BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 004997
(720 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225428201|ref|XP_002278951.1| PREDICTED: probable alanyl-tRNA synthetase, chloroplastic [Vitis
vinifera]
gi|297744517|emb|CBI37779.3| unnamed protein product [Vitis vinifera]
Length = 1006
Score = 1229 bits (3180), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 587/718 (81%), Positives = 645/718 (89%), Gaps = 2/718 (0%)
Query: 1 MAHYYPSILPCGHFLFKGATGVP-SARSTSASVQPLTEE-VEDKSQDFPSSGDSIRKRFL 58
+A PS LPCGH K V + RSTSAS+QP+TEE VEDKS+D P+SGDSIR RFL
Sbjct: 58 LALISPSGLPCGHSNLKQTREVRFTTRSTSASIQPMTEELVEDKSKDLPTSGDSIRHRFL 117
Query: 59 DFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQRCIRTNDV 118
DFYASRGHKVLPS+SLVP+DPTVLLTIAGMLQFKPIFLGKVPRQVPRA T+QRCIRTNDV
Sbjct: 118 DFYASRGHKVLPSSSLVPDDPTVLLTIAGMLQFKPIFLGKVPRQVPRATTAQRCIRTNDV 177
Query: 119 ENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWISVYEDDDEAF 178
ENVG+TSRHHTFFEMLGNFSFGDYFKKEAI+WAWE ST+E+GLPA+RLWISVYEDDDEA
Sbjct: 178 ENVGKTSRHHTFFEMLGNFSFGDYFKKEAIKWAWELSTIEYGLPADRLWISVYEDDDEAL 237
Query: 179 EIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSDVDLGDDTRFI 238
IW KEVGVPVE IKRMGA+DNFW SG TGPCGPCSEIYYDFHP+RG SDVDLGDDTRFI
Sbjct: 238 AIWTKEVGVPVERIKRMGAEDNFWTSGVTGPCGPCSEIYYDFHPERGYSDVDLGDDTRFI 297
Query: 239 EFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDLIFPIIKKASE 298
EFYNLVFMQYNKKDDGSLEPLKQ NIDTGLGLER+ARILQKVPNNYETDLI+PII+KASE
Sbjct: 298 EFYNLVFMQYNKKDDGSLEPLKQMNIDTGLGLERMARILQKVPNNYETDLIYPIIEKASE 357
Query: 299 LANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLIRRAVRTGRLL 358
LANVSYA ++D +NLK+IGDHLRAIVYL+SDGV PSNIGRGYV RRLIRRAVRTGRLL
Sbjct: 358 LANVSYALADDHAKMNLKVIGDHLRAIVYLISDGVVPSNIGRGYVARRLIRRAVRTGRLL 417
Query: 359 GIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELRFVQTLERGEK 418
GIKGDGRGN EGAFLP+IAEK IELS+ ID DVK+R RILEELKREELRFVQTLERGEK
Sbjct: 418 GIKGDGRGNPEGAFLPTIAEKVIELSSQIDPDVKSRAPRILEELKREELRFVQTLERGEK 477
Query: 419 LLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGVSVDMKGFDIE 478
LLD+MLA+AL + E+G+ P LSG+D FLLYDT+GFPVEIT E AEE GV +DM GF+IE
Sbjct: 478 LLDEMLANALLNSNENGNGPILSGKDVFLLYDTYGFPVEITTEAAEERGVGIDMNGFEIE 537
Query: 479 MENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTLSAKAIVESLLVNGKPVIKVS 538
MENQRRQSQAAHNAVKL+V +SADL E I DTEFLGY+TLS KA++E LLVNG PVI+VS
Sbjct: 538 MENQRRQSQAAHNAVKLAVGNSADLTENISDTEFLGYETLSTKAVIEGLLVNGNPVIQVS 597
Query: 539 KGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVKKSLGSVFVHKGTI 598
+GSDVE+ LNRTPFYAESGGQIGD+GFLYV + NQ+ AVVE+KDV+KSLG++FVHKGTI
Sbjct: 598 EGSDVEIFLNRTPFYAESGGQIGDHGFLYVNEDRNQKNAVVEIKDVQKSLGNIFVHKGTI 657
Query: 599 REGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQAGSLVAFDRLRFD 658
+EGV+EVG+EVEA VD LRQRAK+HHTATHLLQAALKKVIG ETSQAGSLVAFDRLRFD
Sbjct: 658 KEGVVEVGKEVEAAVDANLRQRAKIHHTATHLLQAALKKVIGDETSQAGSLVAFDRLRFD 717
Query: 659 FNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAMFGEKYGEQVKI 716
FNFHRPL + EL EIE LINGWIGDA LLQTKVM L DAKRAGAIAMFGEKYGEQV++
Sbjct: 718 FNFHRPLQEKELVEIEELINGWIGDATLLQTKVMPLADAKRAGAIAMFGEKYGEQVRV 775
>gi|224105089|ref|XP_002313683.1| predicted protein [Populus trichocarpa]
gi|313471500|sp|B9HQZ6.1|SYAP_POPTR RecName: Full=Probable alanine--tRNA ligase, chloroplastic;
AltName: Full=Alanyl-tRNA synthetase; Short=AlaRS
gi|222850091|gb|EEE87638.1| predicted protein [Populus trichocarpa]
Length = 994
Score = 1214 bits (3141), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 580/718 (80%), Positives = 649/718 (90%), Gaps = 5/718 (0%)
Query: 1 MAHYYPSILPCGHFLFKGATGVP-SARSTSASVQPLTEE-VEDKSQDFPSSGDSIRKRFL 58
+A + PSI PCG+F+ GA AR+T ASVQP+TEE VEDK+++ P SGD+IR+RFL
Sbjct: 49 VALFSPSIFPCGYFILGGARERRFGARNTQASVQPVTEELVEDKTKENPVSGDAIRRRFL 108
Query: 59 DFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQRCIRTNDV 118
+FYASR HKVLPSASLVP+DPTVLLTIAGMLQFKPIFLGK PRQVPRA T+Q+CIRTNDV
Sbjct: 109 EFYASRSHKVLPSASLVPDDPTVLLTIAGMLQFKPIFLGKAPRQVPRATTAQKCIRTNDV 168
Query: 119 ENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWISVYEDDDEAF 178
ENVGRT+RHHTFFEMLGNFSFGDYFKKEAI+WAWE ST EFGLPA+RLW+SVYEDDDEAF
Sbjct: 169 ENVGRTTRHHTFFEMLGNFSFGDYFKKEAIKWAWELSTKEFGLPADRLWVSVYEDDDEAF 228
Query: 179 EIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSDVDLGDDTRFI 238
EIW+ EVGVPVE IKRMG +DNFW SGATGPCGPCSE+YYDFHP+RG + DLGDD+RFI
Sbjct: 229 EIWHDEVGVPVERIKRMGEEDNFWTSGATGPCGPCSELYYDFHPERGYKNTDLGDDSRFI 288
Query: 239 EFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDLIFPIIKKASE 298
EFYNLVFMQYNK DDGSLEPLKQKNIDTGLGLER+ARILQKVPNNYETDLI+PII+KA+E
Sbjct: 289 EFYNLVFMQYNKMDDGSLEPLKQKNIDTGLGLERLARILQKVPNNYETDLIYPIIEKAAE 348
Query: 299 LANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLIRRAVRTGRLL 358
LAN+SYA ++DRT +NLKIIGDHLRAIVYL+SDGV PSNIGRGYVVRRLIRRAVRTGRLL
Sbjct: 349 LANISYALADDRTKMNLKIIGDHLRAIVYLISDGVLPSNIGRGYVVRRLIRRAVRTGRLL 408
Query: 359 GIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELRFVQTLERGEK 418
G+KG G +G FLP+IAEK IELS HID DVKAR IL+EL+REELRFVQTLERGEK
Sbjct: 409 GVKGGGE---DGVFLPAIAEKVIELSPHIDPDVKARGHSILDELQREELRFVQTLERGEK 465
Query: 419 LLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGVSVDMKGFDIE 478
LLDQMLA+AL ++S ++P LSG+D FLLYDTFGFPVEIT EVAEE GV +DM GF++E
Sbjct: 466 LLDQMLAEALLNAQKSETLPCLSGKDVFLLYDTFGFPVEITTEVAEEQGVKIDMDGFEVE 525
Query: 479 MENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTLSAKAIVESLLVNGKPVIKVS 538
MENQRRQSQAAHN VKL+V++ DLAE + DTEFLGYDTLSA+A+VESLL+NGK VI+VS
Sbjct: 526 MENQRRQSQAAHNVVKLAVENGGDLAENVHDTEFLGYDTLSARAVVESLLLNGKSVIQVS 585
Query: 539 KGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVKKSLGSVFVHKGTI 598
+GS+VEVLLN+TPFYAESGGQIGD+GFLYVTQ ++QTAVVE+KDV+KSLGSVFVHKGTI
Sbjct: 586 EGSEVEVLLNKTPFYAESGGQIGDHGFLYVTQDQSKQTAVVEIKDVQKSLGSVFVHKGTI 645
Query: 599 REGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQAGSLVAFDRLRFD 658
REGVLEVGREVEA VD KLRQRAKVHHTATHLLQ+ALKKVIGQETSQAGSLVAFDRLRFD
Sbjct: 646 REGVLEVGREVEAAVDAKLRQRAKVHHTATHLLQSALKKVIGQETSQAGSLVAFDRLRFD 705
Query: 659 FNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAMFGEKYGEQVKI 716
FNFHRPL D+ELEEIE LINGWIGD LLQTKVM+L DAK AGAIAMFGEKYGEQV++
Sbjct: 706 FNFHRPLHDSELEEIENLINGWIGDGTLLQTKVMSLTDAKEAGAIAMFGEKYGEQVRV 763
>gi|449444378|ref|XP_004139952.1| PREDICTED: probable alanine--tRNA ligase, chloroplastic-like
[Cucumis sativus]
Length = 956
Score = 1160 bits (3000), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 560/714 (78%), Positives = 636/714 (89%), Gaps = 4/714 (0%)
Query: 5 YPSILPCG-HFLFKGATGVPSARSTSASVQPLTEE-VEDKSQDFPSSGDSIRKRFLDFYA 62
+PS C +FL K A G + T SV+P+ EE VEDKS+D P SGDSIR+RFL FYA
Sbjct: 14 FPSTRHCHRYFLLKEARG--TQLKTQTSVKPVNEELVEDKSKDLPVSGDSIRQRFLQFYA 71
Query: 63 SRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQRCIRTNDVENVG 122
SRGHKVLPSASLVPEDPTVLLTIAGMLQFK +FLGKVPR VP AATSQRC+RTNDVENVG
Sbjct: 72 SRGHKVLPSASLVPEDPTVLLTIAGMLQFKSVFLGKVPRLVPCAATSQRCLRTNDVENVG 131
Query: 123 RTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWISVYEDDDEAFEIWN 182
RT+RHHTFFEMLGNFSFGDYFKKEAI+WAWE +TVEFGLPANRLWIS+YE+DDEAF IW+
Sbjct: 132 RTARHHTFFEMLGNFSFGDYFKKEAIKWAWELTTVEFGLPANRLWISIYEEDDEAFAIWH 191
Query: 183 KEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSDVDLGDDTRFIEFYN 242
EVGVP++ IKRMG DDNFW SG TGPCGPCSEIYYDF P++G SDVDLGDDTRF+EFYN
Sbjct: 192 DEVGVPIDRIKRMGEDDNFWTSGITGPCGPCSEIYYDFQPEKGYSDVDLGDDTRFMEFYN 251
Query: 243 LVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDLIFPIIKKASELANV 302
LVFMQYNKKDDGSLEPLKQKNIDTGLGLER+ARILQKVPNNYETDLI+PII+KASELANV
Sbjct: 252 LVFMQYNKKDDGSLEPLKQKNIDTGLGLERMARILQKVPNNYETDLIYPIIQKASELANV 311
Query: 303 SYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLIRRAVRTGRLLGIKG 362
+Y +++R+ NLKIIGDH+RA+VYL+SDGV PSNIGRGY+VRRLIRR VRTGRLLGIKG
Sbjct: 312 TYDTADNRSKTNLKIIGDHMRAVVYLISDGVVPSNIGRGYIVRRLIRRVVRTGRLLGIKG 371
Query: 363 DGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELRFVQTLERGEKLLDQ 422
DGRGN++GAF P IAEK I LS HID DVK R RILEELKREELRFVQTLERGEKLL++
Sbjct: 372 DGRGNIDGAFTPVIAEKVIALSNHIDEDVKGRAGRILEELKREELRFVQTLERGEKLLEE 431
Query: 423 MLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGVSVDMKGFDIEMENQ 482
MLADAL+ + G +P L+G+DAFLLYDT+GFPVEI+ EVA+E GV VDM+GFDIEM+NQ
Sbjct: 432 MLADALASANDGGRIPCLAGKDAFLLYDTYGFPVEISTEVAQERGVVVDMEGFDIEMDNQ 491
Query: 483 RRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSD 542
RRQSQAAHN VKL V + AD+ E I DTEFLGYDTLSAKAIVESL+VNG PV++VS+G+D
Sbjct: 492 RRQSQAAHNVVKLEVGEGADIMENISDTEFLGYDTLSAKAIVESLIVNGNPVLQVSEGND 551
Query: 543 VEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGV 602
VEVLLNRTPFYAESGGQIGD+GF+Y+++G N Q VVEVKDV+KS GS+FVHKG I++G+
Sbjct: 552 VEVLLNRTPFYAESGGQIGDHGFIYISEGENSQNVVVEVKDVQKSAGSIFVHKGIIKQGI 611
Query: 603 LEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQAGSLVAFDRLRFDFNFH 662
LEVGREVEA VD +LRQ AKVHHTATHLLQ+ALK++IGQETSQAGSLVAFDRLRFDFN+H
Sbjct: 612 LEVGREVEAAVDAELRQGAKVHHTATHLLQSALKRIIGQETSQAGSLVAFDRLRFDFNYH 671
Query: 663 RPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAMFGEKYGEQVKI 716
RPL+D E+ +IE LINGWIGDA LLQTKVMAL +AK+AGAIAMFGEKYGE+V++
Sbjct: 672 RPLVDAEIVKIEELINGWIGDAVLLQTKVMALTEAKKAGAIAMFGEKYGEEVRV 725
>gi|449518200|ref|XP_004166131.1| PREDICTED: probable alanine--tRNA ligase, chloroplastic-like
[Cucumis sativus]
Length = 956
Score = 1159 bits (2997), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 559/714 (78%), Positives = 635/714 (88%), Gaps = 4/714 (0%)
Query: 5 YPSILPCG-HFLFKGATGVPSARSTSASVQPLTEE-VEDKSQDFPSSGDSIRKRFLDFYA 62
+PS C +FL K A G + T SV+P+ EE VEDKS+D P SGDSIR+RFL FYA
Sbjct: 14 FPSTRHCHRYFLLKEARG--TQLKTQTSVKPVNEELVEDKSKDLPVSGDSIRQRFLQFYA 71
Query: 63 SRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQRCIRTNDVENVG 122
SRGHKVLPSASLVPEDPTVLLTIAGMLQFK +FLGKVPR VP A TSQRC+RTNDVENVG
Sbjct: 72 SRGHKVLPSASLVPEDPTVLLTIAGMLQFKSVFLGKVPRLVPCATTSQRCLRTNDVENVG 131
Query: 123 RTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWISVYEDDDEAFEIWN 182
RT+RHHTFFEMLGNFSFGDYFKKEAI+WAWE +TVEFGLPANRLWIS+YE+DDEAF IW+
Sbjct: 132 RTARHHTFFEMLGNFSFGDYFKKEAIKWAWELTTVEFGLPANRLWISIYEEDDEAFAIWH 191
Query: 183 KEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSDVDLGDDTRFIEFYN 242
EVGVP++ IKRMG DDNFW SG TGPCGPCSEIYYDF P++G SDVDLGDDTRF+EFYN
Sbjct: 192 DEVGVPIDRIKRMGEDDNFWTSGITGPCGPCSEIYYDFQPEKGYSDVDLGDDTRFMEFYN 251
Query: 243 LVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDLIFPIIKKASELANV 302
LVFMQYNKKDDGSLEPLKQKNIDTGLGLER+ARILQKVPNNYETDLI+PII+KASELANV
Sbjct: 252 LVFMQYNKKDDGSLEPLKQKNIDTGLGLERMARILQKVPNNYETDLIYPIIQKASELANV 311
Query: 303 SYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLIRRAVRTGRLLGIKG 362
+Y +++R+ NLKIIGDH+RA+VYL+SDGV PSNIGRGY+VRRLIRR VRTGRLLGIKG
Sbjct: 312 TYDTADNRSKTNLKIIGDHMRAVVYLISDGVVPSNIGRGYIVRRLIRRVVRTGRLLGIKG 371
Query: 363 DGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELRFVQTLERGEKLLDQ 422
DGRGN++GAF P IAEK I LS HID DVK R RILEELKREELRFVQTLERGEKLL++
Sbjct: 372 DGRGNIDGAFTPVIAEKVIALSNHIDEDVKGRAGRILEELKREELRFVQTLERGEKLLEE 431
Query: 423 MLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGVSVDMKGFDIEMENQ 482
MLADAL+ + G +P L+G+DAFLLYDT+GFPVEI+ EVA+E GV VDM+GFDIEM+NQ
Sbjct: 432 MLADALASANDGGRIPCLAGKDAFLLYDTYGFPVEISTEVAQERGVVVDMEGFDIEMDNQ 491
Query: 483 RRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSD 542
RRQSQAAHN VKL V + AD+ E I DTEFLGYDTLSAKAIVESL+VNG PV++VS+G+D
Sbjct: 492 RRQSQAAHNVVKLEVGEGADIMENISDTEFLGYDTLSAKAIVESLIVNGNPVLQVSEGND 551
Query: 543 VEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGV 602
VEVLLNRTPFYAESGGQIGD+GF+Y+++G N Q VVEVKDV+KS GS+FVHKG I++G+
Sbjct: 552 VEVLLNRTPFYAESGGQIGDHGFIYISEGENSQNVVVEVKDVQKSAGSIFVHKGIIKQGI 611
Query: 603 LEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQAGSLVAFDRLRFDFNFH 662
LEVGREVEA VD +LRQ AKVHHTATHLLQ+ALK++IGQETSQAGSLVAFDRLRFDFN+H
Sbjct: 612 LEVGREVEAAVDAELRQGAKVHHTATHLLQSALKRIIGQETSQAGSLVAFDRLRFDFNYH 671
Query: 663 RPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAMFGEKYGEQVKI 716
RPL+D E+ +IE LINGWIGDA LLQTKVMAL +AK+AGAIAMFGEKYGE+V++
Sbjct: 672 RPLVDAEIVKIEELINGWIGDAVLLQTKVMALTEAKKAGAIAMFGEKYGEEVRV 725
>gi|356516209|ref|XP_003526788.1| PREDICTED: probable alanyl-tRNA synthetase, chloroplastic-like
[Glycine max]
Length = 980
Score = 1111 bits (2874), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 534/683 (78%), Positives = 609/683 (89%)
Query: 34 PLTEEVEDKSQDFPSSGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKP 93
PL E+V D SGDSIR+RFL+FYASRGHKVLPSASLVP+DPTVLLTIAGMLQFKP
Sbjct: 67 PLPEQVTVTDPDNSVSGDSIRQRFLNFYASRGHKVLPSASLVPDDPTVLLTIAGMLQFKP 126
Query: 94 IFLGKVPRQVPRAATSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWE 153
IFLGK+PRQVP AAT+QRCIRTND+ NVG T+RH TFFEMLGNFSFG YFKK+AI WAWE
Sbjct: 127 IFLGKIPRQVPCAATAQRCIRTNDIHNVGLTARHQTFFEMLGNFSFGHYFKKQAILWAWE 186
Query: 154 FSTVEFGLPANRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPC 213
ST EFGLP +RLWISVYEDDDEAF++W+ EVGVPVE IKR+G +DNFW SG TGPCGPC
Sbjct: 187 LSTAEFGLPPDRLWISVYEDDDEAFQLWSHEVGVPVERIKRLGEEDNFWTSGVTGPCGPC 246
Query: 214 SEIYYDFHPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERI 273
SEIYYDF+P+RG D DL DDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLER+
Sbjct: 247 SEIYYDFYPERGYVDADLNDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERM 306
Query: 274 ARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGV 333
ARILQKVPNNYETDLIFPII+KAS+LANVSY ++D+T NLKIIGDH+RAIV+L+SDGV
Sbjct: 307 ARILQKVPNNYETDLIFPIIEKASKLANVSYGIADDQTKRNLKIIGDHMRAIVFLISDGV 366
Query: 334 FPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKA 393
PSN+GRGYVVRRLIRR VRTGRLLGI GDGRG+LEGAFLP IAEK +ELSTHID+DVK
Sbjct: 367 VPSNVGRGYVVRRLIRRVVRTGRLLGINGDGRGDLEGAFLPMIAEKVVELSTHIDADVKN 426
Query: 394 REQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFG 453
+ RI EELKREELRFVQTLERGEKLL++ L+DALS +G+VP L+G+D FLLYDT+G
Sbjct: 427 KAPRIFEELKREELRFVQTLERGEKLLEEKLSDALSSAERNGTVPCLAGEDVFLLYDTYG 486
Query: 454 FPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFL 513
+P+EITKEVAEE GVS+DM GFDIEME QRRQSQAAHN VKL++++ ++AE +PDTEF+
Sbjct: 487 YPMEITKEVAEERGVSIDMDGFDIEMEKQRRQSQAAHNTVKLAIENGENIAENVPDTEFI 546
Query: 514 GYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTN 573
GYD L KA++ESL VNG PV +VS+GS+VEVLLN+TPFYAESGGQIGD+GFLY+++G N
Sbjct: 547 GYDRLHCKAMIESLTVNGNPVPQVSEGSNVEVLLNKTPFYAESGGQIGDHGFLYISEGEN 606
Query: 574 QQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQA 633
Q AVVE+ DV+KS G++FVHKGT+++GV+EVG+EV+A VD KLRQRAKVHHTATHLLQA
Sbjct: 607 QLKAVVEILDVQKSFGNIFVHKGTVQKGVVEVGKEVKAAVDVKLRQRAKVHHTATHLLQA 666
Query: 634 ALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMA 693
ALKKVIGQETSQAGSLVAFDRLRFDFNFHRPL D+EL EIE+LINGWI DA LLQTKVM
Sbjct: 667 ALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLRDSELAEIEKLINGWIEDATLLQTKVMP 726
Query: 694 LDDAKRAGAIAMFGEKYGEQVKI 716
L DAK AGAIAMFGEKYGE+V++
Sbjct: 727 LVDAKSAGAIAMFGEKYGEEVRV 749
>gi|356509509|ref|XP_003523490.1| PREDICTED: probable alanyl-tRNA synthetase, chloroplastic-like
[Glycine max]
Length = 957
Score = 1102 bits (2851), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 530/684 (77%), Positives = 605/684 (88%), Gaps = 1/684 (0%)
Query: 34 PLTEEVEDKSQDFPSSGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKP 93
PL E+V + +GDSIR+RFL+FYASRGHKVLPSASLVP+DPTVLLTIAGMLQFKP
Sbjct: 43 PLPEQVTVPDTENSVTGDSIRQRFLNFYASRGHKVLPSASLVPDDPTVLLTIAGMLQFKP 102
Query: 94 IFLGKVPRQVPRAATSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWE 153
IFLGKVPRQVP AAT+QRCIRTND+ NVG T+RH TFFEMLGNFSFG YFKK+AI WAWE
Sbjct: 103 IFLGKVPRQVPCAATAQRCIRTNDIHNVGLTARHQTFFEMLGNFSFGHYFKKQAILWAWE 162
Query: 154 FSTVEFGLPANRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPC 213
ST EFGLP +RLWISVYEDDDEAF++W+ EVGVPVE IKR+G +DNFW SG TGPCGPC
Sbjct: 163 LSTAEFGLPPDRLWISVYEDDDEAFQLWSDEVGVPVERIKRLGEEDNFWTSGVTGPCGPC 222
Query: 214 SEIYYDFHPDRGCSDV-DLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLER 272
SEIYYDFHP+RG D DL DDTRFIEFYNLVFMQYNKKDD SLEPLKQKNIDTGLGLER
Sbjct: 223 SEIYYDFHPERGYVDAQDLNDDTRFIEFYNLVFMQYNKKDDSSLEPLKQKNIDTGLGLER 282
Query: 273 IARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDG 332
+ARILQKVPNNYETDLIFPII+KAS+LANVSY ++D+T NLKIIGDH+RAIV+L+SDG
Sbjct: 283 MARILQKVPNNYETDLIFPIIEKASKLANVSYGIADDQTKRNLKIIGDHMRAIVFLISDG 342
Query: 333 VFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVK 392
V PSN+GRGYVVRRLIRR VRTGRLLGIKGDGRG+LEGAFLP IAEK +ELSTHID+DV
Sbjct: 343 VVPSNVGRGYVVRRLIRRVVRTGRLLGIKGDGRGDLEGAFLPIIAEKVVELSTHIDADVM 402
Query: 393 AREQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTF 452
+ RI EELKREELRFVQTLERGEKLL++ L+DALS +G+VP L+G+D FLLYDT+
Sbjct: 403 NKASRIFEELKREELRFVQTLERGEKLLEEKLSDALSSAERNGTVPCLAGEDVFLLYDTY 462
Query: 453 GFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEF 512
G+P+EITKEVAEE GVS+DM GFDIEME QRRQSQAAHN VKL +++ ++AE +PDTEF
Sbjct: 463 GYPMEITKEVAEERGVSIDMDGFDIEMEKQRRQSQAAHNTVKLDIENGENIAENVPDTEF 522
Query: 513 LGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGT 572
+GYD L KA++ESL+VNG P +VS+GS+VEVLLN+TPFYAESGGQIGD+G+LY+++G
Sbjct: 523 IGYDNLHCKAMIESLMVNGNPAPQVSEGSNVEVLLNKTPFYAESGGQIGDHGYLYISKGE 582
Query: 573 NQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQ 632
NQ AVVE+ DV+KS G++FVHKGT+++GV+EVG+EVEA VD KLRQRAKVHHTATHLLQ
Sbjct: 583 NQPKAVVEILDVQKSFGNIFVHKGTVQKGVVEVGKEVEAAVDVKLRQRAKVHHTATHLLQ 642
Query: 633 AALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVM 692
AALKKVIGQETSQAGSLVAFDRLRFDFNFHRPL D+EL EIE LINGWI DA LQTKVM
Sbjct: 643 AALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLRDSELAEIEVLINGWIEDATQLQTKVM 702
Query: 693 ALDDAKRAGAIAMFGEKYGEQVKI 716
L +AK AGAIAMFGEKYGE+V++
Sbjct: 703 PLVEAKSAGAIAMFGEKYGEEVRV 726
>gi|10177227|dbj|BAB10601.1| alanyl-tRNA synthetase [Arabidopsis thaliana]
Length = 954
Score = 1098 bits (2841), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 522/678 (76%), Positives = 594/678 (87%), Gaps = 5/678 (0%)
Query: 40 EDKSQDFPS---SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFL 96
ED +D+ S SGDSIR+RFL+F+ASRGHKVLPS+SLVPEDPTVLLTIAGMLQFKPIFL
Sbjct: 43 EDAKEDYQSKDVSGDSIRRRFLEFFASRGHKVLPSSSLVPEDPTVLLTIAGMLQFKPIFL 102
Query: 97 GKVPRQVPRAATSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFST 156
GKVPR+VP A T+QRCIRTND+ENVG+T+RHHTFFEMLGNFSFGDYFKKEAI+WAWE ST
Sbjct: 103 GKVPREVPCATTAQRCIRTNDLENVGKTARHHTFFEMLGNFSFGDYFKKEAIKWAWELST 162
Query: 157 VEFGLPANRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEI 216
+EFGLPANR+W+S+YEDDDEAFEIW EVGV VE IKRMG DNFW SG TGPCGPCSE+
Sbjct: 163 IEFGLPANRVWVSIYEDDDEAFEIWKNEVGVSVERIKRMGEADNFWTSGPTGPCGPCSEL 222
Query: 217 YYDFHPDRGC-SDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
YYDF+P+RG DVDLGDDTRFIEFYNLVFMQYNK +DG LEPLKQKNIDTGLGLERIA+
Sbjct: 223 YYDFYPERGYDEDVDLGDDTRFIEFYNLVFMQYNKTEDGLLEPLKQKNIDTGLGLERIAQ 282
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
ILQKVPNNYETDLI+PII K SELAN+SY +ND+ +LK+I DH+RA+VYL+SDGV P
Sbjct: 283 ILQKVPNNYETDLIYPIIAKISELANISYDSANDKAKTSLKVIADHMRAVVYLISDGVSP 342
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SNIGRGYVVRRLIRRAVR G+ LGI GD GNL+GAFLP++AEK IELST+IDSDVK +
Sbjct: 343 SNIGRGYVVRRLIRRAVRKGKSLGINGDMNGNLKGAFLPAVAEKVIELSTYIDSDVKLKA 402
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
RI+EE+++EEL F +TLERGEKLLDQ L DALS ++ P L G+DAFLLYDTFGFP
Sbjct: 403 SRIIEEIRQEELHFKKTLERGEKLLDQKLNDALSIADKTKDTPYLDGKDAFLLYDTFGFP 462
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGY 515
VEIT EVAEE GVS+DM GF++EMENQRRQSQAAHN VKL+V+D AD+ + I DTEFLGY
Sbjct: 463 VEITAEVAEERGVSIDMNGFEVEMENQRRQSQAAHNVVKLTVEDDADMTKNIADTEFLGY 522
Query: 516 DTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
D+LSA+A+V+SLLVNGKPVI+VS+GS+VEVLL+RTPFYAESGGQI D+GFLYV+ NQ+
Sbjct: 523 DSLSARAVVKSLLVNGKPVIRVSEGSEVEVLLDRTPFYAESGGQIADHGFLYVSSDGNQE 582
Query: 576 TAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAAL 635
AVVEV DV+KSL +FVHKGT++ G LEVG+EVEA VD LRQRAKVHHTATHLLQ+AL
Sbjct: 583 KAVVEVSDVQKSL-KIFVHKGTVKSGALEVGKEVEAAVDADLRQRAKVHHTATHLLQSAL 641
Query: 636 KKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALD 695
KKV+GQETSQAGSLVAFDRLRFDFNF+R L D ELEEIE LIN WIGDA L+TKV+ L
Sbjct: 642 KKVVGQETSQAGSLVAFDRLRFDFNFNRSLHDNELEEIECLINRWIGDATRLETKVLPLA 701
Query: 696 DAKRAGAIAMFGEKYGEQ 713
DAKRAGAIAMFGEKY E
Sbjct: 702 DAKRAGAIAMFGEKYDEN 719
>gi|30688660|ref|NP_680210.2| alanyl-tRNA synthetase [Arabidopsis thaliana]
gi|322510075|sp|Q9FFC7.2|SYAP_ARATH RecName: Full=Probable alanine--tRNA ligase, chloroplastic;
AltName: Full=Alanyl-tRNA synthetase; Short=AlaRS;
AltName: Full=Protein EMBRYO DEFECTIVE 1030; AltName:
Full=Protein EMBRYO DEFECTIVE 263; AltName: Full=Protein
EMBRYO DEFECTIVE 86; Flags: Precursor
gi|332005698|gb|AED93081.1| alanyl-tRNA synthetase [Arabidopsis thaliana]
Length = 978
Score = 1098 bits (2840), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 522/678 (76%), Positives = 594/678 (87%), Gaps = 5/678 (0%)
Query: 40 EDKSQDFPS---SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFL 96
ED +D+ S SGDSIR+RFL+F+ASRGHKVLPS+SLVPEDPTVLLTIAGMLQFKPIFL
Sbjct: 67 EDAKEDYQSKDVSGDSIRRRFLEFFASRGHKVLPSSSLVPEDPTVLLTIAGMLQFKPIFL 126
Query: 97 GKVPRQVPRAATSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFST 156
GKVPR+VP A T+QRCIRTND+ENVG+T+RHHTFFEMLGNFSFGDYFKKEAI+WAWE ST
Sbjct: 127 GKVPREVPCATTAQRCIRTNDLENVGKTARHHTFFEMLGNFSFGDYFKKEAIKWAWELST 186
Query: 157 VEFGLPANRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEI 216
+EFGLPANR+W+S+YEDDDEAFEIW EVGV VE IKRMG DNFW SG TGPCGPCSE+
Sbjct: 187 IEFGLPANRVWVSIYEDDDEAFEIWKNEVGVSVERIKRMGEADNFWTSGPTGPCGPCSEL 246
Query: 217 YYDFHPDRGC-SDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
YYDF+P+RG DVDLGDDTRFIEFYNLVFMQYNK +DG LEPLKQKNIDTGLGLERIA+
Sbjct: 247 YYDFYPERGYDEDVDLGDDTRFIEFYNLVFMQYNKTEDGLLEPLKQKNIDTGLGLERIAQ 306
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
ILQKVPNNYETDLI+PII K SELAN+SY +ND+ +LK+I DH+RA+VYL+SDGV P
Sbjct: 307 ILQKVPNNYETDLIYPIIAKISELANISYDSANDKAKTSLKVIADHMRAVVYLISDGVSP 366
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SNIGRGYVVRRLIRRAVR G+ LGI GD GNL+GAFLP++AEK IELST+IDSDVK +
Sbjct: 367 SNIGRGYVVRRLIRRAVRKGKSLGINGDMNGNLKGAFLPAVAEKVIELSTYIDSDVKLKA 426
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
RI+EE+++EEL F +TLERGEKLLDQ L DALS ++ P L G+DAFLLYDTFGFP
Sbjct: 427 SRIIEEIRQEELHFKKTLERGEKLLDQKLNDALSIADKTKDTPYLDGKDAFLLYDTFGFP 486
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGY 515
VEIT EVAEE GVS+DM GF++EMENQRRQSQAAHN VKL+V+D AD+ + I DTEFLGY
Sbjct: 487 VEITAEVAEERGVSIDMNGFEVEMENQRRQSQAAHNVVKLTVEDDADMTKNIADTEFLGY 546
Query: 516 DTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
D+LSA+A+V+SLLVNGKPVI+VS+GS+VEVLL+RTPFYAESGGQI D+GFLYV+ NQ+
Sbjct: 547 DSLSARAVVKSLLVNGKPVIRVSEGSEVEVLLDRTPFYAESGGQIADHGFLYVSSDGNQE 606
Query: 576 TAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAAL 635
AVVEV DV+KSL +FVHKGT++ G LEVG+EVEA VD LRQRAKVHHTATHLLQ+AL
Sbjct: 607 KAVVEVSDVQKSL-KIFVHKGTVKSGALEVGKEVEAAVDADLRQRAKVHHTATHLLQSAL 665
Query: 636 KKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALD 695
KKV+GQETSQAGSLVAFDRLRFDFNF+R L D ELEEIE LIN WIGDA L+TKV+ L
Sbjct: 666 KKVVGQETSQAGSLVAFDRLRFDFNFNRSLHDNELEEIECLINRWIGDATRLETKVLPLA 725
Query: 696 DAKRAGAIAMFGEKYGEQ 713
DAKRAGAIAMFGEKY E
Sbjct: 726 DAKRAGAIAMFGEKYDEN 743
>gi|357467609|ref|XP_003604089.1| Alanyl-tRNA synthetase [Medicago truncatula]
gi|355493137|gb|AES74340.1| Alanyl-tRNA synthetase [Medicago truncatula]
Length = 1005
Score = 1088 bits (2815), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 525/693 (75%), Positives = 598/693 (86%), Gaps = 25/693 (3%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
SGDSIR+RFL FYASRGHKVLPSASLVP+DPTVLLTIAGMLQFKPIFLGK+PRQVPRA T
Sbjct: 82 SGDSIRERFLSFYASRGHKVLPSASLVPDDPTVLLTIAGMLQFKPIFLGKLPRQVPRATT 141
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
SQRCIRTND+ NVG TSRHHTFFEMLGNFSFGDYFKK+AIQWAW+ ST+EFGLP RLWI
Sbjct: 142 SQRCIRTNDINNVGHTSRHHTFFEMLGNFSFGDYFKKQAIQWAWDLSTIEFGLPPERLWI 201
Query: 169 SVYEDDDEAFEIWNKEV-------------------------GVPVEHIKRMGADDNFWN 203
SVY+DD E F++W+++V GVPVE IKR+G +DNFW
Sbjct: 202 SVYQDDHETFQLWSQQVITSHFLLITPLLFRSCHHIFISLQVGVPVERIKRLGEEDNFWT 261
Query: 204 SGATGPCGPCSEIYYDFHPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKN 263
SG TGPCGPCSEIYYDFHP+RG +D DLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKN
Sbjct: 262 SGVTGPCGPCSEIYYDFHPERGYADADLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKN 321
Query: 264 IDTGLGLERIARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLR 323
IDTGLGLER+ARILQK PNNYETDLI PII+KASELAN+SY S+D+T LKI+GDH+R
Sbjct: 322 IDTGLGLERMARILQKAPNNYETDLILPIIEKASELANISYGISDDQTKRYLKIVGDHMR 381
Query: 324 AIVYLLSDGVFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIEL 383
AIV+L+SDGV PSN+GRGYVVRRLIRR VRTGRLLGIKGDGRG+ EGAFLP IA+K +EL
Sbjct: 382 AIVFLISDGVVPSNVGRGYVVRRLIRRVVRTGRLLGIKGDGRGDPEGAFLPIIAQKVLEL 441
Query: 384 STHIDSDVKAREQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQ 443
STHID+DVK R RILEELKREELRFVQTLERGEKLL++ L DA++ SG+VP L+G+
Sbjct: 442 STHIDADVKNRAPRILEELKREELRFVQTLERGEKLLEEKLVDAITSAERSGTVPCLAGE 501
Query: 444 DAFLLYDTFGFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADL 503
D F+LYDT+GFP+EITKEVAEE GVS+DM GFDIEME QRRQSQAAHN VKL++ ++
Sbjct: 502 DVFILYDTYGFPMEITKEVAEERGVSIDMNGFDIEMEKQRRQSQAAHNTVKLAIGSGTNI 561
Query: 504 AEKIPDTEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDY 563
A+ +PDTEF+GY++L KAIV SL+VNG P ++V +GS+VE+LLN+TPFYAESGGQIGD+
Sbjct: 562 ADNVPDTEFIGYESLYCKAIVASLVVNGDPAVQVREGSNVEILLNKTPFYAESGGQIGDH 621
Query: 564 GFLYVTQGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKV 623
GFLY+ +G NQ A+VE+ DV+KS G++FVHKGT+++GVLEVG+ VEA VD KLRQRAKV
Sbjct: 622 GFLYIAEGENQPKAIVEIIDVQKSFGNIFVHKGTVQKGVLEVGKLVEATVDVKLRQRAKV 681
Query: 624 HHTATHLLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGD 683
HHTATHLLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLD EL EIE LINGWI D
Sbjct: 682 HHTATHLLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDGELAEIELLINGWIED 741
Query: 684 ANLLQTKVMALDDAKRAGAIAMFGEKYGEQVKI 716
A LLQTKVM L DAKR GAIAMFGEKYGE+V++
Sbjct: 742 AILLQTKVMPLADAKREGAIAMFGEKYGEEVRV 774
>gi|297812419|ref|XP_002874093.1| aminoacyl-tRNA synthetase family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297319930|gb|EFH50352.1| aminoacyl-tRNA synthetase family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 978
Score = 1087 bits (2812), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 518/690 (75%), Positives = 598/690 (86%), Gaps = 2/690 (0%)
Query: 25 ARSTSASVQPLTEEVEDKSQDFPSSGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLT 84
A+S+S S+QP++E+ ++ Q SGDSIR+RFL+F+ASRGHKVLPSASLVPEDPTVLLT
Sbjct: 55 AKSSSVSLQPVSEDAKEDYQSKDVSGDSIRRRFLEFFASRGHKVLPSASLVPEDPTVLLT 114
Query: 85 IAGMLQFKPIFLGKVPRQVPRAATSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFK 144
IAGMLQFKPIFLGKVPR+VP A T+QRCIRTND+ENVG+T+RHHTFFEMLGNFSFGDYFK
Sbjct: 115 IAGMLQFKPIFLGKVPREVPCATTAQRCIRTNDLENVGKTARHHTFFEMLGNFSFGDYFK 174
Query: 145 KEAIQWAWEFSTVEFGLPANRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNS 204
KEAI+WAWE ST+EFGLPANR+W+S+YEDDDEAFEIW EVGVPVE IKRMG DNFW S
Sbjct: 175 KEAIRWAWELSTIEFGLPANRVWVSIYEDDDEAFEIWKNEVGVPVERIKRMGEADNFWTS 234
Query: 205 GATGPCGPCSEIYYDFHPDRGCSDVDLGDD-TRFIEFYNLVFMQYNKKDDGSLEPLKQKN 263
G TGPCGPCSE+YYDF+P+RG D D TRFIEFYNLVFMQYNK +DG LEPLKQKN
Sbjct: 235 GPTGPCGPCSELYYDFYPERGSDDDVDLGDDTRFIEFYNLVFMQYNKTEDGLLEPLKQKN 294
Query: 264 IDTGLGLERIARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLR 323
IDTGLGLERIA+ILQKVPNNYETDLI+PII K SELAN+SY +N++ +LK+I DH+R
Sbjct: 295 IDTGLGLERIAQILQKVPNNYETDLIYPIIAKISELANISYDSANEKAKTSLKVIADHIR 354
Query: 324 AIVYLLSDGVFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIEL 383
A+VYL+SDGV PSNIGRGYVVRRLIRRAVR G+ LGI GNL+GAFLP++AEK IEL
Sbjct: 355 AVVYLISDGVSPSNIGRGYVVRRLIRRAVRKGKSLGINEYRNGNLKGAFLPAVAEKVIEL 414
Query: 384 STHIDSDVKAREQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQ 443
ST+IDSDVK + RI+EE+++EEL F +TLERGEKLLDQ L DALS ++ + P L G+
Sbjct: 415 STYIDSDVKLKAPRIIEEIRQEELHFKKTLERGEKLLDQKLNDALSIADKTKNTPYLDGK 474
Query: 444 DAFLLYDTFGFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADL 503
DAFLLYDT+GFPVEIT EVAEE GVS+DMKGF++EMENQRRQSQAAHN VKL+V+D AD+
Sbjct: 475 DAFLLYDTYGFPVEITAEVAEERGVSIDMKGFEVEMENQRRQSQAAHNVVKLTVEDDADI 534
Query: 504 AEKIPDTEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDY 563
+ I DTEFLGYD+LSA+A+V+SLLV+GKPVIKVS+GS VE+LL+RTPFYAESGGQI D+
Sbjct: 535 TKNIADTEFLGYDSLSARAVVKSLLVDGKPVIKVSEGSKVEILLDRTPFYAESGGQIADH 594
Query: 564 GFLYVTQGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKV 623
GFLYV NQ+ AVVEV DV+KSL +FVHKGT++ G LEVG+EVEA VD LRQRAKV
Sbjct: 595 GFLYVNSDGNQENAVVEVSDVQKSL-KIFVHKGTVKSGALEVGKEVEAAVDADLRQRAKV 653
Query: 624 HHTATHLLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGD 683
HHTATHLLQ+ALKKV+GQETSQAGSLVAFDRLRFDFN +R L D EL+EIERLIN WIGD
Sbjct: 654 HHTATHLLQSALKKVVGQETSQAGSLVAFDRLRFDFNINRSLHDNELKEIERLINRWIGD 713
Query: 684 ANLLQTKVMALDDAKRAGAIAMFGEKYGEQ 713
A L+TKV+ L DAKRAGAIAMFGEKY E
Sbjct: 714 ATRLETKVLPLADAKRAGAIAMFGEKYDEN 743
>gi|242092594|ref|XP_002436787.1| hypothetical protein SORBIDRAFT_10g008780 [Sorghum bicolor]
gi|313471753|sp|C5Z7K4.1|SYAP_SORBI RecName: Full=Probable alanine--tRNA ligase, chloroplastic;
AltName: Full=Alanyl-tRNA synthetase; Short=AlaRS;
Flags: Precursor
gi|241915010|gb|EER88154.1| hypothetical protein SORBIDRAFT_10g008780 [Sorghum bicolor]
Length = 961
Score = 1055 bits (2729), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/690 (73%), Positives = 595/690 (86%), Gaps = 2/690 (0%)
Query: 28 TSASVQPLTEEVEDKSQDFPSSGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAG 87
T ASV+P T+E+ SGD+IR+RFL+FYA+RGHK+LPS+SLVP+DPTVLLTIAG
Sbjct: 44 TRASVEPATQELGTAGAG-EWSGDAIRRRFLEFYAARGHKILPSSSLVPDDPTVLLTIAG 102
Query: 88 MLQFKPIFLGKVPRQVPRAATSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEA 147
MLQFKPIFLGK PR+VP A TSQ+CIRTND+ENVGRT+RH TFFEMLGNFSFGDYFKKEA
Sbjct: 103 MLQFKPIFLGKEPRRVPCATTSQKCIRTNDIENVGRTARHQTFFEMLGNFSFGDYFKKEA 162
Query: 148 IQWAWEFSTVEFGLPANRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGAT 207
WAWE +T E+GLPA RLWISV+EDD+EAF+IW+ EVGVP E IKRMGA+DNFW SGAT
Sbjct: 163 TAWAWELATKEYGLPAERLWISVFEDDNEAFDIWHNEVGVPKERIKRMGAEDNFWTSGAT 222
Query: 208 GPCGPCSEIYYDFHPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTG 267
GPCGPCSEIYYDF+P+RG SD DLGDD+RFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTG
Sbjct: 223 GPCGPCSEIYYDFYPERGSSDADLGDDSRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTG 282
Query: 268 LGLERIARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVY 327
+GLER+ARILQKVPNNYETDLIFPII+KA+ +A VSYA+++D T NLKIIGDH+RA+VY
Sbjct: 283 MGLERMARILQKVPNNYETDLIFPIIEKAASMAMVSYAKTDDATKTNLKIIGDHMRAVVY 342
Query: 328 LLSDGVFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHI 387
L+SDGV PSNIGRGYVVRRLIRR VR GRL+GI+GDG GN EGAFLPS+AE I LST I
Sbjct: 343 LVSDGVIPSNIGRGYVVRRLIRRVVRMGRLIGIRGDGHGNSEGAFLPSLAEVVISLSTEI 402
Query: 388 DSDVKAREQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFL 447
D DV++R + IL EL+REELRFVQTLERGEKLLD++L A+ +G P LSG+D FL
Sbjct: 403 DPDVESRRRSILGELQREELRFVQTLERGEKLLDELLDGAVLSAGNNGDKPSLSGKDLFL 462
Query: 448 LYDTFGFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKI 507
LYDT+GFPVEIT E+A E GV+VD++GFDIEMENQR+QSQAAHN VKLSV + ++ + I
Sbjct: 463 LYDTYGFPVEITAEIASERGVTVDIEGFDIEMENQRKQSQAAHNVVKLSVGNETEIIKSI 522
Query: 508 PDTEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLY 567
PDT FLGYD+LSA A+V LLVNG PV +VS+GS+VE+LL+RTPFYAESGGQ+GD GFLY
Sbjct: 523 PDTVFLGYDSLSASAVVRGLLVNGNPVNEVSEGSEVEILLDRTPFYAESGGQVGDNGFLY 582
Query: 568 VTQGTNQ-QTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHT 626
V G ++ Q AV+E+ DV+KSLG++FVHKGTI++G +EVG+EV+A VD KLRQ AK HHT
Sbjct: 583 VNGGEDRSQAAVIEINDVQKSLGNIFVHKGTIKQGSVEVGKEVDACVDAKLRQGAKAHHT 642
Query: 627 ATHLLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANL 686
ATHLLQ+ALK V+G ETSQAGSLVAFDRLRFDFNFHRP+ + EL IE L+N WI +A
Sbjct: 643 ATHLLQSALKSVVGSETSQAGSLVAFDRLRFDFNFHRPVSEGELTRIELLVNQWISNAAH 702
Query: 687 LQTKVMALDDAKRAGAIAMFGEKYGEQVKI 716
L+TKVMAL DAK AGAIAMFGEKYGEQV++
Sbjct: 703 LETKVMALQDAKNAGAIAMFGEKYGEQVRV 732
>gi|313471497|sp|B8B4H5.1|SYAP_ORYSI RecName: Full=Probable alanine--tRNA ligase, chloroplastic;
AltName: Full=Alanyl-tRNA synthetase; Short=AlaRS;
Flags: Precursor
gi|218197887|gb|EEC80314.1| hypothetical protein OsI_22356 [Oryza sativa Indica Group]
Length = 996
Score = 1033 bits (2671), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 503/669 (75%), Positives = 579/669 (86%), Gaps = 1/669 (0%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
SGD+IR+RFLDFYA+RGHK+LPS+SLVP+DPTV LTIAGMLQFKPIFLGK PR+VP A T
Sbjct: 100 SGDAIRRRFLDFYAARGHKILPSSSLVPDDPTVFLTIAGMLQFKPIFLGKEPRRVPCATT 159
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
SQ+CIRTND+ENVGRTSRH TFFEMLGNFSFGDYFKKEAI WAWE +T EFGLP RLWI
Sbjct: 160 SQKCIRTNDIENVGRTSRHQTFFEMLGNFSFGDYFKKEAITWAWELTTKEFGLPPERLWI 219
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
SV++DDDEAF IW+ EVGVP E IKR+G DDNFW SGATGPCGPCSEIYYDF+P+RG SD
Sbjct: 220 SVFQDDDEAFSIWHNEVGVPKERIKRLGEDDNFWTSGATGPCGPCSEIYYDFYPERGSSD 279
Query: 229 VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDL 288
DLGDD+RFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTG+GLER+ARILQKVPNNYETDL
Sbjct: 280 ADLGDDSRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGMGLERMARILQKVPNNYETDL 339
Query: 289 IFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLI 348
IFPII+KA+ +A VSY ++D NLKIIGDH+RA+VYL+SDGV PSNIGRGYVVRRLI
Sbjct: 340 IFPIIEKAASMALVSYTTADDAMKTNLKIIGDHMRAVVYLISDGVIPSNIGRGYVVRRLI 399
Query: 349 RRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELR 408
RR VRTGRL+GI+GDG GN EGAFLPS+AE AI LST ID DV++R + IL EL+REELR
Sbjct: 400 RRVVRTGRLIGIRGDGHGNSEGAFLPSLAEVAISLSTEIDPDVESRRKSILGELQREELR 459
Query: 409 FVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGV 468
FVQTLERGEKLLD++L +ALS +G P LSG+D FLLYDT+GFPVEIT E+A E GV
Sbjct: 460 FVQTLERGEKLLDELLDEALSSAGNNGGKPCLSGKDVFLLYDTYGFPVEITAEIAGERGV 519
Query: 469 SVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTLSAKAIVESLL 528
VDMKGFD+EMENQR+QSQAAHN VKLSV + ++ + IPDTEFLGYD+LSA A+V+ LL
Sbjct: 520 IVDMKGFDMEMENQRKQSQAAHNVVKLSVGNETEIVKSIPDTEFLGYDSLSATAVVKGLL 579
Query: 529 VNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYV-TQGTNQQTAVVEVKDVKKS 587
VNG V VS+GSDVE+ L+RTPFYAESGGQ+GD GFLYV + +Q AV+E+ DV+KS
Sbjct: 580 VNGNSVNVVSEGSDVEIFLDRTPFYAESGGQVGDNGFLYVYGEEDAKQKAVIEINDVQKS 639
Query: 588 LGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQAG 647
LG++FVHKGTI++G +EVG+E++A VD KLRQ AK HHTATHLLQ+ALK +IG ETSQAG
Sbjct: 640 LGNIFVHKGTIKQGSVEVGKEIDAAVDAKLRQGAKAHHTATHLLQSALKSIIGSETSQAG 699
Query: 648 SLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAMFG 707
SLVAFDRLRFDFNFHRPL + EL +IE L+N W+ A L+TKVM L DAK AGAIAMFG
Sbjct: 700 SLVAFDRLRFDFNFHRPLSEEELMKIESLVNQWVSSATHLETKVMDLQDAKNAGAIAMFG 759
Query: 708 EKYGEQVKI 716
EKYGEQV++
Sbjct: 760 EKYGEQVRV 768
>gi|313471498|sp|B9FSH5.1|SYAP_ORYSJ RecName: Full=Probable alanine--tRNA ligase, chloroplastic;
AltName: Full=Alanyl-tRNA synthetase; Short=AlaRS
gi|222635304|gb|EEE65436.1| hypothetical protein OsJ_20798 [Oryza sativa Japonica Group]
Length = 932
Score = 1031 bits (2667), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 502/669 (75%), Positives = 579/669 (86%), Gaps = 1/669 (0%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
SGD+IR+RFLDFYA+RGHK+LPS+SLVP+DPTV LTIAGMLQFKPIFLGK PR+VP A T
Sbjct: 36 SGDAIRRRFLDFYAARGHKILPSSSLVPDDPTVFLTIAGMLQFKPIFLGKEPRRVPCATT 95
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
SQ+CIRTND+ENVGRTSRH TFFEMLGNFSFGDYFKKEAI WAWE +T EFGLP RLWI
Sbjct: 96 SQKCIRTNDIENVGRTSRHQTFFEMLGNFSFGDYFKKEAITWAWELTTKEFGLPPERLWI 155
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
SV++DDDEAF IW+ EVGVP E IKR+G DDNFW SGATGPCGPCSEIYYDF+P+RG SD
Sbjct: 156 SVFQDDDEAFSIWHNEVGVPKERIKRLGEDDNFWTSGATGPCGPCSEIYYDFYPERGSSD 215
Query: 229 VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDL 288
DLGDD+RFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTG+GLER+ARILQKVPNNYETDL
Sbjct: 216 ADLGDDSRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGMGLERMARILQKVPNNYETDL 275
Query: 289 IFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLI 348
IFPII+KA+ +A VSY ++D NLKIIGDH+RA+VYL+SDGV PSNIGRGYVVRRLI
Sbjct: 276 IFPIIEKAASMALVSYTTADDAMKTNLKIIGDHMRAVVYLISDGVIPSNIGRGYVVRRLI 335
Query: 349 RRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELR 408
RR VRTGRL+GI+GDG GN EGAFLPS+AE AI LST ID DV++R + IL EL+REELR
Sbjct: 336 RRVVRTGRLIGIRGDGHGNSEGAFLPSLAEVAISLSTEIDPDVESRRKSILGELQREELR 395
Query: 409 FVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGV 468
FVQTLERGEKLLD++L +ALS +G P LSG+D FLLYDT+GFPVEIT E++ E GV
Sbjct: 396 FVQTLERGEKLLDELLDEALSSAGNNGGKPCLSGKDVFLLYDTYGFPVEITAEISGERGV 455
Query: 469 SVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTLSAKAIVESLL 528
VDMKGFD+EMENQR+QSQAAHN VKLSV + ++ + IPDTEFLGYD+LSA A+V+ LL
Sbjct: 456 IVDMKGFDMEMENQRKQSQAAHNVVKLSVGNETEIVKSIPDTEFLGYDSLSATAVVKGLL 515
Query: 529 VNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYV-TQGTNQQTAVVEVKDVKKS 587
VNG V VS+GSDVE+ L+RTPFYAESGGQ+GD GFLYV + +Q AV+E+ DV+KS
Sbjct: 516 VNGNSVNVVSEGSDVEIFLDRTPFYAESGGQVGDNGFLYVYGEEDAKQKAVIEINDVQKS 575
Query: 588 LGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQAG 647
LG++FVHKGTI++G +EVG+E++A VD KLRQ AK HHTATHLLQ+ALK +IG ETSQAG
Sbjct: 576 LGNIFVHKGTIKQGSVEVGKEIDAAVDAKLRQGAKAHHTATHLLQSALKSIIGSETSQAG 635
Query: 648 SLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAMFG 707
SLVAFDRLRFDFNFHRPL + EL +IE L+N W+ A L+TKVM L DAK AGAIAMFG
Sbjct: 636 SLVAFDRLRFDFNFHRPLSEEELMKIESLVNQWVSSATHLETKVMDLQDAKNAGAIAMFG 695
Query: 708 EKYGEQVKI 716
EKYGEQV++
Sbjct: 696 EKYGEQVRV 704
>gi|326496549|dbj|BAJ94736.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 981
Score = 1012 bits (2616), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 493/694 (71%), Positives = 587/694 (84%), Gaps = 4/694 (0%)
Query: 24 SARSTSASVQPLTEEVEDKSQDFPSSGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLL 83
S++ST P+T + S ++ SGD+IR+RFLDFYA+RGHK+LPS+SLVP+DPTV L
Sbjct: 61 SSQSTMTGANPVTAAGTEGSSEW--SGDAIRRRFLDFYAARGHKILPSSSLVPDDPTVFL 118
Query: 84 TIAGMLQFKPIFLGKVPRQVPRAATSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYF 143
TIAGMLQFKPIFLGK PR+VP A TSQ+CIRTND+ENVGRTSRH TFFEMLGNFSFGDYF
Sbjct: 119 TIAGMLQFKPIFLGKEPRRVPCATTSQKCIRTNDIENVGRTSRHQTFFEMLGNFSFGDYF 178
Query: 144 KKEAIQWAWEFSTVEFGLPANRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWN 203
KK+AI+WAWE +T E+GLP RLWISV+EDDDE F IW EVGVP E IKRMG DDNFW
Sbjct: 179 KKDAIKWAWELTTKEYGLPPERLWISVFEDDDETFSIWLNEVGVPKERIKRMGEDDNFWT 238
Query: 204 SGATGPCGPCSEIYYDFHPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKN 263
SGATGPCGPCSE+YYDFHP+RG + DL DD+RFIEFYNLVFMQYNK DDGSLEPLKQKN
Sbjct: 239 SGATGPCGPCSEMYYDFHPERGSLNADLNDDSRFIEFYNLVFMQYNKNDDGSLEPLKQKN 298
Query: 264 IDTGLGLERIARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLR 323
IDTG+GLER+ARILQ VPNNYETDLIFPI++KA+ +A VSY++++D NLK+IGDH+R
Sbjct: 299 IDTGMGLERMARILQNVPNNYETDLIFPIMEKAASMALVSYSKADDAMRTNLKVIGDHMR 358
Query: 324 AIVYLLSDGVFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIEL 383
A+VYL+SDGV PSNIGRGYVVRRLIRR VRTGRL+G++GDG N EGA LPS+AE I L
Sbjct: 359 AVVYLISDGVIPSNIGRGYVVRRLIRRVVRTGRLIGMRGDGHENSEGAVLPSLAETVISL 418
Query: 384 STHIDSDVKAREQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQ 443
S+ ID DV++R + IL EL+REELRFVQTL RGEKLLD++L +AL + G VP LSG+
Sbjct: 419 SSEIDPDVESRRKSILGELQREELRFVQTLGRGEKLLDELLDEALGSAGDIG-VPCLSGK 477
Query: 444 DAFLLYDTFGFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADL 503
D FLLYDT+GFP+EIT E+A E GV++DMKGFDIEMENQR+QSQAAHN +KLSV + ++
Sbjct: 478 DVFLLYDTYGFPIEITAEIASERGVTIDMKGFDIEMENQRKQSQAAHNVIKLSVGNETEI 537
Query: 504 AEKIPDTEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDY 563
+ IPDTEFLGY++L A A+V+ LL+NG PV VS+G+DVE+LL+RTPFYAESGGQ+GD
Sbjct: 538 VKSIPDTEFLGYESLFATAVVKGLLINGSPVENVSEGTDVEILLDRTPFYAESGGQVGDN 597
Query: 564 GFLYV-TQGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAK 622
GFLYV + +Q AV+E+KDV+KSLG++FVHKGTI++G +EVG++++A VD KLRQ AK
Sbjct: 598 GFLYVYEEEGGKQNAVIEIKDVQKSLGNIFVHKGTIKQGSIEVGKKIDAAVDGKLRQGAK 657
Query: 623 VHHTATHLLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIG 682
HHTATHLLQ+ALK VIG ETSQAGSLVAFDRLRFDF+FHRPL + EL EIE L+N WI
Sbjct: 658 AHHTATHLLQSALKSVIGSETSQAGSLVAFDRLRFDFSFHRPLTEKELLEIESLVNQWIS 717
Query: 683 DANLLQTKVMALDDAKRAGAIAMFGEKYGEQVKI 716
DA L+T VMAL DAK AGA AMFGEKYGEQV++
Sbjct: 718 DATHLETNVMALQDAKNAGATAMFGEKYGEQVRV 751
>gi|357124651|ref|XP_003564011.1| PREDICTED: probable alanyl-tRNA synthetase, chloroplastic-like
isoform 1 [Brachypodium distachyon]
Length = 971
Score = 1009 bits (2610), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 506/730 (69%), Positives = 595/730 (81%), Gaps = 16/730 (2%)
Query: 1 MAHYYPSILPCGHFLF---KGATGVPSARSTSASV----------QPLTEEVEDKSQDFP 47
+ YP I P L + G S R+++ASV P+T VED
Sbjct: 14 LPSVYPHISPAPPSLVLRRRHGRGSLSRRTSAASVVCCSGSLPVANPVT--VEDTEISAE 71
Query: 48 SSGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
SGD+IR+RFLDFYA+RGHK+LPS+SLVP+DPTV LTIAGMLQFKPIFLGK PR+VP A
Sbjct: 72 WSGDAIRRRFLDFYAARGHKILPSSSLVPDDPTVFLTIAGMLQFKPIFLGKEPRRVPCAT 131
Query: 108 TSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
TSQ+CIRTND+ENVGRTSRH TFFEMLGNFSFGDYFKK+AI+WAWE +T E+GL RLW
Sbjct: 132 TSQKCIRTNDIENVGRTSRHQTFFEMLGNFSFGDYFKKDAIKWAWELTTKEYGLLPERLW 191
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCS 227
ISV+EDDDEAF IW VGVP E IKR+G DDNFW SGATGPCGPCSE+YYDFHP+RG S
Sbjct: 192 ISVFEDDDEAFSIWRDVVGVPEERIKRLGEDDNFWTSGATGPCGPCSEMYYDFHPERGSS 251
Query: 228 DVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETD 287
DL DD+RFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTG+GLER+ARILQ VPNNYETD
Sbjct: 252 TADLADDSRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGMGLERMARILQNVPNNYETD 311
Query: 288 LIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRL 347
LIFPIIKKA+ +A VSY+ ++D NLKIIGDH+RA+VYL+SDGV PSNIGRGYVVRRL
Sbjct: 312 LIFPIIKKAASMALVSYSTADDTMKTNLKIIGDHMRAVVYLISDGVIPSNIGRGYVVRRL 371
Query: 348 IRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREEL 407
IRR VRTGRL+G++GDG N E AFLPS+AE I LS+ ID DV +R + I+ EL+REEL
Sbjct: 372 IRRVVRTGRLVGMRGDGPENSESAFLPSLAEAVISLSSEIDPDVGSRRKSIIGELQREEL 431
Query: 408 RFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHG 467
RFVQTL RGEKLLD++L +AL ++G P LSG+D FLLYDT+GFPVEIT E+A E G
Sbjct: 432 RFVQTLGRGEKLLDELLDEALVSAGDNGDNPCLSGEDVFLLYDTYGFPVEITAEIAGERG 491
Query: 468 VSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTLSAKAIVESL 527
V+VDMKGFDIEMENQR+QSQAAHN VKLSV + ++ + IPDTEFLGYD+LSA A+V+ L
Sbjct: 492 VTVDMKGFDIEMENQRKQSQAAHNVVKLSVGNENEIVKSIPDTEFLGYDSLSATAVVKGL 551
Query: 528 LVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYV-TQGTNQQTAVVEVKDVKK 586
L++G PV VS+GSDVE+LL+RTPFYAESGGQ+GD GFLYV + +Q V+E+KDV+K
Sbjct: 552 LIDGNPVEHVSEGSDVEILLDRTPFYAESGGQVGDNGFLYVYEEEGGKQNTVIEIKDVQK 611
Query: 587 SLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQA 646
SLG++FVHKGTI++G ++VG++++A VD KLRQ AK HHTATHLLQ+ALK VIG ETSQA
Sbjct: 612 SLGNIFVHKGTIKQGSVDVGKKIDAAVDGKLRQGAKAHHTATHLLQSALKSVIGSETSQA 671
Query: 647 GSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAMF 706
GSLVAFDRLRFDF+FHRPL + EL EIE L+N WI +A L+T VMAL DAK AGA AMF
Sbjct: 672 GSLVAFDRLRFDFSFHRPLSEKELLEIESLVNQWISNATHLETNVMALQDAKNAGATAMF 731
Query: 707 GEKYGEQVKI 716
GEKYGEQV++
Sbjct: 732 GEKYGEQVRV 741
>gi|357124653|ref|XP_003564012.1| PREDICTED: probable alanyl-tRNA synthetase, chloroplastic-like
isoform 2 [Brachypodium distachyon]
Length = 977
Score = 1005 bits (2599), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/736 (69%), Positives = 597/736 (81%), Gaps = 22/736 (2%)
Query: 1 MAHYYPSILPCGHFLF---KGATGVPSARSTSASV----------QPLTEEVEDKSQDFP 47
+ YP I P L + G S R+++ASV P+T VED
Sbjct: 14 LPSVYPHISPAPPSLVLRRRHGRGSLSRRTSAASVVCCSGSLPVANPVT--VEDTEISAE 71
Query: 48 SSGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
SGD+IR+RFLDFYA+RGHK+LPS+SLVP+DPTV LTIAGMLQFKPIFLGK PR+VP A
Sbjct: 72 WSGDAIRRRFLDFYAARGHKILPSSSLVPDDPTVFLTIAGMLQFKPIFLGKEPRRVPCAT 131
Query: 108 TSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
TSQ+CIRTND+ENVGRTSRH TFFEMLGNFSFGDYFKK+AI+WAWE +T E+GL RLW
Sbjct: 132 TSQKCIRTNDIENVGRTSRHQTFFEMLGNFSFGDYFKKDAIKWAWELTTKEYGLLPERLW 191
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRG-- 225
ISV+EDDDEAF IW VGVP E IKR+G DDNFW SGATGPCGPCSE+YYDFHP+RG
Sbjct: 192 ISVFEDDDEAFSIWRDVVGVPEERIKRLGEDDNFWTSGATGPCGPCSEMYYDFHPERGSS 251
Query: 226 ---CSD-VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVP 281
C D VDL DD+RFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTG+GLER+ARILQ VP
Sbjct: 252 TAVCKDSVDLADDSRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGMGLERMARILQNVP 311
Query: 282 NNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRG 341
NNYETDLIFPIIKKA+ +A VSY+ ++D NLKIIGDH+RA+VYL+SDGV PSNIGRG
Sbjct: 312 NNYETDLIFPIIKKAASMALVSYSTADDTMKTNLKIIGDHMRAVVYLISDGVIPSNIGRG 371
Query: 342 YVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEE 401
YVVRRLIRR VRTGRL+G++GDG N E AFLPS+AE I LS+ ID DV +R + I+ E
Sbjct: 372 YVVRRLIRRVVRTGRLVGMRGDGPENSESAFLPSLAEAVISLSSEIDPDVGSRRKSIIGE 431
Query: 402 LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKE 461
L+REELRFVQTL RGEKLLD++L +AL ++G P LSG+D FLLYDT+GFPVEIT E
Sbjct: 432 LQREELRFVQTLGRGEKLLDELLDEALVSAGDNGDNPCLSGEDVFLLYDTYGFPVEITAE 491
Query: 462 VAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTLSAK 521
+A E GV+VDMKGFDIEMENQR+QSQAAHN VKLSV + ++ + IPDTEFLGYD+LSA
Sbjct: 492 IAGERGVTVDMKGFDIEMENQRKQSQAAHNVVKLSVGNENEIVKSIPDTEFLGYDSLSAT 551
Query: 522 AIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYV-TQGTNQQTAVVE 580
A+V+ LL++G PV VS+GSDVE+LL+RTPFYAESGGQ+GD GFLYV + +Q V+E
Sbjct: 552 AVVKGLLIDGNPVEHVSEGSDVEILLDRTPFYAESGGQVGDNGFLYVYEEEGGKQNTVIE 611
Query: 581 VKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIG 640
+KDV+KSLG++FVHKGTI++G ++VG++++A VD KLRQ AK HHTATHLLQ+ALK VIG
Sbjct: 612 IKDVQKSLGNIFVHKGTIKQGSVDVGKKIDAAVDGKLRQGAKAHHTATHLLQSALKSVIG 671
Query: 641 QETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRA 700
ETSQAGSLVAFDRLRFDF+FHRPL + EL EIE L+N WI +A L+T VMAL DAK A
Sbjct: 672 SETSQAGSLVAFDRLRFDFSFHRPLSEKELLEIESLVNQWISNATHLETNVMALQDAKNA 731
Query: 701 GAIAMFGEKYGEQVKI 716
GA AMFGEKYGEQV++
Sbjct: 732 GATAMFGEKYGEQVRV 747
>gi|255587004|ref|XP_002534095.1| alanyl-tRNA synthetase, putative [Ricinus communis]
gi|223525858|gb|EEF28289.1| alanyl-tRNA synthetase, putative [Ricinus communis]
Length = 815
Score = 993 bits (2566), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 476/584 (81%), Positives = 534/584 (91%)
Query: 133 MLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWISVYEDDDEAFEIWNKEVGVPVEHI 192
MLGNFSFGDYFKKEAI+WAWE ST EFGL A+RLW+SVY+DDDEAFEIW+ EVGVP E I
Sbjct: 1 MLGNFSFGDYFKKEAIKWAWELSTKEFGLAADRLWVSVYKDDDEAFEIWHNEVGVPTERI 60
Query: 193 KRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKD 252
K+MG +DNFW SG TGPCGPCSE+YYDFHP+RG DVDLGDDTRFIEFYNLVFMQYNK D
Sbjct: 61 KKMGEEDNFWTSGITGPCGPCSELYYDFHPERGFLDVDLGDDTRFIEFYNLVFMQYNKMD 120
Query: 253 DGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTN 312
DGSLE LKQKNIDTGLGLER+ARILQKVPNNYETDLI+PII+K SELAN+SY+ ++D+T
Sbjct: 121 DGSLESLKQKNIDTGLGLERLARILQKVPNNYETDLIYPIIEKVSELANLSYSVADDQTK 180
Query: 313 LNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAF 372
LKIIGDHLRAIV+L+SDGV PSNIGRGYVVRRLIRR VRTGRLLGIKGDG+GNL+GAF
Sbjct: 181 TKLKIIGDHLRAIVFLISDGVLPSNIGRGYVVRRLIRRVVRTGRLLGIKGDGKGNLDGAF 240
Query: 373 LPSIAEKAIELSTHIDSDVKAREQRILEELKREELRFVQTLERGEKLLDQMLADALSRTR 432
+P+IAEK IELS HIDSDVKAR RILEEL+REE RFVQTLERGEKLLDQML DALS +
Sbjct: 241 IPAIAEKVIELSVHIDSDVKARASRILEELQREEFRFVQTLERGEKLLDQMLEDALSSGQ 300
Query: 433 ESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNA 492
+ G +P LSG+D FLLYDT+GFPVEIT EVAEEHGV +DM GFDIEME QRRQSQAAHN
Sbjct: 301 KKGVIPCLSGKDVFLLYDTYGFPVEITTEVAEEHGVKIDMDGFDIEMEKQRRQSQAAHNV 360
Query: 493 VKLSVDDSADLAEKIPDTEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPF 552
+KL+V+D DL+E + DTEFLGYDTLSA+A+++SLLVNGKPVI+V +GS+VE+LLN+TPF
Sbjct: 361 IKLTVEDGGDLSENVSDTEFLGYDTLSARAVIDSLLVNGKPVIQVPEGSEVEILLNKTPF 420
Query: 553 YAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAI 612
YAESGGQIGD+GFLYVT+G ++ A+VE+KDV+KSLG+VFVHKGTIREG+LEVGREVEA
Sbjct: 421 YAESGGQIGDHGFLYVTEGESKPRAIVEIKDVQKSLGNVFVHKGTIREGLLEVGREVEAA 480
Query: 613 VDPKLRQRAKVHHTATHLLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEE 672
VDPKLRQRAKVHHTATHLLQ+ALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEE
Sbjct: 481 VDPKLRQRAKVHHTATHLLQSALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEE 540
Query: 673 IERLINGWIGDANLLQTKVMALDDAKRAGAIAMFGEKYGEQVKI 716
IE LINGWIGDA LLQTKVM++ DAK AGAIAMFGEKYGEQV++
Sbjct: 541 IEALINGWIGDATLLQTKVMSITDAKNAGAIAMFGEKYGEQVRV 584
>gi|302823356|ref|XP_002993331.1| hypothetical protein SELMODRAFT_136926 [Selaginella moellendorffii]
gi|300138840|gb|EFJ05593.1| hypothetical protein SELMODRAFT_136926 [Selaginella moellendorffii]
Length = 920
Score = 892 bits (2305), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/682 (63%), Positives = 536/682 (78%), Gaps = 16/682 (2%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGK---------- 98
SGD+IR+ FL+F+A+RGH++LP +SLVP+DPTVLLTIAGMLQFKPIFLG+
Sbjct: 10 SGDAIRRTFLNFFAARGHQLLPGSSLVPDDPTVLLTIAGMLQFKPIFLGQATTLDNVLLS 69
Query: 99 ---VPRQVPRAATSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFS 155
VPR+ A TSQ+C+RTND+ENVGRTSRHHTFFEMLGNFSFGDYFK +AI+WAWE +
Sbjct: 70 RAQVPRRFACAVTSQKCLRTNDIENVGRTSRHHTFFEMLGNFSFGDYFKHDAIRWAWELA 129
Query: 156 TVEFGLPANRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSE 215
T E+ LPA R+W+SVY+DDDEA IW VG+P E IK++G +DNFW SG TGPCGPCSE
Sbjct: 130 TSEYKLPAARVWVSVYKDDDEALAIWRDHVGIPEERIKKLGEEDNFWASGPTGPCGPCSE 189
Query: 216 IYYDFHPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
+Y+DFHP+RG D DLGDDTRF+EFYNLVFMQYN+ DDG LE LKQKNIDTGLGLER+AR
Sbjct: 190 MYFDFHPERGTDDADLGDDTRFLEFYNLVFMQYNRNDDGKLELLKQKNIDTGLGLERMAR 249
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
ILQKVPNNYETDLI+PII++ASELA V+Y ++DRT LK+IGDH RA+VYL+SDGV P
Sbjct: 250 ILQKVPNNYETDLIYPIIQRASELAGVNYTAADDRTKTYLKVIGDHSRAVVYLISDGVTP 309
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SNIGRGY+VRRLIRR VR GRLLGI+GDG GN EG FLPS+A+ I +S+++D DVK
Sbjct: 310 SNIGRGYIVRRLIRRIVRMGRLLGIRGDGEGNSEGTFLPSLAKVVISMSSNVDPDVKQNA 369
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSV-PRLSGQDAFLLYDTFGF 454
RI EEL++EELRFVQTLERGEKLL Q L +A + R GS P LSG+D F+LYDT+GF
Sbjct: 370 GRIFEELEKEELRFVQTLERGEKLLSQKLEEAAAACRRDGSTKPVLSGKDVFMLYDTYGF 429
Query: 455 PVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLG 514
PVEIT+EVA E+ V VDM GF+ EME QRRQSQ AHN VKLS +A + +T+F+G
Sbjct: 430 PVEITEEVAGENDVQVDMAGFETEMEYQRRQSQEAHNVVKLSAGGTAAELTSLVETKFVG 489
Query: 515 YDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQ 574
Y TL + A V +L+ G V +V +G +VE++L+ TPFYAESGGQIGD G L G +
Sbjct: 490 YTTLESIAEVRALIARGGLVTEVREGDEVEIVLDTTPFYAESGGQIGDNGLLVCRGG--E 547
Query: 575 QTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAA 634
+V+VKDV+K ++ +HKG +++G + VG V+A+V+ LR+RA+ HTATHLLQAA
Sbjct: 548 TDCIVQVKDVQKLGSNLIIHKGIVQQGTMAVGNNVQALVESSLRRRAQAQHTATHLLQAA 607
Query: 635 LKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMAL 694
LKKV+G ETSQAGSLVAFDRLRFDF R + + E+ ++E L+N WI A L+ KVM L
Sbjct: 608 LKKVLGSETSQAGSLVAFDRLRFDFTLSRKMAEEEVVQVEALVNEWISMAVPLEWKVMPL 667
Query: 695 DDAKRAGAIAMFGEKYGEQVKI 716
+AK +GAIAMFGEKYGEQV++
Sbjct: 668 AEAKNSGAIAMFGEKYGEQVRV 689
>gi|302801948|ref|XP_002982730.1| hypothetical protein SELMODRAFT_116848 [Selaginella moellendorffii]
gi|300149829|gb|EFJ16483.1| hypothetical protein SELMODRAFT_116848 [Selaginella moellendorffii]
Length = 934
Score = 890 bits (2299), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/705 (62%), Positives = 543/705 (77%), Gaps = 17/705 (2%)
Query: 27 STSASVQPLTEEVEDKSQDFPSSGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIA 86
+TS +E E + + SGD+IR+ FL+F+A+RGH +LP +SLVP+DPTVLLTIA
Sbjct: 1 ATSVETTSSAQEQEHEHEQPGVSGDAIRRTFLNFFAARGHHLLPGSSLVPDDPTVLLTIA 60
Query: 87 GMLQFKPIFLGK-------------VPRQVPRAATSQRCIRTNDVENVGRTSRHHTFFEM 133
GMLQFKPIFLG+ VPR+ A TSQ+C+RTND+ENVGRTSRHHTFFEM
Sbjct: 61 GMLQFKPIFLGQATTLDSVLLSRAQVPRRFACAVTSQKCLRTNDIENVGRTSRHHTFFEM 120
Query: 134 LGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWISVYEDDDEAFEIWNKEVGVPVEHIK 193
LGNFSFGDYFK +AI+WAWE +T E+ LPA R+W+SVY+DDDEA IW VG+P E IK
Sbjct: 121 LGNFSFGDYFKHDAIRWAWELATSEYKLPAARVWVSVYKDDDEALAIWRDHVGIPEERIK 180
Query: 194 RMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD-VDLGDDTRFIEFYNLVFMQYNKKD 252
++G +DNFW SG TGPCGPCSE+Y+DFHP+RG D VDLGDDTRF+EFYNLVFMQYN+ D
Sbjct: 181 KLGEEDNFWASGPTGPCGPCSEMYFDFHPERGTDDAVDLGDDTRFLEFYNLVFMQYNRND 240
Query: 253 DGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTN 312
DG LE LKQKNIDTGLGLER+ARILQKVPNNYETDLI+PII++ASELA V+Y ++DRT
Sbjct: 241 DGKLELLKQKNIDTGLGLERMARILQKVPNNYETDLIYPIIQRASELAGVNYTAADDRTK 300
Query: 313 LNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAF 372
LK+IGDH RA+VYL+SDGV PSNIGRGY+VRRLIRR VR GRLLGI+GDG GN EG F
Sbjct: 301 TYLKVIGDHSRAVVYLISDGVTPSNIGRGYIVRRLIRRIVRMGRLLGIRGDGEGNSEGTF 360
Query: 373 LPSIAEKAIELSTHIDSDVKAREQRILEELKREELRFVQTLERGEKLLDQMLADALSRTR 432
LPS+A+ + +S+++D DVK RI EEL +EELRFVQTLERGEKLL Q L +A + R
Sbjct: 361 LPSLAKVVVSMSSNVDPDVKQNAGRIFEELDKEELRFVQTLERGEKLLSQKLEEAAAACR 420
Query: 433 ESGSV-PRLSGQDAFLLYDTFGFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHN 491
GS P LSG+D F+LYDT+GFPVEIT+EVA E+ V VDM GF+ EME QRRQSQ AHN
Sbjct: 421 RDGSAKPVLSGKDVFMLYDTYGFPVEITEEVAGENDVQVDMAGFETEMEYQRRQSQEAHN 480
Query: 492 AVKLSVDDSADLAEKIPDTEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTP 551
VKLS +A + +T+F+GY TL + A V +L+ G V +V +G +VE++L+ TP
Sbjct: 481 VVKLSAGGTAAELTSLVETKFVGYTTLESIAEVRALIARGGLVTEVREGDEVEIVLDTTP 540
Query: 552 FYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEA 611
FYAESGGQIGD G L G + +V+VKDV+K ++ +HKG +++G + VG V+A
Sbjct: 541 FYAESGGQIGDNGLLVCRGG--ETDCIVQVKDVQKLGSNLIIHKGIVQQGTMAVGNNVQA 598
Query: 612 IVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELE 671
+V+ LR+RA+ HTATHLLQAALKKV+G ETSQAGSLVAFDRLRFDF R + + E+
Sbjct: 599 LVESSLRRRAQAQHTATHLLQAALKKVLGSETSQAGSLVAFDRLRFDFTLSRKMAEEEVV 658
Query: 672 EIERLINGWIGDANLLQTKVMALDDAKRAGAIAMFGEKYGEQVKI 716
++E L+N WI A L+ KVM L +AK +GAIAMFGEKYGEQV++
Sbjct: 659 QVEALVNEWISMAVPLEWKVMPLAEAKNSGAIAMFGEKYGEQVRV 703
>gi|168000843|ref|XP_001753125.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695824|gb|EDQ82166.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 927
Score = 886 bits (2289), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/692 (62%), Positives = 546/692 (78%), Gaps = 15/692 (2%)
Query: 28 TSASVQPLTEEVEDKSQDFPSSGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAG 87
T+ S++PL E++ GD+IRKRFL+FYA+RGHKVLPS+SLVP+DPTVLLTIAG
Sbjct: 23 TTESLKPLDPEIK---------GDAIRKRFLEFYAARGHKVLPSSSLVPDDPTVLLTIAG 73
Query: 88 MLQFKPIFLGKVPRQVPRAATSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEA 147
MLQFKPIFLG+VPR P A T+Q+ +RTND+ENVGRT+RHHTFFEMLGNFSFGDYFK++A
Sbjct: 74 MLQFKPIFLGQVPRSYPCATTTQKVVRTNDIENVGRTARHHTFFEMLGNFSFGDYFKRQA 133
Query: 148 IQWAWEFSTVEFGLPANRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGAT 207
I WAWE +T EF LP R+W+SV+EDDDEAF IW EVGVPVE IKRMGA+DNFW+SGAT
Sbjct: 134 IAWAWELATQEFKLPLERVWVSVFEDDDEAFAIWRDEVGVPVERIKRMGAEDNFWSSGAT 193
Query: 208 GPCGPCSEIYYDFHPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTG 267
GPCGPCSE+Y+DFHP+RG D DL DD+RFIEFYNLVFMQYN+ DDG LEPLK KNIDTG
Sbjct: 194 GPCGPCSEMYFDFHPERGTDDADLNDDSRFIEFYNLVFMQYNRTDDGQLEPLKNKNIDTG 253
Query: 268 LGLERIARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVY 327
LGLER+A+ILQ+VPNNYETDLI+PII +A+ LANV Y ++DR LK+IGDH RA+VY
Sbjct: 254 LGLERMAQILQQVPNNYETDLIYPIIARAAALANVDYQSADDRVKTYLKVIGDHTRAVVY 313
Query: 328 LLSDGVFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHI 387
L+SDGV+PSNIGRGY+VRRLIRR VR GRLLGI+GDG+GN EGAFLP++AE A+ +S +
Sbjct: 314 LISDGVYPSNIGRGYIVRRLIRRVVRMGRLLGIRGDGQGNQEGAFLPTVAEVAVAMSKDV 373
Query: 388 DSDVKAREQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFL 447
D +V+ ++ +I ELKREELRFVQTLE + A + + P LSG+D F
Sbjct: 374 DPNVEQQKIKIYNELKREELRFVQTLE--KGEKLLEELLAEALEKRGTDTPCLSGKDVFR 431
Query: 448 LYDTFGFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSA-DLAEK 506
LYDTFGFPVEIT+EVA E GV+VD+ GF+ EME QR+QSQAAHN +KL+V +A ++ +
Sbjct: 432 LYDTFGFPVEITEEVASERGVTVDLAGFESEMEIQRKQSQAAHNVIKLAVGGAAQEMLAQ 491
Query: 507 IPDTEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFL 566
+P+TEFLGYD L++ + + ++L NG+ + + S+G +VE+LL+RTPFYAESGGQ+GD+G+L
Sbjct: 492 VPETEFLGYDDLTSSSSILAILANGEALGEASEGEEVELLLDRTPFYAESGGQVGDHGYL 551
Query: 567 YVTQGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHT 626
V G ++ V+ + F H G +++G+++VG VEA VDP LR RA++HHT
Sbjct: 552 RVFGGDSEAVVKVKDVVKE---AGRFRHIGVVQDGIVKVGLGVEAEVDPVLRTRAQIHHT 608
Query: 627 ATHLLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANL 686
ATHLLQAALK V+G + SQAGSLV+FDRLRFDFN R + D E+ ++E L+N WIG
Sbjct: 609 ATHLLQAALKNVLGSDVSQAGSLVSFDRLRFDFNLPRAMTDAEINKVEMLVNEWIGMGVP 668
Query: 687 LQTKVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+ ++ MA+ AK GAIAMFGEKYGEQV++ S
Sbjct: 669 VTSEEMAIAAAKEKGAIAMFGEKYGEQVRVIS 700
>gi|428309118|ref|YP_007120095.1| alanyl-tRNA synthetase [Microcoleus sp. PCC 7113]
gi|428250730|gb|AFZ16689.1| alanyl-tRNA synthetase [Microcoleus sp. PCC 7113]
Length = 885
Score = 808 bits (2087), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/669 (59%), Positives = 515/669 (76%), Gaps = 17/669 (2%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
SG IR+ FLDF+A+RGHK LPSASLVPEDPTVLLTIAGML FKPIFLG+ + RA T
Sbjct: 9 SGSEIRQTFLDFFATRGHKALPSASLVPEDPTVLLTIAGMLPFKPIFLGQRQSEFSRATT 68
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
SQ+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFK++AI WAWE ST FGLP R+ I
Sbjct: 69 SQKCIRTNDIENVGRTARHHTFFEMLGNFSFGDYFKEQAIAWAWELSTQVFGLPPERIVI 128
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
SV+++DDEAF IW ++G+P + I+RMG DDNFW SG TGPCGPCSE+YYDFHP+RG +
Sbjct: 129 SVFKEDDEAFAIWRDQIGIPPQRIQRMGEDDNFWVSGPTGPCGPCSELYYDFHPERGDDN 188
Query: 229 VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDL 288
+DL DD+RFIEFYNLVFMQYN+ DG L PLK KNIDTG+GLER+A+ILQKVPNNYETDL
Sbjct: 189 IDLEDDSRFIEFYNLVFMQYNRDADGKLTPLKNKNIDTGMGLERMAQILQKVPNNYETDL 248
Query: 289 IFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLI 348
IFPIIK A+++A + YA+S+++T ++LK+IGDH+R++V++++DG+ SN+GRGYV+RRLI
Sbjct: 249 IFPIIKTAADIAGIDYAKSDEKTKVSLKVIGDHVRSVVHMIADGITASNVGRGYVLRRLI 308
Query: 349 RRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELR 408
RR VR GRL+GI+G+ F +AE AI LS +V+ RE I EL+REE +
Sbjct: 309 RRVVRHGRLIGIQGE--------FTAQVAESAIALSESAYPNVRIREDAIKAELQREESQ 360
Query: 409 FVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGV 468
F++TLERGEKLL ++L+ +L RT+ ++SG+DAF LYDT+GFP+E+T+E+AEE G+
Sbjct: 361 FLRTLERGEKLLAEILS-SLPRTQGGTKGGQISGKDAFTLYDTYGFPLELTQEIAEEQGL 419
Query: 469 SVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLSAKAIVESL 527
SVD+ GF+ EME QR +++ AH + L+V S D LAE I TEFLGY + A VE+L
Sbjct: 420 SVDIAGFEKEMEAQRERARDAHETIDLTVQGSLDKLAEHIQVTEFLGYKQPQSTAKVEAL 479
Query: 528 LVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVKKS 587
LV+GK V G+ V+V+L+RTPFYAESGGQIGD G+L + T +V V+DVKK
Sbjct: 480 LVDGKSVESAEAGNKVQVILDRTPFYAESGGQIGDRGYL------SGDTVLVRVEDVKKE 533
Query: 588 LGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQAG 647
FVH G+I G LEVG + A +D R+RA+ +HTATHLLQAALK+++ SQAG
Sbjct: 534 -SDFFVHFGSIERGTLEVGATLTAQIDRSCRRRAQANHTATHLLQAALKQIVDPGISQAG 592
Query: 648 SLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAMFG 707
SLV FDRLRFDFN R L E+++IE +N WI +A+ +V+ +++AKR GAIAMFG
Sbjct: 593 SLVDFDRLRFDFNSPRALTAQEVQQIEEQVNTWIAEAHTAAVEVLPIEEAKRRGAIAMFG 652
Query: 708 EKYGEQVKI 716
EKYG++V++
Sbjct: 653 EKYGDEVRV 661
>gi|209523613|ref|ZP_03272167.1| alanyl-tRNA synthetase [Arthrospira maxima CS-328]
gi|376004348|ref|ZP_09782062.1| alanyl-tRNA synthetase [Arthrospira sp. PCC 8005]
gi|209496018|gb|EDZ96319.1| alanyl-tRNA synthetase [Arthrospira maxima CS-328]
gi|375327240|emb|CCE17815.1| alanyl-tRNA synthetase [Arthrospira sp. PCC 8005]
Length = 876
Score = 805 bits (2079), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/669 (59%), Positives = 508/669 (75%), Gaps = 25/669 (3%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
SG IR++FL+FYA R HK++PSASLVPEDPTVLLTIAGMLQFKPIFLG+ PR+V RA T
Sbjct: 9 SGSEIRQKFLNFYAERQHKIMPSASLVPEDPTVLLTIAGMLQFKPIFLGQRPREVNRATT 68
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
SQ+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFK++AI W WE ST FGLP RL +
Sbjct: 69 SQKCIRTNDIENVGRTARHHTFFEMLGNFSFGDYFKEQAIAWGWEISTEVFGLPPERLIV 128
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
SV+E+DDEAF IW ++G+P I+RMG +DNFW SG TGPCGPCSEIYYDFHP++G +
Sbjct: 129 SVFEEDDEAFAIWRDQIGIPPHRIQRMGEEDNFWKSGPTGPCGPCSEIYYDFHPEKGDDN 188
Query: 229 VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDL 288
+DL DD+RFIEFYNLVFMQYN+ DG+L PL+ +NIDTG+GLER+A+ILQ VPNNYETDL
Sbjct: 189 IDLEDDSRFIEFYNLVFMQYNRDADGNLTPLQNQNIDTGMGLERMAQILQCVPNNYETDL 248
Query: 289 IFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLI 348
IFPIIK A++LA + YA+S+D+T ++LK+IGDHLRA+V+L++DGV SN+GRGY++RRLI
Sbjct: 249 IFPIIKTAADLAGIDYAKSDDKTKVSLKVIGDHLRAVVHLIADGVTASNVGRGYILRRLI 308
Query: 349 RRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELR 408
RR VR GRL+GI G+ F +AE AI LS + + + RE+ I EL+REE R
Sbjct: 309 RRVVRHGRLIGITGE--------FTTKVAETAIGLSEDVYPNTRERERVIKGELQREESR 360
Query: 409 FVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGV 468
F++TLERGEKLL ++LA ++SGQDAF+LYDT+GFP+E+T+E+AEE+G+
Sbjct: 361 FLETLERGEKLLAELLAKQPD---------QISGQDAFVLYDTYGFPLELTQEIAEENGL 411
Query: 469 SVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLSAKAIVESL 527
+VD+ GF+ EM QR++SQAAH + L+V S D LAE+I T FLGYD ++A VE++
Sbjct: 412 TVDVDGFEAEMSAQRKRSQAAHETIDLTVQGSLDKLAEQIHPTTFLGYDFPDSEATVEAV 471
Query: 528 LVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVKKS 587
L+ GK V + GS+V+++L++TPFY ESGGQIGD G+L + +V V DVKK
Sbjct: 472 LIAGKSVTEAVAGSEVQIVLDQTPFYGESGGQIGDRGYLTTSD------VIVRVDDVKKD 525
Query: 588 LGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQAG 647
+F+H G + G L G V A +D R+RA+ +HTATHLLQAALK ++ SQAG
Sbjct: 526 -SDIFIHFGRVERGTLTAGITVNARIDRACRRRAQANHTATHLLQAALKLIVDPGISQAG 584
Query: 648 SLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAMFG 707
SLVAFDRLRFDFN R L EL+++E +N WI +A+ MAL++AK GAIAMFG
Sbjct: 585 SLVAFDRLRFDFNCPRALTTEELQQVENQVNSWIAEAHPATVTQMALEEAKNKGAIAMFG 644
Query: 708 EKYGEQVKI 716
EKY V++
Sbjct: 645 EKYAAVVRV 653
>gi|423065901|ref|ZP_17054691.1| alanyl-tRNA synthetase [Arthrospira platensis C1]
gi|406712659|gb|EKD07843.1| alanyl-tRNA synthetase [Arthrospira platensis C1]
Length = 876
Score = 805 bits (2079), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/669 (59%), Positives = 508/669 (75%), Gaps = 25/669 (3%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
SG IR++FL+FYA R HK++PSASLVPEDPTVLLTIAGMLQFKPIFLG+ PR+V RA T
Sbjct: 9 SGSEIRQKFLNFYAERQHKIMPSASLVPEDPTVLLTIAGMLQFKPIFLGQRPREVNRATT 68
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
SQ+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFK++AI W WE ST FGLP RL +
Sbjct: 69 SQKCIRTNDIENVGRTARHHTFFEMLGNFSFGDYFKEQAIAWGWEISTEVFGLPPERLIV 128
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
SV+E+DDEAF IW ++G+P I+RMG +DNFW SG TGPCGPCSEIYYDFHP++G +
Sbjct: 129 SVFEEDDEAFAIWRDQIGIPPHRIQRMGEEDNFWKSGPTGPCGPCSEIYYDFHPEKGDDN 188
Query: 229 VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDL 288
+DL DD+RFIEFYNLVFMQYN+ DG+L PL+ +NIDTG+GLER+A+ILQ VPNNYETDL
Sbjct: 189 IDLEDDSRFIEFYNLVFMQYNRDADGNLTPLQNQNIDTGMGLERMAQILQCVPNNYETDL 248
Query: 289 IFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLI 348
IFPIIK A++LA + YA+S+D+T ++LK+IGDHLRA+V+L++DGV SN+GRGY++RRLI
Sbjct: 249 IFPIIKTAADLAGIDYAKSDDKTKVSLKVIGDHLRAVVHLIADGVTASNVGRGYILRRLI 308
Query: 349 RRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELR 408
RR VR GRL+GI G+ F +AE AI LS + + + RE+ I EL+REE R
Sbjct: 309 RRVVRHGRLIGITGE--------FTTKVAETAIGLSEDVYPNTRERERVIKGELQREESR 360
Query: 409 FVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGV 468
F++TLERGEKLL ++LA ++SGQDAF+LYDT+GFP+E+T+E+AEE+G+
Sbjct: 361 FLETLERGEKLLAELLAKQPD---------QISGQDAFVLYDTYGFPLELTQEIAEENGL 411
Query: 469 SVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLSAKAIVESL 527
+VD+ GF+ EM QR++SQAAH + L+V S D LAE+I T FLGYD ++A VE++
Sbjct: 412 TVDVDGFEAEMSAQRKRSQAAHETIDLTVQGSLDKLAEQIHPTTFLGYDFPDSEATVEAV 471
Query: 528 LVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVKKS 587
L+ GK V + GS+V+++L++TPFY ESGGQIGD G+L + +V V DVKK
Sbjct: 472 LIAGKSVTEAVAGSEVQIVLDQTPFYGESGGQIGDRGYLTTSD------VIVRVDDVKKD 525
Query: 588 LGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQAG 647
+F+H G + G L G V A +D R+RA+ +HTATHLLQAALK ++ SQAG
Sbjct: 526 -SDIFIHFGRVERGTLTAGITVNARIDRACRRRAQANHTATHLLQAALKLIVDPGISQAG 584
Query: 648 SLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAMFG 707
SLVAFDRLRFDFN R L EL+++E +N WI +A+ MAL++AK GAIAMFG
Sbjct: 585 SLVAFDRLRFDFNCPRALTTEELQQVENQVNSWIAEAHPATVTQMALEEAKNKGAIAMFG 644
Query: 708 EKYGEQVKI 716
EKY V++
Sbjct: 645 EKYAAVVRV 653
>gi|86608988|ref|YP_477750.1| alanyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)]
gi|123751690|sp|Q2JLC4.1|SYA_SYNJB RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|86557530|gb|ABD02487.1| alanyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 884
Score = 803 bits (2074), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/673 (57%), Positives = 502/673 (74%), Gaps = 17/673 (2%)
Query: 46 FPS-SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVP 104
FP+ SG +IR+ FLDFYA RGH+VLPSASLVPEDPTVLLTIAGML FKPIFLG+ + P
Sbjct: 2 FPALSGAAIRQTFLDFYAQRGHQVLPSASLVPEDPTVLLTIAGMLPFKPIFLGQRDPEYP 61
Query: 105 RAATSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPAN 164
R T+Q+C+RTND+ENVGRT+RHHTFFEMLGNFSFGDYFKKEAI WAWE T FGLP
Sbjct: 62 RVTTAQKCVRTNDIENVGRTARHHTFFEMLGNFSFGDYFKKEAIAWAWELVTEVFGLPPE 121
Query: 165 RLWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDR 224
RL +SV+ +D+EAF +W E+G+P I+RMG DNFW +G TGPCGPCSEIYYDF P+
Sbjct: 122 RLVVSVFREDEEAFALWRDEIGIPAHRIQRMGEADNFWAAGPTGPCGPCSEIYYDFKPEL 181
Query: 225 GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNY 284
G +DL DD+RF+E YNLVFM+ N+ +G L PL ++NIDTGLGLER+A++LQ VPNNY
Sbjct: 182 GDERIDLEDDSRFLEIYNLVFMELNRDSEGHLMPLAKQNIDTGLGLERLAQVLQGVPNNY 241
Query: 285 ETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVV 344
ETDLIFPII+ A+ +A ++Y+++N ++LK+IGDH RA+++L++DGV PSN+ RGYV+
Sbjct: 242 ETDLIFPIIQTAAGIAGLNYSKANPEQQISLKVIGDHARAVMHLIADGVLPSNVDRGYVL 301
Query: 345 RRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKR 404
RRLIRR VR GRLLGI G+ F + E AI+L+ V+ RE I EL+R
Sbjct: 302 RRLIRRMVRHGRLLGI-GE-------PFTIPVIETAIQLAEAAYPQVRERETLIKTELQR 353
Query: 405 EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAE 464
EE +F++TLERGE+LL + S R+S S ++SG DAF L+DT+GFP+E+T+E+A+
Sbjct: 354 EEEQFLKTLERGERLLLDLFTAVESSRRDSSSPKQISGADAFKLFDTYGFPLELTQEIAQ 413
Query: 465 EHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLSAKAI 523
EHG SVD++GF+ EME QR++++AAH + L+ S D LA+ + TEFLGY SA+ +
Sbjct: 414 EHGFSVDLEGFEQEMEKQRQRARAAHQTIDLTAQGSLDELADFLSQTEFLGYSQSSARGV 473
Query: 524 VESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKD 583
VE+LLV GK V +V G V+V+L+RTPFYAE+GGQIGD G+L + +V ++D
Sbjct: 474 VEALLVEGKSVPQVEAGQAVQVVLDRTPFYAEAGGQIGDRGYL------SGDGLLVRIED 527
Query: 584 VKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQET 643
V+K G +FVH G + G+L VG V+A +D R+RA+ HHTATHLLQAALK+++
Sbjct: 528 VQKQ-GDLFVHFGRVERGILRVGDPVQAQIDLACRRRAQAHHTATHLLQAALKRIVDPSI 586
Query: 644 SQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAI 703
QAGSLVAFDRLRFDF RP+ ELE+IE L+N WI +A+ Q +M L +AK GA+
Sbjct: 587 GQAGSLVAFDRLRFDFTLSRPVTPEELEQIENLVNTWIAEAHAAQVAIMPLAEAKARGAV 646
Query: 704 AMFGEKYGEQVKI 716
AMFGEKYG +V++
Sbjct: 647 AMFGEKYGAEVRV 659
>gi|86606529|ref|YP_475292.1| alanyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab]
gi|123738092|sp|Q2JTG8.1|SYA_SYNJA RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|86555071|gb|ABD00029.1| alanyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab]
Length = 883
Score = 803 bits (2073), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/669 (58%), Positives = 501/669 (74%), Gaps = 20/669 (2%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
SG +IR+ FLDFYA RGH+VLPSASLVPEDPTVLLTIAGML FKPIFLG Q PR T
Sbjct: 6 SGAAIRQAFLDFYAQRGHQVLPSASLVPEDPTVLLTIAGMLPFKPIFLGHQDPQYPRVTT 65
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
+Q+C+RTND+ENVGRT+RHHTFFEMLGNFSFGDYFKKEAI WAWE T FGLP RL +
Sbjct: 66 AQKCVRTNDIENVGRTARHHTFFEMLGNFSFGDYFKKEAITWAWELVTEVFGLPPERLVV 125
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
SV+ +D+EAF +W +G+P I+RMG +DNFW +G TGPCGPCSEIYYDF P+ G
Sbjct: 126 SVFREDEEAFALWRDAIGIPPHRIRRMGEEDNFWAAGPTGPCGPCSEIYYDFKPELGDEQ 185
Query: 229 VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDL 288
+DLGDD+RF+E YNLVFM+ N+ +G L PL ++NIDTGLGLER+A++LQ VPNNYETDL
Sbjct: 186 IDLGDDSRFLEIYNLVFMELNRDSEGRLTPLARQNIDTGLGLERLAQVLQGVPNNYETDL 245
Query: 289 IFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLI 348
IFPI++KA+E+A V Y Q++ ++LK+IGDH RA+++L++DGV PSN+ RGYV+RRLI
Sbjct: 246 IFPIVQKAAEIARVDYFQASPEQKVSLKVIGDHARAVMHLIADGVIPSNVDRGYVLRRLI 305
Query: 349 RRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELR 408
RR VR GRLLGI E LP + E AI+L+ +V+ RE I EL+REE +
Sbjct: 306 RRMVRHGRLLGIG-------EPFTLP-VVETAIQLAEAAYPEVREREAVIKAELQREEEQ 357
Query: 409 FVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGV 468
F++TLERGE+LL + A+ + SG+ ++SG DAF L+DT+GFP+E+T+E+A+E G
Sbjct: 358 FLKTLERGERLLFDLFANVTA----SGAPKQISGADAFKLFDTYGFPLELTQEIAQERGF 413
Query: 469 SVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLSAKAIVESL 527
SVD++GF+ EME QR++++AAH + ++ S D LAE + +TEFLGY SA+ +VE+L
Sbjct: 414 SVDVQGFEQEMEKQRQRARAAHQTLDVTAQGSLDELAEFLIETEFLGYSQSSARGVVEAL 473
Query: 528 LVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVKKS 587
LV GK V +V G V+V+L+RTPFYAESGGQIGD G+L +V V+DV+K
Sbjct: 474 LVEGKSVPQVEAGQSVQVVLDRTPFYAESGGQIGDRGYL------AGDGVLVRVEDVQKR 527
Query: 588 LGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQAG 647
G +FVH G + G+L VG V+A +D R+RA+ HHTATHLLQAALKKV+ SQAG
Sbjct: 528 -GDLFVHFGWVERGILRVGDPVQAQIDLACRRRAQAHHTATHLLQAALKKVVDPSISQAG 586
Query: 648 SLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAMFG 707
SLVAFDRLRFDF RPL EL+++E L+N WI +A+ Q +M L +AK GAIAMFG
Sbjct: 587 SLVAFDRLRFDFTLSRPLTPEELQQVEDLVNTWIAEAHPAQVSIMPLAEAKARGAIAMFG 646
Query: 708 EKYGEQVKI 716
EKYG +V++
Sbjct: 647 EKYGAEVRV 655
>gi|291570537|dbj|BAI92809.1| alanyl-tRNA synthetase [Arthrospira platensis NIES-39]
Length = 878
Score = 803 bits (2073), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/669 (59%), Positives = 510/669 (76%), Gaps = 25/669 (3%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
SG IR++FL+FYA R HK++PSASLVPEDPTVLLTIAGMLQFKPIFLG+ PR+V RA T
Sbjct: 11 SGSEIRQKFLNFYAERQHKIMPSASLVPEDPTVLLTIAGMLQFKPIFLGQRPREVNRATT 70
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
SQ+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFK++AI W WE ST FGLP RL +
Sbjct: 71 SQKCIRTNDIENVGRTARHHTFFEMLGNFSFGDYFKEQAIAWGWEISTEVFGLPPERLIV 130
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
SV+++DDEAF IW ++G+P I+RMG +DNFW SG TGPCGPCSEIYYDFHP+RG
Sbjct: 131 SVFKEDDEAFAIWRDQIGIPPHRIQRMGEEDNFWKSGPTGPCGPCSEIYYDFHPERGDDH 190
Query: 229 VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDL 288
+DL DD+RFIEFYNLVFMQYN+ DG+L PL+ +NIDTG+GLER+A+ILQ VPNNYETDL
Sbjct: 191 IDLEDDSRFIEFYNLVFMQYNRDADGNLTPLQNQNIDTGMGLERMAQILQCVPNNYETDL 250
Query: 289 IFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLI 348
IFPIIK A++LA + YA+S+++T ++LK+IGDHLRA+V+L++DGV SN+GRGY++RRLI
Sbjct: 251 IFPIIKTAADLAGIDYAKSDNKTKVSLKVIGDHLRAVVHLIADGVTASNVGRGYILRRLI 310
Query: 349 RRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELR 408
RR VR GRL+GI+G+ F +AE AI LS + + + RE+ I EL+REE R
Sbjct: 311 RRVVRHGRLIGIRGE--------FTTQVAETAISLSQDVYPNTRERERVIKGELQREESR 362
Query: 409 FVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGV 468
F++TLERGEKL LA+ L + E ++SGQDAF+LYDT+GFP+E+T+E+AEE+G+
Sbjct: 363 FLETLERGEKL----LAELLEKQPE-----QISGQDAFVLYDTYGFPLELTQEIAEENGL 413
Query: 469 SVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLSAKAIVESL 527
+VD++GF+ EM QR++SQAAH + L+V S D LAE+I T FLGYD ++A VE++
Sbjct: 414 TVDVEGFEAEMSAQRKRSQAAHETIDLTVQGSLDKLAEQIHPTAFLGYDFPDSEATVEAV 473
Query: 528 LVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVKKS 587
L+ GK V + GS+V+++L++TPFY ESGGQIGD G+L + +V V DVKK
Sbjct: 474 LIAGKSVTEAVAGSEVQIVLDQTPFYGESGGQIGDRGYLTTSD------VIVRVDDVKKD 527
Query: 588 LGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQAG 647
+F+H G + G L G V A +D R+RA+ +HTATHLLQAALK ++ SQAG
Sbjct: 528 -SDIFIHFGRVERGTLTAGITVNARIDRACRRRAQANHTATHLLQAALKLIVDPGISQAG 586
Query: 648 SLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAMFG 707
SLVAFDRLRFDFN R L EL+++E +N WI +A+ MAL++AK GAIAMFG
Sbjct: 587 SLVAFDRLRFDFNCPRALTTEELQQVENQVNSWIAEAHPATVTQMALEEAKNKGAIAMFG 646
Query: 708 EKYGEQVKI 716
EKY V++
Sbjct: 647 EKYAAVVRV 655
>gi|409991921|ref|ZP_11275144.1| alanyl-tRNA ligase [Arthrospira platensis str. Paraca]
gi|409937212|gb|EKN78653.1| alanyl-tRNA ligase [Arthrospira platensis str. Paraca]
Length = 876
Score = 803 bits (2073), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/669 (59%), Positives = 510/669 (76%), Gaps = 25/669 (3%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
SG IR++FL+FYA R HK++PSASLVPEDPTVLLTIAGMLQFKPIFLG+ PR+V RA T
Sbjct: 9 SGSEIRQKFLNFYAERQHKIMPSASLVPEDPTVLLTIAGMLQFKPIFLGQRPREVNRATT 68
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
SQ+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFK++AI W WE ST FGLP RL +
Sbjct: 69 SQKCIRTNDIENVGRTARHHTFFEMLGNFSFGDYFKEQAIAWGWEISTEVFGLPPERLIV 128
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
SV+++DDEAF IW ++G+P I+RMG +DNFW SG TGPCGPCSEIYYDFHP+RG
Sbjct: 129 SVFKEDDEAFAIWRDQIGIPPHRIQRMGEEDNFWKSGPTGPCGPCSEIYYDFHPERGDDH 188
Query: 229 VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDL 288
+DL DD+RFIEFYNLVFMQYN+ DG+L PL+ +NIDTG+GLER+A+ILQ VPNNYETDL
Sbjct: 189 IDLEDDSRFIEFYNLVFMQYNRDADGNLTPLQNQNIDTGMGLERMAQILQCVPNNYETDL 248
Query: 289 IFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLI 348
IFPIIK A++LA + YA+S+++T ++LK+IGDHLRA+V+L++DGV SN+GRGY++RRLI
Sbjct: 249 IFPIIKTAADLAGIDYAKSDNKTKVSLKVIGDHLRAVVHLIADGVTASNVGRGYILRRLI 308
Query: 349 RRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELR 408
RR VR GRL+GI+G+ F +AE AI LS + + + RE+ I EL+REE R
Sbjct: 309 RRVVRHGRLIGIRGE--------FTTQVAETAISLSQDVYPNTRERERVIKGELQREESR 360
Query: 409 FVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGV 468
F++TLERGEKL LA+ L + E ++SGQDAF+LYDT+GFP+E+T+E+AEE+G+
Sbjct: 361 FLETLERGEKL----LAELLEKQPE-----QISGQDAFVLYDTYGFPLELTQEIAEENGL 411
Query: 469 SVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLSAKAIVESL 527
+VD++GF+ EM QR++SQAAH + L+V S D LAE+I T FLGYD ++A VE++
Sbjct: 412 TVDVEGFEAEMSAQRKRSQAAHETIDLTVQGSLDKLAEQIHPTAFLGYDFPDSEATVEAV 471
Query: 528 LVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVKKS 587
L+ GK V + GS+V+++L++TPFY ESGGQIGD G+L + +V V DVKK
Sbjct: 472 LIAGKSVTEAVAGSEVQIVLDQTPFYGESGGQIGDRGYLTTSD------VIVRVDDVKKD 525
Query: 588 LGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQAG 647
+F+H G + G L G V A +D R+RA+ +HTATHLLQAALK ++ SQAG
Sbjct: 526 -SDIFIHFGRVERGTLTAGITVNARIDRACRRRAQANHTATHLLQAALKLIVDPGISQAG 584
Query: 648 SLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAMFG 707
SLVAFDRLRFDFN R L EL+++E +N WI +A+ MAL++AK GAIAMFG
Sbjct: 585 SLVAFDRLRFDFNCPRALTTEELQQVENQVNSWIAEAHPATVTQMALEEAKNKGAIAMFG 644
Query: 708 EKYGEQVKI 716
EKY V++
Sbjct: 645 EKYAAVVRV 653
>gi|119487555|ref|ZP_01621165.1| alanyl-tRNA synthetase [Lyngbya sp. PCC 8106]
gi|119455724|gb|EAW36860.1| alanyl-tRNA synthetase [Lyngbya sp. PCC 8106]
Length = 891
Score = 801 bits (2068), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/674 (58%), Positives = 504/674 (74%), Gaps = 21/674 (3%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
SG IR++FL+FYA RGHK++PSASLVPEDPTVLLTIAGML FKPIFLG+ P +VPRA T
Sbjct: 9 SGSEIRQKFLNFYAERGHKIMPSASLVPEDPTVLLTIAGMLPFKPIFLGQRPPEVPRATT 68
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
SQ+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFK +AI W WE ST FGLP RL +
Sbjct: 69 SQKCIRTNDIENVGRTARHHTFFEMLGNFSFGDYFKTQAIAWGWELSTEVFGLPPERLVV 128
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
SV+EDDDEAFEIW E+G+P I+RMG DDNFW SG TGPCGPCSEIYYDFHP+ G
Sbjct: 129 SVFEDDDEAFEIWRDEIGIPAHRIQRMGEDDNFWKSGPTGPCGPCSEIYYDFHPELGDDK 188
Query: 229 VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDL 288
+DL DDTRFIEFYNLVFMQYN+ +G+L PL+ KNIDTG+GLER+A+ILQ VPNNYETDL
Sbjct: 189 IDLEDDTRFIEFYNLVFMQYNRDAEGNLTPLQNKNIDTGMGLERMAQILQSVPNNYETDL 248
Query: 289 IFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLI 348
IFPIIK A+++A + Y +S+ +T ++LK+IGDH+RA+V+L++DGV SNIGRGY++RRLI
Sbjct: 249 IFPIIKTAADIAGIDYKKSDKKTQVSLKVIGDHVRAVVHLITDGVTASNIGRGYILRRLI 308
Query: 349 RRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELR 408
RR VR GRL+GI EG F +AE AI LS + + RE I EL+REE R
Sbjct: 309 RRVVRHGRLIGI--------EGEFTTKVAETAIRLSEEVYPQTRERETVIKAELQREEER 360
Query: 409 FVQTLERGEKLLDQMLADALSR-----TRESGSVPRLSGQDAFLLYDTFGFPVEITKEVA 463
F++TLERGEKLL ++ A+S+ + S +SG+DAF+LYDT+GFP+E+T+E+A
Sbjct: 361 FLETLERGEKLLTDIIEKAISKEIPPQSPLSKGGGMISGKDAFVLYDTYGFPLELTQEIA 420
Query: 464 EEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLSAKA 522
EE G++VD+ GF++EME QR +S+ AH + L+V S D LAE I T FLGY L ++A
Sbjct: 421 EESGLTVDVSGFEVEMEEQRNRSKDAHETIDLTVQGSLDKLAENIHPTAFLGYSELVSEA 480
Query: 523 IVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVK 582
+V+ +L+ GK V G+ V+++L++TPFYAESGGQIGD GFL VV VK
Sbjct: 481 VVKVILIEGKSVESAEAGTKVQIVLDQTPFYAESGGQIGDRGFLSFGD------TVVRVK 534
Query: 583 DVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQE 642
DV+K ++F+H G + G+L VG V A +D R+RA+ +HTATHLLQ+ALK ++
Sbjct: 535 DVQKE-SNIFIHLGKVERGILTVGMTVNAQIDRACRRRAQANHTATHLLQSALKLIVDPT 593
Query: 643 TSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGA 702
SQAGSLV+F+RLRFDFN R L E++++E +N WI +A+ M L+DAK GA
Sbjct: 594 ISQAGSLVSFERLRFDFNCPRSLTPEEVQQVEDQVNSWIAEAHPAIVAEMPLEDAKNKGA 653
Query: 703 IAMFGEKYGEQVKI 716
AMFGEKY + V++
Sbjct: 654 TAMFGEKYSDVVRV 667
>gi|300868714|ref|ZP_07113325.1| Alanyl-tRNA synthetase [Oscillatoria sp. PCC 6506]
gi|300333275|emb|CBN58517.1| Alanyl-tRNA synthetase [Oscillatoria sp. PCC 6506]
Length = 879
Score = 799 bits (2064), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/669 (58%), Positives = 505/669 (75%), Gaps = 22/669 (3%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
SG IR++FLDFYA RGHK+LPSASLVPEDPTVLLTIAGML FKPIFLG+ Q PRA T
Sbjct: 9 SGSEIRQKFLDFYAQRGHKILPSASLVPEDPTVLLTIAGMLPFKPIFLGQRSPQSPRATT 68
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
SQ+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFKK+AI WAWE T FGLP L I
Sbjct: 69 SQKCIRTNDIENVGRTARHHTFFEMLGNFSFGDYFKKQAIAWAWELCTEVFGLPPENLVI 128
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
SV+ +DDEAF++W KE+G+P + I+RMG +DNFW SG TGPCGPCSEIYYDFHP++G D
Sbjct: 129 SVFREDDEAFDLWAKEIGIPPQRIQRMGEEDNFWVSGPTGPCGPCSEIYYDFHPEKG-DD 187
Query: 229 VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDL 288
+DL DDTRFIE YNLVFMQYN+ G+L PL+ +NIDTG+GLER+A++LQKVPNNYETDL
Sbjct: 188 IDLEDDTRFIEIYNLVFMQYNRDAAGNLTPLQNQNIDTGMGLERMAQVLQKVPNNYETDL 247
Query: 289 IFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLI 348
IFPI+K A+E+A + Y+Q+++ T ++LK+IGDH+RA+V +++D + SNIGRGYV+RRLI
Sbjct: 248 IFPIVKTAAEIARIDYSQADENTKISLKVIGDHIRAVVNMIADEIRASNIGRGYVLRRLI 307
Query: 349 RRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELR 408
RRAVR GRL+GI EG F+ +AE AI L +V+ R I EL+REE
Sbjct: 308 RRAVRHGRLIGI--------EGGFITKVAETAIALCEDAYPNVRQRSAAIQAELEREEAN 359
Query: 409 FVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGV 468
F++TLERGEKL LA+ + R ++ G ++ GQDAF LYDT+GFP+E+T+E+AEE G+
Sbjct: 360 FLRTLERGEKL----LAEIIDRLQQQGK-NQIDGQDAFTLYDTYGFPLELTQEIAEEQGL 414
Query: 469 SVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLSAKAIVESL 527
+VD++GF+ ME QR + + AH + L+V S D LAE I TEF+GY LS+ V+ +
Sbjct: 415 TVDVEGFEQAMEEQRNRGKDAHETIDLTVQGSLDKLAENIHATEFVGYKQLSSNVQVKVI 474
Query: 528 LVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVKKS 587
LVNGK V + S+ S+++V+LN+TPFYAESGGQIGD G L + + +V+++DVKK
Sbjct: 475 LVNGKSVEEASEESEIQVILNQTPFYAESGGQIGDRGDL------SGDSILVKIEDVKKE 528
Query: 588 LGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQAG 647
FVH G I G L VG + A VD R+R + +H+ATHLLQAALK+++ SQAG
Sbjct: 529 -SDFFVHFGRIERGTLRVGDSMTAQVDNSRRRRVQANHSATHLLQAALKQIVDNSISQAG 587
Query: 648 SLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAMFG 707
SLV FDRLRFDFN R + EL++IE LIN WI +A+L + M + +AK+ GA+AMFG
Sbjct: 588 SLVDFDRLRFDFNCPRSITAEELQKIEDLINSWIAEAHLAEIAQMPIAEAKKKGAVAMFG 647
Query: 708 EKYGEQVKI 716
EKYG+ V++
Sbjct: 648 EKYGDVVRV 656
>gi|220906096|ref|YP_002481407.1| alanyl-tRNA synthetase [Cyanothece sp. PCC 7425]
gi|219862707|gb|ACL43046.1| alanyl-tRNA synthetase [Cyanothece sp. PCC 7425]
Length = 889
Score = 797 bits (2059), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/675 (57%), Positives = 514/675 (76%), Gaps = 21/675 (3%)
Query: 44 QDFPS-SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQ 102
+ PS SG IR+RFLDF+A+RGHK+LPSASLVPEDPTVLLTIAGML FKPIFLG+ +
Sbjct: 11 RSIPSMSGAEIRQRFLDFFAARGHKILPSASLVPEDPTVLLTIAGMLPFKPIFLGQQEAE 70
Query: 103 VPRAATSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLP 162
VPRA TSQ+C+R ND+ENVGRT+RHHTFFEMLGNFSFGDYFK +AI WAWE T + LP
Sbjct: 71 VPRATTSQKCVRNNDIENVGRTARHHTFFEMLGNFSFGDYFKPDAIAWAWELVTEVYHLP 130
Query: 163 ANRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHP 222
A+RL +SV++DDDEAFEIWN+++G+P + I+RMG D NFW +G TGPCGPCSEIY+DFHP
Sbjct: 131 ADRLVVSVFQDDDEAFEIWNQKIGLPPQRIRRMGEDSNFWAAGPTGPCGPCSEIYFDFHP 190
Query: 223 DRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPN 282
+RG ++DL DD+RF+E YNLVFMQYN+ +G+L PLK KNIDTG+GLER+A++LQ VPN
Sbjct: 191 ERGEQNIDLDDDSRFLELYNLVFMQYNRDAEGNLSPLKNKNIDTGMGLERMAQVLQGVPN 250
Query: 283 NYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGY 342
NYETDLIFPII+KA+E+A++ Y++S D T ++LK+IGDHLRA++++++DG+ SN+GRGY
Sbjct: 251 NYETDLIFPIIQKAAEIADLDYSKSTDSTKISLKVIGDHLRAVMHMIADGITASNVGRGY 310
Query: 343 VVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEEL 402
V+RRLIRR VR GRL+GI + F + E AIEL+ +V+ + I EL
Sbjct: 311 VLRRLIRRIVRHGRLIGI--------DKPFTAEVVETAIELAEAAYPNVRLKGDSIKAEL 362
Query: 403 KREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEV 462
+REE F++TL+RGEKL LAD +SR + ++SGQDAF LYDT+GFP+E+T+E+
Sbjct: 363 QREEESFLKTLDRGEKL----LADIISRVQSKPGKQQISGQDAFTLYDTYGFPLELTQEI 418
Query: 463 AEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLSAK 521
A E G++VD++GF+ EME QR++++ AH + L+V + D LAE I TEFLGY S+
Sbjct: 419 AAEQGLTVDLEGFEAEMEQQRQRARDAHETIDLTVQGTLDKLAEHIHTTEFLGYSQFSSP 478
Query: 522 AIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEV 581
+IV +LLV G+ V V G+ V+++L++TPFYAESGGQIGD G+L + T +V +
Sbjct: 479 SIVTALLVEGQTVTTVEAGTTVQIVLDQTPFYAESGGQIGDRGYL------SGDTLLVRI 532
Query: 582 KDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQ 641
+DV+K G +F+H G + G ++V V A +D R+R + HHTATHLLQ+ALKK++
Sbjct: 533 EDVQKESG-IFIHYGRVERGSVQVNDRVTAQIDLSCRRRVQAHHTATHLLQSALKKLVDD 591
Query: 642 ETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAG 701
SQAGSLV+FDRLRFDFN RP+ EL+ IE IN WI +A+ QT V+ + +AK G
Sbjct: 592 NISQAGSLVSFDRLRFDFNCPRPVTAAELQAIEDQINTWIAEAHPAQTSVLPIAEAKAKG 651
Query: 702 AIAMFGEKYGEQVKI 716
AIAMFGEKYG +V++
Sbjct: 652 AIAMFGEKYGSEVRV 666
>gi|307152653|ref|YP_003888037.1| alanyl-tRNA synthetase [Cyanothece sp. PCC 7822]
gi|306982881|gb|ADN14762.1| alanyl-tRNA synthetase [Cyanothece sp. PCC 7822]
Length = 881
Score = 797 bits (2059), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/669 (57%), Positives = 509/669 (76%), Gaps = 21/669 (3%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
SG IR FLDFYA + H++LPSASLVPEDPTVLLTIAGML FKPIFLG+ PRA T
Sbjct: 9 SGSEIRSYFLDFYAKKEHQILPSASLVPEDPTVLLTIAGMLPFKPIFLGQQKSDYPRATT 68
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
SQ+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFK++AI+WAWE ST FGLPANR+ +
Sbjct: 69 SQKCIRTNDIENVGRTARHHTFFEMLGNFSFGDYFKEQAIKWAWELSTKVFGLPANRIIV 128
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
SV+++DDEAFE+W ++G+P IKRMG +DNFW SG TGPCGPCSE+YYDFHP+ G +
Sbjct: 129 SVFQEDDEAFELWRDKIGIPPHRIKRMGEEDNFWKSGPTGPCGPCSELYYDFHPELGDKN 188
Query: 229 VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDL 288
+DL DD+RFIEFYNLVFMQYN+ G+L PL+ KNIDTG+GLER+A+ILQKVPNNYETDL
Sbjct: 189 IDLEDDSRFIEFYNLVFMQYNRDAQGNLTPLQNKNIDTGMGLERMAQILQKVPNNYETDL 248
Query: 289 IFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLI 348
IFPII+ A+E+A + Y +++++T ++LK+IGDH+RA+V++++DG+ SN+GRGY++RRLI
Sbjct: 249 IFPIIQSAAEIAGIDYKKADEKTKISLKVIGDHVRAVVHMIADGITASNVGRGYILRRLI 308
Query: 349 RRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELR 408
RR VR GRL+GI +GAF+ +AE AI LS I V+ RE I EL++EE
Sbjct: 309 RRVVRHGRLIGI--------DGAFINKVAEVAISLSEDIYPIVRVRETPIKAELQKEEAA 360
Query: 409 FVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGV 468
F+ TLERGEKLL +++AD R ++ ++SG DAF LYDT+GFP+E+T+E+AEE G+
Sbjct: 361 FLVTLERGEKLLSEIIADVKRRKKK-----QISGVDAFTLYDTYGFPLELTQEIAEEQGL 415
Query: 469 SVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLSAKAIVESL 527
+VD F+ EM+ Q+ +S+AAH + L+V S D LAE I T+FLGY ++ A +E +
Sbjct: 416 TVDEDQFNEEMKKQQERSKAAHETIDLTVQGSLDKLAEHIHPTQFLGYQDAASVAQIEVV 475
Query: 528 LVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVKKS 587
LV+GK V G++V+++LN+TPFYAESGGQIGD G++ + V+ V+DV+K
Sbjct: 476 LVDGKTVDSAEAGTEVQIVLNQTPFYAESGGQIGDKGYI------TGENLVIRVEDVQKE 529
Query: 588 LGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQAG 647
+ FVH G + G + VG + A +D R+R + HHTATHLLQAALKK++ + SQAG
Sbjct: 530 -SAFFVHFGRVERGTVSVGDTITATIDRACRRRVQAHHTATHLLQAALKKIVDESVSQAG 588
Query: 648 SLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAMFG 707
SLV FDRLRFDFN R + EL++IE LIN WI +A+ T +MAL++AK GA+AMFG
Sbjct: 589 SLVTFDRLRFDFNCPRAVTPQELQQIEDLINSWIAEAHDAHTYIMALEEAKAKGAVAMFG 648
Query: 708 EKYGEQVKI 716
EKYG +V++
Sbjct: 649 EKYGAEVRV 657
>gi|166365301|ref|YP_001657574.1| alanyl-tRNA synthetase [Microcystis aeruginosa NIES-843]
gi|205830148|sp|B0JI84.1|SYA_MICAN RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|166087674|dbj|BAG02382.1| alanyl-tRNA synthetase [Microcystis aeruginosa NIES-843]
Length = 874
Score = 791 bits (2043), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/669 (58%), Positives = 507/669 (75%), Gaps = 25/669 (3%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
SG IR+RFLDF+A+R HK+LPSASLVPEDPTVLLTIAGML FKPIFLG+ + PRA T
Sbjct: 6 SGSEIRQRFLDFFAARNHKILPSASLVPEDPTVLLTIAGMLPFKPIFLGQKTPEFPRATT 65
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
SQ+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFK++AI WAWE ST F LP RL +
Sbjct: 66 SQKCIRTNDIENVGRTARHHTFFEMLGNFSFGDYFKEQAIAWAWELSTEVFNLPPERLVV 125
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
SV+++D+EAF IW ++G+P I++MG +DNFW SG TGPCGPCSEIYYDFHP+ G
Sbjct: 126 SVFKEDEEAFAIWRDKIGIPAHRIQKMGEEDNFWVSGPTGPCGPCSEIYYDFHPELGDKT 185
Query: 229 VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDL 288
+DL DD+RFIEFYNLVFMQYN+ DG+L PL KNIDTG+GLER+A+ILQKV NNYETDL
Sbjct: 186 IDLEDDSRFIEFYNLVFMQYNRDADGNLTPLANKNIDTGMGLERMAQILQKVANNYETDL 245
Query: 289 IFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLI 348
IFPI+ +A+ LA + Y +++++T ++LK+IGDH+R++V++++DG+ SN RGYV+RRLI
Sbjct: 246 IFPIVAEAARLAAIDYQKADEKTKVSLKVIGDHVRSVVHMIADGISASNTDRGYVLRRLI 305
Query: 349 RRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELR 408
RR VR GRL+GI EG F+ +AE AI LS + +V+ RE I EL+REE R
Sbjct: 306 RRVVRHGRLIGI--------EGQFITKVAEVAIALSESVYGNVRERETVIKAELEREEAR 357
Query: 409 FVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGV 468
F++TLERGEKLL+ +L S ++SG DAF LYDT+GFP+E+T+E+AEE G+
Sbjct: 358 FLETLERGEKLLESILEKEKS---------QISGVDAFTLYDTYGFPLELTQEIAEEQGL 408
Query: 469 SVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLSAKAIVESL 527
SVD GF+ EM+ Q+++S+AAH + L+V S D LAE I TEFLGY L A A V ++
Sbjct: 409 SVDTAGFEQEMKKQQQRSKAAHETIDLTVQGSLDKLAEHIHPTEFLGYTDLQATATVTAV 468
Query: 528 LVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVKKS 587
LV GK V + G++V+V+L+RTPFYAESGGQIGD G+L G N ++ ++DV+K
Sbjct: 469 LVAGKTVESAAAGTEVQVVLDRTPFYAESGGQIGDKGYL---TGDN---LLIRIEDVQKE 522
Query: 588 LGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQAG 647
G +F+H G I G++ G + A +D R+RA+ +HTATHLLQ+ALKK++ SQAG
Sbjct: 523 SG-IFIHFGRIERGIVTTGDTINAQIDRSCRRRAQANHTATHLLQSALKKLVDGGISQAG 581
Query: 648 SLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAMFG 707
SLV+FDRLRFDFN RPL +EL+++E IN WI +A+ Q VM L++AK+ GAIAMFG
Sbjct: 582 SLVSFDRLRFDFNCPRPLTSSELQQVEEQINTWIAEAHDTQIAVMGLEEAKQKGAIAMFG 641
Query: 708 EKYGEQVKI 716
EKYG +V++
Sbjct: 642 EKYGSEVRV 650
>gi|16331117|ref|NP_441845.1| alanyl-tRNA synthetase [Synechocystis sp. PCC 6803]
gi|383322860|ref|YP_005383713.1| alanyl-tRNA synthetase [Synechocystis sp. PCC 6803 substr. GT-I]
gi|383326029|ref|YP_005386882.1| alanyl-tRNA synthetase [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|383491913|ref|YP_005409589.1| alanyl-tRNA synthetase [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|384437181|ref|YP_005651905.1| alanyl-tRNA synthetase [Synechocystis sp. PCC 6803]
gi|451815274|ref|YP_007451726.1| alanyl-tRNA synthetase [Synechocystis sp. PCC 6803]
gi|2500959|sp|P74423.1|SYA_SYNY3 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|1653611|dbj|BAA18523.1| alanyl-tRNA synthetase [Synechocystis sp. PCC 6803]
gi|339274213|dbj|BAK50700.1| alanyl-tRNA synthetase [Synechocystis sp. PCC 6803]
gi|359272179|dbj|BAL29698.1| alanyl-tRNA synthetase [Synechocystis sp. PCC 6803 substr. GT-I]
gi|359275349|dbj|BAL32867.1| alanyl-tRNA synthetase [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|359278519|dbj|BAL36036.1| alanyl-tRNA synthetase [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|407961510|dbj|BAM54750.1| alanyl-tRNA synthetase [Synechocystis sp. PCC 6803]
gi|451781243|gb|AGF52212.1| alanyl-tRNA synthetase [Synechocystis sp. PCC 6803]
Length = 877
Score = 790 bits (2041), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/669 (57%), Positives = 507/669 (75%), Gaps = 25/669 (3%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
SG IR++FL+F+A R H++LPSASLVPEDPTVLLTIAGML FKPIFLG+ + PRA T
Sbjct: 9 SGPEIRQQFLNFFADRQHQILPSASLVPEDPTVLLTIAGMLPFKPIFLGQKSAEFPRATT 68
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
SQ+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFK +AI WAWE ST F LPA RL +
Sbjct: 69 SQKCIRTNDIENVGRTARHHTFFEMLGNFSFGDYFKSQAIAWAWELSTQVFKLPAERLVV 128
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
SV+E+DDEAF IW E+G+P I+RMGADDNFW SG TGPCGPCSEIYYDFHP+ G
Sbjct: 129 SVFEEDDEAFAIWRDEIGIPAHRIQRMGADDNFWVSGPTGPCGPCSEIYYDFHPELGDEK 188
Query: 229 VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDL 288
+DL DD+RFIEFYNLVFMQYN+ + G+L PL++KNIDTG+GLER+A+ILQKVPNNYETDL
Sbjct: 189 LDLEDDSRFIEFYNLVFMQYNRDNAGNLTPLEKKNIDTGMGLERMAQILQKVPNNYETDL 248
Query: 289 IFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLI 348
IFPII+ A+ +A + YAQ+N++T ++LK+IGDH+R++V++++DG+ SN+GRGYV+RRLI
Sbjct: 249 IFPIIQTAANIAGIDYAQANEKTKVSLKVIGDHVRSVVHMIADGISASNLGRGYVLRRLI 308
Query: 349 RRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELR 408
RR VR GRLLGI G+ F +A A++L+ + +V R+ I +EL+REE
Sbjct: 309 RRVVRHGRLLGINGE--------FTTKVAATAVQLAQPVYPNVLERQSLIEQELQREEAA 360
Query: 409 FVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGV 468
F++TLERGEKLL ++AD V ++G DAF LYDTFGFP+E+T+E+AEE G+
Sbjct: 361 FLKTLERGEKLLADLMADG---------VTEIAGADAFTLYDTFGFPLELTQEIAEEQGI 411
Query: 469 SVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLSAKAIVESL 527
+VD++GF+ M+ Q+ +S+AAH + L+V +S D LA I TEFLGY L + AIV+++
Sbjct: 412 TVDVEGFEKAMQEQQERSKAAHETIDLTVQESLDKLANHIHPTEFLGYTDLQSSAIVKAV 471
Query: 528 LVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVKKS 587
LV G+ V + G V+++L++TPFY ESGGQIGD GFL N ++ ++DVK+
Sbjct: 472 LVGGELVDQAVAGQTVQIVLDQTPFYGESGGQIGDKGFL------NGDNLLIRIEDVKRE 525
Query: 588 LGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQAG 647
G +F+H G + G +++G + A +D R+RA+ +HTATHLLQ+ALK+V+ + SQAG
Sbjct: 526 SG-IFIHFGRVERGTVQIGTTITATIDRACRRRAQANHTATHLLQSALKRVVDEGISQAG 584
Query: 648 SLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAMFG 707
SLV F+RLRFDFN R + EL++IE LIN WI +A+ + VM + DAK GAIAMFG
Sbjct: 585 SLVDFNRLRFDFNSPRAVTMEELQQIEDLINQWIAEAHQTEVAVMPIADAKAKGAIAMFG 644
Query: 708 EKYGEQVKI 716
EKYG +V++
Sbjct: 645 EKYGAEVRV 653
>gi|428775001|ref|YP_007166788.1| alanyl-tRNA synthetase [Halothece sp. PCC 7418]
gi|428689280|gb|AFZ42574.1| alanyl-tRNA synthetase [Halothece sp. PCC 7418]
Length = 876
Score = 788 bits (2036), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/669 (59%), Positives = 509/669 (76%), Gaps = 25/669 (3%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
SG+ IR+ FLDFYA RGH+VLPSASLVPEDPTVLLTIAGML FKPIFLG+ RA T
Sbjct: 9 SGNQIRQTFLDFYAKRGHEVLPSASLVPEDPTVLLTIAGMLPFKPIFLGQKTAPYNRATT 68
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
SQ+CIRTND+ENVGRT RHHTFFEMLGNFSFGDYFK+EAIQWAWE ST FGL RL
Sbjct: 69 SQKCIRTNDIENVGRTKRHHTFFEMLGNFSFGDYFKEEAIQWAWELSTEGFGLDPERLVP 128
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
SVY++D+EAF IW ++GV I+RMG +DNFW +G TGPCGPCSEIYYDFHP+ G +
Sbjct: 129 SVYKEDEEAFAIWRDKIGVAPHRIQRMGEEDNFWAAGPTGPCGPCSEIYYDFHPELGDEE 188
Query: 229 VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDL 288
+DL DD+RFIEFYNLVFMQ+N+ +G+L PL+ +NIDTGLGLER+A+ILQ+VPNNYETDL
Sbjct: 189 IDLEDDSRFIEFYNLVFMQFNRDSEGNLTPLQNQNIDTGLGLERMAQILQQVPNNYETDL 248
Query: 289 IFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLI 348
IFPIIK A+E+AN+ Y+Q++++ ++LK+IGDH+RA+V++++DGV SN+GRGY++RRLI
Sbjct: 249 IFPIIKTAAEIANLDYSQADEKQQVSLKVIGDHVRAVVHMIADGVTASNLGRGYILRRLI 308
Query: 349 RRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELR 408
RR VR GRLLGI + F +AE AI L S+++ E++I +EL+REE R
Sbjct: 309 RRVVRHGRLLGITRE--------FTQDVAESAIALMEDHYSNLREGEKQIKQELQREESR 360
Query: 409 FVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGV 468
F++TLERGEKLL ++L +ES ++SG+DAF+LYDT+GFP+E+T+E+AEE G+
Sbjct: 361 FLETLERGEKLLGEIL------QKES---QQISGEDAFVLYDTYGFPLELTQEIAEEKGL 411
Query: 469 SVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLSAKAIVESL 527
+VD+ GF++EME QR++SQAAH + L V S D LA+ + TEF+GY A A VE++
Sbjct: 412 TVDLDGFEVEMEKQRQRSQAAHETIDLMVQGSLDKLAQSVHPTEFVGYTNPHASARVEAV 471
Query: 528 LVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVKKS 587
LV GK V + G V+++L++TPFYAESGGQIGD G+L G N +V ++DV+K
Sbjct: 472 LVQGKTVQEAEAGDQVQLVLDQTPFYAESGGQIGDRGYL---SGDN---LLVRIEDVQKE 525
Query: 588 LGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQAG 647
S+FVH G I G++ VG V A +D R+RA+ HHTATHLLQAALK++I SQAG
Sbjct: 526 -SSIFVHIGRIERGIIRVGDTVTATIDRACRRRAQAHHTATHLLQAALKQIIDPSVSQAG 584
Query: 648 SLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAMFG 707
SLVAFDRLRFDFN R + EL+++E IN WI +A+ Q+ VM DDAK GAIAMFG
Sbjct: 585 SLVAFDRLRFDFNCPRQITPDELQQVEDTINTWIAEAHDTQSDVMPFDDAKEKGAIAMFG 644
Query: 708 EKYGEQVKI 716
EKY + V++
Sbjct: 645 EKYDDIVRV 653
>gi|159030141|emb|CAO91033.1| alaS [Microcystis aeruginosa PCC 7806]
Length = 878
Score = 788 bits (2035), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/669 (58%), Positives = 505/669 (75%), Gaps = 25/669 (3%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
SG IR+RFLDF+A+R HK+LPSASLVPEDPTVLLTIAGML FKPIFLG+ + PRA T
Sbjct: 10 SGSEIRQRFLDFFAARNHKILPSASLVPEDPTVLLTIAGMLPFKPIFLGQKTPEFPRATT 69
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
SQ+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFK++AI WAWE ST F LP RL +
Sbjct: 70 SQKCIRTNDIENVGRTARHHTFFEMLGNFSFGDYFKEQAIAWAWELSTEVFNLPPERLVV 129
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
SV+++D+EAF IW ++G+P I++MG DNFW SG TGPCGPCSEIYYDFHP+ G
Sbjct: 130 SVFKEDEEAFAIWRDKIGIPAHRIQKMGEADNFWVSGPTGPCGPCSEIYYDFHPELGDKT 189
Query: 229 VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDL 288
+DL DD+RFIEFYNLVFMQYN+ DG+L PL KNIDTG+GLER+A+ILQKV NNYETDL
Sbjct: 190 IDLEDDSRFIEFYNLVFMQYNRDADGNLTPLANKNIDTGMGLERMAQILQKVANNYETDL 249
Query: 289 IFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLI 348
IFPI+ +A+ LA + Y +++++T ++LK+IGDH+R++V++++DG+ SN RGYV+RRLI
Sbjct: 250 IFPIVAEAARLAAIDYQKADEKTKVSLKVIGDHVRSVVHMIADGISASNTDRGYVLRRLI 309
Query: 349 RRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELR 408
RR VR GRL+GI EG F+ +AE AI LS + +V+ RE I EL+REE R
Sbjct: 310 RRVVRHGRLIGI--------EGQFITKVAEVAIALSESVYGNVRERETVIKAELEREEAR 361
Query: 409 FVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGV 468
F++TLERGEKLL+ +L S ++SG DAF LYDT+GFP+E+T+E+AEE G+
Sbjct: 362 FLETLERGEKLLESILEKEKS---------QISGVDAFTLYDTYGFPLELTQEIAEEQGL 412
Query: 469 SVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLSAKAIVESL 527
SVD GF+ EM+ Q+++S+AAH + L+V S D LAE I TEFLGY L A A V ++
Sbjct: 413 SVDTAGFEQEMKKQQQRSKAAHETIDLTVQGSLDKLAEHIHPTEFLGYTDLQATATVTAV 472
Query: 528 LVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVKKS 587
LV GK V + G++V+V+L++TPFYAESGGQIGD G+L G N ++ V+DV+K
Sbjct: 473 LVAGKTVESAAAGTEVQVVLDQTPFYAESGGQIGDKGYL---TGDN---LLIRVEDVQKE 526
Query: 588 LGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQAG 647
G +F+H G I GV+ G + A +D R+RA+ +HTATHLLQ+ALKK++ SQAG
Sbjct: 527 SG-IFIHFGRIERGVVTTGDTINAQIDRSCRRRAQANHTATHLLQSALKKLVDAGISQAG 585
Query: 648 SLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAMFG 707
SLV+F+RLRFDFN RPL EL+++E IN WI +A+ Q VM L++AK+ GAIAMFG
Sbjct: 586 SLVSFERLRFDFNCPRPLTSAELQQVEEQINTWIAEAHDTQIAVMGLEEAKQKGAIAMFG 645
Query: 708 EKYGEQVKI 716
EKYG +V++
Sbjct: 646 EKYGSEVRV 654
>gi|443666102|ref|ZP_21133731.1| alanyl-tRNA synthetase [Microcystis aeruginosa DIANCHI905]
gi|443331273|gb|ELS45939.1| alanyl-tRNA synthetase [Microcystis aeruginosa DIANCHI905]
Length = 874
Score = 787 bits (2032), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/669 (58%), Positives = 505/669 (75%), Gaps = 25/669 (3%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
SG IR+RFLDF+A+R HK+LPSASLVPEDPTVLLTIAGML FKPIFLG+ + PRA T
Sbjct: 6 SGSEIRQRFLDFFAARNHKILPSASLVPEDPTVLLTIAGMLPFKPIFLGQKTPEFPRATT 65
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
SQ+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFK++AI WAWE ST F LP RL +
Sbjct: 66 SQKCIRTNDIENVGRTARHHTFFEMLGNFSFGDYFKEQAIAWAWELSTEVFNLPPERLVV 125
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
SV+++D+EAF IW ++G+P I++MG DNFW SG TGPCGPCSEIYYDFHP+ G
Sbjct: 126 SVFKEDEEAFAIWRDKIGIPAHRIQKMGEADNFWVSGPTGPCGPCSEIYYDFHPELGDKT 185
Query: 229 VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDL 288
+DL DD+RFIEFYNLVFMQYN+ DG+L PL KNIDTG+GLER+A+ILQKV NNYETDL
Sbjct: 186 IDLEDDSRFIEFYNLVFMQYNRDADGNLTPLANKNIDTGMGLERMAQILQKVANNYETDL 245
Query: 289 IFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLI 348
IFPI+ +A+ LA + Y +++++T ++LK+IGDH+R++V++++DG+ SN RGYV+RRLI
Sbjct: 246 IFPIVAEAARLAAIDYQKADEKTKVSLKVIGDHVRSVVHMIADGISASNTDRGYVLRRLI 305
Query: 349 RRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELR 408
RR VR GRL+GI EG F+ +AE AI LS + +V+ RE I EL+REE R
Sbjct: 306 RRVVRHGRLIGI--------EGQFITKVAEVAIALSESVYGNVRERETVIKAELEREEAR 357
Query: 409 FVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGV 468
F++TLERGEKLL+ +L S ++SG DAF LYDT+GFP+E+T+E+AEE G+
Sbjct: 358 FLETLERGEKLLESILEKEKS---------QISGVDAFTLYDTYGFPLELTQEIAEEQGL 408
Query: 469 SVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLSAKAIVESL 527
SVD GF+ EM+ Q+++S+AAH + L+V S D LAE I TEFLGY L A A V ++
Sbjct: 409 SVDTAGFEQEMKKQQQRSKAAHETIDLTVQGSLDKLAEHIHPTEFLGYTDLQATATVTAV 468
Query: 528 LVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVKKS 587
LV GK V + G++V+V+L++TPFYAESGGQIGD G+L G N ++ V+DV+K
Sbjct: 469 LVAGKTVESAAAGTEVQVVLDQTPFYAESGGQIGDKGYL---TGDN---LLIRVEDVQKE 522
Query: 588 LGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQAG 647
G +F+H G I GV+ G + A +D R+RA+ +HTATHLLQ+ALKK++ SQAG
Sbjct: 523 SG-IFIHFGRIERGVVTTGDTINAQIDRSCRRRAQANHTATHLLQSALKKLVDAGISQAG 581
Query: 648 SLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAMFG 707
SLV+F+RLRFDFN RPL EL+++E IN WI +A+ Q VM L++AK+ GAIAMFG
Sbjct: 582 SLVSFERLRFDFNCPRPLTSAELQQVEEQINTWIAEAHDTQIAVMGLEEAKQKGAIAMFG 641
Query: 708 EKYGEQVKI 716
EKYG +V++
Sbjct: 642 EKYGSEVRV 650
>gi|34222740|sp|Q8DH56.2|SYA_THEEB RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
Length = 882
Score = 787 bits (2032), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/669 (56%), Positives = 503/669 (75%), Gaps = 16/669 (2%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
+GD IR++FLDFYA++GH +LPSASL+P+DPTVLLTIAGML FKPIFLG+ +VPRA T
Sbjct: 5 TGDQIRQKFLDFYAAKGHTILPSASLIPDDPTVLLTIAGMLPFKPIFLGQEAPKVPRATT 64
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
+Q+C+RTND+ENVGRT+RHHTFFEMLGNFSFGDYFK EAI WAWE T +GLP RL +
Sbjct: 65 AQKCLRTNDIENVGRTARHHTFFEMLGNFSFGDYFKGEAIAWAWELMTTVYGLPPERLLV 124
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
SV+E+DDEA++IW+++VG+P E I+RMG + NFW +G TGPCGPCSEIYYDF+P++G ++
Sbjct: 125 SVFENDDEAYDIWHRQVGLPKERIQRMGEESNFWTAGPTGPCGPCSEIYYDFYPEKGLAN 184
Query: 229 VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDL 288
VDL DD RFIE YNLVFM+ N+ D G PLK KNIDTG+GLER+A++LQ VPNNYETDL
Sbjct: 185 VDLDDDGRFIELYNLVFMELNQDDQGHRTPLKAKNIDTGMGLERMAQVLQGVPNNYETDL 244
Query: 289 IFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLI 348
IFPII+ A++ A + Y ++N T +LK+IGDH RA+V+L++DGV SN+GRGYV+RRLI
Sbjct: 245 IFPIIEAAAQRAGIQYQKANASTQTSLKVIGDHTRAVVHLIADGVTASNVGRGYVLRRLI 304
Query: 349 RRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELR 408
RR VR RLLGI G P +A+ AI+L+ ++ +V+ R+ IL EL+REE +
Sbjct: 305 RRIVRHSRLLGIN--------GLVTPDLAQVAIDLAANVYPNVRERQAVILSELQREEEQ 356
Query: 409 FVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGV 468
F++TL+RGEKLL +ML+ + S P+L+G+DAF+L+DT+GFP+E+T+E+A E G+
Sbjct: 357 FLKTLDRGEKLLAEMLSPLKKAKGKKRSQPQLAGRDAFVLFDTYGFPLELTQEIAAEQGI 416
Query: 469 SVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLSAKAIVESL 527
VD+ F+ M QR++SQAAH + ++V + D L +++ T+F GY+ LS V ++
Sbjct: 417 GVDVAEFEACMAEQRQRSQAAHETIDVTVQEGIDSLGDQLHPTQFRGYEELSLTTTVTAI 476
Query: 528 LVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVKKS 587
LV G P + G++V+V+L TPFYAESGGQIGD G+L + A+V + DV+K
Sbjct: 477 LVAGHPATTATAGTEVQVILEATPFYAESGGQIGDRGYLASSD------ALVHIHDVQKQ 530
Query: 588 LGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQAG 647
+FVH G + G L+VG V A +D R+R + HHTATHLLQAALKK+I + SQAG
Sbjct: 531 -KELFVHYGKVERGSLKVGDRVSAQIDLSCRRRVQAHHTATHLLQAALKKLIDENISQAG 589
Query: 648 SLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAMFG 707
SLVAFDRLRFDFN RPL EL++IE IN WI +++ T +MAL +AK GAIAMFG
Sbjct: 590 SLVAFDRLRFDFNCPRPLTREELQQIEDQINAWISESHTTHTYIMALSEAKAKGAIAMFG 649
Query: 708 EKYGEQVKI 716
EKYGEQV++
Sbjct: 650 EKYGEQVRV 658
>gi|22299646|ref|NP_682893.1| alanyl-tRNA synthetase [Thermosynechococcus elongatus BP-1]
gi|22295830|dbj|BAC09655.1| alanyl-tRNA synthetase [Thermosynechococcus elongatus BP-1]
Length = 891
Score = 786 bits (2031), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/669 (56%), Positives = 503/669 (75%), Gaps = 16/669 (2%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
+GD IR++FLDFYA++GH +LPSASL+P+DPTVLLTIAGML FKPIFLG+ +VPRA T
Sbjct: 14 TGDQIRQKFLDFYAAKGHTILPSASLIPDDPTVLLTIAGMLPFKPIFLGQEAPKVPRATT 73
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
+Q+C+RTND+ENVGRT+RHHTFFEMLGNFSFGDYFK EAI WAWE T +GLP RL +
Sbjct: 74 AQKCLRTNDIENVGRTARHHTFFEMLGNFSFGDYFKGEAIAWAWELMTTVYGLPPERLLV 133
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
SV+E+DDEA++IW+++VG+P E I+RMG + NFW +G TGPCGPCSEIYYDF+P++G ++
Sbjct: 134 SVFENDDEAYDIWHRQVGLPKERIQRMGEESNFWTAGPTGPCGPCSEIYYDFYPEKGLAN 193
Query: 229 VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDL 288
VDL DD RFIE YNLVFM+ N+ D G PLK KNIDTG+GLER+A++LQ VPNNYETDL
Sbjct: 194 VDLDDDGRFIELYNLVFMELNQDDQGHRTPLKAKNIDTGMGLERMAQVLQGVPNNYETDL 253
Query: 289 IFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLI 348
IFPII+ A++ A + Y ++N T +LK+IGDH RA+V+L++DGV SN+GRGYV+RRLI
Sbjct: 254 IFPIIEAAAQRAGIQYQKANASTQTSLKVIGDHTRAVVHLIADGVTASNVGRGYVLRRLI 313
Query: 349 RRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELR 408
RR VR RLLGI G P +A+ AI+L+ ++ +V+ R+ IL EL+REE +
Sbjct: 314 RRIVRHSRLLGIN--------GLVTPDLAQVAIDLAANVYPNVRERQAVILSELQREEEQ 365
Query: 409 FVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGV 468
F++TL+RGEKLL +ML+ + S P+L+G+DAF+L+DT+GFP+E+T+E+A E G+
Sbjct: 366 FLKTLDRGEKLLAEMLSPLKKAKGKKRSQPQLAGRDAFVLFDTYGFPLELTQEIAAEQGI 425
Query: 469 SVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLSAKAIVESL 527
VD+ F+ M QR++SQAAH + ++V + D L +++ T+F GY+ LS V ++
Sbjct: 426 GVDVAEFEACMAEQRQRSQAAHETIDVTVQEGIDSLGDQLHPTQFRGYEELSLTTTVTAI 485
Query: 528 LVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVKKS 587
LV G P + G++V+V+L TPFYAESGGQIGD G+L + A+V + DV+K
Sbjct: 486 LVAGHPATTATAGTEVQVILEATPFYAESGGQIGDRGYLASSD------ALVHIHDVQKQ 539
Query: 588 LGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQAG 647
+FVH G + G L+VG V A +D R+R + HHTATHLLQAALKK+I + SQAG
Sbjct: 540 -KELFVHYGKVERGSLKVGDRVSAQIDLSCRRRVQAHHTATHLLQAALKKLIDENISQAG 598
Query: 648 SLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAMFG 707
SLVAFDRLRFDFN RPL EL++IE IN WI +++ T +MAL +AK GAIAMFG
Sbjct: 599 SLVAFDRLRFDFNCPRPLTREELQQIEDQINAWISESHTTHTYIMALSEAKAKGAIAMFG 658
Query: 708 EKYGEQVKI 716
EKYGEQV++
Sbjct: 659 EKYGEQVRV 667
>gi|425467555|ref|ZP_18846835.1| Alanyl-tRNA synthetase [Microcystis aeruginosa PCC 9809]
gi|389829651|emb|CCI28862.1| Alanyl-tRNA synthetase [Microcystis aeruginosa PCC 9809]
Length = 874
Score = 786 bits (2029), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/669 (57%), Positives = 505/669 (75%), Gaps = 25/669 (3%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
SG IR+RFLDF+A+R HK+LPSASLVPEDPTVLLTIAGML FKPIFLG+ + PRA T
Sbjct: 6 SGSEIRQRFLDFFAARNHKILPSASLVPEDPTVLLTIAGMLPFKPIFLGQKTPEFPRATT 65
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
SQ+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFK++AI WAWE ST F LP RL +
Sbjct: 66 SQKCIRTNDIENVGRTARHHTFFEMLGNFSFGDYFKEQAIAWAWELSTEVFNLPPERLVV 125
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
SV+ +D+EAF IW ++G+P I++MG +DNFW SG TGPCGPCSEIYYDFHP+ G
Sbjct: 126 SVFREDEEAFAIWRDKIGIPAHRIQKMGEEDNFWVSGPTGPCGPCSEIYYDFHPELGDKT 185
Query: 229 VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDL 288
+DL DD+RFIEFYNLVFMQYN+ DG+L PL KNIDTG+GLER+A+ILQKV NNYETDL
Sbjct: 186 IDLEDDSRFIEFYNLVFMQYNRDADGNLTPLANKNIDTGMGLERMAQILQKVANNYETDL 245
Query: 289 IFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLI 348
IFPI+ +A+ LA + Y +++++T ++LK+IGDH+R++V++++DG+ SN RGYV+RRLI
Sbjct: 246 IFPIVAEAARLAAIDYQKADEKTKVSLKVIGDHVRSVVHMIADGISASNTDRGYVLRRLI 305
Query: 349 RRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELR 408
RR VR GRL+GI EG F+ +AE AI LS + +V+ RE I EL+REE R
Sbjct: 306 RRVVRHGRLIGI--------EGQFITKVAEVAIALSESVYGNVRERETVIKAELEREEAR 357
Query: 409 FVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGV 468
F++TLERGEKLL+ +L S ++SG DAF LYDT+GFP+E+T+E+AEE G+
Sbjct: 358 FLETLERGEKLLESILEKEKS---------QISGVDAFTLYDTYGFPLELTQEIAEEQGL 408
Query: 469 SVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLSAKAIVESL 527
SVD GF+ EM+ Q+++S+AAH + L+V S D LAE I TEFLGY L A A V ++
Sbjct: 409 SVDTAGFEQEMKKQQQRSKAAHETIDLTVQGSLDKLAEHIHPTEFLGYTDLQATATVTAV 468
Query: 528 LVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVKKS 587
LV GK V + G++V+V+L++TPFYAESGGQIGD G+L G N ++ ++DV+K
Sbjct: 469 LVAGKTVESAAAGTEVQVVLDKTPFYAESGGQIGDKGYL---TGDN---LLIRIEDVQKE 522
Query: 588 LGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQAG 647
G +F+H G I G++ G + A +D R+RA+ +HTATHLLQ+ALKK++ SQAG
Sbjct: 523 SG-IFIHFGRIERGIVTTGDTINAQIDRSCRRRAQANHTATHLLQSALKKLVDGGISQAG 581
Query: 648 SLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAMFG 707
SLV+F+RLRFDFN RPL EL+++E IN WI +A+ Q VM L++AK+ GAIAMFG
Sbjct: 582 SLVSFERLRFDFNCPRPLTSAELQQVEEQINTWIAEAHDTQIAVMGLEEAKQKGAIAMFG 641
Query: 708 EKYGEQVKI 716
EKYG +V++
Sbjct: 642 EKYGSEVRV 650
>gi|422301547|ref|ZP_16388914.1| Alanyl-tRNA synthetase [Microcystis aeruginosa PCC 9806]
gi|389789462|emb|CCI14537.1| Alanyl-tRNA synthetase [Microcystis aeruginosa PCC 9806]
Length = 874
Score = 786 bits (2029), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/669 (57%), Positives = 506/669 (75%), Gaps = 25/669 (3%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
SG IR+RFLDF+A+R HK+LPSASLVPEDPTVLLTIAGML FKPIFLG+ + PRA T
Sbjct: 6 SGSEIRQRFLDFFAARNHKILPSASLVPEDPTVLLTIAGMLPFKPIFLGQKTPEFPRATT 65
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
SQ+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFK++AI WAWE ST F LP RL +
Sbjct: 66 SQKCIRTNDIENVGRTARHHTFFEMLGNFSFGDYFKEQAIAWAWELSTEVFNLPPERLVV 125
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
SV+++D+EAF IW ++G+P I++MG DNFW SG TGPCGPCSEIYYDFHP+ G
Sbjct: 126 SVFKEDEEAFAIWRDKIGIPAHRIQKMGEADNFWVSGPTGPCGPCSEIYYDFHPELGDKT 185
Query: 229 VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDL 288
+DL DD+RFIEFYNLVFMQYN+ DG+L PL KNIDTG+GLER+A+ILQKV NNYETDL
Sbjct: 186 IDLEDDSRFIEFYNLVFMQYNRDADGNLTPLANKNIDTGMGLERMAQILQKVANNYETDL 245
Query: 289 IFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLI 348
IFPI+ +A+ LA + Y +++++T ++LK+IGDH+R++V++++DG+ SN RGYV+RRLI
Sbjct: 246 IFPIVAEAARLAAIDYQKADEKTKVSLKVIGDHVRSVVHMIADGISASNTDRGYVLRRLI 305
Query: 349 RRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELR 408
RR VR GRL+GI EG F+ +AE AI LS + +V+ RE I EL+REE R
Sbjct: 306 RRVVRHGRLIGI--------EGQFITKVAEVAIALSESVYGNVRERETVIKAELEREEAR 357
Query: 409 FVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGV 468
F++TLERGEKLL+ +L S ++SG DAF LYDT+GFP+E+T+E+AEE G+
Sbjct: 358 FLETLERGEKLLESILEKEKS---------QISGVDAFTLYDTYGFPLELTQEIAEEQGL 408
Query: 469 SVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLSAKAIVESL 527
SVD GF+ EM+ Q+++S+AAH + L+V S D LAE I TEFLGY L A A V ++
Sbjct: 409 SVDTAGFEQEMKKQQQRSKAAHETIDLTVQGSLDKLAEHIHPTEFLGYTDLQATATVTAV 468
Query: 528 LVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVKKS 587
LV GK V + G++V+V+L++TPFYAESGGQIGD G+L G N ++ V+DV+K
Sbjct: 469 LVAGKTVESAAAGTEVQVVLDKTPFYAESGGQIGDKGYL---TGDN---LLIRVEDVQKE 522
Query: 588 LGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQAG 647
G +F+H G I G++ G + A +D R+RA+ +HTATHLLQ+ALKK++ SQAG
Sbjct: 523 SG-IFIHFGRIERGIVTTGDTINAQIDRSCRRRAQANHTATHLLQSALKKLVDGGISQAG 581
Query: 648 SLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAMFG 707
SLV+F+RLRFDFN RPL +EL+++E IN WI +A+ + VM L++AK+ GAIAMFG
Sbjct: 582 SLVSFERLRFDFNCPRPLTSSELQQVEEQINTWIAEAHDTEIAVMGLEEAKQKGAIAMFG 641
Query: 708 EKYGEQVKI 716
EKYG +V++
Sbjct: 642 EKYGSEVRV 650
>gi|425451390|ref|ZP_18831211.1| Alanyl-tRNA synthetase [Microcystis aeruginosa PCC 7941]
gi|389767326|emb|CCI07234.1| Alanyl-tRNA synthetase [Microcystis aeruginosa PCC 7941]
Length = 874
Score = 785 bits (2028), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/669 (57%), Positives = 505/669 (75%), Gaps = 25/669 (3%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
SG IR+RFLDF+A+R HK+LPSASLVPEDPTVLLTIAGML FKPIFLG+ + PRA T
Sbjct: 6 SGSEIRQRFLDFFAARNHKILPSASLVPEDPTVLLTIAGMLPFKPIFLGQKTPEFPRATT 65
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
SQ+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFK++AI WAWE ST F LP RL +
Sbjct: 66 SQKCIRTNDIENVGRTARHHTFFEMLGNFSFGDYFKEQAIAWAWELSTEVFNLPPERLVV 125
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
SV+++D+EAF IW ++G+P I++MG DNFW SG TGPCGPCSEIYYDFHP+ G
Sbjct: 126 SVFKEDEEAFAIWRDKIGIPAHRIQKMGEADNFWVSGPTGPCGPCSEIYYDFHPELGDKT 185
Query: 229 VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDL 288
+DL DD+RFIEFYNLVFMQYN+ DG+L PL KNIDTG+GLER+A+ILQKV NNYETDL
Sbjct: 186 IDLEDDSRFIEFYNLVFMQYNRDADGNLTPLANKNIDTGMGLERMAQILQKVANNYETDL 245
Query: 289 IFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLI 348
IFPI+ +A+ LA + Y +++++T ++LK+IGDH+R++V++++DG+ SN RGYV+RRLI
Sbjct: 246 IFPIVAEAARLAAIDYQKADEKTKVSLKVIGDHVRSVVHMIADGISASNTDRGYVLRRLI 305
Query: 349 RRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELR 408
RR VR GRL+GI EG F+ +AE AI LS + +V+ RE I EL+REE R
Sbjct: 306 RRVVRHGRLIGI--------EGQFITKVAEVAIALSESVYGNVRERETVIKAELEREEAR 357
Query: 409 FVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGV 468
F++TLERGEKLL+ +L S ++SG DAF LYDT+GFP+E+T+E+AEE G+
Sbjct: 358 FLETLERGEKLLESILEKEKS---------QISGVDAFTLYDTYGFPLELTQEIAEEQGL 408
Query: 469 SVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLSAKAIVESL 527
SVD GF+ EM+ Q+++S+AAH + L+V S D LAE I TEFLGY L A A V ++
Sbjct: 409 SVDTAGFEQEMKKQQQRSKAAHETIDLTVQGSLDKLAEHIHPTEFLGYTDLQATATVTAV 468
Query: 528 LVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVKKS 587
LV GK V + G++V+++L++TPFYAESGGQIGD G+L G N ++ V+DV+K
Sbjct: 469 LVAGKTVESAAAGTEVQIVLDKTPFYAESGGQIGDKGYL---TGDN---LLIRVEDVQKE 522
Query: 588 LGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQAG 647
G +F+H G I G++ G + A +D R+RA+ +HTATHLLQ+ALKK++ SQAG
Sbjct: 523 SG-IFIHFGRIERGIVTTGDTINAQIDRSCRRRAQANHTATHLLQSALKKLVDGGISQAG 581
Query: 648 SLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAMFG 707
SLV+F+RLRFDFN RPL EL+++E IN WI +A+ Q VM L++AK+ GAIAMFG
Sbjct: 582 SLVSFERLRFDFNCPRPLTGAELQQVEEQINTWIAEAHDTQIAVMGLEEAKQKGAIAMFG 641
Query: 708 EKYGEQVKI 716
EKYG +V++
Sbjct: 642 EKYGSEVRV 650
>gi|425471605|ref|ZP_18850457.1| Alanyl-tRNA synthetase [Microcystis aeruginosa PCC 9701]
gi|389882475|emb|CCI37051.1| Alanyl-tRNA synthetase [Microcystis aeruginosa PCC 9701]
Length = 874
Score = 785 bits (2027), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/669 (57%), Positives = 506/669 (75%), Gaps = 25/669 (3%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
SG IR+RFLDF+A+R HK+LPSASLVPEDPTVLLTIAGML FKPIFLG+ + PRA T
Sbjct: 6 SGSEIRQRFLDFFAARNHKILPSASLVPEDPTVLLTIAGMLPFKPIFLGQKTPEFPRATT 65
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
SQ+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFK++AI WAWE ST F LP RL +
Sbjct: 66 SQKCIRTNDIENVGRTARHHTFFEMLGNFSFGDYFKEQAIAWAWELSTEVFNLPPERLVV 125
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
SV+++D+EAF IW ++G+P I++MG DNFW SG TGPCGPCSEIYYDFHP+ G
Sbjct: 126 SVFKEDEEAFAIWRDKIGIPAHRIQKMGEADNFWVSGPTGPCGPCSEIYYDFHPELGDKT 185
Query: 229 VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDL 288
+DL DD+RFIEFYNLVFMQYN+ DG+L PL KNIDTG+GLER+A+ILQKV NNYETDL
Sbjct: 186 IDLEDDSRFIEFYNLVFMQYNRDADGNLTPLANKNIDTGMGLERMAQILQKVANNYETDL 245
Query: 289 IFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLI 348
IFPI+ +A+ LA + Y +++++T ++LK+IGDH+R++V++++DG+ SN RGYV+RRLI
Sbjct: 246 IFPIVAEAARLAAIDYQKADEKTKVSLKVIGDHVRSVVHMIADGISASNTDRGYVLRRLI 305
Query: 349 RRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELR 408
RR VR GRL+GI EG F+ +AE AI LS + +V+ RE I EL+REE R
Sbjct: 306 RRVVRHGRLIGI--------EGQFITKVAEVAIALSESVYGNVRERETVIKAELEREEAR 357
Query: 409 FVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGV 468
F++TLERGEKLL+ +L S ++SG DAF LYDT+GFP+E+T+E+AEE G+
Sbjct: 358 FLETLERGEKLLESILEKEKS---------QISGVDAFTLYDTYGFPLELTQEIAEEQGL 408
Query: 469 SVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLSAKAIVESL 527
SVD GF+ EM+ Q+++S+AAH + L+V S D LAE I TEFLGY L A A V ++
Sbjct: 409 SVDTAGFEQEMKKQQQRSKAAHETIDLTVQGSLDKLAEHIHPTEFLGYTDLQATATVTAV 468
Query: 528 LVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVKKS 587
LV GK V + G++V+V+L++TPFYAESGGQIGD G+L G N ++ V+DV+K
Sbjct: 469 LVAGKTVESAAAGTEVQVVLDQTPFYAESGGQIGDKGYL---TGDN---LLIRVEDVQKE 522
Query: 588 LGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQAG 647
G +F+H G I G++ G + A +D R+RA+ +HTATHLLQ+ALKK++ SQAG
Sbjct: 523 SG-IFIHFGRIERGIVTTGDTINAQIDRSCRRRAQANHTATHLLQSALKKLVDGGISQAG 581
Query: 648 SLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAMFG 707
SLV+F+RLRFDFN RPL +EL+++E IN WI +A+ + VM L++AK+ GAIAMFG
Sbjct: 582 SLVSFERLRFDFNCPRPLTSSELQQVEEQINTWIAEAHDTEIAVMGLEEAKQKGAIAMFG 641
Query: 708 EKYGEQVKI 716
EKYG +V++
Sbjct: 642 EKYGSEVRV 650
>gi|428224529|ref|YP_007108626.1| alanyl-tRNA synthetase [Geitlerinema sp. PCC 7407]
gi|427984430|gb|AFY65574.1| alanyl-tRNA synthetase [Geitlerinema sp. PCC 7407]
Length = 873
Score = 785 bits (2027), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/669 (59%), Positives = 506/669 (75%), Gaps = 25/669 (3%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
SG IR++FLDF+A+RGH+ LPSASLVPEDPTVLLTIAGML FKPIFLG+ PRA T
Sbjct: 6 SGAQIRQKFLDFFAARGHQPLPSASLVPEDPTVLLTIAGMLPFKPIFLGQRSPDFPRATT 65
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
SQ+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFK++AI WAWE ST GLP RL +
Sbjct: 66 SQKCIRTNDIENVGRTARHHTFFEMLGNFSFGDYFKEQAIAWAWELSTEVLGLPPERLVV 125
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
SV+E+DDEAF IW +VG+P I+RMGADDNFW SG TGPCGPCSE+YYDFHP+RG +
Sbjct: 126 SVFEEDDEAFAIWRDQVGIPAHRIQRMGADDNFWVSGPTGPCGPCSELYYDFHPERGDAH 185
Query: 229 VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDL 288
+DL DD+RFIEFYNLVFMQYN+ +G+L PL+ KNIDTG+GLER+A+ILQ+VPNNYETDL
Sbjct: 186 IDLEDDSRFIEFYNLVFMQYNRDAEGNLTPLQNKNIDTGMGLERMAQILQQVPNNYETDL 245
Query: 289 IFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLI 348
IFPIIK A+E+A + YAQ+++ T ++LK+IGDH+R++V++++DG+ SN+GRGY++RRLI
Sbjct: 246 IFPIIKTAAEVAGIDYAQADEGTKVSLKVIGDHVRSVVHMIADGIAASNMGRGYILRRLI 305
Query: 349 RRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELR 408
RR VR GRL+GI EG F +AE AI L + +V+ +E I EL+REE +
Sbjct: 306 RRVVRHGRLIGI--------EGEFTTKVAETAIALGEDVYPNVRQKENAIKAELQREEAQ 357
Query: 409 FVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGV 468
F++TL+RGEKLL ++L RE+ ++SG+DAF LYDT+GFPVE+T+E+A E +
Sbjct: 358 FLKTLDRGEKLLAEIL------ERET---QQISGEDAFKLYDTYGFPVELTQEIAAEKNL 408
Query: 469 SVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLSAKAIVESL 527
+VD+ GF++EME QR +S+ AH + L+V S D LAE I TEFLGY +A A V L
Sbjct: 409 TVDLAGFEVEMEKQRDRSRDAHETIDLTVQGSLDTLAEHIHATEFLGYTEFAATAQVAVL 468
Query: 528 LVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVKKS 587
LV GK V G++V+++LN+TPFYAESGGQIGD G+L Q +V V+DVKK
Sbjct: 469 LVQGKSVEAAEAGTEVQIVLNQTPFYAESGGQIGDRGYLSGDQ------VLVRVEDVKKE 522
Query: 588 LGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQAG 647
FVH G I G L+VG V A +D R+RA+ +H+ATHLLQAALKK+I SQAG
Sbjct: 523 -SDFFVHFGRIERGTLQVGDSVTAQIDRACRRRAQANHSATHLLQAALKKIIDDSISQAG 581
Query: 648 SLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAMFG 707
SLV FDRLRFDFN RPL E++++E +N WI +A+ T V+ L +AK GA+AMFG
Sbjct: 582 SLVDFDRLRFDFNCPRPLTSEEVQQVEEQVNTWIAEAHSAHTAVLPLAEAKAKGAVAMFG 641
Query: 708 EKYGEQVKI 716
EKYG++V++
Sbjct: 642 EKYGDEVRV 650
>gi|425436678|ref|ZP_18817112.1| Alanyl-tRNA synthetase [Microcystis aeruginosa PCC 9432]
gi|389678547|emb|CCH92589.1| Alanyl-tRNA synthetase [Microcystis aeruginosa PCC 9432]
Length = 874
Score = 785 bits (2026), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/669 (57%), Positives = 506/669 (75%), Gaps = 25/669 (3%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
SG IR+RFLDF+A+R HK+LPSASLVPEDPTVLLTIAGML FKPIFLG+ + PRA T
Sbjct: 6 SGSEIRQRFLDFFAARNHKILPSASLVPEDPTVLLTIAGMLPFKPIFLGQKTPEFPRATT 65
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
SQ+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFK++AI WAWE ST F LP RL +
Sbjct: 66 SQKCIRTNDIENVGRTARHHTFFEMLGNFSFGDYFKEQAIAWAWELSTEVFNLPPERLVV 125
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
SV+++D+EAF IW ++G+P I++MG DNFW SG TGPCGPCSEIYYDFHP+ G
Sbjct: 126 SVFKEDEEAFAIWRDKIGIPAHRIQKMGEADNFWVSGPTGPCGPCSEIYYDFHPELGDKT 185
Query: 229 VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDL 288
+DL DD+RFIEFYNLVFMQYN+ DG+L PL KNIDTG+GLER+A+ILQKV NNYETDL
Sbjct: 186 IDLEDDSRFIEFYNLVFMQYNRDADGNLTPLANKNIDTGMGLERMAQILQKVANNYETDL 245
Query: 289 IFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLI 348
IFPI+ +A+ LA + Y +++++T ++LK+IGDH+R++V++++DG+ SN RGYV+RRLI
Sbjct: 246 IFPIVAEAARLAAIDYQKADEKTKVSLKVIGDHVRSVVHMIADGISASNTDRGYVLRRLI 305
Query: 349 RRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELR 408
RR VR GRL+GI EG F+ +AE AI LS + +V+ RE I EL+REE R
Sbjct: 306 RRVVRHGRLIGI--------EGQFITKVAEVAIALSESVYGNVRERETVIKAELEREEAR 357
Query: 409 FVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGV 468
F++TLERGEKLL+ +L S ++SG DAF LYDT+GFP+E+T+E+AEE G+
Sbjct: 358 FLETLERGEKLLESILEKEKS---------QISGVDAFTLYDTYGFPLELTQEIAEEQGL 408
Query: 469 SVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLSAKAIVESL 527
SVD GF+ EM+ Q+++S+AAH + L+V S D LAE I TEFLGY L A A V ++
Sbjct: 409 SVDTAGFEQEMKKQQQRSKAAHETIDLTVQGSLDKLAEHIHPTEFLGYTDLQATATVTAV 468
Query: 528 LVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVKKS 587
LV GK V + G++V+V+L++TPFYAESGGQIGD G+L G N ++ V+DV+K
Sbjct: 469 LVAGKTVESAAAGTEVQVVLDQTPFYAESGGQIGDKGYL---TGDN---LLIRVEDVQKE 522
Query: 588 LGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQAG 647
G +F+H G + G++ G + A +D R+RA+ +HTATHLLQ+ALKK++ SQAG
Sbjct: 523 SG-IFIHFGRVERGIVTTGDTINAQIDRSCRRRAQANHTATHLLQSALKKLVDGGISQAG 581
Query: 648 SLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAMFG 707
SLV+F+RLRFDFN RPL +EL+++E IN WI +A+ + VM L++AK+ GAIAMFG
Sbjct: 582 SLVSFERLRFDFNCPRPLTSSELQQVEEQINTWIAEAHDTEIAVMGLEEAKQKGAIAMFG 641
Query: 708 EKYGEQVKI 716
EKYG +V++
Sbjct: 642 EKYGSEVRV 650
>gi|428773926|ref|YP_007165714.1| alanyl-tRNA synthetase [Cyanobacterium stanieri PCC 7202]
gi|428688205|gb|AFZ48065.1| alanyl-tRNA synthetase [Cyanobacterium stanieri PCC 7202]
Length = 881
Score = 784 bits (2025), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/672 (57%), Positives = 505/672 (75%), Gaps = 22/672 (3%)
Query: 47 PS-SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPR 105
PS +G+ IR +FL+F+ + HK+LPSASLVP+DPTVLLTIAGML FKPIFLG+ +VPR
Sbjct: 6 PSLTGNEIRAKFLNFFEQKQHKILPSASLVPDDPTVLLTIAGMLPFKPIFLGQQTPEVPR 65
Query: 106 AATSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANR 165
A TSQ+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFK +AI W WE ST F LP R
Sbjct: 66 ATTSQKCIRTNDIENVGRTARHHTFFEMLGNFSFGDYFKSQAIAWGWELSTEVFKLPPER 125
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRG 225
+ +SV+ +DDEAF IW EVGVP + I RMG +DNFW SGATGPCGPCSE+YYDF P+ G
Sbjct: 126 IVVSVFREDDEAFAIWRDEVGVPEKRIIRMGEEDNFWKSGATGPCGPCSELYYDFKPELG 185
Query: 226 CSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYE 285
+DL DD+RFIEFYNLVFMQYN+ DG+L PL++KNIDTG+GLER+A+ILQ+VPNNYE
Sbjct: 186 DDHIDLEDDSRFIEFYNLVFMQYNRDADGNLTPLEKKNIDTGMGLERMAQILQQVPNNYE 245
Query: 286 TDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVR 345
TDLIFPIIK A+ELA++ Y ++++ T ++LK+IGDH+R++V +++DG+ SN+GRGY++R
Sbjct: 246 TDLIFPIIKTAAELADIDYQRADENTKVSLKVIGDHVRSVVQMIADGISASNMGRGYILR 305
Query: 346 RLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKRE 405
RLIRR VR GRL+GI G+ F+ +AE AIEL + + + REQ I EL+RE
Sbjct: 306 RLIRRVVRHGRLIGIDGN--------FINEVAETAIELLEGVYVNTREREQVIKTELQRE 357
Query: 406 ELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEE 465
E F+ TLERGEKL LA+ +++ + +SG DAF LYDTFGFP+E+T+E+AEE
Sbjct: 358 ESAFLATLERGEKL----LAEVINKLKVEAKT-EISGVDAFTLYDTFGFPLELTQEIAEE 412
Query: 466 HGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLSAKAIV 524
G++VD+ GF+ EME QR +SQ+AH + L+V S D LAE I TEFLGY + +
Sbjct: 413 QGITVDVAGFEAEMEAQRVRSQSAHETIDLTVQGSIDKLAEHIHPTEFLGYHEYQLISHI 472
Query: 525 ESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDV 584
E LLV GK V K G+ V+++LN+TPFYAESGGQIGD G+L + ++ + DV
Sbjct: 473 EGLLVEGKSVEKAESGTKVQLILNKTPFYAESGGQIGDKGYLA------GEDVLISINDV 526
Query: 585 KKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETS 644
+K G FVH GT+ GV+ VG+++ A VD R R + +HTATHLLQ+ALKKV+ S
Sbjct: 527 QKESG-FFVHYGTVERGVITVGQKLRATVDKACRNRVRANHTATHLLQSALKKVVDNSIS 585
Query: 645 QAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIA 704
QAGSLV+FD+LRFDFN +P+ ++L++IE LIN WI +A+ VM+L++AK GAIA
Sbjct: 586 QAGSLVSFDKLRFDFNSPQPITKSQLQQIEDLINTWIAEAHPADISVMSLEEAKGKGAIA 645
Query: 705 MFGEKYGEQVKI 716
MFGEKYG QV++
Sbjct: 646 MFGEKYGSQVRV 657
>gi|425438801|ref|ZP_18819143.1| Alanyl-tRNA synthetase [Microcystis aeruginosa PCC 9717]
gi|389717806|emb|CCH98147.1| Alanyl-tRNA synthetase [Microcystis aeruginosa PCC 9717]
Length = 874
Score = 784 bits (2024), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/669 (58%), Positives = 502/669 (75%), Gaps = 25/669 (3%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
SG IR+RFLDF+A+R HK+LPSASLVPEDPTVLLTIAGML FKPIFLG+ + RA T
Sbjct: 6 SGSEIRQRFLDFFAARNHKILPSASLVPEDPTVLLTIAGMLPFKPIFLGQKTPEFTRATT 65
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
SQ+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFK++AI WAWE ST F LP RL +
Sbjct: 66 SQKCIRTNDIENVGRTARHHTFFEMLGNFSFGDYFKEQAIAWAWELSTEVFNLPPERLVV 125
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
SV+ +D+EAF IW ++G+P I++MG DNFW SG TGPCGPCSEIYYDFHP+ G
Sbjct: 126 SVFREDEEAFAIWRDKIGIPAHRIQKMGEADNFWVSGPTGPCGPCSEIYYDFHPELGDKT 185
Query: 229 VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDL 288
+DL DD+RFIEFYNLVFMQYN+ DG+L PL KNIDTG+GLER+A+ILQKV NNYETDL
Sbjct: 186 IDLEDDSRFIEFYNLVFMQYNRDADGNLTPLANKNIDTGMGLERMAQILQKVANNYETDL 245
Query: 289 IFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLI 348
IFPI+ +A+ LA + Y +++++T ++LK+IGDH+R++V++++DG+ SN RGYV+RRLI
Sbjct: 246 IFPIVAEAARLAAIDYQKADEKTKVSLKVIGDHVRSVVHMIADGISASNTDRGYVLRRLI 305
Query: 349 RRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELR 408
RR VR GRL+GI EG F+ +AE AI LS + +V+ RE I EL+REE R
Sbjct: 306 RRVVRHGRLIGI--------EGQFITKVAEVAIALSESVYGNVRERETVIKAELEREEAR 357
Query: 409 FVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGV 468
F++TLERGEKLL+ +L S ++SG DAF LYDT+GFP+E+T+E+AEE G+
Sbjct: 358 FLETLERGEKLLESILEKEKS---------QISGVDAFTLYDTYGFPLELTQEIAEEQGL 408
Query: 469 SVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLSAKAIVESL 527
SVD GF+ EM+ Q+++S+AAH + L+V S D LAE I TEFLGY L A A V ++
Sbjct: 409 SVDTAGFEQEMKKQQQRSKAAHETIDLTVQGSLDKLAEHIHPTEFLGYTDLQATATVTTV 468
Query: 528 LVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVKKS 587
LV GK V + G++V+V+L++TPFYAESGGQIGD G+L G N V+ V+DV+K
Sbjct: 469 LVAGKTVESAAAGTEVQVVLDQTPFYAESGGQIGDKGYL---TGDN---LVIRVEDVQKE 522
Query: 588 LGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQAG 647
G +F+H G I G++ G + A +D R+RA+ +HTATHLLQ+ALKK++ SQAG
Sbjct: 523 SG-IFIHFGRIERGIVTTGDTINAQIDRSCRRRAQANHTATHLLQSALKKLVDGGISQAG 581
Query: 648 SLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAMFG 707
SLV FDRLRFDFN RPL EL+++E IN WI +A+ Q VM L++AK+ GAIAMFG
Sbjct: 582 SLVNFDRLRFDFNCPRPLTSAELQQVEEQINTWIAEAHDTQIAVMGLEEAKQKGAIAMFG 641
Query: 708 EKYGEQVKI 716
EKYG +V++
Sbjct: 642 EKYGSEVRV 650
>gi|354565737|ref|ZP_08984911.1| alanyl-tRNA synthetase [Fischerella sp. JSC-11]
gi|353548610|gb|EHC18055.1| alanyl-tRNA synthetase [Fischerella sp. JSC-11]
Length = 887
Score = 784 bits (2024), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/670 (58%), Positives = 507/670 (75%), Gaps = 17/670 (2%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
SG+ IR FLDFYA RGH++LPSASLVPEDPTVLLTIAGML FKPIFLG+ + RA T
Sbjct: 9 SGNEIRALFLDFYAQRGHQILPSASLVPEDPTVLLTIAGMLPFKPIFLGQRTPEFKRATT 68
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
SQ+CIRTND+ENVGRT RHHTFFEMLGNFSFGDYFK++AI W WE ST F LP RL +
Sbjct: 69 SQKCIRTNDIENVGRTKRHHTFFEMLGNFSFGDYFKEQAIAWGWEISTTVFKLPPERLVV 128
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
SVYE+DDEA+ IW ++GVP + IKRMGA+DNFW SG TGPCGPCSEIYYDFHP++G +
Sbjct: 129 SVYEEDDEAYAIWRDKIGVPEKRIKRMGAEDNFWASGPTGPCGPCSEIYYDFHPEQGNDN 188
Query: 229 VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDL 288
+DL DDTRFIEFYNLVFMQYN+ +G+L PL KNIDTG+GLER+A+ILQ VPNNYETDL
Sbjct: 189 IDLEDDTRFIEFYNLVFMQYNRDAEGNLTPLANKNIDTGMGLERMAQILQSVPNNYETDL 248
Query: 289 IFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLI 348
IFPIIKKA+E+A + Y +S+++ ++LKIIGDH RA+V++++D + SN+GRGYV+RRLI
Sbjct: 249 IFPIIKKAAEIAGIDYHKSDEKNQVSLKIIGDHTRAVVHMIADEIRASNVGRGYVLRRLI 308
Query: 349 RRAVRTGRLLGI-KGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREEL 407
RR VR GRL+GI + D N+ F P +AE AI L+ +++ RE I EL+REE
Sbjct: 309 RRLVRHGRLIGIYRKDVTCNV---FTPQVAEVAISLAEDAYPNLRQRENSIKAELQREES 365
Query: 408 RFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHG 467
RF+QTLERGEKLL++++A + ++ G +++G+DAF L+DT+GFP+E+T+E+A+E+
Sbjct: 366 RFLQTLERGEKLLEEIIA----QVKQQGKT-QINGEDAFTLFDTYGFPLELTQEIAQENN 420
Query: 468 VSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLSAKAIVES 526
+++D+ GFD EME QR++++ AH + L+V S D LAE I TEFLGY +A A VE+
Sbjct: 421 LTIDVAGFDAEMEKQRQRARKAHETIDLTVQGSLDKLAEHIHATEFLGYAQPTATAKVEA 480
Query: 527 LLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVKK 586
+LVNG + G+DV+++L++TPFYAESGGQIGD G+L + + VV + DVKK
Sbjct: 481 ILVNGIAEEEAEAGTDVQIVLDKTPFYAESGGQIGDKGYL------SGEGVVVTINDVKK 534
Query: 587 SLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQA 646
VH G I G L VG V A +D R+RA+ +HTATHLLQAALKK++ SQA
Sbjct: 535 E-SDFHVHFGRIERGTLRVGDTVSAQIDRACRRRAQANHTATHLLQAALKKIVDDSISQA 593
Query: 647 GSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAMF 706
GSLV FDRLRFDFN R L E+++IE +N WI +A+ + ++ + +AK GAIAMF
Sbjct: 594 GSLVDFDRLRFDFNCPRALTAEEIQQIEEQVNTWIAEAHSAKVAILPIAEAKAKGAIAMF 653
Query: 707 GEKYGEQVKI 716
GEKYG++V++
Sbjct: 654 GEKYGDEVRV 663
>gi|218437893|ref|YP_002376222.1| alanyl-tRNA synthetase [Cyanothece sp. PCC 7424]
gi|218170621|gb|ACK69354.1| alanyl-tRNA synthetase [Cyanothece sp. PCC 7424]
Length = 881
Score = 784 bits (2024), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/669 (57%), Positives = 502/669 (75%), Gaps = 21/669 (3%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
SG IR FLDF+A H++LPSASLVPEDPTVLLTIAGML FKPIFLG+ PRA T
Sbjct: 9 SGSEIRSYFLDFFAKNQHQILPSASLVPEDPTVLLTIAGMLPFKPIFLGQQKPDYPRATT 68
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
SQ+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFK++AI+WAWE ST F LP +++ +
Sbjct: 69 SQKCIRTNDIENVGRTARHHTFFEMLGNFSFGDYFKEQAIKWAWELSTKVFKLPPDQIVV 128
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
SV+E+DDEAFEIW ++ +P + IKRMG DNFW +G TGPCGPCSE+YYDFHP+ G
Sbjct: 129 SVFEEDDEAFEIWRDKINIPPQRIKRMGKKDNFWQAGPTGPCGPCSELYYDFHPELGDKT 188
Query: 229 VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDL 288
+DL DD+RFIEFYNLVFMQYN+ +G+L PL+ KNIDTG+GLER+A+ILQKVPNNYETDL
Sbjct: 189 IDLEDDSRFIEFYNLVFMQYNQDAEGNLTPLQNKNIDTGMGLERMAQILQKVPNNYETDL 248
Query: 289 IFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLI 348
IFPII+ A+++A + Y +++++T ++LK+IGDH+RA+V++++DG+ SN GRGYV+RRLI
Sbjct: 249 IFPIIQAAADIAKIEYKKADEKTKVSLKVIGDHVRAVVHMIADGITASNTGRGYVLRRLI 308
Query: 349 RRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELR 408
RR VR GRL+GI EGAF+ +AE AI LS +V+ RE I EL REE
Sbjct: 309 RRVVRHGRLIGI--------EGAFINQVAEVAIALSETAYPNVRQRETPIKGELDREEAA 360
Query: 409 FVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGV 468
F+ TLERGEKLL +++A ++ ++SG DAF LYDT+GFP+E+T+E+AEE G+
Sbjct: 361 FLTTLERGEKLLSEIIAKVKKSKKK-----QISGVDAFKLYDTYGFPLELTQEIAEEEGL 415
Query: 469 SVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLSAKAIVESL 527
+V+++ FD EM+ Q+ QS+AAH + L+V S D LAE I TEFLGY + A VE +
Sbjct: 416 TVNVEEFDEEMKKQQDQSKAAHETIDLTVQGSLDKLAEHIHPTEFLGYTDAQSVAHVEVV 475
Query: 528 LVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVKKS 587
LV+GK V G++V+++LN+TPFYAESGGQIGD G+L +T VV V+DV+K
Sbjct: 476 LVDGKTVDSAEAGTEVQIVLNQTPFYAESGGQIGDKGYL------TGETLVVRVEDVQKE 529
Query: 588 LGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQAG 647
+ FVH G + G + VG V A +D R+R + HHTATHLLQAALKK++ SQAG
Sbjct: 530 -SAFFVHFGRVERGTITVGDSVTATIDRACRRRVQAHHTATHLLQAALKKIVDDSVSQAG 588
Query: 648 SLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAMFG 707
SLV FDRLRFDFN RP+ EL++IE LIN WI +A+ +MAL++AK GA+AMFG
Sbjct: 589 SLVTFDRLRFDFNCPRPVTPEELQQIEDLINNWIAEAHEAHVSIMALEEAKAKGAVAMFG 648
Query: 708 EKYGEQVKI 716
EKYG +V++
Sbjct: 649 EKYGAEVRV 657
>gi|440754375|ref|ZP_20933577.1| alanyl-tRNA synthetase [Microcystis aeruginosa TAIHU98]
gi|440174581|gb|ELP53950.1| alanyl-tRNA synthetase [Microcystis aeruginosa TAIHU98]
Length = 874
Score = 783 bits (2023), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/669 (57%), Positives = 505/669 (75%), Gaps = 25/669 (3%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
SG IR+RFLDF+A+R HK+LPSASLVPEDPTVLLTIAGML FKPIFLG+ + PRA T
Sbjct: 6 SGSEIRQRFLDFFAARNHKILPSASLVPEDPTVLLTIAGMLPFKPIFLGQKTPEFPRATT 65
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
SQ+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFK++AI WAWE ST F LP RL +
Sbjct: 66 SQKCIRTNDIENVGRTARHHTFFEMLGNFSFGDYFKEQAIAWAWELSTEVFNLPPERLVV 125
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
SV+++D+EAF IW ++G+P I++MG DNFW SG TGPCGPCSEIYYDFHP+ G
Sbjct: 126 SVFKEDEEAFAIWRDKIGIPAHRIQKMGEADNFWVSGPTGPCGPCSEIYYDFHPELGDKT 185
Query: 229 VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDL 288
+DL DD+RFIEFYNLVFMQYN+ DG+L PL KNIDTG+GLER+A+ILQKV NNYETDL
Sbjct: 186 IDLEDDSRFIEFYNLVFMQYNRDADGNLTPLANKNIDTGMGLERMAQILQKVANNYETDL 245
Query: 289 IFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLI 348
IFPI+ +A+ LA + Y +++++T ++LK+IGDH+R++V++++DG+ SN RGYV+RRLI
Sbjct: 246 IFPIVAEAARLAAIDYQKADEKTKVSLKVIGDHVRSVVHMIADGISASNTDRGYVLRRLI 305
Query: 349 RRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELR 408
RR VR GRL+GI EG F+ +AE AI LS + +V+ RE I EL+REE R
Sbjct: 306 RRVVRHGRLIGI--------EGQFITKVAEVAIALSESVYGNVRERETVIKAELEREEAR 357
Query: 409 FVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGV 468
F++TLERGEKLL+ +L S ++SG DAF LYDT+GFP+E+T+E+AEE G+
Sbjct: 358 FLETLERGEKLLESILEKEKS---------QISGVDAFTLYDTYGFPLELTQEIAEEQGL 408
Query: 469 SVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLSAKAIVESL 527
SVD GF+ EM+ Q+++S+AAH + L+V S D LAE I TEFLGY L A A V ++
Sbjct: 409 SVDTAGFEQEMKKQQQRSKAAHETIDLTVQGSLDKLAEHIHPTEFLGYTDLQATATVTAV 468
Query: 528 LVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVKKS 587
LV GK V + G++V+++L++TPFYAESGGQIGD G+L G N ++ V+DV+K
Sbjct: 469 LVAGKTVESAAAGTEVQIVLDKTPFYAESGGQIGDKGYL---TGDN---LLIRVEDVQKE 522
Query: 588 LGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQAG 647
G +F+H G + G++ G + A +D R+RA+ +HTATHLLQ+ALKK++ SQAG
Sbjct: 523 SG-IFIHFGRVERGIVTTGDTINAQIDRSCRRRAQANHTATHLLQSALKKLVDGGISQAG 581
Query: 648 SLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAMFG 707
SLV+F+RLRFDFN RPL EL+++E IN WI +A+ + VM L++AK+ GAIAMFG
Sbjct: 582 SLVSFERLRFDFNCPRPLTGAELQQVEEQINTWIAEAHDTEIAVMGLEEAKQKGAIAMFG 641
Query: 708 EKYGEQVKI 716
EKYG +V++
Sbjct: 642 EKYGSEVRV 650
>gi|425457103|ref|ZP_18836809.1| Alanyl-tRNA synthetase [Microcystis aeruginosa PCC 9807]
gi|389801631|emb|CCI19224.1| Alanyl-tRNA synthetase [Microcystis aeruginosa PCC 9807]
Length = 874
Score = 783 bits (2022), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/669 (57%), Positives = 506/669 (75%), Gaps = 25/669 (3%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
SG IR+RFLDF+A+R HK+LPSASLVPEDPTVLLTIAGML FKPIFLG+ + RA T
Sbjct: 6 SGSEIRQRFLDFFAARNHKILPSASLVPEDPTVLLTIAGMLPFKPIFLGQKTPEFTRATT 65
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
SQ+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFK++AI WAWE ST F LP RL +
Sbjct: 66 SQKCIRTNDIENVGRTARHHTFFEMLGNFSFGDYFKEQAIAWAWELSTEVFNLPPERLVV 125
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
SV+++D+EAF IW ++G+P I++MG DNFW SG TGPCGPCSEIYYDFHP+ G
Sbjct: 126 SVFKEDEEAFAIWRDKIGIPAHRIQKMGEADNFWVSGPTGPCGPCSEIYYDFHPELGDKT 185
Query: 229 VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDL 288
+DL DD+RFIEFYNLVFMQYN+ DG+L PL KNIDTG+GLER+A+ILQKV NNYETDL
Sbjct: 186 IDLEDDSRFIEFYNLVFMQYNRDADGNLTPLANKNIDTGMGLERMAQILQKVANNYETDL 245
Query: 289 IFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLI 348
IFPI+ +A+ LA + Y +++++T ++LK+IGDH+R++V++++DG+ SN RGYV+RRLI
Sbjct: 246 IFPIVAEAARLAAIDYQKADEKTKVSLKVIGDHVRSVVHMIADGISASNTDRGYVLRRLI 305
Query: 349 RRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELR 408
RR VR GRL+GI EG F+ +AE AI LS + +V+ RE+ I EL+REE R
Sbjct: 306 RRVVRHGRLIGI--------EGQFITKVAEVAIALSESVYGNVRERERVIKAELEREEAR 357
Query: 409 FVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGV 468
F++TLERGEKLL+ +L S ++SG DAF LYDT+GFP+E+T+E+AEE G+
Sbjct: 358 FLETLERGEKLLESILEKEKS---------QISGVDAFTLYDTYGFPLELTQEIAEEQGL 408
Query: 469 SVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLSAKAIVESL 527
SVD GF+ EM+ Q+++S+AAH + L+V S D LAE I TEFLGY L A A V ++
Sbjct: 409 SVDTAGFEQEMKKQQQRSKAAHETIDLTVQGSLDKLAEHIHPTEFLGYTDLQATATVTAV 468
Query: 528 LVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVKKS 587
LV GK V + G++V+V+L++TPFYAESGGQIGD G+L G N ++ V+DV+K
Sbjct: 469 LVAGKTVESAASGTEVQVVLDQTPFYAESGGQIGDKGYL---TGDN---LLIRVEDVQKE 522
Query: 588 LGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQAG 647
G +F+H G I G++ G + A +D R+RA+ +HTATHLLQ+ALKK++ SQAG
Sbjct: 523 SG-IFIHFGRIERGIVTTGDTINAQIDRSCRRRAQANHTATHLLQSALKKLVDGGISQAG 581
Query: 648 SLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAMFG 707
SLV+F+RLRFDFN RPL +EL+++E IN WI +A+ + VM L++AK+ GAIAMFG
Sbjct: 582 SLVSFERLRFDFNCPRPLTSSELQQVEEQINTWIAEAHDTEIAVMGLEEAKQKGAIAMFG 641
Query: 708 EKYGEQVKI 716
EKYG +V++
Sbjct: 642 EKYGSEVRV 650
>gi|390441780|ref|ZP_10229812.1| Alanyl-tRNA synthetase [Microcystis sp. T1-4]
gi|389834916|emb|CCI33938.1| Alanyl-tRNA synthetase [Microcystis sp. T1-4]
Length = 874
Score = 783 bits (2021), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/669 (57%), Positives = 504/669 (75%), Gaps = 25/669 (3%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
SG IR+RFLDF+A+R HK+LPSASLVPEDPTVLLTIAGML FKPIFLG+ + PRA T
Sbjct: 6 SGSEIRQRFLDFFAARNHKILPSASLVPEDPTVLLTIAGMLPFKPIFLGQKTPEFPRATT 65
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
SQ+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFK++AI WAWE ST F LP RL +
Sbjct: 66 SQKCIRTNDIENVGRTARHHTFFEMLGNFSFGDYFKEQAIAWAWELSTEVFNLPPERLVV 125
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
SV+ +D+EAF IW ++G+P I++MG DNFW SG TGPCGPCSEIYYDFHP+ G
Sbjct: 126 SVFREDEEAFAIWRDKIGIPAHRIQKMGEADNFWVSGPTGPCGPCSEIYYDFHPELGDKT 185
Query: 229 VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDL 288
+DL DD+RFIEFYNLVFMQYN+ DG+L PL KNIDTG+GLER+A+ILQKV NNYETDL
Sbjct: 186 IDLEDDSRFIEFYNLVFMQYNRDADGNLTPLANKNIDTGMGLERMAQILQKVANNYETDL 245
Query: 289 IFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLI 348
IFPI+ +A+ LA + Y +++++T ++LK+IGDH+R++V++++DG+ SN RGYV+RRLI
Sbjct: 246 IFPIVAEAARLAAIDYQKADEKTKVSLKVIGDHVRSVVHMVADGISASNTDRGYVLRRLI 305
Query: 349 RRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELR 408
RR VR GRL+GI EG F+ +AE AI LS + +V+ RE I EL+REE R
Sbjct: 306 RRVVRHGRLIGI--------EGQFITKVAEVAIALSESVYGNVRERETVIKAELEREEAR 357
Query: 409 FVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGV 468
F++TLERGEKLL+ +L S ++SG DAF LYDT+GFP+E+T+E+AEE G+
Sbjct: 358 FLETLERGEKLLESILEKEKS---------QISGVDAFTLYDTYGFPLELTQEIAEEQGL 408
Query: 469 SVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLSAKAIVESL 527
SVD GF+ EM+ Q+++S+AAH + L+V S D LAE I TEFLGY L A A V ++
Sbjct: 409 SVDTAGFEQEMKKQQQRSKAAHETIDLTVQGSLDKLAEHIHPTEFLGYTDLQATATVTAV 468
Query: 528 LVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVKKS 587
LV GK V + G++V+++L++TPFYAESGGQIGD G+L G N ++ V+DV+K
Sbjct: 469 LVAGKTVESAAAGTEVQIVLDKTPFYAESGGQIGDKGYL---TGDN---LLIRVEDVQKE 522
Query: 588 LGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQAG 647
G +F+H G I G++ G + A +D R+RA+ +HTATHLLQ+ALKK++ SQAG
Sbjct: 523 SG-IFIHFGRIERGIVTTGDTINAQIDRSCRRRAQANHTATHLLQSALKKLVDGGISQAG 581
Query: 648 SLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAMFG 707
SLV+F+RLRFDFN RPL EL+++E IN WI +A+ + VM L++AK+ GAIAMFG
Sbjct: 582 SLVSFERLRFDFNCPRPLTGAELQQVEEQINTWIAEAHDTEIAVMGLEEAKQKGAIAMFG 641
Query: 708 EKYGEQVKI 716
EKYG +V++
Sbjct: 642 EKYGSEVRV 650
>gi|425445455|ref|ZP_18825485.1| Alanyl-tRNA synthetase [Microcystis aeruginosa PCC 9443]
gi|389734536|emb|CCI01809.1| Alanyl-tRNA synthetase [Microcystis aeruginosa PCC 9443]
Length = 874
Score = 783 bits (2021), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/669 (57%), Positives = 505/669 (75%), Gaps = 25/669 (3%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
SG IR+RFLDF+A+R HK+LPSASLVPEDPTVLLTIAGML FKPIFLG+ + RA T
Sbjct: 6 SGSEIRQRFLDFFAARNHKILPSASLVPEDPTVLLTIAGMLPFKPIFLGQKTPEFTRATT 65
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
SQ+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFK++AI WAWE ST F LP RL +
Sbjct: 66 SQKCIRTNDIENVGRTARHHTFFEMLGNFSFGDYFKEQAIAWAWELSTEVFNLPPERLVV 125
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
SV+++D+EAF IW ++G+P I++MG DNFW SG TGPCGPCSEIYYDFHP+ G
Sbjct: 126 SVFKEDEEAFAIWRDKIGIPAHRIQKMGEADNFWVSGPTGPCGPCSEIYYDFHPELGDKT 185
Query: 229 VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDL 288
+DL DD+RFIEFYNLVFMQYN+ DG+L PL KNIDTG+GLER+A+ILQKV NNYETDL
Sbjct: 186 IDLEDDSRFIEFYNLVFMQYNRDADGNLTPLANKNIDTGMGLERMAQILQKVANNYETDL 245
Query: 289 IFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLI 348
IFPI+ +A++LA + Y +++++T ++LK+IGDH+R++V++++DG+ SN RGYV+RRLI
Sbjct: 246 IFPIVAEAAQLAAIDYQKADEKTKVSLKVIGDHVRSVVHMIADGISASNTDRGYVLRRLI 305
Query: 349 RRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELR 408
RR VR GRL+GI EG F+ +AE AI LS + +V+ RE I EL+REE R
Sbjct: 306 RRVVRHGRLIGI--------EGQFISKVAEVAIALSESVYGNVRERETVIKAELEREEAR 357
Query: 409 FVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGV 468
F++TLERGEKLL+ +L S ++SG DAF LYDT+GFP+E+T+E+AEE G+
Sbjct: 358 FLETLERGEKLLESILEKEKS---------QISGVDAFTLYDTYGFPLELTQEIAEEQGL 408
Query: 469 SVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLSAKAIVESL 527
SVD GF+ EM+ Q+++S+AAH + L+V S D LAE I TEFLGY L A A V ++
Sbjct: 409 SVDTAGFEQEMKKQQQRSKAAHETIDLTVQGSLDKLAEHIHPTEFLGYTDLQATATVTAV 468
Query: 528 LVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVKKS 587
LV GK + G++V+V+L++TPFYAESGGQIGD G+L G N ++ V+DV+K
Sbjct: 469 LVAGKTAESAAAGTEVQVVLDKTPFYAESGGQIGDKGYL---TGDN---LLIRVEDVQKE 522
Query: 588 LGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQAG 647
G +F+H G I G++ G + A +D R+RA+ +HTATHLLQ+ALKK++ SQAG
Sbjct: 523 SG-IFIHFGRIERGIVTTGDTINAQIDRSCRRRAQANHTATHLLQSALKKLVDGGISQAG 581
Query: 648 SLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAMFG 707
SLV+F+RLRFDFN RPL +EL+++E IN WI +A+ + VM L++AK+ GAIAMFG
Sbjct: 582 SLVSFERLRFDFNCPRPLTSSELQQVEEQINTWIAEAHDTEIAVMGLEEAKQKGAIAMFG 641
Query: 708 EKYGEQVKI 716
EKYG +V++
Sbjct: 642 EKYGSEVRV 650
>gi|428306453|ref|YP_007143278.1| alanyl-tRNA synthetase [Crinalium epipsammum PCC 9333]
gi|428247988|gb|AFZ13768.1| alanyl-tRNA synthetase [Crinalium epipsammum PCC 9333]
Length = 883
Score = 782 bits (2020), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/669 (57%), Positives = 507/669 (75%), Gaps = 21/669 (3%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
SG+ IR+ FLDFYA RGH+VLPSASL+PEDPTVLLTIAGML FKPIFLG+ + PRA +
Sbjct: 9 SGNEIRQTFLDFYAQRGHQVLPSASLIPEDPTVLLTIAGMLPFKPIFLGQRNSEFPRATS 68
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
SQ+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFK++AI W WE ST FGLP L +
Sbjct: 69 SQKCIRTNDIENVGRTARHHTFFEMLGNFSFGDYFKEQAIAWGWELSTKVFGLPPENLVV 128
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
SV+EDDDEAF IW ++GV + IKRMGADDNFW SGATGPCGPCSEIYYDFHP++G +
Sbjct: 129 SVFEDDDEAFAIWRDQIGVAEKRIKRMGADDNFWVSGATGPCGPCSEIYYDFHPEKGDDN 188
Query: 229 VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDL 288
+DL DD+RFIEFYNLVFMQYN+ +G+L PL+ KNIDTG+GLER+A+ILQKVPNNYETDL
Sbjct: 189 IDLEDDSRFIEFYNLVFMQYNRDAEGNLTPLQNKNIDTGMGLERMAQILQKVPNNYETDL 248
Query: 289 IFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLI 348
IFPIIK A E+A + Y QS+++T ++LK+IGDH+R++V++++DG+ SN+GRGYV+RRLI
Sbjct: 249 IFPIIKTAGEIAGIDYVQSDEKTKVSLKVIGDHVRSVVHMIADGIRASNVGRGYVLRRLI 308
Query: 349 RRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELR 408
RR VR GRL+GI G+ F P +AE AI LS +V+ +E I EL+ EE R
Sbjct: 309 RRVVRHGRLIGISGE--------FTPQVAESAIALSESAYPNVRLKEAAIKAELQLEENR 360
Query: 409 FVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGV 468
F++TLERGEKLL++++A + ++ +SG+ AF LYDT+GFP+E+T+E+AEE G+
Sbjct: 361 FLKTLERGEKLLEEIIAQIKQQGKQ-----EISGESAFTLYDTYGFPLELTQEIAEEQGL 415
Query: 469 SVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLSAKAIVESL 527
+VD GF+ EM+ Q +++ AH + L+V S D LAE I TEFLGY +A A +E L
Sbjct: 416 TVDQTGFETEMQKQIERAKDAHETIDLTVQGSLDKLAEHIHATEFLGYKQAAANAKIEVL 475
Query: 528 LVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVKKS 587
LV GK V + G++V+++L++TPFYAESGGQIGD G++ + VV ++DVKK
Sbjct: 476 LVGGKSVEEAEAGTEVQIVLDKTPFYAESGGQIGDRGYI------SGDAIVVRIEDVKKE 529
Query: 588 LGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQAG 647
FVH G I G L VG V A +D R+RA+ +H+ATHLLQAALKK+I + QAG
Sbjct: 530 -SDFFVHFGRIERGTLRVGDAVNAQIDRSCRRRAQANHSATHLLQAALKKLIDESIGQAG 588
Query: 648 SLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAMFG 707
SLV+FDRLRFD++F+R L E++++E +N WI +A+ +V+ L +AK GA AMFG
Sbjct: 589 SLVSFDRLRFDYSFNRALTPEEVQQVEEQVNTWIAEAHTAHIEVIPLAEAKAKGATAMFG 648
Query: 708 EKYGEQVKI 716
EKYG++V++
Sbjct: 649 EKYGDEVRV 657
>gi|434394494|ref|YP_007129441.1| alanyl-tRNA synthetase [Gloeocapsa sp. PCC 7428]
gi|428266335|gb|AFZ32281.1| alanyl-tRNA synthetase [Gloeocapsa sp. PCC 7428]
Length = 879
Score = 782 bits (2019), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/669 (58%), Positives = 498/669 (74%), Gaps = 22/669 (3%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
SG+ IR++FLDFYA RGH VLPSASLVPEDPTVLLTIAGML FKPIFLG+ + RA T
Sbjct: 8 SGNEIRQKFLDFYAQRGHTVLPSASLVPEDPTVLLTIAGMLPFKPIFLGQRSPEFKRATT 67
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
SQ+CIRTND+ENVGRT RHHTFFEMLGNFSFGDYFK++AI W WE ST FGLP RL +
Sbjct: 68 SQKCIRTNDIENVGRTKRHHTFFEMLGNFSFGDYFKEQAIAWGWEISTEVFGLPPERLVV 127
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
SV+EDDDEA+ IW +VGV HIKRMG DDNFW SG TGPCGPCSEIYYDF+P+RG D
Sbjct: 128 SVFEDDDEAYAIWRDKVGVSETHIKRMGEDDNFWASGPTGPCGPCSEIYYDFYPERG-DD 186
Query: 229 VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDL 288
++L DDTRFIEFYNLVFMQYN+ DG L PL+ KNIDTG+GLER+A+ILQ VPNNYETDL
Sbjct: 187 INLEDDTRFIEFYNLVFMQYNRDADGHLTPLQNKNIDTGMGLERMAQILQAVPNNYETDL 246
Query: 289 IFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLI 348
IFPIIK A+E+A ++YAQS++ T ++LK+IGDH+RA+V++++D + SN+GRGYV+RRLI
Sbjct: 247 IFPIIKTAAEIAGINYAQSDEATQVSLKVIGDHVRAVVHMIADEIHASNVGRGYVLRRLI 306
Query: 349 RRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELR 408
RR VR GRL+GI EG F +AE AI LS +V+ +E I EL+REE R
Sbjct: 307 RRIVRHGRLIGI--------EGEFTTQVAEAAIALSESAYPEVRQQEDAIKAELQREESR 358
Query: 409 FVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGV 468
F++TL RGE L LA+ + + ++ G ++ G+DAF LYDT+GFP+E+T+E+A E +
Sbjct: 359 FLKTLARGEDL----LAEIIEKVKQQGKT-QIDGRDAFTLYDTYGFPLELTQEIAAERDL 413
Query: 469 SVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLSAKAIVESL 527
+VD G++ M Q+ +SQ AH + L+V S D LA++I TEF+GY S+ A+VE++
Sbjct: 414 TVDEAGYEAAMSEQQTRSQEAHETIDLTVQGSLDKLADEIKVTEFVGYTQFSSTAVVEAI 473
Query: 528 LVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVKKS 587
L+NG+ V G+DV+V+L+ TPFYAESGGQIGD G++ Q A+VEV DV++
Sbjct: 474 LINGESVESAEAGTDVQVVLDTTPFYAESGGQIGDRGYMSSDQ------ALVEVADVQRE 527
Query: 588 LGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQAG 647
++H G + G L+VG ++ A +D R+R + HHTATHLLQAALKK++ SQAG
Sbjct: 528 -SDFYLHIGRVVRGKLQVGDKINAQIDSACRRRVQAHHTATHLLQAALKKIVDDSISQAG 586
Query: 648 SLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAMFG 707
SLV+FDRLRFDFN R L E++++E +N WI A +M L +AK GAIAMFG
Sbjct: 587 SLVSFDRLRFDFNCPRALTPEEIQQVEEQVNAWITWAVQADVAIMPLAEAKAKGAIAMFG 646
Query: 708 EKYGEQVKI 716
EKYGEQV++
Sbjct: 647 EKYGEQVRV 655
>gi|428316168|ref|YP_007114050.1| alanyl-tRNA synthetase [Oscillatoria nigro-viridis PCC 7112]
gi|428239848|gb|AFZ05634.1| alanyl-tRNA synthetase [Oscillatoria nigro-viridis PCC 7112]
Length = 886
Score = 781 bits (2016), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/670 (58%), Positives = 507/670 (75%), Gaps = 17/670 (2%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
SG IR+ FL FYA RGHK+LPSASLVPEDPTVLLTIAGMLQFKPIFLG+ + PRA T
Sbjct: 9 SGSQIRETFLQFYAQRGHKILPSASLVPEDPTVLLTIAGMLQFKPIFLGQRAAESPRATT 68
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
SQ+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFKK+AI WAWE ST FGLPA+ L +
Sbjct: 69 SQKCIRTNDIENVGRTARHHTFFEMLGNFSFGDYFKKQAIAWAWELSTEVFGLPASNLVV 128
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
SV+ DDDEAF IW E+G+P + I+RMG DDNFW SG TGPCGPCSEIYYDFHP+RG +
Sbjct: 129 SVFRDDDEAFAIWRDEIGIPGDRIQRMGEDDNFWESGPTGPCGPCSEIYYDFHPERG-DN 187
Query: 229 VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDL 288
+DL DD+RFIEFYNLVFMQYNK +G+L PLK +NIDTG+GLER+A+ILQKVPNNYETDL
Sbjct: 188 IDLEDDSRFIEFYNLVFMQYNKDAEGNLTPLKNQNIDTGMGLERMAQILQKVPNNYETDL 247
Query: 289 IFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLI 348
IFPI++ A+E+A + Y S+++ ++LK+IGDH+RA+V++++D + SN+GRGY++RRLI
Sbjct: 248 IFPIVQSAAEIAGIDYHNSDEKVKVSLKVIGDHIRAVVHMIADEIRASNVGRGYILRRLI 307
Query: 349 RRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELR 408
RR VR GRL+GI+G+ F +AE AI LS +V+ RE +I EL REE +
Sbjct: 308 RRVVRHGRLIGIQGE--------FTVRVAESAIALSEAAYPNVRQRESQIKAELAREEAQ 359
Query: 409 FVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGV 468
F++TLERGEKLL+++ + RT++ + ++SGQDAF LYDT+GFP+E+T+E+AEE G+
Sbjct: 360 FLKTLERGEKLLEEI----VDRTKQQAN-QQISGQDAFTLYDTYGFPLELTQEIAEEQGI 414
Query: 469 SVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLSAKAIVESL 527
+VD+ GF+ M+ Q+ +++ A + L+V S D LAE I TEF+GY LS+ A VE +
Sbjct: 415 TVDLDGFEAAMKEQQTRAKDARQTIDLTVQGSLDKLAETIQGTEFVGYAELSSLAEVEVI 474
Query: 528 LVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT-QGTNQQTAVVEVKDVKK 586
LV+GK V + + G++V+V+LN+TPFYAESGGQIGD G+L + QG N + +V V DVKK
Sbjct: 475 LVDGKSVEEAAAGTEVQVVLNQTPFYAESGGQIGDKGYLNGSIQGENGEGLLVRVDDVKK 534
Query: 587 SLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQA 646
FVH G + G L VG + A +D R+R + +HTATHLLQ+AL+K++ SQA
Sbjct: 535 E-SDFFVHFGFVERGTLRVGDSITAKIDNSGRRRIQANHTATHLLQSALRKIVDDSISQA 593
Query: 647 GSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAMF 706
GSLV +RLRFDFN R + EL++IE L+N WI +A+ M + A+ GA AMF
Sbjct: 594 GSLVTSERLRFDFNSPRAVTAEELQKIEDLVNSWIAEAHAAVVAEMPIAQAREKGATAMF 653
Query: 707 GEKYGEQVKI 716
GEKYG+ V++
Sbjct: 654 GEKYGDVVRV 663
>gi|257059315|ref|YP_003137203.1| alanyl-tRNA synthetase [Cyanothece sp. PCC 8802]
gi|256589481|gb|ACV00368.1| alanyl-tRNA synthetase [Cyanothece sp. PCC 8802]
Length = 879
Score = 780 bits (2015), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/669 (57%), Positives = 502/669 (75%), Gaps = 23/669 (3%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
+G IR +FL FYAS+ H++LPSASLVPEDPTVLLTIAGML FKPIFLG+ PRA T
Sbjct: 9 TGAQIRDKFLQFYASKHHQILPSASLVPEDPTVLLTIAGMLPFKPIFLGQKNPDYPRATT 68
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
SQ+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFK++AI W+WE ST F LP + +
Sbjct: 69 SQKCIRTNDIENVGRTARHHTFFEMLGNFSFGDYFKEQAIAWSWELSTQVFNLPPENIVV 128
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
SV+E+DDEAF+IW +G+P + IKRMG DNFW +G TGPCGPCSE+YYDFHP+ G +
Sbjct: 129 SVFEEDDEAFQIWQNSIGIPPQRIKRMGEKDNFWKAGPTGPCGPCSELYYDFHPELGEEN 188
Query: 229 VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDL 288
+DL DD+RFIEFYNLVFMQYN+ +G+L PL+ KNIDTG+GLER+A+ILQ+VPNNYETDL
Sbjct: 189 IDLEDDSRFIEFYNLVFMQYNRDAEGNLTPLQNKNIDTGMGLERMAQILQQVPNNYETDL 248
Query: 289 IFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLI 348
IFPII+ A+++A ++Y ++ +T ++LK+IGDH+R++V++++DG+ SN RGYV+RRLI
Sbjct: 249 IFPIIETAAKIAGINYKNTDKKTKVSLKVIGDHVRSVVHMIADGITASNTDRGYVLRRLI 308
Query: 349 RRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELR 408
RR VR GRL+GI EG F+ +AE A++LS + +V+ RE I EL+REE R
Sbjct: 309 RRVVRHGRLIGI--------EGEFITQVAETAMQLSESVYPNVRERETAIKGELQREESR 360
Query: 409 FVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGV 468
F++TLERGEKLL +++A T +SG DAF LYDT+GFP+E+T+E+AEE G+
Sbjct: 361 FLETLERGEKLLAEIIAKTPKNT-------AISGVDAFTLYDTYGFPLELTQEIAEEQGL 413
Query: 469 SVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLSAKAIVESL 527
+VD++GF+ M+ Q+ +S+AAH + L+V S D LAE I TEFLGY + A V+++
Sbjct: 414 TVDVEGFEAAMKEQQERSKAAHETIDLTVQGSLDKLAEHIHPTEFLGYSSPQIMAKVQAV 473
Query: 528 LVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVKKS 587
LV+GK V S G++V+++L++TPFY ESGGQIGD G+L G N VV ++DVKK
Sbjct: 474 LVDGKTVENASAGTEVQIILDQTPFYGESGGQIGDRGYL---TGDN---LVVRIEDVKKE 527
Query: 588 LGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQAG 647
G +FVH G + G++ V V A +D R+R + HHTATHLLQAALKKV+ + SQAG
Sbjct: 528 SG-IFVHFGRVERGIIAVENTVTATIDRACRRRVQAHHTATHLLQAALKKVVDESISQAG 586
Query: 648 SLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAMFG 707
SLV FDRLRFDFN R + EL+EIE LIN WI +A+ Q +M L+ AK GAIAMFG
Sbjct: 587 SLVDFDRLRFDFNCPRSITSAELQEIEALINTWIAEAHDTQVSIMDLEKAKAKGAIAMFG 646
Query: 708 EKYGEQVKI 716
EKY +V++
Sbjct: 647 EKYSAEVRV 655
>gi|218246265|ref|YP_002371636.1| alanyl-tRNA synthetase [Cyanothece sp. PCC 8801]
gi|218166743|gb|ACK65480.1| alanyl-tRNA synthetase [Cyanothece sp. PCC 8801]
Length = 879
Score = 780 bits (2013), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/669 (57%), Positives = 501/669 (74%), Gaps = 23/669 (3%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
+G IR +FL FYAS+ H++LPSASLVPEDPTVLLTIAGML FKPIFLG+ PRA T
Sbjct: 9 TGAQIRDKFLQFYASKHHQILPSASLVPEDPTVLLTIAGMLPFKPIFLGQKNPDYPRATT 68
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
SQ+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFK++AI W+WE ST F LP + +
Sbjct: 69 SQKCIRTNDIENVGRTARHHTFFEMLGNFSFGDYFKEQAIAWSWELSTQVFNLPPENIVV 128
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
SV+E+DDEAF+IW +G+P + IKRMG DNFW +G TGPCGPCSE+YYDFHP+ G +
Sbjct: 129 SVFEEDDEAFQIWQNSIGIPPQRIKRMGEKDNFWKAGPTGPCGPCSELYYDFHPELGEEN 188
Query: 229 VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDL 288
+DL DD+RFIEFYNLVFMQYN+ +G+L PL+ KNIDTG+GLER+A+ILQ+VPNNYETDL
Sbjct: 189 IDLEDDSRFIEFYNLVFMQYNRDAEGNLTPLQNKNIDTGMGLERMAQILQQVPNNYETDL 248
Query: 289 IFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLI 348
IFPII+ A+++A ++Y ++++T ++LK+IGDH+R++V++++DG+ SN RGYV+RRLI
Sbjct: 249 IFPIIETAAKIAGINYKNTDEKTKVSLKVIGDHVRSVVHMIADGITASNTDRGYVLRRLI 308
Query: 349 RRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELR 408
RR VR GRL+GI EG F+ +AE A++LS + +V+ RE I EL+REE R
Sbjct: 309 RRVVRHGRLIGI--------EGEFITQVAETAMQLSESVYPNVRERETAIKGELQREESR 360
Query: 409 FVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGV 468
F++TLERGEKLL +++A T +SG DAF LYDT+GFP+E+T+E+AEE G+
Sbjct: 361 FLETLERGEKLLAEIIAKTPKNT-------AISGVDAFTLYDTYGFPLELTQEIAEEQGL 413
Query: 469 SVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLSAKAIVESL 527
+VD++GF+ M+ Q+ +S+AAH + L+V S D LAE I TEFLGY + A V+++
Sbjct: 414 TVDVEGFEAAMKEQQERSKAAHETIDLTVQGSLDKLAEHIHPTEFLGYSSPQIIAKVQAV 473
Query: 528 LVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVKKS 587
LV GK V S G++V+++L++TPFY ESGGQIGD G+L G N VV ++DVKK
Sbjct: 474 LVAGKTVENASAGTEVQIILDQTPFYGESGGQIGDRGYL---TGDN---LVVRIEDVKKE 527
Query: 588 LGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQAG 647
G +FVH G + G + V V A +D R+R + HHTATHLLQAALKKV+ + SQAG
Sbjct: 528 SG-IFVHFGRVERGTIAVENTVTATIDRACRRRVQAHHTATHLLQAALKKVVDESISQAG 586
Query: 648 SLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAMFG 707
SLV FDRLRFDFN R + EL+EIE LIN WI +A+ Q +M L+ AK GAIAMFG
Sbjct: 587 SLVDFDRLRFDFNCPRSITSAELQEIEALINTWIAEAHDTQVSIMDLEKAKAKGAIAMFG 646
Query: 708 EKYGEQVKI 716
EKY +V++
Sbjct: 647 EKYSAEVRV 655
>gi|425458889|ref|ZP_18838375.1| Alanyl-tRNA synthetase [Microcystis aeruginosa PCC 9808]
gi|389823608|emb|CCI28041.1| Alanyl-tRNA synthetase [Microcystis aeruginosa PCC 9808]
Length = 874
Score = 780 bits (2013), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/669 (57%), Positives = 504/669 (75%), Gaps = 25/669 (3%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
SG IR+RFLDF+A+R HK+LPSASLVPEDPTVLLTIAGML FKPIFLG+ + PRA T
Sbjct: 6 SGSEIRQRFLDFFAARNHKILPSASLVPEDPTVLLTIAGMLPFKPIFLGQKTPEFPRATT 65
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
SQ+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFK++AI WAWE ST F L RL +
Sbjct: 66 SQKCIRTNDIENVGRTARHHTFFEMLGNFSFGDYFKEQAIAWAWELSTEVFNLSPERLVV 125
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
SV+++D+EAF IW ++G+P I++MG DNFW SG TGPCGPCSEIYYDFHP+ G
Sbjct: 126 SVFKEDEEAFAIWRDKIGIPAHRIQKMGEADNFWVSGPTGPCGPCSEIYYDFHPELGDKT 185
Query: 229 VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDL 288
+DL DD+RFIEFYNLVFMQYN+ +G+L PL KNIDTG+GLER+A+ILQKV NNYETDL
Sbjct: 186 IDLEDDSRFIEFYNLVFMQYNRDAEGNLTPLANKNIDTGMGLERMAQILQKVANNYETDL 245
Query: 289 IFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLI 348
IFPI+ +A+ LA + Y +++++T ++LK+IGDH+R++V++++DG+ SN RGYV+RRLI
Sbjct: 246 IFPIVAEAARLAAIDYQKADEKTKVSLKVIGDHVRSVVHMIADGISASNTDRGYVLRRLI 305
Query: 349 RRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELR 408
RR VR GRL+GI EG F+ +AE AI LS + +V+ RE I EL+REE R
Sbjct: 306 RRVVRHGRLIGI--------EGQFITKVAEVAIALSESVYGNVRERETVIKAELEREEAR 357
Query: 409 FVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGV 468
F++TLERGEKLL+ +L S ++SG DAF LYDT+GFP+E+T+E+AEE G+
Sbjct: 358 FLETLERGEKLLESILEKEKS---------QISGVDAFTLYDTYGFPLELTQEIAEEQGL 408
Query: 469 SVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLSAKAIVESL 527
SVD GF+ EM+ Q+++S+AAH + L+V S D LAE I TEFLGY L A A V ++
Sbjct: 409 SVDTAGFEQEMKKQQQRSKAAHETIDLTVQGSLDKLAEHIHPTEFLGYTDLQATATVTAV 468
Query: 528 LVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVKKS 587
LV GK V + G++V+++L++TPFYAESGGQIGD G+L G N ++ V+DV+K
Sbjct: 469 LVAGKTVESAAAGTEVQIVLDQTPFYAESGGQIGDKGYL---TGDN---LLIRVEDVQKE 522
Query: 588 LGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQAG 647
G +F+H G I G++ G + A +D R+RA+ +HTATHLLQ+ALKK++ SQAG
Sbjct: 523 SG-IFIHFGRIERGIVTTGDTINAQIDRACRRRAQANHTATHLLQSALKKLVDGGISQAG 581
Query: 648 SLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAMFG 707
SLV+F+RLRFDFN RPL EL+++E IN WI +A+ + VM L++AK+ GAIAMFG
Sbjct: 582 SLVSFERLRFDFNCPRPLTSAELQQVEEQINTWIAEAHDTEIAVMGLEEAKQKGAIAMFG 641
Query: 708 EKYGEQVKI 716
EKYG +V++
Sbjct: 642 EKYGSEVRV 650
>gi|428769863|ref|YP_007161653.1| alanyl-tRNA synthetase [Cyanobacterium aponinum PCC 10605]
gi|428684142|gb|AFZ53609.1| alanyl-tRNA synthetase [Cyanobacterium aponinum PCC 10605]
Length = 881
Score = 779 bits (2011), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/672 (57%), Positives = 509/672 (75%), Gaps = 22/672 (3%)
Query: 47 PS-SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPR 105
PS +G+ IR++FL+F+A + HK+LPSASL+PEDPTVLLTIAGML FKPIFLG+ + PR
Sbjct: 6 PSLTGNEIREKFLNFFAEKQHKILPSASLIPEDPTVLLTIAGMLPFKPIFLGQKTPEYPR 65
Query: 106 AATSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANR 165
A TSQ+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFK EAI W WE ST F LP R
Sbjct: 66 ATTSQKCIRTNDIENVGRTARHHTFFEMLGNFSFGDYFKSEAIAWGWELSTQVFKLPPER 125
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRG 225
+ +SV+ +DDEAF IW EVG+P + I RMG +DNFW SGATGPCGPCSE+YYDF P+ G
Sbjct: 126 IVVSVFREDDEAFAIWRDEVGIPEKRIIRMGEEDNFWKSGATGPCGPCSELYYDFKPELG 185
Query: 226 CSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYE 285
++DL DD+RFIEFYNLVFMQYN+ +G+L PL+ KNIDTG+GLER+A+ILQ+VPNNYE
Sbjct: 186 DDNIDLEDDSRFIEFYNLVFMQYNRDAEGNLTPLQNKNIDTGMGLERMAQILQQVPNNYE 245
Query: 286 TDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVR 345
TDLIFPII+ A++LA++ Y + ++T ++LK+IGDH+R++V +++DG+ SN GRGYV+R
Sbjct: 246 TDLIFPIIETAAKLADIDYGTAENKTKVSLKVIGDHVRSVVQMIADGISASNTGRGYVLR 305
Query: 346 RLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKRE 405
RLIRR VR GRL+GI G+ F+ +AEKAI+L + S+ + RE+ I EL+RE
Sbjct: 306 RLIRRVVRHGRLIGIDGN--------FINEVAEKAIQLLEGVYSNTREREKVIKTELQRE 357
Query: 406 ELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEE 465
E F+ TLERGEKLL++++ + ++ +V +SG+DAF LYDT GFP+E+T+E+AEE
Sbjct: 358 ESAFLATLERGEKLLNEVI---IKLKKDQKTV--ISGEDAFTLYDTDGFPLELTQEIAEE 412
Query: 466 HGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLSAKAIV 524
G++VD++GF+ EME QR +SQ+AH + L+V S D LAE I TEFLGY + +
Sbjct: 413 EGLTVDIEGFEAEMEAQRGRSQSAHETIDLTVQGSIDKLAEHIHPTEFLGYHEYQLISQI 472
Query: 525 ESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDV 584
E+LLV GK V K GS V+++LN+TPFYAESGGQIGD G+L +V ++DV
Sbjct: 473 EALLVEGKSVEKAESGSKVQLILNKTPFYAESGGQIGDKGYLA------GDDVLVSIEDV 526
Query: 585 KKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETS 644
+K G FVH GT+ G + +G+++ A VD R R + +HTATHLLQ+ALKKV+ + S
Sbjct: 527 QKESG-FFVHYGTVERGTINIGQKLRATVDKACRNRVRTNHTATHLLQSALKKVVDENIS 585
Query: 645 QAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIA 704
QAGSLV+FD+LRFDFN + L ++L+++E LIN WI +A+ VM L++AK GAIA
Sbjct: 586 QAGSLVSFDKLRFDFNCPQALTKSQLQQVEDLINTWIAEAHTAYISVMPLEEAKSKGAIA 645
Query: 705 MFGEKYGEQVKI 716
MFGEKYG +V++
Sbjct: 646 MFGEKYGSEVRV 657
>gi|434396943|ref|YP_007130947.1| alanyl-tRNA synthetase [Stanieria cyanosphaera PCC 7437]
gi|428268040|gb|AFZ33981.1| alanyl-tRNA synthetase [Stanieria cyanosphaera PCC 7437]
Length = 877
Score = 778 bits (2010), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/669 (57%), Positives = 493/669 (73%), Gaps = 25/669 (3%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
SG IR +FL F+ + HK+LPSASLVPEDPTVLLTIAGML FKPIFLG+ PRA T
Sbjct: 9 SGSDIRDKFLKFFEEKQHKILPSASLVPEDPTVLLTIAGMLPFKPIFLGQQKAPQPRATT 68
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
SQ+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFK++AIQWAWE ST FGLP R+ +
