVG--MFLAELIEKYFVS-PTLFRVIRLARIGRILRLI 1640
Query: 536 MHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAGNAKLEETDLAD 595
+ R + + +P+L +F V IY G+ F + + ++
Sbjct: 1641 KGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYV---------KREVGI 1691
Query: 596 DDYLLFNFNDYPNGMVTLFNLLVMGNWQVWMQSY-----------KELTGTAWT------ 638
DD +FNF + N M+ LF + W + K+ G++
Sbjct: 1692 DD--MFNFETFGNSMICLFQITTSAGWDGLLAPILNSGPPDCDPDKDHPGSSVKGDCGNP 1749
Query: 639 ---LAYFVSFYLITVLLLLNLVIAFVLEAFFAEMELESSEKCEEED 681
+ +FVS+ +I+ L+++N+ IA +LE F E ES+E E+D
Sbjct: 1750 SVGIFFFVSYIIISFLVVVNMYIAVILENFSVATE-ESAEPLSEDD 1794
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 103/249 (41%), Gaps = 35/249 (14%)
Query: 446 QESSLQSVWQEVEFVFGWIYVLEMALKIYSYGFENYWRDGQNRFDFLVTWVIVIGETITL 505
Q +++++ + + VF +I++LEM LK +YGF+ Y+ + DFL+ V ++ T
Sbjct: 1234 QRKTIKTMLEYADKVFTYIFILEMLLKWVAYGFQVYFTNAWCWLDFLIVDVSLVSLT--- 1290
Query: 506 ASPNGQTFLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCV 565
A+ G + L + +R L R LR +R L + R V L IPS+M L
Sbjct: 1291 ANALGYSELGAIKSLRTL---RALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIF 1347
Query: 566 QCIYCSLGVQIFGG-----------------IVN---AGNAKLEETDLADDDYLLFNFND 605
I+ +GV +F G +VN A +E A + NF++
Sbjct: 1348 WLIFSIMGVNLFAGKFYHCINYTTGEMFDVSVVNNYSECKALIESNQTARWKNVKVNFDN 1407
Query: 606 YPNGMVTLFNLLVMGNWQVWMQS---------YKELTGTAWTLAYFVSFYLITVLLLLNL 656
G ++L + W M + + + YFV F + LNL
Sbjct: 1408 VGLGYLSLLQVATFKGWMDIMYAAVDSRNVELQPKYEDNLYMYLYFVIFIIFGSFFTLNL 1467
Query: 657 VIAFVLEAF 665
I +++ F
Sbjct: 1468 FIGVIIDNF 1476
Score = 41.6 bits (96), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 129/310 (41%), Gaps = 48/310 (15%)
Query: 333 NKEQCIKLFEELNKYRTLPNISRE-EFELIFDELDDTHDFKINLDEFADLCNAIALRFQK 391
+ E K +L ++LP I + E++ L+D + IN F L A+
Sbjct: 45 DDENGPKPNSDLEAGKSLPFIYGDIPPEMVSVPLEDLDPYYINKKTFIVLNKGKAI---- 100
Query: 392 EDVPSCFENLPSIY-HSPFSEKLKAFIR---STKFGYMISIILIVNLVAVIVETTLDIQE 447
S F P++Y +PF+ K I+ + F +I ++ N V + + D
Sbjct: 101 ----SRFSATPALYILTPFNPIRKLAIKILVHSLFNMLIMCTILTNCVFMTMSNPPD--- 153
Query: 448 SSLQSVW-QEVEFVFGWIYVLEMALKIYSYGFE----NYWRDGQNRFDFLVTWVIVIGET 502
W + VE+ F IY E +KI + GF + RD N DF V + E
Sbjct: 154 ------WTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFTVITFAYVTEF 207
Query: 503 ITLASPNGQTFLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTI 562
+ L N +R + R L+ I ++ ++ G + + + +M + T+
Sbjct: 208 VDLG---------NVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVM--ILTV 256
Query: 563 FCVQCIYCSLGVQIFGGIVNAGNAKLEETDLADDDYLLFN----FNDYPNGMVTLFNLLV 618
FC+ ++ +G+Q+F G N N L+ D+ N FN+ +G T FN V
Sbjct: 257 FCLS-VFALIGLQLFMG--NLRNKCLQWP--PDNSSFEINITSFFNNSLDGNGTTFNRTV 311
Query: 619 -MGNWQVWMQ 627
+ NW +++
Sbjct: 312 SIFNWDEYIE 321
Score = 41.2 bits (95), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
Query: 246 SWLAYVIFEDTVQDVWIPAYK-----ASRWYCLFFVLYVLIGVYFVTNLILAVVYDSFKS 300
SW +F QD W Y+ A + Y +FFVL + +G +++ NLILAVV +++
Sbjct: 371 SWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLILAVVAMAYEE 430
Query: 301 QLAKQVSEMDR 311
Q + E ++
Sbjct: 431 QNQATLEEAEQ 441
Score = 37.0 bits (84), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
Query: 235 LALGLLFLL----FSSWLAYVIFEDTVQDVWI-PAYKASRWYCLFFVLYVLIGVYFVTNL 289
+ LG L LL F W+ + ++V + P Y+ + + L+FV++++ G +F NL
Sbjct: 1408 VGLGYLSLLQVATFKGWMDIMYAAVDSRNVELQPKYEDNLYMYLYFVIFIIFGSFFTLNL 1467
Query: 290 ILAVVYDSFKSQLAK 304
+ V+ D+F Q K
Sbjct: 1468 FIGVIIDNFNQQKKK 1482
Score = 36.6 bits (83), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 103/225 (45%), Gaps = 22/225 (9%)
Query: 426 ISIILIVNLVAVIVET-TLDIQESSLQSVWQEVEFVFGWIYVLEMALKIYSYGFENYWRD 484
I+I +++N + + +E + Q SS+ SV VF I+ EM LKI + Y+++
Sbjct: 765 ITICIVLNTLFMAMEHYPMTEQFSSVLSVGN---LVFTGIFTAEMFLKIIAMDPYYYFQE 821
Query: 485 GQNRFD-FLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARMLRLIRLLMHVQQYRG 543
G N FD F+V+ ++ + LA+ G + L + +R LA+ + +L+ +
Sbjct: 822 GWNIFDGFIVSLSLM---ELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSV 878
Query: 544 FVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAGNAKLEETDLADDDYLLFNF 603
LTL+ +++ + I+ +G+Q+FG K+ D + ++
Sbjct: 879 GALGNLTLVLAIIVF---------IFAVVGMQLFGKSYKECVCKISN----DCELPRWHM 925
Query: 604 NDYPNGMVTLFNLLVMGNWQVWMQSYKELTGTAWTLAYFVSFYLI 648
+D+ + + +F +L G W M E+ G L F+ +I
Sbjct: 926 HDFFHSFLIVFRVLC-GEWIETMWDCMEVAGQTMCLTVFMMVMVI 969
>sp|Q01815|CAC1C_MOUSE Voltage-dependent L-type calcium channel subunit alpha-1C OS=Mus
musculus GN=Cacna1c PE=1 SV=1
Length = 2139
Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 128/281 (45%), Gaps = 49/281 (17%)
Query: 417 IRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEV-EFVFGWIYVLEMALKIYS 475
+ ST F Y++ +++++N + + ++ +S L + + +F ++ +EM LK+ +
Sbjct: 1216 VNSTYFEYLMFVLILLNTICLAMQ---HYGQSCLFKIAMNILNMLFTGLFTVEMILKLIA 1272
Query: 476 YGFENYWRDGQNRFDFLVTWVIVIGETI------------TLASPNGQTFLSNGEWIRYL 523
+ + Y+ D N FDFL IVIG I T SP+ ++ I +
Sbjct: 1273 FKPKGYFSDPWNVFDFL----IVIGSIIDVILSETNPAEHTQCSPSMSAEENSRISITFF 1328
Query: 524 LLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQC-IYCSLGVQIFGGIVN 582
L R++RL++LL + R + TF+ +L PY+ + + IY +G+Q+FG I
Sbjct: 1329 RLFRVMRLVKLLSRGEGIRTLLWTFIKSFQAL-PYVALLIVMLFFIYAVIGMQVFGKIAL 1387
Query: 583 AGNAKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWM---------------- 626
++ + NF +P ++ LF WQ M
Sbjct: 1388 NDTTEINRNN---------NFQTFPQAVLLLFRCATGEAWQDIMLACMPGKKCAPESEPS 1438
Query: 627 --QSYKELTGTAWTLAYFVSFYLITVLLLLNLVIAFVLEAF 665