Sbjct: 69 SQKCIRTNDIENVGRTARHHTFFEMLGNFSFGDYFKEQAIQWAWELSTEVFGLPPERIVV 128
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
SV+E+DDEAF IW +G+P I+RMG DDNFW SG TGPCGPCSE+YYDFHP+ G
Sbjct: 129 SVFEEDDEAFAIWRDRIGIPAHRIQRMGEDDNFWVSGPTGPCGPCSELYYDFHPELGDKK 188
Query: 229 VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDL 288
+DL DDTRFIEFYNLVFMQYN+ DG+L PL+ KNIDTG+GLER+A+ILQKVPNNYETDL
Sbjct: 189 IDLEDDTRFIEFYNLVFMQYNRDVDGNLTPLQNKNIDTGMGLERMAQILQKVPNNYETDL 248
Query: 289 IFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLI 348
I PIIK A+E+A V Y +++ T + K+IGDH+RA+V++++DG+ SN RGYV+RRLI
Sbjct: 249 ILPIIKTAAEIAGVDYTKADQTTKTSFKVIGDHVRAVVHMIADGITASNTDRGYVLRRLI 308
Query: 349 RRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELR 408
RR +R GRL+GI EG F+ +AE AI LS +V+ REQ I EL+REE +
Sbjct: 309 RRVIRHGRLIGI--------EGNFINQVAETAISLSESAYPNVRKREQSIKNELQREENQ 360
Query: 409 FVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGV 468
F++TLERGEKLL ++LA ++SG DAF LYDT+GFP+E+T+E+AEE G+
Sbjct: 361 FLKTLERGEKLLAEILAK---------KPQQISGVDAFTLYDTYGFPLELTQEIAEEQGL 411
Query: 469 SVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLSAKAIVESL 527
+VD++GF+ EME QR +++ AH + L+V S D LAE I T+FLGY L A VE+L
Sbjct: 412 TVDVEGFNAEMEQQRDRAREAHQTIDLTVQGSIDQLAEHIHSTQFLGYKQLQVTAKVEAL 471
Query: 528 LVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVKKS 587
LV GK V K G++V+++L++TPFYAESGGQIGD G+L G N ++ ++DV+K
Sbjct: 472 LVEGKSVEKAEAGTEVQIILDQTPFYAESGGQIGDKGYL---SGDN---LLIRIEDVQKE 525
Query: 588 LGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQAG 647
G FVH G I G L V V A +D R+R + +HTATHLLQAAL+KV+ SQAG
Sbjct: 526 SG-FFVHYGKIERGTLAVNDTVNATIDRACRRRLQANHTATHLLQAALRKVVDDSISQAG 584
Query: 648 SLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAMFG 707
SLV FDRLRFDF+ R L E++++E L+N WI +A+ +M L++AK GAIAMFG
Sbjct: 585 SLVDFDRLRFDFHCPRALKAEEIQQVEDLVNSWISEAHEADVNIMPLEEAKAKGAIAMFG 644
Query: 708 EKYGEQVKI 716
EKY +V++
Sbjct: 645 EKYDSEVRV 653
>gi|126660159|ref|ZP_01731277.1| alanyl-tRNA synthetase [Cyanothece sp. CCY0110]
gi|126618524|gb|EAZ89275.1| alanyl-tRNA synthetase [Cyanothece sp. CCY0110]
Length = 879
Score = 775 bits (2002), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/669 (57%), Positives = 502/669 (75%), Gaps = 23/669 (3%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
+G+ IR RFL FYA + H++LPSASL+PEDPTVLLTIAGML FKPIFLG+ PRA T
Sbjct: 9 TGNQIRDRFLQFYAQQNHQILPSASLIPEDPTVLLTIAGMLPFKPIFLGQKQPDFPRATT 68
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
SQ+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFK++AI+WAWE ST + LP + +
Sbjct: 69 SQKCIRTNDIENVGRTARHHTFFEMLGNFSFGDYFKEQAIKWAWELSTQVYQLPPENIVV 128
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
SV+E+DDEAF++W + +G+P + IKRMG DNFW +G TGPCGPCSE+YYDFHP+RG
Sbjct: 129 SVFENDDEAFKLWEEMIGIPPQRIKRMGEKDNFWKAGPTGPCGPCSELYYDFHPERGEES 188
Query: 229 VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDL 288
+DL DD+RFIEFYNLVFM+YN+ +G+L PL++KNIDTG+GLER+A+ILQKVPNNYETDL
Sbjct: 189 IDLEDDSRFIEFYNLVFMEYNRDVEGNLTPLQKKNIDTGMGLERMAQILQKVPNNYETDL 248
Query: 289 IFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLI 348
IFPII+ A+ +AN++Y ++ ++T ++LK+IGDH+R++V+++SDG+ SN RGYV+RRLI
Sbjct: 249 IFPIIETAANIANINYHKATEKTKVSLKVIGDHVRSVVHMISDGITASNTDRGYVLRRLI 308
Query: 349 RRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELR 408
RR VR GRL+GI EG F+ +AE AI+LS V+ RE I EL+REE
Sbjct: 309 RRVVRHGRLIGI--------EGQFINQVAETAIQLSQKAYPQVRERESFIKGELEREETA 360
Query: 409 FVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGV 468
F++TLERGEKL LA+ + +T + G ++SG DAF LYDTFGFP E+T+E+AEE +
Sbjct: 361 FLKTLERGEKL----LAEIIEKTEKQG---QISGVDAFTLYDTFGFPFELTQEIAEESNL 413
Query: 469 SVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLSAKAIVESL 527
+V++K F+ EM+ Q+ +S+AAH + L+V S D LAE I TEFLGY L A VE++
Sbjct: 414 TVNIKEFEAEMKQQQERSKAAHETIDLTVQGSLDKLAEHIHPTEFLGYTDLQLTAKVEAV 473
Query: 528 LVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVKKS 587
L+ GK V GS+V+++L++TPFY ESGGQIGD GFL G N V+ V DV+K
Sbjct: 474 LIQGKSVDIAEAGSEVQIVLDQTPFYGESGGQIGDRGFLT---GEN---LVIRVDDVQKE 527
Query: 588 LGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQAG 647
G +FVH G + G + + V+A +D R++ + +HTATHLLQAALKKV+ SQAG
Sbjct: 528 SG-IFVHFGRVERGQIAINDNVKATIDRACRRQVQANHTATHLLQAALKKVVDNSISQAG 586
Query: 648 SLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAMFG 707
SLVAFDRLRFDFN R + EL+EIE LIN WI +A+ +T VM L+ AK GAIAMFG
Sbjct: 587 SLVAFDRLRFDFNCPRAVTSEELQEIEDLINTWIAEAHDTETAVMPLETAKEKGAIAMFG 646
Query: 708 EKYGEQVKI 716
EKY +V++
Sbjct: 647 EKYSAEVRV 655
>gi|428781410|ref|YP_007173196.1| alanine--tRNA ligase [Dactylococcopsis salina PCC 8305]
gi|428695689|gb|AFZ51839.1| alanine--tRNA ligase [Dactylococcopsis salina PCC 8305]
Length = 876
Score = 775 bits (2001), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/669 (58%), Positives = 508/669 (75%), Gaps = 25/669 (3%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
SG+ IR+ FLDFYA RGH+VLPSASLVPEDPTVLLTIAGML FKPIFLG+ RA T
Sbjct: 9 SGNQIRQTFLDFYAKRGHEVLPSASLVPEDPTVLLTIAGMLPFKPIFLGQKTAPYNRATT 68
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
SQ+CIRTND+ENVGRT RHHTFFEMLGNFSFGDYFK+EAI+WAWE ST FGL RL
Sbjct: 69 SQKCIRTNDIENVGRTKRHHTFFEMLGNFSFGDYFKEEAIKWAWELSTKGFGLAPERLIP 128
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
SVY++D+EAF IW ++G+ + I+RMG +DNFW +G TGPCGPCSEIYYDFHP+ G +
Sbjct: 129 SVYKEDEEAFAIWRDQIGIAPQRIQRMGEEDNFWAAGPTGPCGPCSEIYYDFHPELGDEN 188
Query: 229 VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDL 288
+DL DD+RFIEFYNLVFMQ+N+ +G+L PL+ +NIDTGLGLER+A+ILQ+VPNNYETDL
Sbjct: 189 IDLEDDSRFIEFYNLVFMQFNRDSEGNLTPLQNQNIDTGLGLERMAQILQQVPNNYETDL 248
Query: 289 IFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLI 348
IFPIIK + +A++ Y+Q++++ ++LK+IGDH+RA+V+L++DGV SN+GRGYV+RRLI
Sbjct: 249 IFPIIKTVATIADLDYSQADEKQQVSLKVIGDHVRAVVHLIADGVTASNLGRGYVLRRLI 308
Query: 349 RRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELR 408
RR VR GRLLGI + F P +AE AI L S+++ E I +ELKREE R
Sbjct: 309 RRVVRHGRLLGINRE--------FTPEVAETAIALMEGHYSNLREGEVLIKQELKREESR 360
Query: 409 FVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGV 468
F++TLERGEKLL ++L +ES ++SG+DAF+LYDT+GFP+E+T+EVAEE G+
Sbjct: 361 FLETLERGEKLLGEIL------EKES---KQISGEDAFVLYDTYGFPLELTQEVAEEKGL 411
Query: 469 SVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLSAKAIVESL 527
+VD+ GF+ EME QR++SQAA + L++ S D LA+ + TEF+GY + A VE++
Sbjct: 412 TVDLDGFEEEMEKQRQRSQAAQETIDLTIQGSIDQLAQTVHPTEFVGYGNPHSTAQVEAV 471
Query: 528 LVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVKKS 587
LV GK V + G V+++LN+TPFYAESGGQIGD G+L QG N ++ ++DV+K
Sbjct: 472 LVEGKTVQEAEAGEQVQLILNQTPFYAESGGQIGDRGYL---QGEN---LLIRIEDVQKE 525
Query: 588 LGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQAG 647
S+F+H G I G++ VG V A +D R+RA HHTATHLLQAALK++I SQAG
Sbjct: 526 -SSLFIHIGRIERGMVRVGDTVTATIDRACRRRAAAHHTATHLLQAALKQIIDPSVSQAG 584
Query: 648 SLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAMFG 707
SLVAFDRLRFDFN R + EL+++E IN WI +A+ Q+ VMA D+AK+ GAIAMFG
Sbjct: 585 SLVAFDRLRFDFNCPRQITREELQQVEDTINTWIAEAHETQSDVMAFDEAKQKGAIAMFG 644
Query: 708 EKYGEQVKI 716
EKY + V++
Sbjct: 645 EKYDDVVRV 653
>gi|332706959|ref|ZP_08427019.1| alanyl-tRNA synthetase [Moorea producens 3L]
gi|332354224|gb|EGJ33704.1| alanyl-tRNA synthetase [Moorea producens 3L]
Length = 876
Score = 775 bits (2000), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/675 (57%), Positives = 501/675 (74%), Gaps = 27/675 (4%)
Query: 45 DFPS--SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQ 102
D P+ G+ IR+ FLDFY+ R H+VLPSASLVPEDPTVLLTIAGML FKPIFLG+ +
Sbjct: 3 DIPNYLRGNEIRQTFLDFYSQRQHQVLPSASLVPEDPTVLLTIAGMLPFKPIFLGQRQSE 62
Query: 103 VPRAATSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLP 162
PRA T+Q+CIR ND+ENVGRT+RHHTFFEMLGNFSFGDYFK++AI WAWE ST FGLP
Sbjct: 63 FPRATTAQKCIRNNDIENVGRTARHHTFFEMLGNFSFGDYFKEQAIAWAWELSTEVFGLP 122
Query: 163 ANRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHP 222
RL +SV+ DDDEAF IW ++G+P I+R+G +DN+W SG TGPCGPCSEIYYDFHP
Sbjct: 123 PERLVVSVFRDDDEAFGIWRDKIGIPAHRIQRLGEEDNYWKSGPTGPCGPCSEIYYDFHP 182
Query: 223 DRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPN 282
+ G +DL DDTRFIEFYNLVFM+YN+ +G+ PL+++NIDTG+GLER+A+ILQ+VPN
Sbjct: 183 ELGDESIDLEDDTRFIEFYNLVFMEYNQDAEGNRTPLEKQNIDTGMGLERMAQILQQVPN 242
Query: 283 NYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGY 342
NYETDLIFPI+K A+E+A V+Y++S+ +T ++LK+IGDH+RAIV++++DG+ SN GRGY
Sbjct: 243 NYETDLIFPIVKTAAEIAGVNYSKSDQKTKVSLKVIGDHIRAIVHMIADGITASNTGRGY 302
Query: 343 VVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEEL 402
V+RRL+RR VR GRL+GI G+ F +A+ AI LS +V+ RE+ I E+
Sbjct: 303 VLRRLLRRVVRHGRLIGIDGE--------FTWEVAQTAIALSESAYPNVREREKTIKAEM 354
Query: 403 KREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEV 462
+REE +F++TLERGEKLL ++LA ++SG DAF LYDT+GFPVE+T+E+
Sbjct: 355 QREESQFLKTLERGEKLLAEILAK---------KPKQISGTDAFTLYDTYGFPVELTEEI 405
Query: 463 AEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLSAK 521
AEE G++VD+ GF++EME QR +++ AH + L+V S D L E I T FLGY +
Sbjct: 406 AEEQGLTVDLDGFEVEMERQRERARVAHETIDLTVQGSLDQLGEHIHSTAFLGYTEPQSM 465
Query: 522 AIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEV 581
A VE+LLV+GK V GS V+V+L++TPFYAESGGQIGD G+L + + +V +
Sbjct: 466 AKVEALLVDGKSVESAGAGSKVQVILDQTPFYAESGGQIGDRGYL------SGDSLLVRI 519
Query: 582 KDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQ 641
+DV+K FVH GT+ G L VG V A +D R+R + +H+ATHLLQAALK+++
Sbjct: 520 EDVQKE-SDFFVHFGTVERGNLAVGTTVTAQIDRACRRRVQANHSATHLLQAALKRIVDP 578
Query: 642 ETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAG 701
SQAGSLVAFDRLRFDFN R L ELE+IE +N WI +A+ +VM L AK G
Sbjct: 579 SISQAGSLVAFDRLRFDFNCPRALTSEELEQIEAQVNTWISEAHTADVEVMPLTKAKAKG 638
Query: 702 AIAMFGEKYGEQVKI 716
A AMFGEKYG++V++
Sbjct: 639 ATAMFGEKYGDEVRV 653
>gi|427729614|ref|YP_007075851.1| alanyl-tRNA synthetase [Nostoc sp. PCC 7524]
gi|427365533|gb|AFY48254.1| alanyl-tRNA synthetase [Nostoc sp. PCC 7524]
Length = 880
Score = 774 bits (1999), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/669 (57%), Positives = 503/669 (75%), Gaps = 21/669 (3%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
SG+ IR +FL+F+A RGH++LPSASLVPEDPTVLLTIAGML FKPIFLG+ + RA T
Sbjct: 9 SGNEIRTQFLNFFAQRGHQILPSASLVPEDPTVLLTIAGMLPFKPIFLGQRTPEFNRATT 68
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
SQ+CIRTND+ENVGRT RHHTFFEMLGNFSFGDYFK++AI W WE ST FGLP RL +
Sbjct: 69 SQKCIRTNDIENVGRTKRHHTFFEMLGNFSFGDYFKEQAIAWGWEISTTVFGLPKERLVV 128
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
SV+E+DDEAF IW ++GVP IKRMGADDNFW SG TGPCGPCSEIYYDFHP+RG +
Sbjct: 129 SVFEEDDEAFAIWRDQIGVPAARIKRMGADDNFWVSGPTGPCGPCSEIYYDFHPERGDDN 188
Query: 229 VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDL 288
+DL DDTRFIEFYNLVFMQYN+ +G+L PL+ KNIDTG+GLER+A+ILQ+VPNNYETDL
Sbjct: 189 IDLEDDTRFIEFYNLVFMQYNRDAEGNLTPLQNKNIDTGMGLERMAQILQQVPNNYETDL 248
Query: 289 IFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLI 348
IFPII+ A+++A ++Y S++ T ++LK+IGDH+R++V++++D + SN+GRGY++RRLI
Sbjct: 249 IFPIIETAAKIAGINYHDSDENTKVSLKVIGDHVRSVVHMIADEIRASNVGRGYILRRLI 308
Query: 349 RRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELR 408
RR VR GRL+GI G+ F+ +AE AI LS +V+ RE I EL+REE
Sbjct: 309 RRVVRHGRLIGITGE--------FINQVAETAIALSESAYPNVRQREAGIKAELQREEAN 360
Query: 409 FVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGV 468
F++TL+RGEKLL++++ + + +SG+ AF LYDT+GFP+E+T+E+AEE+ +
Sbjct: 361 FLKTLDRGEKLLEEIIQQVKQQGQTQ-----ISGESAFTLYDTYGFPLELTQEIAEENHL 415
Query: 469 SVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLSAKAIVESL 527
+VD GF+IEM+ Q +++AAH + L+V S D LAE I TEF+GY+ +A A VE L
Sbjct: 416 TVDETGFNIEMQKQVERAKAAHETIDLTVQGSLDKLAEHIHATEFIGYEQPAATAQVEVL 475
Query: 528 LVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVKKS 587
LV G + G+DV+++LN+TPFYAESGGQIGD G++ + VV V+DVKK
Sbjct: 476 LVGGVSQEEAEAGTDVQIVLNQTPFYAESGGQIGDRGYI------SGDGVVVRVEDVKKE 529
Query: 588 LGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQAG 647
FVH G I G L VG V A +D R+RA+ +HTATHLLQAALKK + + SQAG
Sbjct: 530 -SDFFVHFGRIERGTLRVGDTVTAQIDRACRRRAQANHTATHLLQAALKKFVDEGISQAG 588
Query: 648 SLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAMFG 707
SLV+FDRLRFDFN R L E++++E IN WI +A+ + +V+ L +AK GA+AMFG
Sbjct: 589 SLVSFDRLRFDFNCPRALTPEEIQQVEEQINTWIAEAHSAKVEVLPLAEAKARGAVAMFG 648
Query: 708 EKYGEQVKI 716
EKYG++V++
Sbjct: 649 EKYGDEVRV 657
>gi|428202632|ref|YP_007081221.1| alanyl-tRNA synthetase [Pleurocapsa sp. PCC 7327]
gi|427980064|gb|AFY77664.1| alanyl-tRNA synthetase [Pleurocapsa sp. PCC 7327]
Length = 877
Score = 773 bits (1997), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/669 (57%), Positives = 503/669 (75%), Gaps = 25/669 (3%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
SG IR++FLDFYA R HK+LPSASL+PEDPTVLLTIAGML FKPIFLG+ PRA T
Sbjct: 9 SGSEIRQKFLDFYAQRQHKILPSASLIPEDPTVLLTIAGMLPFKPIFLGQKTPDYPRATT 68
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
SQ+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFK+EAI WAWE ST FGLP RL
Sbjct: 69 SQKCIRTNDIENVGRTARHHTFFEMLGNFSFGDYFKEEAIAWAWELSTEVFGLPPERLIP 128
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
SV+E+DDEAF IW+ ++G+P IKRMGADDNFW SG TGPCGPCSEIYYDFHP+ G +
Sbjct: 129 SVFEEDDEAFAIWHDKIGIPPHRIKRMGADDNFWVSGPTGPCGPCSEIYYDFHPELGDEN 188
Query: 229 VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDL 288
+DL DD+RFIEFYNLVFMQYN+ G+L PL+ KNIDTG+GLER+A+ILQ+VPNNYETDL
Sbjct: 189 IDLEDDSRFIEFYNLVFMQYNRDAQGNLTPLQSKNIDTGMGLERMAQILQQVPNNYETDL 248
Query: 289 IFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLI 348
IFPI+K A+E+A + Y++++++T ++LK+IGDH+RA+V++++DG+ SNIGRGYV+RRLI
Sbjct: 249 IFPIVKTAAEIAGIDYSKADEKTKVSLKVIGDHIRAVVHMIADGISASNIGRGYVLRRLI 308
Query: 349 RRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELR 408
RR VR GR LGI EG F P +AE AI L+ + +V A E+ I +L+REE
Sbjct: 309 RRVVRHGRSLGI--------EGVFTPQVAEVAIALAKDVYPNVIATEEDIKGQLQREESA 360
Query: 409 FVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGV 468
F++T+E+GEKLL ++L ++SG+DAF LYDT GFP+E+T+E+A E+ +
Sbjct: 361 FLKTIEKGEKLLTEILQKEKQ---------QISGEDAFTLYDTHGFPLELTQEIAAENSL 411
Query: 469 SVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLSAKAIVESL 527
+VD++GF+ EME QR++ + +H + L+V S D LAE I TEF+GY + A VE++
Sbjct: 412 TVDVEGFEREMEKQRQRGRESHKTIDLTVQGSLDKLAEHIHSTEFVGYTQSQSTAKVEAV 471
Query: 528 LVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVKKS 587
LV+GK V G V+++L++TPFYAESGGQIGD G+L + +V ++DV+K
Sbjct: 472 LVDGKTVEAAEAGEQVQIVLDKTPFYAESGGQIGDRGYL------TGENLLVRIEDVQKE 525
Query: 588 LGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQAG 647
FVH G + G++++G V A +D R+RA+ +HTATHLLQAALKK++ SQAG
Sbjct: 526 -SDFFVHFGRVERGIIQIGDTVTAQIDRACRRRAQANHTATHLLQAALKKIVDDSISQAG 584
Query: 648 SLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAMFG 707
SLVAFDRLRFDFN R L EL++IE IN WI +A+ Q +M L++AK GAIAMFG
Sbjct: 585 SLVAFDRLRFDFNCPRALTQEELQQIEEQINTWIAEAHDAQISIMPLEEAKTKGAIAMFG 644
Query: 708 EKYGEQVKI 716
EKYG QV++
Sbjct: 645 EKYGAQVRV 653
>gi|334121306|ref|ZP_08495378.1| alanyl-tRNA synthetase [Microcoleus vaginatus FGP-2]
gi|333455241|gb|EGK83896.1| alanyl-tRNA synthetase [Microcoleus vaginatus FGP-2]
Length = 883
Score = 773 bits (1996), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/669 (57%), Positives = 505/669 (75%), Gaps = 18/669 (2%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
SG IR+ FLDFYA RGHK+LPSASLVPEDPTVLLTIAGMLQFKPIFLG+ + PRA T
Sbjct: 9 SGSQIRQTFLDFYAQRGHKMLPSASLVPEDPTVLLTIAGMLQFKPIFLGQRTAESPRATT 68
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
SQ+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFKK+AI WAWE ST FGLPA+ L +
Sbjct: 69 SQKCIRTNDIENVGRTARHHTFFEMLGNFSFGDYFKKQAIAWAWELSTEVFGLPASNLVV 128
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
SV+ +DDEAF IW E+G+P + I+RMG DDNFW SG TGPCGPCSEIYYDF+P+RG +
Sbjct: 129 SVFREDDEAFAIWRDEIGIPGDRIQRMGEDDNFWQSGPTGPCGPCSEIYYDFYPERG-DN 187
Query: 229 VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDL 288
+DL DD+RFIEFYNLVFMQYNK +G+L PL+ +NIDTGLGLER+A+ILQKVPNNYETDL
Sbjct: 188 IDLEDDSRFIEFYNLVFMQYNKDAEGNLTPLQNQNIDTGLGLERMAQILQKVPNNYETDL 247
Query: 289 IFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLI 348
IFPII+ A+E+A + Y S+++ ++LK+IGDH+RA+V++++D + SN+GRGY++RRLI
Sbjct: 248 IFPIIQSAAEIAGIDYHNSDEKVKVSLKVIGDHIRAVVHMIADEIRASNVGRGYILRRLI 307
Query: 349 RRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELR 408
RR VR GRL+GI+G+ F +AE AI LS +V+ RE +I EL REE +
Sbjct: 308 RRVVRHGRLIGIQGE--------FTVRVAESAIALSEAAYPNVRQREAQIKAELAREEAQ 359
Query: 409 FVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGV 468
F++TLERGEKLL+++ + T++ + ++SGQDAF LYDT+GFP+E+T+E+AEE G+
Sbjct: 360 FLKTLERGEKLLEEI----VDHTKQQAN-QQISGQDAFTLYDTYGFPLELTQEIAEEQGI 414
Query: 469 SVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLSAKAIVESL 527
SVD+ GF+ M+ Q+ +++ A + L+V S D LAE I TEF+GY LS+ A VE +
Sbjct: 415 SVDLDGFERAMKEQQTRAKDARQTIDLTVQGSLDKLAETIQGTEFVGYAELSSLAEVEVI 474
Query: 528 LVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVKKS 587
LV+GK V + + G++V+V+LN+TPFYAESGGQIGD G Y+ G N +V V DVKK
Sbjct: 475 LVDGKSVEEAAAGTEVQVVLNQTPFYAESGGQIGDKG--YLKSGDNGDGLLVRVDDVKKE 532
Query: 588 LGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQAG 647
FVH G + G L VG + A +D R+R + +HTATHLLQ+AL+K++ SQAG
Sbjct: 533 -SDFFVHFGFVERGTLRVGDSITAKIDNSGRRRIQANHTATHLLQSALRKIVDDSISQAG 591
Query: 648 SLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAMFG 707
SLV+ +RLRFDFN R + EL++IE L+N WI +A+ M + A+ GA AMFG
Sbjct: 592 SLVSSERLRFDFNSPRAVTAEELQKIEDLVNSWIAEAHAAVVAEMPIALAREKGATAMFG 651
Query: 708 EKYGEQVKI 716
EKYG+ V++
Sbjct: 652 EKYGDVVRV 660
>gi|428205107|ref|YP_007089460.1| alanyl-tRNA synthetase [Chroococcidiopsis thermalis PCC 7203]
gi|428007028|gb|AFY85591.1| alanyl-tRNA synthetase [Chroococcidiopsis thermalis PCC 7203]
Length = 882
Score = 773 bits (1996), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/670 (57%), Positives = 503/670 (75%), Gaps = 17/670 (2%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
SG+ IR++FL+FY+ RGH++L SASLVPEDPTVLLTIAGML FKPIFLG+ + RA +
Sbjct: 5 SGNEIRQKFLEFYSQRGHQILASASLVPEDPTVLLTIAGMLPFKPIFLGQRSPEFKRATS 64
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
SQ+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFK++AI W WE ST FGLP RL
Sbjct: 65 SQKCIRTNDIENVGRTARHHTFFEMLGNFSFGDYFKEQAIAWGWEISTTVFGLPPERLVA 124
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
SV+E DDEA+ IW ++GVP IKRMG DDNFW SG TGPCGPCSEIYYDFHP+RG ++
Sbjct: 125 SVFESDDEAYAIWRDKIGVPEARIKRMGEDDNFWYSGPTGPCGPCSEIYYDFHPERGDAN 184
Query: 229 VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDL 288
+DL DDTRFIEFYNLVFMQYN+ +G+L PL +KNIDTG+GLER+A+ILQKVPNNYETDL
Sbjct: 185 IDLEDDTRFIEFYNLVFMQYNRDAEGNLTPLAKKNIDTGMGLERMAQILQKVPNNYETDL 244
Query: 289 IFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLI 348
IFPIIK A+E+A + Y +++T ++LK+IGDH+RA++++++D + SN GRGYV+RRLI
Sbjct: 245 IFPIIKTAAEIAGIDYNNCDEKTKVSLKVIGDHIRAVMHMIADEIRASNTGRGYVLRRLI 304
Query: 349 RRAVRTGRLLGI-KGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREEL 407
RR VR GRL+G+ + D N+ F P + E AI LS +V+ RE +I EL+REE
Sbjct: 305 RRVVRHGRLIGVYRRDVTCNV---FTPEVVETAIALSESAYPNVRVREAQIKAELQREES 361
Query: 408 RFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHG 467
+F++TLERGEKLLD+++ A + + ++SG+ AF LYDT+GFP+E+T+EVAEE+
Sbjct: 362 QFLKTLERGEKLLDEIIEIAKQQKQ-----TQISGESAFTLYDTYGFPLELTQEVAEEYN 416
Query: 468 VSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLSAKAIVES 526
++VD+ F++EME QR +++ AH + L+V S D LAE I TEF+GY A A ++
Sbjct: 417 LTVDVDSFEVEMEKQRERAKEAHETIDLTVQGSLDKLAEHIHATEFVGYTQPVATAEIKV 476
Query: 527 LLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVKK 586
LL+ G+ V + G DV+++L++TPFYAESGGQIGD G+L + +V ++DVKK
Sbjct: 477 LLMAGQCVEEAEAGQDVQIVLDKTPFYAESGGQIGDRGYL------SGDAILVRIEDVKK 530
Query: 587 SLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQA 646
FVH G I G L VG +V A +D R+RA+ +H+ATHLLQAALKK++ SQA
Sbjct: 531 E-SDFFVHFGRIERGTLRVGDKVTAQIDRACRRRAQANHSATHLLQAALKKIVDDSISQA 589
Query: 647 GSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAMF 706
GSLV F +LRFDFN RP+ EL++IE IN WI +A+ + ++ L +AK GA+AMF
Sbjct: 590 GSLVDFTKLRFDFNCPRPVTPDELQQIEETINTWIAEAHTAEISILPLAEAKARGAVAMF 649
Query: 707 GEKYGEQVKI 716
GEKYGE+V++
Sbjct: 650 GEKYGEEVRV 659
>gi|411116424|ref|ZP_11388911.1| alanyl-tRNA synthetase [Oscillatoriales cyanobacterium JSC-12]
gi|410712527|gb|EKQ70028.1| alanyl-tRNA synthetase [Oscillatoriales cyanobacterium JSC-12]
Length = 875
Score = 773 bits (1995), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/671 (57%), Positives = 500/671 (74%), Gaps = 23/671 (3%)
Query: 47 PSSGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRA 106
P +G IR+ FLDF+AS+GH++LPSASLVPEDPTVLLTIAGML FKPIFLG+ + PRA
Sbjct: 4 PLTGAQIRQTFLDFFASKGHQILPSASLVPEDPTVLLTIAGMLPFKPIFLGQRAAEFPRA 63
Query: 107 ATSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRL 166
T+Q+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFK +AI WAWE ST FGLP R+
Sbjct: 64 TTAQKCIRTNDIENVGRTARHHTFFEMLGNFSFGDYFKSQAIAWAWELSTQVFGLPPERI 123
Query: 167 WISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGC 226
+SV+E+DDEAF IW E+G+P I+RMGADDNFW SG TGPCGPCSE+YYDF P+ G
Sbjct: 124 VVSVFEEDDEAFAIWRDEIGIPAHRIQRMGADDNFWVSGPTGPCGPCSELYYDFKPELGD 183
Query: 227 SDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYET 286
+DL DD+RFIEFYNLVFMQYN+ D +L PL+ KNIDTG+GLER+A+ILQKVPNNYET
Sbjct: 184 DHIDLEDDSRFIEFYNLVFMQYNRDVDNNLTPLQSKNIDTGMGLERMAQILQKVPNNYET 243
Query: 287 DLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRR 346
DLIFPI+K A+E+A + Y ++++ T + LK+IGDH+RA+V++L+DG+ SN GRGYV+RR
Sbjct: 244 DLIFPIVKTAAEIAGIDYHKADEPTKVALKVIGDHIRAVVHMLADGITVSNEGRGYVLRR 303
Query: 347 LIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREE 406
LIRR +R GRL+GI + F P +AE AI LS V+ E I L+REE
Sbjct: 304 LIRRVIRYGRLIGINKE--------FTPQVAETAIALSEEAYPHVRQMELSIKVALQREE 355
Query: 407 LRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEH 466
+RF++TLE GE+ L+ + + + G +P G++AF+LYDT+GFP+E+T+E+A E
Sbjct: 356 VRFLKTLEFGERELETL----IQKIGAGGQIP---GENAFVLYDTYGFPLELTQEIAAEK 408
Query: 467 GVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLSAKAIVE 525
G++VD+KGF+ EME QR++S+ A + L+V S + LAE I +TEFLGY SA+A V+
Sbjct: 409 GMTVDVKGFETEMEKQRQRSRNAVETIDLTVQGSLNQLAEHIHETEFLGYTQPSAEAEVQ 468
Query: 526 SLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVK 585
+L++ G V GS+V+V+L++TPFYAESGGQIGD G+L G N +V V+DV+
Sbjct: 469 ALMIGGHAVAMAEAGSEVQVILDQTPFYAESGGQIGDRGYL---SGDN---VLVRVEDVQ 522
Query: 586 KSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQ 645
K G FVH G I G L V V A +D R+RA+ +HTATHLLQ+ALK+++ SQ
Sbjct: 523 KESG-FFVHYGRIERGTLHVADVVNAQIDLACRRRAQANHTATHLLQSALKQIVDDSISQ 581
Query: 646 AGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAM 705
AGSLVAFDRLRFDF+ RPL EL++IE IN WI +A+ QT + L +AK GAIAM
Sbjct: 582 AGSLVAFDRLRFDFHCPRPLTTDELQQIEDQINTWIAEAHTAQTYTLPLAEAKARGAIAM 641
Query: 706 FGEKYGEQVKI 716
FGEKYG +V++
Sbjct: 642 FGEKYGSEVRV 652
>gi|172036637|ref|YP_001803138.1| alanyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
gi|354554451|ref|ZP_08973755.1| alanyl-tRNA synthetase [Cyanothece sp. ATCC 51472]
gi|205830042|sp|B1WYQ5.1|SYA_CYAA5 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|171698091|gb|ACB51072.1| alanyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
gi|353553260|gb|EHC22652.1| alanyl-tRNA synthetase [Cyanothece sp. ATCC 51472]
Length = 879
Score = 770 bits (1988), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/669 (57%), Positives = 499/669 (74%), Gaps = 23/669 (3%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
+G+ IR RFL FYA H++LPSASLVPEDPTVLLTIAGML FKPIFLG+ PRA T
Sbjct: 9 TGNQIRDRFLQFYAQHNHQILPSASLVPEDPTVLLTIAGMLPFKPIFLGQKQPDFPRATT 68
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
SQ+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFK++AI+WAWE ST + LP + +
Sbjct: 69 SQKCIRTNDIENVGRTARHHTFFEMLGNFSFGDYFKEQAIKWAWELSTKVYRLPPENIVV 128
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
SV+E DDEAF++W + +G+P + IKRMG DNFW +G TGPCGPCSE+YYDFHP+ G +
Sbjct: 129 SVFEKDDEAFKLWEEMIGIPPQRIKRMGEKDNFWKAGPTGPCGPCSELYYDFHPELGEDN 188
Query: 229 VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDL 288
+DL DD+RFIEFYNLVFM+YN+ +G+L PL+ KNIDTG+GLER+A+ILQKVPNNYETDL
Sbjct: 189 IDLEDDSRFIEFYNLVFMEYNRDAEGNLAPLQNKNIDTGMGLERMAQILQKVPNNYETDL 248
Query: 289 IFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLI 348
IFPII+ A+ +AN+ Y ++ ++T ++LK+IGDH+R++V++++DG+ SN RGYV+RRLI
Sbjct: 249 IFPIIETAANIANIDYQKATEKTKVSLKVIGDHVRSVVHMIADGITASNTDRGYVLRRLI 308
Query: 349 RRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELR 408
RR VR GRL+GI EG F+ +AE AIELS + V+ RE I EL+REE
Sbjct: 309 RRVVRHGRLIGI--------EGQFIKQVAETAIELSENAYPQVRERESFIKGELEREETA 360
Query: 409 FVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGV 468
F++TLERGEKL LA+ + +T G ++SG DAF LYDT+GFP+E+T+E+AEE +
Sbjct: 361 FLKTLERGEKL----LAEIIEKTETQG---QISGVDAFTLYDTYGFPLELTQEIAEESNL 413
Query: 469 SVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLSAKAIVESL 527
+V+++ F+ EM Q+ +S+AAH + L+V S D LAE I T FLGY L A VE++
Sbjct: 414 TVNIEEFEAEMRQQQERSKAAHETIDLTVQGSLDKLAEHIHPTAFLGYTDLQLTAKVEAV 473
Query: 528 LVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVKKS 587
L+ GK V GS+V+++L++TPFY ESGGQIGD GFL G N V+ V+DV+K
Sbjct: 474 LIQGKTVDTAEAGSEVQIVLDQTPFYGESGGQIGDRGFL---TGEN---LVIRVEDVQKE 527
Query: 588 LGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQAG 647
G +FVH G + G + V +V A +D R++ + +HTATHLLQAALKKV+ + SQAG
Sbjct: 528 SG-IFVHFGRVERGSVSVNDQVTATIDRACRRQVQANHTATHLLQAALKKVVDKSISQAG 586
Query: 648 SLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAMFG 707
SLVAFDRLRFDFN R + EL+EIE LIN WI +A+ + VM ++ AK GAIAMFG
Sbjct: 587 SLVAFDRLRFDFNCPRAVTSEELQEIEDLINTWIAEAHETEIAVMPIETAKEKGAIAMFG 646
Query: 708 EKYGEQVKI 716
EKYG +V++
Sbjct: 647 EKYGSEVRV 655
>gi|443321755|ref|ZP_21050797.1| alanyl-tRNA synthetase [Gloeocapsa sp. PCC 73106]
gi|442788525|gb|ELR98216.1| alanyl-tRNA synthetase [Gloeocapsa sp. PCC 73106]
Length = 878
Score = 770 bits (1988), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/669 (56%), Positives = 496/669 (74%), Gaps = 25/669 (3%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
SG+ IR++FL FYA R H +LPSASL+PEDPTVLLTIAGML FKPIFLG+ + PRA T
Sbjct: 9 SGNQIREKFLMFYAQREHAILPSASLIPEDPTVLLTIAGMLPFKPIFLGQKTSEYPRATT 68
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
SQ+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFK++AI WAWE +T F LP RL +
Sbjct: 69 SQKCIRTNDIENVGRTARHHTFFEMLGNFSFGDYFKEQAIAWAWELATEIFALPPERLVV 128
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
SV+ +D+EA IW ++GV + +M DNFW SG TGPCGPCSEIYYDFHP+RG +
Sbjct: 129 SVFREDEEALAIWRDKIGVSPSRLVKMDEADNFWQSGPTGPCGPCSEIYYDFHPERGDTV 188
Query: 229 VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDL 288
+DL DDTRFIEFYNLVFMQYN+ DG+L PL+ KNIDTGLGLER+A+ILQKVPNNYETDL
Sbjct: 189 IDLEDDTRFIEFYNLVFMQYNRDADGNLTPLQAKNIDTGLGLERMAQILQKVPNNYETDL 248
Query: 289 IFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLI 348
I PII A+ A + Y ++ + ++LK+IGDH+RA+V++++DG+ +NIGRGYV+RRLI
Sbjct: 249 ILPIITTAATRAGLKYQEATEEQKVSLKVIGDHVRAVVHMIADGISATNIGRGYVLRRLI 308
Query: 349 RRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELR 408
RR VR GRLLGI E AF+ +A+ AIE I +++ RE+ IL E+ REE R
Sbjct: 309 RRVVRHGRLLGI--------EKAFVTVVAQTAIEQGAEIYPNLRNREEIILAEIAREEAR 360
Query: 409 FVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGV 468
F++TLERGEKLL ++LA ++SG DAF LYDT+GFP+E+T+E+A E+ +
Sbjct: 361 FLETLERGEKLLSEILAK---------QEQQISGVDAFTLYDTYGFPLELTQEIATENNM 411
Query: 469 SVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLSAKAIVESL 527
+VD++ F+ EM+ QR++SQ+AH + L++ S D LA I TEF+GY A+A V ++
Sbjct: 412 TVDIEAFETEMKQQRQRSQSAHETIDLTIQGSLDQLAASIHPTEFVGYAQNQAQAKVTAI 471
Query: 528 LVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVKKS 587
LV GK V G++++++L++TPFYAESGGQ GD G+L G N V+ + DV+K
Sbjct: 472 LVAGKSVEIAEAGTELQIVLDQTPFYAESGGQTGDRGYL----GGN--NLVIRISDVQKE 525
Query: 588 LGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQAG 647
G +F+H G I GV++VG + A +D R+R + HHTATHLLQAALKK++G+ SQAG
Sbjct: 526 SG-MFIHFGRIERGVIQVGDTITASIDRACRRRVQAHHTATHLLQAALKKIVGESVSQAG 584
Query: 648 SLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAMFG 707
SLVAFDRLRFDFN R L + EL+++E +N WI +A+ QT+VM + +AK GAIAMFG
Sbjct: 585 SLVAFDRLRFDFNCPRALTEAELQQVEDQVNTWIAEAHYTQTEVMPISEAKAKGAIAMFG 644
Query: 708 EKYGEQVKI 716
EKYG V++
Sbjct: 645 EKYGASVRV 653
>gi|443313915|ref|ZP_21043525.1| alanyl-tRNA synthetase [Synechocystis sp. PCC 7509]
gi|442776328|gb|ELR86611.1| alanyl-tRNA synthetase [Synechocystis sp. PCC 7509]
Length = 877
Score = 769 bits (1986), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/668 (57%), Positives = 494/668 (73%), Gaps = 24/668 (3%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
SG+ IR +FLDFYA++ H++LPSASLVPEDPTVLLTIAGMLQFKPIFLG+ + RA T
Sbjct: 9 SGNDIRTKFLDFYANKQHQILPSASLVPEDPTVLLTIAGMLQFKPIFLGQRQSEYKRATT 68
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
SQ+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFK++AI W WE ST FGL L +
Sbjct: 69 SQKCIRTNDIENVGRTARHHTFFEMLGNFSFGDYFKEQAIAWGWELSTQVFGLKPENLVV 128
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
SV+EDDDEAF IW ++GV IKRMG+DDNFW SG TGPCGPCSEIYYDFHP+ G +
Sbjct: 129 SVFEDDDEAFAIWRDKIGVVEARIKRMGSDDNFWVSGPTGPCGPCSEIYYDFHPEHGDEN 188
Query: 229 VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDL 288
+DL DDTRFIEFYNLVFMQYN+ +G+L PL+ KNIDTG+GLER+A+ILQ+VPNNYETDL
Sbjct: 189 IDLEDDTRFIEFYNLVFMQYNRDVEGNLTPLQNKNIDTGMGLERMAQILQQVPNNYETDL 248
Query: 289 IFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLI 348
I PI+K A+E+A + Y QS+++T ++LK+IGDH+RA+V++++DG+ SN+GRGY++RRLI
Sbjct: 249 IKPIVKTAAEIAGIDYVQSDEQTKISLKVIGDHIRAVVHMIADGITASNVGRGYILRRLI 308
Query: 349 RRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELR 408
RR VR GRL+GI+G+ F +A+ AI LS +V+ +E I EL+REE
Sbjct: 309 RRVVRHGRLIGIQGE--------FTTLVAQSAIALSEEAYPNVRTKETVIKNELQREEAN 360
Query: 409 FVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGV 468
F++TL +GEKLL +LA S +SG+DAF+LYDT GFP+E+T+E+A EHG+
Sbjct: 361 FLKTLTKGEKLLADILAK---------SPKEISGKDAFILYDTHGFPLELTQEIAAEHGI 411
Query: 469 SVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTLSAKAIVESLL 528
VD++GF+ EME Q S+ AH + L+ + LA I T+FLGY S A V +L+
Sbjct: 412 KVDVEGFEEEMEIQIGTSKGAHETIDLTANSLNQLASGINATQFLGYTQPSTPAQVMTLI 471
Query: 529 VNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVKKSL 588
NG+ V GS+V+VLL++TPFYAESGGQIGD G+L + + VV + DVK+
Sbjct: 472 ANGQQVEAAEAGSEVQVLLDQTPFYAESGGQIGDRGYL------SGDSVVVAINDVKQQS 525
Query: 589 GSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQAGS 648
G +++H G I G L VG + A +D R RA+ +HTATHLLQAALKK++ SQAGS
Sbjct: 526 G-IYIHYGRIERGTLHVGDPLTAQIDRACRLRAQANHTATHLLQAALKKIVDPSISQAGS 584
Query: 649 LVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAMFGE 708
LVAFDRLRFDFN RP+ EL++IE +N WI +A+ +++ + +AK GAIAMFGE
Sbjct: 585 LVAFDRLRFDFNCPRPITPDELQQIEAQVNTWIAEAHHADIEILPIAEAKAKGAIAMFGE 644
Query: 709 KYGEQVKI 716
KYG+ V++
Sbjct: 645 KYGDVVRV 652
>gi|254415207|ref|ZP_05028969.1| alanyl-tRNA synthetase [Coleofasciculus chthonoplastes PCC 7420]
gi|196178013|gb|EDX73015.1| alanyl-tRNA synthetase [Coleofasciculus chthonoplastes PCC 7420]
Length = 877
Score = 768 bits (1982), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/669 (57%), Positives = 492/669 (73%), Gaps = 25/669 (3%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
SG+ IR++FLDFY R H+VLPSASLVP+DPTVLLTIAGML FKPIFLG+ RA T
Sbjct: 9 SGNQIRQKFLDFYDKRQHQVLPSASLVPDDPTVLLTIAGMLPFKPIFLGQRQSDFSRATT 68
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
SQ+C+RTND+ENVGRT+RHHTFFEMLGNFSFGDYFK++AI WAWE ST F LP RL +
Sbjct: 69 SQKCLRTNDIENVGRTARHHTFFEMLGNFSFGDYFKEQAIAWAWELSTNVFELPPERLIV 128
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
SV+ +DDEAF IW ++G+P I+RMG +DNFW SG TGPCGPCSEIYYDFHP++G D
Sbjct: 129 SVFREDDEAFAIWRDKIGIPAHRIQRMGEEDNFWASGPTGPCGPCSEIYYDFHPEKGDKD 188
Query: 229 VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDL 288
+DL DDTRFIE+YNLVFMQYN+ DG+L PL+ KNIDTGLGLER+A+ILQ+VPNNYETDL
Sbjct: 189 IDLEDDTRFIEYYNLVFMQYNRDADGNLTPLQNKNIDTGLGLERMAQILQQVPNNYETDL 248
Query: 289 IFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLI 348
IFPIIK A+E+A + YA+S+++T ++LK+IGDH+RA+V+L++DG+ SNIGRGY++RRLI
Sbjct: 249 IFPIIKTAAEIAELDYAKSDEKTKVSLKVIGDHIRAVVHLIADGITASNIGRGYILRRLI 308
Query: 349 RRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELR 408
RR VR GRL+GI+G+ F +A+ AI L+ +V+ R I EL+REE +
Sbjct: 309 RRVVRHGRLIGIQGE--------FTTQVADTAIALAEDTYPNVRERNDAIQAELQREESQ 360
Query: 409 FVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGV 468
F +TL RGEKL LAD L++ E ++SG+DAF LYDT GFP+E+T+E+AEEHG+
Sbjct: 361 FRKTLARGEKL----LADILAQKPE-----QISGRDAFTLYDTHGFPLELTQEIAEEHGL 411
Query: 469 SVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLSAKAIVESL 527
+VD+ G++ M+ Q+ SQAAH V L S D + + TEFLGY + A V +L
Sbjct: 412 TVDIAGYEAAMKEQQENSQAAHETVDLLAQGSLDEVTSGVAATEFLGYTVPATTAQVMAL 471
Query: 528 LVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVKKS 587
+ G+ V G++V+V+L++TPFYAESGGQIGD G+L G N VV + DVKK
Sbjct: 472 VAEGESVESAQTGTEVQVVLDQTPFYAESGGQIGDRGYL---SGDN---LVVRIDDVKKE 525
Query: 588 LGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQAG 647
FVH G + G L +G V A +D R+RA+ +HTATHLLQAALKK++ SQAG
Sbjct: 526 -SDFFVHFGRVERGTLNLGDTVTAQIDRACRRRAQANHTATHLLQAALKKIVDPSISQAG 584
Query: 648 SLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAMFG 707
SLVAFDRLRFDFN R L EL +IE IN WI +A+ +M L DAK GAIAMFG
Sbjct: 585 SLVAFDRLRFDFNCSRSLTSEELTQIEDQINTWIAEAHGADVAIMPLTDAKAKGAIAMFG 644
Query: 708 EKYGEQVKI 716
EKY ++V++
Sbjct: 645 EKYADEVRV 653
>gi|443328179|ref|ZP_21056781.1| alanyl-tRNA synthetase [Xenococcus sp. PCC 7305]
gi|442792261|gb|ELS01746.1| alanyl-tRNA synthetase [Xenococcus sp. PCC 7305]
Length = 877
Score = 767 bits (1981), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/669 (56%), Positives = 496/669 (74%), Gaps = 25/669 (3%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
SG IR +FL F+ +R HK+LPSASLVPEDPTVLLTIAGML FKPIFLG+ PRA T
Sbjct: 9 SGSEIRDKFLKFFETRQHKILPSASLVPEDPTVLLTIAGMLPFKPIFLGQEKAPQPRATT 68
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
SQ+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFK++AI WAWE ST + LP +R+ +
Sbjct: 69 SQKCIRTNDIENVGRTARHHTFFEMLGNFSFGDYFKEQAIAWAWELSTQVYKLPPDRIIV 128
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
SV++DDDEAF+IW +G+P I+RMG DNFW SGATGPCGPCSE+YYDFHP+ G +
Sbjct: 129 SVFQDDDEAFDIWRDRLGIPAHRIQRMGEKDNFWKSGATGPCGPCSELYYDFHPELGDQN 188
Query: 229 VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDL 288
+DL DD+RFIE+YNLVFMQYN+ DG+L PL+ KNIDTGLGLER+A+ILQ+VPNNYETDL
Sbjct: 189 IDLEDDSRFIEYYNLVFMQYNRDADGNLAPLENKNIDTGLGLERMAQILQQVPNNYETDL 248
Query: 289 IFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLI 348
IFPIIK A+E+A++ Y +++ +T +LK+IGDH+R++V++++DG+ SN RGYV+RRLI
Sbjct: 249 IFPIIKTAAEIADIDYIKADGKTKTSLKVIGDHVRSVVHMIADGITASNTDRGYVLRRLI 308
Query: 349 RRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELR 408
RR VR GRL+GI EG F+ +AE AI LS +V++R + I EL+REE +
Sbjct: 309 RRVVRHGRLVGI--------EGNFVNQVAETAIALSEVAYPNVRSRSEFIKNELQREESQ 360
Query: 409 FVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGV 468
F++TLERGEKLL ++L ++SG +AF LYDT+GFP+E+T+E+AEE G+
Sbjct: 361 FLKTLERGEKLLAEIL---------EKKPQQISGVEAFTLYDTYGFPLELTQEIAEEQGL 411
Query: 469 SVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLSAKAIVESL 527
+VD+ GF++EME QR +++AAH + L+V S D LAE I TEF GY L + VE++
Sbjct: 412 TVDVDGFNVEMEQQRDRARAAHETIDLTVQGSIDKLAEHIHPTEFSGYSELQSAVKVEAV 471
Query: 528 LVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVKKS 587
LV GKPV G++++V+L+RTPFY ESGGQ+GD G+L G N V+ + DV+K
Sbjct: 472 LVEGKPVEVAEAGAEIQVILDRTPFYGESGGQVGDKGYL---SGDN---LVIRISDVQKE 525
Query: 588 LGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQAG 647
G FVH G + G L+ V A +D R+R + +HTATHLLQAALKK++ SQAG
Sbjct: 526 SG-FFVHYGKVERGTLKTSETVTAKIDRACRRRVQANHTATHLLQAALKKIVDDSISQAG 584
Query: 648 SLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAMFG 707
SLV FDRLRFDFN R L E++++E L+N WI +A+ +MA+ +AK GA AMFG
Sbjct: 585 SLVDFDRLRFDFNSPRGLKPEEVQQVEELVNTWISEAHTADVNIMAIAEAKAKGATAMFG 644
Query: 708 EKYGEQVKI 716
EKYG +V++
Sbjct: 645 EKYGAEVRV 653
>gi|282896478|ref|ZP_06304498.1| Alanyl-tRNA synthetase, class IIc [Raphidiopsis brookii D9]
gi|281198584|gb|EFA73465.1| Alanyl-tRNA synthetase, class IIc [Raphidiopsis brookii D9]
Length = 878
Score = 764 bits (1972), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/669 (56%), Positives = 500/669 (74%), Gaps = 21/669 (3%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
SG+ IR+ FLDFY R H+ LPSASLVPEDPTVLLTIAGML FKPIFLG+ + RA T
Sbjct: 7 SGNHIRQLFLDFYTQRQHQPLPSASLVPEDPTVLLTIAGMLPFKPIFLGQRTAEFKRATT 66
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
SQ+CIRTND+ENVGRT RHHTFFEMLGNFSFGDYFK++AI W WE ST FGLP RL +
Sbjct: 67 SQKCIRTNDIENVGRTKRHHTFFEMLGNFSFGDYFKEQAIAWGWEISTQVFGLPPERLVV 126
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
SV+EDDDEAF IW +++GVP + IKRMGADDNFW SG TGPCGPCSEIYYDFHP+ G
Sbjct: 127 SVFEDDDEAFNIWQQQIGVPEKRIKRMGADDNFWVSGPTGPCGPCSEIYYDFHPELGDDH 186
Query: 229 VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDL 288
+DL DDTRFIEFYNLVFMQYN+ G+L PL+ KNIDTG+GLER+A+ILQKVPNNYETDL
Sbjct: 187 IDLEDDTRFIEFYNLVFMQYNRDISGNLTPLQNKNIDTGMGLERMAQILQKVPNNYETDL 246
Query: 289 IFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLI 348
IFPII+ A+++A ++Y S++ T ++LK+IGDH+RA+V++++D + SN+GRGY++RRLI
Sbjct: 247 IFPIIETAAKIAKINYHDSDENTKVSLKVIGDHVRAVVHMIADEIRASNVGRGYILRRLI 306
Query: 349 RRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELR 408
RR VR GRL+GI G+ F+ +AE AI LS + ++ RE I EL+REE
Sbjct: 307 RRVVRHGRLIGIPGE--------FINQVAETAISLSQSVYPHLRQRETVIKAELQREEGN 358
Query: 409 FVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGV 468
F++TL+RGEKLL +++ + ++ G + +SG+ AF LYDT+GFP+E+T+E+A+E +
Sbjct: 359 FLKTLDRGEKLLGEIIQE----VKQQG-LTVISGESAFTLYDTYGFPLELTQEIAQEQSL 413
Query: 469 SVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLSAKAIVESL 527
SVD++GF+ EM Q +++AAH + L+V S D LAE I TEF+GY L+ A + L
Sbjct: 414 SVDVEGFNTEMHKQIERAKAAHETIDLTVQGSLDKLAEHIHSTEFIGYRQLATTAKIAVL 473
Query: 528 LVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVKKS 587
LV G + G++V+++L++TPFYAESGGQIGD G++ + ++ ++DVKK
Sbjct: 474 LVEGIAQATATGGTNVQIVLDKTPFYAESGGQIGDQGYI------SGDGLLIRIEDVKKE 527
Query: 588 LGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQAG 647
F+H G I G ++VG V A VD R+RA+ +HTATHLLQAALKK++ + SQAG
Sbjct: 528 -SDFFIHFGKIERGTVKVGDSVTAQVDTGNRRRAQANHTATHLLQAALKKIVDEGISQAG 586
Query: 648 SLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAMFG 707
SLV+FDRLRFDFN R L + E++++E L+N WI A+ Q +++ L +AK GA+AMFG
Sbjct: 587 SLVSFDRLRFDFNCSRSLTEDEVQQVEDLVNAWISQAHPAQVEILPLPEAKARGAVAMFG 646
Query: 708 EKYGEQVKI 716
EKYG+ V++
Sbjct: 647 EKYGDHVRV 655
>gi|428212854|ref|YP_007085998.1| alanyl-tRNA synthetase [Oscillatoria acuminata PCC 6304]
gi|428001235|gb|AFY82078.1| alanyl-tRNA synthetase [Oscillatoria acuminata PCC 6304]
Length = 876
Score = 763 bits (1971), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/669 (56%), Positives = 499/669 (74%), Gaps = 25/669 (3%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
SG+ IR +FL+FYA+RGH++LPSASLVPEDPTVLLTIAGML FKPIFLG+ + PRA T
Sbjct: 9 SGNQIRDKFLNFYAARGHQILPSASLVPEDPTVLLTIAGMLPFKPIFLGQRTPEFPRATT 68
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
SQ+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFK++AI +AWE ST +GLP++R+ +
Sbjct: 69 SQKCIRTNDIENVGRTARHHTFFEMLGNFSFGDYFKEQAIAFAWELSTEVYGLPSDRIVV 128
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
SV+ +DDEAF+IW ++G+P IKRM DNFW SG TGPCGPCSE+YYDFHP+ G +
Sbjct: 129 SVFREDDEAFKIWRDKIGIPPHRIKRMDEADNFWASGPTGPCGPCSELYYDFHPELGDDN 188
Query: 229 VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDL 288
+DL DDTRFIEFYNLVFMQYN+ +G+L PL +KNIDTGLGLER+A+ILQKVPNNYETDL
Sbjct: 189 LDLEDDTRFIEFYNLVFMQYNRDAEGNLTPLAKKNIDTGLGLERMAQILQKVPNNYETDL 248
Query: 289 IFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLI 348
IFPI+KKA+++A + YA ++++T ++LK+IGDH RA+V +++DG+ SNIGRGY++RRLI
Sbjct: 249 IFPIVKKAADIAGIDYATADEKTKVSLKVIGDHSRAVVQMIADGITASNIGRGYILRRLI 308
Query: 349 RRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELR 408
RR VR GRL+GI +G F P +AE AI L +++ RE + EL+REE R
Sbjct: 309 RRVVRHGRLIGI--------QGVFTPEVAEAAIALGEGAYPNLRDREASLKAELQREETR 360
Query: 409 FVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGV 468
F++TLERGEKLL +++ + +P G+DAF+LYDT+GFP+E+T+E+ EE G+
Sbjct: 361 FLETLERGEKLLAELM------EKNPKEIP---GRDAFVLYDTYGFPLELTQEIVEERGI 411
Query: 469 SVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLSAKAIVESL 527
+V++ GF+ ME QR +SQAAH + L+V S D LAE I TEFLGY + V +
Sbjct: 412 TVELPGFEAAMEEQRVRSQAAHETIDLTVQGSLDKLAEHIRGTEFLGYSEPVTTSEVTVI 471
Query: 528 LVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVKKS 587
L+ G V + G V+++L++TPFYAESGGQIGD GFL + Q ++V +++VKK
Sbjct: 472 LMGGNSVESATSGDRVQIVLDKTPFYAESGGQIGDRGFL------SGQDSLVRIEEVKKE 525
Query: 588 LGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQAG 647
FVH G I G + VG + A +D R+RA+ +HTATHLLQAALK ++ + SQAG
Sbjct: 526 -SDFFVHFGRIERGSIAVGDRITAQIDRACRRRAQANHTATHLLQAALKLLVDEGISQAG 584
Query: 648 SLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAMFG 707
SLV FDRLRFDFN R L EL+++E +N WI +A+ Q + M L +AK GA+AMFG
Sbjct: 585 SLVDFDRLRFDFNCPRSLTAEELKQVEDRVNTWIAEAHQAQVETMGLTEAKAKGAVAMFG 644
Query: 708 EKYGEQVKI 716
EKY ++V++
Sbjct: 645 EKYADEVRV 653
>gi|254425077|ref|ZP_05038795.1| alanyl-tRNA synthetase [Synechococcus sp. PCC 7335]
gi|196192566|gb|EDX87530.1| alanyl-tRNA synthetase [Synechococcus sp. PCC 7335]
Length = 887
Score = 763 bits (1970), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/669 (56%), Positives = 497/669 (74%), Gaps = 25/669 (3%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
SG IRK+FL FY +RGH++L SASLVPEDPTVLLTIAGML FKPIFLG+ + RA T
Sbjct: 19 SGADIRKQFLSFYEARGHRILDSASLVPEDPTVLLTIAGMLPFKPIFLGQRSVEFDRATT 78
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
SQ+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFK +AI WAWE ST F LPA+R+
Sbjct: 79 SQKCIRTNDIENVGRTARHHTFFEMLGNFSFGDYFKAQAIAWAWELSTEIFKLPADRIVP 138
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
S++ DDDEAF IW E+G+P I RMG DNFW SG TGPCGPCSE+YYDFHP+RG
Sbjct: 139 SIFRDDDEAFAIWRDEIGIPENRIIRMGEADNFWKSGPTGPCGPCSELYYDFHPERGDDT 198
Query: 229 VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDL 288
+DL DDTRFIE+YNLVFMQYN+ +G+LEPL+ +NIDTGLGLER+A+ILQ VPNNYETDL
Sbjct: 199 IDLEDDTRFIEYYNLVFMQYNRDAEGNLEPLQAQNIDTGLGLERMAQILQGVPNNYETDL 258
Query: 289 IFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLI 348
I PII+ A+++AN+ Y Q+ D ++LK+IGDH+RA++++++DG+ SN+GRGYV+RRLI
Sbjct: 259 ILPIIQAAAQIANLDYHQATDAQKVSLKVIGDHVRAVMHMVADGISASNVGRGYVLRRLI 318
Query: 349 RRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELR 408
RR VR GRLLGI + F +AE++I L+ V+ RE I EL REE +
Sbjct: 319 RRVVRHGRLLGI--------DRPFTTEVAERSIALTEDAYPAVRTRETAIKNELDREETQ 370
Query: 409 FVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGV 468
F+QTL RGEK L +LA+ ++SG+DAF LYDT+GFP+E+T+E+AEE G+
Sbjct: 371 FLQTLARGEKRLADILAE---------QPKQVSGKDAFELYDTYGFPLELTQEIAEESGI 421
Query: 469 SVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLSAKAIVESL 527
+VD + F+IEM QR +S+AAH + L+V S D LAE+I TEF+GY L++++ VE++
Sbjct: 422 TVDTERFEIEMSQQRERSKAAHETIDLTVQSSLDTLAEQIDSTEFIGYQRLNSQSRVEAI 481
Query: 528 LVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVKKS 587
L+NG+ V G DV+++L++TPFYAESGGQIGD G+L + T V+ ++DVKK
Sbjct: 482 LINGESVDLAETGDDVQIVLDQTPFYAESGGQIGDRGYL------SGDTVVIRIEDVKKE 535
Query: 588 LGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQAG 647
G+ FVH G + G L V +V A +D R+RA+ +HTATHLLQAALK ++ + SQAG
Sbjct: 536 -GAFFVHFGKVERGSLTVDSQVSAQIDRACRRRAQANHTATHLLQAALKSLVNESISQAG 594
Query: 648 SLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAMFG 707
SLV FDRLRFDF+ + L +L+++E+ +N WI +A+ + M + +AK GA+AMFG
Sbjct: 595 SLVDFDRLRFDFHCPQALTPEQLQQVEKQVNSWIAEAHDADVQTMPIAEAKAKGAVAMFG 654
Query: 708 EKYGEQVKI 716
EKYG++V++
Sbjct: 655 EKYGDEVRV 663
>gi|427711801|ref|YP_007060425.1| alanyl-tRNA synthetase [Synechococcus sp. PCC 6312]
gi|427375930|gb|AFY59882.1| alanyl-tRNA synthetase [Synechococcus sp. PCC 6312]
Length = 885
Score = 762 bits (1968), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/671 (57%), Positives = 500/671 (74%), Gaps = 17/671 (2%)
Query: 47 PSSGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRA 106
P +GD IR+ FL+FYA++GH +LPSASL+PEDPTVLLTIAGML FKPIFLG+ R VP+A
Sbjct: 12 PLTGDQIRQTFLEFYAAKGHTILPSASLIPEDPTVLLTIAGMLPFKPIFLGQQARTVPKA 71
Query: 107 ATSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRL 166
TSQ+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFK EAI WAWE T + LP +RL
Sbjct: 72 TTSQKCIRTNDIENVGRTARHHTFFEMLGNFSFGDYFKTEAISWAWELLTEVYQLPPDRL 131
Query: 167 WISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGC 226
+SV+E DD+A+EIW+ ++G+P E I RMG D NFW +G TGPCGPCSEIYYDFHP+ G
Sbjct: 132 VVSVFESDDQAWEIWHSKIGIPPEKICRMGEDSNFWTAGPTGPCGPCSEIYYDFHPELGT 191
Query: 227 SDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYET 286
+DL DD+RFIE YNLVFM+ N+ + PL+ KNIDTG+GLER+A++LQ VPNNYET
Sbjct: 192 DGLDLEDDSRFIELYNLVFMELNQDANKHRTPLQAKNIDTGMGLERMAQVLQGVPNNYET 251
Query: 287 DLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRR 346
DLIFPII+ + LA+++YA++ + +LK+IGDHLRA+V+L+SDGV SN+GRGYV+RR
Sbjct: 252 DLIFPIIQATANLADINYAETTESVQTSLKVIGDHLRAVVHLISDGVSASNVGRGYVLRR 311
Query: 347 LIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREE 406
LIRR VR GRL+GI F +AE AI+LS + V+ R+ IL EL+REE
Sbjct: 312 LIRRVVRHGRLVGIT--------KPFTTGVAEVAIQLSEVVYPQVRQRQAVILAELEREE 363
Query: 407 LRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEH 466
F++TL+RGEKLL +++A A S +++ + +SG DAF LYDT+GFP E+T+E+A E
Sbjct: 364 ENFLKTLDRGEKLLAEIIAKAKSSGKKAKTA-MISGLDAFTLYDTYGFPFELTQEIAAEQ 422
Query: 467 GVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLSAKAIVE 525
G++VD KGFD EME+QR++SQAAH + L+V S D LAE I T+F+GYD + +
Sbjct: 423 GLTVDEKGFDQEMESQRQRSQAAHETIDLTVKGSLDQLAEDIHPTKFIGYDQFALTTEIA 482
Query: 526 SLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVK 585
+LLV+G V G+ V+V+L TPFYAESGGQIGD G+L G++ +V+++DV+
Sbjct: 483 ALLVDGDIVKSAGPGTSVQVILAETPFYAESGGQIGDRGYL---AGSD---VLVQIEDVQ 536
Query: 586 KSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQ 645
K G +FVH G + G L+ G V A +D R+R + HHTATHLLQAALKK+I SQ
Sbjct: 537 KENG-IFVHYGRVERGSLQAGDTVTAQIDLTSRRRIQAHHTATHLLQAALKKLIDDSISQ 595
Query: 646 AGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAM 705
AGSLVAFDRLRFDFN R L E++++E +N WI +++ QT+V+ + +AK GAIAM
Sbjct: 596 AGSLVAFDRLRFDFNCPRALTAAEVQQVEDQVNTWITESHATQTEVLPIAEAKAKGAIAM 655
Query: 706 FGEKYGEQVKI 716
FGEKYG +V++
Sbjct: 656 FGEKYGAEVRV 666
>gi|414077955|ref|YP_006997273.1| alanyl-tRNA synthetase [Anabaena sp. 90]
gi|413971371|gb|AFW95460.1| alanyl-tRNA synthetase [Anabaena sp. 90]
Length = 880
Score = 761 bits (1965), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/669 (56%), Positives = 493/669 (73%), Gaps = 21/669 (3%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
SG+ IR+ FLDFYA RGH+ LPSASLVPEDPTVLLTIAGML FKPIFLG+ + RA T
Sbjct: 9 SGNDIRQLFLDFYAQRGHQPLPSASLVPEDPTVLLTIAGMLPFKPIFLGQRTPEFKRATT 68
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
SQ+CIRTND+ENVGRT RHHTFFEMLGNFSFGDYFK +AI W WE ST FG L +
Sbjct: 69 SQKCIRTNDIENVGRTQRHHTFFEMLGNFSFGDYFKPQAIAWGWELSTQVFGFSPQNLVV 128
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
SV+EDDDEAF IW +GV + IKRMGADDNFW SG TGPCGPCSEIYYDFHP+RG
Sbjct: 129 SVFEDDDEAFAIWRDTIGVTEKRIKRMGADDNFWVSGITGPCGPCSEIYYDFHPERGEDH 188
Query: 229 VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDL 288
+DL DDTRFIEFYNLVFMQYN+ G+L PL+ +NIDTG+GLER+A+ILQK PNNYETDL
Sbjct: 189 IDLEDDTRFIEFYNLVFMQYNRDAAGNLTPLQNQNIDTGMGLERMAQILQKKPNNYETDL 248
Query: 289 IFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLI 348
IFPII+ A+++A + Y +SN+ T ++LK+IGDH+R++V++++D + SN+GRGYV+RRLI
Sbjct: 249 IFPIIETAAKIAKIDYYESNENTKVSLKVIGDHVRSVVHMIADEIRASNVGRGYVLRRLI 308
Query: 349 RRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELR 408
RR VR GRL+GI G+ F+ +AE AI LS I +V+ R I EL+REE
Sbjct: 309 RRVVRHGRLIGISGE--------FINQVAETAISLSESIYPNVRQRATAIKAELQREESN 360
Query: 409 FVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGV 468
F++TL+RGEKL LA+ + ++ G + +SG+ AF LYDT+GFP+E+T+EVAEE+ +
Sbjct: 361 FLKTLDRGEKL----LAEIIQEVKQKG-LTSISGESAFTLYDTYGFPLELTQEVAEENNI 415
Query: 469 SVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLSAKAIVESL 527
+VD+ GF+ EM+ Q +++AAH + L+V S D LAE I T+F+GY L+ A +E L
Sbjct: 416 TVDVDGFNAEMQKQVERAKAAHETIDLTVQGSLDKLAEHIHSTQFIGYTQLTTTAKIEVL 475
Query: 528 LVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVKKS 587
LV G G++V+++L++TPFYAESGGQIGD G++ + +V ++DVKK
Sbjct: 476 LVAGVSEEAAEAGTEVQIVLDKTPFYAESGGQIGDKGYI------SGDGVLVRIEDVKKE 529
Query: 588 LGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQAG 647
F+H G + G + +G E+ A +D R+RA+ +HTATHLLQAALKKV+ + SQAG
Sbjct: 530 -SDFFIHFGYVERGTIRIGDEITAQIDTACRRRAQANHTATHLLQAALKKVVDEGISQAG 588
Query: 648 SLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAMFG 707
SLV+FDRLRFDFN R L E+++IE L+N WI +A+ + M + AK GA+AMFG
Sbjct: 589 SLVSFDRLRFDFNCPRALTGEEVQQIEELVNSWISEAHSATIEEMPIAQAKAKGAVAMFG 648
Query: 708 EKYGEQVKI 716
EKYG+QV++
Sbjct: 649 EKYGDQVRV 657
>gi|113478168|ref|YP_724229.1| alanyl-tRNA synthetase [Trichodesmium erythraeum IMS101]
gi|122964340|sp|Q10VG8.1|SYA_TRIEI RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|110169216|gb|ABG53756.1| alanyl-tRNA synthetase [Trichodesmium erythraeum IMS101]
Length = 874
Score = 761 bits (1965), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/668 (56%), Positives = 494/668 (73%), Gaps = 22/668 (3%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
+G+ IRK+FL FYA R H +LPSASLVPEDPTVLLTIAGML FKPIFLG+ PRQ PRA T
Sbjct: 7 TGNEIRKKFLSFYAQREHTILPSASLVPEDPTVLLTIAGMLPFKPIFLGQQPRQYPRATT 66
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
SQ+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFK EAI AWE ST F LP RL +
Sbjct: 67 SQKCIRTNDIENVGRTARHHTFFEMLGNFSFGDYFKPEAIALAWELSTKIFALPPERLVV 126
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
SV+ +DDEAF IW ++G+P I+RM DNFW SG TGPCGPCSEIYYDFHP+ G
Sbjct: 127 SVFREDDEAFAIWRDQIGIPAHRIQRMDEADNFWASGPTGPCGPCSEIYYDFHPELGDDH 186
Query: 229 VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDL 288
+DL DDTRFIEFYNLVFMQYN+ +G+L PL+ +NIDTG+GLER+A+ILQKVPNNYETDL
Sbjct: 187 IDLEDDTRFIEFYNLVFMQYNRDANGNLTPLENRNIDTGMGLERMAQILQKVPNNYETDL 246
Query: 289 IFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLI 348
IFPIIK AS++A++ Y +S+D+T ++LK+IGDH+RA+ L++DGV SN+GRGY++RRLI
Sbjct: 247 IFPIIKTASDIADIDYRKSDDKTKVSLKVIGDHVRAVANLIADGVTASNVGRGYILRRLI 306
Query: 349 RRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELR 408
RR VR GRL+GI G+ F +AE AI L+ I +++ RE I EL+REE R
Sbjct: 307 RRVVRHGRLIGISGE--------FTSKVAETAITLAEDIYPNLRERETVIKAELQREESR 358
Query: 409 FVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGV 468
F++TLERGEKLL +++A E+ +SG+DAF LYDT+GFP+E+T+E+AEE+G+
Sbjct: 359 FLETLERGEKLLAEIMAKP-----ETKKTQHISGEDAFKLYDTYGFPLELTQEIAEENGL 413
Query: 469 SVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTLSAKAIVESLL 528
+VD+ FD EM+ + +SQ+AH + L+ D L I T+FLGY LS+ A V +L+
Sbjct: 414 TVDVSMFDQEMKLAQIRSQSAHETIDLTAQDGVKL--DIDKTQFLGYTDLSSPAQVMALV 471
Query: 529 VNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVKKSL 588
+G+ + V G+ V+++L++TPFYAESGGQI D G+L + + VV ++DV+K
Sbjct: 472 GDGEQLETVQAGAQVQIVLDKTPFYAESGGQIADRGYL------SGDSLVVRIEDVQKQ- 524
Query: 589 GSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQAGS 648
++FVH G I G L++G V A +D R+RA+ +HTATHLLQAAL+ ++ SQAGS
Sbjct: 525 NNIFVHFGRIERGRLQLGMTVNAQIDGTCRRRAQANHTATHLLQAALRSLVDSSISQAGS 584
Query: 649 LVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAMFGE 708
LV+FDRLRFDFN R L E+E++E +N WI +A+ M L+ AK GA+AMFGE
Sbjct: 585 LVSFDRLRFDFNCPRGLKPEEVEQVEAQVNSWIAEAHSATVAEMPLEVAKAKGAVAMFGE 644
Query: 709 KYGEQVKI 716
KY + V++
Sbjct: 645 KYADVVRV 652
>gi|282901157|ref|ZP_06309088.1| Alanyl-tRNA synthetase, class IIc [Cylindrospermopsis raciborskii
CS-505]
gi|281193989|gb|EFA68955.1| Alanyl-tRNA synthetase, class IIc [Cylindrospermopsis raciborskii
CS-505]
Length = 878
Score = 761 bits (1964), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/669 (56%), Positives = 498/669 (74%), Gaps = 21/669 (3%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
SG+ IR+ FLDFY R H+ LPSASLVPEDPTVLLTIAGML FKPIFLG+ + RA T
Sbjct: 7 SGNHIRQLFLDFYTQRQHQPLPSASLVPEDPTVLLTIAGMLPFKPIFLGQRAAEFKRATT 66
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
SQ+CIRTND+ENVGRT RHHTFFEMLGNFSFGDYFK++AI W WE ST F LPA RL +
Sbjct: 67 SQKCIRTNDIENVGRTKRHHTFFEMLGNFSFGDYFKEQAIAWGWEISTQVFELPAERLVV 126
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
SV+E+DDEAF IW ++VGVP + IKRMGADDNFW SG TGPCGPCSEIYYDFHP+ G
Sbjct: 127 SVFEEDDEAFNIWKQQVGVPEKRIKRMGADDNFWVSGPTGPCGPCSEIYYDFHPELGDDH 186
Query: 229 VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDL 288
+DL DD+RFIEFYNLVFMQYN+ G+L PL+ KNIDTG+GLER+A+ILQKVPNNYETDL
Sbjct: 187 IDLEDDSRFIEFYNLVFMQYNRDVSGNLTPLQNKNIDTGMGLERMAQILQKVPNNYETDL 246
Query: 289 IFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLI 348
IFPII+ A+++A ++Y S++ T ++LK+IGDH+RA+V++++D + SN+GRGY++RRLI
Sbjct: 247 IFPIIETAAKIAKINYHDSDENTKVSLKVIGDHVRAVVHMIADDIRASNVGRGYILRRLI 306
Query: 349 RRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELR 408
RR VR GRL+GI G+ F+ +AE AI LS + ++ RE I EL+REE
Sbjct: 307 RRVVRHGRLIGIPGE--------FINQVAETAISLSQSVYPHLRQREAVIKAELEREESN 358
Query: 409 FVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGV 468
F++TL+RGEKLL +++ + + + +SG AF LYDT+GFP+E+T+E+A+E +
Sbjct: 359 FLKTLDRGEKLLGEIIQEV-----KHQGLTIISGDSAFTLYDTYGFPLELTQEIAQEQNL 413
Query: 469 SVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLSAKAIVESL 527
SVD++GF+ EM Q +++AAH + L+V S D LAE I TEF+GY LS A + L
Sbjct: 414 SVDVEGFNTEMHKQVERAKAAHETIDLTVQGSLDKLAEHIHSTEFIGYRQLSTTAKIAVL 473
Query: 528 LVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVKKS 587
LV G G++V+++L++TPFYAESGGQIGD G+++ +++++DVKK
Sbjct: 474 LVEGIAQSTAPVGTNVQIVLDKTPFYAESGGQIGDQGYIF------GDGLLIKIEDVKKE 527
Query: 588 LGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQAG 647
F+H G I G ++VG V A VD R+RA+ +HTATHLLQAALKK++ + SQAG
Sbjct: 528 -SDFFIHFGKIERGTVKVGDSVTAQVDTGNRRRAQANHTATHLLQAALKKIVDEGISQAG 586
Query: 648 SLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAMFG 707
SLV+FDRLRFDFN + L + E++++E L+N WI A+ Q +++ L +AK GA+AMFG
Sbjct: 587 SLVSFDRLRFDFNCPKSLTEDEVQQVEDLVNAWISQAHPAQVEILPLPEAKARGAVAMFG 646
Query: 708 EKYGEQVKI 716
EKYG+QV++
Sbjct: 647 EKYGDQVRV 655
>gi|416391843|ref|ZP_11685743.1| Alanyl-tRNA synthetase [Crocosphaera watsonii WH 0003]
gi|357263757|gb|EHJ12724.1| Alanyl-tRNA synthetase [Crocosphaera watsonii WH 0003]
Length = 879
Score = 760 bits (1962), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/669 (56%), Positives = 501/669 (74%), Gaps = 23/669 (3%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
+G IR RFL FY+ H++LPSASLVPEDPTVLLTIAGML FKPIFLG+ PRA T
Sbjct: 9 TGQEIRDRFLQFYSQYKHQILPSASLVPEDPTVLLTIAGMLPFKPIFLGQKQSDFPRATT 68
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
SQ+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFK++AI+WAWE ST + LP + +
Sbjct: 69 SQKCIRTNDIENVGRTARHHTFFEMLGNFSFGDYFKEQAIKWAWELSTKVYQLPPENIVV 128
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
SV+E+DDEAF++W + +GVP + IKRMG DNFW +G TGPCGPCSE+YYDFHP+ G D
Sbjct: 129 SVFENDDEAFKMWEEIIGVPPQRIKRMGEKDNFWKAGPTGPCGPCSELYYDFHPELGDDD 188
Query: 229 VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDL 288
+DL DD+RFIEFYNLVFM+YN+ DG L PL+ KNIDTG+GLER+A+ILQKVPNNYETDL
Sbjct: 189 IDLEDDSRFIEFYNLVFMEYNRDADGKLTPLQNKNIDTGMGLERMAQILQKVPNNYETDL 248
Query: 289 IFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLI 348
IFPII+ A+ +AN++Y ++ ++T ++LK+IGDH+R++V+++SD + SN RGYV+RRLI
Sbjct: 249 IFPIIETAANIANINYQKATEKTKVSLKVIGDHVRSVVHMISDNITASNTDRGYVLRRLI 308
Query: 349 RRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELR 408
RR VR GRL+GI EG F+ +AE AI+LS V+ R+ I EL+REE
Sbjct: 309 RRVVRHGRLIGI--------EGKFINEVAETAIQLSQKAYPQVRERDSFIKAELEREEAT 360
Query: 409 FVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGV 468
F++TLERGEKL LA+ +S+T + G ++SG DAF LYDTFGFP+E+T+E+AEE +
Sbjct: 361 FLKTLERGEKL----LAEIISKTEKQG---QISGVDAFTLYDTFGFPLELTQEIAEESNL 413
Query: 469 SVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLSAKAIVESL 527
+VD++GF++EM+ Q+ +S+AAH + L+V S D LAE I TEFLGY L + A VE++
Sbjct: 414 TVDIEGFEVEMKQQQERSKAAHETIDLTVQGSLDKLAEHIHPTEFLGYTDLQSTAKVEAV 473
Query: 528 LVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVKKS 587
L+ GK V + G++++++L++TPFY ESGGQIGD GFL + V+ V DV+K
Sbjct: 474 LIEGKSVETATAGTEIQIVLDKTPFYGESGGQIGDRGFL------TGEDLVIRVDDVQKE 527
Query: 588 LGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQAG 647
G +FVH + G + V ++A +D R+R + +HTATHLLQAALKKV+ SQAG
Sbjct: 528 SG-IFVHFCRVERGQVSVNEHLKATIDRSCRRRVQANHTATHLLQAALKKVVDDSISQAG 586
Query: 648 SLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAMFG 707
SLV FDRLRFDFN R + EL+EIE LIN WI +A+ + +VM ++ AK GAIAMFG
Sbjct: 587 SLVDFDRLRFDFNCLRAVTSEELQEIEDLINTWIAEAHDTEIEVMPIETAKEKGAIAMFG 646
Query: 708 EKYGEQVKI 716
EKYG +V++
Sbjct: 647 EKYGAEVRV 655
>gi|427709962|ref|YP_007052339.1| alanyl-tRNA synthetase [Nostoc sp. PCC 7107]
gi|427362467|gb|AFY45189.1| alanyl-tRNA synthetase [Nostoc sp. PCC 7107]
Length = 880
Score = 759 bits (1961), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/669 (57%), Positives = 495/669 (73%), Gaps = 21/669 (3%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
SG+ IR FLDFYA R H++LPSASLVPEDPTVLLTIAGML FKPIFLG+ + RA T
Sbjct: 9 SGNEIRTLFLDFYAKRKHQILPSASLVPEDPTVLLTIAGMLPFKPIFLGQRTPEFKRATT 68
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
SQ+CIRTND+ENVGRT RHHTFFEMLGNFSFGDYFK++AI W WE ST FG L +
Sbjct: 69 SQKCIRTNDIENVGRTKRHHTFFEMLGNFSFGDYFKEQAIAWGWEISTQVFGFSPQNLVV 128
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
SV+E+DDEAFEIW ++GV IKRMGADDNFW SG TGPCGPCSEIYYDFHP+RG +
Sbjct: 129 SVFEEDDEAFEIWRDKIGVSAARIKRMGADDNFWASGPTGPCGPCSEIYYDFHPERGEDN 188
Query: 229 VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDL 288
+DL DDTRFIEFYNLVFMQYN+ G+L PL+ KNIDTG+GLER+A+ILQKVPNNYETDL
Sbjct: 189 IDLEDDTRFIEFYNLVFMQYNRDASGNLTPLQNKNIDTGMGLERMAQILQKVPNNYETDL 248
Query: 289 IFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLI 348
IFPII+ A+++A + Y S+D+T ++LK+IGDH+R++V++++D + SN+GRGYV+RRLI
Sbjct: 249 IFPIIQTAAQIAGIDYHTSDDKTKVSLKVIGDHVRSVVHMIADEIRASNVGRGYVLRRLI 308
Query: 349 RRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELR 408
RR VR GRLLGI G+ F+ +AE+AI LS +V+ RE I EL+REE
Sbjct: 309 RRVVRHGRLLGISGN--------FINQVAERAIALSESAYPNVRQREASIKAELEREESN 360
Query: 409 FVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGV 468
F++TL+RGEKLL++++ + +SG+ AF LYDT+GFP+E+T+EVAEE+ +
Sbjct: 361 FLRTLDRGEKLLEEIIQQVQQQ-----GQTEISGESAFTLYDTYGFPLELTQEVAEENNL 415
Query: 469 SVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLSAKAIVESL 527
+VD GF+ EM+ Q +++AAH + L+V S D LAE I TEF+GY +A VE L
Sbjct: 416 TVDEAGFNTEMQKQVERAKAAHETIDLTVQGSLDKLAEHIHATEFIGYTQAAATVKVEVL 475
Query: 528 LVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVKKS 587
LV+G G++V+++LN+TPFYAESGGQIGD G++ + VV V+DVKK
Sbjct: 476 LVDGVAEEAAEAGTEVQIVLNQTPFYAESGGQIGDRGYI------SGDGIVVRVEDVKKE 529
Query: 588 LGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQAG 647
FVH G I G L VG V A +D R+RA+ +HTATHLLQAALKK++ + SQAG
Sbjct: 530 -SDFFVHFGRIERGTLRVGDTVTAQIDAACRRRAQANHTATHLLQAALKKIVDEGISQAG 588
Query: 648 SLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAMFG 707
SLV+FDRLRFDFN R L E++++E +N WI +A+ + +V+ L +AK GA+AMFG
Sbjct: 589 SLVSFDRLRFDFNCPRALTTEEVQQVEEQVNTWISEAHSAKIEVLPLAEAKARGAVAMFG 648
Query: 708 EKYGEQVKI 716
EKYGE+V++
Sbjct: 649 EKYGEEVRV 657
>gi|75906451|ref|YP_320747.1| alanyl-tRNA synthetase [Anabaena variabilis ATCC 29413]
gi|123745317|sp|Q3MGN4.1|SYA_ANAVT RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|75700176|gb|ABA19852.1| alanyl-tRNA synthetase [Anabaena variabilis ATCC 29413]
Length = 880
Score = 759 bits (1960), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/669 (56%), Positives = 499/669 (74%), Gaps = 21/669 (3%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
SG+ IR RFLDFYA RGH++L SASLVPEDPTVLLTIAGML FKPIFLG+ + RA T
Sbjct: 9 SGNEIRTRFLDFYAQRGHQILASASLVPEDPTVLLTIAGMLPFKPIFLGQRTPEFKRATT 68
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
SQ+CIRTND+ENVGRT RH TFFEMLGNFSFGDYFK++AI W WE ST FGLP RL +
Sbjct: 69 SQKCIRTNDIENVGRTKRHQTFFEMLGNFSFGDYFKEQAIAWGWEISTEVFGLPKERLVV 128
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
SV+E+DDEA+ IW ++GV IKRMGADDNFW SG TGPCGPCSEIYYDFHP+RG +
Sbjct: 129 SVFEEDDEAYVIWRDQIGVTEARIKRMGADDNFWVSGPTGPCGPCSEIYYDFHPERGDEN 188
Query: 229 VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDL 288
+DL DDTRFIEFYNLVFMQYN+ G+L PL+ KNIDTG+GLERI +ILQ+VPNNYETDL
Sbjct: 189 IDLEDDTRFIEFYNLVFMQYNRDASGNLTPLQNKNIDTGMGLERITQILQQVPNNYETDL 248
Query: 289 IFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLI 348
IFPII+ A+++A + Y S++ T ++LK+IGDH+R++V++++D + SN+GRGYV+RRLI
Sbjct: 249 IFPIIETAAKIAGIDYHSSDETTKVSLKVIGDHVRSVVHMIADEIRASNVGRGYVLRRLI 308
Query: 349 RRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELR 408
RR VR GRL+GI G+ F+ +AE+AI LS +V+ RE I EL+REE
Sbjct: 309 RRVVRHGRLIGISGE--------FINQVAERAIALSESAYPNVRKRETVIKAELEREEAN 360
Query: 409 FVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGV 468
F++TL+RGEKLL+++ + + ++ G +SG+ AF LYDT+GFP+E+T+E+AEE+ +
Sbjct: 361 FLKTLDRGEKLLEEI----IQQVKKQGQTI-ISGESAFTLYDTYGFPLELTQEIAEENNL 415
Query: 469 SVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLSAKAIVESL 527
+VD F++EM+ Q +++AAH + L+V S D LAE I TEF+GY +A A VE L
Sbjct: 416 TVDEDDFNVEMQKQVERAKAAHETIDLTVQGSLDKLAEHIHATEFIGYSQATATAKVEVL 475
Query: 528 LVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVKKS 587
LV+G + G++V+++L++TPFYAESGGQIGD G++ + VV+V+DVKK
Sbjct: 476 LVDGVVQEEAEAGTEVQIVLDKTPFYAESGGQIGDRGYI------SGDGIVVQVEDVKKE 529
Query: 588 LGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQAG 647
FVH G I G L VG V A +D R+RA+ +HTATHLLQAALK ++ SQAG
Sbjct: 530 -SDFFVHFGRIERGTLRVGDSVTAQIDRAGRRRAQANHTATHLLQAALKTIVDGGISQAG 588
Query: 648 SLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAMFG 707
SLV+FDRLRFDFN R L E++++E IN WI +A+ + +V+ L +AK GA+AMFG
Sbjct: 589 SLVSFDRLRFDFNSPRGLTAEEIQQVEEQINTWIAEAHSAKIEVLPLAEAKARGAVAMFG 648
Query: 708 EKYGEQVKI 716
EKYG++V++
Sbjct: 649 EKYGDEVRV 657
>gi|302834443|ref|XP_002948784.1| hypothetical protein VOLCADRAFT_89008 [Volvox carteri f.
nagariensis]
gi|300265975|gb|EFJ50164.1| hypothetical protein VOLCADRAFT_89008 [Volvox carteri f.
nagariensis]
Length = 980
Score = 759 bits (1959), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/733 (54%), Positives = 493/733 (67%), Gaps = 50/733 (6%)
Query: 6 PSILPCGHFLFKGA---TGVPSARSTSASVQPLTEEVEDKSQDFPSSGDSIRKRFLDFYA 62
P+I+ G F +G T V + + S + PL + SG IR+ FL F+
Sbjct: 46 PAIVAAGPFYARGTHLTTLVTPSATASQAPGPLKK----------MSGAEIREAFLSFFE 95
Query: 63 SRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQRCIRTNDVENVG 122
S+GH LPS+SLVPEDPTVLLTIAGMLQFKP+FLG+ PR+VP A T+Q+C+RTND+ NVG
Sbjct: 96 SKGHTRLPSSSLVPEDPTVLLTIAGMLQFKPVFLGQAPRKVPTATTTQKCVRTNDIGNVG 155
Query: 123 RTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWISVYEDDDEAFEIWN 182
T+RHHTFFEMLGNFSFGDYFK++AI+WAWE ST FGLP R+W+SV+E+D EA IW
Sbjct: 156 VTARHHTFFEMLGNFSFGDYFKEQAIRWAWELSTGVFGLPPERVWVSVFEEDGEAEAIWR 215
Query: 183 KEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSDVDLGDDTRFIEFYN 242
VGVP E IKRMGA DNFW+SG TGPCGPCSE+YYDFHP+RG L DDTRFIEFYN
Sbjct: 216 DVVGVPPERIKRMGAADNFWSSGPTGPCGPCSELYYDFHPERGTEGASLEDDTRFIEFYN 275
Query: 243 LVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDLIFPIIKKASELANV 302
LVFMQ N+K DGSLEPL KNIDTG+GLER+A+ILQ VPNNYETDLIFPI++KA+E+A V
Sbjct: 276 LVFMQLNRKPDGSLEPLAAKNIDTGMGLERMAQILQGVPNNYETDLIFPIVQKAAEIAAV 335
Query: 303 SYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLIRRAVRTGRLLGIKG 362
Y ++ LK+IGDH RA+ Y+LSDGV PSN GRGYV+RRL+RR V GRLLGI+
Sbjct: 336 DYHSASPAVKTALKVIGDHTRAVTYMLSDGVTPSNTGRGYVLRRLLRRVVMKGRLLGIR- 394
Query: 363 DGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELRFVQTLERGEKLLDQ 422
F P++A A+ LS D V+ QRI +EL REE FV TLERG+K LD+
Sbjct: 395 -------EVFTPAVAAVAVGLSGPCDPAVQKNAQRIYDELAREEGLFVATLERGQKQLDE 447
Query: 423 MLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGVSVDMKGFDIEMENQ 482
+L+ A + T + G DAF+LYDTFGFP+E+T+E+AE GV VD+ GFD EME Q
Sbjct: 448 LLSAATASTGSR----VIGGADAFMLYDTFGFPLELTQELAEARGVEVDVAGFDGEMEAQ 503
Query: 483 RRQSQAAHNAVKLSVDDSADLAE-------------KIP---------DTEFLGYDTLSA 520
R++S+ + V L+ +IP T F GY
Sbjct: 504 RQRSKESRETVDLTAQAGLAQLAAQTHSRSWLPPGVRIPIRTQRMRVGPTSFTGYSATRG 563
Query: 521 KAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYV--TQGTNQQTAV 578
V L+ GKPV +V G EVLL+ TPFYAESGGQ+GD G L + G + A
Sbjct: 564 CGRVVGLMREGKPVERVHAGDRCEVLLDVTPFYAESGGQVGDMGRLVLPAAAGEAEVAAE 623
Query: 579 VEVKDVKKSL-GSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKK 637
V V+D +K+ GSVFVH + G L VG V A+VD LR+R + HHTATHLLQ+ALK
Sbjct: 624 VAVRDCQKAAGGSVFVHSCEVVAGELGVGDAVNALVDDDLRRRVRAHHTATHLLQSALKI 683
Query: 638 VIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDA 697
V+G +T Q GSLV F RLRFDFN R + +EL E+ERL+N W+ A L+T+VM L +A
Sbjct: 684 VLGPDTCQQGSLVNFQRLRFDFNLARAMSPSELTEVERLVNCWVAQAAPLETRVMGLQEA 743
Query: 698 KRAGAIAMFGEKY 710
K AGA AMFGEKY
Sbjct: 744 KAAGATAMFGEKY 756
>gi|443478180|ref|ZP_21067963.1| alanyl-tRNA synthetase [Pseudanabaena biceps PCC 7429]
gi|443016569|gb|ELS31203.1| alanyl-tRNA synthetase [Pseudanabaena biceps PCC 7429]
Length = 880
Score = 758 bits (1958), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/673 (56%), Positives = 494/673 (73%), Gaps = 23/673 (3%)
Query: 46 FPS-SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVP 104
PS +G IR +FL F+ R HKVLPSASLVP DPTVLLTIAGML FKPIFLG+ +VP
Sbjct: 4 LPSLTGAEIRSKFLRFFEERDHKVLPSASLVPADPTVLLTIAGMLPFKPIFLGQQEAEVP 63
Query: 105 RAATSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPAN 164
RA TSQ+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFKKEAI W WE T F LP +
Sbjct: 64 RATTSQKCIRTNDIENVGRTARHHTFFEMLGNFSFGDYFKKEAIAWGWELVTKVFQLPPD 123
Query: 165 RLWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDR 224
RL +SVY D++AF IW +G+P I+RMG DDNFW SGATGPCGPCSEIY+DFHP+
Sbjct: 124 RLVVSVYHTDEDAFAIWRDAIGIPAHRIQRMG-DDNFWASGATGPCGPCSEIYFDFHPEL 182
Query: 225 GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNY 284
G +DL DD+RF+E YNLVFM+ N++ DGSL LK++NIDTGLGLER+A++LQ VPNNY
Sbjct: 183 GDDAIDLEDDSRFLEIYNLVFMELNREADGSLTKLKKQNIDTGLGLERMAQVLQGVPNNY 242
Query: 285 ETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVV 344
ETDLIFPI+KKA++LA + Y QS+++ +LK+IGDH+R++V++++DG+ SN+GRGYV+
Sbjct: 243 ETDLIFPIVKKAADLAGLDYHQSDEKVKTSLKVIGDHVRSVVHMIADGINASNVGRGYVM 302
Query: 345 RRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKR 404
RRL+RR VR GRL+GI G F +AE AI LS + + + RE+ I +E++
Sbjct: 303 RRLLRRVVRHGRLIGIS--------GTFASEVAEVAIALSESVYPNTREREKVIKDEIQI 354
Query: 405 EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAE 464
EE RF+QTLERGEKLL ++L A S++ ++ +SG DAF LYDT+GFP E+T+E+AE
Sbjct: 355 EETRFLQTLERGEKLLVEILEKAASQSSKT-----ISGVDAFTLYDTYGFPFELTQEIAE 409
Query: 465 EHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDS-ADLAEKIPDTEFLGYDTLSAKAI 523
E G VD +GFD EM+ Q+ +SQAAH + L DS ++A++I TEFLGY LS+ A
Sbjct: 410 EEGFVVDAEGFDAEMKKQQERSQAAHEDIDLMAKDSWVNIAKEIGKTEFLGYKELSSSAQ 469
Query: 524 VESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKD 583
V+ +LVNG+ V G+ V+++L+RTPFYAESGGQ+GD G+L + + A+ ++ D
Sbjct: 470 VKRILVNGESVKTAIAGNKVQIVLDRTPFYAESGGQVGDKGYLAIGE------AIAQISD 523
Query: 584 VKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQET 643
V+K +FVH G I G + VG V A + R+R + HHTATHLLQAALKK++
Sbjct: 524 VQKQ-ADLFVHIGQIERGEITVGDHVNAQIAVSDRRRIQAHHTATHLLQAALKKIVDPNV 582
Query: 644 SQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAI 703
SQAGSLV DRLRFDFN +R + E+++IE IN WI +A+ +VM + AK GAI
Sbjct: 583 SQAGSLVDGDRLRFDFNLNRAVTAVEIQQIELQINNWIAEAHDSVIEVMPIAQAKAKGAI 642
Query: 704 AMFGEKYGEQVKI 716
AMFGEKYG +V++
Sbjct: 643 AMFGEKYGAEVRV 655
>gi|119513305|ref|ZP_01632344.1| Alanyl-tRNA synthetase, class IIc [Nodularia spumigena CCY9414]
gi|119462040|gb|EAW43038.1| Alanyl-tRNA synthetase, class IIc [Nodularia spumigena CCY9414]
Length = 880
Score = 758 bits (1958), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/669 (56%), Positives = 495/669 (73%), Gaps = 21/669 (3%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
SG+ IR FL+F+A RGH++LPSASLVPEDPTVLLTIAGML FKPIFLG+ + RA T
Sbjct: 9 SGNEIRDIFLNFFAQRGHQILPSASLVPEDPTVLLTIAGMLPFKPIFLGQRTAEFNRATT 68
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
SQ+CIRTND+ENVGRT RHHTFFEMLGNFSFGDYFK +AI W WE ST FGLP +L +
Sbjct: 69 SQKCIRTNDIENVGRTKRHHTFFEMLGNFSFGDYFKPQAIAWGWELSTQVFGLPPEKLVV 128
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
SV+EDDDEA+ IW ++GVP IKRMG DDNFW SG TGPCGPCSEIYYDFHP+ G +
Sbjct: 129 SVFEDDDEAYNIWRDDIGVPEARIKRMGEDDNFWVSGHTGPCGPCSEIYYDFHPELGDEN 188
Query: 229 VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDL 288
+DL DDTRFIEFYNLVFMQYN+ +G+L PL+ KNIDTG+GLER+A+ILQ+VPNNYETDL
Sbjct: 189 IDLEDDTRFIEFYNLVFMQYNRDAEGNLTPLQNKNIDTGMGLERMAQILQQVPNNYETDL 248
Query: 289 IFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLI 348
IFPII+ A+E+A + Y +S++ T ++LK+IGDH+R++V +++D + SN+GRGYV+RRLI
Sbjct: 249 IFPIIETAAEIAGIDYHKSDETTQVSLKVIGDHVRSVVQMIADEIRASNVGRGYVLRRLI 308
Query: 349 RRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELR 408
RR VR GRLLGI + F+ +AE AI LS +V+ RE I EL+REE
Sbjct: 309 RRVVRHGRLLGINSE--------FITQVAETAISLSESAYPNVRQREAAIKAELQREEAN 360
Query: 409 FVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGV 468
F++TL+RGEKLL++++ + + + S +SG+ AF LYDTFGFP+E+T+E+A E+ +
Sbjct: 361 FLRTLDRGEKLLEEIIQEVKQQGKTS-----ISGESAFTLYDTFGFPLELTQEIAAENQL 415
Query: 469 SVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLSAKAIVESL 527
+VD GF+ EM+ Q +++AAH + L+V S D LAE I TEF+GY A VE++
Sbjct: 416 TVDEAGFNTEMQKQVERAKAAHETIDLTVQGSLDKLAEHIQATEFIGYTQPVGTANVEAI 475
Query: 528 LVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVKKS 587
L++G + G++++++LN+TPFYAESGGQIGD G++ + +V V+DVK+
Sbjct: 476 LIDGIAQEEAEAGTEIQIVLNQTPFYAESGGQIGDKGYI------SGDGVLVRVEDVKRE 529
Query: 588 LGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQAG 647
F+H G I G + VG V A +D R+RA+ +HTATHLLQAALKK++ SQAG
Sbjct: 530 -SDFFIHFGRIERGTIRVGDSVTAQIDRTCRRRAQANHTATHLLQAALKKLVDDSISQAG 588
Query: 648 SLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAMFG 707
SLV+FDRLRFDFN R L E+E++E +N WI +A+ +V+ + +AK GA+AMFG
Sbjct: 589 SLVSFDRLRFDFNCPRGLTAAEVEQVEAQVNTWIAEAHTANIEVLPIAEAKARGAVAMFG 648
Query: 708 EKYGEQVKI 716
EKYGE+V++
Sbjct: 649 EKYGEEVRV 657
>gi|17229910|ref|NP_486458.1| alanyl-tRNA synthetase [Nostoc sp. PCC 7120]
gi|20532251|sp|Q8YUD4.1|SYA_NOSS1 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|17131510|dbj|BAB74117.1| alanyl-tRNA synthetase [Nostoc sp. PCC 7120]
Length = 880
Score = 756 bits (1952), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/669 (56%), Positives = 496/669 (74%), Gaps = 21/669 (3%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
SG+ IR RFLDFYA RGH++L SASLVPEDPTVLLTIAGML FKPIFLG+ + RA T
Sbjct: 9 SGNEIRTRFLDFYAQRGHQILASASLVPEDPTVLLTIAGMLPFKPIFLGQRTPEFKRATT 68
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
SQ+CIRTND+ENVGRT RH TFFEMLGNFSFGDYFK++AI W WE ST FGLP RL +
Sbjct: 69 SQKCIRTNDIENVGRTKRHQTFFEMLGNFSFGDYFKEQAIAWGWEISTEVFGLPKERLVV 128
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
SV+E+DDEA+ IW ++GV IKRMGADDNFW SG TGPCGPCSEIYYDFHP+RG +
Sbjct: 129 SVFEEDDEAYAIWRDQIGVTEARIKRMGADDNFWVSGPTGPCGPCSEIYYDFHPERGDDN 188
Query: 229 VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDL 288
+DL DDTRFIEFYNLVFMQYN+ G+L PL+ KNIDTG+GLERI +ILQ+VPNNYETDL
Sbjct: 189 IDLEDDTRFIEFYNLVFMQYNRDASGNLTPLQNKNIDTGMGLERITQILQRVPNNYETDL 248
Query: 289 IFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLI 348
IFPII+ A+++A + Y S++ T ++LK+IGDH+R++V++++D + SN+GRGYV+RRLI
Sbjct: 249 IFPIIETAAKIAGIDYHSSDESTKVSLKVIGDHVRSVVHMIADEIRASNVGRGYVLRRLI 308
Query: 349 RRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELR 408
RR VR GRL+GI G+ F+ +AE AI LS +V+ RE I EL+REE
Sbjct: 309 RRVVRHGRLIGISGE--------FINQVAETAIALSESAYPNVRQRETVIKAELEREEAN 360
Query: 409 FVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGV 468
F++TL+RGEKLL +++A+ + + +SG+DAF LYDT GFP+E+T+E+AEE+ +
Sbjct: 361 FLKTLDRGEKLLAEIIAEVKKQGKTV-----ISGKDAFTLYDTHGFPLELTQEIAEENNL 415
Query: 469 SVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLSAKAIVESL 527
+VD++GF +ME Q++ + AH + L+V S D LAE I TEF+GY +A A VE L
Sbjct: 416 TVDVEGFQKQMEIQQQGGRGAHETIDLTVQGSLDKLAEHIHATEFIGYSQATATAKVEVL 475
Query: 528 LVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVKKS 587
LV+G + G++V+++L+ TPFYAESGGQIGD G++ + VV+V+DVKK
Sbjct: 476 LVDGVVQEEAEAGTEVQIVLDETPFYAESGGQIGDRGYI------SGDGIVVQVEDVKKE 529
Query: 588 LGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQAG 647
FVH G I G L VG V A +D R+RA+ +HTATHLLQAALK ++ SQAG
Sbjct: 530 -SDFFVHFGRIERGTLRVGDNVTAQIDRAGRRRAQANHTATHLLQAALKTIVDGGISQAG 588
Query: 648 SLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAMFG 707
SLV+FDRLRFDFN R L E++++E IN WI +A+ + +++ L +AK GA+AMFG
Sbjct: 589 SLVSFDRLRFDFNSPRGLTVEEIQQVEEQINTWIAEAHSAKIELLPLAEAKARGAVAMFG 648
Query: 708 EKYGEQVKI 716
EKYG++V++
Sbjct: 649 EKYGDEVRV 657
>gi|186681072|ref|YP_001864268.1| alanyl-tRNA synthetase [Nostoc punctiforme PCC 73102]
gi|205830164|sp|B2J876.1|SYA_NOSP7 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|186463524|gb|ACC79325.1| alanyl-tRNA synthetase [Nostoc punctiforme PCC 73102]
Length = 880
Score = 756 bits (1951), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/669 (56%), Positives = 500/669 (74%), Gaps = 21/669 (3%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
SG+ IR FL+F+A R H++LPSASLVPEDPTVLLTIAGML FKPIFLG+ + RA T
Sbjct: 9 SGNEIRNTFLNFFAQRSHQILPSASLVPEDPTVLLTIAGMLPFKPIFLGQRTPEFKRATT 68
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
SQ+CIRTND+ENVGRT RHHTFFEMLGNFSFGDYFK++AI W WE ST FG L +
Sbjct: 69 SQKCIRTNDIENVGRTKRHHTFFEMLGNFSFGDYFKEQAIAWGWEISTQVFGFSPQNLVV 128
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
SV+EDDDEAF IW ++GVPV IKR+G DDNFW SG TGPCGPCSEIYYDFHP+RG +
Sbjct: 129 SVFEDDDEAFAIWRDQIGVPVARIKRLGEDDNFWVSGPTGPCGPCSEIYYDFHPERGDEN 188
Query: 229 VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDL 288
+DL DD+RFIEFYNLVFMQYN+ G+L PL+ KNIDTG+GLER+A+ILQKVPNNYETDL
Sbjct: 189 IDLEDDSRFIEFYNLVFMQYNRDVLGNLTPLQNKNIDTGMGLERMAQILQKVPNNYETDL 248
Query: 289 IFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLI 348
IFPII+ A+++A + Y S+++T ++LK+IGDH+R++V++++D + SN+GRGYV+RRLI
Sbjct: 249 IFPIIQTAAQIAGIDYHSSDEKTKVSLKVIGDHVRSVVHMIADEIRASNVGRGYVLRRLI 308
Query: 349 RRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELR 408
RR VR GRL+GI G+ F +AE AI LS +V+ RE I EL+REE
Sbjct: 309 RRVVRHGRLIGISGE--------FTTQVAESAIALSESAYPNVRQREAAIKAELQREESN 360
Query: 409 FVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGV 468
F++TL+RGEKLL++++ + ++ GS ++SG+ AF LYDT+GFP+E+T+EVAEE+ +
Sbjct: 361 FLRTLDRGEKLLEEIIQE----VKQQGST-QISGESAFTLYDTYGFPLELTQEVAEENNL 415
Query: 469 SVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLSAKAIVESL 527
+VD +GF+ +ME Q+ + + AH + L+V S D LAE I TEFLGY +A AI+E++
Sbjct: 416 TVDAEGFEAQMEIQKGRGRDAHETIDLTVQGSLDKLAEHIQVTEFLGYTQSAATAIIEAI 475
Query: 528 LVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVKKS 587
L+ G + G+ V+++L++TPFYAESGGQIGD G++ + VV V+DVKK
Sbjct: 476 LLEGVSQEEAEAGTQVQIVLDKTPFYAESGGQIGDRGYI------SGDGIVVRVEDVKKE 529
Query: 588 LGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQAG 647
FVH G I G L VG V A +DP R+RA+ +HTATHLLQAALKK++ SQAG
Sbjct: 530 -SDFFVHFGRIERGTLRVGDRVTAQIDPACRRRAQANHTATHLLQAALKKIVDDGISQAG 588
Query: 648 SLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAMFG 707
SLV+FDRLRFDFN R L E++++E +N WI +A+ + +V+ L +AK GA+AMFG
Sbjct: 589 SLVSFDRLRFDFNCPRALTAEEVQQVEEQVNSWIAEAHAAKVEVLPLAEAKAKGAVAMFG 648
Query: 708 EKYGEQVKI 716
EKYG++V++
Sbjct: 649 EKYGDEVRV 657
>gi|440682846|ref|YP_007157641.1| alanyl-tRNA synthetase [Anabaena cylindrica PCC 7122]
gi|428679965|gb|AFZ58731.1| alanyl-tRNA synthetase [Anabaena cylindrica PCC 7122]
Length = 880
Score = 754 bits (1948), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/669 (55%), Positives = 496/669 (74%), Gaps = 21/669 (3%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
SG+ IR FLDFY RGH+ LPSASLVPEDPTVLLTIAGML FKPIFLG+ + RA T
Sbjct: 9 SGNDIRALFLDFYTQRGHQPLPSASLVPEDPTVLLTIAGMLPFKPIFLGQRTPEFKRATT 68
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
SQ+CIRTND+ENVGRT RHHTFFEMLGNFSFGDYFK +AI W WE ST FG+ L +
Sbjct: 69 SQKCIRTNDIENVGRTKRHHTFFEMLGNFSFGDYFKAQAIAWGWEISTQVFGISPQNLVV 128
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
SV+E+DDEAF IW +GV + IKRMGADDNFW SG TGPCGPCSEIYYDFHP+ G +
Sbjct: 129 SVFEEDDEAFAIWRDNIGVNEKRIKRMGADDNFWVSGPTGPCGPCSEIYYDFHPELGDDN 188
Query: 229 VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDL 288
+DL DDTRFIEFYNLVFMQYN+ G+L PL+ KNIDTG+GLER+A+ILQK PNNYETDL
Sbjct: 189 IDLEDDTRFIEFYNLVFMQYNRDVSGNLTPLQNKNIDTGMGLERMAQILQKKPNNYETDL 248
Query: 289 IFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLI 348
IFPII+ A+++A + Y QS++ T ++LK+IGDH+R++V++++D + SN+GRGYV+RRLI
Sbjct: 249 IFPIIETAAKIAKIDYHQSDENTKISLKVIGDHVRSVVHMIADEIRASNVGRGYVLRRLI 308
Query: 349 RRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELR 408
RR VR GRL+GI G+ F+ +AE AI LS + +++ RE I EL+REE+
Sbjct: 309 RRVVRHGRLIGISGE--------FINQVAETAISLSESVYPNLRKREAPIKAELQREEVN 360
Query: 409 FVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGV 468
F++TL+RGEKLL +++ + ++S ++G+ AF LYDT+GFP+E+T+EVAEE+ +
Sbjct: 361 FLKTLDRGEKLLAEIIETVKQQGQKS-----ITGESAFTLYDTYGFPLELTQEVAEENNL 415
Query: 469 SVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLSAKAIVESL 527
+VD++GF+ EM+ Q +++AAH + L+V S D LAE I T+F+GY + A +E L
Sbjct: 416 TVDVEGFNAEMQKQIERAKAAHETIDLTVQGSLDKLAEHIHSTDFIGYTATATTAKIEVL 475
Query: 528 LVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVKKS 587
LV+G G++V+++L++TPFYAESGGQIGD G++ + ++ ++DVKK
Sbjct: 476 LVSGVSEEAAEAGTEVQIVLDKTPFYAESGGQIGDKGYI------SGDGILIRIEDVKKE 529
Query: 588 LGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQAG 647
F+H G I G + +G V A +D R+RA+ +HTATHLLQAALKKV+ + SQAG
Sbjct: 530 -SDFFIHFGRIERGTIRIGDHVTAQIDTACRRRAQANHTATHLLQAALKKVVDEGISQAG 588
Query: 648 SLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAMFG 707
SLV+FDRLRFDFN R L E+++IE L+N WI +A+ + +V+ + +AK GA+AMFG
Sbjct: 589 SLVSFDRLRFDFNCPRALTAEEVQQIEELVNTWISEAHAAKVEVLPIAEAKAKGAVAMFG 648
Query: 708 EKYGEQVKI 716
EKYG+ V++
Sbjct: 649 EKYGDDVRV 657
>gi|434403586|ref|YP_007146471.1| alanyl-tRNA synthetase [Cylindrospermum stagnale PCC 7417]
gi|428257841|gb|AFZ23791.1| alanyl-tRNA synthetase [Cylindrospermum stagnale PCC 7417]
Length = 880
Score = 753 bits (1945), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/669 (56%), Positives = 494/669 (73%), Gaps = 21/669 (3%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
SG+ IR FLDFYA RGH++LPSASLVPEDPTVLLTIAGML FKPIFLG+ + RA T
Sbjct: 9 SGNEIRALFLDFYAQRGHQILPSASLVPEDPTVLLTIAGMLPFKPIFLGQRTPEFKRATT 68
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
SQ+CIRTND+ENVGRT RHHTFFEMLGNFSFGDYFK++AI W WE ST FG L +
Sbjct: 69 SQKCIRTNDIENVGRTKRHHTFFEMLGNFSFGDYFKEQAIAWGWELSTKVFGFSPQNLVV 128
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
SV+E+DDEAF IW ++GVP IKRMGADDNFW SG TGPCGPCSEIYYDFHP+RG +
Sbjct: 129 SVFEEDDEAFGIWRDQIGVPAARIKRMGADDNFWVSGPTGPCGPCSEIYYDFHPERGDEN 188
Query: 229 VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDL 288
+DL DD+RFIEFYNLVFMQYN+ GSL PL+ +NIDTG+GLER+A+ILQKV NN+ETDL
Sbjct: 189 IDLEDDSRFIEFYNLVFMQYNRDVSGSLTPLQNQNIDTGMGLERMAQILQKVANNFETDL 248
Query: 289 IFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLI 348
IFPII+ A+++A + Y S+++T ++LK+IGDH+R++V++++D + SN+GRGYV+RRLI
Sbjct: 249 IFPIIQTAAQIAGLDYHSSDEKTKISLKVIGDHVRSVVHMIADEIRASNVGRGYVLRRLI 308
Query: 349 RRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELR 408
RR VR GRL+GI G+ F +AE AI LS +V+ RE I+ EL+REE
Sbjct: 309 RRVVRHGRLIGISGE--------FTTKVAETAIALSESAYPNVRRREAAIMAELQREESN 360
Query: 409 FVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGV 468
F++TLERGEKLL++++ + + + +SG+ AF LYDT+GFP+E+T+E+AEE+ +
Sbjct: 361 FLRTLERGEKLLEEIIEGVKQQGKTA-----ISGESAFTLYDTYGFPLELTQEIAEENHL 415
Query: 469 SVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLSAKAIVESL 527
+VD GF+ EM+ Q +++AAH + L+V S D LAE I TEF+GY +A A VE L
Sbjct: 416 TVDEVGFNAEMQKQVERAKAAHETIDLTVQGSLDKLAEHIHSTEFIGYTQAAATAKVEVL 475
Query: 528 LVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVKKS 587
LV G G++V+++LN TPFYAESGGQIGD G++ + +V V+DVKK
Sbjct: 476 LVGGVSQEAAEAGTEVQIVLNTTPFYAESGGQIGDRGYI------SGDGILVRVEDVKKE 529
Query: 588 LGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQAG 647
FVH G I G L VG V A +D R+RA+ +HTATHLLQAALKK++ SQAG
Sbjct: 530 -SDFFVHFGRIERGTLRVGDTVTAQIDSACRRRAQANHTATHLLQAALKKIVDNGISQAG 588
Query: 648 SLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAMFG 707
SLV+FDRLRFDFN R L E++++E +N WI +A+ + +V+ L +AK GA+AMFG
Sbjct: 589 SLVSFDRLRFDFNCPRGLTAEEVQQVEEQVNTWIAEAHSAKIEVLPLAEAKARGAVAMFG 648
Query: 708 EKYGEQVKI 716
EKYGE+V++
Sbjct: 649 EKYGEEVRV 657
>gi|158337563|ref|YP_001518738.1| alanyl-tRNA synthetase [Acaryochloris marina MBIC11017]
gi|205829961|sp|B0CFX4.1|SYA_ACAM1 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|158307804|gb|ABW29421.1| alanyl-tRNA synthetase [Acaryochloris marina MBIC11017]
Length = 873
Score = 753 bits (1943), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/669 (55%), Positives = 501/669 (74%), Gaps = 25/669 (3%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
SG IR+ FLDFYA++GHK+LPSASLVPEDPTVLLTIAGML FKPIFLG+ +VPRA T
Sbjct: 6 SGAQIRQTFLDFYAAKGHKILPSASLVPEDPTVLLTIAGMLPFKPIFLGQREAEVPRATT 65
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
SQ+CIRTND+ENVG+T+RHHT+FEMLGNFSFGDYFK++AI WAWE ST + LP R+
Sbjct: 66 SQKCIRTNDIENVGQTARHHTYFEMLGNFSFGDYFKEQAIAWAWELSTEVYKLPPERIVP 125
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
SV+E+DDEAF IW ++G+P I+RMGA+DNFW SG TGPCGPCSE+YYDF+P++G
Sbjct: 126 SVFEEDDEAFAIWRDKIGIPEHRIQRMGAEDNFWASGPTGPCGPCSELYYDFYPEKGDDK 185
Query: 229 VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDL 288
+DL DDTRFIE+YNLVFM+YN+ DG L PLK KNIDTGLGLER+A+ILQ VPNNYETDL
Sbjct: 186 IDLEDDTRFIEYYNLVFMEYNRDSDGKLAPLKNKNIDTGLGLERMAQILQGVPNNYETDL 245
Query: 289 IFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLI 348
IFPII+ A+++A + Y +S +T +LK++GDH+R++V +++DG+ SN+GRGYV+RRLI
Sbjct: 246 IFPIIETAAKIAGIKYKKSKAKTKTSLKVVGDHVRSVVQMIADGITASNVGRGYVLRRLI 305
Query: 349 RRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELR 408
RR VR G+L+GI +GAF+ +AE AI +V+ RE+ I EL+REE +
Sbjct: 306 RRVVRHGQLIGI--------DGAFITQVAETAIASLEVAYPEVREREKIIKTELEREEAQ 357
Query: 409 FVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGV 468
F++TL RGEKLL +++A ++SG+DAF LYDT+GFP+E+T+E+A E G+
Sbjct: 358 FLKTLNRGEKLLGEIMAK---------KPKQISGKDAFDLYDTYGFPLELTQEIAAEQGL 408
Query: 469 SVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLSAKAIVESL 527
+VD GF M+ Q+ + ++AH + L+V + + LA + T+FLGY SAKA V +L
Sbjct: 409 TVDEDGFAKAMKEQQDRGRSAHKTIDLTVQSALEQLAATVHPTDFLGYTDFSAKAKVAAL 468
Query: 528 LVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVKKS 587
LV G+ V + S GS+V++ L++TPFYAESGGQIGD G+L N + VV ++DV+K
Sbjct: 469 LVKGETVDQASAGSEVQIALDQTPFYAESGGQIGDRGYL------NGKDVVVRIEDVQKE 522
Query: 588 LGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQAG 647
+F+H G I G LEVG ++ A +D R++ + HHTATHLLQAALK ++ + QAG
Sbjct: 523 -SDIFIHYGRIERGTLEVGDKLTAQIDLACRRQVQAHHTATHLLQAALKNIVDESIGQAG 581
Query: 648 SLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAMFG 707
SLVAFDRLRFDFN+++ + +++EIE IN WI +A+ +T+VM + +AK GA+AMFG
Sbjct: 582 SLVAFDRLRFDFNYNQAVTPEQIQEIETQINTWIAEAHTTETEVMPIAEAKAKGAVAMFG 641
Query: 708 EKYGEQVKI 716
EKYG +V++
Sbjct: 642 EKYGAEVRV 650
>gi|443315520|ref|ZP_21045006.1| alanyl-tRNA synthetase [Leptolyngbya sp. PCC 6406]
gi|442784868|gb|ELR94722.1| alanyl-tRNA synthetase [Leptolyngbya sp. PCC 6406]
Length = 879
Score = 753 bits (1943), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/679 (56%), Positives = 495/679 (72%), Gaps = 25/679 (3%)
Query: 39 VEDKSQDFPSSGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGK 98
V S +SG +IR+ FL+FYA++GH++ PSASLVPEDPTVLLTIAGML FKPIFLG+
Sbjct: 2 VSSPSSAVVTSGAAIRQAFLEFYAAKGHRIEPSASLVPEDPTVLLTIAGMLPFKPIFLGQ 61
Query: 99 VPRQVPRAATSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE 158
P PRA TSQ+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFKK+AI WAWE ST
Sbjct: 62 RPAPSPRATTSQKCIRTNDIENVGRTARHHTFFEMLGNFSFGDYFKKDAIAWAWELSTEV 121
Query: 159 FGLPANRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYY 218
+ LP RL +SV+ DDD+AF +W VG+P I RMG +DNFW SG TGPCGPCSEIYY
Sbjct: 122 YKLPPERLVVSVFRDDDDAFALWRDHVGIPPHRIIRMGEEDNFWASGPTGPCGPCSEIYY 181
Query: 219 DFHPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQ 278
DFHP+ G +DL DD+RFIEFYNLVFMQYN+ +G L PL+ +NIDTG+GLER+A+ILQ
Sbjct: 182 DFHPELGDDHLDLEDDSRFIEFYNLVFMQYNRDTEGHLTPLQNQNIDTGMGLERMAQILQ 241
Query: 279 KVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNI 338
+VPNNYETDLIFPII+ A++LA ++Y QS+++T ++LK+IGDH+RA++++++DG+ SN
Sbjct: 242 RVPNNYETDLIFPIIETAAQLAGLNYYQSDEKTQVSLKVIGDHVRAVIHMVADGITASNG 301
Query: 339 GRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRI 398
GRGYV+RRLIRR VR GRLLGI EGAF+ +A AI+LS +V+ RE I
Sbjct: 302 GRGYVLRRLIRRVVRHGRLLGI--------EGAFISRVAAAAIQLSETAFPNVREREGAI 353
Query: 399 LEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEI 458
EL REE RF++TLERGEKLL ++LA A ++SG DAF+LYDT+GFP+E+
Sbjct: 354 TAELDREEARFLETLERGEKLLTEILAQAQG---------QISGADAFVLYDTYGFPLEL 404
Query: 459 TKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDT 517
T+E+AEE G++VD GF + M QR++S+ AH + L+ S D LA+ I TEF+GYD
Sbjct: 405 TQEIAEEQGLTVDEAGFAVSMAEQRQRSKDAHETIDLTAQGSLDRLADAIHPTEFIGYDA 464
Query: 518 LSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTA 577
+ V +L+VNG V G++V+V+L TPFY ESGGQ+GD G+L +
Sbjct: 465 AVGTSAVAALMVNGVGRETVPAGTEVQVVLAETPFYGESGGQVGDRGYL------AGEDF 518
Query: 578 VVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKK 637
V+ V+DV+K G F+H+G + G VG +V A +D R+R +HTATHLLQAALKK
Sbjct: 519 VIRVEDVQKESG-FFLHRGRVERGTATVGAQVTAQIDRACRRRVMANHTATHLLQAALKK 577
Query: 638 VIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDA 697
+ + SQAGSLV FDRLRFDFN R L E++++E +N WI +++ + VM ++ A
Sbjct: 578 RVSDDISQAGSLVDFDRLRFDFNCPRALTPEEVQQVEEQVNTWIAESHGAEVAVMPIEAA 637
Query: 698 KRAGAIAMFGEKYGEQVKI 716
K GAIAMFGEKYG +V++
Sbjct: 638 KAKGAIAMFGEKYGAEVRV 656
>gi|145348968|ref|XP_001418913.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|313471499|sp|A4S051.1|SYAP_OSTLU RecName: Full=Probable alanine--tRNA ligase, chloroplastic;
AltName: Full=Alanyl-tRNA synthetase; Short=AlaRS
gi|144579143|gb|ABO97206.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 906
Score = 750 bits (1937), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/675 (55%), Positives = 491/675 (72%), Gaps = 22/675 (3%)
Query: 48 SSGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
+SG +IR+RFL FY +RGH VLPS+SLVPEDPTVLLTIAGMLQFKP+F+G+ R RA
Sbjct: 22 NSGAAIRQRFLKFYETRGHAVLPSSSLVPEDPTVLLTIAGMLQFKPVFMGQRERAHERAT 81
Query: 108 TSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
T+Q+C+RTND+ENVG T+RHHTFFEMLGNFSFGDYFKK+A QWAWE +T EFGL R+W
Sbjct: 82 TTQKCVRTNDIENVGVTARHHTFFEMLGNFSFGDYFKKDACQWAWELATGEFGLNPERVW 141
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCS 227
+SV+ +DDEAF IW VGVP IKRM DNFW +G TGPCGPCSE+YYDF+P+RG
Sbjct: 142 VSVFREDDEAFAIWRDVVGVPESRIKRMDEKDNFWAAGPTGPCGPCSELYYDFYPERGLE 201
Query: 228 DVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETD 287
DL DD+RFIEFYNLVFM+ N+ DG + PLK KNIDTG+GLER+A+ILQ VPNNYETD
Sbjct: 202 GADLDDDSRFIEFYNLVFMELNRDADGGVTPLKNKNIDTGMGLERMAQILQGVPNNYETD 261
Query: 288 LIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRL 347
LI PII KA+ +A + Y ND LK+IGDH RA+ Y++SDGVF SNIGRGY+VRRL
Sbjct: 262 LIMPIINKAASMAGIDYNACNDVQKQQLKVIGDHTRAVSYMISDGVFASNIGRGYIVRRL 321
Query: 348 IRRAVRTGRLLGIKGDGRGNLEG--AFLPSIAEKAIELSTHIDSDVKAREQRILEELKRE 405
+RR VR GRLLGIK + EG AF P+IAE AI +S D V RIL EL+RE
Sbjct: 322 LRRVVRNGRLLGIKPE-----EGASAFTPAIAEVAISMSEGCDPQVAKNSARILAELERE 376
Query: 406 ELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEE 465
EL F +TL RGE++L +++ A + ++G LSG+DAF LYDT+GFP++IT +VA E
Sbjct: 377 ELSFQKTLGRGEEMLAELIETA--KKTKTG----LSGKDAFTLYDTYGFPLDITADVATE 430
Query: 466 HGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDS-ADLAEKI-PDTEFLGYDTLSAK-A 522
G++VD++GF+ M QR SQAAH V ++ ++ A +A+++ + F+GY++ S+ +
Sbjct: 431 AGITVDLEGFESAMAEQRSMSQAAHQTVDVTAGNALARVADELGAKSTFIGYESTSSDVS 490
Query: 523 IVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVK 582
V +++ G+ V + +G+ V+++L+ TPFYAESGGQ+GD G L+ G A +EV
Sbjct: 491 NVLAIVCGGESVEEAPEGAKVDIVLDVTPFYAESGGQVGDNGVLHTADG-----ATLEVS 545
Query: 583 DVKKSLGS-VFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQ 641
DV+K+ G + VH T+ +G ++ G +V A VD R+RAK +HTATHLLQ+ALKKV+G+
Sbjct: 546 DVQKAGGGRIIVHTATVTKGSIKKGSQVTANVDENSRRRAKSNHTATHLLQSALKKVLGE 605
Query: 642 ETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAG 701
+ SQAGSL FDRLRFDFN + + +L E+E L+NGWI + L + M + AK G
Sbjct: 606 DVSQAGSLCGFDRLRFDFNSPKAPTEAQLLEVENLVNGWISQSAALTAEEMPIAAAKDKG 665
Query: 702 AIAMFGEKYGEQVKI 716
A MFGEKYG+ V++
Sbjct: 666 ATMMFGEKYGDVVRV 680
>gi|428297619|ref|YP_007135925.1| alanyl-tRNA synthetase [Calothrix sp. PCC 6303]
gi|428234163|gb|AFY99952.1| alanyl-tRNA synthetase [Calothrix sp. PCC 6303]
Length = 881
Score = 749 bits (1934), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/669 (55%), Positives = 487/669 (72%), Gaps = 21/669 (3%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
SG+ IR++FLDF+A R H++LPSASLVPEDPTVLLTIAGML FKPIFLG+ + RA T
Sbjct: 9 SGNEIRQKFLDFFAERQHQILPSASLVPEDPTVLLTIAGMLPFKPIFLGQRSSEYKRATT 68
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
SQ+CIRTND+ENVGRT RHHTFFEMLGNFSFGDYFK++AI W WE ST FG L +
Sbjct: 69 SQKCIRTNDIENVGRTKRHHTFFEMLGNFSFGDYFKEQAIAWGWEISTQTFGFSPQNLVV 128
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
SV+E+DDEAF IW ++GV + IKRMGADDNFW SGATGPCGPCSEIYYDFHP+ G
Sbjct: 129 SVFEEDDEAFAIWRDQIGVSEKRIKRMGADDNFWASGATGPCGPCSEIYYDFHPELGEDH 188
Query: 229 VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDL 288
+DL DDTRFIEFYNLVFMQYN+ +G+L PL KNIDTG+GLER+A+ILQKVPNNYETDL
Sbjct: 189 IDLEDDTRFIEFYNLVFMQYNRDAEGNLTPLANKNIDTGMGLERMAQILQKVPNNYETDL 248
Query: 289 IFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLI 348
I PII+ A+ +A + Y S+++T ++LK+IGDH+RA+V++++DG+ SN+GRGY++RRLI
Sbjct: 249 ILPIIQTAATIAGIDYGNSDEKTKVSLKVIGDHVRAVVHMIADGIRASNVGRGYILRRLI 308
Query: 349 RRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELR 408
RR VR GRL+GI G+ F +A+ AI LS +V+ R I E++REE
Sbjct: 309 RRVVRHGRLIGISGE--------FTTQVAQTAISLSESAYPNVRDRIDTITGEMQREEAN 360
Query: 409 FVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGV 468
F++TLERGEKLL++++ D ++ ++SG++AF L+DT+GFP E+T+E+AEEH +
Sbjct: 361 FLKTLERGEKLLEKIITDVAAKGE-----TQISGENAFKLFDTYGFPFELTQEIAEEHHL 415
Query: 469 SVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLSAKAIVESL 527
+VD GF EME Q++ + AH + L+V + D LAE I TEF+GY ++ A +E L
Sbjct: 416 TVDDVGFQQEMEKQKQMGRDAHETIDLTVQGTLDKLAENIHSTEFVGYSKTASTAKIEVL 475
Query: 528 LVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVKKS 587
LV G P G+ V+++LN TPFYAESGGQ+GD G+L + V+ + DVKK
Sbjct: 476 LVGGVPEEAAEAGTQVQIVLNETPFYAESGGQVGDKGYL------SGDDLVIRITDVKKE 529
Query: 588 LGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQAG 647
FVH G + G + +G V A +D R+RA +H+ATHLLQAAL+K++ + SQAG
Sbjct: 530 -SDFFVHFGKVERGTIRLGDGVTAQIDRACRRRAAANHSATHLLQAALRKIVDGDISQAG 588
Query: 648 SLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAMFG 707
SLV FDRLRFDFN R L E++++E +N WI +A + Q VM + +AK GA AMFG
Sbjct: 589 SLVNFDRLRFDFNCPRSLTPAEVQQVEEQVNAWIAEAYIAQIDVMPIAEAKARGATAMFG 648
Query: 708 EKYGEQVKI 716
EKYG++V++
Sbjct: 649 EKYGDEVRV 657
>gi|159476100|ref|XP_001696152.1| hypothetical protein CHLREDRAFT_119554 [Chlamydomonas reinhardtii]
gi|158275323|gb|EDP01101.1| predicted protein [Chlamydomonas reinhardtii]
Length = 879
Score = 746 bits (1925), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/670 (57%), Positives = 471/670 (70%), Gaps = 17/670 (2%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
+G IR+ FL FY S+GH LPS+SLVPEDPTVLLTIAGMLQFKP+FLG+ PR+V A T
Sbjct: 1 TGAEIREAFLSFYESKGHTRLPSSSLVPEDPTVLLTIAGMLQFKPVFLGQAPRKVATATT 60
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
+Q+C+RTND+ NVG T+RHHTFFEMLGNFSFGDYFK++AI+WAWE ST FGLPA R+W+
Sbjct: 61 TQKCVRTNDIGNVGVTARHHTFFEMLGNFSFGDYFKEQAIKWAWELSTGVFGLPAERVWV 120
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
SVYE+D EA IW VGV E IKRMGA DNFW+SG TGPCGPCSE+YYDFHP+RG D
Sbjct: 121 SVYEEDAEAEAIWRDVVGVAPERIKRMGAADNFWSSGPTGPCGPCSELYYDFHPERGTQD 180
Query: 229 VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDL 288
L DD+RFIEFYNLVFMQ N+ DGSLEPL KNIDTG+GLER+A+ILQ V NNYETDL
Sbjct: 181 ASLEDDSRFIEFYNLVFMQLNRCPDGSLEPLAAKNIDTGMGLERMAQILQGVSNNYETDL 240
Query: 289 IFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLI 348
IFPI+ KA+ +A V YA + LK+IGDH RA+ Y+LSDGV PSN GRGYV+RRL+
Sbjct: 241 IFPIVAKAAAIAGVDYASAQPAVKTALKVIGDHTRAVTYMLSDGVTPSNTGRGYVLRRLL 300
Query: 349 RRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELR 408
RR V GRLLGI+ F P++AE A+ LS D V+ QRI +EL REE
Sbjct: 301 RRVVMKGRLLGIR--------EVFTPAVAEVAVALSAACDPAVQRNAQRIYDELAREESL 352
Query: 409 FVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGV 468
F TLERG+K LD+ L R + ++G DAF+LYDTFGFP+E+T+E+AE GV
Sbjct: 353 FATTLERGQKQLDEYL------DRAAAGGKAIAGPDAFMLYDTFGFPLELTQELAEARGV 406
Query: 469 SVDMKGFDIEMENQRRQSQAAHNAV-KLSVDDSADLAEKIPDTEFLGYDTLSAKAIVESL 527
VD+ GF+ EME QR++S+ + + + A LA + T F GY V L
Sbjct: 407 DVDVSGFEAEMEAQRQRSKDSRETLDLTAQAGLAALAAAVGPTAFTGYSATRGAGRVRGL 466
Query: 528 LVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVKKS 587
+ G PV V G EVLL+ TPFYAESGGQ+GD G L G+ + A + V D +K+
Sbjct: 467 MRGGAPVEVVEAGDRCEVLLDSTPFYAESGGQVGDMGVL-TAHGSGEAAAELSVSDCQKA 525
Query: 588 L-GSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQA 646
GSVFVH ++ G L VG +V A+VD LR+R + HHTATHLLQ+ALK V+G +T Q
Sbjct: 526 AGGSVFVHTCEVKAGQLRVGDQVTALVDEDLRRRVRAHHTATHLLQSALKAVLGPDTCQQ 585
Query: 647 GSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAMF 706
GSL F RLRFDFN R + E+ E+ERL+NGW+ A L+T+VM L AK AGA AMF
Sbjct: 586 GSLCNFQRLRFDFNLARGMTAAEVAEVERLVNGWVAAAAPLETRVMDLAAAKAAGATAMF 645
Query: 707 GEKYGEQVKI 716
GEKY + V++
Sbjct: 646 GEKYDDTVRV 655
>gi|359460971|ref|ZP_09249534.1| alanyl-tRNA synthetase [Acaryochloris sp. CCMEE 5410]
Length = 873
Score = 746 bits (1925), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/669 (55%), Positives = 502/669 (75%), Gaps = 25/669 (3%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
SG IR+ FLDFYA++GHK+LPSASLVPEDPTVLLTIAGML FKPIFLG+ +VPRA T
Sbjct: 6 SGAQIRQTFLDFYAAKGHKILPSASLVPEDPTVLLTIAGMLPFKPIFLGQREAEVPRATT 65
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
SQ+CIRTND+ENVG+T+RHHT+FEMLGNFSFGDYFK++AI WAWE ST + LP +R+
Sbjct: 66 SQKCIRTNDIENVGQTARHHTYFEMLGNFSFGDYFKEQAIAWAWELSTEVYKLPPDRIVP 125
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
SV+E+DDEAF IW ++G+P I+RMGA+DNFW SG TGPCGPCSE+YYDFHP++G
Sbjct: 126 SVFEEDDEAFAIWRDKIGIPEHRIQRMGAEDNFWASGPTGPCGPCSELYYDFHPEKGDDK 185
Query: 229 VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDL 288
+DL DDTRFIE+YNLVFM+YN+ +G+L PLK KNIDTGLGLER+A+ILQ V NNYETDL
Sbjct: 186 IDLEDDTRFIEYYNLVFMEYNQDSEGNLTPLKNKNIDTGLGLERMAQILQGVSNNYETDL 245
Query: 289 IFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLI 348
IFPII+ A+++A + Y +S +T +LK++GDH+R++V +++DG+ SN+GRGYV+RRLI
Sbjct: 246 IFPIIETAAKIAGIKYKKSKAKTKTSLKVVGDHVRSVVQMIADGITASNVGRGYVLRRLI 305
Query: 349 RRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELR 408
RR VR G+L+GI +GAF+ +AE AI +V+ RE+ + EL+REE +
Sbjct: 306 RRVVRHGQLIGI--------DGAFITQVAETAIASLEVAYPEVREREKIVKTELEREEAQ 357
Query: 409 FVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGV 468
F++TL RGEKLL +++A ++SG+DAF LYDT+GFP+E+T+E+A E G+
Sbjct: 358 FLKTLNRGEKLLGEIMAK---------KPKQISGKDAFDLYDTYGFPLELTQEIAAEQGL 408
Query: 469 SVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLSAKAIVESL 527
+VD GF M+ Q+ + ++AH + L+V + + LA + T+FLGY SAKA V +L
Sbjct: 409 TVDEGGFAKAMKEQQDRGRSAHKTIDLTVQSALEQLAATVHPTDFLGYTDFSAKAKVAAL 468
Query: 528 LVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVKKS 587
LV G+ V + S GS+V+++L++TPFYAESGGQIGD G+L N + VV ++DV+K
Sbjct: 469 LVKGETVDQASAGSEVQIVLDQTPFYAESGGQIGDRGYL------NGKDVVVRIEDVQKE 522
Query: 588 LGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQAG 647
+F+H G I G L+ G ++ A +D R++ + HHTATHLLQAALK ++ + QAG
Sbjct: 523 -SDIFIHYGRIERGTLKKGDKLTAQIDLACRRQVQAHHTATHLLQAALKNIVDESIGQAG 581
Query: 648 SLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAMFG 707
SLVAFDRLRFDFN+++ + +++EIE IN WI +A+ +T+VM + +AK GA+AMFG
Sbjct: 582 SLVAFDRLRFDFNYNQAVTPEQIQEIETQINTWIAEAHGTETEVMTIAEAKAKGAVAMFG 641
Query: 708 EKYGEQVKI 716
EKYG +V++
Sbjct: 642 EKYGSEVRV 650
>gi|37521917|ref|NP_925294.1| alanyl-tRNA synthetase [Gloeobacter violaceus PCC 7421]
gi|44888325|sp|Q7NI36.1|SYA_GLOVI RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|35212916|dbj|BAC90289.1| alanyl-tRNA synthetase [Gloeobacter violaceus PCC 7421]
Length = 871
Score = 745 bits (1924), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/668 (53%), Positives = 483/668 (72%), Gaps = 27/668 (4%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
+G++IR++FL F+ S+ H+ LPSASLVP+DPTVLLTIAGML FKP+F+GK R PR T
Sbjct: 6 NGNAIREKFLQFFESKQHRRLPSASLVPDDPTVLLTIAGMLPFKPVFMGKRERPAPRVTT 65
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
SQ+C+RTND+ENVGRT+RHHTFFEMLGNFSFGDYFK+EAI WAWE T F LP RLW+
Sbjct: 66 SQKCVRTNDIENVGRTARHHTFFEMLGNFSFGDYFKREAIGWAWELVTGVFELPPERLWV 125
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
SVYE+D+EA +W + G+P +++MGAD NFW SG TGPCGPCSEIYYDFHP+RG D
Sbjct: 126 SVYEEDEEALVLWQEVAGLPPVRVRKMGADSNFWESGPTGPCGPCSEIYYDFHPERGEGD 185
Query: 229 VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDL 288
+DL DD+RF+E YNLVFMQ N+ +G+ L +KNIDTGLGLER+A++LQ VPNNYETDL
Sbjct: 186 IDLDDDSRFLEIYNLVFMQLNRDSEGTFSELPRKNIDTGLGLERMAQVLQGVPNNYETDL 245
Query: 289 IFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLI 348
+FPII+KA L+ Y +++D+ + KIIGDH RA+V+L++DGV P N+GRGY++RRLI
Sbjct: 246 VFPIIRKAEVLSGRDYFKADDQQKTSFKIIGDHTRAVVHLVADGVLPGNLGRGYILRRLI 305
Query: 349 RRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELR 408
RR VR GR+LGI G+FLP +A A+EL ++ + IL L EE +
Sbjct: 306 RRMVRHGRMLGIA--------GSFLPQMATVAVELMGGAYPNLLESRELILTRLATEESQ 357
Query: 409 FVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGV 468
F+QTLE GE+LLD++L S R+SG DAF+LYDT+GFP+E+T EVA E G+
Sbjct: 358 FLQTLETGERLLDEILGR---------SEKRISGVDAFMLYDTYGFPLELTMEVAAERGL 408
Query: 469 SVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTLSAKAIVESLL 528
VD+ ++ ME QR +++ A V L+ A LA+ + T+FLGY +++KA+V+ +L
Sbjct: 409 EVDVAAYEEAMEKQRERARRAAKTVDLT--QGASLAD-LERTDFLGYRNVASKAMVKLVL 465
Query: 529 VNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVKKSL 588
G+P+ + S G+ V+++L++TPFY E GGQIGD G+L + +V ++DV+K
Sbjct: 466 FEGEPIERASAGASVQLVLDQTPFYPEGGGQIGDRGYL------SGPDLLVRIEDVQKR- 518
Query: 589 GSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQAGS 648
+V +H G I G + G V+A +D R+R++ HHTATHLLQAALKKV+G+ Q GS
Sbjct: 519 DTVILHTGRIERGTVATGDSVQAQIDLADRRRSQAHHTATHLLQAALKKVLGESVQQQGS 578
Query: 649 LVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAMFGE 708
LVAFDRLRFDF++ + L E++++E L+N WI +A+ L +VM +D AK GA+A FGE
Sbjct: 579 LVAFDRLRFDFSWPKALSQAEIQQVEDLVNTWIAEAHTLSQEVMPIDQAKARGALAFFGE 638
Query: 709 KYGEQVKI 716
KYG +V++
Sbjct: 639 KYGSEVRV 646
>gi|427420950|ref|ZP_18911133.1| alanyl-tRNA synthetase [Leptolyngbya sp. PCC 7375]
gi|425756827|gb|EKU97681.1| alanyl-tRNA synthetase [Leptolyngbya sp. PCC 7375]
Length = 879
Score = 745 bits (1924), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/670 (55%), Positives = 504/670 (75%), Gaps = 27/670 (4%)
Query: 48 SSGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
++G IR+ FL FY ++GHK+LPSASLVPEDPTVLLTIAGML FKPIFLG+ V RA
Sbjct: 13 TTGAGIRQAFLKFYEAKGHKILPSASLVPEDPTVLLTIAGMLPFKPIFLGQRKAPVDRAT 72
Query: 108 TSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
TSQ+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFK++A+ WAWE ST F L L
Sbjct: 73 TSQKCIRTNDIENVGRTARHHTFFEMLGNFSFGDYFKEQAVAWAWELSTEVFKLAPQNLV 132
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCS 227
+SV+ +DDEA+ IW +VGVP + I RMG +DNFW SG TGPCGPCSEIYYDFHP++G
Sbjct: 133 VSVFREDDEAYAIWRDQVGVPEKRIIRMGEEDNFWKSGPTGPCGPCSEIYYDFHPEKGDD 192
Query: 228 DVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETD 287
D+DL DDTRFIEFYNLVFMQYN+ +G+L PL+ +NIDTG+GLER+A+ILQK PNNYETD
Sbjct: 193 DIDLEDDTRFIEFYNLVFMQYNRDAEGNLTPLQAQNIDTGMGLERMAQILQKKPNNYETD 252
Query: 288 LIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRL 347
LIFPII+ A+++A V Y + ++ ++LK+IGDH+R++V+++SDG+ SN+GRGY++RRL
Sbjct: 253 LIFPIIQTAADIAKVDYFKQDESAKVSLKVIGDHVRSVVHMISDGITASNVGRGYILRRL 312
Query: 348 IRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREEL 407
IRR VR GRLLG ++GAF+ +AE AI L D++ RE I EL+REE
Sbjct: 313 IRRVVRHGRLLG--------MDGAFINQVAESAIALCESAYPDLREREDIIKAELQREED 364
Query: 408 RFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHG 467
+F++TLERGEKL LA+ L R + ++SG +AF L+DTFGFP+E+T+E+AEE+G
Sbjct: 365 QFLKTLERGEKL----LAEILERKPK-----QISGVEAFKLFDTFGFPLELTQEIAEENG 415
Query: 468 VSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAE-KIPDTEFLGYDTLSAKAIVES 526
++VD++GF++EM QR +S++AH + L +L+E + T+FLGY ++++ V +
Sbjct: 416 LTVDVEGFEVEMAAQRERSKSAHETIDLLA--QGNLSELGLDSTDFLGYTNATSQSTVRA 473
Query: 527 LLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVKK 586
+LVNG+ V G++V+++L++TPFYAESGGQIGD GFL + T V+ ++DV+K
Sbjct: 474 ILVNGETVETAEAGTEVQLILDQTPFYAESGGQIGDRGFL------SGDTLVIRIEDVQK 527
Query: 587 SLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQA 646
++F+H G + G L+VG V A +D R+RA+ +HTATHLLQAALKK++ SQA
Sbjct: 528 D-NTLFIHLGRVERGTLKVGDSVSAQIDRACRRRAQANHTATHLLQAALKKLVDDNISQA 586
Query: 647 GSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAMF 706
GSLV+FDRLRFDFN R L E++++E +N WI +A+ Q VM +DDAK GAIAMF
Sbjct: 587 GSLVSFDRLRFDFNCPRALTAAEVQQVEAQVNTWIAEAHGAQVDVMPIDDAKAKGAIAMF 646
Query: 707 GEKYGEQVKI 716
GEKYG++V++
Sbjct: 647 GEKYGDEVRV 656
>gi|308805977|ref|XP_003080300.1| COG0013: Alanyl-tRNA synthetase (ISS) [Ostreococcus tauri]
gi|122158402|sp|Q015G2.1|SYAP_OSTTA RecName: Full=Probable alanine--tRNA ligase, chloroplastic;
AltName: Full=Alanyl-tRNA synthetase; Short=AlaRS
gi|116058760|emb|CAL54467.1| COG0013: Alanyl-tRNA synthetase (ISS) [Ostreococcus tauri]
Length = 945
Score = 745 bits (1924), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/674 (56%), Positives = 495/674 (73%), Gaps = 20/674 (2%)
Query: 48 SSGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
+SG IR+RFL+FY +RGH PSASLVPEDPTVLLTIAGMLQFKP+F+G+ R++PRA
Sbjct: 62 NSGRGIRRRFLEFYEARGHSRQPSASLVPEDPTVLLTIAGMLQFKPVFMGQREREMPRAT 121
Query: 108 TSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
T+Q+C+RTND+ENVG T+RHHTFFEMLGNFSFGDYFK+EA +WAWE +T EFGL R+W
Sbjct: 122 TTQKCVRTNDIENVGVTARHHTFFEMLGNFSFGDYFKREACEWAWELATNEFGLNPERVW 181
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCS 227
+SV+ +DDEAF IW VGVP IKRM DNFW +G TGPCGPCSE+YYDFHP+RG
Sbjct: 182 VSVFREDDEAFAIWRDVVGVPESRIKRMDEKDNFWAAGPTGPCGPCSELYYDFHPERGLD 241
Query: 228 DVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETD 287
DL DD+RFIEFYNLVFM+ N+ DG ++PLK KNIDTG+GLER+A+ILQ V NNYETD
Sbjct: 242 GADLDDDSRFIEFYNLVFMELNRDADGGIKPLKNKNIDTGMGLERMAQILQGVSNNYETD 301
Query: 288 LIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRL 347
LI PII KA+ +A + YA + LK+IGDH RA+ Y++SDGVF SNIGRGY+VRRL
Sbjct: 302 LIRPIIDKAASMAGLDYASCSATQKQQLKVIGDHTRAVTYMISDGVFASNIGRGYIVRRL 361
Query: 348 IRRAVRTGRLLGIK-GDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREE 406
+RR VR GRLLGIK DG + AF PSIAE AI +S D V RIL EL+REE
Sbjct: 362 LRRVVRNGRLLGIKPADG----QSAFTPSIAEVAISMSEECDPQVVKNTARILAELEREE 417
Query: 407 LRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEH 466
L F +TL RGE +MLA+ + + ++S S LSG+DAF LYDT+GFP++IT +VA E
Sbjct: 418 LSFQKTLGRGE----EMLAELIEKAKDSKS--GLSGKDAFTLYDTYGFPLDITTDVASEA 471
Query: 467 GVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDS-ADLAEKIPD-TEFLGYDTLSAK-AI 523
G++VD++GF+ M QR SQAAH V ++ ++ A +A+++ +EF+GYD +S+ +
Sbjct: 472 GIAVDLEGFEKAMAEQRSMSQAAHQTVDVTAGNALAQVADELGAMSEFIGYDNISSDVSN 531
Query: 524 VESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKD 583
V +++ G+ V + S G+ V+V+L+ TPFYAESGGQ+GD GFL+ G AV++V D
Sbjct: 532 VLAIVSGGESVEEASGGARVDVVLDVTPFYAESGGQVGDNGFLHSADG-----AVLKVTD 586
Query: 584 VKKSLGS-VFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQE 642
V+K+ G + VH T+ +G ++ G +V A VD R+RA+ +HTATHLLQ+ALKKV+G +
Sbjct: 587 VQKAGGGRIIVHSATVVKGSIKKGSQVSANVDENARRRARNNHTATHLLQSALKKVLGDD 646
Query: 643 TSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGA 702
SQAGSL FDRLRFDFN + + + +L E+E L+NGWI + L + M + AK GA
Sbjct: 647 VSQAGSLCGFDRLRFDFNCPKAVTEAQLLEVETLVNGWISQSADLTAEEMPIAAAKEKGA 706
Query: 703 IAMFGEKYGEQVKI 716
MFGEKYG+ V++
Sbjct: 707 TMMFGEKYGDVVRV 720
>gi|298491784|ref|YP_003721961.1| alanyl-tRNA synthetase ['Nostoc azollae' 0708]
gi|298233702|gb|ADI64838.1| alanyl-tRNA synthetase ['Nostoc azollae' 0708]
Length = 880
Score = 742 bits (1915), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/669 (55%), Positives = 492/669 (73%), Gaps = 21/669 (3%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
SG+ IR FLDFY RGH++LPSASLVPEDPTVLLTIAGML FKPIFLG+ RA T
Sbjct: 9 SGNDIRALFLDFYTQRGHELLPSASLVPEDPTVLLTIAGMLPFKPIFLGQRTPDFKRATT 68
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
SQ+CIRTND+ENVGRT RHHTFFEMLGNFSFGDYFK++AI W WE ST F LP RL +
Sbjct: 69 SQKCIRTNDIENVGRTKRHHTFFEMLGNFSFGDYFKEQAIAWGWELSTQVFRLPPERLVV 128
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
SV+E+DDEAF IW ++GV + IKRMGAD+NFW SG TGPCGPCSEI+YDFHP+ G +
Sbjct: 129 SVFEEDDEAFGIWRDKIGVNEKRIKRMGADENFWVSGPTGPCGPCSEIHYDFHPELGEDN 188
Query: 229 VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDL 288
+DL DD+RFIEFYNLVFMQYN+ +L PL+ KNIDTG+GLER+A+ILQ PNNYETDL
Sbjct: 189 IDLEDDSRFIEFYNLVFMQYNRDASENLTPLQNKNIDTGMGLERMAQILQNKPNNYETDL 248
Query: 289 IFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLI 348
IFPII+ A+++A + Y S++ T ++LK+IGDH+R++V++++D + SN+GRGYV+RRLI
Sbjct: 249 IFPIIETAAKVAKIDYHHSDEDTKVSLKVIGDHIRSVVHMIADEIRASNVGRGYVLRRLI 308
Query: 349 RRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELR 408
RR VR GRL+GI + F+ +AE+AI LS + +++ RE I EL+REE
Sbjct: 309 RRVVRHGRLIGICEE--------FINQVAERAISLSESVYPNLRQREASIKAELQREEAN 360
Query: 409 FVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGV 468
F++TL+RGEKL LA+ + ++ G + +SG+ AF LYDT+GFP+E+T+EVAEE+ +
Sbjct: 361 FLKTLDRGEKL----LAEIIQEVKQKG-LTSMSGKSAFTLYDTYGFPLELTQEVAEENNL 415
Query: 469 SVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLSAKAIVESL 527
+VD+ GF+ EM+ Q +++AAH + L+V S D L E I TEF+GY + A VE L
Sbjct: 416 TVDVDGFNAEMQKQVERAKAAHETIDLTVQGSLDKLVEHIHTTEFIGYTAAATTAKVEVL 475
Query: 528 LVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVKKS 587
LV G G +V+++L+RTPFYAESGGQIGD G++ + +V V++VKK
Sbjct: 476 LVGGISEETAEAGREVQIVLDRTPFYAESGGQIGDKGYI------SGDGVLVRVEEVKKE 529
Query: 588 LGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQAG 647
FVH G I G L +G V+A ++ R+R++ +HTATHLLQAALKKV+ + SQAG
Sbjct: 530 -SDFFVHFGHIESGTLRIGDNVKAQINTAYRRRSQANHTATHLLQAALKKVVDEGISQAG 588
Query: 648 SLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAMFG 707
SLV+FDRLRFDFN R L E+++IE L+N WI +A+ + +V+ L +AK GA+AMFG
Sbjct: 589 SLVSFDRLRFDFNCPRALTSEEVQQIEELVNTWISEAHSAKIEVLPLAEAKARGAVAMFG 648
Query: 708 EKYGEQVKI 716
EKYG +V++
Sbjct: 649 EKYGNEVRV 657
>gi|427719909|ref|YP_007067903.1| alanyl-tRNA synthetase [Calothrix sp. PCC 7507]
gi|427352345|gb|AFY35069.1| alanyl-tRNA synthetase [Calothrix sp. PCC 7507]
Length = 908
Score = 741 bits (1913), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/692 (54%), Positives = 493/692 (71%), Gaps = 39/692 (5%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
SG IR RFL+FYA RGH++LPSASLVPEDPTVLLTIAGML FKPIFLG+ + RA T
Sbjct: 9 SGSEIRSRFLNFYAQRGHQILPSASLVPEDPTVLLTIAGMLPFKPIFLGQRTPEFKRATT 68
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
SQ+CIRTNDVENVGRT RH TFFEMLGNFSFGDYFK++AI W WE ST FGL L +
Sbjct: 69 SQKCIRTNDVENVGRTKRHQTFFEMLGNFSFGDYFKEQAIAWGWEISTEVFGLSPKNLVV 128
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
SV+++DDEA+ IW ++GVP IKR+G DDNFW SG TGPCGPCSEIYYDFHP+RG +
Sbjct: 129 SVFQEDDEAYAIWRDQIGVPEARIKRLGEDDNFWVSGPTGPCGPCSEIYYDFHPERGDEN 188
Query: 229 VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDL 288
+DL DD+RFIEFYNLVFMQYN+ +G+L PL+ +NIDTG+GLERI +ILQ+VPNNYETDL
Sbjct: 189 IDLEDDSRFIEFYNLVFMQYNRDSEGNLTPLQNQNIDTGMGLERITQILQQVPNNYETDL 248
Query: 289 IFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLI 348
IFPII+ A+ +A++ Y S+++T ++LK+IGDH+RA+V++++D + SN+GRGYV+RRLI
Sbjct: 249 IFPIIETAAAIASIDYHASDEKTKISLKVIGDHVRAVVHMIADEIRASNVGRGYVLRRLI 308
Query: 349 RRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELR 408
RR VR GRL+GI G+ F +AE AI L+ +V+ RE I EL+REE
Sbjct: 309 RRVVRHGRLIGISGE--------FTTQVAETAIALAESAYPNVRQREAAIKAELQREESN 360
Query: 409 FVQTLERGEKLLDQMLADALS--------------RTRESGS-------VP--RLSGQDA 445
F++TL+RGEKLL++++ S + R S S +P ++SG DA
Sbjct: 361 FLKTLDRGEKLLEEIINRPSSIRDEQYRPSSIRDEQYRPSSSPEPKVSGLPKQKISGIDA 420
Query: 446 FLLYDTFGFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LA 504
F LYDT+GFP+E+T+E+AEE G+ VD++GF+ EM+ Q +++AAH + L+V S D LA
Sbjct: 421 FTLYDTYGFPLELTQEIAEEQGLEVDVEGFNAEMQKQVERAKAAHQTIDLTVQGSLDKLA 480
Query: 505 EKIPDTEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYG 564
E I TEFLGY A A +E LLV G + G+DV+++LN+TPFYAESGGQIGD G
Sbjct: 481 EHIHATEFLGYTQPVATAKIEVLLVGGVSQEEAEAGTDVQIVLNQTPFYAESGGQIGDRG 540
Query: 565 FLYVTQGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVH 624
++ + V + D F+H G I G + VG V A +D R+R + +
Sbjct: 541 YISGEGVVVRVDDVKKESD-------FFIHSGRIERGTIRVGDAVTAQIDRACRRRLQAN 593
Query: 625 HTATHLLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDA 684
HTATHLLQAALKK++ SQAGSLV+FDRLRFDFN R L E +++E IN WI +A
Sbjct: 594 HTATHLLQAALKKIVDDGISQAGSLVSFDRLRFDFNSPRGLTAEETQQVEEQINTWIAEA 653
Query: 685 NLLQTKVMALDDAKRAGAIAMFGEKYGEQVKI 716
+ + +V+ L +AK GA+AMFGEKYG++V++
Sbjct: 654 HAAKIEVLPLAEAKARGAVAMFGEKYGDEVRV 685
>gi|303277145|ref|XP_003057866.1| predicted protein [Micromonas pusilla CCMP1545]
gi|313471752|sp|C1MR42.1|SYAP_MICPC RecName: Full=Probable alanine--tRNA ligase, chloroplastic;
AltName: Full=Alanyl-tRNA synthetase; Short=AlaRS
gi|226460523|gb|EEH57817.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 899
Score = 740 bits (1911), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/671 (56%), Positives = 482/671 (71%), Gaps = 23/671 (3%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
SG IR+RFL+FY +R H LPS+SLVPEDPTVLLTIAGMLQFKP+F+G+ R+VP A T
Sbjct: 10 SGAGIRRRFLEFYEARDHARLPSSSLVPEDPTVLLTIAGMLQFKPVFMGQEERKVPTATT 69
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
+Q+C+RTND+ENVG T+RHHTFFEMLGNFSFGDYFKKEAI WAWE ST E+GL A+R+WI
Sbjct: 70 TQKCVRTNDIENVGVTARHHTFFEMLGNFSFGDYFKKEAIAWAWEISTKEYGLDASRIWI 129
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGC-S 227
SV+ +DDEA+ IW E+G+P IKRM DNFW +G TGPCGPCSE+Y+DFHP+RG
Sbjct: 130 SVFREDDEAYAIWRDEIGIPENRIKRMDEADNFWAAGPTGPCGPCSELYWDFHPERGVDG 189
Query: 228 DVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETD 287
DL DD+RFIEFYNLVFM+ + DG+++PLK+KNIDTG+GLER+A+ILQ PNNYETD
Sbjct: 190 SEDLDDDSRFIEFYNLVFMESVRDTDGNMKPLKRKNIDTGMGLERMAQILQGKPNNYETD 249
Query: 288 LIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRL 347
LI PII A+ +A +SY ++D T L LK+IGDH RA+ YL+SDGV PSN+GRGY+VRRL
Sbjct: 250 LIRPIIDAAASMAGISYDDADDATKLKLKVIGDHTRAVCYLISDGVLPSNVGRGYIVRRL 309
Query: 348 IRRAVRTGRLLGIKG-DGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREE 406
+RR VR GRLLG+K DG GAF P+IA AI LS D++V Q+I +EL+REE
Sbjct: 310 LRRVVRCGRLLGVKAPDG----AGAFTPAIARVAIGLSEACDANVLKSSQKICDELEREE 365
Query: 407 LRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEH 466
LRF TL RGE++L MLA A +T+++ + P+L+G+DAF LYDT+GFP++IT +VA E
Sbjct: 366 LRFATTLGRGEEILADMLAAA--KTKDA-NAPKLTGEDAFTLYDTYGFPLDITTDVATEA 422
Query: 467 GVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPD-----TEFLGYDTLSAK 521
GV VD+ GF+ M R S+ A AV ++V DL I D T F GY +++ +
Sbjct: 423 GVDVDVDGFEKAMAAARDLSRDARVAVDVTV---GDLLGAIADELGEPTRFTGYGSVTEE 479
Query: 522 AI-VESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVE 580
+ V +LL G+ V G VEV+L+ TPFYAE GGQ+GD G + ++ + +
Sbjct: 480 GVKVRALLKGGERVASAGAGDTVEVVLDATPFYAEGGGQVGDEGEIILSDDRGK----LV 535
Query: 581 VKDVKKSLGS-VFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVI 639
V D +K+ G +FVH + EGV+ G V A V R+RAK +HTATHLLQ+ALK I
Sbjct: 536 VGDCRKAAGGRLFVHSCVVSEGVVGEGDAVTATVSAASRRRAKANHTATHLLQSALKMTI 595
Query: 640 GQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKR 699
G++ SQAGSLV F+RLRFDFN EL +E L+NGWIGDA L + MA+ AK
Sbjct: 596 GEDVSQAGSLVNFERLRFDFNAPSAPTPEELARVESLVNGWIGDAIDLTAEEMAISRAKE 655
Query: 700 AGAIAMFGEKY 710
GA AMFGEKY
Sbjct: 656 KGATAMFGEKY 666
>gi|170078279|ref|YP_001734917.1| alanyl-tRNA synthetase [Synechococcus sp. PCC 7002]
gi|205830236|sp|B1XP68.1|SYA_SYNP2 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|169885948|gb|ACA99661.1| alanyl-tRNA synthetase [Synechococcus sp. PCC 7002]
Length = 877
Score = 739 bits (1909), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/669 (56%), Positives = 486/669 (72%), Gaps = 25/669 (3%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
SG IR +FL+F+ R H +LPSASLVPEDPTVLLTIAGML FKPIFLG+ PRA T
Sbjct: 9 SGSEIRSKFLEFFNQRQHPILPSASLVPEDPTVLLTIAGMLPFKPIFLGQQDAPSPRATT 68
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
SQ+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFK++AI WAWE ST F L + +
Sbjct: 69 SQKCIRTNDIENVGRTARHHTFFEMLGNFSFGDYFKEQAIAWAWELSTEVFQLDPKNIVV 128
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
SV+ +DDEAFEIW +VGV + I RMG +DNFW SG TGPCGPCSE+YYDF P+ G +
Sbjct: 129 SVFREDDEAFEIWRDKVGVNPKRIIRMGEEDNFWKSGPTGPCGPCSELYYDFKPELGDDN 188
Query: 229 VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDL 288
+DL DDTRFIE+YNLVFMQYN+ +G L PL+ KNIDTG+GLER+A+ILQ+VPNNYETDL
Sbjct: 189 IDLEDDTRFIEYYNLVFMQYNRDAEGHLTPLQNKNIDTGMGLERMAQILQQVPNNYETDL 248
Query: 289 IFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLI 348
IFPII+ A++ A + Y +++++T ++LK+IGDH+R++V++++DG+ SN RGYV+RRLI
Sbjct: 249 IFPIIETAAKAAGIHYEKADEKTKVSLKVIGDHVRSVVHMIADGITASNTDRGYVLRRLI 308
Query: 349 RRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELR 408
RR VR GRL+GI G+ F+ +AE AI+LS + + RE I +EL+REE
Sbjct: 309 RRVVRHGRLIGIDGN--------FINQVAETAIQLSEAAYPNTRERESFIKQELEREENN 360
Query: 409 FVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGV 468
F++TLERGEKL LAD +++ + ++SG DAF L+DTFGFP E+T+E+AEE+G+
Sbjct: 361 FLKTLERGEKL----LADIIAKEEK-----QISGVDAFTLFDTFGFPFELTQEIAEENGL 411
Query: 469 SVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLSAKAIVESL 527
+VD +G+ EM+ Q+ +S+AAH + L+V S D LAE I T FLGY L ++ +E++
Sbjct: 412 TVDAEGYQAEMKKQQERSKAAHETIDLTVQGSLDELAEHIHPTAFLGYTDLQSQVKIEAV 471
Query: 528 LVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVKKS 587
LV+G V G V+++ N+TPFYAESGGQIGD G+ Q VV + DV+K
Sbjct: 472 LVDGHRVETAEAGVVVQLICNQTPFYAESGGQIGDRGYFSGDQ------LVVRINDVQKE 525
Query: 588 LGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQAG 647
G FVH G + G L VG V A +D R+RA+ +HTATHLLQAALK ++ SQAG
Sbjct: 526 SG-FFVHHGKVERGSLTVGDTVNATIDRACRRRAQANHTATHLLQAALKNIVDDSISQAG 584
Query: 648 SLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAMFG 707
SLV FDRLRFDFN R L EL +IE IN WI +A+ Q VM + +AK GA+AMFG
Sbjct: 585 SLVDFDRLRFDFNCPRALTAAELTQIEAQINTWIAEAHEGQVAVMPIAEAKAKGAVAMFG 644
Query: 708 EKYGEQVKI 716
EKYGE+V++
Sbjct: 645 EKYGEEVRV 653
>gi|428219304|ref|YP_007103769.1| alanyl-tRNA synthetase [Pseudanabaena sp. PCC 7367]
gi|427991086|gb|AFY71341.1| alanyl-tRNA synthetase [Pseudanabaena sp. PCC 7367]
Length = 879
Score = 739 bits (1909), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/675 (55%), Positives = 483/675 (71%), Gaps = 22/675 (3%)
Query: 43 SQDFPSSGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQ 102
SQ +G IR RFL FY R HK+LPSASLVPEDPTVLLTIAGML FKPIFLG+ P +
Sbjct: 2 SQPPSLTGAEIRDRFLKFYQERSHKLLPSASLVPEDPTVLLTIAGMLPFKPIFLGQKPAE 61
Query: 103 VPRAATSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLP 162
PRA TSQ+C+RTND+ENVGRT+RHHTFFEMLGNFSFGDYFKKEAI W WE T + +P
Sbjct: 62 FPRATTSQKCVRTNDIENVGRTARHHTFFEMLGNFSFGDYFKKEAIAWGWELVTQVYEIP 121
Query: 163 ANRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHP 222
RL +SV+ +DD+AF IW ++G+P I+RMGAD NFW SG TGPCGPCSEI+YDF P
Sbjct: 122 PERLVVSVFHEDDDAFAIWRDDIGIPAHRIQRMGAD-NFWASGPTGPCGPCSEIFYDFKP 180
Query: 223 DRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPN 282
+ G + +DL DD+RF+E YNLVFM+ N+ +G L PLK++NIDTGLGLER+A++LQ+VPN
Sbjct: 181 EEGDNHIDLEDDSRFLEVYNLVFMELNRDSEGKLAPLKKQNIDTGLGLERMAQVLQQVPN 240
Query: 283 NYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGY 342
NYETDLIFPI+K A+++A ++Y +S++ T +LK+IGDH+RA+V++++DG+ SN+GRGY
Sbjct: 241 NYETDLIFPIVKTAADIAGINYHKSDETTKTSLKVIGDHVRAVVHMIADGITASNVGRGY 300
Query: 343 VVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEEL 402
++RRLIRR VR GRL+GI F +AE AI LS +V+ RE I EL
Sbjct: 301 ILRRLIRRVVRHGRLIGIN--------QPFTDKVAEVAIALSEAAYPNVRERETVIKTEL 352
Query: 403 KREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEV 462
+ EE RF+QTLERGE+LL ++LA +T++S ++ +G DAF LYDTFGFP+E+T+E+
Sbjct: 353 QTEEARFLQTLERGEELLAEILAS--PQTQKSKAI---AGADAFKLYDTFGFPLELTEEI 407
Query: 463 AEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVD-DSADLAEKIPDTEFLGYDTLSAK 521
AEE G+ VD+ GF+ EM Q+ +S+ AH + L D LA+K+ TEFLGY SA+
Sbjct: 408 AEEQGLQVDVAGFEAEMAKQQARSKEAHTDIDLMAQTDWLGLAQKVGKTEFLGYANYSAE 467
Query: 522 AIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEV 581
V ++L+NG V G V+V+L+RTPFY ESGGQ+GD G+L + A+V +
Sbjct: 468 VKVLAVLINGVVVESAIAGDRVQVVLDRTPFYGESGGQVGDRGYL------SSGDAIVRI 521
Query: 582 KDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQ 641
DV+K +F+H G I G L V A V R+R HHTATHLLQAALKK++
Sbjct: 522 DDVQKE-ADLFIHIGQIERGSLATDNTVNAQVSMSERRRIMAHHTATHLLQAALKKIVDP 580
Query: 642 ETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAG 701
SQAGSLVA DRLRFDFN R + TEL+++E IN WI +A+ Q VM L+ AK G
Sbjct: 581 SVSQAGSLVAADRLRFDFNLSRAVTTTELQQVELQINNWIAEAHSAQVAVMPLESAKAKG 640
Query: 702 AIAMFGEKYGEQVKI 716
AIAMFGEKY V++
Sbjct: 641 AIAMFGEKYAADVRV 655
>gi|434386478|ref|YP_007097089.1| alanine--tRNA ligase [Chamaesiphon minutus PCC 6605]
gi|428017468|gb|AFY93562.1| alanine--tRNA ligase [Chamaesiphon minutus PCC 6605]
Length = 878
Score = 738 bits (1905), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/669 (55%), Positives = 488/669 (72%), Gaps = 21/669 (3%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
SG IR+ FLDFY+ RGH+ LPS SLVPEDPTVLLTIAGML FKPIFLG+ PRA T
Sbjct: 7 SGAEIRQAFLDFYSQRGHQPLPSGSLVPEDPTVLLTIAGMLPFKPIFLGQRSPDFPRATT 66
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
SQ+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFK++AI+W WE ST F LP RL +
Sbjct: 67 SQKCIRTNDIENVGRTARHHTFFEMLGNFSFGDYFKEQAIEWGWEISTKVFNLPPERLVV 126
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
SV+EDDDEAF +W ++GV IKRMGADDNFW SG TGPCGPCSEIYYDFHP+ G +
Sbjct: 127 SVFEDDDEAFALWRDKIGVNPLRIKRMGADDNFWVSGPTGPCGPCSEIYYDFHPELGNDN 186
Query: 229 VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDL 288
+DL DD+RFIEFYNLVFMQYN+ DG+L PL KNIDTG+GLER+A+ILQ VPNNYETDL
Sbjct: 187 IDLEDDSRFIEFYNLVFMQYNRDVDGNLTPLANKNIDTGMGLERMAQILQDVPNNYETDL 246
Query: 289 IFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLI 348
IFPI++ A+E+A + Y S+++T +LK+IGDH+RAIV++ +DG+ SN+GRGY++RRL+
Sbjct: 247 IFPIVQTAAEIAGIDYNSSDEKTKTSLKVIGDHIRAIVHMNADGIRASNVGRGYILRRLL 306
Query: 349 RRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELR 408
RR VR GR +GI F +AE AI LS +V+++ I EL+REE +
Sbjct: 307 RRVVRHGRSIGINDH--------FTTKVAETAIVLSESAYPNVRSKADSIKAELQREETQ 358
Query: 409 FVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGV 468
F++TLERGEKLL ++ D ++ + +++G DAF LY T+GFP+E+T+E+AEE G+
Sbjct: 359 FLKTLERGEKLLADLIIDVKAK-----GITQINGADAFKLYGTYGFPLELTQEIAEEQGL 413
Query: 469 SVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLSAKAIVESL 527
+VD++G+D E+ + + H + L+V S D LA+ I T+F+GY + A V +L
Sbjct: 414 TVDVEGYDRAKEDDIKNTPDTHGGIDLTVQGSLDKLADTIHATDFIGYHQHHSTAEVVAL 473
Query: 528 LVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVKKS 587
L+ G+ + G +V+++L+++PFYAESGGQIGD G+L G N +V + DVKK
Sbjct: 474 LLAGEVCEEADAGMNVQIVLDKSPFYAESGGQIGDRGYL---SGDN---LLVRIDDVKKE 527
Query: 588 LGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQAG 647
FVH GTI G L VG + A +D R+RA+ +HTATHLLQAALK+++ E SQAG
Sbjct: 528 -SDFFVHFGTIERGNLRVGDTITAQIDTACRRRAQANHTATHLLQAALKQLVDPEISQAG 586
Query: 648 SLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAMFG 707
SLV+FDRLRFDFN R L ++++E L+N WI +A+ + +V+ + AK GA+AMFG
Sbjct: 587 SLVSFDRLRFDFNSPRALTPDRVQQVEELVNTWITEAHSAEIEVIPIAQAKAKGAVAMFG 646
Query: 708 EKYGEQVKI 716
EKYG++V++
Sbjct: 647 EKYGDEVRV 655
>gi|81299685|ref|YP_399893.1| alanyl-tRNA synthetase [Synechococcus elongatus PCC 7942]
gi|81168566|gb|ABB56906.1| alanyl-tRNA synthetase [Synechococcus elongatus PCC 7942]
Length = 899
Score = 738 bits (1905), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/669 (56%), Positives = 485/669 (72%), Gaps = 25/669 (3%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
SGD IR+ FL F+ +GH+ LPSASL+PEDPTVLLTIAGML FKPIFLG+ +VPRA T
Sbjct: 30 SGDQIRETFLKFFEGKGHRRLPSASLIPEDPTVLLTIAGMLPFKPIFLGQQVAEVPRATT 89
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
SQ+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFKKEAI +AWE T F +PA RL +
Sbjct: 90 SQKCIRTNDIENVGRTARHHTFFEMLGNFSFGDYFKKEAIAFAWELVTEVFQVPAERLAV 149
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
SV+E+DDEAF IW ++GVP I+R+GA DNFW SG TGPCGPCSEIYYDFHP+ G
Sbjct: 150 SVFEEDDEAFAIWRDQIGVPEARIQRLGAKDNFWASGPTGPCGPCSEIYYDFHPELGNDG 209
Query: 229 VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDL 288
+DL DD+RFIE YNLVFMQYN+ G+L L+++NIDTG+GLER+A++LQ VPNNYETDL
Sbjct: 210 LDLEDDSRFIEVYNLVFMQYNRDAAGNLTALEKQNIDTGMGLERMAQVLQGVPNNYETDL 269
Query: 289 IFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLI 348
IFPII+ + +A YA ++ ++LK+IGDHLRA+ +L++DGV SN+GRGYV+RRLI
Sbjct: 270 IFPIIQAVAAIAQRDYASESESVKVSLKVIGDHLRAVTHLIADGVTASNLGRGYVLRRLI 329
Query: 349 RRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELR 408
RR VR GRL+GI + F IAE AI L +++ RE I EL REE R
Sbjct: 330 RRVVRHGRLIGI--------DRPFTAEIAETAIALMAAQYPNLREREAAIKAELTREEQR 381
Query: 409 FVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGV 468
F++TLERGEKLL ++LA A + R G+DAF+LYDT+GFP+E+T+E+AEE G+
Sbjct: 382 FLETLERGEKLLAELLAAATDQIR---------GEDAFVLYDTYGFPLELTQEIAEEKGL 432
Query: 469 SVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLSAKAIVESL 527
+VD+ GF+ M QR++SQAAH + L+V S D LAE+I TEF+GY A A V +L
Sbjct: 433 TVDLAGFEAAMAAQRQRSQAAHETIDLTVQGSLDRLAEQIHPTEFVGYGDAVATAKVTAL 492
Query: 528 LVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVKKS 587
L G+ V G V+++L+ TPFYAESGGQ+GD G L ++ +V ++DV+K
Sbjct: 493 LREGQSVEAAEAGDRVQIVLDHTPFYAESGGQVGDRGVL------TGESLIVRIEDVQKE 546
Query: 588 LGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQAG 647
G FVH G I G+L+VG V A +D R+RA+ +HTATHLLQAALK ++ + SQAG
Sbjct: 547 SG-FFVHYGQIERGLLQVGDSVTAQIDRACRRRAQANHTATHLLQAALKLIVDEGISQAG 605
Query: 648 SLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAMFG 707
SLVAFDRLRFDFN R + EL +IE IN WI +A+ +VM + AK GA+AMFG
Sbjct: 606 SLVAFDRLRFDFNCPRAVTPEELRQIEDQINQWIAEAHGTVVEVMPIATAKAKGAVAMFG 665
Query: 708 EKYGEQVKI 716
EKYG +V++
Sbjct: 666 EKYGAEVRV 674
>gi|205830241|sp|Q31PW3.2|SYA_SYNE7 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
Length = 876
Score = 738 bits (1904), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/669 (56%), Positives = 485/669 (72%), Gaps = 25/669 (3%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
SGD IR+ FL F+ +GH+ LPSASL+PEDPTVLLTIAGML FKPIFLG+ +VPRA T
Sbjct: 7 SGDQIRETFLKFFEGKGHRRLPSASLIPEDPTVLLTIAGMLPFKPIFLGQQVAEVPRATT 66
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
SQ+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFKKEAI +AWE T F +PA RL +
Sbjct: 67 SQKCIRTNDIENVGRTARHHTFFEMLGNFSFGDYFKKEAIAFAWELVTEVFQVPAERLAV 126
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
SV+E+DDEAF IW ++GVP I+R+GA DNFW SG TGPCGPCSEIYYDFHP+ G
Sbjct: 127 SVFEEDDEAFAIWRDQIGVPEARIQRLGAKDNFWASGPTGPCGPCSEIYYDFHPELGNDG 186
Query: 229 VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDL 288
+DL DD+RFIE YNLVFMQYN+ G+L L+++NIDTG+GLER+A++LQ VPNNYETDL
Sbjct: 187 LDLEDDSRFIEVYNLVFMQYNRDAAGNLTALEKQNIDTGMGLERMAQVLQGVPNNYETDL 246
Query: 289 IFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLI 348
IFPII+ + +A YA ++ ++LK+IGDHLRA+ +L++DGV SN+GRGYV+RRLI
Sbjct: 247 IFPIIQAVAAIAQRDYASESESVKVSLKVIGDHLRAVTHLIADGVTASNLGRGYVLRRLI 306
Query: 349 RRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELR 408
RR VR GRL+GI + F IAE AI L +++ RE I EL REE R
Sbjct: 307 RRVVRHGRLIGI--------DRPFTAEIAETAIALMAAQYPNLREREAAIKAELTREEQR 358
Query: 409 FVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGV 468
F++TLERGEKLL ++LA A + R G+DAF+LYDT+GFP+E+T+E+AEE G+
Sbjct: 359 FLETLERGEKLLAELLAAATDQIR---------GEDAFVLYDTYGFPLELTQEIAEEKGL 409
Query: 469 SVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLSAKAIVESL 527
+VD+ GF+ M QR++SQAAH + L+V S D LAE+I TEF+GY A A V +L
Sbjct: 410 TVDLAGFEAAMAAQRQRSQAAHETIDLTVQGSLDRLAEQIHPTEFVGYGDAVATAKVTAL 469
Query: 528 LVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVKKS 587
L G+ V G V+++L+ TPFYAESGGQ+GD G L ++ +V ++DV+K
Sbjct: 470 LREGQSVEAAEAGDRVQIVLDHTPFYAESGGQVGDRGVL------TGESLIVRIEDVQKE 523
Query: 588 LGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQAG 647
G FVH G I G+L+VG V A +D R+RA+ +HTATHLLQAALK ++ + SQAG
Sbjct: 524 SG-FFVHYGQIERGLLQVGDSVTAQIDRACRRRAQANHTATHLLQAALKLIVDEGISQAG 582
Query: 648 SLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAMFG 707
SLVAFDRLRFDFN R + EL +IE IN WI +A+ +VM + AK GA+AMFG
Sbjct: 583 SLVAFDRLRFDFNCPRAVTPEELRQIEDQINQWIAEAHGTVVEVMPIATAKAKGAVAMFG 642
Query: 708 EKYGEQVKI 716
EKYG +V++
Sbjct: 643 EKYGAEVRV 651
>gi|56750673|ref|YP_171374.1| alanyl-tRNA synthetase [Synechococcus elongatus PCC 6301]
gi|56685632|dbj|BAD78854.1| alanyl-tRNA synthetase [Synechococcus elongatus PCC 6301]
Length = 892
Score = 736 bits (1901), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/669 (56%), Positives = 485/669 (72%), Gaps = 25/669 (3%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
SGD IR+ FL F+ +GH+ LPSASL+PEDPTVLLTIAGML FKPIFLG+ +VPRA T
Sbjct: 23 SGDQIRETFLKFFEGKGHRRLPSASLIPEDPTVLLTIAGMLPFKPIFLGQQVAEVPRATT 82
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
SQ+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFKKEAI +AWE T F +PA RL +
Sbjct: 83 SQKCIRTNDIENVGRTARHHTFFEMLGNFSFGDYFKKEAIAFAWELVTEVFQVPAERLAV 142
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
SV+E+DDEAF IW ++GVP I+R+GA DNFW SG TGPCGPCSEIYYDFHP+ G
Sbjct: 143 SVFEEDDEAFAIWRDQIGVPEARIQRLGAKDNFWASGPTGPCGPCSEIYYDFHPELGNDG 202
Query: 229 VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDL 288
+DL DD+RFIE YNLVFMQYN+ G+L L+++NIDTG+GLER+A++LQ VPNNYETDL
Sbjct: 203 LDLEDDSRFIEVYNLVFMQYNRDAAGNLTALEKQNIDTGMGLERMAQVLQGVPNNYETDL 262
Query: 289 IFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLI 348
IFPII+ + +A YA ++ ++LK+IGDHLRA+ +L++DGV SN+GRGYV+RRLI
Sbjct: 263 IFPIIQAVAAIAQRDYASESESVKVSLKVIGDHLRAVTHLIADGVTASNLGRGYVLRRLI 322
Query: 349 RRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELR 408
RR VR GRL+GI + F IAE AI L +++ RE I EL REE R
Sbjct: 323 RRVVRHGRLIGI--------DRPFTAEIAETAIALMAAQYPNLREREAAIKAELTREEQR 374
Query: 409 FVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGV 468
F++TLERGEKLL ++LA A + R G+DAF+LYDT+GFP+E+T+E+AEE G+
Sbjct: 375 FLETLERGEKLLAELLAAATDQIR---------GEDAFVLYDTYGFPLELTQEIAEEKGL 425
Query: 469 SVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLSAKAIVESL 527
+VD+ GF+ M QR++SQAAH + L+V S D LAE+I +EF+GY A A V +L
Sbjct: 426 TVDLAGFEAAMAAQRQRSQAAHETIDLTVQGSLDRLAEQIHPSEFVGYGDAVATAKVTAL 485
Query: 528 LVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVKKS 587
L G+ V G V+++L+ TPFYAESGGQ+GD G L ++ +V ++DV+K
Sbjct: 486 LREGQSVEAAEAGDRVQIVLDHTPFYAESGGQVGDRGVL------TGESLIVRIEDVQKE 539
Query: 588 LGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQAG 647
G FVH G I G+L+VG V A +D R+RA+ +HTATHLLQAALK ++ + SQAG
Sbjct: 540 SG-FFVHYGQIERGLLQVGDSVTAQIDRACRRRAQANHTATHLLQAALKLIVDEGISQAG 598
Query: 648 SLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAMFG 707
SLVAFDRLRFDFN R + EL +IE IN WI +A+ +VM + AK GA+AMFG
Sbjct: 599 SLVAFDRLRFDFNCPRAVTPEELRQIEDQINQWIAEAHGTVVEVMPIATAKAKGAVAMFG 658
Query: 708 EKYGEQVKI 716
EKYG +V++
Sbjct: 659 EKYGAEVRV 667
>gi|205371826|sp|Q5N4B5.2|SYA_SYNP6 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
Length = 876
Score = 736 bits (1899), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/669 (56%), Positives = 485/669 (72%), Gaps = 25/669 (3%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
SGD IR+ FL F+ +GH+ LPSASL+PEDPTVLLTIAGML FKPIFLG+ +VPRA T
Sbjct: 7 SGDQIRETFLKFFEGKGHRRLPSASLIPEDPTVLLTIAGMLPFKPIFLGQQVAEVPRATT 66
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
SQ+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFKKEAI +AWE T F +PA RL +
Sbjct: 67 SQKCIRTNDIENVGRTARHHTFFEMLGNFSFGDYFKKEAIAFAWELVTEVFQVPAERLAV 126
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
SV+E+DDEAF IW ++GVP I+R+GA DNFW SG TGPCGPCSEIYYDFHP+ G
Sbjct: 127 SVFEEDDEAFAIWRDQIGVPEARIQRLGAKDNFWASGPTGPCGPCSEIYYDFHPELGNDG 186
Query: 229 VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDL 288
+DL DD+RFIE YNLVFMQYN+ G+L L+++NIDTG+GLER+A++LQ VPNNYETDL
Sbjct: 187 LDLEDDSRFIEVYNLVFMQYNRDAAGNLTALEKQNIDTGMGLERMAQVLQGVPNNYETDL 246
Query: 289 IFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLI 348
IFPII+ + +A YA ++ ++LK+IGDHLRA+ +L++DGV SN+GRGYV+RRLI
Sbjct: 247 IFPIIQAVAAIAQRDYASESESVKVSLKVIGDHLRAVTHLIADGVTASNLGRGYVLRRLI 306
Query: 349 RRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELR 408
RR VR GRL+GI + F IAE AI L +++ RE I EL REE R
Sbjct: 307 RRVVRHGRLIGI--------DRPFTAEIAETAIALMAAQYPNLREREAAIKAELTREEQR 358
Query: 409 FVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGV 468
F++TLERGEKLL ++LA A + R G+DAF+LYDT+GFP+E+T+E+AEE G+
Sbjct: 359 FLETLERGEKLLAELLAAATDQIR---------GEDAFVLYDTYGFPLELTQEIAEEKGL 409
Query: 469 SVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLSAKAIVESL 527
+VD+ GF+ M QR++SQAAH + L+V S D LAE+I +EF+GY A A V +L
Sbjct: 410 TVDLAGFEAAMAAQRQRSQAAHETIDLTVQGSLDRLAEQIHPSEFVGYGDAVATAKVTAL 469
Query: 528 LVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVKKS 587
L G+ V G V+++L+ TPFYAESGGQ+GD G L ++ +V ++DV+K
Sbjct: 470 LREGQSVEAAEAGDRVQIVLDHTPFYAESGGQVGDRGVL------TGESLIVRIEDVQKE 523
Query: 588 LGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQAG 647
G FVH G I G+L+VG V A +D R+RA+ +HTATHLLQAALK ++ + SQAG
Sbjct: 524 SG-FFVHYGQIERGLLQVGDSVTAQIDRACRRRAQANHTATHLLQAALKLIVDEGISQAG 582
Query: 648 SLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAMFG 707
SLVAFDRLRFDFN R + EL +IE IN WI +A+ +VM + AK GA+AMFG
Sbjct: 583 SLVAFDRLRFDFNCPRAVTPEELRQIEDQINQWIAEAHGTVVEVMPIATAKAKGAVAMFG 642
Query: 708 EKYGEQVKI 716
EKYG +V++
Sbjct: 643 EKYGAEVRV 651
>gi|427723644|ref|YP_007070921.1| alanyl-tRNA synthetase [Leptolyngbya sp. PCC 7376]
gi|427355364|gb|AFY38087.1| alanyl-tRNA synthetase [Leptolyngbya sp. PCC 7376]
Length = 877
Score = 733 bits (1893), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/669 (55%), Positives = 480/669 (71%), Gaps = 25/669 (3%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
SG IR +FL+F+ R H +LPSASLVPEDPTVLLTIAGML FKPIFLG+ PRA T
Sbjct: 9 SGSEIRSKFLNFFNERQHPILPSASLVPEDPTVLLTIAGMLPFKPIFLGQQEAPAPRATT 68
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
SQ+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFKK+AI WAWE ST + L + +
Sbjct: 69 SQKCIRTNDIENVGRTARHHTFFEMLGNFSFGDYFKKQAIAWAWELSTKVYKLDPKNIVV 128
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
SV+ +D+EA+ IW + GVP I RMG +DNFW SG TGPCGPCSE+YYDF P+ G +
Sbjct: 129 SVFREDNEAYAIWRDQEGVPESRIIRMGEEDNFWKSGPTGPCGPCSELYYDFKPELGDEN 188
Query: 229 VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDL 288
+DL DD RFIE+YNLVFMQYN+ +G+L PL ++NIDTG+GLER+A+ILQ+VPNNYETDL
Sbjct: 189 IDLEDDDRFIEYYNLVFMQYNRDAEGNLTPLAKQNIDTGMGLERMAQILQRVPNNYETDL 248
Query: 289 IFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLI 348
IFPII+ A+++A + Y S+D+T ++LK+IGDH+R++V ++SDG+ SN RGY++RRLI
Sbjct: 249 IFPIIETAAKIAGIDYKTSDDKTQVSLKVIGDHVRSVVQMISDGITASNTDRGYILRRLI 308
Query: 349 RRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELR 408
RR VR GRL+GI +G F+ ++E AI++ + + RE I +EL REE
Sbjct: 309 RRVVRHGRLIGI--------DGQFINQVSETAIQMLEAPYPETRQRETFIKQELDREEKS 360
Query: 409 FVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGV 468
F++TL RGEKLL +++A ++SG DAF L+DT+GFP+E+T+E+AEE G+
Sbjct: 361 FLKTLARGEKLLAEIIAKGDK---------QISGVDAFTLFDTYGFPMELTQEIAEEQGL 411
Query: 469 SVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLSAKAIVESL 527
+VD G+ EM Q+ +++AAH + L+V S D LAE I TEFLGY L ++ +E+L
Sbjct: 412 TVDEAGYKQEMTKQQERAKAAHKTIDLTVQGSIDALAEHIHPTEFLGYTDLKSQVKIEAL 471
Query: 528 LVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVKKS 587
LV G+ V G++V+++ N+TPFYAESGGQIGD G+ G N VV + DV+K
Sbjct: 472 LVAGERVDTAEVGAEVQLICNQTPFYAESGGQIGDRGYF---SGDN---LVVRINDVQKE 525
Query: 588 LGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQAG 647
G FVH G I G L G V A +D R+RA+ +HTATHLLQAALK ++ SQAG
Sbjct: 526 SG-FFVHYGKIERGTLNTGETVTATIDRACRRRAQANHTATHLLQAALKNIVDDSISQAG 584
Query: 648 SLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAMFG 707
SLV FDRLRFDFN R + ELE+IE IN WI +A+ Q + MA+ DAK GA+AMFG
Sbjct: 585 SLVDFDRLRFDFNCPRAITAEELEQIEDQINTWISEAHDTQVETMAIADAKAKGAVAMFG 644
Query: 708 EKYGEQVKI 716
EKYG +V++
Sbjct: 645 EKYGAEVRV 653
>gi|352095641|ref|ZP_08956655.1| alanyl-tRNA synthetase [Synechococcus sp. WH 8016]
gi|351678783|gb|EHA61928.1| alanyl-tRNA synthetase [Synechococcus sp. WH 8016]
Length = 893
Score = 730 bits (1884), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/669 (56%), Positives = 481/669 (71%), Gaps = 23/669 (3%)
Query: 47 PSSGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRA 106
P +G IR FL FY +RGHKV+ SASL+PEDPTVLLTIAGML FKP+FLG+ R PRA
Sbjct: 14 PRTGAEIRAAFLSFYEARGHKVMASASLIPEDPTVLLTIAGMLPFKPVFLGQQKRPAPRA 73
Query: 107 ATSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRL 166
+SQ+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFK++AI+WAWE ST FG+ L
Sbjct: 74 TSSQKCIRTNDIENVGRTARHHTFFEMLGNFSFGDYFKQQAIEWAWELSTDVFGIDPKHL 133
Query: 167 WISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGC 226
+SV+ +DDEA +IW VGV + I RM DNFW SG TGPCGPCSEIYYDF P+ G
Sbjct: 134 VVSVFREDDEAEQIWRDVVGVNPKRIIRMDEADNFWASGPTGPCGPCSEIYYDFKPELGD 193
Query: 227 SDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYET 286
+DL DD RFIEFYNLVFMQYN+ +G+L PL +NIDTGLGLER+A+ILQKVPNNYET
Sbjct: 194 EGIDLEDDDRFIEFYNLVFMQYNRDVEGTLTPLANRNIDTGLGLERMAQILQKVPNNYET 253
Query: 287 DLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRR 346
DLIFP+I+ A++LA V Y Q +D+ +LK+IGDH RAI L+ DGV SN+GRGY++RR
Sbjct: 254 DLIFPLIQAAADLAEVDYHQLDDKGKTSLKVIGDHSRAITQLICDGVTASNLGRGYILRR 313
Query: 347 LIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREE 406
L+RR VR GRLLGI FL ++ E +I L V R++ IL EL+REE
Sbjct: 314 LLRRVVRHGRLLGI--------HKPFLVTMGEASIALLQDAHPSVLERQEVILSELQREE 365
Query: 407 LRFVQTLERGEKLLDQMLADALSRTRESGSVPR-LSGQDAFLLYDTFGFPVEITKEVAEE 465
RF++TLERGEKL LAD L S P+ +SG AF LYDT+GFP+E+T+E+AEE
Sbjct: 366 SRFLETLERGEKL----LADVLE------SKPKQISGAQAFELYDTYGFPLELTQEIAEE 415
Query: 466 HGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLS-AKAI 523
G+ VD+ GF+ ME QR++++AA ++ L++ D+ D +A + T F GY+ L+ + +
Sbjct: 416 QGLDVDLAGFEQAMEQQRQRAKAAAVSIDLTLQDAIDQVAADLNATAFEGYELLTPSNSS 475
Query: 524 VESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKD 583
V++LLVNG+ S G V+V+L+RTPFY E GGQ+GD G L V G + +V +
Sbjct: 476 VQALLVNGEAATSASDGDAVQVVLDRTPFYGEGGGQVGDRGLL-VGDGADGNGLIVVIDG 534
Query: 584 VKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQET 643
V ++ G VFVH GT++ G LEVG V VD R+RA+ +HTATHLLQAALK+V+
Sbjct: 535 VSRNRG-VFVHSGTVQRGRLEVGDLVHGQVDRACRRRAQANHTATHLLQAALKQVVDPGI 593
Query: 644 SQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAI 703
QAGSLV F+RLRFDF+ R + ELE+IE LINGWI DA+ L+ MA+D+AK AGA+
Sbjct: 594 GQAGSLVDFERLRFDFHCSRAVKPGELEQIETLINGWICDAHGLEVNEMAIDEAKAAGAV 653
Query: 704 AMFGEKYGE 712
AMFGEKY +
Sbjct: 654 AMFGEKYAD 662
>gi|428220382|ref|YP_007104552.1| alanyl-tRNA synthetase [Synechococcus sp. PCC 7502]
gi|427993722|gb|AFY72417.1| alanyl-tRNA synthetase [Synechococcus sp. PCC 7502]
Length = 909
Score = 729 bits (1882), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/669 (53%), Positives = 480/669 (71%), Gaps = 22/669 (3%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
+G IR +FL FY RGHKVLPSASLVPEDPTVLLTIAGML FKPIFLG +VPRA T
Sbjct: 38 TGAEIRSKFLKFYEERGHKVLPSASLVPEDPTVLLTIAGMLPFKPIFLGLKEAEVPRATT 97
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
SQ+CIRTND+ENVG T RHHTFFEMLGNFSFGDYFKK+AI W WE T FG+P RL +
Sbjct: 98 SQKCIRTNDIENVGITKRHHTFFEMLGNFSFGDYFKKQAIAWGWELVTQVFGIPPERLIV 157
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
SV+ +D++AF IW ++G+P I+RMG +DNFW SG TGPCGPCSEIYYDF P+ G
Sbjct: 158 SVFHEDEDAFAIWRDDIGIPAHRIQRMG-EDNFWASGVTGPCGPCSEIYYDFKPELGDKH 216
Query: 229 VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDL 288
+DL DD RF+E YNLVFM+ N+ DGS PLK++NIDTGLGLER+A++LQ VPNNYETDL
Sbjct: 217 IDLEDDDRFLEVYNLVFMELNRNSDGSFTPLKKQNIDTGLGLERMAQVLQGVPNNYETDL 276
Query: 289 IFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLI 348
IFPI+K A+++A + Y QS+++T +LK+IGDH+R++V++++DG+ SN+GRGY++RRL+
Sbjct: 277 IFPILKTAADIAGIDYHQSDEKTKTSLKVIGDHVRSVVHMIADGITASNVGRGYILRRLL 336
Query: 349 RRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELR 408
RR VR GRL+GI G+ F +AE AI LS +V+ RE I EL +EE R
Sbjct: 337 RRVVRHGRLIGISGE--------FTTVVAEMAIALSEQAYPNVREREAIIKSELSKEENR 388
Query: 409 FVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGV 468
F+QTLERGEKLL ++L + E + G DAF LYDT+GFP+E+T+E+AEE G+
Sbjct: 389 FLQTLERGEKLLAEILT-----SPEIQDSKVIKGTDAFTLYDTYGFPLELTQEIAEEEGL 443
Query: 469 SVDMKGFDIEMENQRRQSQAAHNAVKLSVD-DSADLAEKIPDTEFLGYDTLSAKAIVESL 527
SVD +GF + M+ Q+ +S+ AH + L + +++A+++P TEF+GY A+ IV+ +
Sbjct: 444 SVDEEGFKVAMQEQQERSKDAHIDIDLLTQINWSEIAKQVPKTEFIGYTHTYAEGIVKLI 503
Query: 528 LVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVKKS 587
LVNG+ V G + ++L++TPFYAESGGQ+GD G+L ++ ++ + DV+K
Sbjct: 504 LVNGQVVDTAVAGDRIRIILDQTPFYAESGGQVGDKGYLSLSD------TIIRIDDVQKE 557
Query: 588 LGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQAG 647
+F+H G + G + + V A V R+R + HHT+THLLQAALKK++ +QAG
Sbjct: 558 -SDLFIHIGQVERGEITLNSVVNAQVAKSDRRRIQAHHTSTHLLQAALKKIVDPNIAQAG 616
Query: 648 SLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAMFG 707
SLV DRLRFDFN R + E+ EIE LIN WI +A+ + VM + +AK GA+AMFG
Sbjct: 617 SLVTSDRLRFDFNLSRAVTTAEIREIENLINTWILEAHPSEITVMPIAEAKAKGAVAMFG 676
Query: 708 EKYGEQVKI 716
EKYG +V++
Sbjct: 677 EKYGAEVRV 685
>gi|427738132|ref|YP_007057676.1| alanyl-tRNA synthetase [Rivularia sp. PCC 7116]
gi|427373173|gb|AFY57129.1| alanyl-tRNA synthetase [Rivularia sp. PCC 7116]
Length = 907
Score = 728 bits (1879), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/691 (54%), Positives = 491/691 (71%), Gaps = 38/691 (5%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
SG+ IR++FLDFYA R H+ LPSASLVPEDPTVLLTIAGML FKPIFLG+ + RA T
Sbjct: 8 SGNEIRQKFLDFYAQREHQQLPSASLVPEDPTVLLTIAGMLPFKPIFLGQRNPEFKRATT 67
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
SQ+C+RTND+ENVG T RHHTFFEMLGNFSFGDYFK++AI W WE ST F LP RL +
Sbjct: 68 SQKCVRTNDIENVGVTKRHHTFFEMLGNFSFGDYFKEQAINWGWEISTKVFNLPPERLAV 127
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
SVY +DD+A+ IW ++GVP I R+ +DNFW SGATGPCGPCSEI+YDFHP+ G +
Sbjct: 128 SVYHEDDQAYNIWRDKIGVPEARILRLD-EDNFWASGATGPCGPCSEIFYDFHPELGNEN 186
Query: 229 VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDL 288
+DL DD+RFIEFYNLVFMQYN+ DG+L PL +NIDTG+GLER+A+ILQ+VPNNYETDL
Sbjct: 187 IDLDDDSRFIEFYNLVFMQYNRDADGNLTPLANQNIDTGMGLERMAQILQQVPNNYETDL 246
Query: 289 IFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLI 348
IFPII+KA E+A + Y++S+++T +LK+IGDH+RA++++++D + SN+GRGYV+RRLI
Sbjct: 247 IFPIIEKAGEIAGIDYSKSDEKTKTSLKVIGDHVRAVMHMIADEIRASNVGRGYVLRRLI 306
Query: 349 RRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELR 408
RR VR GRL+GI EG F + E AI LS V+ RE I EL+REE +
Sbjct: 307 RRVVRHGRLIGI--------EGEFTTKVVETAISLSEGAYPRVRERENAIKAELQREESQ 358
Query: 409 FVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGV 468
F++TLERGEKLL++++A +E+ +V +SG DAF LYDT GFP+E+T+E+A E G
Sbjct: 359 FLKTLERGEKLLEEVIAKL---KQENKTV--ISGDDAFTLYDTHGFPLELTQEIASEAGF 413
Query: 469 SVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLSAKAIVESL 527
+VD+ GF+ M+ Q S+ AH + L+V D LAE I TEF+GY +A + VE++
Sbjct: 414 TVDVDGFNKRMQGQIEGSKGAHQTIDLTVQGELDKLAESIEVTEFVGYTESTATSKVEAI 473
Query: 528 LVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQG------TNQQTAVVE- 580
LV G G++V+++LN TPFYAESGGQIGD G++ T + A+ E
Sbjct: 474 LVEGISTEAAESGTEVQIVLNTTPFYAESGGQIGDRGYISGETTRVRRFPTLSEVALAER 533
Query: 581 ---------------VKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHH 625
++DVKK FVH G I G + VG V A +D R+RA+ +H
Sbjct: 534 LPPGRYPKGDGILIRIEDVKKE-SDFFVHFGRIERGTIRVGDSVTAQIDRACRRRAQANH 592
Query: 626 TATHLLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDAN 685
TATHLLQAALKK++ + SQAGSLV FDRLRFDFN R + E++++E +N WI +A+
Sbjct: 593 TATHLLQAALKKIVDEGISQAGSLVNFDRLRFDFNCPRAMTPEEVQQVEDQVNNWIAEAH 652
Query: 686 LLQTKVMALDDAKRAGAIAMFGEKYGEQVKI 716
+ +V+ L +AK GA+AMFGEKYGE+V++
Sbjct: 653 GAKIEVLPLAEAKARGAVAMFGEKYGEEVRV 683
>gi|88809533|ref|ZP_01125041.1| alanyl-tRNA synthetase [Synechococcus sp. WH 7805]
gi|88786752|gb|EAR17911.1| alanyl-tRNA synthetase [Synechococcus sp. WH 7805]
Length = 894
Score = 727 bits (1877), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/667 (55%), Positives = 475/667 (71%), Gaps = 20/667 (2%)
Query: 47 PSSGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRA 106
P +G IR+ FL F+ RGH+ +PSASLVPEDPTVLLTIAGML FKPIFLG+ R P A
Sbjct: 14 PRTGAEIREAFLSFFEQRGHRRMPSASLVPEDPTVLLTIAGMLPFKPIFLGQQERPAPCA 73
Query: 107 ATSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRL 166
TSQ+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFK++AI+WAWE ST FGL L
Sbjct: 74 TTSQKCIRTNDIENVGRTARHHTFFEMLGNFSFGDYFKQQAIEWAWELSTEVFGLDPKNL 133
Query: 167 WISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGC 226
+SV+ +DDEA +IW VGV + I RM +DNFW SG TGPCGPCSEIYYDF P+ G
Sbjct: 134 VVSVFREDDEAEQIWRDVVGVNPKRIIRMDEEDNFWASGPTGPCGPCSEIYYDFKPELGD 193
Query: 227 SDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYET 286
+DL DD RFIEFYNLVFMQ N+ G L PL +NIDTG+GLER+A+ILQKVPNNYET
Sbjct: 194 EGIDLEDDDRFIEFYNLVFMQSNRDAQGVLTPLANRNIDTGMGLERMAQILQKVPNNYET 253
Query: 287 DLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRR 346
DLIFP+I+ A++ A V Y Q +++ +LK+IGDH RA+ L+SDGV SN+GRGY++RR
Sbjct: 254 DLIFPLIQAAADRAGVDYYQLDEKGKTSLKVIGDHSRAVTQLISDGVTASNLGRGYILRR 313
Query: 347 LIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREE 406
L+RR VR GRLLGI + FL ++ E +I L + R + IL EL+REE
Sbjct: 314 LLRRVVRHGRLLGI--------DKPFLQAMGEASIALMQSAHPQLIERREVILAELQREE 365
Query: 407 LRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEH 466
RF++TLERGEKLL +LA ++SG+ AF LYDT+GFP+E+T+E+AEEH
Sbjct: 366 ARFLETLERGEKLLADVLA---------AKPKQISGEQAFELYDTYGFPLELTQEIAEEH 416
Query: 467 GVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLSAKAIVE 525
G++VD+ GF+ ME QR++++AA ++ L++ D+ D +A + DTEF GY+ L + ++
Sbjct: 417 GLAVDLAGFETAMEQQRQRAKAAAVSIDLTLQDAIDQVAAGLQDTEFRGYEQLEQSSSIQ 476
Query: 526 SLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVK 585
+L+VNG+P S G V+V+L+ TPFY E GGQIGD G L V G +V V+ V
Sbjct: 477 ALVVNGEPAQSASAGDAVQVVLDVTPFYGEGGGQIGDCGTL-VADGQAGDGLIVMVESVS 535
Query: 586 KSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQ 645
++ SVFVH G + G L VG V VD R+RA+ +HTATHLLQAALK+V+ Q
Sbjct: 536 RNR-SVFVHSGRVERGALSVGDVVHGRVDRACRRRAQANHTATHLLQAALKQVVDPGIGQ 594
Query: 646 AGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAM 705
AGSLV+FDRLRFDF+ R + EL IE LINGWI DA+ L+ + MA++ AK AGA+AM
Sbjct: 595 AGSLVSFDRLRFDFHCPRAVTTEELGRIESLINGWIADAHALEVQEMAIEQAKAAGAVAM 654
Query: 706 FGEKYGE 712
FGEKY +
Sbjct: 655 FGEKYAD 661
>gi|113953976|ref|YP_731956.1| alanyl-tRNA synthetase [Synechococcus sp. CC9311]
gi|122945499|sp|Q0I6G6.1|SYA_SYNS3 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|113881327|gb|ABI46285.1| alanyl-tRNA synthetase [Synechococcus sp. CC9311]
Length = 893
Score = 724 bits (1868), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/669 (56%), Positives = 477/669 (71%), Gaps = 23/669 (3%)
Query: 47 PSSGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRA 106
P SG IR FL FY RGHKV+ SASL+PEDPTVLLTIAGML FKP+FLG+ R PRA
Sbjct: 14 PRSGAEIRAAFLSFYEERGHKVMASASLIPEDPTVLLTIAGMLPFKPVFLGQQKRPAPRA 73
Query: 107 ATSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRL 166
+SQ+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFK++AI+WAWE ST FG+ L
Sbjct: 74 TSSQKCIRTNDIENVGRTARHHTFFEMLGNFSFGDYFKQQAIEWAWELSTDLFGIDPKHL 133
Query: 167 WISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGC 226
+SV+ +DDEA +IW VGV + I RM DNFW SG TGPCGPCSEIYYDF+P+ G
Sbjct: 134 VVSVFREDDEAEQIWRDVVGVNPKRIIRMDEADNFWASGPTGPCGPCSEIYYDFNPELGD 193
Query: 227 SDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYET 286
+DL DD RFIEFYNLVFMQYN+ +G+L PL +NIDTGLGLER+A+ILQKVPNNYET
Sbjct: 194 EGIDLEDDDRFIEFYNLVFMQYNRDAEGTLTPLANRNIDTGLGLERMAQILQKVPNNYET 253
Query: 287 DLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRR 346
DLIFP+I+ A++LA V Y Q +D +LK+IGDH RA+ L+ DGV SN+GRGY++RR
Sbjct: 254 DLIFPLIQAAADLAGVDYHQLDDAGQTSLKVIGDHSRAVTQLICDGVSASNLGRGYILRR 313
Query: 347 LIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREE 406
L+RR VR GRLLGI FL ++ + +I L V R++ IL EL+REE
Sbjct: 314 LLRRVVRHGRLLGI--------HQPFLVTMGQASIALLKDAYPSVIERQEVILAELQREE 365
Query: 407 LRFVQTLERGEKLLDQMLADALSRTRESGSVPR-LSGQDAFLLYDTFGFPVEITKEVAEE 465
RF++TLERGEKL LAD L S P+ +SG AF LYDT+GFP+E+T+E+AEE
Sbjct: 366 SRFLETLERGEKL----LADVLE------SKPKQISGAQAFELYDTYGFPLELTQEIAEE 415
Query: 466 HGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTL-SAKAI 523
HG+ VD+ GF+ ME QR++++AA ++ L++ D+ D +A + T F GYD L + +
Sbjct: 416 HGLDVDLAGFEQAMEQQRQRAKAAAVSIDLTLQDAIDQVAADLNATSFEGYDLLVQSSST 475
Query: 524 VESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKD 583
V++LLVNG+ S G V+V+L+ TPFY E GGQ+GD G L V G + +V ++
Sbjct: 476 VQALLVNGEAAASASDGDVVQVVLDNTPFYGEGGGQVGDRGLL-VGDGPDGNGLIVVIEG 534
Query: 584 VKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQET 643
V ++ G VFVH G ++ G L VG V VD R+RA+ +HTATHLLQAALK+V+ +
Sbjct: 535 VSRNRG-VFVHSGRVQLGRLGVGDVVHGQVDRACRRRAQANHTATHLLQAALKQVVDEGI 593
Query: 644 SQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAI 703
QAGSLV F+RLRFDF+ R + ELE+IE LINGWI DA L+ MA+D AK AGA+
Sbjct: 594 GQAGSLVNFERLRFDFHCPRAVKPEELEQIETLINGWISDAQSLEVNEMAIDQAKAAGAV 653
Query: 704 AMFGEKYGE 712
AMFGEKY +
Sbjct: 654 AMFGEKYAD 662
>gi|148240734|ref|YP_001226121.1| alanyl-tRNA synthetase [Synechococcus sp. WH 7803]
gi|205830237|sp|A5GPF9.1|SYA_SYNPW RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|147849273|emb|CAK24824.1| Alanyl-tRNA synthetase [Synechococcus sp. WH 7803]
Length = 891
Score = 721 bits (1862), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/667 (55%), Positives = 477/667 (71%), Gaps = 20/667 (2%)
Query: 47 PSSGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRA 106
P +G IR FL F+ RGHK +PSASLVPEDPTVLLTIAGML FKPIFLG+ R P A
Sbjct: 14 PRTGAEIRDAFLAFFEERGHKRMPSASLVPEDPTVLLTIAGMLPFKPIFLGQQERPAPCA 73
Query: 107 ATSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRL 166
+SQ+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFK++AI+WAWE ST FGL L
Sbjct: 74 TSSQKCIRTNDIENVGRTARHHTFFEMLGNFSFGDYFKQQAIEWAWELSTGVFGLDPKNL 133
Query: 167 WISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGC 226
+SV+ DDDEA +IW + VGV + I RM +DNFW SG TGPCGPCSEIYYDF P+ G
Sbjct: 134 VVSVFRDDDEAEQIWREVVGVNPKRIIRMDEEDNFWASGPTGPCGPCSEIYYDFKPELGD 193
Query: 227 SDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYET 286
+DL DD RFIEFYNLVFMQ N+ +G+L PL +NIDTG+GLER+A+ILQKVPNNYET
Sbjct: 194 DGIDLEDDDRFIEFYNLVFMQSNRDAEGTLTPLANRNIDTGMGLERMAQILQKVPNNYET 253
Query: 287 DLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRR 346
DLIFP+I+ A+E A V Y Q +++ +LK+IGDH RA+ L+SDGV SN+GRGY++RR
Sbjct: 254 DLIFPLIQAAAERAGVDYHQLDEKGKTSLKVIGDHSRAVTQLISDGVTASNLGRGYILRR 313
Query: 347 LIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREE 406
L+RR VR GRLLGI + FL ++ E +I L + R + IL EL+REE
Sbjct: 314 LLRRVVRHGRLLGI--------DKPFLQAMGEASIALMQSAHPQLSERREVILAELQREE 365
Query: 407 LRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEH 466
RF++TLERGEKLL +LA ++SG+ AF LYDT+GFP+E+T+E+AEEH
Sbjct: 366 ARFLETLERGEKLLADVLA---------AKPKQISGEQAFELYDTYGFPLELTQEIAEEH 416
Query: 467 GVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLSAKAIVE 525
G++VD+ GF+ ME QR++++AA ++ L++ D+ D +A + DTEF GY+ L + ++
Sbjct: 417 GLAVDLAGFETAMEQQRQRAKAAAVSIDLTLQDAIDQVAAGLQDTEFRGYEQLEQSSSIQ 476
Query: 526 SLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVK 585
+L+VNG+P G V+V+L+ TPFY E GGQIGD G L V G +V V+ V
Sbjct: 477 ALVVNGEPAQSAVAGDAVQVVLDVTPFYGEGGGQIGDRGTL-VADGQAGDGLIVMVESVS 535
Query: 586 KSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQ 645
++ SVFVH G ++ G L VG V VD R+RA+ +HTATHLLQAALK+ + Q
Sbjct: 536 RNR-SVFVHSGRVQRGALAVGDVVHGRVDRACRRRAQANHTATHLLQAALKQEVDPGIGQ 594
Query: 646 AGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAM 705
AGSLV+FDRLRFDF+ R + ELE IE LINGWI DA+ L+ + MA++ AK AGA+AM
Sbjct: 595 AGSLVSFDRLRFDFHCPRAVTAEELERIESLINGWIADAHALEVQEMAIEKAKAAGAVAM 654
Query: 706 FGEKYGE 712
FGEKY +
Sbjct: 655 FGEKYAD 661
>gi|260434774|ref|ZP_05788744.1| alanyl-tRNA synthetase [Synechococcus sp. WH 8109]
gi|260412648|gb|EEX05944.1| alanyl-tRNA synthetase [Synechococcus sp. WH 8109]
Length = 889
Score = 721 bits (1860), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/671 (54%), Positives = 479/671 (71%), Gaps = 25/671 (3%)
Query: 47 PSSGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRA 106
P SG+ IR+ FL+FYA RGHK + SASL+PEDPTVLLTIAGML FKP+FLG+ R PRA
Sbjct: 14 PRSGEEIREAFLNFYAERGHKRMASASLIPEDPTVLLTIAGMLPFKPVFLGQQERPAPRA 73
Query: 107 ATSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRL 166
+SQ+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFK++AI+WAWE ST +G+ L
Sbjct: 74 TSSQKCIRTNDIENVGRTARHHTFFEMLGNFSFGDYFKQQAIEWAWELSTGVYGIDPKNL 133
Query: 167 WISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGC 226
+SV+ +DDEA +IW VGV + I RM DNFW SG TGPCGPCSEIYYDF P+ G
Sbjct: 134 VVSVFREDDEAEQIWRDVVGVNPKRIIRMDEADNFWASGPTGPCGPCSEIYYDFKPELGN 193
Query: 227 SDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYET 286
+DL DD RFIEFYNLVFMQYN+ +G L PL +NIDTG+GLER+A+ILQKVPNNYET
Sbjct: 194 EGIDLEDDDRFIEFYNLVFMQYNRDAEGILTPLANRNIDTGMGLERMAQILQKVPNNYET 253
Query: 287 DLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRR 346
DLIFP+I+ A++LA V Y ND+ +LK+IGDH RA+ L+ DGV SN+GRGY++RR
Sbjct: 254 DLIFPLIQAAADLAGVDYHHLNDKGKTSLKVIGDHSRAVTQLICDGVTASNLGRGYILRR 313
Query: 347 LIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREE 406
L+RR VR GRLLGI + FL ++ E AI L V R++ IL EL+REE
Sbjct: 314 LLRRVVRHGRLLGI--------DKPFLVTMGEAAIALLKGAHPSVIERQEVILAELQREE 365
Query: 407 LRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEH 466
RF++TLERGEKLL ++LA + ++SG AF LYDT+GFP+E+T+E+AEE
Sbjct: 366 ARFLETLERGEKLLAEVLASKPT---------QISGAQAFELYDTYGFPLELTQEIAEEQ 416
Query: 467 GVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLSAKAIVE 525
G++VD+ GF+ ME QR++++AA ++ L++ D+ D + T F GY+ L + V+
Sbjct: 417 GLAVDLDGFEAAMEEQRQRAKAAAVSIDLTLQDAIDQVVADQAATCFDGYEALDHDSCVQ 476
Query: 526 SLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVK 585
+L+VNG+P G V+V+L+ TPFY E GGQ+GD G L G++ +V ++ V
Sbjct: 477 ALVVNGEPASTAKAGDAVQVVLDTTPFYGEGGGQVGDRGVL---SGSD---LIVRIESVS 530
Query: 586 KSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQ 645
+S VFVH G + G L +G V+A VD R+RA+ +HTATHLLQAALK+V+ Q
Sbjct: 531 RSR-DVFVHAGRVERGELALGDTVKAQVDRACRRRAQANHTATHLLQAALKQVVDPGIGQ 589
Query: 646 AGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAM 705
AGSLV FDRLRFDF+ + +L+++E LINGWI +A+ LQ + MA+D AK AGA+AM
Sbjct: 590 AGSLVDFDRLRFDFHCPTAVTADQLQQVETLINGWINEAHALQVQEMAIDQAKAAGAVAM 649
Query: 706 FGEKYGEQVKI 716
FGEKY + V++
Sbjct: 650 FGEKYADLVRV 660
>gi|159902592|ref|YP_001549936.1| alanyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211]
gi|205830180|sp|A9B9E5.1|SYA_PROM4 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|159887768|gb|ABX07982.1| Alanyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211]
Length = 890
Score = 718 bits (1853), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/682 (52%), Positives = 486/682 (71%), Gaps = 22/682 (3%)
Query: 36 TEEVEDKSQDFPSSGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIF 95
E++ S+ P +G+ IR FL F+A RGH+VLPSASLVP+DPTVLLTIAGML FKP+F
Sbjct: 3 VEQLSPHSKSHPLTGEEIRTAFLHFFAERGHQVLPSASLVPDDPTVLLTIAGMLPFKPVF 62
Query: 96 LGKVPRQVPRAATSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFS 155
LG R R TSQ+CIRTND+ENVGRT+RH T+FEMLGNFSFGDYFKKEAIQWAWE S
Sbjct: 63 LGHEERPSSRVVTSQKCIRTNDIENVGRTARHQTYFEMLGNFSFGDYFKKEAIQWAWELS 122
Query: 156 TVEFGLPANRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSE 215
T FGL L +S++ +DD+A+EIW +GV + I RM DNFW+SG TGPCGPCSE
Sbjct: 123 TKTFGLDPKYLVVSIFREDDDAYEIWRNIIGVNPDRIIRMDEADNFWSSGPTGPCGPCSE 182
Query: 216 IYYDFHPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
+YYDF+P+ G +DL DDTRFIEFYNLVFM++N+ G L L NIDTG+GLER+A+
Sbjct: 183 LYYDFNPELGNHCIDLEDDTRFIEFYNLVFMEFNRDSTGRLSSLSNCNIDTGMGLERMAQ 242
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
ILQKVPNNYETDLI+P+++K + L V Y +++ +T ++ K+IGDH+RA V L+SDGV
Sbjct: 243 ILQKVPNNYETDLIYPLLEKVAYLVGVDYQKTDKKTRISYKVIGDHIRACVQLISDGVSA 302
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN+GRGY++RRL+RR VR GRLLGI FL + E AI L + R
Sbjct: 303 SNLGRGYILRRLLRRIVRHGRLLGIP--------KPFLIDLGEVAISLMKSTYPQLLERR 354
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
IL+EL+REELRF++TLERGE+LL +L S + +SG+ AF LYDT+GFP
Sbjct: 355 DVILKELQREELRFLETLERGERLLADLL---------SNNPKEISGEQAFELYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLA-EKIPDTEFLG 514
+E+T+E+AEE+ + VD+K F+ M+ QR +++AA + L++ D+ D A ++ T F G
Sbjct: 406 LELTQEIAEENSIEVDLKAFEKAMQRQRIRAKAASTTIDLTLQDTLDKAVRELKPTNFKG 465
Query: 515 YDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQ 574
Y+ L+ + V+++ +NG+ + + ++V L+ TPFY ESGGQIGD G L+ TN
Sbjct: 466 YECLTETSTVQAIFINGELAQEAQENDVIQVALDITPFYGESGGQIGDTGILFKESVTN- 524
Query: 575 QTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAA 634
++E+ V ++ VFVH+G ++ G L+VG +++ V R+RA+++HTATHLLQA+
Sbjct: 525 --CLIEIDSVIRN-NDVFVHRGIVKNGRLQVGDIIQSQVHHINRRRAQINHTATHLLQAS 581
Query: 635 LKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMAL 694
LK+++G E SQAGSLV+F+RLRFDF+ P+ ELE++E+ IN WI +++ L K M +
Sbjct: 582 LKEIVGSEISQAGSLVSFERLRFDFHCSSPVSSEELEKVEKKINLWISESHSLVVKEMKI 641
Query: 695 DDAKRAGAIAMFGEKYGEQVKI 716
DDAK+AGA+AMFGEKYG V++
Sbjct: 642 DDAKQAGAVAMFGEKYGTLVRV 663
>gi|205830259|sp|A2CDK7.2|SYA_PROM3 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
Length = 892
Score = 717 bits (1852), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/667 (54%), Positives = 475/667 (71%), Gaps = 20/667 (2%)
Query: 47 PSSGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRA 106
P +G IR FL F+A R H+V+PSASLVPEDPTVLLTIAGML FKP+F+G+ R PRA
Sbjct: 14 PRTGSEIRTAFLTFFAERAHQVIPSASLVPEDPTVLLTIAGMLPFKPVFMGQAERPAPRA 73
Query: 107 ATSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRL 166
+SQ+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFK++AI+WAWE ST FGL L
Sbjct: 74 TSSQKCIRTNDIENVGRTARHHTFFEMLGNFSFGDYFKQQAIEWAWELSTEVFGLNPKNL 133
Query: 167 WISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGC 226
+SV+ +DDEA IW VGV + I RM DNFW SG TGPCGPCSEIYYDF PD G
Sbjct: 134 VVSVFREDDEAEAIWRDVVGVNPKRIIRMDEADNFWASGPTGPCGPCSEIYYDFKPDLGN 193
Query: 227 SDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYET 286
D+DL DD RF+EFYNLVFMQYN+ +G+L PL +NIDTG+GLER+A+ILQ VPNNYET
Sbjct: 194 DDIDLEDDGRFVEFYNLVFMQYNRDGEGNLTPLANRNIDTGMGLERMAQILQGVPNNYET 253
Query: 287 DLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRR 346
D+I+P+I+ A+ LA + Y + +D+ + K+IGDH RAI +L+ DGV SN+GRGY++RR
Sbjct: 254 DIIYPLIETAAGLAGLDYQKLDDKGKTSFKVIGDHCRAITHLICDGVTASNLGRGYIMRR 313
Query: 347 LIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREE 406
L+RR VR GRL+GI E FL ++ E AI L ++ R + IL EL REE
Sbjct: 314 LLRRVVRHGRLVGI--------EKPFLQAMGEAAIALMVEAYPQLEERRKLILAELNREE 365
Query: 407 LRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEH 466
RF++TLERGEK+ LAD L + +SG AF LYDT+GFP+E+T+E+AEEH
Sbjct: 366 ARFLETLERGEKV----LADVLVANPQ-----MISGGQAFELYDTYGFPLELTQEIAEEH 416
Query: 467 GVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLSAKAIVE 525
G++VD++GF+ M+ QR++++AA ++ L++ + + +A ++ T F GY L V
Sbjct: 417 GLTVDLQGFEQAMDQQRQRAKAAAVSIDLTLQGAIEQMAAELEATRFKGYQVLEQPCCVL 476
Query: 526 SLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVK 585
+L+VNG+ + S G +V+++L+ TPFY ESGGQ+GD+G L +G+ +V V DV
Sbjct: 477 ALVVNGESAERASAGDNVQIVLDTTPFYGESGGQVGDHGVLS-GEGSGGNGVIVAVDDVS 535
Query: 586 KSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQ 645
+ +VFVH G I G L +G V A VD R+RA+ +HTATHLLQAALK+V+ Q
Sbjct: 536 RHR-NVFVHFGRIERGTLALGDLVNAQVDRACRRRAQANHTATHLLQAALKQVVDSGIGQ 594
Query: 646 AGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAM 705
AGSLV FDRLRFDF+ R + ELE+IE LINGWI +++ L + M++ +AK AGA+AM
Sbjct: 595 AGSLVDFDRLRFDFHCSRAVTAKELEQIEALINGWIMESHDLIVEEMSIQEAKAAGAVAM 654
Query: 706 FGEKYGE 712
FGEKY +
Sbjct: 655 FGEKYAD 661
>gi|255072777|ref|XP_002500063.1| predicted protein [Micromonas sp. RCC299]
gi|226515325|gb|ACO61321.1| predicted protein [Micromonas sp. RCC299]
Length = 923
Score = 717 bits (1852), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/697 (54%), Positives = 496/697 (71%), Gaps = 25/697 (3%)
Query: 24 SARSTSASVQPLTEEVEDKS-QDFPSSGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVL 82
+A S++ + P T +++D + +D SG IR+RFL+FY RGH LPS+SLVPEDPTVL
Sbjct: 4 AASSSTETAAPKTADLKDAAGKDI--SGSGIRRRFLEFYEQRGHARLPSSSLVPEDPTVL 61
Query: 83 LTIAGMLQFKPIFLGKVPRQVPRAATSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDY 142
LTIAGMLQFKP+F+G+ R VP A T+Q+C+RTND+ENVG T+RHHTFFEMLGNFSFGDY
Sbjct: 62 LTIAGMLQFKPVFMGQAERAVPCATTTQKCVRTNDIENVGVTARHHTFFEMLGNFSFGDY 121
Query: 143 FKKEAIQWAWEFSTVEFGLPANRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFW 202
FKKEAIQ+AWE +T E+GL R+++SV+ +DDEA+ IW VGVP E IKRM DNFW
Sbjct: 122 FKKEAIQYAWELATKEYGLDETRIYVSVFREDDEAYAIWRDVVGVPEERIKRMDEADNFW 181
Query: 203 NSGATGPCGPCSEIYYDFHPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQK 262
+G TGPCGPCSE+Y+DFHP+RG DL DD+RFIEFYNLVFM+ N+ G PLK K
Sbjct: 182 AAGPTGPCGPCSELYWDFHPERGAEGADLEDDSRFIEFYNLVFMEMNRDASGKTAPLKNK 241
Query: 263 NIDTGLGLERIARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHL 322
NIDTG+GLER+A+ILQ PNNYETDLI PII KA+ +A +SY ++D T L LK+IGDH
Sbjct: 242 NIDTGMGLERMAQILQGKPNNYETDLIRPIIDKAASMAGISYDDADDATKLKLKVIGDHT 301
Query: 323 RAIVYLLSDGVFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEG--AFLPSIAEKA 380
RA+ YL+SDGV PSN+GRGY+VRRL+RR VR GRLLG+K EG AF P+IAE A
Sbjct: 302 RAVAYLVSDGVLPSNVGRGYIVRRLLRRVVRCGRLLGVKAP-----EGAQAFTPTIAEVA 356
Query: 381 IELSTHIDSDVKAREQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRL 440
+ +S D +V R +I EE +REELRF +TL RGE++L M+A A ++ P L
Sbjct: 357 VGMSGDCDPEVANRAPKIYEEFEREELRFAKTLGRGEEILADMIAAAKAKDA---EAPEL 413
Query: 441 SGQDAFLLYDTFGFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDD- 499
SG DAF LYDT+GFP++IT +VA E GV+VD++GF+ ME R S+ A V ++ D
Sbjct: 414 SGDDAFTLYDTYGFPLDITTDVATEEGVAVDVEGFEAAMEIARTLSRDARVTVDVTAGDL 473
Query: 500 SADLAEKIPD-TEFLGYDTLSAKAI-VESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESG 557
A +A+++ + T F GY +L +++ V +++ G+ V + G VEV+L+ TPFYAE G
Sbjct: 474 LATIADELGEPTRFTGYGSLVEQSVTVRAIVRAGERVDSAAAGETVEVVLDATPFYAEGG 533
Query: 558 GQIGDYGFLYVTQGTNQQTAVVEVKDVKKSLGS-VFVHKGTIR---EGVLEVGREVEAIV 613
GQ+GD G + + G V+ V+D +K+ G VFVH + G + VG V A V
Sbjct: 534 GQVGDEGEIQLANGV-----VLSVRDCRKAAGGRVFVHVCEVTGDASGSVSVGDAVTAAV 588
Query: 614 DPKLRQRAKVHHTATHLLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEI 673
D + R+RAK +HTATHLLQ+ALK+V+G++ SQAGSLV +RLRFDFN +LEEI
Sbjct: 589 DAESRRRAKANHTATHLLQSALKRVVGEDVSQAGSLVNTERLRFDFNAPAGPTPAQLEEI 648
Query: 674 ERLINGWIGDANLLQTKVMALDDAKRAGAIAMFGEKY 710
E L+NGWIGDA L + M + +AK GA AMFGEKY
Sbjct: 649 EALVNGWIGDATNLVAQEMPIAEAKSRGATAMFGEKY 685
>gi|124024525|ref|YP_001018832.1| alanyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9303]
gi|123964811|gb|ABM79567.1| Alanyl-tRNA synthetase:DHHA1 domain [Prochlorococcus marinus str.