+ G+++ + YF+SFY++ L++NL +A +++ F
Sbjct: 1439 NSTEGETPCGSSFAVFYFISFYMLCAFLIINLFVAVIMDNF 1479
Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 93/415 (22%), Positives = 174/415 (41%), Gaps = 43/415 (10%)
Query: 273 LFFVLYVLIGVYFVTNLILAVVYDSFKSQLAKQVSEMDRMRRRTLGKAFNLIDNY----- 327
++FV V+ G +FV NL+L V+ F + K + D + R + + Y
Sbjct: 383 VYFVSLVIFGSFFVLNLVLGVLSGEFSKEREKAKARGDFQKLREKQQLEEDLKGYLDWIT 442
Query: 328 NVGFLNKEQCIKLFEELNKYRTLPNISREEFELIFDELDDTHDFKINLDEFADLCNA-IA 386
++ E + +E +K R + ++ E E + E D + + C A +A
Sbjct: 443 QAEDIDPENEDEGMDE-DKPRNM-SMPTSETESVNTENVAGGDIE------GENCGARLA 494
Query: 387 LRFQKEDVPSCFENLPSIYHSPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQ 446
R K S F ++ K +A ++S F +++ ++ +N + + E Q
Sbjct: 495 HRISK----SKFSRYWRRWNRFCRRKCRAAVKSNVFYWLVIFLVFLNTLTIASEHY--NQ 548
Query: 447 ESSLQSVWQEVEFVFGWIYVLEMALKIYSYGFENYWRDGQNRFD-FLVTWVIVIGETITL 505
L V ++ EM LK+YS G + Y+ NRFD F+V I+ ETI +
Sbjct: 549 PHWLTEVQDTANKALLALFTAEMLLKMYSLGLQAYFVSLFNRFDCFIVCGGIL--ETILV 606
Query: 506 ASPNGQTFLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCV 565
+T + + I L R+LR+ ++ + VA+ L + S+ L +F
Sbjct: 607 -----ETKIMSPLGISVLRCVRLLRIFKITRYWNSLSNLVASLLNSVRSIASLLLLLFLF 661
Query: 566 QCIYCSLGVQIFGGIVNAGNAKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVW 625
I+ LG+Q+FGG N + + F+++P ++T+F +L +W
Sbjct: 662 IIIFSLLGMQLFGGKFNFDEMQTRRS----------TFDNFPQSLLTVFQILTGEDWNSV 711
Query: 626 M-QSYKELTGTAWT----LAYFVSFYLITVLLLLNLVIAFVLEAFFAEMELESSE 675
M G ++ YF+ ++ +LLN+ +A ++ L S++
Sbjct: 712 MYDGIMAYGGPSFPGMLVCIYFIILFICGNYILLNVFLAIAVDNLADAESLTSAQ 766
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/307 (21%), Positives = 125/307 (40%), Gaps = 47/307 (15%)
Query: 407 SPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQES-SLQSVWQEVEFVFGWIY 465
+P + + F +I + + N VA+ + +S + S + VE++F I+
Sbjct: 111 NPIRRACISIVEWKPFEIIILLTIFANCVALAIYIPFPEDDSNATNSNLERVEYLFLIIF 170
Query: 466 VLEMALKIYSYGF----ENYWRDGQNRFDFLVTWVIVIGETITLAS-PNGQTFLSN---G 517
+E LK+ +YG Y R+G N DF++ V + + A+ +G L G
Sbjct: 171 TVEAFLKVIAYGLLFHPNAYLRNGWNLLDFIIVVVGLFSAILEQATKADGANALGGKGAG 230
Query: 518 EWIRYLLLARMLRLIRLLMHVQQYRGFVATFL-TLIPSLMPYLGTIFCVQCIYCSLGVQI 576
++ L R+LR +RL+ V + + + + ++P L L +F + IY +G+++
Sbjct: 231 FDVKALRAFRVLRPLRLVSGVPSLQVVLNSIIKAMVPLLHIALLVLFVI-IIYAIIGLEL 289
Query: 577 FGGIVN------------------------------AGNAKLEETDLADDDYLLFNFNDY 606
F G ++ N + + + + NF+++
Sbjct: 290 FMGKMHKTCYNQEGIIDVPAEEDPSPCALETGHGRQCQNGTVCKPGWDGPKHGITNFDNF 349
Query: 607 PNGMVTLFNLLVMGNWQ---VWMQSYKELTGTAWTLAYFVSFYLITVLLLLNLVIAFVLE 663
M+T+F + M W WMQ + G YFVS + +LNLV+ +
Sbjct: 350 AFAMLTVFQCITMEGWTDVLYWMQ---DAMGYELPWVYFVSLVIFGSFFVLNLVLGVLSG 406
Query: 664 AFFAEME 670
F E E
Sbjct: 407 EFSKERE 413