MIT 9303]
Length = 930
Score = 716 bits (1849), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/667 (54%), Positives = 475/667 (71%), Gaps = 20/667 (2%)
Query: 47 PSSGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRA 106
P +G IR FL F+A R H+V+PSASLVPEDPTVLLTIAGML FKP+F+G+ R PRA
Sbjct: 52 PRTGSEIRTAFLTFFAERAHQVIPSASLVPEDPTVLLTIAGMLPFKPVFMGQAERPAPRA 111
Query: 107 ATSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRL 166
+SQ+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFK++AI+WAWE ST FGL L
Sbjct: 112 TSSQKCIRTNDIENVGRTARHHTFFEMLGNFSFGDYFKQQAIEWAWELSTEVFGLNPKNL 171
Query: 167 WISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGC 226
+SV+ +DDEA IW VGV + I RM DNFW SG TGPCGPCSEIYYDF PD G
Sbjct: 172 VVSVFREDDEAEAIWRDVVGVNPKRIIRMDEADNFWASGPTGPCGPCSEIYYDFKPDLGN 231
Query: 227 SDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYET 286
D+DL DD RF+EFYNLVFMQYN+ +G+L PL +NIDTG+GLER+A+ILQ VPNNYET
Sbjct: 232 DDIDLEDDGRFVEFYNLVFMQYNRDGEGNLTPLANRNIDTGMGLERMAQILQGVPNNYET 291
Query: 287 DLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRR 346
D+I+P+I+ A+ LA + Y + +D+ + K+IGDH RAI +L+ DGV SN+GRGY++RR
Sbjct: 292 DIIYPLIETAAGLAGLDYQKLDDKGKTSFKVIGDHCRAITHLICDGVTASNLGRGYIMRR 351
Query: 347 LIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREE 406
L+RR VR GRL+GI E FL ++ E AI L ++ R + IL EL REE
Sbjct: 352 LLRRVVRHGRLVGI--------EKPFLQAMGEAAIALMVEAYPQLEERRKLILAELNREE 403
Query: 407 LRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEH 466
RF++TLERGEK+ LAD L + +SG AF LYDT+GFP+E+T+E+AEEH
Sbjct: 404 ARFLETLERGEKV----LADVLVANPQ-----MISGGQAFELYDTYGFPLELTQEIAEEH 454
Query: 467 GVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLSAKAIVE 525
G++VD++GF+ M+ QR++++AA ++ L++ + + +A ++ T F GY L V
Sbjct: 455 GLTVDLQGFEQAMDQQRQRAKAAAVSIDLTLQGAIEQMAAELEATRFKGYQVLEQPCCVL 514
Query: 526 SLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVK 585
+L+VNG+ + S G +V+++L+ TPFY ESGGQ+GD+G L +G+ +V V DV
Sbjct: 515 ALVVNGESAERASAGDNVQIVLDTTPFYGESGGQVGDHGVLS-GEGSGGNGVIVAVDDVS 573
Query: 586 KSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQ 645
+ +VFVH G I G L +G V A VD R+RA+ +HTATHLLQAALK+V+ Q
Sbjct: 574 RHR-NVFVHFGRIERGTLALGDLVNAQVDRACRRRAQANHTATHLLQAALKQVVDSGIGQ 632
Query: 646 AGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAM 705
AGSLV FDRLRFDF+ R + ELE+IE LINGWI +++ L + M++ +AK AGA+AM
Sbjct: 633 AGSLVDFDRLRFDFHCSRAVTAKELEQIEALINGWIMESHDLIVEEMSIQEAKAAGAVAM 692
Query: 706 FGEKYGE 712
FGEKY +
Sbjct: 693 FGEKYAD 699
>gi|33864421|ref|NP_895981.1| alanyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9313]
gi|41018180|sp|Q7V419.1|SYA_PROMM RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|33641201|emb|CAE22331.1| Alanyl-tRNA synthetase:DHHA1 domain [Prochlorococcus marinus str.
MIT 9313]
Length = 892
Score = 716 bits (1847), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/667 (53%), Positives = 475/667 (71%), Gaps = 20/667 (2%)
Query: 47 PSSGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRA 106
P +G IR FL F+A R H+V+PSASLVPEDPTVLLTIAGML FKP+F+G+ R PRA
Sbjct: 14 PRTGSEIRTAFLTFFAERAHQVIPSASLVPEDPTVLLTIAGMLPFKPVFMGQAERPAPRA 73
Query: 107 ATSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRL 166
+SQ+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFK++AI+WAWE +T FGL L
Sbjct: 74 TSSQKCIRTNDIENVGRTARHHTFFEMLGNFSFGDYFKQQAIEWAWELTTEVFGLDPKNL 133
Query: 167 WISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGC 226
+SV+ +DDEA IW VGV + I RM DNFW SG TGPCGPCSEIYYDF PD G
Sbjct: 134 VVSVFREDDEAETIWRDVVGVNPKRIMRMDEADNFWASGPTGPCGPCSEIYYDFKPDLGN 193
Query: 227 SDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYET 286
D+DL DD RF+EFYNLVFMQYN+ +G+L PL +NIDTG+GLER+A+ILQ VPNNYET
Sbjct: 194 DDIDLEDDGRFVEFYNLVFMQYNRDGEGNLTPLANRNIDTGMGLERMAQILQGVPNNYET 253
Query: 287 DLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRR 346
D+I+P+I+ A+ LA + Y + +++ + K+IGDH RAI +L+ DGV SN+GRGY++RR
Sbjct: 254 DIIYPLIETAAGLAGLDYQKLDEKGKTSFKVIGDHCRAITHLICDGVTASNLGRGYIMRR 313
Query: 347 LIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREE 406
L+RR VR GRL+GI E FL ++ E AI L ++ R + IL EL REE
Sbjct: 314 LLRRVVRHGRLVGI--------EKPFLQAMGEAAIALMVEAYPQLEERRKLILAELNREE 365
Query: 407 LRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEH 466
RF++TLERGEK+ LAD L + +SG AF LYDT+GFP+E+T+E+AEEH
Sbjct: 366 ARFLETLERGEKV----LADVLVANPQ-----MISGGQAFELYDTYGFPLELTQEIAEEH 416
Query: 467 GVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLSAKAIVE 525
G++VD++GF+ M+ QR++++AA ++ L++ + + +A ++ T F GY+ L V
Sbjct: 417 GLTVDLQGFEQAMDQQRQRAKAAAVSIDLTLQGAIEQMAAELEATRFQGYEVLEQPCCVL 476
Query: 526 SLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVK 585
+L+VNG+ + S G V+++L+ TPFY ESGGQ+GD+G L +G+ +V V DV
Sbjct: 477 ALVVNGESAERASAGDSVQIVLDTTPFYGESGGQVGDHGVLS-GEGSGGNGVIVTVDDVS 535
Query: 586 KSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQ 645
+ +VFVH G I G L +G V A VD R+RA+ +HTATHLLQAALK+V+ Q
Sbjct: 536 RHR-NVFVHFGRIERGTLALGDLVNAQVDRACRRRAQANHTATHLLQAALKQVVDSGIGQ 594
Query: 646 AGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAM 705
AGSLV FDRLRFDF+ R + ELE+IE LINGWI +++ L + M++ +AK AGA+AM
Sbjct: 595 AGSLVDFDRLRFDFHCARAVTAKELEQIEALINGWIMESHDLIVEEMSIQEAKAAGAVAM 654
Query: 706 FGEKYGE 712
FGEKY +
Sbjct: 655 FGEKYAD 661
>gi|33866890|ref|NP_898449.1| alanyl-tRNA synthetase [Synechococcus sp. WH 8102]
gi|41018174|sp|Q7U3R9.1|SYA_SYNPX RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|33639491|emb|CAE08875.1| Alanyl-tRNA synthetase [Synechococcus sp. WH 8102]
Length = 889
Score = 714 bits (1843), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/667 (55%), Positives = 479/667 (71%), Gaps = 25/667 (3%)
Query: 47 PSSGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRA 106
P SG+ IR+ FL+FYA RGH+ + SASL+PEDPTVLLTIAGML FKP+FLG+ R PRA
Sbjct: 14 PRSGEDIREAFLNFYAERGHQRMASASLIPEDPTVLLTIAGMLPFKPVFLGQQQRPAPRA 73
Query: 107 ATSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRL 166
+SQ+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFK++AI+WAWE ST +G+ L
Sbjct: 74 TSSQKCIRTNDIENVGRTARHHTFFEMLGNFSFGDYFKQQAIEWAWELSTQVYGIDPRNL 133
Query: 167 WISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGC 226
+SV+ +DDEA +IW VGV + I RM DNFW SG TGPCGPCSEIYYDF P+ G
Sbjct: 134 VVSVFREDDEAEQIWRDVVGVNTKRIIRMDEADNFWASGPTGPCGPCSEIYYDFKPELGD 193
Query: 227 SDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYET 286
+DL DD RFIEFYNLVFMQYN+ +G+L PL +NIDTG+GLER+A+ILQKVPNNYET
Sbjct: 194 DGIDLEDDDRFIEFYNLVFMQYNRDAEGNLTPLANRNIDTGMGLERMAQILQKVPNNYET 253
Query: 287 DLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRR 346
DLIFP+I+ A++LA V YAQ +D+ +LK+IGDH RA+ L+ DGV SN+GRGY++RR
Sbjct: 254 DLIFPLIQAAADLACVDYAQLDDKGKTSLKVIGDHSRAVTQLICDGVTASNLGRGYILRR 313
Query: 347 LIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREE 406
L+RR VR GRLLGI + FL ++ E AI+L V R++ IL EL+REE
Sbjct: 314 LLRRVVRHGRLLGI--------DKPFLVTMGEAAIDLLKGAHPGVIERQEVILAELQREE 365
Query: 407 LRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEH 466
RF++TLERGEKLL ++LA SR + +SG AF LYDT+GFP+E+T+E+AEE
Sbjct: 366 ARFLETLERGEKLLAEVLA---SRPTQ------ISGAQAFELYDTYGFPLELTQEIAEEQ 416
Query: 467 GVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLSAKAIVE 525
++VD+ GF++ ME QR++++AA ++ L++ D+ + +A P T F GYD L + V+
Sbjct: 417 RITVDLDGFEVAMEEQRQRAKAAAVSIDLTLQDAIEQVAGDQPATAFKGYDALDHPSTVQ 476
Query: 526 SLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVK 585
+L+VNG P S G V+V+L+ TPFY E GGQ+GD G L G + +V + V
Sbjct: 477 ALVVNGAPASTASAGDVVQVVLDSTPFYGEGGGQVGDRGSL---SGVD---VIVAIDSVS 530
Query: 586 KSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQ 645
+S VFVH G + G L VG V A VD R+RA+ +HTATHLLQAALK+V+ Q
Sbjct: 531 RSR-DVFVHSGRMERGHLAVGDTVNAQVDRSCRRRAQANHTATHLLQAALKQVVDPGIGQ 589
Query: 646 AGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAM 705
AGSLV FDRLRFDF+ + +L +IE LINGWI +A+ L+ + MA+D AK AGA+AM
Sbjct: 590 AGSLVDFDRLRFDFHCPTAVTAEQLAQIETLINGWIAEAHCLEVQEMAIDQAKAAGAVAM 649
Query: 706 FGEKYGE 712
FGEKY +
Sbjct: 650 FGEKYAD 656
>gi|116071953|ref|ZP_01469221.1| alanyl-tRNA synthetase [Synechococcus sp. BL107]
gi|116065576|gb|EAU71334.1| alanyl-tRNA synthetase [Synechococcus sp. BL107]
Length = 887
Score = 712 bits (1837), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/669 (54%), Positives = 465/669 (69%), Gaps = 27/669 (4%)
Query: 46 FPSSGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPR 105
P +G IR FL FY RGHKV+ SASL+PEDPTVLLTIAGML FKP+FLG+ R PR
Sbjct: 13 LPRTGAEIRAAFLCFYQERGHKVMASASLIPEDPTVLLTIAGMLPFKPVFLGQQQRPAPR 72
Query: 106 AATSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANR 165
A +SQ+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFK++AI+WAW+ ST FG+
Sbjct: 73 ATSSQKCIRTNDIENVGRTARHHTFFEMLGNFSFGDYFKQQAIEWAWQLSTEVFGIDPKH 132
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRG 225
L +SV+ +DDEA +IW VGV + I RM DNFW SG TGPCGPCSEIYYDF P+ G
Sbjct: 133 LVVSVFREDDEAEQIWRDVVGVNPKRIIRMDEADNFWASGPTGPCGPCSEIYYDFKPELG 192
Query: 226 CSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYE 285
+DL DD RFIEFYNLVFMQYN+ +GSL PL +NIDTGLGLER+A+ILQKVPNNYE
Sbjct: 193 DEGIDLEDDDRFIEFYNLVFMQYNRDAEGSLTPLANRNIDTGLGLERMAQILQKVPNNYE 252
Query: 286 TDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVR 345
TDLIFP+I+ A++ A V Y Q +D +LK+IGDH RA+ L+ DGV SN+GRGY++R
Sbjct: 253 TDLIFPLIQAAADCAGVDYHQLDDAGKTSLKVIGDHSRAVTQLICDGVTASNLGRGYILR 312
Query: 346 RLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKRE 405
RL+RR VR GRL+GI FL + E +I L V R++ IL EL+RE
Sbjct: 313 RLLRRVVRHGRLIGIN--------RPFLVMMGEASIALLKDAHPSVLERQEVILAELQRE 364
Query: 406 ELRFVQTLERGEKLLDQMLADALSRTRESGSVPR-LSGQDAFLLYDTFGFPVEITKEVAE 464
E RF++TLERGEKLL ++L S P+ +SG AF LYDT+GFP+E+T+E+AE
Sbjct: 365 ESRFLETLERGEKLLSEVL----------DSKPKQISGAQAFELYDTYGFPLELTQEIAE 414
Query: 465 EHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPD-TEFLGYDTLSAKAI 523
E G+ VD+ GF+ ME QR++++AA ++ L++ D+ D + T F GY L +
Sbjct: 415 EQGLEVDLAGFEEAMEQQRQRAKAAAVSIDLTLQDAIDQVVATQNATAFQGYQVLEQPSC 474
Query: 524 VESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKD 583
V++L+ NG+P S G V+++L TPFY E GGQ+GD G L + +V ++
Sbjct: 475 VQALVANGEPATSASAGDHVQIVLESTPFYGEGGGQVGDRGVL------SGADVIVAIES 528
Query: 584 VKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQET 643
V +S VFVH G I G L VG + A VD R+RA+ +HTATHLLQAALK+V+
Sbjct: 529 VSRSR-DVFVHAGRIERGQLTVGDAITAQVDRACRRRAQANHTATHLLQAALKQVVDPGI 587
Query: 644 SQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAI 703
QAGSLV FDRLRFDF+ + + +LE+IE LINGWI +A+ L + MA+D AK AGA+
Sbjct: 588 GQAGSLVDFDRLRFDFHAPQAVTTEQLEQIETLINGWIAEAHGLLVEEMAIDQAKAAGAV 647
Query: 704 AMFGEKYGE 712
AMFGEKY +
Sbjct: 648 AMFGEKYAD 656
>gi|427703937|ref|YP_007047159.1| alanine--tRNA ligase [Cyanobium gracile PCC 6307]
gi|427347105|gb|AFY29818.1| alanine--tRNA ligase [Cyanobium gracile PCC 6307]
Length = 893
Score = 711 bits (1836), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/675 (55%), Positives = 479/675 (70%), Gaps = 21/675 (3%)
Query: 41 DKSQDFPSSGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVP 100
D ++ P SG IR+ FL FY RGH+ + SASLVP+DPTVLLTIAGML FKP+FLG+ P
Sbjct: 4 DSTRPRPRSGAEIREAFLAFYEQRGHRRMASASLVPDDPTVLLTIAGMLPFKPVFLGQAP 63
Query: 101 RQVPRAATSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFG 160
PRA +SQ+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFK+EAI WAWE +T FG
Sbjct: 64 PPGPRATSSQKCIRTNDIENVGRTARHHTFFEMLGNFSFGDYFKEEAIAWAWELTTEVFG 123
Query: 161 LPANRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDF 220
L L +SV+ +DDEA IW VGV + I RM DNFW SG TGPCGPCSEIYYDF
Sbjct: 124 LDPAHLVVSVFREDDEAAAIWRDAVGVDPKRIIRMDEADNFWASGPTGPCGPCSEIYYDF 183
Query: 221 HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKV 280
HP+RG +DL DD RFIEFYNLVFMQYN+ G+L PL +++IDTG+GLER+A+ILQ+V
Sbjct: 184 HPERGDDGIDLEDDGRFIEFYNLVFMQYNRDAAGTLTPLARRSIDTGMGLERMAQILQQV 243
Query: 281 PNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGR 340
PNNYETDLI+P+++ A+ LA + Y + R +LK+IGDH RAI L++DGV SN+GR
Sbjct: 244 PNNYETDLIYPLLEAAAALAGLDYRALDARAQTSLKVIGDHSRAITQLIADGVTASNLGR 303
Query: 341 GYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILE 400
GYV+RRL+RR VR GRLLGI + FL ++ E AIEL + R + IL
Sbjct: 304 GYVLRRLLRRVVRHGRLLGI--------DRPFLAAMGEAAIELMAPAHPRLPERREVILA 355
Query: 401 ELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITK 460
EL+REE RF+ TLERGEKLL ++LA R+SG AF LYDT+GFP+E+T
Sbjct: 356 ELEREEARFLDTLERGEKLLAEVLA---------ARPERISGDAAFELYDTYGFPLELTA 406
Query: 461 EVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLS 519
E+AEEHG++VD+ GF+ ME QR++++AA ++ L++ + + +A + T+F GY+ L
Sbjct: 407 EIAEEHGLTVDLDGFEAAMERQRQRAKAAAVSIDLTLQGAIEQVAGALAPTDFRGYEALD 466
Query: 520 AKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTA-- 577
A V +L+VNG+P + G V+++L+ TPFY ESGGQ+GD G L + A
Sbjct: 467 QAACVLALVVNGEPATAAAAGDAVQIVLDSTPFYGESGGQVGDRGVLLAGEAAAGVGAGL 526
Query: 578 VVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKK 637
+V ++ V ++ SVFVH G I G L VG V+A VD R+RA+ HHTATHLLQAALK+
Sbjct: 527 IVAIEAVSRNR-SVFVHSGRIERGRLTVGDVVQARVDRSCRRRAQAHHTATHLLQAALKQ 585
Query: 638 VIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDA 697
V+ SQAGSLV FDRLRFDF+ R L ELE+IE L+NGWI +A+ L+ MAL+ A
Sbjct: 586 VVDDGVSQAGSLVDFDRLRFDFHCPRALTPDELEQIEDLVNGWIAEAHPLEVAEMALERA 645
Query: 698 KRAGAIAMFGEKYGE 712
+ AGA+AMFGEKYGE
Sbjct: 646 RAAGAVAMFGEKYGE 660
>gi|33239500|ref|NP_874442.1| alanyl-tRNA synthetase [Prochlorococcus marinus subsp. marinus str.
CCMP1375]
gi|81665176|sp|Q7VEG5.1|SYA_PROMA RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|33237025|gb|AAP99094.1| Alanyl-tRNA synthetase [Prochlorococcus marinus subsp. marinus str.
CCMP1375]
Length = 892
Score = 711 bits (1834), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/683 (53%), Positives = 480/683 (70%), Gaps = 24/683 (3%)
Query: 31 SVQPLTEEVEDKSQDFPSSGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQ 90
+V+ L+ E KS +G+ IR FL+FYA RGH+++PSASLVP DPTVLLTIAGML
Sbjct: 2 AVERLSSNSEMKSL----TGEEIRAAFLNFYAERGHEIVPSASLVPNDPTVLLTIAGMLP 57
Query: 91 FKPIFLGKVPRQVPRAATSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQW 150
FKP+FLG R R + Q+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFKKEAIQW
Sbjct: 58 FKPVFLGHQDRPSARVTSCQKCIRTNDIENVGRTARHHTFFEMLGNFSFGDYFKKEAIQW 117
Query: 151 AWEFSTVEFGLPANRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPC 210
AWE S FGL + + IS++ +DDEA +IW +GV I RM DNFW+SG TGPC
Sbjct: 118 AWELSINVFGLNPSHIVISIFREDDEAEQIWRDVIGVNPRRIIRMDEKDNFWSSGPTGPC 177
Query: 211 GPCSEIYYDFHPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGL 270
GPCSE+YYDFHP+ G ++DL DDTRFIEFYNLVFMQYN+ G+L L NIDTG+GL
Sbjct: 178 GPCSELYYDFHPELGEEEIDLEDDTRFIEFYNLVFMQYNRNSSGTLTSLANCNIDTGMGL 237
Query: 271 ERIARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLS 330
ER+A+ILQ V NNYETDLI+P+++K + L +V Y N + K+IGDH RA V+L+
Sbjct: 238 ERMAQILQGVANNYETDLIYPLLEKIASLIDVQYEDLNATIKASFKVIGDHTRACVHLIG 297
Query: 331 DGVFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSD 390
DGV SN+GRGYV+RRL+RR VR GRL+GI FL IAE AIEL
Sbjct: 298 DGVSASNLGRGYVLRRLLRRVVRHGRLIGIT--------KPFLVQIAEVAIELMQSAYPQ 349
Query: 391 VKAREQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYD 450
+ R Q I +EL+REE RF++TLE+GEKLL ++L+ A S ++G+ AF LYD
Sbjct: 350 LLERRQLIFKELQREETRFLETLEKGEKLLAELLSKAPS---------VITGEAAFELYD 400
Query: 451 TFGFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPD 509
T+GFPVE+T+E+AEE+ + VDMKGF M+ QRR++++A + L++ D+ D + ++ +
Sbjct: 401 TYGFPVELTEEIAEENDLRVDMKGFKKAMDEQRRRAKSAAMTIDLTLQDTIDKVVSEVGE 460
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
T FLGY L + V++++VNG + + G ++++LN TPFY E GGQIGD G +
Sbjct: 461 TNFLGYQQLEQFSQVQAIVVNGVSSQECNVGDKIDIVLNMTPFYGEGGGQIGDRGIISSA 520
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+ + ++E+ V++ G+ FVH G ++ GVL +G V+ VD R+ A+ +HTATH
Sbjct: 521 SSDDSE-CLIEIDSVRRVKGA-FVHSGLVKNGVLTLGDNVQCTVDSFSRRCAQANHTATH 578
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
LLQAALKK + + +QAGSLV FDRLRFDF+F RP+ ELE IE+LINGWI +A+ L
Sbjct: 579 LLQAALKKAVDSDITQAGSLVDFDRLRFDFHFVRPVSGAELEHIEKLINGWISEAHSLVI 638
Query: 690 KVMALDDAKRAGAIAMFGEKYGE 712
M++++AKR GAIAMFGEKYGE
Sbjct: 639 SEMSINEAKRVGAIAMFGEKYGE 661
>gi|78185740|ref|YP_378174.1| alanyl-tRNA synthetase [Synechococcus sp. CC9902]
gi|78170034|gb|ABB27131.1| alanyl-tRNA synthetase [Synechococcus sp. CC9902]
Length = 899
Score = 709 bits (1830), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/668 (54%), Positives = 464/668 (69%), Gaps = 27/668 (4%)
Query: 47 PSSGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRA 106
P +G IR FL FY RGHKV+ SASL+PEDPTVLLTIAGML FKP+FLG+ R PRA
Sbjct: 23 PQTGAEIRSAFLRFYEERGHKVMASASLIPEDPTVLLTIAGMLPFKPVFLGQQERPAPRA 82
Query: 107 ATSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRL 166
+SQ+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFK++AI+WAW+ ST +G+ L
Sbjct: 83 TSSQKCIRTNDIENVGRTARHHTFFEMLGNFSFGDYFKQQAIEWAWQLSTEVYGIDPKHL 142
Query: 167 WISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGC 226
+SV+ +DDEA +IW VGV + I RM DNFW SG TGPCGPCSEIYYDF P+ G
Sbjct: 143 VVSVFREDDEAEQIWRDVVGVNPKRIIRMDEADNFWASGPTGPCGPCSEIYYDFKPELGD 202
Query: 227 SDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYET 286
+DL DD RFIEFYNLVFMQYN+ +GSL PL +NIDTGLGLER+A+ILQKVPNNYET
Sbjct: 203 EGIDLEDDDRFIEFYNLVFMQYNRDAEGSLTPLANRNIDTGLGLERMAQILQKVPNNYET 262
Query: 287 DLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRR 346
DLIFP+I+ A++ A V Y Q +D +LK+IGDH RA+ L+ DGV SN+GRGY++RR
Sbjct: 263 DLIFPLIQAAADCAGVDYHQLDDAGKTSLKVIGDHSRAVTQLICDGVTASNLGRGYILRR 322
Query: 347 LIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREE 406
L+RR VR GRLLGI FL + E +I L V R++ IL EL+REE
Sbjct: 323 LLRRVVRHGRLLGIN--------KPFLVMMGEASIALLKDAHPSVLERQEVILAELQREE 374
Query: 407 LRFVQTLERGEKLLDQMLADALSRTRESGSVPR-LSGQDAFLLYDTFGFPVEITKEVAEE 465
RF++TLERGEKLL ++L S P+ +SG AF LYDT+GFP+E+T+E+AEE
Sbjct: 375 SRFLETLERGEKLLSEVL----------DSKPKQISGAQAFELYDTYGFPLELTQEIAEE 424
Query: 466 HGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLSAKAIV 524
G+ VD+ GF+ ME QR++++AA ++ L++ D+ D + T F GY L + V
Sbjct: 425 QGLEVDLAGFEEAMEQQRQRAKAAAVSIDLTLQDAIDQVVATQKATAFQGYQRLEQPSCV 484
Query: 525 ESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDV 584
++L+ NG+P S G V+++L TPFY E GGQ+GD G L + +V ++ V
Sbjct: 485 QALVANGEPATSASAGDHVQIVLESTPFYGEGGGQVGDRGVL------SGADVIVAIESV 538
Query: 585 KKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETS 644
+S VFVH G I G L VG + A VD R+RA+ +HTATHLLQAALK+V+
Sbjct: 539 SRSR-DVFVHAGRIERGQLTVGDAITAQVDRACRRRAQANHTATHLLQAALKQVVDPGIG 597
Query: 645 QAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIA 704
QAGSLV FDRLRFDF+ + + +L +IE LINGWI +A+ L + MA+D AK AGA+A
Sbjct: 598 QAGSLVDFDRLRFDFHAPQAVTTEQLGQIETLINGWIAEAHGLLVEEMAIDQAKAAGAVA 657
Query: 705 MFGEKYGE 712
MFGEKY +
Sbjct: 658 MFGEKYAD 665
>gi|205830481|sp|Q3AVV3.2|SYA_SYNS9 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
Length = 890
Score = 709 bits (1830), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/669 (54%), Positives = 464/669 (69%), Gaps = 27/669 (4%)
Query: 46 FPSSGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPR 105
P +G IR FL FY RGHKV+ SASL+PEDPTVLLTIAGML FKP+FLG+ R PR
Sbjct: 13 LPQTGAEIRSAFLRFYEERGHKVMASASLIPEDPTVLLTIAGMLPFKPVFLGQQERPAPR 72
Query: 106 AATSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANR 165
A +SQ+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFK++AI+WAW+ ST +G+
Sbjct: 73 ATSSQKCIRTNDIENVGRTARHHTFFEMLGNFSFGDYFKQQAIEWAWQLSTEVYGIDPKH 132
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRG 225
L +SV+ +DDEA +IW VGV + I RM DNFW SG TGPCGPCSEIYYDF P+ G
Sbjct: 133 LVVSVFREDDEAEQIWRDVVGVNPKRIIRMDEADNFWASGPTGPCGPCSEIYYDFKPELG 192
Query: 226 CSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYE 285
+DL DD RFIEFYNLVFMQYN+ +GSL PL +NIDTGLGLER+A+ILQKVPNNYE
Sbjct: 193 DEGIDLEDDDRFIEFYNLVFMQYNRDAEGSLTPLANRNIDTGLGLERMAQILQKVPNNYE 252
Query: 286 TDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVR 345
TDLIFP+I+ A++ A V Y Q +D +LK+IGDH RA+ L+ DGV SN+GRGY++R
Sbjct: 253 TDLIFPLIQAAADCAGVDYHQLDDAGKTSLKVIGDHSRAVTQLICDGVTASNLGRGYILR 312
Query: 346 RLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKRE 405
RL+RR VR GRLLGI FL + E +I L V R++ IL EL+RE
Sbjct: 313 RLLRRVVRHGRLLGIN--------KPFLVMMGEASIALLKDAHPSVLERQEVILAELQRE 364
Query: 406 ELRFVQTLERGEKLLDQMLADALSRTRESGSVPR-LSGQDAFLLYDTFGFPVEITKEVAE 464
E RF++TLERGEKLL ++L S P+ +SG AF LYDT+GFP+E+T+E+AE
Sbjct: 365 ESRFLETLERGEKLLSEVL----------DSKPKQISGAQAFELYDTYGFPLELTQEIAE 414
Query: 465 EHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLSAKAI 523
E G+ VD+ GF+ ME QR++++AA ++ L++ D+ D + T F GY L +
Sbjct: 415 EQGLEVDLAGFEEAMEQQRQRAKAAAVSIDLTLQDAIDQVVATQKATAFQGYQRLEQPSC 474
Query: 524 VESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKD 583
V++L+ NG+P S G V+++L TPFY E GGQ+GD G L + +V ++
Sbjct: 475 VQALVANGEPATSASAGDHVQIVLESTPFYGEGGGQVGDRGVL------SGADVIVAIES 528
Query: 584 VKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQET 643
V +S VFVH G I G L VG + A VD R+RA+ +HTATHLLQAALK+V+
Sbjct: 529 VSRSR-DVFVHAGRIERGQLTVGDAITAQVDRACRRRAQANHTATHLLQAALKQVVDPGI 587
Query: 644 SQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAI 703
QAGSLV FDRLRFDF+ + + +L +IE LINGWI +A+ L + MA+D AK AGA+
Sbjct: 588 GQAGSLVDFDRLRFDFHAPQAVTTEQLGQIETLINGWIAEAHGLLVEEMAIDQAKAAGAV 647
Query: 704 AMFGEKYGE 712
AMFGEKY +
Sbjct: 648 AMFGEKYAD 656
>gi|318040735|ref|ZP_07972691.1| alanyl-tRNA synthetase [Synechococcus sp. CB0101]
Length = 889
Score = 708 bits (1828), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/667 (55%), Positives = 475/667 (71%), Gaps = 25/667 (3%)
Query: 47 PSSGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRA 106
P +G IR FLDFY RGHK + SASLVPEDPTVLLTIAGML FKP+FLG+ R PRA
Sbjct: 16 PRTGAEIRAAFLDFYEQRGHKPMASASLVPEDPTVLLTIAGMLPFKPVFLGQQQRPAPRA 75
Query: 107 ATSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRL 166
+SQ+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFK++AIQWAWE ST FGL L
Sbjct: 76 TSSQKCIRTNDIENVGRTARHHTFFEMLGNFSFGDYFKEQAIQWAWELSTGVFGLSPKNL 135
Query: 167 WISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGC 226
+SV+ +DDEA IW VGV + I RM DNFW SG TGPCGPCSEIYYDF P+ G
Sbjct: 136 VVSVFREDDEAEAIWRDVVGVNPKRIIRMDEADNFWASGPTGPCGPCSEIYYDFKPELGD 195
Query: 227 SDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYET 286
+DL DD+RFIEFYNLVFMQYN+ +G+L PL +NIDTG+GLER+A+ILQ VPNNYET
Sbjct: 196 DGIDLEDDSRFIEFYNLVFMQYNRDAEGTLTPLANRNIDTGMGLERMAQILQAVPNNYET 255
Query: 287 DLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRR 346
DLI+P+I+ A++LA V+Y +D+ +LK+IGDH RAI L+ DGV SN+GRGY++RR
Sbjct: 256 DLIYPLIETAAQLAGVAYPALDDKGKTSLKVIGDHSRAITQLICDGVTASNLGRGYILRR 315
Query: 347 LIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREE 406
L+RR VR GRLLGI + FL ++ E +I L + R + IL EL+REE
Sbjct: 316 LLRRVVRHGRLLGI--------DKPFLTAMGEASIALMQSAYPQLVERREVILAELQREE 367
Query: 407 LRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEH 466
RF++TLERGEKLL +LA ++SG+ AF LYDT+GFP+E+T+E+AEEH
Sbjct: 368 ARFLETLERGEKLLADVLA---------AKPKQISGEQAFELYDTYGFPLELTEEIAEEH 418
Query: 467 GVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLSAKAIVE 525
G+++D++GF+ ME QR++++AA ++ L++ ++ D +A + T F GY+ L + V
Sbjct: 419 GLTMDLEGFEAAMEAQRQRAKAAAVSIDLTLQEAIDQVAADLEATAFRGYELLEQSSCVL 478
Query: 526 SLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVK 585
+L+VNG+P + G V+V+L+ TPFY E GGQ+GD G L + +V + V
Sbjct: 479 ALVVNGEPAQRAVAGDSVQVVLDTTPFYGEGGGQVGDRGVL------SGDELIVAIDAVS 532
Query: 586 KSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQ 645
++ SVFVH G I GVL +G V VD R+RA+ +HTATHLLQAALK+V+ Q
Sbjct: 533 RNR-SVFVHSGRIERGVLSLGDVVHGQVDRACRRRAQANHTATHLLQAALKQVVDPGIGQ 591
Query: 646 AGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAM 705
AGSLV FDRLRFDF+ R + +ELE+IE LINGWI +A+ L+ + MA++ AK AGA+AM
Sbjct: 592 AGSLVDFDRLRFDFHCPRAVSASELEQIEVLINGWISEAHSLEVQEMAIEKAKAAGAVAM 651
Query: 706 FGEKYGE 712
FGEKY +
Sbjct: 652 FGEKYAD 658
>gi|384247035|gb|EIE20523.1| alanyl-tRNA synthetase [Coccomyxa subellipsoidea C-169]
Length = 907
Score = 708 bits (1827), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/686 (52%), Positives = 461/686 (67%), Gaps = 42/686 (6%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQRC 112
IR++FL FY SRGH + ASL+P DPTVLLTIAGMLQFKP+FLG+ PR VPRA T+Q+C
Sbjct: 5 IREKFLSFYESRGHTRMQGASLIPADPTVLLTIAGMLQFKPVFLGQAPRSVPRATTTQKC 64
Query: 113 IRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWISVYE 172
+R +D+EN+G T+RHHTFFEMLGNFSFGDYFK EAIQ AWE ST G+PA R+W+SVY+
Sbjct: 65 VRVSDIENIGVTARHHTFFEMLGNFSFGDYFKAEAIQMAWELSTKVLGIPAQRIWVSVYK 124
Query: 173 DDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSDVDLG 232
DD+EA +W VG P E + R+G +DNFW SG TGPCGPCSE+YYDFHP+RG L
Sbjct: 125 DDEEAAALWRDGVGFPAERLVRLGDEDNFWASGPTGPCGPCSELYYDFHPERGTVGASLE 184
Query: 233 DDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDLIFPI 292
DD+RFIEFYNLVFM+ N+ DG L PL KNIDTG+GLER+A+ILQ VPNNYETDLIFPI
Sbjct: 185 DDSRFIEFYNLVFMESNRGPDGKLTPLANKNIDTGMGLERVAQILQCVPNNYETDLIFPI 244
Query: 293 IKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLIRRAV 352
+ A +LA + Y ++ LK++GDH RA+VY++SDGV PSNIGRGYV+RRLIRR +
Sbjct: 245 VAAAGKLAGLDYHSASPGEQTALKVMGDHARAVVYMVSDGVSPSNIGRGYVLRRLIRRTI 304
Query: 353 RTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELRFVQT 412
GRLLG+K LP++AE I LS D V QRI+ EL REE +F T
Sbjct: 305 MKGRLLGVK--------EVMLPALAETVIGLSDGCDPAVAQNSQRIIAELAREEEKFAST 356
Query: 413 LERG-------------EKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEIT 459
LE G LDQ L GS +SG AF LYDT+GFP+EIT
Sbjct: 357 LEAGGFPCPSYADFLCMSGSLDQFL------LWGDGSTATVSGAAAFELYDTYGFPLEIT 410
Query: 460 KEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDS-ADLAEKIPDTEFLGYD-- 516
+E+A E + VD GF+ EM Q+ +S+ A ++ ++ + DLA+++ T F+GY+
Sbjct: 411 QEMAAERDIQVDAAGFEAEMAAQKSRSREAVRSIDMTAGHALGDLAQQLGRTSFIGYEHG 470
Query: 517 TLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLY---VTQGTN 573
L V ++L G V S G +VEV+L+RTPFYAESGGQ+GD G L + G N
Sbjct: 471 PLRVPGSVLAILRGGSSVESASAGDEVEVILDRTPFYAESGGQVGDRGCLTGVASSSGNN 530
Query: 574 QQTAV------VEVKDVKKS-LGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHT 626
+ + V+D +K+ G++ VH G+I G L VG+ V A VD RQ A+ HHT
Sbjct: 531 GAASSSGSGLELRVRDTQKAGGGALVVHHGSIERGDLHVGQMVMAEVDTSSRQGARKHHT 590
Query: 627 ATHLLQAALKKVIGQ--ETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDA 684
ATHLLQ+ALK+V+ + E SQ GS+V DRLRFDFN HR L + E+ +E L+NGW+ +
Sbjct: 591 ATHLLQSALKQVLKEEGEISQQGSMVTADRLRFDFNLHRGLKEAEVARVEELVNGWVTED 650
Query: 685 NLLQTKVMALDDAKRAGAIAMFGEKY 710
L T+ M L +AK AGA+AMFGEKY
Sbjct: 651 TALTTREMPLAEAKAAGAVAMFGEKY 676
>gi|317968219|ref|ZP_07969609.1| alanyl-tRNA synthetase [Synechococcus sp. CB0205]
Length = 878
Score = 708 bits (1827), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/667 (54%), Positives = 474/667 (71%), Gaps = 25/667 (3%)
Query: 47 PSSGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRA 106
P +G IR FLDFY RGHK + SASLVPEDPTVLLTIAGML FKP+FLG+ PR RA
Sbjct: 5 PRTGAEIRAAFLDFYEQRGHKPMASASLVPEDPTVLLTIAGMLPFKPVFLGQQPRPSARA 64
Query: 107 ATSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRL 166
+SQ+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFK++AIQWAWE ST FG+ L
Sbjct: 65 TSSQKCIRTNDIENVGRTARHHTFFEMLGNFSFGDYFKEQAIQWAWELSTTVFGISPKNL 124
Query: 167 WISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGC 226
+SV+ +DDEA IW VGV + I RM DNFW SG TGPCGPCSEIYYDF P+ G
Sbjct: 125 VVSVFREDDEAEAIWRDVVGVNPKRIIRMDEADNFWASGPTGPCGPCSEIYYDFKPELGD 184
Query: 227 SDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYET 286
+DL DD+RFIEFYNLVFMQYN+ +GSL PL+ +NIDTG+GLER+A+ILQKVPNNYET
Sbjct: 185 EGIDLEDDSRFIEFYNLVFMQYNRDAEGSLTPLENRNIDTGMGLERMAQILQKVPNNYET 244
Query: 287 DLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRR 346
DLI+P+I+ A+ LA V Y Q + + +LK+IGDH RA+ L+ DGV SN+GRGY++RR
Sbjct: 245 DLIYPLIETAAGLAGVDYRQLDPKGQTSLKVIGDHSRAVTQLICDGVTASNLGRGYILRR 304
Query: 347 LIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREE 406
L+RR VR GRLLGI + FL ++ E +I L + R++ IL ELKREE
Sbjct: 305 LLRRVVRHGRLLGI--------DKPFLTAMGEASIALMQSAYPQLLERQEVILSELKREE 356
Query: 407 LRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEH 466
RF++TLERGEKLL +LA ++SG+ AF LYDT+GFP+E+T+E+AEEH
Sbjct: 357 ARFLETLERGEKLLADVLA---------AKPKQISGEQAFELYDTYGFPLELTQEIAEEH 407
Query: 467 GVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLSAKAIVE 525
G++VD+ GF+ ME QR++++AA ++ L++ D+ D +A + T F GY+ L + V+
Sbjct: 408 GLAVDLDGFEQAMEAQRQRAKAAAVSIDLTLQDAIDQMAADLEATRFRGYELLDHSSSVQ 467
Query: 526 SLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVK 585
+L+VNG+P + G V+++L+ TPFY E GGQ+GD G L + +V ++ V
Sbjct: 468 ALVVNGEPAERAEAGDSVQLVLDTTPFYGEGGGQVGDRGVL------SGDGLIVVIEAVS 521
Query: 586 KSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQ 645
++ SVFVH G + G + VG V VD R+RA+ +HTATHLLQ+ALK+V+ Q
Sbjct: 522 RNR-SVFVHSGRVERGSVSVGDVVHGQVDRACRRRAQANHTATHLLQSALKQVVDPGIGQ 580
Query: 646 AGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAM 705
AGSLV FDRLRFDF+ R + ELE+IE LINGWI +A+ L+ + M ++ AK AGA+AM
Sbjct: 581 AGSLVDFDRLRFDFHCPRAITAAELEQIETLINGWIAEAHSLEVQEMTIEKAKAAGAVAM 640
Query: 706 FGEKYGE 712
FGEKY +
Sbjct: 641 FGEKYSD 647
>gi|116074098|ref|ZP_01471360.1| alanyl-tRNA synthetase [Synechococcus sp. RS9916]
gi|116069403|gb|EAU75155.1| alanyl-tRNA synthetase [Synechococcus sp. RS9916]
Length = 892
Score = 707 bits (1825), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/667 (55%), Positives = 473/667 (70%), Gaps = 20/667 (2%)
Query: 47 PSSGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRA 106
P SG IR FLDF+ +RGHK SASLVPEDPTVLLTIAGML FKPIFLG+ R P A
Sbjct: 14 PRSGAEIRAAFLDFFEARGHKRTASASLVPEDPTVLLTIAGMLPFKPIFLGQQERPAPCA 73
Query: 107 ATSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRL 166
+SQ+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFK++AIQWAWE ST FGL L
Sbjct: 74 TSSQKCIRTNDIENVGRTARHHTFFEMLGNFSFGDYFKEQAIQWAWELSTGVFGLDPKNL 133
Query: 167 WISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGC 226
+SV+ +DDEA +IW VGV + I RM DNFW SG TGPCGPCSEIYYDF P+ G
Sbjct: 134 VVSVFREDDEAEQIWRDVVGVNPKRIIRMDEADNFWASGPTGPCGPCSEIYYDFKPELGD 193
Query: 227 SDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYET 286
+DL DD RFIEFYNLVFMQYN+ +G+L PL +NIDTG+GLER+A+ILQ+VPNNYET
Sbjct: 194 DGIDLEDDDRFIEFYNLVFMQYNRDAEGTLTPLANRNIDTGMGLERMAQILQQVPNNYET 253
Query: 287 DLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRR 346
DLI+P+I+ A+ LA V Y +++ +LK+IGDH RA+ L+ DGV SN+GRGY++RR
Sbjct: 254 DLIYPLIETAAGLAGVDYKALDEKGKTSLKVIGDHSRAVTQLICDGVTASNLGRGYILRR 313
Query: 347 LIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREE 406
L+RR VR GRLLGI FL + E +I L + R++ IL ELKREE
Sbjct: 314 LLRRVVRHGRLLGIA--------KPFLTVMGEASIALMQEAYPQLLERKEVILAELKREE 365
Query: 407 LRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEH 466
RF++TLERGEKLL +LA +++G AF LYDT+GFP+E+T+E+AEEH
Sbjct: 366 ARFLETLERGEKLLADVLA---------AKPAQIAGAQAFELYDTYGFPLELTQEIAEEH 416
Query: 467 GVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLSAKAIVE 525
G++VD+ GF+ ME QR++++AA ++ L++ D+ D +A ++ T F GYD L + V+
Sbjct: 417 GLTVDLAGFEAAMEEQRQRAKAAAVSIDLTLQDAIDQVAAELEATSFRGYDLLEHSSSVQ 476
Query: 526 SLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVK 585
+L+VNG+P + G V+V+L+ TPFY E GGQ+GD G L V G + +V ++ V
Sbjct: 477 ALVVNGEPAQQAGAGDAVQVVLDTTPFYGEGGGQVGDRGVL-VGDGPDGNGLIVVIEGVS 535
Query: 586 KSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQ 645
++ SVFVH G + G L +G V VD R+RA+ +HTATHLLQAALK+V+ Q
Sbjct: 536 RNR-SVFVHSGRVERGSLSIGDVVHGQVDKACRRRAQANHTATHLLQAALKQVVDPGIGQ 594
Query: 646 AGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAM 705
AGSLV F+RLRFDF+ R + ELE+IE LINGWI +A+ L+ + MA++ AK AGA+AM
Sbjct: 595 AGSLVDFERLRFDFHCPRAVKADELEQIEALINGWISEAHSLEVQEMAIEQAKAAGAVAM 654
Query: 706 FGEKYGE 712
FGEKY +
Sbjct: 655 FGEKYAD 661
>gi|87123480|ref|ZP_01079331.1| Alanyl-tRNA synthetase:DHHA1 domain [Synechococcus sp. RS9917]
gi|86169200|gb|EAQ70456.1| Alanyl-tRNA synthetase:DHHA1 domain [Synechococcus sp. RS9917]
Length = 911
Score = 707 bits (1825), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/667 (54%), Positives = 474/667 (71%), Gaps = 20/667 (2%)
Query: 47 PSSGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRA 106
P SG+ IR+ FL FY RGH+ + SASLVPEDPTVLLTIAGML FKP+FLG+ R PRA
Sbjct: 33 PRSGEQIREAFLAFYEQRGHQRIASASLVPEDPTVLLTIAGMLPFKPVFLGQQQRPAPRA 92
Query: 107 ATSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRL 166
+SQ+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFK++AIQWAWE ST FGL L
Sbjct: 93 TSSQKCIRTNDIENVGRTARHHTFFEMLGNFSFGDYFKEQAIQWAWELSTEVFGLSPKNL 152
Query: 167 WISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGC 226
+SV+ +DDE IW VGV + I RM DNFW SG TGPCGPCSEIYYDF P+ G
Sbjct: 153 VVSVFREDDEGEAIWRDRVGVNPKRIIRMDEADNFWASGPTGPCGPCSEIYYDFKPELGD 212
Query: 227 SDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYET 286
+DL DD+RFIEFYNLVFMQYN+ +G+L PL+ +NIDTG+GLER+A+ILQ VPNNYET
Sbjct: 213 DGIDLEDDSRFIEFYNLVFMQYNRDAEGTLTPLENRNIDTGMGLERMAQILQAVPNNYET 272
Query: 287 DLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRR 346
DLI+P+I+ A++LA V+Y + + +LK+IGDH RAI L+ DGV SN+GRGY++RR
Sbjct: 273 DLIYPLIETAAQLAGVAYPALDGKGKTSLKVIGDHSRAITQLIGDGVTASNLGRGYILRR 332
Query: 347 LIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREE 406
L+RR VR GRLLGI + FL ++ E +I L + R + IL EL+REE
Sbjct: 333 LLRRVVRHGRLLGI--------DKPFLTAMGEASIALMQSAYPQLLERREVILAELQREE 384
Query: 407 LRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEH 466
RF++TLERGEKLL +LA ++SG AF LYDT+GFP+E+T+E+AEEH
Sbjct: 385 ARFLETLERGEKLLADVLA---------AKPKQISGAQAFELYDTYGFPLELTEEIAEEH 435
Query: 467 GVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLSAKAIVE 525
G++VD+ GF+ ME QR++++AA ++ L++ ++ D +A + T F GY+ L + V
Sbjct: 436 GLTVDLDGFEAAMEAQRQRAKAAAVSIDLTLQEAIDQVAADLEATAFRGYELLEQSSCVV 495
Query: 526 SLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVK 585
+L+VNG+P + G V+V+L+ TPFY E GGQ+GD G L G + +V ++ V
Sbjct: 496 ALVVNGEPAQRAVAGDSVQVVLDTTPFYGEGGGQVGDRGVLS-GDGPDGHGLIVAIEAVS 554
Query: 586 KSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQ 645
++ SVFVH G I GVL +G V VD R+RA+ +HTATHLLQAALK+V+ Q
Sbjct: 555 RNR-SVFVHSGRIERGVLSLGDVVHGQVDRACRRRAQANHTATHLLQAALKQVVDPGIGQ 613
Query: 646 AGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAM 705
AGSLV FDRLRFDF+ R + ELE+IE LINGWI +A+ L+ + MA++ AK AGA+AM
Sbjct: 614 AGSLVDFDRLRFDFHCPRAVTAAELEQIEALINGWISEAHSLEVQEMAIETAKAAGAVAM 673
Query: 706 FGEKYGE 712
FGEKY +
Sbjct: 674 FGEKYAD 680
>gi|412986392|emb|CCO14818.1| alanyl-tRNA synthetase [Bathycoccus prasinos]
Length = 967
Score = 707 bits (1824), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/674 (53%), Positives = 484/674 (71%), Gaps = 21/674 (3%)
Query: 48 SSGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
+SG +IR +FL+FY + H +LPS+SLVPEDPTVLLTIAGMLQFKPIF+G+ R+V A
Sbjct: 74 NSGRAIRTKFLNFYEKKNHAILPSSSLVPEDPTVLLTIAGMLQFKPIFMGQKEREVKSAT 133
Query: 108 TSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
TSQ+C+RTND+ENVG T+RHHTFFEMLGNFSFGDYFKKEA WAWE S E G+ R+W
Sbjct: 134 TSQKCVRTNDIENVGVTARHHTFFEMLGNFSFGDYFKKEACAWAWELSVKELGIDKERIW 193
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCS 227
+SV+E D+EAF IW EVGVP I RMGA+DNFW +G TGPCGPCSE+YYDF P+ G
Sbjct: 194 VSVFETDEEAFAIWRDEVGVPEARILRMGAEDNFWAAGPTGPCGPCSELYYDFKPELGVE 253
Query: 228 DV-DLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYET 286
V DL DD+RF+EFYNLVFM+ ++ DG PLK KNIDTG+GLER+A+ILQK PNNYET
Sbjct: 254 GVKDLNDDSRFVEFYNLVFMELSRDADGKTTPLKNKNIDTGMGLERVAQILQKKPNNYET 313
Query: 287 DLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRR 346
DL+ PII+KA +A + Y + +++ LK+ DH+RA+ YL+SDGVFPSN+GRGY+VRR
Sbjct: 314 DLMMPIIEKACAMAELKYDECDEKQKRMLKVAADHIRAVTYLISDGVFPSNVGRGYIVRR 373
Query: 347 LIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREE 406
LIRR VR+G+LLG+K +G F +IA+ AIELST D +V R ++I EL+REE
Sbjct: 374 LIRRVVRSGKLLGMKEEGDSK---TFTSAIAKVAIELSTECDPNVMKRSEKIYAELEREE 430
Query: 407 LRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEH 466
L F +TL GE L LAD ++R ++ + ++G +AFLLYDT+GFP++IT +VAE++
Sbjct: 431 LGFKKTLANGENL----LADIIARAKKDKN--GVTGAEAFLLYDTYGFPLDITTDVAEDN 484
Query: 467 GVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDS-ADLAEKIPDTE---FLGYDTLSAKA 522
V VD++GF+ EME R ++AA V ++ D+ A +A+ + + E F+GYD+L ++
Sbjct: 485 NVEVDVEGFETEMEKARNLARAAAKTVDVTTGDALARVADDLNNDEHSAFIGYDSLFSRE 544
Query: 523 IVESLLVN---GKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVV 579
+VN G+ + + +G +V+V+L++TPFYAESGGQI D G + V + +N + V+
Sbjct: 545 SKVLAIVNPKTGEMLERAREGDEVDVVLSQTPFYAESGGQIADVGVM-VIEDSNTEVHVL 603
Query: 580 EVKDVKKSLGSVFVHKGTIREGVLEVGREV-EAIVDPKLRQRAKVHHTATHLLQAALKKV 638
+V+ K + G + H+ + G + V E VD R+RAK +HTATHLLQ+ALK+V
Sbjct: 604 DVQ--KAAGGRIISHRVRVESGEIVAKTSVLETKVDKDSRRRAKANHTATHLLQSALKQV 661
Query: 639 IGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAK 698
+G + SQAGSLV+FDRLRFDFN R EL+EIE L+N WI D+ L+ M + DAK
Sbjct: 662 MGDDVSQAGSLVSFDRLRFDFNSSRGPKPNELDEIEALVNEWIFDSTNLEVAEMPIADAK 721
Query: 699 RAGAIAMFGEKYGE 712
GA MFGEKYG+
Sbjct: 722 AKGATMMFGEKYGD 735
>gi|78214024|ref|YP_382803.1| alanyl-tRNA synthetase [Synechococcus sp. CC9605]
gi|123577380|sp|Q3AGN4.1|SYA_SYNSC RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|78198483|gb|ABB36248.1| alanyl-tRNA synthetase [Synechococcus sp. CC9605]
Length = 889
Score = 706 bits (1823), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/667 (55%), Positives = 476/667 (71%), Gaps = 25/667 (3%)
Query: 47 PSSGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRA 106
P SG+ IR+ FL+FYA RGHK + SASL+P+DPTVLLTIAGML FKP+FLG+ R PRA
Sbjct: 14 PRSGEEIREAFLNFYAERGHKRMASASLIPDDPTVLLTIAGMLPFKPVFLGQQERPAPRA 73
Query: 107 ATSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRL 166
+SQ+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFK+ AI+WAWE ST +G+ L
Sbjct: 74 TSSQKCIRTNDIENVGRTARHHTFFEMLGNFSFGDYFKQRAIEWAWELSTGVYGIDPKNL 133
Query: 167 WISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGC 226
+SV+ +DDEA IW VGV + I RM DNFW SG TGPCGPCSEIYYDF P+ G
Sbjct: 134 VVSVFREDDEAELIWRDVVGVNPKRIIRMDEADNFWASGPTGPCGPCSEIYYDFKPELGD 193
Query: 227 SDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYET 286
D+DL DD RFIEFYNLVFMQYN+ +G+L PL +NIDTG+GLER+A+ILQKVPNNYET
Sbjct: 194 EDIDLEDDDRFIEFYNLVFMQYNRDAEGTLTPLANRNIDTGMGLERMAQILQKVPNNYET 253
Query: 287 DLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRR 346
DLIFP+I+ A++LA V Y Q ND+ +LK+IGDH RA+ L+ DGV SN+GRGY++RR
Sbjct: 254 DLIFPLIQAAADLAGVDYHQLNDKGKTSLKVIGDHSRAVTQLICDGVTASNLGRGYILRR 313
Query: 347 LIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREE 406
L+RR VR GRLLGI + FL ++ E AI L V R++ IL EL+REE
Sbjct: 314 LLRRVVRHGRLLGI--------DKPFLVTMGEAAIALLKGAHPSVIERQEVILAELQREE 365
Query: 407 LRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEH 466
RF++TLERGEKLL ++LA + ++SG AF LYDT+GFP+E+T+E+AEE
Sbjct: 366 ARFLETLERGEKLLAEVLASKPT---------QISGAQAFELYDTYGFPLELTQEIAEEQ 416
Query: 467 GVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLSAKAIVE 525
G++VD+ GF+ ME QR++++AA ++ L++ D+ D + T F GY+ L + V+
Sbjct: 417 GLAVDLDGFEAAMEEQRQRAKAAAVSIDLTLQDAIDQVVADQAATCFEGYEALDHASCVQ 476
Query: 526 SLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVK 585
+L+VNG P G V+V+L+ TPFY E GGQ+GD G L G++ +V ++ V
Sbjct: 477 ALVVNGGPSTTAKAGDAVQVVLDTTPFYGEGGGQVGDRGVL---AGSD---LIVRIESVS 530
Query: 586 KSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQ 645
+S VFVH G + G L +G V+A VD R+RA+ +HTATHLLQAALK+V+ Q
Sbjct: 531 RSR-DVFVHAGRVERGELALGDTVKAQVDRACRRRAQANHTATHLLQAALKQVVDPGIGQ 589
Query: 646 AGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAM 705
AGSLV FDRLRFDF+ + +L+++E LINGWI +A+ LQ + MA+D AK AGA+AM
Sbjct: 590 AGSLVDFDRLRFDFHCPTAVTPDQLQQVETLINGWINEAHALQVQEMAIDQAKAAGAVAM 649
Query: 706 FGEKYGE 712
FGEKY +
Sbjct: 650 FGEKYAD 656
>gi|33860604|ref|NP_892165.1| alanyl-tRNA synthetase [Prochlorococcus marinus subsp. pastoris
str. CCMP1986]
gi|41018179|sp|Q7V3N0.1|SYA_PROMP RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|33633546|emb|CAE18503.1| Alanyl-tRNA synthetase [Prochlorococcus marinus subsp. pastoris
str. CCMP1986]
Length = 886
Score = 706 bits (1823), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/679 (50%), Positives = 484/679 (71%), Gaps = 25/679 (3%)
Query: 39 VEDKSQDFPSSGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGK 98
++ ++++ P +GD IRK FL+FY + HK++PSASL+P+DPTV+LTIAGML FKP+FLG
Sbjct: 1 MKSQTKNTPITGDEIRKEFLNFYHEKLHKIIPSASLIPDDPTVMLTIAGMLPFKPVFLGL 60
Query: 99 VPRQVPRAATSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE 158
R RA +SQ+CIRTND+ENVG T+RHHTFFEMLGNFSFGDYFKKEAI+WAWE T
Sbjct: 61 KERPSKRATSSQKCIRTNDIENVGVTARHHTFFEMLGNFSFGDYFKKEAIEWAWELVTDI 120
Query: 159 FGLPANRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYY 218
+GL A + +SV+ +DD++ +IW +++G+ + I ++G DNFW+SG TGPCGPCSE+Y+
Sbjct: 121 YGLSAENIIVSVFHEDDDSVKIWKEDIGIHPKRIIKLGEKDNFWSSGKTGPCGPCSELYF 180
Query: 219 DFHPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQ 278
DF P++G ++DL D RFIEFYNLVFMQYN+ DG L LK KNIDTG+GLER+A+ILQ
Sbjct: 181 DFKPEKGVQNIDLEDGDRFIEFYNLVFMQYNRDPDGQLTDLKYKNIDTGMGLERMAQILQ 240
Query: 279 KVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNI 338
K NNYETDLIFPII+KASE++ + Y S +RT ++LKIIGDH+RA+++L+SDGV SN+
Sbjct: 241 KKKNNYETDLIFPIIQKASEISKIDYYSSGERTKISLKIIGDHIRAVIHLISDGVIASNL 300
Query: 339 GRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRI 398
GRGY++RRLIRR VR GRLLG+K + FL +A I+L D+K I
Sbjct: 301 GRGYILRRLIRRMVRHGRLLGLKNE--------FLSKLASVGIKLMQENYPDLKNNCDHI 352
Query: 399 LEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEI 458
L E+K EE+RF +TLERGEKLLD+++ S ++G AF LYDT+GFP+E+
Sbjct: 353 LSEIKIEEIRFRETLERGEKLLDELI---------SSGQKMITGFKAFELYDTYGFPLEL 403
Query: 459 TKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPD-TEFLGYDT 517
T+E+A+E+ + VD+KGFD EM Q+ +++AA + L+++ S + + D T F GYD+
Sbjct: 404 TEEIAQENNIGVDVKGFDKEMSAQKERAKAASQIIDLTLEGSLEREIDLFDKTLFNGYDS 463
Query: 518 LSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTA 577
L + A ++ + + V + S+G V ++L++T FY ESGGQ+GD G + +N
Sbjct: 464 LDSDAEIKGIFLESTLVKQASEGQKVLIVLDQTSFYGESGGQVGDIGTIL----SNDLEV 519
Query: 578 VVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKK 637
VV+ KK +VF+H G +++G+L +G++V+ V+ R +A +HTATHLLQ+ALK
Sbjct: 520 VVDNVIRKK---NVFLHYGIVKKGILSLGQKVKTKVNDLARAKAAANHTATHLLQSALKV 576
Query: 638 VIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDA 697
V+ + Q GSLVAF++LRFDFN +P+ ++ ++E L+N WI + + L K MA +A
Sbjct: 577 VVNESVGQKGSLVAFNKLRFDFNSSKPITKDQIFKVETLVNSWILENHSLNIKNMAKSEA 636
Query: 698 KRAGAIAMFGEKYGEQVKI 716
GA+AMFGEKY ++V++
Sbjct: 637 LERGAVAMFGEKYDDEVRV 655
>gi|123967582|ref|YP_001008440.1| alanyl-tRNA synthetase [Prochlorococcus marinus str. AS9601]
gi|205830182|sp|A2BNH2.1|SYA_PROMS RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|123197692|gb|ABM69333.1| Alanyl-tRNA synthetase [Prochlorococcus marinus str. AS9601]
Length = 886
Score = 704 bits (1818), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/669 (51%), Positives = 476/669 (71%), Gaps = 25/669 (3%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
+GD IR FL FY+ + HK++PSASL+P+DPTV+LTIAGML FKP+FLG R RA +
Sbjct: 11 TGDEIRNAFLKFYSEKLHKIIPSASLIPDDPTVMLTIAGMLPFKPVFLGLKERPSKRATS 70
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
SQ+CIRTND+ENVG T+RHHTFFEMLGNFSFGDYFK+EAIQWAWE T + L + +
Sbjct: 71 SQKCIRTNDIENVGVTARHHTFFEMLGNFSFGDYFKREAIQWAWELVTNIYQLSVENIIV 130
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
SV+ +D+E+ +IW+ E+G+ + I ++G +DNFW+SG TGPCGPCSE+YYDFHP++G +
Sbjct: 131 SVFHEDEESAKIWSDEIGIHPDRIVKLGEEDNFWSSGKTGPCGPCSELYYDFHPEKGLQN 190
Query: 229 VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDL 288
+DL D RFIEFYNLVFMQYN+ +G L LK KNIDTG+GLER+A+ILQK NNYETDL
Sbjct: 191 IDLEDGDRFIEFYNLVFMQYNRDPNGKLTDLKFKNIDTGMGLERMAQILQKKQNNYETDL 250
Query: 289 IFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLI 348
IFPII+K E+AN+ Y S+D+ ++LKIIGDH RA+++L+SDGV SN+GRGY++RRLI
Sbjct: 251 IFPIIQKICEIANIDYFSSDDKNKISLKIIGDHTRAVIHLISDGVSASNLGRGYILRRLI 310
Query: 349 RRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELR 408
RR VR GRLLGI + FLP IA I L + D+K IL E+K EE+R
Sbjct: 311 RRMVRHGRLLGITNE--------FLPHIASVGINLMQNNYPDLKNNNDLILNEIKIEEIR 362
Query: 409 FVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGV 468
F +TLERGEKLLD+++ S +SG AF LYDT+GFP+E+T E+AEEH +
Sbjct: 363 FRETLERGEKLLDELI---------SSGQKLISGFKAFELYDTYGFPLELTVEIAEEHSI 413
Query: 469 SVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPD-TEFLGYDTLSAKAIVESL 527
SVD+KGF+ EM Q+ +++AA + + L+++ S + + + T F GY +L ++A ++ +
Sbjct: 414 SVDVKGFEEEMNVQKERAKAASSNIDLTLEGSLEREIDVFNKTVFNGYKSLLSEAEIKGI 473
Query: 528 LVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVKKS 587
++ V + S+G V ++L++T FY ESGGQ+GD G ++ +N +V+ KK
Sbjct: 474 FLDSTLVKEASEGQKVLIVLDQTTFYGESGGQVGDIGTIF----SNDVEVLVDNVMRKK- 528
Query: 588 LGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQAG 647
+VF+H GTI++G L +G++V+ V R +A +HTATHLLQ+ALK VI + Q G
Sbjct: 529 --NVFLHYGTIKKGKLTIGQKVKTNVSSSNRAKAAANHTATHLLQSALKSVINESVGQKG 586
Query: 648 SLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAMFG 707
SLVAF++LRFDFN P+ ++ +IE L+N WI + + L+ K M+ +A GA+AMFG
Sbjct: 587 SLVAFNKLRFDFNSSNPISKDQISKIETLVNSWIMENHSLEIKNMSKSEALEKGAVAMFG 646
Query: 708 EKYGEQVKI 716
EKY ++V++
Sbjct: 647 EKYDDEVRV 655
>gi|126695385|ref|YP_001090271.1| alanyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301]
gi|205830177|sp|A3PA95.1|SYA_PROM0 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|126542428|gb|ABO16670.1| Alanyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301]
Length = 886
Score = 704 bits (1816), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/672 (51%), Positives = 476/672 (70%), Gaps = 31/672 (4%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
+GD IR FL FY+ + HK++PSASL+P+DPTV+LTIAGML FKP+FLG R RA +
Sbjct: 11 TGDEIRNAFLKFYSEKLHKIIPSASLIPDDPTVMLTIAGMLPFKPVFLGLKERPSKRATS 70
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
SQ+CIRTND+ENVG T+RHHTFFEMLGNFSFGDYFK+EAIQWAWE T + L + +
Sbjct: 71 SQKCIRTNDIENVGVTARHHTFFEMLGNFSFGDYFKREAIQWAWELVTNIYQLSVENIIV 130
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
SV+ +D+E+ +IW E+G+ + I ++G +DNFW+SG TGPCGPCSE+YYDFHP++G +
Sbjct: 131 SVFHEDEESAKIWIDEIGIHPDRIVKLGEEDNFWSSGKTGPCGPCSELYYDFHPEKGLQN 190
Query: 229 VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDL 288
+DL D RFIEFYNLVFMQYN+ +G L LK KNIDTG+GLER+A+ILQK NNYETDL
Sbjct: 191 IDLEDGDRFIEFYNLVFMQYNRDQNGKLTDLKFKNIDTGMGLERMAQILQKKQNNYETDL 250
Query: 289 IFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLI 348
IFPII+K E+AN+ Y S+D+ ++LKIIGDH RA+++L+SDGV SN+GRGY++RRLI
Sbjct: 251 IFPIIQKICEIANIDYFSSDDKNKISLKIIGDHTRAVIHLISDGVAASNLGRGYILRRLI 310
Query: 349 RRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELR 408
RR VR GRLLGI + FLP IA I L + D+K IL E+K EE+R
Sbjct: 311 RRMVRHGRLLGITNE--------FLPHIASVGINLMQNNYPDLKNNNDLILNEIKIEEIR 362
Query: 409 FVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGV 468
F +TLERGEKLLD+++ S +SG AF LYDT+GFP+E+T E+AEE+ +
Sbjct: 363 FRETLERGEKLLDELI---------SSGQKLISGFKAFELYDTYGFPLELTVEIAEENSI 413
Query: 469 SVDMKGFDIEMENQRRQSQAAHNAVKLSVDDS----ADLAEKIPDTEFLGYDTLSAKAIV 524
SVD+KGF+ EM Q+ +++AA + + L+++ S DL K T F GY++L ++A +
Sbjct: 414 SVDVKGFEEEMNAQKERAKAASSNIDLTLEGSLEREIDLFNK---TVFNGYNSLLSEAEI 470
Query: 525 ESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDV 584
+ + ++ V + S+G V ++L++T FY ESGGQ+GD G ++ + V V +V
Sbjct: 471 KGIFLDSTLVKQASEGQKVLIVLDQTTFYGESGGQVGDIGTIF------SKDVEVLVDNV 524
Query: 585 KKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETS 644
+ +VF+H GTI++G+L +G++V+ V R +A +HTATHLLQ+ALK ++ +
Sbjct: 525 MRK-KNVFLHHGTIKKGILTIGQKVKTNVSSSNRAKAAANHTATHLLQSALKLIVNESVG 583
Query: 645 QAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIA 704
Q GSLVAF++LRFDFN P+ ++ +IE L+N WI + + L+ K M+ +A GA+A
Sbjct: 584 QKGSLVAFNKLRFDFNSSNPISKDQISKIETLVNSWIMENHALEIKNMSKSEALEKGAVA 643
Query: 705 MFGEKYGEQVKI 716
MFGEKY ++V++
Sbjct: 644 MFGEKYDDEVRV 655
>gi|78778430|ref|YP_396542.1| alanyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9312]
gi|123554842|sp|Q31DD9.1|SYA_PROM9 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|78711929|gb|ABB49106.1| alanyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9312]
Length = 886
Score = 704 bits (1816), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/672 (51%), Positives = 475/672 (70%), Gaps = 31/672 (4%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
+GD IR FL FY+ + HK++PSASL+P+DPTV+LTIAGML FKP+FLG R RA +
Sbjct: 11 TGDEIRNAFLKFYSEKLHKIIPSASLIPDDPTVMLTIAGMLPFKPVFLGLKERPSKRATS 70
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
SQ+CIRTND+ENVG T+RHHTFFEMLGNFSFGDYFK+EAIQWAWE T + L + +
Sbjct: 71 SQKCIRTNDIENVGVTARHHTFFEMLGNFSFGDYFKREAIQWAWELVTNIYQLSVENIIV 130
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
SV+ +D+E+ +IW E+G+ + I ++G +DNFW+SG TGPCGPCSE+YYDFHP++G +
Sbjct: 131 SVFHEDEESAKIWRDEIGIHPDRIVKLGEEDNFWSSGKTGPCGPCSELYYDFHPEKGLQN 190
Query: 229 VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDL 288
+DL D RFIEFYNLVFMQYN+ +G L LK KNIDTG+GLER+A+ILQ+ NNYETDL
Sbjct: 191 IDLEDGDRFIEFYNLVFMQYNRDSNGKLTDLKFKNIDTGMGLERMAQILQEKQNNYETDL 250
Query: 289 IFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLI 348
IFPII+K E+AN+ Y S+D+ ++LKIIGDH RA+++L+SDGV SN+GRGY++RRLI
Sbjct: 251 IFPIIQKICEIANIDYFSSDDKNKISLKIIGDHTRAVIHLISDGVAASNLGRGYILRRLI 310
Query: 349 RRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELR 408
RR VR GRLLGI + FLP IA I L + D+K IL E+K EE+R
Sbjct: 311 RRMVRHGRLLGITNE--------FLPHIATVGINLMQNNYPDLKNNNDLILNEIKIEEIR 362
Query: 409 FVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGV 468
F +TLERGEKLLD+++ S +SG AF LYDT+GFP+E+T E+AEE+ +
Sbjct: 363 FRETLERGEKLLDELI---------SSGQKLISGFKAFELYDTYGFPLELTVEIAEENSI 413
Query: 469 SVDMKGFDIEMENQRRQSQAAHNAVKLSVDDS----ADLAEKIPDTEFLGYDTLSAKAIV 524
SVD+KGF+ EM Q+ +++AA + + L+++ S DL K T F GYD L ++A +
Sbjct: 414 SVDVKGFEEEMNAQKERAKAASSNIDLTLEGSLEREIDLFNK---TVFNGYDLLLSEAEI 470
Query: 525 ESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDV 584
+ + ++ V + S+G V ++L++T FY ESGGQ+GD G ++ + V V +V
Sbjct: 471 KGIFLDSTLVKQASEGQKVLIVLDQTTFYGESGGQVGDIGTIF------SKDLEVLVDNV 524
Query: 585 KKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETS 644
+ +VF+H GTI++G+L +G++V+ V R +A +HTATHLLQ+ALK V+ +
Sbjct: 525 MRK-KNVFLHYGTIKKGILTIGQKVKTNVSSSNRAKAAANHTATHLLQSALKSVVNESVG 583
Query: 645 QAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIA 704
Q GSLVAF++LRFDFN P+ ++ +IE L+N WI + + L+ K M+ +A GA+A
Sbjct: 584 QKGSLVAFNKLRFDFNSSNPISKDQISKIETLVNSWIMENHALEIKNMSKSEALEKGAVA 643
Query: 705 MFGEKYGEQVKI 716
MFGEKY ++V++
Sbjct: 644 MFGEKYDDEVRV 655
>gi|87300751|ref|ZP_01083593.1| alanyl-tRNA synthetase [Synechococcus sp. WH 5701]
gi|87284622|gb|EAQ76574.1| alanyl-tRNA synthetase [Synechococcus sp. WH 5701]
Length = 896
Score = 702 bits (1813), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/672 (53%), Positives = 466/672 (69%), Gaps = 19/672 (2%)
Query: 47 PSSGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRA 106
P SG IR+ FL FY +RGH+ + SASLVP+DPTVLLTIAGML FKP+FLG+ PRA
Sbjct: 15 PHSGAEIREAFLAFYEARGHRRMASASLVPDDPTVLLTIAGMLPFKPVFLGQAEPPSPRA 74
Query: 107 ATSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRL 166
+SQ+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFK EA+ WAWE +T FGL L
Sbjct: 75 TSSQKCIRTNDIENVGRTARHHTFFEMLGNFSFGDYFKTEAMTWAWELATKVFGLDPKHL 134
Query: 167 WISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGC 226
+SV+ DDDEA IW VGV I R+G DNFW SG TGPCGPCSEIYYDF P+ G
Sbjct: 135 VVSVFRDDDEAAVIWRDTVGVDPRRIVRLGEADNFWVSGPTGPCGPCSEIYYDFKPELGV 194
Query: 227 SDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYET 286
+DL DD+RFIEFYNLVFMQ+N+ +G+L PL+ +NIDTGLGLER+A+ILQ NNYET
Sbjct: 195 EHLDLEDDSRFIEFYNLVFMQFNRDAEGNLTPLENRNIDTGLGLERMAQILQGAANNYET 254
Query: 287 DLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRR 346
DLI+P+I+ A+ LA V+Y Q + R +LK+IGDH RAI L++DGV SN+GRGY++RR
Sbjct: 255 DLIYPLIETAATLAGVNYRQLDARGQTSLKVIGDHSRAITQLIADGVTASNLGRGYILRR 314
Query: 347 LIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREE 406
L+RR VR GRLLGI FL ++ E AI L + R I+ EL REE
Sbjct: 315 LLRRVVRHGRLLGIT--------TPFLTAMGEAAIALMVDAYPQLVERRDAIMAELAREE 366
Query: 407 LRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEH 466
RF++TLERGEKLL ++L S ++SG+ AF LYDT+GFP+E+T+E+AEEH
Sbjct: 367 ARFLETLERGEKLLAEVL---------SAGPSQISGEQAFELYDTYGFPLELTEEIAEEH 417
Query: 467 GVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLSAKAIVE 525
G++VD+ GF+ ME QR++++AA + L++ + + +AE++P T+F GY+ L + V
Sbjct: 418 GLAVDLAGFEAAMEAQRQRAKAASVRLDLTLQGAIEAMAEQLPATDFRGYEALEHPSQVM 477
Query: 526 SLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVK-DV 584
+L+VNG+P G V+++L+ TPFY ESGGQIGD G L A V V+ +
Sbjct: 478 ALVVNGEPAQGARAGDAVQIVLDSTPFYGESGGQIGDRGVLAGGAPGAGAEAGVIVRIEA 537
Query: 585 KKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETS 644
+ VH G I G L +G V A+VD R+R + HHTATHLLQAALK+++ +
Sbjct: 538 VSHQRKLIVHHGRIERGELALGDTVTALVDRACRRRVQAHHTATHLLQAALKQLVDPSIA 597
Query: 645 QAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIA 704
QAGSLV F+RLRFDF+ + +LE IE INGWI DA+ L+ + M L+ A+ AGA+A
Sbjct: 598 QAGSLVDFERLRFDFHCPHAISPEDLERIEERINGWIADAHALEVREMELERARSAGAVA 657
Query: 705 MFGEKYGEQVKI 716
MFGEKY + V++
Sbjct: 658 MFGEKYADIVRV 669
>gi|254430394|ref|ZP_05044097.1| alanyl-tRNA synthetase [Cyanobium sp. PCC 7001]
gi|197624847|gb|EDY37406.1| alanyl-tRNA synthetase [Cyanobium sp. PCC 7001]
Length = 907
Score = 702 bits (1813), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/673 (55%), Positives = 470/673 (69%), Gaps = 29/673 (4%)
Query: 47 PSSGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRA 106
P SG IR FL FY RGH+ +PSASLVP+DPTVLLTIAGML FKP+FLG+ R PRA
Sbjct: 16 PRSGADIRSAFLAFYEQRGHRRMPSASLVPDDPTVLLTIAGMLPFKPVFLGQAERPAPRA 75
Query: 107 ATSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRL 166
+SQ+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFK++AIQWAWE ST FGL L
Sbjct: 76 TSSQKCIRTNDIENVGRTARHHTFFEMLGNFSFGDYFKEQAIQWAWELSTEVFGLSPANL 135
Query: 167 WISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGC 226
+SV+ +D EA IW + VGV I RM DNFW SG TGPCGPCSEIYYDF P+ G
Sbjct: 136 VVSVFREDHEAEAIWREVVGVNPRRIIRMDEADNFWASGPTGPCGPCSEIYYDFRPELGD 195
Query: 227 SDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYET 286
+DL DD+RFIEFYNLVFMQYN+ +GSL PL ++IDTG+GLER+A+ILQ VPNNYET
Sbjct: 196 DGIDLEDDSRFIEFYNLVFMQYNRDAEGSLTPLANRSIDTGMGLERMAQILQGVPNNYET 255
Query: 287 DLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRR 346
DLI+P+I+ A+ LA V Y Q + +LK+IGDH RAI L+ DGV SN+GRGY++RR
Sbjct: 256 DLIYPLIETAAALAGVDYRQLEQKGQTSLKVIGDHSRAITQLIGDGVSASNLGRGYILRR 315
Query: 347 LIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREE 406
L+RR VR GRLLGI + FL ++ E AI + R IL EL+REE
Sbjct: 316 LLRRVVRHGRLLGI--------DRPFLKTMGEAAIAQMRQAYPQLDERRTVILAELEREE 367
Query: 407 LRFVQTLERGEKLLDQMLADALSRTRESGSVPR-LSGQDAFLLYDTFGFPVEITKEVAEE 465
RF++TLERGEKLL +LA PR +SG AF LYDT+GFP+E+T+E+AEE
Sbjct: 368 GRFLETLERGEKLLADVLATG----------PRQISGDQAFELYDTYGFPLELTQEIAEE 417
Query: 466 HGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLSAKAIV 524
G++VD++GF+ ME QR++++AA ++ L++ ++ D +A + T F GY+ L + V
Sbjct: 418 QGLTVDLEGFEAAMEAQRQRAKAAAVSIDLTLQEAIDAVAADLEATAFRGYEALEHPSCV 477
Query: 525 ESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAV-----V 579
+L+VNG+P + + G V+++L+ TPFY E GGQ+GD G L G QTAV V
Sbjct: 478 LALVVNGEPAERAAAGDAVQIVLDSTPFYGEGGGQVGDRGVLL---GGGDQTAVDAGVIV 534
Query: 580 EVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVI 639
++ V ++ SVFVH G + G L VG V A VD R+RA+ +HTATHLLQAALK+V+
Sbjct: 535 SIEAVSRNR-SVFVHSGRVERGALAVGDLVTARVDGACRRRAQANHTATHLLQAALKQVV 593
Query: 640 GQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKR 699
+ QAGSLV FDRLRFDF+ R + ELE IE LIN WI + + L + MA+D A+
Sbjct: 594 DPDIGQAGSLVDFDRLRFDFHCPRAVTPEELERIEALINAWISEGHALVVEEMAIDQARA 653
Query: 700 AGAIAMFGEKYGE 712
AGA+AMFGEKYGE
Sbjct: 654 AGAVAMFGEKYGE 666
>gi|205830240|sp|A5GWM4.2|SYA_SYNR3 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
Length = 882
Score = 694 bits (1791), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/667 (55%), Positives = 471/667 (70%), Gaps = 25/667 (3%)
Query: 47 PSSGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRA 106
P G IR FL+FY SRGH+ +PSASL+P DPTVLLTIAGML FKP+FLG+ R PRA
Sbjct: 8 PRRGAEIRAAFLEFYESRGHQPIPSASLIPVDPTVLLTIAGMLPFKPVFLGQQERPAPRA 67
Query: 107 ATSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRL 166
+SQ+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFK++AI+WAWE ST FGL L
Sbjct: 68 TSSQKCIRTNDIENVGRTARHHTFFEMLGNFSFGDYFKQQAIEWAWELSTEVFGLDPKNL 127
Query: 167 WISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGC 226
+SV+ +DDEA IW VGV + I RM DNFW SG TGPCGPCSEIYYDF P G
Sbjct: 128 VVSVFREDDEAEAIWRDVVGVNPKRIIRMDEADNFWASGPTGPCGPCSEIYYDFKPALGD 187
Query: 227 SDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYET 286
D+DL DD+RFIEFYNLVFMQY++ +G+L PL KNIDTGLGLER+A+ILQ VPNNYET
Sbjct: 188 EDIDLEDDSRFIEFYNLVFMQYSRDAEGTLTPLANKNIDTGLGLERMAQILQGVPNNYET 247
Query: 287 DLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRR 346
DLI+P+I+ A+ LA V Y Q + + +LK+IGDH RA+ L+ DGV SN+GRGY++RR
Sbjct: 248 DLIYPLIETAAGLAGVDYRQLDVKGQTSLKVIGDHSRAVTQLICDGVTASNLGRGYILRR 307
Query: 347 LIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREE 406
L+RR VR GRLLGI FL ++ E AI L + R + IL EL+REE
Sbjct: 308 LLRRVVRHGRLLGIS--------KPFLVAMGEAAIALMQAAYPQLNERRELILAELQREE 359
Query: 407 LRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEH 466
RF++TLERGEKLL +LA ++SG+ AF LYDT+GFP+E+T+E+AEEH
Sbjct: 360 ARFLETLERGEKLLADVLA---------AKPKQISGEQAFELYDTYGFPLELTEEIAEEH 410
Query: 467 GVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLSAKAIVE 525
G+SVD+ GF+ ME QR++++AA ++ L++ + + +A + T F GY+ L + V
Sbjct: 411 GLSVDLAGFEAAMEAQRQRAKAAAVSIDLTLQGAIEQMAADLEATAFRGYEALEHPSCVV 470
Query: 526 SLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVK 585
+L+VNG+P S G V+++L+ TPFY E GGQ+GD G L N Q +V ++ V
Sbjct: 471 ALVVNGEPAQTASAGDAVQLVLDSTPFYGEGGGQVGDRGSL------NGQDLIVSIESVN 524
Query: 586 KSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQ 645
+ V VH GTI G L VG V A VDP R+RA+ HHTATHLLQAALK+V+ SQ
Sbjct: 525 RQR-DVSVHHGTIERGQLSVGDLVTAQVDPTCRRRAQAHHTATHLLQAALKQVVDSSISQ 583
Query: 646 AGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAM 705
AGSLV FDRLRFDF+ R + ELE++E LINGWI +A+ L+ + MA++ AK AGA+AM
Sbjct: 584 AGSLVDFDRLRFDFHCPRAVTPAELEQLEALINGWITEAHSLEVQEMAIEAAKAAGAVAM 643
Query: 706 FGEKYGE 712
FGEKY +
Sbjct: 644 FGEKYAD 650
>gi|148243479|ref|YP_001228636.1| alanyl-tRNA synthetase [Synechococcus sp. RCC307]
gi|147851789|emb|CAK29283.1| Alanyl-tRNA synthetase [Synechococcus sp. RCC307]
Length = 915
Score = 694 bits (1791), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/667 (55%), Positives = 471/667 (70%), Gaps = 25/667 (3%)
Query: 47 PSSGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRA 106
P G IR FL+FY SRGH+ +PSASL+P DPTVLLTIAGML FKP+FLG+ R PRA
Sbjct: 41 PRRGAEIRAAFLEFYESRGHQPIPSASLIPVDPTVLLTIAGMLPFKPVFLGQQERPAPRA 100
Query: 107 ATSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRL 166
+SQ+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFK++AI+WAWE ST FGL L
Sbjct: 101 TSSQKCIRTNDIENVGRTARHHTFFEMLGNFSFGDYFKQQAIEWAWELSTEVFGLDPKNL 160
Query: 167 WISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGC 226
+SV+ +DDEA IW VGV + I RM DNFW SG TGPCGPCSEIYYDF P G
Sbjct: 161 VVSVFREDDEAEAIWRDVVGVNPKRIIRMDEADNFWASGPTGPCGPCSEIYYDFKPALGD 220
Query: 227 SDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYET 286
D+DL DD+RFIEFYNLVFMQY++ +G+L PL KNIDTGLGLER+A+ILQ VPNNYET
Sbjct: 221 EDIDLEDDSRFIEFYNLVFMQYSRDAEGTLTPLANKNIDTGLGLERMAQILQGVPNNYET 280
Query: 287 DLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRR 346
DLI+P+I+ A+ LA V Y Q + + +LK+IGDH RA+ L+ DGV SN+GRGY++RR
Sbjct: 281 DLIYPLIETAAGLAGVDYRQLDVKGQTSLKVIGDHSRAVTQLICDGVTASNLGRGYILRR 340
Query: 347 LIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREE 406
L+RR VR GRLLGI FL ++ E AI L + R + IL EL+REE
Sbjct: 341 LLRRVVRHGRLLGIS--------KPFLVAMGEAAIALMQAAYPQLNERRELILAELQREE 392
Query: 407 LRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEH 466
RF++TLERGEKLL +LA ++SG+ AF LYDT+GFP+E+T+E+AEEH
Sbjct: 393 ARFLETLERGEKLLADVLA---------AKPKQISGEQAFELYDTYGFPLELTEEIAEEH 443
Query: 467 GVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLSAKAIVE 525
G+SVD+ GF+ ME QR++++AA ++ L++ + + +A + T F GY+ L + V
Sbjct: 444 GLSVDLAGFEAAMEAQRQRAKAAAVSIDLTLQGAIEQMAADLEATAFRGYEALEHPSCVV 503
Query: 526 SLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVK 585
+L+VNG+P S G V+++L+ TPFY E GGQ+GD G L N Q +V ++ V
Sbjct: 504 ALVVNGEPAQTASAGDAVQLVLDSTPFYGEGGGQVGDRGSL------NGQDLIVSIESVN 557
Query: 586 KSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQ 645
+ V VH GTI G L VG V A VDP R+RA+ HHTATHLLQAALK+V+ SQ
Sbjct: 558 RQR-DVSVHHGTIERGQLSVGDLVTAQVDPTCRRRAQAHHTATHLLQAALKQVVDSSISQ 616
Query: 646 AGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAM 705
AGSLV FDRLRFDF+ R + ELE++E LINGWI +A+ L+ + MA++ AK AGA+AM
Sbjct: 617 AGSLVDFDRLRFDFHCPRAVTPAELEQLEALINGWITEAHSLEVQEMAIEAAKAAGAVAM 676
Query: 706 FGEKYGE 712
FGEKY +
Sbjct: 677 FGEKYAD 683
>gi|72383213|ref|YP_292568.1| alanyl-tRNA synthetase [Prochlorococcus marinus str. NATL2A]
gi|123620600|sp|Q46I13.1|SYA_PROMT RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|72003063|gb|AAZ58865.1| alanyl-tRNA synthetase [Prochlorococcus marinus str. NATL2A]
Length = 886
Score = 691 bits (1782), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/674 (53%), Positives = 466/674 (69%), Gaps = 26/674 (3%)
Query: 45 DFPS-SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQV 103
D PS SGD IR F++F+ HK L S+SL+P+DPTVLLTIAGML FKPIFLG
Sbjct: 10 DPPSLSGDEIRDAFINFFVQHNHKKLASSSLIPDDPTVLLTIAGMLPFKPIFLGLKESST 69
Query: 104 PRAATSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
PRA +SQ+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFKKEAIQWAWE ST F L
Sbjct: 70 PRATSSQKCIRTNDIENVGRTARHHTFFEMLGNFSFGDYFKKEAIQWAWELSTEVFRLNP 129
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPD 223
+ ISV+++D EA +IW + VGV I RMGA DNFW+SGATGPCGPCSE+Y+DF P+
Sbjct: 130 QNIVISVFKEDLEAEQIWKEVVGVDANRIIRMGAADNFWSSGATGPCGPCSELYFDFKPE 189
Query: 224 RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNN 283
G ++DL DD+RFIEFYNLVFMQYN+ G+LEPL +IDTG+GLER+A+ILQK NN
Sbjct: 190 LGSDEIDLEDDSRFIEFYNLVFMQYNRDLKGNLEPLANCHIDTGMGLERMAQILQKKSNN 249
Query: 284 YETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYV 343
YETDLIFP+I A+ LA + Y +N + +LKIIGDH RA+ +L+ DGV SN+GRGY+
Sbjct: 250 YETDLIFPLINAAALLAQIKYETTNKKNKTSLKIIGDHCRAVTHLICDGVSASNLGRGYI 309
Query: 344 VRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELK 403
+RRLIRR +R GRL+GI FLP +AE AIEL + + +++ IL ELK
Sbjct: 310 LRRLIRRMIRHGRLVGII--------QPFLPQLAEIAIELMKNAYPQLLEKKKIILNELK 361
Query: 404 REELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVA 463
EE RF++TLERGEKLL ++ S +SG AF LYDT+GFP+E+T+E+A
Sbjct: 362 IEESRFLETLERGEKLLAEI---------TSHECDLISGAQAFELYDTYGFPLELTEEIA 412
Query: 464 EEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKI-PDTEFLGYDTLSAKA 522
E G+SVD+ GF+ EM QR++++ A ++ L+ + S + + DT F GY+ L +
Sbjct: 413 NEKGISVDINGFENEMAKQRKRAKEASVSIDLTEEGSIEREISLFDDTRFEGYEKLETTS 472
Query: 523 IVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVK 582
V + N + V + +G V++++NRTPFYAESGGQIGD G + Q V V+
Sbjct: 473 TVIGIFKNNESVKQAVQGDLVKIIVNRTPFYAESGGQIGDKGLI------TSQDLEVSVE 526
Query: 583 DVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQE 642
+V+K ++F+H G + GVLE+ V+ V P RQR +HTATHLLQ+ALK I
Sbjct: 527 NVRKK-KNIFIHSGIVNTGVLEINSSVQMNVTPSFRQRTTSNHTATHLLQSALKLSIDSS 585
Query: 643 TSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGA 702
SQ GSLV+ RLRFDFN +PL ELE++E IN WI + +L+Q K M + +A AGA
Sbjct: 586 VSQRGSLVSNHRLRFDFNAPKPLTIKELEDMEARINQWINEDHLIQIKTMPIKEAMAAGA 645
Query: 703 IAMFGEKYGEQVKI 716
+AMFGEKYG+ V++
Sbjct: 646 LAMFGEKYGDVVRV 659
>gi|67925719|ref|ZP_00519029.1| Alanyl-tRNA synthetase, class IIc [Crocosphaera watsonii WH 8501]
gi|67852440|gb|EAM47889.1| Alanyl-tRNA synthetase, class IIc [Crocosphaera watsonii WH 8501]
Length = 615
Score = 689 bits (1777), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/612 (56%), Positives = 457/612 (74%), Gaps = 23/612 (3%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
+G IR RFL FY+ H++LPSASLVPEDPTVLLTIAGML FKPIFLG+ PRA T
Sbjct: 9 TGQEIRDRFLQFYSQYKHQILPSASLVPEDPTVLLTIAGMLPFKPIFLGQKQSDFPRATT 68
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
SQ+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFK++AI+WAWE ST + LP + +
Sbjct: 69 SQKCIRTNDIENVGRTARHHTFFEMLGNFSFGDYFKEQAIKWAWELSTKVYQLPPENIVV 128
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
SV+E+DDEAF++W + +GVP + IKRMG DNFW +G TGPCGPCSE+YYDFHP+ G D
Sbjct: 129 SVFENDDEAFKMWEEIIGVPPQRIKRMGEKDNFWKAGPTGPCGPCSELYYDFHPELGDDD 188
Query: 229 VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDL 288
+DL DD+RFIEFYNLVFM+YN+ DG L PL+ KNIDTG+GLER+A+ILQKVPNNYETDL
Sbjct: 189 IDLEDDSRFIEFYNLVFMEYNRDADGKLTPLQNKNIDTGMGLERMAQILQKVPNNYETDL 248
Query: 289 IFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLI 348
IFPII+ A+ +AN++Y ++ ++T ++LK+IGDH+R++V+++SD + SN RGYV+RRLI
Sbjct: 249 IFPIIETAANIANINYQKATEKTKVSLKVIGDHVRSVVHMISDNITASNTDRGYVLRRLI 308
Query: 349 RRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELR 408
RR VR GRL+GI EG F+ +AE AI+LS V+ R+ I EL+REE
Sbjct: 309 RRVVRHGRLIGI--------EGKFINEVAETAIQLSQKAYPQVRERDSFIKAELEREEAT 360
Query: 409 FVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGV 468
F++TLERGEKL LA+ +S+T + G ++SG DAF LYDTFGFP+E+T+E+AEE +
Sbjct: 361 FLKTLERGEKL----LAEIISKTEKQG---QISGVDAFTLYDTFGFPLELTQEIAEESNL 413
Query: 469 SVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLSAKAIVESL 527
+VD++GF++EME Q+ +S+AAH + L+V S D LAE I TEFLGY L + A VE++
Sbjct: 414 TVDIEGFEVEMEQQQERSKAAHETIDLTVQGSLDKLAEHIHPTEFLGYTDLQSTAKVEAV 473
Query: 528 LVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVKKS 587
L+ GK V + G++++++L++TPFY ESGGQIGD GFL + V+ V DV+K
Sbjct: 474 LIEGKSVETATAGTEIQIVLDKTPFYGESGGQIGDRGFL------TGEDLVIRVDDVQKE 527
Query: 588 LGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQAG 647
G +FVH + G + V ++A +D R+R + +HTATHL AALKKV+ SQAG
Sbjct: 528 SG-IFVHFCRVERGQVSVNEHLKATIDRSCRRRVQANHTATHLFTAALKKVVDDSISQAG 586
Query: 648 SLVAFDRLRFDF 659
SL FDRL+FD
Sbjct: 587 SLGDFDRLKFDL 598
>gi|123965286|ref|YP_001010367.1| alanyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9515]
gi|205830181|sp|A2BTZ9.1|SYA_PROM5 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|123199652|gb|ABM71260.1| Alanyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9515]
Length = 886
Score = 688 bits (1776), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/679 (50%), Positives = 483/679 (71%), Gaps = 25/679 (3%)
Query: 39 VEDKSQDFPSSGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGK 98
++ +SQ P +GD IRK FLDFY S+ H ++PS+SL+P+DPTV+LTIAGML FKP+FLG
Sbjct: 1 MKSQSQATPITGDEIRKAFLDFYESKSHLIIPSSSLIPDDPTVMLTIAGMLPFKPVFLGL 60
Query: 99 VPRQVPRAATSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE 158
R PRA++SQ+C+RTND+ENVG T+RHHTFFEMLGNFSFGDYFKKEAIQWAWE T
Sbjct: 61 RNRPSPRASSSQKCLRTNDIENVGVTARHHTFFEMLGNFSFGDYFKKEAIQWAWELITDI 120
Query: 159 FGLPANRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYY 218
+ L + ISV+ +D E+ +IW +G+ E I R+ DNFW+SGATGPCGPCSE+YY
Sbjct: 121 YHLKPENIIISVFHEDHESEKIWRDNIGIIPERIIRLDEKDNFWSSGATGPCGPCSELYY 180
Query: 219 DFHPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQ 278
DF+P++G ++DL D RFIEFYNLVFMQYN+ +G L LK KNIDTG+GLER+A+ILQ
Sbjct: 181 DFNPEKGLKNIDLEDGDRFIEFYNLVFMQYNRDSNGMLSDLKFKNIDTGMGLERMAQILQ 240
Query: 279 KVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNI 338
K NNYETDLI PI+K+A+ +AN+ Y S+DRT ++LKI+GDH RAI++L+SDGV SN+
Sbjct: 241 KKTNNYETDLILPIVKEAALIANIDYFSSDDRTKISLKILGDHTRAIIHLISDGVVASNL 300
Query: 339 GRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRI 398
GRGY++RRL+RR +R GRLL IK D FL +A I L + D+K ++RI
Sbjct: 301 GRGYILRRLLRRMIRHGRLLAIKDD--------FLSRLASIGISLMQNTYPDLKNNKERI 352
Query: 399 LEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEI 458
L E+ EE RF++TL+RGEKLL+ ++ R+ E +SG AF LYDT+GFP+E+
Sbjct: 353 LREINIEEKRFLETLDRGEKLLNDLI-----RSGEK----LISGTKAFELYDTYGFPLEL 403
Query: 459 TKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPD-TEFLGYDT 517
TKE+ EE ++VD++GF EME Q+ +++AA + L++ S + + D T F GYD+
Sbjct: 404 TKEILEEKNINVDLEGFTREMEAQKERAKAASQKIDLTLKGSIEREIDLFDQTIFEGYDS 463
Query: 518 LSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTA 577
L+++ IV+ + V K +G V+++L++T FY ESGGQ+GD G + ++ A
Sbjct: 464 LNSQGIVKGIFFESNSVEKAIQGQTVQIILDQTSFYGESGGQVGDTGTI------SRNDA 517
Query: 578 VVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKK 637
+++ V + ++F+H GT+R+G + + VE VD R +A+ +HTATHLLQ+ALK
Sbjct: 518 EIDIDKVIRK-KNIFLHCGTVRKGEICRNQLVETRVDKFNRAKAESNHTATHLLQSALKL 576
Query: 638 VIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDA 697
+I + SQ GSLV F++LRFDFN +PL ++ ++E L+N WI + + ++ K M DDA
Sbjct: 577 IIDKSVSQRGSLVGFNKLRFDFNSPQPLSKEQISQVESLVNSWISENHPIEVKNMDKDDA 636
Query: 698 KRAGAIAMFGEKYGEQVKI 716
+AGA+AMFGEKYG+ V++
Sbjct: 637 LKAGALAMFGEKYGDIVRV 655
>gi|284929441|ref|YP_003421963.1| alanyl-tRNA synthetase [cyanobacterium UCYN-A]
gi|284809885|gb|ADB95582.1| alanyl-tRNA synthetase [cyanobacterium UCYN-A]
Length = 880
Score = 686 bits (1770), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/669 (50%), Positives = 473/669 (70%), Gaps = 23/669 (3%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
+G+ IR +FL FY + H++ PSASL+P DPTVLLTIAGML FKPIFLG+ R T
Sbjct: 9 TGNEIRDKFLHFYKGKKHQIFPSASLIPRDPTVLLTIAGMLPFKPIFLGQEKSSFSRITT 68
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
SQ+CIRTND++NVG T+RHHTFFEMLGNFSFGDYFK+++I+WAWE ST F LP + +
Sbjct: 69 SQKCIRTNDIDNVGYTARHHTFFEMLGNFSFGDYFKEQSIRWAWELSTQIFLLPPESIVV 128
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
SV+E DDEAF IW +G+P I RMG DNFW +G TGPCGPCSE+YYDFHP+ G +
Sbjct: 129 SVFESDDEAFNIWENIIGIPQTRIIRMGEKDNFWKAGKTGPCGPCSELYYDFHPELGEQN 188
Query: 229 VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDL 288
++L DD+RFIEFYNLVFM+Y++ ++G+L PL +KNIDTG+GLER+A+ILQKVPNNYETDL
Sbjct: 189 LNLEDDSRFIEFYNLVFMEYSRDENGNLFPLGKKNIDTGMGLERMAQILQKVPNNYETDL 248
Query: 289 IFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLI 348
IFPII+ + + Y + + T +LKIIGDH+RA++++++DG+ SN RGYV+RR+I
Sbjct: 249 IFPIIESILNIIAIEYRHAEENTKKSLKIIGDHIRAVIHMIADGITASNTDRGYVLRRII 308
Query: 349 RRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELR 408
RR +R GRL+GI EG F+ IA+ AI++S +V+ +E I +EL +EE
Sbjct: 309 RRIIRHGRLIGI--------EGKFINKIAQTAIQISEKSYPEVREKEIFISKELSKEEDI 360
Query: 409 FVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGV 468
F++TLERGEKLL +++ + + ++SG DAF+LYDT+GFP+E+T+E+AEE +
Sbjct: 361 FLKTLERGEKLLCEIIDNTIKPN-------QISGLDAFILYDTYGFPLELTQEIAEESQL 413
Query: 469 SVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLSAKAIVESL 527
V++ F +M+ Q+ +S+AAH + LS+ + L + T+F GY L++ +V+ +
Sbjct: 414 KVNIDEFYEQMKLQQCRSKAAHENINLSLGYEINKLISDVDATKFTGYSDLNSSVVVKKI 473
Query: 528 LVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVKKS 587
LVN K V + KG++V+++L+ TPFYAESGGQ+ D+G+L + + + D++K
Sbjct: 474 LVNQKVVQQAEKGNNVQIILDSTPFYAESGGQVSDHGYLV------GHKSFIRINDIQKE 527
Query: 588 LGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQAG 647
VF+H G I EG L ++A+VD RQ K++HT+THLLQAAL+K + +QAG
Sbjct: 528 -SEVFIHYGKIEEGYLLTNETLDAVVDNNYRQCIKLNHTSTHLLQAALRKNLDSSITQAG 586
Query: 648 SLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAMFG 707
SLV FDRLRFDF + + ++E+IE +N WI + + + + M+L AK GAIAMFG
Sbjct: 587 SLVTFDRLRFDFQYPHQITIEQIEQIENTVNFWISEKHDVSIENMSLKVAKEKGAIAMFG 646
Query: 708 EKYGEQVKI 716
EKY E+V++
Sbjct: 647 EKYSEEVRV 655
>gi|194476839|ref|YP_002049018.1| alanyl-tRNA synthetase [Paulinella chromatophora]
gi|171191846|gb|ACB42808.1| alanyl-tRNA synthetase [Paulinella chromatophora]
Length = 891
Score = 685 bits (1767), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/671 (52%), Positives = 474/671 (70%), Gaps = 20/671 (2%)
Query: 47 PSSGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRA 106
P +G IR+ FLDF+A RGH+ + SA L+P+D TVLLTIAGML FKPIFLG+ A
Sbjct: 12 PMTGAEIREAFLDFFAKRGHQRMASALLIPDDSTVLLTIAGMLPFKPIFLGREQPPALSA 71
Query: 107 ATSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRL 166
+SQ+CIRTND+ENVG+T+RHHTFFEMLGNFSFG+YFK++AI WAWE ST FGL L
Sbjct: 72 TSSQKCIRTNDIENVGKTARHHTFFEMLGNFSFGNYFKEQAIIWAWELSTEVFGLDPANL 131
Query: 167 WISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGC 226
+S++++D+EA IW +GV + I RMGA DNFW SG GPCGPCSEIYYDFHPD G
Sbjct: 132 VVSIFQEDNEAALIWQNLIGVNPKRIIRMGAKDNFWASGPIGPCGPCSEIYYDFHPDLGH 191
Query: 227 SDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYET 286
D++L DD+RFIEFYNLVFM+ N G+L PL+ KNIDTG+GLER+A+ILQK NNYET
Sbjct: 192 DDINLEDDSRFIEFYNLVFMESNCDSQGNLTPLENKNIDTGMGLERMAQILQKKSNNYET 251
Query: 287 DLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRR 346
DLIFP+IKKA+ LA + Y++ N++ ++LK+IGDH RAI L+ DGV SN+GRGY++RR
Sbjct: 252 DLIFPLIKKAASLAGIDYSEVNEKGKISLKVIGDHSRAISQLICDGVSASNLGRGYILRR 311
Query: 347 LIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREE 406
L+RR VR GRLLGI FL ++ E +IEL + ++ + IL EL +EE
Sbjct: 312 LLRRVVRHGRLLGINDH--------FLVAMGEASIELMSKAYPQLEEKRDIILNELAQEE 363
Query: 407 LRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEH 466
RF++TLERGEKLL +L ++SG+ AF LYDT+GFP+E+T+E+ +EH
Sbjct: 364 ARFLETLERGEKLLSDIL---------KSENQQISGEQAFELYDTYGFPLELTQEITQEH 414
Query: 467 GVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-LAEKIPDTEFLGYDTLSAKAIVE 525
G +VD+ GF++ M+ QR++++ A + ++ + + +AE I T F GY+ L V
Sbjct: 415 GRTVDVAGFEVAMKAQRQRAKEAIVTIDPTLRSTIEGIAESIKPTLFFGYEVLDRSCQVV 474
Query: 526 SLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVK 585
+L+V + V + S G V+V+L+ TPFY ESGGQ+GD G L ++ T + + +V +++V
Sbjct: 475 ALIVKDELVQEASTGDVVKVILDGTPFYGESGGQVGDRGMLLGSE-TEKTSLIVIIENVS 533
Query: 586 KSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQ 645
++ G +F+H G I++G L +G V A VD LR+RA+ HHTATHLLQ+ALK+++ SQ
Sbjct: 534 RNQG-LFIHSGRIKKGTLRIGDLVIAKVDTHLRRRAQAHHTATHLLQSALKQLVDASISQ 592
Query: 646 AGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAM 705
AGSLV FDRLRFDF++ + +LE+IE LIN WI + + ++ M L+ AK GAIAM
Sbjct: 593 AGSLVDFDRLRFDFSYPGAISLEKLEKIENLINDWINEIHRVEVTEMKLEQAKVNGAIAM 652
Query: 706 FGEKYGEQVKI 716
FGEKYG V++
Sbjct: 653 FGEKYGAYVRV 663
>gi|254527157|ref|ZP_05139209.1| alanyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202]
gi|221538581|gb|EEE41034.1| alanyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202]
Length = 886
Score = 684 bits (1766), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/669 (50%), Positives = 476/669 (71%), Gaps = 25/669 (3%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
+GD IR FL FY+ + HK++PSASLVP+DPTV+LTIAGML FKP+FLG R RA +
Sbjct: 11 TGDEIRNAFLKFYSEKFHKIIPSASLVPDDPTVMLTIAGMLPFKPVFLGLKERPSKRATS 70
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
SQ+CIRTND+ENVG T+RHHTFFEMLGNFSFGDYFK+EAIQWAWE T + L ++ + +
Sbjct: 71 SQKCIRTNDIENVGVTARHHTFFEMLGNFSFGDYFKREAIQWAWELVTKIYKLSSDNIIV 130
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
SV+ +D+E+ +IW +E+G+ + I ++G DNFW+SG TGPCGPCSE+YYDF+P++G
Sbjct: 131 SVFHEDEESEKIWREEIGINPDRIVKLGEKDNFWSSGKTGPCGPCSELYYDFNPEKGLKY 190
Query: 229 VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDL 288
VDL D RFIEFYNLVFMQ+N+ +G L LK KNIDTG+GLER+A+ILQK NNYETDL
Sbjct: 191 VDLEDGDRFIEFYNLVFMQHNRDSNGKLTDLKFKNIDTGMGLERMAQILQKKSNNYETDL 250
Query: 289 IFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLI 348
IFPIIKKASE++++ Y S++RT ++ KI+GDH RA+++L+SDGV SN+GRGY++RRL+
Sbjct: 251 IFPIIKKASEISSLDYFSSDERTKISFKILGDHTRAVIHLISDGVSASNLGRGYILRRLL 310
Query: 349 RRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELR 408
RR VR GRLLGI + FL IA I+L + D+K + IL E+K EE+R
Sbjct: 311 RRMVRHGRLLGITKE--------FLSDIASVGIKLMENYYPDLKNNNELILSEIKIEEVR 362
Query: 409 FVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGV 468
F +TLERGEKLLD+++ S ++G AF LYDT+GFP+E+T+E+A E+ +
Sbjct: 363 FRETLERGEKLLDEII---------SSGQKLITGFKAFELYDTYGFPLELTEEIAGENNI 413
Query: 469 SVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLA-EKIPDTEFLGYDTLSAKAIVESL 527
VD++GF EM+ Q+ +++AA + + L+++ S + + T F G D L ++A ++ +
Sbjct: 414 KVDIEGFQREMDAQKERAKAASSKIDLTLEGSLEREIDSFNKTIFNGEDCLDSEAKIQGI 473
Query: 528 LVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVKKS 587
++ V K S+G V+++L++T FY ESGGQ+GD G + T VV K+
Sbjct: 474 FLDSNFVKKASEGQRVQIVLDQTSFYGESGGQVGDIGIICSTDAEVLVDKVVRKKN---- 529
Query: 588 LGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQAG 647
VF+H G ++ G+L VG+ ++ IV+P R RA +HTATHLLQ+ALK+V+ + SQ G
Sbjct: 530 ---VFLHDGIVKNGILTVGQTIKTIVNPAKRARASANHTATHLLQSALKEVVNKNVSQKG 586
Query: 648 SLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAMFG 707
SLVAF++LRFDFN +P+ + ++ ++E L+N WI + L K M +A GA+AMFG
Sbjct: 587 SLVAFNKLRFDFNASKPVSEDQIRKVESLVNSWIIQNHPLVIKNMPKREALEKGALAMFG 646
Query: 708 EKYGEQVKI 716
EKYG++V++
Sbjct: 647 EKYGDEVRV 655
>gi|124024771|ref|YP_001013887.1| alanyl-tRNA synthetase [Prochlorococcus marinus str. NATL1A]
gi|205830178|sp|A2BZG2.1|SYA_PROM1 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|123959839|gb|ABM74622.1| Alanyl-tRNA synthetase [Prochlorococcus marinus str. NATL1A]
Length = 886
Score = 681 bits (1758), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/662 (53%), Positives = 459/662 (69%), Gaps = 25/662 (3%)
Query: 50 GDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATS 109
GD IR+ F++F+ H+ L S+SL+P+DPTVLLTIAGML FKPIFLG PRA +S
Sbjct: 16 GDEIREAFINFFVQHNHQKLASSSLIPDDPTVLLTIAGMLPFKPIFLGLKESSTPRATSS 75
Query: 110 QRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWIS 169
Q+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFKKEAIQWAWE ST F L + IS
Sbjct: 76 QKCIRTNDIENVGRTARHHTFFEMLGNFSFGDYFKKEAIQWAWELSTEVFRLNPQNIVIS 135
Query: 170 VYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSDV 229
V+++D EA +IW + VGV I RMGA DNFW+SGATGPCGPCSE+Y+DF P+ G ++
Sbjct: 136 VFKEDLEAEQIWKEVVGVDANRIIRMGAADNFWSSGATGPCGPCSELYFDFKPELGSDEI 195
Query: 230 DLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDLI 289
DL DD+RFIEFYNLVFMQYN+ +G+LEPL +IDTG+GLER+A+ILQK NNYETDLI
Sbjct: 196 DLEDDSRFIEFYNLVFMQYNRDLEGNLEPLANCHIDTGMGLERMAQILQKKSNNYETDLI 255
Query: 290 FPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLIR 349
FP+IK A+ LA + Y +N + +LKIIGDH RA+ +L+ DGV SN+GRGY++RRLIR
Sbjct: 256 FPLIKAAALLAQLEYETTNKKNKTSLKIIGDHCRAVTHLICDGVSASNLGRGYILRRLIR 315
Query: 350 RAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELRF 409
R +R GRL+GI FLP +AE AIEL + + +++ IL ELK EE RF
Sbjct: 316 RMIRHGRLVGIV--------QPFLPQLAEMAIELMKNAYPQLLEKKKIILNELKIEESRF 367
Query: 410 VQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGVS 469
++TLERGEKLL ++ S +SG AF LYDT+GFP+E+T+E+A E G+S
Sbjct: 368 LETLERGEKLLAEI---------TSHECDLISGAQAFELYDTYGFPLELTEEIANEKGIS 418
Query: 470 VDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPD-TEFLGYDTLSAKAIVESLL 528
VD+ GF+ EM QR++++ A ++ L+ + S + + D T F GY+ L + V +
Sbjct: 419 VDINGFENEMAKQRKRAKEASVSIDLTEEGSIEREISLFDETRFEGYEKLETTSTVIGIF 478
Query: 529 VNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVKKSL 588
N + V + +G V++++NRTPFYAESGGQIGD G + Q V V++V+K
Sbjct: 479 KNNESVKQAVQGDLVKIIVNRTPFYAESGGQIGDKGII------TSQDLEVSVENVRKK- 531
Query: 589 GSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQAGS 648
++F+H G + GVLE+ V+ V P RQR +HTATHLLQ+ALK I SQ GS
Sbjct: 532 KNIFIHSGIVNTGVLEINSSVQMNVTPSFRQRTTSNHTATHLLQSALKLSIDSSVSQRGS 591
Query: 649 LVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAMFGE 708
LV+ RLRFDFN +PL ELE++E IN WI + + +Q K M + +A AGA+AMFGE
Sbjct: 592 LVSNHRLRFDFNAPKPLTIKELEDMEVRINQWINEDHPIQIKTMPIKEAMAAGALAMFGE 651
Query: 709 KY 710
KY
Sbjct: 652 KY 653
>gi|157412393|ref|YP_001483259.1| alanyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9215]
gi|205830179|sp|A8G242.1|SYA_PROM2 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|157386968|gb|ABV49673.1| Alanyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9215]
Length = 886
Score = 680 bits (1755), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/672 (50%), Positives = 477/672 (70%), Gaps = 31/672 (4%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
+GD IR FL FY+ + HK++PSASLVP+DPTV+LTIAGML FKP+FLG R RA +
Sbjct: 11 TGDEIRNAFLKFYSEKFHKIIPSASLVPDDPTVMLTIAGMLPFKPVFLGLKERPSKRATS 70
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
SQ+CIRTND+ENVG T+RHHTFFEMLGNFSFGDYFK+EAIQWAWE T + L + + +
Sbjct: 71 SQKCIRTNDIENVGVTARHHTFFEMLGNFSFGDYFKREAIQWAWELVTKIYKLSSENIIV 130
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
S++ +D+E+ +IW +E+G+ + I ++G DNFW+SG TGPCGPCSE+YYDF+P++G
Sbjct: 131 SIFHEDEESEKIWIEEIGINPDRIVKLGEKDNFWSSGKTGPCGPCSELYYDFNPEKGLKY 190
Query: 229 VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDL 288
VDL D RFIEFYNLVFMQ+N+ +G L LK KNIDTG+GLER+A+ILQK NNYETDL
Sbjct: 191 VDLEDGDRFIEFYNLVFMQHNRDSNGKLTDLKFKNIDTGMGLERMAQILQKKSNNYETDL 250
Query: 289 IFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLI 348
IFPII+KAS++++++Y S++RT ++ KI+GDH RA+++L+SDGV SN+GRGY++RRL+
Sbjct: 251 IFPIIQKASKISSINYFSSDERTKISFKILGDHTRAVIHLISDGVSASNLGRGYILRRLL 310
Query: 349 RRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELR 408
RR VR GRLLGIK + FL IA I+L + D+K + IL E+K EE+R
Sbjct: 311 RRMVRHGRLLGIKKE--------FLSDIASVGIKLMENNYPDLKNNNELILSEIKIEEVR 362
Query: 409 FVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGV 468
F +TLERGEKLLD+++ S +SG AF LYDT+GFP+E+T+E+A E+ +
Sbjct: 363 FRETLERGEKLLDEII---------SSGQKLISGFKAFELYDTYGFPLELTEEIAGENNI 413
Query: 469 SVDMKGFDIEMENQRRQSQAAHNAVKLSVDDS----ADLAEKIPDTEFLGYDTLSAKAIV 524
VD++GF EM+ Q+ +++AA + + L+++ S DL K T F G D L ++A +
Sbjct: 414 KVDIEGFQREMDAQKERAKAASSNIDLTLEGSLEREIDLFNK---TIFNGEDCLDSEAKI 470
Query: 525 ESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDV 584
+ + ++ V K S+G V+++L++T FY ESGGQ+GD G + T VV K+
Sbjct: 471 QGIFLDSNLVKKASEGQRVQIVLDQTSFYGESGGQVGDNGIICSTDAEILVDKVVRKKN- 529
Query: 585 KKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETS 644
VF+H G ++ G+ VG+ ++ +V+P R RA +HTATHLLQ+ALK+V+ + S
Sbjct: 530 ------VFLHDGIVKNGIFTVGQTIKTVVNPAKRVRASANHTATHLLQSALKEVVNKNVS 583
Query: 645 QAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIA 704
Q GSLVAF++LRFDFN +P+ + ++ ++E L+N WI + L K M +A GA+A
Sbjct: 584 QKGSLVAFNKLRFDFNASKPVSEDQIRKVESLVNSWIIQNHPLVIKNMPKREALEKGALA 643
Query: 705 MFGEKYGEQVKI 716
MFGEKYG++V++
Sbjct: 644 MFGEKYGDEVRV 655
>gi|449016224|dbj|BAM79626.1| alanine--tRNA ligase [Cyanidioschyzon merolae strain 10D]
Length = 1031
Score = 641 bits (1653), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/700 (49%), Positives = 461/700 (65%), Gaps = 56/700 (8%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLG-KVPRQVPRAA 107
S + IR FL+FY RGH+V+PSASLVP+DPT+LLTIAGM+ FKPIFLG + P PRA
Sbjct: 104 SSNEIRAAFLEFYQQRGHRVVPSASLVPDDPTILLTIAGMVPFKPIFLGQRQPPDPPRAV 163
Query: 108 TSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
++QRC+RTND+ENVGRT RHHTFFEMLGNFSFGDYFK+++I+WAWE T +G+P RL
Sbjct: 164 SAQRCLRTNDIENVGRTKRHHTFFEMLGNFSFGDYFKEQSIRWAWELITEVYGIPRERLC 223
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCS 227
+SV D EA+EIW VG+P I RM DNFW+SG TGPCGPCSE+YYDF P+ G +
Sbjct: 224 VSVLHADQEAYEIWRDVVGLPEHRIVRMSETDNFWSSGPTGPCGPCSEVYYDFKPELGTN 283
Query: 228 ------------------DVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLG 269
+DL DD RFIE YNLVFM++N+ +G L PL+ +NIDTG+G
Sbjct: 284 VASGGHETSVPPATAGTGILDLNDDERFIELYNLVFMEFNRDTEGRLMPLQARNIDTGMG 343
Query: 270 LERIARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLL 329
LERIA++LQ VPNNYETDL+ P++ K +ELA +YA ++R ++ KI+ DH RA+V+LL
Sbjct: 344 LERIAQVLQGVPNNYETDLMRPLLDKTAELAGRAYASLSERERVSAKIVADHARAVVHLL 403
Query: 330 SDGVFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDS 389
+DGV PSN+GRGYV+RRLIRR VR GR LGI E AF +A A+ L+
Sbjct: 404 ADGVQPSNLGRGYVLRRLIRRMVRHGRQLGI--------EQAFTEVVAGTAVALAADAGY 455
Query: 390 -DVKAREQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLL 448
V RI EL+ EE+RF QTLERGE LL ++L RE+ +SG+DAF L
Sbjct: 456 LHVAEHRARITRELQMEEVRFRQTLERGEALLAELL-------RENRG--HISGEDAFEL 506
Query: 449 YDTFGFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEK-- 506
YDT+GFPVE+T+E+A E G+ +DM F ME QR +++ + + ++L +
Sbjct: 507 YDTYGFPVEMTQEIAAEQGLQIDMDAFQRCMEAQRARARERGRPGSIDLPAESELVAQLG 566
Query: 507 -----IPDTEFLGYDTLS-AKAIVESLLVNGKPV---IKVSKGS--DVEVLLNRTPFYAE 555
I TEF+GY+ A A + +L+V+GK V V +GS V+V+L+RTPFYAE
Sbjct: 567 GNGTAIDRTEFVGYEQEQVATARIVALIVDGKAVQSLASVPEGSLNKVQVILDRTPFYAE 626
Query: 556 SGGQIGDYGFLYVTQGTNQQTAVVEVKDVKKSLGSVFVHKGTI--REGVLEVGREVEAIV 613
GGQ+ D G L + Q + + V DV++ LG+ ++H ++ L VG V A +
Sbjct: 627 GGGQVADTGELQLVQ--REPRIALRVADVQQ-LGNAWIHTASLDGTSADLHVGDVVTARI 683
Query: 614 DPKLRQRAKVHHTATHLLQAALKKVIG-QETSQAGSLVAFDRLRFDFNFHRPLLDTELEE 672
D R+R + HHT THLLQAAL++V+G + +QAGSLV +RLRFDF R L D ELE
Sbjct: 684 DAARRRRIRAHHTGTHLLQAALRQVLGADQVAQAGSLVDSERLRFDFTAPRALTDRELEL 743
Query: 673 IERLINGWIGDANLLQTKVMALDDAKRAGAIAMFGEKYGE 712
+ L+N WI +A+ L + + +A + GAIAMFGEKYG+
Sbjct: 744 VSELVNQWIDEAHPLIVEHLPYPEAVQRGAIAMFGEKYGD 783
>gi|410668025|ref|YP_006920396.1| alanyl-tRNA synthetase AlaS [Thermacetogenium phaeum DSM 12270]
gi|409105772|gb|AFV11897.1| alanyl-tRNA synthetase AlaS [Thermacetogenium phaeum DSM 12270]
Length = 878
Score = 608 bits (1569), Expect = e-171, Method: Compositional matrix adjust.
Identities = 318/672 (47%), Positives = 433/672 (64%), Gaps = 24/672 (3%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLV-PEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
+G +R +FL F++ H +LPSASLV +DP++LL +AGM+ FKP FLGK PR
Sbjct: 3 TGAELRDKFLKFFSGHDHLILPSASLVLKDDPSLLLVVAGMVPFKPYFLGKAQPPHPRVT 62
Query: 108 TSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
TSQ+C+RT D+E VGRT+RHHTFFEMLGNFSFGDYFKKEAI WAWE+ T E GL LW
Sbjct: 63 TSQKCLRTQDLEAVGRTARHHTFFEMLGNFSFGDYFKKEAIAWAWEYLTREMGLSPKDLW 122
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCS 227
I+VY DD EA +IW+ +GVP E I +G + NFW +G GPCGPCSEI D P+RGC
Sbjct: 123 ITVYRDDQEAADIWHDSIGVPRERIVPLGKETNFWEAGPVGPCGPCSEILIDLGPERGCG 182
Query: 228 DVDLGDDT---RFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNY 284
D G D R++E +NLVFM++N+ ++G+ L ++NIDTG+GLERIA ++Q VPNN+
Sbjct: 183 SPDCGVDCECDRYLELWNLVFMEFNRDEEGNFTELPRQNIDTGMGLERIASVVQGVPNNF 242
Query: 285 ETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVV 344
ETDL+FP+IK+ S +A +SY +++ ++++ LK+I DH RA+ +L+ DGV PSN GRGYV+
Sbjct: 243 ETDLLFPLIKEVSAIAGISY-RADPKSDVALKVIADHARAVAFLIGDGVLPSNEGRGYVL 301
Query: 345 RRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKR 404
RR++RRAVR GRL+GI GAF I + I L ++ R I + +
Sbjct: 302 RRILRRAVRYGRLVGIT--------GAFFSRITGRVISLYGDHYRELAERSDYIQKIVAL 353
Query: 405 EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAE 464
EE RFV TLE+G ++L++ L + +T E L G AF LYDTFGFP+E+T+E+
Sbjct: 354 EEERFVGTLEQGLQILEEYL-EKFEKTGEKS----LPGGVAFRLYDTFGFPLELTQEILA 408
Query: 465 EHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTLSAKAIV 524
E G+SVDM GF ME QR++++AA A + T+F GY +LS + +
Sbjct: 409 ERGLSVDMDGFRSSMEKQRQKARAAWLETAPINSFGVCTAYRCSKTDFQGYASLSTSSQI 468
Query: 525 ESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDV 584
++LL G+ + S+G DVE++L RT FY E GGQ+GD G + G + V D
Sbjct: 469 QALLSKGEEKGEASEGEDVEIVLERTSFYPEGGGQVGDRGIISGPAGE------IAVSDT 522
Query: 585 KKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETS 644
K++ V VH G + G++ V A VD KLR +HTATHLL AL++V+G
Sbjct: 523 KRTPDDVIVHYGRVIRGIIRKDDLVLAQVDEKLRLATARNHTATHLLHKALREVLGDHVQ 582
Query: 645 QAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIA 704
Q GSLVA DRLRFDF+ PL E+E +E L+N I D ++ T DD + AIA
Sbjct: 583 QMGSLVAPDRLRFDFSHFAPLSPEEIERVEELVNEKILDNLIVNTFEARRDDPRVRDAIA 642
Query: 705 MFGEKYGEQVKI 716
+FGEKYG+ V++
Sbjct: 643 LFGEKYGDVVRV 654
>gi|357419710|ref|YP_004932702.1| alanyl-tRNA synthetase [Thermovirga lienii DSM 17291]
gi|355397176|gb|AER66605.1| alanyl-tRNA synthetase [Thermovirga lienii DSM 17291]
Length = 879
Score = 608 bits (1569), Expect = e-171, Method: Compositional matrix adjust.
Identities = 312/674 (46%), Positives = 446/674 (66%), Gaps = 27/674 (4%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
SG +R+ FL F+ S+GHK PS SLVP+DP++L TIAGM+ FKP FLG+ +V RA T
Sbjct: 5 SGKELREMFLSFFESKGHKRYPSFSLVPDDPSILFTIAGMVPFKPYFLGQKTPEVTRATT 64
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
SQ+C+RTND++NVGRT+RHHTFFEMLGNFSFGDYFKKEA +AWEF T GL +RL+
Sbjct: 65 SQKCVRTNDIDNVGRTARHHTFFEMLGNFSFGDYFKKEASLFAWEFLTERVGLDPDRLYP 124
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
++Y+DD+EAFEIWNK VGVP I R+G +DNFW+ G GPCGPCSE+ YD P+ C
Sbjct: 125 TIYKDDEEAFEIWNKVVGVPANRIYRLGEEDNFWSVGPVGPCGPCSELIYDQGPEFSCGS 184
Query: 229 VDLG---DDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYE 285
D G D R++E +NLVFMQYN+ ++G+L PL +KNIDTG+GLER+A ++Q+V ++E
Sbjct: 185 PDCGLECDCDRYLEVWNLVFMQYNRDEEGNLNPLPKKNIDTGMGLERLASVVQQVKGDFE 244
Query: 286 TDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVR 345
TDL P++ KAS + V+Y + R ++ ++++ DHLRA+ ++++DG+ PSN GRGYV+R
Sbjct: 245 TDLFKPLVAKASSIMGVNYG-AGGREDMAVRVVSDHLRAVAFMIADGIMPSNEGRGYVLR 303
Query: 346 RLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKRE 405
R++RRAVR GRL G+ E FL + E+ ++ + I + +++E
Sbjct: 304 RILRRAVRYGRLAGV--------ERPFLTELLPVLNEIMADPYEELILHKNLIEQVIEQE 355
Query: 406 ELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEE 465
ELRF +TLE+G LL++ + R +S LSG AF LYDTFGFP E+T+E+ +E
Sbjct: 356 ELRFGRTLEQGTTLLEEEI-----RNVKSSGGKTLSGVVAFELYDTFGFPFELTEEICKE 410
Query: 466 HGVSVDMKGFDIEMENQRRQSQAA---HNAVKLSVDDSADLAEKIPDTEFLGYDTLSAKA 522
GV V + F EME QR +++AA + K+ +D+ L + + +EF GY+ +
Sbjct: 411 AGVEVKFEEFQKEMEKQRERARAAWAKSESNKIEMDEG--LLKDLEPSEFTGYEKEEDEG 468
Query: 523 IVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVK 582
V +++V+ + ++G + V+LN+TPFY E GGQ+GD G L G + V
Sbjct: 469 KVLAVVVDNEKKEACAEGQECYVVLNKTPFYGEKGGQVGDEGVLEWQPGGRAK-----VL 523
Query: 583 DVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQE 642
D + S G +VHK + G L+VG V A VD R++ K HHT+THLL AL +V+G
Sbjct: 524 DTQVSSGGHYVHKVRVESGKLKVGDFVVAKVDSGRRKKIKAHHTSTHLLHEALIRVLGDH 583
Query: 643 TSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGA 702
QAGSLVA D LRFDF +P+ E++E+E ++ G I D L+T + +++AK+ GA
Sbjct: 584 VRQAGSLVAPDFLRFDFTHVKPMTKDEIKEVENIVFGVITDNLALETHITNIEEAKKLGA 643
Query: 703 IAMFGEKYGEQVKI 716
A+F EKYG++V++
Sbjct: 644 KALFEEKYGDKVRV 657
>gi|365175184|ref|ZP_09362621.1| alanine-tRNA ligase [Synergistes sp. 3_1_syn1]
gi|363613523|gb|EHL65034.1| alanine-tRNA ligase [Synergistes sp. 3_1_syn1]
Length = 883
Score = 607 bits (1564), Expect = e-171, Method: Compositional matrix adjust.
Identities = 315/673 (46%), Positives = 439/673 (65%), Gaps = 25/673 (3%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
SG +R+ FL F+ +G K S SLVP+DPT+L TIAGM+ FKP FLG +V RA T
Sbjct: 5 SGKELRELFLKFFEEKGCKRYHSFSLVPDDPTLLFTIAGMVPFKPYFLGLKTPEVTRATT 64
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
SQ+C+RTND+ENVGRT+RHHTFFEMLGNFSFGDYFK E I WAWEF T GL NRL+
Sbjct: 65 SQKCVRTNDIENVGRTARHHTFFEMLGNFSFGDYFKPEIIPWAWEFLTERVGLDPNRLYA 124
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
+VY DDDEAF+IW+++VG+P E I R+GADDNFW +G GPCGPCSEI YD C
Sbjct: 125 TVYLDDDEAFDIWHEKVGLPKERIFRLGADDNFWAAGPVGPCGPCSEIIYDQGEKFSCGK 184
Query: 229 --VDLGDDT-RFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYE 285
+G D R++E +NLVFMQYN+ + G+L PL KNIDTG+GLER+A ++Q+VPN++E
Sbjct: 185 PTCTVGCDCDRYLEIWNLVFMQYNRDEAGNLTPLPHKNIDTGMGLERLASVVQRVPNDFE 244
Query: 286 TDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVR 345
TDL PI+ KA EL NV Y + R ++ +K+I DH+RA ++++DG+ P+N G GYV+R
Sbjct: 245 TDLFRPIMDKACELVNVKYGEDPKR-DMAVKVISDHIRASAFMIADGILPANDGTGYVLR 303
Query: 346 RLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKRE 405
RLIRR VR GRLLGI+ L SI ++ EL K + I + L E
Sbjct: 304 RLIRRCVRYGRLLGIEEPFLTKLLPVVRESIGDEYQEL--------KEQAATIEQVLSLE 355
Query: 406 ELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEE 465
E RF +TL +G LLD +A E+G +L G AF+LYDTFGFP+E+T+E+ EE
Sbjct: 356 EERFSRTLAQGSDLLDSEIAKL-----EAGKENKLPGDVAFVLYDTFGFPLELTEEICEE 410
Query: 466 HGVSVDMKGFDIEMENQRRQSQAAHNAVK--LSVDDSADLAEKIPDTEFLGYDTLSAKAI 523
G+SVD GF+ ME QR +++A+ +S + +LA+KI + F GY + +A
Sbjct: 411 RGISVDKDGFEAAMEEQRERARASSKQTSSVISKNVYTELADKIAPSPFCGYTEVKCEAQ 470
Query: 524 VESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKD 583
V++++++G+ + G++ +++L+ TPFYAE GGQ+GD G + + T EV D
Sbjct: 471 VKAIIIDGELAESAAAGAEADIVLSDTPFYAEKGGQVGDTGTITASGMT------FEVAD 524
Query: 584 VKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQET 643
+ + VH+G + GV++ G V A ++ + R + HHTATHL+ AL +V+G+
Sbjct: 525 TVYPVADLIVHRGKVLSGVVKTGDGVTAEINAERRAEIQRHHTATHLMHEALARVLGKHV 584
Query: 644 SQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAI 703
QAGS+V LRFDFN P+ EL E+E ++ + + T VMA+++AK+ GA
Sbjct: 585 RQAGSIVTPTFLRFDFNHFAPVTLDELREVEGIVYAEVLKNKPVVTTVMAIEEAKKTGAR 644
Query: 704 AMFGEKYGEQVKI 716
A+F EKYG++V++
Sbjct: 645 ALFDEKYGDEVRV 657
>gi|413952520|gb|AFW85169.1| hypothetical protein ZEAMMB73_280974 [Zea mays]
Length = 1088
Score = 600 bits (1548), Expect = e-169, Method: Compositional matrix adjust.
Identities = 307/439 (69%), Positives = 373/439 (84%), Gaps = 1/439 (0%)
Query: 279 KVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNI 338
+VPNNYETDLIFPII+KA+ +A VSYA+++D T NLKIIGDH+RA+VYL+SDGV PSNI
Sbjct: 421 EVPNNYETDLIFPIIEKAASMAMVSYAKADDATKTNLKIIGDHMRAVVYLISDGVIPSNI 480
Query: 339 GRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRI 398
GRGYVVRRLIRR VR GRL+GI+GDG GN EGAFLPS+AE I LST IDSDV++R + I
Sbjct: 481 GRGYVVRRLIRRVVRMGRLIGIRGDGHGNSEGAFLPSLAEVVISLSTEIDSDVESRRRSI 540
Query: 399 LEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEI 458
L EL+REE+RFVQTLERGEKLL ++L +AL +G+ P LSG++ FLLYDT+GFPVEI
Sbjct: 541 LGELQREEMRFVQTLERGEKLLAELLDEALLNAGNNGNKPSLSGKNVFLLYDTYGFPVEI 600
Query: 459 TKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTL 518
T E+A E GV+VD++GFDIEMENQR+QSQAAHN V+LSV + ++ + IPDTEFLGYD+L
Sbjct: 601 TAEIASEQGVTVDIEGFDIEMENQRKQSQAAHNVVRLSVGNETEIVKNIPDTEFLGYDSL 660
Query: 519 SAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTN-QQTA 577
SA A+++ LLVNG PV +VS+GS+VE+LL+RTPFYAESGGQ+GD GFLYV G + +QT
Sbjct: 661 SASAVIKGLLVNGNPVNEVSQGSEVEILLDRTPFYAESGGQVGDNGFLYVNGGEDRRQTT 720
Query: 578 VVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKK 637
V+E+ DV+KSLG++FVHKG I++G +EVG+EV+A VD KLRQ AK HHTATHLLQ+ALK
Sbjct: 721 VIEINDVQKSLGNIFVHKGMIKQGSVEVGKEVDASVDAKLRQGAKAHHTATHLLQSALKS 780
Query: 638 VIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDA 697
V+G ETSQAGSLVAFD LRFDFNFHRPL + EL IE LIN WIG+A ++TKVMAL DA
Sbjct: 781 VVGSETSQAGSLVAFDHLRFDFNFHRPLSEEELTTIEALINQWIGNAAHVETKVMALQDA 840
Query: 698 KRAGAIAMFGEKYGEQVKI 716
K AGAIAMFGEKYGEQV++
Sbjct: 841 KNAGAIAMFGEKYGEQVRV 859
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 200/261 (76%), Positives = 230/261 (88%), Gaps = 1/261 (0%)
Query: 20 TGVPSARSTSASVQPLTEEVEDKSQDFPSSGDSIRKRFLDFYASRGHKVLPSASLVPEDP 79
G+ ++ T ASV+P T+E+ + SGD+IR+RFL+FYA+RGHK+LPS+SLVP DP
Sbjct: 34 VGLRASPRTRASVEPATQEL-GTADAVEWSGDAIRRRFLEFYAARGHKILPSSSLVPGDP 92
Query: 80 TVLLTIAGMLQFKPIFLGKVPRQVPRAATSQRCIRTNDVENVGRTSRHHTFFEMLGNFSF 139
TV LTIAGMLQFKPIFLGK PR+VPRA TSQ+CIRTND+ENVGRT+RH TFFEMLGNFSF
Sbjct: 93 TVFLTIAGMLQFKPIFLGKEPRRVPRATTSQKCIRTNDIENVGRTARHQTFFEMLGNFSF 152
Query: 140 GDYFKKEAIQWAWEFSTVEFGLPANRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADD 199
GDYFKKEA WAWE +T E+GLPA RLWISV+EDD+EAF IW+ EVGVP E I+RMGA+D
Sbjct: 153 GDYFKKEATTWAWELATKEYGLPAERLWISVFEDDNEAFNIWHNEVGVPKERIQRMGAED 212
Query: 200 NFWNSGATGPCGPCSEIYYDFHPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPL 259
NFW SGATGPCGPCSEIYYDF+P+RG SDVDLGDD+RFIEFYNLVFMQYNKKDDGSLEPL
Sbjct: 213 NFWTSGATGPCGPCSEIYYDFYPERGSSDVDLGDDSRFIEFYNLVFMQYNKKDDGSLEPL 272
Query: 260 KQKNIDTGLGLERIARILQKV 280
KQ NIDTG+GLER+ARILQK+
Sbjct: 273 KQMNIDTGMGLERMARILQKL 293
>gi|413952519|gb|AFW85168.1| hypothetical protein ZEAMMB73_280974 [Zea mays]
Length = 1115
Score = 600 bits (1548), Expect = e-169, Method: Compositional matrix adjust.
Identities = 307/439 (69%), Positives = 373/439 (84%), Gaps = 1/439 (0%)
Query: 279 KVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNI 338
+VPNNYETDLIFPII+KA+ +A VSYA+++D T NLKIIGDH+RA+VYL+SDGV PSNI
Sbjct: 448 EVPNNYETDLIFPIIEKAASMAMVSYAKADDATKTNLKIIGDHMRAVVYLISDGVIPSNI 507
Query: 339 GRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRI 398
GRGYVVRRLIRR VR GRL+GI+GDG GN EGAFLPS+AE I LST IDSDV++R + I
Sbjct: 508 GRGYVVRRLIRRVVRMGRLIGIRGDGHGNSEGAFLPSLAEVVISLSTEIDSDVESRRRSI 567
Query: 399 LEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEI 458
L EL+REE+RFVQTLERGEKLL ++L +AL +G+ P LSG++ FLLYDT+GFPVEI
Sbjct: 568 LGELQREEMRFVQTLERGEKLLAELLDEALLNAGNNGNKPSLSGKNVFLLYDTYGFPVEI 627
Query: 459 TKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTL 518
T E+A E GV+VD++GFDIEMENQR+QSQAAHN V+LSV + ++ + IPDTEFLGYD+L
Sbjct: 628 TAEIASEQGVTVDIEGFDIEMENQRKQSQAAHNVVRLSVGNETEIVKNIPDTEFLGYDSL 687
Query: 519 SAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTN-QQTA 577
SA A+++ LLVNG PV +VS+GS+VE+LL+RTPFYAESGGQ+GD GFLYV G + +QT
Sbjct: 688 SASAVIKGLLVNGNPVNEVSQGSEVEILLDRTPFYAESGGQVGDNGFLYVNGGEDRRQTT 747
Query: 578 VVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKK 637
V+E+ DV+KSLG++FVHKG I++G +EVG+EV+A VD KLRQ AK HHTATHLLQ+ALK
Sbjct: 748 VIEINDVQKSLGNIFVHKGMIKQGSVEVGKEVDASVDAKLRQGAKAHHTATHLLQSALKS 807
Query: 638 VIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDA 697
V+G ETSQAGSLVAFD LRFDFNFHRPL + EL IE LIN WIG+A ++TKVMAL DA
Sbjct: 808 VVGSETSQAGSLVAFDHLRFDFNFHRPLSEEELTTIEALINQWIGNAAHVETKVMALQDA 867
Query: 698 KRAGAIAMFGEKYGEQVKI 716
K AGAIAMFGEKYGEQV++
Sbjct: 868 KNAGAIAMFGEKYGEQVRV 886
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 196/249 (78%), Positives = 223/249 (89%), Gaps = 1/249 (0%)
Query: 32 VQPLTEEVEDKSQDFPSSGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQF 91
V+P T+E+ + SGD+IR+RFL+FYA+RGHK+LPS+SLVP DPTV LTIAGMLQF
Sbjct: 73 VEPATQEL-GTADAVEWSGDAIRRRFLEFYAARGHKILPSSSLVPGDPTVFLTIAGMLQF 131
Query: 92 KPIFLGKVPRQVPRAATSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWA 151
KPIFLGK PR+VPRA TSQ+CIRTND+ENVGRT+RH TFFEMLGNFSFGDYFKKEA WA
Sbjct: 132 KPIFLGKEPRRVPRATTSQKCIRTNDIENVGRTARHQTFFEMLGNFSFGDYFKKEATTWA 191
Query: 152 WEFSTVEFGLPANRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCG 211
WE +T E+GLPA RLWISV+EDD+EAF IW+ EVGVP E I+RMGA+DNFW SGATGPCG
Sbjct: 192 WELATKEYGLPAERLWISVFEDDNEAFNIWHNEVGVPKERIQRMGAEDNFWTSGATGPCG 251
Query: 212 PCSEIYYDFHPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLE 271
PCSEIYYDF+P+RG SDVDLGDD+RFIEFYNLVFMQYNKKDDGSLEPLKQ NIDTG+GLE
Sbjct: 252 PCSEIYYDFYPERGSSDVDLGDDSRFIEFYNLVFMQYNKKDDGSLEPLKQMNIDTGMGLE 311
Query: 272 RIARILQKV 280
R+ARILQK+
Sbjct: 312 RMARILQKL 320
>gi|205830260|sp|A5D3F4.2|SYA_PELTS RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
Length = 877
Score = 600 bits (1548), Expect = e-169, Method: Compositional matrix adjust.
Identities = 311/675 (46%), Positives = 442/675 (65%), Gaps = 28/675 (4%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
+G+ IR+ +L F+ +GHK+LPSASL+P DP++L T AGM+ FKP F G + R
Sbjct: 2 TGNEIRESYLKFFEKKGHKILPSASLIPLNDPSILWTAAGMVPFKPFFTGAAKPEYTRVT 61
Query: 108 TSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
T Q+CIRT D+E+VG+T+RHHTFFEMLGNFSFGDYFK+ AI WAWEF T LPA++LW
Sbjct: 62 TCQKCIRTPDIESVGKTARHHTFFEMLGNFSFGDYFKESAIPWAWEFVTEHLRLPADKLW 121
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCS 227
IS++ DDDEAFEIWNK VGVP I RMG D NFW G GPCGPCSEIY D +RGC
Sbjct: 122 ISIFLDDDEAFEIWNKTVGVPAGRIVRMGKDTNFWEIG-VGPCGPCSEIYVDLGAERGCG 180
Query: 228 --DVDLGDDT-RFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNY 284
+ +G D RF+E +NLVF+Q+ K ++G+ PL K IDTG GLER+A ++Q VP N+
Sbjct: 181 SPECKVGCDCDRFLEIWNLVFIQFFKDEEGNYTPLTSKGIDTGFGLERVASVMQGVPTNF 240
Query: 285 ETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVV 344
+TDL I+ + L + Y + R ++ LK+I DH RAI + ++DG PSN GRGYV+
Sbjct: 241 DTDLFREIMDFTAGLFGLKYG-VDGRVDVALKVIADHCRAITFAVADGALPSNEGRGYVI 299
Query: 345 RRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKR 404
RRL+RRAVR GRLLGI E FL ++ + + ++ + + + ++R
Sbjct: 300 RRLLRRAVRFGRLLGI--------EDPFLHEVSGAVVRQMGRVYPELVTQREHVFRVIRR 351
Query: 405 EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAE 464
EE RF +TL +G ++L++++A+A R++GS +SG+DAF LYDT+GFP+E+T+E+A
Sbjct: 352 EEERFGETLAQGTEMLNRLIAEA----RQAGSAV-VSGEDAFRLYDTYGFPLELTQEMAG 406
Query: 465 EHGVSVDMKGFDIEMENQRRQSQAAHNAVK-LSVDDSA--DLAEKIPDTEFLGYDTLSAK 521
E G++VD GF ME QR+++++A +S D+ + E++ +T F+GYD L A
Sbjct: 407 EQGLTVDTDGFGRAMEEQRQRARSARQETDYISGRDAMFKKMREEVGETVFVGYDALEAT 466
Query: 522 AIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEV 581
V ++ GK + G +VE +L+ TPFYAESGGQ+ D G VT + VE+
Sbjct: 467 GRVLRIVQGGKRLESAQAGEEVEFILDVTPFYAESGGQVSDRG--KVTAADLE----VEI 520
Query: 582 KDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQ 641
+V K + ++FVH+G + G+L+ V A VDP R +H+ATHLL ALK+V+G
Sbjct: 521 HEVTKPVENLFVHRGKVVAGILKEHDTVTARVDPARRAATCRNHSATHLLHKALKEVLGG 580
Query: 642 ETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAG 701
+QAGSLV +RLRFDF + EL+++E L+N + A ++ +L +A++ G
Sbjct: 581 HVNQAGSLVEPERLRFDFTHYAAATPEELQKVEELVNRMVLSALPVEAFETSLAEARKMG 640
Query: 702 AIAMFGEKYGEQVKI 716
A A+FGEKYGE+V++
Sbjct: 641 AAALFGEKYGERVRV 655
>gi|414154586|ref|ZP_11410904.1| Alanine--tRNA ligase [Desulfotomaculum hydrothermale Lam5 = DSM
18033]
gi|411453983|emb|CCO08808.1| Alanine--tRNA ligase [Desulfotomaculum hydrothermale Lam5 = DSM
18033]
Length = 877
Score = 600 bits (1546), Expect = e-168, Method: Compositional matrix adjust.
Identities = 311/679 (45%), Positives = 428/679 (63%), Gaps = 36/679 (5%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
+G IR+++L F+ RGH++LPSASL+P DP++L T AGM+ FKP F G+ + R
Sbjct: 2 TGKEIREKYLKFFQERGHQILPSASLIPHNDPSILWTAAGMVPFKPFFTGQAVPEYKRVT 61
Query: 108 TSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
T Q+CIRT D+E+VGRT+RHHTFFEMLGNFSFGDYFK+ AI WAWEF T LP +LW
Sbjct: 62 TCQKCIRTPDIESVGRTARHHTFFEMLGNFSFGDYFKESAIPWAWEFVTEHLKLPKEKLW 121
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCS 227
I++Y DDDEAFEIW+K VGVP E I RMG D NFW G GPCGPCSEIY D RGC
Sbjct: 122 ITIYLDDDEAFEIWHKVVGVPAERIVRMGKDTNFWEIG-VGPCGPCSEIYVDLGEARGCG 180
Query: 228 DVDLG---DDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNY 284
D G D RF+E +NLVF+Q+ + ++G+ PLK K IDTG+GLER+A +LQ V +N+
Sbjct: 181 SPDCGVGCDCDRFLEIWNLVFIQFFRDEEGNYTPLKNKGIDTGMGLERVASVLQGVLSNF 240
Query: 285 ETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVV 344
+TDL I+ ++LA Y Q + + +L LK+I DH RA+ + +SDG P N GRGYV+
Sbjct: 241 DTDLFREIMDYTADLAGQKYGQ-DPKIDLALKVIADHCRAVTFAVSDGALPGNEGRGYVI 299
Query: 345 RRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKR 404
RRL+RRAVR GR+LG+ FL +A I +++ + + +L ++
Sbjct: 300 RRLLRRAVRFGRVLGV--------HEPFLYKVARAVINQMKDAYPELQPKSEHVLRVIRT 351
Query: 405 EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAE 464
EE RF++TL G +L ++ +A ++ V ++G+DAF LYDTFGFP+E+T+E+A
Sbjct: 352 EEERFLETLAAGSDILSALIQEA-----KAAGVSEITGEDAFKLYDTFGFPLELTQEIAA 406
Query: 465 EHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSA---DLAEKIPDTEFLGYDTLSAK 521
E G++VD GF ME QR+++++A + + L E++ +T F+GY TL A
Sbjct: 407 EQGLTVDTDGFAAAMEEQRQRARSARQETEYLSERGVLYKALREELGETRFIGYSTLEAA 466
Query: 522 AIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEV 581
V +LL +G I G +VE++L+ TP YAESGGQ+ DY L +G + A+
Sbjct: 467 TNVLALLKDGLQEISADAGEEVEIVLDVTPCYAESGGQVADYAVL---KGPQVEVAIT-- 521
Query: 582 KDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQ 641
V K + +F+H+G + G L ++ VD RQ +H+ATHLL ALK+V+G
Sbjct: 522 -SVSKPVEGLFIHRGKVLAGTLRRHDSLKVFVDRTRRQDTARNHSATHLLHKALKEVLGD 580
Query: 642 ETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKV----MALDDA 697
+QAGSLV DRLRFDF + + EL+ IE L+N DA L V +L A
Sbjct: 581 HVNQAGSLVEPDRLRFDFTHYAAVTPEELQRIENLVN----DAVLANLSVEVFETSLAKA 636
Query: 698 KRAGAIAMFGEKYGEQVKI 716
K GA A+FGEKYG QV++
Sbjct: 637 KEMGAAALFGEKYGRQVRV 655
>gi|378775532|ref|YP_005177775.1| alanyl-tRNA synthase [Pasteurella multocida 36950]
gi|356598080|gb|AET16806.1| alanyl-tRNA synthase [Pasteurella multocida 36950]
Length = 874
Score = 599 bits (1545), Expect = e-168, Method: Compositional matrix adjust.
Identities = 322/680 (47%), Positives = 434/680 (63%), Gaps = 48/680 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ ++GH+++ S++LVPE DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 7 IRQSFLDFFHTKGHQIVASSALVPENDPTLLFTNAGMNQFKDVFLGMDKRPYSRATTAQR 66
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFKK+AI + WE+ T GLPA +
Sbjct: 67 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKKDAIHFGWEYLTSPRWLGLPAEK 126
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA++IWNKEVGVP E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 127 LWVTVYETDDEAYDIWNKEVGVPAERIIRIGDNKGAPYASDNFWAMGDTGPCGPCTEIFY 186
Query: 219 DF--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARI 276
D H G D R+IE +N+VFMQ+N+ DG++EPL + ++DTG+GLERI+ +
Sbjct: 187 DHGEHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRHADGTMEPLPKPSVDTGMGLERISAV 246
Query: 277 LQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPS 336
LQ V +NYE D+ +I K +EL D +N +L++I DH+R+ YL++DGV PS
Sbjct: 247 LQHVNSNYEIDIFQKLIAKVAELTG-----EKDLSNKSLRVIADHIRSCAYLIADGVIPS 301
Query: 337 NIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQ 396
N GRGYV+RR+IRRAVR G LLG K AF + I++ VK ++
Sbjct: 302 NEGRGYVLRRIIRRAVRHGNLLGAKE--------AFFYKLVPTLIDVMAEAGIGVKEKQA 353
Query: 397 RILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPV 456
+ + L+ EE +F +TLERG LLD+ LA+ + LSG+ AF LYDT+GFP+
Sbjct: 354 TVEKLLRLEEEQFARTLERGLALLDEALANVKN--------GELSGEVAFKLYDTYGFPL 405
Query: 457 EITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYD 516
++T +V E +++D GFD EME QR ++Q+A D ++ T F GY
Sbjct: 406 DLTADVCRERNITIDEVGFDREMEAQRLRAQSASQFGM----DYNNVIRVEGCTTFEGYT 461
Query: 517 TLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQT 576
+ A V +L +GKPV ++ G V+L TPFYAESGGQIGD G+L N Q
Sbjct: 462 ASESLAKVTALFADGKPVERIEAGQSAVVILENTPFYAESGGQIGDSGYL------NGQG 515
Query: 577 AVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALK 636
EVKD +K G VF H G + G L VG+ V A+VD K R ++H+ATHLL AAL+
Sbjct: 516 FSFEVKDTQK-YGQVFGHIGELVSGSLTVGKSVNAVVDVKRRHNTSLNHSATHLLHAALR 574
Query: 637 KVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDD 696
+V+G+ Q GSLV+ LRFDF H + +L EIE L+N I +L+QT++M L+
Sbjct: 575 QVLGEHVVQKGSLVSDVALRFDFAHHEAITKAQLVEIECLVNQQIRANHLIQTELMELEA 634
Query: 697 AKRAGAIAMFGEKYGEQVKI 716
AK GA+A+FGEKY +QV++
Sbjct: 635 AKAKGAMALFGEKYADQVRV 654
>gi|421264033|ref|ZP_15715041.1| alanyl-tRNA synthetase [Pasteurella multocida subsp. multocida str.
P52VAC]
gi|425063982|ref|ZP_18467107.1| Alanyl-tRNA synthetase [Pasteurella multocida subsp. gallicida X73]
gi|401688789|gb|EJS84336.1| alanyl-tRNA synthetase [Pasteurella multocida subsp. multocida str.
P52VAC]
gi|404381950|gb|EJZ78414.1| Alanyl-tRNA synthetase [Pasteurella multocida subsp. gallicida X73]
Length = 874
Score = 599 bits (1545), Expect = e-168, Method: Compositional matrix adjust.
Identities = 322/680 (47%), Positives = 434/680 (63%), Gaps = 48/680 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ ++GH+++ S++LVPE DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 7 IRQSFLDFFHTKGHQIVASSALVPENDPTLLFTNAGMNQFKDVFLGMDKRPYSRATTAQR 66
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFKK+AI + WE+ T GLPA +
Sbjct: 67 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKKDAIHFGWEYLTSPRWLGLPAEK 126
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA++IWNKEVGVP E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 127 LWVTVYETDDEAYDIWNKEVGVPAERIIRIGDNKGAPYASDNFWAMGDTGPCGPCTEIFY 186
Query: 219 DF--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARI 276
D H G D R+IE +N+VFMQ+N+ DG++EPL + ++DTG+GLERI+ +
Sbjct: 187 DHGEHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRHADGTMEPLPKPSVDTGMGLERISAV 246
Query: 277 LQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPS 336
LQ V +NYE D+ +I K +EL D +N +L++I DH+R+ YL++DGV PS
Sbjct: 247 LQHVNSNYEIDIFQKLIAKVAELTG-----EKDLSNKSLRVIADHIRSCAYLIADGVIPS 301
Query: 337 NIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQ 396
N GRGYV+RR+IRRAVR G LLG K AF + I++ VK ++
Sbjct: 302 NEGRGYVLRRIIRRAVRHGNLLGAKE--------AFFYKLVPTLIDVMAEAGIGVKEKQA 353
Query: 397 RILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPV 456
+ + L+ EE +F +TLERG LLD+ LA+ + LSG+ AF LYDT+GFP+
Sbjct: 354 TVEKLLRLEEEQFARTLERGLALLDEALANVKN--------GELSGEVAFKLYDTYGFPL 405
Query: 457 EITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYD 516
++T +V E +++D GFD EME QR ++Q+A D ++ T F GY
Sbjct: 406 DLTADVCRERNITIDEVGFDREMEAQRLRAQSASQFGM----DYNNVIRVEGCTTFEGYT 461
Query: 517 TLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQT 576
+ A V +L +GKPV ++ G V+L TPFYAESGGQIGD G+L N Q
Sbjct: 462 ASESLAKVTALFADGKPVERIEAGQSAVVILENTPFYAESGGQIGDSGYL------NGQG 515
Query: 577 AVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALK 636
EVKD +K G VF H G + G L VG+ V A+VD K R ++H+ATHLL AAL+
Sbjct: 516 FSFEVKDTQK-YGQVFGHIGELVSGSLTVGKSVNAVVDVKRRHNTSLNHSATHLLHAALR 574
Query: 637 KVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDD 696
+V+G+ Q GSLV+ LRFDF H + +L EIE L+N I +L+QT++M L+
Sbjct: 575 QVLGEHVVQKGSLVSDVALRFDFAHHEAITKAQLVEIECLVNQQIRANHLIQTELMELEA 634
Query: 697 AKRAGAIAMFGEKYGEQVKI 716
AK GA+A+FGEKY +QV++
Sbjct: 635 AKAKGAMALFGEKYADQVRV 654
>gi|386835710|ref|YP_006241030.1| alanyl-tRNA synthetase [Pasteurella multocida subsp. multocida str.
3480]
gi|385202416|gb|AFI47271.1| alanyl-tRNA synthetase [Pasteurella multocida subsp. multocida str.
3480]
Length = 874
Score = 599 bits (1545), Expect = e-168, Method: Compositional matrix adjust.
Identities = 322/680 (47%), Positives = 434/680 (63%), Gaps = 48/680 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ ++GH+++ S++LVPE DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 7 IRQSFLDFFHTKGHQIVASSALVPENDPTLLFTNAGMNQFKDVFLGMDKRPYSRATTAQR 66
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFKK+AI + WE+ T GLPA +
Sbjct: 67 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKKDAIHFGWEYLTSPRWLGLPAEK 126
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA++IWNKEVGVP E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 127 LWVTVYETDDEAYDIWNKEVGVPAERIIRIGDNKGAPYASDNFWAMGDTGPCGPCTEIFY 186
Query: 219 DF--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARI 276
D H G D R+IE +N+VFMQ+N+ DG++EPL + ++DTG+GLERI+ +
Sbjct: 187 DHGEHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRHADGTMEPLPKPSVDTGMGLERISAV 246
Query: 277 LQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPS 336
LQ V +NYE D+ +I K +EL D +N +L++I DH+R+ YL++DGV PS
Sbjct: 247 LQHVNSNYEIDIFQKLIAKVAELTG-----EKDLSNKSLRVIADHIRSCAYLIADGVIPS 301
Query: 337 NIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQ 396
N GRGYV+RR+IRRAVR G LLG K AF + I++ VK ++
Sbjct: 302 NEGRGYVLRRIIRRAVRHGNLLGAKE--------AFFYKLVPTLIDVMAEAGIGVKEKQA 353
Query: 397 RILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPV 456
+ + L+ EE +F +TLERG LLD+ LA+ + LSG+ AF LYDT+GFP+
Sbjct: 354 TVEKLLRLEEEQFARTLERGLALLDEALANVKN--------GELSGEVAFKLYDTYGFPL 405
Query: 457 EITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYD 516
++T +V E +++D GFD EME QR ++Q+A D ++ T F GY
Sbjct: 406 DLTADVCRERNITIDEVGFDREMEAQRLRAQSASQFGM----DYNNVIRVEGCTTFEGYT 461
Query: 517 TLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQT 576
+ A V +L +GKPV ++ G V+L TPFYAESGGQIGD G+L N Q
Sbjct: 462 ASESLAKVTALFADGKPVERIEAGQSAVVILENTPFYAESGGQIGDSGYL------NGQG 515
Query: 577 AVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALK 636
EVKD +K G VF H G + G L VG+ V A+VD K R ++H+ATHLL AAL+
Sbjct: 516 FSFEVKDTQK-YGQVFGHIGELVSGSLTVGKSVNAVVDVKRRHNTSLNHSATHLLHAALR 574
Query: 637 KVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDD 696
+V+G+ Q GSLV+ LRFDF H + +L EIE L+N I +L+QT++M L+
Sbjct: 575 QVLGEHVVQKGSLVSDVALRFDFAHHEAITKAQLVEIECLVNQQIRANHLIQTELMELEA 634
Query: 697 AKRAGAIAMFGEKYGEQVKI 716
AK GA+A+FGEKY +QV++
Sbjct: 635 AKAKGAMALFGEKYADQVRV 654
>gi|134298636|ref|YP_001112132.1| alanyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
gi|205830077|sp|A4J2K4.1|SYA_DESRM RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|134051336|gb|ABO49307.1| alanyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
Length = 878
Score = 599 bits (1545), Expect = e-168, Method: Compositional matrix adjust.
Identities = 304/675 (45%), Positives = 438/675 (64%), Gaps = 28/675 (4%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
+G IR+++L F+ RGH++LPSASL+P DP++L T AGM+ FKP F G+ + R
Sbjct: 3 TGKEIREKYLRFFEQRGHQILPSASLIPHNDPSILWTAAGMVPFKPFFTGQAVPEYQRVT 62
Query: 108 TSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
T Q+CIRT D+E+VGRT+RHHTFFEMLGNFSFGDYFK+ I WAWEF T E LP +LW
Sbjct: 63 TCQKCIRTPDIESVGRTARHHTFFEMLGNFSFGDYFKESIIPWAWEFITKELNLPKEKLW 122
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCS 227
I++Y+DDDEAFEIWNK VG+P E I R+G D NFW G GPCGPCSEIY D RGC
Sbjct: 123 ITIYQDDDEAFEIWNKVVGIPSERIVRLGKDTNFWEIG-VGPCGPCSEIYVDLGEARGCG 181
Query: 228 --DVDLGDDT-RFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNY 284
+ +G D RF+E +NLVF+Q+ + ++G+ PL+ K IDTG+GLER+A +LQ V +N+
Sbjct: 182 SPECQVGCDCDRFLEIWNLVFIQFFRDEEGNYSPLENKGIDTGMGLERVASVLQGVASNF 241
Query: 285 ETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVV 344
+TD+ I+ + LA Y Q D +L LK+I DH RA+ + +SDG P N GRGYV+
Sbjct: 242 DTDIFREIMDFTANLAGQEYGQKAD-IDLALKVIADHCRAVTFAVSDGALPGNEGRGYVI 300
Query: 345 RRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKR 404
RRL+RRAVR GR+LG++ FL +A+ I+ ++K + + +L ++
Sbjct: 301 RRLLRRAVRFGRVLGVR--------EPFLYKVAQAVIKQMQDAYPELKQKAEHVLRVIRT 352
Query: 405 EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAE 464
EE RF++TL G +L ++ +A + SG+ ++G DAF LYDTFGFP+E+T+E+AE
Sbjct: 353 EEERFLETLAAGSDILSALINEA----KASGA-SEITGDDAFKLYDTFGFPLELTQEIAE 407
Query: 465 EHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSA---DLAEKIPDTEFLGYDTLSAK 521
E G++VD++ F+ ME QR+++++A + + L E++ +T F+GY L A
Sbjct: 408 EQGLAVDVEVFNAAMEEQRKRARSARQETEYLSERGVLYKALREELGETRFIGYSALEAD 467
Query: 522 AIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEV 581
+ + +LL +G I G +VE++L+ TP YAESGGQ+ D+ L +G + + VE+
Sbjct: 468 SNIMALLKDGMQEISAVAGEEVEIVLDVTPCYAESGGQVADHAIL---RGPDLE---VEI 521
Query: 582 KDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQ 641
V K + + +H+G + G+++ V+AIVD RQ +H+ATHLL ALK+V+G
Sbjct: 522 TSVNKPVEGLVIHRGKVLSGIIKRHDSVKAIVDQPRRQDTARNHSATHLLHKALKEVLGD 581
Query: 642 ETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAG 701
+QAGSLV DRLRFDF + + EL IE ++N + ++ +L AK G
Sbjct: 582 HVNQAGSLVEPDRLRFDFTHYAAVTSEELRRIEEIVNEAVLSNLSIEVFETSLSKAKEMG 641
Query: 702 AIAMFGEKYGEQVKI 716
A A+FGEKYG+QV++
Sbjct: 642 AAALFGEKYGKQVRV 656
>gi|15603152|ref|NP_246224.1| alanyl-tRNA synthetase [Pasteurella multocida subsp. multocida str.
Pm70]
gi|13431888|sp|P57933.1|SYA_PASMU RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|12721647|gb|AAK03371.1| AlaS [Pasteurella multocida subsp. multocida str. Pm70]
Length = 874
Score = 599 bits (1544), Expect = e-168, Method: Compositional matrix adjust.
Identities = 322/680 (47%), Positives = 433/680 (63%), Gaps = 48/680 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ ++GH+++ S++LVPE DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 7 IRQSFLDFFHTKGHQIVASSALVPENDPTLLFTNAGMNQFKDVFLGMDKRPYSRATTAQR 66
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFKK+AI + WE+ T GLPA +
Sbjct: 67 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKKDAIHFGWEYLTSPRWLGLPAEK 126
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA++IWNKEVGVP E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 127 LWVTVYETDDEAYDIWNKEVGVPAERIIRIGDNKGAPYASDNFWAMGDTGPCGPCTEIFY 186
Query: 219 DF--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARI 276
D H G D R+IE +N+VFMQ+N+ DG++EPL + ++DTG+GLERI+ +
Sbjct: 187 DHGEHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRHADGTMEPLPKPSVDTGMGLERISAV 246
Query: 277 LQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPS 336
LQ V +NYE D+ +I K +EL D +N +L++I DH+R+ YL++DGV PS
Sbjct: 247 LQHVNSNYEIDIFQKLIAKVAELTG-----EKDLSNKSLRVIADHIRSCAYLIADGVIPS 301
Query: 337 NIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQ 396
N GRGYV+RR+IRRAVR G LLG K AF + I++ VK ++
Sbjct: 302 NEGRGYVLRRIIRRAVRHGNLLGAKE--------AFFYKLVPTLIDVMAEAGIGVKEKQA 353
Query: 397 RILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPV 456
+ + L+ EE +F +TLERG LLD+ LA+ LSG+ AF LYDT+GFP+
Sbjct: 354 TVEKLLRLEEEQFARTLERGLALLDEALANV--------KKGELSGEVAFKLYDTYGFPL 405
Query: 457 EITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYD 516
++T +V E +++D GFD EME QR ++Q+A D ++ T F GY
Sbjct: 406 DLTADVCRERNITIDEVGFDREMEAQRLRAQSASQFGM----DYNNVIRVEGCTTFEGYT 461
Query: 517 TLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQT 576
+ A V +L +GKPV ++ G V+L TPFYAESGGQIGD G+L N Q
Sbjct: 462 ASESLAKVTALFADGKPVERIEAGQSAVVILENTPFYAESGGQIGDSGYL------NGQG 515
Query: 577 AVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALK 636
EVKD +K G VF H G + G L VG+ V A+VD K R ++H+ATHLL AAL+
Sbjct: 516 FSFEVKDTQK-YGQVFGHIGELVSGSLTVGKSVNAVVDVKRRHNTSLNHSATHLLHAALR 574
Query: 637 KVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDD 696
+V+G+ Q GSLV+ LRFDF H + +L EIE L+N I +L+QT++M L+
Sbjct: 575 QVLGEHVVQKGSLVSDVALRFDFAHHEAITKAQLVEIECLVNQQIRANHLIQTELMELEA 634
Query: 697 AKRAGAIAMFGEKYGEQVKI 716
AK GA+A+FGEKY +QV++
Sbjct: 635 AKAKGAMALFGEKYADQVRV 654
>gi|425066150|ref|ZP_18469270.1| Alanyl-tRNA synthetase [Pasteurella multocida subsp. gallicida
P1059]
gi|404382077|gb|EJZ78539.1| Alanyl-tRNA synthetase [Pasteurella multocida subsp. gallicida
P1059]
Length = 874
Score = 598 bits (1543), Expect = e-168, Method: Compositional matrix adjust.
Identities = 322/680 (47%), Positives = 433/680 (63%), Gaps = 48/680 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ ++GH+++ S++LVPE DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 7 IRQSFLDFFHTKGHQIVASSALVPENDPTLLFTNAGMNQFKDVFLGMDKRPYSRATTAQR 66
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFKK+AI + WE+ T GLPA +
Sbjct: 67 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKKDAIHFGWEYLTSPRWLGLPAEK 126
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA++IWNKEVGVP E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 127 LWVTVYETDDEAYDIWNKEVGVPAERIIRIGDNKGAPYASDNFWAMGDTGPCGPCTEIFY 186
Query: 219 DF--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARI 276
D H G D R+IE +N+VFMQ+N+ DG++EPL + ++DTG+GLERI+ +
Sbjct: 187 DHGEHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRHADGTMEPLPKPSVDTGMGLERISAV 246
Query: 277 LQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPS 336
LQ V +NYE D+ +I K +EL D +N +L++I DH+R+ YL++DGV PS
Sbjct: 247 LQHVNSNYEIDIFQKLIAKVAELTG-----EKDLSNKSLRVIADHIRSCAYLIADGVIPS 301
Query: 337 NIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQ 396
N GRGYV+RR+IRRAVR G LLG K AF + I++ VK ++
Sbjct: 302 NEGRGYVLRRIIRRAVRHGNLLGAKE--------AFFYKLVPTLIDVMAEAGIGVKEKQA 353
Query: 397 RILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPV 456
+ + L+ EE +F +TLERG LLD+ LA+ + LSG+ AF LYDT+GFP+
Sbjct: 354 TVEKLLRLEEEQFARTLERGLALLDEALANVKN--------GELSGEVAFKLYDTYGFPL 405
Query: 457 EITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYD 516
++T +V E + +D GFD EME QR ++Q+A D ++ T F GY
Sbjct: 406 DLTADVCRERNIMIDEVGFDREMEAQRLRAQSASQFGM----DYNNVIRVEGCTTFEGYT 461
Query: 517 TLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQT 576
+ A V +L +GKPV ++ G V+L TPFYAESGGQIGD G+L N Q
Sbjct: 462 ASESLAKVTALFADGKPVERIEAGQSAVVILENTPFYAESGGQIGDSGYL------NGQG 515
Query: 577 AVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALK 636
EVKD +K G VF H G + G L VG+ V A+VD K R ++H+ATHLL AAL+
Sbjct: 516 FSFEVKDTQK-YGQVFGHIGELVSGSLTVGKSVNAVVDVKRRHNTSLNHSATHLLHAALR 574
Query: 637 KVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDD 696
+V+G+ Q GSLV+ LRFDF H + +L EIE L+N I +L+QT++M L+
Sbjct: 575 QVLGEHVVQKGSLVSDVALRFDFAHHEAITKAQLVEIECLVNQQIRANHLIQTELMELEA 634
Query: 697 AKRAGAIAMFGEKYGEQVKI 716
AK GA+A+FGEKY +QV++
Sbjct: 635 AKAKGAMALFGEKYADQVRV 654
>gi|417854076|ref|ZP_12499402.1| alanyl-tRNA synthetase [Pasteurella multocida subsp. multocida str.
Anand1_goat]
gi|338218534|gb|EGP04297.1| alanyl-tRNA synthetase [Pasteurella multocida subsp. multocida str.
Anand1_goat]
Length = 874
Score = 597 bits (1539), Expect = e-168, Method: Compositional matrix adjust.
Identities = 321/680 (47%), Positives = 433/680 (63%), Gaps = 48/680 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ ++GH+++ S++LVPE DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 7 IRQSFLDFFHTKGHQIVASSALVPENDPTLLFTNAGMNQFKDVFLGMDKRPYSRATTAQR 66
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFKK+AI + WE+ T GLPA +
Sbjct: 67 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKKDAIHFGWEYLTSPRWLGLPAEK 126
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA++IWNKEVGVP E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 127 LWVTVYETDDEAYDIWNKEVGVPAERIIRIGDNKGAPYASDNFWAMGDTGPCGPCTEIFY 186
Query: 219 DF--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARI 276
D H G D R+IE +N+VFMQ+N+ DG++EPL + ++DTG+GLERI+ +
Sbjct: 187 DHGEHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRHADGTMEPLPKPSVDTGMGLERISAV 246
Query: 277 LQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPS 336
LQ V +NYE D+ +I K +EL D +N +L++I DH+R+ YL++DGV PS
Sbjct: 247 LQHVNSNYEIDIFQKLIAKVAELTG-----EKDLSNKSLRVIADHIRSCAYLIADGVIPS 301
Query: 337 NIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQ 396
N GRGYV+RR+IRRAVR G LLG K AF + I++ VK ++
Sbjct: 302 NEGRGYVLRRIIRRAVRHGNLLGAKE--------AFFYKLVPTLIDVMAEAGIGVKEKQA 353
Query: 397 RILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPV 456
+ + L+ EE +F +TLERG LLD+ LA+ + LSG+ AF LYDT+GFP+
Sbjct: 354 TVEKLLRLEEEQFARTLERGLALLDEALANVKN--------GELSGEVAFKLYDTYGFPL 405
Query: 457 EITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYD 516
++T +V E +++D GFD EME QR ++Q+A D ++ T F GY
Sbjct: 406 DLTADVCRERNITIDEVGFDREMEAQRLRAQSASQFGM----DYNNVIRVEGCTTFEGYT 461
Query: 517 TLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQT 576
+ A V +L +GKPV ++ G V+L TPFYAESGGQIGD G+L Q
Sbjct: 462 ASESLAKVTALFADGKPVERIEAGQSAVVILENTPFYAESGGQIGDSGYL------KGQG 515
Query: 577 AVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALK 636
EVKD +K G VF H G + G L VG+ V A+VD K R ++H+ATHLL AAL+
Sbjct: 516 FSFEVKDTQK-YGQVFGHIGELVSGSLTVGKSVNAVVDVKRRHNTSLNHSATHLLHAALR 574
Query: 637 KVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDD 696
+V+G+ Q GSLV+ LRFDF H + +L EIE L+N I +L+QT++M L+
Sbjct: 575 QVLGEHVVQKGSLVSDVALRFDFAHHEAITKAQLVEIECLVNQQIRANHLIQTELMELEA 634
Query: 697 AKRAGAIAMFGEKYGEQVKI 716
AK GA+A+FGEKY +QV++
Sbjct: 635 AKAKGAMALFGEKYADQVRV 654
>gi|392426680|ref|YP_006467674.1| alanyl-tRNA synthetase [Desulfosporosinus acidiphilus SJ4]
gi|391356643|gb|AFM42342.1| alanyl-tRNA synthetase [Desulfosporosinus acidiphilus SJ4]
Length = 876
Score = 597 bits (1539), Expect = e-168, Method: Compositional matrix adjust.
Identities = 313/675 (46%), Positives = 432/675 (64%), Gaps = 30/675 (4%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
+G+ +R F F+ RGHK+LPSASL+P +DPT+LLT+AGM+ FKP F +V PRA
Sbjct: 3 TGNELRDMFRKFFEERGHKILPSASLIPKDDPTLLLTVAGMVPFKPYFQRRVEPPFPRAT 62
Query: 108 TSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
T+Q+C+RT D+E VG+T+RHHT+FEMLGNFSFGDYFKKE I WAWE+ T +PA +LW
Sbjct: 63 TAQKCVRTPDLEEVGKTARHHTYFEMLGNFSFGDYFKKEVIPWAWEYVTQVLKIPAEKLW 122
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCS 227
I+VY +DDEA ++W ++ GV E I +G +NFW +G TGPCGPCSEIY D RGC
Sbjct: 123 ITVYPEDDEARQLWIEKAGVKPERI--IGDPENFWAAGPTGPCGPCSEIYVDLGETRGCG 180
Query: 228 --DVDLGDDT-RFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNY 284
+ +G D RF+E +NLVFMQYN+ + G L PL ++NIDTG+GLERIA ++Q V N+
Sbjct: 181 RPECAVGCDCDRFLEIWNLVFMQYNRDEAGVLTPLPKQNIDTGMGLERIASVMQGVETNF 240
Query: 285 ETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVV 344
+TDL PII ++LA + Y + N + +L LK++ DH+RAI ++L+DG+ P+N GRGYV+
Sbjct: 241 DTDLFRPIIDFVADLAGIKY-KENPKNDLALKVVADHVRAISFMLADGIRPNNEGRGYVL 299
Query: 345 RRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKR 404
RR++RRAVR +LLGI + FL S+ ++K E I+ L
Sbjct: 300 RRILRRAVRYAKLLGI--------DKPFLESVFRIIQRDYAQAYPELKDNENFIINHLNL 351
Query: 405 EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAE 464
EE F TL++G QML + + E G L G DAF LY+T+GFPVE+T+E+
Sbjct: 352 EEKNFQATLDQG----TQMLQEKVRELVEKGETV-LGGSDAFYLYETYGFPVELTEEILA 406
Query: 465 EHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADL---AEKIPDTEFLGYDTLSAK 521
E G+SVDM F E R++++ ++ + +SADL A+ + T FLGY +S +
Sbjct: 407 EQGLSVDMPSFQASAEEHRQRAKEQSQQMRAAA-ESADLIQRAKALGVTPFLGYHQVSCE 465
Query: 522 AIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEV 581
A +E L V+G +G +V + L+ TPFYAESGGQ+ D G L + A V
Sbjct: 466 AKIEGLFVDGDERQDAGEGEEVTIFLSETPFYAESGGQVSDEGVLRTPR------AEARV 519
Query: 582 KDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQ 641
+VKK + F H+ I GVL +G VEA+V R HH+ATHLLQAAL+ V+G+
Sbjct: 520 LEVKKGVTGTFYHRIQILTGVLHLGETVEAVVKTSARSATARHHSATHLLQAALRSVLGE 579
Query: 642 ETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAG 701
QAGSLV +RLRFDF PL ++L+ +E LIN I + M+LD+AK++G
Sbjct: 580 HVQQAGSLVTPERLRFDFTHFSPLTPSDLKAVEGLINEAILKNMNVDATEMSLDEAKKSG 639
Query: 702 AIAMFGEKYGEQVKI 716
A A+FGEKYG+ V++
Sbjct: 640 ATALFGEKYGDTVRV 654
>gi|383311539|ref|YP_005364349.1| alanyl-tRNA synthetase [Pasteurella multocida subsp. multocida str.
HN06]
gi|380872811|gb|AFF25178.1| alanyl-tRNA synthetase [Pasteurella multocida subsp. multocida str.
HN06]
Length = 874
Score = 597 bits (1538), Expect = e-168, Method: Compositional matrix adjust.
Identities = 321/680 (47%), Positives = 433/680 (63%), Gaps = 48/680 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ ++GH+++ S++LVPE DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 7 IRQSFLDFFHTKGHQIVASSALVPENDPTLLFTNAGMNQFKDVFLGMDKRPYSRATTAQR 66
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFKK+AI + WE+ T GLPA +
Sbjct: 67 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKKDAIHFGWEYLTSPRWLGLPAEK 126
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA++IWNKEVGV E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 127 LWVTVYETDDEAYDIWNKEVGVSAERIIRIGDNKGAPYASDNFWAMGDTGPCGPCTEIFY 186
Query: 219 DF--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARI 276
D H G D R+IE +N+VFMQ+N+ DG++EPL + ++DTG+GLERI+ +
Sbjct: 187 DHGEHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRHADGTMEPLPKPSVDTGMGLERISAV 246
Query: 277 LQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPS 336
LQ V +NYE D+ +I K +EL D +N +L++I DH+R+ YL++DGV PS
Sbjct: 247 LQHVNSNYEIDIFQKLIAKVAELTG-----EKDLSNKSLRVIADHIRSCAYLIADGVIPS 301
Query: 337 NIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQ 396
N GRGYV+RR+IRRAVR G LLG K AF + I++ VK ++
Sbjct: 302 NEGRGYVLRRIIRRAVRHGNLLGAKE--------AFFYKLVPTLIDVMAEAGIGVKEKQA 353
Query: 397 RILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPV 456
+ + L+ EE +F +TLERG LLD+ LA+ + LSG+ AF LYDT+GFP+
Sbjct: 354 TVEKLLRLEEEQFARTLERGLALLDEALANVKN--------GELSGEVAFKLYDTYGFPL 405
Query: 457 EITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYD 516
++T +V E +++D GFD EME QR ++Q+A D ++ T F GY
Sbjct: 406 DLTADVCRERNITIDEVGFDREMEAQRLRAQSASQFGM----DYNNVIRVEGCTTFEGYT 461
Query: 517 TLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQT 576
+ A V +L +GKPV ++ G V+L TPFYAESGGQIGD G+L N Q
Sbjct: 462 ASESLAKVTALFADGKPVERIEAGQSAVVILENTPFYAESGGQIGDSGYL------NGQG 515
Query: 577 AVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALK 636
EVKD +K G VF H G + G L VG+ V A+VD K R ++H+ATHLL AAL+
Sbjct: 516 FSFEVKDTQK-YGQVFGHIGELVSGSLTVGKSVNAVVDVKRRHNTSLNHSATHLLHAALR 574
Query: 637 KVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDD 696
+V+G+ Q GSLV+ LRFDF H + +L EIE L+N I +L+QT++M L+
Sbjct: 575 QVLGEHVVQKGSLVSDVALRFDFAHHEAITKAQLVEIECLVNQQIRANHLIQTELMELEA 634
Query: 697 AKRAGAIAMFGEKYGEQVKI 716
AK GA+A+FGEKY +QV++
Sbjct: 635 AKAKGAMALFGEKYADQVRV 654
>gi|332981924|ref|YP_004463365.1| alanyl-tRNA synthetase [Mahella australiensis 50-1 BON]
gi|332699602|gb|AEE96543.1| alanyl-tRNA synthetase [Mahella australiensis 50-1 BON]
Length = 883
Score = 597 bits (1538), Expect = e-167, Method: Compositional matrix adjust.
Identities = 308/675 (45%), Positives = 437/675 (64%), Gaps = 29/675 (4%)
Query: 51 DSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATS 109
D IR RFL F+ S+GH +LPS L+P+ D ++LL +GM KP F G+ R T
Sbjct: 7 DDIRDRFLHFFESKGHLILPSFPLIPKNDKSLLLINSGMAPLKPYFTGQETPPSKRVTTC 66
Query: 110 QRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWIS 169
Q+CIRT D+E VG+T+RH TFFEMLGNFSFGDYFKKEAI WAWEF T GLP +RLW+S
Sbjct: 67 QKCIRTPDIERVGKTARHGTFFEMLGNFSFGDYFKKEAIPWAWEFVTQVLGLPVDRLWVS 126
Query: 170 VYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSDV 229
+YE DDEAF+IW+ +VG+P E I RMG +DNFW G GPCGPCSE+Y+D D+GC
Sbjct: 127 IYEQDDEAFDIWHNDVGLPEERIVRMGKEDNFWEIG-VGPCGPCSELYFDRGEDKGCGKP 185
Query: 230 DLG---DDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYET 286
D G + RF+EF+NLVF Q+ + +DG+ + L+ NIDTG+GLER+A I+Q V + +E
Sbjct: 186 DCGVGCECDRFVEFWNLVFTQFYRNEDGTYDKLEHPNIDTGMGLERMAVIMQGVDSIFEI 245
Query: 287 DLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRR 346
D I I+ +E+A VSY S+D+ +++L++I DH R+ ++ DG+ PSN GRGYV+RR
Sbjct: 246 DTIGAILDYVAEIAGVSYG-SDDKNDMSLRVITDHARSAAFMAGDGILPSNEGRGYVMRR 304
Query: 347 LIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREE 406
LIRRA+R GRLLGI+ FL + ++ IE ++ R IL + EE
Sbjct: 305 LIRRAIRHGRLLGIR--------DPFLYRVTDQVIEHFKGAYPELAQRRDFILRVINMEE 356
Query: 407 LRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEH 466
RF QTL++G L+++ + R R G + L+G+DAF LYDT+GFP+++T+E+ E
Sbjct: 357 ERFDQTLDQGMLRLEEI----IERMRAQG-INTLNGEDAFKLYDTYGFPLDLTQEILSER 411
Query: 467 GVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPD---TEFLGYDTLSAKAI 523
G+ +D GF+ +M+ Q+ +++AA D D+ ++PD + F GYD L +
Sbjct: 412 GMKIDTDGFEKQMQAQKERARAARKQTNYMGSDE-DIYAELPDDVISVFTGYDRLEDDGV 470
Query: 524 VESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKD 583
V +++V+G+ +G +VE++L+RTPFYA+SGGQ+GD G+LY A EV D
Sbjct: 471 VSAIVVDGELRNVAVEGDEVEIILDRTPFYAQSGGQVGDTGWLY------GNGARAEVYD 524
Query: 584 VKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQET 643
KK+ G +H G + EG L VG +V A VD + R +HTATHLL AL+ +G
Sbjct: 525 CKKATGRRIIHLGRMVEGSLAVGDKVHATVDEERRMATARNHTATHLLHKALRDTLGAHV 584
Query: 644 SQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAI 703
QAGSLV DRLRFDF+ P+ EL+ +E +N I D + + MA+++A++ GA+
Sbjct: 585 EQAGSLVTPDRLRFDFSHFAPMTQQELDRVEYEVNKHILDDLEVTIEEMAIEEARKTGAM 644
Query: 704 AMFGEKYGEQVKISS 718
A+F EKYG++V++ S
Sbjct: 645 ALFDEKYGDKVRVVS 659
>gi|342903411|ref|ZP_08725222.1| Alanyl-tRNA synthetase [Haemophilus haemolyticus M21621]
gi|341955515|gb|EGT81971.1| Alanyl-tRNA synthetase [Haemophilus haemolyticus M21621]
Length = 874
Score = 596 bits (1537), Expect = e-167, Method: Compositional matrix adjust.
Identities = 322/681 (47%), Positives = 437/681 (64%), Gaps = 50/681 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVPE DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 7 IRQSFLDFFHSKGHQVVESSSLVPENDPTLLFTNAGMNQFKDVFLGMDKRPYSRATTAQR 66
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AI +AWE+ T GLP +
Sbjct: 67 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAINFAWEYLTSPQWLGLPKEK 126
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+ IWNKEVGVP E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 127 LWVTVYETDDEAYNIWNKEVGVPAERIIRIGDNKGAPYASDNFWAMGDTGPCGPCTEIFY 186
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N+ DG++E L + ++DTG+GLERI+
Sbjct: 187 D-HGDHIWGGPPGSPEEDGDRYIEIWNVVFMQFNRLADGTMEKLPRPSVDTGMGLERISA 245
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NYE D+ +I K +E+ + D +N +L++I DH+R+ YL++DGV P
Sbjct: 246 VLQHVNSNYEIDIFKILIAKTAEVVGTT-----DLSNKSLRVIADHIRSCAYLIADGVIP 300
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN GRGYV+RR+IRRAVR G LLG K AF + IE+ DVKA++
Sbjct: 301 SNEGRGYVLRRIIRRAVRHGHLLGAKE--------AFFYKLVPTLIEVMAEAGKDVKAKQ 352
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
+ + L+ EE +F +TLERG LLD+ LA LSG+ AF LYDT+GFP
Sbjct: 353 VNVEKLLRLEEEQFARTLERGLSLLDEALAQVKDGV--------LSGEVAFKLYDTYGFP 404
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGY 515
+++T +V E +++D + FD EME QR ++QAA + VD ++ + +T+F GY
Sbjct: 405 LDLTADVCRERNITIDEQAFDREMEAQRTRAQAAS---QFGVDYNS-IIRVDGETKFEGY 460
Query: 516 DTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
+ ++A + +L +GK V + G V+L TPFYAESGGQIGD G+L + Q
Sbjct: 461 TEVESQAKITALFYDGKSVESIEAGQSAVVILENTPFYAESGGQIGDSGYL------SAQ 514
Query: 576 TAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAAL 635
+ VKD +K G VF H G + +G L+VG+ V AIVD + R ++H+ATHLL AAL
Sbjct: 515 GVIFNVKDTQK-YGQVFGHIGELTQGSLKVGQSVNAIVDAERRHNTSLNHSATHLLHAAL 573
Query: 636 KKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALD 695
++V+GQ Q GSLV+ LRFDF + +L +IE L+N I L+QT +M +D
Sbjct: 574 RQVLGQHVVQKGSLVSDKALRFDFAQPEAITKEQLTQIETLVNQKIRANFLVQTDIMDID 633
Query: 696 DAKRAGAIAMFGEKYGEQVKI 716
AK GA+A+FGEKYG+ V++
Sbjct: 634 SAKAKGAMALFGEKYGDNVRV 654
>gi|333924402|ref|YP_004497982.1| alanyl-tRNA synthetase [Desulfotomaculum carboxydivorans CO-1-SRB]
gi|333749963|gb|AEF95070.1| alanyl-tRNA synthetase [Desulfotomaculum carboxydivorans CO-1-SRB]
Length = 877
Score = 596 bits (1537), Expect = e-167, Method: Compositional matrix adjust.
Identities = 321/676 (47%), Positives = 437/676 (64%), Gaps = 30/676 (4%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
+G IR+ FL F+ RGH++LPSASL+P DP++L T AGM+ FKP F G+ + R
Sbjct: 2 TGKEIREAFLRFFEERGHQILPSASLIPHNDPSILWTAAGMVPFKPFFTGQAVPEYKRVT 61
Query: 108 TSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
T Q+CIRT D+E+VGRT+RHHTFFEMLGNFSFGDYFK++AI WAWEF T LPA++LW
Sbjct: 62 TCQKCIRTPDIESVGRTARHHTFFEMLGNFSFGDYFKEKAIPWAWEFVTEHLKLPADKLW 121
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCS 227
I++Y DDDEAF+IW+ VGVP E I RMG D NFW G GPCGPCSEIY D RGC
Sbjct: 122 ITIYLDDDEAFDIWHNVVGVPAERIVRMGKDTNFWEIG-VGPCGPCSEIYVDLGETRGCG 180
Query: 228 DVDLG---DDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNY 284
+ G D RF+E +NLVF+Q+ + ++G+ PLK K IDTG+GLER+A +LQ+V +N+
Sbjct: 181 SPNCGVGCDCDRFLEIWNLVFIQFFRDEEGNYSPLKNKGIDTGMGLERVASVLQQVNSNF 240
Query: 285 ETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVV 344
+TDL I+ + + Y Q + R +L LK+I DH RA+ + ++DG P N GRGYV+
Sbjct: 241 DTDLFREIMDFTANMVGQKYGQ-DARVDLALKVIADHCRAVTFAVNDGALPGNEGRGYVI 299
Query: 345 RRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKR 404
RRL+RRAVR GR+LG+ FL +A I D+K R IL ++
Sbjct: 300 RRLLRRAVRFGRVLGV--------HEPFLYKVAGAVINQMATAYPDLKQRTDHILRVIRT 351
Query: 405 EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAE 464
EE RF++TL G +L ++++A R +G +SGQDAF LYDTFGFP+E+T+E+A
Sbjct: 352 EEERFLETLAAGSDILASLISEA----RAAGKT-EISGQDAFRLYDTFGFPLELTREIAS 406
Query: 465 EHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSA---DLAEKIPDTEFLGYDTLSAK 521
E G+SVD GF ME QRR++++A + + L E++ +T F+GY TL+A
Sbjct: 407 EQGLSVDEDGFTAAMEEQRRRARSARQETEYLSERGVMYKALREELGETRFVGYGTLTAD 466
Query: 522 AIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEV 581
A V +LL +G I G +VE++L+ TP YAESGGQ+ DY L G + + VE+
Sbjct: 467 ANVLALLKDGLQEISAVAGEEVEIILDVTPCYAESGGQVADYATL---TGPDLE---VEI 520
Query: 582 KDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQ 641
V K + +FVH+G + GVL+ V+ VD + RQ +H+ATHLL ALK+V+G
Sbjct: 521 YSVNKPVEGLFVHRGKVVSGVLKRHDSVKVEVDARRRQDTARNHSATHLLHKALKQVLGD 580
Query: 642 ETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANL-LQTKVMALDDAKRA 700
+QAGSLV DRLRFDF + L EL+++E L+N + ANL + +L AK
Sbjct: 581 HVNQAGSLVEPDRLRFDFTHYAALTPEELKQVEELVNQAV-LANLSVDVFETSLSKAKAM 639
Query: 701 GAIAMFGEKYGEQVKI 716
GA A+FGEKYG+QV++
Sbjct: 640 GAAALFGEKYGKQVRV 655
>gi|323702194|ref|ZP_08113861.1| alanyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
gi|323532881|gb|EGB22753.1| alanyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
Length = 877
Score = 596 bits (1536), Expect = e-167, Method: Compositional matrix adjust.
Identities = 321/676 (47%), Positives = 437/676 (64%), Gaps = 30/676 (4%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
+G IR+ FL F+ RGH++LPSASL+P DP++L T AGM+ FKP F G+ + R
Sbjct: 2 TGKEIREAFLRFFEERGHQILPSASLIPHNDPSILWTAAGMVPFKPFFTGQAVPEYKRVT 61
Query: 108 TSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
T Q+CIRT D+E+VGRT+RHHTFFEMLGNFSFGDYFK++AI WAWEF T LPA++LW
Sbjct: 62 TCQKCIRTPDIESVGRTARHHTFFEMLGNFSFGDYFKEKAIPWAWEFVTEHLKLPADKLW 121
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCS 227
I++Y DDDEAF+IW+ VGVP E I RMG D NFW G GPCGPCSEIY D RGC
Sbjct: 122 ITIYLDDDEAFDIWHNVVGVPAERIVRMGKDTNFWEIG-VGPCGPCSEIYVDLGETRGCG 180
Query: 228 DVDLG---DDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNY 284
+ G D RF+E +NLVF+Q+ + ++G+ PLK K IDTG+GLER+A +LQ+V +N+
Sbjct: 181 SPNCGVGCDCDRFLEIWNLVFIQFFRDEEGNYSPLKNKGIDTGMGLERVASVLQQVNSNF 240
Query: 285 ETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVV 344
+TDL I+ + + Y Q + R +L LK+I DH RA+ + ++DG P N GRGYV+
Sbjct: 241 DTDLFREIMDFTANMVGQKYGQ-DARVDLALKVIADHCRAVTFAVNDGALPGNEGRGYVI 299
Query: 345 RRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKR 404
RRL+RRAVR GR+LG+ FL +A I D+K R IL ++
Sbjct: 300 RRLLRRAVRFGRVLGV--------HEPFLYKVAGAVINQMAIAYPDLKQRTDHILRVIRT 351
Query: 405 EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAE 464
EE RF++TL G +L ++++A R +G +SGQDAF LYDTFGFP+E+T+E+A
Sbjct: 352 EEERFLETLAAGSDILASLISEA----RAAGKT-EISGQDAFRLYDTFGFPLELTREIAS 406
Query: 465 EHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSA---DLAEKIPDTEFLGYDTLSAK 521
E G+SVD GF ME QRR++++A + + L E++ +T F+GY TL+A
Sbjct: 407 EQGLSVDEDGFTAAMEEQRRRARSARQETEYLSERGVMYKALREELGETRFVGYGTLTAD 466
Query: 522 AIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEV 581
A V +LL +G I G +VE++L+ TP YAESGGQ+ DY L G + + VE+
Sbjct: 467 ANVLALLKDGLQEISAVAGEEVEIILDVTPCYAESGGQVADYATL---TGPDLE---VEI 520
Query: 582 KDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQ 641
V K + +FVH+G + GVL+ V+ VD + RQ +H+ATHLL ALK+V+G
Sbjct: 521 YSVNKPVEGLFVHRGKVVSGVLKRHDSVKVEVDARRRQDTARNHSATHLLHKALKQVLGD 580
Query: 642 ETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANL-LQTKVMALDDAKRA 700
+QAGSLV DRLRFDF + L EL+++E L+N + ANL + +L AK
Sbjct: 581 HVNQAGSLVEPDRLRFDFTHYAALTPEELKQVEELVNQAV-LANLSVDVFETSLSKAKAM 639
Query: 701 GAIAMFGEKYGEQVKI 716
GA A+FGEKYG+QV++
Sbjct: 640 GAAALFGEKYGKQVRV 655
>gi|334341678|ref|YP_004546658.1| alanyl-tRNA synthetase [Desulfotomaculum ruminis DSM 2154]
gi|334093032|gb|AEG61372.1| alanyl-tRNA synthetase [Desulfotomaculum ruminis DSM 2154]
Length = 877
Score = 595 bits (1535), Expect = e-167, Method: Compositional matrix adjust.
Identities = 313/676 (46%), Positives = 437/676 (64%), Gaps = 30/676 (4%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
+G +R+++L F+ RGH++LPSASL+P DP++L T AGM+ FKP F G+ +V R
Sbjct: 2 TGKELREKYLKFFEKRGHQILPSASLIPHNDPSILWTAAGMVPFKPFFTGQAVPEVKRVT 61
Query: 108 TSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
T Q+CIRT D+E+VGRT+RHHTFFEMLGNFSFGDYFK++AI WAWEF T E LP LW
Sbjct: 62 TCQKCIRTPDIESVGRTARHHTFFEMLGNFSFGDYFKEKAIPWAWEFVTEELKLPKESLW 121
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCS 227
I++Y DDDEAFEIWNK VG+P E I R+G + NFW G GPCGPCSEIY D DRGC
Sbjct: 122 ITIYLDDDEAFEIWNKVVGIPAERIVRLGKETNFWEIG-VGPCGPCSEIYVDLGEDRGCG 180
Query: 228 --DVDLGDDT-RFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNY 284
D +G D RF+E +NLVF+Q+ + ++G+ PL+ K IDTG+GLER+A +LQ V +N+
Sbjct: 181 SPDCQVGCDCDRFLEIWNLVFIQFFRDEEGNYSPLENKGIDTGMGLERVASVLQGVASNF 240
Query: 285 ETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVV 344
+TDL I+ ++LA Y QS +L LK+I DH RA+ + +SDG P N GRGYV+
Sbjct: 241 DTDLFREIMDFTADLAGQKYGQSGS-VDLALKVIADHCRAVTFAVSDGALPGNEGRGYVI 299
Query: 345 RRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKR 404
RRL+RRAVR GR+LG++ FL ++ I+ D+K R++ IL +
Sbjct: 300 RRLLRRAVRFGRVLGVR--------EPFLYKVSGAVIQQMEDAYPDLKQRKEHILRVIHT 351
Query: 405 EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAE 464
EE RF++TL G +L ++ +A + +G +SG DAF LYDTFGFP+E+T+E+AE
Sbjct: 352 EEERFMETLAAGSDILSVLINEA----KNTGK-GEISGPDAFRLYDTFGFPLELTREIAE 406
Query: 465 EHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSA---DLAEKIPDTEFLGYDTLSAK 521
E G++VD KGF ME QR+++++A + + L E++ +T F+GY TL ++
Sbjct: 407 EQGLTVDEKGFAAAMEEQRKRARSARQETEYLSERGVLYKALREELGETHFVGYGTLESE 466
Query: 522 AIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEV 581
A V +LL +G I G +VE++L+ TP YAESGGQ+ D+ L +G + A +
Sbjct: 467 ANVLALLKDGLQEISAGAGEEVEIVLDVTPCYAESGGQVTDHAIL---RGDGLEVA---I 520
Query: 582 KDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQ 641
V K + + VH+G + G L+ V+ V+P R +H+ATHLL ALKKV+G
Sbjct: 521 DAVSKPVEGLIVHRGKVLSGTLKRHDSVKVQVEPDRRGETARNHSATHLLHKALKKVLGD 580
Query: 642 ETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANL-LQTKVMALDDAKRA 700
+QAGSLV +RLRFDF + + EL IE ++N + ANL ++ L AK
Sbjct: 581 HVNQAGSLVDPERLRFDFTHYAAVTPEELGRIEEIVNNAV-LANLPVEVFETTLPKAKAM 639
Query: 701 GAIAMFGEKYGEQVKI 716
GA A+FGEKYG++V++
Sbjct: 640 GAAALFGEKYGKEVRV 655
>gi|229844682|ref|ZP_04464821.1| alanyl-tRNA synthetase [Haemophilus influenzae 6P18H1]
gi|229812396|gb|EEP48086.1| alanyl-tRNA synthetase [Haemophilus influenzae 6P18H1]
Length = 874
Score = 595 bits (1534), Expect = e-167, Method: Compositional matrix adjust.
Identities = 321/681 (47%), Positives = 442/681 (64%), Gaps = 50/681 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVPE DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 7 IRQSFLDFFHSKGHQVVESSSLVPENDPTLLFTNAGMNQFKDVFLGMDKRPYSRATTAQR 66
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI +AWE+ T GLP +
Sbjct: 67 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAINFAWEYLTSPQWLGLPKEK 126
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+ IWNKEVGVP E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 127 LWVTVYETDDEAYNIWNKEVGVPAERIIRIGDNKGAPYASDNFWAMGDTGPCGPCTEIFY 186
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N+ DG++E L + ++DTG+GLERI+
Sbjct: 187 D-HGDHIWGGPPGSPEEDGDRYIEIWNVVFMQFNRLADGTMEKLPRPSVDTGMGLERISA 245
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NYE D+ +I+K +E+ + D +N +L++I DH+R+ YL++DGV P
Sbjct: 246 VLQHVNSNYEIDIFKTLIEKTAEIVGAT-----DLSNKSLRVIADHIRSCAYLIADGVIP 300
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN GRGYV+RR+IRRAVR G LLG K +F + IE+ DVKA++
Sbjct: 301 SNEGRGYVLRRIIRRAVRHGHLLGAKE--------SFFYKLVPTLIEVMAEAGKDVKAKQ 352
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
+ + L+ EE +F +TLERG LLD+ ALS+ ++ LSG+ AF LYDT+GFP
Sbjct: 353 TNVEKLLRLEEEQFARTLERGLSLLDE----ALSQVKDG----ILSGEVAFKLYDTYGFP 404
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGY 515
+++T +V E +++D + FD EME+QR ++QAA + VD ++ + +T+F GY
Sbjct: 405 LDLTADVCRERNITIDEQAFDREMESQRTRAQAAS---QFGVDYNS-VIRVDGETKFEGY 460
Query: 516 DTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
+ ++A + +L +GK V + G V+L TPFYAESGGQIGD G+L + Q
Sbjct: 461 TEVESQAKITALFYDGKSVESIEAGQSAVVILENTPFYAESGGQIGDSGYL------SAQ 514
Query: 576 TAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAAL 635
VKD +K G VF H G + +G L+VG+ V AIVD K R ++H+ATHLL AAL
Sbjct: 515 GVTFNVKDTQK-YGQVFGHIGELTQGSLKVGQSVNAIVDAKRRHNTSLNHSATHLLHAAL 573
Query: 636 KKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALD 695
++++G Q GSLV+ LRFDF + +L EIE L+N I +QT +M +D
Sbjct: 574 RQILGLHVVQKGSLVSDKALRFDFAQPEAITKEQLSEIETLVNQKIRANFPVQTDIMDID 633
Query: 696 DAKRAGAIAMFGEKYGEQVKI 716
AK GA+A+FGEKYG++V++
Sbjct: 634 SAKAKGAMALFGEKYGDKVRV 654
>gi|148828002|ref|YP_001292755.1| alanyl-tRNA synthetase [Haemophilus influenzae PittGG]
gi|205830061|sp|A5UHW6.1|SYA_HAEIG RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|148719244|gb|ABR00372.1| alanyl-tRNA synthetase [Haemophilus influenzae PittGG]
Length = 874
Score = 595 bits (1533), Expect = e-167, Method: Compositional matrix adjust.
Identities = 324/681 (47%), Positives = 441/681 (64%), Gaps = 50/681 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVPE DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 7 IRQSFLDFFHSKGHQVVESSSLVPENDPTLLFTNAGMNQFKDVFLGMDKRPYSRATTAQR 66
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI +AWE+ T GLP +
Sbjct: 67 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAINFAWEYLTSPQWLGLPKEK 126
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+ IWNKEVGVP E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 127 LWVTVYETDDEAYNIWNKEVGVPAERIIRIGDNKGSPYASDNFWAMGDTGPCGPCTEIFY 186
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N+ DG++E L + ++DTG+GLERI+
Sbjct: 187 D-HGDHIWGGPPGSPEEDGDRYIEIWNVVFMQFNRLADGTMEKLPRPSVDTGMGLERISA 245
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NYE D+ +I K +E+ + D TN +L++I DH+R+ YL++DGV P
Sbjct: 246 VLQHVNSNYEIDIFKTLIAKTAEIVGAT-----DLTNKSLRVIADHIRSCAYLIADGVIP 300
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN GRGYV+RR+IRRAVR G LLG K +F + IE+ DVKA++
Sbjct: 301 SNEGRGYVLRRIIRRAVRHGHLLGAKE--------SFFYKLVPTLIEVMAEAGKDVKAKQ 352
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
+ + L+ EE +F +TLERG LLD+ ALS+ ++ LSG+ AF LYDT+GFP
Sbjct: 353 TNVEKLLRLEEEQFARTLERGLSLLDE----ALSQVKDG----ILSGEVAFKLYDTYGFP 404
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGY 515
+++T +V E +++D + FD EME QR ++QAA + VD ++ + +T+F GY
Sbjct: 405 LDLTADVCRERNITIDEQAFDREMEAQRTRAQAAS---QFGVDYNS-VIRVDGETKFEGY 460
Query: 516 DTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
+ ++A + +L +GK V + G V+L TPFYAESGGQIGD G+L TQG
Sbjct: 461 TEVESQAKITALFYDGKSVESIEAGQSAVVILENTPFYAESGGQIGDSGYLS-TQGV--- 516
Query: 576 TAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAAL 635
VKD +K G VF H G + +G L+VG+ V AIVD K R ++H+ATHLL AAL
Sbjct: 517 --TFNVKDTQK-YGQVFGHIGELTQGSLKVGQSVNAIVDAKRRHNTSLNHSATHLLHAAL 573
Query: 636 KKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALD 695
++++G Q GSLV+ LRFDF + +L EIE L+N I +QT +M +D
Sbjct: 574 RQILGLHVVQKGSLVSDKALRFDFAQPEAITKEQLSEIETLVNQKIRANFPVQTDIMDID 633
Query: 696 DAKRAGAIAMFGEKYGEQVKI 716
AK GA+A+FGEKYG++V++
Sbjct: 634 SAKAKGAMALFGEKYGDKVRV 654
>gi|145632173|ref|ZP_01787908.1| alanyl-tRNA synthetase [Haemophilus influenzae 3655]
gi|144987080|gb|EDJ93610.1| alanyl-tRNA synthetase [Haemophilus influenzae 3655]
Length = 874
Score = 594 bits (1532), Expect = e-167, Method: Compositional matrix adjust.
Identities = 321/681 (47%), Positives = 441/681 (64%), Gaps = 50/681 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVPE DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 7 IRQSFLDFFHSKGHQVVESSSLVPENDPTLLFTNAGMNQFKDVFLGMDKRPYSRATTAQR 66
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI +AWE+ T GLP +
Sbjct: 67 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAINFAWEYLTSPQWLGLPKEK 126
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+ IWNKEVGVP E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 127 LWVTVYETDDEAYNIWNKEVGVPAERIIRIGDNKGAPYASDNFWAMGDTGPCGPCTEIFY 186
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N+ DG++E L + ++DTG+GLERI+
Sbjct: 187 D-HGDHIWGGPPGSPEEDGDRYIEIWNVVFMQFNRLADGTMEKLPRPSVDTGMGLERISA 245
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NYE D+ +I K +E+ + D +N +L++I DH+R+ YL++DGV P
Sbjct: 246 VLQHVNSNYEIDIFKTLIAKTAEIVGAT-----DLSNKSLRVIADHIRSCAYLIADGVIP 300
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN GRGYV+RR+IRRAVR G LLG K +F + IE+ DVKA++
Sbjct: 301 SNEGRGYVLRRIIRRAVRHGHLLGAKE--------SFFYKLVPTLIEVMAEAGKDVKAKQ 352
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
+ + L+ EE +F +TLERG LLD+ ALS+ ++ LSG+ AF LYDT+GFP
Sbjct: 353 TNVEKLLRLEEEQFARTLERGLSLLDE----ALSQVKDG----ILSGEVAFKLYDTYGFP 404
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGY 515
+++T +V E +++D + FD EME+QR ++QAA + VD ++ + +T+F GY
Sbjct: 405 LDLTADVCRERNITIDEQAFDREMESQRTRAQAAS---QFGVDYNS-VIRVDGETKFEGY 460
Query: 516 DTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
+ ++A + +L +GK V + G V+L TPFYAESGGQIGD G+L + Q
Sbjct: 461 TEVESQAKITALFYDGKSVESIEAGQSAVVILENTPFYAESGGQIGDSGYL------SAQ 514
Query: 576 TAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAAL 635
VKD +K G VF H G + +G L+VG+ V AIVD K R ++H+ATHLL AAL
Sbjct: 515 GVTFNVKDTQK-YGQVFGHIGELTQGSLKVGQSVNAIVDAKRRHNTSLNHSATHLLHAAL 573
Query: 636 KKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALD 695
++++G Q GSLV+ LRFDF + +L EIE L+N I +QT +M +D
Sbjct: 574 RQILGLHVVQKGSLVSDKALRFDFAQPEAITKEQLSEIETLVNQKILANFPVQTDIMDID 633
Query: 696 DAKRAGAIAMFGEKYGEQVKI 716
AK GA+A+FGEKYG++V++
Sbjct: 634 SAKAKGAMALFGEKYGDKVRV 654
>gi|417843952|ref|ZP_12490017.1| Alanyl-tRNA synthetase [Haemophilus haemolyticus M21127]
gi|341948415|gb|EGT75045.1| Alanyl-tRNA synthetase [Haemophilus haemolyticus M21127]
Length = 874
Score = 593 bits (1530), Expect = e-167, Method: Compositional matrix adjust.
Identities = 321/681 (47%), Positives = 436/681 (64%), Gaps = 50/681 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVPE DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 7 IRQSFLDFFHSKGHQVVESSSLVPENDPTLLFTNAGMNQFKDVFLGMDKRPYSRATTAQR 66
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AI +AWE+ T GLP +
Sbjct: 67 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAINFAWEYLTSPRWLGLPKEK 126
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+ IWNKEVGVP E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 127 LWVTVYETDDEAYNIWNKEVGVPAERIIRIGDNKGAPYASDNFWAMGDTGPCGPCTEIFY 186
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N+ DG++E L + ++DTG+GLERI+
Sbjct: 187 D-HGDHIWGGPPGSPEEDGDRYIEIWNVVFMQFNRLADGTMEKLPRPSVDTGMGLERISA 245
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NYE D+ +I K +E+ + D +N +L++I DH+R+ YL++DGV P
Sbjct: 246 VLQHVNSNYEIDIFKTLIAKTAEVVGTT-----DLSNKSLRVIADHIRSCAYLIADGVIP 300
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN GRGYV+RR+IRRAVR G LLG K AF + IE+ DVKA++
Sbjct: 301 SNEGRGYVLRRIIRRAVRHGHLLGAKE--------AFFYKLVPTLIEVMAEAGKDVKAKQ 352
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
+ + L+ EE +F +TLERG LLD+ LA LSG+ AF LYDT+GFP
Sbjct: 353 VNVEKLLRLEEEQFARTLERGLSLLDEALAQVKDGV--------LSGEVAFKLYDTYGFP 404
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGY 515
+++T +V E +++D + FD EME QR ++QAA + VD ++ + +T+F GY
Sbjct: 405 LDLTADVCRERNITIDEQAFDREMEAQRTRAQAAS---QFGVDYNS-IIRVDGETKFEGY 460
Query: 516 DTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
+ ++A + +L +GK V + G V+L TPFYAESGGQIGD G+L + Q
Sbjct: 461 TEVESQAKITALFYDGKSVESIEAGQSAVVILENTPFYAESGGQIGDSGYL------SAQ 514
Query: 576 TAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAAL 635
+ VKD +K G VF H G + +G L+VG+ V AIVD + R ++H+ATHLL AAL
Sbjct: 515 GVIFNVKDTQK-YGQVFGHIGKLTQGSLKVGQSVNAIVDAERRHNTSLNHSATHLLHAAL 573
Query: 636 KKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALD 695
++V+GQ Q GSLV+ LRFDF + +L +IE L+N I +QT +M +D
Sbjct: 574 RQVLGQHVVQKGSLVSDKALRFDFAQPEAITKEQLTQIETLVNQKIRANFPVQTDIMDID 633
Query: 696 DAKRAGAIAMFGEKYGEQVKI 716
AK GA+A+FGEKYG+ V++
Sbjct: 634 SAKAKGAMALFGEKYGDNVRV 654
>gi|417840506|ref|ZP_12486638.1| Alanyl-tRNA synthetase [Haemophilus haemolyticus M19107]
gi|341948106|gb|EGT74741.1| Alanyl-tRNA synthetase [Haemophilus haemolyticus M19107]
Length = 874
Score = 593 bits (1530), Expect = e-167, Method: Compositional matrix adjust.
Identities = 321/681 (47%), Positives = 436/681 (64%), Gaps = 50/681 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVPE DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 7 IRQSFLDFFHSKGHQVVESSSLVPENDPTLLFTNAGMNQFKDVFLGMDKRPYSRATTAQR 66
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AI +AWE+ T GLP +
Sbjct: 67 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAINFAWEYLTSPQWLGLPKEK 126
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+ IWNKEVGVP E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 127 LWVTVYETDDEAYNIWNKEVGVPAERIIRIGDNKGAPYASDNFWAMGDTGPCGPCTEIFY 186
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N+ DG++E L + ++DTG+GLERI+
Sbjct: 187 D-HGDHIWGGPPGSPEEDGDRYIEIWNVVFMQFNRLADGTMEKLPRPSVDTGMGLERISA 245
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NYE D+ +I K +E+ + D +N +L++I DH+R+ YL++DGV P
Sbjct: 246 VLQHVNSNYEIDIFKTLIAKTAEVVGTT-----DLSNKSLRVIADHIRSCAYLIADGVIP 300
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN GRGYV+RR+IRRAVR G LLG K AF + IE+ DVKA++
Sbjct: 301 SNEGRGYVLRRIIRRAVRHGHLLGAKE--------AFFYKLVATLIEVMAEAGKDVKAKQ 352
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
+ + L+ EE +F +TLERG LLD+ LA LSG+ AF LYDT+GFP
Sbjct: 353 VNVEKLLRLEEEQFARTLERGLSLLDEALAQVKDGV--------LSGEVAFKLYDTYGFP 404
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGY 515
+++T +V E +++D + FD EME QR ++QAA + VD ++ + +T+F GY
Sbjct: 405 LDLTADVCRERNITIDEQAFDREMEAQRTRAQAAS---QFGVDYNS-IIRVDGETKFEGY 460
Query: 516 DTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
+ ++A + +L +GK V + G V+L TPFYAESGGQIGD G+L + Q
Sbjct: 461 TEIESQAKITALFHDGKSVESIEAGQSAVVILENTPFYAESGGQIGDSGYL------SAQ 514
Query: 576 TAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAAL 635
VKD +K G VF H G + +G L+VG+ V AIVD + R ++H+ATHLL AAL
Sbjct: 515 GVTFNVKDTQK-YGQVFGHIGELTQGCLKVGQSVNAIVDAERRHHTSLNHSATHLLHAAL 573
Query: 636 KKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALD 695
++V+GQ Q GSLV+ LRFDF + +L +IE L+N I +QT +M +D
Sbjct: 574 RQVLGQHVVQKGSLVSDKALRFDFAQPEAITKEQLTQIETLVNQKIRANFPVQTDIMDID 633
Query: 696 DAKRAGAIAMFGEKYGEQVKI 716
AK GA+A+FGEKYG++V++
Sbjct: 634 SAKAKGAMALFGEKYGDKVRV 654
>gi|373467833|ref|ZP_09559122.1| alanine--tRNA ligase [Haemophilus sp. oral taxon 851 str. F0397]
gi|371757491|gb|EHO46280.1| alanine--tRNA ligase [Haemophilus sp. oral taxon 851 str. F0397]
Length = 874
Score = 593 bits (1530), Expect = e-167, Method: Compositional matrix adjust.
Identities = 321/681 (47%), Positives = 435/681 (63%), Gaps = 50/681 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVPE DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 7 IRQSFLDFFHSKGHQVVESSSLVPENDPTLLFTNAGMNQFKDVFLGMDKRPYSRATTAQR 66
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AI +AWE+ T GLP +
Sbjct: 67 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAINFAWEYLTSPQWLGLPKEK 126
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+ IWNKEVGVP E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 127 LWVTVYETDDEAYNIWNKEVGVPAERIIRIGDNKGAPYASDNFWAMGDTGPCGPCTEIFY 186
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N+ DG++E L + ++DTG+GLERI+
Sbjct: 187 D-HGDHIWGGPPGSPEEDGDRYIEIWNVVFMQFNRLADGTMEKLPRPSVDTGMGLERISA 245
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NYE D+ +I K +E+ + D +N +L++I DH+R+ YL++DGV P
Sbjct: 246 VLQHVNSNYEIDIFKTLIAKTAEVVG-----TKDLSNKSLRVIADHIRSCAYLIADGVIP 300
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN GRGYV+RR+IRRAVR G LLG K AF + IE+ D+KA++
Sbjct: 301 SNEGRGYVLRRIIRRAVRHGHLLGAKE--------AFFYKLVPTLIEVMAEAGKDLKAKQ 352
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
+ + L+ EE +F +TLERG LLD+ LA LSG+ AF LYDT+GFP
Sbjct: 353 ANVEKLLRLEEEQFARTLERGLSLLDEALAQVKDGV--------LSGEVAFKLYDTYGFP 404
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGY 515
+++T +V E +++D + FD EME QR ++QAA + VD ++ + +T+F GY
Sbjct: 405 LDLTADVCRERNITIDEQAFDREMEAQRTRAQAAS---QFGVDYNS-IIRVDGETQFEGY 460
Query: 516 DTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
+ ++A + SL +GK V + G V+L TPFYAESGGQIGD G+L + Q
Sbjct: 461 TEVESQAKITSLFYDGKSVESIEAGQSAVVILENTPFYAESGGQIGDSGYL------SAQ 514
Query: 576 TAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAAL 635
VKD +K G VF H G + +G L+VG+ V AIVD + R ++H+ATHLL AAL
Sbjct: 515 GVTFNVKDTQK-YGQVFGHIGELTQGSLKVGQSVNAIVDAERRHNTSLNHSATHLLHAAL 573
Query: 636 KKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALD 695
++V+GQ Q GSLV+ LRFDF + +L +IE L+N I +QT +M +D
Sbjct: 574 RQVLGQHVVQKGSLVSDKALRFDFAQPEAITKEQLTQIETLVNQKIRANFPVQTDIMDID 633
Query: 696 DAKRAGAIAMFGEKYGEQVKI 716
AK GA+A+FGEKYG+ V++
Sbjct: 634 SAKAKGAMALFGEKYGDNVRV 654
>gi|15644148|ref|NP_229197.1| alanyl-tRNA synthetase [Thermotoga maritima MSB8]
gi|418045453|ref|ZP_12683548.1| alanyl-tRNA synthetase [Thermotoga maritima MSB8]
gi|6707752|sp|Q9X1B6.1|SYA_THEMA RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|4981959|gb|AAD36467.1|AE001792_7 alanyl-tRNA synthetase [Thermotoga maritima MSB8]
gi|351676338|gb|EHA59491.1| alanyl-tRNA synthetase [Thermotoga maritima MSB8]
Length = 863
Score = 593 bits (1529), Expect = e-167, Method: Compositional matrix adjust.
Identities = 307/672 (45%), Positives = 440/672 (65%), Gaps = 36/672 (5%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
+ + IR+ FL F+ +GHK+LPSASL+P+DP +L T+AGM+ FKPIF GKV R AT
Sbjct: 5 TSEEIREAFLKFFEKKGHKILPSASLIPDDPQLLFTVAGMVPFKPIFWGKVEPVYTRVAT 64
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
Q+C+RT D+ENVG+T RHHTFFEMLGNFSFGDYFK+EAI+WAWEF T G+P +LW+
Sbjct: 65 CQKCLRTVDIENVGKTPRHHTFFEMLGNFSFGDYFKEEAIEWAWEFLTQVLGVPEEKLWV 124
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWN-SGATGPCGPCSEIYYDFHPDRGCS 227
SVYE+D+EAF IWN+++G+P + I RMG +DNFW +G TGPCGP +EI+YD +GC
Sbjct: 125 SVYEEDEEAFRIWNEKIGLPEKRILRMGKEDNFWGPAGPTGPCGPDTEIFYDTGYSKGCP 184
Query: 228 D----VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNN 283
+ + RF+E +NLVF +Y + ++G L PL +KNIDTG GLER ++Q V +N
Sbjct: 185 EGEGCTPANSEGRFVEIWNLVFTEYYQDEEGKLHPLPRKNIDTGAGLERFCAMMQGVYSN 244
Query: 284 YETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYV 343
++TDL PIIK+ EL V Y ++++ ++++++I DH+RAI +L+S+GVFPSN GRGYV
Sbjct: 245 FDTDLFQPIIKRIEELTGVGY-KTDEEKDVSIRVIADHIRAITFLISEGVFPSNEGRGYV 303
Query: 344 VRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELK 403
+RR+IRRA+R G LLG + FL I + +E + ++ E + E L
Sbjct: 304 LRRIIRRAMRHGILLG--------MSEPFLYRIVDAVVEKMGKVYPEIVRGEGMVKEVLS 355
Query: 404 REELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVA 463
EE RF++TLE+G K+ D+++ ++ +DAF LYDT+G P+E+T E+A
Sbjct: 356 AEENRFLKTLEQGMKVFDEIVEKK----------GKIDSEDAFRLYDTYGLPLELTLEIA 405
Query: 464 EEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPD---TEFLGYDTLSA 520
+E GV VD++ F+ ME Q+R+S+AA V+ + + EK+P TEF GY+ L
Sbjct: 406 KEKGVEVDVQEFNKYMEEQQRKSRAAMGDVEFA--RRYEYLEKLPKDFRTEFTGYEKLED 463
Query: 521 KAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVE 580
+ V + + + V + S+G+ VEV+ +RTPFYAE GGQ+ D G + G V E
Sbjct: 464 EGEVVLVARDDETVEEASEGT-VEVVFSRTPFYAEKGGQVSDTGMVEWRDGKALVEYVFE 522
Query: 581 VKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIG 640
+ V VH+ I +G L G++V VD K R+ +HTATHLL AALKKV+G
Sbjct: 523 ASE------GVIVHRIKILDGTLRRGQKVILRVDKKRREATMRNHTATHLLHAALKKVLG 576
Query: 641 QETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRA 700
QAGSLVA DRLRFDF + L E+E++E L+N WI +A ++ + + ++A ++
Sbjct: 577 DHVRQAGSLVAPDRLRFDFTHFKGLSSAEIEQVEDLVNEWIMEAIPVEVRYTSYEEAVKS 636
Query: 701 GAIAMFGEKYGE 712
G +A+F EKYG+
Sbjct: 637 GVVALFTEKYGD 648
>gi|386266458|ref|YP_005829950.1| alanyl-tRNA synthetase [Haemophilus influenzae R2846]
gi|309973694|gb|ADO96895.1| Alanyl-tRNA synthetase [Haemophilus influenzae R2846]
Length = 874
Score = 593 bits (1529), Expect = e-166, Method: Compositional matrix adjust.
Identities = 325/681 (47%), Positives = 442/681 (64%), Gaps = 50/681 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVPE DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 7 IRQSFLDFFHSKGHQVVESSSLVPENDPTLLFTNAGMNQFKDVFLGMDKRPYSRATTAQR 66
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AI +AWE+ T GLP +
Sbjct: 67 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAINFAWEYLTSPQWLGLPKEK 126
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA++IWNKEVGVP E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 127 LWVTVYETDDEAYDIWNKEVGVPAERIIRIGDNKGSPYASDNFWAMGDTGPCGPCTEIFY 186
Query: 219 DFHPDR--GCSDVDLGDD-TRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G L +D R+IE +N+VFMQ+N+ DG++E L + ++DTG+GLERI+
Sbjct: 187 D-HGDHIWGGPPGSLEEDGDRYIEIWNVVFMQFNRLADGTMEKLPRPSVDTGMGLERISA 245
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NYE D+ +I K +E+ + D +N +L +I DH+R+ YL++DGV P
Sbjct: 246 VLQHVNSNYEIDIFKTLIAKTAEVVG-----TKDLSNKSLHVIADHIRSCAYLIADGVIP 300
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN GRGYV+RR+IRRAVR G LLG K AF + IE+ DVKA++
Sbjct: 301 SNEGRGYVLRRIIRRAVRHGHLLGAKE--------AFFYKLVPTLIEVMAEAGKDVKAKQ 352
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
+ + L+ EE +F +TLERG LLD+ AL++ + S LSG+ AF LYDT+GFP
Sbjct: 353 ANVEKLLRLEEEQFARTLERGLSLLDE----ALTQVKNS----VLSGEVAFKLYDTYGFP 404
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGY 515
+++T +V E +++D + FD EME QR ++QAA + VD ++ + +T+F GY
Sbjct: 405 LDLTADVCRERNITIDEQAFDREMEAQRTRAQAAS---QFGVDYNS-VIRVDGETKFEGY 460
Query: 516 DTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
+ ++A + +L +GK V + G V+L TPFYAESGGQIGD G+L TQG
Sbjct: 461 TEVESQAKITALFYDGKSVESIEAGQSAVVILENTPFYAESGGQIGDSGYLS-TQGV--- 516
Query: 576 TAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAAL 635
VKD +K G VF H G + +G L+VG+ V AIVD K R ++H+ATHLL AAL
Sbjct: 517 --TFNVKDTQK-YGQVFGHIGELTQGSLKVGQSVNAIVDAKRRHNTSLNHSATHLLHAAL 573
Query: 636 KKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALD 695
++++G Q GSLV+ LRFDF + +L EIE L+N I +QT +M +D
Sbjct: 574 RQILGLHVVQKGSLVSDKVLRFDFAQPEAITKEQLSEIETLVNQKIRANFPVQTDIMDID 633
Query: 696 DAKRAGAIAMFGEKYGEQVKI 716
AK GA+A+FGEKYG++V++
Sbjct: 634 SAKAKGAMALFGEKYGDKVRV 654
>gi|68249409|ref|YP_248521.1| alanyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
gi|81336165|sp|Q4QM86.1|SYA_HAEI8 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|68057608|gb|AAX87861.1| alanyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
Length = 874
Score = 593 bits (1529), Expect = e-166, Method: Compositional matrix adjust.
Identities = 323/681 (47%), Positives = 441/681 (64%), Gaps = 50/681 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVPE DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 7 IRQSFLDFFHSKGHQVVESSSLVPENDPTLLFTNAGMNQFKDVFLGMDKRPYSRATTAQR 66
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI +AWE+ T GLP +
Sbjct: 67 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAINFAWEYLTSPQWLGLPKEK 126
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+ IWNK+VGVP E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 127 LWVTVYETDDEAYNIWNKDVGVPAERIIRIGDNKGSPYASDNFWAMGDTGPCGPCTEIFY 186
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N+ DG++E L + ++DTG+GLERI+
Sbjct: 187 D-HGDHIWGGPPGSPEEDGDRYIEIWNVVFMQFNRLADGTMEKLPRPSVDTGMGLERISA 245
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NYE D+ +I K +E+ + D TN +L++I DH+R+ YL++DGV P
Sbjct: 246 VLQHVNSNYEIDIFKTLIAKTAEIVGAT-----DLTNKSLRVIADHIRSCAYLIADGVIP 300
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN GRGYV+RR+IRRAVR G LLG K +F + IE+ DVKA++
Sbjct: 301 SNEGRGYVLRRIIRRAVRHGHLLGAKE--------SFFYKLVPTLIEVMAEAGKDVKAKQ 352
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
+ + L+ EE +F +TLERG LLD+ ALS+ ++ LSG+ AF LYDT+GFP
Sbjct: 353 TNVEKLLRLEEEQFARTLERGLSLLDE----ALSQVKDG----ILSGEVAFKLYDTYGFP 404
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGY 515
+++T +V E +++D + FD EME QR ++QAA + VD ++ + +T+F GY
Sbjct: 405 LDLTADVCRERNITIDEQAFDREMEAQRTRAQAAS---QFGVDYNS-VIRVDGETKFEGY 460
Query: 516 DTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
+ ++A + +L +GK V + G V+L TPFYAESGGQIGD G+L TQG
Sbjct: 461 TEVESQAKITALFYDGKSVESIEVGQSAVVILENTPFYAESGGQIGDSGYLS-TQGV--- 516
Query: 576 TAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAAL 635
VKD +K G VF H G + +G L+VG+ V AIVD K R ++H+ATHLL AAL
Sbjct: 517 --TFNVKDTQK-YGQVFGHIGELTQGSLKVGQSVNAIVDAKRRHNTSLNHSATHLLHAAL 573
Query: 636 KKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALD 695
++++G Q GSLV+ LRFDF + +L EIE L+N I +QT +M +D
Sbjct: 574 RQILGLHVVQKGSLVSDKALRFDFAQPEAITKEQLSEIETLVNQKIRANFPVQTDIMDID 633
Query: 696 DAKRAGAIAMFGEKYGEQVKI 716
AK GA+A+FGEKYG++V++
Sbjct: 634 SAKAKGAMALFGEKYGDKVRV 654
>gi|281412824|ref|YP_003346903.1| alanyl-tRNA synthetase [Thermotoga naphthophila RKU-10]
gi|281373927|gb|ADA67489.1| alanyl-tRNA synthetase [Thermotoga naphthophila RKU-10]
Length = 863
Score = 593 bits (1529), Expect = e-166, Method: Compositional matrix adjust.
Identities = 306/672 (45%), Positives = 440/672 (65%), Gaps = 36/672 (5%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
+ + IR+ FL F+ +GHK+LPSASL+P+DP +L T+AGM+ FKPIF GKV R AT
Sbjct: 5 TSEEIREAFLKFFEKKGHKILPSASLIPDDPQLLFTVAGMVPFKPIFWGKVEPVYTRVAT 64
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
Q+C+RT D+ENVG+T RHHTFFEMLGNFSFGDYFK+EAI+WAWEF T G+P +LW+
Sbjct: 65 CQKCLRTVDIENVGKTPRHHTFFEMLGNFSFGDYFKEEAIEWAWEFLTQVLGVPEEKLWV 124
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWN-SGATGPCGPCSEIYYDFHPDRGCS 227
SVYE+D+EAF IWN+++G+P + I RMG +DNFW +G TGPCGP +EI+YD +GC
Sbjct: 125 SVYEEDEEAFRIWNEKIGLPEKKILRMGKEDNFWGPAGPTGPCGPDTEIFYDTGYSKGCP 184
Query: 228 D----VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNN 283
+ + RF+E +NLVF +Y + ++G L PL +KNIDTG GLER ++Q V +N
Sbjct: 185 EGEECTPANSEGRFVEIWNLVFTEYYQDEEGKLHPLPRKNIDTGAGLERFCAMMQGVYSN 244
Query: 284 YETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYV 343
++TDL PII + EL V Y ++++ ++++++I DH+RAI +L+S+GVFPSN GRGYV
Sbjct: 245 FDTDLFQPIINRIEELTGVGY-KTDEEKDVSIRVIADHIRAITFLISEGVFPSNEGRGYV 303
Query: 344 VRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELK 403
+RR+IRRA+R G LLG + FL I + +E + ++ E + E L
Sbjct: 304 LRRIIRRAMRHGILLG--------MSEPFLYRIVDAVVEKMGKVYPEIVRGEGMVKEVLS 355
Query: 404 REELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVA 463
EE RF++TLE+G K+ D+++ ++ +DAF LYDT+G P+E+T E+A
Sbjct: 356 AEENRFLKTLEQGMKVFDEIVEKK----------GKIDSEDAFRLYDTYGLPLELTLEIA 405
Query: 464 EEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPD---TEFLGYDTLSA 520
+E GV VD++ F+ ME Q+R+S+AA V+ + + EK+P TEF GY+ L
Sbjct: 406 KEKGVEVDVQEFNKYMEEQQRKSRAAMGDVEFA--RRYEYLEKLPKDFRTEFTGYEKLED 463
Query: 521 KAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVE 580
+ V + + + V + S+G+ VEV+ +RTPFYAE GGQ+ D G + G V E
Sbjct: 464 EGEVVLIARDDETVEEASEGT-VEVVFSRTPFYAEKGGQVSDTGMVEWRDGKALVEYVFE 522
Query: 581 VKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIG 640
+ V VH+ I +G L G++V VD K R+ +HTATHLL AALKKV+G
Sbjct: 523 ASE------GVIVHRIKILDGTLRRGQKVVLRVDKKRRESTMRNHTATHLLHAALKKVLG 576
Query: 641 QETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRA 700
QAGSLVA DRLRFDF + L +E+E++E L+N WI +A ++ + + ++A ++
Sbjct: 577 DHVRQAGSLVAPDRLRFDFTHFKGLSSSEIEQVEDLVNEWIMEAIPVEVRYTSYEEAVKS 636
Query: 701 GAIAMFGEKYGE 712
G +A+F EKYG+
Sbjct: 637 GVVALFTEKYGD 648
>gi|145636626|ref|ZP_01792293.1| alanyl-tRNA synthetase [Haemophilus influenzae PittHH]
gi|145270152|gb|EDK10088.1| alanyl-tRNA synthetase [Haemophilus influenzae PittHH]
Length = 874
Score = 593 bits (1528), Expect = e-166, Method: Compositional matrix adjust.
Identities = 320/681 (46%), Positives = 436/681 (64%), Gaps = 50/681 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVPE DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 7 IRQSFLDFFHSKGHQVVESSSLVPENDPTLLFTNAGMNQFKDVFLGMDKRPYSRATTAQR 66
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI +AWE+ T GLP +
Sbjct: 67 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAINFAWEYLTSPQWLGLPKEK 126
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+ IWNK+VGVP E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 127 LWVTVYETDDEAYNIWNKDVGVPAERIIRIGDNKGSPYASDNFWAMGDTGPCGPCTEIFY 186
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N+ DG++E L + ++DTG+GLERI+
Sbjct: 187 D-HGDHIWGGPPGSPEEDGDRYIEIWNVVFMQFNRLADGTMEKLPRPSVDTGMGLERISA 245
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NYE D+ +I K +E+ + D TN +L++I DH+R+ YL++DGV P
Sbjct: 246 VLQHVNSNYEIDIFKTLIAKTAEIVGAT-----DLTNKSLRVIADHIRSCAYLIADGVIP 300
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN GRGYV+RR+IRRAVR G LLG K +F + IE+ DVKA++
Sbjct: 301 SNEGRGYVLRRIIRRAVRHGHLLGAKE--------SFFYKLVPTLIEVMAEAGKDVKAKQ 352
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
+ + L+ EE +F +TLERG LLD+ LA LSG+ AF LYDT+GFP
Sbjct: 353 TNVEKLLRLEEEQFARTLERGLSLLDEALAQVKDGV--------LSGEVAFKLYDTYGFP 404
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGY 515
+++T +V E +++D + FD EME QR ++QAA + VD ++ + +T+F GY
Sbjct: 405 LDLTADVCRERNITIDEQAFDREMEAQRTRAQAAS---QFGVDYNS-VIRVDGETKFEGY 460
Query: 516 DTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
+ ++A + +L +GK V + G V+L TPFYAESGGQIGD G+L + Q
Sbjct: 461 TEVESQAKITALFYDGKSVESIEAGQSAVVILENTPFYAESGGQIGDSGYL------SAQ 514
Query: 576 TAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAAL 635
VKD +K G VF H G + +G L+VG+ V AIVD K R ++H+ATHLL AAL
Sbjct: 515 GVTFNVKDTQK-YGQVFGHIGELTQGSLKVGQSVNAIVDAKRRHNTSLNHSATHLLHAAL 573
Query: 636 KKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALD 695
++++G Q GSLV+ LRFDF + +L EIE L+N I +QT +M +D
Sbjct: 574 RQILGLHVVQKGSLVSDKALRFDFAQPEAITKEQLSEIETLVNQKIRANFPVQTDIMDID 633
Query: 696 DAKRAGAIAMFGEKYGEQVKI 716
AK GA+A+FGEKYG++V++
Sbjct: 634 SAKAKGAMALFGEKYGDKVRV 654
>gi|145634774|ref|ZP_01790482.1| alanyl-tRNA synthetase [Haemophilus influenzae PittAA]
gi|145267940|gb|EDK07936.1| alanyl-tRNA synthetase [Haemophilus influenzae PittAA]
Length = 874
Score = 593 bits (1528), Expect = e-166, Method: Compositional matrix adjust.
Identities = 320/681 (46%), Positives = 441/681 (64%), Gaps = 50/681 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVPE DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 7 IRQSFLDFFHSKGHQVVESSSLVPENDPTLLFTNAGMNQFKDVFLGMDKRPYSRATTAQR 66
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI +AWE+ T GLP +
Sbjct: 67 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAINFAWEYLTSPQWLGLPKEK 126
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+ IWNK+VGVP E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 127 LWVTVYETDDEAYNIWNKDVGVPAERIIRIGDNKGAPYASDNFWAMGDTGPCGPCTEIFY 186
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N+ DG++E L + ++DTG+GLERI+
Sbjct: 187 D-HGDHIWGGPPGSPEEDGDRYIEIWNVVFMQFNRLADGTMEKLPRPSVDTGMGLERISA 245
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NYE D+ +I K +E+ + D TN +L++I DH+R+ YL++DGV P
Sbjct: 246 VLQHVNSNYEIDIFKTLIAKTAEIVGAT-----DLTNKSLRVIADHIRSCAYLIADGVIP 300
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN GRGYV+RR+IRRAVR G LLG K +F + I++ DVKA++
Sbjct: 301 SNEGRGYVLRRIIRRAVRHGHLLGAKE--------SFFYKLVPTLIDVMAEAGKDVKAKQ 352
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
+ + L+ EE +F +TLERG LLD+ ALS+ ++ LSG+ AF LYDT+GFP
Sbjct: 353 TNVEKLLRLEEEQFARTLERGLSLLDE----ALSQVKDG----ILSGEVAFKLYDTYGFP 404
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGY 515
+++T +V E +++D + FD EME+QR ++QAA + VD ++ + +T+F GY
Sbjct: 405 LDLTADVCRERNITIDEQAFDREMESQRTRAQAAS---QFGVDYNS-VIRVDGETKFEGY 460
Query: 516 DTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
+ ++A + +L +GK V + G V+L TPFYAESGGQIGD G+L + Q
Sbjct: 461 TEVESQAKITALFYDGKSVESIEAGQSAVVILENTPFYAESGGQIGDSGYL------SGQ 514
Query: 576 TAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAAL 635
VKD +K G VF H G + +G L+VG+ V AIVD K R ++H+ATHLL AAL
Sbjct: 515 GVTFNVKDTQK-YGQVFGHIGELTQGSLKVGQSVNAIVDAKRRHNTSLNHSATHLLHAAL 573
Query: 636 KKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALD 695
++++G Q GSLV+ LRFDF + +L EIE L+N I +QT +M +D
Sbjct: 574 RQILGLHVVQKGSLVSDKALRFDFAQPEAITKEQLSEIETLVNQKIRANFPVQTDIMDID 633
Query: 696 DAKRAGAIAMFGEKYGEQVKI 716
AK GA+A+FGEKYG++V++
Sbjct: 634 SAKAKGAMALFGEKYGDKVRV 654
>gi|222100169|ref|YP_002534737.1| alanyl-tRNA synthetase [Thermotoga neapolitana DSM 4359]
gi|221572559|gb|ACM23371.1| Alanyl-tRNA synthetase [Thermotoga neapolitana DSM 4359]
Length = 864
Score = 593 bits (1528), Expect = e-166, Method: Compositional matrix adjust.
Identities = 300/672 (44%), Positives = 440/672 (65%), Gaps = 35/672 (5%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
+ + IR+ FL F+ +GHK+LPSASL+P+DP +L T+AGM+ FKPIF GKV R AT
Sbjct: 5 TSEEIREAFLRFFEKKGHKILPSASLIPDDPQLLFTVAGMVPFKPIFWGKVEPVYTRIAT 64
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
Q+C+RT D+ENVG+T RHHTFFEMLGNFSFGDYFK+EAI+WAWEF T G+P +LW+
Sbjct: 65 CQKCLRTVDIENVGKTPRHHTFFEMLGNFSFGDYFKEEAIEWAWEFLTQVLGVPEEKLWV 124
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWN-SGATGPCGPCSEIYYDFHPDRGCS 227
SVYE+D+EAF IWN+++G+P + I R+G +DNFW +G TGPCGP +EI+YD +GC
Sbjct: 125 SVYEEDEEAFRIWNEKIGLPEKKILRLGKEDNFWGPAGPTGPCGPDTEIFYDTGYSKGCP 184
Query: 228 D----VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNN 283
+ + RF+E +NLVF +Y + ++G L PL +KNIDTG GLER ++Q V +N
Sbjct: 185 EGEECTPANSEGRFVEIWNLVFTEYYQDEEGKLHPLPRKNIDTGAGLERFCAMMQGVYSN 244
Query: 284 YETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYV 343
++TDL PIIK EL VSY ++++ ++++++I DH+RAI +L+S+GVFPSN GRGYV
Sbjct: 245 FDTDLFQPIIKAIEELTGVSY-KTDEEKDISIRVIADHIRAITFLISEGVFPSNEGRGYV 303
Query: 344 VRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELK 403
+RR+IRRA+R G LLG + FL + + +E + ++ + + E L
Sbjct: 304 LRRIIRRAMRHGILLG--------MNEPFLYKVVDAVVEKMGKVYPEIVRGKDMVKEVLS 355
Query: 404 REELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVA 463
EE RF++TLE+G ++ D+++ ++ QDAF LYDT+G P+E+T E+A
Sbjct: 356 SEENRFLKTLEQGMRIFDELVEKK----------GKIDSQDAFRLYDTYGLPLELTLEIA 405
Query: 464 EEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPD---TEFLGYDTLSA 520
+E GV +D+K FD M+ Q+R+S+ A V+ + + E +P+ TEF GY+ L
Sbjct: 406 KEKGVEIDVKDFDRYMKEQQRKSREAMGKVEFA--KRYEYLESLPEGFKTEFTGYERLED 463
Query: 521 KAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVE 580
+A + +P+ + + VEV+ +RTPFYAE GGQ+ D G + G + V E
Sbjct: 464 EAETVLIAKENRPLEEAKEKDTVEVVFSRTPFYAEKGGQVSDVGTVEWESGEGRVEYVFE 523
Query: 581 VKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIG 640
+L V VH+ + +G+L G++V VD K R+ +HTATHLL AAL+KV+G
Sbjct: 524 ------ALEGVIVHRIRVLKGILRRGQKVFLKVDRKRRKDTMRNHTATHLLHAALRKVLG 577
Query: 641 QETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRA 700
+ QAGSLVA +RLRFDF +R L E++++E ++N WI A ++ + + ++A R+
Sbjct: 578 EHVRQAGSLVAPERLRFDFTHYRALSAEEIKKVEDMVNEWIMQAIPVEVRYTSYEEAIRS 637
Query: 701 GAIAMFGEKYGE 712
G IA+F EKYG+
Sbjct: 638 GVIALFTEKYGD 649
>gi|148826541|ref|YP_001291294.1| alanyl-tRNA synthetase [Haemophilus influenzae PittEE]
gi|229845865|ref|ZP_04465977.1| alanyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
gi|205830060|sp|A5UDR0.1|SYA_HAEIE RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|148716701|gb|ABQ98911.1| alanyl-tRNA synthetase [Haemophilus influenzae PittEE]
gi|229810869|gb|EEP46586.1| alanyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
Length = 874
Score = 593 bits (1528), Expect = e-166, Method: Compositional matrix adjust.
Identities = 320/681 (46%), Positives = 440/681 (64%), Gaps = 50/681 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVPE DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 7 IRQSFLDFFHSKGHQVVESSSLVPENDPTLLFTNAGMNQFKDVFLGMDKRPYSRATTAQR 66
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI +AWE+ T GLP +
Sbjct: 67 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAINFAWEYLTSPQWLGLPKEK 126
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+ IWNKEVGVP E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 127 LWVTVYETDDEAYNIWNKEVGVPAERIIRIGDNKSAPYASDNFWAMGDTGPCGPCTEIFY 186
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N+ DG++E L + ++DTG+GLERI+
Sbjct: 187 D-HGDHIWGGPPGSPEEDGDRYIEIWNVVFMQFNRLADGTMEKLPRPSVDTGMGLERISA 245
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NYE D+ +I K +E+ + D TN +L++I DH+R+ YL++DGV P
Sbjct: 246 VLQHVNSNYEIDIFKTLIAKTAEIVGAT-----DLTNKSLRVIADHIRSCAYLIADGVIP 300
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN GRGYV+RR+IRRAVR G LLG K +F + I++ DVKA++
Sbjct: 301 SNEGRGYVLRRIIRRAVRHGHLLGAKE--------SFFYKLVPTLIDVMAEAGKDVKAKQ 352
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
+ + L+ EE +F +TLERG LLD+ ALS+ ++ LSG+ AF LYDT+GFP
Sbjct: 353 TNVEKLLRLEEEQFARTLERGLSLLDE----ALSQVKDG----ILSGEVAFKLYDTYGFP 404
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGY 515
+++T +V E +++D + FD EME QR ++QAA + VD ++ + +T+F GY
Sbjct: 405 LDLTADVCRERNITIDEQAFDREMEAQRTRAQAAS---QFGVDYNS-IIRVDGETKFEGY 460
Query: 516 DTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
+ ++A + +L +GK V + G V+L TPFYAESGGQIGD G+L + Q
Sbjct: 461 TEVESQAKITALFYDGKSVESIEAGQSAVVILENTPFYAESGGQIGDSGYL------SAQ 514
Query: 576 TAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAAL 635
VKD +K G VF H G + +G L+VG+ V AIVD K R ++H+ATHLL AAL
Sbjct: 515 GVTFNVKDTQK-YGQVFGHIGELTQGSLKVGQSVNAIVDAKRRHNTSLNHSATHLLHAAL 573
Query: 636 KKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALD 695
++++G Q GSLV+ LRFDF + +L +IE L+N I +QT +M +D
Sbjct: 574 RQILGLHVVQKGSLVSDKALRFDFAQPEAITKEQLTQIETLVNQKIRANFPVQTDIMDID 633
Query: 696 DAKRAGAIAMFGEKYGEQVKI 716
AK GA+A+FGEKYG++V++
Sbjct: 634 SAKAKGAMALFGEKYGDKVRV 654
>gi|374579527|ref|ZP_09652621.1| alanine--tRNA ligase [Desulfosporosinus youngiae DSM 17734]
gi|374415609|gb|EHQ88044.1| alanine--tRNA ligase [Desulfosporosinus youngiae DSM 17734]
Length = 875
Score = 592 bits (1527), Expect = e-166, Method: Compositional matrix adjust.
Identities = 311/675 (46%), Positives = 432/675 (64%), Gaps = 31/675 (4%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
SG+ +R FL ++ ++GHK+LPSASL+P +DPT+LLT+AGM+ FKP F +V PRA
Sbjct: 3 SGNELRDMFLKYFEAKGHKILPSASLIPKDDPTLLLTVAGMVPFKPYFQRRVEPPFPRAT 62
Query: 108 TSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
T+Q+C+RT D+E VG+T+RHHT+FEMLGNFSFGDYFK EAI WAWE+ T LP +LW
Sbjct: 63 TAQKCVRTPDLEEVGKTARHHTYFEMLGNFSFGDYFKTEAIPWAWEYITEVLKLPVEKLW 122
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCS 227
+++Y +DD+A IW K GV E I +G +NFW +G TGPCGPCSEIY D RGC
Sbjct: 123 VTIYPEDDDAKGIWEK-AGVRSERI--VGDPENFWAAGPTGPCGPCSEIYVDLGVARGCG 179
Query: 228 D--VDLGDDT-RFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNY 284
+G D RF+E +NLVFMQYN+ + G L PL ++NIDTG+GLERIA ++Q V N+
Sbjct: 180 KPGCAIGCDCDRFLEIWNLVFMQYNRDEAGVLTPLPKQNIDTGMGLERIASVMQGVETNF 239
Query: 285 ETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVV 344
+TDL PII + LA V Y + N +++L LK++ DH+RA+ ++LSDG+ P+N GRGYV+
Sbjct: 240 DTDLFRPIIDHVANLAGVKY-KDNPKSDLALKVVSDHVRAVSFMLSDGIRPNNEGRGYVL 298
Query: 345 RRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKR 404
RR++RRAVR +LLGI + LE AF I ++ H ++K E IL L
Sbjct: 299 RRILRRAVRYAKLLGID---KPFLESAF--RIIQRDY---AHAYPELKENENFILNHLNL 350
Query: 405 EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAE 464
EE F+ TLE+G +LL + + L + L+G DAF LY+T+GFPVE+T+E+
Sbjct: 351 EEKNFLATLEQGTQLLQEKVKGLLKQGETV-----LTGTDAFYLYETYGFPVELTEEMLA 405
Query: 465 EHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPD---TEFLGYDTLSAK 521
E G++VDM F E R +++ ++ +V +S +LAEK T F+GY+ +SA
Sbjct: 406 EQGMTVDMVSFQAAAEEHRLKAKEQSQQMR-AVAESPELAEKAKSLGMTPFIGYEKVSAT 464
Query: 522 AIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEV 581
+ +E L V+GK + +G +V + L TPFYAESGGQ+ D GF+ + A V
Sbjct: 465 SRIEGLFVDGKEMQDAGEGEEVTIFLAETPFYAESGGQVSDVGFIRTPR------AEARV 518
Query: 582 KDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQ 641
+VKK + H+ +R GV +G VE V R HH+ATHLLQ+AL+ V+G+
Sbjct: 519 LEVKKGVTGTVYHRAEVRTGVFHIGESVEVEVGNSERLATARHHSATHLLQSALRSVLGE 578
Query: 642 ETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAG 701
QAGSLV +RLRFDF P+ L +E LIN + +Q M+L +AK++G
Sbjct: 579 HVQQAGSLVTPERLRFDFTHFSPMTPDGLRAVEGLINEAVLKNMPVQATEMSLKEAKKSG 638
Query: 702 AIAMFGEKYGEQVKI 716
A A+FGEKYGE V++
Sbjct: 639 ATALFGEKYGETVRV 653
>gi|260579906|ref|ZP_05847736.1| alanyl-tRNA synthetase [Haemophilus influenzae RdAW]
gi|260093190|gb|EEW77123.1| alanyl-tRNA synthetase [Haemophilus influenzae RdAW]
Length = 874
Score = 592 bits (1527), Expect = e-166, Method: Compositional matrix adjust.
Identities = 319/681 (46%), Positives = 441/681 (64%), Gaps = 50/681 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVPE DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 7 IRQSFLDFFHSKGHQVVESSSLVPENDPTLLFTNAGMNQFKDVFLGMDKRPYSRATTAQR 66
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI +AWE+ T GLP +
Sbjct: 67 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAINFAWEYLTSPQWLGLPKEK 126
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+ IWNK+VGVP E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 127 LWVTVYETDDEAYNIWNKDVGVPAERIIRIGDNKGSPYASDNFWAMGDTGPCGPCTEIFY 186
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N+ DG++E L + ++DTG+GLERI+
Sbjct: 187 D-HGDHIWGGPPGSPEEDGDRYIEIWNVVFMQFNRLADGTMEKLPRPSVDTGMGLERISA 245
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NYE D+ +I K +E+ + D TN +L++I DH+R+ YL++DGV P
Sbjct: 246 VLQHVNSNYEIDIFKTLIAKTAEIVGAT-----DLTNKSLRVIADHIRSCAYLIADGVIP 300
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN GRGYV+RR+IRRAVR G LLG K +F + I++ DVKA++
Sbjct: 301 SNEGRGYVLRRIIRRAVRHGHLLGAKE--------SFFYKLVPTLIDVMAEAGKDVKAKQ 352
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
+ + L+ EE +F +TLERG LLD+ ALS+ ++ LSG+ AF LYDT+GFP
Sbjct: 353 TNVEKLLRLEEEQFARTLERGLSLLDE----ALSQVKDG----ILSGEVAFKLYDTYGFP 404
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGY 515
+++T +V E +++D + FD +ME QR ++QAA + VD ++ + +T+F GY
Sbjct: 405 LDLTADVCRERNITIDEQAFDRKMEAQRTRAQAAS---QFGVDYNS-VIRVDGETKFEGY 460
Query: 516 DTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
+ ++A + +L +GK V + G V+L TPFYAESGGQIGD G+L + Q
Sbjct: 461 TEVESQAKITALFYDGKSVESIEAGQSAVVILENTPFYAESGGQIGDSGYL------STQ 514
Query: 576 TAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAAL 635
+ VKD +K G VF H G + +G L+VG+ V AIVD K R ++H+ATHLL AAL
Sbjct: 515 SVTFNVKDTQK-YGQVFGHIGELTQGSLKVGQSVNAIVDAKRRHNTSLNHSATHLLHAAL 573
Query: 636 KKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALD 695
++++G Q GSLV+ LRFDF + +L EIE L+N I +QT +M +D
Sbjct: 574 RQILGLHVVQKGSLVSDKALRFDFAQPEAITKEQLSEIETLVNQKIRANFPVQTDIMDID 633
Query: 696 DAKRAGAIAMFGEKYGEQVKI 716
AK GA+A+FGEKYG++V++
Sbjct: 634 SAKAKGAMALFGEKYGDKVRV 654
>gi|385799736|ref|YP_005836140.1| alanyl-tRNA synthetase [Halanaerobium praevalens DSM 2228]
gi|309389100|gb|ADO76980.1| alanyl-tRNA synthetase [Halanaerobium praevalens DSM 2228]
Length = 877
Score = 592 bits (1526), Expect = e-166, Method: Compositional matrix adjust.
Identities = 318/675 (47%), Positives = 442/675 (65%), Gaps = 29/675 (4%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
SGD IR+ +LDF+ S+GH +L SA L+P +DPT+L AGM FKP F G + R +
Sbjct: 4 SGDEIRQAYLDFFESKGHLILDSAPLIPKDDPTLLWINAGMAPFKPYFNGSLEPPKTRIS 63
Query: 108 TSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
TSQ+CIRTND+ENVG+T+RHHT+FEMLGNFSFGDYFK+EAI WAWEF T L +RLW
Sbjct: 64 TSQKCIRTNDIENVGKTARHHTYFEMLGNFSFGDYFKEEAISWAWEFVTEVLELEEDRLW 123
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCS 227
I++YE+D+EAF IW+ +VG+ E I RMG +NFW G TGPCGPCSEI+YD P+ G S
Sbjct: 124 ITIYEEDEEAFAIWHDKVGLDEERIVRMGKKENFWQIG-TGPCGPCSEIHYDRGPEAGES 182
Query: 228 DVDL--GDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYE 285
+ D+ G+ R++E +NLVF QYN + G + L KNIDTG+GLER+A ILQ N+E
Sbjct: 183 EEDVLGGEGDRYLEIWNLVFTQYNYTEAGEYQELPNKNIDTGMGLERVASILQATETNFE 242
Query: 286 TDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVR 345
TDLI P+I + E++ + Y Q ++++ + ++I DH+R+ +SDG PSN GRGYV+R
Sbjct: 243 TDLIKPLIDQVVEMSGIDY-QKDEQSLTSYRVIADHIRSASVAISDGALPSNEGRGYVIR 301
Query: 346 RLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKRE 405
RLIRRA R GR LG K FL + EK E+ + D+K + + +K E
Sbjct: 302 RLIRRAARYGRKLGFK--------EPFLYQLVEKTAEIVAAVAPDLKKQLAHVKNVIKSE 353
Query: 406 ELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEE 465
E F+QTLE+G +L+ +L + + +E +SGQDAF LYDT+GFP+++T+++A E
Sbjct: 354 EKSFLQTLEQGLNILEDILNNLKAENKEV-----ISGQDAFRLYDTYGFPLDLTEDIAAE 408
Query: 466 HGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDD----SADLAEKIPDTEFLGYDTLSAK 521
G+ VD KGF+ EME QR++++ A + + A+ ++I F GY +L AK
Sbjct: 409 EGIKVDQKGFEKEMEAQRKRAREARAETSFNNGEIEKIYAEYQDQIEARNFTGYHSLQAK 468
Query: 522 AIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEV 581
A + L+ K + G E++L +TPFYAESGGQ+GD G + N Q EV
Sbjct: 469 AQIVGLVKAEKAQKSLKAGDKAEIILTKTPFYAESGGQLGDKGVI-----KNDQFE-AEV 522
Query: 582 KDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQ 641
KD K VFVH+ +++G +EVG EV A+V R+ HH+ATHLL ALK+V+G+
Sbjct: 523 KDTVKK-AEVFVHQVEVKKGKIEVGEEVTAVVYHNRREATARHHSATHLLHKALKEVLGE 581
Query: 642 ETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAG 701
+Q+GSLVA DRLRFDF L ELEE+ER +N I + ++T++ A+D+AK G
Sbjct: 582 HVNQSGSLVAPDRLRFDFTHFSALSSQELEELERKVNKAIRENYPVETEIKAIDEAKDMG 641
Query: 702 AIAMFGEKYGEQVKI 716
A A+FGEKYG++V++
Sbjct: 642 ATALFGEKYGQEVRV 656
>gi|378697015|ref|YP_005178973.1| alanyl-tRNA synthetase [Haemophilus influenzae 10810]
gi|301169533|emb|CBW29134.1| alanyl-tRNA synthetase [Haemophilus influenzae 10810]
Length = 874
Score = 592 bits (1526), Expect = e-166, Method: Compositional matrix adjust.
Identities = 320/681 (46%), Positives = 440/681 (64%), Gaps = 50/681 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVPE DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 7 IRQSFLDFFHSKGHQVVESSSLVPENDPTLLFTNAGMNQFKDVFLGMDKRPYSRATTAQR 66
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI +AWE+ T GLP +
Sbjct: 67 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAINFAWEYLTSPQWLGLPKEK 126
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+ IWNK+VGVP E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 127 LWVTVYETDDEAYNIWNKDVGVPAERIIRIGDNKGAPYASDNFWAMGDTGPCGPCTEIFY 186
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N+ DG++E L + ++DTG+GLERI+
Sbjct: 187 D-HGDHIWGGPPGSPEEDGDRYIEIWNVVFMQFNRLADGTMEKLPRPSVDTGMGLERISA 245
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NYE D+ +I K +E+ + D TN +L++I DH+R+ YL++DGV P
Sbjct: 246 VLQHVNSNYEIDIFKTLIAKTAEIVGAT-----DLTNKSLRVIADHIRSCAYLIADGVIP 300
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN GRGYV+RR+IRRAVR G LLG K +F + I++ DVKA++
Sbjct: 301 SNEGRGYVLRRIIRRAVRHGHLLGAKE--------SFFYKLVPTLIDVMAEAGKDVKAKQ 352
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
+ + L+ EE +F +TLERG LLD+ ALS+ ++ LSG+ AF LYDT+GFP
Sbjct: 353 TNVEKLLRLEEEQFARTLERGLSLLDE----ALSQVKDG----ILSGEVAFKLYDTYGFP 404
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGY 515
+++T +V E +++D + FD EME QR ++QAA + VD ++ + +T+F GY
Sbjct: 405 LDLTADVCRERNITIDEQAFDREMEAQRTRAQAAS---QFGVDYNS-VIRVDGETKFEGY 460
Query: 516 DTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
+ ++A + +L +GK V + G V+L TPFYAESGGQIGD G+L + Q
Sbjct: 461 TEVESQAKITALFYDGKSVESIEAGQSAVVILENTPFYAESGGQIGDSGYL------SAQ 514
Query: 576 TAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAAL 635
VKD +K G VF H G + +G L+VG+ V AIVD K R ++H+ATHLL AAL
Sbjct: 515 GVTFNVKDTQK-YGQVFGHIGELTQGSLKVGQSVNAIVDAKRRHNTSLNHSATHLLHAAL 573
Query: 636 KKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALD 695
++++G Q GSLV+ LRFDF + +L EIE L+N I +QT +M +D
Sbjct: 574 RQILGLHVVQKGSLVSDKALRFDFAQPEAITKEQLSEIETLVNQKIRANFPVQTDIMDID 633
Query: 696 DAKRAGAIAMFGEKYGEQVKI 716
AK GA+A+FGEKYG++V++
Sbjct: 634 SAKAKGAMALFGEKYGDKVRV 654
>gi|417846199|ref|ZP_12492211.1| Alanyl-tRNA synthetase [Haemophilus haemolyticus M21639]
gi|341953218|gb|EGT79730.1| Alanyl-tRNA synthetase [Haemophilus haemolyticus M21639]
Length = 874
Score = 592 bits (1526), Expect = e-166, Method: Compositional matrix adjust.
Identities = 320/681 (46%), Positives = 435/681 (63%), Gaps = 50/681 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVPE DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 7 IRQSFLDFFHSKGHQVVESSSLVPENDPTLLFTNAGMNQFKDVFLGMDKRPYSRATTAQR 66
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AI +AWE+ T GLP +
Sbjct: 67 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAINFAWEYLTSPQWLGLPKEK 126
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+ IWNKEVGVP E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 127 LWVTVYETDDEAYNIWNKEVGVPAERIIRIGDNKGTPYASDNFWAMGDTGPCGPCTEIFY 186
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N+ DG++E L + ++DTG+GLERI+
Sbjct: 187 D-HGDHIWGGPPGSPEEDGDRYIEIWNVVFMQFNRLADGTMEKLPRPSVDTGMGLERISA 245
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NYE D+ +I K +E+ + D +N +L++I DH+R+ YL++DGV P
Sbjct: 246 VLQHVNSNYEIDIFKTLIAKTAEVVGTT-----DLSNKSLRVIADHIRSCAYLIADGVIP 300
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN GRGYV+RR+IRRAVR G LLG K AF + IE+ DVKA++
Sbjct: 301 SNEGRGYVLRRIIRRAVRHGHLLGAKE--------AFFYKLVPTLIEVMAEAGKDVKAKQ 352
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
+ + L+ EE +F +TLERG LLD+ LA LSG+ AF LYDT+GFP
Sbjct: 353 VNVEKLLRLEEEQFARTLERGLSLLDEALAQVKDGV--------LSGEVAFKLYDTYGFP 404
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGY 515
+++T +V E +++D + FD EME QR ++QAA + VD ++ + +T+F GY
Sbjct: 405 LDLTADVCRERNITIDEQAFDREMEAQRTRAQAAS---QFGVDYNS-IIRVDGETKFEGY 460
Query: 516 DTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
+ ++A + +L +GK V + G V+L TPFYAESGGQIGD G+L + Q
Sbjct: 461 TEVESQAKITALFYDGKSVESIEAGQSAVVILENTPFYAESGGQIGDSGYL------SAQ 514
Query: 576 TAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAAL 635
VKD +K G VF H G + +G L++G+ V AIVD + R ++H+ATHLL AAL
Sbjct: 515 GVTFNVKDTQK-YGQVFGHIGELTQGSLKIGQSVNAIVDAERRHNTSLNHSATHLLHAAL 573
Query: 636 KKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALD 695
++V+GQ Q GSLV+ LRFDF + +L +IE L+N I +QT +M +D
Sbjct: 574 RQVLGQHVVQKGSLVSDKALRFDFAQPEAITKEQLTQIETLVNQKIRANFPVQTDIMDID 633
Query: 696 DAKRAGAIAMFGEKYGEQVKI 716
AK GA+A+FGEKYG+ V++
Sbjct: 634 SAKAKGAMALFGEKYGDNVRV 654
>gi|417842286|ref|ZP_12488380.1| Alanyl-tRNA synthetase [Haemophilus haemolyticus M19501]
gi|341947501|gb|EGT74150.1| Alanyl-tRNA synthetase [Haemophilus haemolyticus M19501]
Length = 874
Score = 592 bits (1526), Expect = e-166, Method: Compositional matrix adjust.
Identities = 320/680 (47%), Positives = 435/680 (63%), Gaps = 48/680 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVPE DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 7 IRQSFLDFFHSKGHQVVESSSLVPENDPTLLFTNAGMNQFKDVFLGMDKRPYSRATTAQR 66
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AI +AWE+ T GLP +
Sbjct: 67 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAINFAWEYLTSPQWLGLPKEK 126
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+ IWNKEVGVP E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 127 LWVTVYETDDEAYNIWNKEVGVPAERIIRIGDNKGAPYASDNFWAMGDTGPCGPCTEIFY 186
Query: 219 DF--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARI 276
D H G D R+IE +N+VFMQ+N+ DG++E L + ++DTG+GLERI+ +
Sbjct: 187 DHGEHIWGGPPGSPEEDGDRYIEIWNVVFMQFNRLADGTMEKLPRPSVDTGMGLERISAV 246
Query: 277 LQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPS 336
LQ V +NYE D+ +I K +E+ + D +N +L++I DH+R+ YL++DGV PS
Sbjct: 247 LQHVNSNYEIDIFKTLIAKTAEVVGTT-----DLSNKSLRVIADHIRSCAYLIADGVIPS 301
Query: 337 NIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQ 396
N GRGYV+RR+IRRAVR G LLG K AF + IE+ DVKA++
Sbjct: 302 NEGRGYVLRRIIRRAVRHGHLLGAKE--------AFFYKLVPTLIEVMAEAGKDVKAKQV 353
Query: 397 RILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPV 456
+ + L+ EE +F +TLERG LLD+ LA LSG+ AF LYDT+GFP+
Sbjct: 354 NVEKLLRLEEEQFARTLERGLSLLDEALAQVKDGV--------LSGEVAFKLYDTYGFPL 405
Query: 457 EITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYD 516
++T +V E +++D + FD EME QR ++QAA + VD ++ + +T+F GY
Sbjct: 406 DLTADVCRERNITIDEQAFDREMEAQRTRAQAAS---QFGVDYNS-VIRVDGETKFEGYT 461
Query: 517 TLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQT 576
+ ++A + +L +GK V + G V+L TPFYAESGGQIGD G+L + Q
Sbjct: 462 EVESQAKITALFYDGKSVESIEAGQSAFVILENTPFYAESGGQIGDSGYL------SAQG 515
Query: 577 AVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALK 636
VKD +K G VF H G + +G L+VG+ V AIVD + R ++H+ATHLL AAL+
Sbjct: 516 MTFNVKDTQK-YGQVFGHIGELTQGSLKVGQSVNAIVDAERRHNTSLNHSATHLLHAALR 574
Query: 637 KVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDD 696
+V+GQ Q GSLV+ LRFDF + +L +IE L+N I +QT +M +D
Sbjct: 575 QVLGQHVVQKGSLVSDKALRFDFAQPEAITKEQLTQIETLVNQKIRANFPVQTDIMDIDS 634
Query: 697 AKRAGAIAMFGEKYGEQVKI 716
AK GA+A+FGEKYG++V++
Sbjct: 635 AKAKGAMALFGEKYGDKVRV 654
>gi|145628290|ref|ZP_01784091.1| alanyl-tRNA synthetase [Haemophilus influenzae 22.1-21]
gi|145638384|ref|ZP_01793994.1| alanyl-tRNA synthetase [Haemophilus influenzae PittII]
gi|144980065|gb|EDJ89724.1| alanyl-tRNA synthetase [Haemophilus influenzae 22.1-21]
gi|145272713|gb|EDK12620.1| alanyl-tRNA synthetase [Haemophilus influenzae PittII]
gi|309751524|gb|ADO81508.1| Alanyl-tRNA synthetase [Haemophilus influenzae R2866]
Length = 874
Score = 592 bits (1526), Expect = e-166, Method: Compositional matrix adjust.
Identities = 319/681 (46%), Positives = 436/681 (64%), Gaps = 50/681 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVPE DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 7 IRQSFLDFFHSKGHQVVESSSLVPENDPTLLFTNAGMNQFKDVFLGMDKRPYSRATTAQR 66
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI +AWE+ T GLP +
Sbjct: 67 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAINFAWEYLTSPQWLGLPKEK 126
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+ IWNKEVGVP E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 127 LWVTVYETDDEAYNIWNKEVGVPAERIIRIGDNKGAPYASDNFWAMGDTGPCGPCTEIFY 186
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N+ DG++E L + ++DTG+GLERI+
Sbjct: 187 D-HGDHIWGGPPGSPEEDGDRYIEIWNVVFMQFNRLADGTMEKLPRPSVDTGMGLERISA 245
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NYE D+ +I K +E+ + D +N +L++I DH+R+ YL++DGV P
Sbjct: 246 VLQHVNSNYEIDIFKTLIAKTAEIVGAT-----DLSNKSLRVIADHIRSCAYLIADGVIP 300
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN GRGYV+RR+IRRAVR G LLG K +F + IE+ DVKA++
Sbjct: 301 SNEGRGYVLRRIIRRAVRHGHLLGAKE--------SFFYKLVPTLIEVMAEAGKDVKAKQ 352
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
+ + L+ EE +F +TLERG LLD+ LA LSG+ AF LYDT+GFP
Sbjct: 353 TNVEKLLRLEEEQFARTLERGLSLLDEALAQVKDDV--------LSGEVAFKLYDTYGFP 404
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGY 515
+++T +V E +++D + FD EME+QR ++QAA + VD ++ + +T+F GY
Sbjct: 405 LDLTADVCRERNITIDEQAFDREMESQRTRAQAAS---QFGVDYNS-VIRVDGETKFEGY 460
Query: 516 DTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
+ ++A + +L +GK V + G V+L TPFYAESGGQIGD G+L + Q
Sbjct: 461 TEVESQAKITALFHDGKSVESIEAGQSAVVILENTPFYAESGGQIGDSGYL------SAQ 514
Query: 576 TAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAAL 635
VKD +K G VF H G + +G L+VG+ V IVD K R ++H+ATHLL AAL
Sbjct: 515 GVTFNVKDTQK-YGQVFGHIGELTQGSLKVGQSVNTIVDAKRRHNTSLNHSATHLLHAAL 573
Query: 636 KKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALD 695
++++G Q GSLV+ LRFDF + +L EIE L+N I +QT +M +D
Sbjct: 574 RQILGLHVVQKGSLVSDKALRFDFAQPEAITKEQLSEIETLVNQKIRANFPVQTDIMDID 633
Query: 696 DAKRAGAIAMFGEKYGEQVKI 716
AK GA+A+FGEKYG++V++
Sbjct: 634 SAKAKGAMALFGEKYGDKVRV 654
>gi|419838909|ref|ZP_14362329.1| alanine--tRNA ligase [Haemophilus haemolyticus HK386]
gi|386910137|gb|EIJ74799.1| alanine--tRNA ligase [Haemophilus haemolyticus HK386]
Length = 874
Score = 592 bits (1526), Expect = e-166, Method: Compositional matrix adjust.
Identities = 320/681 (46%), Positives = 435/681 (63%), Gaps = 50/681 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVPE DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 7 IRQSFLDFFHSKGHQVVESSSLVPENDPTLLFTNAGMNQFKDVFLGMDKRPYSRATTAQR 66
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AI +AWE+ T GLP +
Sbjct: 67 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAINFAWEYLTSPQWLGLPKEK 126
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+ IWNKEVGVP E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 127 LWVTVYETDDEAYNIWNKEVGVPAERIIRIGDNKGAPYASDNFWAMGDTGPCGPCTEIFY 186
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N+ DG++E L + ++DTG+GLERI+
Sbjct: 187 D-HGDHIWGGPPGSPEEDGDRYIEIWNVVFMQFNRLADGTMEKLPRPSVDTGMGLERISA 245
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NYE D+ +I K +E+ + D +N +L++I DH+R+ YL++DGV P
Sbjct: 246 VLQHVNSNYEIDIFKTLIAKTAEVVGTT-----DLSNKSLRVIADHIRSCAYLIADGVIP 300
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN GRGYV+RR+IRRAVR G LLG K AF + IE+ DVKA++
Sbjct: 301 SNEGRGYVLRRIIRRAVRHGHLLGAKE--------AFFYKLVPTLIEVMAEAGKDVKAKQ 352
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
+ + L+ EE +F +TLERG LLD+ LA LSG+ AF LYDT+GFP
Sbjct: 353 VNVEKLLRLEEEQFARTLERGLSLLDEALAQVKDGV--------LSGEVAFKLYDTYGFP 404
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGY 515
+++T +V E +++D + FD EME QR ++QAA + VD ++ + +T+F GY
Sbjct: 405 LDLTADVCRERNITIDEQAFDREMEAQRTRAQAAS---QFGVDYNS-IIRVDGETKFEGY 460
Query: 516 DTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
+ ++A + +L +GK V + G V+L TPFYAESGGQIGD G+L + Q
Sbjct: 461 TEVESQAKITALFYDGKSVESIEAGQSAVVILENTPFYAESGGQIGDSGYL------SAQ 514
Query: 576 TAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAAL 635
VKD +K G VF H G + +G L+VG+ V A+VD + R ++H+ATHLL AAL
Sbjct: 515 GVTFNVKDTQK-YGQVFGHIGELTQGSLKVGQSVNAVVDAERRHNTSLNHSATHLLHAAL 573
Query: 636 KKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALD 695
++V+GQ Q GSLV+ LRFDF + +L +IE L+N I +QT +M +D
Sbjct: 574 RQVLGQHVVQKGSLVSDKALRFDFAQPEAITKEQLTQIETLVNQKIRANFPVQTDIMDID 633
Query: 696 DAKRAGAIAMFGEKYGEQVKI 716
AK GA+A+FGEKYG+ V++
Sbjct: 634 SAKAKGAMALFGEKYGDNVRV 654
>gi|333979437|ref|YP_004517382.1| alanyl-tRNA synthetase [Desulfotomaculum kuznetsovii DSM 6115]
gi|333822918|gb|AEG15581.1| alanyl-tRNA synthetase [Desulfotomaculum kuznetsovii DSM 6115]
Length = 878
Score = 592 bits (1525), Expect = e-166, Method: Compositional matrix adjust.
Identities = 316/675 (46%), Positives = 449/675 (66%), Gaps = 28/675 (4%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
+G IR++FL F+ +RGH++LPSASL+P DP++L T AGM+ FKP F G +V R
Sbjct: 2 TGKEIREKFLKFFEARGHRILPSASLIPTNDPSLLWTAAGMVPFKPYFTGAAKPEVRRVT 61
Query: 108 TSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
T Q+C+RT D+E+VGRT+RHHTFFEMLGNFSFGDYFK++AI WAWEF+T GLP +LW
Sbjct: 62 TCQKCLRTPDIESVGRTARHHTFFEMLGNFSFGDYFKEKAIPWAWEFTTRVLGLPEEKLW 121
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCS 227
IS+Y DDDEAF+IW++EVGVP E I RMG D NFW G GPCGPCSEIY D +RGC
Sbjct: 122 ISIYLDDDEAFDIWHREVGVPAERIVRMGKDTNFWEIG-VGPCGPCSEIYVDLGEERGCG 180
Query: 228 DVDLG---DDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNY 284
G D R++E +NLVF+Q+ + + G+ PL K IDTG+GLER+A +LQ VP+N+
Sbjct: 181 SAGCGVGCDCDRYLEIWNLVFIQFFRDEAGNYTPLASKGIDTGMGLERVASVLQGVPSNF 240
Query: 285 ETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVV 344
+TDL I+ + LA V Y + +T++ LK+I DH RA+ + +SDG PSN GRGYV+
Sbjct: 241 DTDLFREIMDFTAGLAGVKYG-AGSKTDMALKVIADHCRAVTFAISDGALPSNEGRGYVL 299
Query: 345 RRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKR 404
RRL+RRAVR GR+LG L FL +A I+ ++ A + +L+ ++
Sbjct: 300 RRLLRRAVRFGRVLG--------LHEPFLYQVAGAVIKQMAGAYPELPANQGHVLKIIRS 351
Query: 405 EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAE 464
EE RF +TL +G ++L++++ +A R +GS + G+DAF LYDT+GFP+E+T+E+A
Sbjct: 352 EEERFGETLAQGTEILNRLVQEA----RAAGSTV-IRGEDAFRLYDTYGFPLELTREMAA 406
Query: 465 EHGVSVDMKGFDIEMENQRRQSQAAHNAVK-LSVDDS--ADLAEKIPDTEFLGYDTLSAK 521
E G++VD + F ME QR +++ A + LS D+ L +K+ +T F+GYDTL A+
Sbjct: 407 EEGLTVDEEAFARAMEEQRERARRARQETEYLSEKDAFYQVLRDKLGETRFVGYDTLEAR 466
Query: 522 AIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEV 581
V +LL G+PV K G +VE +L+ TP YAESGGQ+ D+ + + V+V
Sbjct: 467 GKVLALLKEGRPVDKAVAGEEVEFILDITPCYAESGGQVSDHARVSAPE------LEVQV 520
Query: 582 KDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQ 641
+V + + + VH+G ++ GVL+ + +VD K R+ +H+ATHLL ALK+V+G
Sbjct: 521 LEVSRPVEGLIVHRGKVQNGVLKENDSILVVVDGKRRRDTARNHSATHLLHKALKEVLGP 580
Query: 642 ETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAG 701
+QAGSLV DRLRFDF + P+ EL IE ++N + + +QT +L++A+ G
Sbjct: 581 HVNQAGSLVEPDRLRFDFTHYAPVSPEELHRIEEMVNQAVLENLPVQTFFTSLEEAQAMG 640
Query: 702 AIAMFGEKYGEQVKI 716
A+A+FGEKYGEQV++
Sbjct: 641 AVALFGEKYGEQVRV 655
>gi|16272755|ref|NP_438974.1| alanyl-tRNA synthetase [Haemophilus influenzae Rd KW20]
gi|1174496|sp|P43815.1|SYA_HAEIN RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|1573826|gb|AAC22473.1| alanyl-tRNA synthetase (alaS) [Haemophilus influenzae Rd KW20]
Length = 874
Score = 592 bits (1525), Expect = e-166, Method: Compositional matrix adjust.
Identities = 319/681 (46%), Positives = 441/681 (64%), Gaps = 50/681 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVPE DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 7 IRQSFLDFFHSKGHQVVESSSLVPENDPTLLFTNAGMNQFKDVFLGMDKRPYSRATTAQR 66
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI +AWE+ T GLP +
Sbjct: 67 CVRPGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAINFAWEYLTSPQWLGLPKEK 126
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+ IWNK+VGVP E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 127 LWVTVYETDDEAYNIWNKDVGVPAERIIRIGDNKGSPYASDNFWAMGDTGPCGPCTEIFY 186
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N+ DG++E L + ++DTG+GLERI+
Sbjct: 187 D-HGDHIWGGPPGSPEEDGDRYIEIWNVVFMQFNRLADGTMEKLPRPSVDTGMGLERISA 245
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NYE D+ +I K +E+ + D TN +L++I DH+R+ YL++DGV P
Sbjct: 246 VLQHVNSNYEIDIFKTLIAKTAEIVGAT-----DLTNKSLRVIADHIRSCAYLIADGVIP 300
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN GRGYV+RR+IRRAVR G LLG K +F + I++ DVKA++
Sbjct: 301 SNEGRGYVLRRIIRRAVRHGHLLGAKE--------SFFYKLVPTLIDVMAEAGKDVKAKQ 352
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
+ + L+ EE +F +TLERG LLD+ ALS+ ++ LSG+ AF LYDT+GFP
Sbjct: 353 TNVEKLLRLEEEQFARTLERGLSLLDE----ALSQVKDG----ILSGEVAFKLYDTYGFP 404
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGY 515
+++T +V E +++D + FD +ME QR ++QAA + VD ++ + +T+F GY
Sbjct: 405 LDLTADVCRERNITIDEQAFDRKMEAQRTRAQAAS---QFGVDYNS-VIRVDGETKFEGY 460
Query: 516 DTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
+ ++A + +L +GK V + G V+L TPFYAESGGQIGD G+L + Q
Sbjct: 461 TEVESQAKITALFYDGKSVESIEAGQSAVVILENTPFYAESGGQIGDSGYL------STQ 514
Query: 576 TAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAAL 635
+ VKD +K G VF H G + +G L+VG+ V AIVD K R ++H+ATHLL AAL
Sbjct: 515 SVTFNVKDTQK-YGQVFGHIGELTQGSLKVGQSVNAIVDAKRRHNTSLNHSATHLLHAAL 573
Query: 636 KKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALD 695
++++G Q GSLV+ LRFDF + +L EIE L+N I +QT +M +D
Sbjct: 574 RQILGLHVVQKGSLVSDKALRFDFAQPEAITKEQLSEIETLVNQKIRANFPVQTDIMDID 633
Query: 696 DAKRAGAIAMFGEKYGEQVKI 716
AK GA+A+FGEKYG++V++
Sbjct: 634 SAKAKGAMALFGEKYGDKVRV 654
>gi|260581631|ref|ZP_05849428.1| alanyl-tRNA synthetase [Haemophilus influenzae NT127]
gi|260095224|gb|EEW79115.1| alanyl-tRNA synthetase [Haemophilus influenzae NT127]
Length = 874
Score = 592 bits (1525), Expect = e-166, Method: Compositional matrix adjust.
Identities = 319/681 (46%), Positives = 436/681 (64%), Gaps = 50/681 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVPE DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 7 IRQSFLDFFHSKGHQVVESSSLVPENDPTLLFTNAGMNQFKDVFLGMDKRPYSRATTAQR 66
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI +AWE+ T GLP +
Sbjct: 67 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAINFAWEYLTSPQWLGLPKEK 126
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+ IWNK+VGVP E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 127 LWVTVYETDDEAYNIWNKDVGVPAERIIRIGDNKGSPYASDNFWAMGDTGPCGPCTEIFY 186
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N+ DG++E L + ++DTG+GLERI+
Sbjct: 187 D-HGDHIWGGPPGSPEEDGDRYIEIWNVVFMQFNRLADGTMEKLPRPSVDTGMGLERISA 245
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NYE D+ +I K +E+ + D TN +L++I DH+R+ YL++DGV P
Sbjct: 246 VLQHVNSNYEIDIFKTLIAKTAEIVGAT-----DLTNKSLRVIADHIRSCAYLIADGVIP 300
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN GRGYV+RR+IRRAVR G LLG K +F + I++ DVKA++
Sbjct: 301 SNEGRGYVLRRIIRRAVRHGHLLGAKE--------SFFYKLVPTIIDVMAEAGKDVKAKQ 352
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
+ + L+ EE +F +TLERG LLD+ LA LSG+ AF LYDT+GFP
Sbjct: 353 VNVEKLLRLEEEQFARTLERGLNLLDEALAQVKDDV--------LSGEVAFKLYDTYGFP 404
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGY 515
+++T +V E +++D + FD EME QR ++QAA + VD ++ + +T+F GY
Sbjct: 405 LDLTADVCRERNITIDEQAFDREMEAQRTRAQAAS---QFGVDYNS-VIRVDGETKFEGY 460
Query: 516 DTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
+ ++A + +L +GK V + G V+L TPFYAESGGQIGD G+L + Q
Sbjct: 461 TEVESQAKITALFYDGKSVESIEAGQSAVVILENTPFYAESGGQIGDSGYL------SAQ 514
Query: 576 TAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAAL 635
VKD +K G VF H G + +G L+VG+ V AIVD K R ++H+ATHLL AAL
Sbjct: 515 GVTFNVKDTQK-YGQVFGHIGELTQGSLKVGQSVNAIVDAKRRHNTSLNHSATHLLHAAL 573
Query: 636 KKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALD 695
++++G Q GSLV+ LRFDF + +L EIE L+N I +QT +M +D
Sbjct: 574 RQILGLHVVQKGSLVSDKALRFDFAQPEAITKEQLSEIETLVNQKIRANFPVQTDIMDID 633
Query: 696 DAKRAGAIAMFGEKYGEQVKI 716
AK GA+A+FGEKYG++V++
Sbjct: 634 SAKAKGAMALFGEKYGDKVRV 654
>gi|114775361|ref|ZP_01450929.1| alanyl-tRNA synthetase [Mariprofundus ferrooxydans PV-1]
gi|114553472|gb|EAU55853.1| alanyl-tRNA synthetase [Mariprofundus ferrooxydans PV-1]
Length = 871
Score = 591 bits (1524), Expect = e-166, Method: Compositional matrix adjust.
Identities = 307/676 (45%), Positives = 445/676 (65%), Gaps = 33/676 (4%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IRK+FLD++A+ GH ++ S+SLVP DPT++ T AGM+QFK +FLG R A TSQ+
Sbjct: 6 IRKKFLDYFAAEGHTIVDSSSLVPHGDPTLMFTNAGMVQFKHVFLGNESRPYRTATTSQK 65
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AI++AW+F T E L RL+
Sbjct: 66 CVRAGGKHNDLENVGHTARHHTFFEMLGNFSFGDYFKHDAIRYAWQFLTGELKLDPARLF 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPD--RG 225
I+V+E+DDEA++IW KEVG+P + I R+GA DNFW+ G TGPCGPCSEI+YD D G
Sbjct: 126 ITVFEEDDEAYDIWTKEVGIPADRIARIGAKDNFWSMGDTGPCGPCSEIFYDHGADVWGG 185
Query: 226 CSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYE 285
D R+IE +NLVFMQY++ +DG+L PL ++DTG+GLER+A ++Q V NNY+
Sbjct: 186 PPGTAEEDGDRYIEIWNLVFMQYDRDEDGTLTPLPHPSVDTGMGLERVAAVMQGVHNNYD 245
Query: 286 TDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVR 345
DL +I A L V + ++++L+++ DHLR++ +LL+DGV PSN GRG+V+R
Sbjct: 246 IDLFARLIDAAGALTGVRMGD-DPVSDVSLRVLADHLRSVSFLLADGVLPSNEGRGFVLR 304
Query: 346 RLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAI-ELSTHIDSDVKAREQRILEELKR 404
R++RRA R GRLLG + AF+ + + + E+ H +++K + I + ++
Sbjct: 305 RILRRACRHGRLLG--------MYEAFIYKLVDALVAEMGDHF-AELKESQGNIEQVIRI 355
Query: 405 EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAE 464
EE RF++TL++G KL++Q A A + G++P G+ F LYDTFGFP ++T ++ +
Sbjct: 356 EEERFIKTLDKGLKLVEQAAASA----GKGGTIP---GETLFALYDTFGFPTDLTADILK 408
Query: 465 EHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSA--DLAEKIPDTEFLGYDTLSAKA 522
+S+DM GF+ ME QR +++AA S A +L E TEFLGYDTLS++
Sbjct: 409 GTDISLDMDGFERCMEEQRTRARAAWGGSGESALPKALFELREHHGPTEFLGYDTLSSEG 468
Query: 523 IVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVK 582
++ L+ +G+ V + G + ++ N+TPFYAESGGQ GD G + + A+ EV
Sbjct: 469 VITGLIRDGEAVDTLHAGEEGWLIANQTPFYAESGGQAGDTGLITIGD------AIFEVS 522
Query: 583 DVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQE 642
D +K L +FVH G + +G E G V VD R + +HTATHL+ A L+KV+G+
Sbjct: 523 DTRKMLSDLFVHTGKVVKGSFEAGSVVHFAVDEDRRAAIRRNHTATHLMHAVLRKVLGEH 582
Query: 643 TSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGA 702
QAGSLV RLRFDFN +P+ + E + IE +N I + ++TK+M+ D+A +GA
Sbjct: 583 VKQAGSLVNEQRLRFDFNHFKPVSEEERKVIEAEVNAAIWANDPVETKLMSQDEAVASGA 642
Query: 703 IAMFGEKYGEQVKISS 718
+A+FGEKYG++V++ S
Sbjct: 643 MALFGEKYGDEVRVVS 658
>gi|319775253|ref|YP_004137741.1| alanyl-tRNA synthetase [Haemophilus influenzae F3047]
gi|317449844|emb|CBY86053.1| alanyl-tRNA synthetase [Haemophilus influenzae F3047]
Length = 874
Score = 590 bits (1522), Expect = e-166, Method: Compositional matrix adjust.
Identities = 317/680 (46%), Positives = 440/680 (64%), Gaps = 48/680 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVPE DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 7 IRQSFLDFFHSKGHQVVESSSLVPENDPTLLFTNAGMNQFKDVFLGMDKRPYSRATTAQR 66
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI +AWE+ T GLP +
Sbjct: 67 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAINFAWEYLTSPQWLGLPKEK 126
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+ IWNK+VGVP E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 127 LWVTVYETDDEAYNIWNKDVGVPAERIIRIGDNKGAPYASDNFWAMGDTGPCGPCTEIFY 186
Query: 219 DF--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARI 276
D H G D R+IE +N+VFMQ+N+ DG++E L + ++DTG+GLERI+ +
Sbjct: 187 DHGNHIWGGPPGSPEEDGDRYIEIWNVVFMQFNRLADGTMEKLPRPSVDTGMGLERISAV 246
Query: 277 LQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPS 336
LQ V +NYE D+ +I K +E+ + D TN +L++I DH+R+ YL++DGV PS
Sbjct: 247 LQHVNSNYEIDIFKTLIAKTAEIVGAT-----DLTNKSLRVIADHIRSCAYLIADGVIPS 301
Query: 337 NIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQ 396
N GRGYV+RR+IRRAVR G LLG K +F + I++ DVKA++
Sbjct: 302 NEGRGYVLRRIIRRAVRHGHLLGAKE--------SFFYKLVPTLIDVMAEAGKDVKAKQT 353
Query: 397 RILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPV 456
+ + L+ EE +F +TLERG LLD+ ALS+ ++ LSG+ AF LYDT+GFP+
Sbjct: 354 NVEKLLRLEEEQFARTLERGLSLLDE----ALSQVKDG----ILSGEVAFKLYDTYGFPL 405
Query: 457 EITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYD 516
++T +V E +++D + FD +ME QR ++Q+A + VD ++ + +T+F GY
Sbjct: 406 DLTADVCRERNITIDEQAFDRKMEAQRTRAQSAS---QFGVDYNS-VIRVDGETKFEGYT 461
Query: 517 TLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQT 576
+ ++A + +L +GK V + G V+L TPFYAESGGQIGD G+L + Q+
Sbjct: 462 EVESQAKITALFYDGKSVESIEAGQSAVVILENTPFYAESGGQIGDSGYL------STQS 515
Query: 577 AVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALK 636
VKD +K G VF H G + +G L+VG+ V AIVD K R ++H+ATHLL AAL+
Sbjct: 516 VTFNVKDTQK-YGQVFGHIGELTQGSLKVGQSVNAIVDAKRRHNTSLNHSATHLLHAALR 574
Query: 637 KVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDD 696
+++G Q GSLV+ LRFDF + +L EIE L+N I +QT +M +D
Sbjct: 575 QILGLHVVQKGSLVSDKALRFDFAQPEAITKEQLSEIETLVNQKIRANFPVQTDIMDIDS 634
Query: 697 AKRAGAIAMFGEKYGEQVKI 716
AK GA+A+FGEKYG++V++
Sbjct: 635 AKAKGAMALFGEKYGDKVRV 654
>gi|291279844|ref|YP_003496679.1| alanyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
gi|290754546|dbj|BAI80923.1| alanyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
Length = 871
Score = 590 bits (1522), Expect = e-166, Method: Compositional matrix adjust.
Identities = 303/679 (44%), Positives = 453/679 (66%), Gaps = 36/679 (5%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
+G IR++FL ++ S+GH +PS+SLVP DPT+L T AGM QFK +FLG+ R RA
Sbjct: 2 TGKEIREKFLKYFESKGHTRVPSSSLVPHNDPTLLFTNAGMNQFKDVFLGREKRDYTRAC 61
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
+ Q+ +R ND+ENVGRT+RHHTFFEMLGNFSFGDYFKKEAI++AWEF T E LPA
Sbjct: 62 SCQKVVRAGGKHNDLENVGRTARHHTFFEMLGNFSFGDYFKKEAIEYAWEFLTKEINLPA 121
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPD 223
++L+I+VY+DDDEAFEIWNK +GVP + I RM DNFW G TGPCGPCSEI D P+
Sbjct: 122 DKLYITVYKDDDEAFEIWNKHIGVPADRIYRMDEKDNFWAMGDTGPCGPCSEILIDQGPE 181
Query: 224 RGCSDVDL---GDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKV 280
GC D D R +E +NLVFMQYN+ + G L PL + +IDTG+GLER+ ++QKV
Sbjct: 182 IGCGRADCDPYCDCDRHLELWNLVFMQYNRDESGKLNPLPKPSIDTGMGLERVTAVVQKV 241
Query: 281 PNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGR 340
P+N++TDLI PII+ A++L+N +Y N++ + +L++I DH RA +L+SDGV PSN GR
Sbjct: 242 PSNFDTDLIKPIIEYAAKLSNKNYG-DNEKDDTSLRVIADHARATTFLISDGVLPSNEGR 300
Query: 341 GYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILE 400
GYV+RR++RRA+R G++LG K +F + E + ++ ++ + +
Sbjct: 301 GYVLRRIMRRAMRHGKMLGFK--------ESFFYQVCEFVCDFMNDPYIELMDKKSYVSK 352
Query: 401 ELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITK 460
+K EE RF +TLE G K+ +++ L + +E+ +P G + F LYDT+GFPV++ +
Sbjct: 353 VVKFEEERFNKTLETGLKIAEEL----LEKYKENKEIP---GFEIFRLYDTYGFPVDLLQ 405
Query: 461 EVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPD---TEFLGYDT 517
++ E++G +D+ GFD EM+ Q+ +++ A S AD+ +K+ + TEF+GY+
Sbjct: 406 DIMEDNGYKLDLVGFDEEMKKQQERAKNAWAGSGESF--IADIYKKLENQFKTEFIGYEN 463
Query: 518 LSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTA 577
+++ V +++ + ++S+ S+ E++L++TPFY ESGGQ+GD G +Y +
Sbjct: 464 TKSESSVLAIVKDDNETQEISESSEFELILDKTPFYPESGGQVGDTGKIY------NENC 517
Query: 578 VVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKK 637
+EV D KK +G++ VHK + G ++ G +V A++D + R+ + +HTATHLL AL+
Sbjct: 518 NIEVLDCKK-VGNLIVHKSKLLSGKIKKGDKVTAVIDVEKRKNTERNHTATHLLHKALQM 576
Query: 638 VIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDA 697
V+G QAGSLVA DRLRFDF P+ D E+++IE L+N I + + +++A
Sbjct: 577 VLGDHVRQAGSLVAPDRLRFDFTHFAPVDDEEIKKIELLVNENIIKNIEVTKTIKPIEEA 636
Query: 698 KRAGAIAMFGEKYGEQVKI 716
+ GA+A+FGEKY ++V++
Sbjct: 637 IKEGAMALFGEKYDKEVRV 655
>gi|403253662|ref|ZP_10919963.1| alanyl-tRNA synthetase [Thermotoga sp. EMP]
gi|402811196|gb|EJX25684.1| alanyl-tRNA synthetase [Thermotoga sp. EMP]
Length = 863
Score = 590 bits (1522), Expect = e-166, Method: Compositional matrix adjust.
Identities = 306/672 (45%), Positives = 439/672 (65%), Gaps = 36/672 (5%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
+ + IR+ FL F+ +GHK+LPSASL+P+DP +L T+AGM+ FKPIF GKV R AT
Sbjct: 5 TSEEIREAFLKFFEKKGHKILPSASLIPDDPQLLFTVAGMVPFKPIFWGKVEPVYTRVAT 64
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
Q+C+RT D+ENVG+T RHHTFFEMLGNFSFGDYFK+EAI+WAWEF T G+P +LW+
Sbjct: 65 CQKCLRTVDIENVGKTPRHHTFFEMLGNFSFGDYFKEEAIEWAWEFLTQVLGVPEEKLWV 124
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWN-SGATGPCGPCSEIYYDFHPDRGCS 227
SVYE+D+EAF IWN+++G+P + I RMG +DNFW +G TGPCGP +EI+YD +GC
Sbjct: 125 SVYEEDEEAFRIWNEKIGLPEKKILRMGKEDNFWGPAGPTGPCGPDTEIFYDTGYLKGCP 184
Query: 228 D----VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNN 283
+ + RF+E +NLVF +Y + ++G L PL +KNIDTG GLER ++Q V +N
Sbjct: 185 EGEECTPANSEGRFVEIWNLVFTEYYQDEEGKLHPLPRKNIDTGAGLERFCAMMQGVYSN 244
Query: 284 YETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYV 343
++TDL PII + EL V Y ++++ ++++++I DH+RAI +L+S+GVFPSN GRGYV
Sbjct: 245 FDTDLFQPIINRIEELTGVGY-KTDEEKDVSIRVIADHIRAITFLISEGVFPSNEGRGYV 303
Query: 344 VRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELK 403
+RR+IRRA+R G LLG + FL I + +E + ++ E + E L
Sbjct: 304 LRRIIRRAMRHGILLG--------MSEPFLYRIVDAVVEKMGRVYPEIVRGEGMVKEVLS 355
Query: 404 REELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVA 463
EE RF++TLE+G K+ D+++ ++ +DAF LYDT+G P+E+T E+A
Sbjct: 356 AEENRFLKTLEQGMKVFDEIVEKK----------GKIDSEDAFRLYDTYGLPLELTLEIA 405
Query: 464 EEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPD---TEFLGYDTLSA 520
+E GV VD++ F+ ME Q+R+S+AA V+ + + EK+P TEF GY+ L
Sbjct: 406 KEKGVEVDVQEFNKYMEEQQRKSRAAMGDVEFA--RRYEYLEKLPKDFRTEFTGYEKLED 463
Query: 521 KAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVE 580
+ V + + + V + S+G+ VEV+ +RTPFYAE GGQ+ D G + G V E
Sbjct: 464 EGEVVLIARDDETVEEASEGT-VEVVFSRTPFYAEKGGQVSDTGTVKWKDGKALVEYVFE 522
Query: 581 VKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIG 640
+ V VH+ I +G L G++V VD K R+ +HTATHLL AALKKV+G
Sbjct: 523 ASE------GVIVHRIKILDGTLRRGQKVILRVDKKRREATMRNHTATHLLHAALKKVLG 576
Query: 641 QETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRA 700
QAGSLVA DRLRFDF + L E+E++E L+N WI +A ++ + + ++A ++
Sbjct: 577 DHVRQAGSLVAPDRLRFDFTHFKGLSSAEIEQVEDLVNEWIMEAIPVEVRYTSYEEAVKS 636
Query: 701 GAIAMFGEKYGE 712
G +A+F EKYG+
Sbjct: 637 GVVALFTEKYGD 648
>gi|329122821|ref|ZP_08251393.1| alanine--tRNA ligase [Haemophilus aegyptius ATCC 11116]
gi|327472085|gb|EGF17523.1| alanine--tRNA ligase [Haemophilus aegyptius ATCC 11116]
Length = 874
Score = 590 bits (1520), Expect = e-165, Method: Compositional matrix adjust.
Identities = 318/681 (46%), Positives = 440/681 (64%), Gaps = 50/681 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVPE DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 7 IRQSFLDFFHSKGHQVVESSSLVPENDPTLLFTNAGMNQFKDVFLGMDKRPYSRATTAQR 66
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AI +AWE+ T GLP +
Sbjct: 67 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKNDAINFAWEYLTSPQWLGLPKEK 126
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+ IWNK+VGVP E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 127 LWVTVYETDDEAYNIWNKDVGVPAERIIRIGDNKGAPYASDNFWAMGDTGPCGPCTEIFY 186
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N+ DG++E L + ++DTG+GLERI+
Sbjct: 187 D-HGDHIWGGPPGSPEEDGDRYIEIWNVVFMQFNRLADGTMEKLPRPSVDTGMGLERISA 245
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NYE D+ +I K +E+ + D TN +L++I DH+R+ YL++DGV P
Sbjct: 246 VLQHVNSNYEIDIFKTLIAKTAEIVGAT-----DLTNKSLRVIADHIRSCAYLIADGVIP 300
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN GRGYV+RR+IRRAVR G LLG K +F + I++ DVKA++
Sbjct: 301 SNEGRGYVLRRIIRRAVRHGHLLGAKE--------SFFYKLVPTLIDVMAEAGKDVKAKQ 352
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
+ + L+ EE +F +TLERG LLD+ ALS+ ++ LSG+ AF LYDT+GFP
Sbjct: 353 TNVEKLLRLEEEQFARTLERGLSLLDE----ALSQVKDG----ILSGEVAFKLYDTYGFP 404
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGY 515
+++T +V E ++++ + FD +ME QR ++QAA + VD ++ + +T+F GY
Sbjct: 405 LDLTADVCRERNITINEQAFDRKMEAQRTRAQAAS---QFGVDYNS-VIRVDGETKFEGY 460
Query: 516 DTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
+ ++A + +L +GK V + G V+L TPFYAESGGQIGD G+L + Q
Sbjct: 461 TEVESQAKITALFYDGKSVESIEAGQSAVVILENTPFYAESGGQIGDSGYL------STQ 514
Query: 576 TAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAAL 635
+ VKD +K G VF H G + +G L+VG+ V AIVD K R ++H+ATHLL AAL
Sbjct: 515 SVTFNVKDTQK-YGQVFGHIGELTQGSLKVGQSVNAIVDAKRRHNTSLNHSATHLLHAAL 573
Query: 636 KKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALD 695
++++G Q GSLV+ LRFDF + +L EIE L+N I +QT +M +D
Sbjct: 574 RQILGLHVVQKGSLVSDKALRFDFAQPEAITKEQLSEIETLVNQKIRANFPVQTDIMDID 633
Query: 696 DAKRAGAIAMFGEKYGEQVKI 716
AK GA+A+FGEKYG++V++
Sbjct: 634 SAKAKGAMALFGEKYGDKVRV 654
>gi|227498470|ref|ZP_03928616.1| alanyl-tRNA synthetase [Acidaminococcus sp. D21]
gi|352684579|ref|YP_004896564.1| alanyl-tRNA synthetase [Acidaminococcus intestini RyC-MR95]
gi|226903928|gb|EEH89846.1| alanyl-tRNA synthetase [Acidaminococcus sp. D21]
gi|350279234|gb|AEQ22424.1| alanyl-tRNA synthetase [Acidaminococcus intestini RyC-MR95]
Length = 874
Score = 590 bits (1520), Expect = e-165, Method: Compositional matrix adjust.
Identities = 310/676 (45%), Positives = 441/676 (65%), Gaps = 36/676 (5%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
+G+ IR+++LDF+ + GH VLPSASL+P +DPT+LL AGM FKP F GK+ PR
Sbjct: 5 TGNEIRQKYLDFFKAHGHLVLPSASLIPHDDPTLLLIGAGMAPFKPFFTGKMKPPSPRIT 64
Query: 108 TSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
T Q+C+RT+D+ENVGRT+RHHT+FEMLGNFSFGDYFKKE I WAWEF T E LPA++LW
Sbjct: 65 TCQKCVRTDDIENVGRTARHHTYFEMLGNFSFGDYFKKEVIPWAWEFLTKELELPADKLW 124
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCS 227
I++Y DDEA+ IW+ VGVP E I R+ +DNFW G +GPCGP SEI+ D D+GC
Sbjct: 125 ITIYPKDDEAYHIWHDVVGVPDERIVRL--EDNFWQIG-SGPCGPDSEIHIDLGADKGCG 181
Query: 228 DVDLG---DDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNY 284
+ G D RF+E +NLVF Q+N+ DG+ PLK KNIDTG GLER+A ++Q P+N+
Sbjct: 182 EPTCGPGCDCGRFLELWNLVFTQFNQNADGTYTPLKHKNIDTGAGLERLASVIQGKPSNF 241
Query: 285 ETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVV 344
ETDLIFPII+ A EL++ Y ++ +T+++LK++ DH R++ +++ DG+ PSN GRGYV+
Sbjct: 242 ETDLIFPIIELACELSHKKY-NADAKTDISLKVVADHARSLTFMIGDGILPSNEGRGYVL 300
Query: 345 RRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKR 404
RR++RRA+R GRLLGI+ G FL ++A+K I + +++ +++ I + +
Sbjct: 301 RRVLRRAIRHGRLLGIR--------GKFLAALADKVISMYGEHYTELVEKKEFIDKVIDM 352
Query: 405 EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAE 464
EE F+QTL +G LL++ +A + +E+ +V LSG DAF LYDTFGFP E+T E+ +
Sbjct: 353 EETSFLQTLSQGTDLLNEKIA---AMKKENKTV--LSGDDAFKLYDTFGFPWEVTDEILQ 407
Query: 465 EHGVSVDMKGFDIEMENQRRQSQAAHN--AVKLSVDDSADLAEKIPDTEFLGYDTLSAKA 522
E G+++D +GFD M +Q+ +++ A N + + D+ L E L D S +
Sbjct: 408 EQGMTMDKEGFDKAMASQKERARKARNDKEGRPVMYDTRSL-----HLEGLTVDEASKEG 462
Query: 523 IVESLLVNGK--PVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVE 580
+V +L G+ P+ + G + ++L T F+AE GGQ+GD G L G + +
Sbjct: 463 VVAALYQEGETTPIKEGHTGDSLAIILTNTAFHAEGGGQLGDTGRLISDAG------IFD 516
Query: 581 VKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIG 640
V++ KK +H GT+ G VG+ V V+ + +HTATHLL AALKKV+G
Sbjct: 517 VENTKKLPDGTTIHLGTVESGAFSVGQAVTFEVNLDRKADIARNHTATHLLHAALKKVLG 576
Query: 641 QETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRA 700
+QAGS V DRLRFDF+ PL E+ +E L+N I DA +Q +D AK
Sbjct: 577 GHVNQAGSYVGPDRLRFDFSHFSPLTAEEVSRVEDLVNEAILDAVDVQISEEDIDKAKEM 636
Query: 701 GAIAMFGEKYGEQVKI 716
GA+A+FGEKYG+ V++
Sbjct: 637 GAMALFGEKYGKIVRV 652
>gi|284048255|ref|YP_003398594.1| alanyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
gi|283952476|gb|ADB47279.1| alanyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
Length = 875
Score = 589 bits (1519), Expect = e-165, Method: Compositional matrix adjust.
Identities = 314/683 (45%), Positives = 439/683 (64%), Gaps = 49/683 (7%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
SG+ IR+++LDF+ RGH VLPSASL+P +DPT+LL AGM FKP F GKV R
Sbjct: 5 SGNEIRQKYLDFFKERGHLVLPSASLIPHDDPTLLLIGAGMAPFKPYFTGKVKPPATRIT 64
Query: 108 TSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
T Q+C+RT D+ENVGRT+RHHT+FEMLGNFSFGDYFKKE I WAWEF T LPA++LW
Sbjct: 65 TCQKCVRTGDIENVGRTARHHTYFEMLGNFSFGDYFKKEVIPWAWEFLTKVLELPADKLW 124
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCS 227
I+VY D EA+++W+ GVP E I ++ +DN+W + GPCGP SEI+ D +RGC
Sbjct: 125 ITVYPKDQEAYDLWHDVCGVPAERIVKL--EDNWWEITSGGPCGPDSEIHIDLGEERGCG 182
Query: 228 DVDLG---DDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNY 284
D G D RF+E +NLVF QYNK+ DGS PL+ KNIDTGLGLER+A +LQ P+N+
Sbjct: 183 SPDCGPGCDCGRFLELWNLVFTQYNKEPDGSYTPLQHKNIDTGLGLERVASVLQNKPSNF 242
Query: 285 ETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVV 344
ETDLIFPII+ A ++ +Y ++ + +++LK+I DH R++ +++ DG+ PSN GRGY++
Sbjct: 243 ETDLIFPIIEYACRVSGKTY-NADPKDDVSLKVIADHARSVTFMIGDGILPSNEGRGYIL 301
Query: 345 RRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKR 404
RR++RRA+R GRLLGI+ + FL A+ I++ +D++ ++ I + +
Sbjct: 302 RRVLRRAIRHGRLLGIRKE--------FLVGAADLVIDMYGDHYTDLREKKSYIEKVIAM 353
Query: 405 EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAE 464
EE F+QTLE+G LL+Q + DA+ R++GS L+G+DAF LYDTFGFP E+T+E+ E
Sbjct: 354 EENSFLQTLEQGTDLLNQKI-DAM---RKAGSTV-LNGEDAFQLYDTFGFPWELTEEILE 408
Query: 465 EHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTLSAKAIV 524
E G ++D +GF+ ME QR ++++A N + + +T L TL+ V
Sbjct: 409 EQGFTMDKEGFEKAMEAQRERARSARN--------DKEGKPVLYETRHLKLGTLT----V 456
Query: 525 ESLLVNGK-----------PVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTN 573
+ NGK P+ G ++ V+L T F+AE GGQ+GD G L +G
Sbjct: 457 DEASKNGKVAAIFPAHDTQPIQNAKSGDELAVILTNTAFHAEGGGQLGDTGRLVSDKG-- 514
Query: 574 QQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQA 633
+ V D KK + GT+ +G L VG EVE V+ K R +HTATHLL A
Sbjct: 515 ----IFNVTDTKKLPDGYTIQLGTLEQGTLSVGDEVEFEVNLKRRADIARNHTATHLLHA 570
Query: 634 ALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMA 693
ALK+V+G +QAGS V DRLRFDF+ PL + EL ++E ++N I DA ++
Sbjct: 571 ALKQVLGSHVNQAGSYVGPDRLRFDFSHFSPLTEEELAQVEDIVNEKILDAVDVEISQQE 630
Query: 694 LDDAKRAGAIAMFGEKYGEQVKI 716
L+ A+ GA+A+FGEKYG+ V++
Sbjct: 631 LEKAREMGAMALFGEKYGKIVRV 653
>gi|170289222|ref|YP_001739460.1| alanyl-tRNA synthetase [Thermotoga sp. RQ2]
gi|205830279|sp|B1LBS9.1|SYA_THESQ RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|170176725|gb|ACB09777.1| alanyl-tRNA synthetase [Thermotoga sp. RQ2]
Length = 863
Score = 589 bits (1519), Expect = e-165, Method: Compositional matrix adjust.
Identities = 305/672 (45%), Positives = 438/672 (65%), Gaps = 36/672 (5%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
+ + IR+ FL F+ +GHK+LPSASL+P+DP +L T+AGM+ FKPIF GKV R AT
Sbjct: 5 TSEEIREAFLKFFEKKGHKILPSASLIPDDPQLLFTVAGMVPFKPIFWGKVEPVYTRVAT 64
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
Q+C+RT D+ENVG+T RHHTFFEMLGNFSFGDYFK+EAI+WAWEF T G+P +LW+
Sbjct: 65 CQKCLRTVDIENVGKTPRHHTFFEMLGNFSFGDYFKEEAIEWAWEFLTQVLGVPEEKLWV 124
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWN-SGATGPCGPCSEIYYDFHPDRGCS 227
SVYE+D+EAF IWN+++G+P + I RMG +DNFW +G TGPCGP +EI+YD +GC
Sbjct: 125 SVYEEDEEAFRIWNEKIGLPEKKILRMGKEDNFWGPAGPTGPCGPDTEIFYDTGYSKGCP 184
Query: 228 D----VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNN 283
+ + RF+E +NLVF +Y + ++G L PL +KNIDTG GLER ++Q V +N
Sbjct: 185 EGEECTPANSEGRFVEIWNLVFTEYYQDEEGKLHPLPRKNIDTGAGLERFCAMMQGVYSN 244
Query: 284 YETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYV 343
++TDL PII + EL V Y ++++ ++++++I DH+RAI +L+S+GVFPSN GRGYV
Sbjct: 245 FDTDLFQPIINRIEELTGVGY-KTDEEKDVSIRVIADHIRAITFLISEGVFPSNEGRGYV 303
Query: 344 VRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELK 403
+RR+IRRA+R G LLG + FL I + +E + ++ E + E L
Sbjct: 304 LRRIIRRAMRHGILLG--------MSEPFLYRIVDAVVEKMGKVYPEIVRGEGMVKEVLS 355
Query: 404 REELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVA 463
EE RF++TLE+G K+ D+++ ++ +DAF LYDT+G P+E+T E+A
Sbjct: 356 AEENRFLKTLEQGMKVFDEIVEKK----------GKIDSEDAFRLYDTYGLPLELTLEIA 405
Query: 464 EEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPD---TEFLGYDTLSA 520
+E GV VD++ F+ ME Q+R+S+AA V+ + + EK+P TEF GY+ L
Sbjct: 406 KEKGVEVDVQEFNKYMEEQQRKSRAAMGDVEFA--RRYEYLEKLPKDFRTEFTGYEKLED 463
Query: 521 KAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVE 580
+ V + + + V + S+G+ VEV+ +RTPFYAE GGQ+ D G + G V E
Sbjct: 464 EGEVVLIARDDETVEEASEGT-VEVVFSRTPFYAEKGGQVSDTGMVEWRDGKALVEYVFE 522
Query: 581 VKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIG 640
+ V V + I +G L G++V VD K R+ +HTATHLL AALKKV+G
Sbjct: 523 ASE------GVIVQRIKILDGTLRRGQKVVLRVDKKRRESTMRNHTATHLLHAALKKVLG 576
Query: 641 QETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRA 700
QAGSLVA DRLRFDF + L E+E++E L+N WI +A ++ + + ++A ++
Sbjct: 577 DHVRQAGSLVAPDRLRFDFTHFKGLSSAEIEQVEDLVNEWIMEAIPVEVRYTSYEEAVKS 636
Query: 701 GAIAMFGEKYGE 712
G +A+F EKYG+
Sbjct: 637 GVVALFTEKYGD 648
>gi|387771345|ref|ZP_10127511.1| alanine--tRNA ligase [Pasteurella bettyae CCUG 2042]
gi|386902550|gb|EIJ67390.1| alanine--tRNA ligase [Pasteurella bettyae CCUG 2042]
Length = 875
Score = 589 bits (1519), Expect = e-165, Method: Compositional matrix adjust.
Identities = 318/682 (46%), Positives = 442/682 (64%), Gaps = 51/682 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 7 IRQSFLDFFHSKGHQVVESSSLVPHNDPTLLFTNAGMNQFKDVFLGMDKRSYSRATTAQR 66
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEM+GNFSFGDYFK +AI +AWE+ T GLP +
Sbjct: 67 CVRAGGKHNDLENVGYTARHHTFFEMMGNFSFGDYFKHDAIHFAWEYLTGPQWLGLPKEK 126
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
L+++VYE DDEA+ IWN++VGVP EHI R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 127 LYVTVYETDDEAYNIWNQQVGVPAEHIIRIGDNKGAPYASDNFWAMGDTGPCGPCTEIFY 186
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N+ DG++EPL + ++DTG+GLER+
Sbjct: 187 D-HGDHIWGGLPGSPEEDGDRYIEVWNIVFMQFNRLVDGTMEPLPKPSVDTGMGLERMTA 245
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NYE D+ +IKK +E+ + D N +L++I DH+R+ YL++DGV P
Sbjct: 246 VLQHVNSNYEIDIFQTLIKKTAEIIG-----TKDLDNKSLRVIADHIRSCAYLIADGVIP 300
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN GRGYV+RR+IRRAVR G LLG + +F + ++ H + ++
Sbjct: 301 SNEGRGYVLRRIIRRAVRHGHLLGA--------QNSFFYKLVPTLAQVMGHAGEIITEKQ 352
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
I + LK EE +F +TLERG LLD DAL++ + + LSG AF LYDT+GFP
Sbjct: 353 ALIEKTLKAEEEQFARTLERGLSLLD----DALTQVKNN----MLSGDVAFKLYDTYGFP 404
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGY 515
+++T +V E +++D +GFD EM+ QR ++QA N +VD + +L + TEF GY
Sbjct: 405 LDLTADVCRERNIAIDEEGFDREMQAQRARAQANSN---FNVDYN-NLIKVDGKTEFKGY 460
Query: 516 DTLS-AKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQ 574
+T S ++A V +L +GK V + G + ++L+RTPFY ESGGQIGD G++ +
Sbjct: 461 ETTSLSEAKVVALFADGKSVDSIQSGENAVIILDRTPFYGESGGQIGDTGYI------ST 514
Query: 575 QTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAA 634
A + D +K G VF H G ++ G L VG V A VD + R+ +H+ATHLL AA
Sbjct: 515 DLASFRINDTQK-YGQVFGHIGQLQSGELSVGEIVSAQVDTERRKAITANHSATHLLHAA 573
Query: 635 LKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMAL 694
L+KV+G +Q GSLV+ LRFDF P+ T+L EIERL+N I D +L+ T +M +
Sbjct: 574 LRKVLGDHVAQKGSLVSDSALRFDFIQPEPISKTQLTEIERLVNRQIRDNDLVTTDIMDI 633
Query: 695 DDAKRAGAIAMFGEKYGEQVKI 716
+ AK+ GA+A+FGEKYG+ V++
Sbjct: 634 ESAKQKGAMALFGEKYGDIVRV 655
>gi|418465409|ref|ZP_13036346.1| alanyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
RhAA1]
gi|359756341|gb|EHK90500.1| alanyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
RhAA1]
Length = 874
Score = 589 bits (1518), Expect = e-165, Method: Compositional matrix adjust.
Identities = 322/687 (46%), Positives = 435/687 (63%), Gaps = 62/687 (9%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ +LDF+ S+GH+V+ S+SLVPE DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 7 IRQSYLDFFHSKGHQVVASSSLVPENDPTLLFTNAGMNQFKNVFLGLEKRPYSRATTAQR 66
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AI + WEF T GLP R
Sbjct: 67 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIHFGWEFLTSPQWLGLPKER 126
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE D+EA++IW+ E+G+ E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 127 LWVTVYETDEEAYKIWHDEIGIAAERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 186
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N+ DG++E L + ++DTG+GLERI+
Sbjct: 187 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRHADGTMEKLPKPSVDTGMGLERISA 245
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ D+ +I K +EL D TN +L++I DH+R+ YL+ DGV P
Sbjct: 246 VLQHVNSNYDIDIFQKLIAKTAELTG-----EKDLTNKSLRVIADHIRSCAYLIVDGVMP 300
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN GRGYV+RR+IRRAVR G LLG AF + IE+ +VK +
Sbjct: 301 SNEGRGYVLRRIIRRAVRHGHLLGATE--------AFFYKLVPTLIEVMAQAGEEVKKHQ 352
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
+ + L+ EE +F +TLERG LLD+ LA+ + LSG+ AF LYDT+GFP
Sbjct: 353 ATVEKLLRLEEEQFARTLERGLTLLDEALAEVKDKV--------LSGEVAFKLYDTYGFP 404
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAEKIPD 509
+++T +V E G+++D GF+ EMENQR ++Q+A +N V + VD +
Sbjct: 405 LDLTADVCRERGITIDEAGFEREMENQRLRAQSASQFGMDYNNV-IRVDGT--------- 454
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
T F GY A V +L +GKPV + G V+L+ TPFYAESGGQIGD G L
Sbjct: 455 TRFEGYTESETLAKVTALFHDGKPVDAIHDGQSAVVILDNTPFYAESGGQIGDIGRLE-G 513
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
G N +VKD +K G VF H G + +G L VG+ V A+VD RQR ++H+ATH
Sbjct: 514 NGFN-----FDVKDTQK-YGQVFGHIGELTQGSLSVGQSVNAVVDDVRRQRISLNHSATH 567
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
LL AAL++V+G+ +Q GSLV+ LRFDF H P+ +L E+ER++N + N +QT
Sbjct: 568 LLHAALRQVLGEHVAQKGSLVSDALLRFDFAQHEPISKAQLAEVERIVNQQVRANNPIQT 627
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKI 716
+M L+ AK GA+A+FGEKY EQV++
Sbjct: 628 DIMELEAAKAKGAMALFGEKYSEQVRV 654
>gi|392407137|ref|YP_006443745.1| alanyl-tRNA synthetase [Anaerobaculum mobile DSM 13181]
gi|390620273|gb|AFM21420.1| alanyl-tRNA synthetase [Anaerobaculum mobile DSM 13181]
Length = 880
Score = 589 bits (1518), Expect = e-165, Method: Compositional matrix adjust.
Identities = 305/673 (45%), Positives = 431/673 (64%), Gaps = 25/673 (3%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
SG +R+ FL ++ +GHK PS SLVP+DP++L TIAGM+ FKP FLG VPRA T
Sbjct: 5 SGRELRELFLSYFEQKGHKRYPSFSLVPDDPSLLFTIAGMVPFKPYFLGLKQPDVPRATT 64
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
SQ+C+RTND+ENVGRTSRHHTFFEMLGNFSFGDYFK+ I WAWEF T E G R+++
Sbjct: 65 SQKCLRTNDIENVGRTSRHHTFFEMLGNFSFGDYFKESVIPWAWEFLTKEIGFLPERMYV 124
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
++Y DDDEAF+IW+K VG+P + I RMG DNFW +G GPCGPCSE+ YD P+ C
Sbjct: 125 TIYLDDDEAFDIWHKTVGIPEDRIVRMGEKDNFWAAGPVGPCGPCSELIYDQGPEFSCGK 184
Query: 229 VDL---GDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYE 285
D D R++E +NLVFMQYN+ + G+L PL +KNIDTG+GLER+A ++Q V +++E
Sbjct: 185 PDCFVGCDCDRYLEIWNLVFMQYNRDEAGNLTPLPRKNIDTGMGLERLASVVQGVRSDFE 244
Query: 286 TDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVR 345
TDL P+I K S ++ V YA N + ++ +++I DH+RA+ ++++DGV PSN GRGYV+R
Sbjct: 245 TDLFMPMINKISNISGVEYAM-NKQHDMAMRVIADHVRALAFMIADGVLPSNEGRGYVLR 303
Query: 346 RLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKRE 405
RL+RRA R GRLLG LE FL + +EL ++ I + E
Sbjct: 304 RLLRRASRYGRLLG--------LERPFLVDLLPTLVELMADPYKELVENINVIESVINLE 355
Query: 406 ELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEE 465
E +F +TL++G L+++ +SR ++ G L G+ AF+LYDT+GFP+E+T+E+ +E
Sbjct: 356 EKKFSRTLDQGSALIEE----EISRLKKEGK-DVLPGETAFVLYDTYGFPLELTEEICQE 410
Query: 466 HGVSVDMKGFDIEMENQRRQSQAAHNAVKLSV--DDSADLAEKIPDTEFLGYDTLSAKAI 523
HG+ VD GF ME+QR ++AA + + + + L K +EF+GY+ +A
Sbjct: 411 HGIKVDRDGFIECMEHQREMARAASKQLSSATKKESYSSLLSKCGSSEFVGYELNEVRAK 470
Query: 524 VESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKD 583
V ++ + V + +G +VE+ L++TPFYAE GGQ+GD G++ +EV D
Sbjct: 471 VVAIFKESQEVYEAQEGEEVEIFLDKTPFYAERGGQVGDRGWM------ESSGCKLEVLD 524
Query: 584 VKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQET 643
L ++ HK +R G + +G EV+A VD R + HHT+TH++ AL +V+G
Sbjct: 525 TYFVLETLIAHKAKVRSGYVAIGDEVDARVDVTRRNAIRRHHTSTHIIHEALARVLGPHV 584
Query: 644 SQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAI 703
QAGS VA D LRFDFN P+ +L IER+ N + + +D+AKR GA
Sbjct: 585 RQAGSYVAPDYLRFDFNHFDPITREQLTAIERIANEVVQANIKVSIFETTMDEAKRIGAK 644
Query: 704 AMFGEKYGEQVKI 716
A F EKYGE+V++
Sbjct: 645 AFFDEKYGERVRV 657
>gi|402571513|ref|YP_006620856.1| alanyl-tRNA synthetase [Desulfosporosinus meridiei DSM 13257]
gi|402252710|gb|AFQ42985.1| alanyl-tRNA synthetase [Desulfosporosinus meridiei DSM 13257]
Length = 875
Score = 588 bits (1517), Expect = e-165, Method: Compositional matrix adjust.
Identities = 310/674 (45%), Positives = 428/674 (63%), Gaps = 29/674 (4%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
SG+ +R FL ++ ++GH +LPSASL+P +DPT+LLT+AGM+ FKP F +V +PRA
Sbjct: 3 SGNELRDMFLKYFEAKGHTILPSASLIPKDDPTLLLTVAGMVPFKPYFQRQVEPPIPRAT 62
Query: 108 TSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
T+Q+C+RT D+E VG+T+RHHT+FEMLGNFSFGDYFKKEAI WAWE+ T LP +LW
Sbjct: 63 TAQKCVRTPDLEEVGKTARHHTYFEMLGNFSFGDYFKKEAIPWAWEYITTVLKLPVEKLW 122
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCS 227
I++Y +D EA EIW K GV + I +G +NFW +G TGPCGPCSEIY D RGC
Sbjct: 123 ITIYPEDIEAREIWEK-AGVKSDRI--VGDPENFWAAGPTGPCGPCSEIYVDLGVARGCG 179
Query: 228 D--VDLGDDT-RFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNY 284
+G D RF+E +NLVFMQYN+ + G L PL ++NIDTG+GLERIA ++Q V N+
Sbjct: 180 KPGCAIGCDCDRFLEIWNLVFMQYNRDEAGVLTPLPKQNIDTGMGLERIASVMQGVETNF 239
Query: 285 ETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVV 344
+TDL PII + LA V Y + N + +L LK++ DH+RA+ ++LSDG+ P+N GRGYV+
Sbjct: 240 DTDLFRPIIDHVAALAGVKY-KENAKNDLALKVVSDHVRAVSFMLSDGIRPNNEGRGYVL 298
Query: 345 RRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKR 404
RR++RRAVR +LLGI + LE AF I ++ H ++K E IL L
Sbjct: 299 RRILRRAVRFAKLLGID---KPFLESAF--RIIQRDY---AHAYPELKENENFILSHLNL 350
Query: 405 EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAE 464
EE F TLE+G +LL + + + + LSG DAF LY+T+GFPVE+T+E+
Sbjct: 351 EEKNFQATLEQGTQLLQEKVRGLVEKGENV-----LSGTDAFYLYETYGFPVELTEEMLV 405
Query: 465 EHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDS--ADLAEKIPDTEFLGYDTLSAKA 522
E G+SVDM F+ E R +++ ++ V+ + + A+ + T F+GYD ++
Sbjct: 406 EQGLSVDMVTFETAAEEHRLRAKEQSQQMRAVVESTEVVEKAKSLGATPFVGYDKVALST 465
Query: 523 IVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVK 582
+E L V+GK V +G +V V L TPFYAESGGQ+ D G + + A V
Sbjct: 466 RIEGLFVSGKEVQDAGEGEEVLVFLTETPFYAESGGQVSDVGLIRTPR------AEARVL 519
Query: 583 DVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQE 642
DVKK + H+ ++ GV VG VE +D R HH+ATHLLQ+AL+ V+G+
Sbjct: 520 DVKKGVTGTLYHRVEVKTGVFHVGEPVEVEIDNTDRLATTRHHSATHLLQSALRSVLGEH 579
Query: 643 TSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGA 702
QAGSLV+ +RLRFDF PL L +E LIN + ++ M+L +AK +GA
Sbjct: 580 VQQAGSLVSPERLRFDFTHFSPLTPDSLRAVEGLINEAVLKNMPVKATEMSLKEAKESGA 639
Query: 703 IAMFGEKYGEQVKI 716
A+FGEKYGE V++
Sbjct: 640 TALFGEKYGESVRV 653
>gi|145630561|ref|ZP_01786341.1| alanyl-tRNA synthetase [Haemophilus influenzae R3021]
gi|144983951|gb|EDJ91393.1| alanyl-tRNA synthetase [Haemophilus influenzae R3021]
Length = 874
Score = 588 bits (1516), Expect = e-165, Method: Compositional matrix adjust.
Identities = 320/681 (46%), Positives = 440/681 (64%), Gaps = 50/681 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVPE DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 7 IRQSFLDFFHSKGHQVVESSSLVPENDPTLLFTNAGMNQFKDVFLGMDKRPYSRATTAQR 66
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI +AWE+ T GLP +
Sbjct: 67 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAINFAWEYLTSPQWLGLPKEK 126
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+ IWNK+VGVP E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 127 LWVTVYETDDEAYNIWNKDVGVPAERIIRIGDNKGSPYASDNFWAMGDTGPCGPCTEIFY 186
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N+ DG++E L + ++DTG+GLERI+
Sbjct: 187 D-HGDHIWGGPPGSPEEDGDRYIEIWNVVFMQFNRLADGTMEKLPRPSVDTGMGLERISA 245
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NYE D+ +I K +E+ + D TN +L++I DH+R+ YL++DGV P
Sbjct: 246 VLQHVNSNYEIDIFKTLIAKTAEIVGTT-----DLTNKSLRVIADHIRSCAYLIADGVIP 300
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN GRGYV+RR+IRRAVR G LLG K +F + I++ DVKA++
Sbjct: 301 SNEGRGYVLRRIIRRAVRHGHLLGAKE--------SFFYKLVPTLIDVMAEAGKDVKAKQ 352
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
+ + L+ EE +F +TLERG LLD+ ALS+ ++ LSG+ AF LYDT+GFP
Sbjct: 353 TNVEKLLRLEEEQFARTLERGLSLLDE----ALSQVKDG----ILSGEVAFKLYDTYGFP 404
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGY 515
+++T +V E +++D + FD EME QR ++QAA + VD ++ + +T+F GY
Sbjct: 405 LDLTADVCRERNITIDEQAFDREMEAQRTRAQAAS---QFGVDYNS-VIRVDGETKFEGY 460
Query: 516 DTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
+ ++A + +L +GK V + G V+L TPFYA+SGGQIGD G+L TQG
Sbjct: 461 TEVESQAKITALFYDGKSVESIEAGQSAVVILENTPFYAKSGGQIGDSGYLS-TQGV--- 516
Query: 576 TAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAAL 635
VKD +K G VF H G + +G L+VG+ V AIVD K ++H+ATHLL AAL
Sbjct: 517 --TFNVKDTQK-YGQVFGHIGELTQGSLKVGQSVNAIVDAKRLHNTSLNHSATHLLHAAL 573
Query: 636 KKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALD 695
++++G Q GSLV+ LRFDF + +L EIE L+N I +QT +M +D
Sbjct: 574 RQILGLHVVQKGSLVSDKALRFDFAQPEAITKEQLSEIETLVNQKIRANFPVQTDIMDID 633
Query: 696 DAKRAGAIAMFGEKYGEQVKI 716
AK GA+A+FGEKYG++V++
Sbjct: 634 SAKAKGAMALFGEKYGDKVRV 654
>gi|416053579|ref|ZP_11578934.1| alanyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype e str. SC1083]
gi|347990917|gb|EGY32433.1| alanyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype e str. SC1083]
Length = 874
Score = 588 bits (1516), Expect = e-165, Method: Compositional matrix adjust.
Identities = 321/687 (46%), Positives = 435/687 (63%), Gaps = 62/687 (9%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ +LDF+ S+GH+V+ S+SLVPE DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 7 IRQSYLDFFHSKGHQVVASSSLVPENDPTLLFTNAGMNQFKNVFLGLEKRPYSRATTAQR 66
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AI + WEF T GLP R
Sbjct: 67 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIHFGWEFLTSPQWLGLPKER 126
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE D+EA++IW+ E+G+ E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 127 LWVTVYETDEEAYKIWHDEIGIAAERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 186
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N+ DG++E L + ++DTG+GLERI+
Sbjct: 187 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRHADGTMEKLPKPSVDTGMGLERISA 245
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ D+ +I K +EL D TN +L++I DH+R+ YL+ DGV P
Sbjct: 246 VLQHVNSNYDIDIFQKLIAKTAELTG-----EKDLTNKSLRVIADHIRSCAYLIVDGVMP 300
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN GRGYV+RR+IRRAVR G LLG AF + IE+ +VK +
Sbjct: 301 SNEGRGYVLRRIIRRAVRHGHLLGATE--------AFFYKLVPTLIEVMAQAGEEVKKHQ 352
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
+ + L+ EE +F +TLERG LLD+ LA+ + LSG+ AF LYDT+GFP
Sbjct: 353 ATVEKLLRLEEEQFARTLERGLTLLDEALAEVKDKV--------LSGEVAFKLYDTYGFP 404
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAEKIPD 509
+++T +V E G+++D GF+ EMENQR ++Q+A +N V + VD +
Sbjct: 405 LDLTADVCRERGITIDEAGFEREMENQRLRAQSASQFGMDYNNV-IRVDGT--------- 454
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
T F GY A V +L +GKPV + G V+L+ TPFYAESGGQIGD G L
Sbjct: 455 TRFEGYTESETLAKVTALFHDGKPVDAIHAGQSAVVILDNTPFYAESGGQIGDIGRLE-G 513
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
G N +VKD +K G VF H G + +G L VG+ V A+VD RQR ++H+ATH
Sbjct: 514 NGFN-----FDVKDTQK-YGQVFGHIGELTQGSLSVGQSVNAVVDDVRRQRISLNHSATH 567
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
LL AAL++V+G+ +Q GSLV+ LRFDF H P+ +L E+ER++N + N +QT
Sbjct: 568 LLHAALRQVLGEHVAQKGSLVSDALLRFDFAQHEPISKAQLAEVERIVNQQVRANNPIQT 627
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKI 716
+M L+ AK GA+A+FGEKY +QV++
Sbjct: 628 DIMELEAAKAKGAMALFGEKYSDQVRV 654
>gi|319897692|ref|YP_004135889.1| alanyl-tRNA synthetase [Haemophilus influenzae F3031]
gi|317433198|emb|CBY81572.1| alanyl-tRNA synthetase [Haemophilus influenzae F3031]
Length = 874
Score = 588 bits (1516), Expect = e-165, Method: Compositional matrix adjust.
Identities = 319/681 (46%), Positives = 438/681 (64%), Gaps = 50/681 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVPE DPT+L AGM QFK +FLG R RA T+QR
Sbjct: 7 IRQSFLDFFHSKGHQVVESSSLVPENDPTLLFANAGMNQFKDVFLGMDKRPYSRATTAQR 66
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI +AWE+ T GLP +
Sbjct: 67 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAINFAWEYLTSPQWLGLPKEK 126
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+ IWNK+VGVP E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 127 LWVTVYETDDEAYNIWNKDVGVPAERIIRIGDNKGAPYASDNFWAMGDTGPCGPCTEIFY 186
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N+ DG++E L + ++DTG+GLERI+
Sbjct: 187 D-HGDHIWGGPPGSPEEDGDRYIEIWNVVFMQFNRLADGTMEKLPRPSVDTGMGLERISA 245
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NYE D+ I K +E+ + D TN +L++I DH+R+ YL++DGV P
Sbjct: 246 VLQHVNSNYEIDIFKTFIAKTAEIVGAT-----DLTNKSLRVIADHIRSCAYLIADGVIP 300
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN GRGYV+RR+IRRAVR G LLG K +F + IE+ DVKA++
Sbjct: 301 SNEGRGYVLRRIIRRAVRHGHLLGAKE--------SFFYKLVPTLIEVMAEAGKDVKAKQ 352
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
+ + L+ EE +F +TLERG LLD+ ALS+ ++ LSG+ AF LYDT+GFP
Sbjct: 353 TNVEKLLRLEEEQFARTLERGLSLLDE----ALSQVKDG----ILSGEVAFKLYDTYGFP 404
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGY 515
+++T +V E +++D + FD EME QR ++Q+A + VD ++ + +T+F GY
Sbjct: 405 LDLTADVCRERNITIDEQAFDREMEAQRTRAQSAS---QFGVDYNS-VIRVDGETKFEGY 460
Query: 516 DTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
+ ++A + +L +GK V + G V+L TPFYAESGGQIGD G+L + Q
Sbjct: 461 TEVESQAKITALFYDGKSVESIEAGQSAVVILENTPFYAESGGQIGDSGYL------SAQ 514
Query: 576 TAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAAL 635
VKD +K G VF H G + +G L+VG+ V AIVD K R ++H+ATHLL AAL
Sbjct: 515 GVTFNVKDTQK-YGQVFGHIGELTQGSLKVGQSVNAIVDAKRRHNISLNHSATHLLHAAL 573
Query: 636 KKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALD 695
++++G Q GSLV+ LRFDF + +L EIE L+N I +QT +M +D
Sbjct: 574 RQILGLHVVQKGSLVSDKALRFDFAQPEAITKEQLSEIEILVNQKIRANFPVQTDIMDID 633
Query: 696 DAKRAGAIAMFGEKYGEQVKI 716
AK GA+A+FGEKYG++V++
Sbjct: 634 SAKAKGAMALFGEKYGDKVRV 654
>gi|261867354|ref|YP_003255276.1| alanyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
D11S-1]
gi|261412686|gb|ACX82057.1| alanyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
D11S-1]
Length = 874
Score = 587 bits (1513), Expect = e-165, Method: Compositional matrix adjust.
Identities = 318/681 (46%), Positives = 433/681 (63%), Gaps = 50/681 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ +LDF+ S+GH+V+ S+SLVPE DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 7 IRQSYLDFFHSKGHQVVASSSLVPENDPTLLFTNAGMNQFKNVFLGLEKRPYSRATTAQR 66
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI + WEF T GLP R
Sbjct: 67 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAIHFGWEFLTSPQWLGLPKER 126
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE D+EA++IW+ E+G+ E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 127 LWVTVYETDEEAYKIWHDEIGIVAERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 186
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N+ DG++E L + ++DTG+GLERI+
Sbjct: 187 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRHADGTMEKLPKPSVDTGMGLERISA 245
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ D+ +I K +EL D TN +L++I DH+R+ YL+ DGV P
Sbjct: 246 VLQHVNSNYDIDIFQKLIAKTAELTG-----EKDLTNKSLRVIADHIRSCAYLIVDGVVP 300
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN GRGYV+RR+IRRAVR G LLG AF + IE+ +VK +
Sbjct: 301 SNEGRGYVLRRIIRRAVRHGHLLGAAE--------AFFYKLVPTLIEVMAQAGEEVKKHQ 352
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
+ + L+ EE +F +TLERG LLD+ LA+ + LSG+ AF LYDT+GFP
Sbjct: 353 ATVEKLLRLEEEQFARTLERGLTLLDEALAEVKGKV--------LSGEVAFKLYDTYGFP 404
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGY 515
+++T +V E G+++D GF+ EMENQR ++Q+A D ++ T F GY
Sbjct: 405 LDLTADVCRERGITIDEAGFEREMENQRLRAQSASQFGM----DYNNVIRVDGITRFEGY 460
Query: 516 DTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
A V +L +GKPV +S G V+L+ TPFYAESGGQIGD G L G N
Sbjct: 461 TESETLAKVTALFHDGKPVDTISSGQSAVVILDNTPFYAESGGQIGDIGRLE-GNGFN-- 517
Query: 576 TAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAAL 635
+VKD +K G VF H G + +G L VG+ V A+VD RQR ++H+ATHLL AAL
Sbjct: 518 ---FDVKDTQK-YGQVFGHIGELTQGSLSVGQSVNAVVDEVRRQRISLNHSATHLLHAAL 573
Query: 636 KKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALD 695
++V+G+ +Q GSLV+ LRFDF H P+ +L E+ER++N + N ++T +M L+
Sbjct: 574 RQVLGEHVAQKGSLVSDALLRFDFAQHEPISKAQLAEVERIVNQQVRANNPIKTDIMELE 633
Query: 696 DAKRAGAIAMFGEKYGEQVKI 716
AK GA+A+FGEKY +QV++
Sbjct: 634 AAKAKGAMALFGEKYSDQVRV 654
>gi|365967158|ref|YP_004948720.1| alanyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
ANH9381]
gi|365746071|gb|AEW76976.1| alanyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
ANH9381]
Length = 874
Score = 587 bits (1513), Expect = e-165, Method: Compositional matrix adjust.
Identities = 318/681 (46%), Positives = 433/681 (63%), Gaps = 50/681 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ +LDF+ S+GH+V+ S+SLVPE DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 7 IRQSYLDFFHSKGHQVVASSSLVPENDPTLLFTNAGMNQFKNVFLGLEKRPYSRATTAQR 66
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI + WEF T GLP R
Sbjct: 67 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAIHFGWEFLTSPQWLGLPKER 126
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE D+EA++IW+ E+G+ E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 127 LWVTVYETDEEAYKIWHDEIGIVAERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 186
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N+ DG++E L + ++DTG+GLERI+
Sbjct: 187 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRHADGTMEKLPKPSVDTGMGLERISA 245
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ D+ +I K +EL D TN +L++I DH+R+ YL+ DGV P
Sbjct: 246 VLQHVNSNYDIDIFQKLIAKTAELTG-----EKDLTNKSLRVIADHIRSCAYLIVDGVVP 300
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN GRGYV+RR+IRRAVR G LLG AF + IE+ +VK +
Sbjct: 301 SNEGRGYVLRRIIRRAVRHGHLLGAAE--------AFFYKLVPTLIEVMAQAGEEVKKHQ 352
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
+ + L+ EE +F +TLERG LLD+ LA+ + LSG+ AF LYDT+GFP
Sbjct: 353 ATVEKLLRLEEEQFARTLERGLTLLDEALAEVKGKV--------LSGEVAFKLYDTYGFP 404
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGY 515
+++T +V E G+++D GF+ EMENQR ++Q+A D ++ T F GY
Sbjct: 405 LDLTADVCRERGITIDEAGFEREMENQRLRAQSASQFGM----DYNNVIRVDGITRFEGY 460
Query: 516 DTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
A V +L +GKPV +S G V+L+ TPFYAESGGQIGD G L G N
Sbjct: 461 TESETLAKVTALFHDGKPVDTISSGQSAVVILDNTPFYAESGGQIGDIGRLE-GNGFN-- 517
Query: 576 TAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAAL 635
+VKD +K G VF H G + +G L VG+ V A+VD RQR ++H+ATHLL AAL
Sbjct: 518 ---FDVKDTQK-YGQVFGHIGELTQGSLSVGQSVNAVVDEVRRQRISLNHSATHLLHAAL 573
Query: 636 KKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALD 695
++V+G+ +Q GSLV+ LRFDF H P+ +L E+ER++N + N ++T +M L+
Sbjct: 574 RQVLGEHVAQKGSLVSDALLRFDFAQHEPISKAQLAEVERIVNQQVRANNPIKTDIMELE 633
Query: 696 DAKRAGAIAMFGEKYGEQVKI 716
AK GA+A+FGEKY +QV++
Sbjct: 634 AAKAKGAMALFGEKYSDQVRV 654
>gi|296133407|ref|YP_003640654.1| alanyl-tRNA synthetase [Thermincola potens JR]
gi|296031985|gb|ADG82753.1| alanyl-tRNA synthetase [Thermincola potens JR]
Length = 884
Score = 587 bits (1513), Expect = e-165, Method: Compositional matrix adjust.
Identities = 307/680 (45%), Positives = 448/680 (65%), Gaps = 33/680 (4%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
+G+ IR++FL F+ ++GH ++ S+SLVP +DPT+L T AGM QFK +FLG R RA
Sbjct: 2 TGNEIREKFLKFFENKGHTIIASSSLVPHDDPTLLFTNAGMNQFKEVFLGLDRRPYKRAT 61
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
TSQ+C+R ND++ VGRT+RHHTFFEMLGNFSFGDYFK+EAI +AW+F T E GLP
Sbjct: 62 TSQKCVRAGGKHNDLDTVGRTARHHTFFEMLGNFSFGDYFKREAITYAWQFLTEELGLPK 121
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPD 223
+RL+ +VY DD+EA ++W + G+P E + R+G DNFW+ G TGPCGPCSE+ D +
Sbjct: 122 DRLYATVYRDDEEAAQLWQEIAGLPPERVIRLGEKDNFWSMGDTGPCGPCSEVLIDRGEE 181
Query: 224 RGCS--DVDLG--DDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQK 279
C+ + +G D R++E +NLVFMQYN+ + G + PL + +IDTG+GLERIA ++QK
Sbjct: 182 FKCAADNCAIGACDCDRWLEIWNLVFMQYNRDESGEMTPLPKPSIDTGMGLERIASVMQK 241
Query: 280 VPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIG 339
V +N++TDL PI+ K EL+ Y Q D ++I DH RA +L+SDGV PSN G
Sbjct: 242 VNSNFDTDLFKPIMAKVEELSGSVYYQ--DERGFPFRVIADHARACTFLISDGVLPSNEG 299
Query: 340 RGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRIL 399
RGYV+RR++RRAVR G++LGI E FL + +L +++ ++ +
Sbjct: 300 RGYVLRRILRRAVRFGKVLGI--------EKPFLYQMVGVVADLMGDAYPEIREKQTYVE 351
Query: 400 EELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEIT 459
+ +K EE RF +TL G +L+ ++ + R+S +SGQ+AFLLYDT+GFP+++T
Sbjct: 352 QVIKIEEERFHETLHEGMRLVSDIVEKVKAEGRQS-----ISGQEAFLLYDTYGFPLDLT 406
Query: 460 KEVAEEHGVSVDMKGFDIEMENQRRQSQAAHN--AVKLSVDDSADLAEKIPDTEFLGYDT 517
+++AEEHG++VD GF ME QR +++AA A+ + A++ +K+ TEF GY
Sbjct: 407 EDIAEEHGLTVDKDGFAAAMEEQRTRARAARQDEAMLAGQELYAEVGQKLGATEFTGYSE 466
Query: 518 LSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTA 577
L +A V +L+V+ + +V G VEV+++RT FY ESGGQ+GD G L +G A
Sbjct: 467 LETRANVVALIVDKEFRHEVRAGEQVEVIMDRTCFYGESGGQVGDRGILESNRG-----A 521
Query: 578 VVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKK 637
V++V D KK+ + VH GT+ + ++ G ++A VD + R++ +H+ THLL ALK+
Sbjct: 522 VIKVTDTKKTFNGLMVHLGTVEKDIVSFGDVMDARVDARRRKQIARNHSVTHLLHKALKE 581
Query: 638 VIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANL-LQTKVMALDD 696
V+G +QAGSLV +RLRFDF R + EL+++E +N I ANL + +LD+
Sbjct: 582 VLGDHVNQAGSLVEPERLRFDFTHFRAVTPEELQKVEDRVNEMI-LANLDVHAFETSLDE 640
Query: 697 AKRAGAIAMFGEKYGEQVKI 716
AK GA A+FGEKYGE+V++
Sbjct: 641 AKALGATALFGEKYGEKVRV 660
>gi|416048630|ref|ZP_11576368.1| alanyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype d str. I63B]
gi|347992447|gb|EGY33848.1| alanyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype d str. I63B]
Length = 874
Score = 586 bits (1510), Expect = e-164, Method: Compositional matrix adjust.
Identities = 317/681 (46%), Positives = 432/681 (63%), Gaps = 50/681 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ +LDF+ S+GH+V+ S+SLVPE DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 7 IRQSYLDFFHSKGHQVVASSSLVPENDPTLLFTNAGMNQFKNVFLGLEKRPYSRATTAQR 66
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI + WEF T GLP R
Sbjct: 67 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAIHFGWEFLTSPQWLGLPKER 126
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE D+EA++IW+ E+G+ E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 127 LWVTVYETDEEAYKIWHDEIGIAAERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 186
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N+ DG++E L + ++DTG+GLERI+
Sbjct: 187 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRHADGTMEKLPKPSVDTGMGLERISA 245
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ D+ +I K +EL D TN +L++I DH+R+ YL+ DGV P
Sbjct: 246 VLQHVNSNYDIDIFQKLIAKTAELTG-----EKDLTNKSLRVIADHIRSCAYLIVDGVVP 300
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN GRGYV+RR+IRRAVR G LLG AF + IE+ +VK +
Sbjct: 301 SNEGRGYVLRRIIRRAVRHGHLLGATE--------AFFYKLVPTLIEVMAQAGEEVKKHQ 352
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
+ + L+ EE +F +TLERG LLD+ LA+ + LSG+ AF LYDT+GFP
Sbjct: 353 ATVEKLLRLEEEQFARTLERGLTLLDEALAEVKGKV--------LSGEVAFKLYDTYGFP 404
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGY 515
+++T +V E G+++D GF+ EMENQR ++Q+A D ++ T F GY
Sbjct: 405 LDLTADVCRERGITIDEAGFEREMENQRLRAQSASQFGM----DYNNVIHVDGITRFEGY 460
Query: 516 DTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
A V +L +GKPV +S G V+L+ TPFYAESGGQIGD G L G N
Sbjct: 461 TESETLAKVTALFHDGKPVDTISAGQSAVVILDNTPFYAESGGQIGDIGRLE-GNGFN-- 517
Query: 576 TAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAAL 635
+VKD +K G VF H G + +G L VG+ V A+VD RQ ++H+ATHLL AAL
Sbjct: 518 ---FDVKDTQK-YGQVFGHIGELTQGSLSVGQSVNAVVDEVRRQHISLNHSATHLLHAAL 573
Query: 636 KKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALD 695
++V+G+ +Q GSLV+ LRFDF H P+ +L E+ER++N + N ++T +M L+
Sbjct: 574 RQVLGEHVAQKGSLVSDALLRFDFAQHEPISKAQLAEVERIVNQQVRANNPIKTNIMELE 633
Query: 696 DAKRAGAIAMFGEKYGEQVKI 716
AK GA+A+FGEKY +QV++
Sbjct: 634 AAKAKGAMALFGEKYSDQVRV 654
>gi|416067826|ref|ZP_11582508.1| alanyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype f str. D18P1]
gi|348001770|gb|EGY42502.1| alanyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype f str. D18P1]
Length = 874
Score = 586 bits (1510), Expect = e-164, Method: Compositional matrix adjust.
Identities = 317/681 (46%), Positives = 432/681 (63%), Gaps = 50/681 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ +LDF+ S+GH+V+ S+SLVPE DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 7 IRQSYLDFFHSKGHQVVASSSLVPENDPTLLFTNAGMNQFKNVFLGLEKRPYSRATTAQR 66
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI + WEF T GLP R
Sbjct: 67 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAIHFGWEFLTSPQWLGLPKER 126
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE D+EA++IW+ E+G+ E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 127 LWVTVYETDEEAYKIWHDEIGIAAERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 186
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N+ DG++E L + ++DTG+GLERI+
Sbjct: 187 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRHADGTMEKLPKPSVDTGMGLERISA 245
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ D+ +I K +EL D TN +L++I DH+R+ YL+ DGV P
Sbjct: 246 VLQHVNSNYDIDIFQKLIAKTAELTG-----EKDLTNKSLRVIADHIRSCAYLIVDGVVP 300
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN GRGYV+RR+IRRAVR G LLG AF + IE+ +VK +
Sbjct: 301 SNEGRGYVLRRIIRRAVRHGHLLGATE--------AFFYKLVPTLIEVMAQAGEEVKKHQ 352
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
+ + L+ EE +F +TLERG LLD+ LA+ + LSG+ AF LYDT+GFP
Sbjct: 353 ATVEKLLRLEEEQFARTLERGLTLLDEALAEVKGKV--------LSGEVAFKLYDTYGFP 404
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGY 515
+++T +V E G+++D GF+ EMENQR ++Q+A D ++ T F GY
Sbjct: 405 LDLTADVCRERGITIDEAGFEREMENQRLRAQSASQFGM----DYNNVIHVDGITRFEGY 460
Query: 516 DTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
A V +L +GKPV +S G V+L+ TPFYAESGGQIGD G L G N
Sbjct: 461 TESETLAKVTALFHDGKPVDTISAGQSAVVILDNTPFYAESGGQIGDIGRLE-GNGFN-- 517
Query: 576 TAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAAL 635
+VKD +K G VF H G + +G L VG+ V A+VD RQ ++H+ATHLL AAL
Sbjct: 518 ---FDVKDTQK-YGQVFGHIGELTQGSLSVGQSVNAVVDEVRRQHISLNHSATHLLHAAL 573
Query: 636 KKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALD 695
++V+G+ +Q GSLV+ LRFDF H P+ +L E+ER++N + N ++T +M L+
Sbjct: 574 RQVLGEHVAQKGSLVSDALLRFDFAQHEPISKAQLAEVERIVNQQVRANNSIKTDIMELE 633
Query: 696 DAKRAGAIAMFGEKYGEQVKI 716
AK GA+A+FGEKY +QV++
Sbjct: 634 AAKAKGAMALFGEKYSDQVRV 654
>gi|315635122|ref|ZP_07890400.1| alanine--tRNA ligase [Aggregatibacter segnis ATCC 33393]
gi|315476084|gb|EFU66838.1| alanine--tRNA ligase [Aggregatibacter segnis ATCC 33393]
Length = 874
Score = 586 bits (1510), Expect = e-164, Method: Compositional matrix adjust.
Identities = 319/687 (46%), Positives = 435/687 (63%), Gaps = 62/687 (9%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ +LDF+ S+GH+V+ S+SLVP+ DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 7 IRQSYLDFFHSKGHQVVASSSLVPDNDPTLLFTNAGMNQFKNVFLGLEKRPYTRATTAQR 66
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI + WEF T GLP R
Sbjct: 67 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAIHYGWEFLTSPQWLGLPKER 126
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+ IW+KE+G+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 127 LWVTVYETDDEAYNIWHKEIGIPAERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 186
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N+ DG++E L + ++DTG+GLERI+
Sbjct: 187 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRHADGTMEKLPKPSVDTGMGLERISA 245
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ D+ +I K +EL D N +L++I DH+R+ YL++DGV P
Sbjct: 246 VLQHVNSNYDIDIFKTLIAKVAELTG-----EKDLANKSLRVIADHIRSCAYLIADGVVP 300
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN GRGYV+RR+IRRAVR G LLG AF + I++ +VK ++
Sbjct: 301 SNEGRGYVLRRIIRRAVRHGHLLGATE--------AFFYKLVPTLIDVMAEAGEEVKKQQ 352
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
+ + L+ EE +F +TLERG LLD+ LA+ LSG+ AF LYDT+GFP
Sbjct: 353 ATVEKFLRLEEEQFARTLERGLTLLDEALANVKENV--------LSGEVAFKLYDTYGFP 404
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAEKIPD 509
+++T +V E G+++D GF+ EME QR ++Q+A +N+V + VD +
Sbjct: 405 LDLTADVCRERGIAIDEVGFEREMELQRVRAQSASQFGMDYNSV-IRVDGT--------- 454
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
T F GY A V +L G PV +S G V+L+ TPFYAESGGQIGD G L
Sbjct: 455 TRFEGYTESETLAKVTALFHEGNPVESISAGQSAVVILDNTPFYAESGGQIGDIGRL--- 511
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G +VKD +K G VF H G + +G L VG+ V A+VD RQR ++H+ATH
Sbjct: 512 EGNG---FCFDVKDTQK-YGQVFGHIGELTQGSLSVGQSVNAVVDDVRRQRISLNHSATH 567
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
LL AAL++V+G+ +Q GSLV+ LRFDF H + +L E+ER++N + N +QT
Sbjct: 568 LLHAALRQVLGEHVAQKGSLVSDTLLRFDFAQHEAISKAQLAEVERIVNQQVRANNPIQT 627
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKI 716
+M L+ AK GA+A+FGEKY EQV++
Sbjct: 628 DIMELEAAKAKGAMALFGEKYSEQVRV 654
>gi|148270517|ref|YP_001244977.1| alanyl-tRNA synthetase [Thermotoga petrophila RKU-1]
gi|205830276|sp|A5IMH8.1|SYA_THEP1 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|147736061|gb|ABQ47401.1| alanyl-tRNA synthetase [Thermotoga petrophila RKU-1]
Length = 863
Score = 586 bits (1510), Expect = e-164, Method: Compositional matrix adjust.
Identities = 304/672 (45%), Positives = 433/672 (64%), Gaps = 36/672 (5%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
+ + IR+ FL F+ +GHK+LPSASL+P+DP +L T+AGM+ FKPIF GKV R AT
Sbjct: 5 TSEEIREAFLKFFEKKGHKILPSASLIPDDPQLLFTVAGMVPFKPIFWGKVEPVYTRVAT 64
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
Q+C+RT D+ENVG+T RHHTFFEMLGNFSFGDYFK+EAI+WAWEF T G+P +LW+
Sbjct: 65 CQKCLRTVDIENVGKTPRHHTFFEMLGNFSFGDYFKEEAIEWAWEFLTQVLGVPEEKLWV 124
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWN-SGATGPCGPCSEIYYDFHPDRGCS 227
SVYE+D+EAF IWN+++G+P + I RMG +DNFW +G TGPCGP +EI+YD +GC
Sbjct: 125 SVYEEDEEAFRIWNEKIGLPEKKILRMGKEDNFWGPAGPTGPCGPDTEIFYDTGYSKGCP 184
Query: 228 D----VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNN 283
+ + RF+E +NLVF +Y + ++G L PL +KNIDTG GLER ++Q V +N
Sbjct: 185 EGEECTPANSEGRFVEIWNLVFTEYYQDEEGKLHPLPRKNIDTGAGLERFCAMMQGVYSN 244
Query: 284 YETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYV 343
++TDL PII + EL V Y ++++ ++++++I DH+RAI +L+S+GVFPSN GRGYV
Sbjct: 245 FDTDLFQPIINRIEELTGVGY-KTDEEKDVSIRVIADHMRAITFLISEGVFPSNEGRGYV 303
Query: 344 VRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELK 403
+RR+IRRA+R G LLG + FL I + E + ++ E + E L
Sbjct: 304 LRRIIRRAMRHGILLG--------MSEPFLYRIVDAVAEKMGKVYPEIVRGESMVKEVLS 355
Query: 404 REELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVA 463
EE RF++TLE+G K+ D+++ R+ +DAF LYDT+G P+E+T E+A
Sbjct: 356 AEESRFLKTLEQGMKVFDEIVEKK----------GRIDSEDAFKLYDTYGLPLELTLEIA 405
Query: 464 EEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPD---TEFLGYDTLSA 520
E GV VD+K F+ ME Q+R+S+ A V+ + + E++P TEF GY+ L
Sbjct: 406 REKGVEVDVKEFNKYMEEQQRKSRVALGDVEFA--RRYEYLEELPKDFRTEFTGYEKLED 463
Query: 521 KAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVE 580
+ V + N K V ++ + VEV+ ++TPFYAE GGQ+ D G + G V E
Sbjct: 464 EGEVVLIAKNEKAVEDATEDA-VEVVFSKTPFYAEKGGQVSDTGTVEWEDGKALVEYVFE 522
Query: 581 VKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIG 640
+ V VH+ + G L G++V VD K R+ +HTATHLL AALKKV+G
Sbjct: 523 ASE------GVIVHRIKVLAGTLRRGQKVVLRVDKKRREATMRNHTATHLLHAALKKVLG 576
Query: 641 QETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRA 700
QAGSLVA DRLRFDF + L E+E++E L+N WI +A ++ + + ++A ++
Sbjct: 577 DHVRQAGSLVAPDRLRFDFTHFKGLSMAEIEQVENLVNEWIMEAIPVEVRYTSYEEAVKS 636
Query: 701 GAIAMFGEKYGE 712
G +A+F EKYG+
Sbjct: 637 GVVALFTEKYGD 648
>gi|325290063|ref|YP_004266244.1| alanyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271]
gi|324965464|gb|ADY56243.1| alanyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271]
Length = 875
Score = 586 bits (1510), Expect = e-164, Method: Compositional matrix adjust.
Identities = 304/674 (45%), Positives = 433/674 (64%), Gaps = 28/674 (4%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
+GD +R+ FL+F+ +GH++ SASL+P+ DPT+LLT+AGM+ FKP F+ +V PRA
Sbjct: 3 TGDQLREMFLNFFQEKGHRLQASASLIPKNDPTLLLTVAGMVPFKPYFMRQVEPPFPRAT 62
Query: 108 TSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
T Q+C+RT D+E VG+T+RHHTFFEMLGNFSFGDYFK+EAI WAWE+ T LPA++LW
Sbjct: 63 TCQKCVRTPDLERVGKTARHHTFFEMLGNFSFGDYFKEEAITWAWEYVTEVIKLPADQLW 122
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCS 227
I+V+ +D EA EIW + GV + + + ++NFW +G GPCGPCSEIY D RGC
Sbjct: 123 ITVHPEDHEAREIWINKAGVSPDRL--LDDEENFWAAGPVGPCGPCSEIYVDLGEARGCG 180
Query: 228 --DVDLGDDT-RFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNY 284
D +G D RF+E +NLVFMQY + + G+L PL ++NIDTG+GLERI ++Q V +N+
Sbjct: 181 KPDCAIGCDCDRFLEIWNLVFMQYTRDESGTLTPLPRQNIDTGMGLERITSVMQGVVSNF 240
Query: 285 ETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVV 344
+TDL PII K +E+A ++Y + + + + LK+I DH RAI ++L DG+ PS+ GRGYV+
Sbjct: 241 DTDLFIPIINKIAEIAGINY-KDDPKKDTALKVISDHTRAIAFMLGDGIRPSSDGRGYVL 299
Query: 345 RRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKR 404
RR++RRAVR RL+GI E FL I H ++K E IL LK
Sbjct: 300 RRILRRAVRYARLIGI--------EKPFLEQIFAVIQSKYAHAYPELKENENFILNHLKL 351
Query: 405 EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAE 464
EE F TLE+G Q+L D + ++ G + ++G DAF LY+T+GFPVE+T+E+
Sbjct: 352 EEKNFQATLEQG----TQILQDKVESLKKQG-LQEINGTDAFHLYETYGFPVELTEEILA 406
Query: 465 EHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSA--DLAEKIPDTEFLGYDTLSAKA 522
E G++VDM+ + + E R+ ++ + S ++ A + A ++ TEF+GY LS +
Sbjct: 407 EEGITVDMENYQLAFEEHRKAAKEQSRQMVSSAENMALINKARELGKTEFVGYRQLSTET 466
Query: 523 IVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVK 582
V +L + V +G +V LL RTPFYAESGGQ+ D G++ + A +V
Sbjct: 467 FVAALFSGEEEVASAGEGEEVLCLLPRTPFYAESGGQVADKGWI------RSERAEAQVM 520
Query: 583 DVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQE 642
+V+K F H+ I GVL+V V A VD ++R+ HH++THLL AL+KV+GQ
Sbjct: 521 EVRKLPDGSFCHRLRITSGVLKVQDTVVAEVDGEIRKSIAAHHSSTHLLHTALRKVLGQH 580
Query: 643 TSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGA 702
QAGSLV+ +RLRFDF+ + EL +E IN I A + M ++DAK GA
Sbjct: 581 VQQAGSLVSEERLRFDFSHFSAMSTEELNTVEEEINRQIRGALSVNIAEMCMEDAKAQGA 640
Query: 703 IAMFGEKYGEQVKI 716
IA+FGEKYG++V++
Sbjct: 641 IALFGEKYGDEVRV 654
>gi|387120758|ref|YP_006286641.1| alanyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
D7S-1]
gi|415763244|ref|ZP_11482047.1| alanyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
D17P-3]
gi|348654668|gb|EGY70269.1| alanyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
D17P-3]
gi|385875250|gb|AFI86809.1| alanyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
D7S-1]
Length = 874
Score = 586 bits (1510), Expect = e-164, Method: Compositional matrix adjust.
Identities = 317/681 (46%), Positives = 432/681 (63%), Gaps = 50/681 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ +LDF+ S+GH+V+ S+SLVPE DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 7 IRQSYLDFFHSKGHQVVASSSLVPENDPTLLFTNAGMNQFKNVFLGLEKRPYSRATTAQR 66
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI + WEF T GLP R
Sbjct: 67 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAIHFGWEFLTSPQWLGLPKER 126
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE D+EA++IW+ E+G+ E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 127 LWVTVYETDEEAYKIWHDEIGIAAERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 186
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N+ DG++E L + ++DTG+GLERI+
Sbjct: 187 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRHADGTMEKLPKPSVDTGMGLERISA 245
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ D+ +I K +EL D TN +L++I DH+R+ YL+ DGV P
Sbjct: 246 VLQHVNSNYDIDIFQKLIAKTAELTG-----EKDLTNKSLRVIADHIRSCAYLIVDGVVP 300
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN GRGYV+RR+IRRAVR G LLG AF + IE+ +VK +
Sbjct: 301 SNEGRGYVLRRIIRRAVRHGHLLGATE--------AFFYKLVPTLIEVMAQAGEEVKKHQ 352
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
+ + L+ EE +F +TLERG LLD+ LA+ + LSG+ AF LYDT+GFP
Sbjct: 353 ATVEKLLRLEEEQFARTLERGLTLLDEALAEVKGKV--------LSGEVAFKLYDTYGFP 404
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGY 515
+++T +V E G+++D GF+ EMENQR ++Q+A D ++ T F GY
Sbjct: 405 LDLTADVCRERGITIDEAGFEREMENQRLRAQSASQFGM----DYNNVIHVDGITRFEGY 460
Query: 516 DTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
A V +L +GKPV +S G V+L+ TPFYAESGGQIGD G L G N
Sbjct: 461 TESETLAKVTALFHDGKPVDTISAGQSAVVILDNTPFYAESGGQIGDIGRLE-GNGFN-- 517
Query: 576 TAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAAL 635
+VKD +K G VF H G + +G L VG+ V A+VD RQ ++H+ATHLL AAL
Sbjct: 518 ---FDVKDTQK-YGQVFGHIGELTQGSLSVGQSVNAVVDEVRRQHISLNHSATHLLHAAL 573
Query: 636 KKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALD 695
++V+G+ +Q GSLV+ LRFDF H P+ +L E+ER++N + N ++T +M L+
Sbjct: 574 RQVLGEHVAQKGSLVSDALLRFDFAQHEPISKAQLAEVERIVNQQVRANNPIKTDIMELE 633
Query: 696 DAKRAGAIAMFGEKYGEQVKI 716
AK GA+A+FGEKY +QV++
Sbjct: 634 AAKAKGAMALFGEKYSDQVRV 654
>gi|258515483|ref|YP_003191705.1| alanyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
gi|257779188|gb|ACV63082.1| alanyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
Length = 878
Score = 585 bits (1509), Expect = e-164, Method: Compositional matrix adjust.
Identities = 301/676 (44%), Positives = 436/676 (64%), Gaps = 30/676 (4%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
+G+ IR FL+F+A RGH ++PSASL+P DP++L T AGM+ FKP F G + R
Sbjct: 2 TGNEIRDSFLNFFAKRGHYIIPSASLIPANDPSILWTAAGMVPFKPFFTGAATPEHTRVT 61
Query: 108 TSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
T Q+C+RT D++ VG+T+RHHTFFEMLGNFSFGDYFK EAI WAWEF TV GLP +LW
Sbjct: 62 TCQKCLRTPDIDVVGKTARHHTFFEMLGNFSFGDYFKTEAINWAWEFVTVNLGLPKEKLW 121
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCS 227
IS+YE+DDEAFEIW+K+V +P + I R+G D NFW G GPCGPCSEIY D RGC
Sbjct: 122 ISIYENDDEAFEIWHKQVAIPADKIIRLGKDTNFWEIG-VGPCGPCSEIYIDLGEHRGCG 180
Query: 228 DVDLG---DDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNY 284
D G D R++E +NLVF+Q+ + ++G+ PL+ K IDTG+GLER+A +LQ V N+
Sbjct: 181 SADCGVGCDCDRYLEIWNLVFIQFFRDEEGNYTPLENKGIDTGMGLERVASVLQDVRTNF 240
Query: 285 ETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVV 344
+TDL+ I+ +E V Y + +D+T+L LK+I DH RA+ + + DG PSN GRGYV+
Sbjct: 241 DTDLLREIMDYTAEQLKVIYGK-DDKTDLALKVIADHSRAVTFAIGDGALPSNEGRGYVI 299
Query: 345 RRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKR 404
RRLIRRAVR GR LG+ + FL +A I + +D+ + + I + +
Sbjct: 300 RRLIRRAVRFGRSLGV--------DELFLHKVAGAVIHQMSGTYTDLGSNQGHIKKVILN 351
Query: 405 EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAE 464
EE RF +TL G ++L++++ +A+ R +V +SG DAF LYDT+GFP+E+T+E+A
Sbjct: 352 EEKRFSETLANGTEILNKLIEEAI---RAGNAV--ISGLDAFQLYDTYGFPLELTQEIAG 406
Query: 465 EHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPD----TEFLGYDTLSA 520
E G+ +D F ME+QR ++++A + + ++ L + I D T F+GY+ L A
Sbjct: 407 EQGLLIDEDSFVQAMESQRSRARSARQETEY-ISETGVLYKNIRDERGTTNFIGYNALQA 465
Query: 521 KAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVE 580
+A V +L+ +G+ V G ++E++L+ TP YAE+GGQ+ D+ L + Q V
Sbjct: 466 EAKVLALVKDGQNVQSAQAGDEIEIVLDITPCYAEAGGQVTDFAVL------SGQDLNVM 519
Query: 581 VKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIG 640
+ V K + ++ VHKG + G+L+V V+ V + R +H+ATHLL ALK+V+G
Sbjct: 520 ISQVIKPVENLIVHKGKVESGLLQVNDTVKIEVAGERRLSIARNHSATHLLHKALKEVLG 579
Query: 641 QETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRA 700
+ +QAGSLV DRLRFDF + + + EL +IE+++N I + +L A+
Sbjct: 580 EHVNQAGSLVEPDRLRFDFTHYAAVSNEELNKIEKIVNRTILSNLPVTVSESSLSKAREM 639
Query: 701 GAIAMFGEKYGEQVKI 716
GA A+FGEKYG+ V++
Sbjct: 640 GAAALFGEKYGDLVRV 655
>gi|219870706|ref|YP_002475081.1| alanyl-tRNA synthetase [Haemophilus parasuis SH0165]
gi|219690910|gb|ACL32133.1| alanyl-tRNA synthetase [Haemophilus parasuis SH0165]
Length = 875
Score = 585 bits (1507), Expect = e-164, Method: Compositional matrix adjust.
Identities = 322/693 (46%), Positives = 448/693 (64%), Gaps = 74/693 (10%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FL+F+ S+GH ++PS+SLVPE DPT+L T AGM QFK +FLG R RA +SQR
Sbjct: 7 IRQAFLEFFQSKGHTIVPSSSLVPENDPTLLFTNAGMNQFKDVFLGLDKRSYNRATSSQR 66
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AI +AWEF T LP +
Sbjct: 67 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKPDAIAFAWEFLTSPQWLALPKEK 126
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA++IWN+E+GVP EHI R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 127 LWVTVYETDDEAYDIWNREIGVPAEHIVRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 186
Query: 219 DFHPDR------GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLER 272
D H D G ++ D GD RFIE +N+VFMQ+N++ DG+L+ L + ++DTG+GLER
Sbjct: 187 D-HGDHIWGGPPGSAEED-GD--RFIEVWNVVFMQFNRQADGTLKKLPKPSVDTGMGLER 242
Query: 273 IARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDG 332
I+ +LQ V +NYE D+ +IK+ + L NV+ D N +L++I DH+R+ YL++DG
Sbjct: 243 ISAVLQHVNSNYEIDIFQALIKEIASLLNVT-----DLDNKSLRVIADHIRSCAYLIADG 297
Query: 333 VFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAF----LPSIAEKAIELSTHID 388
V PSN GRGYV+RR+IRRAVR G +LG K AF +P++A KA+ + I
Sbjct: 298 VMPSNEGRGYVLRRIIRRAVRHGNILGAKS--------AFFYQLVPTLA-KAMGQAGEI- 347
Query: 389 SDVKAREQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLL 448
+ ++ I + LK EE +F +TLERG LL+ DAL++ LSG+ AF L
Sbjct: 348 --LTQKQAHIQKALKAEEDQFARTLERGLALLE----DALTKVEN----KVLSGEVAFKL 397
Query: 449 YDTFGFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHN-----AVKLSVDDSADL 503
YDT+GFP+++T +V E +++D GF+ EM+ QR ++QA+ N + VD S
Sbjct: 398 YDTYGFPLDLTADVCRERSITIDEAGFEREMQAQRARAQASSNFGTDYNYVIKVDGS--- 454
Query: 504 AEKIPDTEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDY 563
TEF GY+ +A V +L NGK V + G + V+L+RT FY ESGGQ+GD
Sbjct: 455 ------TEFKGYEVTECEATVVALFSNGKAVEAIQSGENAVVVLDRTAFYGESGGQVGDS 508
Query: 564 GFLYVTQGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKV 623
G + + EV D +K G VF H G + G L VG +V+A V+ R +
Sbjct: 509 GVIA------SEICNFEVNDTQK-YGQVFGHIGQLASGTLSVGDKVKAEVNATRRHAITL 561
Query: 624 HHTATHLLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGD 683
+H+ATHLL +AL++V+G +Q GSLV+ + LRFDF+ + +LEEIER+IN I +
Sbjct: 562 NHSATHLLHSALRQVLGDHVAQKGSLVSENSLRFDFSQGEAISKADLEEIERIINTKIRE 621
Query: 684 ANLLQTKVMALDDAKRAGAIAMFGEKYGEQVKI 716
++ T+VM L+ AK+ GA+A+FGEKYG++V++
Sbjct: 622 NIVVTTEVMDLESAKQKGAMALFGEKYGDRVRV 654
>gi|335043025|ref|ZP_08536052.1| alanyl-tRNA synthetase [Methylophaga aminisulfidivorans MP]
gi|333789639|gb|EGL55521.1| alanyl-tRNA synthetase [Methylophaga aminisulfidivorans MP]
Length = 867
Score = 585 bits (1507), Expect = e-164, Method: Compositional matrix adjust.
Identities = 314/682 (46%), Positives = 447/682 (65%), Gaps = 48/682 (7%)
Query: 48 SSGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRA 106
SS D IRK FLDF+AS+GH+V+ S+ LVP DPT+L T AGM+QFK FLG+ R+ RA
Sbjct: 3 SSAD-IRKLFLDFFASKGHEVVASSPLVPANDPTLLFTNAGMVQFKETFLGQETRKYTRA 61
Query: 107 ATSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLP 162
T+QRC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK+EAIQ+AWEF T LP
Sbjct: 62 VTTQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKREAIQYAWEFLTETLALP 121
Query: 163 ANRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHP 222
A +LWI+V+E+DDEA +IW E+GV E R+GA DNFW+ G TGPCGPCSEI+YD
Sbjct: 122 AEKLWITVFEEDDEAADIWLNEIGVSAERFSRIGAKDNFWSMGDTGPCGPCSEIFYDHGG 181
Query: 223 D--RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKV 280
D G D R+IE +NLVFMQ+N+ DG+L PL + ++DTG+GLER+A +LQ V
Sbjct: 182 DVAGGPPGTPEEDGDRYIEIWNLVFMQFNRSADGTLTPLPKPSVDTGMGLERLAAVLQHV 241
Query: 281 PNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGR 340
NNYE DL +I+ +L+ + D TN +L++I DH+R+ ++++DGV+PSN GR
Sbjct: 242 HNNYEIDLFQHLIQAIQKLSG-----TEDHTNFSLRVIADHIRSCSFMITDGVYPSNEGR 296
Query: 341 GYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILE 400
GYV+RR+IRRA+R G LG+K + L + + E EL A+ Q ++E
Sbjct: 297 GYVLRRIIRRAIRHGHKLGLKDNFFYKLVQPLVDEMGEAFPEL---------AQSQELVE 347
Query: 401 E-LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEIT 459
+ L++EE RF TL+ G K+LDQ + D + + G+ FLLYDT+GFP+++T
Sbjct: 348 KALQQEETRFADTLDNGLKILDQAIEDMGDK--------EIPGETVFLLYDTYGFPIDLT 399
Query: 460 KEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKI---PDTEFLGYD 516
++A E G+++D+ GF+ ME QR ++++A S L+++I TEF GYD
Sbjct: 400 ADIARERGLTIDIAGFERAMEAQRNRARSASQF-------SGGLSDQITIDSSTEFCGYD 452
Query: 517 TLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQT 576
+ + +++VNG+ V +S+G + ++L++TPFYAESGGQ+GD+G + N
Sbjct: 453 LTQHDSTILAIIVNGEHVDSISEGQEGLIVLDKTPFYAESGGQVGDHGEI------NADN 506
Query: 577 AVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALK 636
A V D +K F H G G +VG+ V A +D R ++H+ATHLL AAL+
Sbjct: 507 ASFTVSDTRKQ-SQAFTHIGRCEHGRFQVGQRVTAQIDENNRLATALNHSATHLLHAALR 565
Query: 637 KVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDD 696
KV+G+ Q GSLV RLRFDF+ P+ +L EIERL+N I + ++T++MA+++
Sbjct: 566 KVLGEHVMQKGSLVNPQRLRFDFSHFEPVTPAQLREIERLVNQQIRLNHPVETRLMAIEE 625
Query: 697 AKRAGAIAMFGEKYGEQVKISS 718
AK++GA+A+FGEKY ++V++ S
Sbjct: 626 AKKSGAMALFGEKYDDEVRVLS 647
>gi|398792409|ref|ZP_10553040.1| alanine--tRNA ligase [Pantoea sp. YR343]
gi|398213138|gb|EJM99733.1| alanine--tRNA ligase [Pantoea sp. YR343]
Length = 875
Score = 584 bits (1505), Expect = e-164, Method: Compositional matrix adjust.
Identities = 314/688 (45%), Positives = 435/688 (63%), Gaps = 64/688 (9%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM+QFK +FLG+ R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMVQFKDVFLGQDKRDYARATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFKKEAI +AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKKEAIAYAWELLTGEQWFKLPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEAFEIW ++GVP E I R+G A DNFW G TGPCGPC+EI++
Sbjct: 128 LWVTVYETDDEAFEIWANDIGVPRERIIRIGDNKGSAYASDNFWQMGDTGPCGPCTEIFF 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NYE DL +IK +++ + D N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYEIDLFAKLIKSVAQVTGAT-----DLDNKSLRVIADHIRSCAFLIADGVIP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K AF + IE+ D+K ++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAKE--------AFFYKLVAPLIEVMGAAGEDLKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
+ + LK EE +F +TLERG LLD+ LA T L G+ F LYDTFGFP
Sbjct: 354 KHVENALKNEEEQFAKTLERGLALLDEELAKLQGDT--------LDGETVFRLYDTFGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA-------HNAVKLSVDDSADLAEKIP 508
++T +V E + +D GF+ ME QR++++ A +N +++ D+A
Sbjct: 406 ADLTADVCRERNLKIDEAGFEAAMEQQRQRAREASGFGADYNNVIRI---DAA------- 455
Query: 509 DTEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYV 568
T+F GYD L A VE+L V+G+ V +++ G D V+L+ TPFY ESGGQ+GD G L
Sbjct: 456 -TDFKGYDHLELNATVEALFVDGQQVEQINAGQDAVVVLDETPFYGESGGQVGDTGVL-- 512
Query: 569 TQGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTAT 628
G N + +V + + K++G H G + G L VG + A VD R R +++H+AT
Sbjct: 513 -AGQNAEFSVQDTQKYGKAIG----HIGKLSSGQLRVGDRLHAQVDETRRARIRLNHSAT 567
Query: 629 HLLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQ 688
HLL AAL++V+G Q GSLV LRFDF+ + E+ ++E ++N I ++
Sbjct: 568 HLLHAALRQVLGDHVGQKGSLVNDKYLRFDFSHFEAMKPQEIRQVEDIVNAQIRRNLAVE 627
Query: 689 TKVMALDDAKRAGAIAMFGEKYGEQVKI 716
T++M LDDAK+ GA+A+FGEKY ++V++
Sbjct: 628 TEIMDLDDAKQKGAMALFGEKYDQRVRV 655
>gi|419845741|ref|ZP_14369005.1| alanine--tRNA ligase [Haemophilus parainfluenzae HK2019]
gi|386415102|gb|EIJ29640.1| alanine--tRNA ligase [Haemophilus parainfluenzae HK2019]
Length = 874
Score = 584 bits (1505), Expect = e-164, Method: Compositional matrix adjust.
Identities = 317/681 (46%), Positives = 437/681 (64%), Gaps = 50/681 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVPE DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 7 IRQSFLDFFHSKGHQVVASSSLVPENDPTLLFTNAGMNQFKDVFLGMDKRPYSRATTAQR 66
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AI +AWEF T GLP +
Sbjct: 67 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAINFAWEFLTSPQWLGLPKEK 126
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE D+EA++IW+KEVGVP E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 127 LWVTVYETDNEAYDIWHKEVGVPAERIIRIGDNKGAPYASDNFWAMGDTGPCGPCTEIFY 186
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++E L + ++DTG+GLERI+
Sbjct: 187 D-HGDHIWGGPPGSPEEDGDRYIEIWNVVFMQFNRQADGTMEKLPRPSVDTGMGLERISA 245
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NYE D+ +I K +E+ + D TN +L++I DH+R+ YL++DGV P
Sbjct: 246 VLQHVNSNYEIDIFQKLIAKTAEIVGTT-----DLTNKSLRVIADHIRSCAYLIADGVIP 300
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN GRGYV+RR+IRRAVR G LLG K AF + IE+ +VK ++
Sbjct: 301 SNEGRGYVLRRIIRRAVRHGHLLGAKE--------AFFYKLVPTLIEVMAEAGKEVKEKQ 352
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
+ + L+ EE +F +TLERG LLD DAL++ ++ LSG+ AF LYDT+GFP
Sbjct: 353 ANVEKLLRLEEEQFARTLERGLSLLD----DALAQVKDG----VLSGEVAFKLYDTYGFP 404
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGY 515
+++T +V E +++D GF+ EME QR ++Q+A D ++ +T+F GY
Sbjct: 405 LDLTADVCRERDIAIDEAGFEREMEAQRLRAQSASQFGM----DYNNVIRVEGETKFEGY 460
Query: 516 DTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
+ A V +L +GK V ++ G V+L TPFYAESGGQIGD G+L +QG
Sbjct: 461 TESESLAKVTALFHDGKSVESITAGQSAVVILENTPFYAESGGQIGDSGYL-TSQGIQ-- 517
Query: 576 TAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAAL 635
VKD +K G VF H G + +G L+VG+ V A+VD R + ++H+ATHLL AAL
Sbjct: 518 ---FNVKDTQK-YGQVFGHIGELEQGTLKVGQTVNAVVDAARRHQTSLNHSATHLLHAAL 573
Query: 636 KKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALD 695
++V+G Q GSLV+ LRFDF + +L EIE L+N + + ++QT VM ++
Sbjct: 574 RQVLGHHVVQKGSLVSDTALRFDFAHPEAITKAQLNEIETLVNQKVRENFVVQTDVMDIE 633
Query: 696 DAKRAGAIAMFGEKYGEQVKI 716
AK GA+A+FGEKY + V++
Sbjct: 634 AAKAKGAMALFGEKYADVVRV 654
>gi|429732378|ref|ZP_19266992.1| alanine--tRNA ligase [Aggregatibacter actinomycetemcomitans Y4]
gi|429156426|gb|EKX99058.1| alanine--tRNA ligase [Aggregatibacter actinomycetemcomitans Y4]
Length = 874
Score = 583 bits (1504), Expect = e-164, Method: Compositional matrix adjust.
Identities = 316/681 (46%), Positives = 431/681 (63%), Gaps = 50/681 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ +LDF+ S+GH+V+ S+SL PE DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 7 IRQSYLDFFHSKGHQVVASSSLFPENDPTLLFTNAGMNQFKNVFLGLEKRPYSRATTAQR 66
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI + WEF T GLP R
Sbjct: 67 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAIHFGWEFLTSPQWLGLPKER 126
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE D+EA++IW+ E+G+ E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 127 LWVTVYETDEEAYKIWHDEIGIAAERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 186
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N+ DG++E L + ++DTG+GLERI+
Sbjct: 187 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRHADGTMEKLPKPSVDTGMGLERISA 245
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ D+ +I K +EL D TN +L++I DH+R+ YL+ DGV P
Sbjct: 246 VLQHVNSNYDIDIFQKLIAKTAELTG-----EKDLTNKSLRVIADHIRSCAYLIVDGVVP 300
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN GRGYV+RR+IRRAVR G LLG AF + IE+ +VK +
Sbjct: 301 SNEGRGYVLRRIIRRAVRHGHLLGATE--------AFFYKLVPTLIEVMAQAGEEVKKHQ 352
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
+ + L+ EE +F +TLERG LLD+ LA+ + LSG+ AF LYDT+GFP
Sbjct: 353 ATVEKLLRLEEEQFARTLERGLTLLDEALAEVKGKV--------LSGEVAFKLYDTYGFP 404
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGY 515
+++T +V E G+++D GF+ EMENQR ++Q+A D ++ T F GY
Sbjct: 405 LDLTADVCRERGITIDEAGFEREMENQRLRAQSASQFGM----DYNNVIHVDGITRFEGY 460
Query: 516 DTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
A V +L +GKPV +S G V+L+ TPFYAESGGQIGD G L G N
Sbjct: 461 TESETLAKVTALFHDGKPVDTISAGQSAVVILDNTPFYAESGGQIGDIGRLE-GNGFN-- 517
Query: 576 TAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAAL 635
+VKD +K G VF H G + +G L VG+ V A+VD RQ ++H+ATHLL AAL
Sbjct: 518 ---FDVKDTQK-YGQVFGHIGELTQGSLSVGQSVNAVVDEVRRQHISLNHSATHLLHAAL 573
Query: 636 KKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALD 695
++V+G+ +Q GSLV+ LRFDF H P+ +L E+ER++N + N ++T +M L+
Sbjct: 574 RQVLGEHVAQKGSLVSDALLRFDFAQHEPISKAQLAEVERIVNQQVRANNPIKTDIMELE 633
Query: 696 DAKRAGAIAMFGEKYGEQVKI 716
AK GA+A+FGEKY +QV++
Sbjct: 634 AAKAKGAMALFGEKYSDQVRV 654
>gi|260913378|ref|ZP_05919859.1| alanine-tRNA ligase [Pasteurella dagmatis ATCC 43325]
gi|260632609|gb|EEX50779.1| alanine-tRNA ligase [Pasteurella dagmatis ATCC 43325]
Length = 874
Score = 583 bits (1504), Expect = e-164, Method: Compositional matrix adjust.
Identities = 317/680 (46%), Positives = 432/680 (63%), Gaps = 48/680 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ ++GH+++ S+SLVPE DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 7 IRQSFLDFFHTKGHQIVESSSLVPENDPTLLFTNAGMNQFKDVFLGMDKRPYSRATTAQR 66
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFKK+AI + WE+ T GLP +
Sbjct: 67 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKKDAIHFGWEYLTSPRWLGLPKEK 126
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+ IWNKEVGVP E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 127 LWVTVYETDDEAYNIWNKEVGVPAERIVRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 186
Query: 219 DF--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARI 276
D H G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERI+ +
Sbjct: 187 DHGEHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERISAV 246
Query: 277 LQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPS 336
LQ V +NYE D+ +I K +EL D TN +L+++ DH+R+ YL++DGV PS
Sbjct: 247 LQHVNSNYEIDIFQKLIAKVAELTG-----EKDLTNKSLRVVADHIRSCAYLIADGVIPS 301
Query: 337 NIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQ 396
N GRGYV+RR+IRRAVR G LLG K AF + IE VK ++
Sbjct: 302 NEGRGYVLRRIIRRAVRHGNLLGAKE--------AFFYKLVPTLIEAMASAGIQVKEKQA 353
Query: 397 RILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPV 456
+ + L+ EE +F +TLERG LLD+ AL++ +++ LSG+ AF LYDT+GFP
Sbjct: 354 NVEKLLRLEEEQFARTLERGLTLLDE----ALNQVKDN----ELSGKVAFKLYDTYGFPF 405
Query: 457 EITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYD 516
++T +V E +++D GF+ EME QR ++Q+A D ++ T F GY
Sbjct: 406 DLTADVCRERNITIDEAGFEREMEAQRLRAQSASQFGM----DYNNVIRMDGVTVFEGYT 461
Query: 517 TLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQT 576
A V +L GKPV +V G ++L+ TPFYAESGGQIGD G L + Q
Sbjct: 462 ESETLAKVTALFCEGKPVERVEAGQSAVIILDNTPFYAESGGQIGDAGRL------DGQD 515
Query: 577 AVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALK 636
EV+D +K G VF H G + G L +G+ V A+VD + R R ++H+ATHLL AAL+
Sbjct: 516 FAFEVEDTQK-YGRVFGHIGKVTIGSLAIGQLVNAVVDVERRHRTSLNHSATHLLHAALR 574
Query: 637 KVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDD 696
+V+G Q GSLV+ LRFDF + +L EIER++N I +++QT++M L+
Sbjct: 575 QVLGTHVVQKGSLVSDVALRFDFAHPEAITKEQLIEIERVVNQQIRANHVIQTEIMDLEA 634
Query: 697 AKRAGAIAMFGEKYGEQVKI 716
AK GA+A+FGEKY +QV++
Sbjct: 635 AKAKGAMALFGEKYADQVRV 654
>gi|89895167|ref|YP_518654.1| alanyl-tRNA synthetase [Desulfitobacterium hafniense Y51]
gi|122482444|sp|Q24UT2.1|SYA_DESHY RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|89334615|dbj|BAE84210.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 875
Score = 583 bits (1503), Expect = e-163, Method: Compositional matrix adjust.
Identities = 324/677 (47%), Positives = 446/677 (65%), Gaps = 30/677 (4%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
+G+ +R FL+F+AS+GH++LPSASL+P +DPT+LLT+AGM+ FKP F+ KV PRA
Sbjct: 3 TGNQLRDMFLNFFASKGHRILPSASLIPKDDPTLLLTVAGMVPFKPYFMRKVEPPFPRAT 62
Query: 108 TSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
TSQ+C+RT D+E VG+T+RHHTFFEMLGNFSFGDYFK EAI WAWEF T LP ++LW
Sbjct: 63 TSQKCVRTPDLEVVGKTARHHTFFEMLGNFSFGDYFKAEAIPWAWEFVTEVLKLPIDQLW 122
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCS 227
I+V+ +D+EA +W ++ GV E IK +N W +G GPCG CSEIY D RGC
Sbjct: 123 ITVHPEDEEAKNLWIEKTGVSPERIKY--DPENLWAAGPVGPCGYCSEIYVDLGESRGCG 180
Query: 228 --DVDLGDDT-RFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNY 284
D LG D RF+E +NLVFMQYN+ + G L PL ++NIDTG+GLERIA ++Q +N+
Sbjct: 181 KPDCALGCDCDRFLEIWNLVFMQYNRDEAGLLTPLPKQNIDTGMGLERIASVMQGAASNF 240
Query: 285 ETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVV 344
+TDL PII K +EL+ + Y S + ++ +K++ DH RA+ ++LSDG+ P + GRGYV+
Sbjct: 241 DTDLFLPIINKVAELSGIPYHDS-PKNDVAMKVVADHTRAVSFMLSDGIRPGSEGRGYVL 299
Query: 345 RRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKR 404
RR++RRA+R RLLGI + LE FL I +K +H ++K E IL L+
Sbjct: 300 RRILRRAIRYARLLGID---KPFLEQIFL--IIQKDY---SHHYPELKENENFILNHLRL 351
Query: 405 EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAE 464
EE F TLE+G Q+L D + +E+G LSG DAF LY+T+GFPVE+T+E+
Sbjct: 352 EEKNFQATLEQG----TQILQDKVKTLQEAGET-MLSGADAFYLYETYGFPVELTEEMLI 406
Query: 465 EHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEK---IPDTEFLGYDTLSAK 521
E G+SVDM+ F+ E RR ++ +K +V +SA ++EK + T FLGY L+A
Sbjct: 407 EQGMSVDMETFNAAAEEHRRLAKEQSQQMK-AVQESAAISEKAKALGTTPFLGYHELAAH 465
Query: 522 AIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEV 581
VE+L +G+ V ++G +V + L +PFYAESGGQI D G V + + ++EV
Sbjct: 466 TKVEALFRDGEEVKDAAEGDEVLIFLRESPFYAESGGQISDSG---VIRSLRAEAKLIEV 522
Query: 582 KDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQ 641
K K G+V+ H+ + +GVL G EVEA+VD LR HH+ATHLLQAAL+ V+G+
Sbjct: 523 K--KGVTGTVY-HRFLLTQGVLHTGDEVEALVDEHLRLATARHHSATHLLQAALRAVLGE 579
Query: 642 ETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAG 701
QAGSLV DRLRFDF L EL+ +E L+N + + + M+LD AK +G
Sbjct: 580 HVQQAGSLVTPDRLRFDFTHFSALTSAELQRVEDLLNEAVLANMPVAAEEMSLDAAKASG 639
Query: 702 AIAMFGEKYGEQVKISS 718
A A+FGEKYG+ V++ S
Sbjct: 640 ATALFGEKYGDTVRVVS 656
>gi|220931419|ref|YP_002508327.1| alanyl-tRNA synthetase [Halothermothrix orenii H 168]
gi|219992729|gb|ACL69332.1| alanyl-tRNA synthetase [Halothermothrix orenii H 168]
Length = 876
Score = 583 bits (1502), Expect = e-163, Method: Compositional matrix adjust.
Identities = 310/676 (45%), Positives = 430/676 (63%), Gaps = 31/676 (4%)
Query: 48 SSGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRA 106
++ D +RK +LDF+ RGH VLPSA L+P DP++L AGM FKP F G+ R
Sbjct: 3 TTSDELRKAYLDFFKDRGHLVLPSAPLIPRNDPSLLWINAGMAPFKPYFDGRKKPPKTRI 62
Query: 107 ATSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRL 166
+TSQ+CIRTND+ENVG+T+RH TFFEMLGNFSFGDYFK+EAI+WAWEF T L NRL
Sbjct: 63 STSQKCIRTNDIENVGKTARHLTFFEMLGNFSFGDYFKEEAIEWAWEFVTRVLNLEENRL 122
Query: 167 WISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGC 226
WI++Y+DDDEAF+IW+ +VGVP I RMG DNFW G TGPCGPCSEI+YD + G
Sbjct: 123 WITIYKDDDEAFKIWHDKVGVPENRIVRMGKKDNFWEIG-TGPCGPCSEIHYDRGEEFGN 181
Query: 227 SDVDL--GDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNY 284
S D+ G+ RF+E +NLVF QYN+ +DG L QKNIDTG+GLER+A +LQ V +N+
Sbjct: 182 SSEDVIGGEGDRFLEIWNLVFTQYNRTEDGEYLSLPQKNIDTGMGLERVASLLQGVNSNF 241
Query: 285 ETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVV 344
ETDL+ PII S+ + V Y + + ++I DH+RA+ + DGV PSN GRGYV+
Sbjct: 242 ETDLLKPIINFVSQDSGVQYTEGQ---RVPFRVISDHIRAVTMAIHDGVLPSNEGRGYVI 298
Query: 345 RRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKR 404
RRL+RRAVR G G+ N E FL I +++ + ++K +E+ + +K
Sbjct: 299 RRLLRRAVRYG--------GKLNYEEPFLYKIVPVVVDIMSGGYPELKEKEEHVSSVVKS 350
Query: 405 EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAE 464
EE RF QTLE+G +L++M+ + + + LSG++AF LYDT+GFP+++T++V
Sbjct: 351 EEERFFQTLEQGLNILNEMMEEMKDKGEKI-----LSGKNAFKLYDTYGFPLDLTRDVLA 405
Query: 465 EHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDS----ADLAEKIPDTEFLGYDTLSA 520
EHG VD F EME QR +++ A V S D +L E++ +TEF GY +LS
Sbjct: 406 EHGYKVDEDVFTREMEKQRERARQARADVGFSGTDGEGIYKELREELGETEFTGYRSLSN 465
Query: 521 KAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVE 580
+ ++ +G+PV ++ G E++LN TPFYA GGQ+GD G L ++ +
Sbjct: 466 TTRIVGIVKDGQPVESLNNGEKGEIILNVTPFYARGGGQVGDKGILIDSEHRAR------ 519
Query: 581 VKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIG 640
V D +K G + VH + +G + + VEA VD +LR +H+ THLL LK+V+G
Sbjct: 520 VYDTRKK-GGLTVHYTEVEKGEFRIDQVVEARVDEELRYNIARNHSTTHLLHKTLKEVLG 578
Query: 641 QETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRA 700
+Q+GSLVA DRLRFDF+ + PL + E+ IE +N I ++ M + AK
Sbjct: 579 DHVNQSGSLVAPDRLRFDFSHYAPLTEEEINRIEDTVNEKILSNLPVEILEMPFEKAKEM 638
Query: 701 GAIAMFGEKYGEQVKI 716
GA+A+FGEKYG V++
Sbjct: 639 GAVALFGEKYGHIVRV 654
>gi|219669584|ref|YP_002460019.1| alanyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
gi|219539844|gb|ACL21583.1| alanyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
Length = 875
Score = 583 bits (1502), Expect = e-163, Method: Compositional matrix adjust.
Identities = 322/677 (47%), Positives = 446/677 (65%), Gaps = 30/677 (4%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
+G+ +R FL+F+AS+GH++LPSASL+P +DPT+LLT+AGM+ FKP F+ KV PRA
Sbjct: 3 TGNQLRDMFLNFFASKGHRILPSASLIPKDDPTLLLTVAGMVPFKPYFMRKVEPPFPRAT 62
Query: 108 TSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
TSQ+C+RT D+E VG+T+RHHTFFEMLGNFSFGDYFK EAI WAWEF T LP ++LW
Sbjct: 63 TSQKCVRTPDLEVVGKTARHHTFFEMLGNFSFGDYFKAEAIPWAWEFVTEVLKLPIDQLW 122
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCS 227
I+V+ +D+EA +W ++ GV E IK +N W +G GPCG CSEIY D RGC
Sbjct: 123 ITVHPEDEEAKNLWIEKTGVSPERIKY--DPENLWAAGPVGPCGYCSEIYVDLGESRGCG 180
Query: 228 --DVDLGDDT-RFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNY 284
D LG D RF+E +NLVFMQYN+ + G L PL ++NIDTG+GLERIA ++Q +N+
Sbjct: 181 KPDCALGCDCDRFLEIWNLVFMQYNRDESGLLTPLPKQNIDTGMGLERIASVMQGAASNF 240
Query: 285 ETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVV 344
+TDL PII K SEL+ + Y S + ++ +K++ DH RA+ ++LSDG+ P + GRGYV+
Sbjct: 241 DTDLFLPIINKVSELSGIPYHDS-PKNDVAMKVVADHTRAVSFMLSDGIRPGSEGRGYVL 299
Query: 345 RRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKR 404
RR++RRA+R RLLGI + LE FL I ++ +H ++K E IL L+
Sbjct: 300 RRILRRAIRYARLLGID---KPFLEQIFL--IIQRDY---SHHYPELKENENFILNHLRL 351
Query: 405 EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAE 464
EE F TLE+G Q+L D + +E+G LSG DAF LY+T+GFPVE+T+E+
Sbjct: 352 EEKNFQATLEQG----TQILQDKVKTLQEAGET-MLSGADAFYLYETYGFPVELTEEMLI 406
Query: 465 EHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEK---IPDTEFLGYDTLSAK 521
E G+SVDM+ F+ E RR ++ +K +V +SA ++EK + T FLGY L+A
Sbjct: 407 EQGMSVDMETFNAAAEEHRRLAKEQSQQMK-AVQESAAISEKAKALGTTPFLGYHELAAH 465
Query: 522 AIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEV 581
VE+L +G+ V ++G +V + L +PFYAESGGQI D G + + + ++EV
Sbjct: 466 TRVEALFRDGEEVKDAAEGDEVLIFLRESPFYAESGGQISDSGLI---RSLRAEAKLIEV 522
Query: 582 KDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQ 641
K K G+V+ H+ + +GVL G EVEA+VD LR HH+ATHLLQ+AL+ V+G+
Sbjct: 523 K--KGVTGTVY-HRFLLTQGVLHTGDEVEALVDEHLRLATARHHSATHLLQSALRAVLGE 579
Query: 642 ETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAG 701
QAGSLV DRLRFDF L EL+ +E L+N + + + M+LD AK +G
Sbjct: 580 HVQQAGSLVTPDRLRFDFTHFSALTSAELQRVEDLLNKAVLANMPVAAEEMSLDAAKASG 639
Query: 702 AIAMFGEKYGEQVKISS 718
A A+FGEKYG+ V++ S
Sbjct: 640 ATALFGEKYGDTVRVVS 656
>gi|345429608|ref|YP_004822726.1| alanyl-tRNA synthetase [Haemophilus parainfluenzae T3T1]
gi|301155669|emb|CBW15137.1| alanyl-tRNA synthetase [Haemophilus parainfluenzae T3T1]
Length = 874
Score = 582 bits (1500), Expect = e-163, Method: Compositional matrix adjust.
Identities = 316/681 (46%), Positives = 437/681 (64%), Gaps = 50/681 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVPE DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 7 IRQSFLDFFHSKGHQVVASSSLVPENDPTLLFTNAGMNQFKDVFLGMDKRPYSRATTAQR 66
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AI +AWE+ T GLP +
Sbjct: 67 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAINFAWEYLTSPQWLGLPKEK 126
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE D+EA++IW+KEVGVP E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 127 LWVTVYETDNEAYDIWHKEVGVPAERIIRIGDNKGAPYASDNFWAMGDTGPCGPCTEIFY 186
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++E L + ++DTG+GLERI+
Sbjct: 187 D-HGDHIWGGPPGSPEEDGDRYIEIWNVVFMQFNRQADGTMEKLPRPSVDTGMGLERISA 245
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NYE D+ +I K +E+ + D TN +L++I DH+R+ YL++DGV P
Sbjct: 246 VLQHVNSNYEIDIFQKLIAKTAEVVGTT-----DLTNKSLRVIADHIRSCAYLIADGVIP 300
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN GRGYV+RR+IRRAVR G LLG K AF + IE+ +VK ++
Sbjct: 301 SNEGRGYVLRRIIRRAVRHGHLLGAKE--------AFFYKLVPTLIEVMAEAGKEVKEKQ 352
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
+ + L+ EE +F +TLERG LLD DAL++ ++ LSG+ AF LYDT+GFP
Sbjct: 353 ANVEKLLRLEEEQFARTLERGLSLLD----DALAQVKDG----VLSGEVAFKLYDTYGFP 404
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGY 515
+++T +V E +++D GF+ EME QR ++Q+A D ++ +T+F GY
Sbjct: 405 LDLTADVCRERDIAIDEAGFEREMEAQRLRAQSASQFGM----DYNNVIRVEGETKFEGY 460
Query: 516 DTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
+ A V +L +GK V ++ G V+L TPFYAESGGQIGD G+L +QG
Sbjct: 461 TESESLAKVTALFHDGKSVDSITAGQSAVVILENTPFYAESGGQIGDSGYL-TSQGIQ-- 517
Query: 576 TAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAAL 635
VKD +K G VF H G + +G L+VG+ V A+VD R + ++H+ATHLL AAL
Sbjct: 518 ---FNVKDTQK-YGQVFGHIGELEQGTLKVGQTVNAVVDAARRHQTSLNHSATHLLHAAL 573
Query: 636 KKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALD 695
++V+G Q GSLV+ LRFDF + +L EIE L+N + + ++QT VM ++
Sbjct: 574 RQVLGHHVVQKGSLVSDTALRFDFAHPEAITKAQLNEIETLVNQKVRENFVVQTDVMDIE 633
Query: 696 DAKRAGAIAMFGEKYGEQVKI 716
AK GA+A+FGEKY + V++
Sbjct: 634 AAKAKGAMALFGEKYSDVVRV 654
>gi|251793474|ref|YP_003008203.1| alanyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700]
gi|422337380|ref|ZP_16418351.1| alanyl-tRNA synthetase [Aggregatibacter aphrophilus F0387]
gi|247534870|gb|ACS98116.1| alanyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700]
gi|353345407|gb|EHB89702.1| alanyl-tRNA synthetase [Aggregatibacter aphrophilus F0387]
Length = 874
Score = 582 bits (1500), Expect = e-163, Method: Compositional matrix adjust.
Identities = 317/687 (46%), Positives = 435/687 (63%), Gaps = 62/687 (9%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ +LDF+ S+GH+V+ S+SLVP+ DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 7 IRQSYLDFFHSKGHQVVASSSLVPDNDPTLLFTNAGMNQFKNVFLGLEKRPYSRATTAQR 66
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AI + WEF T GLP +
Sbjct: 67 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIHYGWEFLTSPQWLGLPKEK 126
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE D+EA++IW+ E+G+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 127 LWVTVYETDEEAYKIWHDEIGIPAERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 186
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N+ DG++E L + ++DTG+GLERI+
Sbjct: 187 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRHADGTMEKLPKPSVDTGMGLERISA 245
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ D+ +I K +EL D N +L++I DH+R+ YL++DGV P
Sbjct: 246 VLQHVNSNYDIDIFKTLIAKVAELTG-----EKDLNNKSLRVIADHIRSCAYLIADGVVP 300
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN GRGYV+RR+IRRAVR G LLG AF + IE+ DVK +
Sbjct: 301 SNEGRGYVLRRIIRRAVRHGHLLGATE--------AFFYKLVPTLIEVMAQAGEDVKKHQ 352
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
+ + L+ EE +F +TLERG LLD+ LA+ LSG+ AF LYDT+GFP
Sbjct: 353 ATVEKFLRLEEEQFARTLERGLTLLDEALANVKDNV--------LSGKVAFKLYDTYGFP 404
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAEKIPD 509
+++T +V E G+++D GF+ EM +QR ++Q+A +N V + VD +
Sbjct: 405 LDLTADVCRERGIAIDEAGFEREMASQRVRAQSASQFGMDYNNV-IRVDGT--------- 454
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
T F GY + A V +L +GK V ++ G V+L TPFYAESGGQIGD G L
Sbjct: 455 TRFEGYTESESLAKVTALFHDGKAVESITAGQRAVVILENTPFYAESGGQIGDIGRL--- 511
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G + +VKD +K G VF H G + +G L VG+ V A+VD RQ+ ++H+ATH
Sbjct: 512 EGNG---FIFDVKDTQK-YGQVFGHIGELTQGSLSVGQSVNAVVDDVRRQQISLNHSATH 567
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
LL AAL++V+G+ +Q GSLV+ LRFDF H + +L E+ER++N + N +QT
Sbjct: 568 LLHAALRQVLGEHVAQKGSLVSDALLRFDFAHHEAISKEQLAEVERIVNQQVRANNPVQT 627
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKI 716
+ MALD AK GA+A+FGEKY EQV++
Sbjct: 628 EAMALDAAKAKGAMALFGEKYSEQVRV 654
>gi|419802642|ref|ZP_14327827.1| alanine--tRNA ligase [Haemophilus parainfluenzae HK262]
gi|385189824|gb|EIF37279.1| alanine--tRNA ligase [Haemophilus parainfluenzae HK262]
Length = 874
Score = 582 bits (1499), Expect = e-163, Method: Compositional matrix adjust.
Identities = 316/681 (46%), Positives = 437/681 (64%), Gaps = 50/681 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVPE DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 7 IRQSFLDFFHSKGHQVVASSSLVPENDPTLLFTNAGMNQFKDVFLGMDKRPYSRATTAQR 66
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AI +AWEF T GLP +
Sbjct: 67 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAINFAWEFLTSPRWLGLPKEK 126
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE D+EA++IW+KEVGVP E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 127 LWVTVYETDNEAYDIWHKEVGVPAERIIRIGDNKGAPYASDNFWAMGDTGPCGPCTEIFY 186
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++E L + ++DTG+GLERI+
Sbjct: 187 D-HGDHIWGGPPGSPEEDGDRYIEIWNVVFMQFNRQADGTMEKLPRPSVDTGMGLERISA 245
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NYE D+ +I K +E+ + D TN +L++I DH+R+ YL++DGV P
Sbjct: 246 VLQHVNSNYEIDIFQKLIAKTAEIVGTT-----DLTNKSLRVIADHIRSCAYLIADGVIP 300
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN GRGYV+RR+IRRAVR G LLG K AF + IE+ +VK ++
Sbjct: 301 SNEGRGYVLRRIIRRAVRHGHLLGAKE--------AFFYKLVPTLIEVMAEAGKEVKEKQ 352
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
+ + L+ EE +F +TLERG LLD DAL++ ++ LSG+ AF LYDT+GFP
Sbjct: 353 ANVEKLLRLEEEQFARTLERGLSLLD----DALAQVKDG----VLSGEVAFKLYDTYGFP 404
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGY 515
+++T +V E +++D GF+ EME QR ++Q+A D ++ +T+F GY
Sbjct: 405 LDLTADVCRERDIAIDEAGFEREMEAQRLRAQSASQFGM----DYNNVIRVEGETKFEGY 460
Query: 516 DTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
+ A V +L +GK V ++ G V+L TPFYAESGGQIGD G+L +QG
Sbjct: 461 TESESLAKVTALFHDGKSVDSITAGQSAVVILENTPFYAESGGQIGDSGYL-TSQGIQ-- 517
Query: 576 TAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAAL 635
VKD +K G VF H G + +G L+VG+ + A+VD R + ++H+ATHLL AAL
Sbjct: 518 ---FNVKDTQK-YGQVFGHIGELEQGTLKVGQTLNAVVDAARRNQTSLNHSATHLLHAAL 573
Query: 636 KKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALD 695
++V+G Q GSLV+ LRFDF + +L EIE L+N + + ++QT VM ++
Sbjct: 574 RQVLGHHVVQKGSLVSDTALRFDFAHPEAITKAQLNEIETLVNQKVRENFVVQTDVMDIE 633
Query: 696 DAKRAGAIAMFGEKYGEQVKI 716
AK GA+A+FGEKY + V++
Sbjct: 634 AAKAKGAMALFGEKYADVVRV 654
>gi|398801686|ref|ZP_10560924.1| alanine--tRNA ligase [Pantoea sp. GM01]
gi|398091370|gb|EJL81815.1| alanine--tRNA ligase [Pantoea sp. GM01]
Length = 875
Score = 581 bits (1498), Expect = e-163, Method: Compositional matrix adjust.