Score = 35.4 bits (80), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 58/297 (19%), Positives = 127/297 (42%), Gaps = 47/297 (15%)
Query: 417 IRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQS-VWQEVEFVFGWIYVLEMALKIYS 475
+ T F +I ++++ +++ E +Q +S ++ + ++VF I+ LE+ LK+ +
Sbjct: 897 VNDTIFTNLILFFILLSSISLAAEDP--VQHTSFRNHILGNADYVFTSIFTLEIILKMTA 954
Query: 476 YGF----ENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARMLRL 531
YG ++ R+ N D LV V +I I ++ N ++ L + R+LR
Sbjct: 955 YGAFLHKGSFCRNYFNILDLLVVSVSLISFGIQSSAIN---------VVKILRVLRVLRP 1005
Query: 532 IRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAGNAKLEET 591
+R + + + V I ++ + +Q ++ +GVQ+F G + + ++T
Sbjct: 1006 LRAINRAKGLKHVVQCVFVAIRTIGNIVIVTTLLQFMFACIGVQLFKGKLYTCSDSSKQT 1065
Query: 592 DL-----------ADDDYLL----------FNFNDYPNGMVTLFNLLVMGNWQVWM---- 626
+ + D+ + F+F++ M+ LF + W +
Sbjct: 1066 EAECKGNYITYKDGEVDHPIIQPRSWENSKFDFDNVLAAMMALFTVSTFEGWPELLYRSI 1125
Query: 627 QSYKELTGTAWT-----LAYFVSFYLITVLLLLNLVIAFVLEAFFAEMELESSEKCE 678
S+ E G + +F+ + +I ++N+ + FV+ F + E E + CE
Sbjct: 1126 DSHTEDKGPIYNYRVEISIFFIIYIIIIAFFMMNIFVGFVIVTFQEQGEQE-YKNCE 1181
>sp|P04775|SCN2A_RAT Sodium channel protein type 2 subunit alpha OS=Rattus norvegicus
GN=Scn2a PE=1 SV=1
Length = 2005
Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 132/286 (46%), Gaps = 38/286 (13%)
Query: 416 FIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLEMALKIYS 475
F+ F I I++ +N+V ++VET D Q + ++ + VF ++ E LK+ S
Sbjct: 1527 FVTKQVFDISIMILICLNMVTMMVET--DDQSQEMTNILYWINLVFIVLFTGECVLKLIS 1584
Query: 476 YGFENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARMLRLIRLL 535
Y+ G N FDF+V + ++G + LA + F+S R + LAR+ R++RL+
Sbjct: 1585 LR-HYYFTIGWNIFDFVVVILSIVG--MFLAELIEKYFVS-PTLFRVIRLARIGRILRLI 1640
Query: 536 MHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAGNAKLEETDLAD 595
+ R + + +P+L +F V IY G+ F + + ++
Sbjct: 1641 KGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYV---------KREVGI 1691
Query: 596 DDYLLFNFNDYPNGMVTLFNLLVMGNWQVWM-----------QSYKELTGTAWT------ 638
DD +FNF + N M+ LF + W + K+ G++
Sbjct: 1692 DD--MFNFETFGNSMICLFQITTSAGWDGLLAPILNSGPPDCDPEKDHPGSSVKGDCGNP 1749
Query: 639 ---LAYFVSFYLITVLLLLNLVIAFVLEAFFAEMELESSEKCEEED 681
+ +FVS+ +I+ L+++N+ IA +LE F E ES+E E+D
Sbjct: 1750 SVGIFFFVSYIIISFLVVVNMYIAVILENFSVATE-ESAEPLSEDD 1794
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 103/249 (41%), Gaps = 35/249 (14%)
Query: 446 QESSLQSVWQEVEFVFGWIYVLEMALKIYSYGFENYWRDGQNRFDFLVTWVIVIGETITL 505
Q +++++ + + VF +I++LEM LK +YGF+ Y+ + DFL+ V ++ T
Sbjct: 1234 QRKTIKTMLEYADKVFTYIFILEMLLKWVAYGFQMYFTNAWCWLDFLIVDVSLVSLT--- 1290
Query: 506 ASPNGQTFLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCV 565
A+ G + L + +R L R LR +R L + R V L IPS+M L