Identities = 311/688 (45%), Positives = 435/688 (63%), Gaps = 64/688 (9%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM+QFK +FLG+ R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMVQFKDVFLGQDKRDYARATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFKKEAI +AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKKEAIAYAWELLTGEQWFKLPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEAFEIW ++GVP E I R+G A DNFW G TGPCGPC+EI++
Sbjct: 128 LWVTVYETDDEAFEIWANDIGVPRERIIRIGDNKGSAFASDNFWQMGDTGPCGPCTEIFF 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG+++PL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMQPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NYE DL +I+ +++ + D N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYEIDLFAKLIQSVAQVTGAT-----DLNNKSLRVIADHIRSCAFLIADGVIP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K AF + I++ D+K ++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAKE--------AFFYKLVAPLIDVMGAAGEDLKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
+ + LK EE +F +TLERG LLD+ LA T L G+ F LYDTFGFP
Sbjct: 354 KHVENALKNEEEQFAKTLERGLALLDEELAKLQGDT--------LDGETVFRLYDTFGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA-------HNAVKLSVDDSADLAEKIP 508
++T +V E + +D GF+ ME QR++++ A +N +++ D+A
Sbjct: 406 ADLTADVCRERNLKIDEAGFEAAMEQQRQRAREASGFGADYNNVIRI---DAA------- 455
Query: 509 DTEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYV 568
T+F GYD L A+V++L V+G+ V ++S G D V+L+ TPFY ESGGQ+GD G L
Sbjct: 456 -TDFKGYDHLELNAVVQALFVDGQQVEQISAGQDAVVVLDETPFYGESGGQVGDTGVL-- 512
Query: 569 TQGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTAT 628
G N + +V + + K++G H G + G L VG + A VD R R +++H+AT
Sbjct: 513 -AGQNAEFSVQDTQKYGKAIG----HIGKLSSGQLRVGDRLHAQVDETRRARIRLNHSAT 567
Query: 629 HLLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQ 688
HLL AAL++V+G Q GSLV LRFDF+ + E+ ++E ++N I ++
Sbjct: 568 HLLHAALRQVLGDHVGQKGSLVNDKYLRFDFSHFEAMKPQEIRQVEDIVNAQIRRNLAVE 627
Query: 689 TKVMALDDAKRAGAIAMFGEKYGEQVKI 716
T++M LDDAK GA+A+FGEKY ++V++
Sbjct: 628 TEIMDLDDAKEKGAMALFGEKYDQRVRV 655
>gi|423073471|ref|ZP_17062210.1| alanine--tRNA ligase [Desulfitobacterium hafniense DP7]
gi|361855777|gb|EHL07735.1| alanine--tRNA ligase [Desulfitobacterium hafniense DP7]
Length = 875
Score = 581 bits (1498), Expect = e-163, Method: Compositional matrix adjust.
Identities = 321/677 (47%), Positives = 446/677 (65%), Gaps = 30/677 (4%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
+G+ +R FL+F+AS+GH++LPSASL+P +DPT+LLT+AGM+ FKP F+ KV PRA
Sbjct: 3 TGNQLRDMFLNFFASKGHRILPSASLIPKDDPTLLLTVAGMVPFKPYFMRKVEPPFPRAT 62
Query: 108 TSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
TSQ+C+RT D+E VG+T+RHHTFFEMLGNFSFGDYFK EAI WAWEF T LP ++LW
Sbjct: 63 TSQKCVRTPDLEVVGKTARHHTFFEMLGNFSFGDYFKAEAIPWAWEFVTEVLKLPIDQLW 122
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCS 227
I+V+ +D+EA +W ++ GV E IK +N W +G GPCG CSEIY D RGC
Sbjct: 123 ITVHPEDEEAKNLWIEKTGVSPERIKY--DPENLWAAGPVGPCGYCSEIYVDLGESRGCG 180
Query: 228 --DVDLGDDT-RFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNY 284
D LG D RF+E +NLVFMQYN+ + G L PL ++NIDTG+GLERIA ++Q +N+
Sbjct: 181 KPDCALGCDCDRFLEIWNLVFMQYNRDESGLLTPLPKQNIDTGMGLERIASVMQGAASNF 240
Query: 285 ETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVV 344
+TDL PII K SEL+ + Y S + ++ +K++ DH RA+ ++LSDG+ P + GRGYV+
Sbjct: 241 DTDLFLPIINKVSELSGIPYHDS-PKNDVAMKVVADHTRAVSFMLSDGIRPGSEGRGYVL 299
Query: 345 RRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKR 404
RR++RRA+R RLLGI + LE FL I ++ +H ++K E IL L+
Sbjct: 300 RRILRRAIRYARLLGID---KPFLEQIFL--IIQRDY---SHHYPELKENENFILNHLRL 351
Query: 405 EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAE 464
EE F TLE+G Q+L + + +E+G L+G DAF LY+T+GFPVE+T+E+
Sbjct: 352 EEKNFQATLEQG----TQILQEKVKTLQEAGET-MLNGADAFYLYETYGFPVELTEEMLI 406
Query: 465 EHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEK---IPDTEFLGYDTLSAK 521
E G+SVDM+ F+ E RR ++ +K +V +SA ++EK + T FLGY L+A
Sbjct: 407 EQGMSVDMEAFNAAAEEHRRLAKEQSQQMK-AVQESAAISEKAKALGTTPFLGYHELAAH 465
Query: 522 AIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEV 581
VE+L +G+ V ++G +V + L +PFYAESGGQI D G + + + ++EV
Sbjct: 466 TRVEALFRDGEEVKDAAEGDEVLIFLRESPFYAESGGQISDSGLI---RSLRAEAKLIEV 522
Query: 582 KDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQ 641
K K G+V+ H+ + +GVL G EVEA+VD LR HH+ATHLLQAAL+ V+G+
Sbjct: 523 K--KGVTGTVY-HRFLLTQGVLHTGDEVEALVDEHLRLATARHHSATHLLQAALRAVLGE 579
Query: 642 ETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAG 701
QAGSLV DRLRFDF L EL+ +E L+N + + + M+LD AK +G
Sbjct: 580 HVQQAGSLVTPDRLRFDFTHFSALTSAELQRVEDLLNEAVLANMPVAAEEMSLDAAKASG 639
Query: 702 AIAMFGEKYGEQVKISS 718
A A+FGEKYG+ V++ S
Sbjct: 640 ATALFGEKYGDTVRVVS 656
>gi|325579107|ref|ZP_08149063.1| alanine--tRNA ligase [Haemophilus parainfluenzae ATCC 33392]
gi|325159342|gb|EGC71476.1| alanine--tRNA ligase [Haemophilus parainfluenzae ATCC 33392]
Length = 874
Score = 581 bits (1497), Expect = e-163, Method: Compositional matrix adjust.
Identities = 316/681 (46%), Positives = 436/681 (64%), Gaps = 50/681 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVPE DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 7 IRQSFLDFFHSKGHQVVASSSLVPENDPTLLFTNAGMNQFKDVFLGMDKRPYSRATTAQR 66
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AI +AWE+ T GLP +
Sbjct: 67 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAINFAWEYLTSPQWLGLPKEK 126
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE D+EA++IW+KEVGVP E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 127 LWVTVYETDNEAYDIWHKEVGVPAERIIRIGDNKGAPYASDNFWAMGDTGPCGPCTEIFY 186
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N+ DG++E L + ++DTG+GLERI+
Sbjct: 187 D-HGDHIWGGPPGSPEEDGDRYIEIWNVVFMQFNRLADGTMEKLPRPSVDTGMGLERISA 245
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NYE D+ +I K +E+ + D TN +L++I DH+R+ YL++DGV P
Sbjct: 246 VLQHVNSNYEIDIFQKLIAKTAEVVGTT-----DLTNKSLRVIADHIRSCAYLIADGVIP 300
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN GRGYV+RR+IRRAVR G LLG K AF + IE+ +VK ++
Sbjct: 301 SNEGRGYVLRRIIRRAVRHGHLLGAKE--------AFFYKLVPTLIEVMAEAGKEVKEKQ 352
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
+ + L+ EE +F +TLERG LLD DAL++ ++ LSG+ AF LYDT+GFP
Sbjct: 353 ANVEKLLRLEEEQFARTLERGLSLLD----DALAQVKDG----VLSGEVAFKLYDTYGFP 404
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGY 515
+++T +V E +++D GF+ EME QR ++Q+A D ++ +T+F GY
Sbjct: 405 LDLTADVCRERDIAIDEAGFEREMEAQRLRAQSASQFGM----DYNNVIRVEGETKFEGY 460
Query: 516 DTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
+ A V +L +GK V ++ G V+L TPFYAESGGQIGD G+L +QG
Sbjct: 461 TESESLAKVTALFHDGKSVESITAGQSAVVILENTPFYAESGGQIGDSGYL-TSQGIQ-- 517
Query: 576 TAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAAL 635
VKD +K G VF H G + +G L+VG+ V A+VD R + ++H+ATHLL AAL
Sbjct: 518 ---FNVKDTQK-YGQVFGHIGELEQGTLKVGQTVNAVVDAARRHQTSLNHSATHLLHAAL 573
Query: 636 KKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALD 695
++V+G Q GSLV+ LRFDF + +L EIE L+N + + ++QT VM ++
Sbjct: 574 RQVLGHHVVQKGSLVSDTALRFDFAHPEAITKAQLNEIETLVNQKVRENFVVQTDVMDIE 633
Query: 696 DAKRAGAIAMFGEKYGEQVKI 716
AK GA+A+FGEKY + V++
Sbjct: 634 AAKAKGAMALFGEKYADVVRV 654
>gi|338731532|ref|YP_004660924.1| alanyl-tRNA synthetase [Thermotoga thermarum DSM 5069]
gi|335365883|gb|AEH51828.1| alanyl-tRNA synthetase [Thermotoga thermarum DSM 5069]
Length = 863
Score = 581 bits (1497), Expect = e-163, Method: Compositional matrix adjust.
Identities = 310/672 (46%), Positives = 429/672 (63%), Gaps = 33/672 (4%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
+G+ IRK+FL F+ S+GHKVLPSASL+P+DP +L T+AGM+ FKPIF GKV R AT
Sbjct: 2 TGNEIRKQFLAFFESKGHKVLPSASLIPDDPQLLFTVAGMVPFKPIFWGKVEPVYTRVAT 61
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
Q+C+RTND+ENVGRT RHHTFFEMLGNFSFGDYFKKEAI WAWEF T LP +LW+
Sbjct: 62 CQKCLRTNDIENVGRTPRHHTFFEMLGNFSFGDYFKKEAILWAWEFVTKVLKLPEEKLWV 121
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWN-SGATGPCGPCSEIYYDFHP--DRG 225
++Y+DDDEAF IW VGVP + I RMG D NFW +G TGPCGPCSEI+YD +RG
Sbjct: 122 TIYKDDDEAFMIWRDLVGVPEKKIIRMGKDTNFWGPAGPTGPCGPCSEIHYDTGAADERG 181
Query: 226 CSD-VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNY 284
+ DD RF+E +NLVF ++ + ++G L PL +KNIDTG GLER+ ++Q V +N+
Sbjct: 182 EEESTPATDDKRFLEIWNLVFTEFYQDEEGKLHPLPKKNIDTGAGLERVTAVVQGVSSNF 241
Query: 285 ETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVV 344
ETDL PI+ + E++ V Y Q + + ++++++I DH RA+ +L++DGVFPSN RGYV+
Sbjct: 242 ETDLFAPIMSRIEEISGVKYKQ-DPQKDISMRVIADHSRAVSFLIADGVFPSNEERGYVL 300
Query: 345 RRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKR 404
RR++RRAVR G LLG LE FL + + IE + ++ R Q ILE K
Sbjct: 301 RRILRRAVRHGVLLG--------LEKTFLYLVNDAVIEAMKDVYPELAERRQLILEVTKA 352
Query: 405 EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAE 464
EE RF +T+ +G +LL +++A S +SG+D F LYDT+GFP +I +VA+
Sbjct: 353 EEERFFKTIVQGSELLKEIIAK---------SKDVISGEDLFRLYDTYGFPPDIVIDVAK 403
Query: 465 EHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTLSAKAIV 524
E G+ VD++GF+ M+ QR +++ A V + + K T+FLGY+ +A V
Sbjct: 404 EKGLKVDLEGFEKLMQAQRERAREARGEVAYAKKTVFEDLAKTIQTKFLGYEKFECQAKV 463
Query: 525 ESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDV 584
++ PV S+ EV+ ++T FYAE GGQ+ D G + G EV+ V
Sbjct: 464 VAM---DPPV--ASEEQKAEVVFDQTVFYAEKGGQVSDTGVIVWQDGQ------AEVEYV 512
Query: 585 KKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETS 644
+ V H T+++G L+ +D + R +HTATHLL AAL+KV+G
Sbjct: 513 YVPVEGVVSHVVTVKKGTLKPDLVCTLKIDVERRLDTMRNHTATHLLHAALRKVLGTHVR 572
Query: 645 QAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIA 704
Q GSLVA DRLRFDF ++ L + EL+++E L+N I +A + + +A GAIA
Sbjct: 573 QFGSLVAPDRLRFDFTHYQALKEEELQQVENLVNEAIMNAIPVIVEEKPFKEAVAEGAIA 632
Query: 705 MFGEKYGEQVKI 716
+FGEKYGE V++
Sbjct: 633 LFGEKYGEFVRV 644
>gi|416893272|ref|ZP_11924513.1| alanyl-tRNA synthetase [Aggregatibacter aphrophilus ATCC 33389]
gi|347814040|gb|EGY30691.1| alanyl-tRNA synthetase [Aggregatibacter aphrophilus ATCC 33389]
Length = 874
Score = 580 bits (1496), Expect = e-163, Method: Compositional matrix adjust.
Identities = 314/681 (46%), Positives = 430/681 (63%), Gaps = 50/681 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ +LDF+ S+GH+V+ S+SLVP+ DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 7 IRQSYLDFFHSKGHQVVASSSLVPDNDPTLLFTNAGMNQFKNVFLGLEKRLYSRATTAQR 66
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AI + WEF T GLP +
Sbjct: 67 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIHYGWEFLTSPQWLGLPKEK 126
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE D+EA++IW+ E+G+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 127 LWVTVYETDEEAYKIWHDEIGIPAERIIRIGDNKGTPYASDNFWQMGDTGPCGPCTEIFY 186
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N+ DG++E L + ++DTG+GLERI+
Sbjct: 187 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRHADGTMEKLPKPSVDTGMGLERISA 245
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY D+ +I K +EL D N +L++I DH+R+ YL++DGV P
Sbjct: 246 VLQHVNSNYNIDIFKTLIAKVAELTG-----EKDLNNKSLRVIADHIRSCAYLIADGVVP 300
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN GRGYV+RR+IRRAVR G LLG AF + IE+ DVK +
Sbjct: 301 SNEGRGYVLRRIIRRAVRHGHLLGATE--------AFFYKLVPTLIEVMAQAGEDVKKHQ 352
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
+ + L+ EE +F +TLERG LLD+ LA+ LSG+ AF LYDT+GFP
Sbjct: 353 ATVEKFLRLEEEQFARTLERGLTLLDEALANVKDNV--------LSGEVAFKLYDTYGFP 404
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGY 515
+++T +V E G+++D GF+ EM +QR ++Q+A D ++ T F GY
Sbjct: 405 LDLTADVCRERGIAIDEAGFEREMASQRVRAQSASQFGM----DYNNVIRVDGITRFEGY 460
Query: 516 DTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
+ A V +L +GK V ++ G V+L TPFYAESGGQIGD G L +G
Sbjct: 461 TESESLAKVTALFHDGKAVESITAGQSAVVILENTPFYAESGGQIGDIGRL---EGNG-- 515
Query: 576 TAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAAL 635
+ +VKD +K G VF H G + +G L VG+ V A+VD RQ+ ++H+ATHLL AAL
Sbjct: 516 -FIFDVKDTQK-YGQVFGHIGELTQGSLSVGQSVNAVVDDVRRQQISLNHSATHLLHAAL 573
Query: 636 KKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALD 695
++V+G+ +Q GSLV+ LRFDF H + +L E+ER++N + N +QT+VM LD
Sbjct: 574 RQVLGEHVAQKGSLVSDALLRFDFAHHEAIRKEQLAEVERIVNQQVRANNPVQTEVMLLD 633
Query: 696 DAKRAGAIAMFGEKYGEQVKI 716
AK GA+A+FGEKY EQV++
Sbjct: 634 AAKAKGAMALFGEKYSEQVRV 654
>gi|407692346|ref|YP_006817135.1| alanyl-tRNA ligase [Actinobacillus suis H91-0380]
gi|407388403|gb|AFU18896.1| alanyl-tRNA ligase [Actinobacillus suis H91-0380]
Length = 874
Score = 580 bits (1495), Expect = e-163, Method: Compositional matrix adjust.
Identities = 311/683 (45%), Positives = 436/683 (63%), Gaps = 54/683 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH V+PS+SLVPE DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 7 IRQSFLDFFHSKGHTVVPSSSLVPENDPTLLFTNAGMNQFKDVFLGLEKRPYTRATTAQR 66
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEM+GNFSFGDYFK++AIQ+ WE+ T GLP +
Sbjct: 67 CVRAGGKHNDLENVGYTARHHTFFEMMGNFSFGDYFKQDAIQFGWEYLTSPQWLGLPKEK 126
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
L+++VYE DDEA++IWNK VGVP +HI R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 127 LYVTVYETDDEAYDIWNKIVGVPTDHIIRIGDNKGAPYASDNFWAMGDTGPCGPCTEIFY 186
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++E L + ++DTG+GLER+
Sbjct: 187 D-HGDTFWGGLPGTPEEDGDRYIEVWNIVFMQFNRQADGTMEKLPKPSVDTGMGLERMTA 245
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
++Q V +NYETD+ +IK+ + L NV+ D N +L+++ DH+RA YL++DGV P
Sbjct: 246 VMQHVNSNYETDIFQTLIKEVAGLLNVT-----DLDNKSLRVVADHIRACSYLIADGVIP 300
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN GRGYV+RR+IRRAVR G LLG K AF + + H + ++
Sbjct: 301 SNEGRGYVLRRIIRRAVRHGNLLGAKE--------AFFYKLVPTLATVMGHAGEILTQKQ 352
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
I + LK EE +F +TLERG LL+ DAL++ + LSG+ AF LYDT+GFP
Sbjct: 353 AHIQKTLKAEEEQFARTLERGLALLE----DALTKVENN----TLSGEVAFKLYDTYGFP 404
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGY 515
+++T +V E +++D GF+ EM QR +++A+ N D ++ + T+F+GY
Sbjct: 405 LDLTADVCRERNITIDEAGFEAEMSAQRERAKASSNFGT----DYNNVIKVDGQTDFIGY 460
Query: 516 DTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
D L A+A V L NGK V + G ++L++TPFYAE GGQ+GD G +
Sbjct: 461 DNLEAQATVVGLFSNGKAVDTIHSGESAVIILDQTPFYAEMGGQVGDSGLI--------S 512
Query: 576 TAVVE--VKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQA 633
T + E V D +K G VF H G + G L +G +V A V+ RQ +H+ATHLL +
Sbjct: 513 TEICEFTVSDTQK-YGQVFGHIGQLTSGSLAIGDKVTAHVEINRRQAITANHSATHLLHS 571
Query: 634 ALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMA 693
AL++V+G +Q GSLV+ D LRFDF+ + +LEEIER++N I + + + M
Sbjct: 572 ALREVLGDHVAQKGSLVSEDALRFDFSQPEAITKAQLEEIERIVNRKIRENIQVVIETMD 631
Query: 694 LDDAKRAGAIAMFGEKYGEQVKI 716
++ AK+ GA+A+FGEKYG+ V++
Sbjct: 632 IESAKQKGAMALFGEKYGDVVRV 654
>gi|322514279|ref|ZP_08067338.1| alanine--tRNA ligase [Actinobacillus ureae ATCC 25976]
gi|322119833|gb|EFX91853.1| alanine--tRNA ligase [Actinobacillus ureae ATCC 25976]
Length = 874
Score = 580 bits (1495), Expect = e-163, Method: Compositional matrix adjust.
Identities = 310/683 (45%), Positives = 437/683 (63%), Gaps = 54/683 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH V+PS+SLVPE DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 7 IRQSFLDFFHSKGHTVVPSSSLVPENDPTLLFTNAGMNQFKDVFLGLEKRPYTRATTAQR 66
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTV--EFGLPANR 165
C+R ND+ENVG T+RHHTFFEM+GNFSFGDYFK++AIQ+ WE+ T GLP +
Sbjct: 67 CVRAGGKHNDLENVGYTARHHTFFEMMGNFSFGDYFKQDAIQFGWEYLTSLQWLGLPKEK 126
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
L+++VYE DDEA++IWNK VGVP +HI R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 127 LYVTVYETDDEAYDIWNKIVGVPTDHIIRIGDNKGAPYASDNFWAMGDTGPCGPCTEIFY 186
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++E L + ++DTG+GLER+
Sbjct: 187 D-HGDTFWGGLPGTPEEDGDRYIEVWNIVFMQFNRQADGTMEKLPKPSVDTGMGLERMTA 245
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
++Q V +NYETD+ +IK+ + L NV+ D N +L+++ DH+RA YL++DGV P
Sbjct: 246 VMQHVNSNYETDIFQTLIKEVAGLLNVT-----DLDNKSLRVVADHIRACSYLIADGVIP 300
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN GRGYV+RR+IRRAVR G LLG K AF + + H + ++
Sbjct: 301 SNEGRGYVLRRIIRRAVRHGNLLGAKE--------AFFYKLVPTLATVMGHAGEILTQKQ 352
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
I + LK EE +F +TLERG LL+ DAL++ + LSG+ AF LYDT+GFP
Sbjct: 353 AHIQKTLKAEEEQFARTLERGLALLE----DALTKVENN----TLSGEVAFKLYDTYGFP 404
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGY 515
+++T +V E +++D GF+ EM QR +++A+ N D +++ + T+F+GY
Sbjct: 405 LDLTADVCRERNITIDEAGFEAEMSAQRERAKASSNFGT----DYSNVIKVDGQTDFIGY 460
Query: 516 DTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
D L A+A + L NGK V + G ++L++TPFYAE GGQ+GD G +
Sbjct: 461 DNLEAQATIVGLFSNGKAVDTIHSGESAVIILDQTPFYAEMGGQVGDNGLI--------S 512
Query: 576 TAVVE--VKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQA 633
T + E V D +K G VF H G + G L +G +V A V+ RQ +H+ATHLL +
Sbjct: 513 TEICEFTVSDTQK-YGQVFGHVGQLTSGSLAIGDKVTAHVEINRRQAITANHSATHLLHS 571
Query: 634 ALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMA 693
AL++V+G +Q GSLV+ D LRFDF+ + +LEEIER++N I + + + M
Sbjct: 572 ALREVLGDHVAQKGSLVSEDALRFDFSQPEAITKAQLEEIERIVNRNIRENIQVVIETMD 631
Query: 694 LDDAKRAGAIAMFGEKYGEQVKI 716
++ AK+ GA+A+FGEKYG+ V++
Sbjct: 632 IESAKQKGAMALFGEKYGDVVRV 654
>gi|218706191|ref|YP_002413710.1| alanyl-tRNA synthetase [Escherichia coli UMN026]
gi|293406188|ref|ZP_06650114.1| alaS [Escherichia coli FVEC1412]
gi|298381926|ref|ZP_06991523.1| alanyl-tRNA synthetase [Escherichia coli FVEC1302]
gi|331664248|ref|ZP_08365154.1| alanine--tRNA ligase [Escherichia coli TA143]
gi|387608333|ref|YP_006097189.1| alanyl-tRNA synthetase [Escherichia coli 042]
gi|417587703|ref|ZP_12238469.1| alanyl-tRNA synthetase [Escherichia coli STEC_C165-02]
gi|419934472|ref|ZP_14451580.1| alanyl-tRNA synthetase [Escherichia coli 576-1]
gi|432354602|ref|ZP_19597871.1| alanyl-tRNA synthetase [Escherichia coli KTE2]
gi|432402951|ref|ZP_19645701.1| alanyl-tRNA synthetase [Escherichia coli KTE26]
gi|432427221|ref|ZP_19669714.1| alanyl-tRNA synthetase [Escherichia coli KTE181]
gi|432461682|ref|ZP_19703826.1| alanyl-tRNA synthetase [Escherichia coli KTE204]
gi|432476910|ref|ZP_19718904.1| alanyl-tRNA synthetase [Escherichia coli KTE208]
gi|432490498|ref|ZP_19732365.1| alanyl-tRNA synthetase [Escherichia coli KTE213]
gi|432518779|ref|ZP_19755963.1| alanyl-tRNA synthetase [Escherichia coli KTE228]
gi|432538949|ref|ZP_19775848.1| alanyl-tRNA synthetase [Escherichia coli KTE235]
gi|432632447|ref|ZP_19868370.1| alanyl-tRNA synthetase [Escherichia coli KTE80]
gi|432642159|ref|ZP_19877989.1| alanyl-tRNA synthetase [Escherichia coli KTE83]
gi|432667153|ref|ZP_19902731.1| alanyl-tRNA synthetase [Escherichia coli KTE116]
gi|432771610|ref|ZP_20005932.1| alanyl-tRNA synthetase [Escherichia coli KTE50]
gi|432775737|ref|ZP_20010004.1| alanyl-tRNA synthetase [Escherichia coli KTE54]
gi|432840522|ref|ZP_20073985.1| alanyl-tRNA synthetase [Escherichia coli KTE140]
gi|432887785|ref|ZP_20101713.1| alanyl-tRNA synthetase [Escherichia coli KTE158]
gi|432913949|ref|ZP_20119534.1| alanyl-tRNA synthetase [Escherichia coli KTE190]
gi|432963033|ref|ZP_20152452.1| alanyl-tRNA synthetase [Escherichia coli KTE202]
gi|433019766|ref|ZP_20207946.1| alanyl-tRNA synthetase [Escherichia coli KTE105]
gi|433054329|ref|ZP_20241499.1| alanyl-tRNA synthetase [Escherichia coli KTE122]
gi|433064100|ref|ZP_20251014.1| alanyl-tRNA synthetase [Escherichia coli KTE125]
gi|433068976|ref|ZP_20255757.1| alanyl-tRNA synthetase [Escherichia coli KTE128]
gi|433159714|ref|ZP_20344545.1| alanyl-tRNA synthetase [Escherichia coli KTE177]
gi|433179518|ref|ZP_20363909.1| alanyl-tRNA synthetase [Escherichia coli KTE82]
gi|433204404|ref|ZP_20388165.1| alanyl-tRNA synthetase [Escherichia coli KTE95]
gi|218433288|emb|CAR14188.1| alanyl-tRNA synthetase [Escherichia coli UMN026]
gi|284922633|emb|CBG35721.1| alanyl-tRNA synthetase [Escherichia coli 042]
gi|291426194|gb|EFE99226.1| alaS [Escherichia coli FVEC1412]
gi|298277066|gb|EFI18582.1| alanyl-tRNA synthetase [Escherichia coli FVEC1302]
gi|331058179|gb|EGI30160.1| alanine--tRNA ligase [Escherichia coli TA143]
gi|345334038|gb|EGW66483.1| alanyl-tRNA synthetase [Escherichia coli STEC_C165-02]
gi|388407875|gb|EIL68236.1| alanyl-tRNA synthetase [Escherichia coli 576-1]
gi|430873510|gb|ELB97076.1| alanyl-tRNA synthetase [Escherichia coli KTE2]
gi|430924542|gb|ELC45254.1| alanyl-tRNA synthetase [Escherichia coli KTE26]
gi|430954257|gb|ELC73136.1| alanyl-tRNA synthetase [Escherichia coli KTE181]
gi|430987956|gb|ELD04469.1| alanyl-tRNA synthetase [Escherichia coli KTE204]
gi|431004060|gb|ELD19292.1| alanyl-tRNA synthetase [Escherichia coli KTE208]
gi|431019199|gb|ELD32606.1| alanyl-tRNA synthetase [Escherichia coli KTE213]
gi|431049812|gb|ELD59690.1| alanyl-tRNA synthetase [Escherichia coli KTE228]
gi|431068327|gb|ELD76808.1| alanyl-tRNA synthetase [Escherichia coli KTE235]
gi|431169012|gb|ELE69243.1| alanyl-tRNA synthetase [Escherichia coli KTE80]
gi|431180114|gb|ELE80002.1| alanyl-tRNA synthetase [Escherichia coli KTE83]
gi|431199565|gb|ELE98313.1| alanyl-tRNA synthetase [Escherichia coli KTE116]
gi|431313615|gb|ELG01585.1| alanyl-tRNA synthetase [Escherichia coli KTE50]
gi|431316994|gb|ELG04780.1| alanyl-tRNA synthetase [Escherichia coli KTE54]
gi|431387825|gb|ELG71637.1| alanyl-tRNA synthetase [Escherichia coli KTE140]
gi|431415263|gb|ELG97808.1| alanyl-tRNA synthetase [Escherichia coli KTE158]
gi|431437896|gb|ELH19402.1| alanyl-tRNA synthetase [Escherichia coli KTE190]
gi|431471608|gb|ELH51500.1| alanyl-tRNA synthetase [Escherichia coli KTE202]
gi|431529378|gb|ELI06079.1| alanyl-tRNA synthetase [Escherichia coli KTE105]
gi|431569127|gb|ELI42088.1| alanyl-tRNA synthetase [Escherichia coli KTE122]
gi|431579987|gb|ELI52557.1| alanyl-tRNA synthetase [Escherichia coli KTE125]
gi|431581869|gb|ELI54310.1| alanyl-tRNA synthetase [Escherichia coli KTE128]
gi|431676099|gb|ELJ42222.1| alanyl-tRNA synthetase [Escherichia coli KTE177]
gi|431699632|gb|ELJ64630.1| alanyl-tRNA synthetase [Escherichia coli KTE82]
gi|431719100|gb|ELJ83161.1| alanyl-tRNA synthetase [Escherichia coli KTE95]
Length = 876
Score = 579 bits (1493), Expect = e-162, Method: Compositional matrix adjust.
Identities = 317/689 (46%), Positives = 438/689 (63%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +I+ +++ + D +N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRTLIQAVAKVTGAT-----DLSNKSLRVIADHIRSCAFLIADGVMP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K F + I++ D+K ++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAKE--------TFFYKLVGPLIDVMGSAGEDLKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGFGADYNAM-IRVDSA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD L V +L V+GK V ++ G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+GTN AV + + +++G H G + G L+VG V+A VD R R +++H+ATH
Sbjct: 513 KGTNFSFAVEDTQKYGQAIG----HIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G SQ GSLV LRFDF+ + + E+ +E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M L+ AK GA+A+FGEKY E+V++ S
Sbjct: 629 NIMDLEAAKAKGAMALFGEKYDERVRVLS 657
>gi|345857916|ref|ZP_08810334.1| alanyl-tRNA synthetase [Desulfosporosinus sp. OT]
gi|344329003|gb|EGW40363.1| alanyl-tRNA synthetase [Desulfosporosinus sp. OT]
Length = 877
Score = 579 bits (1493), Expect = e-162, Method: Compositional matrix adjust.
Identities = 305/676 (45%), Positives = 433/676 (64%), Gaps = 31/676 (4%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
+G+ +R FL ++ ++GHK+LPSASL+P +DPT+LLT+AGM+ FKP F +V PRA
Sbjct: 3 TGNELRDMFLKYFEAKGHKILPSASLIPKDDPTLLLTVAGMVPFKPYFQRRVEPPFPRAT 62
Query: 108 TSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
T+Q+C+RT D+E VG+T+RHHT+FEMLGNFSFGDYFK EAI WAWE+ T +P +LW
Sbjct: 63 TAQKCVRTPDLEEVGKTARHHTYFEMLGNFSFGDYFKNEAIPWAWEYITEVLKIPVEKLW 122
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCS 227
+++Y +D+EA IW ++ GV E I +G +NFW +G TGPCGPCSEIY D RGC
Sbjct: 123 VTIYPEDEEAKRIWVEQAGVKAERI--IGDPENFWAAGPTGPCGPCSEIYVDLGEARGCG 180
Query: 228 DVDLG----DDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNN 283
D G D R++E +NLVFMQ+N+ + G L PL ++NIDTG+GLERIA ++Q V N
Sbjct: 181 KPDCGAGSCDCDRYLEIWNLVFMQFNRDEAGVLTPLPKQNIDTGMGLERIASVMQGVETN 240
Query: 284 YETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYV 343
++TDL PII +EL + Y + N +++L LK++ DH+R++ ++L+DG+ P+N GRGYV
Sbjct: 241 FDTDLFRPIIDYVAELGGIKY-KDNPKSDLALKVVADHVRSVSFMLADGIRPNNEGRGYV 299
Query: 344 VRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELK 403
+RR++RRA+R +LLGI E +FL S+ +H ++K E IL L
Sbjct: 300 LRRILRRAIRYAKLLGI--------EKSFLESVFRIIQRDYSHAYPELKENENFILNHLN 351
Query: 404 REELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVA 463
EE F TLE+G +LL + + + + + L+GQDAF LY+T+GFP E+T+E+
Sbjct: 352 LEEKNFQATLEQGTQLLQEKIKEIVKQGETV-----LTGQDAFYLYETYGFPAELTEEIL 406
Query: 464 EEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEK---IPDTEFLGYDTLSA 520
EEHG+S+DM+ + E R Q++ ++ +V +S +L EK + T F+GY+ +SA
Sbjct: 407 EEHGLSIDMESYKTAAEEHRLQAKEQSQQMR-AVAESPELIEKAKQLGATPFVGYEQVSA 465
Query: 521 KAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVE 580
+ L V+G + G +V V L TPFYAESGGQ+ D G L + A
Sbjct: 466 VTRIAGLFVDGTEMQDAGAGEEVMVFLAETPFYAESGGQVSDSGVLKTPR------AEAR 519
Query: 581 VKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIG 640
V +VKK + H+ + GVL VG VEA VD Q HH+ATHLLQAAL+ V+G
Sbjct: 520 VLEVKKGVTGTIYHRVKVTTGVLHVGETVEAEVDNFSHQATTRHHSATHLLQAALRSVLG 579
Query: 641 QETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRA 700
+ QAGSLV +RLRFDF PL L+ +E LIN + ++ M+L++AK +
Sbjct: 580 EHVQQAGSLVTPERLRFDFTHFSPLTPDGLKAVEGLINEAVLKNMPVEATEMSLNEAKNS 639
Query: 701 GAIAMFGEKYGEQVKI 716
GA A+FGEKYGE V++
Sbjct: 640 GATALFGEKYGETVRV 655
>gi|422331684|ref|ZP_16412699.1| alanyl-tRNA synthetase [Escherichia coli 4_1_47FAA]
gi|373247277|gb|EHP66723.1| alanyl-tRNA synthetase [Escherichia coli 4_1_47FAA]
Length = 876
Score = 579 bits (1493), Expect = e-162, Method: Compositional matrix adjust.
Identities = 317/689 (46%), Positives = 438/689 (63%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKGR 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +I+ +++ + D +N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRTLIQAVAKVTGAT-----DLSNKSLRVIADHIRSCAFLIADGVMP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K F + I++ D+K ++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAKE--------TFFYKLVGPLIDVMGSAGEDLKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGFGADYNAM-IRVDSA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD L V +L V+GK V ++ G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+GTN AV + + +++G H G + G L+VG V+A VD R R +++H+ATH
Sbjct: 513 KGTNFSFAVEDTQKYGQAIG----HIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G SQ GSLV LRFDF+ + + E+ +E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M L+ AK GA+A+FGEKY E+V++ S
Sbjct: 629 NIMDLEAAKAKGAMALFGEKYDERVRVLS 657
>gi|152977739|ref|YP_001343368.1| alanyl-tRNA synthetase [Actinobacillus succinogenes 130Z]
gi|205829971|sp|A6VKD6.1|SYA_ACTSZ RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|150839462|gb|ABR73433.1| alanyl-tRNA synthetase [Actinobacillus succinogenes 130Z]
Length = 874
Score = 579 bits (1493), Expect = e-162, Method: Compositional matrix adjust.
Identities = 321/681 (47%), Positives = 431/681 (63%), Gaps = 50/681 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVPE DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 7 IRQSFLDFFHSKGHQVVESSSLVPENDPTLLFTNAGMNQFKDVFLGMDKRPYSRATTAQR 66
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEM+GNFSFGDYFK +AI +AWEF T LP +
Sbjct: 67 CVRAGGKHNDLENVGYTARHHTFFEMMGNFSFGDYFKYDAINFAWEFLTSPKWLALPKEK 126
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
L+++VYE DDEA++IWNKEVGVP EHI R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 127 LYVTVYETDDEAYDIWNKEVGVPQEHIIRIGDNKGAPYASDNFWAMGDTGPCGPCTEIFY 186
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N+ DG++E L + ++DTG+GLER+
Sbjct: 187 D-HGDHIWGGLPGTPEEDGDRYIEIWNIVFMQFNRLADGTMEKLPKPSVDTGMGLERMTA 245
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NYE D+ +IKK +E+ + D N +L++I DH+R+ YL++DGV P
Sbjct: 246 VLQHVNSNYEIDIFQTLIKKVAEIVG-----TTDLGNKSLRVIADHIRSCAYLIADGVIP 300
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN GRGYV+RR+IRRAVR G LLG K F + IE+ VK ++
Sbjct: 301 SNEGRGYVLRRIIRRAVRHGHLLGAKE--------TFFYKLVPTLIEVMAEAGKQVKEKQ 352
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
+ + L+ EE +F +TLERG LLD LA+ + LSG+ AF LYDT+GFP
Sbjct: 353 ANVEKLLRLEEEQFARTLERGLILLDAELANVKNGV--------LSGEVAFKLYDTYGFP 404
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGY 515
+++T +V E ++VD GFD EME QR ++Q+A N D + +T+F GY
Sbjct: 405 LDLTADVCRERNIAVDENGFDKEMEAQRLRAQSASNFGM----DYTSIIRVDGETKFEGY 460
Query: 516 DTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
+ + A V +L +GK V VS G V+L TPFYAE GGQIGD G L G +
Sbjct: 461 TNVESLAKVTALFRDGKAVESVSAGQSAVVILENTPFYAEMGGQIGDSGML-TANGLH-- 517
Query: 576 TAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAAL 635
+VKD +K G VF H G + +G L VG+ V A VD + RQ K++H+ATHLL AAL
Sbjct: 518 ---FDVKDTQK-YGQVFGHIGELTQGTLSVGQIVNAQVDAQRRQYTKLNHSATHLLHAAL 573
Query: 636 KKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALD 695
++V+G+ +Q GSLV+ LRFDF + ++ EIERL+N I + + T+ M +
Sbjct: 574 RQVLGEHVAQKGSLVSDVGLRFDFVQPEAVTKEQIMEIERLVNFHIRANHPVLTEEMGVA 633
Query: 696 DAKRAGAIAMFGEKYGEQVKI 716
+AK GAIA+FGEKYGE V++
Sbjct: 634 EAKSKGAIALFGEKYGETVRV 654
>gi|417282120|ref|ZP_12069420.1| alanine--tRNA ligase [Escherichia coli 3003]
gi|417284969|ref|ZP_12072260.1| alanine--tRNA ligase [Escherichia coli TW07793]
gi|419701495|ref|ZP_14229094.1| alanyl-tRNA synthetase [Escherichia coli SCI-07]
gi|419915901|ref|ZP_14434233.1| alanyl-tRNA synthetase [Escherichia coli KD1]
gi|422970163|ref|ZP_16973956.1| alanyl-tRNA synthetase [Escherichia coli TA124]
gi|371600541|gb|EHN89313.1| alanyl-tRNA synthetase [Escherichia coli TA124]
gi|380346957|gb|EIA35246.1| alanyl-tRNA synthetase [Escherichia coli SCI-07]
gi|386246449|gb|EII88179.1| alanine--tRNA ligase [Escherichia coli 3003]
gi|386250210|gb|EII96377.1| alanine--tRNA ligase [Escherichia coli TW07793]
gi|388382634|gb|EIL44484.1| alanyl-tRNA synthetase [Escherichia coli KD1]
Length = 876
Score = 579 bits (1493), Expect = e-162, Method: Compositional matrix adjust.
Identities = 317/689 (46%), Positives = 437/689 (63%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +I+ +++ + D +N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRTLIQAVAKVTGAT-----DLSNKSLRVIADHIRSCAFLIADGVMP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K F + I++ D+K ++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAKE--------TFFYKLVGPLIDVMGSAGEDLKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GFD ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFDAAMEEQRRRAREASGFGADYNAM-IRVDSA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD L V +L V+GK V ++ G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDHLELNGKVTALFVDGKSVDAINAGQEAVVVLDQTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G N AV + + +++G H G + G L+VG V+A VD R R +++H+ATH
Sbjct: 513 KGANFSFAVEDTQKYGQAIG----HIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G SQ GSLV LRFDF+ + + E+ +E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M L+ AK GA+A+FGEKY E+V++ S
Sbjct: 629 NIMDLEAAKAKGAMALFGEKYDERVRVLS 657
>gi|340000386|ref|YP_004731270.1| alanyl-tRNA synthetase [Salmonella bongori NCTC 12419]
gi|339513748|emb|CCC31505.1| alanyl-tRNA synthetase [Salmonella bongori NCTC 12419]
Length = 876
Score = 579 bits (1493), Expect = e-162, Method: Compositional matrix adjust.
Identities = 318/689 (46%), Positives = 440/689 (63%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWFALPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NYE DL +I+ +++ S D +N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYEIDLFRTLIEAVAKVTGAS-----DLSNKSLRVIADHIRSCAFLVADGVLP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K F + IE+ ++K ++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAKE--------TFFYKLVGPLIEVMGSAGEELKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLQGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QR +++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRCRAREASGFGADYNAM-IRVDSA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD L V +L V+GK V ++S G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDHLELNGKVTALFVDGKAVEEISAGQEAVVVLDQTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+GT AV + + +++G H G + G L+VG V+A VD R R +++H+ATH
Sbjct: 513 KGTGFTFAVNDTQKYGQAIG----HLGKLAAGALKVGDAVQADVDEARRARIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G +Q GSLV+ LRFDF+ + + +E+ E+E L+N I ++T
Sbjct: 569 LMHAALRQVLGAHVAQKGSLVSDKVLRFDFSHNEAMKPSEIREVEDLVNAQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M L+ AK GA+A+FGEKY E+V++ S
Sbjct: 629 HIMDLEAAKAKGAMALFGEKYDERVRVLS 657
>gi|332284668|ref|YP_004416579.1| alanyl-tRNA synthetase [Pusillimonas sp. T7-7]
gi|330428621|gb|AEC19955.1| alanyl-tRNA synthetase [Pusillimonas sp. T7-7]
Length = 873
Score = 579 bits (1492), Expect = e-162, Method: Compositional matrix adjust.
Identities = 309/681 (45%), Positives = 422/681 (61%), Gaps = 51/681 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR++FL F+ S+GH+V+PS+SLVP DPT+L T +GM+QFK +F GK R RA +SQR
Sbjct: 6 IRQKFLSFFESKGHQVVPSSSLVPGNDPTLLFTNSGMVQFKDVFTGKETRPYSRATSSQR 65
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AIQ AWE T + LPA +LW
Sbjct: 66 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAIQNAWELLTTVYQLPAEKLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYYDF 220
++VY++DDEA++IW KE+GVP E I R+G A DNFW TGPCGPCSEI+YD
Sbjct: 126 VTVYQEDDEAYDIWAKEIGVPAERIVRIGDNKGARYASDNFWQMADTGPCGPCSEIFYDH 185
Query: 221 HPDRGCSDVDLG--DDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQ 278
P D R+IE +NLVFMQ+ + G++ L + +DTG+GLERIA +LQ
Sbjct: 186 GPGVWGGPPGSPEEDGDRYIEIWNLVFMQFERDAAGNMPLLPKPCVDTGMGLERIAAVLQ 245
Query: 279 KVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNI 338
V +NYE DL +IK A+ +S D N +LK+I DH+RA +L+ DGV PSN
Sbjct: 246 HVHSNYEIDLFQSLIKAAARETGIS-----DLANNSLKVIADHIRACSFLIVDGVIPSNE 300
Query: 339 GRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRI 398
GRGYV+RR++RRA+R G LG G F + + + ++ A++ RI
Sbjct: 301 GRGYVLRRIVRRALRHGHKLG--------QSGVFFHRLVKDLVAEMGQAYPELVAQQARI 352
Query: 399 LEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPR---LSGQDAFLLYDTFGFP 455
+ LK+EE RF +TLE G K+LD LA +VP L GQ F LYDT+GFP
Sbjct: 353 EQVLKQEEERFSETLENGMKILDAALA----------AVPEKGMLDGQTLFTLYDTYGFP 402
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGY 515
V++T ++ E V VDM GF++ M +QR Q++AA + L+ +T F GY
Sbjct: 403 VDLTADICREREVQVDMDGFEVAMNHQREQARAAGK-----FKAAEGLSYSGVETRFDGY 457
Query: 516 DTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
D L ++ V +L ++G V VS G V+L+ TPFYAESGGQ+GD G L
Sbjct: 458 DQLQSQGTVTALYIDGTQVESVSAGQQAIVVLDATPFYAESGGQVGDAGIL------QAN 511
Query: 576 TAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAAL 635
A V D +K SVF H G + EGVL VG V+A VD R R +H+ATHL+ AL
Sbjct: 512 GARFAVADTQKIQNSVFGHHGEMLEGVLAVGDTVDAQVDKARRARTVRNHSATHLMHKAL 571
Query: 636 KKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALD 695
++V+G Q GSLV D+ RFDF P+ ++ ++ER++N + + + Q ++M+ D
Sbjct: 572 RQVLGSHVQQRGSLVDPDKTRFDFAHDAPMTADQIAQVERIVNAEVLNNHATQAQLMSYD 631
Query: 696 DAKRAGAIAMFGEKYGEQVKI 716
DA + GA+A+FGEKYG+ V++
Sbjct: 632 DAVQGGAMALFGEKYGDTVRV 652
>gi|91212055|ref|YP_542041.1| alanyl-tRNA synthetase [Escherichia coli UTI89]
gi|117624928|ref|YP_853916.1| alanyl-tRNA synthetase [Escherichia coli APEC O1]
gi|218559685|ref|YP_002392598.1| alanyl-tRNA synthetase [Escherichia coli S88]
gi|237706683|ref|ZP_04537164.1| alanyl-tRNA synthetase [Escherichia sp. 3_2_53FAA]
gi|386600686|ref|YP_006102192.1| penicillin-binding protein 7 [Escherichia coli IHE3034]
gi|386603251|ref|YP_006109551.1| alanyl-tRNA synthetase [Escherichia coli UM146]
gi|417086132|ref|ZP_11953368.1| alanyl-tRNA synthetase [Escherichia coli cloneA_i1]
gi|419944729|ref|ZP_14461203.1| alanyl-tRNA synthetase [Escherichia coli HM605]
gi|422750285|ref|ZP_16804196.1| alanyl-tRNA synthetase [Escherichia coli H252]
gi|422754539|ref|ZP_16808365.1| alanyl-tRNA synthetase [Escherichia coli H263]
gi|422840683|ref|ZP_16888653.1| alanyl-tRNA synthetase [Escherichia coli H397]
gi|432358997|ref|ZP_19602215.1| alanyl-tRNA synthetase [Escherichia coli KTE4]
gi|432363861|ref|ZP_19607019.1| alanyl-tRNA synthetase [Escherichia coli KTE5]
gi|432574812|ref|ZP_19811289.1| alanyl-tRNA synthetase [Escherichia coli KTE55]
gi|432588996|ref|ZP_19825350.1| alanyl-tRNA synthetase [Escherichia coli KTE58]
gi|432755548|ref|ZP_19990094.1| alanyl-tRNA synthetase [Escherichia coli KTE22]
gi|432779628|ref|ZP_20013850.1| alanyl-tRNA synthetase [Escherichia coli KTE59]
gi|432788620|ref|ZP_20022748.1| alanyl-tRNA synthetase [Escherichia coli KTE65]
gi|432822056|ref|ZP_20055746.1| alanyl-tRNA synthetase [Escherichia coli KTE118]
gi|432823566|ref|ZP_20057236.1| alanyl-tRNA synthetase [Escherichia coli KTE123]
gi|433006148|ref|ZP_20194574.1| alanyl-tRNA synthetase [Escherichia coli KTE227]
gi|433008816|ref|ZP_20197230.1| alanyl-tRNA synthetase [Escherichia coli KTE229]
gi|433154766|ref|ZP_20339702.1| alanyl-tRNA synthetase [Escherichia coli KTE176]
gi|433164651|ref|ZP_20349384.1| alanyl-tRNA synthetase [Escherichia coli KTE179]
gi|122422735|sp|Q1R804.1|SYA_ECOUT RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|205830084|sp|A1AEN7.1|SYA_ECOK1 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|91073629|gb|ABE08510.1| alanyl-tRNA synthetase [Escherichia coli UTI89]
gi|115514052|gb|ABJ02127.1| alanyl-tRNA synthetase [Escherichia coli APEC O1]
gi|218366454|emb|CAR04206.1| alanyl-tRNA synthetase [Escherichia coli S88]
gi|226899723|gb|EEH85982.1| alanyl-tRNA synthetase [Escherichia sp. 3_2_53FAA]
gi|294489971|gb|ADE88727.1| penicillin-binding protein 7 [Escherichia coli IHE3034]
gi|307625735|gb|ADN70039.1| alanyl-tRNA synthetase [Escherichia coli UM146]
gi|323951085|gb|EGB46961.1| alanyl-tRNA synthetase [Escherichia coli H252]
gi|323957093|gb|EGB52818.1| alanyl-tRNA synthetase [Escherichia coli H263]
gi|355350657|gb|EHF99853.1| alanyl-tRNA synthetase [Escherichia coli cloneA_i1]
gi|371605694|gb|EHN94302.1| alanyl-tRNA synthetase [Escherichia coli H397]
gi|388417871|gb|EIL77698.1| alanyl-tRNA synthetase [Escherichia coli HM605]
gi|430875518|gb|ELB99053.1| alanyl-tRNA synthetase [Escherichia coli KTE4]
gi|430884317|gb|ELC07257.1| alanyl-tRNA synthetase [Escherichia coli KTE5]
gi|431106648|gb|ELE10847.1| alanyl-tRNA synthetase [Escherichia coli KTE55]
gi|431119019|gb|ELE22034.1| alanyl-tRNA synthetase [Escherichia coli KTE58]
gi|431300852|gb|ELF90399.1| alanyl-tRNA synthetase [Escherichia coli KTE22]
gi|431325543|gb|ELG12926.1| alanyl-tRNA synthetase [Escherichia coli KTE59]
gi|431335620|gb|ELG22749.1| alanyl-tRNA synthetase [Escherichia coli KTE65]
gi|431367125|gb|ELG53611.1| alanyl-tRNA synthetase [Escherichia coli KTE118]
gi|431378091|gb|ELG63082.1| alanyl-tRNA synthetase [Escherichia coli KTE123]
gi|431512516|gb|ELH90607.1| alanyl-tRNA synthetase [Escherichia coli KTE227]
gi|431522555|gb|ELH99787.1| alanyl-tRNA synthetase [Escherichia coli KTE229]
gi|431672792|gb|ELJ39026.1| alanyl-tRNA synthetase [Escherichia coli KTE176]
gi|431685482|gb|ELJ51052.1| alanyl-tRNA synthetase [Escherichia coli KTE179]
Length = 876
Score = 579 bits (1492), Expect = e-162, Method: Compositional matrix adjust.
Identities = 317/689 (46%), Positives = 437/689 (63%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +I+ +++ + D +N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRTLIQAVAKVTGAT-----DLSNKSLRVIADHIRSCAFLIADGVMP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K F + I++ D+K ++
Sbjct: 302 SNESRGYVLRRIIRRAVRHGNMLGAKE--------TFFYKLVGPLIDVMGSAGEDLKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GFD ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFDAAMEEQRRRAREASGFGADYNAM-IRVDSA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD L V +L V+GK V ++ G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G N AV + + +++G H G + G L+VG V+A VD R R +++H+ATH
Sbjct: 513 KGANFSFAVEDTQKYGQAIG----HIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G SQ GSLV LRFDF+ + + E+ +E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M L+ AK GA+A+FGEKY E+V++ S
Sbjct: 629 NIMDLEAAKAKGAMALFGEKYDERVRVLS 657
>gi|417851292|ref|ZP_12497053.1| alanyl-tRNA synthetase [Pasteurella multocida subsp. gallicida str.
Anand1_poultry]
gi|338219770|gb|EGP05385.1| alanyl-tRNA synthetase [Pasteurella multocida subsp. gallicida str.
Anand1_poultry]
Length = 874
Score = 579 bits (1492), Expect = e-162, Method: Compositional matrix adjust.
Identities = 321/680 (47%), Positives = 434/680 (63%), Gaps = 48/680 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ ++GH+++ S++LVPE DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 7 IRQSFLDFFHTKGHQIVASSALVPENDPTLLFTNAGMNQFKDVFLGMDKRPYSRATTAQR 66
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFKK+AI + WE+ T GLPA +
Sbjct: 67 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKKDAIHFGWEYLTSPRWLGLPAEK 126
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA++IWNKEVGVP E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 127 LWVTVYETDDEAYDIWNKEVGVPAERIIRIGDNKGAPYASDNFWAMGDTGPCGPCTEIFY 186
Query: 219 DF--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARI 276
D H G D R+IE +N+VFMQ+N+ DG++EPL + ++DTG+GLERI+ +
Sbjct: 187 DHGEHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRHADGTMEPLPKPSVDTGMGLERISAV 246
Query: 277 LQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPS 336
LQ V +NYE D+ +I K +EL D +N +L++I DH+R+ YL++DGV PS
Sbjct: 247 LQHVNSNYEIDIFQKLIAKVAELTG-----EKDLSNKSLRVIADHIRSCAYLIADGVIPS 301
Query: 337 NIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQ 396
N GRGYV+RR+IRRA+R G LLG K AF + I++ VK ++
Sbjct: 302 NEGRGYVLRRIIRRALRHGNLLGAKE--------AFFYKLVPTLIDVMAEAGIGVKEKQA 353
Query: 397 RILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPV 456
+ + L+ EE +F +TLERG LLD+ LA+ + LSG+ AF LYDT+GFP+
Sbjct: 354 TVEKLLRLEEEQFARTLERGLALLDEALANVKN--------GELSGEVAFKLYDTYGFPL 405
Query: 457 EITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYD 516
++T +V E +++D GFD EME QR ++Q+A D ++ T F GY
Sbjct: 406 DLTADVCRERNITIDEVGFDREMEAQRLRAQSASQFGM----DYNNVIRVEGCTTFEGYT 461
Query: 517 TLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQT 576
+ A V +L +GKPV ++ G V+L TPFYAESGGQIGD G+L N Q
Sbjct: 462 ASESLAKVTALFADGKPVERIEAGQSAVVILENTPFYAESGGQIGDSGYL------NGQG 515
Query: 577 AVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALK 636
EVKD +K G VF H G + G L VG+ V A+VD K R ++H+ATHLL AAL+
Sbjct: 516 FSFEVKDTQK-YGQVFGHIGELVSGSLTVGKSVNAVVDVKRRHNTSLNHSATHLLHAALR 574
Query: 637 KVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDD 696
+V+G+ Q GSLV+ LRFDF H + +L EIE L+N I +L+QT++M L+
Sbjct: 575 QVLGEHVVQKGSLVSDVALRFDFAHHEAITKAQLVEIECLVNQQIRANHLIQTELMELEA 634
Query: 697 AKRAGAIAMFGEKYGEQVKI 716
AK GA+A+FGEKY +QV++
Sbjct: 635 AKAKGAMALFGEKYADQVRV 654
>gi|384135853|ref|YP_005518567.1| alanyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
acidocaldarius Tc-4-1]
gi|339289938|gb|AEJ44048.1| alanyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
acidocaldarius Tc-4-1]
Length = 879
Score = 579 bits (1492), Expect = e-162, Method: Compositional matrix adjust.
Identities = 317/674 (47%), Positives = 427/674 (63%), Gaps = 30/674 (4%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
+G IR+ F F+A RGH VLPS LVP +DPT+L AGM KP F G+ +VPR
Sbjct: 5 TGQEIRRAFKQFFAERGHMVLPSFPLVPKDDPTLLWINAGMAPLKPYFDGREIPEVPRIV 64
Query: 108 TSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
+Q+CIRTND+E VG T+RH TFFEMLGNFSFGDYFK EAI WAWEF T L +R+
Sbjct: 65 DAQKCIRTNDIEEVGHTARHQTFFEMLGNFSFGDYFKLEAITWAWEFLTQVLELDPDRIS 124
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCS 227
++++E+DDEAFE+W+ VG+P I R G +DNFW G GPCGPCSEI+YD GC
Sbjct: 125 VTIHEEDDEAFEVWHHRVGLPASRIYR-GKEDNFWEIG-EGPCGPCSEIFYDRGEAYGCG 182
Query: 228 DVDL---GDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNY 284
D D RF+E +NLVF Q+NK DGS PL +KNIDTG GLER+A ILQ VPNN+
Sbjct: 183 SPDCKPGCDCDRFLEIWNLVFTQFNKNADGSYSPLPKKNIDTGSGLERLASILQDVPNNF 242
Query: 285 ETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVV 344
ETDL PII +A+EL+ Y QS + +++LKII DH+R + + + DGV PSN GRGYV+
Sbjct: 243 ETDLFRPIIDRAAELSGRPYGQSAE-DDVHLKIIADHVRTVTFAIGDGVLPSNEGRGYVI 301
Query: 345 RRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEE--L 402
RRL+RRAVR+GR LG+ E FL + A+ D + RE+R L E +
Sbjct: 302 RRLLRRAVRSGRKLGV--------ERPFLYELV--AVVDRIMGDDYPEVREKRPLIERVV 351
Query: 403 KREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEV 462
+ EE RF+QTL GE+LL++ + + +R LSG+ AF LYDT+GFP+++T E+
Sbjct: 352 RTEEERFLQTLAAGEELLNRTIEEVKARGETV-----LSGEAAFRLYDTYGFPIDLTVEI 406
Query: 463 AEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTLSAKA 522
A E G++VD +GF+ E+E QR +++ A + L + F+GYD L+ A
Sbjct: 407 AREKGIAVDREGFERELEEQRARAREARQVAEGMQSQRGALETFTEPSRFVGYDELTVDA 466
Query: 523 IVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVK 582
+ + +G V ++ G + +V+L+ TPFYAESGGQ+GD G + T G EV
Sbjct: 467 TILGIFKDGDRVDGLAIGEEGQVILDVTPFYAESGGQVGDRGEIVGTNGK------AEVL 520
Query: 583 DVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQE 642
DV+K+ V + + +G L G V A VD R+ +HTATHLL AL+ V+G
Sbjct: 521 DVQKAPHGQHVMRVRVVDGSLLQGDSVRAHVDEDFRRDIVKNHTATHLLHKALRDVLGTH 580
Query: 643 TSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGA 702
+QAGSLV +RLRFDF+ PL D EL E+ER +N I + + + M LD+AK GA
Sbjct: 581 VAQAGSLVEPERLRFDFSHFGPLTDEELAEVERRVNDEIWRDHTVHIREMDLDEAKAMGA 640
Query: 703 IAMFGEKYGEQVKI 716
+A+FGEKYG++V++
Sbjct: 641 MALFGEKYGQRVRV 654
>gi|218547790|ref|YP_002381581.1| alanyl-tRNA synthetase [Escherichia fergusonii ATCC 35469]
gi|218355331|emb|CAQ87938.1| alanyl-tRNA synthetase [Escherichia fergusonii ATCC 35469]
Length = 876
Score = 578 bits (1491), Expect = e-162, Method: Compositional matrix adjust.
Identities = 317/689 (46%), Positives = 437/689 (63%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +I+ +++ + D +N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRTLIQAVAKVTGAT-----DLSNKSLRVIADHIRSCAFLIADGVMP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K F + I++ D+K ++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAKE--------TFFYKLVGPLIDVMGSAGEDLKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGFGADYNAM-IRVDSA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD L V +L V+GK V ++ G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G N AV + + +++G H G + G L+VG V+A VD R R +++H+ATH
Sbjct: 513 KGANFSFAVEDTQKYGQAIG----HIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL+KV+G SQ GSLV LRFDF+ + + E+ +E L+N I ++T
Sbjct: 569 LMHAALRKVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M L+ AK GA+A+FGEKY E+V++ S
Sbjct: 629 NIMDLEAAKAKGAMALFGEKYDERVRVLS 657
>gi|432598844|ref|ZP_19835115.1| alanyl-tRNA synthetase [Escherichia coli KTE62]
gi|431128714|gb|ELE30890.1| alanyl-tRNA synthetase [Escherichia coli KTE62]
Length = 876
Score = 578 bits (1491), Expect = e-162, Method: Compositional matrix adjust.
Identities = 317/689 (46%), Positives = 436/689 (63%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +I+ +++ + D +N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRTLIQAVAKVTGAT-----DLSNKSLRVIADHIRSCAFLIADGVMP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K F + I++ D+K ++
Sbjct: 302 SNESRGYVLRRIIRRAVRHGNMLGAKE--------TFFYKLVGPLIDVMGSAGEDLKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GFD ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFDAAMEEQRRRAREASGFGADYNAM-IRVDSA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD L V +L V+GK V ++ G + V+L +TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLEQTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G N AV + + +++G H G + G L+VG V+A VD R R +++H+ATH
Sbjct: 513 KGANFSFAVEDTQKYGQAIG----HIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G SQ GSLV LRFDF+ + + E+ +E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M L+ AK GA+A+FGEKY E+V++ S
Sbjct: 629 NIMDLEAAKAKGAMALFGEKYDERVRVLS 657
>gi|218701187|ref|YP_002408816.1| alanyl-tRNA synthetase [Escherichia coli IAI39]
gi|386625414|ref|YP_006145142.1| alanyl-tRNA synthetase [Escherichia coli O7:K1 str. CE10]
gi|218371173|emb|CAR19004.1| alanyl-tRNA synthetase [Escherichia coli IAI39]
gi|349739151|gb|AEQ13857.1| alanyl-tRNA synthetase [Escherichia coli O7:K1 str. CE10]
Length = 876
Score = 578 bits (1491), Expect = e-162, Method: Compositional matrix adjust.
Identities = 316/689 (45%), Positives = 437/689 (63%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +I+ +++ + D +N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRTLIQAVAKVTGAT-----DLSNKSLRVIADHIRSCAFLIADGVMP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K F + I++ D+K ++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAKE--------TFFYKLVGPLIDVMGSAGEDLKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGFGADYNAM-IRVDSA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD L V +L V+GK V ++ G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G N AV + + +++G H G + G L+VG V+A VD R R +++H+ATH
Sbjct: 513 KGANFSFAVEDTQKYGQAIG----HIGKLATGSLKVGDAVQADVDEARRARIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G SQ GSLV LRFDF+ + + E+ +E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKSEEIRAVEDLVNAQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M L+ AK GA+A+FGEKY E+V++ S
Sbjct: 629 NIMDLEAAKAKGAMALFGEKYDERVRVLS 657
>gi|331648414|ref|ZP_08349502.1| alanine--tRNA ligase [Escherichia coli M605]
gi|386620257|ref|YP_006139837.1| alanyl-tRNA synthetase [Escherichia coli NA114]
gi|387830543|ref|YP_003350480.1| alanyl-tRNA synthetase [Escherichia coli SE15]
gi|432422997|ref|ZP_19665539.1| alanyl-tRNA synthetase [Escherichia coli KTE178]
gi|432501136|ref|ZP_19742891.1| alanyl-tRNA synthetase [Escherichia coli KTE216]
gi|432559859|ref|ZP_19796526.1| alanyl-tRNA synthetase [Escherichia coli KTE49]
gi|432695463|ref|ZP_19930659.1| alanyl-tRNA synthetase [Escherichia coli KTE162]
gi|432706925|ref|ZP_19942005.1| alanyl-tRNA synthetase [Escherichia coli KTE6]
gi|432920690|ref|ZP_20124279.1| alanyl-tRNA synthetase [Escherichia coli KTE173]
gi|432928374|ref|ZP_20129494.1| alanyl-tRNA synthetase [Escherichia coli KTE175]
gi|432982023|ref|ZP_20170796.1| alanyl-tRNA synthetase [Escherichia coli KTE211]
gi|433097465|ref|ZP_20283646.1| alanyl-tRNA synthetase [Escherichia coli KTE139]
gi|433106909|ref|ZP_20292879.1| alanyl-tRNA synthetase [Escherichia coli KTE148]
gi|281179700|dbj|BAI56030.1| alanyl-tRNA synthetase [Escherichia coli SE15]
gi|331042161|gb|EGI14303.1| alanine--tRNA ligase [Escherichia coli M605]
gi|333970758|gb|AEG37563.1| Alanyl-tRNA synthetase [Escherichia coli NA114]
gi|430943270|gb|ELC63388.1| alanyl-tRNA synthetase [Escherichia coli KTE178]
gi|431027521|gb|ELD40583.1| alanyl-tRNA synthetase [Escherichia coli KTE216]
gi|431090060|gb|ELD95833.1| alanyl-tRNA synthetase [Escherichia coli KTE49]
gi|431232892|gb|ELF28494.1| alanyl-tRNA synthetase [Escherichia coli KTE162]
gi|431256870|gb|ELF49804.1| alanyl-tRNA synthetase [Escherichia coli KTE6]
gi|431439978|gb|ELH21308.1| alanyl-tRNA synthetase [Escherichia coli KTE173]
gi|431442361|gb|ELH23450.1| alanyl-tRNA synthetase [Escherichia coli KTE175]
gi|431490147|gb|ELH69764.1| alanyl-tRNA synthetase [Escherichia coli KTE211]
gi|431614442|gb|ELI83595.1| alanyl-tRNA synthetase [Escherichia coli KTE139]
gi|431625822|gb|ELI94379.1| alanyl-tRNA synthetase [Escherichia coli KTE148]
Length = 876
Score = 578 bits (1490), Expect = e-162, Method: Compositional matrix adjust.
Identities = 317/689 (46%), Positives = 437/689 (63%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +I+ +++ + D +N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRTLIQAVAKVTGAT-----DLSNKSLRVIADHIRSCAFLIADGVMP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K F + I++ D+K ++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAKE--------TFFYKLVGPLIDVMGSAGEDLKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GFD ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFDAAMEEQRRRAREASGFGADYNAM-IRVDSA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD L V +L V+GK V ++ G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDHLELNGKVTALFVDGKSVDAINAGQEAVVVLDQTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G N AV + + +++G H G + G L+VG V+A VD R R +++H+ATH
Sbjct: 513 KGANFSFAVEDTQKYGQAIG----HIGKLAVGSLKVGDAVQADVDEARRARIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G SQ GSLV LRFDF+ + + E+ +E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M L+ AK GA+A+FGEKY E+V++ S
Sbjct: 629 NIMDLEAAKAKGAMALFGEKYDERVRVLS 657
>gi|407470556|ref|YP_006783001.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 2009EL-2071]
gi|407480782|ref|YP_006777931.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 2011C-3493]
gi|410481348|ref|YP_006768894.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 2009EL-2050]
gi|417806210|ref|ZP_12453156.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. LB226692]
gi|417833962|ref|ZP_12480409.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 01-09591]
gi|417866755|ref|ZP_12511795.1| alaS [Escherichia coli O104:H4 str. C227-11]
gi|422988787|ref|ZP_16979560.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. C227-11]
gi|422995679|ref|ZP_16986443.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. C236-11]
gi|423000827|ref|ZP_16991581.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 09-7901]
gi|423004496|ref|ZP_16995242.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 04-8351]
gi|423010996|ref|ZP_17001730.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-3677]
gi|423020224|ref|ZP_17010933.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4404]
gi|423025390|ref|ZP_17016087.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4522]
gi|423031211|ref|ZP_17021898.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4623]
gi|423039036|ref|ZP_17029710.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4632 C1]
gi|423044156|ref|ZP_17034823.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4632 C2]
gi|423045884|ref|ZP_17036544.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4632 C3]
gi|423054423|ref|ZP_17043230.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4632 C4]
gi|423061398|ref|ZP_17050194.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4632 C5]
gi|429720253|ref|ZP_19255180.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-9450]
gi|429772153|ref|ZP_19304173.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02030]
gi|429777098|ref|ZP_19309073.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02033-1]
gi|429785825|ref|ZP_19317720.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02092]
gi|429791715|ref|ZP_19323569.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02093]
gi|429792563|ref|ZP_19324412.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02281]
gi|429799139|ref|ZP_19330937.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02318]
gi|429802756|ref|ZP_19334516.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02913]
gi|429812552|ref|ZP_19344235.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-03439]
gi|429813100|ref|ZP_19344779.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-04080]
gi|429818307|ref|ZP_19349942.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-03943]
gi|429904659|ref|ZP_19370638.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-9990]
gi|429908797|ref|ZP_19374761.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-9941]
gi|429914669|ref|ZP_19380616.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-4984]
gi|429919699|ref|ZP_19385630.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-5604]
gi|429925519|ref|ZP_19391432.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-4986]
gi|429929455|ref|ZP_19395357.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-4987]
gi|429935994|ref|ZP_19401880.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-4988]
gi|429941674|ref|ZP_19407548.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-5603]
gi|429944355|ref|ZP_19410217.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-6006]
gi|429951913|ref|ZP_19417759.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec12-0465]
gi|429955262|ref|ZP_19421094.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec12-0466]
gi|340733606|gb|EGR62737.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 01-09591]
gi|340739505|gb|EGR73740.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. LB226692]
gi|341920044|gb|EGT69653.1| alaS [Escherichia coli O104:H4 str. C227-11]
gi|354862514|gb|EHF22952.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. C236-11]
gi|354867798|gb|EHF28220.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. C227-11]
gi|354868196|gb|EHF28614.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 04-8351]
gi|354873798|gb|EHF34175.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 09-7901]
gi|354880479|gb|EHF40815.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-3677]
gi|354888313|gb|EHF48572.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4404]
gi|354892221|gb|EHF52430.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4522]
gi|354893427|gb|EHF53630.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4632 C1]
gi|354896230|gb|EHF56401.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4623]
gi|354897607|gb|EHF57764.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4632 C2]
gi|354911459|gb|EHF71463.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4632 C5]
gi|354914583|gb|EHF74566.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4632 C3]
gi|354916365|gb|EHF76337.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4632 C4]
gi|406776510|gb|AFS55934.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 2009EL-2050]
gi|407053079|gb|AFS73130.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 2011C-3493]
gi|407066591|gb|AFS87638.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 2009EL-2071]
gi|429347355|gb|EKY84128.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02092]
gi|429358391|gb|EKY95060.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02030]
gi|429360447|gb|EKY97105.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02093]
gi|429361204|gb|EKY97860.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02033-1]
gi|429363815|gb|EKZ00440.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02318]
gi|429375860|gb|EKZ12392.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02281]
gi|429377778|gb|EKZ14293.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-03439]
gi|429389423|gb|EKZ25843.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02913]
gi|429393592|gb|EKZ29983.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-03943]
gi|429403261|gb|EKZ39545.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-04080]
gi|429405748|gb|EKZ42012.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-9990]
gi|429408629|gb|EKZ44864.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-9450]
gi|429413065|gb|EKZ49254.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-4987]
gi|429415794|gb|EKZ51952.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-4984]
gi|429419475|gb|EKZ55610.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-4986]
gi|429430954|gb|EKZ67004.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-4988]
gi|429434990|gb|EKZ71010.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-5603]
gi|429437216|gb|EKZ73223.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-6006]
gi|429442333|gb|EKZ78290.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-5604]
gi|429446483|gb|EKZ82411.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec12-0465]
gi|429450688|gb|EKZ86581.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-9941]
gi|429456161|gb|EKZ92007.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec12-0466]
Length = 876
Score = 578 bits (1490), Expect = e-162, Method: Compositional matrix adjust.
Identities = 316/689 (45%), Positives = 437/689 (63%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +I+ +++ + D +N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRTLIQAVAKVTGAT-----DLSNKSLRVIADHIRSCAFLIADGVMP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K F + I++ D+K ++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAKE--------TFFYKLVGPLIDVMGSAGEDLKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGFGADYNAM-IRVDSA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD L V +L V+GK V ++ G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G N AV + + +++G H G + G L+VG V+A VD R R +++H+ATH
Sbjct: 513 KGANFSFAVEDTQKYGQAIG----HIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G SQ GSLV LRFDF+ + + E+ +E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M L+ AK GA+A+FGEKY E+V++ S
Sbjct: 629 NIMDLEAAKAKGAMALFGEKYDERVRVLS 657
>gi|146312813|ref|YP_001177887.1| alanyl-tRNA synthetase [Enterobacter sp. 638]
gi|205830088|sp|A4WDQ6.1|SYA_ENT38 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|145319689|gb|ABP61836.1| alanyl-tRNA synthetase [Enterobacter sp. 638]
Length = 875
Score = 578 bits (1490), Expect = e-162, Method: Compositional matrix adjust.
Identities = 317/689 (46%), Positives = 437/689 (63%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQYAWELLTGENWFNLPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGTAEEDGDRYIEIWNIVFMQFNRQIDGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +IK +E+ + D +N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFSTLIKSVAEVTGAT-----DLSNKSLRVIADHIRSCAFLIADGVIP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K L G + + + EL K ++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAKDTFFYKLVGPLVGVMGDAGEEL--------KRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ L+ T L G+ AF LYDT+GFP
Sbjct: 354 SQVEQVLKTEEEQFARTLERGLALLDEELSQLTGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQ------AAHNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRARESSGFGADYNAM-IRVDSA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD L A V +L V+GK V +S G D V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFQGYDRLELNAKVTALFVDGKAVDSISAGQDAVVVLDKTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G AV + + +++G H G + G L+VG V+A VD R+R +++H+ATH
Sbjct: 513 KGNGFSFAVSDTQKYGQAIG----HIGKLASGSLKVGEGVQAEVDEARRERIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL+ V+G +Q GSLV LRFDF+ + +E+ +E ++N I ++T
Sbjct: 569 LMHAALRDVLGTHVAQKGSLVNDKILRFDFSHFEAMKPSEIRAVEDMVNAQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M L+ A+ GA+A+FGEKY E+V++ S
Sbjct: 629 NIMDLEAARAKGAMALFGEKYDERVRVLS 657
>gi|16761603|ref|NP_457220.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhi str. CT18]
gi|29143087|ref|NP_806429.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhi str. Ty2]
gi|213052376|ref|ZP_03345254.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhi str. E00-7866]
gi|213426121|ref|ZP_03358871.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhi str. E02-1180]
gi|213579902|ref|ZP_03361728.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhi str. E98-0664]
gi|213622611|ref|ZP_03375394.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhi str. E98-2068]
gi|213852307|ref|ZP_03381839.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhi str. M223]
gi|289824467|ref|ZP_06544043.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhi str. E98-3139]
gi|378960884|ref|YP_005218370.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhi str. P-stx-12]
gi|20532252|sp|Q8Z4D5.1|SYA_SALTI RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|25293091|pir||AF0843 alanine-tRNA ligase (EC 6.1.1.7) - Salmonella enterica subsp.
enterica serovar Typhi (strain CT18)
gi|16503904|emb|CAD05933.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhi]
gi|29138720|gb|AAO70289.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhi str. Ty2]
gi|374354756|gb|AEZ46517.1| Alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhi str. P-stx-12]
Length = 876
Score = 578 bits (1489), Expect = e-162, Method: Compositional matrix adjust.
Identities = 317/689 (46%), Positives = 438/689 (63%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWFALPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +I+ +++ S D N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRTLIEAVAKVTG-----STDLGNKSLRVIADHIRSCAFLVADGVLP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K F + IE+ ++K ++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAKE--------TFFYKLVGPLIEVMGSAGEELKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLQGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGFGADYNAM-IRVDSA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD L V +L V+GK V ++ G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDHLELNGKVTALFVDGKAVEAINAGQEAVVVLDQTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G AV + + +++G H G + G L+VG V+A VD R R +++H+ATH
Sbjct: 513 KGAGFTFAVDDTQKYGQAIG----HLGKLSAGALKVGDAVQADVDEARRARIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G +Q GSLV+ LRFDF+ + + +E+ E+E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVAQKGSLVSDKVLRFDFSHNEAMKPSEIREVEDLVNAQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M LD AK GA+A+FGEKY E+V++ S
Sbjct: 629 NIMDLDAAKAKGAMALFGEKYDERVRVLS 657
>gi|284097293|ref|ZP_06385431.1| alanyl-tRNA synthetase [Candidatus Poribacteria sp. WGA-A3]
gi|283831199|gb|EFC35171.1| alanyl-tRNA synthetase [Candidatus Poribacteria sp. WGA-A3]
Length = 734
Score = 578 bits (1489), Expect = e-162, Method: Compositional matrix adjust.
Identities = 297/682 (43%), Positives = 437/682 (64%), Gaps = 36/682 (5%)
Query: 46 FPSSGDSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVP 104
P + +R+ FLDF+ + H V+PSASL+P+ DPT+L T AGM QFK +FLG+ R
Sbjct: 1 MPLNAHELRQSFLDFFHAADHAVVPSASLLPQADPTLLFTNAGMNQFKRVFLGEEQRSYS 60
Query: 105 RAATSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFG 160
RA + QRC+R ND+ENVG T RHHTFFEMLGNFSFGDYFKK+A+ + W++ T G
Sbjct: 61 RAVSVQRCMRAGGKHNDLENVGYTRRHHTFFEMLGNFSFGDYFKKDAVHYGWDYLTKTLG 120
Query: 161 LPANRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDF 220
LPA++LW++V++DDDEAFE+W VGVP I R+G DNFW G TGPCGPCSEI+ D
Sbjct: 121 LPADQLWVTVFQDDDEAFELWENSVGVPAARIVRLGYKDNFWQMGETGPCGPCSEIHIDQ 180
Query: 221 HPDRGCSDVDLG---DDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARIL 277
GC D R++E +NLVFMQ+++ +G+L PL + +IDTG+GLER+A ++
Sbjct: 181 GAALGCGRASCAVGCDCDRYLEIWNLVFMQFDRDAEGNLHPLPKPSIDTGMGLERLAAVV 240
Query: 278 QKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSN 337
Q V +NY TDL P++ + Y + ++ ++ ++++I DHLRAI +++ DG+ PSN
Sbjct: 241 QGVDSNYATDLFMPLLSAIAVRTGCGYGK-DEASDRSMRVIADHLRAITFMIVDGILPSN 299
Query: 338 IGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQR 397
GRGYV+RR++RRA R GRLLG+ L G + EL+ D+ K E
Sbjct: 300 EGRGYVLRRILRRASRHGRLLGVTEPFLYELTGTVATEMEGAYPELAQAGDTCRKVVEG- 358
Query: 398 ILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVE 457
EE RF+ TL++G +L++M+A+A E+GS L G+ F LYDT+GFP++
Sbjct: 359 -------EEERFIGTLDQGLPILNRMVAEA-----EAGS---LDGESVFKLYDTYGFPLD 403
Query: 458 ITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDS---ADLAEKIPDTEFLG 514
+ +E A E G+ D++GF +E QR +A +AV ++ + +L +++ TEFLG
Sbjct: 404 LIEEAAREQGLVADLEGFQRALEAQR--DRARKSAVFVAEQEKPFITELTQRLRPTEFLG 461
Query: 515 YDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQ 574
Y L ++++V+++L +V +G DVE++L+ TPFY E GGQ+GD G L +G
Sbjct: 462 YQALQSESVVQAMLKGDALADEVVEGDDVELVLDATPFYPEGGGQVGDQGTLTGREGR-- 519
Query: 575 QTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAA 634
+++++ K G + +HKGT+ G + G + A VD R A +HTATHLL AA
Sbjct: 520 ----IQIRETTKVSGKLLLHKGTVVAGRVRTGEPLAATVDSVTRHGAARNHTATHLLHAA 575
Query: 635 LKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMAL 694
L++V+G + Q GSLVA +RLRFDF++ +PL +LEEIE ++N + ++T VM +
Sbjct: 576 LREVLGPQVKQYGSLVAPNRLRFDFSYFKPLRTRDLEEIEAMVNFHVLGNTFVRTDVMGI 635
Query: 695 DDAKRAGAIAMFGEKYGEQVKI 716
+A AGA+A FG+KYGE+V++
Sbjct: 636 QEAIHAGALAFFGDKYGERVRV 657
>gi|74313262|ref|YP_311681.1| alanyl-tRNA synthetase [Shigella sonnei Ss046]
gi|157158305|ref|YP_001464004.1| alanyl-tRNA synthetase [Escherichia coli E24377A]
gi|191167095|ref|ZP_03028916.1| alanyl-tRNA synthetase [Escherichia coli B7A]
gi|193065058|ref|ZP_03046133.1| alanyl-tRNA synthetase [Escherichia coli E22]
gi|193069650|ref|ZP_03050602.1| alanyl-tRNA synthetase [Escherichia coli E110019]
gi|194427866|ref|ZP_03060412.1| alanyl-tRNA synthetase [Escherichia coli B171]
gi|209920136|ref|YP_002294220.1| alanyl-tRNA synthetase [Escherichia coli SE11]
gi|218555239|ref|YP_002388152.1| alanyl-tRNA synthetase [Escherichia coli IAI1]
gi|218696288|ref|YP_002403955.1| alanyl-tRNA synthetase [Escherichia coli 55989]
gi|260845339|ref|YP_003223117.1| alanyl-tRNA synthetase [Escherichia coli O103:H2 str. 12009]
gi|260856802|ref|YP_003230693.1| alanyl-tRNA synthetase [Escherichia coli O26:H11 str. 11368]
gi|260869370|ref|YP_003235772.1| alanyl-tRNA synthetase [Escherichia coli O111:H- str. 11128]
gi|293449010|ref|ZP_06663431.1| alanyl-tRNA synthetase [Escherichia coli B088]
gi|307314418|ref|ZP_07594023.1| alanyl-tRNA synthetase [Escherichia coli W]
gi|331669429|ref|ZP_08370275.1| alanine--tRNA ligase [Escherichia coli TA271]
gi|332280649|ref|ZP_08393062.1| alanyl-tRNA synthetase [Shigella sp. D9]
gi|378711884|ref|YP_005276777.1| alanyl-tRNA synthetase [Escherichia coli KO11FL]
gi|383179835|ref|YP_005457840.1| alanyl-tRNA synthetase [Shigella sonnei 53G]
gi|386610056|ref|YP_006125542.1| alanyl-tRNA synthetase [Escherichia coli W]
gi|386700397|ref|YP_006164234.1| alanyl-tRNA synthetase [Escherichia coli KO11FL]
gi|386710547|ref|YP_006174268.1| alanyl-tRNA synthetase [Escherichia coli W]
gi|415818369|ref|ZP_11508091.1| alanyl-tRNA synthetase [Escherichia coli OK1180]
gi|418942124|ref|ZP_13495419.1| alanyl-tRNA synthetase [Escherichia coli O157:H43 str. T22]
gi|419387306|ref|ZP_13928180.1| alanyl-tRNA synthetase [Escherichia coli DEC14D]
gi|419862166|ref|ZP_14384783.1| alanyl-tRNA synthetase [Escherichia coli O103:H25 str. CVM9340]
gi|419867527|ref|ZP_14389842.1| alanyl-tRNA synthetase [Escherichia coli O103:H2 str. CVM9450]
gi|419875139|ref|ZP_14397020.1| alanyl-tRNA synthetase [Escherichia coli O111:H11 str. CVM9534]
gi|419886128|ref|ZP_14406779.1| alanyl-tRNA synthetase [Escherichia coli O111:H11 str. CVM9545]
gi|419887653|ref|ZP_14408222.1| alanyl-tRNA synthetase [Escherichia coli O111:H8 str. CVM9570]
gi|419893005|ref|ZP_14413012.1| alanyl-tRNA synthetase [Escherichia coli O111:H8 str. CVM9574]
gi|419904743|ref|ZP_14423730.1| alanyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM9942]
gi|419907500|ref|ZP_14426323.1| alanyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM10026]
gi|419922450|ref|ZP_14440463.1| alanyl-tRNA synthetase [Escherichia coli 541-15]
gi|419927078|ref|ZP_14444818.1| alanyl-tRNA synthetase [Escherichia coli 541-1]
gi|419948490|ref|ZP_14464786.1| alanyl-tRNA synthetase [Escherichia coli CUMT8]
gi|420090831|ref|ZP_14602593.1| alanyl-tRNA synthetase [Escherichia coli O111:H8 str. CVM9602]
gi|420097685|ref|ZP_14608977.1| alanyl-tRNA synthetase [Escherichia coli O111:H8 str. CVM9634]
gi|420109762|ref|ZP_14619861.1| alanyl-tRNA synthetase [Escherichia coli O111:H11 str. CVM9553]
gi|420115104|ref|ZP_14624681.1| alanyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM10021]
gi|420123401|ref|ZP_14632293.1| alanyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM10030]
gi|420128890|ref|ZP_14637438.1| alanyl-tRNA ligase [Escherichia coli O26:H11 str. CVM10224]
gi|420133449|ref|ZP_14641685.1| alanyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM9952]
gi|422010635|ref|ZP_16357589.1| alanyl-tRNA synthetase [Escherichia coli O111:H11 str. CVM9455]
gi|422760145|ref|ZP_16813905.1| alanyl-tRNA synthetase [Escherichia coli E1167]
gi|422776092|ref|ZP_16829747.1| alanyl-tRNA synthetase [Escherichia coli H120]
gi|422962690|ref|ZP_16972963.1| alanyl-tRNA synthetase [Escherichia coli H494]
gi|423706850|ref|ZP_17681233.1| alanyl-tRNA synthetase [Escherichia coli B799]
gi|424754171|ref|ZP_18182091.1| alanyl-tRNA ligase [Escherichia coli O26:H11 str. CFSAN001629]
gi|424763353|ref|ZP_18190831.1| alanyl-tRNA ligase [Escherichia coli O111:H11 str. CFSAN001630]
gi|424772984|ref|ZP_18200065.1| alanyl-tRNA ligase [Escherichia coli O111:H8 str. CFSAN001632]
gi|427805849|ref|ZP_18972916.1| alanyl-tRNA synthetase [Escherichia coli chi7122]
gi|427810440|ref|ZP_18977505.1| alanyl-tRNA synthetase [Escherichia coli]
gi|432377868|ref|ZP_19620856.1| alanyl-tRNA synthetase [Escherichia coli KTE12]
gi|432766034|ref|ZP_20000456.1| alanyl-tRNA synthetase [Escherichia coli KTE48]
gi|432806846|ref|ZP_20040763.1| alanyl-tRNA synthetase [Escherichia coli KTE91]
gi|432810378|ref|ZP_20044256.1| alanyl-tRNA synthetase [Escherichia coli KTE101]
gi|432828304|ref|ZP_20061925.1| alanyl-tRNA synthetase [Escherichia coli KTE135]
gi|432835624|ref|ZP_20069160.1| alanyl-tRNA synthetase [Escherichia coli KTE136]
gi|432935592|ref|ZP_20134906.1| alanyl-tRNA synthetase [Escherichia coli KTE184]
gi|432968740|ref|ZP_20157653.1| alanyl-tRNA synthetase [Escherichia coli KTE203]
gi|433093037|ref|ZP_20279298.1| alanyl-tRNA synthetase [Escherichia coli KTE138]
gi|433131209|ref|ZP_20316641.1| alanyl-tRNA synthetase [Escherichia coli KTE163]
gi|433135870|ref|ZP_20321208.1| alanyl-tRNA synthetase [Escherichia coli KTE166]
gi|433194715|ref|ZP_20378698.1| alanyl-tRNA synthetase [Escherichia coli KTE90]
gi|443618718|ref|YP_007382574.1| alanyl-tRNA ligase [Escherichia coli APEC O78]
gi|450220620|ref|ZP_21896389.1| alanyl-tRNA ligase [Escherichia coli O08]
gi|123616373|sp|Q3YYG6.1|SYA_SHISS RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|205830081|sp|A7ZQC5.1|SYA_ECO24 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|73856739|gb|AAZ89446.1| alanyl-tRNA synthetase [Shigella sonnei Ss046]
gi|157080335|gb|ABV20043.1| alanyl-tRNA synthetase [Escherichia coli E24377A]
gi|190902877|gb|EDV62605.1| alanyl-tRNA synthetase [Escherichia coli B7A]
gi|192927355|gb|EDV81974.1| alanyl-tRNA synthetase [Escherichia coli E22]
gi|192957013|gb|EDV87464.1| alanyl-tRNA synthetase [Escherichia coli E110019]
gi|194414099|gb|EDX30375.1| alanyl-tRNA synthetase [Escherichia coli B171]
gi|209913395|dbj|BAG78469.1| alanyl-tRNA synthase [Escherichia coli SE11]
gi|218353020|emb|CAU98845.1| alanyl-tRNA synthetase [Escherichia coli 55989]
gi|218362007|emb|CAQ99613.1| alanyl-tRNA synthetase [Escherichia coli IAI1]
gi|257755451|dbj|BAI26953.1| alanyl-tRNA synthetase [Escherichia coli O26:H11 str. 11368]
gi|257760486|dbj|BAI31983.1| alanyl-tRNA synthetase [Escherichia coli O103:H2 str. 12009]
gi|257765726|dbj|BAI37221.1| alanyl-tRNA synthetase [Escherichia coli O111:H- str. 11128]
gi|291322100|gb|EFE61529.1| alanyl-tRNA synthetase [Escherichia coli B088]
gi|306905986|gb|EFN36507.1| alanyl-tRNA synthetase [Escherichia coli W]
gi|315061973|gb|ADT76300.1| alanyl-tRNA synthetase [Escherichia coli W]
gi|323180115|gb|EFZ65667.1| alanyl-tRNA synthetase [Escherichia coli OK1180]
gi|323377445|gb|ADX49713.1| alanyl-tRNA synthetase [Escherichia coli KO11FL]
gi|323946425|gb|EGB42453.1| alanyl-tRNA synthetase [Escherichia coli H120]
gi|324119946|gb|EGC13824.1| alanyl-tRNA synthetase [Escherichia coli E1167]
gi|331063097|gb|EGI35010.1| alanine--tRNA ligase [Escherichia coli TA271]
gi|332103001|gb|EGJ06347.1| alanyl-tRNA synthetase [Shigella sp. D9]
gi|371591982|gb|EHN80910.1| alanyl-tRNA synthetase [Escherichia coli H494]
gi|375322569|gb|EHS68319.1| alanyl-tRNA synthetase [Escherichia coli O157:H43 str. T22]
gi|378230302|gb|EHX90424.1| alanyl-tRNA synthetase [Escherichia coli DEC14D]
gi|383391924|gb|AFH16882.1| alanyl-tRNA synthetase [Escherichia coli KO11FL]
gi|383406239|gb|AFH12482.1| alanyl-tRNA synthetase [Escherichia coli W]
gi|385710983|gb|EIG47951.1| alanyl-tRNA synthetase [Escherichia coli B799]
gi|388346107|gb|EIL11850.1| alanyl-tRNA synthetase [Escherichia coli O103:H25 str. CVM9340]
gi|388346600|gb|EIL12310.1| alanyl-tRNA synthetase [Escherichia coli O103:H2 str. CVM9450]
gi|388347066|gb|EIL12763.1| alanyl-tRNA synthetase [Escherichia coli O111:H11 str. CVM9545]
gi|388349717|gb|EIL15185.1| alanyl-tRNA synthetase [Escherichia coli O111:H11 str. CVM9534]
gi|388362338|gb|EIL26361.1| alanyl-tRNA synthetase [Escherichia coli O111:H8 str. CVM9570]
gi|388366862|gb|EIL30573.1| alanyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM9942]
gi|388369166|gb|EIL32786.1| alanyl-tRNA synthetase [Escherichia coli O111:H8 str. CVM9574]
gi|388377045|gb|EIL39893.1| alanyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM10026]
gi|388396139|gb|EIL57267.1| alanyl-tRNA synthetase [Escherichia coli 541-15]
gi|388408278|gb|EIL68631.1| alanyl-tRNA synthetase [Escherichia coli 541-1]
gi|388421264|gb|EIL80882.1| alanyl-tRNA synthetase [Escherichia coli CUMT8]
gi|394383380|gb|EJE60980.1| alanyl-tRNA synthetase [Escherichia coli O111:H8 str. CVM9634]
gi|394384619|gb|EJE62178.1| alanyl-tRNA ligase [Escherichia coli O26:H11 str. CVM10224]
gi|394385059|gb|EJE62604.1| alanyl-tRNA synthetase [Escherichia coli O111:H8 str. CVM9602]
gi|394393913|gb|EJE70558.1| alanyl-tRNA synthetase [Escherichia coli O111:H11 str. CVM9455]
gi|394405776|gb|EJE80878.1| alanyl-tRNA synthetase [Escherichia coli O111:H11 str. CVM9553]
gi|394407236|gb|EJE82098.1| alanyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM10021]
gi|394417237|gb|EJE90987.1| alanyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM10030]
gi|394425709|gb|EJE98645.1| alanyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM9952]
gi|412964031|emb|CCK47957.1| alanyl-tRNA synthetase [Escherichia coli chi7122]
gi|412970619|emb|CCJ45269.1| alanyl-tRNA synthetase [Escherichia coli]
gi|421934086|gb|EKT91864.1| alanyl-tRNA ligase [Escherichia coli O26:H11 str. CFSAN001629]
gi|421937233|gb|EKT94850.1| alanyl-tRNA ligase [Escherichia coli O111:H8 str. CFSAN001632]
gi|421940082|gb|EKT97562.1| alanyl-tRNA ligase [Escherichia coli O111:H11 str. CFSAN001630]
gi|430897453|gb|ELC19655.1| alanyl-tRNA synthetase [Escherichia coli KTE12]
gi|431309044|gb|ELF97321.1| alanyl-tRNA synthetase [Escherichia coli KTE48]
gi|431354098|gb|ELG40841.1| alanyl-tRNA synthetase [Escherichia coli KTE91]
gi|431360729|gb|ELG47328.1| alanyl-tRNA synthetase [Escherichia coli KTE101]
gi|431384238|gb|ELG68299.1| alanyl-tRNA synthetase [Escherichia coli KTE136]
gi|431384303|gb|ELG68363.1| alanyl-tRNA synthetase [Escherichia coli KTE135]
gi|431451941|gb|ELH32395.1| alanyl-tRNA synthetase [Escherichia coli KTE184]
gi|431469227|gb|ELH49157.1| alanyl-tRNA synthetase [Escherichia coli KTE203]
gi|431609160|gb|ELI78489.1| alanyl-tRNA synthetase [Escherichia coli KTE138]
gi|431645156|gb|ELJ12806.1| alanyl-tRNA synthetase [Escherichia coli KTE163]
gi|431655112|gb|ELJ22152.1| alanyl-tRNA synthetase [Escherichia coli KTE166]
gi|431714685|gb|ELJ78866.1| alanyl-tRNA synthetase [Escherichia coli KTE90]
gi|443423226|gb|AGC88130.1| alanyl-tRNA ligase [Escherichia coli APEC O78]
gi|449316507|gb|EMD06621.1| alanyl-tRNA ligase [Escherichia coli O08]
Length = 876
Score = 578 bits (1489), Expect = e-162, Method: Compositional matrix adjust.
Identities = 316/689 (45%), Positives = 437/689 (63%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +I+ +++ + D +N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRTLIQAVAKVTGAT-----DLSNKSLRVIADHIRSCAFLIADGVMP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K F + I++ D+K ++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAKE--------TFFYKLVGPLIDVMGSAGEDLKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGFGADYNAM-IRVDSA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD L V +L V+GK V ++ G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G N AV + + +++G H G + G L+VG V+A VD R R +++H+ATH
Sbjct: 513 KGANFSFAVEDTQKYGQAIG----HIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G SQ GSLV LRFDF+ + + E+ +E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M L+ AK GA+A+FGEKY E+V++ S
Sbjct: 629 NIMDLEAAKAKGAMALFGEKYDERVRVLS 657
>gi|170682603|ref|YP_001744844.1| alanyl-tRNA synthetase [Escherichia coli SMS-3-5]
gi|432442120|ref|ZP_19684458.1| alanyl-tRNA synthetase [Escherichia coli KTE189]
gi|432447225|ref|ZP_19689523.1| alanyl-tRNA synthetase [Escherichia coli KTE191]
gi|433014935|ref|ZP_20203274.1| alanyl-tRNA synthetase [Escherichia coli KTE104]
gi|433024508|ref|ZP_20212487.1| alanyl-tRNA synthetase [Escherichia coli KTE106]
gi|433322487|ref|ZP_20399930.1| alanyl-tRNA ligase [Escherichia coli J96]
gi|205830086|sp|B1LQ15.1|SYA_ECOSM RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|170520321|gb|ACB18499.1| alanyl-tRNA synthetase [Escherichia coli SMS-3-5]
gi|430965368|gb|ELC82789.1| alanyl-tRNA synthetase [Escherichia coli KTE189]
gi|430972071|gb|ELC89069.1| alanyl-tRNA synthetase [Escherichia coli KTE191]
gi|431529252|gb|ELI05954.1| alanyl-tRNA synthetase [Escherichia coli KTE104]
gi|431533732|gb|ELI10225.1| alanyl-tRNA synthetase [Escherichia coli KTE106]
gi|432348993|gb|ELL43435.1| alanyl-tRNA ligase [Escherichia coli J96]
Length = 876
Score = 578 bits (1489), Expect = e-162, Method: Compositional matrix adjust.
Identities = 316/689 (45%), Positives = 437/689 (63%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +I+ +++ + D +N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRTLIQAVAKVTGAT-----DLSNKSLRVIADHIRSCAFLIADGVMP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K F + I++ D+K ++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAKE--------TFFYKLVGPLIDVMGSAGEDLKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGFGADYNAM-IRVDSA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD L V +L V+GK V ++ G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G N AV + + +++G H G + G L+VG V+A VD R R +++H+ATH
Sbjct: 513 KGANFSFAVEDTQKYGQAIG----HIGKLATGSLKVGDAVQADVDEARRARIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G SQ GSLV LRFDF+ + + E+ +E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M L+ AK GA+A+FGEKY E+V++ S
Sbjct: 629 NIMDLEAAKAKGAMALFGEKYDERVRVLS 657
>gi|384423811|ref|YP_005633169.1| alanyl-tRNA synthetase [Vibrio cholerae LMA3984-4]
gi|327483364|gb|AEA77771.1| Alanyl-tRNA synthetase [Vibrio cholerae LMA3984-4]
Length = 860
Score = 578 bits (1489), Expect = e-162, Method: Compositional matrix adjust.
Identities = 315/687 (45%), Positives = 436/687 (63%), Gaps = 51/687 (7%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S D +R+ FL F+ S+GH+++ S+SLVP DPT+L T AGM QFK FLG R RA
Sbjct: 4 STDEVRRAFLSFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDCFLGLEKRAYTRAT 63
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
T+QRC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AIQ+AWEF T LP
Sbjct: 64 TAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIQYAWEFLTDVLQLPK 123
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG--------ADDNFWNSGATGPCGPCSE 215
RL ++VYE DDEAF+IWNK+VG+P + I R+G DNFW G TGPCGPC+E
Sbjct: 124 ERLLVTVYETDDEAFDIWNKKVGIPADRIIRIGDKKGGKKFDSDNFWQMGDTGPCGPCTE 183
Query: 216 IYYDFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLER 272
I+YD H D G D RFIE +N VFMQ+N+ DG++EPL + ++DTG+G+ER
Sbjct: 184 IFYD-HGDHIWGGPPGSPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPSVDTGMGIER 242
Query: 273 IARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDG 332
I+ I+Q V +NYE D+ +IK A++ + Y D TN +L+++ DH+R+ +L+ DG
Sbjct: 243 ISAIMQGVHSNYEIDVFQTLIKAAADA--IGY---QDLTNQSLRVVADHIRSCAFLIVDG 297
Query: 333 VFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVK 392
V PSN GRGYV+RR+IRRAVR G LG +G L G+ + +EL
Sbjct: 298 VMPSNEGRGYVLRRIIRRAVRHGNKLGAQGAFFHKLVGSLAEVMGTAGVELK-------- 349
Query: 393 AREQRILEELKR-EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDT 451
++Q ++E++ R EE F +TL+RG +L+ DAL + SG V L G+ F LYDT
Sbjct: 350 -KQQALVEKVLRIEEENFGRTLDRGMSILN----DALDQL--SGQV--LDGETVFKLYDT 400
Query: 452 FGFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTE 511
+GFP ++T +VA E G S+D GF+ ME QR Q A A + D ++ L + +TE
Sbjct: 401 YGFPADLTNDVARERGFSIDEAGFEQAMEEQR---QRAREAGQFGTDYNS-LIKSATNTE 456
Query: 512 FLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQG 571
F GY +++V + V G V +S G ++L+ TPFYAESGGQ GD G L G
Sbjct: 457 FCGYTASRGQSVVREMFVEGAEVSTLSAGDKAIIVLDNTPFYAESGGQCGDTGVLKTDAG 516
Query: 572 TNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLL 631
+ V+D +K LG+ H G + +GVL G +V+AIVD K R ++H+ATHLL
Sbjct: 517 ------IFHVEDTQK-LGNAIAHHGVLAQGVLATGDQVDAIVDEKRRAAISLNHSATHLL 569
Query: 632 QAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKV 691
AAL+KV+G+ +Q GSLV + LRFDF+ + E++E+ERL+N I + ++T +
Sbjct: 570 HAALRKVLGEHVAQKGSLVRAETLRFDFSHLEAMTPAEIKEVERLVNQEIRHNHNIETNI 629
Query: 692 MALDDAKRAGAIAMFGEKYGEQVKISS 718
M +D+AK GA+A+FGEKY +QV++ S
Sbjct: 630 MNIDEAKAKGAMALFGEKYDDQVRVLS 656
>gi|331678669|ref|ZP_08379343.1| alanine--tRNA ligase [Escherichia coli H591]
gi|331073499|gb|EGI44820.1| alanine--tRNA ligase [Escherichia coli H591]
Length = 876
Score = 578 bits (1489), Expect = e-162, Method: Compositional matrix adjust.
Identities = 316/689 (45%), Positives = 437/689 (63%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +I+ +++ + D +N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRTLIQAVAKVTGAT-----DLSNKSLRVIADHIRSCAFLIADGVMP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K F + I++ D+K ++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAKE--------TFFYKLVGPLIDVMGSAGEDLKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGFGADYNAM-IRVDSA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD L V +L V+GK V ++ G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G N AV + + +++G H G + G L+VG V+A VD R R +++H+ATH
Sbjct: 513 KGANFSFAVEDTQKYGQAIG----HIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G SQ GSLV LRFDF+ + + E+ +E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M L+ AK GA+A+FGEKY E+V++ S
Sbjct: 629 NIMDLEAAKAKGAMALFGEKYDERVRVLS 657
>gi|417663255|ref|ZP_12312835.1| alanyl-tRNA synthetase [Escherichia coli AA86]
gi|432889934|ref|ZP_20102980.1| alanyl-tRNA synthetase [Escherichia coli KTE165]
gi|330908728|gb|EGH37242.1| alanyl-tRNA synthetase [Escherichia coli AA86]
gi|431432808|gb|ELH14484.1| alanyl-tRNA synthetase [Escherichia coli KTE165]
Length = 876
Score = 578 bits (1489), Expect = e-162, Method: Compositional matrix adjust.
Identities = 317/689 (46%), Positives = 437/689 (63%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +I+ +++ + D +N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRTLIQAVAKVTGAT-----DLSNKSLRVIADHIRSCAFLIADGVMP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K F + I++ D+K ++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAKE--------TFFYKLVGPLIDVMGSAGEDLKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GFD ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFDAAMEEQRRRAREASGFGADYNAM-IRVDSA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD L V +L V+GK V ++ G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDHLELNGKVTALFVDGKSVDAINAGQEAVVVLDQTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G N AV + + +++G H G + G L+VG V+A VD R R +++H+ATH
Sbjct: 513 KGANFSFAVEDTQKYGQAIG----HIGKLAVGSLKVGDAVQADVDEARRARIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G SQ GSLV LRFDF+ + + E+ +E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRVVEDLVNAQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M L+ AK GA+A+FGEKY E+V++ S
Sbjct: 629 NIMDLEAAKAKGAMALFGEKYDERVRVLS 657
>gi|392394482|ref|YP_006431084.1| alanyl-tRNA synthetase [Desulfitobacterium dehalogenans ATCC 51507]
gi|390525560|gb|AFM01291.1| alanyl-tRNA synthetase [Desulfitobacterium dehalogenans ATCC 51507]
Length = 875
Score = 578 bits (1489), Expect = e-162, Method: Compositional matrix adjust.
Identities = 318/677 (46%), Positives = 439/677 (64%), Gaps = 30/677 (4%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
+G+ +R FL F+ S+GHK+LPSASL+P +DPT+LLT+AGM+ FKP F+ KV PRA
Sbjct: 3 TGNQLRDMFLKFFKSKGHKILPSASLIPKDDPTLLLTVAGMVPFKPYFMRKVEPPFPRAT 62
Query: 108 TSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
TSQ+C+RT D+E VG+T+RHHTFFEMLGNFSFGDYFK +AI WAWEF T LP ++LW
Sbjct: 63 TSQKCVRTPDLEVVGKTARHHTFFEMLGNFSFGDYFKSQAIPWAWEFVTEVLKLPIDQLW 122
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCS 227
I+V+ +D+EA +W ++ GV E IK +N W +G GPCG CSEIY D R C
Sbjct: 123 ITVHPEDEEAKNLWIEKTGVSPERIKY--DPENLWAAGPVGPCGYCSEIYVDLGEQRSCG 180
Query: 228 D--VDLGDDT-RFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNY 284
LG D RF+E +NLVFMQYN+ + G L PL ++NIDTG+GLERIA ++Q V +N+
Sbjct: 181 KPGCALGCDCDRFLEIWNLVFMQYNRDESGMLTPLPKQNIDTGMGLERIASVMQGVASNF 240
Query: 285 ETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVV 344
+TDL PII K +EL+ Y N +++ +K++ DH RA+ ++LSDG+ P + GRGYV+
Sbjct: 241 DTDLFLPIINKVAELSGTPY-HDNPKSDTAMKVVADHTRAVSFMLSDGIRPGSEGRGYVL 299
Query: 345 RRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKR 404
RR++RRA+R RLLGI + LE FL I ++ +H ++K E IL L+
Sbjct: 300 RRILRRAIRYARLLGID---KPFLEQIFL--IIQRDY---SHHYPELKENENFILNHLRL 351
Query: 405 EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAE 464
EE F TLE+G Q+L + + +E+G LSG DAF LY+T+GFPVE+T+E+
Sbjct: 352 EEKNFQATLEQG----TQILQEKVKTLQEAGEA-VLSGGDAFYLYETYGFPVELTEEMLI 406
Query: 465 EHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEK---IPDTEFLGYDTLSAK 521
E G+SVDM+ F+ E RR ++ +K +V +SA ++EK + T FLGY L+A
Sbjct: 407 EQGMSVDMEAFNAAAEEHRRLAKEQSQQMK-AVQESAAISEKAKALGTTPFLGYHELAAN 465
Query: 522 AIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEV 581
VE+L +G+ V ++G +V + L +PFYAESGGQI D G + Q A ++
Sbjct: 466 TKVEALFRDGEEVKDAAEGDEVLIFLRESPFYAESGGQISDSGVI------RTQRAEAKL 519
Query: 582 KDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQ 641
+VKK + H+ I +GVL G EVEA+VD LR HH+ATHLLQ+AL+ V+G+
Sbjct: 520 MEVKKGVTGTVYHRFLITQGVLNTGDEVEALVDEHLRLATARHHSATHLLQSALRTVLGE 579
Query: 642 ETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAG 701
QAGSLV DRLRFDF L EL+ +E L+N + + + M+LD AK +G
Sbjct: 580 HVQQAGSLVTPDRLRFDFTHFSALTPAELQRVEDLLNEAVLANMPVTAEEMSLDAAKASG 639
Query: 702 AIAMFGEKYGEQVKISS 718
A A+FGEKYG+ V++ S
Sbjct: 640 ATALFGEKYGDTVRVVS 656
>gi|113461263|ref|YP_719332.1| alanyl-tRNA synthetase [Haemophilus somnus 129PT]
gi|123132149|sp|Q0I426.1|SYA_HAES1 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|112823306|gb|ABI25395.1| alanyl-tRNA synthetase [Haemophilus somnus 129PT]
Length = 874
Score = 578 bits (1489), Expect = e-162, Method: Compositional matrix adjust.
Identities = 316/680 (46%), Positives = 434/680 (63%), Gaps = 48/680 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+++ S+SLVPE DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 7 IRQAFLDFFHSKGHQIVDSSSLVPENDPTLLFTNAGMNQFKDVFLGLDTRSYTRATTAQR 66
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI++AWEF T GLP +
Sbjct: 67 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAIKFAWEFLTSPEWLGLPEEK 126
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
L+++VYE DDEA+ IW+K VGVP HI R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 127 LYVTVYETDDEAYGIWHKGVGVPENHIIRIGDNKGAPYASDNFWAMGDTGPCGPCTEIFY 186
Query: 219 DF--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARI 276
D H G + D R+IE +N+VFMQ+N+ DG++E L + ++DTG+GLERI+ +
Sbjct: 187 DHGEHVWGGLPGSEEEDGDRYIEVWNIVFMQFNRLADGTMEKLPKPSVDTGMGLERISAV 246
Query: 277 LQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPS 336
+Q V +NY+ D+ +I K +EL D TN +L++I DH+R+ YL++DGV PS
Sbjct: 247 IQHVNSNYDIDIFQKLIAKVAELTG-----EKDLTNKSLRVIADHIRSCAYLIADGVIPS 301
Query: 337 NIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQ 396
N GRGYV+RR+IRRAVR G LLG K F + I++ DVKA++
Sbjct: 302 NEGRGYVLRRIIRRAVRHGHLLGAKD--------TFFYKLVPVLIDVMATAGKDVKAKQA 353
Query: 397 RILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPV 456
+ + L+ EE +F +TLERG LLD+ L + LSG+ AF LYDT+GFP+
Sbjct: 354 NVEKLLRLEEEQFARTLERGLALLDEALINVKDGV--------LSGEVAFKLYDTYGFPL 405
Query: 457 EITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYD 516
++T +V E + +D +GF+ EME QR ++QAA + VD + ++ T F GY
Sbjct: 406 DLTADVCRERNIRIDEEGFEREMEVQRLRAQAAS---RFGVDYN-NVIRVEGTTTFEGYT 461
Query: 517 TLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQT 576
+A V +L GK V +S G V+L+ TPFYAESGGQIGD G L T
Sbjct: 462 EAETQAKVTALFYEGKSVESISAGQSAVVILDDTPFYAESGGQIGDRGCLIATN------ 515
Query: 577 AVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALK 636
+VKD +K G VF H GT+ +G L VG+ + A+VD + R + ++H+ATHLL AAL+
Sbjct: 516 MRFDVKDTQK-YGQVFGHIGTLIQGTLNVGQTINAVVDTEHRTKTSLNHSATHLLHAALR 574
Query: 637 KVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDD 696
+V+G +Q GSLV+ LRFDF + +L EIE L+N I +L+ T+VM +D+
Sbjct: 575 QVLGTHVAQKGSLVSDTILRFDFAQPEAIRQEQLFEIECLVNQHIRANHLVVTEVMPIDE 634
Query: 697 AKRAGAIAMFGEKYGEQVKI 716
AK GA+A+FGEKYG+ V++
Sbjct: 635 AKAKGAMALFGEKYGDVVRV 654
>gi|432863774|ref|ZP_20087615.1| alanyl-tRNA synthetase [Escherichia coli KTE146]
gi|431403639|gb|ELG86910.1| alanyl-tRNA synthetase [Escherichia coli KTE146]
Length = 876
Score = 578 bits (1489), Expect = e-162, Method: Compositional matrix adjust.
Identities = 316/689 (45%), Positives = 437/689 (63%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +I+ +++ + D +N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRTLIQAVAKVTGAT-----DLSNKSLRVIADHIRSCAFLIADGVMP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K F + I++ D+K ++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAKE--------TFFYKLVGPLIDVMGSAGEDLKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGFGADYNAM-IRVDSA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD L V +L V+GK V ++ G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G N AV + + +++G H G + G L+VG V+A VD R R +++H+ATH
Sbjct: 513 KGANFSFAVEDTQKYGQAIG----HIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G SQ GSLV LRFDF+ + + E+ +E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M L+ AK GA+A+FGEKY E+V++ S
Sbjct: 629 NIMELEAAKAKGAMALFGEKYDERVRVLS 657
>gi|306812426|ref|ZP_07446624.1| alanyl-tRNA synthetase [Escherichia coli NC101]
gi|416336702|ref|ZP_11673172.1| Alanyl-tRNA synthetase [Escherichia coli WV_060327]
gi|432382394|ref|ZP_19625334.1| alanyl-tRNA synthetase [Escherichia coli KTE15]
gi|432388326|ref|ZP_19631208.1| alanyl-tRNA synthetase [Escherichia coli KTE16]
gi|432514957|ref|ZP_19752178.1| alanyl-tRNA synthetase [Escherichia coli KTE224]
gi|432612675|ref|ZP_19848833.1| alanyl-tRNA synthetase [Escherichia coli KTE72]
gi|432647227|ref|ZP_19883013.1| alanyl-tRNA synthetase [Escherichia coli KTE86]
gi|432656818|ref|ZP_19892519.1| alanyl-tRNA synthetase [Escherichia coli KTE93]
gi|432700086|ref|ZP_19935237.1| alanyl-tRNA synthetase [Escherichia coli KTE169]
gi|432746651|ref|ZP_19981314.1| alanyl-tRNA synthetase [Escherichia coli KTE43]
gi|432906051|ref|ZP_20114779.1| alanyl-tRNA synthetase [Escherichia coli KTE194]
gi|432939131|ref|ZP_20137281.1| alanyl-tRNA synthetase [Escherichia coli KTE183]
gi|432972811|ref|ZP_20161675.1| alanyl-tRNA synthetase [Escherichia coli KTE207]
gi|432986413|ref|ZP_20175131.1| alanyl-tRNA synthetase [Escherichia coli KTE215]
gi|433039657|ref|ZP_20227253.1| alanyl-tRNA synthetase [Escherichia coli KTE113]
gi|433083566|ref|ZP_20270020.1| alanyl-tRNA synthetase [Escherichia coli KTE133]
gi|433102238|ref|ZP_20288315.1| alanyl-tRNA synthetase [Escherichia coli KTE145]
gi|433145255|ref|ZP_20330394.1| alanyl-tRNA synthetase [Escherichia coli KTE168]
gi|433189439|ref|ZP_20373532.1| alanyl-tRNA synthetase [Escherichia coli KTE88]
gi|433199388|ref|ZP_20383281.1| alanyl-tRNA synthetase [Escherichia coli KTE94]
gi|305854464|gb|EFM54902.1| alanyl-tRNA synthetase [Escherichia coli NC101]
gi|320194836|gb|EFW69465.1| Alanyl-tRNA synthetase [Escherichia coli WV_060327]
gi|430904908|gb|ELC26589.1| alanyl-tRNA synthetase [Escherichia coli KTE16]
gi|430906135|gb|ELC27736.1| alanyl-tRNA synthetase [Escherichia coli KTE15]
gi|431040332|gb|ELD50867.1| alanyl-tRNA synthetase [Escherichia coli KTE224]
gi|431146858|gb|ELE48281.1| alanyl-tRNA synthetase [Escherichia coli KTE72]
gi|431178574|gb|ELE78481.1| alanyl-tRNA synthetase [Escherichia coli KTE86]
gi|431189621|gb|ELE89040.1| alanyl-tRNA synthetase [Escherichia coli KTE93]
gi|431242331|gb|ELF36751.1| alanyl-tRNA synthetase [Escherichia coli KTE169]
gi|431290591|gb|ELF81126.1| alanyl-tRNA synthetase [Escherichia coli KTE43]
gi|431430442|gb|ELH12273.1| alanyl-tRNA synthetase [Escherichia coli KTE194]
gi|431462126|gb|ELH42343.1| alanyl-tRNA synthetase [Escherichia coli KTE183]
gi|431480288|gb|ELH60008.1| alanyl-tRNA synthetase [Escherichia coli KTE207]
gi|431498189|gb|ELH77402.1| alanyl-tRNA synthetase [Escherichia coli KTE215]
gi|431550055|gb|ELI24052.1| alanyl-tRNA synthetase [Escherichia coli KTE113]
gi|431600322|gb|ELI69993.1| alanyl-tRNA synthetase [Escherichia coli KTE133]
gi|431617817|gb|ELI86806.1| alanyl-tRNA synthetase [Escherichia coli KTE145]
gi|431660413|gb|ELJ27285.1| alanyl-tRNA synthetase [Escherichia coli KTE168]
gi|431704266|gb|ELJ68894.1| alanyl-tRNA synthetase [Escherichia coli KTE88]
gi|431719689|gb|ELJ83741.1| alanyl-tRNA synthetase [Escherichia coli KTE94]
Length = 876
Score = 578 bits (1489), Expect = e-162, Method: Compositional matrix adjust.
Identities = 316/689 (45%), Positives = 437/689 (63%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +I+ +++ + D +N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRTLIQAVAKVTGAT-----DLSNKSLRVIADHIRSCAFLIADGVMP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K F + I++ D+K ++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAKE--------TFFYKLVGPLIDVMGSAGEDLKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGFGADYNAM-IRVDSA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD L V +L V+GK V ++ G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDHLELNGKVTALFVDGKSVDAINAGQEAVVVLDQTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G N AV + + +++G H G + G L+VG V+A VD R R +++H+ATH
Sbjct: 513 KGANFSFAVEDTQKYGQAIG----HIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G SQ GSLV LRFDF+ + + E+ +E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M L+ AK GA+A+FGEKY E+V++ S
Sbjct: 629 NIMDLEAAKAKGAMALFGEKYDERVRVLS 657
>gi|432535030|ref|ZP_19772000.1| alanyl-tRNA synthetase [Escherichia coli KTE234]
gi|431059238|gb|ELD68599.1| alanyl-tRNA synthetase [Escherichia coli KTE234]
Length = 876
Score = 578 bits (1489), Expect = e-162, Method: Compositional matrix adjust.
Identities = 316/689 (45%), Positives = 437/689 (63%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +I+ +++ + D +N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRTLIQAVAKVTGAT-----DLSNKSLRVIADHIRSCAFLIADGVMP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K F + I++ D+K ++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAKE--------TFFYKLVGPLIDVMGSAGEDLKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGFGADYNAM-IRVDSA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD L V +L V+GK V ++ G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G N AV + + +++G H G + G L+VG V+A VD R R +++H+ATH
Sbjct: 513 KGANFSFAVEDTQKYGQAIG----HIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G SQ GSLV LRFDF+ + + E+ +E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M L+ AK GA+A+FGEKY E+V++ S
Sbjct: 629 NIMDLEAAKAKGAMALFGEKYDERVRVLS 657
>gi|432482004|ref|ZP_19723958.1| alanyl-tRNA synthetase [Escherichia coli KTE210]
gi|431005675|gb|ELD20689.1| alanyl-tRNA synthetase [Escherichia coli KTE210]
Length = 876
Score = 577 bits (1488), Expect = e-162, Method: Compositional matrix adjust.
Identities = 316/689 (45%), Positives = 437/689 (63%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +I+ +++ + D +N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRTLIQAVAKVTGAT-----DLSNKSLRVIADHIRSCAFLIADGVMP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K F + I++ D+K ++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAKE--------TFFYKLVGPLIDVMGSAGEDLKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGFGADYNAM-IRVDSA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD L V +L V+GK V ++ G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G N AV + + +++G H G + G L+VG V+A VD R R +++H+ATH
Sbjct: 513 KGANFSFAVEDTQKYGQAIG----HIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G SQ GSLV LRFDF+ + + E+ +E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M L+ AK GA+A+FGEKY E+V++ S
Sbjct: 629 NIMDLEAAKAKGAMALFGEKYDERVRVLS 657
>gi|422921775|ref|ZP_16954982.1| alanyl-tRNA synthetase [Vibrio cholerae BJG-01]
gi|341647990|gb|EGS72058.1| alanyl-tRNA synthetase [Vibrio cholerae BJG-01]
Length = 860
Score = 577 bits (1488), Expect = e-162, Method: Compositional matrix adjust.
Identities = 316/687 (45%), Positives = 435/687 (63%), Gaps = 51/687 (7%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S D +R+ FL F+ S+GH+++ S+SLVP DPT+L T AGM QFK FLG R RA
Sbjct: 4 STDEVRRAFLSFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDCFLGLEKRAYTRAT 63
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
T+QRC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AIQ+AWEF T LP
Sbjct: 64 TAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIQYAWEFLTDVLQLPK 123
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG--------ADDNFWNSGATGPCGPCSE 215
RL ++VYE DDEAF+IWNK+VG+P + I R+G DNFW G TGPCGPC+E
Sbjct: 124 ERLLVTVYETDDEAFDIWNKKVGIPADRIIRIGDKKGGKKFDSDNFWQMGDTGPCGPCTE 183
Query: 216 IYYDFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLER 272
I+YD H D G D RFIE +N VFMQ+N+ DG++EPL + ++DTG+G+ER
Sbjct: 184 IFYD-HGDHIWGGPPGSPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPSVDTGMGIER 242
Query: 273 IARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDG 332
I+ I+Q V +NYE D+ +IK A+E + Y D TN +L+++ DH+R+ +L+ DG
Sbjct: 243 ISAIMQGVHSNYEIDVFQTLIKAAAEA--IGY---QDLTNQSLRVVADHIRSCAFLIVDG 297
Query: 333 VFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVK 392
V PSN GRGYV+RR+IRRAVR G LG +G L G + +EL
Sbjct: 298 VMPSNEGRGYVLRRIIRRAVRHGNKLGAQGAFFHKLVGPLAEVMGTAGVELK-------- 349
Query: 393 AREQRILEELKR-EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDT 451
++Q ++E++ R EE F +TL+RG +L+ DAL + SG V L G+ F LYDT
Sbjct: 350 -KQQALVEKVLRIEEENFGRTLDRGMSILN----DALDQL--SGQV--LDGETVFKLYDT 400
Query: 452 FGFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTE 511
+GFP ++T +VA E G S+D GF+ ME QR Q A A + D ++ L + +TE
Sbjct: 401 YGFPADLTNDVARERGFSIDEAGFEQAMEEQR---QRAREAGQFGTDYNS-LIKSATNTE 456
Query: 512 FLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQG 571
F GY +++V + V G V +S G ++L+ TPFYAESGGQ GD G L G
Sbjct: 457 FCGYTASRGQSVVREMFVEGAEVSTLSAGDKAIIVLDNTPFYAESGGQCGDTGVLKTDAG 516
Query: 572 TNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLL 631
+ V+D +K LG+ H G + +GVL G +V+AIVD K R ++H+ATHLL
Sbjct: 517 ------IFHVEDTQK-LGNAIAHHGVLAQGVLATGDQVDAIVDEKRRAAISLNHSATHLL 569
Query: 632 QAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKV 691
AAL+KV+G+ +Q GSLV + LRFDF+ + E++E+ERL+N I + ++T +
Sbjct: 570 HAALRKVLGEHVAQKGSLVRAETLRFDFSHLEAMTPAEIKEVERLVNQEIRHNHNIETNI 629
Query: 692 MALDDAKRAGAIAMFGEKYGEQVKISS 718
M +D+AK GA+A+FGEKY +QV++ S
Sbjct: 630 MNIDEAKAKGAMALFGEKYDDQVRVLS 656
>gi|432675782|ref|ZP_19911237.1| alanyl-tRNA synthetase [Escherichia coli KTE142]
gi|431212957|gb|ELF10876.1| alanyl-tRNA synthetase [Escherichia coli KTE142]
Length = 876
Score = 577 bits (1488), Expect = e-162, Method: Compositional matrix adjust.
Identities = 316/689 (45%), Positives = 437/689 (63%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +I+ +++ + D +N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRTLIQAVAKVTGAT-----DLSNKSLRVIADHIRSCAFLIADGVMP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K F + I++ D+K ++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAKE--------TFFYKLVGPLIDVMGSAGEDLKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGFGADYNAM-IRVDSA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD L V +L V+GK V ++ G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G N AV + + +++G H G + G L+VG V+A VD R R +++H+ATH
Sbjct: 513 KGANFSFAVEDTQKYGQAIG----HIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G SQ GSLV LRFDF+ + + E+ +E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M L+ AK GA+A+FGEKY E+V++ S
Sbjct: 629 NIMDLEAAKAKGAMALFGEKYDERVRVLS 657
>gi|222157385|ref|YP_002557524.1| alanyl-tRNA synthetase [Escherichia coli LF82]
gi|331674208|ref|ZP_08374968.1| alanine--tRNA ligase [Escherichia coli TA280]
gi|387617964|ref|YP_006120986.1| alanyl-tRNA synthetase [Escherichia coli O83:H1 str. NRG 857C]
gi|422828071|ref|ZP_16876243.1| alanyl-tRNA synthetase [Escherichia coli B093]
gi|432603350|ref|ZP_19839592.1| alanyl-tRNA synthetase [Escherichia coli KTE66]
gi|432681300|ref|ZP_19916670.1| alanyl-tRNA synthetase [Escherichia coli KTE143]
gi|222034390|emb|CAP77132.1| alanyl-tRNA synthetase [Escherichia coli LF82]
gi|312947225|gb|ADR28052.1| alanyl-tRNA synthetase [Escherichia coli O83:H1 str. NRG 857C]
gi|331068302|gb|EGI39697.1| alanine--tRNA ligase [Escherichia coli TA280]
gi|371615511|gb|EHO03910.1| alanyl-tRNA synthetase [Escherichia coli B093]
gi|431139709|gb|ELE41487.1| alanyl-tRNA synthetase [Escherichia coli KTE66]
gi|431219499|gb|ELF16910.1| alanyl-tRNA synthetase [Escherichia coli KTE143]
Length = 876
Score = 577 bits (1488), Expect = e-162, Method: Compositional matrix adjust.
Identities = 316/689 (45%), Positives = 437/689 (63%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +I+ +++ + D +N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRTLIQAVAKVTGAT-----DLSNKSLRVIADHIRSCAFLIADGVMP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K F + I++ D+K ++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAKE--------TFFYKLVGPLIDVMGSAGEDLKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGFGADYNAM-IRVDSA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD L V +L V+GK V ++ G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G N AV + + +++G H G + G L+VG V+A VD R R +++H+ATH
Sbjct: 513 KGANFSFAVEDTQKYGQAIG----HIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G SQ GSLV LRFDF+ + + E+ +E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M L+ AK GA+A+FGEKY E+V++ S
Sbjct: 629 NIMDLEAAKAKGAMALFGEKYDERVRVLS 657
>gi|422780386|ref|ZP_16833171.1| alanyl-tRNA synthetase [Escherichia coli TW10509]
gi|323978695|gb|EGB73777.1| alanyl-tRNA synthetase [Escherichia coli TW10509]
Length = 876
Score = 577 bits (1488), Expect = e-162, Method: Compositional matrix adjust.
Identities = 316/689 (45%), Positives = 437/689 (63%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +I+ +++ + D +N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRTLIQAVAKVTGAT-----DLSNKSLRVIADHIRSCAFLIADGVMP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K F + I++ D+K ++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAKE--------TFFYKLVGPLIDVMGSAGEDLKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGFGADYNAM-IRVDSA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD L V +L V+GK V ++ G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G N AV + + +++G H G + G L+VG V+A VD R R +++H+ATH
Sbjct: 513 KGVNFSFAVEDTQKYGQAIG----HIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G SQ GSLV LRFDF+ + + E+ +E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M L+ AK GA+A+FGEKY E+V++ S
Sbjct: 629 NIMDLEAAKAKGAMALFGEKYDERVRVLS 657
>gi|422800604|ref|ZP_16849101.1| alanyl-tRNA synthetase [Escherichia coli M863]
gi|323966841|gb|EGB62270.1| alanyl-tRNA synthetase [Escherichia coli M863]
Length = 876
Score = 577 bits (1488), Expect = e-162, Method: Compositional matrix adjust.
Identities = 316/689 (45%), Positives = 437/689 (63%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +I+ +++ + D +N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRTLIQAVAKVTGAT-----DLSNKSLRVIADHIRSCAFLIADGVMP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K F + I++ D+K ++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAKE--------TFFYKLVGPLIDVMGSAGEDLKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGFGADYNAM-IRVDSA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD L V +L V+GK V ++ G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G N AV + + +++G H G + G L+VG V+A VD R R +++H+ATH
Sbjct: 513 KGVNFSFAVEDTQKYGQAIG----HIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G SQ GSLV LRFDF+ + + E+ +E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M L+ AK GA+A+FGEKY E+V++ S
Sbjct: 629 NIMDLEAAKAKGAMALFGEKYDERVRVLS 657
>gi|191171366|ref|ZP_03032915.1| alanyl-tRNA synthetase [Escherichia coli F11]
gi|190908300|gb|EDV67890.1| alanyl-tRNA synthetase [Escherichia coli F11]
Length = 876
Score = 577 bits (1488), Expect = e-162, Method: Compositional matrix adjust.
Identities = 316/689 (45%), Positives = 437/689 (63%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +I+ +++ + D +N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRTLIQAVAKVTGAT-----DLSNKSLRVIADHIRSCAFLIADGVMP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K F + I++ D+K ++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAKE--------TFFYKLVGPLIDVMGSAGEDLKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGFGADYNAM-IRVDSA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD L V +L V+GK V ++ G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G N AV + + +++G H G + G L+VG V+A VD R R +++H+ATH
Sbjct: 513 KGANFSFAVEDTQKYGQAIG----HIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G SQ GSLV LRFDF+ + + E+ +E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M L+ AK GA+A+FGEKY E+V++ S
Sbjct: 629 NIMDLEAAKAKGAMALFGEKYDERVRVLS 657
>gi|157162143|ref|YP_001459461.1| alanyl-tRNA synthetase [Escherichia coli HS]
gi|218690819|ref|YP_002399031.1| alanyl-tRNA synthetase [Escherichia coli ED1a]
gi|227888232|ref|ZP_04006037.1| alanyl-tRNA synthetase [Escherichia coli 83972]
gi|331658802|ref|ZP_08359744.1| alanine--tRNA ligase [Escherichia coli TA206]
gi|386630430|ref|YP_006150150.1| alanyl-tRNA synthetase [Escherichia coli str. 'clone D i2']
gi|386635350|ref|YP_006155069.1| alanyl-tRNA synthetase [Escherichia coli str. 'clone D i14']
gi|386640179|ref|YP_006106977.1| alanyl-tRNA synthetase [Escherichia coli ABU 83972]
gi|419920193|ref|ZP_14438319.1| alanyl-tRNA synthetase [Escherichia coli KD2]
gi|432366153|ref|ZP_19609272.1| alanyl-tRNA synthetase [Escherichia coli KTE10]
gi|432412821|ref|ZP_19655481.1| alanyl-tRNA synthetase [Escherichia coli KTE39]
gi|432432896|ref|ZP_19675321.1| alanyl-tRNA synthetase [Escherichia coli KTE187]
gi|432437378|ref|ZP_19679765.1| alanyl-tRNA synthetase [Escherichia coli KTE188]
gi|432457719|ref|ZP_19699899.1| alanyl-tRNA synthetase [Escherichia coli KTE201]
gi|432486447|ref|ZP_19728360.1| alanyl-tRNA synthetase [Escherichia coli KTE212]
gi|432496714|ref|ZP_19738509.1| alanyl-tRNA synthetase [Escherichia coli KTE214]
gi|432505458|ref|ZP_19747179.1| alanyl-tRNA synthetase [Escherichia coli KTE220]
gi|432524852|ref|ZP_19761977.1| alanyl-tRNA synthetase [Escherichia coli KTE230]
gi|432527460|ref|ZP_19764548.1| alanyl-tRNA synthetase [Escherichia coli KTE233]
gi|432554714|ref|ZP_19791433.1| alanyl-tRNA synthetase [Escherichia coli KTE47]
gi|432569740|ref|ZP_19806249.1| alanyl-tRNA synthetase [Escherichia coli KTE53]
gi|432582227|ref|ZP_19818641.1| alanyl-tRNA synthetase [Escherichia coli KTE57]
gi|432593873|ref|ZP_19830186.1| alanyl-tRNA synthetase [Escherichia coli KTE60]
gi|432608540|ref|ZP_19844723.1| alanyl-tRNA synthetase [Escherichia coli KTE67]
gi|432652181|ref|ZP_19887932.1| alanyl-tRNA synthetase [Escherichia coli KTE87]
gi|432671768|ref|ZP_19907295.1| alanyl-tRNA synthetase [Escherichia coli KTE119]
gi|432733438|ref|ZP_19968264.1| alanyl-tRNA synthetase [Escherichia coli KTE45]
gi|432751108|ref|ZP_19985708.1| alanyl-tRNA synthetase [Escherichia coli KTE29]
gi|432760524|ref|ZP_19995015.1| alanyl-tRNA synthetase [Escherichia coli KTE46]
gi|432784571|ref|ZP_20018749.1| alanyl-tRNA synthetase [Escherichia coli KTE63]
gi|432845673|ref|ZP_20078407.1| alanyl-tRNA synthetase [Escherichia coli KTE141]
gi|432853822|ref|ZP_20082367.1| alanyl-tRNA synthetase [Escherichia coli KTE144]
gi|432899801|ref|ZP_20110311.1| alanyl-tRNA synthetase [Escherichia coli KTE192]
gi|432974808|ref|ZP_20163643.1| alanyl-tRNA synthetase [Escherichia coli KTE209]
gi|432996363|ref|ZP_20184947.1| alanyl-tRNA synthetase [Escherichia coli KTE218]
gi|433000934|ref|ZP_20189456.1| alanyl-tRNA synthetase [Escherichia coli KTE223]
gi|433029584|ref|ZP_20217438.1| alanyl-tRNA synthetase [Escherichia coli KTE109]
gi|433059142|ref|ZP_20246182.1| alanyl-tRNA synthetase [Escherichia coli KTE124]
gi|433088341|ref|ZP_20274708.1| alanyl-tRNA synthetase [Escherichia coli KTE137]
gi|433116546|ref|ZP_20302333.1| alanyl-tRNA synthetase [Escherichia coli KTE153]
gi|433121223|ref|ZP_20306889.1| alanyl-tRNA synthetase [Escherichia coli KTE157]
gi|433126216|ref|ZP_20311769.1| alanyl-tRNA synthetase [Escherichia coli KTE160]
gi|433140284|ref|ZP_20325535.1| alanyl-tRNA synthetase [Escherichia coli KTE167]
gi|433150203|ref|ZP_20335218.1| alanyl-tRNA synthetase [Escherichia coli KTE174]
gi|433174570|ref|ZP_20359087.1| alanyl-tRNA synthetase [Escherichia coli KTE232]
gi|433208780|ref|ZP_20392452.1| alanyl-tRNA synthetase [Escherichia coli KTE97]
gi|433213564|ref|ZP_20397152.1| alanyl-tRNA synthetase [Escherichia coli KTE99]
gi|442603568|ref|ZP_21018439.1| Alanyl-tRNA synthetase [Escherichia coli Nissle 1917]
gi|205830083|sp|A8A3H4.1|SYA_ECOHS RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|157067823|gb|ABV07078.1| alanyl-tRNA synthetase [Escherichia coli HS]
gi|218428383|emb|CAR09311.2| alanyl-tRNA synthetase [Escherichia coli ED1a]
gi|227834501|gb|EEJ44967.1| alanyl-tRNA synthetase [Escherichia coli 83972]
gi|307554671|gb|ADN47446.1| alanyl-tRNA synthetase [Escherichia coli ABU 83972]
gi|331053384|gb|EGI25413.1| alanine--tRNA ligase [Escherichia coli TA206]
gi|355421329|gb|AER85526.1| alanyl-tRNA synthetase [Escherichia coli str. 'clone D i2']
gi|355426249|gb|AER90445.1| alanyl-tRNA synthetase [Escherichia coli str. 'clone D i14']
gi|388385430|gb|EIL47113.1| alanyl-tRNA synthetase [Escherichia coli KD2]
gi|430892424|gb|ELC14915.1| alanyl-tRNA synthetase [Escherichia coli KTE10]
gi|430934281|gb|ELC54648.1| alanyl-tRNA synthetase [Escherichia coli KTE39]
gi|430951078|gb|ELC70298.1| alanyl-tRNA synthetase [Escherichia coli KTE187]
gi|430961551|gb|ELC79558.1| alanyl-tRNA synthetase [Escherichia coli KTE188]
gi|430981004|gb|ELC97744.1| alanyl-tRNA synthetase [Escherichia coli KTE201]
gi|431014970|gb|ELD28534.1| alanyl-tRNA synthetase [Escherichia coli KTE212]
gi|431022407|gb|ELD35668.1| alanyl-tRNA synthetase [Escherichia coli KTE214]
gi|431036974|gb|ELD47962.1| alanyl-tRNA synthetase [Escherichia coli KTE220]
gi|431050526|gb|ELD60271.1| alanyl-tRNA synthetase [Escherichia coli KTE230]
gi|431062276|gb|ELD71549.1| alanyl-tRNA synthetase [Escherichia coli KTE233]
gi|431082065|gb|ELD88379.1| alanyl-tRNA synthetase [Escherichia coli KTE47]
gi|431098832|gb|ELE04138.1| alanyl-tRNA synthetase [Escherichia coli KTE53]
gi|431122509|gb|ELE25378.1| alanyl-tRNA synthetase [Escherichia coli KTE57]
gi|431126275|gb|ELE28622.1| alanyl-tRNA synthetase [Escherichia coli KTE60]
gi|431136619|gb|ELE38475.1| alanyl-tRNA synthetase [Escherichia coli KTE67]
gi|431189281|gb|ELE88704.1| alanyl-tRNA synthetase [Escherichia coli KTE87]
gi|431209447|gb|ELF07554.1| alanyl-tRNA synthetase [Escherichia coli KTE119]
gi|431273204|gb|ELF64290.1| alanyl-tRNA synthetase [Escherichia coli KTE45]
gi|431295602|gb|ELF85339.1| alanyl-tRNA synthetase [Escherichia coli KTE29]
gi|431306764|gb|ELF95069.1| alanyl-tRNA synthetase [Escherichia coli KTE46]
gi|431327728|gb|ELG15048.1| alanyl-tRNA synthetase [Escherichia coli KTE63]
gi|431393849|gb|ELG77395.1| alanyl-tRNA synthetase [Escherichia coli KTE141]
gi|431398237|gb|ELG81657.1| alanyl-tRNA synthetase [Escherichia coli KTE144]
gi|431424941|gb|ELH07016.1| alanyl-tRNA synthetase [Escherichia coli KTE192]
gi|431486874|gb|ELH66519.1| alanyl-tRNA synthetase [Escherichia coli KTE209]
gi|431503907|gb|ELH82639.1| alanyl-tRNA synthetase [Escherichia coli KTE218]
gi|431507444|gb|ELH85729.1| alanyl-tRNA synthetase [Escherichia coli KTE223]
gi|431542133|gb|ELI17372.1| alanyl-tRNA synthetase [Escherichia coli KTE109]
gi|431567784|gb|ELI40776.1| alanyl-tRNA synthetase [Escherichia coli KTE124]
gi|431603357|gb|ELI72782.1| alanyl-tRNA synthetase [Escherichia coli KTE137]
gi|431632562|gb|ELJ00849.1| alanyl-tRNA synthetase [Escherichia coli KTE153]
gi|431641056|gb|ELJ08800.1| alanyl-tRNA synthetase [Escherichia coli KTE157]
gi|431642967|gb|ELJ10671.1| alanyl-tRNA synthetase [Escherichia coli KTE160]
gi|431658631|gb|ELJ25542.1| alanyl-tRNA synthetase [Escherichia coli KTE167]
gi|431669435|gb|ELJ35858.1| alanyl-tRNA synthetase [Escherichia coli KTE174]
gi|431690632|gb|ELJ56108.1| alanyl-tRNA synthetase [Escherichia coli KTE232]
gi|431729228|gb|ELJ92863.1| alanyl-tRNA synthetase [Escherichia coli KTE97]
gi|431733477|gb|ELJ96912.1| alanyl-tRNA synthetase [Escherichia coli KTE99]
gi|441715613|emb|CCQ04416.1| Alanyl-tRNA synthetase [Escherichia coli Nissle 1917]
Length = 876
Score = 577 bits (1488), Expect = e-162, Method: Compositional matrix adjust.
Identities = 316/689 (45%), Positives = 437/689 (63%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +I+ +++ + D +N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRTLIQAVAKVTGAT-----DLSNKSLRVIADHIRSCAFLIADGVMP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K F + I++ D+K ++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAKE--------TFFYKLVGPLIDVMGSAGEDLKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGFGADYNAM-IRVDSA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD L V +L V+GK V ++ G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G N AV + + +++G H G + G L+VG V+A VD R R +++H+ATH
Sbjct: 513 KGANFSFAVEDTQKYGQAIG----HIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G SQ GSLV LRFDF+ + + E+ +E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M L+ AK GA+A+FGEKY E+V++ S
Sbjct: 629 NIMDLEAAKAKGAMALFGEKYDERVRVLS 657
>gi|170765841|ref|ZP_02900652.1| alanyl-tRNA synthetase [Escherichia albertii TW07627]
gi|170124987|gb|EDS93918.1| alanyl-tRNA synthetase [Escherichia albertii TW07627]
Length = 876
Score = 577 bits (1488), Expect = e-162, Method: Compositional matrix adjust.
Identities = 320/690 (46%), Positives = 439/690 (63%), Gaps = 64/690 (9%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E FGLP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFGLPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +I+ +++ + D +N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRTLIQAVAKVTGAT-----DLSNKSLRVIADHIRSCAFLIADGVMP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K F + I++ D+K R+
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAKE--------TFFYKLVGPLIDVMGSAGEDLK-RQ 352
Query: 396 QRILEE-LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGF 454
Q ++E+ LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GF
Sbjct: 353 QALVEQVLKTEEEQFARTLERGLALLDEELAKLSGDT--------LDGETAFRLYDTYGF 404
Query: 455 PVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAEKIP 508
PV++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 405 PVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGFGADYNAM-IRVDSA-------- 455
Query: 509 DTEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYV 568
+EF GYD L V +L V+GK V ++ G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 -SEFKGYDHLELSGKVTALFVDGKAVDVINAGQEAVVVLDQTPFYAESGGQVGDKGEL-- 512
Query: 569 TQGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTAT 628
+G N AV + + +++G H G + G L VG V+A VD R R +++H+AT
Sbjct: 513 -KGANFSFAVEDTQKYGQAIG----HIGKLAAGSLNVGDAVQADVDEARRARIRLNHSAT 567
Query: 629 HLLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQ 688
HL+ AAL++V+G SQ GSLV LRFDF+ + + E+ +E L+N I ++
Sbjct: 568 HLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNLPIE 627
Query: 689 TKVMALDDAKRAGAIAMFGEKYGEQVKISS 718
T +M L+ AK GA+A+FGEKY E+V++ S
Sbjct: 628 TNIMDLEAAKAKGAMALFGEKYDERVRVLS 657
>gi|82778066|ref|YP_404415.1| alanyl-tRNA synthetase [Shigella dysenteriae Sd197]
gi|123561812|sp|Q32CN1.1|SYA_SHIDS RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|81242214|gb|ABB62924.1| alanyl-tRNA synthetase [Shigella dysenteriae Sd197]
Length = 876
Score = 577 bits (1488), Expect = e-162, Method: Compositional matrix adjust.
Identities = 316/689 (45%), Positives = 436/689 (63%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +I+ +++ + D +N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRTLIQAVAKVTGAT-----DLSNKSLRVIADHIRSCAFLIADGVMP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K F + I++ D+K ++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAKE--------TFFYKLVGPLIDVMGSAGEDLKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGFGADYNAM-IRVDSA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD L V +L V+GK V ++ G D V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDHLELNGKVTALFVDGKAVDAINAGQDAVVVLDQTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G N V + + +++G H G + G L+VG V+A VD R R +++H+ATH
Sbjct: 513 KGANFSFVVEDTQKYGQAIG----HIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G SQ GSLV LRFDF+ + + E+ +E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M L+ AK GA+A+FGEKY E+V++ S
Sbjct: 629 NIMDLEAAKAKGAMALFGEKYDERVRVLS 657
>gi|293412052|ref|ZP_06654775.1| alanyl-tRNA synthetase [Escherichia coli B354]
gi|432870126|ref|ZP_20090583.1| alanyl-tRNA synthetase [Escherichia coli KTE147]
gi|291468823|gb|EFF11314.1| alanyl-tRNA synthetase [Escherichia coli B354]
gi|431409096|gb|ELG92271.1| alanyl-tRNA synthetase [Escherichia coli KTE147]
Length = 876
Score = 577 bits (1488), Expect = e-162, Method: Compositional matrix adjust.
Identities = 316/689 (45%), Positives = 437/689 (63%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +I+ +++ + D +N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRTLIQAVAKVTGAT-----DLSNKSLRVIADHIRSCAFLIADGVMP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K F + I++ D+K ++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAKE--------TFFYKLVGPLIDVMGSAGEDLKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGFGADYNAM-IRVDSA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD L V +L V+GK V ++ G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G N AV + + +++G H G + G L+VG V+A VD R R +++H+ATH
Sbjct: 513 KGANFSFAVEDTQKYGQAIG----HIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G SQ GSLV LRFDF+ + + E+ +E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M L+ AK GA+A+FGEKY E+V++ S
Sbjct: 629 NIMDLEAAKAKGAMALFGEKYDERVRVLS 657
>gi|157364647|ref|YP_001471414.1| alanyl-tRNA synthetase [Thermotoga lettingae TMO]
gi|205830273|sp|A8F866.1|SYA_THELT RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|157315251|gb|ABV34350.1| alanyl-tRNA synthetase [Thermotoga lettingae TMO]
Length = 858
Score = 577 bits (1488), Expect = e-162, Method: Compositional matrix adjust.
Identities = 307/674 (45%), Positives = 434/674 (64%), Gaps = 40/674 (5%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
+GD +R FL F+ +GHK+LPSASL+P+DP +L T+AGM+ FKPIF GKV R T
Sbjct: 2 TGDELRSAFLRFFEKKGHKILPSASLIPDDPQLLFTVAGMVPFKPIFWGKVEPVYTRVTT 61
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
Q+C+RTND+ENVGRT RH TFFEMLGNFSFGDYFKKEAI WAWEF T L +RLWI
Sbjct: 62 CQKCLRTNDIENVGRTPRHQTFFEMLGNFSFGDYFKKEAIIWAWEFVTEVLKLEKDRLWI 121
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWN-SGATGPCGPCSEIYYDFHPDRGCS 227
+VYE+D+E+F+IW VGV + I RMG D NFW +G TGPCGPCSEI+YD + CS
Sbjct: 122 TVYEEDEESFKIWKDIVGVCEKKIIRMGKDTNFWGPAGPTGPCGPCSEIHYDTGLNEDCS 181
Query: 228 DVDL---GDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNY 284
D + D RF+E +NLVF ++ + + G+L PL +KNIDTG GLER+A ++QKV +N+
Sbjct: 182 DGECTPANSDKRFLEIWNLVFTEFYQDEKGALYPLPRKNIDTGAGLERVASVVQKVESNF 241
Query: 285 ETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVV 344
ETD+ PII K ++ V Y + +++ ++++++I DH RA+ +L++DGVFPSN RGYV+
Sbjct: 242 ETDIFKPIISKIEDVLGVEY-KKDEQKDISIRVIADHSRAVSFLIADGVFPSNEERGYVL 300
Query: 345 RRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKR 404
RR++RRAVR G LLG + FL I E IE + S++K R+ ILE +
Sbjct: 301 RRILRRAVRHGVLLG--------AQKPFLHLINETVIEHMGNTYSELKNRKDLILEVTRA 352
Query: 405 EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAE 464
EE RF +T+ +G ++ML D +SR+ + + G+D F LYDT+GFP +I +VA+
Sbjct: 353 EEERFFKTISQG----NEMLRDIISRSSKV-----IDGEDVFKLYDTYGFPPDIVVDVAK 403
Query: 465 EHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSA--DLAEKIPDTEFLGYDTLSAKA 522
++ + VD++GF+ M+ QR ++++A N V+ + +LA+K T F+GYDTL +A
Sbjct: 404 DYNLKVDLEGFEKLMKIQRERARSARNNVEYAKSQEIYDELAQK-SKTVFVGYDTLECEA 462
Query: 523 IVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVK 582
K + G+ E + ++T FYAE GGQ+ D G + G+ V+
Sbjct: 463 ---------KVIFLKKSGTKYEAVFDKTSFYAERGGQVSDVGQIVWDGGS------ASVE 507
Query: 583 DVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQE 642
V + + VH + +G L+ G +V IVD + R +HTATHLL AAL+KV+G
Sbjct: 508 HVFIPVEGIIVHIINVEKGELKEGTKVRLIVDREKRLSTARNHTATHLLHAALRKVLGTH 567
Query: 643 TSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGA 702
QAGSLV ++LRFDF H+PL D EL IE ++N I + + T+ + +A GA
Sbjct: 568 VKQAGSLVTPEKLRFDFTHHKPLTDNELMSIENMVNEIILRSIPVITEEKSYKEAVAEGA 627
Query: 703 IAMFGEKYGEQVKI 716
IA+FGEKYG+ V++
Sbjct: 628 IALFGEKYGDVVRV 641
>gi|215488016|ref|YP_002330447.1| alanyl-tRNA synthetase [Escherichia coli O127:H6 str. E2348/69]
gi|417756934|ref|ZP_12405006.1| alanyl-tRNA synthetase [Escherichia coli DEC2B]
gi|418997993|ref|ZP_13545584.1| alanyl-tRNA synthetase [Escherichia coli DEC1A]
gi|419003253|ref|ZP_13550773.1| alanyl-tRNA synthetase [Escherichia coli DEC1B]
gi|419009121|ref|ZP_13556545.1| alanyl-tRNA synthetase [Escherichia coli DEC1C]
gi|419014603|ref|ZP_13561949.1| alanyl-tRNA synthetase [Escherichia coli DEC1D]
gi|419025475|ref|ZP_13572695.1| alanyl-tRNA synthetase [Escherichia coli DEC2A]
gi|419030173|ref|ZP_13577330.1| alanyl-tRNA synthetase [Escherichia coli DEC2C]
gi|419035787|ref|ZP_13582871.1| alanyl-tRNA synthetase [Escherichia coli DEC2D]
gi|419040862|ref|ZP_13587886.1| alanyl-tRNA synthetase [Escherichia coli DEC2E]
gi|432544295|ref|ZP_19781135.1| alanyl-tRNA synthetase [Escherichia coli KTE236]
gi|432549785|ref|ZP_19786550.1| alanyl-tRNA synthetase [Escherichia coli KTE237]
gi|432622887|ref|ZP_19858913.1| alanyl-tRNA synthetase [Escherichia coli KTE76]
gi|432719802|ref|ZP_19954768.1| alanyl-tRNA synthetase [Escherichia coli KTE9]
gi|432816382|ref|ZP_20050163.1| alanyl-tRNA synthetase [Escherichia coli KTE115]
gi|215266088|emb|CAS10508.1| alanyl-tRNA synthetase [Escherichia coli O127:H6 str. E2348/69]
gi|377842476|gb|EHU07530.1| alanyl-tRNA synthetase [Escherichia coli DEC1C]
gi|377842678|gb|EHU07728.1| alanyl-tRNA synthetase [Escherichia coli DEC1A]
gi|377846017|gb|EHU11033.1| alanyl-tRNA synthetase [Escherichia coli DEC1B]
gi|377855848|gb|EHU20712.1| alanyl-tRNA synthetase [Escherichia coli DEC1D]
gi|377861163|gb|EHU25983.1| alanyl-tRNA synthetase [Escherichia coli DEC2A]
gi|377872649|gb|EHU37292.1| alanyl-tRNA synthetase [Escherichia coli DEC2B]
gi|377876425|gb|EHU41030.1| alanyl-tRNA synthetase [Escherichia coli DEC2C]
gi|377878789|gb|EHU43372.1| alanyl-tRNA synthetase [Escherichia coli DEC2D]
gi|377889174|gb|EHU53641.1| alanyl-tRNA synthetase [Escherichia coli DEC2E]
gi|431073230|gb|ELD80881.1| alanyl-tRNA synthetase [Escherichia coli KTE236]
gi|431078953|gb|ELD85932.1| alanyl-tRNA synthetase [Escherichia coli KTE237]
gi|431157915|gb|ELE58537.1| alanyl-tRNA synthetase [Escherichia coli KTE76]
gi|431261305|gb|ELF53344.1| alanyl-tRNA synthetase [Escherichia coli KTE9]
gi|431363262|gb|ELG49831.1| alanyl-tRNA synthetase [Escherichia coli KTE115]
Length = 876
Score = 577 bits (1488), Expect = e-162, Method: Compositional matrix adjust.
Identities = 316/689 (45%), Positives = 437/689 (63%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +I+ +++ + D +N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRTLIQAVAKVTGAT-----DLSNKSLRVIADHIRSCAFLIADGVMP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K F + I++ D+K ++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAKE--------TFFYKLVGPLIDVMGSAGEDLKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGFGADYNAM-IRVDSA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD L V +L V+GK V ++ G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G N AV + + +++G H G + G L+VG V+A VD R R +++H+ATH
Sbjct: 513 KGANFSFAVEDTQKYGQAIG----HIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G SQ GSLV LRFDF+ + + E+ +E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M L+ AK GA+A+FGEKY E+V++ S
Sbjct: 629 NIMDLEAAKAKGAMALFGEKYDERVRVLS 657
>gi|422807902|ref|ZP_16856330.1| alanyl-tRNA synthetase [Escherichia fergusonii B253]
gi|324111325|gb|EGC05307.1| alanyl-tRNA synthetase [Escherichia fergusonii B253]
Length = 876
Score = 577 bits (1488), Expect = e-162, Method: Compositional matrix adjust.
Identities = 316/689 (45%), Positives = 437/689 (63%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +I+ +++ + D +N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRTLIQAVAKVTGAT-----DLSNKSLRVIADHIRSCAFLIADGVMP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K F + I++ D+K ++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAKE--------TFFYKLVGPLIDVMGSAGEDLKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGFGADYNAM-IRVDSA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD L V +L V+GK V ++ G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDHLELSGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G N AV + + +++G H G + G L+VG V+A VD R R +++H+ATH
Sbjct: 513 KGANFSFAVEDTQKYGQAIG----HIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G SQ GSLV LRFDF+ + + E+ +E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M L+ AK GA+A+FGEKY E+V++ S
Sbjct: 629 NIMDLEAAKAKGAMALFGEKYDERVRVLS 657
>gi|224584605|ref|YP_002638403.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Paratyphi C strain RKS4594]
gi|224469132|gb|ACN46962.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Paratyphi C strain RKS4594]
Length = 876
Score = 577 bits (1488), Expect = e-162, Method: Compositional matrix adjust.
Identities = 317/689 (46%), Positives = 435/689 (63%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWFALPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGAMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +I+ +++ + D N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRTLIEAVAKVTGAT-----DLGNKSLRVIADHIRSCAFLVADGVLP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K F + IE+ ++K ++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAKE--------TFFYKLVGPLIEVMGSAGEELKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLQGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGFGADYNAM-IRVDSA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD L V +L V+GK V ++ G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDHLELNGKVTALFVDGKAVEVINAGQEAVVVLDQTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G AV D + G H G + G L+VG V+A VD R R +++H+ATH
Sbjct: 513 KGAGFTFAV----DATQKYGQAIGHLGKLSAGALKVGDAVQADVDEARRARIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G +Q GSLV+ LRFDF+ + + +E+ E+E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVAQKGSLVSDKVLRFDFSHNEAMKPSEIREVEDLVNAQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M LD AK GA+A+FGEKY E+V++ S
Sbjct: 629 NIMDLDAAKAKGAMALFGEKYDERVRVLS 657
>gi|110642817|ref|YP_670547.1| alanyl-tRNA synthetase [Escherichia coli 536]
gi|432471983|ref|ZP_19714024.1| alanyl-tRNA synthetase [Escherichia coli KTE206]
gi|432714389|ref|ZP_19949423.1| alanyl-tRNA synthetase [Escherichia coli KTE8]
gi|433078829|ref|ZP_20265354.1| alanyl-tRNA synthetase [Escherichia coli KTE131]
gi|123147797|sp|Q0TEI3.1|SYA_ECOL5 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|110344409|gb|ABG70646.1| alanyl-tRNA synthetase [Escherichia coli 536]
gi|430996930|gb|ELD13200.1| alanyl-tRNA synthetase [Escherichia coli KTE206]
gi|431255106|gb|ELF48362.1| alanyl-tRNA synthetase [Escherichia coli KTE8]
gi|431595464|gb|ELI65461.1| alanyl-tRNA synthetase [Escherichia coli KTE131]
Length = 876
Score = 577 bits (1488), Expect = e-162, Method: Compositional matrix adjust.
Identities = 316/689 (45%), Positives = 437/689 (63%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +I+ +++ + D +N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRTLIQAVAKVTGAT-----DLSNKSLRVIADHIRSCAFLIADGVMP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K F + I++ D+K ++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAKE--------TFFYKLVGPLIDVMGSAGEDLKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGFGADYNAM-IRVDSA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD L V +L V+GK V ++ G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G N AV + + +++G H G + G L+VG V+A VD R R +++H+ATH
Sbjct: 513 KGANFSFAVEDTQKYGQAIG----HIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G SQ GSLV LRFDF+ + + E+ +E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M L+ AK GA+A+FGEKY E+V++ S
Sbjct: 629 NIMDLEAAKAKGAMALFGEKYDERVRVLS 657
>gi|258511993|ref|YP_003185427.1| alanyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
gi|257478719|gb|ACV59038.1| alanyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 879
Score = 577 bits (1488), Expect = e-162, Method: Compositional matrix adjust.
Identities = 317/674 (47%), Positives = 425/674 (63%), Gaps = 30/674 (4%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
+G IR+ F F+A RGH VLPS LVP +DPT+L AGM KP F G+ +VPR
Sbjct: 5 TGQEIRRAFKQFFAERGHMVLPSFPLVPKDDPTLLWINAGMAPLKPYFDGREIPEVPRIV 64
Query: 108 TSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
+Q+CIRTND+E VG T+RH TFFEMLGNFSFGDYFK EAI WAWEF T L R+
Sbjct: 65 DAQKCIRTNDIEEVGHTARHQTFFEMLGNFSFGDYFKLEAITWAWEFLTQVLELDPERIS 124
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCS 227
++++EDDDEAFE+W+ VG+P I R G +DNFW G GPCGPCSEI+YD GC
Sbjct: 125 VTIHEDDDEAFEVWHHRVGLPASRIYR-GKEDNFWEIG-EGPCGPCSEIFYDRGEAYGCG 182
Query: 228 DVDL---GDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNY 284
D D RF+E +NLVF Q+NK DGS PL +KNIDTG GLER+A ILQ VPNN+
Sbjct: 183 SPDCKPGCDCDRFLEIWNLVFTQFNKNADGSYSPLPKKNIDTGSGLERLASILQDVPNNF 242
Query: 285 ETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVV 344
ETDL PII +A+EL+ Y +S + +++LKII DH+R + + + DGV PSN GRGYV+
Sbjct: 243 ETDLFRPIINRAAELSGRPYGRSAE-DDVHLKIIADHVRTVTFAIGDGVLPSNEGRGYVI 301
Query: 345 RRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEE--L 402
RRL+RRAVR+GR LG+ E FL + A+ D + RE+R L E +
Sbjct: 302 RRLLRRAVRSGRKLGV--------ERPFLYELV--AVVDRIMGDDYPEVREKRSLIERVV 351
Query: 403 KREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEV 462
+ EE RF+QTL GE+LL++ + + +R LSG+ AF LYDT+GFP+++T E+
Sbjct: 352 RTEEERFLQTLAAGEELLNRTIEEVKARGETV-----LSGEAAFRLYDTYGFPIDLTVEI 406
Query: 463 AEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTLSAKA 522
A E G++VD +GF+ E+E QR +++ A + L + F+GYD L+ A
Sbjct: 407 AREKGIAVDREGFERELEEQRARAREARQVAEGMQSQRGALETFTEPSRFVGYDELTVDA 466
Query: 523 IVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVK 582
+ L +G V ++ G + +V+L+ TPFYAESGGQ+GD G + G EV
Sbjct: 467 TIIGLFQDGDRVDGLAIGEEGQVILDVTPFYAESGGQVGDRGEIVGANGK------AEVL 520
Query: 583 DVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQE 642
DV+K+ V + + +G L G V A VD R+ +HTATHLL AL+ V+G
Sbjct: 521 DVQKAPHGQHVMRVRVVDGSLLQGDSVRAHVDEDFRRDIVKNHTATHLLHKALRDVLGTH 580
Query: 643 TSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGA 702
+QAGSLV +RLRFDF+ PL D EL E+ER +N I + + + M LD+AK GA
Sbjct: 581 VAQAGSLVEPERLRFDFSHFGPLTDEELAEVERRVNDEIWRDHAVHIREMDLDEAKAMGA 640
Query: 703 IAMFGEKYGEQVKI 716
+A+FGEKYG++V++
Sbjct: 641 MALFGEKYGQRVRV 654
>gi|254448289|ref|ZP_05061751.1| alanyl-tRNA synthetase [gamma proteobacterium HTCC5015]
gi|198262156|gb|EDY86439.1| alanyl-tRNA synthetase [gamma proteobacterium HTCC5015]
Length = 868
Score = 577 bits (1488), Expect = e-162, Method: Compositional matrix adjust.
Identities = 305/679 (44%), Positives = 444/679 (65%), Gaps = 43/679 (6%)
Query: 48 SSGDSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRA 106
+S +IRK+FLD++AS+GH V+PS+SLVP D T+L T AGM+ FK +FLG+ R RA
Sbjct: 2 TSSANIRKQFLDYFASKGHAVVPSSSLVPAGDDTLLFTNAGMVPFKHVFLGQEQRDYNRA 61
Query: 107 ATSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLP 162
+SQRC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI + WEF T GLP
Sbjct: 62 TSSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAIHYGWEFLTQVVGLP 121
Query: 163 ANRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDF-- 220
+LW++V+E+DDEA +IW KE+GV + + R+GA DNFW G TGPCGPC+EI+YD
Sbjct: 122 KEKLWVTVFEEDDEAADIWLKEIGVDPDRLSRIGAKDNFWQMGDTGPCGPCTEIFYDHGE 181
Query: 221 HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKV 280
H G D R+IE +NLVFMQYN+ DG+L PL + ++DTG+GLER+A ILQ V
Sbjct: 182 HIWGGPPGTPEEDGDRYIEVWNLVFMQYNRSQDGTLTPLPKPSVDTGMGLERLAAILQGV 241
Query: 281 PNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGR 340
+NYE DL +I A + V S++ ++LN +I DH+R+ +L+ DGV PSN GR
Sbjct: 242 HSNYEIDLFQALIHAAGKAVGVE-KPSHEISSLN--VIADHIRSCAFLVVDGVLPSNEGR 298
Query: 341 GYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILE 400
GYV+RR+IRRA R G LG F ++ E+ + ++ + R+ +
Sbjct: 299 GYVLRRIIRRACRHGYKLGQN--------QPFFYTLVEELVAQMGEAYPELSESQARVEQ 350
Query: 401 ELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITK 460
LK+EE RF +TL +G +L+Q + D+L R+ G+ F LYDT+GFPV++T
Sbjct: 351 VLKKEEERFAETLSQGMGILNQAI-DSLDG-------ERIPGETVFQLYDTYGFPVDLTA 402
Query: 461 EVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKI---PDTEFLGYDT 517
++A EH + +D++G++ ME QR++++AA ADL+E+I ++EF GY+
Sbjct: 403 DIAREHELDIDLEGYEACMEEQRQRARAASQF-------GADLSERIEFSEESEFTGYEH 455
Query: 518 LSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTA 577
L+ +A++ L+V+G V ++++G V+LN TPFYAESGGQ+GD G L V++G
Sbjct: 456 LNHEAVISHLIVDGSEVERIAEGQQGMVVLNSTPFYAESGGQVGDRGVL-VSEGVR---- 510
Query: 578 VVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKK 637
V D +K G++ VH G + G L + + A VD R+ +++H+ATHL+ AL++
Sbjct: 511 -FRVDDTQKQGGAI-VHIGHLECGELSLNDNILAEVDMAKRRATELNHSATHLMHWALRE 568
Query: 638 VIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDA 697
V+G Q GSLV + LRFDF+ +P+ D+EL ++E L+N I QT++M ++DA
Sbjct: 569 VLGDHVQQKGSLVNEEYLRFDFSHFQPMTDSELAQVEDLVNAEILKNRATQTRLMTMEDA 628
Query: 698 KRAGAIAMFGEKYGEQVKI 716
K AGA+A+FGEKYG++V++
Sbjct: 629 KAAGAMALFGEKYGDEVRV 647
>gi|432793848|ref|ZP_20027930.1| alanyl-tRNA synthetase [Escherichia coli KTE78]
gi|432795347|ref|ZP_20029408.1| alanyl-tRNA synthetase [Escherichia coli KTE79]
gi|431337918|gb|ELG25005.1| alanyl-tRNA synthetase [Escherichia coli KTE78]
gi|431350828|gb|ELG37633.1| alanyl-tRNA synthetase [Escherichia coli KTE79]
Length = 876
Score = 577 bits (1488), Expect = e-162, Method: Compositional matrix adjust.
Identities = 316/689 (45%), Positives = 437/689 (63%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +I+ +++ + D +N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRTLIQAVAKVTGAT-----DLSNKSLRVIADHIRSCAFLIADGVMP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K F + I++ D+K ++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAKE--------TFFYKLVGPLIDVMGSAGEDLKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGFGADYNAM-IRVDSA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD L V +L V+GK V ++ G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G N AV + + +++G H G + G L+VG V+A VD R R +++H+ATH
Sbjct: 513 KGANFSFAVEDTQKYGQAIG----HIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G SQ GSLV LRFDF+ + + E+ +E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M L+ AK GA+A+FGEKY E+V++ S
Sbjct: 629 NIMDLEAAKAKGAMALFGEKYDERVRVLS 657
>gi|417812515|ref|ZP_12459175.1| alanyl-tRNA synthetase [Vibrio cholerae HC-49A2]
gi|418354358|ref|ZP_12957082.1| alanyl-tRNA synthetase [Vibrio cholerae HC-61A1]
gi|421319318|ref|ZP_15769877.1| alanyl-tRNA synthetase [Vibrio cholerae CP1038(11)]
gi|421334360|ref|ZP_15784829.1| alanyl-tRNA synthetase [Vibrio cholerae CP1048(21)]
gi|423159217|ref|ZP_17146190.1| alanyl-tRNA synthetase [Vibrio cholerae HC-33A2]
gi|443530458|ref|ZP_21096474.1| alanyl-tRNA synthetase [Vibrio cholerae HC-7A1]
gi|443534234|ref|ZP_21100148.1| alanyl-tRNA synthetase [Vibrio cholerae HC-80A1]
gi|340043895|gb|EGR04852.1| alanyl-tRNA synthetase [Vibrio cholerae HC-49A2]
gi|356450344|gb|EHI03073.1| alanyl-tRNA synthetase [Vibrio cholerae HC-33A2]
gi|356454134|gb|EHI06789.1| alanyl-tRNA synthetase [Vibrio cholerae HC-61A1]
gi|395925643|gb|EJH36440.1| alanyl-tRNA synthetase [Vibrio cholerae CP1038(11)]
gi|395937469|gb|EJH48183.1| alanyl-tRNA synthetase [Vibrio cholerae CP1048(21)]
gi|443458659|gb|ELT26054.1| alanyl-tRNA synthetase [Vibrio cholerae HC-7A1]
gi|443462541|gb|ELT33578.1| alanyl-tRNA synthetase [Vibrio cholerae HC-80A1]
Length = 858
Score = 577 bits (1487), Expect = e-162, Method: Compositional matrix adjust.
Identities = 315/687 (45%), Positives = 435/687 (63%), Gaps = 51/687 (7%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S D +R+ FL F+ S+GH+++ S+SLVP DPT+L T AGM QFK FLG R RA
Sbjct: 2 STDEVRRAFLSFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDCFLGLEKRAYTRAT 61
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
T+QRC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AIQ+AWEF T LP
Sbjct: 62 TAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIQYAWEFLTDVLQLPK 121
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG--------ADDNFWNSGATGPCGPCSE 215
RL ++VYE DDEAF+IWNK+VG+P + I R+G DNFW G TGPCGPC+E
Sbjct: 122 ERLLVTVYETDDEAFDIWNKKVGIPADRIIRIGDKKGGKKFDSDNFWQMGDTGPCGPCTE 181
Query: 216 IYYDFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLER 272
I+YD H D G D RFIE +N VFMQ+N+ DG++EPL + ++DTG+G+ER
Sbjct: 182 IFYD-HGDHIWGGPPGSPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPSVDTGMGIER 240
Query: 273 IARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDG 332
I+ I+Q V +NYE D+ +IK A++ + Y D TN +L+++ DH+R+ +L+ DG
Sbjct: 241 ISAIMQGVHSNYEIDVFQTLIKAAADA--IGY---QDLTNQSLRVVADHIRSCAFLIVDG 295
Query: 333 VFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVK 392
V PSN GRGYV+RR+IRRAVR G LG +G L G + +EL
Sbjct: 296 VMPSNEGRGYVLRRIIRRAVRHGNKLGAQGAFFHKLVGPLAEVMGTAGVELK-------- 347
Query: 393 AREQRILEELKR-EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDT 451
++Q ++E++ R EE F +TL+RG +L+ DAL + SG V L G+ F LYDT
Sbjct: 348 -KQQALVEKVLRIEEENFGRTLDRGMSILN----DALDQL--SGQV--LDGETVFKLYDT 398
Query: 452 FGFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTE 511
+GFP ++T +VA E G S+D GF+ ME QR Q A A + D ++ L + +TE
Sbjct: 399 YGFPADLTNDVARERGFSIDEAGFEQAMEEQR---QRAREAGQFGTDYNS-LIKSATNTE 454
Query: 512 FLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQG 571
F GY +++V + V G V +S G ++L+ TPFYAESGGQ GD G L G
Sbjct: 455 FCGYTASRGQSVVREMFVEGAEVSTLSAGDKAIIVLDNTPFYAESGGQCGDTGVLKTDAG 514
Query: 572 TNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLL 631
+ V+D +K LG+ H G I +GVL G +V+AIVD K R ++H+ATHLL
Sbjct: 515 ------IFHVEDTQK-LGNAIAHHGVIAQGVLATGDQVDAIVDEKRRAAISLNHSATHLL 567
Query: 632 QAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKV 691
AAL+KV+G+ +Q GSLV + LRFDF+ + E++E+ERL+N + + ++T +
Sbjct: 568 HAALRKVLGEHVAQKGSLVRAETLRFDFSHLEAMTAAEIKEVERLVNQEVRRNHSIETNI 627
Query: 692 MALDDAKRAGAIAMFGEKYGEQVKISS 718
M +D+AK GA+A+FGEKY +QV++ S
Sbjct: 628 MNIDEAKAKGAMALFGEKYDDQVRVLS 654
>gi|262149022|ref|ZP_06028166.1| alanyl-tRNA synthetase [Vibrio cholerae INDRE 91/1]
gi|262031167|gb|EEY49787.1| alanyl-tRNA synthetase [Vibrio cholerae INDRE 91/1]
Length = 873
Score = 577 bits (1487), Expect = e-162, Method: Compositional matrix adjust.
Identities = 315/687 (45%), Positives = 435/687 (63%), Gaps = 51/687 (7%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S D +R+ FL F+ S+GH+++ S+SLVP DPT+L T AGM QFK FLG R RA
Sbjct: 4 STDEVRRAFLSFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDCFLGLEKRAYTRAT 63
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
T+QRC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AIQ+AWEF T LP
Sbjct: 64 TAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIQYAWEFLTDVLQLPK 123
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG--------ADDNFWNSGATGPCGPCSE 215
RL ++VYE DDEAF+IWNK+VG+P + I R+G DNFW G TGPCGPC+E
Sbjct: 124 ERLLVTVYETDDEAFDIWNKKVGIPADRIIRIGDKKGGKKFDSDNFWQMGDTGPCGPCTE 183
Query: 216 IYYDFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLER 272
I+YD H D G D RFIE +N VFMQ+N+ DG++EPL + ++DTG+G+ER
Sbjct: 184 IFYD-HGDHIWGGPPGSPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPSVDTGMGIER 242
Query: 273 IARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDG 332
I+ I+Q V +NYE D+ +IK A++ + Y D TN +L+++ DH+R+ +L+ DG
Sbjct: 243 ISAIMQGVHSNYEIDVFQTLIKAAADA--IGY---QDLTNQSLRVVADHIRSCAFLIVDG 297
Query: 333 VFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVK 392
V PSN GRGYV+RR+IRRAVR G LG +G L G + +EL
Sbjct: 298 VMPSNEGRGYVLRRIIRRAVRHGNKLGAQGAFFHKLVGPLAEVMGTAGVELK-------- 349
Query: 393 AREQRILEELKR-EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDT 451
++Q ++E++ R EE F +TL+RG +L+ DAL + SG V L G+ F LYDT
Sbjct: 350 -KQQALVEKVLRIEEENFGRTLDRGMSILN----DALDQL--SGQV--LDGETVFKLYDT 400
Query: 452 FGFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTE 511
+GFP ++T +VA E G S+D GF+ ME QR Q A A + D ++ L + +TE
Sbjct: 401 YGFPADLTNDVARERGFSIDEAGFEQAMEEQR---QRAREAGQFGTDYNS-LIKSATNTE 456
Query: 512 FLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQG 571
F GY +++V + V G V +S G ++L+ TPFYAESGGQ GD G L G
Sbjct: 457 FCGYTASRGQSVVREMFVEGAEVSTLSAGDKAIIVLDNTPFYAESGGQCGDTGVLKTDAG 516
Query: 572 TNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLL 631
+ V+D +K LG+ H G I +GVL G +V+AIVD K R ++H+ATHLL
Sbjct: 517 ------IFHVEDTQK-LGNAIAHHGVIAQGVLATGDQVDAIVDEKRRAAISLNHSATHLL 569
Query: 632 QAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKV 691
AAL+KV+G+ +Q GSLV + LRFDF+ + E++E+ERL+N + + ++T +
Sbjct: 570 HAALRKVLGEHVAQKGSLVRAETLRFDFSHLEAMTAAEIKEVERLVNQEVRRNHSIETNI 629
Query: 692 MALDDAKRAGAIAMFGEKYGEQVKISS 718
M +D+AK GA+A+FGEKY +QV++ S
Sbjct: 630 MNIDEAKAKGAMALFGEKYDDQVRVLS 656
>gi|432398599|ref|ZP_19641377.1| alanyl-tRNA synthetase [Escherichia coli KTE25]
gi|432724119|ref|ZP_19959035.1| alanyl-tRNA synthetase [Escherichia coli KTE17]
gi|432728701|ref|ZP_19963577.1| alanyl-tRNA synthetase [Escherichia coli KTE18]
gi|432742385|ref|ZP_19977102.1| alanyl-tRNA synthetase [Escherichia coli KTE23]
gi|432991750|ref|ZP_20180413.1| alanyl-tRNA synthetase [Escherichia coli KTE217]
gi|433111885|ref|ZP_20297744.1| alanyl-tRNA synthetase [Escherichia coli KTE150]
gi|430914177|gb|ELC35280.1| alanyl-tRNA synthetase [Escherichia coli KTE25]
gi|431264373|gb|ELF56087.1| alanyl-tRNA synthetase [Escherichia coli KTE17]
gi|431272266|gb|ELF63373.1| alanyl-tRNA synthetase [Escherichia coli KTE18]
gi|431282618|gb|ELF73497.1| alanyl-tRNA synthetase [Escherichia coli KTE23]
gi|431493892|gb|ELH73483.1| alanyl-tRNA synthetase [Escherichia coli KTE217]
gi|431626921|gb|ELI95333.1| alanyl-tRNA synthetase [Escherichia coli KTE150]
Length = 876
Score = 577 bits (1487), Expect = e-162, Method: Compositional matrix adjust.
Identities = 316/689 (45%), Positives = 437/689 (63%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +I+ +++ + D +N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRTLIQAVAKVTGAT-----DLSNKSLRVIADHIRSCAFLIADGVMP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K F + I++ D+K ++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAKE--------TFFCKLVGPLIDVMGSAGEDLKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGFGADYNAM-IRVDSA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD L V +L V+GK V ++ G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDHLELNGKVTALFVDGKSVDAINAGQEAVVVLDQTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G N AV + + +++G H G + G L+VG V+A VD R R +++H+ATH
Sbjct: 513 KGANFSFAVEDTQKYGQAIG----HIGKLAVGSLKVGDAVQADVDEARRARIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G SQ GSLV LRFDF+ + + E+ +E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M L+ AK GA+A+FGEKY E+V++ S
Sbjct: 629 NIMDLEAAKAKGAMALFGEKYDERVRVLS 657
>gi|30064057|ref|NP_838228.1| alanyl-tRNA synthetase [Shigella flexneri 2a str. 2457T]
gi|56480163|ref|NP_708505.2| alanyl-tRNA synthetase [Shigella flexneri 2a str. 301]
gi|110806677|ref|YP_690197.1| alanyl-tRNA synthetase [Shigella flexneri 5 str. 8401]
gi|384544280|ref|YP_005728343.1| alanyl-tRNA synthetase [Shigella flexneri 2002017]
gi|417703420|ref|ZP_12352526.1| alanyl-tRNA synthetase [Shigella flexneri K-218]
gi|417724324|ref|ZP_12373126.1| alanyl-tRNA synthetase [Shigella flexneri K-304]
gi|417734721|ref|ZP_12383369.1| alanyl-tRNA synthetase [Shigella flexneri 2747-71]
gi|420332576|ref|ZP_14834226.1| alanyl-tRNA synthetase [Shigella flexneri K-1770]
gi|424839065|ref|ZP_18263702.1| alanyl-tRNA synthetase [Shigella flexneri 5a str. M90T]
gi|44888327|sp|Q7UBU3.1|SYA_SHIFL RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|123146773|sp|Q0T1C3.1|SYA_SHIF8 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|30042313|gb|AAP18038.1| alanyl-tRNA synthetase [Shigella flexneri 2a str. 2457T]
gi|56383714|gb|AAN44212.2| alanyl-tRNA synthetase [Shigella flexneri 2a str. 301]
gi|110616225|gb|ABF04892.1| alanyl-tRNA synthetase [Shigella flexneri 5 str. 8401]
gi|281602067|gb|ADA75051.1| Alanyl-tRNA synthetase [Shigella flexneri 2002017]
gi|332755665|gb|EGJ86028.1| alanyl-tRNA synthetase [Shigella flexneri 2747-71]
gi|333000647|gb|EGK20224.1| alanyl-tRNA synthetase [Shigella flexneri K-218]
gi|333015876|gb|EGK35212.1| alanyl-tRNA synthetase [Shigella flexneri K-304]
gi|383468117|gb|EID63138.1| alanyl-tRNA synthetase [Shigella flexneri 5a str. M90T]
gi|391249407|gb|EIQ08642.1| alanyl-tRNA synthetase [Shigella flexneri K-1770]
Length = 876
Score = 577 bits (1487), Expect = e-162, Method: Compositional matrix adjust.
Identities = 315/689 (45%), Positives = 437/689 (63%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +I+ +++ + D +N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRTLIQAVAKVTGAT-----DLSNKSLRVIADHIRSCAFLIADGVMP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K F + I++ D+K ++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAKE--------TFFYKLVGPLIDVMGSAGEDLKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGFGADYNAM-IRVDSA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD L V +L V+GK V ++ G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G N AV + + +++G H G + G L+VG V+A +D R R +++H+ATH
Sbjct: 513 KGANFSFAVEDTQKYGQAIG----HIGKLAAGSLKVGDAVQADIDEARRARIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G SQ GSLV LRFDF+ + + E+ +E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M L+ AK GA+A+FGEKY E+V++ S
Sbjct: 629 NIMNLEAAKAKGAMALFGEKYDERVRVLS 657
>gi|423141317|ref|ZP_17128955.1| alanyl-tRNA synthetase [Salmonella enterica subsp. houtenae str.
ATCC BAA-1581]
gi|379050489|gb|EHY68381.1| alanyl-tRNA synthetase [Salmonella enterica subsp. houtenae str.
ATCC BAA-1581]
Length = 876
Score = 577 bits (1487), Expect = e-162, Method: Compositional matrix adjust.
Identities = 315/683 (46%), Positives = 434/683 (63%), Gaps = 50/683 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWFALPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NYE DL +I+ +++ + D +N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYEIDLFRTLIEAVAKVTGAT-----DLSNKSLRVIADHIRSCAFLVADGVLP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K F + IE+ ++K ++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAKE--------TFFYKLVGPLIEVMGSAGEELKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLQGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGY 515
V++T +V E + VD GF+ ME QRR+ A +A D +A + +EF GY
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRR---ARDASGFGADYNA-MIRVDSASEFKGY 461
Query: 516 DTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
D L V +L V+GK V + G + V+L++TPFYAESGGQ+GD G L +G
Sbjct: 462 DHLELNGKVTALFVDGKAVEAIDAGQEAVVVLDQTPFYAESGGQVGDKGEL---KGAGFT 518
Query: 576 TAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAAL 635
AV + + +++G H G + G L+VG V+A VD R R +++H+ATHL+ AAL
Sbjct: 519 FAVDDTQKYGQAIG----HLGKLSAGALQVGDAVQADVDEARRARIRLNHSATHLMHAAL 574
Query: 636 KKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALD 695
++V+G +Q GSLV+ LRFDF+ + + +E+ E+E L+N I ++T +M L+
Sbjct: 575 RQVLGAHVAQKGSLVSDKVLRFDFSHNEAMKPSEIREVEDLVNAQIRRNLPIETHIMDLE 634
Query: 696 DAKRAGAIAMFGEKYGEQVKISS 718
AK GA+A+FGEKY E+V++ S
Sbjct: 635 AAKAKGAMALFGEKYDERVRVLS 657
>gi|429887678|ref|ZP_19369188.1| Alanyl-tRNA synthetase [Vibrio cholerae PS15]
gi|429225247|gb|EKY31514.1| Alanyl-tRNA synthetase [Vibrio cholerae PS15]
Length = 860
Score = 577 bits (1487), Expect = e-162, Method: Compositional matrix adjust.
Identities = 313/686 (45%), Positives = 435/686 (63%), Gaps = 49/686 (7%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S D +R+ FL F+ S+GH+++ S+SLVP DPT+L T AGM QFK FLG R RA
Sbjct: 4 STDEVRRAFLSFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDCFLGLEKRAYTRAT 63
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
T+QRC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AIQ+AWEF T LP
Sbjct: 64 TAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIQYAWEFLTDVLQLPK 123
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG--------ADDNFWNSGATGPCGPCSE 215
RL ++VYE DDEAF+IWNK+VG+P + I R+G DNFW G TGPCGPC+E
Sbjct: 124 ERLLVTVYETDDEAFDIWNKKVGIPADRIIRIGDKKGGKKFDSDNFWQMGDTGPCGPCTE 183
Query: 216 IYYDFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLER 272
I+YD H D G D RFIE +N VFMQ+N+ DG++EPL + ++DTG+G+ER
Sbjct: 184 IFYD-HGDHIWGGPPGSPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPSVDTGMGIER 242
Query: 273 IARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDG 332
I+ I+Q V +NYE D+ +IK A++ + Y D TN +L+++ DH+R+ +L+ DG
Sbjct: 243 ISAIMQGVHSNYEIDVFQTLIKAAADA--IGY---QDLTNQSLRVVADHIRSCAFLIVDG 297
Query: 333 VFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVK 392
V PSN GRGYV+RR+IRRAVR G LG +GAF + E+ +++K
Sbjct: 298 VMPSNEGRGYVLRRIIRRAVRHGNKLGA--------QGAFFHKLVGPLAEVMGTAGAELK 349
Query: 393 AREQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTF 452
++ + + L+ EE F +TL+RG +L+ DAL + SG V L G+ F LYDT+
Sbjct: 350 KQQALVEKVLRIEEENFGRTLDRGMSILN----DALDQL--SGQV--LDGETVFKLYDTY 401
Query: 453 GFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEF 512
GFP ++T +VA E G S+D GF+ ME QR Q A A + D ++ L + +TEF
Sbjct: 402 GFPADLTNDVARERGFSIDEAGFEQAMEEQR---QRAREAGQFGTDYNS-LIKSATNTEF 457
Query: 513 LGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGT 572
GY +++V + V G V +S G ++L+ TPFYAESGGQ GD G L G
Sbjct: 458 CGYTASRGQSVVREMFVEGAEVSTLSAGDKAIIVLDNTPFYAESGGQCGDTGVLKTDAG- 516
Query: 573 NQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQ 632
+ V+D +K LG+ H G + +GVL G +V+AIVD K R ++H+ATHLL
Sbjct: 517 -----IFHVEDTQK-LGNAIAHHGVLAQGVLATGDQVDAIVDEKRRAAISLNHSATHLLH 570
Query: 633 AALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVM 692
AAL+KV+G+ +Q GSLV + LRFDF+ + E++E+ERL+N I + ++T +M
Sbjct: 571 AALRKVLGEHVAQKGSLVRAETLRFDFSHLEAMTPAEIKEVERLVNQEIRHNHNIETNIM 630
Query: 693 ALDDAKRAGAIAMFGEKYGEQVKISS 718
+D+AK GA+A+FGEKY +QV++ S
Sbjct: 631 NIDEAKAKGAMALFGEKYDDQVRVLS 656
>gi|15640567|ref|NP_230196.1| alanyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121590679|ref|ZP_01678012.1| alanyl-tRNA synthetase [Vibrio cholerae 2740-80]
gi|121728567|ref|ZP_01681589.1| alanyl-tRNA synthetase [Vibrio cholerae V52]
gi|153819108|ref|ZP_01971775.1| alanyl-tRNA synthetase [Vibrio cholerae NCTC 8457]
gi|153823946|ref|ZP_01976613.1| alanyl-tRNA synthetase [Vibrio cholerae B33]
gi|227080728|ref|YP_002809279.1| alanyl-tRNA synthetase [Vibrio cholerae M66-2]
gi|229507157|ref|ZP_04396663.1| alanyl-tRNA synthetase [Vibrio cholerae BX 330286]
gi|229508981|ref|ZP_04398469.1| alanyl-tRNA synthetase [Vibrio cholerae B33]
gi|229519648|ref|ZP_04409091.1| alanyl-tRNA synthetase [Vibrio cholerae RC9]
gi|229606165|ref|YP_002876813.1| alanyl-tRNA synthetase [Vibrio cholerae MJ-1236]
gi|254850784|ref|ZP_05240134.1| alanyl-tRNA synthetase [Vibrio cholerae MO10]
gi|255744228|ref|ZP_05418181.1| alanyl-tRNA synthetase [Vibrio cholera CIRS 101]
gi|360037170|ref|YP_004938933.1| alanyl-tRNA synthetase [Vibrio cholerae O1 str. 2010EL-1786]
gi|379740417|ref|YP_005332386.1| alanyl-tRNA synthetase [Vibrio cholerae IEC224]
gi|417815377|ref|ZP_12462011.1| alanyl-tRNA synthetase [Vibrio cholerae HCUF01]
gi|418331520|ref|ZP_12942462.1| alanyl-tRNA synthetase [Vibrio cholerae HC-06A1]
gi|418336395|ref|ZP_12945294.1| alanyl-tRNA synthetase [Vibrio cholerae HC-23A1]
gi|418342776|ref|ZP_12949574.1| alanyl-tRNA synthetase [Vibrio cholerae HC-28A1]
gi|418347939|ref|ZP_12952675.1| alanyl-tRNA synthetase [Vibrio cholerae HC-43A1]
gi|419825022|ref|ZP_14348528.1| alanine--tRNA ligase [Vibrio cholerae CP1033(6)]
gi|421315762|ref|ZP_15766334.1| alanyl-tRNA synthetase [Vibrio cholerae CP1032(5)]
gi|421323367|ref|ZP_15773896.1| alanyl-tRNA synthetase [Vibrio cholerae CP1041(14)]
gi|421327771|ref|ZP_15778287.1| alanyl-tRNA synthetase [Vibrio cholerae CP1042(15)]
gi|421330779|ref|ZP_15781261.1| alanyl-tRNA synthetase [Vibrio cholerae CP1046(19)]
gi|421338257|ref|ZP_15788695.1| alanyl-tRNA synthetase [Vibrio cholerae HC-20A2]
gi|421346644|ref|ZP_15797027.1| alanyl-tRNA synthetase [Vibrio cholerae HC-46A1]
gi|422890590|ref|ZP_16933006.1| alanyl-tRNA synthetase [Vibrio cholerae HC-40A1]
gi|422901457|ref|ZP_16936825.1| alanyl-tRNA synthetase [Vibrio cholerae HC-48A1]
gi|422905673|ref|ZP_16940524.1| alanyl-tRNA synthetase [Vibrio cholerae HC-70A1]
gi|422912277|ref|ZP_16946804.1| alanyl-tRNA synthetase [Vibrio cholerae HFU-02]
gi|422924756|ref|ZP_16957790.1| alanyl-tRNA synthetase [Vibrio cholerae HC-38A1]
gi|423144080|ref|ZP_17131695.1| alanyl-tRNA synthetase [Vibrio cholerae HC-19A1]
gi|423148784|ref|ZP_17136144.1| alanyl-tRNA synthetase [Vibrio cholerae HC-21A1]
gi|423152575|ref|ZP_17139774.1| alanyl-tRNA synthetase [Vibrio cholerae HC-22A1]
gi|423155357|ref|ZP_17142494.1| alanyl-tRNA synthetase [Vibrio cholerae HC-32A1]
gi|423163903|ref|ZP_17150692.1| alanyl-tRNA synthetase [Vibrio cholerae HC-48B2]
gi|423730030|ref|ZP_17703349.1| alanine--tRNA ligase [Vibrio cholerae HC-17A1]
gi|423747523|ref|ZP_17711426.1| alanine--tRNA ligase [Vibrio cholerae HC-50A2]
gi|423891749|ref|ZP_17725440.1| alanine--tRNA ligase [Vibrio cholerae HC-62A1]
gi|423926526|ref|ZP_17730055.1| alanine--tRNA ligase [Vibrio cholerae HC-77A1]
gi|424001081|ref|ZP_17744171.1| alanine--tRNA ligase [Vibrio cholerae HC-17A2]
gi|424005241|ref|ZP_17748226.1| alanine--tRNA ligase [Vibrio cholerae HC-37A1]
gi|424023250|ref|ZP_17762915.1| alanine--tRNA ligase [Vibrio cholerae HC-62B1]
gi|424026052|ref|ZP_17765669.1| alanine--tRNA ligase [Vibrio cholerae HC-69A1]
gi|424585457|ref|ZP_18025051.1| alanyl-tRNA synthetase [Vibrio cholerae CP1030(3)]
gi|424594075|ref|ZP_18033414.1| alanyl-tRNA synthetase [Vibrio cholerae CP1040(13)]
gi|424598013|ref|ZP_18037213.1| alanyl-tRNA synthetase [Vibrio Cholerae CP1044(17)]
gi|424600773|ref|ZP_18039930.1| alanyl-tRNA synthetase [Vibrio cholerae CP1047(20)]
gi|424605667|ref|ZP_18044633.1| alanyl-tRNA synthetase [Vibrio cholerae CP1050(23)]
gi|424609505|ref|ZP_18048364.1| alanyl-tRNA synthetase [Vibrio cholerae HC-39A1]
gi|424612306|ref|ZP_18051114.1| alanyl-tRNA synthetase [Vibrio cholerae HC-41A1]
gi|424616182|ref|ZP_18054874.1| alanyl-tRNA synthetase [Vibrio cholerae HC-42A1]
gi|424621062|ref|ZP_18059591.1| alanyl-tRNA synthetase [Vibrio cholerae HC-47A1]
gi|424644040|ref|ZP_18081795.1| alanyl-tRNA synthetase [Vibrio cholerae HC-56A2]
gi|424651685|ref|ZP_18089210.1| alanyl-tRNA synthetase [Vibrio cholerae HC-57A2]
gi|424655632|ref|ZP_18092935.1| alanyl-tRNA synthetase [Vibrio cholerae HC-81A2]
gi|440708756|ref|ZP_20889417.1| alanyl-tRNA synthetase [Vibrio cholerae 4260B]
gi|443502581|ref|ZP_21069571.1| alanyl-tRNA synthetase [Vibrio cholerae HC-64A1]
gi|443506492|ref|ZP_21073285.1| alanyl-tRNA synthetase [Vibrio cholerae HC-65A1]
gi|443510600|ref|ZP_21077266.1| alanyl-tRNA synthetase [Vibrio cholerae HC-67A1]
gi|443514159|ref|ZP_21080701.1| alanyl-tRNA synthetase [Vibrio cholerae HC-68A1]
gi|443517973|ref|ZP_21084392.1| alanyl-tRNA synthetase [Vibrio cholerae HC-71A1]
gi|443522841|ref|ZP_21089083.1| alanyl-tRNA synthetase [Vibrio cholerae HC-72A2]
gi|443537812|ref|ZP_21103669.1| alanyl-tRNA synthetase [Vibrio cholerae HC-81A1]
gi|449054225|ref|ZP_21732893.1| Alanyl-tRNA synthetase [Vibrio cholerae O1 str. Inaba G4222]
gi|12644031|sp|Q56648.2|SYA_VIBCH RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|9654973|gb|AAF93713.1| alanyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121547465|gb|EAX57573.1| alanyl-tRNA synthetase [Vibrio cholerae 2740-80]
gi|121629179|gb|EAX61620.1| alanyl-tRNA synthetase [Vibrio cholerae V52]
gi|126510340|gb|EAZ72934.1| alanyl-tRNA synthetase [Vibrio cholerae NCTC 8457]
gi|126518530|gb|EAZ75753.1| alanyl-tRNA synthetase [Vibrio cholerae B33]
gi|227008616|gb|ACP04828.1| alanyl-tRNA synthetase [Vibrio cholerae M66-2]
gi|229344337|gb|EEO09312.1| alanyl-tRNA synthetase [Vibrio cholerae RC9]
gi|229353906|gb|EEO18840.1| alanyl-tRNA synthetase [Vibrio cholerae B33]
gi|229355902|gb|EEO20822.1| alanyl-tRNA synthetase [Vibrio cholerae BX 330286]
gi|229368820|gb|ACQ59243.1| alanyl-tRNA synthetase [Vibrio cholerae MJ-1236]
gi|254846489|gb|EET24903.1| alanyl-tRNA synthetase [Vibrio cholerae MO10]
gi|255738168|gb|EET93560.1| alanyl-tRNA synthetase [Vibrio cholera CIRS 101]
gi|340043363|gb|EGR04322.1| alanyl-tRNA synthetase [Vibrio cholerae HCUF01]
gi|341625459|gb|EGS50912.1| alanyl-tRNA synthetase [Vibrio cholerae HC-70A1]
gi|341626602|gb|EGS51973.1| alanyl-tRNA synthetase [Vibrio cholerae HC-48A1]
gi|341627110|gb|EGS52438.1| alanyl-tRNA synthetase [Vibrio cholerae HC-40A1]
gi|341641057|gb|EGS65629.1| alanyl-tRNA synthetase [Vibrio cholerae HFU-02]
gi|341648584|gb|EGS72636.1| alanyl-tRNA synthetase [Vibrio cholerae HC-38A1]
gi|356420547|gb|EHH74066.1| alanyl-tRNA synthetase [Vibrio cholerae HC-06A1]
gi|356421722|gb|EHH75214.1| alanyl-tRNA synthetase [Vibrio cholerae HC-21A1]
gi|356426213|gb|EHH79537.1| alanyl-tRNA synthetase [Vibrio cholerae HC-19A1]
gi|356433176|gb|EHH86369.1| alanyl-tRNA synthetase [Vibrio cholerae HC-23A1]
gi|356434741|gb|EHH87915.1| alanyl-tRNA synthetase [Vibrio cholerae HC-22A1]
gi|356437994|gb|EHH91059.1| alanyl-tRNA synthetase [Vibrio cholerae HC-28A1]
gi|356443175|gb|EHH96004.1| alanyl-tRNA synthetase [Vibrio cholerae HC-32A1]
gi|356448050|gb|EHI00835.1| alanyl-tRNA synthetase [Vibrio cholerae HC-43A1]
gi|356456422|gb|EHI09028.1| alanyl-tRNA synthetase [Vibrio cholerae HC-48B2]
gi|356648324|gb|AET28379.1| alanyl-tRNA synthetase [Vibrio cholerae O1 str. 2010EL-1786]
gi|378793927|gb|AFC57398.1| alanyl-tRNA synthetase [Vibrio cholerae IEC224]
gi|395922503|gb|EJH33319.1| alanyl-tRNA synthetase [Vibrio cholerae CP1032(5)]
gi|395923212|gb|EJH34024.1| alanyl-tRNA synthetase [Vibrio cholerae CP1041(14)]
gi|395931505|gb|EJH42250.1| alanyl-tRNA synthetase [Vibrio cholerae CP1042(15)]
gi|395934632|gb|EJH45370.1| alanyl-tRNA synthetase [Vibrio cholerae CP1046(19)]
gi|395945377|gb|EJH56043.1| alanyl-tRNA synthetase [Vibrio cholerae HC-20A2]
gi|395946792|gb|EJH57452.1| alanyl-tRNA synthetase [Vibrio cholerae HC-46A1]
gi|395962956|gb|EJH73244.1| alanyl-tRNA synthetase [Vibrio cholerae HC-56A2]
gi|395963844|gb|EJH74096.1| alanyl-tRNA synthetase [Vibrio cholerae HC-57A2]
gi|395966673|gb|EJH76788.1| alanyl-tRNA synthetase [Vibrio cholerae HC-42A1]
gi|395974858|gb|EJH84368.1| alanyl-tRNA synthetase [Vibrio cholerae HC-47A1]
gi|395977600|gb|EJH87005.1| alanyl-tRNA synthetase [Vibrio cholerae CP1030(3)]
gi|395978993|gb|EJH88357.1| alanyl-tRNA synthetase [Vibrio cholerae CP1047(20)]
gi|408009767|gb|EKG47662.1| alanyl-tRNA synthetase [Vibrio cholerae HC-39A1]
gi|408016647|gb|EKG54181.1| alanyl-tRNA synthetase [Vibrio cholerae HC-41A1]
gi|408037213|gb|EKG73613.1| alanyl-tRNA synthetase [Vibrio cholerae CP1040(13)]
gi|408044886|gb|EKG80772.1| alanyl-tRNA synthetase [Vibrio Cholerae CP1044(17)]
gi|408046780|gb|EKG82449.1| alanyl-tRNA synthetase [Vibrio cholerae CP1050(23)]
gi|408057408|gb|EKG92259.1| alanyl-tRNA synthetase [Vibrio cholerae HC-81A2]
gi|408611293|gb|EKK84654.1| alanine--tRNA ligase [Vibrio cholerae CP1033(6)]
gi|408627406|gb|EKL00218.1| alanine--tRNA ligase [Vibrio cholerae HC-17A1]
gi|408641822|gb|EKL13588.1| alanine--tRNA ligase [Vibrio cholerae HC-50A2]
gi|408658595|gb|EKL29661.1| alanine--tRNA ligase [Vibrio cholerae HC-77A1]
gi|408659602|gb|EKL30641.1| alanine--tRNA ligase [Vibrio cholerae HC-62A1]
gi|408848836|gb|EKL88873.1| alanine--tRNA ligase [Vibrio cholerae HC-37A1]
gi|408849397|gb|EKL89418.1| alanine--tRNA ligase [Vibrio cholerae HC-17A2]
gi|408873458|gb|EKM12655.1| alanine--tRNA ligase [Vibrio cholerae HC-62B1]
gi|408881373|gb|EKM20269.1| alanine--tRNA ligase [Vibrio cholerae HC-69A1]
gi|439975852|gb|ELP51959.1| alanyl-tRNA synthetase [Vibrio cholerae 4260B]
gi|443432972|gb|ELS75492.1| alanyl-tRNA synthetase [Vibrio cholerae HC-64A1]
gi|443436908|gb|ELS83022.1| alanyl-tRNA synthetase [Vibrio cholerae HC-65A1]
gi|443440471|gb|ELS90158.1| alanyl-tRNA synthetase [Vibrio cholerae HC-67A1]
gi|443444568|gb|ELS97839.1| alanyl-tRNA synthetase [Vibrio cholerae HC-68A1]
gi|443448403|gb|ELT05036.1| alanyl-tRNA synthetase [Vibrio cholerae HC-71A1]
gi|443451177|gb|ELT11439.1| alanyl-tRNA synthetase [Vibrio cholerae HC-72A2]
gi|443466637|gb|ELT41294.1| alanyl-tRNA synthetase [Vibrio cholerae HC-81A1]
gi|448266222|gb|EMB03451.1| Alanyl-tRNA synthetase [Vibrio cholerae O1 str. Inaba G4222]
Length = 860
Score = 577 bits (1487), Expect = e-162, Method: Compositional matrix adjust.
Identities = 315/687 (45%), Positives = 435/687 (63%), Gaps = 51/687 (7%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S D +R+ FL F+ S+GH+++ S+SLVP DPT+L T AGM QFK FLG R RA
Sbjct: 4 STDEVRRAFLSFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDCFLGLEKRAYTRAT 63
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
T+QRC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AIQ+AWEF T LP
Sbjct: 64 TAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIQYAWEFLTDVLQLPK 123
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG--------ADDNFWNSGATGPCGPCSE 215
RL ++VYE DDEAF+IWNK+VG+P + I R+G DNFW G TGPCGPC+E
Sbjct: 124 ERLLVTVYETDDEAFDIWNKKVGIPADRIIRIGDKKGGKKFDSDNFWQMGDTGPCGPCTE 183
Query: 216 IYYDFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLER 272
I+YD H D G D RFIE +N VFMQ+N+ DG++EPL + ++DTG+G+ER
Sbjct: 184 IFYD-HGDHIWGGPPGSPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPSVDTGMGIER 242
Query: 273 IARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDG 332
I+ I+Q V +NYE D+ +IK A++ + Y D TN +L+++ DH+R+ +L+ DG
Sbjct: 243 ISAIMQGVHSNYEIDVFQTLIKAAADA--IGY---QDLTNQSLRVVADHIRSCAFLIVDG 297
Query: 333 VFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVK 392
V PSN GRGYV+RR+IRRAVR G LG +G L G + +EL
Sbjct: 298 VMPSNEGRGYVLRRIIRRAVRHGNKLGAQGAFFHKLVGPLAEVMGTAGVELK-------- 349
Query: 393 AREQRILEELKR-EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDT 451
++Q ++E++ R EE F +TL+RG +L+ DAL + SG V L G+ F LYDT
Sbjct: 350 -KQQALVEKVLRIEEENFGRTLDRGMSILN----DALDQL--SGQV--LDGETVFKLYDT 400
Query: 452 FGFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTE 511
+GFP ++T +VA E G S+D GF+ ME QR Q A A + D ++ L + +TE
Sbjct: 401 YGFPADLTNDVARERGFSIDEAGFEQAMEEQR---QRAREAGQFGTDYNS-LIKSATNTE 456
Query: 512 FLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQG 571
F GY +++V + V G V +S G ++L+ TPFYAESGGQ GD G L G
Sbjct: 457 FCGYTASRGQSVVREMFVEGAEVSTLSAGDKAIIVLDNTPFYAESGGQCGDTGVLKTDAG 516
Query: 572 TNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLL 631
+ V+D +K LG+ H G I +GVL G +V+AIVD K R ++H+ATHLL
Sbjct: 517 ------IFHVEDTQK-LGNAIAHHGVIAQGVLATGDQVDAIVDEKRRAAISLNHSATHLL 569
Query: 632 QAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKV 691
AAL+KV+G+ +Q GSLV + LRFDF+ + E++E+ERL+N + + ++T +
Sbjct: 570 HAALRKVLGEHVAQKGSLVRAETLRFDFSHLEAMTAAEIKEVERLVNQEVRRNHSIETNI 629
Query: 692 MALDDAKRAGAIAMFGEKYGEQVKISS 718
M +D+AK GA+A+FGEKY +QV++ S
Sbjct: 630 MNIDEAKAKGAMALFGEKYDDQVRVLS 656
>gi|187734262|ref|YP_001881554.1| alanyl-tRNA synthetase [Shigella boydii CDC 3083-94]
gi|205830210|sp|B2U049.1|SYA_SHIB3 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|187431254|gb|ACD10528.1| alanyl-tRNA synthetase [Shigella boydii CDC 3083-94]
Length = 876
Score = 577 bits (1487), Expect = e-162, Method: Compositional matrix adjust.
Identities = 316/689 (45%), Positives = 437/689 (63%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +I+ +++ + D +N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRTLIQAVAKVTGAT-----DLSNKSLRVIADHIRSCAFLIADGVMP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K F + I++ D+K ++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAKE--------TFFYKLVGPLIDVMGSAGEDLKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGFGADYNAM-IRVDSA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD L V +L V+GK V ++ G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G N AV + + +++G H G + G L+VG V+A VD R R +++H+ATH
Sbjct: 513 KGANFSFAVEDTQKYGQAIG----HIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G SQ GSLV LRFDF+ + + E+ +E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRVVEDLVNAQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M L+ AK GA+A+FGEKY E+V++ S
Sbjct: 629 NIMDLEAAKAKGAMALFGEKYDERVRVLS 657
>gi|16766133|ref|NP_461748.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|168245264|ref|ZP_02670196.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|168464053|ref|ZP_02697970.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. SL317]
gi|194443356|ref|YP_002042068.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. SL254]
gi|194450006|ref|YP_002046787.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|197264802|ref|ZP_03164876.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA23]
gi|374981458|ref|ZP_09722785.1| Alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhimurium str. TN061786]
gi|378446184|ref|YP_005233816.1| AlaRS [Salmonella enterica subsp. enterica serovar Typhimurium str.
D23580]
gi|378451563|ref|YP_005238923.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhimurium str. 14028S]
gi|378700739|ref|YP_005182696.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhimurium str. SL1344]
gi|378985416|ref|YP_005248572.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhimurium str. T000240]
gi|378990152|ref|YP_005253316.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhimurium str. UK-1]
gi|379702079|ref|YP_005243807.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhimurium str. ST4/74]
gi|383497502|ref|YP_005398191.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhimurium str. 798]
gi|386592516|ref|YP_006088916.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Heidelberg str. B182]
gi|418760331|ref|ZP_13316488.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35185]
gi|418764694|ref|ZP_13320789.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35199]
gi|418773020|ref|ZP_13329012.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21539]
gi|418779570|ref|ZP_13335469.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35188]
gi|418783881|ref|ZP_13339725.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21559]
gi|418787833|ref|ZP_13343632.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19447]
gi|418793504|ref|ZP_13349233.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19449]
gi|418799220|ref|ZP_13354887.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19567]
gi|418800549|ref|ZP_13356200.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35202]
gi|418806019|ref|ZP_13361593.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21550]
gi|418809924|ref|ZP_13365467.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 22513]
gi|418816042|ref|ZP_13371536.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21538]
gi|418823625|ref|ZP_13379032.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 22425]
gi|418829909|ref|ZP_13384873.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM N18486]
gi|418836846|ref|ZP_13391728.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM N1543]
gi|418841833|ref|ZP_13396648.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21554]
gi|418847802|ref|ZP_13402543.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 37978]
gi|418852649|ref|ZP_13407348.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19593]
gi|418867304|ref|ZP_13421763.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 4176]
gi|419731890|ref|ZP_14258798.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41579]
gi|419735512|ref|ZP_14262385.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41563]
gi|419737099|ref|ZP_14263923.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41573]
gi|419741681|ref|ZP_14268359.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41566]
gi|419748188|ref|ZP_14274687.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41565]
gi|419787855|ref|ZP_14313557.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. Levine 1]
gi|419793529|ref|ZP_14319150.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. Levine 15]
gi|421569892|ref|ZP_16015588.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00322]
gi|421575116|ref|ZP_16020730.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00325]
gi|421580457|ref|ZP_16026015.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00326]
gi|421584143|ref|ZP_16029653.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00328]
gi|422027037|ref|ZP_16373383.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm1]
gi|422032071|ref|ZP_16378188.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm2]
gi|427553706|ref|ZP_18928682.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm8]
gi|427571262|ref|ZP_18933399.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm9]
gi|427591970|ref|ZP_18938198.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm3]
gi|427615169|ref|ZP_18943082.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm4]
gi|427639399|ref|ZP_18947964.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm6]
gi|427657058|ref|ZP_18952713.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm10]
gi|427662369|ref|ZP_18957674.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm11]
gi|427675894|ref|ZP_18962491.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm12]
gi|20532254|sp|Q8ZMK6.1|SYA_SALTY RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|16421372|gb|AAL21707.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|194402019|gb|ACF62241.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. SL254]
gi|194408310|gb|ACF68529.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|195633250|gb|EDX51664.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. SL317]
gi|197243057|gb|EDY25677.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA23]
gi|205335995|gb|EDZ22759.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|261247963|emb|CBG25796.1| AlaRS [Salmonella enterica subsp. enterica serovar Typhimurium str.
D23580]
gi|267994942|gb|ACY89827.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhimurium str. 14028S]
gi|301159387|emb|CBW18905.1| Alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhimurium str. SL1344]
gi|312913845|dbj|BAJ37819.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhimurium str. T000240]
gi|321223380|gb|EFX48446.1| Alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhimurium str. TN061786]
gi|323131178|gb|ADX18608.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhimurium str. ST4/74]
gi|332989699|gb|AEF08682.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhimurium str. UK-1]
gi|380464323|gb|AFD59726.1| Alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhimurium str. 798]
gi|381290521|gb|EIC31785.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41579]
gi|381293836|gb|EIC34976.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41563]
gi|381307138|gb|EIC48004.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41573]
gi|381314942|gb|EIC55707.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41565]
gi|381315048|gb|EIC55811.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41566]
gi|383799557|gb|AFH46639.1| Alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Heidelberg str. B182]
gi|392616888|gb|EIW99316.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. Levine 15]
gi|392618791|gb|EIX01183.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. Levine 1]
gi|392730277|gb|EIZ87522.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21539]
gi|392742439|gb|EIZ99527.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35199]
gi|392742959|gb|EJA00037.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35185]
gi|392751983|gb|EJA08926.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35188]
gi|392756165|gb|EJA13063.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21559]
gi|392764194|gb|EJA20996.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19567]
gi|392764627|gb|EJA21425.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19449]
gi|392764742|gb|EJA21536.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19447]
gi|392782652|gb|EJA39283.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 22513]
gi|392783423|gb|EJA40044.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21550]
gi|392783688|gb|EJA40303.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35202]
gi|392785616|gb|EJA42187.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 22425]
gi|392790645|gb|EJA47139.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21538]
gi|392799968|gb|EJA56207.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM N1543]
gi|392802703|gb|EJA58912.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM N18486]
gi|392807903|gb|EJA63966.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21554]
gi|392824309|gb|EJA80096.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 37978]
gi|392829053|gb|EJA84737.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19593]
gi|392839437|gb|EJA94977.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 4176]
gi|402520213|gb|EJW27567.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00326]
gi|402522768|gb|EJW30088.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00325]
gi|402525928|gb|EJW33210.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00322]
gi|402531483|gb|EJW38694.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00328]
gi|414015292|gb|EKS99108.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm1]
gi|414016286|gb|EKT00059.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm8]
gi|414016974|gb|EKT00724.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm2]
gi|414029536|gb|EKT12693.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm9]
gi|414031083|gb|EKT14158.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm3]
gi|414034613|gb|EKT17538.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm4]
gi|414044461|gb|EKT26903.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm6]
gi|414044990|gb|EKT27417.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm10]
gi|414050199|gb|EKT32380.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm11]
gi|414057442|gb|EKT39196.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm12]
Length = 876
Score = 577 bits (1487), Expect = e-162, Method: Compositional matrix adjust.
Identities = 316/689 (45%), Positives = 438/689 (63%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWFALPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +I+ +++ + D N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRTLIEAVAKVTGAT-----DLGNKSLRVIADHIRSCAFLVADGVLP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K F + IE+ ++K ++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAKE--------TFFYKLVGPLIEVMGSAGEELKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLQGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGFGADYNAM-IRVDSA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD L V +L V+GK V ++ G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDHLELNGKVTALFVDGKAVEAINAGQEAVVVLDQTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G AV + + +++G H G + G L+VG V+A VD R R +++H+ATH
Sbjct: 513 KGAGFTFAVDDTQKYGQAIG----HLGKLSAGALKVGDAVQADVDEARRARIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G +Q GSLV+ LRFDF+ + + +E+ E+E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVAQKGSLVSDKVLRFDFSHNEAMKPSEIREVEDLVNAQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M LD AK GA+A+FGEKY E+V++ S
Sbjct: 629 NIMDLDAAKAKGAMALFGEKYDERVRVLS 657
>gi|251785981|ref|YP_003000285.1| alanyl-tRNA synthetase [Escherichia coli BL21(DE3)]
gi|253772448|ref|YP_003035279.1| alanyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|254162628|ref|YP_003045736.1| alanyl-tRNA synthetase [Escherichia coli B str. REL606]
gi|254289389|ref|YP_003055137.1| alanyl-tRNA synthetase [Escherichia coli BL21(DE3)]
gi|242378254|emb|CAQ33029.1| alanyl-tRNA synthetase [Escherichia coli BL21(DE3)]
gi|253323492|gb|ACT28094.1| alanyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|253974529|gb|ACT40200.1| alanyl-tRNA synthetase [Escherichia coli B str. REL606]
gi|253978696|gb|ACT44366.1| alanyl-tRNA synthetase [Escherichia coli BL21(DE3)]
Length = 876
Score = 577 bits (1487), Expect = e-162, Method: Compositional matrix adjust.
Identities = 316/689 (45%), Positives = 437/689 (63%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +I+ +++ + D +N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRTLIQAVAKVTGAT-----DLSNKSLRVIADHIRSCAFLIADGVMP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K F + I++ D+K ++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAKE--------TFFYKLVGPLIDVMGSAGEDLKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGFGADYNAM-IRVDSA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD L V +L V+GK V ++ G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G N AV + + +++G H G + G L+VG V+A VD R R +++H+ATH
Sbjct: 513 KGANFSFAVEDTQKYGQAIG----HIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G SQ GSLV LRFDF+ + + E+ +E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNTQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M L+ AK GA+A+FGEKY E+V++ S
Sbjct: 629 NIMDLEAAKAKGAMALFGEKYDERVRVLS 657
>gi|16130604|ref|NP_417177.1| alanyl-tRNA synthetase [Escherichia coli str. K-12 substr. MG1655]
gi|170082274|ref|YP_001731594.1| alanyl-tRNA synthetase [Escherichia coli str. K-12 substr. DH10B]
gi|188492036|ref|ZP_02999306.1| alanyl-tRNA synthetase [Escherichia coli 53638]
gi|194439000|ref|ZP_03071084.1| alanyl-tRNA synthetase [Escherichia coli 101-1]
gi|238901834|ref|YP_002927630.1| alanyl-tRNA synthetase [Escherichia coli BW2952]
gi|331643380|ref|ZP_08344511.1| alanine--tRNA ligase [Escherichia coli H736]
gi|386281742|ref|ZP_10059401.1| alanyl-tRNA synthetase [Escherichia sp. 4_1_40B]
gi|386594564|ref|YP_006090964.1| alanyl-tRNA synthetase [Escherichia coli DH1]
gi|387613320|ref|YP_006116436.1| alanyl-tRNA synthetase [Escherichia coli ETEC H10407]
gi|387622380|ref|YP_006130008.1| alanyl-tRNA synthetase [Escherichia coli DH1]
gi|388478714|ref|YP_490906.1| alanyl-tRNA synthetase [Escherichia coli str. K-12 substr. W3110]
gi|404376001|ref|ZP_10981177.1| alanyl-tRNA synthetase [Escherichia sp. 1_1_43]
gi|417262406|ref|ZP_12049880.1| alanine--tRNA ligase [Escherichia coli 2.3916]
gi|417291559|ref|ZP_12078840.1| alanine--tRNA ligase [Escherichia coli B41]
gi|417614142|ref|ZP_12264599.1| alanyl-tRNA synthetase [Escherichia coli STEC_EH250]
gi|417944071|ref|ZP_12587316.1| alanyl-tRNA synthetase [Escherichia coli XH140A]
gi|417975531|ref|ZP_12616329.1| alanyl-tRNA synthetase [Escherichia coli XH001]
gi|419165463|ref|ZP_13709917.1| alanyl-tRNA synthetase [Escherichia coli DEC6E]
gi|419812892|ref|ZP_14337753.1| alanyl-tRNA synthetase [Escherichia coli O32:H37 str. P4]
gi|422771440|ref|ZP_16825130.1| alanyl-tRNA synthetase [Escherichia coli E482]
gi|422787779|ref|ZP_16840517.1| alanyl-tRNA synthetase [Escherichia coli H489]
gi|422791999|ref|ZP_16844701.1| alanyl-tRNA synthetase [Escherichia coli TA007]
gi|423703968|ref|ZP_17678393.1| alanyl-tRNA synthetase [Escherichia coli H730]
gi|432418138|ref|ZP_19660735.1| alanyl-tRNA synthetase [Escherichia coli KTE44]
gi|432564951|ref|ZP_19801527.1| alanyl-tRNA synthetase [Escherichia coli KTE51]
gi|432576923|ref|ZP_19813378.1| alanyl-tRNA synthetase [Escherichia coli KTE56]
gi|432628326|ref|ZP_19864299.1| alanyl-tRNA synthetase [Escherichia coli KTE77]
gi|432637908|ref|ZP_19873775.1| alanyl-tRNA synthetase [Escherichia coli KTE81]
gi|432661893|ref|ZP_19897532.1| alanyl-tRNA synthetase [Escherichia coli KTE111]
gi|432686503|ref|ZP_19921796.1| alanyl-tRNA synthetase [Escherichia coli KTE156]
gi|432687895|ref|ZP_19923175.1| alanyl-tRNA synthetase [Escherichia coli KTE161]
gi|432705449|ref|ZP_19940547.1| alanyl-tRNA synthetase [Escherichia coli KTE171]
gi|432738147|ref|ZP_19972902.1| alanyl-tRNA synthetase [Escherichia coli KTE42]
gi|432876549|ref|ZP_20094467.1| alanyl-tRNA synthetase [Escherichia coli KTE154]
gi|432956322|ref|ZP_20148049.1| alanyl-tRNA synthetase [Escherichia coli KTE197]
gi|433049076|ref|ZP_20236419.1| alanyl-tRNA synthetase [Escherichia coli KTE120]
gi|442595090|ref|ZP_21012954.1| Alanyl-tRNA synthetase [Escherichia coli O10:K5(L):H4 str. ATCC
23506]
gi|442598432|ref|ZP_21016200.1| Alanyl-tRNA synthetase [Escherichia coli O5:K4(L):H4 str. ATCC
23502]
gi|450247469|ref|ZP_21901170.1| alanyl-tRNA ligase [Escherichia coli S17]
gi|2507425|sp|P00957.2|SYA_ECOLI RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|205830082|sp|B1XCM5.1|SYA_ECODH RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|1789048|gb|AAC75739.1| alanyl-tRNA synthetase [Escherichia coli str. K-12 substr. MG1655]
gi|1800083|dbj|BAA16559.1| alanyl-tRNA synthetase [Escherichia coli str. K12 substr. W3110]
gi|169890109|gb|ACB03816.1| alanyl-tRNA synthetase [Escherichia coli str. K-12 substr. DH10B]
gi|188487235|gb|EDU62338.1| alanyl-tRNA synthetase [Escherichia coli 53638]
gi|194422121|gb|EDX38124.1| alanyl-tRNA synthetase [Escherichia coli 101-1]
gi|226839360|gb|EEH71381.1| alanyl-tRNA synthetase [Escherichia sp. 1_1_43]
gi|238859951|gb|ACR61949.1| alanyl-tRNA synthetase [Escherichia coli BW2952]
gi|260448253|gb|ACX38675.1| alanyl-tRNA synthetase [Escherichia coli DH1]
gi|309703056|emb|CBJ02388.1| alanyl-tRNA synthetase [Escherichia coli ETEC H10407]
gi|315137304|dbj|BAJ44463.1| alanyl-tRNA synthetase [Escherichia coli DH1]
gi|323941473|gb|EGB37656.1| alanyl-tRNA synthetase [Escherichia coli E482]
gi|323960644|gb|EGB56270.1| alanyl-tRNA synthetase [Escherichia coli H489]
gi|323971514|gb|EGB66748.1| alanyl-tRNA synthetase [Escherichia coli TA007]
gi|331036851|gb|EGI09075.1| alanine--tRNA ligase [Escherichia coli H736]
gi|342364205|gb|EGU28307.1| alanyl-tRNA synthetase [Escherichia coli XH140A]
gi|344194692|gb|EGV48764.1| alanyl-tRNA synthetase [Escherichia coli XH001]
gi|345361176|gb|EGW93337.1| alanyl-tRNA synthetase [Escherichia coli STEC_EH250]
gi|359332954|dbj|BAL39401.1| alanyl-tRNA synthetase [Escherichia coli str. K-12 substr. MDS42]
gi|378008392|gb|EHV71351.1| alanyl-tRNA synthetase [Escherichia coli DEC6E]
gi|385154307|gb|EIF16322.1| alanyl-tRNA synthetase [Escherichia coli O32:H37 str. P4]
gi|385707084|gb|EIG44116.1| alanyl-tRNA synthetase [Escherichia coli H730]
gi|386120933|gb|EIG69551.1| alanyl-tRNA synthetase [Escherichia sp. 4_1_40B]
gi|386223852|gb|EII46201.1| alanine--tRNA ligase [Escherichia coli 2.3916]
gi|386253881|gb|EIJ03571.1| alanine--tRNA ligase [Escherichia coli B41]
gi|430937979|gb|ELC58228.1| alanyl-tRNA synthetase [Escherichia coli KTE44]
gi|431092199|gb|ELD97903.1| alanyl-tRNA synthetase [Escherichia coli KTE51]
gi|431114159|gb|ELE17711.1| alanyl-tRNA synthetase [Escherichia coli KTE56]
gi|431162103|gb|ELE62561.1| alanyl-tRNA synthetase [Escherichia coli KTE77]
gi|431169323|gb|ELE69542.1| alanyl-tRNA synthetase [Escherichia coli KTE81]
gi|431198516|gb|ELE97338.1| alanyl-tRNA synthetase [Escherichia coli KTE111]
gi|431220477|gb|ELF17810.1| alanyl-tRNA synthetase [Escherichia coli KTE156]
gi|431237947|gb|ELF32893.1| alanyl-tRNA synthetase [Escherichia coli KTE161]
gi|431241987|gb|ELF36414.1| alanyl-tRNA synthetase [Escherichia coli KTE171]
gi|431280991|gb|ELF71899.1| alanyl-tRNA synthetase [Escherichia coli KTE42]
gi|431419590|gb|ELH01939.1| alanyl-tRNA synthetase [Escherichia coli KTE154]
gi|431466495|gb|ELH46515.1| alanyl-tRNA synthetase [Escherichia coli KTE197]
gi|431563388|gb|ELI36600.1| alanyl-tRNA synthetase [Escherichia coli KTE120]
gi|441604875|emb|CCP98104.1| Alanyl-tRNA synthetase [Escherichia coli O10:K5(L):H4 str. ATCC
23506]
gi|441652942|emb|CCQ01799.1| Alanyl-tRNA synthetase [Escherichia coli O5:K4(L):H4 str. ATCC
23502]
gi|449318268|gb|EMD08342.1| alanyl-tRNA ligase [Escherichia coli S17]
Length = 876
Score = 577 bits (1487), Expect = e-162, Method: Compositional matrix adjust.
Identities = 316/689 (45%), Positives = 437/689 (63%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +I+ +++ + D +N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRTLIQAVAKVTGAT-----DLSNKSLRVIADHIRSCAFLIADGVMP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K F + I++ D+K ++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAKE--------TFFYKLVGPLIDVMGSAGEDLKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGFGADYNAM-IRVDSA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD L V +L V+GK V ++ G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G N AV + + +++G H G + G L+VG V+A VD R R +++H+ATH
Sbjct: 513 KGANFSFAVEDTQKYGQAIG----HIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G SQ GSLV LRFDF+ + + E+ +E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNTQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M L+ AK GA+A+FGEKY E+V++ S
Sbjct: 629 NIMDLEAAKAKGAMALFGEKYDERVRVLS 657
>gi|418774442|ref|ZP_13330411.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 33953]
gi|392751254|gb|EJA08209.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 33953]
Length = 876
Score = 577 bits (1486), Expect = e-162, Method: Compositional matrix adjust.
Identities = 316/689 (45%), Positives = 438/689 (63%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWFALPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +I+ +++ + D N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRTLIEAVAKVTGAT-----DLGNKSLRVIADHIRSCAFLVADGVLP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K F + IE+ ++K ++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAKE--------TFFYKLVGPLIEVMGSAGEELKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLQGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGFGADYNAM-IRVDSA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD L V +L V+GK V ++ G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDHLELNGKVTALFVDGKAVEAINAGQEAVVVLDQTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G AV + + +++G H G + G L+VG V+A VD R R +++H+ATH
Sbjct: 513 KGAGFTFAVDDTQKYGQAIG----HLGKLSAGALKVGDAVQADVDEARRARIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G +Q GSLV+ LRFDF+ + + +E+ E+E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVAQKGSLVSDKVLRFDFSHNEAMKPSEIREVEDLVNAQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M LD AK GA+A+FGEKY E+V++ S
Sbjct: 629 NIMDLDAAKAKGAMALFGEKYDERVRVLS 657
>gi|261210116|ref|ZP_05924414.1| alanyl-tRNA synthetase [Vibrio sp. RC341]
gi|260840881|gb|EEX67423.1| alanyl-tRNA synthetase [Vibrio sp. RC341]
Length = 860
Score = 577 bits (1486), Expect = e-161, Method: Compositional matrix adjust.
Identities = 314/686 (45%), Positives = 434/686 (63%), Gaps = 49/686 (7%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S D +R+ FL F+ S+GH+++ S+SLVP DPT+L T AGM QFK FLG R RA
Sbjct: 4 STDEVRRAFLSFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDCFLGLEKRAYTRAT 63
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
T+QRC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AIQ+AWEF T LP
Sbjct: 64 TAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIQYAWEFLTGVLQLPK 123
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG--------ADDNFWNSGATGPCGPCSE 215
RL ++VYE DDEAF+IWNK+VG+P + I R+G DNFW G TGPCGPC+E
Sbjct: 124 ERLLVTVYETDDEAFDIWNKKVGIPADRIIRIGDKKGGKKFDSDNFWQMGDTGPCGPCTE 183
Query: 216 IYYDFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLER 272
I+YD H D G D RFIE +N VFMQ+N+ DG++EPL + ++DTG+G+ER
Sbjct: 184 IFYD-HGDHIWGGPPGSPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPSVDTGMGIER 242
Query: 273 IARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDG 332
I+ I+Q V +NYE D+ +IK A+E + Y D TN +L+++ DH+R+ +L+ DG
Sbjct: 243 ISAIMQGVHSNYEIDVFQTLIKAAAEA--IGY---QDLTNQSLRVVADHIRSCAFLIVDG 297
Query: 333 VFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVK 392
V PSN GRGYV+RR+IRRAVR G LG +GAF + E+ +++K
Sbjct: 298 VMPSNEGRGYVLRRIIRRAVRHGNKLGA--------QGAFFHKLVGPLAEVMGTAGAELK 349
Query: 393 AREQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTF 452
++ + + L+ EE F +TL+RG +L+ DAL + SG V L G+ F LYDT+
Sbjct: 350 KQQALVEKVLRIEEENFGRTLDRGMSILN----DALDQL--SGQV--LDGETVFKLYDTY 401
Query: 453 GFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEF 512
GFP ++T +VA E G S+D GF+ ME QR Q A A + D ++ L + +TEF
Sbjct: 402 GFPADLTNDVARERGFSIDEAGFEKAMEEQR---QRAREAGQFGTDYNS-LIKSATNTEF 457
Query: 513 LGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGT 572
GY +++V + V G V +S G ++L+ TPFYAESGGQ GD G L G
Sbjct: 458 CGYTASRGQSVVREMFVEGAEVSALSAGDKAIIVLDNTPFYAESGGQCGDTGVLKTEAG- 516
Query: 573 NQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQ 632
+ V+D K LG+ H G + +GVL G +VEAIVD + R ++H+ATHLL
Sbjct: 517 -----IFHVEDTHK-LGNAIAHHGILAQGVLAKGDQVEAIVDEQRRAAISLNHSATHLLH 570
Query: 633 AALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVM 692
AAL+KV+G+ +Q GSLV + LRFDF+ + E++E+ERL+N I + ++T +M
Sbjct: 571 AALRKVLGEHVAQKGSLVRAETLRFDFSHLEAMTAAEIKEVERLVNQEIRRNHHIETHIM 630
Query: 693 ALDDAKRAGAIAMFGEKYGEQVKISS 718
+D+AK GA+A+FGEKY +QV++ S
Sbjct: 631 NIDEAKAKGAMALFGEKYDDQVRVLS 656
>gi|432407726|ref|ZP_19650432.1| alanyl-tRNA synthetase [Escherichia coli KTE28]
gi|430928657|gb|ELC49203.1| alanyl-tRNA synthetase [Escherichia coli KTE28]
Length = 876
Score = 577 bits (1486), Expect = e-161, Method: Compositional matrix adjust.
Identities = 316/689 (45%), Positives = 437/689 (63%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +I+ +++ + D +N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRTLIQAVAKVTGAT-----DLSNKSLRVIADHIRSCAFLIADGVMP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K F + I++ D+K ++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAKE--------TFFYKLVGPLIDVMGSAGEDLKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGFGADYNAM-IRVDSA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD L V +L V+GK V ++ G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDHLELNGKVTALFVDGKSVDAINAGQEAVVVLDQTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G N AV + + +++G H G + G L+VG V+A VD R R +++H+ATH
Sbjct: 513 KGANFSFAVEDTQKYGQAIG----HIGKLAVGSLKVGDAVQADVDEARRARIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G SQ GSLV LRFDF+ + + E+ +E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M L+ AK GA+A+FGEKY E+V++ S
Sbjct: 629 NIMDLEAAKAKGAMALFGEKYDERVRVLS 657
>gi|421350380|ref|ZP_15800746.1| alanyl-tRNA synthetase [Vibrio cholerae HE-25]
gi|395954502|gb|EJH65112.1| alanyl-tRNA synthetase [Vibrio cholerae HE-25]
Length = 860
Score = 577 bits (1486), Expect = e-161, Method: Compositional matrix adjust.
Identities = 315/687 (45%), Positives = 435/687 (63%), Gaps = 51/687 (7%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S D +R+ FL F+ S+GH+++ S+SLVP DPT+L T AGM QFK FLG R RA
Sbjct: 4 STDEVRRAFLSFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDCFLGLEKRAYTRAT 63
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
T+QRC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AIQ+AWEF T LP
Sbjct: 64 TAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIQYAWEFLTDVLQLPK 123
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG--------ADDNFWNSGATGPCGPCSE 215
RL ++VYE DDEAF+IWNK+VG+P + I R+G DNFW G TGPCGPC+E
Sbjct: 124 ERLLVTVYETDDEAFDIWNKKVGIPADRIIRIGDKKGGKKFDSDNFWQMGDTGPCGPCTE 183
Query: 216 IYYDFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLER 272
I+YD H D G D RFIE +N VFMQ+N+ DG++EPL + ++DTG+G+ER
Sbjct: 184 IFYD-HGDHIWGGPPGSPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPSVDTGMGIER 242
Query: 273 IARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDG 332
I+ I+Q V +NYE D+ +IK A++ + Y D TN +L+++ DH+R+ +L+ DG
Sbjct: 243 ISAIMQGVHSNYEIDVFQTLIKAAADA--IGY---QDLTNQSLRVVADHIRSCAFLIVDG 297
Query: 333 VFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVK 392
V PSN GRGYV+RR+IRRAVR G LG +G L G + +EL
Sbjct: 298 VMPSNEGRGYVLRRIIRRAVRHGNKLGAQGAFFHKLVGPLAEVMGTAGVELK-------- 349
Query: 393 AREQRILEELKR-EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDT 451
++Q ++E++ R EE F +TL+RG +L+ DAL + SG V L G+ F LYDT
Sbjct: 350 -KQQALVEKVLRIEEENFGRTLDRGMSILN----DALDQL--SGQV--LDGETVFKLYDT 400
Query: 452 FGFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTE 511
+GFP ++T +VA E G S+D GF+ ME QR Q A A + D ++ L + +TE
Sbjct: 401 YGFPADLTNDVARERGFSIDEAGFEQAMEEQR---QRAREAGQFGTDYNS-LIKSATNTE 456
Query: 512 FLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQG 571
F GY +++V + V G V +S G ++L+ TPFYAESGGQ GD G L G
Sbjct: 457 FCGYTASRGQSVVREMFVEGAEVSTLSAGDKAIIVLDNTPFYAESGGQCGDTGVLKTDAG 516
Query: 572 TNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLL 631
+ V+D +K LG+ H G + +GVL G +V+AIVD K R ++H+ATHLL
Sbjct: 517 ------IFHVEDTQK-LGNAIAHHGVLAQGVLATGDQVDAIVDEKRRAAISLNHSATHLL 569
Query: 632 QAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKV 691
AAL+KV+G+ +Q GSLV + LRFDF+ + E++E+ERL+N I + ++T +
Sbjct: 570 HAALRKVLGEHVAQKGSLVRAETLRFDFSHLEAMTPAEIKEVERLVNQEIRHNHNIETNI 629
Query: 692 MALDDAKRAGAIAMFGEKYGEQVKISS 718
M +D+AK GA+A+FGEKY +QV++ S
Sbjct: 630 MNIDEAKAKGAMALFGEKYDDQVRVLS 656
>gi|448236180|ref|YP_001569241.2| alanyl-tRNA ligase [Salmonella enterica subsp. arizonae serovar
62:z4,z23:- str. RSK2980]
gi|205830248|sp|A9MFZ1.2|SYA_SALAR RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
Length = 876
Score = 577 bits (1486), Expect = e-161, Method: Compositional matrix adjust.
Identities = 316/689 (45%), Positives = 438/689 (63%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWFALPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+ IW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYETDDEAYGIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NYE DL +I+ +++ + D +N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYEIDLFRTLIEAVAKVTGAT-----DLSNKSLRVIADHIRSCAFLVADGVLP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K F + IE+ ++K ++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAKE--------TFFYKLVGPLIEVMGSAGEELKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLQGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERDIKVDEAGFETAMEEQRRRAREASGFGADYNAM-IRVDSA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD L V +L VNGK V ++ G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDHLELNGKVTALFVNGKAVEAINAGQEAVVVLDQTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G AV + + +++G H G + G L+VG V+A VD R R +++H+ATH
Sbjct: 513 KGVGFTFAVNDTQKYGQAIG----HLGKLSAGALKVGDVVQADVDEARRARIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G +Q GSLV+ LRFDF+ + + +E+ E+E L+N I ++T
Sbjct: 569 LMHAALRQVLGAHVAQKGSLVSDKVLRFDFSHNEAMKPSEIREVEDLVNAQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M L+ AK GA+A+FGEKY E+V++ S
Sbjct: 629 HIMELEAAKAKGAMALFGEKYDERVRVLS 657
>gi|229530358|ref|ZP_04419746.1| alanyl-tRNA synthetase [Vibrio cholerae 12129(1)]
gi|229332131|gb|EEN97619.1| alanyl-tRNA synthetase [Vibrio cholerae 12129(1)]
Length = 860
Score = 577 bits (1486), Expect = e-161, Method: Compositional matrix adjust.
Identities = 315/687 (45%), Positives = 435/687 (63%), Gaps = 51/687 (7%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S D +R+ FL F+ S+GH+++ S+SLVP DPT+L T AGM QFK FLG R RA
Sbjct: 4 STDEVRRAFLSFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDCFLGLEKRAYTRAT 63
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
T+QRC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AIQ+AWEF T LP
Sbjct: 64 TAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIQYAWEFLTDVLQLPK 123
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG--------ADDNFWNSGATGPCGPCSE 215
RL ++VYE DDEAF+IWNK+VG+P + I R+G DNFW G TGPCGPC+E
Sbjct: 124 ERLLVTVYETDDEAFDIWNKKVGIPADRIIRIGDKKGGKKFDSDNFWQMGDTGPCGPCTE 183
Query: 216 IYYDFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLER 272
I+YD H D G D RFIE +N VFMQ+N+ DG++EPL + ++DTG+G+ER
Sbjct: 184 IFYD-HGDHIWGGPPGSPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPSVDTGMGIER 242
Query: 273 IARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDG 332
I+ I+Q V +NYE D+ +IK A++ + Y D TN +L+++ DH+R+ +L+ DG
Sbjct: 243 ISAIMQGVHSNYEIDVFQTLIKAAADA--IGY---QDLTNQSLRVVADHIRSCAFLIVDG 297
Query: 333 VFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVK 392
V PSN GRGYV+RR+IRRAVR G LG +G L G + +EL
Sbjct: 298 VMPSNEGRGYVLRRIIRRAVRHGNKLGAQGAFFHKLVGPLAEVMGTAGVELK-------- 349
Query: 393 AREQRILEELKR-EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDT 451
++Q ++E++ R EE F +TL+RG +L+ DAL + SG V L G+ F LYDT
Sbjct: 350 -KQQALVEKVLRIEEENFGRTLDRGMSILN----DALDQL--SGQV--LDGETVFKLYDT 400
Query: 452 FGFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTE 511
+GFP ++T +VA E G S+D GF+ ME QR Q A A + D ++ L + +TE
Sbjct: 401 YGFPADLTNDVARERGFSIDEAGFEQAMEEQR---QRAREAGQFGTDYNS-LIKSATNTE 456
Query: 512 FLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQG 571
F GY +++V + V G V +S G ++L+ TPFYAESGGQ GD G L G
Sbjct: 457 FCGYTASRGQSVVREMFVEGAEVSTLSAGDKAIIVLDNTPFYAESGGQCGDTGVLKTDAG 516
Query: 572 TNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLL 631
+ V+D +K LG+ H G + +GVL G +V+AIVD K R ++H+ATHLL
Sbjct: 517 ------IFHVEDTQK-LGNAIAHHGVLAQGVLATGDQVDAIVDEKRRAAISLNHSATHLL 569
Query: 632 QAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKV 691
AAL+KV+G+ +Q GSLV + LRFDF+ + E++E+ERL+N I + ++T +
Sbjct: 570 HAALRKVLGEHVAQKGSLVRAETLRFDFSHLEAMTPAEIKEVERLVNQEIRHNHNIETNI 629
Query: 692 MALDDAKRAGAIAMFGEKYGEQVKISS 718
M +D+AK GA+A+FGEKY +QV++ S
Sbjct: 630 MNIDEAKAKGAMALFGEKYDDQVRVLS 656
>gi|153826924|ref|ZP_01979591.1| alanyl-tRNA synthetase [Vibrio cholerae MZO-2]
gi|254291229|ref|ZP_04962025.1| alanyl-tRNA synthetase [Vibrio cholerae AM-19226]
gi|417823672|ref|ZP_12470264.1| alanyl-tRNA synthetase [Vibrio cholerae HE48]
gi|149739227|gb|EDM53495.1| alanyl-tRNA synthetase [Vibrio cholerae MZO-2]
gi|150422923|gb|EDN14874.1| alanyl-tRNA synthetase [Vibrio cholerae AM-19226]
gi|340048301|gb|EGR09223.1| alanyl-tRNA synthetase [Vibrio cholerae HE48]
Length = 860
Score = 577 bits (1486), Expect = e-161, Method: Compositional matrix adjust.
Identities = 315/687 (45%), Positives = 435/687 (63%), Gaps = 51/687 (7%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S D +R+ FL F+ S+GH+++ S+SLVP DPT+L T AGM QFK FLG R RA
Sbjct: 4 STDEVRRAFLSFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDCFLGLEKRAYTRAT 63
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
T+QRC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AIQ+AWEF T LP
Sbjct: 64 TAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIQYAWEFLTDVLQLPK 123
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG--------ADDNFWNSGATGPCGPCSE 215
RL ++VYE DDEAF+IWNK+VG+P + I R+G DNFW G TGPCGPC+E
Sbjct: 124 ERLLVTVYETDDEAFDIWNKKVGIPADRIIRIGDKKGGKKFDSDNFWQMGDTGPCGPCTE 183
Query: 216 IYYDFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLER 272
I+YD H D G D RFIE +N VFMQ+N+ DG++EPL + ++DTG+G+ER
Sbjct: 184 IFYD-HGDHIWGGPPGSPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPSVDTGMGIER 242
Query: 273 IARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDG 332
I+ I+Q V +NYE D+ +IK A++ + Y D TN +L+++ DH+R+ +L+ DG
Sbjct: 243 ISAIMQGVHSNYEIDVFQTLIKAAADA--IGY---QDLTNQSLRVVADHIRSCAFLIVDG 297
Query: 333 VFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVK 392
V PSN GRGYV+RR+IRRAVR G LG +G L G + +EL
Sbjct: 298 VMPSNEGRGYVLRRIIRRAVRHGNKLGAQGAFFHKLVGPLAEVMGTAGVELK-------- 349
Query: 393 AREQRILEELKR-EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDT 451
++Q ++E++ R EE F +TL+RG +L+ DAL + SG V L G+ F LYDT
Sbjct: 350 -KQQALVEKVLRIEEENFGRTLDRGMSILN----DALDQL--SGQV--LDGETVFKLYDT 400
Query: 452 FGFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTE 511
+GFP ++T +VA E G S+D GF+ ME QR Q A A + D ++ L + +TE
Sbjct: 401 YGFPADLTNDVARERGFSIDEAGFEQAMEEQR---QRAREAGQFGTDYNS-LIKSATNTE 456
Query: 512 FLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQG 571
F GY +++V + V G V +S G ++L+ TPFYAESGGQ GD G L G
Sbjct: 457 FCGYTASRGQSVVREMFVEGAEVSTLSAGDKAIIVLDNTPFYAESGGQCGDTGVLKTDAG 516
Query: 572 TNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLL 631
+ V+D +K LG+ H G + +GVL G +V+AIVD K R ++H+ATHLL
Sbjct: 517 ------IFHVEDTQK-LGNAIAHHGVLAQGVLATGDQVDAIVDEKRRAAISLNHSATHLL 569
Query: 632 QAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKV 691
AAL+KV+G+ +Q GSLV + LRFDF+ + E++E+ERL+N I + ++T +
Sbjct: 570 HAALRKVLGEHVAQKGSLVRAETLRFDFSHLEAMTPAEIKEVERLVNQEIRHNHNIETNI 629
Query: 692 MALDDAKRAGAIAMFGEKYGEQVKISS 718
M +D+AK GA+A+FGEKY +QV++ S
Sbjct: 630 MNIDEAKAKGAMALFGEKYDDQVRVLS 656
>gi|331654174|ref|ZP_08355174.1| alanine--tRNA ligase [Escherichia coli M718]
gi|331047556|gb|EGI19633.1| alanine--tRNA ligase [Escherichia coli M718]
Length = 876
Score = 577 bits (1486), Expect = e-161, Method: Compositional matrix adjust.
Identities = 315/689 (45%), Positives = 437/689 (63%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +I+ +++ + D +N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRTLIQAVAKVTGAT-----DLSNKSLRVIADHIRSCAFLIADGVMP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K F + I++ D+K ++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAKE--------TFFYKLVGPLIDVMGSAGEDLKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGFGADYNAM-IRVDSA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD L V +L V+GK V ++ G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G N AV + + +++G H G + G L+VG V+A VD R R +++H+ATH
Sbjct: 513 KGANFSFAVEDTQKYGQAIG----HIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G +Q GSLV LRFDF+ + + E+ +E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVTQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M L+ AK GA+A+FGEKY E+V++ S
Sbjct: 629 NIMDLEAAKAKGAMALFGEKYDERVRVLS 657
>gi|432617857|ref|ZP_19853967.1| alanyl-tRNA synthetase [Escherichia coli KTE75]
gi|431152749|gb|ELE53675.1| alanyl-tRNA synthetase [Escherichia coli KTE75]
Length = 876
Score = 576 bits (1485), Expect = e-161, Method: Compositional matrix adjust.
Identities = 315/683 (46%), Positives = 432/683 (63%), Gaps = 50/683 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +I+ +++ + D +N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRTLIQAVAKVTGAT-----DLSNKSLRVIADHIRSCAFLIADGVMP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K F + I++ D+K ++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAKE--------TFFYKLVGPLIDVMGSAGEDLKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGY 515
V++T +V E + VD GF+ ME QRR+ A A D +A + +EF GY
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRR---AREASGFGADYNA-MIRVNSASEFKGY 461
Query: 516 DTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
D L V +L V+GK V ++ G + V+L++TPFYAESGGQ+GD G L +G N
Sbjct: 462 DHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGEL---KGANFS 518
Query: 576 TAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAAL 635
AV + + +++G H G + G L+VG V+A VD R R +++H+ATHL+ AAL
Sbjct: 519 FAVEDTQKYGQAIG----HIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATHLMHAAL 574
Query: 636 KKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALD 695
++V+G SQ GSLV LRFDF+ + + E+ +E L+N I ++T +M L+
Sbjct: 575 RQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNLPIETNIMDLE 634
Query: 696 DAKRAGAIAMFGEKYGEQVKISS 718
AK GA+A+FGEKY E+V++ S
Sbjct: 635 AAKAKGAMALFGEKYDERVRVLS 657
>gi|432393137|ref|ZP_19635966.1| alanyl-tRNA synthetase [Escherichia coli KTE21]
gi|430917400|gb|ELC38447.1| alanyl-tRNA synthetase [Escherichia coli KTE21]
Length = 876
Score = 576 bits (1485), Expect = e-161, Method: Compositional matrix adjust.
Identities = 315/689 (45%), Positives = 436/689 (63%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +I+ +++ + D +N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRTLIQAVAKVTGAT-----DLSNKSLRVIADHIRSCAFLIADGVMP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G + G K F + I++ D+K ++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMFGAKE--------TFFYKLVGPLIDVMGSAGEDLKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGFGADYNAM-IRVDSA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD L V +L V+GK V ++ G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G N AV + + +++G H G + G L+VG V+A VD R R +++H+ATH
Sbjct: 513 KGANFSFAVEDTQKYGQAIG----HIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G SQ GSLV LRFDF+ + + E+ +E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M L+ AK GA+A+FGEKY E+V++ S
Sbjct: 629 NIMDLEAAKAKGAMALFGEKYDERVRVLS 657
>gi|62181330|ref|YP_217747.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|375115667|ref|ZP_09760837.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SCSA50]
gi|75481392|sp|Q57KU6.1|SYA_SALCH RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|62128963|gb|AAX66666.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|322715813|gb|EFZ07384.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SCSA50]
Length = 876
Score = 576 bits (1485), Expect = e-161, Method: Compositional matrix adjust.
Identities = 316/689 (45%), Positives = 438/689 (63%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVSSSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWFALPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGAMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +I+ +++ + D N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRTLIEAVAKVTGAT-----DLGNKSLRVIADHIRSCAFLVADGVLP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K F + IE+ ++K ++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAKE--------TFFYKLVGPLIEVMGSAGEELKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLQGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGFGADYNAM-IRVDSA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD L V +L V+GK V ++ G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDHLELNGKVTALFVDGKAVEVINAGQEAVVVLDQTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G AV + + +++G H G + G L+VG V+A VD R R +++H+ATH
Sbjct: 513 KGAGFTFAVDDTQKYGQAIG----HLGKLSAGALKVGDAVQADVDEARRARIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G +Q GSLV+ LRFDF+ + + +E+ E+E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVAQKGSLVSDKVLRFDFSHNEAMKPSEIREVEDLVNAQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M LD AK GA+A+FGEKY E+V++ S
Sbjct: 629 NIMDLDAAKAKGAMALFGEKYDERVRVLS 657
>gi|297580680|ref|ZP_06942606.1| alanyl-tRNA synthetase [Vibrio cholerae RC385]
gi|297535096|gb|EFH73931.1| alanyl-tRNA synthetase [Vibrio cholerae RC385]
Length = 860
Score = 576 bits (1485), Expect = e-161, Method: Compositional matrix adjust.
Identities = 315/687 (45%), Positives = 434/687 (63%), Gaps = 51/687 (7%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S D +R+ FL F+ S+GH+++ S+SLVP DPT+L T AGM QFK FLG R RA
Sbjct: 4 STDEVRRAFLSFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDCFLGLEKRAYTRAT 63
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
T+QRC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AIQ+AWEF T LP
Sbjct: 64 TAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIQYAWEFLTDVLQLPK 123
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG--------ADDNFWNSGATGPCGPCSE 215
RL ++VYE DDEAF+IWNK+VG+P + I R+G DNFW G TGPCGPC+E
Sbjct: 124 ERLLVTVYETDDEAFDIWNKKVGIPADRIIRIGDKKGGKKFDSDNFWQMGDTGPCGPCTE 183
Query: 216 IYYDFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLER 272
I+YD H D G D RFIE +N VFMQ+N+ DG++EPL + ++DTG+G+ER
Sbjct: 184 IFYD-HGDHIWGGPPGSPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPSVDTGMGIER 242
Query: 273 IARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDG 332
I+ I+Q V +NYE D+ +IK A++ + Y D TN +L+++ DH+R+ +L+ DG
Sbjct: 243 ISAIMQGVHSNYEIDVFQTLIKAAADA--IGY---QDLTNQSLRVVADHIRSCAFLIVDG 297
Query: 333 VFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVK 392
V PSN GRGYV+RR+IRRAVR G LG +G L G + EL
Sbjct: 298 VMPSNEGRGYVLRRIIRRAVRHGNKLGAQGASFHKLVGPLAEVMGTAGAELK-------- 349
Query: 393 AREQRILEELKR-EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDT 451
++Q ++E++ R EE F +TL+RG +L+ DAL + SG V L G+ F LYDT
Sbjct: 350 -KQQALVEKVLRIEEENFGRTLDRGMSILN----DALDQL--SGQV--LDGETVFKLYDT 400
Query: 452 FGFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTE 511
+GFP ++T +VA E G S+D GF+ ME QR Q A A + D ++ L + +TE
Sbjct: 401 YGFPADLTNDVARERGFSIDEAGFEQAMEEQR---QRAREAGQFGTDYNS-LIKSATNTE 456
Query: 512 FLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQG 571
F GY +++V + V G V +S G ++L+ TPFYAESGGQ GD G L G
Sbjct: 457 FCGYTASRGQSVVREMFVEGAEVSTLSAGDKAIIVLDNTPFYAESGGQCGDTGVLKTDAG 516
Query: 572 TNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLL 631
+ V+D +K LG+ H G + +GVL G +V+AIVD K R ++H+ATHLL
Sbjct: 517 ------IFHVEDTQK-LGNAIAHHGVLAQGVLATGDQVDAIVDEKRRAAISLNHSATHLL 569
Query: 632 QAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKV 691
AAL+KV+G+ +Q GSLV + LRFDF+ + E++E+ERL+N I + ++T +
Sbjct: 570 HAALRKVLGEHVAQKGSLVRAETLRFDFSHLEAMTPAEIKEVERLVNQEIRHNHNIETNI 629
Query: 692 MALDDAKRAGAIAMFGEKYGEQVKISS 718
M +D+AK GA+A+FGEKY +QV++ S
Sbjct: 630 MNIDEAKAKGAMALFGEKYDDQVRVLS 656
>gi|422835922|ref|ZP_16883973.1| alanyl-tRNA synthetase [Escherichia coli E101]
gi|371611289|gb|EHN99813.1| alanyl-tRNA synthetase [Escherichia coli E101]
Length = 876
Score = 576 bits (1485), Expect = e-161, Method: Compositional matrix adjust.
Identities = 315/689 (45%), Positives = 436/689 (63%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +I+ +++ + D +N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRTLIQAVAKVTGAT-----DLSNKSLRVIADHIRSCAFLIADGVMP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K F + I++ D+K ++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAKE--------TFFYKLVGPLIDVMGSAGEDLKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGFGADYNAM-IRVDSA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD L V +L V+GK V ++ G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G N V + + +++G H G + G L+VG V+A VD R R +++H+ATH
Sbjct: 513 KGANFSFVVEDTQKYGQAIG----HIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G SQ GSLV LRFDF+ + + E+ +E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M L+ AK GA+A+FGEKY E+V++ S
Sbjct: 629 NIMDLEAAKAKGAMALFGEKYDERVRVLS 657
>gi|262164028|ref|ZP_06031767.1| alanyl-tRNA synthetase [Vibrio mimicus VM223]
gi|262027556|gb|EEY46222.1| alanyl-tRNA synthetase [Vibrio mimicus VM223]
Length = 860
Score = 576 bits (1485), Expect = e-161, Method: Compositional matrix adjust.
Identities = 316/687 (45%), Positives = 435/687 (63%), Gaps = 51/687 (7%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S D +R+ FL F+ S+GH+++ S+SLVP DPT+L T AGM QFK FLG R RA
Sbjct: 4 STDEVRRAFLSFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDCFLGLEKRAYTRAT 63
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
T+QRC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AIQ+AWEF T LP
Sbjct: 64 TAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIQYAWEFLTGVLQLPK 123
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG--------ADDNFWNSGATGPCGPCSE 215
RL ++VYE DDEAF+IWNK+VG+P + I R+G DNFW G TGPCGPC+E
Sbjct: 124 ERLLVTVYETDDEAFDIWNKKVGIPADRIIRIGDKKGGKKFDSDNFWQMGDTGPCGPCTE 183
Query: 216 IYYDFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLER 272
I+YD H D G D RFIE +N VFMQ+N+ DG++EPL + ++DTG+G+ER
Sbjct: 184 IFYD-HGDHIWGGPPGSPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPSVDTGMGIER 242
Query: 273 IARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDG 332
I+ I+Q V +NYE D+ +IK A++ + Y D TN +L+++ DH+R+ +L+ DG
Sbjct: 243 ISAIMQGVHSNYEIDVFQTLIKAAADA--IGY---QDLTNQSLRVVADHIRSCAFLIVDG 297
Query: 333 VFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVK 392
V PSN GRGYV+RR+IRRAVR G LG +G L G + +EL
Sbjct: 298 VMPSNEGRGYVLRRIIRRAVRHGNKLGAQGAFFHKLVGPLAEVMGTAGVELK-------- 349
Query: 393 AREQRILEELKR-EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDT 451
++Q ++E++ R EE F +TL+RG +L++ L D L SG V L G+ F LYDT
Sbjct: 350 -KQQALVEKVLRIEEENFGRTLDRGMSILNEAL-DQL-----SGQV--LDGETVFKLYDT 400
Query: 452 FGFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTE 511
+GFP ++T +VA E G S+D GF+ ME QR Q A A + D ++ L + +TE
Sbjct: 401 YGFPADLTNDVARERGFSIDETGFEQAMEEQR---QRAREAGQFGTDYNS-LIKSATNTE 456
Query: 512 FLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQG 571
F GY +++V + V G V +S G ++L+ TPFYAESGGQ GD G L G
Sbjct: 457 FCGYTASRGQSVVREIFVEGAEVSALSAGDKAIIVLDNTPFYAESGGQCGDTGVLKTEAG 516
Query: 572 TNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLL 631
V V+D K LG+ H G + +GVL G +V+AIVD + R ++H+ATHLL
Sbjct: 517 ------VFHVEDTHK-LGNAIAHHGVLAQGVLAKGDQVDAIVDEQRRAAISLNHSATHLL 569
Query: 632 QAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKV 691
AAL+KV+G+ +Q GSLV + LRFDF+ + TE++E+ERL+N I + ++T +
Sbjct: 570 HAALRKVLGEHVAQKGSLVRAETLRFDFSHLEAMTATEIKEVERLVNQEIRRNHSIETNI 629
Query: 692 MALDDAKRAGAIAMFGEKYGEQVKISS 718
M +D+AK GA+A+FGEKY +QV++ S
Sbjct: 630 MNIDEAKAKGAMALFGEKYDDQVRVLS 656
>gi|452123349|ref|YP_007473597.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Javiana str. CFSAN001992]
gi|451912353|gb|AGF84159.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Javiana str. CFSAN001992]
Length = 876
Score = 576 bits (1485), Expect = e-161, Method: Compositional matrix adjust.
Identities = 314/688 (45%), Positives = 437/688 (63%), Gaps = 60/688 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWFALPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DF--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARI 276
D H G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA +
Sbjct: 188 DHGEHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAAV 247
Query: 277 LQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPS 336
LQ V +NY+ DL +I+ +++ + D N +L++I DH+R+ +L++DGV PS
Sbjct: 248 LQHVNSNYDIDLFRTLIEAVAKVTGAT-----DLGNKSLRVIADHIRSCAFLVADGVLPS 302
Query: 337 NIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQ 396
N RGYV+RR+IRRAVR G +LG K F + IE+ ++K ++
Sbjct: 303 NENRGYVLRRIIRRAVRHGNMLGAKE--------TFFYKLVGPLIEVMGSAGEELKRQQA 354
Query: 397 RILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPV 456
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFPV
Sbjct: 355 QVEQVLKTEEEQFARTLERGLALLDEELAKLQGDT--------LDGETAFRLYDTYGFPV 406
Query: 457 EITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAEKIPDT 510
++T +V E + VD GF+ ME QRR+++ A +NA+ + VD + +
Sbjct: 407 DLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGFGADYNAM-IRVDSA---------S 456
Query: 511 EFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQ 570
EF GYD L V +L V+GK V ++ G + V+L+RTPFYAESGGQ+GD G L +
Sbjct: 457 EFKGYDHLELNGKVTALFVDGKAVEAINAGQEAVVVLDRTPFYAESGGQVGDKGEL---K 513
Query: 571 GTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHL 630
G AV + + +++G H G + G L+VG V+A VD R R +++H+ATHL
Sbjct: 514 GAGFTFAVDDTQKYGQAIG----HLGKLSAGALKVGDAVQADVDEARRARIRLNHSATHL 569
Query: 631 LQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTK 690
+ AAL++V+G +Q GSLV+ LRFDF+ + + +E+ ++E L+N I ++T
Sbjct: 570 MHAALRQVLGTHVAQKGSLVSDKVLRFDFSHNEAMKPSEIRQVEDLVNAQIRRNLPIETN 629
Query: 691 VMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M LD A+ GA+A+FGEKY E+V++ S
Sbjct: 630 IMDLDAARAKGAMALFGEKYDERVRVLS 657
>gi|238909593|ref|ZP_04653430.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Tennessee str. CDC07-0191]
Length = 876
Score = 576 bits (1485), Expect = e-161, Method: Compositional matrix adjust.
Identities = 315/689 (45%), Positives = 438/689 (63%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWFALPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +I+ +++ + D N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRTLIEAVAKVTGAT-----DLGNKSLRVIADHIRSCAFLVADGVLP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K F + IE+ ++K ++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAKE--------TFFYKLVGPLIEVMGSAGEELKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLQGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGFGADYNAM-IRVDSA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD L V +L V+GK V ++ G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDHLELNGKVTALFVDGKAVEAINAGQEAVVVLDQTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G AV + + +++G H G + G L+VG V+A VD R R +++H+ATH
Sbjct: 513 KGAGFTFAVDDTQKYGQAIG----HLGKLSAGALKVGDAVQADVDEARRARIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G +Q GSLV+ LRFDF+ + + +E+ E+E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVAQKGSLVSDKVLRFDFSHNEAMKPSEIREVEDLVNAQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M LD A+ GA+A+FGEKY E+V++ S
Sbjct: 629 NIMDLDAARAKGAMALFGEKYDERVRVLS 657
>gi|204928130|ref|ZP_03219330.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Javiana str. GA_MM04042433]
gi|204322452|gb|EDZ07649.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Javiana str. GA_MM04042433]
Length = 876
Score = 576 bits (1485), Expect = e-161, Method: Compositional matrix adjust.
Identities = 314/688 (45%), Positives = 437/688 (63%), Gaps = 60/688 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWFALPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DF--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARI 276
D H G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA +
Sbjct: 188 DHGEHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAAV 247
Query: 277 LQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPS 336
LQ V +NY+ DL +I+ +++ + D N +L++I DH+R+ +L++DGV PS
Sbjct: 248 LQHVNSNYDIDLFRTLIEAVAKVTGAT-----DLGNKSLRVIADHIRSCAFLVADGVLPS 302
Query: 337 NIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQ 396
N RGYV+RR+IRRAVR G +LG K F + IE+ ++K ++
Sbjct: 303 NENRGYVLRRIIRRAVRHGNMLGAKE--------TFFYKLVGPLIEVMGSAGEELKRQQA 354
Query: 397 RILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPV 456
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFPV
Sbjct: 355 QVEQVLKTEEEQFARTLERGLALLDEELAKLQGDT--------LDGETAFRLYDTYGFPV 406
Query: 457 EITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAEKIPDT 510
++T +V E + VD GF+ ME QRR+++ A +NA+ + VD + +
Sbjct: 407 DLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGFGADYNAM-IRVDSA---------S 456
Query: 511 EFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQ 570
EF GYD L V +L V+GK V ++ G + V+L+RTPFYAESGGQ+GD G L +
Sbjct: 457 EFKGYDHLELNGKVTALFVDGKAVEAINAGQEAVVVLDRTPFYAESGGQVGDKGEL---K 513
Query: 571 GTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHL 630
G AV + + +++G H G + G L+VG V+A VD R R +++H+ATHL
Sbjct: 514 GAGFTFAVDDTQKYGQAIG----HLGKLSAGALKVGDAVQADVDEARRARIRLNHSATHL 569
Query: 631 LQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTK 690
+ AAL++V+G +Q GSLV+ LRFDF+ + + +E+ ++E L+N I ++T
Sbjct: 570 MHAALRQVLGTHVAQKGSLVSDKVLRFDFSHNEAMKPSEIRQVEDLVNAQIRRNLPIETN 629
Query: 691 VMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M LD A+ GA+A+FGEKY E+V++ S
Sbjct: 630 IMDLDAARAKGAMALFGEKYDERVRVLS 657
>gi|432802880|ref|ZP_20036836.1| alanyl-tRNA synthetase [Escherichia coli KTE84]
gi|431347409|gb|ELG34297.1| alanyl-tRNA synthetase [Escherichia coli KTE84]
Length = 876
Score = 576 bits (1484), Expect = e-161, Method: Compositional matrix adjust.
Identities = 315/689 (45%), Positives = 437/689 (63%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +I+ +++ + D +N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRTLIQAVAKVTGAT-----DLSNKSLRVIADHIRSCAFLIADGVMP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K F + I++ D+K ++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAKE--------TFFYKLVGPLIDVMGSAGEDLKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGFGADYNAM-IRVDSA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD L V +L V+GK V ++ G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDHLELNGKVTALFVDGKSVDAINAGQEAVVVLDQTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G N AV + + +++G H G + G L+VG V+A VD R R +++H+ATH
Sbjct: 513 KGANFSFAVEDTQKYGQAIG----HIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G SQ GSLV LRFDF+ + + ++ +E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEDIRAVEDLVNAQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M L+ AK GA+A+FGEKY E+V++ S
Sbjct: 629 NIMDLEAAKAKGAMALFGEKYDERVRVLS 657
>gi|147675089|ref|YP_001216045.1| alanyl-tRNA synthetase [Vibrio cholerae O395]
gi|227116921|ref|YP_002818817.1| alanyl-tRNA synthetase [Vibrio cholerae O395]
gi|229520840|ref|ZP_04410262.1| alanyl-tRNA synthetase [Vibrio cholerae TM 11079-80]
gi|262169855|ref|ZP_06037545.1| alanyl-tRNA synthetase [Vibrio cholerae RC27]
gi|421353359|ref|ZP_15803692.1| alanyl-tRNA synthetase [Vibrio cholerae HE-45]
gi|424589796|ref|ZP_18029243.1| alanyl-tRNA synthetase [Vibrio cholerae CP1037(10)]
gi|205830284|sp|A5F9B7.1|SYA_VIBC3 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|146316972|gb|ABQ21511.1| alanyl-tRNA synthetase [Vibrio cholerae O395]
gi|227012371|gb|ACP08581.1| alanyl-tRNA synthetase [Vibrio cholerae O395]
gi|229342073|gb|EEO07069.1| alanyl-tRNA synthetase [Vibrio cholerae TM 11079-80]
gi|262021589|gb|EEY40300.1| alanyl-tRNA synthetase [Vibrio cholerae RC27]
gi|395954706|gb|EJH65315.1| alanyl-tRNA synthetase [Vibrio cholerae HE-45]
gi|408036485|gb|EKG72915.1| alanyl-tRNA synthetase [Vibrio cholerae CP1037(10)]
Length = 860
Score = 576 bits (1484), Expect = e-161, Method: Compositional matrix adjust.
Identities = 314/687 (45%), Positives = 435/687 (63%), Gaps = 51/687 (7%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S D +R+ FL F+ S+GH+++ S+SLVP DPT+L T AGM QFK FLG R RA
Sbjct: 4 STDEVRRAFLSFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDCFLGLEKRAYTRAT 63
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
T+QRC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AIQ+AWEF T LP
Sbjct: 64 TAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIQYAWEFLTDVLQLPK 123
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG--------ADDNFWNSGATGPCGPCSE 215
RL ++VYE DDEAF+IWNK+VG+P + I R+G DNFW G TGPCGPC+E
Sbjct: 124 ERLLVTVYETDDEAFDIWNKKVGIPADRIIRIGDKKGGKKFDSDNFWQMGDTGPCGPCTE 183
Query: 216 IYYDFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLER 272
I+YD H D G D RFIE +N VFMQ+N+ DG++EPL + ++DTG+G+ER
Sbjct: 184 IFYD-HGDHIWGGPPGSPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPSVDTGMGIER 242
Query: 273 IARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDG 332
I+ I+Q V +NYE D+ +IK A++ + Y D TN +L+++ DH+R+ +L+ DG
Sbjct: 243 ISAIMQGVHSNYEIDVFQTLIKAAADA--IGY---QDLTNQSLRVVADHIRSCAFLIVDG 297
Query: 333 VFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVK 392
V PSN GRGYV+RR+IRRAVR G LG +G L G + +EL
Sbjct: 298 VMPSNEGRGYVLRRIIRRAVRHGNKLGAQGAFFHKLVGPLAEVMGTAGVELK-------- 349
Query: 393 AREQRILEELKR-EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDT 451
++Q ++E++ R EE F +TL+RG +L+ DAL + SG V L G+ F LYDT
Sbjct: 350 -KQQALVEKVLRIEEENFGRTLDRGMSILN----DALDQL--SGQV--LDGETVFKLYDT 400
Query: 452 FGFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTE 511
+GFP ++T +VA E G S+D GF+ ME QR Q A A + D ++ L + +TE
Sbjct: 401 YGFPADLTNDVARERGFSIDEAGFEQAMEEQR---QRAREAGQFGTDYNS-LIKSATNTE 456
Query: 512 FLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQG 571
F GY +++V + V G V +S G ++L+ TPFYAESGGQ GD G L G
Sbjct: 457 FCGYTASRGQSVVREMFVEGAEVSTLSAGDKAIIVLDNTPFYAESGGQCGDTGVLKTDAG 516
Query: 572 TNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLL 631
+ V+D +K LG+ H G + +GVL G +V+AIVD K R ++H+ATHLL
Sbjct: 517 ------IFHVEDTQK-LGNAIAHHGVLAQGVLATGDQVDAIVDEKRRAAISLNHSATHLL 569
Query: 632 QAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKV 691
AAL+KV+G+ +Q GSLV + LRFDF+ + E++E+ERL+N + + ++T +
Sbjct: 570 HAALRKVLGEHVAQKGSLVRAETLRFDFSHLEAMTAAEIKEVERLVNQEVRRNHSIETNI 629
Query: 692 MALDDAKRAGAIAMFGEKYGEQVKISS 718
M +D+AK GA+A+FGEKY +QV++ S
Sbjct: 630 MNIDEAKAKGAMALFGEKYDDQVRVLS 656
>gi|167550339|ref|ZP_02344096.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA29]
gi|205324713|gb|EDZ12552.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA29]
Length = 876
Score = 576 bits (1484), Expect = e-161, Method: Compositional matrix adjust.
Identities = 316/689 (45%), Positives = 438/689 (63%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWFALPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +I+ +++ + D N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRTLIEAVAKVTGAT-----DLGNKSLRVIADHIRSCAFLVADGVLP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K F + IE+ ++K ++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAKE--------TFFYKLVGPLIEVMGSAGEELKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLQGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGFGADYNAM-IRVDSA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD L V +L V+GK V ++ G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDHLELNGKVTALFVDGKAVEAINAGQEAVVVLDQTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G AV + + +++G H G + G L+VG V+A VD R R +++H+ATH
Sbjct: 513 KGAGFTFAVDDTQKYGQAIG----HLGKLSAGALKVGDAVQADVDEARRARIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G +Q GSLV+ LRFDF+ + + +E+ E+E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVAQKGSLVSDKVLRFDFSHNEAMKLSEIREVEDLVNAQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M LD AK GA+A+FGEKY E+V++ S
Sbjct: 629 NIMDLDAAKAKGAMALFGEKYDERVRVLS 657
>gi|170717275|ref|YP_001784390.1| alanyl-tRNA synthetase [Haemophilus somnus 2336]
gi|205830062|sp|B0UTE1.1|SYA_HAES2 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|168825404|gb|ACA30775.1| alanyl-tRNA synthetase [Haemophilus somnus 2336]
Length = 874
Score = 576 bits (1484), Expect = e-161, Method: Compositional matrix adjust.
Identities = 316/680 (46%), Positives = 433/680 (63%), Gaps = 48/680 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+++ S+SLVPE DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 7 IRQAFLDFFHSKGHQIVDSSSLVPENDPTLLFTNAGMNQFKDVFLGLDTRSYTRATTAQR 66
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI++AWEF T GLP +
Sbjct: 67 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAIKFAWEFLTSPEWLGLPEEK 126
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
L+++VYE DDEA+ IW+K VGVP HI R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 127 LYVTVYETDDEAYGIWHKGVGVPENHIIRIGDNKGAPYASDNFWAMGDTGPCGPCTEIFY 186
Query: 219 DF--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARI 276
D H G + D R+IE +N+VFMQ+N+ DG++E L + ++DTG+GLERI+ +
Sbjct: 187 DHGEHVWGGLPGSEEEDGDRYIEVWNIVFMQFNRLADGTMEKLPKPSVDTGMGLERISAV 246
Query: 277 LQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPS 336
+Q V +NY+ D+ +I K +EL D TN +L++I DH+R+ YL+ DGV PS
Sbjct: 247 IQHVNSNYDIDIFQKLIAKVAELTG-----EKDLTNKSLRVIADHIRSCAYLIVDGVIPS 301
Query: 337 NIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQ 396
N GRGYV+RR+IRRAVR G LLG K F + I++ DVKA++
Sbjct: 302 NEGRGYVLRRIIRRAVRHGHLLGAKD--------TFFYKLVPVLIDVMATAGKDVKAKQA 353
Query: 397 RILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPV 456
+ + L+ EE +F +TLERG LLD+ L + LSG+ AF LYDT+GFP+
Sbjct: 354 NVEKLLRLEEEQFARTLERGLALLDEALINVKDGV--------LSGEVAFKLYDTYGFPL 405
Query: 457 EITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYD 516
++T +V E + +D +GF+ EME QR ++QAA + VD + ++ T F GY
Sbjct: 406 DLTADVCRERNIRIDEEGFEREMEVQRLRAQAAS---RFGVDYN-NVIRVEGTTTFEGYT 461
Query: 517 TLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQT 576
+A V +L GK V +S G V+L+ TPFYAESGGQIGD G L T
Sbjct: 462 EAETQAKVTALFYEGKSVESISAGQSAVVILDDTPFYAESGGQIGDRGCLIATN------ 515
Query: 577 AVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALK 636
+VKD +K G VF H GT+ +G L VG+ + A+VD + R + ++H+ATHLL AAL+
Sbjct: 516 MRFDVKDTQK-YGQVFGHIGTLIQGTLNVGQTINAVVDTEHRIKTSLNHSATHLLHAALR 574
Query: 637 KVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDD 696
+V+G +Q GSLV+ LRFDF + +L EIE L+N I +L+ T+VM +D+
Sbjct: 575 QVLGSHVAQKGSLVSDTILRFDFAQPEAISQEQLFEIECLVNQHIRANHLVVTEVMPIDE 634
Query: 697 AKRAGAIAMFGEKYGEQVKI 716
AK GA+A+FGEKYG+ V++
Sbjct: 635 AKAKGAMALFGEKYGDVVRV 654
>gi|433169638|ref|ZP_20354261.1| alanyl-tRNA synthetase [Escherichia coli KTE180]
gi|431685914|gb|ELJ51480.1| alanyl-tRNA synthetase [Escherichia coli KTE180]
Length = 876
Score = 576 bits (1484), Expect = e-161, Method: Compositional matrix adjust.
Identities = 316/689 (45%), Positives = 436/689 (63%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +I+ +++ + D +N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRTLIQAVAKVTGAT-----DLSNKSLRVIADHIRSCAFLIADGVMP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K F + I++ D+K ++
Sbjct: 302 SNESRGYVLRRIIRRAVRHGNMLGAKE--------TFFYKLVGPLIDVMGSAGEDLKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD FD ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEACFDAAMEEQRRRAREASGFGADYNAM-IRVDSA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD L V +L V+GK V ++ G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G N AV + + +++G H G + G L+VG V+A VD R R +++H+ATH
Sbjct: 513 KGANFSFAVEDTQKYGQAIG----HIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G SQ GSLV LRFDF+ + + E+ +E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M L+ AK GA+A+FGEKY E+V++ S
Sbjct: 629 NIMDLEAAKAKGAMALFGEKYDERVRVLS 657
>gi|293415946|ref|ZP_06658586.1| alanyl-tRNA synthetase [Escherichia coli B185]
gi|331684309|ref|ZP_08384901.1| alanine--tRNA ligase [Escherichia coli H299]
gi|422817812|ref|ZP_16866025.1| alanyl-tRNA synthetase [Escherichia coli M919]
gi|432450826|ref|ZP_19693086.1| alanyl-tRNA synthetase [Escherichia coli KTE193]
gi|432948665|ref|ZP_20143670.1| alanyl-tRNA synthetase [Escherichia coli KTE196]
gi|433034510|ref|ZP_20222215.1| alanyl-tRNA synthetase [Escherichia coli KTE112]
gi|433044222|ref|ZP_20231712.1| alanyl-tRNA synthetase [Escherichia coli KTE117]
gi|450191795|ref|ZP_21891343.1| alanyl-tRNA ligase [Escherichia coli SEPT362]
gi|291432135|gb|EFF05117.1| alanyl-tRNA synthetase [Escherichia coli B185]
gi|331077924|gb|EGI49130.1| alanine--tRNA ligase [Escherichia coli H299]
gi|385538325|gb|EIF85187.1| alanyl-tRNA synthetase [Escherichia coli M919]
gi|430978760|gb|ELC95561.1| alanyl-tRNA synthetase [Escherichia coli KTE193]
gi|431455944|gb|ELH36295.1| alanyl-tRNA synthetase [Escherichia coli KTE196]
gi|431549148|gb|ELI23236.1| alanyl-tRNA synthetase [Escherichia coli KTE112]
gi|431554917|gb|ELI28782.1| alanyl-tRNA synthetase [Escherichia coli KTE117]
gi|449319042|gb|EMD09098.1| alanyl-tRNA ligase [Escherichia coli SEPT362]
Length = 876
Score = 576 bits (1484), Expect = e-161, Method: Compositional matrix adjust.
Identities = 315/689 (45%), Positives = 436/689 (63%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +I+ +++ + D +N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRTLIQAVAKVTGAT-----DLSNKSLRVIADHIRSCAFLIADGVMP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K F + I++ D+K ++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAKE--------TFFYKLVGPLIDVMGSAGEDLKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGFGADYNAM-IRVDSA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD L V +L V+GK V ++ G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G N V + + +++G H G + G L+VG V+A VD R R +++H+ATH
Sbjct: 513 KGANFSFVVEDTQKYGQAIG----HIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G SQ GSLV LRFDF+ + + E+ +E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M L+ AK GA+A+FGEKY E+V++ S
Sbjct: 629 NIMDLEAAKAKGAMALFGEKYDERVRVLS 657
>gi|15832808|ref|NP_311581.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. Sakai]
gi|168749982|ref|ZP_02775004.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4113]
gi|168755438|ref|ZP_02780445.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4401]
gi|168762908|ref|ZP_02787915.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4501]
gi|168768784|ref|ZP_02793791.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4486]
gi|168774775|ref|ZP_02799782.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4196]
gi|168778675|ref|ZP_02803682.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4076]
gi|168800226|ref|ZP_02825233.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC508]
gi|194433071|ref|ZP_03065354.1| alanyl-tRNA synthetase [Shigella dysenteriae 1012]
gi|195938445|ref|ZP_03083827.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4024]
gi|208805868|ref|ZP_03248205.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4206]
gi|208813761|ref|ZP_03255090.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4045]
gi|208818286|ref|ZP_03258606.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4042]
gi|209398791|ref|YP_002272160.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4115]
gi|217327497|ref|ZP_03443580.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14588]
gi|254794638|ref|YP_003079475.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359]
gi|291284024|ref|YP_003500842.1| alanyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615]
gi|387508049|ref|YP_006160305.1| alanyl-tRNA synthetase [Escherichia coli O55:H7 str. RM12579]
gi|387883880|ref|YP_006314182.1| alanyl-tRNA synthetase [Escherichia coli Xuzhou21]
gi|416776800|ref|ZP_11874834.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. G5101]
gi|416788228|ref|ZP_11879760.1| alanyl-tRNA synthetase [Escherichia coli O157:H- str. 493-89]
gi|416800193|ref|ZP_11884672.1| alanyl-tRNA synthetase [Escherichia coli O157:H- str. H 2687]
gi|416810758|ref|ZP_11889436.1| alanyl-tRNA synthetase [Escherichia coli O55:H7 str. 3256-97]
gi|416821473|ref|ZP_11894087.1| alanyl-tRNA synthetase [Escherichia coli O55:H7 str. USDA 5905]
gi|416831835|ref|ZP_11899182.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. LSU-61]
gi|419087709|ref|ZP_13633062.1| alanyl-tRNA synthetase [Escherichia coli DEC4B]
gi|419105221|ref|ZP_13650348.1| alanyl-tRNA synthetase [Escherichia coli DEC4E]
gi|419127318|ref|ZP_13672196.1| alanyl-tRNA synthetase [Escherichia coli DEC5C]
gi|425139672|ref|ZP_18540054.1| alanine--tRNA ligase [Escherichia coli 10.0833]
gi|425238064|ref|ZP_18631784.1| alanine--tRNA ligase [Escherichia coli TT12B]
gi|425295965|ref|ZP_18686161.1| alanine--tRNA ligase [Escherichia coli PA38]
gi|425361679|ref|ZP_18747327.1| alanine--tRNA ligase [Escherichia coli EC1856]
gi|428985045|ref|ZP_19054441.1| alanine--tRNA ligase [Escherichia coli 93.0055]
gi|429074485|ref|ZP_19137738.1| alanine--tRNA ligase [Escherichia coli 99.0678]
gi|445008407|ref|ZP_21324646.1| alanine--tRNA ligase [Escherichia coli PA47]
gi|445013510|ref|ZP_21329617.1| alanine--tRNA ligase [Escherichia coli PA48]
gi|445046493|ref|ZP_21361743.1| alanine--tRNA ligase [Escherichia coli 3.4880]
gi|445057768|ref|ZP_21372626.1| alanine--tRNA ligase [Escherichia coli 99.0670]
gi|452969481|ref|ZP_21967708.1| alanyl-tRNA ligase [Escherichia coli O157:H7 str. EC4009]
gi|20532246|sp|Q8X3W8.2|SYA_ECO57 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|13363025|dbj|BAB36977.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. Sakai]
gi|187769613|gb|EDU33457.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4196]
gi|188015823|gb|EDU53945.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4113]
gi|189003197|gb|EDU72183.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4076]
gi|189357241|gb|EDU75660.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4401]
gi|189362083|gb|EDU80502.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4486]
gi|189366853|gb|EDU85269.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4501]
gi|189377449|gb|EDU95865.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC508]
gi|194418798|gb|EDX34884.1| alanyl-tRNA synthetase [Shigella dysenteriae 1012]
gi|208725669|gb|EDZ75270.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4206]
gi|208735038|gb|EDZ83725.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4045]
gi|208738409|gb|EDZ86091.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4042]
gi|209160191|gb|ACI37624.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4115]
gi|217319864|gb|EEC28289.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14588]
gi|254594038|gb|ACT73399.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359]
gi|290763897|gb|ADD57858.1| Alanyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615]
gi|320640339|gb|EFX09878.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. G5101]
gi|320645886|gb|EFX14867.1| alanyl-tRNA synthetase [Escherichia coli O157:H- str. 493-89]
gi|320651186|gb|EFX19621.1| alanyl-tRNA synthetase [Escherichia coli O157:H- str. H 2687]
gi|320656736|gb|EFX24624.1| alanyl-tRNA synthetase [Escherichia coli O55:H7 str. 3256-97 TW
07815]
gi|320662279|gb|EFX29676.1| alanyl-tRNA synthetase [Escherichia coli O55:H7 str. USDA 5905]
gi|320667330|gb|EFX34288.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. LSU-61]
gi|374360043|gb|AEZ41750.1| alanyl-tRNA synthetase [Escherichia coli O55:H7 str. RM12579]
gi|377928983|gb|EHU92883.1| alanyl-tRNA synthetase [Escherichia coli DEC4B]
gi|377946401|gb|EHV10081.1| alanyl-tRNA synthetase [Escherichia coli DEC4E]
gi|377973037|gb|EHV36381.1| alanyl-tRNA synthetase [Escherichia coli DEC5C]
gi|386797338|gb|AFJ30372.1| alanyl-tRNA synthetase [Escherichia coli Xuzhou21]
gi|408153813|gb|EKH82183.1| alanine--tRNA ligase [Escherichia coli TT12B]
gi|408216375|gb|EKI40703.1| alanine--tRNA ligase [Escherichia coli PA38]
gi|408276030|gb|EKI95963.1| alanine--tRNA ligase [Escherichia coli EC1856]
gi|408577740|gb|EKK53290.1| alanine--tRNA ligase [Escherichia coli 10.0833]
gi|427240883|gb|EKW08329.1| alanine--tRNA ligase [Escherichia coli 93.0055]
gi|427326959|gb|EKW88360.1| alanine--tRNA ligase [Escherichia coli 99.0678]
gi|444622150|gb|ELV96114.1| alanine--tRNA ligase [Escherichia coli PA47]
gi|444623119|gb|ELV97054.1| alanine--tRNA ligase [Escherichia coli PA48]
gi|444658799|gb|ELW31236.1| alanine--tRNA ligase [Escherichia coli 3.4880]
gi|444668923|gb|ELW40921.1| alanine--tRNA ligase [Escherichia coli 99.0670]
Length = 876
Score = 576 bits (1484), Expect = e-161, Method: Compositional matrix adjust.
Identities = 315/689 (45%), Positives = 436/689 (63%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +I+ +++ + D +N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRTLIQAVAKVTGAT-----DLSNKSLRVIADHIRSCAFLIADGVMP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K F + I++ D+K ++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAKE--------TFFYKLVGPLIDVMGSAGEDLKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGFGADYNAM-IRVDSA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD L V +L V+GK V ++ G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G N V + + +++G H G + G L+VG V+A VD R R +++H+ATH
Sbjct: 513 KGANFSFVVEDTQKYGQAIG----HIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G SQ GSLV LRFDF+ + + E+ +E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M L+ AK GA+A+FGEKY E+V++ S
Sbjct: 629 NIMDLEAAKAKGAMALFGEKYDERVRVLS 657
>gi|416509053|ref|ZP_11736370.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB31]
gi|416515259|ref|ZP_11738523.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. ATCC BAA710]
gi|416530102|ref|ZP_11744718.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. LQC 10]
gi|416537195|ref|ZP_11748811.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB30]
gi|416562796|ref|ZP_11762432.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 42N]
gi|416572900|ref|ZP_11767484.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 4441 H]
gi|363551522|gb|EHL35839.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. LQC 10]
gi|363551876|gb|EHL36188.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB31]
gi|363563887|gb|EHL47953.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB30]
gi|363564239|gb|EHL48296.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. ATCC BAA710]
gi|363572267|gb|EHL56159.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 4441 H]
gi|363572574|gb|EHL56465.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 42N]
Length = 876
Score = 576 bits (1484), Expect = e-161, Method: Compositional matrix adjust.
Identities = 315/689 (45%), Positives = 438/689 (63%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWFALPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +I+ +++ + D N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRTLIEAVAKVTGAT-----DLGNKSLRVIADHIRSCAFLVADGVLP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K F + IE+ ++K ++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAKE--------TFFYKLVGPLIEVMGSAGEELKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLQGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGFGADYNAM-IRVDSA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD L V +L V+GK V ++ G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDHLELNGKVTALFVDGKAVEAINAGQEAVVVLDQTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G AV + + +++G H G + G L+VG V+A VD R R +++H+ATH
Sbjct: 513 KGAGFTFAVDDTQKYGQAIG----HIGKLSAGALKVGDAVQADVDEARRARIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G +Q GSLV+ LRFDF+ + + +E+ ++E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVAQKGSLVSDKVLRFDFSHNEAMKPSEIRQVEDLVNAQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M LD AK GA+A+FGEKY E+V++ S
Sbjct: 629 NIMDLDAAKAKGAMALFGEKYDERVRVLS 657
>gi|153802555|ref|ZP_01957141.1| alanyl-tRNA synthetase [Vibrio cholerae MZO-3]
gi|124121918|gb|EAY40661.1| alanyl-tRNA synthetase [Vibrio cholerae MZO-3]
Length = 860
Score = 576 bits (1484), Expect = e-161, Method: Compositional matrix adjust.
Identities = 315/687 (45%), Positives = 435/687 (63%), Gaps = 51/687 (7%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S D +R+ FL F+ S+GH+++ S+SLVP DPT+L T AGM QFK FLG R RA
Sbjct: 4 STDEVRRAFLSFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDCFLGLEKRTYTRAT 63
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
T+QRC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AIQ+AWEF T LP
Sbjct: 64 TAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIQYAWEFLTDVLQLPK 123
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG--------ADDNFWNSGATGPCGPCSE 215
RL ++VYE DDEAF+IWNK+VG+P + I R+G DNFW G TGPCGPC+E
Sbjct: 124 ERLLVTVYETDDEAFDIWNKKVGIPADRIIRIGDKKGGKKFDSDNFWQMGDTGPCGPCTE 183
Query: 216 IYYDFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLER 272
I+YD H D G D RFIE +N VFMQ+N+ DG++EPL + ++DTG+G+ER
Sbjct: 184 IFYD-HGDHIWGGPPGSPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPSVDTGMGIER 242
Query: 273 IARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDG 332
I+ I+Q V +NYE D+ +IK A++ + Y D TN +L+++ DH+R+ +L+ DG
Sbjct: 243 ISAIMQGVHSNYEIDVFQTLIKAAADA--IGY---QDLTNQSLRVVADHIRSCAFLIVDG 297
Query: 333 VFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVK 392
V PSN GRGYV+RR+IRRAVR G LG +G L G + +EL
Sbjct: 298 VMPSNEGRGYVLRRIIRRAVRHGNKLGAQGAFFHKLVGPLAEVMGTAGVELK-------- 349
Query: 393 AREQRILEELKR-EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDT 451
++Q ++E++ R EE F +TL+RG +L+ DAL + SG V L G+ F LYDT
Sbjct: 350 -KQQALVEKVLRIEEENFGRTLDRGMSILN----DALDQL--SGLV--LDGETVFKLYDT 400
Query: 452 FGFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTE 511
+GFP ++T +VA E G S+D GF+ ME QR Q A A + D ++ L + +TE
Sbjct: 401 YGFPADLTNDVARERGFSIDEAGFEQAMEEQR---QRAREAGQFGTDYNS-LIKSATNTE 456
Query: 512 FLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQG 571
F GY +++V + V G V +S G ++L+ TPFYAESGGQ GD G L G
Sbjct: 457 FCGYTASRGQSVVREMFVEGAEVSALSAGDKAIIVLDNTPFYAESGGQCGDTGVLKTDAG 516
Query: 572 TNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLL 631
+ V+D +K LG+ H G + +GVL G +V+AIVD K R ++H+ATHLL
Sbjct: 517 ------IFHVEDTQK-LGNAIAHHGVLAQGVLATGDQVDAIVDEKRRAAISLNHSATHLL 569
Query: 632 QAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKV 691
AAL+KV+G+ +Q GSLV + LRFDF+ + E++E+ERL+N I + ++T +
Sbjct: 570 HAALRKVLGEHVAQKGSLVRAETLRFDFSHLEAMTPAEIKEVERLVNQEIRHNHNIETNI 629
Query: 692 MALDDAKRAGAIAMFGEKYGEQVKISS 718
M +D+AK GA+A+FGEKY +QV++ S
Sbjct: 630 MNIDEAKAKGAMALFGEKYDDQVRVLS 656
>gi|168262064|ref|ZP_02684037.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Hadar str. RI_05P066]
gi|200387922|ref|ZP_03214534.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Virchow str. SL491]
gi|416425094|ref|ZP_11692129.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 315996572]
gi|416428272|ref|ZP_11693772.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-1]
gi|416438728|ref|ZP_11699707.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-3]
gi|416444997|ref|ZP_11704041.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-4]
gi|416451728|ref|ZP_11708478.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-1]
gi|416459694|ref|ZP_11714139.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-2]
gi|416471519|ref|ZP_11719239.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 531954]
gi|416475510|ref|ZP_11720657.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. NC_MB110209-0054]
gi|416488620|ref|ZP_11725833.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. OH_2009072675]
gi|416499449|ref|ZP_11730816.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. CASC_09SCPH15965]
gi|416544803|ref|ZP_11753059.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 19N]
gi|416576943|ref|ZP_11769469.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 81038-01]
gi|416584965|ref|ZP_11774569.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. MD_MDA09249507]
gi|416590574|ref|ZP_11777828.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 414877]
gi|416606621|ref|ZP_11787889.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 413180]
gi|416616498|ref|ZP_11794122.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 446600]
gi|416621840|ref|ZP_11796603.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 609458-1]
gi|416627129|ref|ZP_11799000.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 556150-1]
gi|416640360|ref|ZP_11804978.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 609460]
gi|416647453|ref|ZP_11808392.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 507440-20]
gi|416656581|ref|ZP_11813267.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 556152]
gi|416667825|ref|ZP_11818505.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB101509-0077]
gi|416679149|ref|ZP_11822873.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB102109-0047]
gi|416691442|ref|ZP_11826221.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB110209-0055]
gi|416706281|ref|ZP_11831540.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB111609-0052]
gi|416712040|ref|ZP_11835751.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009083312]
gi|416718236|ref|ZP_11840344.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009085258]
gi|416726820|ref|ZP_11846865.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 315731156]
gi|416731056|ref|ZP_11848991.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2009159199]
gi|416741150|ref|ZP_11854901.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008282]
gi|416749479|ref|ZP_11859268.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008283]
gi|416753629|ref|ZP_11860933.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008284]
gi|416765270|ref|ZP_11868651.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008285]
gi|416768830|ref|ZP_11870828.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008287]
gi|418482086|ref|ZP_13051109.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 80959-06]
gi|418493530|ref|ZP_13059996.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035318]
gi|418501079|ref|ZP_13067469.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035320]
gi|418505327|ref|ZP_13071673.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035321]
gi|418510560|ref|ZP_13076839.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035327]
gi|418512177|ref|ZP_13078420.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Pomona str. ATCC 10729]
gi|418524861|ref|ZP_13090846.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008286]
gi|199605020|gb|EDZ03565.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Virchow str. SL491]
gi|205349249|gb|EDZ35880.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Hadar str. RI_05P066]
gi|322614354|gb|EFY11285.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 315996572]
gi|322621581|gb|EFY18434.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-1]
gi|322624442|gb|EFY21275.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-3]
gi|322628773|gb|EFY25556.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-4]
gi|322633500|gb|EFY30242.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-1]
gi|322635924|gb|EFY32632.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-2]
gi|322639632|gb|EFY36317.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 531954]
gi|322646815|gb|EFY43318.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. NC_MB110209-0054]
gi|322650583|gb|EFY46988.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. OH_2009072675]
gi|322654805|gb|EFY51124.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. CASC_09SCPH15965]
gi|322659025|gb|EFY55278.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 19N]
gi|322664408|gb|EFY60602.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 81038-01]
gi|322668343|gb|EFY64500.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. MD_MDA09249507]
gi|322673677|gb|EFY69778.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 414877]
gi|322681432|gb|EFY77464.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 413180]
gi|322683834|gb|EFY79844.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 446600]
gi|323193777|gb|EFZ78980.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 609458-1]
gi|323200247|gb|EFZ85329.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 556150-1]
gi|323203250|gb|EFZ88279.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 609460]
gi|323212791|gb|EFZ97602.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 556152]
gi|323216317|gb|EGA01044.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB101509-0077]
gi|323221065|gb|EGA05496.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB102109-0047]
gi|323226886|gb|EGA11068.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB110209-0055]
gi|323230830|gb|EGA14948.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB111609-0052]
gi|323234819|gb|EGA18905.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009083312]
gi|323238858|gb|EGA22908.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009085258]
gi|323241558|gb|EGA25589.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 315731156]
gi|323248295|gb|EGA32231.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2009159199]
gi|323251121|gb|EGA34994.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008282]
gi|323255840|gb|EGA39588.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008283]
gi|323263139|gb|EGA46677.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008284]
gi|323264356|gb|EGA47862.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008285]
gi|323271183|gb|EGA54611.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008287]
gi|366064383|gb|EHN28582.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035318]
gi|366064819|gb|EHN29016.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 80959-06]
gi|366067051|gb|EHN31205.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035320]
gi|366067634|gb|EHN31782.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035321]
gi|366076151|gb|EHN40190.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035327]
gi|366083684|gb|EHN47600.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Pomona str. ATCC 10729]
gi|366830430|gb|EHN57301.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 507440-20]
gi|372207720|gb|EHP21219.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008286]
Length = 876
Score = 576 bits (1484), Expect = e-161, Method: Compositional matrix adjust.
Identities = 315/689 (45%), Positives = 438/689 (63%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWFALPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +I+ +++ + D N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRTLIEAVAKVTGAT-----DLGNKSLRVIADHIRSCAFLVADGVLP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K F + IE+ ++K ++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAKE--------TFFYKLVGPLIEVMGSAGEELKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLQGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGFGADYNAM-IRVDSA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD L V +L V+GK V ++ G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDHLELNGKVTALFVDGKAVEAINAGQEAVVVLDQTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G AV + + +++G H G + G L+VG V+A VD R R +++H+ATH
Sbjct: 513 KGAGFTFAVDDTQKYGQAIG----HLGKLSAGALKVGDAVQADVDEARRARIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G +Q GSLV+ LRFDF+ + + +E+ ++E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVAQKGSLVSDKVLRFDFSHNEAMKPSEIRQVEDLVNAQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M LD AK GA+A+FGEKY E+V++ S
Sbjct: 629 NIMDLDAAKAKGAMALFGEKYDERVRVLS 657
>gi|421342181|ref|ZP_15792588.1| alanyl-tRNA synthetase [Vibrio cholerae HC-43B1]
gi|395945684|gb|EJH56349.1| alanyl-tRNA synthetase [Vibrio cholerae HC-43B1]
Length = 858
Score = 576 bits (1484), Expect = e-161, Method: Compositional matrix adjust.
Identities = 314/687 (45%), Positives = 435/687 (63%), Gaps = 51/687 (7%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S D +R+ FL F+ S+GH+++ S+SLVP DPT+L T AGM QFK FLG R RA
Sbjct: 2 STDEVRRAFLSFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDCFLGLEKRAYTRAT 61
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
T+QRC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AIQ+AWEF T LP
Sbjct: 62 TAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIQYAWEFLTDVLQLPK 121
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG--------ADDNFWNSGATGPCGPCSE 215
RL ++VYE DDEAF+IWNK+VG+P + I R+G DNFW G TGPCGPC+E
Sbjct: 122 ERLLVTVYETDDEAFDIWNKKVGIPADRIIRIGDKKGGKKFDSDNFWQMGDTGPCGPCTE 181
Query: 216 IYYDFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLER 272
I+YD H D G D RFIE +N VFMQ+N+ DG++EPL + ++DTG+G+ER
Sbjct: 182 IFYD-HGDHIWGGPPGSPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPSVDTGMGIER 240
Query: 273 IARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDG 332
I+ I+Q V +NYE D+ +IK A++ + Y D TN +L+++ DH+R+ +L+ DG
Sbjct: 241 ISAIMQGVHSNYEIDVFQTLIKAAADA--IGY---QDLTNQSLRVVADHIRSCAFLIVDG 295
Query: 333 VFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVK 392
V PSN GRGYV+RR+IRRAVR G LG +G L G + +EL
Sbjct: 296 VMPSNEGRGYVLRRIIRRAVRHGNKLGAQGAFFHKLVGPLAEVMGTAGVELK-------- 347
Query: 393 AREQRILEELKR-EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDT 451
++Q ++E++ R EE F +TL+RG +L+ DAL + SG V L G+ F LYDT
Sbjct: 348 -KQQALVEKVLRIEEENFGRTLDRGMSILN----DALDQL--SGQV--LDGETVFKLYDT 398
Query: 452 FGFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTE 511
+GFP ++T +VA E G S+D GF+ ME QR Q A A + D ++ L + +TE
Sbjct: 399 YGFPADLTNDVARERGFSIDEAGFEQAMEEQR---QRAREAGQFGTDYNS-LIKSSTNTE 454
Query: 512 FLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQG 571
F GY +++V + V G V +S G ++L+ TPFYAESGGQ GD G L G
Sbjct: 455 FCGYTASRGQSVVREMFVEGAEVSTLSAGDKAIIVLDNTPFYAESGGQCGDTGVLKTDAG 514
Query: 572 TNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLL 631
+ V+D +K LG+ H G + +GVL G +V+AIVD K R ++H+ATHLL
Sbjct: 515 ------IFHVEDTQK-LGNAIAHHGVLAQGVLATGDQVDAIVDEKRRAAISLNHSATHLL 567
Query: 632 QAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKV 691
AAL+KV+G+ +Q GSLV + LRFDF+ + E++E+ERL+N + + ++T +
Sbjct: 568 HAALRKVLGEHVAQKGSLVRAETLRFDFSHLEAMTAAEIKEVERLVNQEVRRNHSIETNI 627
Query: 692 MALDDAKRAGAIAMFGEKYGEQVKISS 718
M +D+AK GA+A+FGEKY +QV++ S
Sbjct: 628 MNIDEAKAKGAMALFGEKYDDQVRVLS 654
>gi|229525206|ref|ZP_04414611.1| alanyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426]
gi|229338787|gb|EEO03804.1| alanyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426]
Length = 860
Score = 576 bits (1484), Expect = e-161, Method: Compositional matrix adjust.
Identities = 314/687 (45%), Positives = 435/687 (63%), Gaps = 51/687 (7%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S D +R+ FL F+ S+GH+++ S+SLVP DPT+L T AGM QFK FLG R RA
Sbjct: 4 STDEVRRAFLSFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDCFLGLEKRAYTRAT 63
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
T+QRC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AIQ+AWEF T LP
Sbjct: 64 TAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIQYAWEFLTDVLQLPK 123
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG--------ADDNFWNSGATGPCGPCSE 215
RL ++VYE DDEAF+IWNK+VG+P + I R+G DNFW G TGPCGPC+E
Sbjct: 124 ERLLVTVYETDDEAFDIWNKKVGIPADRIIRIGDKKGGKKFDSDNFWQMGDTGPCGPCTE 183
Query: 216 IYYDFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLER 272
I+YD H D G D RFIE +N VFMQ+N+ DG++EPL + ++DTG+G+ER
Sbjct: 184 IFYD-HGDHIWGGPPGSPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPSVDTGMGIER 242
Query: 273 IARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDG 332
++ I+Q V +NYE D+ +IK A++ + Y D TN +L+++ DH+R+ +L+ DG
Sbjct: 243 VSAIMQGVHSNYEIDVFQTLIKAAADA--IGY---QDLTNQSLRVVADHIRSCAFLIVDG 297
Query: 333 VFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVK 392
V PSN GRGYV+RR+IRRAVR G LG +G L G + +EL
Sbjct: 298 VMPSNEGRGYVLRRIIRRAVRHGNKLGAQGAFFHKLVGPLAEVMGTAGVELK-------- 349
Query: 393 AREQRILEELKR-EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDT 451
++Q ++E++ R EE F +TL+RG +L+ DAL + SG V L G+ F LYDT
Sbjct: 350 -KQQALVEKVLRIEEENFGRTLDRGMSILN----DALDQL--SGQV--LDGETVFKLYDT 400
Query: 452 FGFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTE 511
+GFP ++T +VA E G S+D GF+ ME QR Q A A + D ++ L + +TE
Sbjct: 401 YGFPADLTNDVARERGFSIDEAGFEQAMEEQR---QRAREAGQFGTDYNS-LIKSATNTE 456
Query: 512 FLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQG 571
F GY +++V + V G V +S G ++L+ TPFYAESGGQ GD G L G
Sbjct: 457 FCGYTASRGQSVVREMFVEGAEVSTLSAGDKAIIVLDNTPFYAESGGQCGDTGVLKTDAG 516
Query: 572 TNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLL 631
+ V+D +K LG+ H G + +GVL G +V+AIVD K R ++H+ATHLL
Sbjct: 517 ------IFHVEDTQK-LGNAIAHHGVLAQGVLATGDQVDAIVDEKRRAAISLNHSATHLL 569
Query: 632 QAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKV 691
AAL+KV+G+ +Q GSLV + LRFDF+ + E++E+ERL+N I + ++T +
Sbjct: 570 HAALRKVLGEHVAQKGSLVRAETLRFDFSHLEAMTPAEIKEVERLVNQEIRHNHNIETNI 629
Query: 692 MALDDAKRAGAIAMFGEKYGEQVKISS 718
M +D+AK GA+A+FGEKY +QV++ S
Sbjct: 630 MNIDEAKAKGAMALFGEKYDDQVRVLS 656
>gi|416274637|ref|ZP_11643756.1| Alanyl-tRNA synthetase [Shigella dysenteriae CDC 74-1112]
gi|320173452|gb|EFW48651.1| Alanyl-tRNA synthetase [Shigella dysenteriae CDC 74-1112]
Length = 876
Score = 576 bits (1484), Expect = e-161, Method: Compositional matrix adjust.
Identities = 316/689 (45%), Positives = 436/689 (63%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEV +P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYESDDEAYEIWEKEVEIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +I+ +++ + D +N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRTLIQAVAKVTGAT-----DLSNKSLRVIADHIRSCAFLIADGVMP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K F + I++ D+K ++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAKE--------TFFYKLVGPLIDVMGSAGEDLKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GFD ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFDAAMEEQRRRAREASGFGADYNAM-IRVDSA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD L V +L V+GK V ++ G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G N AV + + +++G H G + G L+VG V+A VD R R +++H+ATH
Sbjct: 513 KGANFSFAVEDTQKYGQAIG----HIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G SQ GSLV LRFDF+ + + E+ +E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M L+ AK GA+A+FGEKY E+V++ S
Sbjct: 629 NIMDLEAAKAKGAMALFGEKYDERVRVLS 657
>gi|170019057|ref|YP_001724011.1| alanyl-tRNA synthetase [Escherichia coli ATCC 8739]
gi|205830085|sp|B1IUY2.1|SYA_ECOLC RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|169753985|gb|ACA76684.1| alanyl-tRNA synthetase [Escherichia coli ATCC 8739]
Length = 876
Score = 576 bits (1484), Expect = e-161, Method: Compositional matrix adjust.
Identities = 315/689 (45%), Positives = 437/689 (63%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +I+ +++ + D +N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRTLIQAVAKVTGAT-----DLSNKSLRVIADHIRSCAFLIADGVMP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
+N RGYV+RR+IRRAVR G +LG K F + I++ D+K ++
Sbjct: 302 ANENRGYVLRRIIRRAVRHGNMLGAKE--------TFFYKLVGPLIDVMGSAGEDLKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGFGADYNAM-IRVDSA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD L V +L V+GK V ++ G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G N AV + + +++G H G + G L+VG V+A VD R R +++H+ATH
Sbjct: 513 KGANFSFAVEDTQKYGQAIG----HIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G SQ GSLV LRFDF+ + + E+ +E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNTQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M L+ AK GA+A+FGEKY E+V++ S
Sbjct: 629 NIMDLEAAKAKGAMALFGEKYDERVRVLS 657
>gi|357038688|ref|ZP_09100485.1| alanyl-tRNA synthetase [Desulfotomaculum gibsoniae DSM 7213]
gi|355359480|gb|EHG07242.1| alanyl-tRNA synthetase [Desulfotomaculum gibsoniae DSM 7213]
Length = 878
Score = 575 bits (1483), Expect = e-161, Method: Compositional matrix adjust.
Identities = 300/675 (44%), Positives = 440/675 (65%), Gaps = 28/675 (4%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
+G IR+++L F+ S+GHK+LPSASL+P DP++L T AGM+ FKP F G +V RA
Sbjct: 2 TGKEIREKYLKFFESKGHKILPSASLIPHNDPSILWTAAGMVPFKPYFTGAAKPEVTRAT 61
Query: 108 TSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
T Q+C+RT D++ VGRT+RHHTFFEMLGNFSFGDYFKKEAI WAWEF T GL A +LW
Sbjct: 62 TCQKCLRTPDIDVVGRTARHHTFFEMLGNFSFGDYFKKEAINWAWEFVTEHLGLAAEKLW 121
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCS 227
I++YEDDDEA+ IW ++VG+P I RMG D NFW G GPCGPCSEIYYD +RGC
Sbjct: 122 ITIYEDDDEAYGIWREDVGIPENRIVRMGKDTNFWEIG-VGPCGPCSEIYYDQGNERGCG 180
Query: 228 DVDLG---DDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNY 284
D D R++E +NLVF+Q+ + ++G+ L+ K IDTG+GLER+A +LQ V N+
Sbjct: 181 SPDCAVGCDCDRYLEIWNLVFIQFFRDEEGNYTTLQNKGIDTGMGLERVASVLQNVKTNF 240
Query: 285 ETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVV 344
+TDL+ I+ EL Y S+D +L LK+I DH RA+ + +SDG PSN GRGYV+
Sbjct: 241 DTDLLRDIMDFTGELTGNRYGSSDD-IDLALKVIADHSRAVSFAISDGALPSNEGRGYVL 299
Query: 345 RRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKR 404
RRL+RRAVR GR+LG+ FL +A I+ D+ + + ++
Sbjct: 300 RRLLRRAVRFGRVLGVA--------EPFLYRVAGAVIDKMGDTYQDLVKNRELVTRVIRT 351
Query: 405 EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAE 464
EE RF +TL +G +L +++ +A R++G + G+ AF LYDT+GFP+E+T+E+A
Sbjct: 352 EEERFGETLAQGTDMLSRLIQEA----RQAGR-NYIDGEQAFRLYDTYGFPLELTEEIAG 406
Query: 465 EHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLA---EKIPDTEFLGYDTLSAK 521
E+ + VD +GF ME QR ++++A + + +A L E+ +T F+GY+TLS+K
Sbjct: 407 ENDLVVDQEGFTRAMEQQRNRARSARQETEYISEKAAHLKKLLEQTGETVFVGYETLSSK 466
Query: 522 AIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEV 581
+I++++ V+ + V + G +VE++L+ TP YAESGGQ+ D+ + N ++ V V
Sbjct: 467 SIIKAIFVDDRQVEQAEAGQEVELVLDITPCYAESGGQVSDHARI------NAESTEVAV 520
Query: 582 KDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQ 641
+ V + + + +H+G + G++ V + VD + R +H+ATHLL ALK+V+G+
Sbjct: 521 EMVTRPVEGLHLHRGRVLGGIIRVNDKTTVQVDARRRMNIARNHSATHLLHKALKEVLGE 580
Query: 642 ETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAG 701
+QAGSLVA DR+RFDF + ELE +E+++N I + +QT LD+A+ G
Sbjct: 581 HVNQAGSLVAPDRMRFDFTHFAAIAPDELERVEQMVNEAILNNLKVQTVESTLDEARAMG 640
Query: 702 AIAMFGEKYGEQVKI 716
A+A+F EKYG++V++
Sbjct: 641 AMALFDEKYGDRVRV 655
>gi|168235854|ref|ZP_02660912.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|194737652|ref|YP_002115779.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|194713154|gb|ACF92375.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|197290777|gb|EDY30131.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
Length = 876
Score = 575 bits (1483), Expect = e-161, Method: Compositional matrix adjust.
Identities = 315/689 (45%), Positives = 438/689 (63%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWFALPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +I+ +++ + D N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRTLIEAVAKVTGAT-----DLGNKSLRVIADHIRSCAFLVADGVLP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K F + IE+ ++K ++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAKE--------TFFYKLVGPLIEVMGSAGEELKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLQGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGFGADYNAM-IRVDSA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD L V +L V+GK V ++ G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDHLELNGKVTALFVDGKAVEAINAGQEAVVVLDQTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G AV + + +++G H G + G L+VG V+A VD R R +++H+ATH
Sbjct: 513 KGAGFTFAVDDTQKYGQAIG----HIGKLSAGALKVGDAVQADVDEARRARIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G +Q GSLV+ LRFDF+ + + +E+ ++E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVAQKGSLVSDKVLRFDFSHNEAMKPSEIRQVEDLVNAQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M LD AK GA+A+FGEKY E+V++ S
Sbjct: 629 NIMDLDAAKAKGAMALFGEKYDERVRVLS 657
>gi|422767798|ref|ZP_16821524.1| alanyl-tRNA synthetase [Escherichia coli E1520]
gi|323935749|gb|EGB32063.1| alanyl-tRNA synthetase [Escherichia coli E1520]
Length = 876
Score = 575 bits (1483), Expect = e-161, Method: Compositional matrix adjust.
Identities = 315/689 (45%), Positives = 437/689 (63%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G + DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYSSDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +I+ +++ + D +N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRTLIQAVAKVTGAT-----DLSNKSLRVIADHIRSCAFLIADGVMP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K F + I++ D+K ++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAKE--------TFFYKLVGPLIDVMGSAGEDLKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGFGADYNAM-IRVDSA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD L V +L V+GK V ++ G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G N AV + + +++G H G + G L+VG V+A VD R R +++H+ATH
Sbjct: 513 KGANFSFAVEDTQKYGQAIG----HIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G SQ GSLV LRFDF+ + + E+ +E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNTQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M L+ AK GA+A+FGEKY E+V++ S
Sbjct: 629 NIMDLEAAKAKGAMALFGEKYDERVRVLS 657
>gi|417819405|ref|ZP_12466022.1| alanyl-tRNA synthetase [Vibrio cholerae HE39]
gi|419835471|ref|ZP_14358916.1| alanine--tRNA ligase [Vibrio cholerae HC-46B1]
gi|423733834|ref|ZP_17707050.1| alanine--tRNA ligase [Vibrio cholerae HC-41B1]
gi|423946562|ref|ZP_17733470.1| alanine--tRNA ligase [Vibrio cholerae HE-40]
gi|423976000|ref|ZP_17737017.1| alanine--tRNA ligase [Vibrio cholerae HE-46]
gi|424008118|ref|ZP_17751068.1| alanine--tRNA ligase [Vibrio cholerae HC-44C1]
gi|340041261|gb|EGR02228.1| alanyl-tRNA synthetase [Vibrio cholerae HE39]
gi|408631837|gb|EKL04360.1| alanine--tRNA ligase [Vibrio cholerae HC-41B1]
gi|408662016|gb|EKL32993.1| alanine--tRNA ligase [Vibrio cholerae HE-40]
gi|408666174|gb|EKL36973.1| alanine--tRNA ligase [Vibrio cholerae HE-46]
gi|408858884|gb|EKL98554.1| alanine--tRNA ligase [Vibrio cholerae HC-46B1]
gi|408866405|gb|EKM05788.1| alanine--tRNA ligase [Vibrio cholerae HC-44C1]
Length = 860
Score = 575 bits (1483), Expect = e-161, Method: Compositional matrix adjust.
Identities = 314/687 (45%), Positives = 435/687 (63%), Gaps = 51/687 (7%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S D +R+ FL F+ S+GH+++ S+SLVP DPT+L T AGM QFK FLG R RA
Sbjct: 4 STDEVRRAFLSFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDCFLGLEKRAYTRAT 63
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
T+QRC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AIQ+AWEF T LP
Sbjct: 64 TAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIQYAWEFLTDVLQLPK 123
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG--------ADDNFWNSGATGPCGPCSE 215
RL ++VYE DDEAF+IWNK+VG+P + I R+G DNFW G TGPCGPC+E
Sbjct: 124 ERLLVTVYETDDEAFDIWNKKVGIPADRIIRIGDKKGGKKFDSDNFWQMGDTGPCGPCTE 183
Query: 216 IYYDFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLER 272
I+YD H D G D RFIE +N VFMQ+N+ DG++EPL + ++DTG+G+ER
Sbjct: 184 IFYD-HGDHIWGGPPGSPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPSVDTGMGIER 242
Query: 273 IARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDG 332
I+ I+Q V +NYE D+ +IK A++ + Y D TN +L+++ DH+R+ +L+ DG
Sbjct: 243 ISAIMQGVHSNYEIDVFQTLIKAAADA--IGY---QDLTNQSLRVVADHIRSCAFLIVDG 297
Query: 333 VFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVK 392
V PSN GRGYV+RR+IRRAVR G LG +G L G + +EL
Sbjct: 298 VMPSNEGRGYVLRRIIRRAVRHGNKLGAQGAFFHKLVGPLAEVMGTAGVELK-------- 349
Query: 393 AREQRILEELKR-EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDT 451
++Q ++E++ R EE F +TL+RG +L+ DAL + SG V L G+ F LYDT
Sbjct: 350 -KQQALVEKVLRIEEENFGRTLDRGMSILN----DALDQL--SGQV--LDGETVFKLYDT 400
Query: 452 FGFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTE 511
+GFP ++T +VA E G S+D GF+ ME QR Q A A + D ++ L + +TE
Sbjct: 401 YGFPADLTNDVARERGFSIDEAGFEQAMEEQR---QRAREAGQFGTDYNS-LIKSSTNTE 456
Query: 512 FLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQG 571
F GY +++V + V G V +S G ++L+ TPFYAESGGQ GD G L G
Sbjct: 457 FCGYTASRGQSVVREMFVEGAEVSTLSAGDKAIIVLDNTPFYAESGGQCGDTGVLKTDAG 516
Query: 572 TNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLL 631
+ V+D +K LG+ H G + +GVL G +V+AIVD K R ++H+ATHLL
Sbjct: 517 ------IFHVEDTQK-LGNAIAHHGVLAQGVLATGDQVDAIVDEKRRAAISLNHSATHLL 569
Query: 632 QAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKV 691
AAL+KV+G+ +Q GSLV + LRFDF+ + E++E+ERL+N + + ++T +
Sbjct: 570 HAALRKVLGEHVAQKGSLVRAETLRFDFSHLEAMTAAEIKEVERLVNQEVRRNHSIETNI 629
Query: 692 MALDDAKRAGAIAMFGEKYGEQVKISS 718
M +D+AK GA+A+FGEKY +QV++ S
Sbjct: 630 MNIDEAKAKGAMALFGEKYDDQVRVLS 656
>gi|161615724|ref|YP_001589688.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Paratyphi B str. SPB7]
gi|205830199|sp|A9N0C1.1|SYA_SALPB RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|161365088|gb|ABX68856.1| hypothetical protein SPAB_03515 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
Length = 876
Score = 575 bits (1483), Expect = e-161, Method: Compositional matrix adjust.
Identities = 315/689 (45%), Positives = 438/689 (63%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWFALPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGAMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +I+ +++ + D N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRTLIEAVAKVTGAT-----DLGNKSLRVIADHIRSCAFLVADGVLP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K F + IE+ ++K ++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAKE--------TFFYKLVGPLIEVMGSAGEELKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLQGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGFGADYNAM-IRVDSA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD L V +L V+GK V ++ G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDHLELNGKVTALFVDGKAVEAINAGQEAVVVLDQTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G +V + + +++G H G + G L+VG V+A VD R R +++H+ATH
Sbjct: 513 KGAGFTFSVDDTQKYGQAIG----HLGKLSAGALKVGDAVQADVDEARRARIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G +Q GSLV+ LRFDF+ + + +E+ E+E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVAQKGSLVSDKVLRFDFSHNEAMKPSEIREVEDLVNAQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M LD AK GA+A+FGEKY E+V++ S
Sbjct: 629 NIMDLDAAKAKGAMALFGEKYDERVRVLS 657
>gi|416550929|ref|ZP_11756255.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 29N]
gi|363567994|gb|EHL51990.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 29N]
Length = 876
Score = 575 bits (1483), Expect = e-161, Method: Compositional matrix adjust.
Identities = 315/689 (45%), Positives = 438/689 (63%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWFALPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +I+ +++ + D N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRTLIEAVAKVTGAT-----DLGNKSLRVIADHIRSCAFLVADGVLP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K F + IE+ ++K ++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAKE--------TFFYKLVGPLIEVMGSAGEELKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLQGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGFGADYNAM-IRVDSA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD L V +L V+GK V ++ G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDHLELNGKVTALFVDGKVVEAINAGQEAVVVLDQTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G AV + + +++G H G + G L+VG V+A VD R R +++H+ATH
Sbjct: 513 KGAGFTFAVDDTQKYGQAIG----HIGKLSAGALKVGDAVQADVDEARRARIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G +Q GSLV+ LRFDF+ + + +E+ ++E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVAQKGSLVSDKVLRFDFSHNEAMKPSEIRQVEDLVNAQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M LD AK GA+A+FGEKY E+V++ S
Sbjct: 629 NIMDLDAAKAKGAMALFGEKYDERVRVLS 657
>gi|329296669|ref|ZP_08254005.1| alanyl-tRNA synthetase [Plautia stali symbiont]
Length = 875
Score = 575 bits (1483), Expect = e-161, Method: Compositional matrix adjust.
Identities = 315/687 (45%), Positives = 425/687 (61%), Gaps = 50/687 (7%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM+QFK +FLG+ R RA
Sbjct: 4 SNAEIRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMVQFKDVFLGQDKRDYSRAT 63
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGL 161
TSQRC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFKKEAI +AWE T E F L
Sbjct: 64 TSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKKEAIAYAWELLTGEQWFKL 123
Query: 162 PANRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCS 214
P RLW++VYE DDEAFEIW ++GVP E I R+G A DNFW G TGPCGPC+
Sbjct: 124 PKERLWVTVYETDDEAFEIWANDIGVPRERIIRIGDNKGGAYASDNFWQMGDTGPCGPCT 183
Query: 215 EIYYDFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLE 271
EI+YD H D G D R+IE +N+VFMQ+N++ DG+++PL + ++DTG+GLE
Sbjct: 184 EIFYD-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMQPLPKPSVDTGMGLE 242
Query: 272 RIARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSD 331
RIA +LQ V +NY+ DL +I +++ + D N +L++I DH+R+ +L++D
Sbjct: 243 RIAAVLQHVYSNYKIDLFAKLINAVAQVTGAT-----DLNNKSLRVIADHIRSCAFLIAD 297
Query: 332 GVFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDV 391
GV PSN RGYV+RR+IRRAVR G +LG K AF + IE+ D+
Sbjct: 298 GVIPSNENRGYVLRRIIRRAVRHGNMLGAKE--------AFFYKLVAPLIEVMGAAGEDL 349
Query: 392 KAREQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDT 451
K +++ + LK EE +F +TLERG LLD LA T L G+ F LYDT
Sbjct: 350 KRQQKHVENALKNEEEQFAKTLERGLALLDDELAKLKGDT--------LDGETVFRLYDT 401
Query: 452 FGFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTE 511
FGFP ++T +V E + +D GF+ ME QR Q A A D + + P T+
Sbjct: 402 FGFPADLTADVCRERNLKIDEAGFEAAMEQQR---QRAREASGFGTDYNTVIRFDTP-TQ 457
Query: 512 FLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQG 571
F GYD LS +A V++L V+G+ V +V+ G D V+L++TPFY ESGGQ+GD G L
Sbjct: 458 FKGYDHLSLEATVQALFVDGQQVEQVAAGQDAVVILDQTPFYGESGGQVGDTGVL----- 512
Query: 572 TNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLL 631
Q A V+D +K G F H G +R+G L VG ++A VD R R ++H+ATHL+
Sbjct: 513 -TGQNAEFSVQDTQK-YGKAFGHIGKLRQGQLRVGDRLQAQVDEVRRSRIILNHSATHLM 570
Query: 632 QAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKV 691
AL+KV+G Q GSL LRFDF+ + ++ +E ++N I + T V
Sbjct: 571 HEALRKVLGDHVGQKGSLNNDKYLRFDFSHGEAMKPQQIRAVEDIVNAQIRRNLPITTNV 630
Query: 692 MALDDAKRAGAIAMFGEKYGEQVKISS 718
M L++AK GA A+FGEKY ++V++ S
Sbjct: 631 MDLEEAKALGATALFGEKYDQRVRVVS 657
>gi|168820492|ref|ZP_02832492.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|409246496|ref|YP_006887200.1| Alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Weltevreden str. 2007-60-3289-1]
gi|205342835|gb|EDZ29599.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|320087230|emb|CBY96995.1| Alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Weltevreden str. 2007-60-3289-1]
Length = 876
Score = 575 bits (1483), Expect = e-161, Method: Compositional matrix adjust.
Identities = 315/689 (45%), Positives = 438/689 (63%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWFALPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +I+ +++ + D N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRTLIEAVAKVTGAT-----DLGNKSLRVIADHIRSCAFLVADGVLP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K F + IE+ ++K ++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAKE--------TFFYKLVGPLIEVMGSAGEELKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLQGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGFGADYNAM-IRVDSA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD L V +L V+GK V ++ G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDHLELNGKVTALFVDGKAVEVINAGQEAVVVLDQTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G AV + + +++G H G + G L+VG V+A VD R R +++H+ATH
Sbjct: 513 KGAGFTFAVDDTQKYGQAIG----HIGKLSAGALKVGDAVQADVDEARRARIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G +Q GSLV+ LRFDF+ + + +E+ ++E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVAQKGSLVSDKVLRFDFSHNEAMKPSEIRQVEDLVNAQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M LD AK GA+A+FGEKY E+V++ S
Sbjct: 629 NIMDLDAAKAKGAMALFGEKYDERVRVLS 657
>gi|168787948|ref|ZP_02812955.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC869]
gi|261225988|ref|ZP_05940269.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. FRIK2000]
gi|261256754|ref|ZP_05949287.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. FRIK966]
gi|189372228|gb|EDU90644.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC869]
Length = 876
Score = 575 bits (1483), Expect = e-161, Method: Compositional matrix adjust.
Identities = 315/689 (45%), Positives = 436/689 (63%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +I+ +++ + D +N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRTLIQAVAKVTGAT-----DLSNKSLRVIADHIRSCAFLIADGVMP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K F + I++ D+K ++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAKE--------TFFYKLVGPLIDVMGSAGEDLKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGFGADYNAM-IRVDSA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD L V +L V+GK V ++ G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G N V + + +++G H G + G L+VG V+A VD R R +++H+ATH
Sbjct: 513 KGANFSFVVEDTQKYGQAIG----HIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G SQ GSLV LRFDF+ + + E+ +E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLMNAQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M L+ AK GA+A+FGEKY E+V++ S
Sbjct: 629 NIMDLEAAKAKGAMALFGEKYDERVRVLS 657
>gi|445162149|ref|ZP_21393713.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE8a]
gi|444868889|gb|ELX93500.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE8a]
Length = 876
Score = 575 bits (1483), Expect = e-161, Method: Compositional matrix adjust.
Identities = 315/689 (45%), Positives = 438/689 (63%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWFALPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ +G++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQAEGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +I+ +++ + D N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRTLIEAVAKVTGAT-----DLGNKSLRVIADHIRSCAFLVADGVLP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K F + IE+ ++K ++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAKE--------TFFYKLVGPLIEVMGSAGEELKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLQGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGFGADYNAM-IRVDSA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD L V +L V+GK V ++ G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDHLELNGKVTALFVDGKAVEAINAGQEAVVVLDQTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G AV + + +++G H G + G L+VG V+A VD R R +++H+ATH
Sbjct: 513 KGAGFTFAVDDTQKYGQAIG----HLGKLSAGALKVGDAVQADVDEARRARIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G +Q GSLV+ LRFDF+ + + +E+ E+E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVAQKGSLVSDKVLRFDFSHNEAMKPSEIREVEDLVNAQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M LD AK GA+A+FGEKY E+V++ S
Sbjct: 629 NIMDLDAAKAKGAMALFGEKYDERVRVLS 657
>gi|153829905|ref|ZP_01982572.1| alanyl-tRNA synthetase [Vibrio cholerae 623-39]
gi|148874593|gb|EDL72728.1| alanyl-tRNA synthetase [Vibrio cholerae 623-39]
Length = 860
Score = 575 bits (1482), Expect = e-161, Method: Compositional matrix adjust.
Identities = 313/686 (45%), Positives = 434/686 (63%), Gaps = 49/686 (7%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S D +R+ FL F+ S+GH+++ S+SLVP DPT+L T AGM QFK FLG R RA
Sbjct: 4 STDEVRRAFLSFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDCFLGLEKRAYTRAT 63
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
T+QRC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AIQ+AWEF T LP
Sbjct: 64 TAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIQYAWEFLTDVLQLPK 123
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG--------ADDNFWNSGATGPCGPCSE 215
RL ++VYE DDEAF+IWNK+VG+P + I R+G DNFW G TGPCGPC+E
Sbjct: 124 ERLLVTVYETDDEAFDIWNKKVGIPADRIIRIGDKKGGKKFDSDNFWQMGDTGPCGPCTE 183
Query: 216 IYYDF--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERI 273
I+YD H G D RFIE +N VFMQ+N+ DG++EPL + ++DTG+G+ERI
Sbjct: 184 IFYDHGEHIWGGPPGSPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPSVDTGMGIERI 243
Query: 274 ARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGV 333
+ I+Q V +NYE D+ +IK A++ + Y D TN +L+++ DH+R+ +L+ DGV
Sbjct: 244 SAIMQGVHSNYEIDVFQTLIKAAADA--IGY---QDLTNQSLRVVADHIRSCAFLIVDGV 298
Query: 334 FPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKA 393
PSN GRGYV+RR+IRRAVR G LG +G L G + +EL
Sbjct: 299 MPSNEGRGYVLRRIIRRAVRHGNKLGAQGAFFHKLVGPLAEVMGTAGVELK--------- 349
Query: 394 REQRILEELKR-EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTF 452
++Q ++E++ R EE F +TL+RG +L+ DAL + SG V L G+ F LYDT+
Sbjct: 350 KQQALVEKVLRIEEENFGRTLDRGMSILN----DALDQL--SGQV--LDGETVFKLYDTY 401
Query: 453 GFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEF 512
GFP ++T +VA E G S+D GF+ ME QR Q A A + D ++ L + +TEF
Sbjct: 402 GFPADLTNDVARERGFSIDEAGFEQAMEEQR---QRAREAGQFGTDYNS-LIKSATNTEF 457
Query: 513 LGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGT 572
GY +++V + V G V +S G ++L+ TPFYAESGGQ GD G L G
Sbjct: 458 CGYTASRGQSVVREMFVEGAEVSTLSAGDKAIIVLDNTPFYAESGGQCGDTGVLKTDAG- 516
Query: 573 NQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQ 632
+ V+D +K LG+ H G + +GVL G +V+AIVD K R ++H+ATHLL
Sbjct: 517 -----IFHVEDTQK-LGNAIAHHGVLAQGVLATGDQVDAIVDEKRRAAISLNHSATHLLH 570
Query: 633 AALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVM 692
AAL+KV+G+ +Q GSLV + LRFDF+ + E++E+ERL+N + + ++T +M
Sbjct: 571 AALRKVLGEHVAQKGSLVRAETLRFDFSHLEAMTAAEIKEVERLVNQEVRRNHSIETNIM 630
Query: 693 ALDDAKRAGAIAMFGEKYGEQVKISS 718
+D+AK GA+A+FGEKY +QV++ S
Sbjct: 631 NIDEAKAKGAMALFGEKYDDQVRVLS 656
>gi|15803211|ref|NP_289243.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EDL933]
gi|12517136|gb|AAG57801.1|AE005498_2 alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EDL933]
Length = 878
Score = 575 bits (1482), Expect = e-161, Method: Compositional matrix adjust.
Identities = 315/689 (45%), Positives = 436/689 (63%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +I+ +++ + D +N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRTLIQAVAKVTGAT-----DLSNKSLRVIADHIRSCAFLIADGVMP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K F + I++ D+K ++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAKE--------TFFYKLVGPLIDVMGSAGEDLKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGFGADYNAM-IRVDSA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD L V +L V+GK V ++ G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G N V + + +++G H G + G L+VG V+A VD R R +++H+ATH
Sbjct: 513 KGANFSFVVEDTQKYGQAIG----HIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G SQ GSLV LRFDF+ + + E+ +E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M L+ AK GA+A+FGEKY E+V++ S
Sbjct: 629 NIMDLEAAKAKGAMALFGEKYDERVRVLS 657
>gi|419829094|ref|ZP_14352583.1| alanine--tRNA ligase [Vibrio cholerae HC-1A2]
gi|422916260|ref|ZP_16950601.1| alanyl-tRNA synthetase [Vibrio cholerae HC-02A1]
gi|423816218|ref|ZP_17715204.1| alanine--tRNA ligase [Vibrio cholerae HC-55C2]
gi|423848281|ref|ZP_17718990.1| alanine--tRNA ligase [Vibrio cholerae HC-59A1]
gi|423878860|ref|ZP_17722598.1| alanine--tRNA ligase [Vibrio cholerae HC-60A1]
gi|423996680|ref|ZP_17739946.1| alanine--tRNA ligase [Vibrio cholerae HC-02C1]
gi|424015381|ref|ZP_17755231.1| alanine--tRNA ligase [Vibrio cholerae HC-55B2]
gi|424018492|ref|ZP_17758294.1| alanine--tRNA ligase [Vibrio cholerae HC-59B1]
gi|424623862|ref|ZP_18062342.1| alanyl-tRNA synthetase [Vibrio cholerae HC-50A1]
gi|424628438|ref|ZP_18066747.1| alanyl-tRNA synthetase [Vibrio cholerae HC-51A1]
gi|424632397|ref|ZP_18070516.1| alanyl-tRNA synthetase [Vibrio cholerae HC-52A1]
gi|424639396|ref|ZP_18077295.1| alanyl-tRNA synthetase [Vibrio cholerae HC-56A1]
gi|424647556|ref|ZP_18085236.1| alanyl-tRNA synthetase [Vibrio cholerae HC-57A1]
gi|443526415|ref|ZP_21092498.1| alanyl-tRNA synthetase [Vibrio cholerae HC-78A1]
gi|341640780|gb|EGS65359.1| alanyl-tRNA synthetase [Vibrio cholerae HC-02A1]
gi|408016147|gb|EKG53703.1| alanyl-tRNA synthetase [Vibrio cholerae HC-50A1]
gi|408021235|gb|EKG58500.1| alanyl-tRNA synthetase [Vibrio cholerae HC-52A1]
gi|408027103|gb|EKG64086.1| alanyl-tRNA synthetase [Vibrio cholerae HC-56A1]
gi|408037031|gb|EKG73439.1| alanyl-tRNA synthetase [Vibrio cholerae HC-57A1]
gi|408058939|gb|EKG93715.1| alanyl-tRNA synthetase [Vibrio cholerae HC-51A1]
gi|408622283|gb|EKK95271.1| alanine--tRNA ligase [Vibrio cholerae HC-1A2]
gi|408636889|gb|EKL09011.1| alanine--tRNA ligase [Vibrio cholerae HC-55C2]
gi|408644154|gb|EKL15860.1| alanine--tRNA ligase [Vibrio cholerae HC-60A1]
gi|408645266|gb|EKL16927.1| alanine--tRNA ligase [Vibrio cholerae HC-59A1]
gi|408854585|gb|EKL94338.1| alanine--tRNA ligase [Vibrio cholerae HC-02C1]
gi|408862028|gb|EKM01580.1| alanine--tRNA ligase [Vibrio cholerae HC-55B2]
gi|408870038|gb|EKM09320.1| alanine--tRNA ligase [Vibrio cholerae HC-59B1]
gi|443455264|gb|ELT19048.1| alanyl-tRNA synthetase [Vibrio cholerae HC-78A1]
Length = 860
Score = 575 bits (1482), Expect = e-161, Method: Compositional matrix adjust.
Identities = 314/687 (45%), Positives = 434/687 (63%), Gaps = 51/687 (7%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S D +R+ FL F+ S+GH+++ S+SLVP DPT+L T AGM QFK FLG R RA
Sbjct: 4 STDEVRRAFLSFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDCFLGLEKRAYTRAT 63
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
T+QRC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AIQ+AWEF T LP
Sbjct: 64 TAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIQYAWEFLTDVLQLPK 123
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG--------ADDNFWNSGATGPCGPCSE 215
RL ++VYE DDEAF+IWNK+VG+P + I R+G DNFW G TGPCGPC+E
Sbjct: 124 ERLLVTVYETDDEAFDIWNKKVGIPADRIIRIGDKKGGKKFDSDNFWQMGDTGPCGPCTE 183
Query: 216 IYYDFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLER 272
I+YD H D G D RFIE +N VFMQ+N+ DG++EPL + ++DTG+G+ER
Sbjct: 184 IFYD-HGDHIWGGPPGSPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPSVDTGMGIER 242
Query: 273 IARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDG 332
I+ I+Q V +NYE D+ +IK A+ + Y D TN +L+++ DH+R+ +L+ DG
Sbjct: 243 ISAIMQGVHSNYEIDVFQTLIKAAA--GAIGY---QDLTNQSLRVVADHIRSCAFLIVDG 297
Query: 333 VFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVK 392
V PSN GRGYV+RR+IRRAVR G LG +G L G + +EL
Sbjct: 298 VMPSNEGRGYVLRRIIRRAVRHGNKLGAQGAFFHKLVGPLAEVMGTAGVELK-------- 349
Query: 393 AREQRILEELKR-EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDT 451
++Q ++E++ R EE F +TL+RG +L+ DAL + SG V L G+ F LYDT
Sbjct: 350 -KQQALVEKVLRIEEENFGRTLDRGMSILN----DALDQL--SGQV--LDGETVFKLYDT 400
Query: 452 FGFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTE 511
+GFP ++T +VA E G S+D GF+ ME QR Q A A + D ++ L + +TE
Sbjct: 401 YGFPADLTNDVARERGFSIDEAGFEQAMEEQR---QRAREAGQFGTDYNS-LIKSSTNTE 456
Query: 512 FLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQG 571
F GY +++V + V G V +S G ++L+ TPFYAESGGQ GD G L G
Sbjct: 457 FCGYTASRGQSVVREMFVEGAEVSTLSAGDKAIIVLDNTPFYAESGGQCGDTGVLKTDAG 516
Query: 572 TNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLL 631
+ V+D +K LG+ H G + +GVL G +V+AIVD K R ++H+ATHLL
Sbjct: 517 ------IFHVEDTQK-LGNAIAHHGVLAQGVLATGDQVDAIVDEKRRAAISLNHSATHLL 569
Query: 632 QAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKV 691
AAL+KV+G+ +Q GSLV + LRFDF+ + E++E+ERL+N + + ++T +
Sbjct: 570 HAALRKVLGEHVAQKGSLVRAETLRFDFSHLEAMTAAEIKEVERLVNQEVRRNHSIETNI 629
Query: 692 MALDDAKRAGAIAMFGEKYGEQVKISS 718
M +D+AK GA+A+FGEKY +QV++ S
Sbjct: 630 MNIDEAKAKGAMALFGEKYDDQVRVLS 656
>gi|419939838|ref|ZP_14456622.1| alanyl-tRNA synthetase [Escherichia coli 75]
gi|388406212|gb|EIL66619.1| alanyl-tRNA synthetase [Escherichia coli 75]
Length = 876
Score = 575 bits (1482), Expect = e-161, Method: Compositional matrix adjust.
Identities = 316/689 (45%), Positives = 436/689 (63%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +I+ +++ + D +N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRTLIQAVAKVTGAT-----DLSNKSLRVIADHIRSCAFLIADGVMP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K F + I + D+K ++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAKE--------TFFYKLVGPLIGVMGSAGEDLKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGFGADYNAM-IRVDSA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD L V +L V+GK V ++ G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G N AV + + +++G H G + G L+VG V+A VD R R +++H+ATH
Sbjct: 513 KGANFSFAVEDTQKYGQAIG----HIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G SQ GSLV LRFDF+ + + E+ +E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNTQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M L+ AK GA+A+FGEKY E+V++ S
Sbjct: 629 NIMDLEAAKAKGAMALFGEKYDERVRVLS 657
>gi|340751721|ref|ZP_08688531.1| alanyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817]
gi|229420681|gb|EEO35728.1| alanyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817]
Length = 866
Score = 575 bits (1482), Expect = e-161, Method: Compositional matrix adjust.
Identities = 304/671 (45%), Positives = 428/671 (63%), Gaps = 39/671 (5%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
+G+ IRK F++F+ + HK SASL+P+DPT+LLT+AGM+ FKP FLG+ PR T
Sbjct: 3 TGNQIRKEFIEFFKKKNHKHFESASLIPDDPTLLLTVAGMVPFKPYFLGQKEAPYPRVTT 62
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
Q+ IRTND+ENVGRT+RHHTFFEMLGNFSFGDYFK+EAI W+WEF T GL ++LW+
Sbjct: 63 YQKSIRTNDLENVGRTARHHTFFEMLGNFSFGDYFKEEAIVWSWEFVTEVLGLDKDKLWV 122
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
SV+ DDEA +IW ++ P E I R+G D+N+W +G TG CGPCSEI+ D P G +
Sbjct: 123 SVFTTDDEAEKIWIEKCNFPKERIVRLGEDENWWAAGPTGSCGPCSEIHVDLGPAYGGDE 182
Query: 229 V----DLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNY 284
D G D RFIE +NLVF ++N+ +DGSLEPL +KNIDTG GLER+ ++Q NN+
Sbjct: 183 NSKLGDEGTDNRFIEIWNLVFTEWNRMEDGSLEPLPKKNIDTGAGLERVTAMVQGKSNNF 242
Query: 285 ETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVV 344
ETDL+FP++++A L N Y + ++ + +LK+I DH RA+ +L++DGV PSN GRGYV+
Sbjct: 243 ETDLLFPLVEEAGRLTNTKYGEDKEK-DFSLKVITDHSRAVTFLINDGVIPSNEGRGYVL 301
Query: 345 RRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKR 404
RR++RRAVR GRLL G+ L FL + +K +E+ D+ + I + +K
Sbjct: 302 RRILRRAVRHGRLL-----GQSEL---FLYKMVDKVVEMMNEAYPDLNDNLEHIKKVVKI 353
Query: 405 EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAE 464
EE +F +TL++G +L++Q + S E G +LSG F LYDT+GFP E+T+E+ E
Sbjct: 354 EEEKFSRTLDQGIQLVNQEIEKVKS---EGGK--KLSGDITFRLYDTYGFPYELTEEICE 408
Query: 465 EHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDS--ADLAEKIPDTEFLGYDTLSAKA 522
E GV V + F+ +ME Q+ +++AA V DS + +K T F+GY+TL A
Sbjct: 409 EKGVEVSREEFEAKMEEQKEKARAAREVVMEKGQDSFIEEFYDKYGATNFVGYETLKETA 468
Query: 523 IVESLLVNGKPVIKVSKGSDVEVLL--NRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVE 580
++ + +G D + L+ + TPFY ESGGQ D G V G + VV
Sbjct: 469 ----------KLLSIREGKDGKTLMIFDTTPFYGESGGQTADIG---VISGNGFEGKVV- 514
Query: 581 VKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIG 640
DV+K G +F H I +G + G E VD R +HTATHLL AL++V+G
Sbjct: 515 --DVQKQKG-IFTHTVEIVKGEAKEGEEYLLEVDEMNRLATAKNHTATHLLHKALREVLG 571
Query: 641 QETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRA 700
QAGSLV RLRFDFN + + E+E++E L+N I ++ + + M++D+AK+
Sbjct: 572 THVQQAGSLVNGQRLRFDFNHYEAMTSEEIEKVENLVNEKIAESLCVTVRNMSMDEAKKE 631
Query: 701 GAIAMFGEKYG 711
GA+A+FG+KYG
Sbjct: 632 GAMALFGDKYG 642
>gi|198245112|ref|YP_002216798.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Dublin str. CT_02021853]
gi|205353771|ref|YP_002227572.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|207858091|ref|YP_002244742.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
gi|375120290|ref|ZP_09765457.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Dublin str. SD3246]
gi|375124629|ref|ZP_09769793.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Gallinarum str. SG9]
gi|378956447|ref|YP_005213934.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Gallinarum/pullorum str. RKS5078]
gi|421360409|ref|ZP_15810685.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 622731-39]
gi|421363183|ref|ZP_15813425.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639016-6]
gi|421369506|ref|ZP_15819681.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 640631]
gi|421370147|ref|ZP_15820314.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-0424]
gi|421379112|ref|ZP_15829191.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-6]
gi|421383217|ref|ZP_15833255.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 485549-17]
gi|421385134|ref|ZP_15835157.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-22]
gi|421390081|ref|ZP_15840057.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-70]
gi|421396507|ref|ZP_15846432.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-26]
gi|421399286|ref|ZP_15849181.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-37]
gi|421405491|ref|ZP_15855321.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-46]
gi|421409812|ref|ZP_15859601.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-50]
gi|421415119|ref|ZP_15864855.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-1427]
gi|421417276|ref|ZP_15866986.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-2659]
gi|421420614|ref|ZP_15870290.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 78-1757]
gi|421428260|ref|ZP_15877871.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22510-1]
gi|421430702|ref|ZP_15880288.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 8b-1]
gi|421435870|ref|ZP_15885406.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648905 5-18]
gi|421440288|ref|ZP_15889768.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 6-18]
gi|421443654|ref|ZP_15893093.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 50-3079]
gi|421449125|ref|ZP_15898509.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 58-6482]
gi|436799480|ref|ZP_20523766.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS44]
gi|436807665|ref|ZP_20527708.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1882]
gi|436818557|ref|ZP_20535190.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1884]
gi|436832779|ref|ZP_20537069.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1594]
gi|436852873|ref|ZP_20542898.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1566]
gi|436861337|ref|ZP_20548521.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1580]
gi|436867432|ref|ZP_20552586.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1543]
gi|436872778|ref|ZP_20555660.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1441]
gi|436880552|ref|ZP_20560311.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1810]
gi|436891401|ref|ZP_20566101.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1558]
gi|436899691|ref|ZP_20571102.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1018]
gi|436903199|ref|ZP_20573663.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1010]
gi|436914712|ref|ZP_20579559.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1729]
gi|436919414|ref|ZP_20582195.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0895]
gi|436928705|ref|ZP_20587911.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0899]
gi|436938682|ref|ZP_20593469.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1457]
gi|436945756|ref|ZP_20597584.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1747]
gi|436955220|ref|ZP_20602095.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0968]
gi|436965954|ref|ZP_20606623.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1444]
gi|436969653|ref|ZP_20608650.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1445]
gi|436985155|ref|ZP_20614740.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1559]
gi|436994083|ref|ZP_20618652.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1565]
gi|437004736|ref|ZP_20621966.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1808]
gi|437022014|ref|ZP_20628142.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1811]
gi|437027288|ref|ZP_20630177.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0956]
gi|437043200|ref|ZP_20636713.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1455]
gi|437050877|ref|ZP_20641022.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1575]
gi|437062107|ref|ZP_20647473.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1725]
gi|437067023|ref|ZP_20650085.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1745]
gi|437073750|ref|ZP_20653192.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1791]
gi|437082834|ref|ZP_20658577.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1795]
gi|437096509|ref|ZP_20664874.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 576709]
gi|437110360|ref|ZP_20667706.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 635290-58]
gi|437118777|ref|ZP_20670512.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-16]
gi|437129319|ref|ZP_20675795.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-19]
gi|437135915|ref|ZP_20679553.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-2]
gi|437145946|ref|ZP_20685735.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-9]
gi|437153132|ref|ZP_20690238.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629163]
gi|437158939|ref|ZP_20693527.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE15-1]
gi|437168819|ref|ZP_20699257.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_N202]
gi|437176049|ref|ZP_20703225.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_56-3991]
gi|437184277|ref|ZP_20708142.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_76-3618]
gi|437264525|ref|ZP_20719801.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_81-2490]
gi|437269615|ref|ZP_20722858.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL909]
gi|437277827|ref|ZP_20727186.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL913]
gi|437302048|ref|ZP_20733382.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_69-4941]
gi|437315655|ref|ZP_20737343.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 638970-15]
gi|437327486|ref|ZP_20740428.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 17927]
gi|437341555|ref|ZP_20744678.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS4]
gi|437369099|ref|ZP_20749104.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22558]
gi|437408213|ref|ZP_20752369.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 22-17]
gi|437445557|ref|ZP_20758279.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 40-18]
gi|437463160|ref|ZP_20762842.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 1-1]
gi|437483922|ref|ZP_20769006.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 4-1]
gi|437495676|ref|ZP_20772820.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642046 4-7]
gi|437519258|ref|ZP_20778628.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648898 4-5]
gi|437526980|ref|ZP_20779988.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648899 3-17]
gi|437555801|ref|ZP_20784768.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648900 1-16]
gi|437574001|ref|ZP_20789663.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 1-17]
gi|437594209|ref|ZP_20795756.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 39-2]
gi|437605294|ref|ZP_20799473.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648902 6-8]
gi|437620337|ref|ZP_20804057.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648903 1-6]
gi|437644635|ref|ZP_20808720.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648904 3-6]
gi|437664752|ref|ZP_20814366.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 653049 13-19]
gi|437675421|ref|ZP_20816756.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 8-1]
gi|437710952|ref|ZP_20826630.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 42-20]
gi|437721551|ref|ZP_20829075.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 16-16]
gi|437796058|ref|ZP_20837573.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 76-2651]
gi|437808258|ref|ZP_20839963.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 33944]
gi|437864249|ref|ZP_20848039.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 6.0562-1]
gi|438094874|ref|ZP_20861829.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 81-2625]
gi|438101497|ref|ZP_20864324.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 62-1976]
gi|438116097|ref|ZP_20870616.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 53-407]
gi|438121009|ref|ZP_20872117.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Pullorum str. ATCC 9120]
gi|445130018|ref|ZP_21381065.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Gallinarum str. 9184]
gi|445145594|ref|ZP_21387556.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Dublin str. SL1438]
gi|445159875|ref|ZP_21393363.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Dublin str. HWS51]
gi|445185522|ref|ZP_21398975.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 20037]
gi|445220785|ref|ZP_21403039.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE10]
gi|445244885|ref|ZP_21408136.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 436]
gi|445336182|ref|ZP_21415624.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 18569]
gi|445351793|ref|ZP_21420526.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 13-1]
gi|445364902|ref|ZP_21425059.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. PT23]
gi|197939628|gb|ACH76961.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Dublin str. CT_02021853]
gi|205273552|emb|CAR38539.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|206709894|emb|CAR34247.1| Alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
gi|326624557|gb|EGE30902.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Dublin str. SD3246]
gi|326628879|gb|EGE35222.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Gallinarum str. SG9]
gi|357207058|gb|AET55104.1| Alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Gallinarum/pullorum str. RKS5078]
gi|395980976|gb|EJH90198.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 622731-39]
gi|395981629|gb|EJH90850.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 640631]
gi|395987644|gb|EJH96806.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639016-6]
gi|395995447|gb|EJI04512.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-6]
gi|395995451|gb|EJI04515.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 485549-17]
gi|396007317|gb|EJI16273.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-0424]
gi|396008961|gb|EJI17894.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-26]
gi|396015140|gb|EJI24023.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-70]
gi|396018766|gb|EJI27628.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-22]
gi|396023565|gb|EJI32363.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-46]
gi|396023745|gb|EJI32537.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-50]
gi|396027380|gb|EJI36143.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-37]
gi|396035154|gb|EJI43835.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-1427]
gi|396042111|gb|EJI50733.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-2659]
gi|396043659|gb|EJI52257.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 78-1757]
gi|396048295|gb|EJI56844.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22510-1]
gi|396054528|gb|EJI63020.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 8b-1]
gi|396056282|gb|EJI64758.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648905 5-18]
gi|396068423|gb|EJI76771.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 6-18]
gi|396069285|gb|EJI77623.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 50-3079]
gi|396070422|gb|EJI78750.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 58-6482]
gi|434943349|gb|ELL49487.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Pullorum str. ATCC 9120]
gi|434959510|gb|ELL52956.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS44]
gi|434968621|gb|ELL61373.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1882]
gi|434971101|gb|ELL63662.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1884]
gi|434981378|gb|ELL73265.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1594]
gi|434984218|gb|ELL75958.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1566]
gi|434985781|gb|ELL77468.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1580]
gi|434992584|gb|ELL84023.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1543]
gi|434999635|gb|ELL90809.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1441]
gi|435005396|gb|ELL96318.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1810]
gi|435005530|gb|ELL96450.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1558]
gi|435012826|gb|ELM03501.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1018]
gi|435019629|gb|ELM10073.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1010]
gi|435022794|gb|ELM13090.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1729]
gi|435029249|gb|ELM19307.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0895]
gi|435033395|gb|ELM23287.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0899]
gi|435034206|gb|ELM24096.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1457]
gi|435035328|gb|ELM25173.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1747]
gi|435045596|gb|ELM35222.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0968]
gi|435046364|gb|ELM35979.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1444]
gi|435058971|gb|ELM48278.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1445]
gi|435062785|gb|ELM51959.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1559]
gi|435064708|gb|ELM53828.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1565]
gi|435072027|gb|ELM60956.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1808]
gi|435077248|gb|ELM66004.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1811]
gi|435083850|gb|ELM72451.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1455]
gi|435085347|gb|ELM73900.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0956]
gi|435088591|gb|ELM77048.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1725]
gi|435093581|gb|ELM81921.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1575]
gi|435097829|gb|ELM86088.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1745]
gi|435107551|gb|ELM95534.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1791]
gi|435108010|gb|ELM95988.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 576709]
gi|435108407|gb|ELM96372.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1795]
gi|435118610|gb|ELN06261.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 635290-58]
gi|435126539|gb|ELN13933.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-19]
gi|435131499|gb|ELN18710.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-16]
gi|435136191|gb|ELN23281.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-9]
gi|435137461|gb|ELN24512.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-2]
gi|435140883|gb|ELN27825.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629163]
gi|435149296|gb|ELN35992.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_N202]
gi|435150414|gb|ELN37086.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE15-1]
gi|435156720|gb|ELN43210.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_56-3991]
gi|435159532|gb|ELN45850.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_81-2490]
gi|435160888|gb|ELN47130.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_76-3618]
gi|435172562|gb|ELN58105.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL909]
gi|435173223|gb|ELN58748.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL913]
gi|435178128|gb|ELN63364.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_69-4941]
gi|435180131|gb|ELN65239.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 638970-15]
gi|435191667|gb|ELN76223.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 17927]
gi|435193221|gb|ELN77700.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS4]
gi|435204948|gb|ELN88597.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 22-17]
gi|435207345|gb|ELN90818.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22558]
gi|435209946|gb|ELN93217.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 40-18]
gi|435217353|gb|ELN99787.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 4-1]
gi|435218437|gb|ELO00838.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 1-1]
gi|435226466|gb|ELO08031.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642046 4-7]
gi|435227563|gb|ELO09054.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648898 4-5]
gi|435242251|gb|ELO22562.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648900 1-16]
gi|435246055|gb|ELO26076.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 1-17]
gi|435247414|gb|ELO27365.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648899 3-17]
gi|435251534|gb|ELO31145.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 39-2]
gi|435257237|gb|ELO36531.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648902 6-8]
gi|435257566|gb|ELO36848.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648903 1-6]
gi|435265555|gb|ELO44383.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 653049 13-19]
gi|435273632|gb|ELO51897.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648904 3-6]
gi|435277509|gb|ELO55450.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 8-1]
gi|435288441|gb|ELO65460.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 42-20]
gi|435290855|gb|ELO67748.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 76-2651]
gi|435294363|gb|ELO70999.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 16-16]
gi|435299926|gb|ELO76021.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 33944]
gi|435314441|gb|ELO87866.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 81-2625]
gi|435324180|gb|ELO96113.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 62-1976]
gi|435327612|gb|ELO99263.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 53-407]
gi|435335949|gb|ELP06015.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 6.0562-1]
gi|444844416|gb|ELX69656.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Dublin str. HWS51]
gi|444846367|gb|ELX71548.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Dublin str. SL1438]
gi|444852409|gb|ELX77488.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Gallinarum str. 9184]
gi|444870040|gb|ELX94584.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 20037]
gi|444870488|gb|ELX94990.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE10]
gi|444874138|gb|ELX98404.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 13-1]
gi|444874270|gb|ELX98535.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 18569]
gi|444883112|gb|ELY07020.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. PT23]
gi|444890489|gb|ELY13818.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 436]
Length = 876
Score = 575 bits (1482), Expect = e-161, Method: Compositional matrix adjust.
Identities = 315/689 (45%), Positives = 438/689 (63%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWFALPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ +G++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQAEGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +I+ +++ + D N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRTLIEAVAKVTGAT-----DLGNKSLRVIADHIRSCAFLVADGVLP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K F + IE+ ++K ++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAKE--------TFFYKLVGPLIEVMGSAGEELKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLQGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGFGADYNAM-IRVDSA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD L V +L V+GK V ++ G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDHLELNGKVTALFVDGKAVEAINAGQEAVVVLDQTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G AV + + +++G H G + G L+VG V+A VD R R +++H+ATH
Sbjct: 513 KGAGFTFAVDDTQKYGQAIG----HLGKLSAGALKVGDAVQADVDEARRARIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G +Q GSLV+ LRFDF+ + + +E+ E+E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVAQKGSLVSDKVLRFDFSHNEAMKPSEIREVEDLVNAQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M LD AK GA+A+FGEKY E+V++ S
Sbjct: 629 NIMDLDAAKAKGAMALFGEKYDERVRVLS 657
>gi|418843370|ref|ZP_13398167.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19443]
gi|418856881|ref|ZP_13411517.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19470]
gi|418862499|ref|ZP_13417039.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19536]
gi|392816706|gb|EJA72628.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19443]
gi|392835766|gb|EJA91357.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19470]
gi|392835901|gb|EJA91490.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19536]
Length = 876
Score = 575 bits (1482), Expect = e-161, Method: Compositional matrix adjust.
Identities = 314/689 (45%), Positives = 438/689 (63%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWFALPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +I+ +++ + D N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRTLIEAVAKVTGAT-----DLGNKSLRVIADHIRSCAFLVADGVLP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K F + IE+ ++K ++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAKE--------TFFYKLVGPLIEVMGSAGEELKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLQGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGFGADYNAM-IRVDSA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD L V +L V+GK V ++ G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDHLELNGKVTALFVDGKAVEAINAGQEAVVVLDQTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G AV + + +++G H G + G L+VG V+A VD R R +++H+ATH
Sbjct: 513 KGAGFTFAVDDTQKYGQAIG----HLGKLSAGALKVGDAVQADVDEARRARIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G +Q GSLV+ LRFDF+ + + +E+ ++E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVAQKGSLVSDKVLRFDFSHNEAMKPSEIRQVEDLVNAQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M LD A+ GA+A+FGEKY E+V++ S
Sbjct: 629 NIMDLDAARAKGAMALFGEKYDERVRVLS 657
>gi|262401750|ref|ZP_06078316.1| alanyl-tRNA synthetase [Vibrio sp. RC586]
gi|262352167|gb|EEZ01297.1| alanyl-tRNA synthetase [Vibrio sp. RC586]
Length = 860
Score = 575 bits (1482), Expect = e-161, Method: Compositional matrix adjust.
Identities = 313/686 (45%), Positives = 434/686 (63%), Gaps = 49/686 (7%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S D +R+ FL F+ S+GH+++ S+SLVP DPT+L T AGM QFK FLG R RA
Sbjct: 4 STDEVRRAFLSFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDCFLGLEKRAYTRAT 63
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
T+QRC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AIQ+AWEF T LP
Sbjct: 64 TAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIQYAWEFLTDVLQLPK 123
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG--------ADDNFWNSGATGPCGPCSE 215
RL ++VYE DDEAF+IWNK+VG+P + I R+G DNFW G TGPCGPC+E
Sbjct: 124 ERLLVTVYETDDEAFDIWNKKVGIPADRIIRIGDKKGGKKFDSDNFWQMGDTGPCGPCTE 183
Query: 216 IYYDFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLER 272
I+YD H D G D RFIE +N VFMQ+N+ DG++EPL + ++DTG+G+ER
Sbjct: 184 IFYD-HGDHIWGGPPGSPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPSVDTGMGIER 242
Query: 273 IARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDG 332
I+ I+Q V +NYE D+ +IK A+E + Y D TN +L+++ DH+R+ +L+ DG
Sbjct: 243 ISAIMQGVHSNYEIDVFQTLIKAAAEA--IGY---QDLTNQSLRVVADHIRSCAFLIVDG 297
Query: 333 VFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVK 392
V PSN GRGYV+RR+IRRAVR G LG +GAF + E+ +++K
Sbjct: 298 VMPSNEGRGYVLRRIIRRAVRHGNKLGA--------QGAFFHKLVGPLAEVMGTAGAELK 349
Query: 393 AREQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTF 452
++ + + L+ EE F +TL+RG +L+ DAL + SG V L G+ F LYDT+
Sbjct: 350 KQQALVEKVLRIEEENFGRTLDRGMSILN----DALDQL--SGQV--LDGETVFKLYDTY 401
Query: 453 GFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEF 512
GFP ++T +VA E G S+D GF+ ME QR Q A A + D ++ L + +TEF
Sbjct: 402 GFPADLTNDVARERGFSIDEAGFEKAMEEQR---QRAREAGQFGTDYNS-LIKSATNTEF 457
Query: 513 LGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGT 572
GY +++V + V G V +S G ++L+ TPFYAESGGQ GD G L G
Sbjct: 458 CGYTASRGQSVVREMFVEGAEVSALSAGDKAIIVLDNTPFYAESGGQCGDTGVLKTEAG- 516
Query: 573 NQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQ 632
+ V+D K LG+ H G + +GVL G +V+AIVD + R ++H+ATHLL
Sbjct: 517 -----IFHVEDTHK-LGNAIAHHGVLAQGVLAKGDQVDAIVDEQRRAAISLNHSATHLLH 570
Query: 633 AALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVM 692
AAL+KV+G+ +Q GSLV + LRFDF+ + E++E+ERL+N I + ++T +M
Sbjct: 571 AALRKVLGEHVAQKGSLVRAETLRFDFSHLEAMTAAEIKEVERLVNQEIRRNHHIETNIM 630
Query: 693 ALDDAKRAGAIAMFGEKYGEQVKISS 718
+D+AK GA+A+FGEKY +QV++ S
Sbjct: 631 NIDEAKAKGAMALFGEKYDDQVRVLS 656
>gi|417123258|ref|ZP_11972168.1| alanine--tRNA ligase [Escherichia coli 97.0246]
gi|386146649|gb|EIG93094.1| alanine--tRNA ligase [Escherichia coli 97.0246]
Length = 876
Score = 575 bits (1481), Expect = e-161, Method: Compositional matrix adjust.
Identities = 314/689 (45%), Positives = 436/689 (63%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +I+ +++ + D +N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRTLIQAVAKVTGAT-----DLSNKSLRVIADHIRSCAFLIADGVMP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K F + I++ D+K ++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAKE--------TFFYKLVGPLIDVMGSAGEDLKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGFGADYNAM-IRVDSA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD L V +L V+GK V ++ G + V+L++TP+YAESGGQ+GD G L
Sbjct: 456 SEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPYYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G N V + + +++G H G + G L+VG V+A VD R R +++H+ATH
Sbjct: 513 KGANFSFVVEDTQKYGQAIG----HIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G SQ GSLV LRFDF+ + + E+ +E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M L+ AK GA+A+FGEKY E+V++ S
Sbjct: 629 NIMDLEAAKAKGAMALFGEKYDERVRVLS 657
>gi|303249632|ref|ZP_07335837.1| alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
str. Femo]
gi|307252204|ref|ZP_07534102.1| Alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
str. Femo]
gi|302651444|gb|EFL81595.1| alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
str. Femo]
gi|306860348|gb|EFM92363.1| Alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
str. Femo]
Length = 874
Score = 575 bits (1481), Expect = e-161, Method: Compositional matrix adjust.
Identities = 307/681 (45%), Positives = 434/681 (63%), Gaps = 50/681 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH V+PS+SLVPE DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 7 IRQSFLDFFHSKGHTVVPSSSLVPENDPTLLFTNAGMNQFKDVFLGLEKRPYTRATTAQR 66
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEM+GNFSFGDYFK +AIQ+ WE+ T GLP +
Sbjct: 67 CVRAGGKHNDLENVGYTARHHTFFEMMGNFSFGDYFKHDAIQFGWEYLTSPQWLGLPKEK 126
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
L+++VYE DDEA++IWNK VGVP +HI R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 127 LYVTVYETDDEAYDIWNKIVGVPTDHIIRIGDNKGAPYASDNFWAMGDTGPCGPCTEIFY 186
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H + G D R+IE +N+VFMQ+N+ DG++E L + ++DTG+GLER+
Sbjct: 187 D-HGETFWGGLPGSPEEDGDRYIEVWNIVFMQFNRLADGTMEKLPKPSVDTGMGLERMTA 245
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
++Q V +NYETD+ +IK+ + L NVS D N +L+++ DH+RA YL++DGV P
Sbjct: 246 VMQHVNSNYETDIFQTLIKEVAGLLNVS-----DLDNKSLRVVADHIRACSYLIADGVVP 300
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN GRGYV+RR+IRRAVR G LLG K AF + + H + ++
Sbjct: 301 SNEGRGYVLRRIIRRAVRHGNLLGAKE--------AFFYKLVPTLATVMGHAGEVLTQKQ 352
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
I + LK EE +F +TLERG LL+ DAL++ + LSG+ AF LYDT+GFP
Sbjct: 353 AHIQKTLKAEEEQFARTLERGLALLE----DALTKVENN----TLSGEVAFKLYDTYGFP 404
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGY 515
+++T +V E +++D GF+ EM QR +++A+ N D ++ + T+F+GY
Sbjct: 405 LDLTADVCREREITIDEAGFEAEMTAQRERAKASSNFGA----DYNNVIKVEGQTDFIGY 460
Query: 516 DTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
D L+A+A + L NGK V + G ++L++TPFYAE GGQ+GD G + + +
Sbjct: 461 DNLAAQATIVGLFSNGKAVDTIQSGESAVIILDQTPFYAEMGGQVGDSGLI------STE 514
Query: 576 TAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAAL 635
V D +K G VF H G + G L +G +V A VD R +H+ATHLL +AL
Sbjct: 515 ICNFAVNDTQK-YGQVFGHIGQLTSGSLSIGDKVTATVDATRRVAITANHSATHLLHSAL 573
Query: 636 KKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALD 695
++V+G +Q GSLV+ + LRFDF+ + ++LEEIER++N I + + + M ++
Sbjct: 574 REVLGDHVAQKGSLVSENILRFDFSQPEAISKSQLEEIERIVNRKIRENIQVTIETMDIE 633
Query: 696 DAKRAGAIAMFGEKYGEQVKI 716
AK+ GA+A+FGEKYG+ V++
Sbjct: 634 SAKKKGAMALFGEKYGDVVRV 654
>gi|417309142|ref|ZP_12095981.1| Alanyl-tRNA synthetase [Escherichia coli PCN033]
gi|338769122|gb|EGP23903.1| Alanyl-tRNA synthetase [Escherichia coli PCN033]
Length = 876
Score = 575 bits (1481), Expect = e-161, Method: Compositional matrix adjust.
Identities = 314/683 (45%), Positives = 431/683 (63%), Gaps = 50/683 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYVSDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +I+ +++ + D +N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRTLIQAVAKVTGAT-----DLSNKSLRVIADHIRSCAFLIADGVMP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K F + I++ D+K ++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAKE--------TFFYKLVGPLIDVMGSAGEDLKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGY 515
V++T +V E + VD GF+ ME QRR+ A A D +A + +EF GY
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRR---AREASGFGADYNA-MIRVNSASEFKGY 461
Query: 516 DTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
D L V +L V+GK V ++ G + V+L++TPFYAESGGQ+GD G L +G N
Sbjct: 462 DHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGEL---KGANFS 518
Query: 576 TAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAAL 635
AV + + +++G H G + G L+VG V+A VD R R +++H+ATHL+ AAL
Sbjct: 519 FAVEDTQKYGQAIG----HIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATHLMHAAL 574
Query: 636 KKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALD 695
++V+G SQ GSLV LRFDF+ + + E+ +E L+N I ++T +M L+
Sbjct: 575 RQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNLPIETNIMDLE 634
Query: 696 DAKRAGAIAMFGEKYGEQVKISS 718
AK GA+A+FGEKY E+V++ S
Sbjct: 635 AAKAKGAMALFGEKYDERVRVLS 657
>gi|432373270|ref|ZP_19616308.1| alanyl-tRNA synthetase [Escherichia coli KTE11]
gi|430895276|gb|ELC17547.1| alanyl-tRNA synthetase [Escherichia coli KTE11]
Length = 876
Score = 575 bits (1481), Expect = e-161, Method: Compositional matrix adjust.
Identities = 320/693 (46%), Positives = 443/693 (63%), Gaps = 70/693 (10%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR------GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLER 272
D H D G ++ D GD R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLER
Sbjct: 188 D-HGDHIWGGPPGSAEED-GD--RYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLER 243
Query: 273 IARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDG 332
IA +LQ V +NY+ DL +I+ +++ + D +N +L++I DH+R+ +L++DG
Sbjct: 244 IAAVLQHVNSNYDIDLFRTLIQAVAKVTGAT-----DLSNKSLRVIADHIRSCAFLIADG 298
Query: 333 VFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVK 392
V PSN RGYV+RR+IRRAVR G +LG K F + I++ D+K
Sbjct: 299 VMPSNENRGYVLRRIIRRAVRHGNMLGAKE--------TFFYKLVGPLIDVMGSAGEDLK 350
Query: 393 AREQRILEE-LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDT 451
R+Q ++E+ LK EE +F +TLERG LLD+ LA T L G+ AF LYDT
Sbjct: 351 -RQQALVEQVLKTEEEQFARTLERGLALLDEELAKLSGDT--------LDGETAFRLYDT 401
Query: 452 FGFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAE 505
+GFPV++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGFGADYNAM-IRVDSA----- 455
Query: 506 KIPDTEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGF 565
+EF GYD L V +L V+GK V ++ G + V+L++TPFYAESGGQ+GD G
Sbjct: 456 ----SEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGE 511
Query: 566 LYVTQGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHH 625
L +G + AV + + +++G H G + G L+VG V+A VD R R +++H
Sbjct: 512 L---KGASFSFAVEDTQKYGQAIG----HIGKLAAGSLKVGDAVQADVDEARRARIRLNH 564
Query: 626 TATHLLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDAN 685
+ATHL+ AAL++V+G SQ GSLV LRFDF+ + + E+ +E L+N I
Sbjct: 565 SATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNL 624
Query: 686 LLQTKVMALDDAKRAGAIAMFGEKYGEQVKISS 718
++T +M L+ AK GA+A+FGEKY E+V++ S
Sbjct: 625 PIETNIMDLEAAKAKGAMALFGEKYDERVRVLS 657
>gi|418488215|ref|ZP_13056079.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035278]
gi|366069940|gb|EHN34058.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035278]
Length = 748
Score = 575 bits (1481), Expect = e-161, Method: Compositional matrix adjust.
Identities = 315/689 (45%), Positives = 438/689 (63%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWFALPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +I+ +++ + D N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRTLIEAVAKVTGAT-----DLGNKSLRVIADHIRSCAFLVADGVLP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K F + IE+ ++K ++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAKE--------TFFYKLVGPLIEVMGSAGEELKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLQGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGFGADYNAM-IRVDSA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD L V +L V+GK V ++ G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDHLELNGKVTALFVDGKAVEAINAGQEAVVVLDQTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G AV + + +++G H G + G L+VG V+A VD R R +++H+ATH
Sbjct: 513 KGAGFTFAVDDTQKYGQAIG----HLGKLSAGALKVGDAVQADVDEARRARIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G +Q GSLV+ LRFDF+ + + +E+ ++E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVAQKGSLVSDKVLRFDFSHNEAMKPSEIRQVEDLVNAQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M LD AK GA+A+FGEKY E+V++ S
Sbjct: 629 NIMDLDAAKAKGAMALFGEKYDERVRVLS 657
>gi|437840981|ref|ZP_20846494.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SARB17]
gi|435296799|gb|ELO73150.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SARB17]
Length = 876
Score = 575 bits (1481), Expect = e-161, Method: Compositional matrix adjust.
Identities = 315/689 (45%), Positives = 438/689 (63%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWFALPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +I+ +++ + D N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRTLIEAVAKVTGAT-----DLGNKSLRVIADHIRSCAFLVADGVLP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K F + IE+ ++K ++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAKE--------TFFYKLVGPLIEVMGSAGEELKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLQGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGFGADYNAM-IRVDSA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD L V +L V+GK V ++ G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDHLELNGKVTALFVDGKAVEVINAGQEAVVVLDQTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G AV + + +++G H G + G L+VG V+A VD R R +++H+ATH
Sbjct: 513 KGAGFTFAVDDTQKYGQAIG----HLGKLSAGALKVGDAVQADVDEARRARIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G +Q GSLV+ LRFDF+ + + +E+ E+E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVAQKGSLVSDKVLRFDFSHNEAMKPSEIREVEDLVNAQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M L+ AK GA+A+FGEKY E+V++ S
Sbjct: 629 NIMDLEAAKAKGAMALFGEKYDERVRVLS 657
>gi|254226851|ref|ZP_04920422.1| alanyl-tRNA synthetase [Vibrio cholerae V51]
gi|125620648|gb|EAZ49011.1| alanyl-tRNA synthetase [Vibrio cholerae V51]
Length = 860
Score = 575 bits (1481), Expect = e-161, Method: Compositional matrix adjust.
Identities = 313/687 (45%), Positives = 435/687 (63%), Gaps = 51/687 (7%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S D +R+ FL F+ S+GH+++ S+SLVP DPT+L T AGM QFK FLG R RA
Sbjct: 4 STDEVRRAFLSFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDCFLGLEKRAYTRAT 63
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
T+QRC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AIQ+AWEF T LP
Sbjct: 64 TAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIQYAWEFLTDVLQLPK 123
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG--------ADDNFWNSGATGPCGPCSE 215
RL ++VYE DDEAF+IWNK+VG+P + I R+G DNFW G TGPCGPC+E
Sbjct: 124 ERLLVTVYETDDEAFDIWNKKVGIPADRIIRIGDKKGGKKFDSDNFWQMGDTGPCGPCTE 183
Query: 216 IYYDFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLER 272
I+YD H D G D RFIE +N VFMQ+N+ DG++EPL + ++DTG+G+ER
Sbjct: 184 IFYD-HGDHIWGGPPGSPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPSVDTGMGIER 242
Query: 273 IARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDG 332
I+ I+Q V +NYE D+ +IK A++ + Y D TN +L+++ DH+R+ +L+ DG
Sbjct: 243 ISAIMQGVHSNYEIDVFQTLIKAAADA--IGY---QDLTNQSLRVVADHIRSCAFLIVDG 297
Query: 333 VFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVK 392
V PSN GRGYV+RR+IRRAVR G LG +G L G + +EL
Sbjct: 298 VMPSNEGRGYVLRRIIRRAVRHGNKLGAQGAFFHKLVGPLAEVMGTAGVELK-------- 349
Query: 393 AREQRILEELKR-EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDT 451
++Q ++E++ R EE F +TL+RG +L+ DAL + SG V L G+ F LYDT
Sbjct: 350 -KQQALVEKVLRIEEENFGRTLDRGMSILN----DALDQL--SGQV--LDGETVFKLYDT 400
Query: 452 FGFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTE 511
+GFP ++T +VA E G S+D GF+ ME QR Q A A + D ++ L + +TE
Sbjct: 401 YGFPADLTNDVARERGFSIDEAGFEQAMEEQR---QRAREAGQFGTDYNS-LIKSATNTE 456
Query: 512 FLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQG 571
F GY +++V + V G + +S G ++L+ TPFYAESGGQ GD G L G
Sbjct: 457 FCGYTASRGQSVVREMFVEGAEISTLSAGDKAIIVLDNTPFYAESGGQCGDTGVLKTDAG 516
Query: 572 TNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLL 631
+ V+D +K LG+ H G + +GVL G +V+AIVD K R ++H+ATHLL
Sbjct: 517 ------IFYVEDTQK-LGNAIAHHGVLAQGVLATGDQVDAIVDEKRRAAISLNHSATHLL 569
Query: 632 QAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKV 691
AAL+KV+G+ +Q GSLV + LRFDF+ + E++E+ERL+N + + ++T +
Sbjct: 570 HAALRKVLGEHVAQKGSLVRAETLRFDFSHLEAMTAAEIKEVERLVNQEVRRNHSIETNI 629
Query: 692 MALDDAKRAGAIAMFGEKYGEQVKISS 718
M +D+AK GA+A+FGEKY +QV++ S
Sbjct: 630 MNIDEAKAKGAMALFGEKYDDQVRVLS 656
>gi|420381728|ref|ZP_14881168.1| alanyl-tRNA synthetase [Shigella dysenteriae 225-75]
gi|391299235|gb|EIQ57199.1| alanyl-tRNA synthetase [Shigella dysenteriae 225-75]
Length = 876
Score = 575 bits (1481), Expect = e-161, Method: Compositional matrix adjust.
Identities = 315/689 (45%), Positives = 436/689 (63%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW K+V +P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYESDDEAYEIWEKDVEIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +I+ +++ + D +N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRTLIQAVAKVTGAT-----DLSNKSLRVIADHIRSCAFLIADGVMP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K F + I++ D+K ++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAKE--------TFFYKLVGPLIDVMGSAGEDLKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GFD ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFDAAMEEQRRRAREASGFGADYNAM-IRVDSA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD L V +L V+GK V ++ G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G N AV + + +++G H G + G L+VG V+A VD R R +++H+ATH
Sbjct: 513 KGANFSFAVEDTQKYGQAIG----HIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G SQ GSLV LRFDF+ + + E+ +E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M L+ AK GA+A+FGEKY E+V++ S
Sbjct: 629 NIMDLEAAKAKGAMALFGEKYDERVRVLS 657
>gi|157148231|ref|YP_001455550.1| alanyl-tRNA synthetase [Citrobacter koseri ATCC BAA-895]
gi|205830024|sp|A8ANQ1.1|SYA_CITK8 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|157085436|gb|ABV15114.1| hypothetical protein CKO_04048 [Citrobacter koseri ATCC BAA-895]
Length = 875
Score = 575 bits (1481), Expect = e-161, Method: Compositional matrix adjust.
Identities = 314/689 (45%), Positives = 439/689 (63%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP +R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWFALPKDR 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYETDDEAYEIWEKEVGIPRERIIRIGDNKGAAYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NYE DL +I+ +++ + D +N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYEIDLFRTLIEAVAKVTGAT-----DLSNKSLRVIADHIRSCAFLIADGVVP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K F + I++ ++K ++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAKE--------TFFYKLVGPLIDVMGSAGEELKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGFGADYNAM-IRVDGA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD L V +L V+GK V +S G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDHLELNGKVTALFVDGKAVDAISAGQEAVVVLDQTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G AV + + +++G H GT+ G L+VG V+A VD R R +++H+ATH
Sbjct: 513 KGAGFAFAVSDTQKYGQAIG----HIGTLSTGSLKVGDAVQADVDDARRARIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++++G +Q GSLV LRFDF+ + + +E+ +E L+N I ++T
Sbjct: 569 LMHAALRQILGTHVAQKGSLVNDKVLRFDFSHNEAMKPSEIRAVEDLVNAQIRRNLPVET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M L+ AK GA+A+FGEKY ++V++ S
Sbjct: 629 NIMDLEAAKAKGAMALFGEKYDDRVRVLS 657
>gi|387888227|ref|YP_006318525.1| alanyl-tRNA synthetase [Escherichia blattae DSM 4481]
gi|414595434|ref|ZP_11445055.1| alanyl-tRNA synthetase [Escherichia blattae NBRC 105725]
gi|386923060|gb|AFJ46014.1| alanyl-tRNA synthetase [Escherichia blattae DSM 4481]
gi|403193598|dbj|GAB82707.1| alanyl-tRNA synthetase [Escherichia blattae NBRC 105725]
Length = 875
Score = 574 bits (1480), Expect = e-161, Method: Compositional matrix adjust.
Identities = 320/692 (46%), Positives = 441/692 (63%), Gaps = 68/692 (9%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVSSSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRSYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AI +AWE T F LP +R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAINFAWELLTGAQWFNLPKDR 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEAF+IW EVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYETDDEAFDIWANEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR------GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLER 272
D H D G ++ D GD R+IE +N+VFMQ+N++ DG++ PL + ++DTG+GLER
Sbjct: 188 D-HGDHIWGGPPGSAEED-GD--RYIEIWNIVFMQFNRQSDGTMLPLPKPSVDTGMGLER 243
Query: 273 IARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDG 332
IA +LQ V +NY+ DL F I+ KA +A+V+ AQ D ++ +L++I DH+R+ +L++DG
Sbjct: 244 IAAVLQHVNSNYDIDL-FRILIKA--VADVTGAQ--DLSSKSLRVIADHIRSCAFLIADG 298
Query: 333 VFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVK 392
V PSN RGYV+RR+IRRAVR G +LG K F + I++ D+K
Sbjct: 299 VLPSNENRGYVLRRIIRRAVRHGNMLGAKD--------TFFYKLVGPLIDVMGSAGDDLK 350
Query: 393 AREQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTF 452
+++ + + LK EE +F +TLERG LLD L T L G+ AF LYDT+
Sbjct: 351 RQQEMVEQVLKTEEEQFARTLERGLALLDDELTQLKGDT--------LDGETAFRLYDTY 402
Query: 453 GFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAEK 506
GFP+++T +V E + VD GF+ ME QRR+++ + +N++ + VD +
Sbjct: 403 GFPLDLTADVCRERNIKVDEAGFNAAMETQRRRARESSGFGTDYNSM-IRVDTA------ 455
Query: 507 IPDTEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFL 566
+EF GYDTL + +L V+GK V +V+ G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 ---SEFKGYDTLDLNGTITALFVDGKSVDQVNPGQEAVVVLDKTPFYAESGGQVGDKGEL 512
Query: 567 YVTQGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHT 626
GT Q V D +K G H+GT+ GVL VG VEA VD R R +++H+
Sbjct: 513 KAASGTFQ------VTDTQK-YGQAIGHQGTLSHGVLTVGDRVEAQVDEARRARIRLNHS 565
Query: 627 ATHLLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANL 686
ATHL+ AAL++V+G +Q GSLV LRFDF+ + E+ +E L+N I
Sbjct: 566 ATHLMHAALRQVLGTHVAQKGSLVNDKALRFDFSHFEGMKAEEIRAVEDLVNAQIRRNLP 625
Query: 687 LQTKVMALDDAKRAGAIAMFGEKYGEQVKISS 718
++T +M L++AK GA+A+FGEKY + V++ S
Sbjct: 626 VETNIMDLEEAKAKGAMALFGEKYDDHVRVLS 657
>gi|300722254|ref|YP_003711538.1| alanyl-tRNA synthetase [Xenorhabdus nematophila ATCC 19061]
gi|297628755|emb|CBJ89333.1| alanyl-tRNA synthetase [Xenorhabdus nematophila ATCC 19061]
Length = 875
Score = 574 bits (1480), Expect = e-161, Method: Compositional matrix adjust.
Identities = 310/688 (45%), Positives = 436/688 (63%), Gaps = 60/688 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ ++GH+V+PS+SLVP DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 8 IRQAFLDFFHTKGHQVVPSSSLVPTNDPTLLFTNAGMNQFKDVFLGLDKRPYSRATTAQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI++AWE T E F LP +
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAIKYAWELLTSEKWFNLPKEK 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA++IW+KEVGVP E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYETDDEAYDIWHKEVGVPTERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DF--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARI 276
D H G D R+IE +N+VFMQ+N+ DG++EPL + ++DTG+GLERI +
Sbjct: 188 DHGEHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRHVDGTMEPLPKPSVDTGMGLERITAV 247
Query: 277 LQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPS 336
LQ V +NYE DL +I +++ + D TN +L+++ DH+RA +L+ DGV PS
Sbjct: 248 LQHVNSNYEIDLFQSLIASVADVTGAT-----DLTNKSLRVVADHIRACAFLICDGVVPS 302
Query: 337 NIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQ 396
N RGYV+RR+IRRAVR G +LG K AF + I++ ++K ++
Sbjct: 303 NENRGYVLRRIIRRAVRHGNMLGAKE--------AFFYKLVAPLIKIMGAAGEELKQQQA 354
Query: 397 RILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPV 456
+ + LK EE +F +TLERG +LLD+ LA T L G+ AF LYDT+GFPV
Sbjct: 355 LVEQVLKTEEEQFARTLERGLQLLDEELAKLSGDT--------LDGETAFRLYDTYGFPV 406
Query: 457 EITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAEKIPDT 510
++T +V E + VD GF++ MENQRR+++ + +N + + VD S+D
Sbjct: 407 DLTADVCRERNIKVDEAGFEMAMENQRRRARESSGFGTDYNEL-IKVDGSSD-------- 457
Query: 511 EFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQ 570
F GY+ S +AIV ++ NG+ V ++ G + V+L++T FYAESGGQ GD G L +
Sbjct: 458 -FCGYEHNSQQAIVTAIFRNGESVEQIHAGEEAVVILDKTAFYAESGGQAGDMGHLLNSD 516
Query: 571 GTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHL 630
G V EV D +K V H G + G+L V V A +D R +++H+ATHL
Sbjct: 517 G------VFEVLDTQK-YAQVIGHIGKLTSGILAVNHTVNAEIDVVRRDAIRLNHSATHL 569
Query: 631 LQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTK 690
L AAL++++G+ +Q GSLV LRFDF+ + ++ ++E L+N I + + T+
Sbjct: 570 LHAALRQILGEHVAQKGSLVNDKYLRFDFSHFEAMKSEQIRQVENLVNEEIRKNSPVVTE 629
Query: 691 VMALDDAKRAGAIAMFGEKYGEQVKISS 718
+MAL+DAK GA+A+FGEKY E+V++ S
Sbjct: 630 LMALEDAKSKGAMALFGEKYDEKVRVLS 657
>gi|437696160|ref|ZP_20822377.1| alanyl-tRNA ligase, partial [Salmonella enterica subsp. enterica
serovar Enteritidis str. 561362 9-7]
gi|435277086|gb|ELO55044.1| alanyl-tRNA ligase, partial [Salmonella enterica subsp. enterica
serovar Enteritidis str. 561362 9-7]
Length = 751
Score = 574 bits (1480), Expect = e-161, Method: Compositional matrix adjust.
Identities = 315/689 (45%), Positives = 438/689 (63%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWFALPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ +G++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQAEGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +I+ +++ + D N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRTLIEAVAKVTGAT-----DLGNKSLRVIADHIRSCAFLVADGVLP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K F + IE+ ++K ++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAKE--------TFFYKLVGPLIEVMGSAGEELKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLQGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGFGADYNAM-IRVDSA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD L V +L V+GK V ++ G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDHLELNGKVTALFVDGKAVEAINAGQEAVVVLDQTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G AV + + +++G H G + G L+VG V+A VD R R +++H+ATH
Sbjct: 513 KGAGFTFAVDDTQKYGQAIG----HLGKLSAGALKVGDAVQADVDEARRARIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G +Q GSLV+ LRFDF+ + + +E+ E+E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVAQKGSLVSDKVLRFDFSHNEAMKPSEIREVEDLVNAQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M LD AK GA+A+FGEKY E+V++ S
Sbjct: 629 NIMDLDAAKAKGAMALFGEKYDERVRVLS 657
>gi|432466839|ref|ZP_19708925.1| alanyl-tRNA synthetase [Escherichia coli KTE205]
gi|433073883|ref|ZP_20260531.1| alanyl-tRNA synthetase [Escherichia coli KTE129]
gi|433184358|ref|ZP_20368600.1| alanyl-tRNA synthetase [Escherichia coli KTE85]
gi|430992636|gb|ELD09005.1| alanyl-tRNA synthetase [Escherichia coli KTE205]
gi|431586494|gb|ELI57886.1| alanyl-tRNA synthetase [Escherichia coli KTE129]
gi|431704459|gb|ELJ69085.1| alanyl-tRNA synthetase [Escherichia coli KTE85]
Length = 876
Score = 574 bits (1480), Expect = e-161, Method: Compositional matrix adjust.
Identities = 315/689 (45%), Positives = 436/689 (63%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCG C+EI+Y
Sbjct: 128 LWVTVYESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGSCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +I+ +++ + D +N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRTLIQAVAKVTGAT-----DLSNKSLRVIADHIRSCAFLIADGVMP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K F + I++ D+K ++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAKE--------TFFYKLVGPLIDVMGSAGEDLKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGFGADYNAM-IRVDSA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD L V +L V+GK V ++ G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G N AV + + +++G H G + G L+VG V+A VD R R +++H+ATH
Sbjct: 513 KGANFSFAVEDTQKYGQAIG----HIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G SQ GSLV LRFDF+ + + E+ +E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M L+ AK GA+A+FGEKY E+V++ S
Sbjct: 629 NIMDLEAAKAKGAMALFGEKYDERVRVLS 657
>gi|262172368|ref|ZP_06040046.1| alanyl-tRNA synthetase [Vibrio mimicus MB-451]
gi|261893444|gb|EEY39430.1| alanyl-tRNA synthetase [Vibrio mimicus MB-451]
Length = 860
Score = 574 bits (1480), Expect = e-161, Method: Compositional matrix adjust.
Identities = 315/687 (45%), Positives = 434/687 (63%), Gaps = 51/687 (7%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S D +R+ FL F+ S+GH+++ S+SLVP DPT+L T AGM QFK FLG R RA
Sbjct: 4 STDEVRRAFLSFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDCFLGLEKRAYTRAT 63
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
T+QRC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AIQ+AWEF T LP
Sbjct: 64 TAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIQYAWEFLTGVLQLPK 123
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG--------ADDNFWNSGATGPCGPCSE 215
RL ++VYE DDEAF+IWNK+VG+P + I R+G DNFW G TGPCGPC+E
Sbjct: 124 ERLLVTVYETDDEAFDIWNKKVGIPADRIIRIGDKKGGKKFDSDNFWQMGDTGPCGPCTE 183
Query: 216 IYYDFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLER 272
I+YD H D G D RFIE +N VFMQ+N+ DG++EPL + ++DTG+G+ER
Sbjct: 184 IFYD-HGDHIWGGPPGSPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPSVDTGMGIER 242
Query: 273 IARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDG 332
I+ I+Q V +NYE D+ +IK A++ + Y D TN +L+++ DH+R+ +L+ DG
Sbjct: 243 ISAIMQGVHSNYEIDVFQTLIKAAADA--IGY---QDLTNQSLRVVADHIRSCAFLIVDG 297
Query: 333 VFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVK 392
V PSN GRGYV+RR+IRRAVR G LG +G L G + +EL
Sbjct: 298 VMPSNEGRGYVLRRIIRRAVRHGNKLGAQGAFFHKLVGPLAEVMGTAGVELK-------- 349
Query: 393 AREQRILEELKR-EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDT 451
++Q ++E++ R EE F +TL+RG +L++ L D L SG V L G+ F LYDT
Sbjct: 350 -KQQALVEKVLRIEEENFGRTLDRGMSILNEAL-DQL-----SGQV--LDGETVFKLYDT 400
Query: 452 FGFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTE 511
+GFP ++T +VA E G S+D GF+ ME QR Q A A + D ++ L + +TE
Sbjct: 401 YGFPADLTNDVARERGFSIDETGFEQAMEEQR---QRAREAGQFGTDYNS-LIKSATNTE 456
Query: 512 FLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQG 571
F GY +++V + V G V +S G ++L+ TPFYAESGGQ GD G L G
Sbjct: 457 FCGYTASRGQSVVREIFVEGAEVSALSAGDKAIIVLDNTPFYAESGGQCGDTGVLKTEAG 516
Query: 572 TNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLL 631
V V+D K LG+ H G + +GVL G +V+AIVD + R ++H+ATHLL
Sbjct: 517 ------VFHVEDTHK-LGNAIAHHGVLAQGVLAKGDQVDAIVDEQRRAAISLNHSATHLL 569
Query: 632 QAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKV 691
AAL+KV+G+ +Q GSLV + LRFDF+ + E++E+ERL+N I + ++T +
Sbjct: 570 HAALRKVLGEHVAQKGSLVRAETLRFDFSHLEAMTAAEIKEVERLVNQEIRRNHSIETNI 629
Query: 692 MALDDAKRAGAIAMFGEKYGEQVKISS 718
M +D+AK GA+A+FGEKY +QV++ S
Sbjct: 630 MNIDEAKAKGAMALFGEKYDDQVRVLS 656
>gi|82545227|ref|YP_409174.1| alanyl-tRNA synthetase [Shigella boydii Sb227]
gi|416294458|ref|ZP_11650882.1| Alanyl-tRNA synthetase [Shigella flexneri CDC 796-83]
gi|417683289|ref|ZP_12332636.1| alanyl-tRNA synthetase [Shigella boydii 3594-74]
gi|420354261|ref|ZP_14855349.1| alanyl-tRNA synthetase [Shigella boydii 4444-74]
gi|421683857|ref|ZP_16123647.1| alanyl-tRNA synthetase [Shigella flexneri 1485-80]
gi|123558824|sp|Q31X62.1|SYA_SHIBS RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|81246638|gb|ABB67346.1| alanyl-tRNA synthetase [Shigella boydii Sb227]
gi|320186483|gb|EFW61211.1| Alanyl-tRNA synthetase [Shigella flexneri CDC 796-83]
gi|332091817|gb|EGI96895.1| alanyl-tRNA synthetase [Shigella boydii 3594-74]
gi|391276188|gb|EIQ34964.1| alanyl-tRNA synthetase [Shigella boydii 4444-74]
gi|404337502|gb|EJZ63955.1| alanyl-tRNA synthetase [Shigella flexneri 1485-80]
Length = 876
Score = 574 bits (1480), Expect = e-161, Method: Compositional matrix adjust.
Identities = 315/689 (45%), Positives = 436/689 (63%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +I+ +++ + D +N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRTLIQAVAKVTGAT-----DLSNKSLRVIADHIRSCAFLIADGVMP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K F + I++ D+K ++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAKE--------TFFYKLVGPLIDVMGSAGEDLKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGFGADYNAM-IRVDSA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD L V +L V+GK V ++ G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+ N AV + + +++G H G + G L+VG V+A VD R R +++H+ATH
Sbjct: 513 KDANFSFAVEDTQKYGQAIG----HIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G SQ GSLV LRFDF+ + + E+ +E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M L+ AK GA+A+FGEKY E+V++ S
Sbjct: 629 NIMDLEAAKAKGAMALFGEKYDERVRVLS 657
>gi|258623515|ref|ZP_05718516.1| alanyl-tRNA synthetase [Vibrio mimicus VM573]
gi|424809525|ref|ZP_18234902.1| alanyl-tRNA synthetase [Vibrio mimicus SX-4]
gi|258584177|gb|EEW08925.1| alanyl-tRNA synthetase [Vibrio mimicus VM573]
gi|342323013|gb|EGU18799.1| alanyl-tRNA synthetase [Vibrio mimicus SX-4]
Length = 860
Score = 574 bits (1480), Expect = e-161, Method: Compositional matrix adjust.
Identities = 315/687 (45%), Positives = 434/687 (63%), Gaps = 51/687 (7%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S D +R+ FL F+ S+GH+++ S+SLVP DPT+L T AGM QFK FLG R RA
Sbjct: 4 STDEVRRAFLSFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDCFLGLEKRAYTRAT 63
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
T+QRC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AIQ+AWEF T LP
Sbjct: 64 TAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIQYAWEFLTGVLQLPK 123
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG--------ADDNFWNSGATGPCGPCSE 215
RL ++VYE DDEAF+IWNK+VG+P + I R+G DNFW G TGPCGPC+E
Sbjct: 124 ERLLVTVYETDDEAFDIWNKKVGIPADRIIRIGDKKGGKKFDSDNFWQMGDTGPCGPCTE 183
Query: 216 IYYDFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLER 272
I+YD H D G D RFIE +N VFMQ+N+ DG++EPL + ++DTG+G+ER
Sbjct: 184 IFYD-HGDHIWGGPPGSPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPSVDTGMGIER 242
Query: 273 IARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDG 332
I+ I+Q V +NYE D+ +IK A++ + Y D TN +L+++ DH+R+ +L+ DG
Sbjct: 243 ISAIMQGVHSNYEIDVFQTLIKAAADA--IGY---QDLTNQSLRVVADHIRSCAFLIVDG 297
Query: 333 VFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVK 392
V PSN GRGYV+RR+IRRAVR G LG +G L G + +EL
Sbjct: 298 VMPSNEGRGYVLRRIIRRAVRHGNKLGAQGAFFHKLVGPLAEVMGTAGVELK-------- 349
Query: 393 AREQRILEELKR-EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDT 451
++Q ++E++ R EE F +TL+RG +L++ L D L SG V L G+ F LYDT
Sbjct: 350 -KQQALVEKVLRIEEENFGRTLDRGMSILNEAL-DQL-----SGQV--LDGETVFKLYDT 400
Query: 452 FGFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTE 511
+GFP ++T +VA E G S+D GF+ ME QR Q A A + D ++ L + +TE
Sbjct: 401 YGFPADLTNDVARERGFSIDETGFEQAMEEQR---QRAREAGQFGTDYNS-LIKSATNTE 456
Query: 512 FLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQG 571
F GY +++V + V G V +S G ++L+ TPFYAESGGQ GD G L G
Sbjct: 457 FCGYTASRGQSVVREIFVEGAEVSALSAGDKAIIVLDNTPFYAESGGQCGDTGVLKTEAG 516
Query: 572 TNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLL 631
V V+D K LG+ H G + +GVL G +V+AIVD + R ++H+ATHLL
Sbjct: 517 ------VFHVEDTHK-LGNAIAHHGVLAQGVLAKGDQVDAIVDEQRRAAISLNHSATHLL 569
Query: 632 QAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKV 691
AAL+KV+G+ +Q GSLV + LRFDF+ + E++E+ERL+N I + ++T +
Sbjct: 570 HAALRKVLGEHVAQKGSLVRAETLRFDFSHLEAMTAAEIKEVERLVNQEIRRNHSIETNI 629
Query: 692 MALDDAKRAGAIAMFGEKYGEQVKISS 718
M +D+AK GA+A+FGEKY +QV++ S
Sbjct: 630 MNIDEAKAKGAMALFGEKYDDQVRVLS 656
>gi|427413951|ref|ZP_18904142.1| alanine-tRNA ligase [Veillonella ratti ACS-216-V-Col6b]
gi|425714992|gb|EKU77991.1| alanine-tRNA ligase [Veillonella ratti ACS-216-V-Col6b]
Length = 869
Score = 574 bits (1480), Expect = e-161, Method: Compositional matrix adjust.
Identities = 318/678 (46%), Positives = 432/678 (63%), Gaps = 40/678 (5%)
Query: 50 GDSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
G+ +R+ +L F+ S+ H +L S SL+PE DP++LL AGM KP F GK+ R T
Sbjct: 3 GNELRQAYLKFFESKQHLILDSFSLIPENDPSLLLIGAGMAPLKPFFTGKLVPPRTRVTT 62
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
Q+CIRT D+ENVGRT+RHHTFFEMLGNFSFGDYFKK+AI WAWEF T L NRL++
Sbjct: 63 CQKCIRTGDIENVGRTARHHTFFEMLGNFSFGDYFKKDAIHWAWEFLTEVIKLDKNRLYV 122
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
+VY DD EA++IW+KEVG+P +HI R+ +DNFW G GPCGP SEI+YD RGC +
Sbjct: 123 TVYPDDQEAYDIWHKEVGMPEDHITRL--EDNFWEIGE-GPCGPDSEIFYDLGESRGCGE 179
Query: 229 VDLG---DDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYE 285
D D R++E +NLVF Q+N+ DG PL++KNIDTG GLER+A +LQ +N+E
Sbjct: 180 PDCAPGCDCDRYLEIWNLVFTQFNRTADGEYVPLEKKNIDTGAGLERLASVLQNKESNFE 239
Query: 286 TDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVR 345
TDLIFPII+KA+E+A V+Y ++ T+++LK+IGDH RAI L+SDGV PSN GRGYV+R
Sbjct: 240 TDLIFPIIEKAAEMAKVTY-HTDANTDVSLKVIGDHARAITVLISDGVLPSNEGRGYVLR 298
Query: 346 RLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKRE 405
R++RRAVR GRLLGI EG FL + + I++ + + I + E
Sbjct: 299 RILRRAVRHGRLLGI--------EGRFLTDLVDVVIDILGSGVPGLIEKHDFIKRVVANE 350
Query: 406 ELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEE 465
E RF QTL +G +L ++ + + ++ VP G + F LYDT+GFP E+T+E+A E
Sbjct: 351 EDRFNQTLAQGLDMLGALINEL--KEADATDVP---GAEVFKLYDTYGFPWELTEEIAGE 405
Query: 466 HGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTLS--AKAI 523
G+++DM GF+ M QR +++AA V V PD FL + LS A
Sbjct: 406 AGLTIDMAGFESAMAEQRARARAAREDVDAKV--------ATPDITFLRDEKLSDDESAT 457
Query: 524 VESLLVNGKPVIKVSKGSD---VEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVE 580
+L+ G+ ++ SD V +++ TPF+AE GGQ+GD GF+ G +E
Sbjct: 458 SSEILMLGEGATRLDNASDGMEVTLIVRTTPFHAEGGGQLGDTGFIVGPMGK------ME 511
Query: 581 VKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIG 640
V KK H GTI EG L+VG V+ VD R +HTATHLL AALK+V+G
Sbjct: 512 VHTTKKLPEGTTYHVGTIVEGNLQVGDTVQFEVDTTRRLAMARNHTATHLLHAALKQVLG 571
Query: 641 QETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRA 700
+QAGSLV DRLRFDF P+ EL++I L+NG I A L + M++D+AK+
Sbjct: 572 NHVNQAGSLVMPDRLRFDFTHFSPVTAEELKQITDLVNGEILKAVSLNIQEMSMDEAKKL 631
Query: 701 GAIAMFGEKYGEQVKISS 718
GA+A+FGEKYG++V++ +
Sbjct: 632 GAMALFGEKYGDRVRVVT 649
>gi|416598023|ref|ZP_11782410.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 366867]
gi|322677738|gb|EFY73801.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 366867]
Length = 876
Score = 574 bits (1479), Expect = e-161, Method: Compositional matrix adjust.
Identities = 314/689 (45%), Positives = 438/689 (63%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWFALPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +I+ +++ + D N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRTLIEAVAKVTGAT-----DLGNKSLRVIADHIRSCAFLVADGVLP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K F + IE+ ++K ++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAKE--------TFFYKLVGPLIEVMGSAGEELKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLQGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGFGADYNAM-IRVDSA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD L V +L V+GK V ++ G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDHLELNGKVTALFVDGKAVEAINAGQEAVVVLDQTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G AV + + +++G H G + G L+VG V+A VD R R +++H+ATH
Sbjct: 513 KGAGFTFAVDDTQKYGQAIG----HLGKLSAGALKVGDAVQADVDEARRARIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G +Q GSLV+ LRF+F+ + + +E+ ++E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVAQKGSLVSDKVLRFNFSHNEAMKPSEIRQVEDLVNAQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M LD AK GA+A+FGEKY E+V++ S
Sbjct: 629 NIMDLDAAKAKGAMALFGEKYDERVRVLS 657
>gi|417360242|ref|ZP_12134400.1| Alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Give str. S5-487]
gi|353587127|gb|EHC46521.1| Alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Give str. S5-487]
Length = 885
Score = 574 bits (1479), Expect = e-161, Method: Compositional matrix adjust.
Identities = 314/689 (45%), Positives = 434/689 (62%), Gaps = 53/689 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWFALPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +I+ +++ + D N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRTLIEAVAKVTGAT-----DLGNKSLRVIADHIRSCAFLVADGVLP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K F + IE+ ++K ++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAKE--------TFFYKLVGPLIEVMGSAGEELKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLQGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQ------SQAAHNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+ + A A D +A +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRREASGFGADCAREASGFGADYNA-MIRVDSA 464
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD L V +L V+GK V ++ G + V+L++TPFYAESGGQ+GD G L
Sbjct: 465 SEFKGYDHLELNGKVTALFVDGKAVEAINAGQEAVVVLDQTPFYAESGGQVGDKGEL--- 521
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G AV + + +++G H G + G L+VG V+A VD R R +++H+ATH
Sbjct: 522 KGAGFTFAVDDTQKYGQAIG----HLGKLSAGALKVGDAVQADVDEARRARIRLNHSATH 577
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G +Q GSLV+ LRFDF+ + + +E+ ++E L+N I ++T
Sbjct: 578 LMHAALRQVLGTHVAQKGSLVSDKVLRFDFSHNEAMKPSEIRQVEDLVNAQIRRNLPIET 637
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M LD AK GA+A+FGEKY E+V++ S
Sbjct: 638 NIMDLDAAKAKGAMALFGEKYDERVRVLS 666
>gi|91792571|ref|YP_562222.1| alanyl-tRNA synthetase [Shewanella denitrificans OS217]
gi|122968878|sp|Q12PX7.1|SYA_SHEDO RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|91714573|gb|ABE54499.1| alanyl-tRNA synthetase [Shewanella denitrificans OS217]
Length = 874
Score = 574 bits (1479), Expect = e-161, Method: Compositional matrix adjust.
Identities = 319/683 (46%), Positives = 434/683 (63%), Gaps = 56/683 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
+R FL ++ ++GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA +SQR
Sbjct: 8 LRSAFLAYFETQGHQVVDSSSLVPHNDPTLLFTNAGMNQFKDVFLGMDKRSYSRAVSSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
C+R ND++NVG T+RHHTFFEMLGNFSFGDYFK+EAI++AW F T LP RL
Sbjct: 68 CVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKEEAIRFAWTFLTETLKLPTERLC 127
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYYDF 220
+++YE DDEAFE+WNK++GV E+I R+G A DNFW G TGPCGPCSEI+YD
Sbjct: 128 VTIYETDDEAFELWNKKIGVAAENIIRIGDNKGAPYASDNFWQMGDTGPCGPCSEIFYD- 186
Query: 221 HPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARIL 277
H D G D RFIE +N+VFMQYN++ DG++ PL + ++DTG+G+ERIA I+
Sbjct: 187 HGDHIWGGRPGTPEEDGDRFIEIWNIVFMQYNRQADGAMLPLPKPSVDTGMGIERIAAIM 246
Query: 278 QKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSN 337
Q V +NYE D+ +I K +E+ VS D N +L++I DH+R+ +L++DGV PSN
Sbjct: 247 QGVHSNYEIDIFKQLIAKTAEIIGVS-----DLENKSLRVIADHIRSCAFLIADGVMPSN 301
Query: 338 IGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQR 397
GRGYV+RR+IRRAVR G LG L + + + A L Q
Sbjct: 302 EGRGYVLRRIIRRAVRHGNKLGATDTFFYKLVPTLISVMGDAAKGL---------VETQV 352
Query: 398 ILEE-LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPV 456
I+E+ LK EE +F +TLERG LLD L + SG V L G AF LYDT+GFPV
Sbjct: 353 IVEKALKAEEEQFARTLERGLGLLDNALNEL------SGKV--LDGDTAFKLYDTYGFPV 404
Query: 457 EITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKI---PDTEFL 513
++T +V E ++VD GF+ M QR ++QAA N AD +++ +T+F
Sbjct: 405 DLTADVCRERDITVDEAGFEAAMAEQRSRAQAAGNF-------GADYNKQLIIDEETQFC 457
Query: 514 GYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTN 573
GY LS +A V +L ++G+ V +V++G D V+LN TPFYAESGGQ+GD G L QG N
Sbjct: 458 GYKGLSGEANVVALYLDGQAVNEVTQGQDAVVVLNNTPFYAESGGQVGDKGVLS-AQGIN 516
Query: 574 QQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQA 633
V D +K G H+G + EG ++VG ++ A V+ LRQR +++H+ THLL A
Sbjct: 517 -----FSVTDTQK-FGQATGHQGKVLEGSIKVGTKLAAEVNKDLRQRTELNHSVTHLLHA 570
Query: 634 ALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMA 693
AL++VIG +Q GSLV +RLRFDF + EL+++E L+N I + L T MA
Sbjct: 571 ALRQVIGTHVTQKGSLVNPERLRFDFAHFEGVKAAELKQVEELVNAQIRCNHELNTAEMA 630
Query: 694 LDDAKRAGAIAMFGEKYGEQVKI 716
+D+AK GA+A+FGEKY E+V++
Sbjct: 631 IDEAKEKGAMALFGEKYDEKVRV 653
>gi|190149963|ref|YP_001968488.1| alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 7
str. AP76]
gi|307263291|ref|ZP_07544909.1| Alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 13
str. N273]
gi|205829969|sp|B3H177.1|SYA_ACTP7 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|189915094|gb|ACE61346.1| alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 7
str. AP76]
gi|306871353|gb|EFN03079.1| Alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 13
str. N273]
Length = 874
Score = 574 bits (1479), Expect = e-161, Method: Compositional matrix adjust.
Identities = 306/681 (44%), Positives = 434/681 (63%), Gaps = 50/681 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH V+PS+SLVPE DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 7 IRQSFLDFFHSKGHTVVPSSSLVPENDPTLLFTNAGMNQFKDVFLGLEKRPYTRATTAQR 66
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEM+GNFSFGDYFK +AIQ+ WE+ T GLP +
Sbjct: 67 CVRAGGKHNDLENVGYTARHHTFFEMMGNFSFGDYFKHDAIQFGWEYLTSPQWLGLPKEK 126
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
L+++VYE DDEA++IWNK VGVP +HI R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 127 LYVTVYETDDEAYDIWNKIVGVPTDHIIRIGDNKGAPYASDNFWAMGDTGPCGPCTEIFY 186
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H + G D R+IE +N+VFMQ+N+ DG++E L + ++DTG+GLER+
Sbjct: 187 D-HGETFWGGLPGSPEEDGDRYIEVWNIVFMQFNRLADGTMEKLPKPSVDTGMGLERMTA 245
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
++Q V +NYETD+ +IK+ + L NV+ D N +L+++ DH+RA YL++DGV P
Sbjct: 246 VMQHVNSNYETDIFQTLIKEVAGLLNVT-----DLDNKSLRVVADHIRACSYLIADGVVP 300
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN GRGYV+RR+IRRAVR G LLG K AF + + H + ++
Sbjct: 301 SNEGRGYVLRRIIRRAVRHGNLLGAKE--------AFFYKLVPTLATVMGHAGEVLTQKQ 352
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
I + LK EE +F +TLERG LL+ DAL++ + LSG+ AF LYDT+GFP
Sbjct: 353 AHIQKTLKAEEEQFARTLERGLALLE----DALTKVENN----TLSGEVAFKLYDTYGFP 404
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGY 515
+++T +V E +++D GF+ EM QR +++A+ N D ++ + T+F+GY
Sbjct: 405 LDLTADVCREREITIDEAGFEAEMTAQRERAKASSNFGA----DYNNVIKVEGQTDFIGY 460
Query: 516 DTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
D L+A+A + L NGK V + G ++L++TPFYAE GGQ+GD G + + +
Sbjct: 461 DNLAAQATIVGLFSNGKAVDTIQSGESAVIILDQTPFYAEMGGQVGDSGLI------STE 514
Query: 576 TAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAAL 635
V D +K G VF H G + G L +G +V A VD R +H+ATHLL +AL
Sbjct: 515 ICNFAVNDTQK-YGQVFGHIGQLTSGSLSIGDKVTATVDATRRVAITANHSATHLLHSAL 573
Query: 636 KKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALD 695
++V+G +Q GSLV+ + LRFDF+ + ++LEEIER++N I + + + M ++
Sbjct: 574 REVLGDHVAQKGSLVSENILRFDFSQPEAISKSQLEEIERIVNRKIRENIQVTIETMDIE 633
Query: 696 DAKRAGAIAMFGEKYGEQVKI 716
AK+ GA+A+FGEKYG+ V++
Sbjct: 634 SAKKKGAMALFGEKYGDVVRV 654
>gi|417392906|ref|ZP_12155581.1| Alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Minnesota str. A4-603]
gi|353610369|gb|EHC63367.1| Alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Minnesota str. A4-603]
Length = 713
Score = 574 bits (1479), Expect = e-161, Method: Compositional matrix adjust.
Identities = 315/689 (45%), Positives = 438/689 (63%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWFALPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +I+ +++ + D N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRTLIEAVAKVTGAT-----DLGNKSLRVIADHIRSCAFLVADGVLP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K F + IE+ ++K ++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAKE--------TFFYKLVGPLIEVMGSAGEELKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLQGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGFGADYNAM-IRVDSA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD L V +L V+GK V ++ G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDHLELNGKVTALFVDGKAVEAINAGQEAVVVLDQTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G AV + + +++G H G + G L+VG V+A VD R R +++H+ATH
Sbjct: 513 KGAGFTFAVDDTQKYGQAIG----HIGKLSAGALKVGDAVQADVDEARRARIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G +Q GSLV+ LRFDF+ + + +E+ ++E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVAQKGSLVSDKVLRFDFSHNEAMKPSEIRQVEDLVNAQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M LD AK GA+A+FGEKY E+V++ S
Sbjct: 629 NIMDLDAAKAKGAMALFGEKYDERVRVLS 657
>gi|168230882|ref|ZP_02655940.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Kentucky str. CDC 191]
gi|194471872|ref|ZP_03077856.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Kentucky str. CVM29188]
gi|194458236|gb|EDX47075.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Kentucky str. CVM29188]
gi|205334599|gb|EDZ21363.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Kentucky str. CDC 191]
Length = 876
Score = 573 bits (1478), Expect = e-161, Method: Compositional matrix adjust.
Identities = 314/689 (45%), Positives = 438/689 (63%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWFALPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +I+ +++ + D N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRTLIEAVAKVTGAT-----DLGNKSLRVIADHIRSCAFLVADGVLP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K F + IE+ ++K ++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAKE--------TFFYKLVGPLIEVMGSAGEELKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLQGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGFGADYNAM-IRVDSA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD L V +L V+GK V ++ G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDHLELNGKVTALFVDGKAVEAINAGQEAVVVLDQTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G AV + + +++G H G + G L+VG V+A VD R R +++H+ATH
Sbjct: 513 KGAGFTFAVDDTQKYGQAIG----HLGKLSAGALKVGDAVQADVDEARRARIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G +Q GSLV+ LRFDF+ + + +E+ ++E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVAQKGSLVSDKVLRFDFSHNEAMKPSEIRQVEDLVNAQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M L+ AK GA+A+FGEKY E+V++ S
Sbjct: 629 NIMDLEAAKAKGAMALFGEKYDERVRVLS 657
>gi|117919577|ref|YP_868769.1| alanyl-tRNA synthetase [Shewanella sp. ANA-3]
gi|205830207|sp|A0KU94.1|SYA_SHESA RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|117611909|gb|ABK47363.1| alanyl-tRNA synthetase [Shewanella sp. ANA-3]
Length = 874
Score = 573 bits (1478), Expect = e-161, Method: Compositional matrix adjust.
Identities = 318/683 (46%), Positives = 431/683 (63%), Gaps = 54/683 (7%)
Query: 52 SIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQ 110
++R FL+F+ S GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA T+Q
Sbjct: 7 ALRSAFLEFFRSNGHQVVDSSSLVPGNDPTLLFTNAGMNQFKDVFLGMDKRSYTRATTAQ 66
Query: 111 RCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRL 166
RC+R ND++NVG T+RHHTFFEMLGNFSFGDYFK++AI++ W F T LP RL
Sbjct: 67 RCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKEDAIRFGWTFLTEVLKLPKERL 126
Query: 167 WISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYYD 219
++VY+ DDEAFEIWNK++GV E+I R+G A DNFW G TGPCGPC+EI+YD
Sbjct: 127 CVTVYQTDDEAFEIWNKKIGVAAENIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFYD 186
Query: 220 FHPD-----RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIA 274
H D R S + GD RFIE +N+VFMQYN++ G + PL + ++DTG+G+ERIA
Sbjct: 187 -HGDHIWGGRPGSPEEDGD--RFIEIWNIVFMQYNRQASGEMLPLPKPSVDTGMGIERIA 243
Query: 275 RILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVF 334
I+Q V +NYE D+ +I KA+E+ V+ D +N +L++I DH+R+ +L++DGV
Sbjct: 244 AIMQGVHSNYEIDIFRALIAKAAEIIGVT-----DLSNKSLRVIADHIRSCAFLVADGVM 298
Query: 335 PSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAR 394
PSN GRGYV+RR+IRRAVR G LG AF + IE+ +
Sbjct: 299 PSNEGRGYVLRRIIRRAVRHGNKLGATE--------AFFYKLVPTLIEVMGDAAKGLADT 350
Query: 395 EQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGF 454
+ + + LK EE +F +TLERG +LD L + T L G+ F LYDT+GF
Sbjct: 351 QVIVEKALKAEEEQFARTLERGLGILDSALNELQGDT--------LDGETVFKLYDTYGF 402
Query: 455 PVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKI-PDTEFL 513
PV++T +V E + VD GF++ M QR ++QAA N D +A L KI +T F
Sbjct: 403 PVDLTADVCRERNIIVDEAGFEVAMAEQRSRAQAAGN---FGADYNAAL--KIDAETAFC 457
Query: 514 GYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTN 573
GY L+ A V +L +NG+ V +S G D V+L+ TPFYAESGGQ+GD G L V QG
Sbjct: 458 GYSELTGNAKVTALYLNGESVSAISAGDDAVVVLDVTPFYAESGGQVGDKGVL-VAQGIE 516
Query: 574 QQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQA 633
V D +K G HKGT+ G L VG+ +EA VD KLR R +++H+ THLL A
Sbjct: 517 -----FAVSDTQK-FGQASGHKGTLTAGSLSVGQVLEAKVDKKLRHRTQLNHSVTHLLHA 570
Query: 634 ALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMA 693
AL++V+G +Q GSLV +RLRFDF+ + EL+++E L+N I + L+ MA
Sbjct: 571 ALRQVLGTHVTQKGSLVDPERLRFDFSHFEAVKPAELKQVEELVNTQIRRNHELKVAEMA 630
Query: 694 LDDAKRAGAIAMFGEKYGEQVKI 716
+D+AK GA+A+FGEKY QV++
Sbjct: 631 IDEAKEKGAMALFGEKYDAQVRV 653
>gi|421886006|ref|ZP_16317187.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Senftenberg str. SS209]
gi|379984321|emb|CCF89460.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Senftenberg str. SS209]
Length = 876
Score = 573 bits (1478), Expect = e-161, Method: Compositional matrix adjust.
Identities = 314/689 (45%), Positives = 438/689 (63%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWFALPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +I+ +++ + D N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRTLIEAVAKVTGAT-----DLGNKSLRVIADHIRSCAFLVADGVLP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K F + IE+ ++K ++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAKE--------TFFYKLVGPLIEVMGSAGEELKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLQGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGFGADYNAM-IRVDSA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD L V +L V+GK V ++ G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDHLELNGKVTALFVDGKAVEAINAGQEAVVVLDQTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G AV + + +++G H G + G L+VG V+A VD R R +++H+ATH
Sbjct: 513 KGAGFTFAVDDTQKYGQAIG----HIGKLSAGALKVGDAVQADVDEARRARIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G +Q GSLV+ LRFDF+ + + +E+ ++E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVAQKGSLVSDKVLRFDFSHNEAMKPSEIRQVEDLVNAQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M L+ AK GA+A+FGEKY E+V++ S
Sbjct: 629 NIMDLEAAKAKGAMALFGEKYDERVRVLS 657
>gi|229512814|ref|ZP_04402281.1| alanyl-tRNA synthetase [Vibrio cholerae TMA 21]
gi|229350063|gb|EEO15016.1| alanyl-tRNA synthetase [Vibrio cholerae TMA 21]
Length = 860
Score = 573 bits (1478), Expect = e-161, Method: Compositional matrix adjust.
Identities = 314/687 (45%), Positives = 434/687 (63%), Gaps = 51/687 (7%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S D +R+ FL F+ S+GH+++ S+SLVP DPT+L T AGM QFK FLG R RA
Sbjct: 4 STDEVRRAFLSFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDCFLGLEKRAYTRAT 63
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
T+QRC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AIQ+AWEF T LP
Sbjct: 64 TAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIQYAWEFLTDVLQLPK 123
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG--------ADDNFWNSGATGPCGPCSE 215
RL ++VYE DDEAF+IWNK+VG+P + I R+G DNFW G TGPCGPC+E
Sbjct: 124 ERLLVTVYETDDEAFDIWNKKVGIPADRIIRIGDKKGGKKFDSDNFWQMGDTGPCGPCTE 183
Query: 216 IYYDFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLER 272
I+YD H D G D RFIE +N VFMQ+N+ DG++EPL + ++DTG+G+ER
Sbjct: 184 IFYD-HGDHIWGGPPGSPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPSVDTGMGIER 242
Query: 273 IARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDG 332
I+ I+Q V +NYE D+ +IK A++ + Y D TN +L+++ DH+R+ +L+ DG
Sbjct: 243 ISAIMQGVHSNYEIDVFQTLIKAAADA--IGY---QDLTNQSLRVVADHIRSCAFLIVDG 297
Query: 333 VFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVK 392
V PSN GRGYV+RR+IRRAVR G LG +G L G + +EL
Sbjct: 298 VMPSNEGRGYVLRRIIRRAVRHGNKLGAQGAFFHKLVGPLAEVMGTAGVELK-------- 349
Query: 393 AREQRILEELKR-EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDT 451
++Q ++E++ R EE F +TL+RG +L+ DAL + SG V L G+ F LYDT
Sbjct: 350 -KQQALVEKVLRIEEENFGRTLDRGMSILN----DALDQL--SGQV--LDGETVFKLYDT 400
Query: 452 FGFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTE 511
+GFP ++T +VA E G S+D GF+ ME QR Q A A + D ++ L + +TE
Sbjct: 401 YGFPADLTNDVARERGFSIDEAGFEQAMEEQR---QRAREAGQFGTDYNS-LIKSATNTE 456
Query: 512 FLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQG 571
F GY +++V + V G V +S G ++L+ TPFYAESGGQ GD G L G
Sbjct: 457 FCGYTASRGQSVVREMFVEGSEVSTLSAGDKAIIVLDNTPFYAESGGQCGDTGVLKTDAG 516
Query: 572 TNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLL 631
+ V+D +K LG+ H G + +GVL +V+AIVD K R ++H+ATHLL
Sbjct: 517 ------IFHVEDTQK-LGNAIAHHGVLAQGVLATDDQVDAIVDEKRRAAISLNHSATHLL 569
Query: 632 QAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKV 691
AAL+KV+G+ +Q GSLV + LRFDF+ + E++E+ERL+N I + ++T +
Sbjct: 570 HAALRKVLGEHVAQKGSLVRAETLRFDFSHLEAMTPAEIKEVERLVNQEIRHNHNIETNI 629
Query: 692 MALDDAKRAGAIAMFGEKYGEQVKISS 718
M +D+AK GA+A+FGEKY +QV++ S
Sbjct: 630 MNIDEAKAKGAMALFGEKYDDQVRVLS 656
>gi|422909067|ref|ZP_16943719.1| alanyl-tRNA synthetase [Vibrio cholerae HE-09]
gi|341636149|gb|EGS60852.1| alanyl-tRNA synthetase [Vibrio cholerae HE-09]
Length = 860
Score = 573 bits (1478), Expect = e-161, Method: Compositional matrix adjust.
Identities = 313/687 (45%), Positives = 434/687 (63%), Gaps = 51/687 (7%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S D +R+ FL F+ S+GH+++ S+SLVP DPT+L T AGM QFK FLG R RA
Sbjct: 4 STDEVRRAFLSFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDCFLGLEKRAYTRAT 63
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
T+QRC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AIQ+AWEF T LP
Sbjct: 64 TAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIQYAWEFLTDVLQLPK 123
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG--------ADDNFWNSGATGPCGPCSE 215
RL ++VYE DDEAF+IWNK++G+P + I R+G DNFW G TGPCGPC+E
Sbjct: 124 ERLLVTVYETDDEAFDIWNKKIGIPADRIIRIGDKKGGKKFDSDNFWQMGDTGPCGPCTE 183
Query: 216 IYYDFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLER 272
I+YD H D G D RFIE +N VFMQ+N+ DG++EPL + ++DTG+G+ER
Sbjct: 184 IFYD-HGDHIWGGPPGSPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPSVDTGMGIER 242
Query: 273 IARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDG 332
I+ I+Q V +NYE D+ +IK A++ + Y D N +L+++ DH+R+ +L+ DG
Sbjct: 243 ISAIMQGVHSNYEIDVFQTLIKAAADA--IGY---QDLNNQSLRVVADHIRSCAFLIVDG 297
Query: 333 VFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVK 392
V PSN GRGYV+RR+IRRAVR G LG +G L G + +EL
Sbjct: 298 VMPSNEGRGYVLRRIIRRAVRHGNKLGAQGAFFHKLVGPLAEVMGTAGVELK-------- 349
Query: 393 AREQRILEELKR-EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDT 451
++Q ++E++ R EE F +TL+RG +L+ DAL + SG V L G+ F LYDT
Sbjct: 350 -KQQALVEKVLRIEEENFGRTLDRGMSILN----DALDQL--SGQV--LDGETVFKLYDT 400
Query: 452 FGFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTE 511
+GFP ++T +VA E G S+D GF+ ME QR Q A A + D ++ L + +TE
Sbjct: 401 YGFPADLTNDVARERGFSIDEAGFEQAMEEQR---QRAREAGQFGTDYNS-LIKSATNTE 456
Query: 512 FLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQG 571
F GY +++V + V G V +S G ++L+ TPFYAESGGQ GD G L G
Sbjct: 457 FCGYTASRGQSVVREMFVEGAEVSALSAGDKAIIVLDNTPFYAESGGQCGDTGVLKTDAG 516
Query: 572 TNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLL 631
+ V+D +K LG+ H G + +GVL G +V+AIVD K R ++H+ATHLL
Sbjct: 517 ------IFHVEDTQK-LGNAIAHHGVLAQGVLATGDQVDAIVDEKRRAAISLNHSATHLL 569
Query: 632 QAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKV 691
AAL+KV+G+ +Q GSLV + LRFDF+ + E++E+ERL+N I + ++T +
Sbjct: 570 HAALRKVLGEHVAQKGSLVRAETLRFDFSHLEAMTPAEIKEVERLVNQEIRHNHDIETNI 629
Query: 692 MALDDAKRAGAIAMFGEKYGEQVKISS 718
M +D+AK GA+A+FGEKY +QV++ S
Sbjct: 630 MNIDEAKAKGAMALFGEKYDDQVRVLS 656
>gi|52424403|ref|YP_087540.1| alanyl-tRNA synthetase [Mannheimia succiniciproducens MBEL55E]
gi|59798509|sp|Q65VQ5.1|SYA_MANSM RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|52306455|gb|AAU36955.1| AlaS protein [Mannheimia succiniciproducens MBEL55E]
Length = 875
Score = 573 bits (1478), Expect = e-161, Method: Compositional matrix adjust.
Identities = 316/681 (46%), Positives = 432/681 (63%), Gaps = 49/681 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ +LDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 7 IRQSYLDFFHSKGHQVVESSSLVPHNDPTLLFTNAGMNQFKDVFLGMDKRPYTRATTAQR 66
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AI + WEF T GLP +
Sbjct: 67 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIAYGWEFLTSPQWLGLPKEK 126
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
L+++VYE DDEA++IWNKEVGVP +HI R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 127 LYVTVYETDDEAYDIWNKEVGVPADHIIRIGDNKGAPYASDNFWAMGDTGPCGPCTEIFY 186
Query: 219 DF--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARI 276
D H G D R+IE +N+VFMQ+N+ DG++E L + ++DTG+GLERIA +
Sbjct: 187 DHGEHIWGGLPGTPEEDGDRYIEIWNIVFMQFNRHADGTMEKLPKPSVDTGMGLERIAAV 246
Query: 277 LQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPS 336
LQ V +NY+ D+ +IKK ++L D TN +L++I DH+R+ YL++DGV PS
Sbjct: 247 LQHVNSNYDIDIFQTLIKKVAQLTG-----EKDLTNKSLRVIADHIRSCAYLIADGVMPS 301
Query: 337 NIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQ 396
N GRGYV+RR+IRRAVR G LLG K F + ++ H V +
Sbjct: 302 NEGRGYVLRRIIRRAVRHGHLLGAKE--------TFFYKLVPTLADVMEHAGEIVNQKRA 353
Query: 397 RILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPV 456
I + LK EE +F +TLERG LLD DALS+ +++ LSG AF LYDT+GFP+
Sbjct: 354 LIEKTLKAEEEQFARTLERGLLLLD----DALSQVKDN----VLSGDVAFKLYDTYGFPL 405
Query: 457 EITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYD 516
++T +V E +++D KGF+ EM+ QR ++QA+ N VD + ++ + TEF GY+
Sbjct: 406 DLTADVCRERNITIDEKGFEREMQAQRARAQASSN---FGVDYN-NVIKVDGQTEFKGYE 461
Query: 517 TLS-AKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
T S + A V +L +GK V +V G + V+L+RTPFY ESGGQIGD G++
Sbjct: 462 TTSLSSAKVVALFTDGKSVERVQSGENAVVILDRTPFYGESGGQIGDTGYIAT------D 515
Query: 576 TAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAAL 635
A + D +K G V H G + G L VG V A VD + R +H+ATHLL AAL
Sbjct: 516 LAAFRINDTQK-YGQVTGHIGQLESGSLSVGDTVSAQVDTERRLAVAANHSATHLLHAAL 574
Query: 636 KKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALD 695
+KV+G +Q GSLV+ LRFDF + ++ EIE ++N I + + T+VM ++
Sbjct: 575 RKVLGDHVAQKGSLVSESALRFDFIQPEAISKEQIIEIEAIVNRQIRENISVTTEVMDIE 634
Query: 696 DAKRAGAIAMFGEKYGEQVKI 716
AK+ GA+A+FGEKYG+ V++
Sbjct: 635 AAKQKGAMALFGEKYGDLVRV 655
>gi|420326967|ref|ZP_14828714.1| alanyl-tRNA synthetase [Shigella flexneri CCH060]
gi|391249145|gb|EIQ08382.1| alanyl-tRNA synthetase [Shigella flexneri CCH060]
Length = 876
Score = 573 bits (1478), Expect = e-161, Method: Compositional matrix adjust.
Identities = 315/689 (45%), Positives = 436/689 (63%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +I+ +++ + D +N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRTLIQAVAKVTGAT-----DLSNKSLRVIADHIRSCAFLIADGVMP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K F + I++ D+K ++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAKE--------TFFYKLVGPLIDVMGSAGEDLKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGFGADYNAM-IRVDSA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD L V +L V+GK V ++ G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+ N AV + + +++G H G + G L+VG V+A VD R R +++H+ATH
Sbjct: 513 KDANFSFAVEDTQKYGQAIG----HIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G SQ GSLV LRFDF+ + + E+ +E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M L+ AK GA+A+FGEKY E+V++ S
Sbjct: 629 NIMDLEVAKAKGAMALFGEKYDERVRVLS 657
>gi|424658420|ref|ZP_18095677.1| alanyl-tRNA synthetase [Vibrio cholerae HE-16]
gi|408055142|gb|EKG90085.1| alanyl-tRNA synthetase [Vibrio cholerae HE-16]
Length = 860
Score = 573 bits (1477), Expect = e-160, Method: Compositional matrix adjust.
Identities = 312/687 (45%), Positives = 434/687 (63%), Gaps = 51/687 (7%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S D +R+ FL F+ S+GH+++ S+SLVP DPT+L T AGM QFK FLG R RA
Sbjct: 4 STDEVRRAFLSFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDCFLGLEKRAYTRAT 63
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
T+QRC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AIQ+AWEF T LP
Sbjct: 64 TAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIQYAWEFLTDVLQLPK 123
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMGA--------DDNFWNSGATGPCGPCSE 215
RL +++YE DDEAF+IWNK++G+P + I R+G DNFW G TGPCGPC+E
Sbjct: 124 ERLLVTIYETDDEAFDIWNKKIGIPADRIIRIGDKKGGKKFDSDNFWQMGDTGPCGPCTE 183
Query: 216 IYYDFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLER 272
I+YD H D G D RFIE +N VFMQ+N+ DG++EPL + ++DTG+G+ER
Sbjct: 184 IFYD-HGDHIWGGPPGSPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPSVDTGMGIER 242
Query: 273 IARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDG 332
I+ I+Q V +NYE D+ +IK A++ + Y D TN +L+++ DH+R+ +L+ DG
Sbjct: 243 ISAIMQGVHSNYEIDVFQTLIKAAADA--IGY---QDLTNQSLRVVADHIRSCAFLIVDG 297
Query: 333 VFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVK 392
V PSN GRGYV+RR+IRRAVR G LG +G L G + +EL
Sbjct: 298 VMPSNEGRGYVLRRIIRRAVRHGNKLGAQGAFFHKLVGPLAEVMGTAGVELK-------- 349
Query: 393 AREQRILEELKR-EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDT 451
++Q ++E++ R EE F +TL+RG +L+ DAL + SG V L G+ F YDT
Sbjct: 350 -KQQALVEKVLRIEEENFGRTLDRGMSILN----DALDQL--SGQV--LDGETVFKFYDT 400
Query: 452 FGFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTE 511
+GFP ++T +VA E G S+D GF+ ME QR Q A A + D ++ L + +TE
Sbjct: 401 YGFPADLTNDVARERGFSIDESGFEQAMEEQR---QRAREAGQFGTDYNS-LIKSATNTE 456
Query: 512 FLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQG 571
F GY +++V + V G V +S G ++L+ TPFYAESGGQ GD G L G
Sbjct: 457 FCGYTASRGQSVVREMFVEGAEVSALSAGDKAIIVLDNTPFYAESGGQCGDTGVLKTDAG 516
Query: 572 TNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLL 631
+ V+D +K LG+ H G + +GVL G +V+AIVD K R ++H+ATHLL
Sbjct: 517 ------IFHVEDTQK-LGNAIAHHGVLAQGVLATGDQVDAIVDEKRRAAISLNHSATHLL 569
Query: 632 QAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKV 691
AAL+KV+G+ +Q GSLV + LRFDF+ + E++E+ERL+N I + ++T +
Sbjct: 570 HAALRKVLGEHVAQKGSLVRAETLRFDFSHLEAMTPAEIKEVERLVNQEIRHNHDIETNI 629
Query: 692 MALDDAKRAGAIAMFGEKYGEQVKISS 718
M +D+AK GA+A+FGEKY +QV++ S
Sbjct: 630 MNIDEAKAKGAMALFGEKYDDQVRVLS 656
>gi|121535965|ref|ZP_01667759.1| alanyl-tRNA synthetase [Thermosinus carboxydivorans Nor1]
gi|121305457|gb|EAX46405.1| alanyl-tRNA synthetase [Thermosinus carboxydivorans Nor1]
Length = 869
Score = 573 bits (1477), Expect = e-160, Method: Compositional matrix adjust.