Sbjct: 1291 ANALGYSELGAIKSLRTL---RALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIF 1347
Query: 566 QCIYCSLGVQIFGG-----------------IVN---AGNAKLEETDLADDDYLLFNFND 605
I+ +GV +F G +VN A +E A + NF++
Sbjct: 1348 WLIFSIMGVNLFAGKFYHCINYTTGEMFDVSVVNNYSECQALIESNQTARWKNVKVNFDN 1407
Query: 606 YPNGMVTLFNLLVMGNWQVWMQS---------YKELTGTAWTLAYFVSFYLITVLLLLNL 656
G ++L + W M + + + YFV F + LNL
Sbjct: 1408 VGLGYLSLLQVATFKGWMDIMYAAVDSRNVELQPKYEDNLYMYLYFVIFIIFGSFFTLNL 1467
Query: 657 VIAFVLEAF 665
I +++ F
Sbjct: 1468 FIGVIIDNF 1476
Score = 41.2 bits (95), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
Query: 246 SWLAYVIFEDTVQDVWIPAYK-----ASRWYCLFFVLYVLIGVYFVTNLILAVVYDSFKS 300
SW +F QD W Y+ A + Y +FFVL + +G +++ NLILAVV +++
Sbjct: 371 SWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLILAVVAMAYEE 430
Query: 301 QLAKQVSEMDR 311
Q + E ++
Sbjct: 431 QNQATLEEAEQ 441
Score = 37.0 bits (84), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
Query: 235 LALGLLFLL----FSSWLAYVIFEDTVQDVWI-PAYKASRWYCLFFVLYVLIGVYFVTNL 289
+ LG L LL F W+ + ++V + P Y+ + + L+FV++++ G +F NL
Sbjct: 1408 VGLGYLSLLQVATFKGWMDIMYAAVDSRNVELQPKYEDNLYMYLYFVIFIIFGSFFTLNL 1467
Query: 290 ILAVVYDSFKSQLAK 304
+ V+ D+F Q K
Sbjct: 1468 FIGVIIDNFNQQKKK 1482
Score = 36.6 bits (83), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 107/257 (41%), Gaps = 39/257 (15%)
Query: 333 NKEQCIKLFEELNKYRTLPNISRE-EFELIFDELDDTHDFKINLDEFADLCNAIALRFQK 391
+ E K +L ++LP I + E++ + L+D + IN F L A+
Sbjct: 45 DDENGPKPNSDLEAGKSLPFIYGDIPPEMVSEPLEDLDPYYINKKTFIVLNKGKAI---- 100
Query: 392 EDVPSCFENLPSIY-HSPFSEKLKAFIR---STKFGYMISIILIVNLVAVIVETTLDIQE 447
S F ++Y +PF+ K I+ + F +I ++ N V + + D
Sbjct: 101 ----SRFSATSALYILTPFNPIRKLAIKILVHSLFNVLIMCTILTNCVFMTMSNPPD--- 153
Query: 448 SSLQSVW-QEVEFVFGWIYVLEMALKIYSYGFE----NYWRDGQNRFDFLVTWVIVIGET 502
W + VE+ F IY E +KI + GF + R+ N DF V + E
Sbjct: 154 ------WTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRNPWNWLDFTVITFAYVTEF 207
Query: 503 ITLASPNGQTFLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTI 562
+ L N +R + R L+ I ++ ++ G + + + +M + T+
Sbjct: 208 VNLG---------NVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVM--ILTV 256
Query: 563 FCVQCIYCSLGVQIFGG 579
FC+ ++ +G+Q+F G
Sbjct: 257 FCLS-VFALIGLQLFMG 272
Score = 34.3 bits (77), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 102/225 (45%), Gaps = 22/225 (9%)
Query: 426 ISIILIVNLVAVIVET-TLDIQESSLQSVWQEVEFVFGWIYVLEMALKIYSYGFENYWRD 484
I+I +++N + + +E + Q SS+ SV VF I+ EM LKI + Y+++
Sbjct: 765 ITICIVLNTLFMAMEHYPMTEQFSSVLSVGN---LVFTGIFTAEMFLKIIAMDPYYYFQE 821
Query: 485 GQNRFD-FLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARMLRLIRLLMHVQQYRG 543
G N FD F+V+ ++ + LA+ G + L + +R LA+ + +L+ +