Identities = 315/675 (46%), Positives = 439/675 (65%), Gaps = 36/675 (5%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
+G+ +RK+FL F+AS+ H VLPSASL+PE DPT+LL AGM FKP F GK+ PR A
Sbjct: 2 TGNELRKKFLQFFASKDHLVLPSASLIPENDPTLLLIGAGMAPFKPFFTGKMKPPHPRIA 61
Query: 108 TSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
T Q+C+RT D+ENVGRT+RHHTFFEMLGNFSFGDYFK+EAI W+WEF T LP ++LW
Sbjct: 62 TCQKCVRTGDIENVGRTARHHTFFEMLGNFSFGDYFKREAITWSWEFITEHLNLPKDKLW 121
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCS 227
I+++ +DDEAFEIW+KEVGVPV+ I R+ +DNFW G GPCGPCSEI+ D +RGC
Sbjct: 122 ITIHTEDDEAFEIWHKEVGVPVDRIVRL--EDNFWEIGP-GPCGPCSEIHIDLGEERGCG 178
Query: 228 --DVDLGDDT-RFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNY 284
D +G R++E +NLVF QY++ ++G+ PL +KNIDTG GLERIA +LQ +N+
Sbjct: 179 KPDCRVGCSCDRYLEIWNLVFTQYDRDEEGNYTPLAKKNIDTGAGLERIASVLQNKRSNF 238
Query: 285 ETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVV 344
ETDL+FPII+ +++A V+Y +S +T+++LK+I DH R++ +++DGV PSN GRGYV+
Sbjct: 239 ETDLLFPIIEHTAKVAGVTYGESA-KTDVSLKVIADHGRSLTIMIADGVLPSNEGRGYVL 297
Query: 345 RRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKR 404
RR++RRAVR GRLLGI + FL I + + ++ ++ I + ++
Sbjct: 298 RRILRRAVRHGRLLGI--------DKPFLADIVDVVANIFAEPYPEINDKKAYIKKVVQL 349
Query: 405 EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAE 464
EE RF TL +G +LL+ + +ESG L G F LYDTFGFP E+T+E+
Sbjct: 350 EEERFNATLAQGMELLNSH----IRVLKESGKTV-LDGATGFKLYDTFGFPWELTQEILA 404
Query: 465 EHGVSVDMKGFDIEMEN--QRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTLSAKA 522
EH + +D GFD M+ QR ++ N ++ V D + L T+ L YD + A
Sbjct: 405 EHDMELDRAGFDQAMDEQRQRARAARQENEERVVVPDLSGLV-----TQELKYDPQAESA 459
Query: 523 IVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVK 582
V +L +GK V G +V ++L+ TPFYAE GGQ+GD G L GT AVV +
Sbjct: 460 RVVLVLQDGKVVEAAHDGQEVALILDVTPFYAEGGGQVGDSGTLTAQYGT---VAVVTAR 516
Query: 583 DVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQE 642
+ G+++ H G++ EG ++ G V+ VD R+ A +HTATHLL AALKKV+G+
Sbjct: 517 KLPD--GTIY-HVGSVTEGTIKPGDMVKIAVDAARRRDASRNHTATHLLHAALKKVLGEH 573
Query: 643 TSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDD-AKRAG 701
+QAGS V DRLRFDF+ P+ +L E+E ++N I N+ ++ + A+ G
Sbjct: 574 VNQAGSYVGPDRLRFDFSHFAPVTVEQLAEVENMVNEVI-LRNIAVGRIETTQELAREMG 632
Query: 702 AIAMFGEKYGEQVKI 716
A A+FGEKYGE+V +
Sbjct: 633 ATALFGEKYGERVSV 647
>gi|303253696|ref|ZP_07339833.1| alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
str. 4226]
gi|307247624|ref|ZP_07529667.1| Alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
str. S1536]
gi|302647421|gb|EFL77640.1| alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
str. 4226]
gi|306855894|gb|EFM88054.1| Alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
str. S1536]
Length = 874
Score = 573 bits (1477), Expect = e-160, Method: Compositional matrix adjust.
Identities = 307/681 (45%), Positives = 433/681 (63%), Gaps = 50/681 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH V+PS+SLVPE DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 7 IRQSFLDFFHSKGHTVVPSSSLVPENDPTLLFTNAGMNQFKDVFLGLEKRPYTRATTAQR 66
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEM+GNFSFGDYFK +AIQ+ WE+ T GLP +
Sbjct: 67 CVRAGGKHNDLENVGYTARHHTFFEMMGNFSFGDYFKHDAIQFGWEYLTSPQWLGLPKEK 126
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
L+++VYE DDEA++IWNK VGVP +HI R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 127 LYVTVYETDDEAYDIWNKIVGVPTDHIIRIGDNKGAPYASDNFWAMGDTGPCGPCTEIFY 186
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H + G D R+IE +N+VFMQ+N+ DG++E L + ++DTG+GLER+
Sbjct: 187 D-HGETFWGGLPGSPEEDGDRYIEVWNIVFMQFNRLADGTMEKLPKPSVDTGMGLERMTA 245
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
++Q V +NYETD+ +IK+ + L NVS D N +L+++ DH+RA YL++DGV P
Sbjct: 246 VMQHVNSNYETDIFQTLIKEVAGLLNVS-----DLDNKSLRVVADHIRACSYLIADGVVP 300
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN GRGYV+RR+IRRAVR G LLG K AF + + H + ++
Sbjct: 301 SNEGRGYVLRRIIRRAVRHGNLLGAKE--------AFFYKLVPTLATVMGHAGEVLTQKQ 352
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
I + LK EE +F +TLERG LL+ DAL++ + LSG+ AF LYDT+GFP
Sbjct: 353 AHIQKTLKAEEEQFARTLERGLALLE----DALTKVENN----TLSGEVAFKLYDTYGFP 404
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGY 515
+++T +V E +++D GF+ EM QR +++A+ N D ++ + T+F+GY
Sbjct: 405 LDLTADVCRERELTIDEAGFEAEMTAQRERAKASSNFGT----DYNNVIKVEGQTDFIGY 460
Query: 516 DTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
D L A+A + L NGK V + G ++L++TPFYAE GGQ+GD G + + +
Sbjct: 461 DNLEAQATIVGLFSNGKAVDTIQSGESAVIILDQTPFYAEMGGQVGDSGLI------STE 514
Query: 576 TAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAAL 635
V D +K G VF H G + G L +G +V A VD R +H+ATHLL +AL
Sbjct: 515 ICNFAVNDTQK-YGQVFGHIGQLTSGSLSIGDKVTATVDATRRVAITANHSATHLLHSAL 573
Query: 636 KKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALD 695
++V+G +Q GSLV+ + LRFDF+ + ++LEEIER++N I + + + M ++
Sbjct: 574 REVLGDHVAQKGSLVSENILRFDFSQPEAISKSQLEEIERIVNRKIRENIQVTIETMDIE 633
Query: 696 DAKRAGAIAMFGEKYGEQVKI 716
AK+ GA+A+FGEKYG+ V++
Sbjct: 634 SAKKKGAMALFGEKYGDVVRV 654
>gi|56414779|ref|YP_151854.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Paratyphi A str. ATCC 9150]
gi|197363707|ref|YP_002143344.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Paratyphi A str. AKU_12601]
gi|59798481|sp|Q5PF17.1|SYA_SALPA RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|56129036|gb|AAV78542.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Paratyphi A str. ATCC 9150]
gi|197095184|emb|CAR60735.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Paratyphi A str. AKU_12601]
Length = 876
Score = 573 bits (1477), Expect = e-160, Method: Compositional matrix adjust.
Identities = 314/689 (45%), Positives = 437/689 (63%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWFALPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDE +EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYETDDETYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +I+ +++ + D N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRTLIEAVAKVTGAT-----DLGNKSLRVIADHIRSCAFLVADGVLP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K F + IE+ ++K ++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAKE--------TFFYKLVGPLIEVMGSAGEELKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLQGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEVGFEAAMEEQRRRAREASGFGADYNAM-IRVDSA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD L V +L V+GK V ++ G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDHLELNGKVTALFVDGKAVEAINAGQEAVVVLDQTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G AV + + +++G H G + G L+VG V+A VD R R +++H+ATH
Sbjct: 513 KGAGFTFAVDDTQKYGQAIG----HIGKLSAGALKVGDAVQADVDEARRARIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G +Q GSLV+ LRFDF+ + + +E+ ++E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVAQKGSLVSDKVLRFDFSHNEAMKPSEIRQVEDLVNAQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M LD AK GA+A+FGEKY E+V++ S
Sbjct: 629 NIMDLDAAKAKGAMALFGEKYDERVRVLS 657
>gi|254507377|ref|ZP_05119512.1| alanyl-tRNA synthetase [Vibrio parahaemolyticus 16]
gi|219549633|gb|EED26623.1| alanyl-tRNA synthetase [Vibrio parahaemolyticus 16]
Length = 860
Score = 573 bits (1477), Expect = e-160, Method: Compositional matrix adjust.
Identities = 314/686 (45%), Positives = 429/686 (62%), Gaps = 49/686 (7%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S D +R FL F+ S+GH+++ S+SLVP DPT+L T AGM QFK FLG R RA
Sbjct: 4 STDEVRNAFLKFFESKGHQIVDSSSLVPHNDPTLLFTNAGMNQFKDCFLGAEKRAYTRAT 63
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
T+QRC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI +AWEF T LP
Sbjct: 64 TAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIAFAWEFLTETLKLPK 123
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG--------ADDNFWNSGATGPCGPCSE 215
RL ++VYE DDEAF+IWNK+VGVP + I R+G DNFW G TGPCGPC+E
Sbjct: 124 ERLLVTVYETDDEAFDIWNKKVGVPADRIVRIGDKEGGKQFESDNFWTMGDTGPCGPCTE 183
Query: 216 IYYDF--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERI 273
I+YD H G D RFIE +N VFMQ+N+ DG++EPL + +DTG+G+ERI
Sbjct: 184 IFYDHGEHIWGGRPGTPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPAVDTGMGIERI 243
Query: 274 ARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGV 333
+ I+Q V +NYE D+ +IK A+E+ D +N +L++I DH+R+ +L++DGV
Sbjct: 244 SAIMQGVHSNYEIDVFQKLIKAAAEVVGCE-----DLSNQSLRVIADHIRSCSFLIADGV 298
Query: 334 FPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKA 393
PSN GRGYV+RR+IRRAVR G LG KG L G + A EL
Sbjct: 299 MPSNEGRGYVLRRIIRRAVRHGNKLGAKGVFFHKLVGVLAEVMGSAADELK--------- 349
Query: 394 REQRILEELKR-EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTF 452
++Q ++E++ R EE F +TLERG +L++ L DAL L G+ F LYDT+
Sbjct: 350 KQQAVVEKVLRIEEENFGRTLERGMVILNEAL-DALEG-------KELDGETVFKLYDTY 401
Query: 453 GFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEF 512
GFP ++T +VA E ++D GF+ ME QR Q A A + D +A + + +TEF
Sbjct: 402 GFPADLTNDVARERDFTIDEAGFEKAMEEQR---QRAREAGQFGTDYNATIKTE-AETEF 457
Query: 513 LGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGT 572
GY K+ V + V G+ +S G ++L TPFYAESGGQ GD G L G
Sbjct: 458 CGYTGTQGKSNVAEIFVEGEVAESLSAGDKAIIILGETPFYAESGGQCGDAGVLKTESG- 516
Query: 573 NQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQ 632
+ +V+D +K LG+ H G + EGVL G EVEAIVD + R ++H+ATHLL
Sbjct: 517 -----LFKVEDTQK-LGNAIAHHGVLAEGVLAKGDEVEAIVDAERRASISLNHSATHLLH 570
Query: 633 AALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVM 692
AAL++V+G+ +Q GSLV + LRFDF+ + TEL+E+ERL+N + ++++T VM
Sbjct: 571 AALRQVLGEHVTQKGSLVKPENLRFDFSHLEAVTPTELKEVERLVNAQVRRNHVIETNVM 630
Query: 693 ALDDAKRAGAIAMFGEKYGEQVKISS 718
++ AK+ GA+A+FGEKY ++V++ S
Sbjct: 631 DIESAKQKGAMALFGEKYDDEVRVLS 656
>gi|283786756|ref|YP_003366621.1| alanyl-tRNA synthetase [Citrobacter rodentium ICC168]
gi|282950210|emb|CBG89846.1| alanyl-tRNA synthetase [Citrobacter rodentium ICC168]
Length = 875
Score = 573 bits (1477), Expect = e-160, Method: Compositional matrix adjust.
Identities = 318/690 (46%), Positives = 438/690 (63%), Gaps = 64/690 (9%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQYAWELLTGENWFALPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYETDDEAYEIWEKEVGIPRARIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHVWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +I +++ + D +N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRTLIDAVAKVTGAT-----DLSNKSLRVIADHIRSCAFLVADGVVP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K AF + IE+ ++K R+
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAKE--------AFFYKLVGPLIEVMGSAGEELK-RQ 352
Query: 396 QRILEE-LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGF 454
Q ++E+ LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GF
Sbjct: 353 QALVEQVLKTEEEQFARTLERGLALLDEELAKLTGDT--------LDGETAFRLYDTYGF 404
Query: 455 PVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAEKIP 508
PV++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 405 PVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGFGADYNAM-IRVDSA-------- 455
Query: 509 DTEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYV 568
+EF GY+ L V +L V+GK V ++ G V+L++TPFYAESGGQ+GD G L
Sbjct: 456 -SEFKGYEHLELNGKVTALFVDGKAVEAINAGQQAVVVLDQTPFYAESGGQVGDTGEL-- 512
Query: 569 TQGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTAT 628
+G AV + + +++G H GT+ G L+VG V+A VD R R +++H+AT
Sbjct: 513 -KGAGFTFAVSDTQKYGQAIG----HIGTLSAGSLKVGDAVQADVDEARRARIRLNHSAT 567
Query: 629 HLLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQ 688
HL+ AAL++V+G +Q GSLV LRFDF+ + + +E+ +E L+N I ++
Sbjct: 568 HLMHAALRQVLGTHVAQKGSLVNDKLLRFDFSHNEAMKPSEIRAVEDLVNAQIRRNLPVE 627
Query: 689 TKVMALDDAKRAGAIAMFGEKYGEQVKISS 718
T VM L+ AK GA+A+FGEKY E+V++ S
Sbjct: 628 TNVMDLEAAKAKGAMALFGEKYDERVRVLS 657
>gi|449146553|ref|ZP_21777326.1| alanyl-tRNA synthetase [Vibrio mimicus CAIM 602]
gi|449077785|gb|EMB48746.1| alanyl-tRNA synthetase [Vibrio mimicus CAIM 602]
Length = 860
Score = 573 bits (1477), Expect = e-160, Method: Compositional matrix adjust.
Identities = 312/687 (45%), Positives = 430/687 (62%), Gaps = 51/687 (7%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S D +R+ FL F+ S+GH+++ S+SLVP DPT+L T AGM QFK FLG R RA
Sbjct: 4 STDEVRRAFLSFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDCFLGLEKRAYTRAT 63
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
T+QRC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AIQ+AWEF T LP
Sbjct: 64 TAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIQYAWEFLTGVLQLPK 123
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG--------ADDNFWNSGATGPCGPCSE 215
RL ++VYE DDEAF+IWNK+VG+P + I R+G DNFW G TGPCGPC+E
Sbjct: 124 ERLLVTVYETDDEAFDIWNKKVGIPADRIIRIGDKKGGKKFDSDNFWQMGDTGPCGPCTE 183
Query: 216 IYYDFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLER 272
I+YD H D G D RFIE +N VFMQ+N+ DG++EPL + ++DTG+G+ER
Sbjct: 184 IFYD-HGDHIWGGPPGSPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPSVDTGMGIER 242
Query: 273 IARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDG 332
I+ I+Q V +NYE D+ +IK A++ Y TN +L+++ DH+R+ +L+ DG
Sbjct: 243 ISAIMQGVHSNYEIDVFQTLIKAAADAIGYQYL-----TNQSLRVVADHIRSCAFLIVDG 297
Query: 333 VFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVK 392
V PSN GRGYV+RR+IRRAVR G LG +G L G + +EL
Sbjct: 298 VMPSNEGRGYVLRRIIRRAVRHGNKLGAQGAFFHKLVGPLAEVMGTAGVELK-------- 349
Query: 393 AREQRILEELKR-EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDT 451
++Q ++E++ R EE F +TL+RG +L++ L D LS L G+ F LYDT
Sbjct: 350 -KQQALVEKVLRIEEENFGRTLDRGMSILNEAL-DQLSG-------QMLDGETVFKLYDT 400
Query: 452 FGFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTE 511
+GFP ++T +VA E G S+D GF+ ME QR Q A A + D ++ L + +TE
Sbjct: 401 YGFPADLTNDVARERGFSIDETGFEQAMEEQR---QRAREAGQFGTDYNS-LIKSATNTE 456
Query: 512 FLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQG 571
F GY +++V + V G V +S G ++L+ TPFYAESGGQ GD G L G
Sbjct: 457 FCGYTASRGQSVVREIFVEGAEVSALSAGDKAIIVLDNTPFYAESGGQCGDTGVLKTEAG 516
Query: 572 TNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLL 631
V V+D K LG+ H G + +GVL G +V+AIVD + R ++H+ATHLL
Sbjct: 517 ------VFHVEDTHK-LGNAIAHHGVLAQGVLAKGDQVDAIVDEQRRAAISLNHSATHLL 569
Query: 632 QAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKV 691
AAL+KV+G+ +Q GSLV + LRFDF+ + E++E+ERL+N I + ++T +
Sbjct: 570 HAALRKVLGEHVAQKGSLVRAETLRFDFSHLEAMTAAEIKEVERLVNQEIRRNHSIETNI 629
Query: 692 MALDDAKRAGAIAMFGEKYGEQVKISS 718
M +D+AK GA+A+FGEKY +QV++ S
Sbjct: 630 MNIDEAKAKGAMALFGEKYDDQVRVLS 656
>gi|317049269|ref|YP_004116917.1| alanyl-tRNA synthetase [Pantoea sp. At-9b]
gi|316950886|gb|ADU70361.1| alanyl-tRNA synthetase [Pantoea sp. At-9b]
Length = 875
Score = 573 bits (1477), Expect = e-160, Method: Compositional matrix adjust.
Identities = 307/690 (44%), Positives = 438/690 (63%), Gaps = 64/690 (9%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG+ R RA T+QR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGQDKRDYSRATTAQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFKK+AI +AWE T E F LP +R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKKDAIAYAWELLTGEQWFKLPKDR 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA++IW ++G+P E I R+G A DNFW G TGPCGPCSEI++
Sbjct: 128 LWVTVYETDDEAYDIWANDIGIPRERIIRIGDNKGSAYASDNFWQMGDTGPCGPCSEIFF 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG+++PL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMQPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NYE DL +IK +++ + D +N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYEIDLFAKLIKSVADVTGAT-----DLSNKSLRVIADHIRSCAFLIADGVIP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K AF + IE+ D++ ++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAKD--------AFFYKLVAPLIEVMGSAGEDLQRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ LK EE +F +TLERG LLD+ LA T L G+ F LYDTFGFP
Sbjct: 354 AQVENVLKAEEEQFAKTLERGLALLDEELAKLQGDT--------LDGETVFRLYDTFGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA-------HNAVKLSVDDSADLAEKIP 508
V++T +V E + +D GF++ ME QR++++ A +N +++ DSA
Sbjct: 406 VDLTADVCRERDLKIDEAGFEVAMEQQRQRAREASGFGADYNNVIRI---DSA------- 455
Query: 509 DTEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYV 568
+ F GYD L+ + V++L V+G+ V VS G D V+L+ TPFY ESGGQ+GD G L
Sbjct: 456 -SAFKGYDQLALASTVQALFVDGQQVDHVSAGQDAVVVLDETPFYGESGGQVGDTGVL-- 512
Query: 569 TQGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTAT 628
G N + +V + + +++G H G + +G L VG + A VD + R R +++H+AT
Sbjct: 513 -AGNNAEFSVQDTQKYGQAIG----HIGKLTQGQLRVGDRLNAQVDEERRARIRLNHSAT 567
Query: 629 HLLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQ 688
HLL AAL++V+G +Q GSLV LRFDF+ + E+ ++E ++N I ++
Sbjct: 568 HLLHAALRQVLGDHVAQKGSLVNDKYLRFDFSHFEAMKPQEIRQVEDIVNAQIRRNLAVE 627
Query: 689 TKVMALDDAKRAGAIAMFGEKYGEQVKISS 718
T +M L+ AK GA+A+FGEKY ++V++ S
Sbjct: 628 TNIMDLEAAKAKGAMALFGEKYDQRVRVLS 657
>gi|410631235|ref|ZP_11341913.1| alanyl-tRNA synthetase [Glaciecola arctica BSs20135]
gi|410149222|dbj|GAC18780.1| alanyl-tRNA synthetase [Glaciecola arctica BSs20135]
Length = 865
Score = 573 bits (1476), Expect = e-160, Method: Compositional matrix adjust.
Identities = 304/671 (45%), Positives = 429/671 (63%), Gaps = 40/671 (5%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR FLDF+A+RGH+ + S+SLVP DPT+L T AGM QFK +FLG R +A +SQR
Sbjct: 8 IRCAFLDFFAARGHQKVSSSSLVPANDPTLLFTNAGMNQFKDVFLGTESRSYDKATSSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK EAIQ+AW+F T E GLP ++L
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKTEAIQYAWDFLTTELGLPKDKLL 127
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDF--HPDRG 225
+++Y +DDEAF+IW ++G+P + I R+ DNFW+ G TGPCGPCSEI+YD H G
Sbjct: 128 VTIYHEDDEAFDIWANKIGLPEDRIIRISTSDNFWSMGDTGPCGPCSEIFYDHGEHIWGG 187
Query: 226 CSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYE 285
D RFIE +NLVFMQ+N++ DG+++PL + +IDTG+GLERI+ ILQ V +NYE
Sbjct: 188 PPGSPEEDGDRFIEIWNLVFMQFNRQSDGTMQPLPKPSIDTGMGLERISAILQNVHSNYE 247
Query: 286 TDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVR 345
D+ +I+ A + + D+ + +L++I DH+R+ +L+ DG+ PSN GRGYV+R
Sbjct: 248 IDIFQNLIE-----ATATVVGTTDKQDKSLRVIADHIRSCSFLICDGIIPSNEGRGYVLR 302
Query: 346 RLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKRE 405
R+IRRAVR G LG F + E + ++ A + I + L+ E
Sbjct: 303 RIIRRAVRHGNKLGAS--------EVFFYRLVEALVTQMGDAYPELAANRELIEKVLRTE 354
Query: 406 ELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEE 465
E +F +TLERG +L+ L + S VP G+ F LYDT+GFP ++T +VA E
Sbjct: 355 EEQFSRTLERGMSILNDALNELTSNV-----VP---GELVFKLYDTYGFPADLTNDVARE 406
Query: 466 HGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTLSAKAIVE 525
+S+D +GF M QR+++Q A + D + L +EF GYD ++ +A +
Sbjct: 407 KELSIDEEGFQAAMAAQRKRAQ---QASQFDTDYNEQLKSN-STSEFTGYDQVTNQAEIV 462
Query: 526 SLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVK 585
L NG+ V K+S G + ++L+++PFYAESGGQIGD G L T G+ EV+D
Sbjct: 463 ELFANGQQVEKLSAGEEGVIVLDKSPFYAESGGQIGDTGVLKTTSGS------FEVRDTV 516
Query: 586 KSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQ 645
K LG+ HKG + ++G V+A D R+ K++H+ATHL+ AALK+V+G+ +Q
Sbjct: 517 K-LGNAIAHKGKA-DADFKLGDVVQAEFDVARREAIKLNHSATHLMHAALKQVLGEHVNQ 574
Query: 646 AGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAM 705
GSLV+ DR RFDF+ + + EL+ +E L+N I + LQTK+M LD+AK AGA+A+
Sbjct: 575 KGSLVSADRFRFDFSHFEAVTNVELQSVETLVNQQIRANHSLQTKLMNLDEAKDAGAMAL 634
Query: 706 FGEKYGEQVKI 716
FGEKY E V++
Sbjct: 635 FGEKYAEDVRV 645
>gi|342213831|ref|ZP_08706550.1| alanine--tRNA ligase [Veillonella sp. oral taxon 780 str. F0422]
gi|341597419|gb|EGS39978.1| alanine--tRNA ligase [Veillonella sp. oral taxon 780 str. F0422]
Length = 869
Score = 573 bits (1476), Expect = e-160, Method: Compositional matrix adjust.
Identities = 312/678 (46%), Positives = 431/678 (63%), Gaps = 38/678 (5%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
+G+ +R+ +L+F+ S+GH S SLVP+ DP++LL AGM KP F GK+ R
Sbjct: 2 TGNELRQAYLNFFESKGHLKQESYSLVPDNDPSLLLIGAGMAPLKPFFTGKLVPPCTRIT 61
Query: 108 TSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
TSQ+ IRT D+ENVGRT+RHHTFFEMLGNFSFGDYFKKEAI WAWEF T L +L+
Sbjct: 62 TSQKSIRTGDIENVGRTARHHTFFEMLGNFSFGDYFKKEAIHWAWEFLTEVIKLDKEKLY 121
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCS 227
++VY DD EA++ W+ E+G+P +HI R+ +DNFW G GPCGP SEI++D P+RGC
Sbjct: 122 VTVYPDDQEAYDTWHNEIGLPEDHISRL--EDNFWEIGE-GPCGPDSEIFFDLGPERGCD 178
Query: 228 DVDLG---DDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNY 284
D + D RF+E +NLVF Q+N+ +G+ EPL +KNIDTG GLER+A +LQ +N+
Sbjct: 179 DPNCAPGCDCDRFLEIWNLVFTQFNRTAEGTYEPLAKKNIDTGAGLERLASVLQNKESNF 238
Query: 285 ETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVV 344
ETDLIFPII+ ++ A V+Y ++ T+++LK+I DH+RAIV L++DGV PSN GRGYV+
Sbjct: 239 ETDLIFPIIEATAKKAGVTY-HTDANTDVSLKVIADHIRAIVALIADGVLPSNEGRGYVL 297
Query: 345 RRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKR 404
RR++RRAVR GRLLGI +G FL + + +++ +++ ++ + +
Sbjct: 298 RRILRRAVRHGRLLGI--------QGPFLVPLVDIVVDILGGAITNIVEKQDFVKRVVAN 349
Query: 405 EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAE 464
EE RF QTL G +L Q+L D L + + +VP GQD F LYDT+GFP E+T+E+A
Sbjct: 350 EEERFNQTLASGLDMLSQLL-DTL-KAESATTVP---GQDVFKLYDTYGFPWELTEEIAS 404
Query: 465 EHGVSVDMKGFDIEMENQRRQSQAAHNAV--KLSVDDSADLA-EKIPDTEFLGYDTLSAK 521
E G ++D GF+ M QR +++ A V K++ D L+ E I D E SA
Sbjct: 405 EAGFTIDQAGFESAMNEQRTRAREAREDVDAKVATPDITHLSNEHISDDE-------SAT 457
Query: 522 AIVESLLVNG-KPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVE 580
A L+ G K + + G DV +++ TPF+AE GGQ+GD GF+ G VE
Sbjct: 458 ASTVLLIGEGAKAIERAEDGQDVTIIVKTTPFHAEGGGQLGDTGFIVGPLGK------VE 511
Query: 581 VKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIG 640
V KK H GT+ EG + V EV VD + RQ +HTATHLL AAL+ V+G
Sbjct: 512 VHTAKKLPEGTTYHVGTVVEGSISVNDEVTFEVDVERRQHMARNHTATHLLHAALRSVLG 571
Query: 641 QETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRA 700
+QAGSLV D LRFDF P+ EL+ I ++N I A+ L+ + M++D AK
Sbjct: 572 THVNQAGSLVTPDYLRFDFTHFSPVTAEELQTITNMVNEQILRASTLEVETMSIDAAKAK 631
Query: 701 GAIAMFGEKYGEQVKISS 718
GA+A+FGEKYG +V++ S
Sbjct: 632 GAMALFGEKYGSEVRVVS 649
>gi|340756426|ref|ZP_08693038.1| alanyl-tRNA synthetase [Fusobacterium sp. D12]
gi|421501385|ref|ZP_15948350.1| alanine--tRNA ligase [Fusobacterium necrophorum subsp. funduliforme
Fnf 1007]
gi|313685907|gb|EFS22742.1| alanyl-tRNA synthetase [Fusobacterium sp. D12]
gi|402266061|gb|EJU15512.1| alanine--tRNA ligase [Fusobacterium necrophorum subsp. funduliforme
Fnf 1007]
Length = 866
Score = 573 bits (1476), Expect = e-160, Method: Compositional matrix adjust.
Identities = 297/676 (43%), Positives = 432/676 (63%), Gaps = 39/676 (5%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
+G+ IR++F++F+ S+ HK SASL+P+DPT+LLT+AGM+ FKP FLG+ PR T
Sbjct: 3 TGNEIRQKFIEFFESKAHKHFESASLIPDDPTLLLTVAGMVPFKPYFLGQKEAPCPRVTT 62
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
Q+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFKKEAI W+WEF T GLP ++LW+
Sbjct: 63 YQKCIRTNDLENVGRTARHHTFFEMLGNFSFGDYFKKEAIVWSWEFVTEVLGLPKDKLWV 122
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
+V+ DDEA +IW +E P E I RMG +N+W +G TG CGPCSEI+ D P G +
Sbjct: 123 TVFTTDDEAEKIWIEECHFPKERIVRMGESENWWAAGPTGSCGPCSEIHVDLGPAYGGDE 182
Query: 229 V----DLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNY 284
D G D R+IE +NLVF ++N+ +DG LEPL +KNIDTG GLERIA ++Q NN+
Sbjct: 183 NSKIGDEGTDNRYIEIWNLVFTEWNRMEDGHLEPLPKKNIDTGAGLERIAAMVQGKENNF 242
Query: 285 ETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVV 344
ETDL+FP++++A L N +Y N + +LK+I DH RA+ +L+ DGV PSN GRGY++
Sbjct: 243 ETDLLFPLVEEAGRLTNSTY-HENPEKDFSLKVITDHSRAVTFLIHDGVIPSNEGRGYIL 301
Query: 345 RRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKR 404
RR++RRAVR GRLLG K FL + +K +E D+ A + I + +K
Sbjct: 302 RRILRRAVRHGRLLGQK--------ELFLYKMVKKVVEQFAVAYPDLAANMENIQKIVKI 353
Query: 405 EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAE 464
EE +F TL++G +L+++ +A AL + +L G+ F +YDT+GFP E+T+E+
Sbjct: 354 EEEKFSNTLDQGIQLVNEQIALALQAGK-----TKLDGEITFKMYDTYGFPYELTEEICH 408
Query: 465 EHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPD----TEFLGYDTLSA 520
E G++V + F +ME Q+ +++AA + DS EK D TEF GY +
Sbjct: 409 EKGIAVSQEEFLEKMEEQKEKARAARAVIMEKGQDS--FIEKFYDTHGVTEFTGYHSSQE 466
Query: 521 KAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVE 580
KA L+N ++ + + ++ ++TPFYAESGGQ+GD G ++ Q V++
Sbjct: 467 KA----KLLN----VRTREDGTLLLIFDKTPFYAESGGQVGDRGMIF---SNAFQGKVLD 515
Query: 581 VKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIG 640
VK K+ +F+H G L+ G E VD K R +HTATHLL AL++V+G
Sbjct: 516 VKKQKE----IFIHVVESISGELKEGEECSLEVDMKYRAAVSKNHTATHLLHKALREVLG 571
Query: 641 QETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRA 700
QAGSLV ++LRFDF+ + + + +++ +E +N I +A ++ ++++AK
Sbjct: 572 THVQQAGSLVDSEKLRFDFSHYEAMTEEQIKLVEERVNEKISEAIAVEISHKSMEEAKAC 631
Query: 701 GAIAMFGEKYGEQVKI 716
GA+ +FG+KYG+ V++
Sbjct: 632 GAMMLFGDKYGDTVRV 647
>gi|336323805|ref|YP_004603772.1| alanyl-tRNA synthetase [Flexistipes sinusarabici DSM 4947]
gi|336107386|gb|AEI15204.1| alanyl-tRNA synthetase [Flexistipes sinusarabici DSM 4947]
Length = 872
Score = 573 bits (1476), Expect = e-160, Method: Compositional matrix adjust.
Identities = 300/683 (43%), Positives = 442/683 (64%), Gaps = 39/683 (5%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
+G IR++FLDF+ + H ++ S+SLVPE DPT+L T AGM QFK FLG R RAA
Sbjct: 2 TGKEIRQKFLDFFEQKDHTIVKSSSLVPENDPTLLFTNAGMNQFKDTFLGVEKRNYSRAA 61
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
T Q+ +R ND+ENVGRT+RHHTFFEMLGNFSFGDYFK+ I +AWEF T GL
Sbjct: 62 TCQKVVRAGGKHNDLENVGRTARHHTFFEMLGNFSFGDYFKRGVINYAWEFLTEVLGLDK 121
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPD 223
+L+ISV+ DDEAF IW E+G+P E I ++G +NFW+ G TGPCGPCSEI+ D P
Sbjct: 122 EKLYISVFHKDDEAFNIWKNEIGIPEERISKLGEKENFWSMGDTGPCGPCSEIHIDQGPK 181
Query: 224 RGC--SDVDLGDDT-RFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKV 280
GC SD D D RF+E +NLVFMQY++ +G+L PL + +IDTG+GLERIA ++Q V
Sbjct: 182 IGCGRSDCDPECDCDRFLELWNLVFMQYDRDAEGTLHPLPKPSIDTGMGLERIAAVVQNV 241
Query: 281 PNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGR 340
+N++TDLI PII++ S +A + Y + N++ +++L++I DH RA +L+SDGV P+N GR
Sbjct: 242 TSNFDTDLIRPIIEETSSIAGIRY-KDNEKFDISLRVIADHARATTFLISDGVIPANEGR 300
Query: 341 GYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILE 400
GYV++R++RRA+R GRL+GIK + F I E ++ + ++ ++ I +
Sbjct: 301 GYVLKRIMRRAMRHGRLIGIKEN--------FFYKICEFVVDFMSDHYLELVDKKNYISK 352
Query: 401 ELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITK 460
+K+EE RF TL G K+ + + + + + +P G++ F LYDT+GFPV++ +
Sbjct: 353 IVKQEESRFKNTLTTGLKITESL----IEKYKYDKYIP---GKEIFTLYDTYGFPVDLLE 405
Query: 461 EVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-----LAEKIPDTEFLGY 515
++AEE+G S+DM+GF EM Q+ +++ A + S D + D LA K TEF GY
Sbjct: 406 DIAEENGFSLDMEGFKKEMSAQQEKAKRAWSG---SGDTAVDERFKKLASKFR-TEFDGY 461
Query: 516 DTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
D LS ++ + ++ G + +G +E++L++TPFY E GG+ GD G++
Sbjct: 462 DKLSLESEILGIISKGNNTEEAKQGDKIEIILSKTPFYPEGGGETGDKGYI------KSD 515
Query: 576 TAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAAL 635
AV EVKD KK S+ VH+ I G L+VG + A V+ + R+ + +HT+THL+ AL
Sbjct: 516 NAVAEVKDTKKYAESLIVHEAEILNGTLKVGEIITAEVNSEFRKAVEKNHTSTHLIHKAL 575
Query: 636 KKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALD 695
++V+G Q+GSLV ++LRFDF PL E+ EIE ++N I + ++ ++ +D
Sbjct: 576 REVLGDHVRQSGSLVDSEKLRFDFTHFSPLSREEIVEIENIVNKKIQENLPVKKEITDID 635
Query: 696 DAKRAGAIAMFGEKYGEQVKISS 718
A + GA+A+FGEKYG+ V++ S
Sbjct: 636 SAIQKGAMAIFGEKYGDTVRVVS 658
>gi|156975767|ref|YP_001446674.1| alanyl-tRNA synthetase [Vibrio harveyi ATCC BAA-1116]
gi|205830285|sp|A7MYT5.1|SYA_VIBHB RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|156527361|gb|ABU72447.1| hypothetical protein VIBHAR_03511 [Vibrio harveyi ATCC BAA-1116]
Length = 865
Score = 572 bits (1475), Expect = e-160, Method: Compositional matrix adjust.
Identities = 315/687 (45%), Positives = 437/687 (63%), Gaps = 46/687 (6%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S D +R FL F+ S+GH+++ S+SLVP DPT+L T AGM QFK FLG R RA
Sbjct: 4 STDEVRNAFLKFFESKGHQIVESSSLVPHNDPTLLFTNAGMNQFKDCFLGLEKRAYTRAT 63
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
T+QRC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI +AWEF T LPA
Sbjct: 64 TAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIAFAWEFLTETLKLPA 123
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG--------ADDNFWNSGATGPCGPCSE 215
+RL ++VYE DDEAF+IWNK+VGVP + I R+G DNFW G TGPCGPC+E
Sbjct: 124 DRLLVTVYETDDEAFDIWNKKVGVPADRIIRIGDKKGGKPFESDNFWQMGDTGPCGPCTE 183
Query: 216 IYYDF--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERI 273
I+YD H G D RFIE +N VFMQ+N++ DG++EPL + ++DTG+G+ERI
Sbjct: 184 IFYDHGEHIWGGRPGTPEEDGDRFIEIWNNVFMQFNRQADGTMEPLPKPSVDTGMGIERI 243
Query: 274 ARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGV 333
+ I+Q V +NYE D+ +IK A+E+ + Y D +N +L++I DH+R+ +L+ DGV
Sbjct: 244 SAIMQGVHSNYEIDVFQALIKAAAEV--IGY---EDLSNQSLRVIADHIRSCSFLIVDGV 298
Query: 334 FPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKA 393
PSN GRGYV+RR+IRRAVR G LG +GAF + E+ ++K
Sbjct: 299 MPSNEGRGYVLRRIIRRAVRHGNKLGA--------QGAFFHKLVGVLAEIMGTAGEELK- 349
Query: 394 REQRILEELKR-EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTF 452
R+Q ++E++ R EE F +TLERG +L++ L D +S G V L G+ F LYDT+
Sbjct: 350 RQQAVVEKVLRIEEENFGRTLERGMAILNEAL-DNISSQGTDGKV--LDGETVFKLYDTY 406
Query: 453 GFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKI-PDTE 511
GFP ++T +VA E ++D +GF+ ME QR++++ A N D +A A K+ TE
Sbjct: 407 GFPADLTNDVAREREFAIDEEGFEKAMEEQRQRAREAGN---FGTDYNA--AIKVDTQTE 461
Query: 512 FLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQG 571
F GY + V ++ V G V +S G ++L TPFYAESGGQ GD G + G
Sbjct: 462 FCGYTGTKGSSSVAAMFVEGNEVESLSAGDKAIIVLGETPFYAESGGQCGDAGEIRTESG 521
Query: 572 TNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLL 631
V V+D +K LG+ H G + EGVL G EV IVD + R ++H+ATHLL
Sbjct: 522 ------VFRVEDTQK-LGNAIAHHGVMAEGVLAKGDEVATIVDAERRAAISLNHSATHLL 574
Query: 632 QAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKV 691
AAL++++G+ +Q GSLV D LRFDF+ + EL+E+ERL+N I ++++T V
Sbjct: 575 HAALRQLLGEHVTQKGSLVKADGLRFDFSHLEAVTAAELKEVERLVNAQIRRNHVIETNV 634
Query: 692 MALDDAKRAGAIAMFGEKYGEQVKISS 718
M ++ AK+ GA+A+FGEKY ++V++ S
Sbjct: 635 MDIESAKKKGAMALFGEKYDDEVRVLS 661
>gi|381402648|ref|ZP_09927332.1| alanyl-tRNA synthetase [Pantoea sp. Sc1]
gi|380735847|gb|EIB96910.1| alanyl-tRNA synthetase [Pantoea sp. Sc1]
Length = 875
Score = 572 bits (1475), Expect = e-160, Method: Compositional matrix adjust.
Identities = 311/681 (45%), Positives = 429/681 (62%), Gaps = 50/681 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG+ R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHEVVTSSSLVPNNDPTLLFTNAGMNQFKDVFLGQDKRDYTRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFKKEAI +AWE T E FGLP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKKEAIGFAWELLTSEQWFGLPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+ IW KE+GVP E I R+G A DNFW G TGPCGPCSEI+Y
Sbjct: 128 LWVTVYETDDEAYAIWEKEIGVPRERIIRIGDNKGGAYASDNFWQMGDTGPCGPCSEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++ PL + ++DTG+GLERI+
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMLPLPKPSVDTGMGLERISA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NYE DL +I+ +++ + D +N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYEIDLFQKLIQAVAQVTGAT-----DLSNKSLRVIADHIRSCAFLIADGVIP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K AF + +E+ +++ ++
Sbjct: 302 SNESRGYVLRRIIRRAVRHGNMLGAKE--------AFFYKLVAPLVEVMGAAGEELQRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ F LYDTFGFP
Sbjct: 354 AQVEQVLKSEEEQFARTLERGLALLDEELAKLQGDT--------LDGEIVFRLYDTFGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGY 515
++T +V E + +D GF+ ME QR Q A A D S ++ + F GY
Sbjct: 406 ADLTADVCRERNLKIDEAGFEQAMEQQR---QRAREASGFGADYS-NVIRIDAASSFKGY 461
Query: 516 DTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
D L A V++L V G+ V +VS G D V+L+ TPFY ESGGQ+GD G L +G N +
Sbjct: 462 DQLDLAATVKALYVAGEAVDEVSAGQDAVVVLDETPFYGESGGQVGDTGLL---KGKNAE 518
Query: 576 TAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAAL 635
+V + + +++G H G + G L +G +EA VD R R +++H+ATHLL AAL
Sbjct: 519 FSVQDTQKYGQAIG----HVGKLTAGQLRIGDRLEAQVDAARRARIRLNHSATHLLHAAL 574
Query: 636 KKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALD 695
++V+G+ Q GSLV LRFDF+ + E+ ++E ++N I ++T+VM LD
Sbjct: 575 RQVLGEHVGQKGSLVNDKYLRFDFSHFEAMKPQEIRQVEDIVNAQIRRNLPVETEVMDLD 634
Query: 696 DAKRAGAIAMFGEKYGEQVKI 716
AK GA+A+FGEKY ++V++
Sbjct: 635 AAKSKGAMALFGEKYDQRVRV 655
>gi|127512149|ref|YP_001093346.1| alanyl-tRNA synthetase [Shewanella loihica PV-4]
gi|205830205|sp|A3QC89.1|SYA_SHELP RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|126637444|gb|ABO23087.1| alanyl-tRNA synthetase [Shewanella loihica PV-4]
Length = 874
Score = 572 bits (1475), Expect = e-160, Method: Compositional matrix adjust.
Identities = 308/679 (45%), Positives = 429/679 (63%), Gaps = 46/679 (6%)
Query: 52 SIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQ 110
++R FL+F+ GH+V+ S+SLVP DPT+L T AGM QFK +FLG+ R RA T+Q
Sbjct: 7 ALRSAFLEFFRRNGHQVVDSSSLVPGNDPTLLFTNAGMNQFKDVFLGEDKRDYSRATTAQ 66
Query: 111 RCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRL 166
RC+R ND++NVG T+RHHTFFEMLGNFSFGDYFK++AI++AW F T E LP RL
Sbjct: 67 RCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKQDAIRFAWTFLTEELKLPKERL 126
Query: 167 WISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYYD 219
++VYE DDEAFEIWNKE+GV E+I R+G A DNFW G TGPCGPC+EI+YD
Sbjct: 127 CVTVYETDDEAFEIWNKEIGVAAENIIRIGDNKGAAYASDNFWQMGDTGPCGPCTEIFYD 186
Query: 220 F--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARIL 277
H G D RFIE +N+VFMQYN++ DG+++PL + ++DTG+G+ERIA I+
Sbjct: 187 HGEHIWGGRPGTPEEDGDRFIEIWNIVFMQYNRQADGTMDPLPKPSVDTGMGIERIAAIM 246
Query: 278 QKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSN 337
Q V +NYE D+ +IKK +E+ V+ D N +L+++ DH+R+ +L++DGV PSN
Sbjct: 247 QGVHSNYEIDIFQSLIKKTAEILGVT-----DLENKSLRVVADHIRSCAFLVADGVMPSN 301
Query: 338 IGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQR 397
GRGYV+RR+IRRAVR G LG AF + IE+ ++ A +
Sbjct: 302 EGRGYVLRRIIRRAVRHGNKLGAT--------EAFFYKLVPTLIEVMGDAAKELVATQAI 353
Query: 398 ILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVE 457
+ + LK EE +F +TLERG +LD L+ + L G+ AF LYDT+GFPV+
Sbjct: 354 VEKALKAEEEQFARTLERGLGILDNALSQLEGK--------ELDGETAFKLYDTYGFPVD 405
Query: 458 ITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDT 517
+T +V E ++VD GF+ M QR ++QAA +DS + +TEF GY
Sbjct: 406 LTADVCRERDITVDEAGFEAAMAEQRSRAQAA-GQFDTDYNDSLKID---AETEFCGYSD 461
Query: 518 LSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTA 577
L+ +A V L V+G+ V +++G V+L+ TPFY ESGGQ GD G L + +
Sbjct: 462 LNGEAKVIGLYVDGQAVDALAEGDQGVVVLDSTPFYGESGGQCGDKGLL------SAEGV 515
Query: 578 VVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKK 637
EVKD +K G H G ++ G + +G+ + A VD KLR R +++H+ THLL AAL++
Sbjct: 516 EFEVKDTQK-YGQAMGHIGLVKAGSIAMGQTLNAAVDKKLRHRTELNHSVTHLLHAALRQ 574
Query: 638 VIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDA 697
V+G SQ GSLV +RLRFDF+ + EL+++E L+N I + L+ +VM +D A
Sbjct: 575 VLGTHVSQKGSLVEPERLRFDFSHFEAVKREELKQVEDLVNTQIRRNHELKAEVMDIDQA 634
Query: 698 KRAGAIAMFGEKYGEQVKI 716
K GA+A+FGEKY QV++
Sbjct: 635 KEKGAMALFGEKYDSQVRV 653
>gi|421846627|ref|ZP_16279773.1| alanyl-tRNA ligase [Citrobacter freundii ATCC 8090 = MTCC 1658]
gi|411771957|gb|EKS55604.1| alanyl-tRNA ligase [Citrobacter freundii ATCC 8090 = MTCC 1658]
gi|455643428|gb|EMF22556.1| alanyl-tRNA ligase [Citrobacter freundii GTC 09479]
Length = 875
Score = 572 bits (1475), Expect = e-160, Method: Compositional matrix adjust.
Identities = 318/693 (45%), Positives = 438/693 (63%), Gaps = 70/693 (10%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQYAWELLTGENWFALPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYETDDEAYEIWEKEVGIPRERIIRIGDNKGAAYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR------GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLER 272
D H D G ++ D GD R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLER
Sbjct: 188 D-HGDHIWGGPPGSAEED-GD--RYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLER 243
Query: 273 IARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDG 332
IA +LQ V +NYE DL +I+ +++ + D +N +L++I DH+R+ +L++DG
Sbjct: 244 IAAVLQHVNSNYEIDLFRSLIESVAKVTGAT-----DLSNKSLRVIADHIRSCAFLIADG 298
Query: 333 VFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVK 392
V PSN RGYV+RR+IRRAVR G +LG K L G + + EL
Sbjct: 299 VVPSNENRGYVLRRIIRRAVRHGNMLGAKDTFFYKLVGPLVDVMGSAGEELK-------- 350
Query: 393 AREQRILEE-LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDT 451
R+Q ++E+ LK EE +F +TLERG LLD+ LA T L G+ AF LYDT
Sbjct: 351 -RQQAMVEQVLKTEEEQFARTLERGLALLDEELAKLSGDT--------LDGETAFRLYDT 401
Query: 452 FGFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAE 505
+GFPV++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGFGADYNAM-IRVDGA----- 455
Query: 506 KIPDTEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGF 565
+EF GY+ L V +L V+GK V ++ G D V+L++TPFYAESGGQ+GD G
Sbjct: 456 ----SEFKGYEQLELNGKVTALFVDGKAVDAINAGQDAVVVLDQTPFYAESGGQVGDKGE 511
Query: 566 LYVTQGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHH 625
L +G AV + + +++G H G + G L++G V+A VD R R +++H
Sbjct: 512 L---KGAGFAFAVSDTQKYGQAIG----HIGKLSAGSLKIGDAVQADVDEARRARIRLNH 564
Query: 626 TATHLLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDAN 685
+ATHL+ AAL++V+G +Q GSLV LRFDF+ + E+ +E L+N I
Sbjct: 565 SATHLMHAALRQVLGTHVAQKGSLVNDKLLRFDFSHTEAMKPAEIRAVEDLVNAQIRRNL 624
Query: 686 LLQTKVMALDDAKRAGAIAMFGEKYGEQVKISS 718
++T +M L+ AK GA+A+FGEKY + V++ S
Sbjct: 625 SIETNIMDLEAAKAKGAMALFGEKYDDHVRVLS 657
>gi|307245509|ref|ZP_07527596.1| Alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 1
str. 4074]
gi|306853568|gb|EFM85786.1| Alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 1
str. 4074]
Length = 874
Score = 572 bits (1474), Expect = e-160, Method: Compositional matrix adjust.
Identities = 308/683 (45%), Positives = 433/683 (63%), Gaps = 54/683 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH V+PS+SLVPE DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 7 IRQSFLDFFHSKGHTVVPSSSLVPENDPTLLFTNAGMNQFKDVFLGLEKRPYTRATTAQR 66
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEM+GNFSFGDYFK +AIQ+ WE+ T GLP +
Sbjct: 67 CVRAGGKHNDLENVGYTARHHTFFEMMGNFSFGDYFKHDAIQFGWEYLTSPQWLGLPKEK 126
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
L+++VYE DDEA++IWNK VGVP +HI R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 127 LYVTVYETDDEAYDIWNKIVGVPTDHIIRIGDNKGAPYASDNFWAMGDTGPCGPCTEIFY 186
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H + G D R+IE +N+VFMQ+N+ DG++E L + ++DTG+GLER+
Sbjct: 187 D-HGETFWGGLPGSPEEDGDRYIEVWNIVFMQFNRLADGTMEKLPKPSVDTGMGLERMTA 245
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
++Q V +NYETD+ +IK+ + L NVS D N +L+++ DH+RA YL++DGV P
Sbjct: 246 VMQHVNSNYETDIFQTLIKEVAGLLNVS-----DLDNKSLRVVADHIRACSYLIADGVVP 300
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN GRGYV+RR+IRRAVR G LLG K AF + + H + ++
Sbjct: 301 SNEGRGYVLRRIIRRAVRHGNLLGAKE--------AFFYKLVPTLATVMGHAGEVLTQKQ 352
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
I + LK EE +F +TLERG LL+ DAL++ + LSG+ AF LYDT+GFP
Sbjct: 353 AHIQKTLKAEEEQFARTLERGLALLE----DALTKVENN----TLSGEVAFKLYDTYGFP 404
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGY 515
+++T +V E +++D GF+ EM QR +++A+ N D ++ + T+F+GY
Sbjct: 405 LDLTADVCRERELTIDKAGFEAEMTAQRERAKASSNFGT----DYNNVIKVEGQTDFIGY 460
Query: 516 DTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
D L A+A + L NGK V + G ++L++TPFYAE GGQ+GD G +
Sbjct: 461 DNLEAQATIVGLFSNGKAVDTIQSGESAVIILDQTPFYAEMGGQVGDSGLI--------S 512
Query: 576 TAVVE--VKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQA 633
T + V D +K G VF H G + G L +G +V A VD R +H+ATHLL +
Sbjct: 513 TGICNFAVNDTQK-YGQVFGHIGQLTSGSLSIGDKVTATVDATRRVAITANHSATHLLHS 571
Query: 634 ALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMA 693
AL++V+G +Q GSLV+ + LRFDF+ + ++LEEIER++N I + + + M
Sbjct: 572 ALREVLGDHVAQKGSLVSENILRFDFSQPEAISKSQLEEIERIVNRKIRENIQVTIETMD 631
Query: 694 LDDAKRAGAIAMFGEKYGEQVKI 716
++ AK+ GA+A+FGEKYG+ V++
Sbjct: 632 IESAKKKGAMALFGEKYGDVVRV 654
>gi|94263078|ref|ZP_01286897.1| Alanine--tRNA ligase [delta proteobacterium MLMS-1]
gi|93456621|gb|EAT06729.1| Alanine--tRNA ligase [delta proteobacterium MLMS-1]
Length = 925
Score = 572 bits (1474), Expect = e-160, Method: Compositional matrix adjust.
Identities = 310/678 (45%), Positives = 426/678 (62%), Gaps = 31/678 (4%)
Query: 50 GDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
G++IR++FLD++ASR H V+ S++LVP +DPT+L T AGM+QFK +F G+ R RA +
Sbjct: 48 GNTIRQKFLDYFASRQHTVVASSALVPHDDPTLLFTNAGMVQFKKVFTGEEQRDYRRAVS 107
Query: 109 SQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPAN 164
QRC+R ND++NVG T+RHHTFFEMLGNFSFGDYFK+EAI+ AW+F T E GL
Sbjct: 108 CQRCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKEEAIRLAWDFLTRELGLSPA 167
Query: 165 RLWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDR 224
LW+SVYEDDDEA IW G+P I R+G DNFW G TGPCGPCSEI+ D
Sbjct: 168 NLWVSVYEDDDEAHRIWEGIEGLPPGRIVRLGEKDNFWAMGDTGPCGPCSEIHLDQGAAV 227
Query: 225 GCSDVDLGDDT---RFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVP 281
C + G D RF+E +NLVFM+Y + DG+++PL + +IDTG+GLERIA ++Q
Sbjct: 228 PCQSPECGVDCDCDRFLEIWNLVFMEYERGADGTMKPLPRPSIDTGMGLERIAAVVQGKH 287
Query: 282 NNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRG 341
NNY++DL P+I + ELA V Y +S R + L++I DH RA +L++DGV P+N GRG
Sbjct: 288 NNYDSDLFLPLIHRTCELAGVEYGRSA-RVDTALRVIADHARATTFLVADGVLPANEGRG 346
Query: 342 YVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEE 401
YV+RR++RRA+R GR LG L FL + +E S ++A + + +
Sbjct: 347 YVLRRVMRRAIRFGRGLG--------LSEPFLGEVCATVLETMGGAYSHLEASRELLRKV 398
Query: 402 LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKE 461
++ EE RF++TL+ G MLA L+R +ESG L+G+ F LYDT+GFPV+I K+
Sbjct: 399 VRHEEERFLETLDHGLG----MLAAELTRLKESGERG-LAGEFIFKLYDTYGFPVDIAKD 453
Query: 462 VAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSA--DLAEKIPDTEFLGYDTLS 519
VA+E G++ D GF+ M QR+QS+ + L +L E TEF+GY +
Sbjct: 454 VAQEEGLAADEAGFEEAMARQRQQSRQSWKGGGLGELGPGFRELLEGGVSTEFVGYQSRR 513
Query: 520 AKAIVESLL-VNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAV 578
A + +LL V+GK + + G V ++ ++TPFYAE GGQIGD G + G +
Sbjct: 514 HHAPLTALLDVDGKMLNTATAGQQVVLVCSQTPFYAEGGGQIGDSGEITGLHGRARVDNT 573
Query: 579 VEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKV 638
+ V + + H+ + EG LE G EV V RQR HHTATHLL AAL++V
Sbjct: 574 IRVGE------QLVAHQAEVVEGRLERGEEVLLAVGEGRRQRVAAHHTATHLLHAALRRV 627
Query: 639 IGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAK 698
+G+ QAGSLV RLRFDF PL + E+ERL+N I N L+T ++ D+A
Sbjct: 628 LGEHVKQAGSLVEPGRLRFDFTHFSPLGTAAIREVERLVNVEIRANNSLETAMVNRDEAL 687
Query: 699 RAGAIAMFGEKYGEQVKI 716
++GA A+FGEKYGE V++
Sbjct: 688 QSGAAALFGEKYGETVRV 705
>gi|419831874|ref|ZP_14355341.1| alanine--tRNA ligase [Vibrio cholerae HC-61A2]
gi|424635482|ref|ZP_18073506.1| alanyl-tRNA synthetase [Vibrio cholerae HC-55A1]
gi|408027652|gb|EKG64614.1| alanyl-tRNA synthetase [Vibrio cholerae HC-55A1]
gi|408652281|gb|EKL23506.1| alanine--tRNA ligase [Vibrio cholerae HC-61A2]
Length = 853
Score = 572 bits (1474), Expect = e-160, Method: Compositional matrix adjust.
Identities = 312/683 (45%), Positives = 432/683 (63%), Gaps = 51/683 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
+R+ FL F+ S+GH+++ S+SLVP DPT+L T AGM QFK FLG R RA T+QR
Sbjct: 1 MRRAFLSFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDCFLGLEKRAYTRATTAQR 60
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AIQ+AWEF T LP RL
Sbjct: 61 CVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIQYAWEFLTDVLQLPKERLL 120
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMG--------ADDNFWNSGATGPCGPCSEIYYD 219
++VYE DDEAF+IWNK+VG+P + I R+G DNFW G TGPCGPC+EI+YD
Sbjct: 121 VTVYETDDEAFDIWNKKVGIPADRIIRIGDKKGGKKFDSDNFWQMGDTGPCGPCTEIFYD 180
Query: 220 FHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARI 276
H D G D RFIE +N VFMQ+N+ DG++EPL + ++DTG+G+ERI+ I
Sbjct: 181 -HGDHIWGGPPGSPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPSVDTGMGIERISAI 239
Query: 277 LQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPS 336
+Q V +NYE D+ +IK A+ + Y D TN +L+++ DH+R+ +L+ DGV PS
Sbjct: 240 MQGVHSNYEIDVFQTLIKAAA--GAIGY---QDLTNQSLRVVADHIRSCAFLIVDGVMPS 294
Query: 337 NIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQ 396
N GRGYV+RR+IRRAVR G LG +G L G + +EL ++Q
Sbjct: 295 NEGRGYVLRRIIRRAVRHGNKLGAQGAFFHKLVGPLAEVMGTAGVELK---------KQQ 345
Query: 397 RILEELKR-EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++E++ R EE F +TL+RG +L+ DAL + SG V L G+ F LYDT+GFP
Sbjct: 346 ALVEKVLRIEEENFGRTLDRGMSILN----DALDQL--SGQV--LDGETVFKLYDTYGFP 397
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGY 515
++T +VA E G S+D GF+ ME QR Q A A + D ++ L + +TEF GY
Sbjct: 398 ADLTNDVARERGFSIDEAGFEQAMEEQR---QRAREAGQFGTDYNS-LIKSSTNTEFCGY 453
Query: 516 DTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
+++V + V G V +S G ++L+ TPFYAESGGQ GD G L G
Sbjct: 454 TASRGQSVVREMFVEGAEVSTLSAGDKAIIVLDNTPFYAESGGQCGDTGVLKTDAG---- 509
Query: 576 TAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAAL 635
+ V+D +K LG+ H G + +GVL G +V+AIVD K R ++H+ATHLL AAL
Sbjct: 510 --IFHVEDTQK-LGNAIAHHGVLAQGVLATGDQVDAIVDEKRRAAISLNHSATHLLHAAL 566
Query: 636 KKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALD 695
+KV+G+ +Q GSLV + LRFDF+ + E++E+ERL+N + + ++T +M +D
Sbjct: 567 RKVLGEHVAQKGSLVRAETLRFDFSHLEAMTAAEIKEVERLVNQEVRRNHSIETNIMNID 626
Query: 696 DAKRAGAIAMFGEKYGEQVKISS 718
+AK GA+A+FGEKY +QV++ S
Sbjct: 627 EAKAKGAMALFGEKYDDQVRVLS 649
>gi|431794400|ref|YP_007221305.1| alanyl-tRNA synthetase [Desulfitobacterium dichloroeliminans LMG
P-21439]
gi|430784626|gb|AGA69909.1| alanyl-tRNA synthetase [Desulfitobacterium dichloroeliminans LMG
P-21439]
Length = 896
Score = 572 bits (1473), Expect = e-160, Method: Compositional matrix adjust.
Identities = 313/679 (46%), Positives = 436/679 (64%), Gaps = 34/679 (5%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
+G+ +R+ FL F+ S+GH++LPSASL+P +DPT+LLT+AGM+ FKP F+ KV PRA
Sbjct: 21 TGNQLREMFLKFFESKGHRILPSASLIPKDDPTLLLTVAGMVPFKPYFMRKVEPPFPRAT 80
Query: 108 TSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
TSQ+C+RT D+E VG+T+RHHTFFEMLGNFSFGDYFK +AI WAWEF T LP +LW
Sbjct: 81 TSQKCVRTPDLEVVGKTARHHTFFEMLGNFSFGDYFKSDAIPWAWEFVTEVLKLPVEQLW 140
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGAD-DNFWNSGATGPCGPCSEIYYDFHPDRGC 226
I+V+ +D+EA +W ++ V + R+ D +N W +G GPCG CSEIY D RGC
Sbjct: 141 ITVHPEDEEAKALWIEKTSVSPD---RIAYDPENLWAAGPVGPCGYCSEIYVDLGESRGC 197
Query: 227 SDVDLG---DDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNN 283
+D D RF+E +NLVFMQYN+ + G L PL ++NIDTG+GLERIA ++Q +N
Sbjct: 198 GKLDCAIGCDCDRFLEIWNLVFMQYNRDESGMLTPLPKQNIDTGMGLERIASVMQGAASN 257
Query: 284 YETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYV 343
++TDL PII K SEL+ V Y SND++++ +K++ DH RA+ ++LSDG+ P + GRGYV
Sbjct: 258 FDTDLFLPIINKVSELSGVPY-HSNDKSDVAMKVVADHTRAVSFMLSDGIRPGSEGRGYV 316
Query: 344 VRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELK 403
+RR++RRA+R RLLGI + FL I +H ++K E IL L+
Sbjct: 317 LRRILRRAIRYARLLGI--------DKPFLEQIFVIIQRDYSHHYPELKENENFILNHLR 368
Query: 404 REELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVA 463
EE F TLE+G +L + + ++ + V LSG DAF LY+T+GFPVE+T+E+
Sbjct: 369 LEEKNFQATLEQGTLILQEKV-----KSLQEAGVTALSGADAFSLYETYGFPVELTEEML 423
Query: 464 EEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEK---IPDTEFLGYDTLSA 520
E +SVDM+GF++ E RR ++ ++ +V +SA ++EK + T F GY L+
Sbjct: 424 LEQDMSVDMEGFNLAAEEHRRLAKEQSQQMR-AVQESAAISEKAKALGTTPFRGYQELTI 482
Query: 521 KAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVE 580
K +E+L G+ V ++G +V V L +PFYAESGGQ D G + Q A +
Sbjct: 483 KTKIEALFQAGEEVKDAAEGDEVLVFLAESPFYAESGGQTSDRGMI------RTQRAEAK 536
Query: 581 VKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIG 640
+ +VKK + H + +GVL +G EVEA+VD K RQ HH+ATHLLQ+AL+ V+G
Sbjct: 537 LTEVKKGVTGTLYHHFIVTQGVLNLGDEVEALVDEKARQATARHHSATHLLQSALRTVLG 596
Query: 641 QETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKV-MALDDAKR 699
+ QAGS V +RLRFDF L EL +E L+N + ANL V M+LD AK
Sbjct: 597 EHVQQAGSFVTPERLRFDFTHFSSLTPMELTRVEDLLNEAV-LANLPVAVVEMSLDAAKA 655
Query: 700 AGAIAMFGEKYGEQVKISS 718
GA A+FGEKYG+ V++ S
Sbjct: 656 DGATALFGEKYGDTVRVVS 674
>gi|269101880|ref|ZP_06154577.1| alanyl-tRNA synthetase [Photobacterium damselae subsp. damselae CIP
102761]
gi|268161778|gb|EEZ40274.1| alanyl-tRNA synthetase [Photobacterium damselae subsp. damselae CIP
102761]
Length = 873
Score = 572 bits (1473), Expect = e-160, Method: Compositional matrix adjust.
Identities = 308/685 (44%), Positives = 442/685 (64%), Gaps = 48/685 (7%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S D IR+ +L F+ S+GH+++ S+SLVP DPT+L T AGM QFK +FLG R RA
Sbjct: 4 STDEIRRAYLAFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDVFLGLEKRSYTRAT 63
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
T+QRC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AI++AWEF T LP
Sbjct: 64 TAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKHDAIKYAWEFLTTVLELPE 123
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEI 216
+RL +++YE DDEAFEIWNKEVG+P + I R+G A DNFW G TGPCGPC+EI
Sbjct: 124 DRLLVTIYESDDEAFEIWNKEVGIPADRIVRIGDNKGAPFASDNFWQMGDTGPCGPCTEI 183
Query: 217 YYDFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERI 273
++D H D G D RFIE +N VFMQYN++ DG++EPL + ++DTG+G+ERI
Sbjct: 184 FFD-HGDHIWGGRPGTPEEDGDRFIEIWNNVFMQYNRQADGTMEPLPKPSVDTGMGIERI 242
Query: 274 ARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGV 333
A I+Q V +NYE D+ +IK A+++ + Y +D +N +L+++ DH+R+ YL++DGV
Sbjct: 243 AAIMQGVHSNYEIDIFKTLIKDAADI--IGY---DDLSNQSLRVVADHIRSCAYLIADGV 297
Query: 334 FPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKA 393
PSN GRGYV+RR+IRRAVR G LG K GAF + ++ S++K
Sbjct: 298 MPSNEGRGYVLRRIIRRAVRHGNKLGAK--------GAFFYKLVGPLADVMGTAGSELKK 349
Query: 394 REQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFG 453
+++ + + LK EE F +TL+RG +L++ L D L GS+ L G+ F LYDT+G
Sbjct: 350 QQEMVEKVLKIEEENFGRTLDRGLTILNEAL-DNL-----DGSI--LDGETVFKLYDTYG 401
Query: 454 FPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFL 513
FP ++T +VA E G ++D +GF+ ME QR Q A +A + VD + ++ + DTEF
Sbjct: 402 FPADLTNDVARERGFTIDEEGFEAAMEEQR---QRARDAGQFGVDYN-NVIKVDADTEFK 457
Query: 514 GYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTN 573
GY+ + ++ ++ +G+ V ++ G + ++L++TPFYAESGGQ GD G L
Sbjct: 458 GYEATDGEGVIVAIYRDGEEVDALAAGEEAIIVLDQTPFYAESGGQCGDTGALAAA---- 513
Query: 574 QQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQA 633
V D +K G HKGT+ EG L+VG ++ A VD R ++H+ATHL+ A
Sbjct: 514 --GVAFTVADTQK-FGHAIGHKGTLTEGALKVGDKLAATVDHVRRGAISLNHSATHLMHA 570
Query: 634 ALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMA 693
AL+K++G+ +Q GSLV D LRFDF+ + +L E+ER++N I + + T++M
Sbjct: 571 ALRKLLGEHVAQKGSLVKPDSLRFDFSHLEAVKPEQLREVERMVNDQIRLNHAIDTEIMD 630
Query: 694 LDDAKRAGAIAMFGEKYGEQVKISS 718
++ AK GA+A+FGEKY +QV++ S
Sbjct: 631 IEAAKEKGAMALFGEKYDDQVRVLS 655
>gi|343518230|ref|ZP_08755224.1| alanine--tRNA ligase [Haemophilus pittmaniae HK 85]
gi|343394026|gb|EGV06576.1| alanine--tRNA ligase [Haemophilus pittmaniae HK 85]
Length = 813
Score = 572 bits (1473), Expect = e-160, Method: Compositional matrix adjust.
Identities = 317/687 (46%), Positives = 429/687 (62%), Gaps = 62/687 (9%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVPE DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 7 IRQSFLDFFHSKGHQVVASSSLVPENDPTLLFTNAGMNQFKDVFLGMDKRPYSRATTAQR 66
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AI +AWE+ T LP +
Sbjct: 67 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAINFAWEYLTSPQWLALPKEK 126
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VY D+EA++IWNKEVGVP E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 127 LWVTVYATDNEAYDIWNKEVGVPAERIIRIGDNKGAPYASDNFWAMGDTGPCGPCTEIFY 186
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQYN+ DG++E L + ++DTG+GLERI+
Sbjct: 187 D-HGDHIWGGPPGSPEEDGDRYIEIWNVVFMQYNRLSDGTMEKLPRPSVDTGMGLERISA 245
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NYE D+ +I K +E+ + D N +L++I DH+R+ YL++DGV P
Sbjct: 246 VLQHVNSNYEIDIFQKLITKTAEIVGTT-----DLGNKSLRVIADHIRSCAYLIADGVIP 300
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN GRGYV+RR+IRRAVR G LLG K F + IE+ DVK ++
Sbjct: 301 SNEGRGYVLRRIIRRAVRHGHLLGAKE--------TFFYKLVPTLIEVMDSAGIDVKNKQ 352
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
+ + LK+EE +F +TLERG LLD ALS ++ LSG+ AF LYDT+GFP
Sbjct: 353 ATVEKLLKQEEEQFARTLERGLTLLD----GALSEVKDG----ILSGEVAFKLYDTYGFP 404
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAEKIPD 509
+++T +V E + VD GF+ EME QR+++Q+A +N V + +D +
Sbjct: 405 LDLTADVCRERNIQVDESGFEREMEAQRKRAQSASQFGMDYNTV-IRIDG---------E 454
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
TEF GY A + ++ +GK V +S G ++L TPFYAESGGQ+GD G L
Sbjct: 455 TEFEGYGKTENLAKITAIFTDGKSVDSISSGEQAVIVLENTPFYAESGGQVGDKGHL-TA 513
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
QG V D +K G VF H GT+ +G L VG+ + A+VD RQ+ ++H+ATH
Sbjct: 514 QGIK-----FNVLDTQK-YGQVFGHIGTLEQGTLSVGQTINAVVDDARRQKISLNHSATH 567
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
LL AAL++V+GQ Q GSLV LRFDF + + +L IE L+N I + T
Sbjct: 568 LLHAALRQVLGQHVVQKGSLVNDVALRFDFAHSEAISNEQLALIEDLVNSKIRANFEVDT 627
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKI 716
++M +D AK GA+A+FGEKY + V++
Sbjct: 628 ELMDIDSAKSKGAMALFGEKYADTVRV 654
>gi|307254463|ref|ZP_07536300.1| Alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 9
str. CVJ13261]
gi|307258922|ref|ZP_07540653.1| Alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 11
str. 56153]
gi|306862604|gb|EFM94561.1| Alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 9
str. CVJ13261]
gi|306866946|gb|EFM98803.1| Alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 11
str. 56153]
Length = 874
Score = 572 bits (1473), Expect = e-160, Method: Compositional matrix adjust.
Identities = 308/683 (45%), Positives = 433/683 (63%), Gaps = 54/683 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH V+PS+SLVPE DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 7 IRQSFLDFFHSKGHTVVPSSSLVPENDPTLLFTNAGMNQFKDVFLGLEKRPYTRATTAQR 66
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEM+GNFSFGDYFK +AIQ+ WE+ T GLP +
Sbjct: 67 CVRAGGKHNDLENVGYTARHHTFFEMMGNFSFGDYFKHDAIQFGWEYLTSPQWLGLPKEK 126
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
L+++VYE DDEA++IWNK VGVP +HI R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 127 LYVTVYETDDEAYDIWNKIVGVPTDHIIRIGDNKGAPYASDNFWAMGDTGPCGPCTEIFY 186
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H + G D R+IE +N+VFMQ+N+ DG++E L + ++DTG+GLER+
Sbjct: 187 D-HGETFWGGLPGSPEEDGDRYIEVWNIVFMQFNRLADGTMEKLPKPSVDTGMGLERMTA 245
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
++Q V +NYETD+ +IK+ + L NVS D N +L+++ DH+RA YL++DGV P
Sbjct: 246 VMQHVNSNYETDIFQTLIKEVAGLLNVS-----DLDNKSLRVVADHIRACSYLIADGVVP 300
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN GRGYV+RR+IRRAVR G LLG K AF + + H + ++
Sbjct: 301 SNEGRGYVLRRIIRRAVRHGNLLGAKE--------AFFYKLVPTLATVMGHAGEVLTQKQ 352
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
I + LK EE +F +TLERG LL+ DAL++ + LSG+ AF LYDT+GFP
Sbjct: 353 AHIQKTLKAEEEQFARTLERGLALLE----DALTKVENN----TLSGEVAFKLYDTYGFP 404
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGY 515
+++T +V E +++D GF+ EM QR +++A+ N D ++ + T+F+GY
Sbjct: 405 LDLTADVCRERELTIDEAGFEAEMTAQRERAKASSNFGT----DYNNVIKVEGQTDFIGY 460
Query: 516 DTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
D L A+A + L NGK V + G ++L++TPFYAE GGQ+GD G +
Sbjct: 461 DNLEAQATIVGLFSNGKAVDTIQSGESAVIILDQTPFYAEMGGQVGDSGLI--------S 512
Query: 576 TAVVE--VKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQA 633
T + V D +K G VF H G + G L +G +V A VD R +H+ATHLL +
Sbjct: 513 TGICNFAVNDTQK-YGQVFGHIGQLTSGSLSIGDKVTATVDATRRVAITANHSATHLLHS 571
Query: 634 ALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMA 693
AL++V+G +Q GSLV+ + LRFDF+ + ++LEEIER++N I + + + M
Sbjct: 572 ALREVLGDHVAQKGSLVSENILRFDFSQPEAISKSQLEEIERIVNRKIRENIQVTIETMD 631
Query: 694 LDDAKRAGAIAMFGEKYGEQVKI 716
++ AK+ GA+A+FGEKYG+ V++
Sbjct: 632 IESAKKKGAMALFGEKYGDVVRV 654
>gi|318057084|ref|ZP_07975807.1| alanyl-tRNA synthetase [Streptomyces sp. SA3_actG]
gi|318077856|ref|ZP_07985188.1| alanyl-tRNA synthetase [Streptomyces sp. SA3_actF]
gi|333028349|ref|ZP_08456413.1| putative alanyl-tRNA synthetase [Streptomyces sp. Tu6071]
gi|332748201|gb|EGJ78642.1| putative alanyl-tRNA synthetase [Streptomyces sp. Tu6071]
Length = 889
Score = 572 bits (1473), Expect = e-160, Method: Compositional matrix adjust.
Identities = 313/680 (46%), Positives = 430/680 (63%), Gaps = 33/680 (4%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQRC 112
IR+R+L F+ RGHKV+PSASL+ +DPT+LL AGM+ FKP FLG+V PRA + Q+C
Sbjct: 6 IRRRWLRFFEERGHKVVPSASLIADDPTLLLVPAGMVPFKPYFLGEVKPPAPRATSVQKC 65
Query: 113 IRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE-----FGLPANRLW 167
+RT D+E VG+T+RH TFF+M GNFSFGDYFK+ AI++AWE T FGL A RLW
Sbjct: 66 VRTPDIEEVGKTTRHGTFFQMCGNFSFGDYFKEGAIKYAWELLTSSVADGGFGLEAERLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCS 227
I+VY+DDDEA +IW VGVP E I+R+G DNFW+ G GPCGPCSEI YD P+ G
Sbjct: 126 ITVYQDDDEAEQIWRDVVGVPAERIQRLGKADNFWSMGVPGPCGPCSEINYDRGPEFGVE 185
Query: 228 DVDLGDDTRFIEFYNLVFMQYNK-----KDDGS-LEPLKQKNIDTGLGLERIARILQKVP 281
+D R++E +NLVFMQY + KDD L L +NIDTGLGLER+A ILQ V
Sbjct: 186 GGPAVNDERYVEIWNLVFMQYERGAGRGKDDFEILGDLPSQNIDTGLGLERLAMILQGVR 245
Query: 282 NNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRG 341
N YETD + +I KA+EL V+Y S ++++L+++ DH+R V L+ DGV P N GRG
Sbjct: 246 NMYETDTLRVVIDKATELTGVAYGASG-ASDVSLRVVSDHMRTSVMLIGDGVTPGNEGRG 304
Query: 342 YVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEE 401
YV+RR++RRA+R RLLG G +L + ++ ++ EL T +RI
Sbjct: 305 YVLRRIMRRAIRNMRLLGATGPVVQDLVDVVIDTMGQQYPELVTD--------RKRIETV 356
Query: 402 LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKE 461
EE F++TL+ G +LD A++ TR +GS L G AFLL+DT+GFP+++T E
Sbjct: 357 ALAEEAAFLKTLKAGTNILDT----AVTETRATGSTV-LPGDKAFLLHDTWGFPIDLTLE 411
Query: 462 VAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDD---SADLAEKIPDTEFLGYDTL 518
+A E G+SVD GF M+ QR +++A A K D ++A+ T+F GY L
Sbjct: 412 MAAEQGLSVDEDGFRRLMKEQRERAKADSQAKKTGHADLHAYREIADAAGATDFTGYVQL 471
Query: 519 SAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAV 578
+A + LLV+G P S+G +VEV+L+RTPFYAE GGQIGD G + + G AV
Sbjct: 472 EGEARIVGLLVDGVPAPAASEGDEVEVVLDRTPFYAEGGGQIGDTGRIRLDNG-----AV 526
Query: 579 VEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKV 638
VE++DV+K + V VHKG ++ G + V V A +D R+ H+ATHL AL+
Sbjct: 527 VEIRDVQKPVPGVHVHKGRVQVGEITVDAPVWAAIDQGRRRAIARAHSATHLTHQALRDA 586
Query: 639 IGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAK 698
+G +QAGS R RFDF + + ++E+ IN + +Q +VM++D+AK
Sbjct: 587 LGPTAAQAGSENQPGRFRFDFGSPAAVPTAVMTDVEQRINEVLAHEMDVQAEVMSIDEAK 646
Query: 699 RAGAIAMFGEKYGEQVKISS 718
+ GAIA FGEKYGE+V++ +
Sbjct: 647 KQGAIAEFGEKYGERVRVVT 666
>gi|293392770|ref|ZP_06637088.1| alanine-tRNA ligase [Serratia odorifera DSM 4582]
gi|291424629|gb|EFE97840.1| alanine-tRNA ligase [Serratia odorifera DSM 4582]
Length = 875
Score = 571 bits (1472), Expect = e-160, Method: Compositional matrix adjust.
Identities = 313/692 (45%), Positives = 438/692 (63%), Gaps = 72/692 (10%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRAYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AI +AWE T E F LP +
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKNDAIAYAWELLTGENWFNLPKEK 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEAF IW E+G+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYETDDEAFNIWQNEIGIPAERIIRIGDNKGAPFASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR------GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLER 272
D H D G ++ D GD R+IE +N+VFMQ+N++ DG++ PL + ++DTG+GLER
Sbjct: 188 D-HGDHIWGGPPGSAEED-GD--RYIEIWNIVFMQFNRQSDGTMLPLPKPSVDTGMGLER 243
Query: 273 IARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDG 332
IA +LQ V +NYE DL +I+ +++ + D N +L++I DH+R+ +L+SDG
Sbjct: 244 IAAVLQHVNSNYEIDLFRTLIEAVAKVTGAT-----DLDNKSLRVIADHIRSCAFLISDG 298
Query: 333 VFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVK 392
V PSN RGYV+RR+IRRAVR G +LG K F + I + ++K
Sbjct: 299 VIPSNENRGYVLRRIIRRAVRHGNMLGAKD--------TFFYKLVAPLIGVMGPAADELK 350
Query: 393 AREQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTF 452
+++ + + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+
Sbjct: 351 SQQAMVEQVLKTEEEQFARTLERGLALLDEELAKLQGDT--------LDGETAFRLYDTY 402
Query: 453 GFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQ------AAHNAVKLSVDDSADLAEK 506
GFPV++T +V E G+ VD GF+ ME QRR+++ A +N++ + VD +
Sbjct: 403 GFPVDLTADVCRERGLKVDEAGFEAAMEAQRRRARESSGFGADYNSL-IRVDGA------ 455
Query: 507 IPDTEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFL 566
+EF GYD +A + +L +G+PV ++ G + V+L+ TPFY ESGGQ+GD G L
Sbjct: 456 ---SEFCGYDHDQQQAKITALFRDGQPVDEIHAGEEAVVVLDATPFYGESGGQVGDKGIL 512
Query: 567 YVTQGTNQQTAVVE--VKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVH 624
++A E V D +K G H+G + +GVL+VG V+A++D R R +++
Sbjct: 513 --------KSAAAEFVVGDTQK-YGQAIGHQGKLAQGVLKVGDSVDALIDQVRRNRIRLN 563
Query: 625 HTATHLLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDA 684
H+ATHLL AAL++V+G+ +Q GSLV LRFDF+ + ++ +E L+N +
Sbjct: 564 HSATHLLHAALRQVLGEHVAQKGSLVNDKYLRFDFSHFEAMKPEQIRAVEDLVNQQVRRN 623
Query: 685 NLLQTKVMALDDAKRAGAIAMFGEKYGEQVKI 716
+QT+VMALDDAK GA+A+FGEKY + V++
Sbjct: 624 LPVQTEVMALDDAKEKGAMALFGEKYDDHVRV 655
>gi|315917894|ref|ZP_07914134.1| alanyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
gi|313691769|gb|EFS28604.1| alanyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
Length = 866
Score = 571 bits (1472), Expect = e-160, Method: Compositional matrix adjust.
Identities = 294/674 (43%), Positives = 433/674 (64%), Gaps = 35/674 (5%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
+G+ IR++F++F+ S+ HK SASL+P+DPT+LLT+AGM+ FKP FLG+ PR T
Sbjct: 3 TGNEIRQKFIEFFESKAHKHFESASLIPDDPTLLLTVAGMVPFKPYFLGQKEAPCPRVTT 62
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
Q+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFKKEAI W+WEF T GLP ++LW+
Sbjct: 63 YQKCIRTNDLENVGRTARHHTFFEMLGNFSFGDYFKKEAIVWSWEFVTEVLGLPKDKLWV 122
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
+V+ DDEA +IW ++ P E I RMG +N+W +G TG CGPCSEI+ D P+ G +
Sbjct: 123 TVFTTDDEAEKIWIEDCHFPRERIVRMGESENWWAAGPTGSCGPCSEIHVDLGPEYGGDE 182
Query: 229 V----DLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNY 284
D G D R+IE +NLVF ++N+ +DG LEPL +KNIDTG GLERIA ++Q NN+
Sbjct: 183 NSKIGDEGTDNRYIEIWNLVFTEWNRMEDGHLEPLPKKNIDTGAGLERIAAMVQGKSNNF 242
Query: 285 ETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVV 344
ETDL+FP++++A L N Y +S ++ + +LK+I DH RA+ +L+ DGV PSN GRGYV+
Sbjct: 243 ETDLLFPLVEEAGRLTNSKYHESPEK-DFSLKVITDHSRAVTFLIHDGVIPSNEGRGYVL 301
Query: 345 RRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKR 404
RR++RRAVR GRLLG K FL + +K ++ D+ A + I + +K
Sbjct: 302 RRILRRAVRHGRLLGQK--------ELFLYKMVKKVVDQFAIAYPDLTANLENIQKIVKI 353
Query: 405 EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAE 464
EE +F TL++G +L+++ + AL + S L G+ F +YDT+GFP E+T+E+
Sbjct: 354 EEEKFSNTLDQGIQLVNEQIEMALQAGKSS-----LDGEITFKMYDTYGFPYELTEEICN 408
Query: 465 EHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDS--ADLAEKIPDTEFLGYDTLSAKA 522
E G++V + F +ME Q+ ++++A + DS + +K TEF GY + KA
Sbjct: 409 ERGIAVSQEEFLAKMEEQKEKARSARAVIMEKGQDSFIEEFYDKHGVTEFTGYHSTEEKA 468
Query: 523 IVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVK 582
L+N I+ + + ++ ++TPFY ESGGQ+GD+G + + + +V
Sbjct: 469 ----KLLN----IRQKEDGTLLLIFDKTPFYGESGGQVGDHGSI------SSEAFQGKVL 514
Query: 583 DVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQE 642
DVKK +F H + G E G+E VD K R +HTATHLL AL++V+G
Sbjct: 515 DVKKQ-KEIFTHIVEVVSGEAEEGKEYTLTVDSKYRAAVSKNHTATHLLHKALREVLGTH 573
Query: 643 TSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGA 702
QAGSLV ++LRFDF+ + + + +++E+E +N I +A ++ +++AK GA
Sbjct: 574 VQQAGSLVDSEKLRFDFSHYEAMTEEQIQEVEERVNEKISEAIAVEVSHKTMEEAKVCGA 633
Query: 703 IAMFGEKYGEQVKI 716
+ +FG+KYG+ V++
Sbjct: 634 MMLFGDKYGDVVRV 647
>gi|395229809|ref|ZP_10408119.1| alanyl-tRNA synthetase [Citrobacter sp. A1]
gi|424730024|ref|ZP_18158622.1| alanyl-trna synthetase [Citrobacter sp. L17]
gi|394716484|gb|EJF22222.1| alanyl-tRNA synthetase [Citrobacter sp. A1]
gi|422895236|gb|EKU35025.1| alanyl-trna synthetase [Citrobacter sp. L17]
Length = 875
Score = 571 bits (1472), Expect = e-160, Method: Compositional matrix adjust.
Identities = 318/693 (45%), Positives = 438/693 (63%), Gaps = 70/693 (10%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQYAWELLTGENWFALPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYETDDEAYEIWEKEVGIPRERIIRIGDNKGAAYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR------GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLER 272
D H D G ++ D GD R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLER
Sbjct: 188 D-HGDHIWGGPPGSAEED-GD--RYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLER 243
Query: 273 IARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDG 332
IA +LQ V +NYE DL +I+ +++ + D +N +L++I DH+R+ +L++DG
Sbjct: 244 IAAVLQHVNSNYEIDLFRSLIESVAKVTGAT-----DLSNKSLRVIADHIRSCAFLIADG 298
Query: 333 VFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVK 392
V PSN RGYV+RR+IRRAVR G +LG K L G + + EL
Sbjct: 299 VVPSNENRGYVLRRIIRRAVRHGNMLGAKDTFFYKLVGPLVDVMGSAGEELK-------- 350
Query: 393 AREQRILEE-LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDT 451
R+Q ++E+ LK EE +F +TLERG LLD+ LA T L G+ AF LYDT
Sbjct: 351 -RQQAMVEQVLKTEEEQFARTLERGLALLDEELAKLSGDT--------LDGETAFRLYDT 401
Query: 452 FGFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAE 505
+GFPV++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGFGADYNAM-IRVDGA----- 455
Query: 506 KIPDTEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGF 565
+EF GY+ L V +L V+GK V ++ G D V+L++TPFYAESGGQ+GD G
Sbjct: 456 ----SEFKGYEHLELNGKVTALFVDGKAVDAINAGQDAVVVLDQTPFYAESGGQVGDKGE 511
Query: 566 LYVTQGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHH 625
L +G AV + + +++G H G + G L++G V+A VD R R +++H
Sbjct: 512 L---KGAGFAFAVSDTQKYGQAIG----HIGKLSAGSLKIGDAVQADVDEARRARIRLNH 564
Query: 626 TATHLLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDAN 685
+ATHL+ AAL++V+G +Q GSLV LRFDF+ + E+ +E L+N I
Sbjct: 565 SATHLMHAALRQVLGTHVAQKGSLVNDKLLRFDFSHTEAMKPAEIRAVEDLVNAQIRRNL 624
Query: 686 LLQTKVMALDDAKRAGAIAMFGEKYGEQVKISS 718
++T +M L+ AK GA+A+FGEKY + V++ S
Sbjct: 625 PIETNIMDLEAAKAKGAMALFGEKYDDHVRVLS 657
>gi|253574903|ref|ZP_04852243.1| alanyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str. D14]
gi|251845949|gb|EES73957.1| alanyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str. D14]
Length = 874
Score = 571 bits (1472), Expect = e-160, Method: Compositional matrix adjust.
Identities = 306/675 (45%), Positives = 439/675 (65%), Gaps = 38/675 (5%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR ++L+F+AS+GHK+ PSASLVP DP++L AGM KP F G++ + PR A SQ+
Sbjct: 6 IRSKWLEFFASKGHKIEPSASLVPHNDPSLLWINAGMAPLKPYFDGRIKPENPRLANSQK 65
Query: 112 CIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANRLWIS 169
CIRTND+ENVG+T RHHTFFEMLGNFS GDYFK+EAI WAWEF T + G +RL ++
Sbjct: 66 CIRTNDIENVGKTRRHHTFFEMLGNFSIGDYFKEEAITWAWEFLTDKKWIGFDPDRLSVT 125
Query: 170 VYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSDV 229
VY +D+EAF++WN+++G+P + I ++ +DNFW+ G GPCGPC+EI+Y DRG +
Sbjct: 126 VYPEDEEAFKLWNEKIGIPADRIIKL--EDNFWDIG-EGPCGPCTEIFY----DRGEAYG 178
Query: 230 DL--------GDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVP 281
DL G++ RF+E +NLVF Q+N DGS PL KNIDTG GLER A ILQ V
Sbjct: 179 DLSDPECYPGGENERFLEVWNLVFSQFNHNKDGSYTPLPNKNIDTGAGLERFASILQDVN 238
Query: 282 NNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRG 341
+N++TDL PII+K + LA V+Y + D +++ LK+I DH+R + + ++DGV PSN GRG
Sbjct: 239 SNFDTDLFQPIIQKTASLAGVTYGAAED-SDVALKVIADHIRTVTFAVADGVLPSNEGRG 297
Query: 342 YVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEE 401
YV+RRL+RRAVR G+L+G L+ F+ S+ E ++ DV + + I +
Sbjct: 298 YVIRRLLRRAVRYGKLIG--------LDKPFMFSLVETVGDIMGTYYPDVVIKREFIEKV 349
Query: 402 LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKE 461
++ EE RF +TL G +L + A+A ++ R ++SG DAF LYDT+GFP+++T++
Sbjct: 350 IRTEEERFHETLSDGLAILADISAEAKAQGR-----TQISGDDAFKLYDTYGFPLDLTED 404
Query: 462 VAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTLSAK 521
A EHG+SVD +GF+ ME QR +++AA + + LA+ TEF+GY+ L
Sbjct: 405 FAAEHGLSVDREGFEAAMEEQRERARAARHESGSMMVQGGVLADFTTKTEFVGYNELEVT 464
Query: 522 AIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEV 581
+ +++V+ V + +G +V+L TPFYAESGGQ+ D G ++ +A V
Sbjct: 465 TSIVAIVVDDAFVDTLGEGQSGQVILASTPFYAESGGQVSDQGTIH------NDSASATV 518
Query: 582 KDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQ 641
+ + K+ VH+ T++ G L VG EV A VD + R +HTATHLL ALK+ +G+
Sbjct: 519 EGLFKAPHGQHVHQVTVKTGELRVGAEVTASVDREQRSHTVKNHTATHLLHKALKETLGE 578
Query: 642 ETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAG 701
+QAGSLV RLRFDF+ + EL EIER +N I +A + T + +D+AK G
Sbjct: 579 HVNQAGSLVEPQRLRFDFSHLGSISPEELAEIERRVNEQIWNALPVTTSLKPIDEAKAMG 638
Query: 702 AIAMFGEKYGEQVKI 716
A+A+FGEKYG+ V++
Sbjct: 639 AMALFGEKYGDIVRV 653
>gi|157369088|ref|YP_001477077.1| alanyl-tRNA synthetase [Serratia proteamaculans 568]
gi|157320852|gb|ABV39949.1| alanyl-tRNA synthetase [Serratia proteamaculans 568]
Length = 892
Score = 571 bits (1472), Expect = e-160, Method: Compositional matrix adjust.
Identities = 315/688 (45%), Positives = 434/688 (63%), Gaps = 64/688 (9%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP+ DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 25 IRQAFLDFFHSKGHQVVASSSLVPDNDPTLLFTNAGMNQFKDVFLGLDKRAYSRATTSQR 84
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AI +AWE T E F LP R
Sbjct: 85 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAISYAWELLTGENWFNLPKER 144
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEAF+IW +++GVP E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 145 LWVTVYETDDEAFDIWQQQIGVPAERIIRIGDNKGGAFASDNFWQMGDTGPCGPCTEIFY 204
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +NLVFMQ+N++ DG++ PL + ++DTG+GLERIA
Sbjct: 205 D-HGDHIWGGPPGSPEEDGDRYIEIWNLVFMQFNRQSDGTMLPLPKPSVDTGMGLERIAA 263
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NYE DL +I +++ + D N +L++I DH+R+ +L+SDGV P
Sbjct: 264 VLQHVNSNYEIDLFSKLIAAVAKVTGAT-----DLDNKSLRVIADHIRSCAFLVSDGVTP 318
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN GRGYV+RR+IRRAVR G +LG K F + IE+ ++K R+
Sbjct: 319 SNEGRGYVLRRIIRRAVRHGNMLGAKD--------TFFYKLVAPLIEVMGPAADELK-RQ 369
Query: 396 QRILEE-LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGF 454
Q ++E+ LK EE +F +TLERG LLD+ LA+ T L G+ AF LYDT+GF
Sbjct: 370 QSLVEQVLKTEEDQFARTLERGLTLLDEELANLQGDT--------LDGETAFRLYDTYGF 421
Query: 455 PVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQ------AAHNAVKLSVDDSADLAEKIP 508
PV++T +V E G+ VD GF+ ME QRR+++ A +N++ + VD +
Sbjct: 422 PVDLTADVCRERGLKVDEAGFEQAMEAQRRRARESSGFGADYNSM-IRVDGA-------- 472
Query: 509 DTEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYV 568
++F GYD ++ V +L +G+PV ++ G + V+L+ TPFY ESGGQ+GD G L
Sbjct: 473 -SQFSGYDHEQQQSTVTALFRDGQPVNEIHAGEEAVVVLDETPFYGESGGQVGDKGVLKA 531
Query: 569 TQGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTAT 628
A EV D +K G H+G + G L+V V+A +D R R +++H+AT
Sbjct: 532 A------NADFEVSDTQK-YGQAIGHQGKLSHGSLKVNDRVDAKIDTVRRNRIRLNHSAT 584
Query: 629 HLLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQ 688
HLL AAL++ +G+ +Q GSLV LRFDF+ + ++ +E L+N I +Q
Sbjct: 585 HLLHAALRQTLGEHVAQKGSLVNDKYLRFDFSHFEAMKPEQIRTVEDLVNQQIRRNLPVQ 644
Query: 689 TKVMALDDAKRAGAIAMFGEKYGEQVKI 716
T+VMALDDAK GA+A+FGEKY + V++
Sbjct: 645 TEVMALDDAKGKGAMALFGEKYDDNVRV 672
>gi|383935935|ref|ZP_09989367.1| alanyl-tRNA synthetase [Rheinheimera nanhaiensis E407-8]
gi|383703017|dbj|GAB59458.1| alanyl-tRNA synthetase [Rheinheimera nanhaiensis E407-8]
Length = 874
Score = 571 bits (1472), Expect = e-160, Method: Compositional matrix adjust.
Identities = 315/682 (46%), Positives = 435/682 (63%), Gaps = 48/682 (7%)
Query: 52 SIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQ 110
SIR+ FLDF+AS+ H+V+PS+SL+P D T+L T AGM+QFK +FLG+ PR RA ++Q
Sbjct: 7 SIRRAFLDFFASKQHQVVPSSSLIPGNDATLLFTNAGMVQFKDVFLGQDPRSYNRAVSAQ 66
Query: 111 RCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRL 166
RC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK+ AI +AWEF T LP +L
Sbjct: 67 RCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQHAIAYAWEFLTEVVKLPKEKL 126
Query: 167 WISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYYD 219
W++VY+ DDEA+ IW +GVP E I R+G A DNFW G TGPCGPC+EI+YD
Sbjct: 127 WVTVYQTDDEAYHIWKDSIGVPAERIIRIGDNKGAPYASDNFWAMGDTGPCGPCTEIFYD 186
Query: 220 F--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARIL 277
H G D R+IE +N+VFMQ+N+ DG +E L + ++DTG+GLERIA IL
Sbjct: 187 HGAHIWGGPPGSAEEDGDRYIEIWNIVFMQFNRHSDGRMEKLPKPSVDTGMGLERIAAIL 246
Query: 278 QKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSN 337
Q V +NYE D +IK A+ + D T+ +L+++ DH+R+ +L+ DGV PSN
Sbjct: 247 QHVHSNYEIDTFVALIKAAA-----DATGATDLTDKSLRVVADHIRSCAFLIVDGVQPSN 301
Query: 338 IGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQR 397
GRGYV+RR++RRAVR G LG +G L A + + E EL A +Q
Sbjct: 302 EGRGYVLRRIVRRAVRHGNKLGARGAFFYKLVPALVAQMGEAYPEL---------AAKQA 352
Query: 398 ILEE-LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPV 456
++E+ LK EE +F +TLERG +L++ LA G+V L G+ F LYDT+GFPV
Sbjct: 353 VVEKILKLEEEQFGKTLERGLTILEEALAVL------DGTV--LPGELVFKLYDTYGFPV 404
Query: 457 EITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYD 516
++T +VA E +S+D GFD M QR+++Q A N D +A L+ TEF GY
Sbjct: 405 DLTNDVARERNLSIDQAGFDAAMAEQRKRAQQASN---FGTDYNAQLSSS-QHTEFTGYQ 460
Query: 517 TLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQT 576
A V +L G+ V + G++ ++L++TPFYAESGGQ+GD G L + G
Sbjct: 461 HEFGNATVVEILQQGQAVTTLDDGAEALLILDKTPFYAESGGQVGDTGSLTLASG----- 515
Query: 577 AVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALK 636
AV V+D K LG F HKG + +G L++G +V+A +D R K +H+ATHLL AAL+
Sbjct: 516 AVFVVEDTIK-LGKAFAHKGRL-QGTLKLGDKVDAQIDSARRAAIKQNHSATHLLHAALR 573
Query: 637 KVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDD 696
KV+G+ +Q GSLV +RLRFDF+ + +L +IE L+N I N+L T++M ++
Sbjct: 574 KVLGEHVTQKGSLVGPERLRFDFSHFEAVKADQLRQIELLVNEQIQQNNVLDTRLMPIEQ 633
Query: 697 AKRAGAIAMFGEKYGEQVKISS 718
AK AGA+A+FGEKY ++V++ S
Sbjct: 634 AKAAGAMALFGEKYDDEVRVLS 655
>gi|163746280|ref|ZP_02153638.1| alanyl-tRNA synthetase [Oceanibulbus indolifex HEL-45]
gi|161380165|gb|EDQ04576.1| alanyl-tRNA synthetase [Oceanibulbus indolifex HEL-45]
Length = 885
Score = 571 bits (1471), Expect = e-160, Method: Compositional matrix adjust.
Identities = 306/678 (45%), Positives = 431/678 (63%), Gaps = 36/678 (5%)
Query: 51 DSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATS 109
+ IR FL+++ ++GH+V+PS+ LVP DPT++ T AGM+QFK +F G R RA ++
Sbjct: 5 NEIRSTFLNYFDAQGHQVVPSSPLVPRNDPTLMFTAAGMVQFKNLFTGVETRNYSRATSA 64
Query: 110 QRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANR 165
Q+C+R ND++NVG T+RHHTFFEMLGNFSFGDYFK EAI +AW+ T EFG+ NR
Sbjct: 65 QKCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKSEAIPFAWDLLTKEFGIDPNR 124
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDR- 224
L ++VY D+EA +IW G+P E I R+ DDNFW++G TGPCGPC+EI+YD H D
Sbjct: 125 LLVTVYHTDEEAVKIWKAHTGLPDERIIRIATDDNFWSAGPTGPCGPCTEIFYD-HGDHI 183
Query: 225 --GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPN 282
G D RF+E +NLVFMQY + +DG+ EPL ++IDTG+G+ER+A +LQ +
Sbjct: 184 WGGPPGSPEEDGDRFVEIWNLVFMQYEQFEDGTREPLPNQSIDTGMGIERVAALLQGTND 243
Query: 283 NYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGY 342
NY TDL+ +I+ + A+ S + + ++I DHLR+ +L++DGV PSN GRGY
Sbjct: 244 NYATDLMRSLIEAS---AHASSTDPDGPGKTHHRVIADHLRSTSFLIADGVMPSNEGRGY 300
Query: 343 VVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEEL 402
V+RR++RRA+R LLG+K L +PS+ ++ ++ + I E L
Sbjct: 301 VLRRIMRRAMRHAHLLGVKDP----LMHQLVPSLVQQMGAAY----PELGQAQSLIRETL 352
Query: 403 KREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEV 462
EE RF QTL+RG KLLD D L E ++P G+ AF LYDTFGFP+++T++
Sbjct: 353 LLEETRFRQTLDRGLKLLD----DELHGLPEGATLP---GEAAFKLYDTFGFPLDLTQDA 405
Query: 463 AEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSA--DLAEKIPDTEFLGYDTLSA 520
E G +VD GF+ ME Q+ +++AA + D + D+A+K TEFLGYDT SA
Sbjct: 406 LREKGRAVDTDGFNTAMEAQKAKARAAWAGSGEAADATVWFDVADKSGVTEFLGYDTESA 465
Query: 521 KAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVE 580
+ + +L+ V S GSDV+V LN+TPFYAESGGQ+GD G + QT +V
Sbjct: 466 EGQIVALVQGSDKVEAASAGSDVQVALNQTPFYAESGGQVGDTGVIRT------QTGIVN 519
Query: 581 VKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIG 640
V D +KS G VFVH G + EG ++ G+ VD R + +H+ATHLL AL+ +G
Sbjct: 520 VTDTRKSAG-VFVHFGHVIEGEVKPGQSAVLEVDRARRSAIRANHSATHLLHEALRNALG 578
Query: 641 QETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRA 700
SQ GSL A DRLRFDF+ + L EL ++ER +N ++ ++T++M DDA+
Sbjct: 579 DHVSQRGSLNAHDRLRFDFSHAKGLTPEELTQVEREVNDYVRQNTPVETRIMTPDDARAM 638
Query: 701 GAIAMFGEKYGEQVKISS 718
GA A+FGEKYG++V++ S
Sbjct: 639 GAQALFGEKYGDEVRVVS 656
>gi|149190613|ref|ZP_01868882.1| alanyl-tRNA synthetase [Vibrio shilonii AK1]
gi|148835611|gb|EDL52579.1| alanyl-tRNA synthetase [Vibrio shilonii AK1]
Length = 861
Score = 571 bits (1471), Expect = e-160, Method: Compositional matrix adjust.
Identities = 316/687 (45%), Positives = 432/687 (62%), Gaps = 50/687 (7%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S D +R FL F+ S+GH+++ S+SLVP +DPT+L T AGM QFK FLG R RA
Sbjct: 4 STDEVRNAFLKFFESKGHQIVDSSSLVPHDDPTLLFTNAGMNQFKDCFLGLEKRNYTRAT 63
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
T+QRC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI +AWEF T LP
Sbjct: 64 TAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAISFAWEFLTETLKLPK 123
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG--------ADDNFWNSGATGPCGPCSE 215
+RL ++VYE DDEAFEIWNK++GVP + I R+G DNFW G TGPCGPC+E
Sbjct: 124 DRLLVTVYETDDEAFEIWNKQIGVPADRIVRIGDKKGGKPYESDNFWQMGDTGPCGPCTE 183
Query: 216 IYYDF--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERI 273
I+YD H G D RFIE +N VFMQ+N+ DG++EPL + ++DTG+G+ERI
Sbjct: 184 IFYDHGEHIWGGRPGTPEEDGDRFIEIWNNVFMQFNRHVDGTMEPLPKPSVDTGMGIERI 243
Query: 274 ARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGV 333
+ I+Q V +NYE D+ +IK A+E+ + Y D +N +L++I DH+R+ +L+ DGV
Sbjct: 244 SAIMQGVHSNYEIDVFQTLIKAAAEV--IGY---QDLSNQSLRVIADHIRSCSFLIVDGV 298
Query: 334 FPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKA 393
PSN GRGYV+RR+IRRAVR G LG +G L G + EL
Sbjct: 299 MPSNEGRGYVLRRIIRRAVRHGNKLGAQGAFFHKLVGTLASVMGSAGEELK--------- 349
Query: 394 REQRILEELKR-EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTF 452
++Q ++E++ R EE F +TLERG +L + L D L G L G+ F LYDT+
Sbjct: 350 KQQAVVEKVLRIEEENFGRTLERGMTILTEAL-DNL------GDEKVLDGETVFKLYDTY 402
Query: 453 GFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKI-PDTE 511
GFP ++T +VA E ++D +GF+ ME QR Q A A + D +A A K+ DTE
Sbjct: 403 GFPADLTNDVAREREFTIDEEGFEKAMEAQR---QRAREAGQFGTDYNA--AIKVDTDTE 457
Query: 512 FLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQG 571
F GY + V ++ V G V +S G V+L +TPFYAESGGQ GD G L G
Sbjct: 458 FCGYTGTEGSSSVAAMFVEGAEVDALSAGDKAIVVLEQTPFYAESGGQCGDAGVLKTAAG 517
Query: 572 TNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLL 631
+ +V+D +K LG+ H G + EGVL G EV+AIVD + R ++H+ATHLL
Sbjct: 518 ------LFKVEDTQK-LGNAIAHHGELVEGVLAKGDEVDAIVDAQRRAAISLNHSATHLL 570
Query: 632 QAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKV 691
AAL++V+G+ +Q GSLV D LRFDF+ + E++E+ERL+N I ++++T V
Sbjct: 571 HAALRQVLGEHVTQKGSLVKPDNLRFDFSHLEAMTKAEIKEVERLVNAQIRTNHVIETNV 630
Query: 692 MALDDAKRAGAIAMFGEKYGEQVKISS 718
M ++ AK GA+A+FGEKY ++V++ S
Sbjct: 631 MDIESAKAKGAMALFGEKYDDEVRVLS 657
>gi|317059432|ref|ZP_07923917.1| alanyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
gi|313685108|gb|EFS21943.1| alanyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
Length = 866
Score = 571 bits (1471), Expect = e-160, Method: Compositional matrix adjust.
Identities = 293/674 (43%), Positives = 433/674 (64%), Gaps = 35/674 (5%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
+G+ IR++F++F+ S+ HK SASL+P+DPT+LLT+AGM+ FKP FLG+ PR T
Sbjct: 3 TGNEIRQKFIEFFESKAHKHFESASLIPDDPTLLLTVAGMVPFKPYFLGQKEAPCPRVTT 62
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
Q+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFK+EAI W+WEF T GLP ++LW+
Sbjct: 63 YQKCIRTNDLENVGRTARHHTFFEMLGNFSFGDYFKREAIVWSWEFVTEVLGLPKDKLWV 122
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
+V+ DDEA +IW ++ P E I RMG +N+W +G TG CGPCSEI+ D P+ G +
Sbjct: 123 TVFTTDDEAEKIWIEDCHFPKERIVRMGESENWWAAGPTGSCGPCSEIHVDLGPEYGGDE 182
Query: 229 V----DLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNY 284
D G D R+IE +NLVF ++N+ +DG LEPL +KNIDTG GLERIA ++Q NN+
Sbjct: 183 NSKIGDEGTDNRYIEIWNLVFTEWNRMEDGHLEPLPKKNIDTGAGLERIAAMVQGKSNNF 242
Query: 285 ETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVV 344
ETDL+FP++++A L N Y +S ++ + +LK+I DH RA+ +L+ DGV PSN GRGYV+
Sbjct: 243 ETDLLFPLVEEAGRLTNSKYHESPEK-DFSLKVITDHSRAVTFLIHDGVIPSNEGRGYVL 301
Query: 345 RRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKR 404
RR++RRAVR GRLLG K FL + +K ++ D+ A + I + +K
Sbjct: 302 RRILRRAVRHGRLLGQK--------ELFLYKMVKKVVDQFAIAYPDLTANLENIQKIVKI 353
Query: 405 EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAE 464
EE +F TL++G +L+++ + AL + S L G+ F +YDT+GFP E+T+E+
Sbjct: 354 EEEKFSNTLDQGIQLVNEQIEMALQAGKSS-----LDGEITFKMYDTYGFPYELTEEICN 408
Query: 465 EHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDS--ADLAEKIPDTEFLGYDTLSAKA 522
E G++V + F +ME Q+ ++++A + DS + +K TEF GY + KA
Sbjct: 409 ERGIAVSQEEFLAKMEEQKEKARSARAVIMEKGQDSFIEEFYDKHGVTEFTGYHSTEEKA 468
Query: 523 IVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVK 582
L+N I+ + + ++ ++TPFY ESGGQ+GD+G + + + +V
Sbjct: 469 ----KLLN----IRQKEDGTLLLIFDKTPFYGESGGQVGDHGSI------SSEAFQGKVL 514
Query: 583 DVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQE 642
DVKK +F H + G E G+E VD K R +HTATHLL AL++V+G
Sbjct: 515 DVKKQ-KEIFTHIVEVVSGEAEEGKEYTLTVDSKYRAAVSKNHTATHLLHKALREVLGTH 573
Query: 643 TSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGA 702
QAGSLV ++LRFDF+ + + + +++E+E +N I +A ++ +++AK GA
Sbjct: 574 VQQAGSLVDSEKLRFDFSHYEAMTEEQIQEVEERVNEKISEAIAVEVSHKTMEEAKACGA 633
Query: 703 IAMFGEKYGEQVKI 716
+ +FG+KYG+ V++
Sbjct: 634 MMLFGDKYGDVVRV 647
>gi|365101551|ref|ZP_09332181.1| alanyl-tRNA synthetase [Citrobacter freundii 4_7_47CFAA]
gi|363647101|gb|EHL86330.1| alanyl-tRNA synthetase [Citrobacter freundii 4_7_47CFAA]
Length = 875
Score = 571 bits (1471), Expect = e-160, Method: Compositional matrix adjust.
Identities = 318/693 (45%), Positives = 438/693 (63%), Gaps = 70/693 (10%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQYAWELLTGENWFALPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYETDDEAYEIWEKEVGIPRERIIRIGDNKGAAYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR------GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLER 272
D H D G ++ D GD R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLER
Sbjct: 188 D-HGDHIWGGPPGSAEED-GD--RYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLER 243
Query: 273 IARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDG 332
IA +LQ V +NYE DL +I+ +++ + D +N +L++I DH+R+ +L++DG
Sbjct: 244 IAAVLQHVNSNYEIDLFRSLIESVAKVTGAT-----DLSNKSLRVIADHIRSCAFLIADG 298
Query: 333 VFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVK 392
V PSN RGYV+RR+IRRAVR G +LG K L G + + EL
Sbjct: 299 VVPSNENRGYVLRRIIRRAVRHGNMLGAKDTFFYKLVGPLVDVMGSAGEELK-------- 350
Query: 393 AREQRILEE-LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDT 451
R+Q ++E+ LK EE +F +TLERG LLD+ LA T L G+ AF LYDT
Sbjct: 351 -RQQAMVEQVLKTEEEQFARTLERGLALLDEELAKLSGDT--------LDGETAFRLYDT 401
Query: 452 FGFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAE 505
+GFPV++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGFGADYNAM-IRVDGA----- 455
Query: 506 KIPDTEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGF 565
+EF GY+ L V +L V+GK V ++ G D V+L++TPFYAESGGQ+GD G
Sbjct: 456 ----SEFKGYEHLELNGKVTALFVDGKAVDAINAGQDAVVVLDQTPFYAESGGQVGDKGE 511
Query: 566 LYVTQGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHH 625
L +G AV + + +++G H G + G L++G V+A VD R R +++H
Sbjct: 512 L---KGAGFAFAVSDTQKYGQAIG----HIGKLSAGSLKIGDAVQADVDEARRARIRLNH 564
Query: 626 TATHLLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDAN 685
+ATHL+ AAL++V+G +Q GSLV LRFDF+ + E+ +E L+N I
Sbjct: 565 SATHLMHAALRQVLGTHVAQKGSLVNDKLLRFDFSHTEAMKPAEIRAVEDLVNAQIRRNL 624
Query: 686 LLQTKVMALDDAKRAGAIAMFGEKYGEQVKISS 718
++T +M L+ AK GA+A+FGEKY + V++ S
Sbjct: 625 PIETNIMDLEAAKAKGAMALFGEKYDDHVRVLS 657
>gi|165976064|ref|YP_001651657.1| alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 3
str. JL03]
gi|205829970|sp|B0BNS8.1|SYA_ACTPJ RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|165876165|gb|ABY69213.1| alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 3
str. JL03]
Length = 874
Score = 571 bits (1471), Expect = e-160, Method: Compositional matrix adjust.
Identities = 306/681 (44%), Positives = 432/681 (63%), Gaps = 50/681 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH V+PS+SLVPE DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 7 IRQSFLDFFHSKGHTVVPSSSLVPENDPTLLFTNAGMNQFKDVFLGLEKRPYTRATTAQR 66
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEM+GNFSFGDYFK +AIQ+ WE+ T GLP +
Sbjct: 67 CVRAGGKHNDLENVGYTARHHTFFEMMGNFSFGDYFKHDAIQFGWEYLTSPQWLGLPKEK 126
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
L+++VYE DDEA++IWNK VGVP +HI R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 127 LYVTVYETDDEAYDIWNKIVGVPTDHIIRIGDNKGAPYASDNFWAMGDTGPCGPCTEIFY 186
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H + G D R+IE +N+VFMQ+N+ DG++E L + ++DTG+GLER+
Sbjct: 187 D-HGETFWGGLPGSPEEDGDRYIEVWNIVFMQFNRLADGTMEKLPKPSVDTGMGLERMTA 245
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
++Q V +NYETD+ +IK+ + L NVS D N +L+++ DH+RA YL++DGV P
Sbjct: 246 VMQHVNSNYETDIFQTLIKEVAGLLNVS-----DLDNKSLRVVADHIRACSYLIADGVVP 300
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN GRGYV+RR+IRRAVR G LLG K AF + + H + ++
Sbjct: 301 SNEGRGYVLRRIIRRAVRHGNLLGAKE--------AFFYKLVPTLATVMGHAGEVLTQKQ 352
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
I + LK EE +F +TLERG LL+ DAL++ + LSG+ AF LYDT+GFP
Sbjct: 353 AHIQKTLKAEEEQFARTLERGLALLE----DALTKVENN----TLSGEVAFKLYDTYGFP 404
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGY 515
+++T +V E +++D GF+ EM QR +++A+ N D ++ + T+F+GY
Sbjct: 405 LDLTADVCRERELTIDEAGFEAEMTAQRERAKASSNFGT----DYNNVIKVEGQTDFIGY 460
Query: 516 DTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
D L A+A + L NGK V + G ++L++TPFYAE GGQ+GD G + + +
Sbjct: 461 DNLEAQATIVGLFSNGKAVDTIQSGESAVIILDQTPFYAEMGGQVGDSGLI------STE 514
Query: 576 TAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAAL 635
V D +K G VF H G + G L +G +V A V R +H+ATHLL +AL
Sbjct: 515 ICNFTVNDTQK-YGQVFGHIGQLTSGSLSIGDKVTATVHATRRIAITANHSATHLLHSAL 573
Query: 636 KKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALD 695
++V+G +Q GSLV+ + LRFDF+ + ++LEEIER++N I + + + M ++
Sbjct: 574 REVLGDHVAQKGSLVSENILRFDFSQPEAISKSQLEEIERIVNRKIRENIQVTIETMDIE 633
Query: 696 DAKRAGAIAMFGEKYGEQVKI 716
AK+ GA+A+FGEKYG+ V++
Sbjct: 634 SAKKKGAMALFGEKYGDVVRV 654
>gi|258623803|ref|ZP_05718760.1| alanyl-tRNA synthetase [Vibrio mimicus VM603]
gi|258583926|gb|EEW08718.1| alanyl-tRNA synthetase [Vibrio mimicus VM603]
Length = 858
Score = 571 bits (1471), Expect = e-160, Method: Compositional matrix adjust.
Identities = 315/687 (45%), Positives = 433/687 (63%), Gaps = 51/687 (7%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S D +R+ FL F+ S+GH+++ S+SLVP DPT+L T AGM QFK FLG R RA
Sbjct: 2 STDEVRRAFLSFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDCFLGLEKRAYTRAT 61
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
T+QRC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AIQ+AWEF T LP
Sbjct: 62 TAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIQYAWEFLTDVLQLPK 121
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG--------ADDNFWNSGATGPCGPCSE 215
RL ++VYE DDEAF+IWNK+VG+P + I R+G DNFW G TGPCGPC+E
Sbjct: 122 ERLLVTVYETDDEAFDIWNKKVGIPADRIIRIGDKKGGKKFDSDNFWQMGDTGPCGPCTE 181
Query: 216 IYYDFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLER 272
I+YD H D G D RFIE +N VFMQ+N+ DG++EPL + ++DTG+G+ER
Sbjct: 182 IFYD-HGDHIWGGPPGSPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPSVDTGMGIER 240
Query: 273 IARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDG 332
I+ I+Q V +NYE D+ +IK A++ + Y D TN +L+++ DH+R+ +L+ DG
Sbjct: 241 ISAIMQGVHSNYEIDVFQTLIKAAADA--IGY---QDLTNQSLRVVADHIRSCAFLIVDG 295
Query: 333 VFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVK 392
V PSN GRGYV+RR+IRRAVR G L +G L G + +EL
Sbjct: 296 VMPSNEGRGYVLRRIIRRAVRHGNKLSAQGAFFHKLVGPLAEVMGTAGVELK-------- 347
Query: 393 AREQRILEELKR-EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDT 451
++Q ++E++ R EE F +TL+RG +L++ L D L SG V L G+ F LYDT
Sbjct: 348 -KQQALVEKVLRIEEENFGRTLDRGMSILNEAL-DQL-----SGQV--LDGETVFKLYDT 398
Query: 452 FGFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTE 511
+GF ++T +VA E G S+D GF+ ME QR Q A A + D +A L + +TE
Sbjct: 399 YGFLADLTNDVARERGFSIDETGFEQAMEEQR---QRAREAGQFGTDYNA-LIKSATNTE 454
Query: 512 FLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQG 571
F GY +++V + V G V +S G ++L+ TPFYAESGGQ GD G L G
Sbjct: 455 FCGYTASRGQSVVREIFVEGAEVSALSAGDKAIIVLDNTPFYAESGGQCGDTGVLKTEAG 514
Query: 572 TNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLL 631
V V+D K LG+ H G + +GVL G +V+AIVD + R ++H+ATHLL
Sbjct: 515 ------VFHVEDTHK-LGNAIAHHGVLAQGVLAKGDQVDAIVDEQRRAAISLNHSATHLL 567
Query: 632 QAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKV 691
AAL+KV+G+ +Q GSLV + LRFDF+ + TE++E+ERL+N I + ++T +
Sbjct: 568 HAALRKVLGEHVAQKGSLVRAETLRFDFSHLEAMTATEIKEVERLVNQEIRRNHSIETNI 627
Query: 692 MALDDAKRAGAIAMFGEKYGEQVKISS 718
M +D+AK GA+A+FGEKY +QV++ S
Sbjct: 628 MNIDEAKAKGAMALFGEKYDDQVRVLS 654
>gi|307261112|ref|ZP_07542790.1| Alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 12
str. 1096]
gi|306869194|gb|EFN00993.1| Alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 12
str. 1096]
Length = 874
Score = 570 bits (1470), Expect = e-160, Method: Compositional matrix adjust.
Identities = 306/681 (44%), Positives = 432/681 (63%), Gaps = 50/681 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH V+PS+SLVPE DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 7 IRQSFLDFFHSKGHTVVPSSSLVPENDPTLLFTNAGMNQFKDVFLGLEKRPYTRATTAQR 66
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEM+GNFSFGDYFK +AIQ+ WE+ T GLP +
Sbjct: 67 CVRAGGKHNDLENVGYTARHHTFFEMMGNFSFGDYFKHDAIQFGWEYLTSPQWLGLPKEK 126
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
L+++VYE DDEA++IWNK VGVP +HI R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 127 LYVTVYETDDEAYDIWNKIVGVPTDHIIRIGDNKGAPYASDNFWAMGDTGPCGPCTEIFY 186
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H + G D R+IE +N+VFMQ+N+ DG++E L + ++DTG+GLER+
Sbjct: 187 D-HGETFWGGLPGSPEEDGDRYIEVWNIVFMQFNRLADGTMEKLPKPSVDTGMGLERMTA 245
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
++Q V +NYETD+ +IK+ + L NVS D N +L+++ DH+RA YL++DGV P
Sbjct: 246 VMQHVNSNYETDIFQTLIKEVAGLLNVS-----DLDNKSLRVVADHIRACSYLIADGVVP 300
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G LLG K AF + + H + ++
Sbjct: 301 SNESRGYVLRRIIRRAVRHGNLLGAKE--------AFFYKLVPTLATVMGHAGEVLTQKQ 352
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
I + LK EE +F +TLERG LL+ DAL++ + LSG+ AF LYDT+GFP
Sbjct: 353 AHIQKTLKAEEEQFARTLERGLALLE----DALTKVENN----TLSGEVAFKLYDTYGFP 404
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGY 515
+++T +V E +++D GF+ EM QR +++A+ N D ++ + T+F+GY
Sbjct: 405 LDLTADVCRERELTIDEAGFEAEMTAQRERAKASSNFGT----DYNNVIKVEGQTDFIGY 460
Query: 516 DTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
D L A+A + L NGK V + G ++L++TPFYAE GGQ+GD G + + +
Sbjct: 461 DNLEAQATIVGLFSNGKAVDTIQSGESAVIILDQTPFYAEMGGQVGDSGLI------STE 514
Query: 576 TAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAAL 635
V D +K G VF H G + G L +G +V A VD R +H+ATHLL +AL
Sbjct: 515 ICNFAVNDTQK-YGQVFGHIGQLTSGSLSIGDKVTATVDATRRVAITANHSATHLLHSAL 573
Query: 636 KKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALD 695
++V+G +Q GSLV+ + LRFDF+ + ++LEEIER++N I + + + M ++
Sbjct: 574 REVLGDHVAQKGSLVSENILRFDFSQPEAISKSQLEEIERIVNRKIRENIQVTIETMDIE 633
Query: 696 DAKRAGAIAMFGEKYGEQVKI 716
AK+ GA+A+FGEKYG+ V++
Sbjct: 634 SAKKKGAMALFGEKYGDVVRV 654
>gi|302517973|ref|ZP_07270315.1| alanyl-tRNA synthetase [Streptomyces sp. SPB78]
gi|302426868|gb|EFK98683.1| alanyl-tRNA synthetase [Streptomyces sp. SPB78]
Length = 889
Score = 570 bits (1470), Expect = e-160, Method: Compositional matrix adjust.
Identities = 313/680 (46%), Positives = 430/680 (63%), Gaps = 33/680 (4%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQRC 112
IR+R+L F+ RGHKV+PSASL+ +DPT+LL AGM+ FKP FLG+V PRA + Q+C
Sbjct: 6 IRRRWLRFFEERGHKVVPSASLIADDPTLLLVPAGMVPFKPYFLGEVKPPAPRATSVQKC 65
Query: 113 IRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE-----FGLPANRLW 167
+RT D+E VG+T+RH TFF+M GNFSFGDYFK+ AI++AWE T FGL A RLW
Sbjct: 66 VRTPDIEEVGKTTRHGTFFQMCGNFSFGDYFKEGAIKYAWELLTSSVADGGFGLEAERLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCS 227
I+VY+DDDEA +IW VGVP E I+R+G DNFW+ G GPCGPCSEI YD P+ G
Sbjct: 126 ITVYQDDDEAEQIWRDVVGVPAERIQRLGKADNFWSMGVPGPCGPCSEINYDRGPEFGVE 185
Query: 228 DVDLGDDTRFIEFYNLVFMQYNK-----KDDGS-LEPLKQKNIDTGLGLERIARILQKVP 281
+D R++E +NLVFMQY + KDD L L +NIDTGLGLER+A ILQ V
Sbjct: 186 GGPAVNDERYVEIWNLVFMQYERGAGRGKDDFEILGDLPSQNIDTGLGLERLAMILQGVR 245
Query: 282 NNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRG 341
N YETD + +I KA+EL V+Y S ++++L+++ DH+R V L+ DGV P N GRG
Sbjct: 246 NMYETDTLRVVIDKATELTGVAYGASG-ASDVSLRVVSDHMRTSVMLIGDGVTPGNEGRG 304
Query: 342 YVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEE 401
YV+RR++RRA+R RLLG G +L + ++ ++ EL T +RI
Sbjct: 305 YVLRRIMRRAIRNMRLLGATGPVVQDLVDVVIDTMGQQYPELVTD--------RKRIETV 356
Query: 402 LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKE 461
EE F++TL+ G +LD A++ TR +GS L G AFLL+DT+GFP+++T E
Sbjct: 357 ALAEEAAFLKTLKAGTNILDT----AVTETRVTGSTV-LPGDKAFLLHDTWGFPIDLTLE 411
Query: 462 VAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDD---SADLAEKIPDTEFLGYDTL 518
+A E G+SVD GF M+ QR +++A A K D ++A+ T+F GY L
Sbjct: 412 MAAEQGLSVDEDGFRRLMKEQRERAKADSQAKKTGHADLHAYREIADAAGATDFTGYVQL 471
Query: 519 SAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAV 578
+A + LLV+G P S+G +VEV+L+RTPFYAE GGQIGD G + + G AV
Sbjct: 472 EGEARIVGLLVDGVPAPAASEGDEVEVVLDRTPFYAEGGGQIGDTGRIRLDNG-----AV 526
Query: 579 VEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKV 638
VE++DV+K + V VHKG ++ G + V V A +D R+ H+ATHL AL+
Sbjct: 527 VEIRDVQKPVPGVHVHKGRVQVGEITVDAPVWAAIDQGRRRAIARAHSATHLTHQALRDA 586
Query: 639 IGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAK 698
+G +QAGS R RFDF + + ++E+ IN + +Q +VM++D+AK
Sbjct: 587 LGPTAAQAGSENQPGRFRFDFGSPAAVPTAVMTDVEQRINEVLAHEMDVQAEVMSIDEAK 646
Query: 699 RAGAIAMFGEKYGEQVKISS 718
+ GAIA FGEKYGE+V++ +
Sbjct: 647 KQGAIAEFGEKYGERVRVVT 666
>gi|259909418|ref|YP_002649774.1| Alanyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96]
gi|387872400|ref|YP_005803782.1| protein alaS [Erwinia pyrifoliae DSM 12163]
gi|224965040|emb|CAX56571.1| Alanyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96]
gi|283479495|emb|CAY75411.1| alaS [Erwinia pyrifoliae DSM 12163]
Length = 876
Score = 570 bits (1470), Expect = e-160, Method: Compositional matrix adjust.
Identities = 307/683 (44%), Positives = 426/683 (62%), Gaps = 50/683 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG+ R RA +SQR
Sbjct: 8 IRQAFLDFFQSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGQDKRNYSRATSSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEF--STVEFGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK+EAI +AWE S+ FGLP +
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKREAIAFAWELLTSSQWFGLPKEK 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEAF+IW KE+GVP E I R+G A DNFW G TGPCGPCSEI++
Sbjct: 128 LWVTVYETDDEAFDIWEKEIGVPRERIIRIGDNKGSAYASDNFWQMGDTGPCGPCSEIFF 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++ PL + ++DTG+GLERI
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQPDGTMLPLPKPSVDTGMGLERITA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NYE DL +IK ++L + D +N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYEIDLFAQLIKSVAQLTGAT-----DLSNKSLRVIADHIRSCAFLIADGVIP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG EG F + I + D+K+++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGA--------EGTFFYKLVAPLIAVMGAAGDDLKSQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ L + S T L G+ F LYDTFGFP
Sbjct: 354 AQVEQVLKTEEEQFAKTLERGLALLDEELENLQSDT--------LDGETVFRLYDTFGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGY 515
++T +V E + +D GF+ ME QR Q A +A D + ++ +EF GY
Sbjct: 406 ADLTADVCRERNLKIDEAGFERAMEQQR---QRARDASGFGCDYN-NVIHIDQASEFKGY 461
Query: 516 DTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
L A + ++ V+G+ +S G + ++L+ TPFYAESGGQ+GD G L QG +
Sbjct: 462 QQLQLNAAITAIFVDGQAADTISAGREGVIVLDATPFYAESGGQVGDTGEL---QGNSAS 518
Query: 576 TAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAAL 635
V + +++G H G + G L VG V A VD R R +++H+ATHLL AAL
Sbjct: 519 LIVSNTQKYAQAIG----HSGKLATGELRVGERVAAQVDEARRARIRLNHSATHLLHAAL 574
Query: 636 KKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALD 695
++V+GQ SQ GSLV LRFDF+ + E+ ++E ++N I ++T +M L+
Sbjct: 575 RQVLGQHVSQKGSLVNDKYLRFDFSHFEAMTQQEIRQVEEIVNAQIRRNLPIETNIMELE 634
Query: 696 DAKRAGAIAMFGEKYGEQVKISS 718
AK GA+A+FGEKY + V++ S
Sbjct: 635 AAKAHGAMALFGEKYDDHVRVLS 657
>gi|197249925|ref|YP_002147723.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Agona str. SL483]
gi|440764321|ref|ZP_20943350.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Agona str. SH11G1113]
gi|440770300|ref|ZP_20949252.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Agona str. SH08SF124]
gi|440773002|ref|ZP_20951903.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Agona str. SH10GFN094]
gi|197213628|gb|ACH51025.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Agona str. SL483]
gi|436412130|gb|ELP10074.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Agona str. SH08SF124]
gi|436416901|gb|ELP14802.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Agona str. SH11G1113]
gi|436417367|gb|ELP15262.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Agona str. SH10GFN094]
Length = 876
Score = 570 bits (1470), Expect = e-160, Method: Compositional matrix adjust.
Identities = 313/689 (45%), Positives = 437/689 (63%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWFALPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +I+ +++ + D N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRTLIEAVAKVTGAT-----DLGNKSLRVIADHIRSCAFLVADGVLP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K F + IE+ ++K ++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAKE--------TFFYKLVGPLIEVMGSAGEELKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLQGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERKIKVDEAGFEAAMEEQRRRAREASGFGADYNAM-IRVDSA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD L V +L V+GK V ++ + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDHLELNGKVTALFVDGKAVEVINAEQEAVVVLDQTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G AV + + +++G H G + G L+VG V+A VD R R +++H+ATH
Sbjct: 513 KGAGFTFAVDDTQKYGQAIG----HIGKLSAGALKVGDAVQADVDEARRARIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G +Q GSLV+ LRFDF+ + + +E+ ++E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVAQKGSLVSDKVLRFDFSHNEAMKPSEIRQVEDLVNAQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M LD A+ GA+A+FGEKY E+V++ S
Sbjct: 629 NIMDLDAARAKGAMALFGEKYDERVRVLS 657
>gi|359298897|ref|ZP_09184736.1| alanyl-tRNA synthetase [Haemophilus [parainfluenzae] CCUG 13788]
Length = 874
Score = 570 bits (1469), Expect = e-160, Method: Compositional matrix adjust.
Identities = 304/681 (44%), Positives = 434/681 (63%), Gaps = 50/681 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH V+ S+SLVPE DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 7 IRQSFLDFFHSKGHTVVESSSLVPENDPTLLFTNAGMNQFKDVFLGNEKRPYTRATTAQR 66
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEM+GNFSFGDYFK++AI++ WE+ T GLP +
Sbjct: 67 CVRAGGKHNDLENVGYTARHHTFFEMMGNFSFGDYFKQDAIKFGWEYLTSPQWLGLPKEK 126
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
L+++VYE DDEA+ IW+ EVGVP EHI R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 127 LYVTVYETDDEAYNIWHDEVGVPAEHIIRIGDNKGAPYASDNFWAMGDTGPCGPCTEIFY 186
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D RFIE +N+VFMQ+N+ DG++E L + ++DTG+GLER+
Sbjct: 187 D-HGDHIWGGLPGSPEEDGDRFIEVWNIVFMQFNRHADGTMEKLPKPSVDTGMGLERMTA 245
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NYE D+ +IK +EL NV+ D N +L++I DH+R+ YL++DGV P
Sbjct: 246 VLQHVNSNYEIDIFQTLIKTIAELLNVT-----DLNNKSLRVIADHIRSCAYLIADGVVP 300
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN GRGYV+RR+IRRAVR G +LG KG AF + ++ H + ++
Sbjct: 301 SNEGRGYVLRRIIRRAVRHGNILGAKG--------AFFYELVPTLAKVMGHAGEIISQKQ 352
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
I + LK EE +F +TLERG LL+ LA + +LSG+ AF LYDT+GFP
Sbjct: 353 DHIQKTLKAEEEQFARTLERGLALLEDELAKVANN--------QLSGEVAFKLYDTYGFP 404
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGY 515
+++T +V E +++D KGF+ EM+ QR +++A+ N D ++ + T+F GY
Sbjct: 405 LDLTADVCRERNIAIDEKGFEAEMQAQRERAKASSNFGM----DYNNVIKVEGQTQFKGY 460
Query: 516 DTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
+TL+ A V +L NG+ V ++ G + V+L++T FY ESGGQ+GD G + + +
Sbjct: 461 ETLNTDATVVALFSNGESVNEIKSGENAVVILDQTAFYGESGGQVGDSGLI------SSE 514
Query: 576 TAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAAL 635
+V D +K G VF H G + G L+VG +V+A V+ + R ++H+ATHLL +AL
Sbjct: 515 ICNFQVNDTQK-YGQVFGHIGQLTSGSLKVGDKVKAEVEAQRRHAITLNHSATHLLHSAL 573
Query: 636 KKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALD 695
++V+G +Q GSLV LRFDF+ + +L EIER++N + + + + M ++
Sbjct: 574 REVLGNHVAQKGSLVNEQVLRFDFSQPEAINKAQLAEIERIVNRKVRENIQVLIEQMDIE 633
Query: 696 DAKRAGAIAMFGEKYGEQVKI 716
AK GA+A+FGEKYG+ V++
Sbjct: 634 SAKAKGAMALFGEKYGDVVRV 654
>gi|113969471|ref|YP_733264.1| alanyl-tRNA synthetase [Shewanella sp. MR-4]
gi|123130634|sp|Q0HL60.1|SYA_SHESM RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|113884155|gb|ABI38207.1| alanyl-tRNA synthetase [Shewanella sp. MR-4]
Length = 874
Score = 570 bits (1469), Expect = e-160, Method: Compositional matrix adjust.
Identities = 317/683 (46%), Positives = 430/683 (62%), Gaps = 54/683 (7%)
Query: 52 SIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQ 110
++R FL+F+ S GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA T+Q
Sbjct: 7 ALRSAFLEFFRSNGHQVVDSSSLVPGNDPTLLFTNAGMNQFKDVFLGMDKRSYTRATTAQ 66
Query: 111 RCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRL 166
RC+R ND++NVG T+RHHTFFEMLGNFSFGDYFK++AI++ W F T LP RL
Sbjct: 67 RCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKEDAIRFGWTFLTEVLKLPKERL 126
Query: 167 WISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYYD 219
++VY+ DDEAFEIWNK++GV E+I R+G A DNFW G TGPCGPC+EI+YD
Sbjct: 127 CVTVYQTDDEAFEIWNKKIGVAAENIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFYD 186
Query: 220 FHPD-----RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIA 274
H D R S + GD RFIE +N+VFMQYN++ G + PL + ++DTG+G+ERIA
Sbjct: 187 -HGDHIWGGRPGSPEEDGD--RFIEIWNIVFMQYNRQASGEMLPLPKPSVDTGMGIERIA 243
Query: 275 RILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVF 334
I+Q V +NYE D+ +I KA+E+ V+ D +N +L++I DH+R+ +L++DGV
Sbjct: 244 AIMQGVHSNYEIDIFRALIAKAAEIIGVT-----DLSNKSLRVIADHIRSCAFLVADGVM 298
Query: 335 PSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAR 394
PSN GRGYV+RR+IRRAVR G LG AF + IE+ +
Sbjct: 299 PSNEGRGYVLRRIIRRAVRHGNKLGATE--------AFFYKLVPTLIEVMGDAAKGLADT 350
Query: 395 EQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGF 454
+ + + LK EE +F +TLERG +LD L + T L G+ F LYDT+GF
Sbjct: 351 QVIVEKALKAEEEQFARTLERGLGILDSALNELQGDT--------LDGETVFKLYDTYGF 402
Query: 455 PVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKI-PDTEFL 513
PV++T +V E + VD GF+ M QR ++QAA N D +A L KI +T F
Sbjct: 403 PVDLTADVCRERNIIVDEAGFEAAMAEQRSRAQAAGN---FGADYNAAL--KIDAETAFC 457
Query: 514 GYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTN 573
GY L+ A V +L +NG+ V ++ G D V+L+ TPFYAESGGQ+GD G L V QG
Sbjct: 458 GYSELTGNAKVTALYLNGESVPAINAGDDAVVVLDVTPFYAESGGQVGDKGVL-VAQGIE 516
Query: 574 QQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQA 633
V D +K G HKGT+ G L VG+ +EA VD KLR R +++H+ THLL A
Sbjct: 517 -----FAVSDTQK-FGQASGHKGTLTAGSLSVGQVLEAKVDKKLRHRTQLNHSVTHLLHA 570
Query: 634 ALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMA 693
AL++V+G +Q GSLV +RLRFDF+ + EL+++E L+N I + L+ MA
Sbjct: 571 ALRQVLGTHVTQKGSLVDPERLRFDFSHFEAVKPAELKQVEELVNTQIRRNHELKVAEMA 630
Query: 694 LDDAKRAGAIAMFGEKYGEQVKI 716
+D+AK GA+A+FGEKY QV++
Sbjct: 631 IDEAKEKGAMALFGEKYDAQVRV 653
>gi|444426191|ref|ZP_21221615.1| alanyl-tRNA ligase [Vibrio campbellii CAIM 519 = NBRC 15631]
gi|444240604|gb|ELU52142.1| alanyl-tRNA ligase [Vibrio campbellii CAIM 519 = NBRC 15631]
Length = 865
Score = 570 bits (1469), Expect = e-160, Method: Compositional matrix adjust.
Identities = 314/687 (45%), Positives = 436/687 (63%), Gaps = 46/687 (6%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S D +R FL F+ S+GH+++ S+SLVP DPT+L T AGM QFK FLG R RA
Sbjct: 4 STDEVRNAFLKFFESKGHQIVESSSLVPHNDPTLLFTNAGMNQFKDCFLGLEKRAYTRAT 63
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
T+QRC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI + WEF T LPA
Sbjct: 64 TAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIAFVWEFLTETLKLPA 123
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG--------ADDNFWNSGATGPCGPCSE 215
+RL ++VYE DDEAF+IWNK+VGVP + I R+G DNFW G TGPCGPC+E
Sbjct: 124 DRLLVTVYETDDEAFDIWNKKVGVPADRIIRIGDKKGGKPFESDNFWQMGDTGPCGPCTE 183
Query: 216 IYYDF--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERI 273
I+YD H G D RFIE +N VFMQ+N++ DG++EPL + ++DTG+G+ERI
Sbjct: 184 IFYDHGEHIWGGRPGTPEEDGDRFIEIWNNVFMQFNRQADGTMEPLPKPSVDTGMGIERI 243
Query: 274 ARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGV 333
+ I+Q V +NYE D+ +IK A+E+ + Y D +N +L++I DH+R+ +L+ DGV
Sbjct: 244 SAIMQGVHSNYEIDVFQALIKAAAEV--IGY---EDLSNQSLRVIADHIRSCSFLIVDGV 298
Query: 334 FPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKA 393
PSN GRGYV+RR+IRRAVR G LG +GAF + E+ ++K
Sbjct: 299 MPSNEGRGYVLRRIIRRAVRHGNKLG--------AQGAFFHKLVGVLAEIMGTAGEELK- 349
Query: 394 REQRILEELKR-EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTF 452
R+Q ++E++ R EE F +TLERG +L++ L D +S G V L G+ F LYDT+
Sbjct: 350 RQQAVVEKVLRIEEENFGRTLERGMAILNEAL-DNISSQGTDGKV--LDGETVFKLYDTY 406
Query: 453 GFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKI-PDTE 511
GFP ++T +VA E ++D +GF+ ME QR++++ A N D +A A K+ TE
Sbjct: 407 GFPADLTNDVAREREFAIDEEGFEKAMEEQRQRAREAGN---FGTDYNA--AIKVDTQTE 461
Query: 512 FLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQG 571
F GY + V ++ V G V +S G ++L TPFYAESGGQ GD G + G
Sbjct: 462 FCGYTGTKGSSSVAAMFVEGNEVESLSAGDKAIIVLGETPFYAESGGQCGDAGEIRTESG 521
Query: 572 TNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLL 631
V V+D +K LG+ H G + EGVL G EV IVD + R ++H+ATHLL
Sbjct: 522 ------VFRVEDTQK-LGNAIAHHGVMAEGVLAKGDEVATIVDAERRAAISLNHSATHLL 574
Query: 632 QAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKV 691
AAL++++G+ +Q GSLV D LRFDF+ + EL+E+ERL+N I ++++T V
Sbjct: 575 HAALRQLLGEHVTQKGSLVKADGLRFDFSHLEAVTAAELKEVERLVNAQIRRNHVIETNV 634
Query: 692 MALDDAKRAGAIAMFGEKYGEQVKISS 718
M ++ AK+ GA+A+FGEKY ++V++ S
Sbjct: 635 MDIESAKKKGAMALFGEKYDDEVRVLS 661
>gi|283835574|ref|ZP_06355315.1| alanine--tRNA ligase [Citrobacter youngae ATCC 29220]
gi|291068784|gb|EFE06893.1| alanine--tRNA ligase [Citrobacter youngae ATCC 29220]
Length = 875
Score = 570 bits (1469), Expect = e-160, Method: Compositional matrix adjust.
Identities = 318/693 (45%), Positives = 439/693 (63%), Gaps = 70/693 (10%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWFALPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYETDDEAYEIWEKEVGIPRERIIRIGDNKGAAYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR------GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLER 272
D H D G ++ D GD R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLER
Sbjct: 188 D-HGDHIWGGPPGSAEED-GD--RYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLER 243
Query: 273 IARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDG 332
IA +LQ V +NYE DL +I+ +++ + D +N +L++I DH+R+ +L++DG
Sbjct: 244 IAAVLQHVNSNYEIDLFRSLIESVAKVTGAT-----DLSNKSLRVIADHIRSCAFLIADG 298
Query: 333 VFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVK 392
V PSN RGYV+RR+IRRAVR G +LG K L G + + EL
Sbjct: 299 VVPSNENRGYVLRRIIRRAVRHGNMLGAKDTFFYKLVGPLVEVMGSAGDELK-------- 350
Query: 393 AREQRILEE-LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDT 451
R+Q ++E+ LK EE +F +TLERG LLD+ LA T L G+ AF LYDT
Sbjct: 351 -RQQAMVEQVLKTEEEQFARTLERGLALLDEELAKLSGDT--------LDGETAFRLYDT 401
Query: 452 FGFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAE 505
+GFPV++T +V E + VD +GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 402 YGFPVDLTADVCRERNIKVDEEGFEAAMEEQRRRAREASGFGADYNAM-IRVDGA----- 455
Query: 506 KIPDTEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGF 565
+EF GY+ L V +L V+GK V ++ G D V+L++TPFYAESGGQ+GD G
Sbjct: 456 ----SEFKGYEHLELNGKVTALFVDGKAVDAINAGQDAVVVLDQTPFYAESGGQVGDKGE 511
Query: 566 LYVTQGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHH 625
L +G AV + + +++G H G + G L++G V+A VD R R +++H
Sbjct: 512 L---KGAGFAFAVSDTQKYGQAIG----HIGKLSAGSLKIGDAVQADVDEARRARIRLNH 564
Query: 626 TATHLLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDAN 685
+ATHL+ AAL++V+G +Q GSLV LRFDF+ + E+ +E L+N I
Sbjct: 565 SATHLMHAALRQVLGTHVAQKGSLVNDKVLRFDFSHTEAMKPAEIRAVEDLVNAQIRRNL 624
Query: 686 LLQTKVMALDDAKRAGAIAMFGEKYGEQVKISS 718
++T +M L+ AK GA+A+FGEKY + V++ S
Sbjct: 625 PIETNIMDLEAAKAKGAMALFGEKYDDHVRVLS 657
>gi|239617978|ref|YP_002941300.1| alanyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1]
gi|239506809|gb|ACR80296.1| alanyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1]
Length = 873
Score = 570 bits (1469), Expect = e-160, Method: Compositional matrix adjust.
Identities = 296/677 (43%), Positives = 425/677 (62%), Gaps = 32/677 (4%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
+G IR+ FL F+ S+ H +LPSASL+P DP ++ T+AGM+ FKPIF GK+ PR AT
Sbjct: 5 TGHEIRESFLKFFESKKHTILPSASLIPNDPQLMFTVAGMVPFKPIFWGKIEPTYPRVAT 64
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
Q+C+RT D++NVGRT RHHTFFEMLGNFSFGDYFKKEAI+WAWE+ T +P ++LW+
Sbjct: 65 CQKCVRTVDIDNVGRTPRHHTFFEMLGNFSFGDYFKKEAIEWAWEYITEVLKIPEDKLWV 124
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWN-SGATGPCGPCSEIYYDFHPDRGCS 227
SVY DDDEA+EIW VG+ + I R+G DDN+W +G TGPCGP SEI+ D + C
Sbjct: 125 SVYHDDDEAYEIWRNNVGISEKRIVRLGKDDNWWGPAGPTGPCGPSSEIFVDTGRTKDCP 184
Query: 228 DVD----LGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNN 283
DV+ D RF+EF+NLVF +YN DG+L LK+KNIDTGLGLER+A I+Q V +N
Sbjct: 185 DVENCSPACDCGRFLEFWNLVFTEYNMDGDGNLTRLKKKNIDTGLGLERMAAIMQGVSSN 244
Query: 284 YETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYV 343
+ETD+ PI+++ L NV Y S D++++++++I DH RAI +L++DGV PSN GRGYV
Sbjct: 245 FETDMFKPIVERIEGLLNVKYGVS-DKSDVSIRVIADHSRAITFLITDGVLPSNEGRGYV 303
Query: 344 VRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELK 403
+RR++RRA+R G LLG FL I E + + ++K + + E
Sbjct: 304 LRRIMRRAIRHGSLLGSS--------KPFLYKIPEVVVVTLGDVYPEIKEKLSLVEEITL 355
Query: 404 REELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVA 463
+EE RF+ T E G K L Q++ RL G+D FLL+DT+GF +E+ +E+
Sbjct: 356 KEEERFLTTFESGTKRLWQIVEKK----------NRLDGEDLFLLHDTYGFHLELVEEIV 405
Query: 464 EEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDS--ADLAEKIPDTEFLGYDTLSAK 521
E + +D +GF ME QR +++ A V+ D S E I T+F+GY+ L+ K
Sbjct: 406 AEKNLPLDKEGFKALMEQQRERARKAAGNVEYEKDSSRYRKAYEIIGGTKFVGYEKLTVK 465
Query: 522 AIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEV 581
+ +L + K ++SKG E++ + TPFY E GGQ+ D G + +G EV
Sbjct: 466 TKIAHILKDEKITEELSKGEKGELIFDITPFYPEKGGQVADRGIIKTAEG------FAEV 519
Query: 582 KDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQ 641
+ V + VH+ ++ G ++ G IVD + R+ +HTATHLL AAL+K++G+
Sbjct: 520 EHVFIPFQDLIVHRVLVKSGKIKSGDLATLIVDKENRRSTARNHTATHLLHAALRKILGE 579
Query: 642 ETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAG 701
QAGSLV +RLRFDF+ + L E+++IE L+N I +A + + ++ K
Sbjct: 580 HVKQAGSLVEAERLRFDFSHYTALDKEEIQKIEELVNRKILEAIPVDVAEKSFEEVKNED 639
Query: 702 AIAMFGEKYGEQVKISS 718
+A+F EKYG++V++ S
Sbjct: 640 VVALFQEKYGDRVRVVS 656
>gi|205830246|sp|A8GA09.2|SYA_SERP5 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
Length = 875
Score = 570 bits (1469), Expect = e-160, Method: Compositional matrix adjust.
Identities = 315/688 (45%), Positives = 434/688 (63%), Gaps = 64/688 (9%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP+ DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPDNDPTLLFTNAGMNQFKDVFLGLDKRAYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AI +AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAISYAWELLTGENWFNLPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEAF+IW +++GVP E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYETDDEAFDIWQQQIGVPAERIIRIGDNKGGAFASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +NLVFMQ+N++ DG++ PL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNLVFMQFNRQSDGTMLPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NYE DL +I +++ + D N +L++I DH+R+ +L+SDGV P
Sbjct: 247 VLQHVNSNYEIDLFSKLIAAVAKVTGAT-----DLDNKSLRVIADHIRSCAFLVSDGVTP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN GRGYV+RR+IRRAVR G +LG K F + IE+ ++K R+
Sbjct: 302 SNEGRGYVLRRIIRRAVRHGNMLGAKD--------TFFYKLVAPLIEVMGPAADELK-RQ 352
Query: 396 QRILEE-LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGF 454
Q ++E+ LK EE +F +TLERG LLD+ LA+ T L G+ AF LYDT+GF
Sbjct: 353 QSLVEQVLKTEEDQFARTLERGLTLLDEELANLQGDT--------LDGETAFRLYDTYGF 404
Query: 455 PVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQ------AAHNAVKLSVDDSADLAEKIP 508
PV++T +V E G+ VD GF+ ME QRR+++ A +N++ + VD +
Sbjct: 405 PVDLTADVCRERGLKVDEAGFEQAMEAQRRRARESSGFGADYNSM-IRVDGA-------- 455
Query: 509 DTEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYV 568
++F GYD ++ V +L +G+PV ++ G + V+L+ TPFY ESGGQ+GD G L
Sbjct: 456 -SQFSGYDHEQQQSTVTALFRDGQPVNEIHAGEEAVVVLDETPFYGESGGQVGDKGVLKA 514
Query: 569 TQGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTAT 628
A EV D +K G H+G + G L+V V+A +D R R +++H+AT
Sbjct: 515 A------NADFEVSDTQK-YGQAIGHQGKLSHGSLKVNDRVDAKIDTVRRNRIRLNHSAT 567
Query: 629 HLLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQ 688
HLL AAL++ +G+ +Q GSLV LRFDF+ + ++ +E L+N I +Q
Sbjct: 568 HLLHAALRQTLGEHVAQKGSLVNDKYLRFDFSHFEAMKPEQIRTVEDLVNQQIRRNLPVQ 627
Query: 689 TKVMALDDAKRAGAIAMFGEKYGEQVKI 716
T+VMALDDAK GA+A+FGEKY + V++
Sbjct: 628 TEVMALDDAKGKGAMALFGEKYDDNVRV 655
>gi|114046704|ref|YP_737254.1| alanyl-tRNA synthetase [Shewanella sp. MR-7]
gi|123030800|sp|Q0HXF8.1|SYA_SHESR RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|113888146|gb|ABI42197.1| alanyl-tRNA synthetase [Shewanella sp. MR-7]
Length = 874
Score = 570 bits (1469), Expect = e-159, Method: Compositional matrix adjust.
Identities = 317/683 (46%), Positives = 430/683 (62%), Gaps = 54/683 (7%)
Query: 52 SIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQ 110
++R FL+F+ S GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA T+Q
Sbjct: 7 ALRSAFLEFFRSNGHQVVDSSSLVPGNDPTLLFTNAGMNQFKDVFLGMDKRSYTRATTAQ 66
Query: 111 RCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRL 166
RC+R ND++NVG T+RHHTFFEMLGNFSFGDYFK++AI++ W F T LP RL
Sbjct: 67 RCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKEDAIRFGWTFLTEVLKLPKERL 126
Query: 167 WISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYYD 219
++VY+ DDEAFEIWNK++GV E+I R+G A DNFW G TGPCGPC+EI+YD
Sbjct: 127 CVTVYQTDDEAFEIWNKKIGVAAENIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFYD 186
Query: 220 FHPD-----RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIA 274
H D R S + GD RFIE +N+VFMQYN++ G + PL + ++DTG+G+ERIA
Sbjct: 187 -HGDHIWGGRPGSPEEDGD--RFIEIWNIVFMQYNRQASGEMLPLPKPSVDTGMGIERIA 243
Query: 275 RILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVF 334
I+Q V +NYE D+ +I KA+E+ V+ D +N +L++I DH+R+ +L++DGV
Sbjct: 244 AIMQGVHSNYEIDIFRALIAKAAEIIGVT-----DLSNKSLRVIADHIRSCAFLVADGVM 298
Query: 335 PSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAR 394
PSN GRGYV+RR+IRRAVR G LG AF + IE+ +
Sbjct: 299 PSNEGRGYVLRRIIRRAVRHGNKLGATE--------AFFYKLVPTLIEVMGDAAKGLADT 350
Query: 395 EQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGF 454
+ + + LK EE +F +TLERG +LD L + T L G+ F LYDT+GF
Sbjct: 351 QVIVEKALKAEEEQFARTLERGLGILDSALNELQGDT--------LDGETVFKLYDTYGF 402
Query: 455 PVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKI-PDTEFL 513
PV++T +V E + VD GF+ M QR ++QAA N D +A L KI +T F
Sbjct: 403 PVDLTADVCRERNIIVDEAGFEAAMAEQRSRAQAAGN---FGADYNAAL--KIDAETAFC 457
Query: 514 GYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTN 573
GY L+ A V +L +NG+ V ++ G D V+L+ TPFYAESGGQ+GD G L V QG
Sbjct: 458 GYSELTGNAKVTALYLNGESVPAINAGDDAVVVLDVTPFYAESGGQVGDKGVL-VAQGIE 516
Query: 574 QQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQA 633
V D +K G HKGT+ G L VG+ +EA VD KLR R +++H+ THLL A
Sbjct: 517 -----FAVSDTQK-FGQASGHKGTLTAGSLSVGQVLEAKVDKKLRHRTQLNHSVTHLLHA 570
Query: 634 ALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMA 693
AL++V+G +Q GSLV +RLRFDF+ + EL+++E L+N I + L+ MA
Sbjct: 571 ALRQVLGTHVTQKGSLVDPERLRFDFSHFEAVKPAELKQVEELVNTQIRRNHELKVAEMA 630
Query: 694 LDDAKRAGAIAMFGEKYGEQVKI 716
+D+AK GA+A+FGEKY QV++
Sbjct: 631 IDEAKEKGAMALFGEKYDAQVRV 653
>gi|420374716|ref|ZP_14874664.1| alanyl-tRNA synthetase [Shigella flexneri 1235-66]
gi|391315937|gb|EIQ73437.1| alanyl-tRNA synthetase [Shigella flexneri 1235-66]
Length = 875
Score = 570 bits (1469), Expect = e-159, Method: Compositional matrix adjust.
Identities = 319/693 (46%), Positives = 438/693 (63%), Gaps = 70/693 (10%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQYAWELLTGENWFALPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYETDDEAYEIWEKEVGIPRERIIRIGDNKGAAYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR------GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLER 272
D H D G ++ D GD R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLER
Sbjct: 188 D-HGDHIWGGPPGSAEED-GD--RYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLER 243
Query: 273 IARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDG 332
IA +LQ V +NYE DL +I+ +++ + D +N +L++I DH+R+ +L++DG
Sbjct: 244 IAAVLQHVNSNYEIDLFRSLIESVAKVTGAT-----DLSNKSLRVIADHIRSCAFLIADG 298
Query: 333 VFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVK 392
V PSN RGYV+RR+IRRAVR G +LG K L G + + EL
Sbjct: 299 VVPSNENRGYVLRRIIRRAVRHGNMLGAKDTFFYKLVGPLVDVMGSAGEELK-------- 350
Query: 393 AREQRILEE-LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDT 451
R+Q ++E+ LK EE +F +TLERG LLD+ LA T L G+ AF LYDT
Sbjct: 351 -RQQAMVEQVLKTEEEQFARTLERGLALLDEELAKLSGDT--------LDGETAFRLYDT 401
Query: 452 FGFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAE 505
+GFPV++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGFGADYNAM-IRVDGA----- 455
Query: 506 KIPDTEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGF 565
+EF GY+ L V +L V+GK V ++ G D V+L++TPFYAESGGQ+GD G
Sbjct: 456 ----SEFKGYEYLELNGKVTALFVDGKAVDVINAGQDAVVVLDQTPFYAESGGQVGDKGE 511
Query: 566 LYVTQGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHH 625
L +G AV + + +++G H G + G L+VG V+A VD R R +++H
Sbjct: 512 L---KGAGFAFAVNDTQKYGQAIG----HIGKLSAGSLKVGDAVQADVDEARRARIRLNH 564
Query: 626 TATHLLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDAN 685
+ATHL+ AAL++V+G +Q GSLV LRFDF+ + E+ +E L+N I
Sbjct: 565 SATHLMHAALREVLGTHVAQKGSLVNDKVLRFDFSHTEAMKPAEIRAVEDLVNAQIRRNL 624
Query: 686 LLQTKVMALDDAKRAGAIAMFGEKYGEQVKISS 718
++T +M L+ AK GA+A+FGEKY + V++ S
Sbjct: 625 PIETNIMDLEAAKAKGAMALFGEKYDDHVRVLS 657
>gi|237729651|ref|ZP_04560132.1| alanyl-tRNA synthetase [Citrobacter sp. 30_2]
gi|226908257|gb|EEH94175.1| alanyl-tRNA synthetase [Citrobacter sp. 30_2]
Length = 875
Score = 570 bits (1469), Expect = e-159, Method: Compositional matrix adjust.
Identities = 318/693 (45%), Positives = 438/693 (63%), Gaps = 70/693 (10%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQYAWELLTGENWFALPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYETDDEAYEIWEKEVGIPRERIIRIGDNKGAAYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR------GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLER 272
D H D G ++ D GD R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLER
Sbjct: 188 D-HGDHIWGGPPGSAEED-GD--RYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLER 243
Query: 273 IARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDG 332
IA +LQ V +NYE DL +I+ +++ + D +N +L++I DH+R+ +L++DG
Sbjct: 244 IAAVLQHVNSNYEIDLFRSLIESVAKVTGAT-----DLSNKSLRVIADHIRSCAFLIADG 298
Query: 333 VFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVK 392
V PSN RGYV+RR+IRRAVR G +LG K L G + + EL
Sbjct: 299 VVPSNENRGYVLRRIIRRAVRHGNMLGAKDTFFYKLVGPLVDVMGSAGEELK-------- 350
Query: 393 AREQRILEE-LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDT 451
R+Q ++E+ LK EE +F +TLERG LLD+ LA T L G+ AF LYDT
Sbjct: 351 -RQQVMVEQVLKTEEEQFARTLERGLALLDEELAKLSGDT--------LDGETAFRLYDT 401
Query: 452 FGFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAE 505
+GFPV++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGFGADYNAM-IRVDGA----- 455
Query: 506 KIPDTEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGF 565
+EF GY+ L V +L V+GK V ++ G D V+L++TPFYAESGGQ+GD G
Sbjct: 456 ----SEFKGYEHLELNGKVTALFVDGKAVDAINAGQDAVVVLDQTPFYAESGGQVGDKGE 511
Query: 566 LYVTQGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHH 625
L +G AV + + +++G H G + G L++G V+A VD R R +++H
Sbjct: 512 L---KGAGFAFAVSDTQKYGQAIG----HIGKLSAGSLKIGDAVQADVDEARRARIRLNH 564
Query: 626 TATHLLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDAN 685
+ATHL+ AAL++V+G +Q GSLV LRFDF+ + E+ +E L+N I
Sbjct: 565 SATHLMHAALRQVLGTHVAQKGSLVNDKLLRFDFSHTEAMKPAEIRAVEDLVNAQIRRNL 624
Query: 686 LLQTKVMALDDAKRAGAIAMFGEKYGEQVKISS 718
++T +M L+ AK GA+A+FGEKY + V++ S
Sbjct: 625 PIETNIMDLEAAKAKGAMALFGEKYDDHVRVLS 657
>gi|386016887|ref|YP_005935183.1| alanyl-tRNA synthetase AlaS [Pantoea ananatis AJ13355]
gi|327394965|dbj|BAK12387.1| alanyl-tRNA synthetase AlaS [Pantoea ananatis AJ13355]
Length = 875
Score = 570 bits (1468), Expect = e-159, Method: Compositional matrix adjust.
Identities = 311/681 (45%), Positives = 427/681 (62%), Gaps = 50/681 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG+ R RA TSQR
Sbjct: 8 IRQAFLDFFNSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGQEKRDYTRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFKKEAI +AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKKEAIAFAWELLTGEQWFKLPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA++IW ++GVP E I R+G A DNFW G TGPCGPCSEI+Y
Sbjct: 128 LWVTVYETDDEAYDIWANDIGVPRERIIRIGDNKGSAYASDNFWQMGDTGPCGPCSEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++ PL + ++DTG+GLERI
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMLPLPKPSVDTGMGLERITA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NYE DL +I+ +++ + D N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYEIDLFQTLIEAVAKVTGAT-----DLNNKSLRVIADHIRSCAFLIADGVIP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K AF + I++ +++ ++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAKD--------AFFYKLVAPLIQVMGAAGEELQRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ LK EE +F +TLERG LLD+ LA S T L G+ F LYDTFGFP
Sbjct: 354 AQVENVLKSEEEQFAKTLERGLALLDEELAKLQSDT--------LDGETVFRLYDTFGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGY 515
++T +V E + +D GF+ ME QR Q A A D S ++ + F GY
Sbjct: 406 ADLTADVCRERNLKIDEAGFEKAMEQQR---QRAREASGFGADYS-NVIRIDAASSFKGY 461
Query: 516 DTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
+ L A V++L VNG+ V +S G D ++L+ TPFY ESGGQ+GD G L +G N
Sbjct: 462 EQLDLTATVKALFVNGEAVDALSAGQDAVIVLDETPFYGESGGQVGDTGEL---KGNN-- 516
Query: 576 TAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAAL 635
A+ V+D +K G H G + G L VG +EA+VD R R +++H+ATHLL AAL
Sbjct: 517 -ALFSVQDTQK-YGQAIGHIGKLSSGQLRVGDRLEAVVDEARRARIRLNHSATHLLHAAL 574
Query: 636 KKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALD 695
++V+G+ +Q GSLV LRFDF+ + E+ ++E ++N I ++T+VM L+
Sbjct: 575 RQVLGEHVAQKGSLVNDKYLRFDFSHFEAMKPQEIRQVEDIVNAQIRRNLPVETRVMDLE 634
Query: 696 DAKRAGAIAMFGEKYGEQVKI 716
AK GA+A+FGEKY +QV++
Sbjct: 635 AAKAKGAMALFGEKYDQQVRV 655
>gi|424047689|ref|ZP_17785247.1| alanine--tRNA ligase [Vibrio cholerae HENC-03]
gi|408883653|gb|EKM22432.1| alanine--tRNA ligase [Vibrio cholerae HENC-03]
Length = 860
Score = 570 bits (1468), Expect = e-159, Method: Compositional matrix adjust.
Identities = 316/687 (45%), Positives = 435/687 (63%), Gaps = 51/687 (7%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S D +R FL F+ S+GH+++ S+SLVP DPT+L T AGM QFK FLG R RA
Sbjct: 4 STDEVRNAFLKFFESKGHQIVESSSLVPHNDPTLLFTNAGMNQFKDCFLGLEKRAYTRAT 63
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
T+QRC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI +AWEF TV LPA
Sbjct: 64 TAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIAFAWEFLTVTLKLPA 123
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG--------ADDNFWNSGATGPCGPCSE 215
+RL ++VYE DDEAF+IWN++VGVP + I R+G DNFW G TGPCGPC+E
Sbjct: 124 DRLLVTVYETDDEAFDIWNQKVGVPADRIIRIGDKKGGKPYESDNFWQMGDTGPCGPCTE 183
Query: 216 IYYDF--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERI 273
I+YD H G D RFIE +N VFMQ+N+ DG++EPL + ++DTG+G+ERI
Sbjct: 184 IFYDHGEHIWGGRPGTPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPSVDTGMGIERI 243
Query: 274 ARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGV 333
+ I+Q V +NYE D+ +IK A+E+ + Y D +N +L++I DH+R+ +L+ DGV
Sbjct: 244 SAIMQGVHSNYEIDVFQALIKAAAEV--IGY---EDLSNQSLRVIADHIRSCSFLIVDGV 298
Query: 334 FPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKA 393
PSN GRGYV+RR+IRRAVR G LG +GAF + E+ ++K
Sbjct: 299 MPSNEGRGYVLRRIIRRAVRHGNKLGA--------QGAFFHKLVSVLAEIMGTAGEELK- 349
Query: 394 REQRILEELKR-EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTF 452
R+Q ++E++ R EE F +TLERG +L++ L D L G V L G+ F LYDT+
Sbjct: 350 RQQAVVEKVLRIEEENFGRTLERGMAILNEAL-DNL-----DGKV--LDGETVFKLYDTY 401
Query: 453 GFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKI-PDTE 511
GFP ++T +VA E ++D +GF+ ME QR++++ A N D +A A K+ TE
Sbjct: 402 GFPADLTNDVAREREFAIDEEGFEKAMEEQRQRAREAGN---FGTDYNA--AIKVDTQTE 456
Query: 512 FLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQG 571
F GY + V ++ V G V +S G ++L TPFYAESGGQ GD G + G
Sbjct: 457 FCGYTGTKGSSSVAAMFVEGNEVESLSAGDKAIIVLGETPFYAESGGQCGDAGEIRTEAG 516
Query: 572 TNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLL 631
V V+D +K LG+ H G + EGVL G EV IVD + R ++H+ATHLL
Sbjct: 517 ------VFRVEDTQK-LGNAIAHHGVMAEGVLAKGDEVATIVDAERRAAISLNHSATHLL 569
Query: 632 QAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKV 691
AAL++V+G+ +Q GSLV D LRFDF+ + EL+E+ERL+N I + ++T V
Sbjct: 570 HAALRQVLGEHVTQKGSLVKADSLRFDFSHLEAVTAAELKEVERLVNAQIRRNHTIETNV 629
Query: 692 MALDDAKRAGAIAMFGEKYGEQVKISS 718
M ++ AK+ GA+A+FGEKY ++V++ S
Sbjct: 630 MDIESAKKKGAMALFGEKYDDEVRVLS 656
>gi|307256675|ref|ZP_07538454.1| Alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 10
str. D13039]
gi|306864723|gb|EFM96627.1| Alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 10
str. D13039]
Length = 874
Score = 569 bits (1467), Expect = e-159, Method: Compositional matrix adjust.
Identities = 306/681 (44%), Positives = 431/681 (63%), Gaps = 50/681 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH V+PS+SLVPE DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 7 IRQSFLDFFHSKGHTVVPSSSLVPENDPTLLFTNAGMNQFKDVFLGLEKRPYTRATTAQR 66
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEM+GNFSFGDYFK +AIQ+ WE+ T GLP +
Sbjct: 67 CVRAGGKHNDLENVGYTARHHTFFEMMGNFSFGDYFKHDAIQFGWEYLTSPQWLGLPKEK 126
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
L+++VYE DDEA++IWNK VGVP +HI R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 127 LYVTVYETDDEAYDIWNKIVGVPTDHIIRIGDNKGAPYASDNFWAMGDTGPCGPCTEIFY 186
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H + G D R+IE +N+VFMQ+N+ DG++E L + ++DTG+GLER+
Sbjct: 187 D-HGETFWGGLPGSPEEDGDRYIEVWNIVFMQFNRLADGTMEKLPKPSVDTGMGLERMTA 245
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
++Q V +NYETD+ +IK+ + L NVS D N +L+++ DH+RA YL++DGV P
Sbjct: 246 VMQHVNSNYETDIFQTLIKEVAGLLNVS-----DLDNKSLRVVADHIRACSYLIADGVVP 300
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN GRGYV+RR+IRRAVR G LLG K AF + + H + ++
Sbjct: 301 SNEGRGYVLRRIIRRAVRHGNLLGAKE--------AFFYKLVPTLATVMGHAGEVLTQKQ 352
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
I + LK EE +F +TLERG LL+ DAL++ + LSG+ AF LYDT+GFP
Sbjct: 353 AHIQKTLKAEEEQFARTLERGLALLE----DALTKVENN----TLSGEVAFKLYDTYGFP 404
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGY 515
+++T +V E +++D GF+ EM QR +++A+ N D ++ + T+F+GY
Sbjct: 405 LDLTADVCRERELTIDEAGFEAEMTAQRERAKASSNFGT----DYNNVIKVEGQTDFIGY 460
Query: 516 DTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
D L A+A + L NGK V + G ++L++TPFYAE GGQ+GD G + + +
Sbjct: 461 DNLEAQATIVGLFSNGKAVDTIQSGESAVIILDQTPFYAEMGGQVGDSGLI------STE 514
Query: 576 TAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAAL 635
V D +K G VF H G + G L +G +V A V R +H+ATHLL +AL
Sbjct: 515 ICNFAVNDTQK-YGQVFGHIGQLTSGSLSIGDKVTATVHATRRIAITANHSATHLLHSAL 573
Query: 636 KKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALD 695
++V+G +Q GSLV+ + LRFDF+ + ++LEEIER++N I + + M ++
Sbjct: 574 REVLGDHVAQKGSLVSENILRFDFSQPEAISKSQLEEIERIVNRKIRKNIQVTIETMDIE 633
Query: 696 DAKRAGAIAMFGEKYGEQVKI 716
AK+ GA+A+FGEKYG+ V++
Sbjct: 634 SAKKKGAMALFGEKYGDVVRV 654
>gi|307249853|ref|ZP_07531828.1| Alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 4
str. M62]
gi|306858107|gb|EFM90188.1| Alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 4
str. M62]
Length = 874
Score = 569 bits (1467), Expect = e-159, Method: Compositional matrix adjust.
Identities = 305/681 (44%), Positives = 432/681 (63%), Gaps = 50/681 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH V+PS+SLVPE DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 7 IRQSFLDFFHSKGHTVVPSSSLVPENDPTLLFTNAGMNQFKDVFLGLEKRPYTRATTAQR 66
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEM+GNFSFGDYFK +AIQ+ WE+ T GLP +
Sbjct: 67 CVRAGGKHNDLENVGYTARHHTFFEMMGNFSFGDYFKHDAIQFGWEYLTSPQWLGLPKEK 126
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
L+++VYE DDEA++IWNK VGVP +HI R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 127 LYVTVYETDDEAYDIWNKIVGVPTDHIIRIGDNKGAPYASDNFWAMGDTGPCGPCTEIFY 186
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H + G D R+IE +N+VFMQ+N+ DG++E L + ++DTG+GLER+
Sbjct: 187 D-HGETFWGGLPGSPEEDGDRYIEVWNIVFMQFNRLADGTMEKLPKPSVDTGMGLERMTA 245
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
++Q V +NYETD+ +IK+ + L NV+ D N +L+++ DH+RA YL++DGV P
Sbjct: 246 VMQHVNSNYETDIFQTLIKEVAGLLNVT-----DLDNKSLRVVADHIRACSYLIADGVVP 300
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN GRGYV+RR+IRRAVR G LLG K AF + + H + ++
Sbjct: 301 SNEGRGYVLRRIIRRAVRHGNLLGAKE--------AFFYKLVPTLATVMGHAGEVLTQKQ 352
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
I + LK EE +F +TLERG LL+ DAL++ + LSG+ AF LYDT+GFP
Sbjct: 353 AHIQKTLKAEEEQFARTLERGLALLE----DALTKVENN----TLSGEVAFKLYDTYGFP 404
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGY 515
+++T +V E +++D GF+ EM QR +++A+ N D ++ + T+F+GY
Sbjct: 405 LDLTADVCRERELTIDEAGFEAEMTAQRERAKASSNFGT----DYNNVIKVEGQTDFIGY 460
Query: 516 DTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
D L A+A + L NGK V + G ++L++TPFYAE GGQ+GD G + + +
Sbjct: 461 DNLEAQATIVGLFSNGKAVDTIQSGESAVIILDQTPFYAEMGGQVGDSGLI------STE 514
Query: 576 TAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAAL 635
V D +K G VF H G + G L +G +V A V R +H+ATHLL +AL
Sbjct: 515 ICNFTVNDTQK-YGQVFGHIGQLTSGSLSIGDKVTATVHATRRIAITANHSATHLLHSAL 573
Query: 636 KKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALD 695
++V+G +Q GSLV+ + LRFDF+ + ++LEEIER++N I + + + M ++
Sbjct: 574 REVLGDHVAQKGSLVSENILRFDFSQPEAISKSQLEEIERIVNRKIRENIQVTIETMDIE 633
Query: 696 DAKRAGAIAMFGEKYGEQVKI 716
AK+ GA+A+FGEKYG+ V++
Sbjct: 634 SAKKKGAMALFGEKYGDVVRV 654
>gi|336125113|ref|YP_004567161.1| Alanyl-tRNA synthetase [Vibrio anguillarum 775]
gi|335342836|gb|AEH34119.1| Alanyl-tRNA synthetase [Vibrio anguillarum 775]
Length = 860
Score = 569 bits (1467), Expect = e-159, Method: Compositional matrix adjust.
Identities = 310/689 (44%), Positives = 437/689 (63%), Gaps = 55/689 (7%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S D +R+ FL F+ S+GH+++ S+SLVP DPT+L T AGM QFK FLG R RA
Sbjct: 4 STDEVRRAFLSFFESKGHQIVDSSSLVPANDPTLLFTNAGMNQFKDCFLGLEKRAYTRAT 63
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
T+QRC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI +AWEF TV LPA
Sbjct: 64 TAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIAYAWEFLTVTLKLPA 123
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG--------ADDNFWNSGATGPCGPCSE 215
+RL ++VYE DDEAF+IWNK+VG+P E I R+G DNFW G TGPCGPC+E
Sbjct: 124 DRLLVTVYETDDEAFDIWNKKVGIPAERIIRIGDKPGGKAYESDNFWQMGDTGPCGPCTE 183
Query: 216 IYYDFHPDR------GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLG 269
I+YD H D G ++ D GD RFIE +N VFMQ+N+ DG++EPL + ++DTG+G
Sbjct: 184 IFYD-HGDHIWGGPPGSAEED-GD--RFIEIWNNVFMQFNRHADGTMEPLPKPSVDTGMG 239
Query: 270 LERIARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLL 329
+ERI+ I+Q V +NYE D+ +IK A+E+ +D +N +L+++ DH+R+ +L+
Sbjct: 240 IERISAIMQGVHSNYEIDVFQALIKAAAEVTGY-----DDLSNQSLRVVADHIRSCAFLI 294
Query: 330 SDGVFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDS 389
DGV PSN GRGYV+RR+IRRAVR G LG +GAF + ++
Sbjct: 295 VDGVMPSNEGRGYVLRRIIRRAVRHGNKLGA--------QGAFFHKLVGPLAQVMGTAGE 346
Query: 390 DVKAREQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLY 449
++K ++ + + L+ EE F +TLERG +L+ DAL GSV L G+ F LY
Sbjct: 347 ELKKQQALVEKVLRIEEENFGRTLERGMAILN----DALDNLE--GSV--LDGETVFKLY 398
Query: 450 DTFGFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPD 509
DT+GFP ++T +VA E +++D +GF+ ME QR Q A A + D +A + + +
Sbjct: 399 DTYGFPADLTNDVARERELTIDEQGFEKAMEEQR---QRAREAGQFGTDYNA-IIKVDTN 454
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
T F GY ++ + ++ V+G V +S G ++L TPFYAESGGQ GD G +
Sbjct: 455 TAFCGYSATQGESRIAAMFVDGNEVDTLSAGDKAILILGETPFYAESGGQCGDAGVIQTA 514
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
T + +V+D +K LG+ H G + EGVL G E +AIVD K R ++H+ATH
Sbjct: 515 ------TGLFKVEDTQK-LGNAIAHHGELIEGVLAKGDEAKAIVDAKRRAAISLNHSATH 567
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
LL AAL++V+G +Q GSLV + LRFDF+ + EL+E+ERL+N I + ++T
Sbjct: 568 LLHAALRQVLGSHVAQKGSLVKAESLRFDFSHLEAMTPVELKEVERLVNAQIRRNHTIET 627
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M ++ AK GA+A+FGEKY ++V++ S
Sbjct: 628 NIMDIEAAKAKGAMALFGEKYDDEVRVLS 656
>gi|419840724|ref|ZP_14364111.1| alanine--tRNA ligase [Fusobacterium necrophorum subsp. funduliforme
ATCC 51357]
gi|386907260|gb|EIJ71974.1| alanine--tRNA ligase [Fusobacterium necrophorum subsp. funduliforme
ATCC 51357]
Length = 866
Score = 569 bits (1466), Expect = e-159, Method: Compositional matrix adjust.
Identities = 296/676 (43%), Positives = 431/676 (63%), Gaps = 39/676 (5%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
+G+ IR++F++F+ S+ HK SASL+P+DPT+LLT+AGM+ FKP FLG+ PR T
Sbjct: 3 TGNEIRQKFIEFFESKAHKHFESASLIPDDPTLLLTVAGMVPFKPYFLGQKEAPCPRVTT 62
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
Q+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFKKEAI W+WEF T GLP ++LW+
Sbjct: 63 YQKCIRTNDLENVGRTARHHTFFEMLGNFSFGDYFKKEAIVWSWEFVTEVLGLPKDKLWV 122
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
+V+ DDEA +IW +E P E I RMG +N+W +G TG CGPCSEI+ D P G +
Sbjct: 123 TVFTTDDEAEKIWIEECHFPKERIVRMGESENWWAAGPTGSCGPCSEIHVDLGPAYGGDE 182
Query: 229 V----DLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNY 284
D G D R+IE +NLVF ++N+ +DG LEPL +KNIDTG GLERIA ++Q NN+
Sbjct: 183 NSKIGDEGTDNRYIEIWNLVFTEWNRMEDGHLEPLPKKNIDTGAGLERIAAMVQGKENNF 242
Query: 285 ETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVV 344
ETDL+FP++++A L N +Y N + +LK+I DH RA+ +L+ DGV PSN GRGY++
Sbjct: 243 ETDLLFPLVEEAGRLTNSTY-HENPEKDFSLKVITDHSRAVTFLIHDGVIPSNEGRGYIL 301
Query: 345 RRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKR 404
RR++RRAVR GRLLG K FL + +K +E D+ A + I + +K
Sbjct: 302 RRILRRAVRHGRLLGQK--------ELFLYKMVKKVVEQFAVAYPDLTANMENIQKIVKI 353
Query: 405 EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAE 464
EE +F TL++G +L+++ +A AL + +L G+ F +YDT+GFP E+T+E+
Sbjct: 354 EEEKFSNTLDQGIQLVNEQIALALQAGK-----TKLDGEITFKMYDTYGFPYELTEEICH 408
Query: 465 EHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPD----TEFLGYDTLSA 520
E G++V + F +ME Q+ +++AA V DS EK D TEF GY +
Sbjct: 409 EKGIAVSQEEFLEKMEEQKEKARAARAVVMEKGQDS--FIEKFYDTHGVTEFTGYHSSQE 466
Query: 521 KAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVE 580
KA L+N ++ + + ++ ++TPFYAESGGQ+GD G ++ Q V++
Sbjct: 467 KA----KLLN----VRTREDGTLLLIFDKTPFYAESGGQVGDRGMIF---SNAFQGKVLD 515
Query: 581 VKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIG 640
VK K+ +F+H G ++ G VD K R +HTATHLL AL++V+G
Sbjct: 516 VKKQKE----IFIHVVESISGDVKEGESYSLEVDMKYRAAVSKNHTATHLLHKALREVLG 571
Query: 641 QETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRA 700
QAGSLV ++LRFDF+ + + + +++ +E +N I +A ++ ++++AK
Sbjct: 572 THVQQAGSLVDSEKLRFDFSHYEAMTEEQIKLVEERVNEKISEAIAVEISHKSMEEAKAC 631
Query: 701 GAIAMFGEKYGEQVKI 716
GA+ +FG+KYG+ V++
Sbjct: 632 GAMMLFGDKYGDTVRV 647
>gi|378765972|ref|YP_005194433.1| alanyl-tRNA synthetase [Pantoea ananatis LMG 5342]
gi|365185446|emb|CCF08396.1| Alanyl-tRNA synthetase [Pantoea ananatis LMG 5342]
Length = 875
Score = 569 bits (1466), Expect = e-159, Method: Compositional matrix adjust.
Identities = 311/681 (45%), Positives = 425/681 (62%), Gaps = 50/681 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG+ R RA TSQR
Sbjct: 8 IRQAFLDFFNSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGQEKRDYTRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFKKEAI +AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKKEAIAFAWELLTGEQWFKLPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA++IW ++GVP E I R+G A DNFW G TGPCGPCSEI+Y
Sbjct: 128 LWVTVYETDDEAYDIWANDIGVPRERIIRIGDNKGSAYASDNFWQMGDTGPCGPCSEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++ PL + ++DTG+GLERI
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMLPLPKPSVDTGMGLERITA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NYE DL +I+ +++ + D N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYEIDLFQTLIEAVAKVTGAT-----DLNNKSLRVIADHIRSCAFLIADGVIP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K AF + I++ +++ ++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAKD--------AFFYKLVAPLIQVMGAAGEELQRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ LK EE +F +TLERG LLD+ LA T L G+ F LYDTFGFP
Sbjct: 354 AQVENVLKSEEEQFAKTLERGLALLDEELAKLQGDT--------LDGETVFRLYDTFGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGY 515
++T +V E + +D GF+ ME QR Q A A D S ++ + F GY
Sbjct: 406 ADLTADVCRERNLKIDEAGFEKAMEQQR---QRAREASGFGADYS-NMIRIDAASSFKGY 461
Query: 516 DTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
+ L A V+ L VNG+ V +S G D ++L+ TPFY ESGGQ+GD G L +G N
Sbjct: 462 EQLDLTATVKGLFVNGEAVDALSAGQDAVIVLDETPFYGESGGQVGDTGEL---KGNN-- 516
Query: 576 TAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAAL 635
A+ VKD +K G H G + G L VG +EA+VD R R +++H+ATHLL AAL
Sbjct: 517 -ALFSVKDTQK-YGQAIGHIGKLSSGQLRVGDRLEAVVDEARRARIRLNHSATHLLHAAL 574
Query: 636 KKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALD 695
++V+G+ +Q GSLV LRFDF+ + E+ ++E ++N I ++T+VM L+
Sbjct: 575 RQVLGEHVAQKGSLVNDKYLRFDFSHFEAMKPQEIRQVEDIVNAQIRRNLPVETRVMDLE 634
Query: 696 DAKRAGAIAMFGEKYGEQVKI 716
AK GA+A+FGEKY +QV++
Sbjct: 635 AAKAKGAMALFGEKYDQQVRV 655
>gi|390935078|ref|YP_006392583.1| alanyl-tRNA synthetase [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
gi|389570579|gb|AFK86984.1| alanyl-tRNA synthetase [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
Length = 877
Score = 569 bits (1466), Expect = e-159, Method: Compositional matrix adjust.
Identities = 306/675 (45%), Positives = 436/675 (64%), Gaps = 35/675 (5%)
Query: 51 DSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATS 109
+ IR+++L F+ S+GH LPS SLVP+ D ++LL AGM KP F GK R T
Sbjct: 7 NEIREKYLSFFESKGHLRLPSFSLVPKNDKSLLLINAGMAPLKPYFTGKEIPPSKRVTTC 66
Query: 110 QRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWIS 169
Q+CIRT D++ VG+T+RH TFFEMLGNFSFGDYFKKEAI WAWEF T LP +RLW++
Sbjct: 67 QKCIRTPDIDRVGKTARHGTFFEMLGNFSFGDYFKKEAIPWAWEFVTKVLELPEDRLWVT 126
Query: 170 VYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSDV 229
+YE+DDEA+EIWNK VG+P E I RMG +DNFW G TGPCGPCSEIY+D D+GC
Sbjct: 127 IYENDDEAYEIWNKVVGLPPEKIVRMGKEDNFWEIG-TGPCGPCSEIYFDRGEDKGCGKP 185
Query: 230 DLG---DDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYET 286
G D RFIEF+NLVF Q++K +G+ PL + NIDTG+GLERIA I+Q+V + ++
Sbjct: 186 TCGVGCDCDRFIEFWNLVFTQFDKDAEGNYNPLPKPNIDTGMGLERIATIMQEVDSIFDV 245
Query: 287 DLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRR 346
D+I I E+A V Y + + +++L++I DH+R + +++SDG+ PSN GRGYV+RR
Sbjct: 246 DVIRGITDYVGEMAGVKYG-DDKKNDVSLRVITDHIRGVTFMISDGILPSNEGRGYVLRR 304
Query: 347 LIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREE 406
L+RRA R G+LLG L+ FL ++ + +E +++ R+ I +K+EE
Sbjct: 305 LLRRAARYGKLLG--------LDRPFLYNVVDVVVEHYKGAYPEIQERKDYIKNVIKKEE 356
Query: 407 LRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEH 466
RF +T+++G +LD+ + D + G+V L G AF LYDT+GFP+E+TKE+ E
Sbjct: 357 ERFKETIDQGLDILDEYINDLKA---SGGNV--LDGIKAFKLYDTYGFPIELTKEILNES 411
Query: 467 GVSVDMKGFDIEMENQR---RQSQAAHNAVKLSVDDSADLAEKIPD--TEFLGYDTLSAK 521
G+S+D G+ E+E QR R S+ NA+ D+ + D T+F+GYD +
Sbjct: 412 GMSIDENGYQQELEKQRLRARNSRKEDNALW-----EKDIYSTMKDIETKFIGYDVFKSD 466
Query: 522 AIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEV 581
A V +++ + + V G +V ++L+ TPFYAESGGQ+GD G + + + +
Sbjct: 467 AKVLAIIKDNEIVDSAEAGEEVNIILDTTPFYAESGGQVGDSGVI------KNEDVYINI 520
Query: 582 KDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQ 641
KD KK+ G+ F+H GT+ G+L VG VEAI+D K R +HTATHLL +AL+K IG
Sbjct: 521 KDCKKAGGNKFIHIGTVERGILNVGDTVEAIIDEKSRMSTARNHTATHLLHSALRKFIGD 580
Query: 642 ETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAG 701
QAGSLV +RLRFDF ++ L E++ IE +N I ++ + +M+ D+A + G
Sbjct: 581 HVHQAGSLVTPERLRFDFTHYQGLTSEEIKTIEDEVNKKIYESIDVSVDIMSQDEAIKKG 640
Query: 702 AIAMFGEKYGEQVKI 716
A+A+F EKYG+ V++
Sbjct: 641 AMALFQEKYGDMVRV 655
>gi|336312350|ref|ZP_08567300.1| alanyl-tRNA synthetase [Shewanella sp. HN-41]
gi|335864079|gb|EGM69193.1| alanyl-tRNA synthetase [Shewanella sp. HN-41]
Length = 874
Score = 569 bits (1466), Expect = e-159, Method: Compositional matrix adjust.
Identities = 318/683 (46%), Positives = 430/683 (62%), Gaps = 56/683 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
+R FL+F+ S GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 8 LRSAFLEFFRSHGHQVVDSSSLVPGNDPTLLFTNAGMNQFKDVFLGMDKRSYTRATTAQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
C+R ND++NVG T+RHHTFFEMLGNFSFGDYFK+EAI++ W F T LP RL
Sbjct: 68 CVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKEEAIRFGWSFLTETLKLPKERLC 127
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYYDF 220
++VY+ DDEAF+IWNK++GV E+I R+G A DNFW G TGPCGPC+EI+YD
Sbjct: 128 VTVYQTDDEAFDIWNKKIGVAAENIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFYD- 186
Query: 221 HPD-----RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
H D R S + GD RFIE +N+VFMQYN++ G + PL + ++DTG+G+ERIA
Sbjct: 187 HGDHIWGGRPGSPEEDGD--RFIEIWNIVFMQYNRQASGEMLPLPKPSVDTGMGIERIAA 244
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
I+Q V +NYE D+ +I K +E+ V+ D +N +L++I DH+R+ +L++DGV P
Sbjct: 245 IMQGVHSNYEIDIFRALIAKTAEIIGVT-----DLSNKSLRVIADHIRSCAFLVADGVMP 299
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN GRGYV+RR+IRRAVR G LG AF + IE+ + A
Sbjct: 300 SNEGRGYVLRRIIRRAVRHGNKLGATE--------AFFHKLVPTLIEVMGDAAKGL-AET 350
Query: 396 QRILEE-LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGF 454
Q I+E+ LK EE +F +TLERG +LD L + T L G+ F LYDT+GF
Sbjct: 351 QVIVEKALKAEEEQFARTLERGLGILDSALNELQGDT--------LDGETVFKLYDTYGF 402
Query: 455 PVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKI-PDTEFL 513
PV++T +V E + VD GF+ M QR ++QAA N D +A L KI +T F
Sbjct: 403 PVDLTADVCRERNIIVDEAGFEAAMAEQRSRAQAAGN---FGADYNAAL--KIDAETAFC 457
Query: 514 GYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTN 573
GY L+ A V +L VNG+ V+ ++ G + +L+ TPFYAESGGQ+GD G L
Sbjct: 458 GYSELTGNAKVTALYVNGESVLAINAGDEAVAVLDVTPFYAESGGQVGDKGVLVA----- 512
Query: 574 QQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQA 633
Q V D +K G H+G++ G L VG+ VEA VD KLR R +++H+ THLL A
Sbjct: 513 -QDIEFVVNDTQK-FGQASGHRGSLTAGSLSVGQVVEAKVDKKLRHRTQLNHSVTHLLHA 570
Query: 634 ALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMA 693
AL++V+G SQ GSLV +RLRFDF+ + EL+++E L+N I + L+T MA
Sbjct: 571 ALRQVLGTHVSQKGSLVDPERLRFDFSHFEAVKPAELKQVEELVNTQIRRNHELKTAEMA 630
Query: 694 LDDAKRAGAIAMFGEKYGEQVKI 716
+D+AK GA+A+FGEKY QV++
Sbjct: 631 IDEAKEKGAMALFGEKYDSQVRV 653
>gi|260773533|ref|ZP_05882449.1| alanyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14]
gi|260612672|gb|EEX37875.1| alanyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14]
Length = 860
Score = 569 bits (1466), Expect = e-159, Method: Compositional matrix adjust.
Identities = 309/685 (45%), Positives = 431/685 (62%), Gaps = 47/685 (6%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S D +R+ FL F+ S+GH+++ S+SLVP DPT+L T AGM QFK FLG R RA
Sbjct: 4 STDEVRRAFLSFFESKGHQIVDSSSLVPANDPTLLFTNAGMNQFKDCFLGLEKRAYTRAT 63
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
T+QRC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AIQ+AWEF T LP
Sbjct: 64 TAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIQYAWEFLTEVVKLPK 123
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG--------ADDNFWNSGATGPCGPCSE 215
RL ++VY+ DDEAF IW++++G+P + I R+G DNFW G TGPCGPC+E
Sbjct: 124 ERLLVTVYQTDDEAFNIWHQQIGIPQDRIIRIGDKPGGKAYESDNFWQMGDTGPCGPCTE 183
Query: 216 IYYDF--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERI 273
I+YD H G D RFIE +N+VFMQ+N+ DG +EPL + ++DTG+G+ERI
Sbjct: 184 IFYDHGEHIWGGPPGSAEEDGDRFIEIWNVVFMQFNRHADGKMEPLPKPSVDTGMGIERI 243
Query: 274 ARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGV 333
+ I Q V +NYE D+ +IK A+E+ + Y D N +L+++ DH+R+ +L+ DGV
Sbjct: 244 SAITQGVHSNYEIDVFQTLIKAAAEV--IGY---QDLANQSLRVVADHIRSCAFLIVDGV 298
Query: 334 FPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKA 393
PSN GRGYV+RR+IRRAVR G LG +GAF + E+ ++K
Sbjct: 299 MPSNEGRGYVLRRIIRRAVRHGNKLGA--------QGAFFHKLVAPLAEVMGSAGEELKR 350
Query: 394 REQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFG 453
+ + + L+ EE F +TLERG +L+ L DA+ GSV L G F LYDT+G
Sbjct: 351 QHALVEKVLRIEEENFGRTLERGMAILNDAL-DAVE-----GSV--LDGDTVFKLYDTYG 402
Query: 454 FPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFL 513
FP ++T +VA E G ++D +GF+ ME QR++++ A N D L + +TEF
Sbjct: 403 FPADLTNDVARERGFTIDEEGFEAAMEEQRQRARDAGNFGT----DYNSLIKVDGETEFC 458
Query: 514 GYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTN 573
GY + V +L V+G+ V +S G V+L TPFYAESGGQ GD G L G
Sbjct: 459 GYSATQKMSPVSALFVDGQEVSALSAGDKAIVVLETTPFYAESGGQCGDAGLLRTASG-- 516
Query: 574 QQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQA 633
V +V+D +K LG+ H G ++EGVL VEA+VD K R ++H+ATHLL A
Sbjct: 517 ----VFKVEDTQK-LGNAIAHYGVMQEGVLASSDHVEALVDEKRRNAISLNHSATHLLHA 571
Query: 634 ALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMA 693
AL++V+G+ +Q GSLV + LRFDF+ + E++++ERL+N I ++++T VM
Sbjct: 572 ALRQVLGEHVTQKGSLVRAENLRFDFSHLEAMTAAEIKQVERLVNAQIRLNHVIETHVMD 631
Query: 694 LDDAKRAGAIAMFGEKYGEQVKISS 718
++ AK+ GA+A+FGEKY EQV++ S
Sbjct: 632 IESAKQKGAMALFGEKYDEQVRVLS 656
>gi|333896972|ref|YP_004470846.1| alanyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum LX-11]
gi|333112237|gb|AEF17174.1| alanyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum LX-11]
Length = 877
Score = 569 bits (1466), Expect = e-159, Method: Compositional matrix adjust.
Identities = 308/675 (45%), Positives = 437/675 (64%), Gaps = 35/675 (5%)
Query: 51 DSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATS 109
+ IR+++L F+ S+GH LPS SLVP+ D ++LL AGM KP F GK R T
Sbjct: 7 NEIREKYLSFFESKGHLRLPSFSLVPKNDKSLLLINAGMAPLKPYFTGKEIPPSRRVTTC 66
Query: 110 QRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWIS 169
Q+CIRT D++ VG+T+RH TFFEMLGNFSFGDYFKKEAI WAWEF T LP +RLW++
Sbjct: 67 QKCIRTPDIDRVGKTARHGTFFEMLGNFSFGDYFKKEAIPWAWEFVTKVLELPEDRLWVT 126
Query: 170 VYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSDV 229
+YE+DDEAFEIWNK VG+P E I RMG +DNFW G TGPCGPCSEIY+D D+GC
Sbjct: 127 IYENDDEAFEIWNKVVGLPPERIVRMGKEDNFWEIG-TGPCGPCSEIYFDRGEDKGCGKP 185
Query: 230 DLG---DDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYET 286
G D RFIEF+NLVF Q++K +G+ PL + NIDTG+GLERIA I+Q+V + ++
Sbjct: 186 TCGVGCDCDRFIEFWNLVFTQFDKDAEGNYNPLPKPNIDTGMGLERIATIMQEVDSIFDV 245
Query: 287 DLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRR 346
D+I I ++A V Y ++ +++++L++I DH+R + +++SDG+ PSN GRGYV+RR
Sbjct: 246 DVIRGITDYVGKMAGVKYG-ADKKSDVSLRVITDHIRGVTFMISDGILPSNEGRGYVLRR 304
Query: 347 LIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREE 406
L+RRA R G+LLG L+ FL + + +E +++ R++ I + +K+EE
Sbjct: 305 LLRRAARYGKLLG--------LDRPFLYDVVDVVVEHYKGAYPEIQERKEYIKKVIKKEE 356
Query: 407 LRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEH 466
RF +T+++G +LD + D + + L G AF LYDT+GFP+E+TKE+ E
Sbjct: 357 ERFKETIDQGLDILDGYINDLKASGKNV-----LEGSKAFKLYDTYGFPIELTKEILSES 411
Query: 467 GVSVDMKGFDIEMENQR---RQSQAAHNAVKLSVDDSADLAEKIPD--TEFLGYDTLSAK 521
G+SVD G+ E+ENQR R S+ NA+ D+ + D T+F+GY+ +
Sbjct: 412 GMSVDEDGYQKELENQRLRARSSRKEDNALW-----EKDIYSTMKDIETKFVGYEAFKSD 466
Query: 522 AIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEV 581
A V +++ + + V G +V ++L+ TPFYAESGGQ+GD G + + + +
Sbjct: 467 AKVLAIIKDDELVNSAEAGEEVNIILDMTPFYAESGGQVGDSGII------KSEDVYINI 520
Query: 582 KDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQ 641
KD KK+ G+ FVH GTI G+L VG VEAI+D K R +HTATHLL +AL+K IG
Sbjct: 521 KDCKKAGGNKFVHIGTIERGILNVGDTVEAIIDEKNRMSTARNHTATHLLHSALRKFIGD 580
Query: 642 ETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAG 701
QAGSLV DRLRFDF ++ L E++ IE +N I ++ + +M+ D+A + G
Sbjct: 581 HVHQAGSLVTPDRLRFDFTHYQALTAYEIKMIEDEVNEKIYESIGVSIDIMSQDEAIKKG 640
Query: 702 AIAMFGEKYGEQVKI 716
A+A+F EKYG+ V++
Sbjct: 641 AMALFQEKYGDVVRV 655
>gi|295839933|ref|ZP_06826866.1| alanine-tRNA ligase [Streptomyces sp. SPB74]
gi|295827712|gb|EDY43697.2| alanine-tRNA ligase [Streptomyces sp. SPB74]
Length = 866
Score = 569 bits (1466), Expect = e-159, Method: Compositional matrix adjust.
Identities = 311/680 (45%), Positives = 431/680 (63%), Gaps = 33/680 (4%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQRC 112
IR+R+L F+ RGHKV+PSASL+ +DPT+LL AGM+ FKP FLG+V PRA + Q+C
Sbjct: 6 IRRRWLRFFEERGHKVVPSASLIADDPTLLLVPAGMVPFKPYFLGEVKPPAPRATSVQKC 65
Query: 113 IRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE-----FGLPANRLW 167
+RT D+E VG+T+RH TFF+M GNFSFGDYFK+ AI++AWE T FGL A RLW
Sbjct: 66 VRTPDIEEVGKTTRHGTFFQMCGNFSFGDYFKEGAIKYAWELLTSSVADGGFGLEAERLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCS 227
I+VY+DDDEA +IW VGVP E I+R+G DNFW+ G GPCGPCSEI YD P+ G
Sbjct: 126 ITVYQDDDEAEQIWRDVVGVPAERIQRLGKADNFWSMGVPGPCGPCSEINYDRGPEFGVE 185
Query: 228 DVDLGDDTRFIEFYNLVFMQYNK-----KDDGS-LEPLKQKNIDTGLGLERIARILQKVP 281
+D R++E +NLVFMQY + KDD L L +NIDTGLGLER+A ILQ V
Sbjct: 186 GGPAVNDERYVEIWNLVFMQYERGAGRGKDDFEILGDLPSQNIDTGLGLERLAMILQGVR 245
Query: 282 NNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRG 341
N YETD + +I KA+EL V+Y + ++++L+++ DH+R V L+ DGV P N GRG
Sbjct: 246 NMYETDTLRVVIDKATELTGVAYGAAV-ASDVSLRVVSDHMRTSVMLIGDGVTPGNEGRG 304
Query: 342 YVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEE 401
YV+RR++RRA+R RLLG G +L + ++ ++ EL T +R+
Sbjct: 305 YVLRRIMRRAIRNMRLLGATGPVVQDLVDVVIDTMGQQYPELVTD--------RKRVETV 356
Query: 402 LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKE 461
EE F++TL+ G +LD A++ TR +GS L G+ AFLL+DT+GFP+++T E
Sbjct: 357 ALAEEAAFLKTLKAGTNILDT----AVTETRATGSTV-LPGEKAFLLHDTWGFPIDLTLE 411
Query: 462 VAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDD---SADLAEKIPDTEFLGYDTL 518
+A E G+SVD GF M+ QR +++A A K D ++A+ T+F GY L
Sbjct: 412 MAAEQGLSVDEDGFRRLMKEQRERAKADSQAKKTGHADLHAYREIADAAGATDFTGYVQL 471
Query: 519 SAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAV 578
+A + LLV+G P S+G +VEV+L+RTPFYAE GGQIGD G + + G AV
Sbjct: 472 EGEARIVGLLVDGVPAPAASEGDEVEVVLDRTPFYAEGGGQIGDTGRIRLDNG-----AV 526
Query: 579 VEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKV 638
VE++DV+K + V VHKG ++ G + V V A +D R+ H+ATHL AL+
Sbjct: 527 VEIRDVQKPVPGVHVHKGRVQVGEITVDAPVWAAIDQTRRRAIARAHSATHLTHQALRDA 586
Query: 639 IGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAK 698
+G +QAGS R RFDF + + ++E+ IN + +Q +VM++D+AK
Sbjct: 587 LGPTAAQAGSENQPGRFRFDFGSPAAVPTAVMTDVEQRINEVLSREMDVQAEVMSIDEAK 646
Query: 699 RAGAIAMFGEKYGEQVKISS 718
+ GAIA FGEKYGE+V++ +
Sbjct: 647 KQGAIAEFGEKYGERVRVVT 666
>gi|269960382|ref|ZP_06174755.1| alanyl-tRNA synthetase [Vibrio harveyi 1DA3]
gi|269834809|gb|EEZ88895.1| alanyl-tRNA synthetase [Vibrio harveyi 1DA3]
Length = 860
Score = 568 bits (1465), Expect = e-159, Method: Compositional matrix adjust.
Identities = 316/687 (45%), Positives = 435/687 (63%), Gaps = 51/687 (7%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S D +R FL F+ S+GH+++ S+SLVP DPT+L T AGM QFK FLG R RA
Sbjct: 4 STDEVRNAFLKFFESKGHQIVESSSLVPHNDPTLLFTNAGMNQFKDCFLGLEKRAYTRAT 63
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
T+QRC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI +AWEF TV LPA
Sbjct: 64 TAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIAFAWEFLTVTLKLPA 123
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG--------ADDNFWNSGATGPCGPCSE 215
+RL ++VYE DDEAF+IWN++VGVP + I R+G DNFW G TGPCGPC+E
Sbjct: 124 DRLLVTVYETDDEAFDIWNQKVGVPADRIIRIGDKKGGKPYESDNFWQMGDTGPCGPCTE 183
Query: 216 IYYDF--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERI 273
I+YD H G D RFIE +N VFMQ+N+ DG++EPL + ++DTG+G+ERI
Sbjct: 184 IFYDHGEHIWGGRPGTPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPSVDTGMGIERI 243
Query: 274 ARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGV 333
+ I+Q V +NYE D+ +IK A+E+ + Y D +N +L++I DH+R+ +L+ DGV
Sbjct: 244 SAIMQGVHSNYEIDVFQALIKAAAEV--IGY---EDLSNQSLRVIADHIRSCSFLIVDGV 298
Query: 334 FPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKA 393
PSN GRGYV+RR+IRRAVR G LG +GAF + E+ ++K
Sbjct: 299 MPSNEGRGYVLRRIIRRAVRHGNKLGA--------QGAFFHKLVGVLAEIMGTAGEELK- 349
Query: 394 REQRILEELKR-EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTF 452
R+Q ++E++ R EE F +TLERG +L++ L D L G V L G+ F LYDT+
Sbjct: 350 RQQAVVEKVLRIEEENFGRTLERGMAILNEAL-DNL-----DGKV--LDGETVFKLYDTY 401
Query: 453 GFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKI-PDTE 511
GFP ++T +VA E ++D +GF+ ME QR++++ A N D +A A K+ TE
Sbjct: 402 GFPADLTNDVAREREFAIDEEGFEKAMEEQRQRAREAGN---FGTDYNA--AIKVDTQTE 456
Query: 512 FLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQG 571
F GY + V ++ V G V +S G ++L TPFYAESGGQ GD G + G
Sbjct: 457 FCGYTGTKGSSSVAAMFVEGNEVESLSAGDKAIIVLGETPFYAESGGQCGDAGEIRTEAG 516
Query: 572 TNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLL 631
V V+D +K LG+ H G + EGVL G EV IVD + R ++H+ATHLL
Sbjct: 517 ------VFRVEDTQK-LGNAIAHHGVMAEGVLAKGDEVATIVDAERRAAISLNHSATHLL 569
Query: 632 QAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKV 691
AAL++V+G+ +Q GSLV D LRFDF+ + EL+E+ERL+N I + ++T V
Sbjct: 570 HAALRQVLGEHVTQKGSLVKADSLRFDFSHLEAVTAAELKEVERLVNAQIRRNHTIETNV 629
Query: 692 MALDDAKRAGAIAMFGEKYGEQVKISS 718
M ++ AK+ GA+A+FGEKY ++V++ S
Sbjct: 630 MDIESAKKKGAMALFGEKYDDEVRVLS 656
>gi|354558116|ref|ZP_08977372.1| alanyl-tRNA synthetase [Desulfitobacterium metallireducens DSM
15288]
gi|353548841|gb|EHC18285.1| alanyl-tRNA synthetase [Desulfitobacterium metallireducens DSM
15288]
Length = 876
Score = 568 bits (1465), Expect = e-159, Method: Compositional matrix adjust.
Identities = 305/677 (45%), Positives = 431/677 (63%), Gaps = 30/677 (4%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
+G+ +R+ FL F+ S+GHK LPSASL+P +DPT+LLT+AGM+ FKP F+ KV PRA
Sbjct: 3 TGNELREMFLKFFESKGHKRLPSASLIPKDDPTLLLTVAGMVPFKPYFMRKVEPPFPRAT 62
Query: 108 TSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
T+Q+C+RT D+ENVG T+RHHTFFEMLGNFSFGDYFK E I WAWE+ T +P N+LW
Sbjct: 63 TAQKCVRTPDLENVGVTARHHTFFEMLGNFSFGDYFKSEVIPWAWEYVTEVLKIPVNQLW 122
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCS 227
I+V+ +D++A ++W ++ GV E I + +N W +G GPCG CSEIY D +RGC
Sbjct: 123 ITVHPEDEDARQLWLEKAGVQPERI--LNDPENLWAAGPVGPCGYCSEIYVDLGIERGCG 180
Query: 228 DVDLG---DDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNY 284
D D RF+E +NLVFMQYN+ ++G L PL ++NIDTG+GLERIA ++Q N+
Sbjct: 181 KPDCAVGCDCDRFLEIWNLVFMQYNRDENGMLTPLPKQNIDTGMGLERIAAVMQGAETNF 240
Query: 285 ETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVV 344
+TDL PII K +E+A V Y +T++ LK++ DH RA+ ++LSDG+ P GRGYV+
Sbjct: 241 DTDLFRPIIDKVAEIAGVQY-HVEAKTDIALKVVADHTRAVSFMLSDGIRPGRDGRGYVL 299
Query: 345 RRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKR 404
RR++RRA+R RLLGI + FL + H ++K E IL L+
Sbjct: 300 RRILRRAIRYARLLGI--------DKPFLEPVFRIIQRDYAHHYPELKENENFILNHLRL 351
Query: 405 EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAE 464
EE F TLE+G L+ Q +L E+ LSG DAF LY+T+GFPVE+T+E+
Sbjct: 352 EEKNFQATLEQG-TLMIQEKVKSLQEAVEN----ILSGADAFNLYETYGFPVELTEEILA 406
Query: 465 EHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEK---IPDTEFLGYDTLSAK 521
E G+SVDM G++I E RR ++ ++ +V +S +A K + T F GYD L
Sbjct: 407 EQGLSVDMAGYEIAAEEHRRLAKEQSQQMR-AVQESPAIAAKAKALGTTSFDGYDVLGEN 465
Query: 522 AIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEV 581
+E+L VNG+ V + ++G +V L++TPFYAESGGQ+ D G L + Q +
Sbjct: 466 VKIEALFVNGEAVTEAAEGDEVLCFLSQTPFYAESGGQVADLGILRTVRAEAQ------L 519
Query: 582 KDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQ 641
+VKK + + HK + +G+L G VEA+VD + R+ HH+ATHLLQAAL+ V+G+
Sbjct: 520 LEVKKGVTGTYYHKLLVTQGILHTGEMVEALVDQEARKATARHHSATHLLQAALRSVLGE 579
Query: 642 ETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAG 701
QAGSLV + LRFDF + + E++ +E +N I + T M +++AK +G
Sbjct: 580 HVQQAGSLVTPEHLRFDFTHFHAMTENEIQRVEDQLNQAILGNLSVSTAQMGIEEAKGSG 639
Query: 702 AIAMFGEKYGEQVKISS 718
A A+FGEKYG+ V++ S
Sbjct: 640 ATALFGEKYGDVVRVVS 656
>gi|240949596|ref|ZP_04753931.1| alanyl-tRNA synthetase [Actinobacillus minor NM305]
gi|240295854|gb|EER46530.1| alanyl-tRNA synthetase [Actinobacillus minor NM305]
Length = 874
Score = 568 bits (1465), Expect = e-159, Method: Compositional matrix adjust.
Identities = 307/681 (45%), Positives = 433/681 (63%), Gaps = 50/681 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH V+ S+SLVPE DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 7 IRQSFLDFFQSKGHTVVDSSSLVPENDPTLLFTNAGMNQFKDVFLGLEKRPYTRATTAQR 66
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEM+GNFSFGDYFK++AIQ+ WE+ T GLP +
Sbjct: 67 CVRAGGKHNDLENVGYTARHHTFFEMMGNFSFGDYFKQDAIQFGWEYLTSPQWLGLPKEK 126
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
L+++VYE DDEA++IW+K VGVP +HI R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 127 LYVTVYETDDEAYDIWHKIVGVPADHIIRIGDNKGAPYASDNFWAMGDTGPCGPCTEIFY 186
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D+ G D RFIE +N+VFMQ+N++ DG++E L + ++DTG+GLER+
Sbjct: 187 D-HGDKYWGGLPGTPEEDGDRFIEVWNIVFMQFNRQADGTMEKLPKPSVDTGMGLERMTA 245
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
++Q V +NYE D+ +IK +EL NV D N +L++I DH+R+ YL++DGV P
Sbjct: 246 VMQHVNSNYEIDIFQTLIKTVAELLNVK-----DLDNKSLRVIADHIRSCSYLIADGVVP 300
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN GRGYV+RR+IRRAVR G +LG K AF + ++ H V ++
Sbjct: 301 SNEGRGYVLRRIIRRAVRHGNILGAKE--------AFFYKLVPTLAQVMGHAGEIVAQKQ 352
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
I + LK EE +F +TLERG LL+ L ++T LSG AF LYDT+GFP
Sbjct: 353 AHIQKTLKAEEEQFARTLERGLALLEDALTKVENKT--------LSGDVAFKLYDTYGFP 404
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGY 515
+++T +V E +++D GF+ EM+ QR +++A+ N VD + ++ + T F+GY
Sbjct: 405 LDLTADVCRERNIAIDEAGFEAEMQAQRERAKASSN---FGVDYN-NVIKVDGKTNFIGY 460
Query: 516 DTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
D L+A+A V L NG V + G + ++L++TPFYAE GGQ+GD G + + +
Sbjct: 461 DNLTAEATVVGLFSNGNAVDVIKSGENAIIILDQTPFYAEMGGQVGDSGRI------STE 514
Query: 576 TAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAAL 635
V D +K G VF H G + G L+VG +V A V + R +++H+ATHLL +AL
Sbjct: 515 FCQFNVADTQK-YGQVFGHIGQLEAGELKVGDKVTAEVAAERRHSIQLNHSATHLLHSAL 573
Query: 636 KKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALD 695
+KV+G Q GSLV LRFDF+ + +LEEIER++N I + + + M ++
Sbjct: 574 RKVLGSHVMQKGSLVNEKGLRFDFSQPEAITKEQLEEIERIVNAKIRENIQVVIEEMGIE 633
Query: 696 DAKRAGAIAMFGEKYGEQVKI 716
+AK GA+A+FGEKYG+ V++
Sbjct: 634 EAKAKGAMALFGEKYGDIVRV 654
>gi|429143628|gb|AFZ77082.1| alanyl-tRNA synthetase [Gilliamella apicola]
Length = 877
Score = 568 bits (1465), Expect = e-159, Method: Compositional matrix adjust.
Identities = 319/686 (46%), Positives = 445/686 (64%), Gaps = 60/686 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+++ S+SLVP DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 7 IRQTFLDFFNSKGHEIVASSSLVPHNDPTLLFTNAGMNQFKDVFLGIEKRPYTRATTAQR 66
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND++NVG T+RHHTFFEMLGNFSFGDYFK +AI +AWE T + F LP ++
Sbjct: 67 CVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKHDAIHFAWELLTSKEWFNLPKDK 126
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
L ++VYE DDEA+EIW KE+G+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 127 LTVTVYETDDEAYEIWEKEIGIPKERIVRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 186
Query: 219 DFHPDR------GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLER 272
D H D G ++ D GD RFIE +N+VFMQ+N+ DG++EPL + ++DTG+GLER
Sbjct: 187 D-HGDHIWGGPPGSAEED-GD--RFIEIWNIVFMQFNRHPDGTMEPLPKPSVDTGMGLER 242
Query: 273 IARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDG 332
IA +LQ V +NYE DL +I A+++ Q+ D + +L++I DH+R+ +L+SDG
Sbjct: 243 IAAVLQHVNSNYEIDLFKKLIHDAAQII-----QTKDLESKSLRVIADHIRSCAFLISDG 297
Query: 333 VFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVK 392
V PSN GRGYV+RR+IRRAVR G +LG KG L + + A+EL
Sbjct: 298 VLPSNEGRGYVLRRIIRRAVRHGHMLGAKGIFFYKLVKPLIDVMGSAAVEL--------- 348
Query: 393 AREQRILEE-LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDT 451
A+ Q+I+E+ LK EE +F++TLERG LLDQ L + + SV L G AF LYDT
Sbjct: 349 AKNQKIVEDALKIEEEQFLKTLERGLFLLDQEL------VKITDSV--LPGDVAFKLYDT 400
Query: 452 FGFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPD-T 510
FGFP+++T +V E +++D GF+ ME QR++ A + SVD S + K+ D T
Sbjct: 401 FGFPLDLTADVCREKNITIDEDGFNQCMEEQRKR---ARESSTFSVDYSNVI--KLDDKT 455
Query: 511 EFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQ 570
EFLGY A V ++ NG+ V V+ G + ++L++TPFY ESGGQIGD G L
Sbjct: 456 EFLGYQATEASGEVIAIFQNGQKVENVNAGDEAIIILDKTPFYGESGGQIGDKGIL---T 512
Query: 571 GTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHL 630
N + V++ + KS+G H GT+ +G L+VG V A +D +LR+R + +H+ATHL
Sbjct: 513 SANAEFTVLDSQKYGKSIG----HIGTLVKGSLKVGDLVTAAIDVELRERIRRNHSATHL 568
Query: 631 LQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTK 690
LQAAL++++G Q GSLV LRFDF+ ++ + ++ EIE L+N I + +
Sbjct: 569 LQAALQQILGNHVHQKGSLVNDSYLRFDFSHNQSITQEQIVEIENLVNRQIRYNLPVDVE 628
Query: 691 VMALDDAKRAGAIAMFGEKYGEQVKI 716
+M +D+A+ GA+A+FGEKY E V++
Sbjct: 629 LMPIDEARNKGAMALFGEKYEEIVRV 654
>gi|53802423|ref|YP_112920.1| alanyl-tRNA synthetase [Methylococcus capsulatus str. Bath]
gi|59798499|sp|Q60BS6.1|SYA_METCA RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|53756184|gb|AAU90475.1| alanyl-tRNA synthetase [Methylococcus capsulatus str. Bath]
Length = 867
Score = 568 bits (1465), Expect = e-159, Method: Compositional matrix adjust.
Identities = 318/672 (47%), Positives = 431/672 (64%), Gaps = 40/672 (5%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
+R RFL F+A RGH V+ S+SLVP DPT+L T AGM+QFK +FLG+ R RAA++QR
Sbjct: 6 LRARFLKFFADRGHTVVASSSLVPVNDPTLLFTNAGMVQFKDVFLGREHRPYVRAASAQR 65
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK+EAI +AWEF T LP RLW
Sbjct: 66 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKREAIVYAWEFLTEVLMLPPERLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPD--RG 225
I+VY +D EA IW +EVGV R+ DNFW+ G TGPCGPCSEI+YD P G
Sbjct: 126 ITVYAEDKEAERIWLEEVGVDPGRFTRIATSDNFWSMGDTGPCGPCSEIFYDHGPSVAGG 185
Query: 226 CSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYE 285
D R++E +NLVFMQY + DG+L PL + ++DTG+GLER+A ++Q+V NNY+
Sbjct: 186 PPGTPEEDGDRYVEIWNLVFMQYERAGDGTLTPLPKPSVDTGMGLERLAAVMQRVRNNYD 245
Query: 286 TDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVR 345
DL ++K A+ELA + D +L++I DH+R+ +L++DGV PSN GRGYV+R
Sbjct: 246 IDLFRNLVKAAAELAG-----TTDLAQSSLRVIADHIRSCAFLVTDGVLPSNEGRGYVLR 300
Query: 346 RLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKRE 405
R+IRRA+R G LGI+ E F + E+ V+AR R+ + L +E
Sbjct: 301 RIIRRAIRHGYKLGIR-------EPFFYKLVGPLCAEMGQAYPELVEAR-PRVEQVLDKE 352
Query: 406 ELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEE 465
E RF +TLE+G K+LD + R+ GS P +SG AF LYDT+GFPV++T +VA E
Sbjct: 353 EERFAETLEQGMKILDVAI-------RDLGS-PVISGDTAFQLYDTYGFPVDLTADVARE 404
Query: 466 HGVSVDMKGFDIEMENQRRQSQAA-HNAVKLSVDDSADLAEKIPDTEFLGYDTLSAKAIV 524
HG+ VDM GF+ ME QR +++AA H +V S + D+A EF GY +
Sbjct: 405 HGLQVDMAGFERAMEAQRERARAASHFSVDYSQEIHLDVA-----CEFTGYRNAVEDTRI 459
Query: 525 ESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDV 584
+LL +G+ V ++ G D V+L +TPFYAESGGQ+GD G + +AV EV D
Sbjct: 460 VALLRDGQAVDRLEAGEDGVVVLEKTPFYAESGGQVGDRGVI------RSDSAVFEVADT 513
Query: 585 KKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETS 644
+K + +H+G +REG L G A V+ LR ++H+ATHLL AAL++V+G+ +
Sbjct: 514 RKQGSDLILHRGKLREGALLRGAVCRAEVEQSLRLATALNHSATHLLHAALRRVLGEHVT 573
Query: 645 QAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIA 704
Q GSLV +RLRFDF+ P+ +L+EIERL+N I + +VMA D A R GA+A
Sbjct: 574 QKGSLVDPERLRFDFSHFEPVSPEQLDEIERLVNREIRRNAEVTAEVMAKDAAMRLGAMA 633
Query: 705 MFGEKYGEQVKI 716
+FGEKYG+ V++
Sbjct: 634 LFGEKYGDDVRV 645
>gi|332289629|ref|YP_004420481.1| alanyl-tRNA synthetase [Gallibacterium anatis UMN179]
gi|330432525|gb|AEC17584.1| alanyl-tRNA synthetase [Gallibacterium anatis UMN179]
Length = 874
Score = 568 bits (1465), Expect = e-159, Method: Compositional matrix adjust.