Sbjct: 822 GWNIFDGFIVSLSLM---ELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSV 878
Query: 544 FVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAGNAKLEETDLADDDYLLFNF 603
LTL+ +++ + I+ +G+Q+FG K+ D + ++
Sbjct: 879 GALGNLTLVLAIIVF---------IFAVVGMQLFGKSYKECVCKISN----DCELPRWHM 925
Query: 604 NDYPNGMVTLFNLLVMGNWQVWMQSYKELTGTAWTLAYFVSFYLI 648
+ + + + +F +L G W M E+ G L F+ +I
Sbjct: 926 HHFFHSFLIVFRVLC-GEWIETMWDCMEVAGQTMCLTVFMMVMVI 969
>sp|Q02485|CAC1S_RAT Voltage-dependent L-type calcium channel subunit alpha-1S
(Fragment) OS=Rattus norvegicus GN=Cacna1s PE=1 SV=1
Length = 1146
Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/343 (23%), Positives = 145/343 (42%), Gaps = 61/343 (17%)
Query: 360 LIFDELDDTHDFKINLDEFADLCNAIALRFQKEDVPSCFENLPSIYHSPFSEKLKAFIRS 419
+ F E +T LD+ C AL+ + C+ I +P+ ++ + S
Sbjct: 353 VTFQEQGETEYKNCELDKNQRQCVQYALKARPL---RCY-----IPKNPYQYQVWYVVTS 404
Query: 420 TKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLEMALKIYSYGFE 479
+ F Y++ ++++N + + ++ Q + + + F I+ LEM LK+ ++
Sbjct: 405 SYFEYLMFALIMLNTICLGMQHY--NQSEQMNHISDILNVAFTIIFTLEMILKLIAFKPR 462
Query: 480 NYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNG----------------EWIR-- 521
Y+ D N FDFL IVIG I + T L++ E R
Sbjct: 463 GYFGDPWNVFDFL----IVIGSIIDVILSEIDTLLASSGGLYCLGGGCGNVDPDESARIS 518
Query: 522 --YLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQC-IYCSLGVQIFG 578
+ L R++RLI+LL + R + TF+ +L PY+ + + IY +G+Q+FG
Sbjct: 519 SAFFRLFRVMRLIKLLSRAEGVRTLLWTFIKSFQAL-PYVALLIVMLFFIYAVIGMQMFG 577
Query: 579 GIVNAGNAKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQ--VWMQSYKE----- 631
I ++ + NF +P ++ LF WQ + SY +
Sbjct: 578 KIAMVDGTQINRNN---------NFQTFPQAVLLLFRCATGEAWQEILLACSYGKRCDPE 628
Query: 632 ---------LTGTAWTLAYFVSFYLITVLLLLNLVIAFVLEAF 665
GT + YF+SFY++ L++NL +A +++ F
Sbjct: 629 SDYAPGEEYACGTNFAYYYFISFYMLCAFLIINLFVAVIMDNF 671
Score = 36.2 bits (82), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 60/296 (20%), Positives = 129/296 (43%), Gaps = 45/296 (15%)
Query: 417 IRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLEMALKIYSY 476
+ +T F I + ++++ A+ E + +S + + ++VF ++ +E+ LK+ +Y
Sbjct: 83 VNATWFTNFILLFILLSSAALAAEDPIRA-DSMRNQILEYFDYVFTAVFTVEIVLKMTTY 141
Query: 477 GF----ENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARMLRLI 532
G ++ R+ N D LV V +I ++ L S S ++ L + R+LR +
Sbjct: 142 GAFLHKGSFCRNYFNILDLLVVAVSLI--SMGLES-------SAISVVKILRVLRVLRPL 192
Query: 533 RLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAGN--AKLEE 590
R + + + V I ++ + +Q ++ +GVQ+F G + N +K+ E
Sbjct: 193 RAINRAKGLKHVVQCVFVAIRTIGNIVLVTTLLQFMFACIGVQLFKGKFYSCNDLSKMTE 252
Query: 591 TDL-------ADDD------------YLLFNFNDYPNGMVTLFNLLVMGNWQVWM----Q 627
+ D D + F+F++ + M++LF + W +
Sbjct: 253 EECRGYYYIYKDGDPTQIELRPRQWIHNDFHFDNVLSAMMSLFTVSTFEGWPQLLYKAID 312
Query: 628 SYKELTGTAWT-----LAYFVSFYLITVLLLLNLVIAFVLEAFFAEMELESSEKCE 678
S +E TG + +F+ + ++ ++N+ + FV+ F + E E + CE
Sbjct: 313 SNEEDTGPVYNNRVEMAIFFIIYIILIAFFMMNIFVGFVIVTFQEQGETE-YKNCE 367
>sp|P08104|SCN3A_RAT Sodium channel protein type 3 subunit alpha OS=Rattus norvegicus
GN=Scn3a PE=1 SV=1
Length = 1951
Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 130/286 (45%), Gaps = 38/286 (13%)
Query: 416 FIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLEMALKIYS 475
F+ F I I++ +N+V ++VET D Q + V + VF ++ E LK+ S
Sbjct: 1473 FVTRQVFDISIMILICLNMVTMMVET--DDQSKYMTLVLSRINLVFIVLFTGEFLLKLIS 1530
Query: 476 YGFENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARMLRLIRLL 535
+ Y+ G N FDF+V + ++G + LA + F+S R + LAR+ R++RL+
Sbjct: 1531 LRYY-YFTIGWNIFDFVVVILSIVG--MFLAELIEKYFVS-PTLFRVIRLARIGRILRLI 1586
Query: 536 MHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAGNAKLEETDLAD 595
+ R + + +P+L +F V IY G+ F + + +
Sbjct: 1587 KGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYV---------KKEAGI 1637
Query: 596 DDYLLFNFNDYPNGMVTLFNLLVMGNWQVWM-------------------QSYKELTGT- 635
DD +FNF + N M+ LF + W + S K G
Sbjct: 1638 DD--MFNFETFGNSMICLFQITTSAGWDGLLAPILNSAPPDCDPDAIHPGSSVKGDCGNP 1695
Query: 636 AWTLAYFVSFYLITVLLLLNLVIAFVLEAFFAEMELESSEKCEEED 681
+ + +FVS+ +I+ L+++N+ IA +LE F E ES+E E+D
Sbjct: 1696 SVGIFFFVSYIIISFLVVVNMYIAVILENFSVATE-ESAEPLSEDD 1740
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 104/249 (41%), Gaps = 38/249 (15%)
Query: 446 QESSLQSVWQEVEFVFGWIYVLEMALKIYSYGFENYWRDGQNRFDFLVTWVIVIGETITL 505
Q +++++ + + VF +I++LEM LK +YGF+ Y+ + DFL+ V ++ +
Sbjct: 1183 QRKTIKTMLEYADKVFTYIFILEMLLKWVAYGFQTYFTNAWCWLDFLIVDVSLVS---LV 1239
Query: 506 ASPNGQTFLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCV 565
A+ G + L + +R L R LR +R L + R V + IPS+M L
Sbjct: 1240 ANALGYSELGAIKSLRTL---RALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIF 1296
Query: 566 QCIYCSLGVQIFGG----IVNAGNAKL----EETDLADDDYL---------LFNFNDYPN 608
I+ +GV +F G VN + E + +D L NF++
Sbjct: 1297 WLIFSIMGVNLFAGKFYHCVNTTTGNMFEIKEVNNFSDCQALGKQARWKNVKVNFDNVGA 1356
Query: 609 GMVTLFNLLVMGNWQVWMQS------------YKELTGTAWTLAYFVSFYLITVLLLLNL 656
G + L + W M + Y+E + YFV F + LNL
Sbjct: 1357 GYLALLQVATFKGWMDIMYAAVDSRDVKLQPIYEE---NLYMYLYFVIFIIFGSFFTLNL 1413
Query: 657 VIAFVLEAF 665
I +++ F
Sbjct: 1414 FIGVIIDNF 1422
Score = 41.2 bits (95), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
Query: 246 SWLAYVIFEDTVQDVWIPAYK-----ASRWYCLFFVLYVLIGVYFVTNLILAVVYDSFKS 300
SW +F QD W Y+ A + Y +FFVL + +G +++ NLILAVV +++
Sbjct: 370 SWAFLSLFRLMTQDYWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLVNLILAVVAMAYEE 429
Query: 301 QLAKQVSEMDR 311
Q + E ++
Sbjct: 430 QNQATLEEAEQ 440
Score = 38.5 bits (88), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 97/218 (44%), Gaps = 18/218 (8%)
Query: 426 ISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLEMALKIYSYGFENYWRDG 485
I+I +++N + + +E Q+ S SV VF I+ EM LKI + Y+++G
Sbjct: 717 ITICIVLNTLFMAMEHYPMTQQFS--SVLTVGNLVFTGIFTAEMVLKIIAMDPYYYFQEG 774
Query: 486 QNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFV 545
N FD ++ + ++ + LA+ G + L + +R LA+ + +L+ +
Sbjct: 775 WNIFDGIIVSLSLM--ELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGA 832
Query: 546 ATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAGNAKLEETDLADDDYLLFNFND 605
LTL+ +++ + I+ +G+Q+FG K+ D ++ ND
Sbjct: 833 LGNLTLVLAIIVF---------IFAVVGMQLFGKSYKECVCKIN----VDCKLPRWHMND 879
Query: 606 YPNGMVTLFNLLVMGNWQVWMQSYKELTGTAWTLAYFV 643
+ + + +F +L G W M E+ G L F+
Sbjct: 880 FFHSFLIVFRVLC-GEWIETMWDCMEVAGQTMCLIVFM 916
Score = 37.0 bits (84), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 244 FSSWLAYVIFEDTVQDVWI-PAYKASRWYCLFFVLYVLIGVYFVTNLILAVVYDSFKSQL 302
F W+ + +DV + P Y+ + + L+FV++++ G +F NL + V+ D+F Q
Sbjct: 1367 FKGWMDIMYAAVDSRDVKLQPIYEENLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQK 1426
Query: 303 AK 304
K
Sbjct: 1427 KK 1428
Score = 36.6 bits (83), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 76/174 (43%), Gaps = 17/174 (9%)
Query: 455 QEVEFVFGWIYVLEMALKIYSYGFE----NYWRDGQNRFDFLVTWVIVIGETITLASPNG 510
+ VE+ F IY E +KI + GF + RD N DF V + + E + L
Sbjct: 155 KNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFSVIVMAYVTEFVDLG---- 210
Query: 511 QTFLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYC 570
N +R + R L+ I ++ ++ G + + + +M + T+FC+ ++
Sbjct: 211 -----NVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVM--ILTVFCLS-VFA 262
Query: 571 SLGVQIFGGIVNAGNAKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVMG-NWQ 623
+G+Q+F G + ++ +D A + FN + T N+ + NW+
Sbjct: 263 LIGLQLFMGNLRNKCSQWPPSDSAFETNTTSYFNGTMDSNGTFVNVTMSTFNWK 316
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.327 0.143 0.438
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 261,295,261
Number of Sequences: 539616
Number of extensions: 11214954
Number of successful extensions: 46011
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 98
Number of HSP's successfully gapped in prelim test: 94
Number of HSP's that attempted gapping in prelim test: 44539
Number of HSP's gapped (non-prelim): 973
length of query: 720
length of database: 191,569,459
effective HSP length: 125
effective length of query: 595
effective length of database: 124,117,459
effective search space: 73849888105
effective search space used: 73849888105
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 65 (29.6 bits)