Identities = 308/684 (45%), Positives = 435/684 (63%), Gaps = 56/684 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ +LDF+ S+GH+++ S+SLVPE DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 7 IRQSYLDFFHSKGHQIVASSSLVPENDPTLLFTNAGMNQFKDVFLGIDKRSYHRATTAQR 66
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AI +AWEF T GLP +
Sbjct: 67 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIHFAWEFLTSPQWLGLPKEK 126
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE D+EA+ IW++++GVP + I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 127 LWVTVYETDEEAYNIWHQQIGVPADRIVRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 186
Query: 219 DFHPDR------GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLER 272
D H D G ++ D GD R+IE +N+VFMQYN+ DG++E L + ++DTG+GLER
Sbjct: 187 D-HGDHIWGGPPGSAEED-GD--RYIEIWNIVFMQYNRLADGTMEKLPKPSVDTGMGLER 242
Query: 273 IARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDG 332
I+ +LQ V +NY+ D+ +I K +E+ D N +L++I DH+R+ YL++DG
Sbjct: 243 ISAVLQHVNSNYDIDIFKVLIAKVAEITG-----EKDLANKSLRVIADHIRSCAYLIADG 297
Query: 333 VFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVK 392
V+PSN GRGYV+RR+IRRAVR G LLG K F + IE+ +K
Sbjct: 298 VYPSNEGRGYVLRRIIRRAVRHGHLLGAKD--------TFFYKLVPTLIEVMAQAGEILK 349
Query: 393 AREQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTF 452
++ I + L+ EE +F +TLERG LLD LA G+V LSG+ AF LYDT+
Sbjct: 350 EKQVHIEKLLRLEEEQFARTLERGLALLDAELASL------KGNV--LSGEVAFKLYDTY 401
Query: 453 GFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEF 512
GFP+++T +V E +++D GF+ EME QR ++QAA D +L T F
Sbjct: 402 GFPLDLTADVCRERDIAIDEDGFNREMEAQRERAQAASQFGM----DYNNLIRVDGTTAF 457
Query: 513 LGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGT 572
GY + A V ++ V+GK V +V G ++L TPFYAESGGQ+GD G L
Sbjct: 458 EGYHAAESLAKVSAIFVDGKEVNQVQAGQSAVIILENTPFYAESGGQVGDSGIL------ 511
Query: 573 NQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQ 632
A+ V D +K G VF H G +++G ++VG+ + A+VD + RQ ++H+ATHLL
Sbjct: 512 ESADALFTVNDTQK-YGQVFGHIGELKKGEIKVGQTLHAVVDAERRQATSLNHSATHLLH 570
Query: 633 AALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVM 692
AAL++V+G +Q GSLV+ LRFDF+ + ++ EIER++N I +++ + M
Sbjct: 571 AALRQVLGTHVAQKGSLVSDKLLRFDFSQPEAISKAQIAEIERIVNSQIRANHVVSVEEM 630
Query: 693 ALDDAKRAGAIAMFGEKYGEQVKI 716
++ AK GA+A+FGEKYG++V++
Sbjct: 631 DIEAAKAKGAMALFGEKYGDRVRV 654
>gi|430807957|ref|ZP_19435072.1| alanyl-tRNA ligase [Cupriavidus sp. HMR-1]
gi|429499714|gb|EKZ98120.1| alanyl-tRNA ligase [Cupriavidus sp. HMR-1]
Length = 874
Score = 568 bits (1465), Expect = e-159, Method: Compositional matrix adjust.
Identities = 313/681 (45%), Positives = 423/681 (62%), Gaps = 44/681 (6%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR +FL F+ S+GH V+ S+SLVP DPT+L T +GM+QFK +FLG R RA +SQR
Sbjct: 6 IRSKFLQFFESKGHTVVRSSSLVPANDPTLLFTNSGMVQFKDVFLGTDKRPYVRATSSQR 65
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK+EAIQ+AWE T + LPA++LW
Sbjct: 66 SVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKREAIQYAWELLTKVYQLPADKLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYYDF 220
++VY +DDEA++IW KEVGVP + I R+G A DNFW TGPCGPCSEI+YD
Sbjct: 126 VTVYAEDDEAYDIWAKEVGVPADRIVRIGDNKGARYASDNFWQMADTGPCGPCSEIFYDH 185
Query: 221 HPD--RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQ 278
PD G D R+IE +NLVFMQ+N+ + G++ PL + +DTG+GLERIA +LQ
Sbjct: 186 GPDVWGGPPGSPEEDGDRYIEIWNLVFMQFNRDEQGTMTPLPKPCVDTGMGLERIAAVLQ 245
Query: 279 KVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNI 338
V +NYE DL +IK A +++ N +LK+I DH+RA +L+ DGV P N
Sbjct: 246 HVHSNYEIDLFQALIKGAGRETHIADLNQN-----SLKVIADHIRACSFLIVDGVIPGNE 300
Query: 339 GRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRI 398
GRGYV+RR++RRA+R G LG K L G + + E EL+ + R+
Sbjct: 301 GRGYVLRRIVRRAIRHGYKLGQKTPFFHKLVGDLVAQMGEAYPELAE--------AQSRV 352
Query: 399 LEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEI 458
+E LK EE RF +T+E G +LD +AD ++ G V L G+ AF L+DTFGFP+++
Sbjct: 353 VEVLKAEEERFFETIENGMSILDAAVADLKAK---GGKV--LDGELAFKLHDTFGFPLDL 407
Query: 459 TKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTL 518
T++VA E ++VD FD M QR Q++AA K+ +A L T F GYD+L
Sbjct: 408 TQDVAREQEITVDEAAFDAAMTRQREQARAA-GKFKM----AAGLEYSGEKTVFHGYDSL 462
Query: 519 SAKAI-VESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTA 577
S + + V +L V+G V + G V+L+ TPFYAESGGQ+GD G L A
Sbjct: 463 SMEGVRVTALYVDGASVDTMQPGQSGVVVLDNTPFYAESGGQVGDQGTLV------SGPA 516
Query: 578 VVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKK 637
V V D K VF H+GT+ G L+VG V A VD R R +H+ATHL+ AL++
Sbjct: 517 VFAVADTTKIQSDVFGHQGTLANGALKVGDTVAAQVDAVRRARTVRNHSATHLMHKALRE 576
Query: 638 VIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDA 697
V+G Q GSLV D+ RFDF+ + PL D ++ +IE ++N I +VM DDA
Sbjct: 577 VLGTHVQQKGSLVDPDKTRFDFSHNAPLTDAQIRQIEEIVNAEILSNAPTVAQVMPFDDA 636
Query: 698 KRAGAIAMFGEKYGEQVKISS 718
++GA+A+FGEKY + V++ S
Sbjct: 637 VKSGAMALFGEKYADDVRVLS 657
>gi|384085449|ref|ZP_09996624.1| alanyl-tRNA synthetase [Acidithiobacillus thiooxidans ATCC 19377]
Length = 877
Score = 568 bits (1465), Expect = e-159, Method: Compositional matrix adjust.
Identities = 305/676 (45%), Positives = 432/676 (63%), Gaps = 35/676 (5%)
Query: 52 SIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQ 110
+IR+ FLD++ +GH+++PS+SL+P DPT+L T AGM+ FK +FLG R RA +SQ
Sbjct: 5 AIRQAFLDYFVEQGHQIVPSSSLIPRNDPTLLFTNAGMVPFKDVFLGLEQRPYQRAVSSQ 64
Query: 111 RCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRL 166
RC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK+E I +AW F T + LPA +L
Sbjct: 65 RCMRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKREVIGFAWRFLTEKLRLPAAKL 124
Query: 167 WISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGC 226
WI+VYE+DDEA +IW E+G+ I R GA DNFW+ G TGPCGPCSEI+YD PD
Sbjct: 125 WITVYEEDDEAAQIWINEMGIDPARISRCGAKDNFWSMGDTGPCGPCSEIFYDHGPDVPG 184
Query: 227 SDVDLG--DDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNY 284
D R+IE +NLVFMQY++ G L PL + ++DTG+GLER+A +LQ V NNY
Sbjct: 185 GPPGSPEEDGDRYIEIWNLVFMQYDRDSSGKLTPLPKPSVDTGMGLERLAAVLQGVHNNY 244
Query: 285 ETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVV 344
+TDL P+I A+ ++ +Y Q + T+ +L+++ DH+RA +L++DGV P+N GRGYV+
Sbjct: 245 DTDLFKPLIAAAAAISGTTYGQ-DATTDTSLRVLADHIRACSFLITDGVLPANEGRGYVL 303
Query: 345 RRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAI-ELSTHIDSDVKAREQRILEE-L 402
RR+IRRAVR GR LG +E F + + E+ T +A QR +E L
Sbjct: 304 RRIIRRAVRHGRKLG--------MENVFFHKLVAPLVREMGTAFPELAQA--QRDVERAL 353
Query: 403 KREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEV 462
+REE RF +TLERG LL+ DA+S ++P G+ F L DT+GFPV++T ++
Sbjct: 354 EREETRFRETLERGLSLLE----DAISGLPADAAIP---GEIIFRLADTYGFPVDLTADI 406
Query: 463 AEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSA--DLAEKIPDTEFLGYDTLSA 520
A E + +DM+G+++ M QR +S+AA + + DLA ++ T+F GY
Sbjct: 407 ARERNLRMDMEGYEVAMSEQRNRSRAAWSGSGEVKTERIYHDLAMRLAATQFTGYTQCVG 466
Query: 521 KAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVE 580
+ V +LL +G+ V + G V+L++TPFY ESGGQ GD G L + AV
Sbjct: 467 EGKVLALLRDGEEVAFLDAGDKGIVILDQTPFYGESGGQSGDRGEL------QSEHAVFL 520
Query: 581 VKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIG 640
V D +K +GS+ VH G ++ G L+ G + A VD R+ HH+ATHLL +AL+ ++G
Sbjct: 521 VNDTQKPMGSLHVHVGVLQSGRLQTGDTLLASVDELARRATAAHHSATHLLHSALRNILG 580
Query: 641 QETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRA 700
Q GSLV +RLRFDF+ PL +L+EIER +N I + T+V+ + +A+
Sbjct: 581 SHVQQKGSLVNPERLRFDFSHPEPLTSAQLQEIERSVNEVIRENYAADTQVLPIAEAQAL 640
Query: 701 GAIAMFGEKYGEQVKI 716
GA+A+FGEKYG++V++
Sbjct: 641 GAMALFGEKYGDEVRV 656
>gi|344344515|ref|ZP_08775377.1| alanyl-tRNA synthetase [Marichromatium purpuratum 984]
gi|343803922|gb|EGV21826.1| alanyl-tRNA synthetase [Marichromatium purpuratum 984]
Length = 869
Score = 568 bits (1464), Expect = e-159, Method: Compositional matrix adjust.
Identities = 304/674 (45%), Positives = 432/674 (64%), Gaps = 43/674 (6%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
+R FLD++A R H+ + S+ LVP DPT+L T AGM+QFK +FLG+ R RA T+QR
Sbjct: 7 LRASFLDYFAQRQHEQVSSSPLVPANDPTLLFTNAGMVQFKDVFLGRERRGYSRAVTAQR 66
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK+EAI +AW++ T E GLPA RLW
Sbjct: 67 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKREAIGFAWQYLTGELGLPAERLW 126
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPD---- 223
++VYEDDDEA +IW KE+GV E R GA DNFW+ G TGPCGPCSEI++D P+
Sbjct: 127 VTVYEDDDEAADIWLKEIGVSAERFSRCGAKDNFWSMGDTGPCGPCSEIFFDHGPEIAGG 186
Query: 224 -RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPN 282
G D D GD R++E +NLVFMQ+N+ +G++ PL + ++DTG+GLER+A +LQ V +
Sbjct: 187 PPGSPDED-GD--RYVEIWNLVFMQFNRDAEGNMTPLPRPSVDTGMGLERLAAVLQGVHS 243
Query: 283 NYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGY 342
NY+ DL +I A+E D + +L++I DH+R+ +L+ DGV P N GRGY
Sbjct: 244 NYDIDLFRNLIAAAAEATGC-----EDLGDKSLRVIADHIRSSAFLIVDGVTPGNEGRGY 298
Query: 343 VVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEEL 402
V+RR++RRA+R G LG L A + + EL +A +RI +
Sbjct: 299 VLRRIMRRAIRHGYRLGQSQPFFHRLVAALVAEMGAAYPELVA-----AQAHVERI---V 350
Query: 403 KREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEV 462
+ EE RF +TLE G ++LD+ +A G + G+ F LYDT+GFP ++T ++
Sbjct: 351 RLEEERFAETLEHGMRILDEAIAGL-------GDTCTIPGETVFKLYDTYGFPTDLTADI 403
Query: 463 AEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTLSAKA 522
A E G+ VD++GF+ M +Q+ +++AA + D DL +TEF GY+ +A
Sbjct: 404 ARERGLGVDLEGFEAAMADQKARARAA-SQFSGGQDVEIDLQ---GETEFRGYERCEDEA 459
Query: 523 IVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVK 582
V +L +G+ + G V+L+ TPFY ESGGQ+GD G++ + G EV
Sbjct: 460 TVVALYRDGESCDSLGGGERGMVILDLTPFYGESGGQVGDRGWITGSGGR------FEVT 513
Query: 583 DVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQE 642
D +K G++ H G +REG L VG V A VD + R+ ++H+ATHLL AAL++V+G+
Sbjct: 514 DTQKKGGALVCHIGELREGELCVGDMVCAEVDGERRRAIALNHSATHLLHAALRRVLGEH 573
Query: 643 TSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGA 702
Q GSLV +RLRFDF+ P+ +L EIERL+NG I +L++T++M+L+DAK +GA
Sbjct: 574 VQQKGSLVGPERLRFDFSHFEPVSREQLREIERLVNGEIRANHLVETRIMSLEDAKASGA 633
Query: 703 IAMFGEKYGEQVKI 716
+A+FGEKY +QV++
Sbjct: 634 MALFGEKYADQVRV 647
>gi|53729167|ref|ZP_00134001.2| COG0013: Alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|126208134|ref|YP_001053359.1| alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 5b
str. L20]
gi|205829968|sp|A3N018.1|SYA_ACTP2 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|126096926|gb|ABN73754.1| alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 5b
str. L20]
Length = 874
Score = 568 bits (1464), Expect = e-159, Method: Compositional matrix adjust.
Identities = 305/681 (44%), Positives = 431/681 (63%), Gaps = 50/681 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH V+PS+SLVPE DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 7 IRQSFLDFFHSKGHTVVPSSSLVPENDPTLLFTNAGMNQFKDVFLGLEKRPYTRATTAQR 66
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEM+GNFSFGDYFK +AIQ+ WE+ T GLP +
Sbjct: 67 CVRAGGKHNDLENVGYTARHHTFFEMMGNFSFGDYFKHDAIQFGWEYLTSPQWLGLPKEK 126
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
L+++VYE DDEA++IWNK VGVP +HI R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 127 LYVTVYETDDEAYDIWNKIVGVPTDHIIRIGDNKGAPYASDNFWAMGDTGPCGPCTEIFY 186
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H + G D R+IE +N+VFMQ+N+ DG++E L + ++DTG+GLER+
Sbjct: 187 D-HGETFWGGLPGSPEEDGDRYIEVWNIVFMQFNRLADGTMEKLPKPSVDTGMGLERMTA 245
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
++Q V +NYETD+ +IK+ + L NVS D N +L+++ DH+RA YL++DGV P
Sbjct: 246 VMQHVNSNYETDIFQTLIKEVAGLLNVS-----DLDNKSLRVVADHIRACSYLIADGVVP 300
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN GRGYV+RR+IRRAVR G LLG K AF + + H + ++
Sbjct: 301 SNEGRGYVLRRIIRRAVRHGNLLGAKE--------AFFYKLVPTLATVMGHAGEVLTQKQ 352
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
I + LK EE +F +TLERG LL+ DAL++ + LSG+ AF LYDT+GFP
Sbjct: 353 AHIQKTLKAEEEQFARTLERGLALLE----DALTKVENN----TLSGEVAFKLYDTYGFP 404
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGY 515
+++T +V E +++D GF+ EM QR +++A+ N D ++ + T+F+GY
Sbjct: 405 LDLTADVCRERELTIDEAGFEAEMTAQRERAKASSNFGT----DYNNVIKVEGQTDFIGY 460
Query: 516 DTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
D L A+A + L NGK V + G ++L++T FYAE GGQ+GD G + + +
Sbjct: 461 DNLEAQATIVGLFSNGKAVDTIQSGESAVIILDQTSFYAEMGGQVGDSGLI------STE 514
Query: 576 TAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAAL 635
V D +K G VF H G + G L +G +V A V R +H+ATHLL +AL
Sbjct: 515 ICNFAVNDTQK-YGQVFGHIGQLTSGSLSIGDKVTATVHATRRIAITANHSATHLLHSAL 573
Query: 636 KKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALD 695
++V+G +Q GSLV+ + LRFDF+ + ++LEEIER++N I + + + M ++
Sbjct: 574 REVLGDHVAQKGSLVSENILRFDFSQPEAISKSQLEEIERIVNRKIRENIQVTIETMDIE 633
Query: 696 DAKRAGAIAMFGEKYGEQVKI 716
AK+ GA+A+FGEKYG+ V++
Sbjct: 634 SAKKKGAMALFGEKYGDVVRV 654
>gi|260767196|ref|ZP_05876138.1| alanyl-tRNA synthetase [Vibrio furnissii CIP 102972]
gi|260617804|gb|EEX42981.1| alanyl-tRNA synthetase [Vibrio furnissii CIP 102972]
Length = 860
Score = 568 bits (1464), Expect = e-159, Method: Compositional matrix adjust.
Identities = 308/686 (44%), Positives = 424/686 (61%), Gaps = 49/686 (7%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S D +R+ FL F+ S+GH+++ S+SLVP DPT+L T AGM QFK FLG R RA
Sbjct: 4 STDEVRRAFLSFFESKGHQIVDSSSLVPANDPTLLFTNAGMNQFKDCFLGLEKRAYTRAT 63
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
T+QRC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI++AWEF T LP
Sbjct: 64 TAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIKFAWEFLTEVLQLPK 123
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG--------ADDNFWNSGATGPCGPCSE 215
RL ++VY+ DDEAF+IWNK+VG+P + I R+G DNFW G TGPCGPC+E
Sbjct: 124 ERLLVTVYQTDDEAFDIWNKQVGIPADRIVRIGDKPGGKAYESDNFWQMGDTGPCGPCTE 183
Query: 216 IYYDF--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERI 273
I+YD H G D RFIE +N VFMQ+N+ DG +EPL + ++DTG+G+ERI
Sbjct: 184 IFYDHGEHIWGGRPGSPEEDGDRFIEIWNNVFMQFNRHADGKMEPLPKPSVDTGMGIERI 243
Query: 274 ARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGV 333
+ I+Q V +NYE D+ +IK A+++ + Y +D +N +L+++ DH+R+ +L+ DGV
Sbjct: 244 SAIMQGVHSNYEIDVFQTLIKAAADV--IGY---DDLSNQSLRVVADHIRSCAFLIVDGV 298
Query: 334 FPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKA 393
PSN GRGYV+RR+IRRAVR G LG K GAF + ++ ++K
Sbjct: 299 MPSNEGRGYVLRRIIRRAVRHGNKLGAK--------GAFFYKLVGPLADVMGSAGEELKK 350
Query: 394 REQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFG 453
+ + + L+ EE F +TL+RG +L++ L DALS T L G+ F LYDT+G
Sbjct: 351 QHAIVEKVLRIEEENFGRTLDRGMAILNEAL-DALSGT-------ELDGETVFKLYDTYG 402
Query: 454 FPVEITKEVAEEHGVSVDMKGFDIEMENQR-RQSQAAHNAVKLSVDDSADLAEKIPDTEF 512
FP ++T +VA E G ++D GF+ ME QR R +A H D L + TEF
Sbjct: 403 FPADLTNDVARERGFTIDEAGFEAAMEEQRQRAREAGHFGT-----DYNQLIKVEGATEF 457
Query: 513 LGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGT 572
GY ++ + + V G+ +S G ++LN TPFYAESGGQ GD G L G
Sbjct: 458 CGYSATQGESTITEMFVEGQAAASLSAGDKAIIVLNETPFYAESGGQCGDAGVLKTDAG- 516
Query: 573 NQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQ 632
V V D +K LG+ H G + EGV G V AIVD K R ++H+ATHLL
Sbjct: 517 -----VFHVVDTQK-LGNAIAHHGVMAEGVFAQGDTVHAIVDAKRRAAISLNHSATHLLH 570
Query: 633 AALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVM 692
AAL++V+G+ +Q GSLV + LRFDF+ + EL+E+ERL+N + + ++T +M
Sbjct: 571 AALRRVLGEHVTQKGSLVRAEGLRFDFSHLEAVSAAELKEVERLVNEQVRTNHRIETNIM 630
Query: 693 ALDDAKRAGAIAMFGEKYGEQVKISS 718
+D AK GA+A+FGEKY EQV++ S
Sbjct: 631 DIDAAKAKGAMALFGEKYDEQVRVLS 656
>gi|407791039|ref|ZP_11138128.1| alanyl-tRNA ligase [Gallaecimonas xiamenensis 3-C-1]
gi|407201682|gb|EKE71679.1| alanyl-tRNA ligase [Gallaecimonas xiamenensis 3-C-1]
Length = 873
Score = 568 bits (1464), Expect = e-159, Method: Compositional matrix adjust.
Identities = 307/681 (45%), Positives = 433/681 (63%), Gaps = 52/681 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR FL+++ +GH+++PS+SL+P DPT+L T AGM+QFK +FLG R RA +SQR
Sbjct: 8 IRDAFLNYFKDKGHQIVPSSSLIPGNDPTLLFTNAGMVQFKDVFLGSDKRAYTRATSSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK+ AIQ+AWEF T LPA +LW
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKEGAIQYAWEFLTQVVKLPAEKLW 127
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYYDF 220
++VYE DDEA++IW KEVGVP + I R+G A DNFW+ G TGPCGPC+EI+YD
Sbjct: 128 VTVYETDDEAYDIWAKEVGVPTDRIIRIGDNKGAPYASDNFWSMGDTGPCGPCTEIFYDH 187
Query: 221 --HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQ 278
H G D R+IE +N+VFMQ+N+ DG +EPL + ++DTG+GLERI+ ILQ
Sbjct: 188 GEHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRHGDGRMEPLPKPSVDTGMGLERISAILQ 247
Query: 279 KVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNI 338
V +NYE D+ +IK A++ S D N +L+++ DH+R+ +L+ DGV PSN
Sbjct: 248 HVHSNYEIDIFQHLIKAAAKAIG-----SEDLENKSLRVVADHIRSCSFLVVDGVMPSNE 302
Query: 339 GRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRI 398
GRGYV+RR++RRAVR G LG F + I++ ++K ++ I
Sbjct: 303 GRGYVLRRIVRRAVRHGAQLGAS--------EPFFYKLVAALIDVMGDAYPELKEKQAII 354
Query: 399 LEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEI 458
+ L EE +F +TLERG KLLD+ LAD GSV + G F LYDT+GFPV++
Sbjct: 355 EKALLMEEEQFRKTLERGLKLLDEALADI------QGSV--IPGDVVFKLYDTYGFPVDL 406
Query: 459 TKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIP---DTEFLGY 515
T +VA E G+++D GF+ ME QR++++ A N AD ++ T+F GY
Sbjct: 407 TNDVARERGLTLDEAGFETAMEAQRQRAKQASNF-------GADYNSRLDIDCQTQFSGY 459
Query: 516 DTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
D + + V +L G V V G +V V+L RTPFY ESGGQ+GD G L +
Sbjct: 460 DGVRDVSPVVALFKGGDAVDSVQAGDEVLVVLERTPFYGESGGQVGDTGEL------SSD 513
Query: 576 TAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAAL 635
A + + + KS G FVH G + EG +++G +++A VD R +++H+ATHL AAL
Sbjct: 514 GARILIHNTTKS-GDAFVHHGKVAEGSIKLGDKLKAEVDKTRRDAIRLNHSATHLAHAAL 572
Query: 636 KKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALD 695
+KV+G+ +Q GSLV +R+RFDF+ + E+ EIERL+N I + + T++M ++
Sbjct: 573 RKVLGEHVTQKGSLVDSERMRFDFSHFEGVKGVEISEIERLVNNEIRANHAVTTRLMQIE 632
Query: 696 DAKRAGAIAMFGEKYGEQVKI 716
+AK AGA+A+FGEKY ++V++
Sbjct: 633 EAKAAGAMALFGEKYDDEVRV 653
>gi|424042522|ref|ZP_17780225.1| alanine--tRNA ligase [Vibrio cholerae HENC-02]
gi|408889489|gb|EKM27905.1| alanine--tRNA ligase [Vibrio cholerae HENC-02]
Length = 858
Score = 568 bits (1463), Expect = e-159, Method: Compositional matrix adjust.
Identities = 316/687 (45%), Positives = 434/687 (63%), Gaps = 51/687 (7%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S D +R FL F+ S+GH+++ S+SLVP DPT+L T AGM QFK FLG R RA
Sbjct: 2 STDEVRNAFLKFFESKGHQIVESSSLVPHNDPTLLFTNAGMNQFKDCFLGLEKRAYTRAT 61
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
T+QRC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI +AWEF T LPA
Sbjct: 62 TAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAISFAWEFLTETLKLPA 121
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG--------ADDNFWNSGATGPCGPCSE 215
+RL ++VYE DDEAF+IWNK+VGVP + I R+G DNFW G TGPCGPC+E
Sbjct: 122 DRLLVTVYETDDEAFDIWNKKVGVPADRIIRIGDKKGGKPYESDNFWQMGDTGPCGPCTE 181
Query: 216 IYYDF--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERI 273
I+YD H G D RFIE +N VFMQ+N+ DG++EPL + ++DTG+G+ERI
Sbjct: 182 IFYDHGEHIWGGRPGTPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPSVDTGMGIERI 241
Query: 274 ARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGV 333
+ I+Q V +NYE D+ +IK A+E+ + Y D +N +L++I DH+R+ +L+ DGV
Sbjct: 242 SAIMQGVHSNYEIDVFQALIKAAAEV--IGY---EDLSNQSLRVIADHIRSCSFLIVDGV 296
Query: 334 FPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKA 393
PSN GRGYV+RR+IRRAVR G LG +GAF + E+ ++K
Sbjct: 297 MPSNEGRGYVLRRIIRRAVRHGNKLGA--------QGAFFHKLVGVLAEIMGTAGEELK- 347
Query: 394 REQRILEELKR-EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTF 452
R+Q ++E++ R EE F +TLERG +L++ L D L G V L G+ F LYDT+
Sbjct: 348 RQQAVVEKVLRIEEENFGRTLERGMAILNEAL-DNL-----DGKV--LDGETVFKLYDTY 399
Query: 453 GFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKI-PDTE 511
GFP ++T +VA E ++D +GF+ ME QR++++ A N D +A A K+ TE
Sbjct: 400 GFPADLTNDVAREREFAIDEEGFEKAMEEQRQRAREAGN---FGTDYNA--AIKVDTQTE 454
Query: 512 FLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQG 571
F GY + V ++ V G V +S G ++L TPFYAESGGQ GD G + G
Sbjct: 455 FCGYAGTKGSSSVAAMFVEGNEVESLSAGDKAIIVLGETPFYAESGGQCGDAGEIRTESG 514
Query: 572 TNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLL 631
V V+D +K LG+ H G + EGVL G EV IVD + R ++H+ATHLL
Sbjct: 515 ------VFRVEDTQK-LGNAIAHHGVMAEGVLAKGDEVATIVDAERRAAISLNHSATHLL 567
Query: 632 QAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKV 691
AAL++V+G+ +Q GSLV D LRFDF+ + EL+E+ERL+N I + ++T V
Sbjct: 568 HAALRQVLGEHVTQKGSLVKADSLRFDFSHLEAVTAAELKEVERLVNAQIRRNHTIETNV 627
Query: 692 MALDDAKRAGAIAMFGEKYGEQVKISS 718
M ++ AK+ GA+A+FGEKY ++V++ S
Sbjct: 628 MDIESAKKKGAMALFGEKYDDEVRVLS 654
>gi|423121786|ref|ZP_17109470.1| alanyl-tRNA synthetase [Klebsiella oxytoca 10-5246]
gi|376393399|gb|EHT06056.1| alanyl-tRNA synthetase [Klebsiella oxytoca 10-5246]
Length = 875
Score = 568 bits (1463), Expect = e-159, Method: Compositional matrix adjust.
Identities = 309/689 (44%), Positives = 437/689 (63%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRHYSRATTAQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI++AWE T E F LP ++
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAIKYAWELLTGENWFALPKDK 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEAF+IW EVGVP E I R+G A DNFW G TGPCGPC+EI++
Sbjct: 128 LWVTVYETDDEAFDIWANEVGVPRERIIRIGDNKGAAFASDNFWQMGDTGPCGPCTEIFF 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +I+ + + + D TN +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRTLIENVARVTGAT-----DLTNKSLRVIADHIRSCAFLIADGVIP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K F + I++ ++K ++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAKE--------TFFWKLVAPLIDVMGAAGEELKQQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ LK EE +F +TLERG LLD+ L+ T L G+ AF LYDT+GFP
Sbjct: 354 AQVEHVLKTEEEQFARTLERGLALLDEELSKLKGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQ------AAHNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRARESSGFGADYNAM-IRVDGA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD L A V +L ++GK V V+ G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDHLELNAKVTALFIDGKAVDAVTAGQEAVVILDQTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G AV + + +++G H G + G L+VG +EA VD RQR +++H+ATH
Sbjct: 513 KGAGFSFAVSDTQKYGQAIG----HIGKLSHGTLKVGDALEADVDRARRQRIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G +Q GSLV LRFDF+ + E+ +E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVAQKGSLVNDKALRFDFSHFEAMKPEEIRAVEDLVNAQIRRNLPVET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M +D A+ +GA+A+FGEKY ++V++ S
Sbjct: 629 NIMDIDAARESGAMALFGEKYDDRVRVLS 657
>gi|256844995|ref|ZP_05550453.1| alanyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
gi|256718554|gb|EEU32109.1| alanyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
Length = 867
Score = 568 bits (1463), Expect = e-159, Method: Compositional matrix adjust.
Identities = 293/674 (43%), Positives = 437/674 (64%), Gaps = 35/674 (5%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
+G+ IR++F++F+ + HK SASL+P+DPT+LLT+AGM+ FKP FLG+ PR T
Sbjct: 3 TGNEIREKFIEFFMQKQHKHFESASLIPDDPTLLLTVAGMVPFKPYFLGQKEAPCPRVTT 62
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
Q+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFKKEAI+W+WEF T + ++LW+
Sbjct: 63 YQKCIRTNDLENVGRTARHHTFFEMLGNFSFGDYFKKEAIKWSWEFVTEVLKINKDKLWV 122
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYD----FHPDR 224
+V+ DDEA +IW +E P E I RMG +N+W++G TG CGPCSEI+ D + D+
Sbjct: 123 TVFTTDDEAEKIWIEECNFPKERIVRMGESENWWSAGPTGSCGPCSEIHVDLGVQYGGDK 182
Query: 225 GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNY 284
D G D RFIE +NLVF ++N+ +DGSLEPL +KNIDTG GLERIA ++Q NN+
Sbjct: 183 NSKIGDEGTDNRFIEIWNLVFTEWNRMEDGSLEPLPKKNIDTGAGLERIAAVVQGKTNNF 242
Query: 285 ETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVV 344
ETDL+FPI+++A+++ Y + N T+ +LK+I DH RA+ +L++DGV PSN GRGY++
Sbjct: 243 ETDLLFPILEEAAKITGSQYGK-NSETDFSLKVITDHARAVTFLINDGVIPSNEGRGYIL 301
Query: 345 RRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKR 404
RR++RRAVR GRLLG K F+ + +K +E D+K + I + +K
Sbjct: 302 RRILRRAVRHGRLLGYK--------DLFMYKMVDKVVEKFEVAYPDLKKNLENIRKIVKI 353
Query: 405 EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAE 464
EE +F TL++G +L++Q + + L+ + +L G+ +F LYDT+GFP E+T+E+AE
Sbjct: 354 EEEKFSNTLDQGIQLVNQEIDNLLANGKN-----KLDGEISFKLYDTYGFPYELTEEIAE 408
Query: 465 EHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDS--ADLAEKIPDTEFLGYDTLSAKA 522
E G++V + F+ +ME Q+ ++++A V DS + +K T+F GY+ K
Sbjct: 409 ERGITVLREEFEAKMEEQKEKARSAREVVMEKGQDSFIEEFYDKYGVTKFTGYE----KT 464
Query: 523 IVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVK 582
E L+N ++ +K ++ ++TPFYAESGGQ+GD G +Y V +V
Sbjct: 465 EDEGKLLN----LRETKDGKYLLIFDKTPFYAESGGQVGDQGKIY------SDNFVGKVL 514
Query: 583 DVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQE 642
DV+K +F+H +G+ E + + +VD R +HTATHLL AL++V+G
Sbjct: 515 DVQKQ-KDIFIHTVEFEKGISEENKTYKLVVDVVRRLDTAKNHTATHLLHKALREVVGTH 573
Query: 643 TSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGA 702
QAGSLV ++LRFDF+ + L +L +IE ++N I + + +++AK+ GA
Sbjct: 574 VQQAGSLVDPEKLRFDFSHYEALTAEQLSKIEDIVNEKIREGIEVSISYHNIEEAKKLGA 633
Query: 703 IAMFGEKYGEQVKI 716
+ +FG+KYG+ V++
Sbjct: 634 MMLFGDKYGDMVRV 647
>gi|386078229|ref|YP_005991754.1| alanyl-tRNA synthetase AlaS [Pantoea ananatis PA13]
gi|354987410|gb|AER31534.1| alanyl-tRNA synthetase AlaS [Pantoea ananatis PA13]
Length = 875
Score = 568 bits (1463), Expect = e-159, Method: Compositional matrix adjust.
Identities = 310/681 (45%), Positives = 426/681 (62%), Gaps = 50/681 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG+ R RA TSQR
Sbjct: 8 IRQAFLDFFNSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGQEKRDYTRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFKKEAI +AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKKEAIAFAWELLTGEQWFKLPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA++IW ++GVP E I R+G A DNFW G TGPCGPCSEI+Y
Sbjct: 128 LWVTVYETDDEAYDIWANDIGVPRERIIRIGDNKGSAYASDNFWQMGDTGPCGPCSEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++ PL + ++DTG+GLERI
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMLPLPKPSVDTGMGLERITA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NYE DL +I+ +++ + D N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYEIDLFQTLIEAVAKVTGAT-----DLNNKSLRVIADHIRSCAFLIADGVIP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K AF + I++ +++ ++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAKD--------AFFYKLVAPLIQVMGAAGEELQRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ LK EE +F +TLERG LLD+ LA T L G+ F LYDTFGFP
Sbjct: 354 AQVENVLKSEEEQFAKTLERGLALLDEELAKLQGDT--------LDGETVFRLYDTFGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGY 515
++T +V E + +D GF+ ME QR Q A A D S ++ + F GY
Sbjct: 406 ADLTADVCRERNLKIDEAGFEKAMEQQR---QRAREASGFGADYS-NVIRIDAASSFKGY 461
Query: 516 DTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
+ L A V++L VNG+ V +S G D ++L+ TPFY ESGGQ+GD G L +G N
Sbjct: 462 EQLDLTATVKALFVNGEAVDALSAGQDAVIVLDETPFYGESGGQVGDTGEL---KGNN-- 516
Query: 576 TAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAAL 635
A+ V+D +K G H G + G L VG +EA+VD R R +++H+ATHLL AAL
Sbjct: 517 -ALFSVQDTQK-YGQAIGHIGKLSSGQLRVGDRLEAVVDEARRARIRLNHSATHLLHAAL 574
Query: 636 KKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALD 695
++V+G+ +Q GSLV LRFDF+ + E+ ++E ++N I ++T+VM L+
Sbjct: 575 RQVLGEHVAQKGSLVNDKYLRFDFSHFEAMKPQEIRQVEDIVNAQIRRNLPVETRVMDLE 634
Query: 696 DAKRAGAIAMFGEKYGEQVKI 716
AK GA+A+FGEKY +QV++
Sbjct: 635 AAKAKGAMALFGEKYDQQVRV 655
>gi|402305108|ref|ZP_10824167.1| alanine--tRNA ligase [Haemophilus sputorum HK 2154]
gi|400376221|gb|EJP29108.1| alanine--tRNA ligase [Haemophilus sputorum HK 2154]
Length = 874
Score = 567 bits (1462), Expect = e-159, Method: Compositional matrix adjust.
Identities = 303/681 (44%), Positives = 434/681 (63%), Gaps = 50/681 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH V+ S+SLVPE DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 7 IRQSFLDFFHSKGHTVVESSSLVPENDPTLLFTNAGMNQFKDVFLGNEKRPYTRATTAQR 66
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEM+GNFSFGDYFK++AI++ WE+ T GLP +
Sbjct: 67 CVRAGGKHNDLENVGYTARHHTFFEMMGNFSFGDYFKQDAIKFGWEYLTSPQWLGLPKEK 126
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
L+++VYE DDEA+ IW+ EVGVP EHI R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 127 LYVTVYETDDEAYNIWHDEVGVPSEHIIRIGDNKGAPYASDNFWAMGDTGPCGPCTEIFY 186
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D RFIE +N+VFMQ+N+ DG++E L + ++DTG+GLER+
Sbjct: 187 D-HGDHIWGGLPGSPEEDGDRFIEVWNIVFMQFNRHADGTMEKLPKPSVDTGMGLERMTA 245
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NYE D+ +IK +EL +V+ D N +L++I DH+R+ YL++DGV P
Sbjct: 246 VLQHVNSNYEIDIFQTLIKTIAELLSVT-----DLNNKSLRVIADHIRSCAYLIADGVVP 300
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN GRGYV+RR+IRRAVR G +LG KG AF + ++ H + ++
Sbjct: 301 SNEGRGYVLRRIIRRAVRHGNILGAKG--------AFFYELVPTLAKVMGHAGEIISQKQ 352
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
I + LK EE +F +TLERG LL+ LA + +LSG+ AF LYDT+GFP
Sbjct: 353 AHIQKTLKAEEEQFARTLERGLALLEDELAKVTNN--------QLSGEVAFKLYDTYGFP 404
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGY 515
+++T +V E +++D KGF+ EM+ QR +++A+ N D ++ + T+F GY
Sbjct: 405 LDLTADVCRERNIAIDEKGFEAEMQAQRERAKASSNFGM----DYNNVIKVEGQTQFKGY 460
Query: 516 DTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
+TL+ A V +L NG+ V ++ G + V+L++T FY ESGGQ+GD G + + +
Sbjct: 461 ETLNTDATVVALFSNGESVNEIKSGENAVVILDQTTFYGESGGQVGDSGLI------SSE 514
Query: 576 TAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAAL 635
+V D +K G VF H G + G L+VG +V+A V+ + R ++H+ATHLL +AL
Sbjct: 515 ICNFQVNDTQK-YGQVFGHIGQLTSGSLKVGDKVKAEVEAQRRHAITLNHSATHLLHSAL 573
Query: 636 KKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALD 695
++V+G +Q GSLV LRFDF+ + +L EIER++N + + + + M ++
Sbjct: 574 REVLGNHVAQKGSLVNEQVLRFDFSQPEAINKAQLAEIERIVNRKVRENIQVVIEQMDIE 633
Query: 696 DAKRAGAIAMFGEKYGEQVKI 716
AK GA+A+FGEKYG+ V++
Sbjct: 634 SAKAKGAMALFGEKYGDVVRV 654
>gi|323496144|ref|ZP_08101204.1| alanyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
gi|323318888|gb|EGA71839.1| alanyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
Length = 860
Score = 567 bits (1462), Expect = e-159, Method: Compositional matrix adjust.
Identities = 310/686 (45%), Positives = 427/686 (62%), Gaps = 49/686 (7%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S D +R FL F+ S+GH+++ S+SLVP DPT+L T AGM QFK FLG R RA
Sbjct: 4 STDEVRNAFLKFFESKGHQIVDSSSLVPHNDPTLLFTNAGMNQFKDCFLGAEKRAYTRAT 63
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
T+QRC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI +AWEF T LP
Sbjct: 64 TAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIAFAWEFLTETLQLPK 123
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG--------ADDNFWNSGATGPCGPCSE 215
+RL ++VYE DDEAF+IWNK+VGVP + I R+G DNFW G TGPCGPC+E
Sbjct: 124 DRLLVTVYETDDEAFDIWNKKVGVPADRIVRIGDKEGGKQFESDNFWTMGDTGPCGPCTE 183
Query: 216 IYYDF--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERI 273
I+YD H G D RFIE +N VFMQ+N+ DG++EPL + +DTG+G+ERI
Sbjct: 184 IFYDHGEHIWGGRPGTPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPAVDTGMGIERI 243
Query: 274 ARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGV 333
+ I+Q V +NYE D+ +IK +E+ D +N +L++I DH+R+ +L++DGV
Sbjct: 244 SAIMQGVHSNYEIDVFQKLIKATAEIVG-----HEDLSNQSLRVIADHIRSCSFLIADGV 298
Query: 334 FPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKA 393
PSN GRGYV+RR+IRRAVR G LG +G L G + EL
Sbjct: 299 MPSNEGRGYVLRRIIRRAVRHGNKLGAQGVFFHKLVGVLAEVMGSAGEELK--------- 349
Query: 394 REQRILEELKR-EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTF 452
++Q ++E++ R EE F +TLERG +L++ L DAL L G+ F LYDT+
Sbjct: 350 KQQAVVEKVLRIEEENFGRTLERGMVILNEAL-DALEG-------KELDGETVFKLYDTY 401
Query: 453 GFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEF 512
GFP ++T +VA E ++D +GF+ ME QR Q A A + D +A + + TEF
Sbjct: 402 GFPADLTNDVAREREFTIDEEGFEKAMEEQR---QRAREAGQFGTDYNATIKTE-EQTEF 457
Query: 513 LGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGT 572
GY K+ V + V G+ +S G ++L TPFYAESGGQ GD G L G
Sbjct: 458 CGYTGTQGKSNVAEIFVEGEAAGSLSAGDKAIIILGETPFYAESGGQCGDAGVLKTESG- 516
Query: 573 NQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQ 632
V +V+D +K LG+ H G + EGVL G +VEA+VD + R ++H+ATHLL
Sbjct: 517 -----VFKVEDTQK-LGNAIAHHGVLAEGVLAKGDDVEAVVDAERRAAISLNHSATHLLH 570
Query: 633 AALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVM 692
AAL+KV+G+ +Q GSLV + LRFDF+ + EL+E+ERL+N + ++++T VM
Sbjct: 571 AALRKVLGEHVTQKGSLVKPENLRFDFSHLEAVTPAELKEVERLVNAQVRHNHVIETNVM 630
Query: 693 ALDDAKRAGAIAMFGEKYGEQVKISS 718
++ AK+ GA+A+FGEKY ++V++ S
Sbjct: 631 DIESAKQKGAMALFGEKYDDEVRVLS 656
>gi|421145267|ref|ZP_15605153.1| alanyl-tRNA ligase [Fusobacterium nucleatum subsp. fusiforme ATCC
51190]
gi|395488332|gb|EJG09201.1| alanyl-tRNA ligase [Fusobacterium nucleatum subsp. fusiforme ATCC
51190]
Length = 867
Score = 567 bits (1462), Expect = e-159, Method: Compositional matrix adjust.
Identities = 293/674 (43%), Positives = 437/674 (64%), Gaps = 35/674 (5%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
+G+ IR++F++F+ + HK SASL+P+DPT+LLT+AGM+ FKP FLG+ PR T
Sbjct: 3 TGNEIREKFIEFFMQKQHKHFESASLIPDDPTLLLTVAGMVPFKPYFLGQKEAPCPRVTT 62
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
Q+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFKKEAI+W+WEF T + ++LW+
Sbjct: 63 YQKCIRTNDLENVGRTARHHTFFEMLGNFSFGDYFKKEAIKWSWEFVTEVLKINKDKLWV 122
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYD----FHPDR 224
+V+ DDEA +IW +E P E I RMG +N+W++G TG CGPCSEI+ D + D
Sbjct: 123 TVFTTDDEAEKIWIEECNFPKERIVRMGESENWWSAGPTGSCGPCSEIHVDLGVQYGGDE 182
Query: 225 GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNY 284
D G D RFIE +NLVF ++N+ +DGSLEPL +KNIDTG GLERIA ++Q NN+
Sbjct: 183 NSKIGDEGTDNRFIEIWNLVFTEWNRMEDGSLEPLPKKNIDTGAGLERIAAVVQGKTNNF 242
Query: 285 ETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVV 344
ETDL+FPI+++A+++ Y + N T+ +LK+I DH RA+ +L++DGV PSN GRGY++
Sbjct: 243 ETDLLFPILEEAAKITGSQYGK-NSETDFSLKVITDHARAVTFLINDGVIPSNEGRGYIL 301
Query: 345 RRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKR 404
RR++RRAVR GRLLG K F+ + +K +E D+K I + +K
Sbjct: 302 RRILRRAVRHGRLLGYK--------DLFMYKMVDKVVEKFEVAYPDLKKNLGNIRKIVKI 353
Query: 405 EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAE 464
EE +F TL++G +L++Q + + L+ + +L G+ +F LYDT+GFP E+T+E+AE
Sbjct: 354 EEEKFSNTLDQGIQLVNQEIDNLLANGKN-----KLDGEISFKLYDTYGFPYELTEEIAE 408
Query: 465 EHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDS--ADLAEKIPDTEFLGYDTLSAKA 522
E G++V + F+ +ME Q+ ++++A V DS + +K T+F GY+ K
Sbjct: 409 ERGITVLREEFEAKMEEQKEKARSAREVVMEKGQDSFIEEFYDKYGVTKFTGYE----KT 464
Query: 523 IVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVK 582
E L+N ++ +K ++ ++TPFYAESGGQ+GD G +Y V +V
Sbjct: 465 EDEGKLLN----LRETKDGKYLLIFDKTPFYAESGGQVGDQGKIY------SDNFVGKVL 514
Query: 583 DVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQE 642
DV+K +F+H +G+ E + + +VD R +HTATHLL AL++V+G
Sbjct: 515 DVQKQ-KDIFIHTVEFEKGIAEENKTYKLVVDVVRRLDTAKNHTATHLLHKALREVVGTH 573
Query: 643 TSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGA 702
QAGSLV ++LRFDF+ + L +L +IE ++N I + + ++++AK+ GA
Sbjct: 574 VQQAGSLVDPEKLRFDFSHYEALTAEKLSKIENIVNEKIREGIEVSISYHSIEEAKKLGA 633
Query: 703 IAMFGEKYGEQVKI 716
+ +FG+KYG++V++
Sbjct: 634 MMLFGDKYGDKVRV 647
>gi|269965244|ref|ZP_06179378.1| alanyl-tRNA synthetase [Vibrio alginolyticus 40B]
gi|269830230|gb|EEZ84457.1| alanyl-tRNA synthetase [Vibrio alginolyticus 40B]
Length = 860
Score = 567 bits (1462), Expect = e-159, Method: Compositional matrix adjust.
Identities = 316/687 (45%), Positives = 431/687 (62%), Gaps = 51/687 (7%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S D +R FL F+ S+GH+++ S+SLVP DPT+L T AGM QFK FLG R RA
Sbjct: 4 STDEVRNAFLKFFESKGHQIVESSSLVPHNDPTLLFTNAGMNQFKDCFLGLEKRAYTRAT 63
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
T+QRC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI +AWEF T LPA
Sbjct: 64 TAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAISFAWEFLTEVLKLPA 123
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG--------ADDNFWNSGATGPCGPCSE 215
+RL ++VYE DDEAF+IWNK+VGVP + I R+G DNFW G TGPCGPC+E
Sbjct: 124 DRLLVTVYETDDEAFDIWNKKVGVPADRIVRIGDKEGGKPYESDNFWQMGDTGPCGPCTE 183
Query: 216 IYYDF--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERI 273
I+YD H G D RFIE +N VFMQ+N+ DG++EPL + ++DTG+G+ERI
Sbjct: 184 IFYDHGEHIWGGRPGTPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPSVDTGMGIERI 243
Query: 274 ARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGV 333
+ I+Q V +NYE D+ +IK A+E+ + Y D +N +L++I DH+R+ +L+ DGV
Sbjct: 244 SAIMQGVHSNYEIDVFQALIKAAAEV--IGY---EDLSNQSLRVIADHIRSCSFLIVDGV 298
Query: 334 FPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKA 393
PSN GRGYV+RR+IRRAVR G LG +G L G + EL
Sbjct: 299 MPSNEGRGYVLRRIIRRAVRHGNKLGAQGAFFHKLVGVLADIMGTAGEELK--------- 349
Query: 394 REQRILEELKR-EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTF 452
R+Q ++E++ R EE F +TLERG +L++ L D L G V L G+ F LYDT+
Sbjct: 350 RQQAVVEKVLRIEEENFGRTLERGMAILNEAL-DNL-----DGKV--LDGETVFKLYDTY 401
Query: 453 GFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKI-PDTE 511
GFP ++T +VA E ++D +GF+ ME QR++++ A N D +A A K+ TE
Sbjct: 402 GFPADLTNDVAREREFAIDEEGFEKAMEEQRQRAREAGN---FGTDYNA--AIKVDTQTE 456
Query: 512 FLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQG 571
F GY + V ++ V G V +S G ++L TPFYAESGGQ GD G + G
Sbjct: 457 FCGYTATKGSSSVAAMFVEGNEVDSLSAGDKAIIVLGETPFYAESGGQCGDAGEIRTESG 516
Query: 572 TNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLL 631
V V+D +K LG+ H G + EGVL G EV IVD + R ++H+ATHLL
Sbjct: 517 ------VFHVEDTQK-LGNAIAHHGVMAEGVLAKGDEVATIVDAERRAAISLNHSATHLL 569
Query: 632 QAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKV 691
AAL++V+G+ +Q GSLV D LRFDF+ + EL+E+ERL+N I + ++T V
Sbjct: 570 HAALRQVLGEHVTQKGSLVKADNLRFDFSHLEAVTAAELKEVERLVNAQIRRNHTIETNV 629
Query: 692 MALDDAKRAGAIAMFGEKYGEQVKISS 718
M ++ AK+ GA+A+FGEKY ++V++ S
Sbjct: 630 MDIESAKKKGAMALFGEKYDDEVRVLS 656
>gi|424034008|ref|ZP_17773418.1| alanine--tRNA ligase [Vibrio cholerae HENC-01]
gi|408873752|gb|EKM12941.1| alanine--tRNA ligase [Vibrio cholerae HENC-01]
Length = 860
Score = 567 bits (1462), Expect = e-159, Method: Compositional matrix adjust.
Identities = 316/687 (45%), Positives = 434/687 (63%), Gaps = 51/687 (7%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S D +R FL F+ S+GH+++ S+SLVP DPT+L T AGM QFK FLG R RA
Sbjct: 4 STDEVRNAFLKFFESKGHQIVESSSLVPHNDPTLLFTNAGMNQFKDCFLGLEKRAYTRAT 63
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
T+QRC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI +AWEF T LPA
Sbjct: 64 TAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAISFAWEFLTETLKLPA 123
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG--------ADDNFWNSGATGPCGPCSE 215
+RL ++VYE DDEAF+IWNK+VGVP + I R+G DNFW G TGPCGPC+E
Sbjct: 124 DRLLVTVYETDDEAFDIWNKKVGVPADRIIRIGDKKGGKPYESDNFWQMGDTGPCGPCTE 183
Query: 216 IYYDF--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERI 273
I+YD H G D RFIE +N VFMQ+N+ DG++EPL + ++DTG+G+ERI
Sbjct: 184 IFYDHGEHIWGGRPGTPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPSVDTGMGIERI 243
Query: 274 ARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGV 333
+ I+Q V +NYE D+ +IK A+E+ + Y D +N +L++I DH+R+ +L+ DGV
Sbjct: 244 SAIMQGVHSNYEIDVFQALIKAAAEV--IGY---EDLSNQSLRVIADHIRSCSFLIVDGV 298
Query: 334 FPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKA 393
PSN GRGYV+RR+IRRAVR G LG +GAF + E+ ++K
Sbjct: 299 MPSNEGRGYVLRRIIRRAVRHGNKLGA--------QGAFFHKLVGVLAEIMGTAGEELK- 349
Query: 394 REQRILEELKR-EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTF 452
R+Q ++E++ R EE F +TLERG +L++ L D L G V L G+ F LYDT+
Sbjct: 350 RQQAVVEKVLRIEEENFGRTLERGMAILNEAL-DNL-----DGKV--LDGETVFKLYDTY 401
Query: 453 GFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKI-PDTE 511
GFP ++T +VA E ++D +GF+ ME QR++++ A N D +A A K+ TE
Sbjct: 402 GFPADLTNDVAREREFAIDEEGFEKAMEEQRQRAREAGN---FGTDYNA--AIKVDTQTE 456
Query: 512 FLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQG 571
F GY + V ++ V G V +S G ++L TPFYAESGGQ GD G + G
Sbjct: 457 FCGYAGTKGSSSVAAMFVEGNEVESLSAGDKAIIVLGETPFYAESGGQCGDAGEIRTESG 516
Query: 572 TNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLL 631
V V+D +K LG+ H G + EGVL G EV IVD + R ++H+ATHLL
Sbjct: 517 ------VFRVEDTQK-LGNAMAHHGVMAEGVLAKGDEVATIVDAERRAAISLNHSATHLL 569
Query: 632 QAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKV 691
AAL++V+G+ +Q GSLV D LRFDF+ + EL+E+ERL+N I + ++T V
Sbjct: 570 HAALRQVLGEHVTQKGSLVKADSLRFDFSHLEAVTAAELKEVERLVNAQIRRNHTIETNV 629
Query: 692 MALDDAKRAGAIAMFGEKYGEQVKISS 718
M ++ AK+ GA+A+FGEKY ++V++ S
Sbjct: 630 MDIESAKKKGAMALFGEKYDDEVRVLS 656
>gi|320155348|ref|YP_004187727.1| alanyl-tRNA synthetase [Vibrio vulnificus MO6-24/O]
gi|319930660|gb|ADV85524.1| alanyl-tRNA synthetase [Vibrio vulnificus MO6-24/O]
Length = 860
Score = 567 bits (1462), Expect = e-159, Method: Compositional matrix adjust.
Identities = 307/686 (44%), Positives = 427/686 (62%), Gaps = 49/686 (7%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S D +R FL F+ S+GH+++ S+SLVP DPT+L T AGM QFK FLG R RA
Sbjct: 4 STDEVRNAFLKFFESKGHQIVDSSSLVPHNDPTLLFTNAGMNQFKDCFLGAEKRAYTRAT 63
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
T+QRC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI +AWEF T LP
Sbjct: 64 TAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIAFAWEFLTETLKLPK 123
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG--------ADDNFWNSGATGPCGPCSE 215
+RL ++VYE DDEAF+IWN++VGVP + I R+G DNFW G TGPCGPC+E
Sbjct: 124 DRLLVTVYETDDEAFDIWNQKVGVPADRIIRIGDKKGGKQYESDNFWTMGDTGPCGPCTE 183
Query: 216 IYYDF--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERI 273
I+YD H G D RFIE +N VFMQ+N+ DG++EPL + ++DTG+G+ERI
Sbjct: 184 IFYDHGEHIWGGRPGTPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPSVDTGMGIERI 243
Query: 274 ARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGV 333
+ I+Q V +NYE D+ +IK +E+ D +N +L++I DH+R+ +L++DGV
Sbjct: 244 SAIMQGVHSNYEIDVFQKLIKATAEIVGCE-----DLSNQSLRVIADHIRSCSFLIADGV 298
Query: 334 FPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKA 393
PSN GRGYV+RR+IRRAVR G LG +G L G + A EL
Sbjct: 299 MPSNEGRGYVLRRIIRRAVRHGNKLGAQGVFFHKLVGVLAEVMGSAADELK--------- 349
Query: 394 REQRILEELKR-EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTF 452
++Q ++E++ R EE F +TLERG +L++ L DAL L G+ F LYDT+
Sbjct: 350 KQQAVVEKVLRIEEENFGRTLERGMVILNEAL-DALEG-------KELDGETVFKLYDTY 401
Query: 453 GFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEF 512
GFP ++T +VA E ++D GF+ ME QR Q A A + D +A + + +TEF
Sbjct: 402 GFPADLTNDVARERDFTIDEAGFEKAMEEQR---QRAREAGQFGTDYNAKIKTE-SETEF 457
Query: 513 LGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGT 572
GY ++V + V G+ +S G ++L TPFYAESGGQ GD G L G
Sbjct: 458 CGYTGTQGNSVVAEIFVEGEAADSLSAGDKAIIILGETPFYAESGGQCGDSGVLKTESG- 516
Query: 573 NQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQ 632
+ +V+D +K LG+ H G + EGVL G +V AIVD + R ++H+ATHLL
Sbjct: 517 -----LFQVEDTQK-LGNAIAHHGVLVEGVLAKGDQVSAIVDAERRAAISLNHSATHLLH 570
Query: 633 AALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVM 692
AAL++V+G+ +Q GSLV + LRFDF+ + EL+E+ERL+N I + ++T +M
Sbjct: 571 AALRQVLGEHVAQKGSLVKAENLRFDFSHLEAVTAAELKEVERLVNAQIRRNHAIETNIM 630
Query: 693 ALDDAKRAGAIAMFGEKYGEQVKISS 718
++ AK+ GA+A+FGEKY ++V++ S
Sbjct: 631 DIESAKQKGAMALFGEKYDDEVRVLS 656
>gi|163802982|ref|ZP_02196869.1| alanyl-tRNA synthetase [Vibrio sp. AND4]
gi|159173272|gb|EDP58100.1| alanyl-tRNA synthetase [Vibrio sp. AND4]
Length = 865
Score = 567 bits (1462), Expect = e-159, Method: Compositional matrix adjust.
Identities = 312/687 (45%), Positives = 434/687 (63%), Gaps = 46/687 (6%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S D +R FL F+ S+GH+++ S+SLVP DPT+L T AGM QFK FLG R RA
Sbjct: 4 STDEVRNAFLKFFESKGHQIVESSSLVPHNDPTLLFTNAGMNQFKDCFLGLEKRAYTRAT 63
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
T+QRC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI +AWEF T LPA
Sbjct: 64 TAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIAFAWEFLTKTLKLPA 123
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG--------ADDNFWNSGATGPCGPCSE 215
+RL +++YE DDEAF+IWNK+VGVP + I R+G DNFW G TGPCGPC+E
Sbjct: 124 DRLLVTIYETDDEAFDIWNKKVGVPADRIIRIGDKKGGKPFESDNFWQMGDTGPCGPCTE 183
Query: 216 IYYDF--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERI 273
I+YD H G D RFIE +N VFMQ+N++ DG++EPL + ++DTG+G+ERI
Sbjct: 184 IFYDHGEHIWGGRPGTPEEDGDRFIEIWNNVFMQFNRQADGTMEPLPKPSVDTGMGIERI 243
Query: 274 ARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGV 333
+ I+Q V +NYE D+ +IK A+E+ + Y D +N +L++I DH+R+ +L+ DGV
Sbjct: 244 SAIMQGVHSNYEIDVFQALIKAAAEV--IGY---EDLSNQSLRVIADHIRSCSFLIVDGV 298
Query: 334 FPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKA 393
PSN GRGYV+RR+IRRAVR G LG +GAF + E+ ++K
Sbjct: 299 MPSNEGRGYVLRRIIRRAVRHGNKLGA--------QGAFFHKLVGVLAEIMGTAGEELK- 349
Query: 394 REQRILEELKR-EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTF 452
R+Q ++E++ R EE F +TLERG +L++ L D +S G V L G+ F LYDT+
Sbjct: 350 RQQAVVEKVLRIEEENFGRTLERGMAILNEAL-DNISSQGTDGKV--LDGETVFKLYDTY 406
Query: 453 GFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKI-PDTE 511
GFP ++T +VA E +D +GF+ ME QR++++ A N D +A A K+ TE
Sbjct: 407 GFPADLTNDVAREREFVIDEEGFEKAMEEQRQRAREAGN---FGTDYNA--AIKVDAQTE 461
Query: 512 FLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQG 571
F GY + V ++ V G V +S G ++L TPFYAESGGQ GD G + G
Sbjct: 462 FCGYTGTKGSSSVAAMFVEGNEVASLSAGDKAIIVLGETPFYAESGGQCGDAGEIRTESG 521
Query: 572 TNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLL 631
V V+D +K LG+ H G + EGVL EV IVD + R ++H+ATHLL
Sbjct: 522 ------VFRVEDTQK-LGNAIAHHGIMAEGVLAKDDEVATIVDAERRAAISLNHSATHLL 574
Query: 632 QAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKV 691
AAL++++G+ +Q GSLV D LRFDF+ + EL+E+ERL+N + + ++T V
Sbjct: 575 HAALRQLLGEHVTQKGSLVKADGLRFDFSHLEAVTAAELKEVERLVNAQVRRNHTIETNV 634
Query: 692 MALDDAKRAGAIAMFGEKYGEQVKISS 718
M ++ AK+ GA+A+FGEKY ++V++ S
Sbjct: 635 MDIESAKKKGAMALFGEKYDDEVRVLS 661
>gi|365540861|ref|ZP_09366036.1| alanyl-tRNA synthetase [Vibrio ordalii ATCC 33509]
Length = 860
Score = 567 bits (1462), Expect = e-159, Method: Compositional matrix adjust.
Identities = 309/689 (44%), Positives = 435/689 (63%), Gaps = 55/689 (7%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S D +R+ FL F+ S+GH+++ S+SLVP DPT+L T AGM QFK FLG R RA
Sbjct: 4 STDEVRRAFLSFFESKGHQIVDSSSLVPANDPTLLFTNAGMNQFKDCFLGLEKRAYTRAT 63
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
T+QRC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI +AWEF TV LPA
Sbjct: 64 TAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIAYAWEFLTVTLKLPA 123
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG--------ADDNFWNSGATGPCGPCSE 215
+RL ++VYE DDEAF+IWNK+VG+P E I R+G DNFW G TGPCGPC+E
Sbjct: 124 DRLLVTVYETDDEAFDIWNKKVGIPAERIIRIGDKPGGKAYESDNFWQMGDTGPCGPCTE 183
Query: 216 IYYDFHPDR------GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLG 269
I+YD H D G ++ D GD RFIE +N VFMQ+N+ DG +EPL + ++DTG+G
Sbjct: 184 IFYD-HGDHIWGGPPGSAEED-GD--RFIEIWNNVFMQFNRHADGKMEPLPKPSVDTGMG 239
Query: 270 LERIARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLL 329
+ERI+ I+Q V +NYE D+ +IK A+++ +D +N +L+++ DH+R+ +L+
Sbjct: 240 IERISAIMQGVHSNYEIDVFQALIKAAADVTGY-----DDLSNQSLRVVADHIRSCAFLI 294
Query: 330 SDGVFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDS 389
DGV PSN GRGYV+RR+IRRAVR G LG +GAF + ++
Sbjct: 295 VDGVMPSNEGRGYVLRRIIRRAVRHGNKLGA--------QGAFFHKLVGPLAQVMGTAGE 346
Query: 390 DVKAREQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLY 449
++K ++ + + L+ EE F +TLERG +L+ DAL GSV L G+ F LY
Sbjct: 347 ELKKQQALVEKVLRIEEENFGRTLERGMAILN----DALDNLE--GSV--LDGETVFKLY 398
Query: 450 DTFGFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPD 509
DT+GFP ++T +VA E +++D +GF+ ME QR Q A A + D +A + + +
Sbjct: 399 DTYGFPADLTNDVARERELTIDEQGFEKAMEEQR---QRAREAGQFGTDYNA-IIKVDTN 454
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
T F GY ++ + ++ V+G V +S G ++L TPFYAESGGQ GD G +
Sbjct: 455 TAFCGYSATQGESRIAAMFVDGNEVDTLSAGDKAILILGETPFYAESGGQCGDAGVIQTA 514
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
T + +V D +K LG+ H G + EGVL G E +AIVD K R ++H+ATH
Sbjct: 515 ------TGLFKVADTQK-LGNAIAHHGELIEGVLAKGDEAKAIVDAKRRAAISLNHSATH 567
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
LL AAL++V+G +Q GSLV + LRFDF+ + EL+E+ERL+N I + ++T
Sbjct: 568 LLHAALRQVLGSHVAQKGSLVKAESLRFDFSHLEAMTPAELKEVERLVNAQIRRNHTIET 627
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M ++ AK GA+A+FGEKY ++V++ S
Sbjct: 628 NIMDIEAAKAKGAMALFGEKYDDEVRVLS 656
>gi|94309776|ref|YP_582986.1| alanyl-tRNA synthetase [Cupriavidus metallidurans CH34]
gi|93353628|gb|ABF07717.1| alanyl-tRNA synthetase [Cupriavidus metallidurans CH34]
Length = 884
Score = 567 bits (1462), Expect = e-159, Method: Compositional matrix adjust.
Identities = 313/681 (45%), Positives = 421/681 (61%), Gaps = 44/681 (6%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR +FL F+ S+GH V+ S+SLVP DPT+L T +GM+QFK +FLG R RA +SQR
Sbjct: 16 IRSKFLQFFESKGHTVVRSSSLVPANDPTLLFTNSGMVQFKDVFLGTDKRPYVRATSSQR 75
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK+EAIQ+AWE T + LPA++LW
Sbjct: 76 SVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKREAIQYAWELLTKVYQLPADKLW 135
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYYDF 220
++VY +DDEA++IW KEVGVP + I R+G A DNFW TGPCGPCSEI+YD
Sbjct: 136 VTVYAEDDEAYDIWAKEVGVPADRIVRIGDNKGARYASDNFWQMADTGPCGPCSEIFYDH 195
Query: 221 HPD--RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQ 278
PD G D R+IE +NLVFMQ+N+ + G++ PL + +DTG+GLERIA +LQ
Sbjct: 196 GPDVWGGPPGSPEEDGDRYIEIWNLVFMQFNRDEQGTMTPLPKPCVDTGMGLERIAAVLQ 255
Query: 279 KVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNI 338
V +NYE DL +IK A +++ N +LK+I DH+RA +L+ DGV P N
Sbjct: 256 HVHSNYEIDLFQALIKGAGRETHIADLNQN-----SLKVIADHIRACSFLIVDGVIPGNE 310
Query: 339 GRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRI 398
GRGYV+RR++RRA+R G LG K L G + + E EL+ + R+
Sbjct: 311 GRGYVLRRIVRRAIRHGYKLGQKTPFFHKLVGDLVAQMGEAYPELAE--------AQSRV 362
Query: 399 LEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEI 458
+E LK EE RF +T+E G +LD +AD ++ G V L G+ AF L+DTFGFP+++
Sbjct: 363 VEVLKAEEERFFETIENGMSILDAAVADLKAK---GGKV--LDGELAFKLHDTFGFPLDL 417
Query: 459 TKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTL 518
T++VA E ++VD FD M QR Q++AA K+ +A L T F GYD L
Sbjct: 418 TQDVAREQEITVDEAAFDAAMTRQREQARAA-GKFKM----AAGLEYSGEKTVFHGYDAL 472
Query: 519 SAKAI-VESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTA 577
S + V +L V+G V + G V+L+ TPFYAESGGQ+GD G L A
Sbjct: 473 SMDGVRVTALYVDGASVDTMQPGQSGVVVLDNTPFYAESGGQVGDQGTLV------SGPA 526
Query: 578 VVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKK 637
V V D K VF H+GT+ G L+VG V A VD R R +H+ATHL+ AL++
Sbjct: 527 VFAVADTTKIQSDVFGHQGTLANGALKVGDTVAAQVDAVRRARTVRNHSATHLMHKALRE 586
Query: 638 VIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDA 697
V+G Q GSLV D+ RFDF+ + PL D ++ +IE ++N I +VM DDA
Sbjct: 587 VLGTHVQQKGSLVDPDKTRFDFSHNAPLTDAQIRQIEEIVNAEILSNAPTVAQVMPFDDA 646
Query: 698 KRAGAIAMFGEKYGEQVKISS 718
++GA+A+FGEKY + V++ S
Sbjct: 647 VKSGAMALFGEKYADDVRVLS 667
>gi|392960846|ref|ZP_10326311.1| alanyl-tRNA synthetase [Pelosinus fermentans DSM 17108]
gi|421054396|ref|ZP_15517364.1| alanyl-tRNA synthetase [Pelosinus fermentans B4]
gi|421071257|ref|ZP_15532377.1| alanyl-tRNA synthetase [Pelosinus fermentans A11]
gi|392440754|gb|EIW18414.1| alanyl-tRNA synthetase [Pelosinus fermentans B4]
gi|392447173|gb|EIW24427.1| alanyl-tRNA synthetase [Pelosinus fermentans A11]
gi|392454743|gb|EIW31565.1| alanyl-tRNA synthetase [Pelosinus fermentans DSM 17108]
Length = 872
Score = 567 bits (1462), Expect = e-159, Method: Compositional matrix adjust.
Identities = 310/673 (46%), Positives = 430/673 (63%), Gaps = 40/673 (5%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
SG+ +RK+FLDF+ S+ H +L S L+PE DPT+LL AGM FKP F GK+ PR +
Sbjct: 5 SGNELRKKFLDFFKSKDHLILQSYPLIPENDPTLLLVGAGMAPFKPFFTGKMNPPHPRIS 64
Query: 108 TSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
TSQ+C+RT D+ENVGRT+RHHTFFEMLGNFSFGDYFKKEAI WAWEF T +P ++LW
Sbjct: 65 TSQKCVRTGDIENVGRTARHHTFFEMLGNFSFGDYFKKEAIAWAWEFITEHLEMPKDKLW 124
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGC- 226
I+++ +DDEAF IW+ ++ +P + I RM DNFW G GPCGPCSEIY+D +RGC
Sbjct: 125 ITIHTEDDEAFAIWHNDIHIPADRIIRMA--DNFWEIGP-GPCGPCSEIYFDLGEERGCN 181
Query: 227 -SDVDLGDDT-RFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNY 284
SD +G D RF+E +NLVF QY++ + G+ PL +KNIDTG GLERIA +LQ +N+
Sbjct: 182 KSDCAVGCDCDRFLEIWNLVFTQYDRDEAGNYTPLAKKNIDTGAGLERIASVLQNKRSNF 241
Query: 285 ETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVV 344
ETDL+FP+I+ A+++ANV Y SN +T+++LK+I DH+R++ ++ DG+ PSN GRGYV+
Sbjct: 242 ETDLLFPLIEHAAKVANVEYG-SNSKTDISLKVIADHIRSMTVMIGDGILPSNEGRGYVL 300
Query: 345 RRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKR 404
RR++RRAVR RLLGI E FL + + + D+ ++ I + ++
Sbjct: 301 RRILRRAVRHARLLGI--------EKIFLVPMVDIVNTIFAEAYPDLVEKQSYIKKVIQL 352
Query: 405 EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAE 464
EE RF TL +G +LL+ + + +E ++ L G AF LYDTFGFP E+T E+ E
Sbjct: 353 EEERFQTTLVQGMELLN----GHIQKLKEL-NISELDGATAFKLYDTFGFPWELTLEILE 407
Query: 465 EHGVSVDMKGFDIEMENQRRQSQAAH--NAVKLSVDDSADLAEKIPDTEFLGYDTLSAKA 522
EH + +D FD M+ QR +++AA + +L + D + L +TE L D +
Sbjct: 408 EHDMQLDKPNFDSAMKEQRERARAARQDHEDQLIIPDLSHL-----ETEKLIVDEHAENG 462
Query: 523 IVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVK 582
+ NG +V G DV +L+ T F+AE GGQIGD GFL + G + TA
Sbjct: 463 NIILAWKNGILADEVHDGEDVAFILDVTSFHAEGGGQIGDTGFLESSLGKMKITA----- 517
Query: 583 DVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQE 642
KK + H G + EG+ VG V+ VD R+ +HTATHLL AALK+V+G
Sbjct: 518 -TKKLVNGTTYHVGNVTEGLFRVGDLVKLKVDDNRRRDIARNHTATHLLHAALKQVLGTH 576
Query: 643 TSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGD---ANLLQTKVMALDDAKR 699
+Q+GSLV+ +RLRFDF+ + +L EIE+L+N I + +++TK D AK
Sbjct: 577 VNQSGSLVSSERLRFDFSHFSQVTSEQLLEIEKLVNHAILENISVTIVETK---QDKAKE 633
Query: 700 AGAIAMFGEKYGE 712
GA+A+FGEKYGE
Sbjct: 634 MGAVALFGEKYGE 646
>gi|397906500|ref|ZP_10507300.1| Alanyl-tRNA synthetase [Caloramator australicus RC3]
gi|397160457|emb|CCJ34637.1| Alanyl-tRNA synthetase [Caloramator australicus RC3]
Length = 878
Score = 567 bits (1462), Expect = e-159, Method: Compositional matrix adjust.
Identities = 313/676 (46%), Positives = 443/676 (65%), Gaps = 35/676 (5%)
Query: 51 DSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVP---RA 106
+ IR+++L F+ +GH LPS SL+P+ D ++LL AGM KP F G+ +VP R
Sbjct: 7 NEIREKYLSFFEGKGHLRLPSFSLIPKNDKSLLLINAGMAPLKPYFTGQ---EVPPNRRI 63
Query: 107 ATSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRL 166
T Q+CIRT D+E VG+T+RH TFFEMLGNFSFGDYFK+E I WAWEF T LP RL
Sbjct: 64 TTCQKCIRTGDIERVGKTARHATFFEMLGNFSFGDYFKEEVIPWAWEFVTEVLKLPKERL 123
Query: 167 WISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGC 226
WI++Y+DDDEAFEIWNK+VG+P E I RMG +DNFW G GPCGPCSEIY+D D+GC
Sbjct: 124 WITIYQDDDEAFEIWNKKVGIPAERIVRMGKEDNFWEIG-VGPCGPCSEIYFDRGEDKGC 182
Query: 227 SDVDLG---DDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNN 283
G D RF+EF+NLVF Q++K ++G+ LK NIDTG+GLERIA I+Q V +
Sbjct: 183 GKPTCGVGCDCDRFVEFWNLVFTQFDKDEEGNYHRLKNPNIDTGMGLERIATIMQGVDSI 242
Query: 284 YETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYV 343
+E D + I+ K E+AN Y S+D+ +++++II DH+R++V+++SDGV PSN GRGYV
Sbjct: 243 FEIDTMKNILNKVCEVANYKYG-SDDKKDVSVRIITDHIRSVVFMVSDGVLPSNEGRGYV 301
Query: 344 VRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELK 403
+RRL+RRA R G+LLGI EGAFL I++ I+ S ++K ++ I + LK
Sbjct: 302 LRRLLRRAARHGKLLGI--------EGAFLWEISDVVIQNSKDAYPELKEKKDYIKKVLK 353
Query: 404 REELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVA 463
EE RF +T+++G +L+ + D L + ++ L G+ AF LYDT+GFP+E+T E+
Sbjct: 354 VEEERFDETIDQGMNILEAYI-DELKKENKN----ILDGEKAFKLYDTYGFPIELTLEIL 408
Query: 464 EEHGVSVDMKGFDIEMENQRRQSQAAH---NAVKLSVDDSADLAEKIPDTEFLGYDTLSA 520
+E G+ +D++GF+ EME Q+ +++AA N + +D L I +T F GY+ +
Sbjct: 409 QESGMDIDLEGFNREMEAQKERARAAREETNYMGTDIDVYMTLPADI-NTVFEGYNNTIS 467
Query: 521 KAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVE 580
+ V L+ +G V KG +VE++L+RT FYAE GGQ+GD G + +G + VE
Sbjct: 468 RGKVLVLVKDGNIVDYAEKGENVEIILDRTSFYAEMGGQVGDTGII---EGEGFK---VE 521
Query: 581 VKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIG 640
++D +K+ + VHKG + EG ++ G EV AIVD R +HTATHLL ALK V+G
Sbjct: 522 IEDTRKTANNKVVHKGKVIEGKIKKGSEVTAIVDKARRMDIARNHTATHLLHKALKDVLG 581
Query: 641 QETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRA 700
+QAGSLVA DRLRFDF + +L IE ++N I ++ ++T +D+A+R
Sbjct: 582 SHVNQAGSLVAPDRLRFDFTHFEAISSEDLRRIENIVNDKIMESLEVETIETTIDEARRM 641
Query: 701 GAIAMFGEKYGEQVKI 716
GA A+F EKY + V++
Sbjct: 642 GATALFDEKYADIVRV 657
>gi|205830252|sp|Q1LQ59.2|SYA_RALME RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
Length = 874
Score = 567 bits (1462), Expect = e-159, Method: Compositional matrix adjust.
Identities = 313/681 (45%), Positives = 421/681 (61%), Gaps = 44/681 (6%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR +FL F+ S+GH V+ S+SLVP DPT+L T +GM+QFK +FLG R RA +SQR
Sbjct: 6 IRSKFLQFFESKGHTVVRSSSLVPANDPTLLFTNSGMVQFKDVFLGTDKRPYVRATSSQR 65
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK+EAIQ+AWE T + LPA++LW
Sbjct: 66 SVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKREAIQYAWELLTKVYQLPADKLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYYDF 220
++VY +DDEA++IW KEVGVP + I R+G A DNFW TGPCGPCSEI+YD
Sbjct: 126 VTVYAEDDEAYDIWAKEVGVPADRIVRIGDNKGARYASDNFWQMADTGPCGPCSEIFYDH 185
Query: 221 HPD--RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQ 278
PD G D R+IE +NLVFMQ+N+ + G++ PL + +DTG+GLERIA +LQ
Sbjct: 186 GPDVWGGPPGSPEEDGDRYIEIWNLVFMQFNRDEQGTMTPLPKPCVDTGMGLERIAAVLQ 245
Query: 279 KVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNI 338
V +NYE DL +IK A +++ N +LK+I DH+RA +L+ DGV P N
Sbjct: 246 HVHSNYEIDLFQALIKGAGRETHIADLNQN-----SLKVIADHIRACSFLIVDGVIPGNE 300
Query: 339 GRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRI 398
GRGYV+RR++RRA+R G LG K L G + + E EL+ + R+
Sbjct: 301 GRGYVLRRIVRRAIRHGYKLGQKTPFFHKLVGDLVAQMGEAYPELAE--------AQSRV 352
Query: 399 LEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEI 458
+E LK EE RF +T+E G +LD +AD ++ G V L G+ AF L+DTFGFP+++
Sbjct: 353 VEVLKAEEERFFETIENGMSILDAAVADLKAK---GGKV--LDGELAFKLHDTFGFPLDL 407
Query: 459 TKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTL 518
T++VA E ++VD FD M QR Q++AA K+ +A L T F GYD L
Sbjct: 408 TQDVAREQEITVDEAAFDAAMTRQREQARAA-GKFKM----AAGLEYSGEKTVFHGYDAL 462
Query: 519 SAKAI-VESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTA 577
S + V +L V+G V + G V+L+ TPFYAESGGQ+GD G L A
Sbjct: 463 SMDGVRVTALYVDGASVDTMQPGQSGVVVLDNTPFYAESGGQVGDQGTLV------SGPA 516
Query: 578 VVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKK 637
V V D K VF H+GT+ G L+VG V A VD R R +H+ATHL+ AL++
Sbjct: 517 VFAVADTTKIQSDVFGHQGTLANGALKVGDTVAAQVDAVRRARTVRNHSATHLMHKALRE 576
Query: 638 VIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDA 697
V+G Q GSLV D+ RFDF+ + PL D ++ +IE ++N I +VM DDA
Sbjct: 577 VLGTHVQQKGSLVDPDKTRFDFSHNAPLTDAQIRQIEEIVNAEILSNAPTVAQVMPFDDA 636
Query: 698 KRAGAIAMFGEKYGEQVKISS 718
++GA+A+FGEKY + V++ S
Sbjct: 637 VKSGAMALFGEKYADDVRVLS 657
>gi|54310165|ref|YP_131185.1| alanyl-tRNA synthetase [Photobacterium profundum SS9]
gi|46914606|emb|CAG21383.1| putative alanyl-tRNA synthetase [Photobacterium profundum SS9]
Length = 906
Score = 567 bits (1461), Expect = e-159, Method: Compositional matrix adjust.
Identities = 311/691 (45%), Positives = 437/691 (63%), Gaps = 48/691 (6%)
Query: 44 QDFPS--SGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVP 100
QDFP S D IR+ FL F+ S+GH+++ S+SLVP DPT+L T AGM QFK FLG
Sbjct: 30 QDFPMYMSTDEIRRAFLAFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDTFLGIEK 89
Query: 101 RQVPRAATSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFST 156
R RA T+QRC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI++AWEF T
Sbjct: 90 RSYTRATTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKQDAIKYAWEFLT 149
Query: 157 VEFGLPANRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGP 209
GLP +RL +++YE DDEAF+IWNKE+G+P + I R+G A DNFW G TGP
Sbjct: 150 DVLGLPQDRLLVTIYETDDEAFDIWNKEMGIPADRIVRIGDNKGAPYASDNFWQMGDTGP 209
Query: 210 CGPCSEIYYDF--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTG 267
CGPCSEI+YD H G D RFIE +N VFMQ+N++ DG++EPL + ++DTG
Sbjct: 210 CGPCSEIFYDHGEHIWGGRPGTPEEDGDRFIEIWNNVFMQFNRQADGTMEPLPKPSVDTG 269
Query: 268 LGLERIARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVY 327
+G+ERIA I+Q V +NYE D+ +IKK++E+ + Y D +N +L+++ DH+R+ +
Sbjct: 270 MGIERIAAIMQGVHSNYEIDIFQTLIKKSAEV--IGY---EDLSNQSLRVVADHIRSCAF 324
Query: 328 LLSDGVFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHI 387
L+ DGV PSN GRGYV+RR+IRRAVR G LG GAF + E+
Sbjct: 325 LIVDGVMPSNEGRGYVLRRIIRRAVRHGNKLGAS--------GAFFYKLVGPLAEIMGTA 376
Query: 388 DSDVKAREQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFL 447
++K R+ + + LK EE F +TL+RG +L+ DAL S L G+ F
Sbjct: 377 GDELKKRQALVEKILKIEEDNFGRTLDRGLTILN----DALDNL----SGKELDGETVFK 428
Query: 448 LYDTFGFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKI 507
LYDT+GFP ++T +VA E ++D +GF+ ME QR Q A A K VD + + +
Sbjct: 429 LYDTYGFPADLTNDVARERDFTIDEEGFNNAMEAQR---QRAREAGKFGVDYNESIKVDV 485
Query: 508 PDTEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLY 567
+TEF GY +A++ + +L +G+ V + G D ++L+ TPFYAESGGQ GD G L
Sbjct: 486 -NTEFCGYTGTAAQSSIVALYRDGEAVDSILAGEDALIILDNTPFYAESGGQCGDAGVL- 543
Query: 568 VTQGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTA 627
+ V V D +K G+ H+G++ +G L VG ++EA VD R ++H+A
Sbjct: 544 -----TAENTVFNVSDTQK-FGAAIGHQGSLVQGALNVGDKLEAQVDVVRRTAITLNHSA 597
Query: 628 THLLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLL 687
THLL +AL+ ++G+ +Q GSLV D LRFDF+ + +L EIER++N I + +
Sbjct: 598 THLLHSALRNLLGEHVAQKGSLVKPDALRFDFSNLEAVKPEQLREIERVVNEQIRLNHSI 657
Query: 688 QTKVMALDDAKRAGAIAMFGEKYGEQVKISS 718
T +M ++ AK+ GA+A+FGEKY ++V++ S
Sbjct: 658 DTNIMDIESAKQKGAMALFGEKYDDEVRVLS 688
>gi|421074116|ref|ZP_15535157.1| alanyl-tRNA synthetase [Pelosinus fermentans JBW45]
gi|392527783|gb|EIW50868.1| alanyl-tRNA synthetase [Pelosinus fermentans JBW45]
Length = 872
Score = 567 bits (1461), Expect = e-159, Method: Compositional matrix adjust.
Identities = 312/676 (46%), Positives = 431/676 (63%), Gaps = 46/676 (6%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
SG+ +RK+FLDF+ S+ H +L S L+PE DPT+LL AGM FKP F GK+ PR +
Sbjct: 5 SGNELRKKFLDFFKSKDHLILQSYPLIPENDPTLLLVGAGMAPFKPFFTGKMNPPHPRIS 64
Query: 108 TSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
TSQ+C+RT D+ENVGRT+RHHTFFEMLGNFSFGDYFKKEAI WAWEF T +P ++LW
Sbjct: 65 TSQKCVRTGDIENVGRTARHHTFFEMLGNFSFGDYFKKEAIAWAWEFITEHLEMPKDKLW 124
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGC- 226
I+++ +DDEAF IW+ ++ +P + I RM DNFW G GPCGPCSEIY+D +RGC
Sbjct: 125 ITIHTEDDEAFAIWHNDIHIPADRIIRMA--DNFWEIGP-GPCGPCSEIYFDLGEERGCN 181
Query: 227 -SDVDLGDDT-RFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNY 284
SD +G D RF+E +NLVF QY++ + G+ PL +KNIDTG GLERIA +LQK +N+
Sbjct: 182 KSDCAVGCDCDRFLEIWNLVFTQYDRDEVGNYTPLAKKNIDTGAGLERIASVLQKKRSNF 241
Query: 285 ETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVV 344
ETDL+FP+I+ A+++ANV Y SN++T+++LK+I DH+R++ ++ DG+ PSN GRGYV+
Sbjct: 242 ETDLLFPLIEHAAKVANVEYG-SNNKTDVSLKVIADHIRSMTVMIGDGILPSNEGRGYVL 300
Query: 345 RRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKR 404
RR++RRAVR RLLGI E FL + + + D+ ++ I + ++
Sbjct: 301 RRILRRAVRHARLLGI--------EKIFLVPMVDIVNTIFAEAYPDLVEKQSYIKKVIQL 352
Query: 405 EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAE 464
EE RF TL +G +LL+ + + +E ++ L G AF LYDTFGFP E+T E+ E
Sbjct: 353 EEERFQTTLVQGMELLN----GHIQKLKEL-NISVLDGATAFKLYDTFGFPWELTLEILE 407
Query: 465 EHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPD-----TEFLGYDTLS 519
EH + +D FD M+ QR +++AA D D + IPD TE L D +
Sbjct: 408 EHDMQLDKPNFDSAMKEQRERARAARQ-------DHED-QQIIPDLSHLETEKLIVDEHA 459
Query: 520 AKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVV 579
+ NG V +V G DV +L+ T F+AE GGQ+GD GFL + G + TA
Sbjct: 460 ENGNIILAWKNGILVDEVHDGEDVAFILDVTSFHAEGGGQVGDTGFLEGSLGKMKITA-- 517
Query: 580 EVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVI 639
+K + H G + EG+ VG V+ VD R+ +HTATHLL AALK+V+
Sbjct: 518 ----TRKLVNGTTYHVGNVTEGLFRVGDLVKLKVDENRRREIARNHTATHLLHAALKQVL 573
Query: 640 GQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGD---ANLLQTKVMALDD 696
G +Q+GSLV+ +RLRFDF+ + +L EIE+L+N I + +++TK D
Sbjct: 574 GTHVNQSGSLVSPERLRFDFSHFSQVTSEQLLEIEKLVNHAILENISVTIVETK---QDK 630
Query: 697 AKRAGAIAMFGEKYGE 712
AK GA+A+FGEKYGE
Sbjct: 631 AKEMGAVALFGEKYGE 646
>gi|160876373|ref|YP_001555689.1| alanyl-tRNA synthetase [Shewanella baltica OS195]
gi|378709574|ref|YP_005274468.1| alanyl-tRNA synthetase [Shewanella baltica OS678]
gi|205830203|sp|A9KYF8.1|SYA_SHEB9 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|160861895|gb|ABX50429.1| alanyl-tRNA synthetase [Shewanella baltica OS195]
gi|315268563|gb|ADT95416.1| alanyl-tRNA synthetase [Shewanella baltica OS678]
Length = 874
Score = 567 bits (1461), Expect = e-159, Method: Compositional matrix adjust.
Identities = 320/683 (46%), Positives = 430/683 (62%), Gaps = 56/683 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
+R FL+F+ S GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 8 LRSAFLEFFRSNGHQVVDSSSLVPGNDPTLLFTNAGMNQFKDVFLGMDKRNYTRATTAQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
C+R ND++NVG T+RHHTFFEMLGNFSFGDYFK+EAI++ W F T LP RL
Sbjct: 68 CVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKEEAIRFGWTFLTETLKLPKERLC 127
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYYDF 220
+++Y+ DDEAFEIWNK++GV E+I R+G A DNFW G TGPCGPCSEI+YD
Sbjct: 128 VTIYQTDDEAFEIWNKKIGVAAENIIRIGDNKGAAYASDNFWQMGDTGPCGPCSEIFYD- 186
Query: 221 HPD-----RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
H D R S + GD RFIE +N+VFMQYN++ G + PL + ++DTG+G+ERIA
Sbjct: 187 HGDHIWGGRPGSPEEDGD--RFIEIWNIVFMQYNRQASGEMLPLPKPSVDTGMGIERIAA 244
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
I+Q V +NYE D+ +I KA+E+ VS D T +L++I DH+R+ +L++DGV P
Sbjct: 245 IMQGVHSNYEIDIFRTLIAKAAEIIGVS-----DLTEKSLRVIADHIRSCAFLIADGVMP 299
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN GRGYV+RR+IRRAVR G LG L + + + + A L A
Sbjct: 300 SNEGRGYVLRRIIRRAVRHGNKLGATEAFFYKLVPSLIAVMGDAAKGL---------AET 350
Query: 396 QRILEE-LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGF 454
Q I+E+ LK EE +F +TLERG +LD L + T L G+ F LYDT+GF
Sbjct: 351 QAIVEKALKAEEEQFARTLERGLGILDAALNELKGDT--------LDGETVFKLYDTYGF 402
Query: 455 PVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKI-PDTEFL 513
P+++T +V E + VD GF++ M QR ++QAA N D +A L KI +T F
Sbjct: 403 PMDLTADVCRERNIIVDEAGFEVAMAEQRSRAQAAGN---FGADYNAAL--KIDAETAFS 457
Query: 514 GYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTN 573
GY L+ +A V ++ NG+ V + G + V+L+ TPFYAESGGQ+GD G L V G
Sbjct: 458 GYTELAGQAKVTAIYQNGESVTAIKAGDEAVVVLDVTPFYAESGGQVGDKGQL-VANGVE 516
Query: 574 QQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQA 633
V D +K G H+G + G L VG+ VEA VD KLR R +++H+ THLL A
Sbjct: 517 -----FTVNDTQK-YGQATGHQGVLATGNLSVGQVVEAKVDKKLRHRTQLNHSVTHLLHA 570
Query: 634 ALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMA 693
AL++V+G SQ GSLV +RLRFDF+ + TEL+E+E L+N I + L+T M
Sbjct: 571 ALRQVLGTHVSQKGSLVDPERLRFDFSHFEGVKATELKEVEELVNTQIRRNHELKTAEMG 630
Query: 694 LDDAKRAGAIAMFGEKYGEQVKI 716
+D+AK GA+A+FGEKY QV++
Sbjct: 631 IDEAKEKGAMALFGEKYDSQVRV 653
>gi|388602721|ref|ZP_10161117.1| alanyl-tRNA ligase [Vibrio campbellii DS40M4]
Length = 860
Score = 567 bits (1461), Expect = e-159, Method: Compositional matrix adjust.
Identities = 314/687 (45%), Positives = 437/687 (63%), Gaps = 51/687 (7%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S D +R FL F+ S+GH+++ S+SLVP DPT+L T AGM QFK FLG R RA
Sbjct: 4 STDEVRNAFLKFFESKGHQIVESSSLVPHNDPTLLFTNAGMNQFKDCFLGLEKRAYTRAT 63
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
T+QRC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI +AWEF T LPA
Sbjct: 64 TAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIAFAWEFLTETLKLPA 123
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG--------ADDNFWNSGATGPCGPCSE 215
+RL ++VYE DDEAF+IWN++VGVP + I R+G DNFW G TGPCGPC+E
Sbjct: 124 DRLLVTVYETDDEAFDIWNQKVGVPADRIIRIGDKKGGKPFESDNFWQMGDTGPCGPCTE 183
Query: 216 IYYDF--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERI 273
I+YD H G D RFIE +N VFMQ+N++ DG++EPL + ++DTG+G+ERI
Sbjct: 184 IFYDHGEHIWGGRPGTPEEDGDRFIEIWNNVFMQFNRQADGTMEPLPKPSVDTGMGIERI 243
Query: 274 ARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGV 333
+ I+Q V +NYE D+ +IK A+E+ + Y D +N +L++I DH+R+ +L+ DGV
Sbjct: 244 SAIMQGVHSNYEIDVFQALIKAAAEV--IGY---EDLSNQSLRVIADHIRSCSFLIVDGV 298
Query: 334 FPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKA 393
PSN GRGYV+RR+IRRAVR G LG +GAF + E+ ++K
Sbjct: 299 MPSNEGRGYVLRRIIRRAVRHGNKLGA--------QGAFFHKLVGVLAEIMGTAGEELK- 349
Query: 394 REQRILEELKR-EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTF 452
R+Q ++E++ R EE F +TLERG +L++ L D+L G V L G+ F LYDT+
Sbjct: 350 RQQAVVEKVLRIEEENFGRTLERGMAILNEAL-DSL-----DGKV--LDGETVFKLYDTY 401
Query: 453 GFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKI-PDTE 511
GFP ++T +VA E ++D +GF+ ME QR++++ A N D +A A K+ TE
Sbjct: 402 GFPADLTNDVAREREFAIDEEGFEKAMEEQRQRAREAGN---FGTDYNA--AIKVDTQTE 456
Query: 512 FLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQG 571
F GY + V ++ V G V +S G ++L TPFYAESGGQ GD G + G
Sbjct: 457 FCGYTGTKGSSSVAAMFVEGDEVESLSAGDKAIIVLGETPFYAESGGQCGDAGEIRTESG 516
Query: 572 TNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLL 631
V V+D +K LG+ H G + EGVL G EV IVD + R ++H+ATHLL
Sbjct: 517 ------VFRVEDTQK-LGNAIAHHGVMAEGVLAKGDEVATIVDAERRAAISLNHSATHLL 569
Query: 632 QAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKV 691
AAL++++G+ +Q GSLV D LRFDF+ + EL+E+ERL+N I ++++T V
Sbjct: 570 HAALRQLLGEHVTQKGSLVKADGLRFDFSHLEAVTAAELKEVERLVNAQIRRNHVIETNV 629
Query: 692 MALDDAKRAGAIAMFGEKYGEQVKISS 718
M ++ AK+ GA+A+FGEKY ++V++ S
Sbjct: 630 MDIESAKKKGAMALFGEKYDDEVRVLS 656
>gi|421066700|ref|ZP_15528267.1| alanyl-tRNA synthetase, partial [Pelosinus fermentans A12]
gi|392453626|gb|EIW30496.1| alanyl-tRNA synthetase, partial [Pelosinus fermentans A12]
Length = 841
Score = 567 bits (1461), Expect = e-159, Method: Compositional matrix adjust.
Identities = 310/673 (46%), Positives = 430/673 (63%), Gaps = 40/673 (5%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
SG+ +RK+FLDF+ S+ H +L S L+PE DPT+LL AGM FKP F GK+ PR +
Sbjct: 5 SGNELRKKFLDFFKSKDHLILQSYPLIPENDPTLLLVGAGMAPFKPFFTGKMNPPHPRIS 64
Query: 108 TSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
TSQ+C+RT D+ENVGRT+RHHTFFEMLGNFSFGDYFKKEAI WAWEF T +P ++LW
Sbjct: 65 TSQKCVRTGDIENVGRTARHHTFFEMLGNFSFGDYFKKEAIAWAWEFITEHLEMPKDKLW 124
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGC- 226
I+++ +DDEAF IW+ ++ +P + I RM DNFW G GPCGPCSEIY+D +RGC
Sbjct: 125 ITIHTEDDEAFAIWHNDIHIPADRIIRMA--DNFWEIGP-GPCGPCSEIYFDLGEERGCN 181
Query: 227 -SDVDLGDDT-RFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNY 284
SD +G D RF+E +NLVF QY++ + G+ PL +KNIDTG GLERIA +LQ +N+
Sbjct: 182 KSDCAVGCDCDRFLEIWNLVFTQYDRDEAGNYTPLAKKNIDTGAGLERIASVLQNKRSNF 241
Query: 285 ETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVV 344
ETDL+FP+I+ A+++ANV Y SN +T+++LK+I DH+R++ ++ DG+ PSN GRGYV+
Sbjct: 242 ETDLLFPLIEHAAKVANVEYG-SNSKTDISLKVIADHIRSMTVMIGDGILPSNEGRGYVL 300
Query: 345 RRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKR 404
RR++RRAVR RLLGI E FL + + + D+ ++ I + ++
Sbjct: 301 RRILRRAVRHARLLGI--------EKIFLVPMVDIVNTIFAEAYPDLVEKQSYIKKVIQL 352
Query: 405 EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAE 464
EE RF TL +G +LL+ + + +E ++ L G AF LYDTFGFP E+T E+ E
Sbjct: 353 EEERFQTTLVQGMELLN----GHIQKLKEL-NISELDGATAFKLYDTFGFPWELTLEILE 407
Query: 465 EHGVSVDMKGFDIEMENQRRQSQAAH--NAVKLSVDDSADLAEKIPDTEFLGYDTLSAKA 522
EH + +D FD M+ QR +++AA + +L + D + L +TE L D +
Sbjct: 408 EHDMQLDKPNFDSAMKEQRERARAARQDHEDQLIIPDLSHL-----ETEKLIVDEHAENG 462
Query: 523 IVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVK 582
+ NG +V G DV +L+ T F+AE GGQIGD GFL + G + TA
Sbjct: 463 NIILAWKNGILADEVHDGEDVAFILDVTSFHAEGGGQIGDTGFLESSLGKMKITA----- 517
Query: 583 DVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQE 642
KK + H G + EG+ VG V+ VD R+ +HTATHLL AALK+V+G
Sbjct: 518 -TKKLVNGTTYHVGNVTEGLFRVGDLVKLKVDDNRRRDIARNHTATHLLHAALKQVLGTH 576
Query: 643 TSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGD---ANLLQTKVMALDDAKR 699
+Q+GSLV+ +RLRFDF+ + +L EIE+L+N I + +++TK D AK
Sbjct: 577 VNQSGSLVSSERLRFDFSHFSQVTSEQLLEIEKLVNHAILENISVTIVETK---QDKAKE 633
Query: 700 AGAIAMFGEKYGE 712
GA+A+FGEKYGE
Sbjct: 634 MGAVALFGEKYGE 646
>gi|343502334|ref|ZP_08740191.1| alanyl-tRNA synthetase [Vibrio tubiashii ATCC 19109]
gi|418480063|ref|ZP_13049129.1| alanyl-tRNA synthetase [Vibrio tubiashii NCIMB 1337 = ATCC 19106]
gi|342815071|gb|EGU50000.1| alanyl-tRNA synthetase [Vibrio tubiashii ATCC 19109]
gi|384572256|gb|EIF02776.1| alanyl-tRNA synthetase [Vibrio tubiashii NCIMB 1337 = ATCC 19106]
Length = 860
Score = 567 bits (1461), Expect = e-159, Method: Compositional matrix adjust.
Identities = 309/686 (45%), Positives = 428/686 (62%), Gaps = 49/686 (7%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S D +R FL F+ S+GH+++ S+SLVP DPT+L T AGM QFK FLG R RA
Sbjct: 4 STDEVRNAFLKFFESKGHQIVDSSSLVPHNDPTLLFTNAGMNQFKDCFLGAEKRAYTRAT 63
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
T+QRC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI +AWEF T GLP
Sbjct: 64 TAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIAFAWEFLTKTLGLPE 123
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG--------ADDNFWNSGATGPCGPCSE 215
+L ++VYE DDEAFEIWNK+VGVP + I R+G DNFW G TGPCGPC+E
Sbjct: 124 EKLLVTVYETDDEAFEIWNKKVGVPADKIVRIGDKEGGKKFESDNFWTMGDTGPCGPCTE 183
Query: 216 IYYDF--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERI 273
I+YD H G D RFIE +N VFMQ+N+ DG++EPL + +DTG+G+ERI
Sbjct: 184 IFYDHGEHIWGGRPGTPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPAVDTGMGIERI 243
Query: 274 ARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGV 333
+ I+Q V +NYE D+ +IK +E+ +D +N +L++I DH+R+ +L++DGV
Sbjct: 244 SAIMQGVHSNYEIDVFQKLIKATAEVVG-----HDDLSNQSLRVIADHIRSCSFLIADGV 298
Query: 334 FPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKA 393
PSN GRGYV+RR+IRRAVR G LG +G L G + A EL
Sbjct: 299 MPSNEGRGYVLRRIIRRAVRHGNKLGAQGVFFHKLVGVLAEVMGSAAEELK--------- 349
Query: 394 REQRILEELKR-EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTF 452
++Q ++E++ R EE F +TLERG +L++ L D L L G+ F LYDT+
Sbjct: 350 KQQELVEKVLRIEEENFGRTLERGMVILNEAL-DVLEG-------KELDGETVFKLYDTY 401
Query: 453 GFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEF 512
GFP ++T +VA E ++D GF+ ME QR Q A A + D +A + + ++EF
Sbjct: 402 GFPADLTNDVARERDFTIDEAGFEKAMEEQR---QRAREAGQFGTDYNATIKTE-AESEF 457
Query: 513 LGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGT 572
GY K+ V + V+G+ V +S G ++L TPFYAESGGQ GD G L G
Sbjct: 458 CGYTGTEGKSNVAEIFVDGEVVEALSAGDKAIIILGETPFYAESGGQCGDAGVLKTESG- 516
Query: 573 NQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQ 632
+ +V+D +K LG+ H G + EGVL G EV+A VD + R ++H+ATHLL
Sbjct: 517 -----LFKVEDTQK-LGNAIAHHGVLAEGVLAKGDEVQATVDAERRASISLNHSATHLLH 570
Query: 633 AALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVM 692
AAL+ V+G+ +Q GSLV + LRFDF+ + EL+E+ERL+N + ++++T VM
Sbjct: 571 AALRSVLGEHVTQKGSLVKPENLRFDFSHLEAVTPAELKEVERLVNAQVRRNHVIETNVM 630
Query: 693 ALDDAKRAGAIAMFGEKYGEQVKISS 718
++ AK+ GA+A+FGEKY ++V++ S
Sbjct: 631 DIESAKQKGAMALFGEKYDDEVRVLS 656
>gi|91227829|ref|ZP_01262002.1| alanyl-tRNA synthetase [Vibrio alginolyticus 12G01]
gi|91188339|gb|EAS74635.1| alanyl-tRNA synthetase [Vibrio alginolyticus 12G01]
Length = 860
Score = 567 bits (1460), Expect = e-158, Method: Compositional matrix adjust.
Identities = 316/687 (45%), Positives = 431/687 (62%), Gaps = 51/687 (7%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S D +R FL F+ S+GH+++ S+SLVP DPT+L T AGM QFK FLG R RA
Sbjct: 4 STDEVRNAFLKFFESKGHQIVESSSLVPHNDPTLLFTNAGMNQFKDCFLGLEKRAYTRAT 63
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
T+QRC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI +AWEF T LPA
Sbjct: 64 TAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAISFAWEFLTEVLKLPA 123
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG--------ADDNFWNSGATGPCGPCSE 215
+RL ++VYE DDEAF+IWNK+VGVP + I R+G DNFW G TGPCGPC+E
Sbjct: 124 DRLLVTVYETDDEAFDIWNKKVGVPADRIVRIGDKEGGKPYESDNFWQMGDTGPCGPCTE 183
Query: 216 IYYDF--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERI 273
I+YD H G D RFIE +N VFMQ+N+ DG++EPL + ++DTG+G+ERI
Sbjct: 184 IFYDHGEHIWGGRPGTPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPSVDTGMGIERI 243
Query: 274 ARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGV 333
+ I+Q V +NYE D+ +IK A+E+ + Y D +N +L++I DH+R+ +L+ DGV
Sbjct: 244 SAIMQGVHSNYEIDVFQALIKAAAEV--IGY---EDLSNQSLRVIADHIRSCSFLIVDGV 298
Query: 334 FPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKA 393
PSN GRGYV+RR+IRRAVR G LG +G L G + EL
Sbjct: 299 MPSNEGRGYVLRRIIRRAVRHGNKLGAQGAFFHKLVGVLADIMGTAGEELK--------- 349
Query: 394 REQRILEELKR-EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTF 452
R+Q ++E++ R EE F +TLERG +L++ L D L G V L G+ F LYDT+
Sbjct: 350 RQQAVVEKVLRIEEENFGRTLERGMAILNEAL-DNL-----DGKV--LDGETVFKLYDTY 401
Query: 453 GFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKI-PDTE 511
GFP ++T +VA E ++D +GF+ ME QR++++ A N D +A A K+ TE
Sbjct: 402 GFPADLTNDVAREREFAIDEEGFEKAMEEQRQRAREAGN---FGTDYNA--AIKVDTQTE 456
Query: 512 FLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQG 571
F GY + V ++ V G V +S G ++L TPFYAESGGQ GD G + G
Sbjct: 457 FCGYTGTKGSSSVAAMFVEGNEVDSLSAGDKAIIVLGETPFYAESGGQCGDAGEIRTESG 516
Query: 572 TNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLL 631
V V+D +K LG+ H G + EGVL G EV IVD + R ++H+ATHLL
Sbjct: 517 ------VFRVEDTQK-LGNAIAHHGVMAEGVLAKGDEVATIVDAERRAAISLNHSATHLL 569
Query: 632 QAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKV 691
AAL++V+G+ +Q GSLV D LRFDF+ + EL+E+ERL+N I + ++T V
Sbjct: 570 HAALRQVLGEHVTQKGSLVKADNLRFDFSHLEAVTAAELKEVERLVNAQIRRNHTIETNV 629
Query: 692 MALDDAKRAGAIAMFGEKYGEQVKISS 718
M ++ AK+ GA+A+FGEKY ++V++ S
Sbjct: 630 MDIESAKKKGAMALFGEKYDDEVRVLS 656
>gi|406981920|gb|EKE03305.1| hypothetical protein ACD_20C00222G0004 [uncultured bacterium]
Length = 884
Score = 567 bits (1460), Expect = e-158, Method: Compositional matrix adjust.
Identities = 302/680 (44%), Positives = 448/680 (65%), Gaps = 33/680 (4%)
Query: 49 SGDSIRKRFLDFYASR-GHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLG-KVPRQVPRA 106
+G IRK+F++F+ + HK + S+SL+P++PTVLLT AGMLQF PIFLG + P + PRA
Sbjct: 6 TGKDIRKKFINFFIEKHNHKQVKSSSLIPDNPTVLLTPAGMLQFVPIFLGYEKPPEPPRA 65
Query: 107 ATSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLP 162
T Q+C R +D+ENVGRT RHHTFFEMLGNFSFGDYFK+E I WAWEF T E L
Sbjct: 66 VTVQKCARAGGKDSDIENVGRTPRHHTFFEMLGNFSFGDYFKEEIIPWAWEFVTEELKLD 125
Query: 163 ANRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFW-NSGATGPCGPCSEIYYDFH 221
+RLWI+++E DDEAFEIWNK+VG+P E I R G DNFW G TGPCGPC+E++YD
Sbjct: 126 KSRLWITIFETDDEAFEIWNKKVGIPAERIIRKGKKDNFWGPPGPTGPCGPCTELHYDLG 185
Query: 222 PDRGC---SDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQ 278
C ++ + R++E +NLVFM+ NK ++G+ PL++KN+DTG+GLER+ +
Sbjct: 186 EQYSCGTDCSIETCECDRYVEIWNLVFMELNKDEEGNFTPLERKNVDTGMGLERVTMAVN 245
Query: 279 KVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNI 338
+ + +ETDL+ PI+++ +++ Y + N RT+++L+II DH R + +L++DG+ P N
Sbjct: 246 NLCSTFETDLLSPILEQICQMSGKKYKE-NKRTDVSLRIITDHARCVCFLIADGLVPGNE 304
Query: 339 GRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRI 398
GR YV+R ++RRA+R G++LG LE FL + + ++ +++ +++I
Sbjct: 305 GRNYVLRMILRRALRHGKILG--------LELPFLYKLVDTVVDNYKETYPELEQNKEKI 356
Query: 399 LEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEI 458
+ +K EE RF QT+ RGE LLD+++ ++ S ++SG+DAF LYDT+GFP+E+
Sbjct: 357 INVIKAEEERFKQTIGRGESLLDEIIGKV-----KNTSEKQISGEDAFKLYDTYGFPLEL 411
Query: 459 TKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVD-DSADLAEKIPDTEFLGYD- 516
T E+AEE G+SVD + F+IEM+ QR +++ A V+L+ D + + + FLGY
Sbjct: 412 TIEIAEEQGISVDKEAFNIEMQEQRERAKKAQATVRLTDDLIYVETLNNVGPSVFLGYCI 471
Query: 517 TLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQT 576
T S + V++++ N + ++G ++EV+LN+TPFYAESGGQIGD G + G N +
Sbjct: 472 TKSDDSTVKAIIKNNERFDSANQGDEIEVVLNKTPFYAESGGQIGDAGHI---AGENFK- 527
Query: 577 AVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALK 636
+EV + K +F+H+ + G +++ +A+VD ++ +HHT+ HLLQAAL+
Sbjct: 528 --LEVTNTIK-FDELFIHRAKVLTGTVKLDDMAQAVVDDTRKKDIMIHHTSAHLLQAALR 584
Query: 637 KVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDD 696
KV+G+ QAGS V DR RFDF+F R L EL +E LIN WI +T D
Sbjct: 585 KVLGETVVQAGSQVTPDRTRFDFSFDRALTQDELNAVEDLINQWINQNLHKETVETTPDQ 644
Query: 697 AKRAGAIAMFGEKYGEQVKI 716
A+ GAIA+F EKYG++V++
Sbjct: 645 ARELGAIALFNEKYGDKVRV 664
>gi|34763053|ref|ZP_00144027.1| Alanyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii
ATCC 49256]
gi|27887279|gb|EAA24376.1| Alanyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii
ATCC 49256]
Length = 867
Score = 567 bits (1460), Expect = e-158, Method: Compositional matrix adjust.
Identities = 293/674 (43%), Positives = 436/674 (64%), Gaps = 35/674 (5%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
+G+ IR++F++F+ + HK SASL+P+DPT+LLT+AGM+ FKP FLG+ PR T
Sbjct: 3 TGNEIREKFIEFFMQKQHKHFESASLIPDDPTLLLTVAGMVPFKPYFLGQKEAPCPRVTT 62
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
Q+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFKKEAI+W+WEF T + ++LW+
Sbjct: 63 YQKCIRTNDLENVGRTARHHTFFEMLGNFSFGDYFKKEAIKWSWEFVTEVLKINKDKLWV 122
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYD----FHPDR 224
+V+ DDEA +IW +E P E I RMG +N+W++G TG CGPCSEI+ D + D
Sbjct: 123 TVFTTDDEAEKIWIEECNFPKERIVRMGESENWWSAGPTGSCGPCSEIHVDLGVQYGGDE 182
Query: 225 GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNY 284
D G D RFIE +NLVF ++N+ +DGSLEPL +KNIDTG GLERIA ++Q NN+
Sbjct: 183 NSKIGDEGTDNRFIEIWNLVFTEWNRMEDGSLEPLPKKNIDTGAGLERIAAVVQGKTNNF 242
Query: 285 ETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVV 344
ETDL+FPI+++A+++ Y + N T+ +LK+I DH RA+ +L++DGV PSN GRGY++
Sbjct: 243 ETDLLFPILEEAAKITGSQYGK-NSETDFSLKVITDHARAVTFLINDGVIPSNEGRGYIL 301
Query: 345 RRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKR 404
RR++RRAVR GRLLG K F+ + +K +E D+K + I + +K
Sbjct: 302 RRILRRAVRHGRLLGYK--------DLFMYKMVDKVVEKFEVAYPDLKKNLENIRKIVKI 353
Query: 405 EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAE 464
EE +F TL++G +L++Q + + L+ + +L G+ +F LYDT+GFP E+T+E+AE
Sbjct: 354 EEEKFSNTLDQGIQLVNQEIDNLLANGKN-----KLDGEISFKLYDTYGFPYELTEEIAE 408
Query: 465 EHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDS--ADLAEKIPDTEFLGYDTLSAKA 522
E G++V + F+ +ME Q+ ++++A V DS + +K T+F GY+ K
Sbjct: 409 ERGITVLREEFEAKMEEQKEKARSAREVVMEKGQDSFIEEFYDKYGVTKFTGYE----KT 464
Query: 523 IVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVK 582
E L+N ++ +K ++ ++TPFYAESGGQ+GD G +Y V +V
Sbjct: 465 EDEGKLLN----LRETKDGKYLLIFDKTPFYAESGGQVGDQGKIY------SDNFVGKVL 514
Query: 583 DVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQE 642
DV+K +F+H +G+ E + + +VD R +HTATHLL AL++V+G
Sbjct: 515 DVQKQ-KDIFIHTVEFEKGISEENKTYKLVVDVVRRLDTAKNHTATHLLHKALREVVGTH 573
Query: 643 TSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGA 702
QAGSLV ++LRFDF+ + L +L +IE ++N I + + +++AK+ GA
Sbjct: 574 VQQAGSLVDPEKLRFDFSHYEALTAEQLSKIEDIVNEKIREGIEVSISYHNIEEAKKLGA 633
Query: 703 IAMFGEKYGEQVKI 716
+ +FG+KYG+ V++
Sbjct: 634 MMLFGDKYGDMVRV 647
>gi|436608292|ref|ZP_20513605.1| alanyl-tRNA synthetase, partial [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22704]
gi|434970472|gb|ELL63058.1| alanyl-tRNA synthetase, partial [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22704]
Length = 863
Score = 567 bits (1460), Expect = e-158, Method: Compositional matrix adjust.
Identities = 311/683 (45%), Positives = 433/683 (63%), Gaps = 62/683 (9%)
Query: 59 DFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQRCIRT-- 115
DF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQRC+R
Sbjct: 1 DFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQRCVRAGG 60
Query: 116 --NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANRLWISVY 171
ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP RLW++VY
Sbjct: 61 KHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWFALPKERLWVTVY 120
Query: 172 EDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYYDFHPDR 224
E DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+YD H D
Sbjct: 121 ETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFYD-HGDH 179
Query: 225 ---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVP 281
G D R+IE +N+VFMQ+N++ +G++EPL + ++DTG+GLERIA +LQ V
Sbjct: 180 IWGGPPGSPEEDGDRYIEIWNIVFMQFNRQAEGTMEPLPKPSVDTGMGLERIAAVLQHVN 239
Query: 282 NNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRG 341
+NY+ DL +I+ +++ + D N +L++I DH+R+ +L++DGV PSN RG
Sbjct: 240 SNYDIDLFRTLIEAVAKVTGAT-----DLGNKSLRVIADHIRSCAFLVADGVLPSNENRG 294
Query: 342 YVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEE 401
YV+RR+IRRAVR G +LG K F + IE+ ++K ++ ++ +
Sbjct: 295 YVLRRIIRRAVRHGNMLGAKE--------TFFYKLVGPLIEVMGSAGEELKRQQAQVEQV 346
Query: 402 LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKE 461
LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFPV++T +
Sbjct: 347 LKTEEEQFARTLERGLALLDEELAKLQGDT--------LDGETAFRLYDTYGFPVDLTAD 398
Query: 462 VAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAEKIPDTEFLGY 515
V E + VD GF+ ME QRR+++ A +NA+ + VD + +EF GY
Sbjct: 399 VCRERNIKVDEAGFEAAMEEQRRRAREASGFGADYNAM-IRVDSA---------SEFKGY 448
Query: 516 DTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
D L V +L V+GK V ++ G + V+L++TPFYAESGGQ+GD G L +G
Sbjct: 449 DHLELNGKVTALFVDGKAVEAINAGQEAVVVLDQTPFYAESGGQVGDKGEL---KGAGFT 505
Query: 576 TAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAAL 635
AV + + +++G H G + G L+VG V+A VD R R +++H+ATHL+ AAL
Sbjct: 506 FAVDDTQKYGQAIG----HLGKLSAGALKVGDAVQADVDEARRARIRLNHSATHLMHAAL 561
Query: 636 KKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALD 695
++V+G +Q GSLV+ LRFDF+ + + +E+ E+E L+N I ++T +M LD
Sbjct: 562 RQVLGTHVAQKGSLVSDKVLRFDFSHNEAMKPSEIREVEDLVNAQIRRNLPIETNIMDLD 621
Query: 696 DAKRAGAIAMFGEKYGEQVKISS 718
AK GA+A+FGEKY E+V++ S
Sbjct: 622 AAKAKGAMALFGEKYDERVRVLS 644
>gi|333369341|ref|ZP_08461466.1| alanine--tRNA ligase [Psychrobacter sp. 1501(2011)]
gi|332973029|gb|EGK10968.1| alanine--tRNA ligase [Psychrobacter sp. 1501(2011)]
Length = 905
Score = 567 bits (1460), Expect = e-158, Method: Compositional matrix adjust.
Identities = 320/716 (44%), Positives = 451/716 (62%), Gaps = 68/716 (9%)
Query: 24 SARSTSASVQPLTEEVEDKSQDFPSSGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVL 82
SA +++ SV P T + F S+ + +RK F+DF+ S+ H +PS+SLVP DPT+L
Sbjct: 4 SAPTSTNSVSPTTRK-------FLSTAE-LRKAFIDFFVSKQHTHVPSSSLVPYNDPTLL 55
Query: 83 LTIAGMLQFKPIFLGKVPRQVPRAATSQRCIRT----NDVENVGRTSRHHTFFEMLGNFS 138
T AGM QFK FLG R RA TSQ+C+R ND++NVG T+RHHTFFEMLGNFS
Sbjct: 56 FTNAGMNQFKDCFLGIDKRDYSRAVTSQKCVRAGGKHNDLDNVGYTARHHTFFEMLGNFS 115
Query: 139 FGDYFKKEAIQWAWEFSTVE--FGLPANRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG 196
FGDYFKK AI +AWEF T L A++L++++YE DDEAF+IW+K++G+P E I R+G
Sbjct: 116 FGDYFKKSAIAYAWEFLTSADWLALDADKLYVTIYETDDEAFDIWHKDIGLPAERIIRIG 175
Query: 197 -------ADDNFWNSGATGPCGPCSEIYYDF--HPDRGCSDVDLGDDTRFIEFYNLVFMQ 247
A DNFW G TGPCGPCSE++YD H + G D R+IE +N VFMQ
Sbjct: 176 DNKGAPYASDNFWAMGDTGPCGPCSEVFYDHGAHVEGGLPGTPEEDGDRYIEVWNCVFMQ 235
Query: 248 YNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDLIFPIIKKASELANVSYAQS 307
+N++ DG++EPL ++DTG+GLERI+ ILQ V +NYE DL +I A++L +
Sbjct: 236 FNRQPDGTMEPLPAPSVDTGMGLERISAILQGVHSNYEIDLFVNLINSAADLLGI----- 290
Query: 308 NDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGN 367
+ +LK+I DH+RA+ +L++DGV PSN GRGYV+RR+IRRAVR G LG
Sbjct: 291 KNEEQASLKVIADHIRAVSFLIADGVLPSNEGRGYVLRRIIRRAVRHGNKLGA------- 343
Query: 368 LEGAFL-----PSIAEKAIELSTHIDSDVKAREQRILEELKREELRFVQTLERGEKLLDQ 422
E +F P +AE +D ++ I +++EE++F +TL +G +LLD
Sbjct: 344 -EDSFFYKMVAPLVAEMGEAYPQLVD-----KQAFIEAAIEKEEVQFAKTLAQGLRLLDS 397
Query: 423 MLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGVSVDMKGFDIEMENQ 482
L+ + +SG V LSG+ AF LYDT+GFPV++T ++ E G+S+D GFD +M Q
Sbjct: 398 ELS-----SLKSGDV--LSGEAAFKLYDTYGFPVDLTADITRERGISIDEAGFDEQMNIQ 450
Query: 483 RRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTLS-AKAIVESLLVNGKPVIKVSKGS 541
R Q A +A K VD SA + P TEF+GY+ L +A + L GK V ++++G
Sbjct: 451 R---QRARDAGKFDVDYSAAIKVDAP-TEFVGYEKLDDTQANIIGLYQQGKEVDELNEGD 506
Query: 542 DVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVKKSLGSVFVHKGTIREG 601
+ ++L+RTPFYAE GGQ+G+ G + + G V V+D KKS G +H G + G
Sbjct: 507 EGVIVLDRTPFYAEGGGQVGEMGEIRTSSG------VFNVEDTKKS-GQAIIHHGVVNMG 559
Query: 602 VLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQAGSLVAFDRLRFDFNF 661
L+ + +A V +R + +H+ATHLL AAL+KV+G E SQ GSLV+ + LRFDF++
Sbjct: 560 SLKTKQTADAQVVSAIRSASARNHSATHLLHAALRKVLGNEVSQKGSLVSSEVLRFDFSY 619
Query: 662 HRPLLDTELEEIERLINGWIGDANL-LQTKVMALDDAKRAGAIAMFGEKYGEQVKI 716
+ + +L IERL+N I AN+ Q ++M +D+A GA A+FGEKYGE V++
Sbjct: 620 DQAVSQKDLATIERLVNEQI-QANIETQIELMKIDEAMAKGAAALFGEKYGETVRV 674
>gi|294785718|ref|ZP_06751006.1| alanine--tRNA ligase [Fusobacterium sp. 3_1_27]
gi|294487432|gb|EFG34794.1| alanine--tRNA ligase [Fusobacterium sp. 3_1_27]
Length = 867
Score = 567 bits (1460), Expect = e-158, Method: Compositional matrix adjust.
Identities = 293/674 (43%), Positives = 436/674 (64%), Gaps = 35/674 (5%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
+G+ IR++F++F+ + HK SASL+P+DPT+LLT+AGM+ FKP FLG+ PR T
Sbjct: 3 TGNEIREKFIEFFMQKQHKHFESASLIPDDPTLLLTVAGMVPFKPYFLGQKEAPCPRVTT 62
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
Q+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFKKEAI+W+WEF T + ++LW+
Sbjct: 63 YQKCIRTNDLENVGRTARHHTFFEMLGNFSFGDYFKKEAIKWSWEFVTEVLKINKDKLWV 122
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYD----FHPDR 224
+V+ DDEA +IW +E P E I RMG +N+W++G TG CGPCSEI+ D + D
Sbjct: 123 TVFTTDDEAEKIWIEECNFPKERIVRMGESENWWSAGPTGSCGPCSEIHVDLGVQYGGDE 182
Query: 225 GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNY 284
D G D RFIE +NLVF ++N+ +DGSLEPL +KNIDTG GLERIA ++Q NN+
Sbjct: 183 NSKIGDEGTDNRFIEIWNLVFTEWNRMEDGSLEPLPKKNIDTGAGLERIAAVVQGKTNNF 242
Query: 285 ETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVV 344
ETDL+FPI+++A+++ Y + N T+ +LK+I DH RA+ +L++DGV PSN GRGY++
Sbjct: 243 ETDLLFPILEEAAKITGSQYGK-NSETDFSLKVITDHARAVTFLINDGVIPSNEGRGYIL 301
Query: 345 RRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKR 404
RR++RRAVR GRLLG K F+ + +K +E D+K I + +K
Sbjct: 302 RRILRRAVRHGRLLGYK--------DLFMYKMVDKVVEKFEVAYPDLKKNLGNIRKIVKI 353
Query: 405 EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAE 464
EE +F TL++G +L++Q + + L+ + +L G+ +F LYDT+GFP E+T+E+AE
Sbjct: 354 EEEKFSNTLDQGIQLVNQEIDNLLANGKN-----KLDGEISFKLYDTYGFPYELTEEIAE 408
Query: 465 EHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDS--ADLAEKIPDTEFLGYDTLSAKA 522
E G++V + F+ +ME Q+ ++++A V DS + +K T+F GY+ K
Sbjct: 409 ERGITVLREEFEAKMEEQKEKARSAREVVMEKGQDSFIEEFYDKYGVTKFTGYE----KT 464
Query: 523 IVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVK 582
E L+N ++ +K ++ ++TPFYAESGGQ+GD G +Y V +V
Sbjct: 465 EDEGKLLN----LRETKDGKYLLIFDKTPFYAESGGQVGDQGKIY------SDNFVGKVL 514
Query: 583 DVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQE 642
DV+K +F+H +G+ E + + +VD R +HTATHLL AL++V+G
Sbjct: 515 DVQKQ-KDIFIHTVEFEKGIAEENKTYKLVVDVVRRLDTAKNHTATHLLHKALREVVGTH 573
Query: 643 TSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGA 702
QAGSLV ++LRFDF+ + L +L +IE ++N I + + +++AK+ GA
Sbjct: 574 VQQAGSLVDPEKLRFDFSHYEALTAEKLSKIENIVNEKIREGIEVSISYHNIEEAKKLGA 633
Query: 703 IAMFGEKYGEQVKI 716
+ +FG+KYG++V++
Sbjct: 634 MMLFGDKYGDKVRV 647
>gi|385787400|ref|YP_005818509.1| alanyl-tRNA synthetase [Erwinia sp. Ejp617]
gi|310766672|gb|ADP11622.1| Alanyl-tRNA synthetase [Erwinia sp. Ejp617]
Length = 876
Score = 567 bits (1460), Expect = e-158, Method: Compositional matrix adjust.
Identities = 306/683 (44%), Positives = 425/683 (62%), Gaps = 50/683 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG+ R RA +SQR
Sbjct: 8 IRQAFLDFFQSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGQDKRNYSRATSSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEF--STVEFGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK+EAI +AWE S+ FGLP +
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKREAIAFAWELLTSSQWFGLPKEK 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA +IW KE+GVP E I R+G A DNFW G TGPCGPCSEI++
Sbjct: 128 LWVTVYETDDEALDIWEKEIGVPRERIIRIGDNKGSAYASDNFWQMGDTGPCGPCSEIFF 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++ PL + ++DTG+GLERI
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQPDGTMLPLPKPSVDTGMGLERITA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NYE DL +IK ++L + D +N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYEIDLFAQLIKSVAQLTGAT-----DLSNKSLRVIADHIRSCAFLIADGVIP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG EG F + I + D+K+++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGA--------EGTFFYKLVAPLIAVMGAAGDDLKSQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ L + S T L G+ F LYDTFGFP
Sbjct: 354 AQVEQVLKTEEEQFAKTLERGLALLDEELENLQSDT--------LDGETVFRLYDTFGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGY 515
++T +V E + +D GF+ ME QR Q A +A D + ++ +EF GY
Sbjct: 406 ADLTADVCRERNLKIDEAGFERAMEQQR---QRARDASGFGCDYN-NVIHIDQASEFKGY 461
Query: 516 DTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
L A + ++ V+G+ +S G + ++L+ TPFYAESGGQ+GD G L QG +
Sbjct: 462 QQLQLNAAITAIFVDGQAADTISAGREGVIVLDATPFYAESGGQVGDTGEL---QGNSAS 518
Query: 576 TAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAAL 635
V + +++G H G + G L VG V A VD R R +++H+ATHLL AAL
Sbjct: 519 FIVSNTQKYAQAIG----HSGKLATGELRVGDRVAAQVDEARRARIRLNHSATHLLHAAL 574
Query: 636 KKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALD 695
++V+GQ SQ GSLV LRFDF+ + E+ ++E ++N I ++T +M L+
Sbjct: 575 RQVLGQHVSQKGSLVNDKYLRFDFSHFEAMTQQEIRQVEEIVNAQIRRNLPIETNIMELE 634
Query: 696 DAKRAGAIAMFGEKYGEQVKISS 718
AK GA+A+FGEKY + V++ S
Sbjct: 635 AAKAHGAMALFGEKYDDHVRVLS 657
>gi|237741671|ref|ZP_04572152.1| alanyl-tRNA synthetase [Fusobacterium sp. 4_1_13]
gi|229429319|gb|EEO39531.1| alanyl-tRNA synthetase [Fusobacterium sp. 4_1_13]
Length = 867
Score = 567 bits (1460), Expect = e-158, Method: Compositional matrix adjust.
Identities = 293/674 (43%), Positives = 436/674 (64%), Gaps = 35/674 (5%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
+G+ IR++F++F+ + HK SASL+P+DPT+LLT+AGM+ FKP FLG+ PR T
Sbjct: 3 TGNEIREKFIEFFMQKQHKHFESASLIPDDPTLLLTVAGMVPFKPYFLGQKEAPCPRVTT 62
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
Q+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFKKEAI+W+WEF T + ++LW+
Sbjct: 63 YQKCIRTNDLENVGRTARHHTFFEMLGNFSFGDYFKKEAIKWSWEFVTEVLKINKDKLWV 122
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYD----FHPDR 224
+V+ DDEA +IW +E P E I RMG +N+W++G TG CGPCSEI+ D + D
Sbjct: 123 TVFTTDDEAEKIWIEECNFPKERIVRMGESENWWSAGPTGSCGPCSEIHVDLGVQYGGDE 182
Query: 225 GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNY 284
D G D RFIE +NLVF ++N+ +DGSLEPL +KNIDTG GLERIA ++Q NN+
Sbjct: 183 NSKIGDEGTDNRFIEIWNLVFTEWNRMEDGSLEPLPKKNIDTGAGLERIAAVVQGKTNNF 242
Query: 285 ETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVV 344
ETDL+FPI+++A+++ Y + N T+ +LK+I DH RA+ +L++DGV PSN GRGY++
Sbjct: 243 ETDLLFPILEEAAKITGSQYGK-NSETDFSLKVITDHARAVTFLINDGVIPSNEGRGYIL 301
Query: 345 RRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKR 404
RR++RRAVR GRLLG K F+ + +K +E D+K I + +K
Sbjct: 302 RRILRRAVRHGRLLGYK--------DLFMYKMVDKVVEKFEVAYPDLKKNLGNIRKIVKI 353
Query: 405 EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAE 464
EE +F TL++G +L++Q + + L+ + +L G+ +F LYDT+GFP E+T+E+AE
Sbjct: 354 EEEKFSNTLDQGIQLVNQEIDNLLANGKN-----KLDGEISFKLYDTYGFPYELTEEIAE 408
Query: 465 EHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDS--ADLAEKIPDTEFLGYDTLSAKA 522
E G++V + F+ +ME Q+ ++++A V DS + +K T+F GY+ K
Sbjct: 409 ERGITVLREEFEAKMEEQKEKARSAREVVMEKGQDSFIEEFYDKYGVTKFTGYE----KT 464
Query: 523 IVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVK 582
E L+N ++ +K ++ ++TPFYAESGGQ+GD G +Y V +V
Sbjct: 465 EDEGKLLN----LRETKDGKYLLIFDKTPFYAESGGQVGDQGKIY------SDNFVGKVL 514
Query: 583 DVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQE 642
DV+K +F+H +G+ E + + +VD R +HTATHLL AL++V+G
Sbjct: 515 DVQKQ-KDIFIHTVEFEKGIAEENKTYKLVVDVVRRLDTAKNHTATHLLHKALREVVGTH 573
Query: 643 TSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGA 702
QAGSLV ++LRFDF+ + L +L +IE ++N I + + +++AK+ GA
Sbjct: 574 VQQAGSLVDPEKLRFDFSHYEALTAEKLSKIENIVNEKIREGIEVSISYHNIEEAKKLGA 633
Query: 703 IAMFGEKYGEQVKI 716
+ +FG+KYG++V++
Sbjct: 634 MMLFGDKYGDKVRV 647
>gi|317050904|ref|YP_004112020.1| alanyl-tRNA synthetase [Desulfurispirillum indicum S5]
gi|316945988|gb|ADU65464.1| alanyl-tRNA synthetase [Desulfurispirillum indicum S5]
Length = 893
Score = 567 bits (1460), Expect = e-158, Method: Compositional matrix adjust.
Identities = 303/677 (44%), Positives = 431/677 (63%), Gaps = 33/677 (4%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
+R++FL ++ S+GHKV+ S+ L+P +DPT+L T AGM QFK IFLG R RAAT+Q+
Sbjct: 16 VRQQFLSYFESKGHKVVASSGLIPFDDPTLLFTNAGMNQFKNIFLGNEKRDYNRAATAQK 75
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK+EAI++AWEF T L +RLW
Sbjct: 76 CVRAGGKHNDLENVGVTARHHTFFEMLGNFSFGDYFKREAIEYAWEFITEVMKLDRSRLW 135
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCS 227
+SV+ +DDEA IW +GVP E I R G DNFW G TGPCGPCSEI+YD PD C+
Sbjct: 136 VSVFREDDEALAIWRDHIGVPAERILRCGEKDNFWQMGETGPCGPCSEIHYDQGPDVPCT 195
Query: 228 D-----VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPN 282
+ V+ D R++E +NLVFMQY+++ DG+L PL + +IDTG+GLER+A ++Q +
Sbjct: 196 EGGPCGVECECD-RYLEIWNLVFMQYDRQPDGTLVPLPKPSIDTGMGLERLAAVVQGETS 254
Query: 283 NYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGY 342
NY TDL P++ + + ++Y +S ++++++I DHLRA +L+SDG PSN GRGY
Sbjct: 255 NYHTDLFLPLLNRIAADCGMTYTRSASHQDVSMRVIADHLRASTFLISDGAIPSNEGRGY 314
Query: 343 VVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEEL 402
V+RR++RRA+R LG K +L E E+ VK R + E +
Sbjct: 315 VLRRIMRRAMRHANQLGKKEPYMYSLVCLMEEHYGEAFPEI-------VKNRAM-VEEII 366
Query: 403 KREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEV 462
+EE RF TL+ G +L++M+A ++S V L GQ AF LYDT+GFP+++T ++
Sbjct: 367 YQEERRFANTLDHGLAILEEMVAG----LQKSAQVA-LDGQSAFKLYDTYGFPLDLTVDI 421
Query: 463 AEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD--LAEKIPDTEFLGYDTLSA 520
E+ G++VD GF ME Q+ +++A+ AV SV S D L E EF GYD LSA
Sbjct: 422 LEDRGITVDEAGFYAAMEEQKVRARASWKAVA-SVTSSEDLRLIESRHQQEFSGYDFLSA 480
Query: 521 KAIVESLL-VNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVV 579
KA V LL + + +V G + +LL++TPFYAESGGQ+ D G + G +
Sbjct: 481 KASVIGLLDLQENSLSQVRAGEEAWLLLDKTPFYAESGGQVADTGVVATDGGD-----IF 535
Query: 580 EVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVI 639
EV+ V+KS+G + +H+G + +G G V A V+ + R+ ++H+ATHLL AALK +
Sbjct: 536 EVRSVRKSIGGLHLHRGVVSQGRFSAGDAVTATVNSRRRRNITLNHSATHLLHAALKSTV 595
Query: 640 GQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKR 699
G+ QAGSLV +LRFDF + L EL+ +E +N + + ++ ++M LDDA
Sbjct: 596 GEHVRQAGSLVEDGKLRFDFTHWKGLTPEELQGVEDQVNAQVMANHAVRKELMTLDDAVA 655
Query: 700 AGAIAMFGEKYGEQVKI 716
GA A+F EKYG+ V++
Sbjct: 656 RGATALFDEKYGDDVRV 672
>gi|345877445|ref|ZP_08829192.1| alanyl-tRNA synthetase [endosymbiont of Riftia pachyptila (vent
Ph05)]
gi|344225536|gb|EGV51892.1| alanyl-tRNA synthetase [endosymbiont of Riftia pachyptila (vent
Ph05)]
Length = 884
Score = 567 bits (1460), Expect = e-158, Method: Compositional matrix adjust.
Identities = 315/687 (45%), Positives = 446/687 (64%), Gaps = 46/687 (6%)
Query: 45 DFPSSGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQV 103
+ SS D IRK FLD++A GH+V+ S+ LVP DPT+L T AGM+QFK FLG+ R
Sbjct: 7 NMKSSAD-IRKAFLDYFAQNGHEVVASSPLVPLNDPTLLFTNAGMVQFKDAFLGRDKRSY 65
Query: 104 PRAATSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEF 159
RAA+SQRC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK+EAI +AWEF T
Sbjct: 66 LRAASSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKREAINYAWEFLTRTL 125
Query: 160 GLPANRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG--------ADDNFWNSGATGPCG 211
GLPA +LW++VYE+DDEA +IW KE+GV R+G DNFW+ G TGPCG
Sbjct: 126 GLPAEKLWVTVYEEDDEAADIWLKEIGVSEARFTRIGDKPGGKRHESDNFWSMGDTGPCG 185
Query: 212 PCSEIYYDFHPD--RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLG 269
PCSEI+YD P+ G D R+IE +NLVFMQYN+ +G++ PL + ++DTG+G
Sbjct: 186 PCSEIFYDHGPEVAGGPPGTPEEDGDRYIEIWNLVFMQYNRDAEGNMTPLPKPSVDTGMG 245
Query: 270 LERIARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLL 329
LER+A ++Q V +NYE DL +IK ASE+ S Q +L++I DH+R+ +L+
Sbjct: 246 LERLAAVMQGVHSNYEIDLFANLIKAASEVTGCSNLQEK-----SLRVIADHIRSCAFLV 300
Query: 330 SDGVFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDS 389
DGV PSN GRG+V+RR+IRRA+R G +LG KG L G + EL +
Sbjct: 301 VDGVIPSNEGRGFVLRRIIRRAIRHGYMLGQKGAFFYRLVGPLCDEMGASYPELLS---- 356
Query: 390 DVKAREQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLY 449
+A +R+L K+EE RF +TLE+G ++L++++A E +P G F LY
Sbjct: 357 -ARALVERVL---KQEEERFAETLEQGMRILEEVIAGL-----EGKQIP---GATVFKLY 404
Query: 450 DTFGFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPD 509
DT+GFPV++T ++A E +++DM+GF EME QR +++AA + V+ + + +
Sbjct: 405 DTYGFPVDLTADIARERDLTLDMEGFRREMEAQRERARAAS---QFGVNQEVSVGLE-GE 460
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
TEF+GY+ L A A V +L +G+ + +++G V+L+RTPFYAESGGQ GD G +
Sbjct: 461 TEFVGYECLEANATVVALYRDGESLDSLAEGETGLVVLDRTPFYAESGGQAGDKGVISAK 520
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
G + EV+D +K G VF H G + EG L VG V A V+ RQ ++H+ATH
Sbjct: 521 GGV-----LFEVEDTRKQGGDVFGHIGKLEEGSLAVGDPVTAEVNAFTRQATALNHSATH 575
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
LL AAL++V+G +Q GSLV +RLRFDF+ P+ +L+ +E+ +N I ++++T
Sbjct: 576 LLHAALREVLGDHVAQKGSLVDDERLRFDFSQFEPVSREQLQRVEQRVNEQIRQNHMVET 635
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKI 716
++M+L+DA+ +GA+A+FGEKY EQV++
Sbjct: 636 RIMSLEDARSSGAMALFGEKYDEQVRV 662
>gi|386817728|ref|ZP_10104946.1| alanyl-tRNA synthetase [Thiothrix nivea DSM 5205]
gi|386422304|gb|EIJ36139.1| alanyl-tRNA synthetase [Thiothrix nivea DSM 5205]
Length = 870
Score = 567 bits (1460), Expect = e-158, Method: Compositional matrix adjust.
Identities = 305/678 (44%), Positives = 432/678 (63%), Gaps = 46/678 (6%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
+R++FLDF+AS+GH+++PS+SLVP DPT+L T AGM+QFK +FLG R RA +SQR
Sbjct: 6 LRQQFLDFFASKGHEIVPSSSLVPGNDPTLLFTNAGMVQFKDVFLGMDKRSYNRATSSQR 65
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI++AWEF T LP +LW
Sbjct: 66 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKEDAIKYAWEFLTDVLKLPKGKLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYYDF 220
++VY +DDEA+ IW +++G+P++ I R+G A DNFW G TGPCGPC+EI+YD
Sbjct: 126 VTVYAEDDEAYGIWTQKMGIPLDRITRIGDNKGARFASDNFWQMGDTGPCGPCTEIFYDH 185
Query: 221 --HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQ 278
H G D R+IE +NLVFMQY + DG + PL + ++DTG+G+ER+A ++Q
Sbjct: 186 GEHIWGGPPGTPEEDGDRYIEIWNLVFMQYERTKDGEMIPLPKPSVDTGMGMERLAAVMQ 245
Query: 279 KVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNI 338
V +NYE DL ++KKA+ELA + D N +LK++ DH+R+ +L+ DGV PSN
Sbjct: 246 GVHSNYEIDLFQTLLKKAAELA-----PNADPENPSLKVVADHIRSCSFLIVDGVLPSNE 300
Query: 339 GRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRI 398
GRGYV+RR+IRRA+R G LG + F + + + ++ + R+
Sbjct: 301 GRGYVLRRIIRRAIRHGYKLG--------MASPFFHKMVQPLVAEMGQAYPELAEAQSRV 352
Query: 399 LEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEI 458
E L++EE RF +TLE+G K+L+ + + T + G+ F LYDT+GFPV++
Sbjct: 353 EEALEKEERRFAETLEQGMKILEDAIGNMSGDT--------IDGETVFKLYDTYGFPVDL 404
Query: 459 TKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTL 518
T ++A E + +D GF++ M QR +++AA K D LA TEF GYD L
Sbjct: 405 TGDIARERNLKLDEAGFEVAMNAQRERARAAG---KFGTDYGEKLAVS-GATEFHGYDML 460
Query: 519 SAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAV 578
S + V SL G+ V + G + +V+L+ TPFYAESGGQ+GD G L+ + AV
Sbjct: 461 SETSTVVSLFRKGEAVTTLQAGDEGQVVLDHTPFYAESGGQVGDAGVLFTDK------AV 514
Query: 579 VEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKV 638
V D +K GS FVH G + G L G EV A VD RQ ++H+ATHL+ AAL++V
Sbjct: 515 FRVTDTRKQ-GSTFVHFGKLESGELSAGAEVTAEVDADRRQAIILNHSATHLMHAALRQV 573
Query: 639 IGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAK 698
+G Q GSLV DRLRFDF+ P+ ++ E+E ++N I +VM++DDAK
Sbjct: 574 LGTHVEQKGSLVTPDRLRFDFSQPEPVTAEQIAEVEAIVNREIRQNAATSAQVMSMDDAK 633
Query: 699 RAGAIAMFGEKYGEQVKI 716
+AGA+A+FGEKYG++V++
Sbjct: 634 QAGAMALFGEKYGDEVRV 651
>gi|375131999|ref|YP_004994099.1| alanyl-tRNA synthetase [Vibrio furnissii NCTC 11218]
gi|315181173|gb|ADT88087.1| alanyl-tRNA synthetase [Vibrio furnissii NCTC 11218]
Length = 860
Score = 566 bits (1459), Expect = e-158, Method: Compositional matrix adjust.
Identities = 308/686 (44%), Positives = 423/686 (61%), Gaps = 49/686 (7%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S D +R+ FL F+ S+GH+++ S+SLVP DPT+L T AGM QFK FLG R RA
Sbjct: 4 STDEVRRAFLSFFESKGHQIVDSSSLVPANDPTLLFTNAGMNQFKDCFLGLEKRAYTRAT 63
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
T+QRC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI++AWEF T LP
Sbjct: 64 TAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIKFAWEFLTEVLQLPK 123
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG--------ADDNFWNSGATGPCGPCSE 215
RL ++VY+ DDEAF+IWNK+VG+P + I R+G DNFW G TGPCGPC+E
Sbjct: 124 ERLLVTVYQTDDEAFDIWNKQVGIPADRIVRIGDKPGGKAYESDNFWQMGDTGPCGPCTE 183
Query: 216 IYYDF--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERI 273
I+YD H G D RFIE +N VFMQ+N+ DG +EPL + ++DTG+G+ERI
Sbjct: 184 IFYDHGEHIWGGRPGSPEEDGDRFIEIWNNVFMQFNRHADGKMEPLPKPSVDTGMGIERI 243
Query: 274 ARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGV 333
+ I+Q V +NYE D+ +IK A+++ + Y +D +N +L+++ DH+R+ +L+ DGV
Sbjct: 244 SAIMQGVHSNYEIDVFQTLIKAAADV--IGY---DDLSNQSLRVVADHIRSCAFLIVDGV 298
Query: 334 FPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKA 393
PSN GRGYV+RR+IRRAVR G LG K GAF + ++ ++K
Sbjct: 299 MPSNEGRGYVLRRIIRRAVRHGNKLGAK--------GAFFYKLVGPLADVMGSAGEELKK 350
Query: 394 REQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFG 453
+ + + L+ EE F +TL+RG +L++ L DALS T L G+ F LYDT+G
Sbjct: 351 QHAIVEKVLRIEEENFGRTLDRGMAILNEAL-DALSGT-------ELDGETVFKLYDTYG 402
Query: 454 FPVEITKEVAEEHGVSVDMKGFDIEMENQR-RQSQAAHNAVKLSVDDSADLAEKIPDTEF 512
FP ++T +VA E G ++D GF+ ME QR R +A H D L + TEF
Sbjct: 403 FPADLTNDVARERGFTIDEAGFEAAMEEQRQRAREAGHFGT-----DYNQLIKVEGATEF 457
Query: 513 LGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGT 572
GY ++ + + V G+ +S G ++LN TPFYAESGGQ GD G L G
Sbjct: 458 CGYSATQGESTITEMFVEGQAAASLSAGDKAIIVLNETPFYAESGGQCGDAGVLKTDAG- 516
Query: 573 NQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQ 632
V V D +K LG+ H G + EGV G V AIVD K R ++H+ATHLL
Sbjct: 517 -----VFHVVDTQK-LGNAIAHHGVMAEGVFAQGDTVHAIVDAKRRAAISLNHSATHLLH 570
Query: 633 AALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVM 692
AAL++V+G+ Q GSLV + LRFDF+ + EL+E+ERL+N + + ++T +M
Sbjct: 571 AALRRVLGEHVMQKGSLVRAEGLRFDFSHLEAVSAAELKEVERLVNEQVRTNHRIETNIM 630
Query: 693 ALDDAKRAGAIAMFGEKYGEQVKISS 718
+D AK GA+A+FGEKY EQV++ S
Sbjct: 631 DIDAAKAKGAMALFGEKYDEQVRVLS 656
>gi|153835573|ref|ZP_01988240.1| alanyl-tRNA synthetase [Vibrio harveyi HY01]
gi|148867838|gb|EDL67069.1| alanyl-tRNA synthetase [Vibrio harveyi HY01]
Length = 860
Score = 566 bits (1459), Expect = e-158, Method: Compositional matrix adjust.
Identities = 315/687 (45%), Positives = 433/687 (63%), Gaps = 51/687 (7%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S D +R FL F+ S+GH+++ S+SLVP DPT+L T AGM QFK FLG R RA
Sbjct: 4 STDEVRNAFLKFFESKGHQIVESSSLVPHNDPTLLFTNAGMNQFKDCFLGLEKRAYTRAT 63
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
T+QRC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI +AWEF T LPA
Sbjct: 64 TAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIAFAWEFLTETLKLPA 123
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG--------ADDNFWNSGATGPCGPCSE 215
+RL ++VYE DDEAF+IWNK+VGVP + I R+G DNFW G TGPCGPC+E
Sbjct: 124 DRLLVTVYETDDEAFDIWNKKVGVPADRIIRIGDKKGGKPFESDNFWQMGDTGPCGPCTE 183
Query: 216 IYYDF--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERI 273
I+YD H G D RFIE +N VFMQ+N++ DG++EPL + ++DTG+G+ERI
Sbjct: 184 IFYDHGEHIWGGRPGTPEEDGDRFIEIWNNVFMQFNRQADGTMEPLPKPSVDTGMGIERI 243
Query: 274 ARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGV 333
+ I+Q V +NYE D+ +IK A+E+ + Y D +N +L++I DH+R+ +L+ DGV
Sbjct: 244 SAIMQGVHSNYEIDVFQALIKAAAEV--IGY---EDLSNQSLRVIADHIRSCSFLIVDGV 298
Query: 334 FPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKA 393
PSN GRGYV+RR+IRRAVR G LG +G L G + EL
Sbjct: 299 MPSNEGRGYVLRRIIRRAVRHGNKLGAQGAFFHKLVGVLADIMGTAGEELK--------- 349
Query: 394 REQRILEELKR-EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTF 452
R+Q ++E++ R EE F +TLERG +L++ L D L G V L G+ F LYDT+
Sbjct: 350 RQQAVVEKVLRIEEENFGRTLERGMAILNEAL-DNL-----DGKV--LDGETVFKLYDTY 401
Query: 453 GFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKI-PDTE 511
GFP ++T +VA E ++D +GF+ ME QR++++ A N D +A A K+ TE
Sbjct: 402 GFPADLTNDVAREREFAIDEEGFEKAMEEQRQRAREAGN---FGTDYNA--AIKVDTQTE 456
Query: 512 FLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQG 571
F GY + V ++ V G V +S G ++L TPFYAESGGQ GD G + G
Sbjct: 457 FCGYTGTKGSSSVAAMFVEGNEVESLSAGDKAIIVLGETPFYAESGGQCGDAGEIRTESG 516
Query: 572 TNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLL 631
V V+D +K LG+ H G + EGVL G EV IVD + R ++H+ATHLL
Sbjct: 517 ------VFRVEDTQK-LGNAIAHHGVMAEGVLAKGDEVATIVDAERRAAISLNHSATHLL 569
Query: 632 QAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKV 691
AAL++++G+ +Q GSLV D LRFDF+ + EL+E+ERL+N I ++++T V
Sbjct: 570 HAALRQLLGEHVTQKGSLVKADGLRFDFSHLEAVTAAELKEVERLVNAQIRRNHVIETNV 629
Query: 692 MALDDAKRAGAIAMFGEKYGEQVKISS 718
M ++ AK+ GA+A+FGEKY ++V++ S
Sbjct: 630 MDIESAKKKGAMALFGEKYDDEVRVLS 656
>gi|330446966|ref|ZP_08310617.1| alanyl-tRNA synthetase [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328491157|dbj|GAA05114.1| alanyl-tRNA synthetase [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 874
Score = 566 bits (1459), Expect = e-158, Method: Compositional matrix adjust.
Identities = 304/686 (44%), Positives = 432/686 (62%), Gaps = 49/686 (7%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S D IR+ +L F+ S+GH+++ S+SLVP DPT+L T AGM QFK +FLG R RA
Sbjct: 4 STDEIRRAYLAFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDVFLGLEKRSYTRAT 63
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
T+QRC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AI +AWEF T LPA
Sbjct: 64 TAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKHDAIAYAWEFLTSVLKLPA 123
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG--------ADDNFWNSGATGPCGPCSE 215
+RL ++VYE DDEAF+IWNKEVG+P + I R+G DNFW G TGPCGPC+E
Sbjct: 124 DRLVVTVYETDDEAFDIWNKEVGIPADRIVRIGDKKGGKPFESDNFWQMGDTGPCGPCTE 183
Query: 216 IYYDFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLER 272
I+YD H D G D RFIE +N VFMQ+N++ DG++EPL + ++DTG+G+ER
Sbjct: 184 IFYD-HGDHIWGGRPGTPEEDGDRFIEIWNNVFMQFNRQADGTMEPLPKPSVDTGMGIER 242
Query: 273 IARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDG 332
IA I+Q V +NYE D+ +IK+A+++ +D +N +L+++ DH+R+ YL+SDG
Sbjct: 243 IAAIMQGVHSNYEIDIFQTLIKEAAKVIGF-----DDLSNQSLRVVADHIRSCAYLISDG 297
Query: 333 VFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVK 392
V PSN GRGYV+RR+IRRAVR G LG +GAF + E+ ++K
Sbjct: 298 VMPSNEGRGYVLRRIIRRAVRHGNKLGA--------QGAFFYKLVGPLAEIMGTAGEELK 349
Query: 393 AREQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTF 452
A+++ + + LK EE F +TL+RG +L++ L + + L G+ F LYDT+
Sbjct: 350 AQQELVEKVLKIEEDNFGRTLDRGLTILNEALDNLDGKV--------LDGETVFKLYDTY 401
Query: 453 GFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEF 512
GFP ++T +VA E G S+D +GF+ ME QR++++ A N VD + D + +TEF
Sbjct: 402 GFPADLTNDVARERGFSIDEEGFEAAMEEQRQRARDAGN---FGVDYN-DAIKVDAETEF 457
Query: 513 LGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGT 572
GY + + +L +G V V+ G D V+L TPFYAESGGQ GD G L
Sbjct: 458 CGYSATDGEGEIVALYRDGVAVDSVNAGEDALVVLTNTPFYAESGGQCGDSGIL------ 511
Query: 573 NQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQ 632
+ + V D +K G+ HKG + EG L VG+++ A VD R ++H+ATHL+
Sbjct: 512 TAEGVLFNVADTQK-FGAAIGHKGQVAEGTLTVGQKLTASVDSARRAAISLNHSATHLMH 570
Query: 633 AALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVM 692
AAL+ ++G+ +Q GSLV D LRFDF+ + +L +E ++N I D + ++T +M
Sbjct: 571 AALRNILGEHVAQKGSLVKADGLRFDFSNLEAVKPEQLRAVEIMVNDQIRDNHAIETNIM 630
Query: 693 ALDDAKRAGAIAMFGEKYGEQVKISS 718
++ AK GA+A+FGEKY ++V++ S
Sbjct: 631 DIEAAKAKGAMALFGEKYDDEVRVLS 656
>gi|440229532|ref|YP_007343325.1| alanyl-tRNA synthetase [Serratia marcescens FGI94]
gi|440051237|gb|AGB81140.1| alanyl-tRNA synthetase [Serratia marcescens FGI94]
Length = 875
Score = 566 bits (1458), Expect = e-158, Method: Compositional matrix adjust.
Identities = 310/687 (45%), Positives = 427/687 (62%), Gaps = 62/687 (9%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRAYTRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI +AWE T E F LP +
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAIAYAWELLTGENWFNLPKEK 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEAF IW E+G+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYETDDEAFAIWQNEIGIPAERIIRIGDNKGAPFASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++ PL + ++DTG+GLERI
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMLPLPKPSVDTGMGLERITA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NYE DL +I +++ + D N +L++I DH+R+ +L+SDGV P
Sbjct: 247 VLQHVNSNYEIDLFRTLIAAVAKVTGAT-----DLDNKSLRVIADHIRSCAFLVSDGVIP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K F + IE+ ++K+++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAKD--------TFFYKLVAPLIEVMGPAAEELKSQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
+ + LK EE +F +TLERG LLD+ L+ T L G+ AF LYDT+GFP
Sbjct: 354 AMVEQVLKTEEEQFARTLERGLALLDEELSKLQGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQ------AAHNAVKLSVDDSADLAEKIPD 509
V++T +V E G+ VD GFD ME QRR+++ A +N++ + VD +
Sbjct: 406 VDLTADVCRERGLKVDEAGFDEAMEAQRRRARESSGFGADYNSM-IRVDGT--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD +A V +L +G+PV + G D V+L+ TPFY ESGGQ+GD G L
Sbjct: 456 SEFCGYDHDKLQAKVTALFRDGQPVEAIHAGEDAVVVLDSTPFYGESGGQVGDKGVLKAA 515
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
A V D +K G H+G + +G L+VG V+A +D R R +++H+ATH
Sbjct: 516 ------AAEFVVADTQK-YGQALGHQGKLAQGTLKVGDSVDAEIDQARRNRIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
LL AL++V+G+ +Q GSLV LRFDF+ + +L +E L+N + +QT
Sbjct: 569 LLHEALRQVLGEHVAQKGSLVNDKYLRFDFSHFEAIKPEQLRAVEDLVNQQVRRNLPVQT 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKI 716
+VMAL+DAK GA+A+FGEKY + V++
Sbjct: 629 EVMALEDAKEKGAMALFGEKYDDHVRV 655
>gi|33152493|ref|NP_873846.1| alanyl-tRNA synthetase [Haemophilus ducreyi 35000HP]
gi|38372509|sp|Q7VLK0.1|SYA_HAEDU RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|33148716|gb|AAP96235.1| alanyl-tRNA synthetase [Haemophilus ducreyi 35000HP]
Length = 874
Score = 566 bits (1458), Expect = e-158, Method: Compositional matrix adjust.
Identities = 312/686 (45%), Positives = 437/686 (63%), Gaps = 60/686 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH V+PS++LVPE DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 7 IRQSFLDFFNSKGHTVVPSSALVPENDPTLLFTNAGMNQFKDVFLGLEKRPYTRATTAQR 66
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEM+GNFSFGDYFK +AIQ+AWEF T E LP +
Sbjct: 67 CVRAGGKHNDLENVGYTARHHTFFEMMGNFSFGDYFKHDAIQFAWEFLTSEKWLHLPKEK 126
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
L+++VYE DDEA++IW+K VGVP EHI R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 127 LYVTVYETDDEAYDIWHKTVGVPSEHIIRIGDNKGVPYASDNFWAMGDTGPCGPCTEIFY 186
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H + G D R+IE +N+VFMQ+N++ DG+L L + ++DTG+GLER+
Sbjct: 187 D-HGESFWGGLPGTAEEDGDRYIEVWNIVFMQFNRQADGTLAKLPKPSVDTGMGLERMTA 245
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
++Q V +NYETD+ +IK+ + L +V+ D N +L++I DH+RA YL+ DGV P
Sbjct: 246 VMQHVNSNYETDIFQTLIKEVATLLHVA-----DLDNKSLRVIADHIRACSYLIVDGVIP 300
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAF---LPSIAEKAIELSTHIDSDVK 392
SN GRGYV+RR+IRRAVR G LLG K E F +P++A K + + I +D
Sbjct: 301 SNEGRGYVLRRIIRRAVRHGNLLGAK-------EAFFYKLVPTLA-KVMGQAGEILTD-- 350
Query: 393 AREQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTF 452
++ I + LK EE +F +TLERG LL++ L ++T LSG+ AF LYDT+
Sbjct: 351 -KQSYIQKTLKTEEEQFARTLERGLALLEEALTKVENQT--------LSGEVAFKLYDTY 401
Query: 453 GFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEF 512
GFP+++T +V E + +D F+IEM QR +++++ N D + + +T F
Sbjct: 402 GFPLDLTADVCRERDIVIDEASFEIEMTAQRERAKSSSNFGA----DYNSVIKVEAETAF 457
Query: 513 LGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGT 572
+GYD +A+A V +L NG+ V KV G V+L++TPFYAE GGQ+GD G +
Sbjct: 458 IGYDCFNAEAKVIALFSNGQAVDKVQSGESAVVVLDKTPFYAEMGGQVGDSGLI------ 511
Query: 573 NQQTAVVE--VKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHL 630
TA + V D +K G VF H G + G L +G + A VD RQ +H+ATHL
Sbjct: 512 --TTAFCQFAVADTQK-YGQVFGHIGQVVSGSLAIGDIISAQVDIARRQAITANHSATHL 568
Query: 631 LQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTK 690
L +AL++V+G+ Q GSLV+ + LRFDF+ + + +LEEIER++N I + +
Sbjct: 569 LHSALRQVLGEHVVQKGSLVSENVLRFDFSQSQAVSKAQLEEIERIVNRQIRQNLAVTIE 628
Query: 691 VMALDDAKRAGAIAMFGEKYGEQVKI 716
M ++ AK G +A+FGEKYG+ V++
Sbjct: 629 TMDIETAKEKGTVALFGEKYGDVVRV 654
>gi|291618585|ref|YP_003521327.1| alanyl-tRNA synthetase [Pantoea ananatis LMG 20103]
gi|291153615|gb|ADD78199.1| AlaS [Pantoea ananatis LMG 20103]
Length = 875
Score = 566 bits (1458), Expect = e-158, Method: Compositional matrix adjust.
Identities = 310/681 (45%), Positives = 425/681 (62%), Gaps = 50/681 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG+ R RA TSQR
Sbjct: 8 IRQAFLDFFNSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGQEKRDYTRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFKKEAI +AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKKEAIAFAWELLTGEQWFKLPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA++IW ++GVP E I R+G A DNFW G TGPCGPCSEI+Y
Sbjct: 128 LWVTVYETDDEAYDIWANDIGVPRERIIRIGDNKGSAYASDNFWQMGDTGPCGPCSEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++ PL + ++DTG+GLERI
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMLPLPKPSVDTGMGLERITA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NYE DL +I+ +++ + D N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYEIDLFQTLIEAVAKVTGAT-----DLNNKSLRVIADHIRSCAFLIADGVIP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K AF + I++ +++ ++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAKD--------AFFYKLVAPLIQVMGAAGEELQRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ LK EE +F +TLERG LLD+ LA T L G+ F LYDTFGFP
Sbjct: 354 AQVENVLKSEEEQFAKTLERGLALLDEELAKLQGDT--------LDGETVFRLYDTFGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGY 515
++T +V E + +D GF+ ME QR Q A A D S ++ + F GY
Sbjct: 406 ADLTADVCRERNLKIDEAGFEKAMEQQR---QRAREASGFGADYS-NVIRIDAASSFKGY 461
Query: 516 DTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
+ L A V+ L VNG+ V +S G D ++L+ TPFY ESGGQ+GD G L +G N
Sbjct: 462 EQLDLTATVKGLFVNGEAVDALSAGQDAVIVLDETPFYGESGGQVGDTGEL---KGNN-- 516
Query: 576 TAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAAL 635
A+ V+D +K G H G + G L VG +EA+VD R R +++H+ATHLL AAL
Sbjct: 517 -ALFSVQDTQK-YGQAIGHIGKLSSGQLRVGDCLEAVVDEARRARIRLNHSATHLLHAAL 574
Query: 636 KKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALD 695
++V+G+ +Q GSLV LRFDF+ + E+ ++E ++N I ++T+VM L+
Sbjct: 575 RQVLGEHVAQKGSLVNDKYLRFDFSHFEAMKPQEIRQVEDIVNAQIRRNLPVETRVMDLE 634
Query: 696 DAKRAGAIAMFGEKYGEQVKI 716
AK GA+A+FGEKY +QV++
Sbjct: 635 AAKAKGAMALFGEKYDQQVRV 655
>gi|24374938|ref|NP_718981.1| alanyl-tRNA synthetase AlaS [Shewanella oneidensis MR-1]
gi|38372525|sp|Q8EBS1.1|SYA_SHEON RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|24349653|gb|AAN56425.1| alanyl-tRNA synthetase AlaS [Shewanella oneidensis MR-1]
Length = 874
Score = 566 bits (1458), Expect = e-158, Method: Compositional matrix adjust.
Identities = 318/684 (46%), Positives = 433/684 (63%), Gaps = 56/684 (8%)
Query: 52 SIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQ 110
++R FL+F+ S GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA T+Q
Sbjct: 7 ALRSAFLEFFRSNGHQVVDSSSLVPGNDPTLLFTNAGMNQFKDVFLGMDKRSYTRATTAQ 66
Query: 111 RCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRL 166
RC+R ND++NVG T+RHHTFFEMLGNFSFGDYFK++AI++ W F T LP RL
Sbjct: 67 RCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKEDAIRFGWTFLTEVLMLPKERL 126
Query: 167 WISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYYD 219
+++Y+ DDEAFEIWNK++GV E+I R+G A DNFW G TGPCGPC+EI+YD
Sbjct: 127 CVTIYQTDDEAFEIWNKKIGVAAENIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFYD 186
Query: 220 FHPD-----RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIA 274
H D R S + GD RFIE +N+VFMQYN++ G + PL + ++DTG+G+ERIA
Sbjct: 187 -HGDHIWGGRPGSPEEDGD--RFIEIWNIVFMQYNRQASGEMLPLPKPSVDTGMGIERIA 243
Query: 275 RILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVF 334
I+Q V +NYE D+ +I KA+E+ V+ D +N +L++I DH+R+ +L++DGV
Sbjct: 244 AIMQGVHSNYEIDIFRALIAKAAEIIGVA-----DLSNKSLRVIADHIRSCAFLVADGVM 298
Query: 335 PSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAR 394
PSN GRGYV+RR+IRRAVR G LG AF + I++ + A
Sbjct: 299 PSNEGRGYVLRRIIRRAVRHGNKLGATE--------AFFYKLVPTLIDVMGDAAKGL-AE 349
Query: 395 EQRILEE-LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFG 453
Q I+E+ LK EE +F +TLERG +LD L + T L G+ F LYDT+G
Sbjct: 350 TQVIVEKALKAEEEQFARTLERGLGILDSALNELQGDT--------LDGETVFKLYDTYG 401
Query: 454 FPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKI-PDTEF 512
FPV++T +V E + VD GF+ M QR ++QAA N D +A L KI +T F
Sbjct: 402 FPVDLTADVCRERNIIVDEAGFEAAMAEQRSRAQAAGN---FGADYNAAL--KIDAETAF 456
Query: 513 LGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGT 572
GY L+ A V +L +NG+ V ++ G D V+L+ TPFYAESGGQ+GD G L + QG
Sbjct: 457 CGYSELTGNAKVTALYLNGESVPAINTGDDAVVVLDVTPFYAESGGQVGDKGVL-MAQGI 515
Query: 573 NQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQ 632
V D +K G HKGT+ G L VG+ +EA VD KLR R +++H+ THLL
Sbjct: 516 E-----FTVNDTQK-FGQASGHKGTLTAGSLSVGQVLEAKVDKKLRHRTQLNHSVTHLLH 569
Query: 633 AALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVM 692
AAL++V+G +Q GSLV +RLRFDF+ + EL+++E L+N I + L+ M
Sbjct: 570 AALRQVLGTHVTQKGSLVDPERLRFDFSHFEAVKPFELKQVEELVNTQIRRNHELKVAEM 629
Query: 693 ALDDAKRAGAIAMFGEKYGEQVKI 716
A+D+AK GA+A+FGEKY QV++
Sbjct: 630 AIDEAKEKGAMALFGEKYDSQVRV 653
>gi|226940409|ref|YP_002795483.1| alanyl-tRNA synthetase [Laribacter hongkongensis HLHK9]
gi|226715336|gb|ACO74474.1| Sya [Laribacter hongkongensis HLHK9]
Length = 877
Score = 566 bits (1458), Expect = e-158, Method: Compositional matrix adjust.
Identities = 314/684 (45%), Positives = 439/684 (64%), Gaps = 53/684 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+++LDF+AS+GH+++PS+SLVP EDPT+L T AGM QFK +FLG R RA TSQ+
Sbjct: 6 IRQKYLDFFASKGHQIVPSSSLVPWEDPTLLFTNAGMNQFKDVFLGFDKRPYTRATTSQK 65
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI +AWEF T GLP +
Sbjct: 66 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAIHYAWEFLTDPKWLGLPKEK 125
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
L ++VY DDEAF+IWNKE+GVP E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 126 LMVTVYASDDEAFDIWNKEIGVPAEKIVRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 185
Query: 219 DFHPDR------GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLER 272
D H D G D D GD RFIE +N VFMQ+N+ +DG + PL + ++DTG+GLER
Sbjct: 186 D-HGDHIWGGPPGSPDED-GD--RFIEIWNNVFMQFNRTEDGVMNPLPKPSVDTGMGLER 241
Query: 273 IARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDG 332
I+ +LQ V +NYE DL +I+ A+ V ++ +LK+I DH+RA +L++DG
Sbjct: 242 ISAVLQGVHSNYEIDLFQNLIRAAARETGVPFSMDEP----SLKVIADHIRACSFLIADG 297
Query: 333 VFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVK 392
V PSN GRGYV+RR+IRRA+R G LG KG F + + +++
Sbjct: 298 VMPSNDGRGYVLRRIIRRAIRHGYKLGQKG--------LFFHRLVTDLVAEMGDAYPELR 349
Query: 393 AREQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTF 452
A++ I +ELK+EE++F +TL++G LL++ L D V L G+ AF LYDT+
Sbjct: 350 AKQALIEDELKKEEIKFAETLDKGMALLEEALKDG---------VQVLDGKTAFQLYDTY 400
Query: 453 GFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEF 512
GFP+++T ++ E + VD GFD ME QR QS+AA + K+ L DT F
Sbjct: 401 GFPLDLTADICRERDLQVDQDGFDAAMEAQRAQSRAA-STFKMG----GKLEYAGDDTRF 455
Query: 513 LGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGT 572
GY +A+ + +L +G+PV +S G V+L+RTPFYAE GGQIGD G L T G
Sbjct: 456 EGYAESTAEGRILALYKDGQPVDTLSAGDSGVVVLDRTPFYAEGGGQIGDTGTLAATGGL 515
Query: 573 NQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQ 632
+ A+ +V D +K + F H+G + G L+ G V A +D R+ + +H+ THL+
Sbjct: 516 D---ALFDVLDTQKVTAAAFGHEGRLVRGQLKTGMTVVATIDLHRRRAIQRNHSVTHLMH 572
Query: 633 AALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVM 692
AAL+ V+G+ +Q GSLV +R RFDF+ H P+ ++ EIER++N IG + ++M
Sbjct: 573 AALRDVLGKHVTQKGSLVTAERTRFDFSHHEPVSAEQMAEIERIVNFVIGANYDVSARLM 632
Query: 693 ALDDAKRAGAIAMFGEKYGEQVKI 716
++DDA++ GA+A+FGEKYG+ V++
Sbjct: 633 SMDDAQKLGAMALFGEKYGDVVRV 656
>gi|257465412|ref|ZP_05629783.1| alanyl-tRNA synthetase [Actinobacillus minor 202]
gi|257451072|gb|EEV25115.1| alanyl-tRNA synthetase [Actinobacillus minor 202]
Length = 874
Score = 566 bits (1458), Expect = e-158, Method: Compositional matrix adjust.
Identities = 308/681 (45%), Positives = 435/681 (63%), Gaps = 50/681 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH V+ S+SLVPE DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 7 IRQSFLDFFQSKGHTVVESSSLVPENDPTLLFTNAGMNQFKDVFLGLEKRPYTRATTAQR 66
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEM+GNFSFGDYFK++AIQ+ WE+ T GLP +
Sbjct: 67 CVRAGGKHNDLENVGYTARHHTFFEMMGNFSFGDYFKQDAIQFGWEYLTSPQWLGLPKEK 126
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
L+++VYE DDEA++IW+K VGVP +HI R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 127 LYVTVYETDDEAYDIWHKIVGVPADHIIRIGDNKGAPYASDNFWAMGDTGPCGPCTEIFY 186
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D+ G D RFIE +N+VFMQ+N++ DG++E L + ++DTG+GLER+
Sbjct: 187 D-HGDKYWGGLPGTPEEDGDRFIEVWNIVFMQFNRQADGTMEKLPKPSVDTGMGLERMTA 245
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
++Q V +NYE D+ +IK +EL NV D N +L++I DH+R+ YL++DGV P
Sbjct: 246 VMQHVNSNYEIDIFQTLIKTIAELLNVK-----DLDNKSLRVIADHIRSCSYLIADGVAP 300
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN GRGYV+RR+IRRAVR G +LG K AF + ++ H V ++
Sbjct: 301 SNEGRGYVLRRIIRRAVRHGNILGAKE--------AFFYKLVPTLAQVMGHAGEIVAQKQ 352
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
I + LK EE +F +TLERG LL+ DAL++ + LSG AF LYDT+GFP
Sbjct: 353 AHIQKTLKAEEEQFARTLERGLALLE----DALTKVENN----TLSGDVAFKLYDTYGFP 404
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGY 515
+++T +V E + +D GF+ EM+ QR +++A+ N VD + ++ + T+F+GY
Sbjct: 405 LDLTADVCRERNIVIDEAGFEAEMQAQRERAKASSN---FGVDYN-NVIKVDGKTDFIGY 460
Query: 516 DTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
D L+A+A V L NG V V G + ++L++TPFYAE GGQ+GD G + + +
Sbjct: 461 DNLTAEATVVGLFSNGNAVDVVKSGENAIIILDKTPFYAEMGGQVGDSGRI------STE 514
Query: 576 TAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAAL 635
V D +K G VF H G I G L+VG +V A V + R +++H+ATHLL +AL
Sbjct: 515 FCQFHVVDTQK-YGQVFGHIGQIEAGELKVGDKVTAEVAAERRHSIQLNHSATHLLHSAL 573
Query: 636 KKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALD 695
++V+G Q GSLV + LRFDF+ + +LE IER++N I + + + M ++
Sbjct: 574 REVLGTHVMQKGSLVNENGLRFDFSQPEAITKEQLEAIERIVNAKIRENIEVVIEEMGIE 633
Query: 696 DAKRAGAIAMFGEKYGEQVKI 716
+AK GA+A+FGEKYG+ V++
Sbjct: 634 EAKAKGAMALFGEKYGDVVRV 654
>gi|323492975|ref|ZP_08098113.1| alanyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
gi|323312806|gb|EGA65932.1| alanyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
Length = 860
Score = 566 bits (1458), Expect = e-158, Method: Compositional matrix adjust.
Identities = 313/686 (45%), Positives = 427/686 (62%), Gaps = 49/686 (7%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S D +R FL F+ S+GH+++ S+SLVP DPT+L T AGM QFK FLG R RA
Sbjct: 4 STDEVRNAFLKFFESKGHQIVDSSSLVPHNDPTLLFTNAGMNQFKDCFLGAEKRAYTRAT 63
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
T+QRC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI +AWEF T LP
Sbjct: 64 TAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIAFAWEFLTETLQLPK 123
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG--------ADDNFWNSGATGPCGPCSE 215
+RL ++VYE DDEAFEIWNK VGVP + I R+G DNFW G TGPCGPC+E
Sbjct: 124 DRLLVTVYETDDEAFEIWNKTVGVPADRIVRIGDKEGGKQYESDNFWTMGDTGPCGPCTE 183
Query: 216 IYYDF--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERI 273
I+YD H G D RFIE +N VFMQ+N+ DG++EPL + +DTG+G+ERI
Sbjct: 184 IFYDHGEHIWGGRPGTPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPAVDTGMGIERI 243
Query: 274 ARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGV 333
+ I+Q V +NYE D+ +IK A+E + Y D +N +L++I DH+R+ +L+ DGV
Sbjct: 244 SAIMQGVHSNYEIDVFQKLIKAAAE--TIGY---EDLSNQSLRVIADHIRSCSFLIVDGV 298
Query: 334 FPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKA 393
PSN GRGYV+RR+IRRAVR G LG KG L G + EL
Sbjct: 299 MPSNEGRGYVLRRIIRRAVRHGNKLGAKGVFFHKLVGVLAEVMGTAGEELK--------- 349
Query: 394 REQRILEELKR-EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTF 452
++Q ++E++ R EE F +TLERG +L++ L D L G V L G+ F LYDT+
Sbjct: 350 KQQAVVEKVLRIEEENFGRTLERGMAILNEAL-DNL-----DGKV--LDGETVFKLYDTY 401
Query: 453 GFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEF 512
GFP ++T +VA E ++D +GF+ ME QR Q A A + D +A + + +TEF
Sbjct: 402 GFPADLTNDVARERDFAIDEEGFEKAMEEQR---QRAREAGQFGTDYNATIKTE-AETEF 457
Query: 513 LGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGT 572
GY + V + V G+ +S G ++L TPFYAESGGQ GD G L G
Sbjct: 458 CGYTGTQGNSNVAEIFVEGEAAESLSAGDKAIIILGETPFYAESGGQCGDAGVLKTESG- 516
Query: 573 NQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQ 632
+ +V+D +K LG+ H G + EGVL G EVEA+VD + R ++H+ATHLL
Sbjct: 517 -----LFKVEDTQK-LGNAIAHHGVLAEGVLAKGDEVEAVVDAERRASISLNHSATHLLH 570
Query: 633 AALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVM 692
AAL+ V+G+ +Q GSLV + LRFDF+ + EL+E+ERL+N + ++++T VM
Sbjct: 571 AALRTVLGEHVTQKGSLVKPENLRFDFSHLEAVTPAELKEVERLVNAQVRRNHVIETNVM 630
Query: 693 ALDDAKRAGAIAMFGEKYGEQVKISS 718
++ AK+ GA+A+FGEKY ++V++ S
Sbjct: 631 DIESAKQKGAMALFGEKYDDEVRVLS 656
>gi|304399190|ref|ZP_07381057.1| alanyl-tRNA synthetase [Pantoea sp. aB]
gi|304353244|gb|EFM17624.1| alanyl-tRNA synthetase [Pantoea sp. aB]
Length = 875
Score = 566 bits (1458), Expect = e-158, Method: Compositional matrix adjust.
Identities = 308/681 (45%), Positives = 428/681 (62%), Gaps = 50/681 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG+ R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHEVVTSSSLVPNNDPTLLFTNAGMNQFKDVFLGQDKRDYTRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK+EAI +AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKREAIGFAWELLTSEQWFSLPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEAF+IW E+GVP E I R+G A DNFW G TGPCGPCSEI+Y
Sbjct: 128 LWVTVYETDDEAFDIWANEIGVPRERIIRIGDNKGSAYASDNFWQMGDTGPCGPCSEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++ PL + ++DTG+GLERI+
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMLPLPKPSVDTGMGLERISA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NYE DL +I+ +++ + D +N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYEIDLFQKLIQAVAQVTGAT-----DLSNKSLRVIADHIRSCAFLIADGVIP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K AF + IE+ +++ ++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAKE--------AFFYKLVAPLIEVMGAAGEELQRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ L T L G+ F LYDTFGFP
Sbjct: 354 AQVEQVLKSEEDQFARTLERGLALLDEELEKLQGDT--------LDGEIVFRLYDTFGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGY 515
++T +V E + +D GF+ ME QR Q A A D S ++ + F GY
Sbjct: 406 ADLTADVCRERNLKIDEAGFEQAMEQQR---QRAREASGFGADYS-NVIRIDAASSFKGY 461
Query: 516 DTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
D L A V++L V G+ V +V+ G D V+L+ TPFY ESGGQ+GD G L +G N +
Sbjct: 462 DQLDLAATVKALYVAGEAVDEVTAGQDAVVVLDETPFYGESGGQVGDTGLL---KGKNAE 518
Query: 576 TAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAAL 635
+V + + +++G H G + G L +G +EA VD R R +++H+ATHLL AAL
Sbjct: 519 FSVQDTQKYGQAIG----HVGKLTAGQLRIGDRLEAQVDAARRARIRLNHSATHLLHAAL 574
Query: 636 KKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALD 695
++V+G+ +Q GSLV LRFDF+ + E+ ++E ++N I ++T+VM LD
Sbjct: 575 RQVLGEHVAQKGSLVNDKYLRFDFSHFEAMKPQEIRQVEDIVNAQIRRNLPVETEVMDLD 634
Query: 696 DAKRAGAIAMFGEKYGEQVKI 716
AK GA+A+FGEKY ++V++
Sbjct: 635 AAKSKGAMALFGEKYDQRVRV 655
>gi|421525637|ref|ZP_15972247.1| alanyl-tRNA ligase [Fusobacterium nucleatum ChDC F128]
gi|402258206|gb|EJU08678.1| alanyl-tRNA ligase [Fusobacterium nucleatum ChDC F128]
Length = 867
Score = 566 bits (1458), Expect = e-158, Method: Compositional matrix adjust.
Identities = 290/674 (43%), Positives = 437/674 (64%), Gaps = 35/674 (5%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
+G+ IR++F++F+ + HK SASL+P+DPT+LLT+AGM+ FKP FLG+ PR T
Sbjct: 3 TGNEIREKFIEFFMQKQHKHFESASLIPDDPTLLLTVAGMVPFKPYFLGQKEAPCPRVTT 62
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
Q+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFKKEAI+W+WEF T L ++LWI
Sbjct: 63 YQKCIRTNDLENVGRTARHHTFFEMLGNFSFGDYFKKEAIKWSWEFVTEVLKLNKDKLWI 122
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYD----FHPDR 224
+V+ DDEA +IW +E P E I RMG +N+W++G TG CGPCSEI+ D + D
Sbjct: 123 TVFTTDDEAEKIWIEECNFPKERIVRMGESENWWSAGPTGSCGPCSEIHVDLGVQYGGDE 182
Query: 225 GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNY 284
D G D RFIE +NLVF ++N+ +DGSLEPL +KNIDTG GLERIA ++Q NN+
Sbjct: 183 NSKIGDEGTDNRFIEIWNLVFTEWNRMEDGSLEPLPKKNIDTGAGLERIAAVVQGKANNF 242
Query: 285 ETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVV 344
ETDL+FPI+++A+++ Y + N TN +LK+I DH RA+ +L++DGV PSN GRGY++
Sbjct: 243 ETDLLFPILEEAAKITGSQYGK-NSETNFSLKVITDHARAVTFLVNDGVIPSNEGRGYIL 301
Query: 345 RRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKR 404
RR++RRAVR GRLLG F+ + +K +E D++ + I + +K
Sbjct: 302 RRILRRAVRHGRLLGYT--------DLFMYKMVDKVVEKFEVAYPDLRKNLENIRKIVKI 353
Query: 405 EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAE 464
EE +F TL++G +L++Q + + L+ + +L G+ +F LYDT+GFP E+T+E+AE
Sbjct: 354 EEEKFSNTLDQGIQLVNQEIDNLLANGKN-----KLDGEISFKLYDTYGFPYELTEEIAE 408
Query: 465 EHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDS--ADLAEKIPDTEFLGYDTLSAKA 522
E GV+V + F+ +ME Q+ ++++A V DS + +K T+F GY+ + +
Sbjct: 409 ERGVTVLREEFEAKMEEQKEKARSAREVVMEKGQDSFIEEFYDKYGITKFTGYEKIEDEG 468
Query: 523 IVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVK 582
+ S I+ +K ++ ++TPFYAESGGQ+GD G +Y N + V++V+
Sbjct: 469 KLLS--------IREAKDGKYLLIFDKTPFYAESGGQVGDQGKIY---SDNFEAKVLDVQ 517
Query: 583 DVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQE 642
K +F+H ++G+ E + + VD R +HTATHLL AL++++G
Sbjct: 518 KQK----DIFIHTVEFKKGMAEENKTYKLEVDAVKRLDTAKNHTATHLLHKALREIVGTH 573
Query: 643 TSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGA 702
QAGSLV ++LRFDF+ + + +L +IE ++N I ++ + ++++AK+ GA
Sbjct: 574 VQQAGSLVDSEKLRFDFSHYEAVTAEQLSKIEDIVNEKIRESIEVDVSHHSIEEAKKLGA 633
Query: 703 IAMFGEKYGEQVKI 716
+ +FG+KYG+ V++
Sbjct: 634 MMLFGDKYGDVVRV 647
>gi|27364961|ref|NP_760489.1| alanyl-tRNA synthetase [Vibrio vulnificus CMCP6]
gi|29611879|sp|Q8DC49.1|SYA_VIBVU RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|27361107|gb|AAO10016.1| alanyl-tRNA synthetase [Vibrio vulnificus CMCP6]
Length = 860
Score = 565 bits (1457), Expect = e-158, Method: Compositional matrix adjust.
Identities = 309/687 (44%), Positives = 430/687 (62%), Gaps = 51/687 (7%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S D +R FL F+ S+GH+++ S+SLVP DPT+L T AGM QFK FLG R RA
Sbjct: 4 STDEVRNAFLKFFESKGHQIVDSSSLVPHNDPTLLFTNAGMNQFKDCFLGAEKRAYTRAT 63
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
T+QRC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI +AWEF T LP
Sbjct: 64 TAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIAFAWEFLTETLKLPK 123
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG--------ADDNFWNSGATGPCGPCSE 215
+RL ++VYE DDEAF+IWN++VGVP + I R+G DNFW G TGPCGPC+E
Sbjct: 124 DRLLVTVYETDDEAFDIWNQKVGVPADRIIRIGDKKGGKQYESDNFWTMGDTGPCGPCTE 183
Query: 216 IYYDF--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERI 273
I+YD H G D RFIE +N VFMQ+N+ DG++EPL + ++DTG+G+ERI
Sbjct: 184 IFYDHGEHIWGGRPGTPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPSVDTGMGIERI 243
Query: 274 ARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGV 333
+ I+Q V +NYE D+ +IK +E+ D +N +L++I DH+R+ +L++DGV
Sbjct: 244 SAIMQGVHSNYEIDVFQKLIKATAEIVGCE-----DLSNQSLRVIADHIRSCSFLIADGV 298
Query: 334 FPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKA 393
PSN GRGYV+RR+IRRAVR G LG +G L G ++ A EL
Sbjct: 299 MPSNEGRGYVLRRIIRRAVRHGNKLGAQGVFFHKLVGVLAEAMGSAADELK--------- 349
Query: 394 REQRILEELKR-EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTF 452
++Q ++E++ R EE F +TLERG +L++ L DAL L G+ F LYDT+
Sbjct: 350 KQQAVVEKVLRIEEENFGRTLERGMVILNEAL-DALEG-------KELDGETVFKLYDTY 401
Query: 453 GFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKI-PDTE 511
GFP ++T +VA E ++D GF+ ME QR Q A A + D +A + K+ +E
Sbjct: 402 GFPADLTNDVAREREFTIDEAGFEKAMEEQR---QRAREAGQFGTDYNAKI--KVDAQSE 456
Query: 512 FLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQG 571
F GY + ++ V +L V G+ +S G V+L TPFYAESGGQ GD G L G
Sbjct: 457 FCGYTSTQERSDVVALFVEGEETATLSAGDKAIVILQETPFYAESGGQCGDSGVLKTESG 516
Query: 572 TNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLL 631
+ +V+D +K LG+ H G + EGVL G +V AIVD + R ++H+ATHLL
Sbjct: 517 ------LFQVEDTQK-LGNAIAHHGVLVEGVLAKGDQVTAIVDAERRAAISLNHSATHLL 569
Query: 632 QAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKV 691
AAL++V+G+ +Q GSLV + LRFDF+ + EL+E+ERL+N I + ++T +
Sbjct: 570 HAALRQVLGEHVAQKGSLVKAENLRFDFSHLEAVTAAELKEVERLVNAQIRRNHAIETNI 629
Query: 692 MALDDAKRAGAIAMFGEKYGEQVKISS 718
M ++ AK+ GA+A+FGEKY ++V++ S
Sbjct: 630 MDIESAKQKGAMALFGEKYDDEVRVLS 656
>gi|418025430|ref|ZP_12664408.1| alanyl-tRNA synthetase [Shewanella baltica OS625]
gi|353535042|gb|EHC04606.1| alanyl-tRNA synthetase [Shewanella baltica OS625]
Length = 874
Score = 565 bits (1457), Expect = e-158, Method: Compositional matrix adjust.
Identities = 317/683 (46%), Positives = 429/683 (62%), Gaps = 56/683 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
+R FL+F+ S GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 8 LRSAFLEFFRSNGHQVVDSSSLVPGNDPTLLFTNAGMNQFKDVFLGMDKRNYTRATTAQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
C+R ND++NVG T+RHHTFFEMLGNFSFGDYFK+EAI++ W F T LP RL
Sbjct: 68 CVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKEEAIRFGWTFLTETLKLPKERLC 127
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYYDF 220
+++Y+ DDEAFEIWNK++GV E+I R+G A DNFW G TGPCGPC+EI+YD
Sbjct: 128 VTIYQTDDEAFEIWNKKIGVAAENIIRIGDNKGAAYASDNFWQMGDTGPCGPCTEIFYD- 186
Query: 221 HPD-----RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
H D R S + GD RFIE +N+VFMQYN++ G + PL + ++DTG+G+ERIA
Sbjct: 187 HGDHIWGGRPGSPEEDGD--RFIEIWNIVFMQYNRQASGEMLPLPKPSVDTGMGIERIAA 244
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
I+Q V +NYE D+ +I KA+E+ VS D T +L++I DH+R+ +L++DGV P
Sbjct: 245 IMQGVHSNYEIDIFRTLIAKAAEIIGVS-----DLTEKSLRVIADHIRSCAFLIADGVMP 299
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN GRGYV+RR+IRRAVR G LG L + + + + A L A
Sbjct: 300 SNEGRGYVLRRIIRRAVRHGNKLGATEAFFYKLVPSLIAVMGDAAKGL---------AET 350
Query: 396 QRILEE-LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGF 454
Q I+E+ LK EE +F +TLERG +LD L + T L G+ F LYDT+GF
Sbjct: 351 QAIVEKALKAEEEQFARTLERGLGILDTALNELKGNT--------LDGETVFKLYDTYGF 402
Query: 455 PVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKI-PDTEFL 513
P+++T +V E + VD GF++ M QR ++QAA N D +A L KI +T F
Sbjct: 403 PIDLTADVCRERNIIVDEAGFEVAMAEQRSRAQAAGN---FGADYNAAL--KIDAETAFS 457
Query: 514 GYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTN 573
GY L+ +A + ++ NG+ V + G + V+L+ TPFYAESGGQ+GD G L V G
Sbjct: 458 GYTELAGQAKITAIYQNGESVTAIKAGDEAVVVLDVTPFYAESGGQVGDKGQL-VANGVE 516
Query: 574 QQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQA 633
V D +K G H+G + G L VG+ VEA VD KLR R +++H+ THLL A
Sbjct: 517 -----FTVNDTQK-YGQATGHQGVLATGNLSVGQVVEAKVDKKLRHRTQLNHSVTHLLHA 570
Query: 634 ALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMA 693
AL++V+G SQ GSLV +RLRFDF+ + EL+E+E L+N I + L+T M
Sbjct: 571 ALRQVLGTHVSQKGSLVDPERLRFDFSHFEGVKAAELKEVEELVNTQIRRNHELKTAEMG 630
Query: 694 LDDAKRAGAIAMFGEKYGEQVKI 716
+D+AK GA+A+FGEKY QV++
Sbjct: 631 IDEAKEKGAMALFGEKYDSQVRV 653
>gi|373950460|ref|ZP_09610421.1| alanyl-tRNA synthetase [Shewanella baltica OS183]
gi|386323703|ref|YP_006019820.1| alanyl-tRNA synthetase [Shewanella baltica BA175]
gi|333817848|gb|AEG10514.1| alanyl-tRNA synthetase [Shewanella baltica BA175]
gi|373887060|gb|EHQ15952.1| alanyl-tRNA synthetase [Shewanella baltica OS183]
Length = 874
Score = 565 bits (1457), Expect = e-158, Method: Compositional matrix adjust.
Identities = 319/683 (46%), Positives = 429/683 (62%), Gaps = 56/683 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
+R FL+F+ S GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 8 LRSAFLEFFRSNGHQVVDSSSLVPGNDPTLLFTNAGMNQFKDVFLGMDKRNYTRATTAQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
C+R ND++NVG T+RHHTFFEMLGNFSFGDYFK+EAI++ W F T LP RL
Sbjct: 68 CVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKEEAIRFGWTFLTETLKLPKERLC 127
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYYDF 220
+++Y+ DDEAFEIWNK++GV E+I R+G A DNFW G TGPCGPCSEI+YD
Sbjct: 128 VTIYQTDDEAFEIWNKKIGVAAENIIRIGDNKGAAYASDNFWQMGDTGPCGPCSEIFYD- 186
Query: 221 HPD-----RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
H D R S + GD RFIE +N+VFMQYN++ G + PL + ++DTG+G+ERIA
Sbjct: 187 HGDHIWGGRPGSPEEDGD--RFIEIWNIVFMQYNRQASGEMLPLPKPSVDTGMGIERIAA 244
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
I+Q V +NYE D+ +I KA+E+ VS D T +L++I DH+R+ +L++DGV P
Sbjct: 245 IMQGVHSNYEIDIFRTLIAKAAEIIGVS-----DLTEKSLRVIADHIRSCAFLIADGVMP 299
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN GRGYV+RR+IRRAVR G LG L + + + + A L A
Sbjct: 300 SNEGRGYVLRRIIRRAVRHGNKLGATEAFFYKLVPSLIAVMGDAAKGL---------AET 350
Query: 396 QRILEE-LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGF 454
Q I+E+ LK EE +F +TLERG +LD L + T L G+ F LYDT+GF
Sbjct: 351 QAIVEKALKAEEEQFARTLERGLGILDAALNELKGDT--------LDGETVFKLYDTYGF 402
Query: 455 PVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKI-PDTEFL 513
P+++T +V E + VD GF++ M QR ++QAA N D +A L KI +T F
Sbjct: 403 PMDLTADVCRERNIIVDEAGFEVAMAEQRSRAQAAGN---FGADYNAAL--KIDAETAFS 457
Query: 514 GYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTN 573
GY L+ +A V ++ NG+ V + G + V+L+ TPFYAESGGQ+GD G L V G
Sbjct: 458 GYTELAGQAKVTAIYQNGESVTAIKAGDEAVVVLDVTPFYAESGGQVGDKGQL-VASGVE 516
Query: 574 QQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQA 633
V D +K G H+G + G L VG+ VEA VD KLR R +++H+ THLL A
Sbjct: 517 -----FTVNDTQK-YGQATGHQGVLATGNLSVGQVVEAKVDKKLRHRTQLNHSVTHLLHA 570
Query: 634 ALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMA 693
AL++V+G SQ GSLV +RLRFDF+ + EL+E+E L+N I + L+T M
Sbjct: 571 ALRQVLGTHVSQKGSLVDPERLRFDFSHFEGVKAAELKEVEELVNTQIRRNHELKTAEMG 630
Query: 694 LDDAKRAGAIAMFGEKYGEQVKI 716
+D+AK GA+A+FGEKY QV++
Sbjct: 631 IDEAKEKGAMALFGEKYDSQVRV 653
>gi|345862877|ref|ZP_08815091.1| alanine--tRNA ligase [endosymbiont of Tevnia jerichonana (vent
Tica)]
gi|345126219|gb|EGW56085.1| alanine--tRNA ligase [endosymbiont of Tevnia jerichonana (vent
Tica)]
Length = 880
Score = 565 bits (1457), Expect = e-158, Method: Compositional matrix adjust.
Identities = 314/687 (45%), Positives = 446/687 (64%), Gaps = 46/687 (6%)
Query: 45 DFPSSGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQV 103
+ SS D IRK FLD++A GH+V+ S+ LVP DPT+L T AGM+QFK FLG+ R
Sbjct: 3 NMKSSAD-IRKAFLDYFARNGHEVVASSPLVPLNDPTLLFTNAGMVQFKDAFLGRDKRSY 61
Query: 104 PRAATSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEF 159
RAA+SQRC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK+EAI +AWEF T
Sbjct: 62 LRAASSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKREAINYAWEFLTRTL 121
Query: 160 GLPANRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG--------ADDNFWNSGATGPCG 211
GLPA +LW++VYE+DDEA ++W KE+GV R+G DNFW+ G TGPCG
Sbjct: 122 GLPAEKLWVTVYEEDDEAADVWLKEIGVSEARFTRIGDKPGGKRHESDNFWSMGDTGPCG 181
Query: 212 PCSEIYYDFHPD--RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLG 269
PCSEI+YD P+ G D R+IE +NLVFMQYN+ +G++ PL + ++DTG+G
Sbjct: 182 PCSEIFYDHGPEVAGGPPGTPEEDGDRYIEIWNLVFMQYNRDAEGNMTPLPKPSVDTGMG 241
Query: 270 LERIARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLL 329
LER+A ++Q V +NYE DL +IK ASE+ S Q +L++I DH+R+ +L+
Sbjct: 242 LERLAAVMQGVHSNYEIDLFANLIKAASEVTGCSNLQEK-----SLRVIADHIRSCAFLV 296
Query: 330 SDGVFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDS 389
DGV PSN GRG+V+RR+IRRA+R G +LG KG L G + EL +
Sbjct: 297 VDGVIPSNEGRGFVLRRIIRRAIRHGYMLGQKGAFFYRLVGPLCDEMGASYPELLS---- 352
Query: 390 DVKAREQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLY 449
+A +R+L K+EE RF +TLE+G ++L++++A E +P G F LY
Sbjct: 353 -ARALVERVL---KQEEERFAETLEQGMRILEEVIAGL-----EGKQIP---GATVFKLY 400
Query: 450 DTFGFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPD 509
DT+GFPV++T ++A E +++DM+GF EME QR +++AA + V+ + + +
Sbjct: 401 DTYGFPVDLTADIARERDLTLDMEGFQREMEAQRERARAAS---QFGVNQEVSVGLE-GE 456
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
TEF+GY+ L A A V +L +G+ + +++G V+L+RTPFYAESGGQ GD G +
Sbjct: 457 TEFVGYECLEANATVVALYRDGESLDSLAEGETGLVVLDRTPFYAESGGQAGDKGVISAK 516
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
G + EV+D +K G VF H G + EG L VG V A V+ RQ ++H+ATH
Sbjct: 517 GGV-----LFEVEDTRKQGGDVFGHIGKLEEGSLAVGDPVTAEVNAFTRQATALNHSATH 571
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
LL AAL++V+G +Q GSLV +RLRFDF+ P+ +L+ +E+ +N I ++++T
Sbjct: 572 LLHAALREVLGDHVAQKGSLVDDERLRFDFSQFEPVSREQLQRVEQRVNEQIRQNHMVET 631
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKI 716
++M+L+DA+ +GA+A+FGEKY EQV++
Sbjct: 632 RIMSLEDARSSGAMALFGEKYDEQVRV 658
>gi|378581074|ref|ZP_09829724.1| alanyl-tRNA synthetase [Pantoea stewartii subsp. stewartii DC283]
gi|377816153|gb|EHT99258.1| alanyl-tRNA synthetase [Pantoea stewartii subsp. stewartii DC283]
Length = 875
Score = 565 bits (1457), Expect = e-158, Method: Compositional matrix adjust.
Identities = 310/681 (45%), Positives = 422/681 (61%), Gaps = 50/681 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG+ R RA TSQR
Sbjct: 8 IRQAFLDFFNSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGQDKRDYTRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFKKEAI +AWE T + F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKKEAIAYAWELLTGDQWFRLPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEAF+IW ++GVP E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYETDDEAFDIWANDIGVPRERIIRIGDNKGSAYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++ PL + ++DTG+GLERI
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMLPLPKPSVDTGMGLERITA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NYE DL +I +E+ + D +N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYEIDLFQKLINAVAEVTGAT-----DLSNKSLRVIADHIRSCAFLIADGVIP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K AF + IE+ +++ ++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAKE--------AFFYKLVAPLIEVMGAAGEELQRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ LK EE +F +TLERG LLD LA T L G+ F LYDTFGFP
Sbjct: 354 AQVENVLKSEEEQFAKTLERGLALLDDELAKLKGDT--------LDGETVFRLYDTFGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGY 515
++T +V E + +D GF+ ME QR Q A A D S ++ + F GY
Sbjct: 406 ADLTADVCRERNLKIDEAGFEKAMEQQR---QRAREASGFGADYS-NVIRTDAASSFKGY 461
Query: 516 DTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
D L A V+ L V G+ V VS G D V+L+ TPFY ESGGQ+GD G L +G N +
Sbjct: 462 DQLDLAATVKGLFVAGEAVDTVSAGQDAVVVLDETPFYGESGGQVGDTGVL---KGNNVE 518
Query: 576 TAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAAL 635
+V+D +K G H G + G L +G VEA+VD R R +++H+ATHL+ AAL
Sbjct: 519 ---FQVQDTQK-YGQAIGHIGKVSSGQLRIGDRVEAVVDEARRARIRLNHSATHLMHAAL 574
Query: 636 KKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALD 695
++V+G+ +Q GSLV LRFDF+ + E+ ++E ++N I ++T VM L+
Sbjct: 575 RQVLGEHVAQKGSLVNDKYLRFDFSHFEAMKPQEIRQVEDIVNAQIRRNLPVETDVMDLE 634
Query: 696 DAKRAGAIAMFGEKYGEQVKI 716
AK GA+A+FGEKY ++V++
Sbjct: 635 AAKAKGAMALFGEKYDQRVRV 655
>gi|374993666|ref|YP_004969165.1| alanine--tRNA ligase [Desulfosporosinus orientis DSM 765]
gi|357212032|gb|AET66650.1| alanine--tRNA ligase [Desulfosporosinus orientis DSM 765]
Length = 875
Score = 565 bits (1457), Expect = e-158, Method: Compositional matrix adjust.
Identities = 304/675 (45%), Positives = 434/675 (64%), Gaps = 31/675 (4%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
SG+ +R FL ++ ++GHK+LPSASL+P +DPT+LLT+AGM+ FKP F +V PRA
Sbjct: 3 SGNELRDMFLKYFEAKGHKILPSASLIPKDDPTLLLTVAGMVPFKPYFQRRVEPPFPRAT 62
Query: 108 TSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
T+Q+C+RT D+E VG+T+RHHT+FEMLGNFSFGDYFK +AI WAWE+ T +P +LW
Sbjct: 63 TAQKCVRTPDLEEVGKTARHHTYFEMLGNFSFGDYFKTDAIPWAWEYVTKVLKIPVKKLW 122
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCS 227
+++Y +D+EA IW K GV E I +G +NFW +G TGPCGPCSEIY D RGCS
Sbjct: 123 VTIYPEDEEAKTIWEK-AGVRSERI--VGDPENFWAAGPTGPCGPCSEIYVDLGEARGCS 179
Query: 228 D--VDLGDDT-RFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNY 284
+G D RF+E +NLVFMQ+N+ + G L PL ++NIDTG+GLERIA ++Q V N+
Sbjct: 180 KPGCAIGCDCDRFLEIWNLVFMQFNRDEAGVLTPLPKQNIDTGMGLERIASVMQGVETNF 239
Query: 285 ETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVV 344
+TDL PII + LA V+Y + N +++L LK++ DH+RA+ ++LSDG+ P+N GRGYV+
Sbjct: 240 DTDLFRPIIDHVANLAGVNY-KDNAKSDLALKVVSDHVRAVSFMLSDGIRPNNEGRGYVL 298
Query: 345 RRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKR 404
RR++RRA+R +LLGI + LE AF I ++ H ++K E I+ +
Sbjct: 299 RRILRRAIRYAKLLGID---KPFLESAF--RIIQRDY---AHSYPELKENENFIISHINL 350
Query: 405 EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAE 464
EE F TL++G +LL + + + + + L+G DAF LY+T+GFPVE+T E+
Sbjct: 351 EEKNFQATLDQGTQLLQEKVKELIKKGETV-----LAGADAFYLYETYGFPVELTDEMLA 405
Query: 465 EHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPD---TEFLGYDTLSAK 521
E G+SVDM+ F E R +++ ++ + +S +L EK T F+GY+ +SA
Sbjct: 406 EQGLSVDMEAFQKAAEEHRLRAKEQSQQMRAAA-ESPELTEKAKSLGVTPFIGYEKVSAT 464
Query: 522 AIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEV 581
+E++ VNG+ V +G +V + L+ TPFYAESGGQ+ D G + + A V
Sbjct: 465 PRIEAIFVNGQEVSDAGEGEEVVIFLSETPFYAESGGQVSDVGVIKTPR------AEARV 518
Query: 582 KDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQ 641
+VKK + F H+ +R GVL VG VE +D R HH+ATHLLQ AL+ V+G+
Sbjct: 519 LEVKKGVTGTFYHRAEVRGGVLHVGESVEVQIDNAERLATTRHHSATHLLQTALRSVLGE 578
Query: 642 ETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAG 701
QAGSLV +RLRFDF L EL+ +E LIN + ++ M+L +AK +G
Sbjct: 579 HVQQAGSLVTPERLRFDFTHFSQLTPAELKAVEGLINEAVLKNMPVKATEMSLTEAKESG 638
Query: 702 AIAMFGEKYGEQVKI 716
A A+FGEKYG+ V++
Sbjct: 639 ATALFGEKYGDIVRV 653
>gi|126175316|ref|YP_001051465.1| alanyl-tRNA synthetase [Shewanella baltica OS155]
gi|386342069|ref|YP_006038435.1| alanyl-tRNA synthetase [Shewanella baltica OS117]
gi|205830201|sp|A3D783.1|SYA_SHEB5 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|125998521|gb|ABN62596.1| alanyl-tRNA synthetase [Shewanella baltica OS155]
gi|334864470|gb|AEH14941.1| alanyl-tRNA synthetase [Shewanella baltica OS117]
Length = 874
Score = 565 bits (1457), Expect = e-158, Method: Compositional matrix adjust.
Identities = 318/683 (46%), Positives = 429/683 (62%), Gaps = 56/683 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
+R FL+F+ S GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 8 LRSAFLEFFRSNGHQVVDSSSLVPGNDPTLLFTNAGMNQFKDVFLGMDKRNYTRATTAQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
C+R ND++NVG T+RHHTFFEMLGNFSFGDYFK+EAI++ W F T LP RL
Sbjct: 68 CVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKEEAIRFGWTFLTETLKLPKERLC 127
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYYDF 220
+++Y+ DDEAFEIWNK++GV E+I R+G A DNFW G TGPCGPCSEI+YD
Sbjct: 128 VTIYQTDDEAFEIWNKKIGVAAENIIRIGDNKGAAYASDNFWQMGDTGPCGPCSEIFYD- 186
Query: 221 HPD-----RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
H D R S + GD RFIE +N+VFMQYN++ G + PL + ++DTG+G+ERIA
Sbjct: 187 HGDHIWGGRPGSPEEDGD--RFIEIWNIVFMQYNRQASGEMLPLPKPSVDTGMGIERIAA 244
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
I+Q V +NYE D+ +I KA+E+ VS D T +L++I DH+R+ +L++DGV P
Sbjct: 245 IMQGVHSNYEIDIFRTLIAKAAEIIGVS-----DLTEKSLRVIADHIRSCAFLIADGVMP 299
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN GRGYV+RR+IRRAVR G LG L + + + + A L A
Sbjct: 300 SNEGRGYVLRRIIRRAVRHGNKLGATEAFFYKLVPSLIAVMGDAAKGL---------AET 350
Query: 396 QRILEE-LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGF 454
Q I+E+ LK EE +F +TLERG +LD L + T L G+ F LYDT+GF
Sbjct: 351 QAIVEKALKAEEEQFARTLERGLGILDTALNELKGTT--------LDGETVFKLYDTYGF 402
Query: 455 PVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKI-PDTEFL 513
P+++T +V E + VD GF++ M QR ++QAA N D +A L KI +T F
Sbjct: 403 PMDLTADVCRERNIIVDEAGFEVAMAEQRSRAQAAGN---FGADYNAAL--KIDAETAFS 457
Query: 514 GYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTN 573
GY L+ +A + ++ NG+ V + G + V+L+ TPFYAESGGQ+GD G L V G
Sbjct: 458 GYTELAGQAKITAIYQNGESVTAIKAGDEAVVVLDVTPFYAESGGQVGDKGQL-VASGVE 516
Query: 574 QQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQA 633
V D +K G H+G + G L VG+ VEA VD KLR R +++H+ THLL A
Sbjct: 517 -----FTVNDTQK-YGQATGHQGVLATGNLSVGQVVEAKVDKKLRHRTQLNHSVTHLLHA 570
Query: 634 ALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMA 693
AL++V+G SQ GSLV +RLRFDF+ + EL+E+E L+N I + L+T M
Sbjct: 571 ALRQVLGTHVSQKGSLVDPERLRFDFSHFEGVKAAELKEVEELVNTQIRRNHELKTAEMG 630
Query: 694 LDDAKRAGAIAMFGEKYGEQVKI 716
+D+AK GA+A+FGEKY QV++
Sbjct: 631 IDEAKEKGAMALFGEKYDSQVRV 653
>gi|254230499|ref|ZP_04923872.1| alanyl-tRNA synthetase [Vibrio sp. Ex25]
gi|262393294|ref|YP_003285148.1| alanyl-tRNA synthetase [Vibrio sp. Ex25]
gi|451972074|ref|ZP_21925286.1| alanyl-tRNA synthetase [Vibrio alginolyticus E0666]
gi|151936971|gb|EDN55856.1| alanyl-tRNA synthetase [Vibrio sp. Ex25]
gi|262336888|gb|ACY50683.1| alanyl-tRNA synthetase [Vibrio sp. Ex25]
gi|451931912|gb|EMD79594.1| alanyl-tRNA synthetase [Vibrio alginolyticus E0666]
Length = 860
Score = 565 bits (1456), Expect = e-158, Method: Compositional matrix adjust.
Identities = 317/687 (46%), Positives = 432/687 (62%), Gaps = 51/687 (7%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S D +R FL F+ S+GH+++ S+SLVP DPT+L T AGM QFK FLG R RA
Sbjct: 4 STDEVRNAFLKFFESKGHQIVESSSLVPHNDPTLLFTNAGMNQFKDCFLGLEKRAYTRAT 63
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
T+QRC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI +AWEF T LPA
Sbjct: 64 TAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAISFAWEFLTEVLKLPA 123
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG--------ADDNFWNSGATGPCGPCSE 215
+RL ++VYE DDEAF+IWNK+VGVP + I R+G DNFW G TGPCGPC+E
Sbjct: 124 DRLLVTVYETDDEAFDIWNKKVGVPADRIVRIGDKEGGKPYESDNFWQMGDTGPCGPCTE 183
Query: 216 IYYDF--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERI 273
I+YD H G D RFIE +N VFMQ+N+ DG++EPL + ++DTG+G+ERI
Sbjct: 184 IFYDHGEHIWGGRPGTPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPSVDTGMGIERI 243
Query: 274 ARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGV 333
+ I+Q V +NYE D+ +IK A+E+ + Y D +N +L++I DH+R+ +L+ DGV
Sbjct: 244 SAIMQGVHSNYEIDVFQTLIKAAAEV--IGY---EDLSNQSLRVIADHIRSCSFLIVDGV 298
Query: 334 FPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKA 393
PSN GRGYV+RR+IRRAVR G LG +GAF + E+ ++K
Sbjct: 299 MPSNEGRGYVLRRIIRRAVRHGNKLGA--------QGAFFYKLVGVLAEVMGTAGEELK- 349
Query: 394 REQRILEELKR-EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTF 452
R+Q ++E++ R EE F +TLERG +L++ L D L G V L G+ F LYDT+
Sbjct: 350 RQQAVVEKVLRIEEENFGRTLERGMVILNEAL-DNL-----DGKV--LDGETVFKLYDTY 401
Query: 453 GFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKI-PDTE 511
GFP ++T +VA E ++D +GF+ ME QR Q A A + D +A A K+ TE
Sbjct: 402 GFPADLTNDVAREREFAIDEEGFEKAMEEQR---QRAREAGQFGTDYNA--AIKVDTQTE 456
Query: 512 FLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQG 571
F GY + V ++ V G V +S G ++L TPFYAESGGQ GD G + G
Sbjct: 457 FCGYTGTKGSSSVAAMFVEGNEVDSLSAGDKAIIVLGETPFYAESGGQCGDAGEIRTESG 516
Query: 572 TNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLL 631
V V+D +K LG+ H G + EGVL G EV IVD + R ++H+ATHLL
Sbjct: 517 ------VFRVEDTQK-LGNAIAHHGVMAEGVLAKGDEVATIVDAERRAAISLNHSATHLL 569
Query: 632 QAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKV 691
AAL++V+G+ +Q GSLV D LRFDF+ + EL+E+ERL+N I + ++T V
Sbjct: 570 HAALRQVLGEHVTQKGSLVKADSLRFDFSHLEAVTAAELKEVERLVNAQIRRNHTIETNV 629
Query: 692 MALDDAKRAGAIAMFGEKYGEQVKISS 718
M ++ AK+ GA+A+FGEKY ++V++ S
Sbjct: 630 MDIESAKKKGAMALFGEKYDDEVRVLS 656
>gi|372275051|ref|ZP_09511087.1| alanyl-tRNA synthetase [Pantoea sp. SL1_M5]
Length = 875
Score = 565 bits (1456), Expect = e-158, Method: Compositional matrix adjust.
Identities = 307/681 (45%), Positives = 428/681 (62%), Gaps = 50/681 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG+ R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHEVVTSSSLVPNNDPTLLFTNAGMNQFKDVFLGQDKRDYTRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK+EAI +AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKREAIGFAWELLTSEQWFSLPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW+++YE DDEAF+IW E+GVP E I R+G A DNFW G TGPCGPCSEI+Y
Sbjct: 128 LWVTIYETDDEAFDIWANEIGVPRERIIRIGDNKGSAYASDNFWQMGDTGPCGPCSEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++ PL + ++DTG+GLERI+
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMLPLPKPSVDTGMGLERISA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NYE DL +I+ +++ + D +N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYEIDLFQKLIQAVAQVTGAT-----DLSNKSLRVIADHIRSCAFLIADGVIP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K AF + IE+ +++ ++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAKE--------AFFYKLVAPLIEVMGAAGEELQRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ L T L G+ F LYDTFGFP
Sbjct: 354 AQVEQVLKSEEDQFARTLERGLALLDEELEKLQGDT--------LDGEIVFRLYDTFGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGY 515
++T +V E + +D GF+ ME QR Q A A D S ++ + F GY
Sbjct: 406 ADLTADVCRERNLKIDEAGFERAMEQQR---QRAREASGFGADYS-NVIRIDAASSFKGY 461
Query: 516 DTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
D L A V++L V G+ V +V+ G D V+L+ TPFY ESGGQ+GD G L +G N +
Sbjct: 462 DQLDLAATVKALYVAGEAVDEVTAGQDAVVVLDETPFYGESGGQVGDTGLL---KGKNAE 518
Query: 576 TAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAAL 635
+V + + +++G H G + G L +G +EA VD R R +++H+ATHLL AAL
Sbjct: 519 FSVQDTQKYGQAIG----HVGKLTAGQLRIGDRLEAQVDAARRARIRLNHSATHLLHAAL 574
Query: 636 KKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALD 695
++V+G+ +Q GSLV LRFDF+ + E+ ++E ++N I ++T+VM LD
Sbjct: 575 RQVLGEHVAQKGSLVNDKYLRFDFSHFEAMKPQEIRQVEDIVNAQIRRNLPVETEVMDLD 634
Query: 696 DAKRAGAIAMFGEKYGEQVKI 716
AK GA+A+FGEKY ++V++
Sbjct: 635 AAKSKGAMALFGEKYDQRVRV 655
>gi|319790646|ref|YP_004152279.1| alanyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
gi|317115148|gb|ADU97638.1| alanyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
Length = 878
Score = 565 bits (1456), Expect = e-158, Method: Compositional matrix adjust.
Identities = 310/672 (46%), Positives = 435/672 (64%), Gaps = 31/672 (4%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S D IR+ FL F+ +GH + S+ LVP+ DPT+L T AGM+QFK FLGK RA
Sbjct: 4 SADRIRETFLKFFEEKGHARVKSSPLVPKNDPTLLFTNAGMVQFKDYFLGKEEPPFKRAT 63
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
+ Q+C+R ND+ENVGRT RHHTFFEMLGNFSFGDYFK+EAI++AWE T F LP
Sbjct: 64 SCQKCMRAGGKHNDLENVGRTGRHHTFFEMLGNFSFGDYFKEEAIKFAWELVTEVFKLPK 123
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPD 223
RL++SVY++D+EAF IW VGVP E I R+G DNFW G TGPCGPCSEIYYD +
Sbjct: 124 ERLYVSVYKEDEEAFRIWRDVVGVPQERIYRLGEKDNFWAMGDTGPCGPCSEIYYDRGEE 183
Query: 224 RGCS-DVDLG--DDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKV 280
C + +G D R++E +NLVFMQ+ + + G L PL++ +IDTG+GLERIA +LQ V
Sbjct: 184 FACGPNCGIGSCDCDRYLEIWNLVFMQFERDESGKLRPLEKPSIDTGMGLERIASVLQGV 243
Query: 281 PNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGR 340
P+NYETDL+FP++K AS+L+ V Y +S ++++ ++++I DHLRA+ +L+SDGV P+N GR
Sbjct: 244 PSNYETDLLFPLVKWASKLSGVPYGRS-EKSDTSMRVIADHLRAMTFLISDGVLPANEGR 302
Query: 341 GYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILE 400
GYV+RR+IRRA R GRLLGIK G FL S ++ +++ +++ + +
Sbjct: 303 GYVLRRIIRRASRHGRLLGIK--------GPFLYSGVKEVVKIMGKAYPELELSRELVER 354
Query: 401 ELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITK 460
++REE RF +TLERG ++ +++ + SR+ + + G + F LYDTFGFP+++
Sbjct: 355 VVRREEERFSRTLERGLQIFQEIIDELKSRSEKV-----IPGSEVFKLYDTFGFPIDLVL 409
Query: 461 EVAEEHGVSVDMKGFDIEMENQRRQSQAAHN--AVKLSVDDSADLAEKIPDTEFLGYDTL 518
EVA + G+ VD++GF+ ++ QR +++ A A K+ + L+ + P T F GY+ L
Sbjct: 410 EVANDEGLRVDLEGFEKLLKEQRERARKAWKGGAQKVVSPELQRLSLEHP-TLFTGYEHL 468
Query: 519 SAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAV 578
A V +L + V +S+G + V+L+RTPFY E GGQ+GD G L +GT+ V
Sbjct: 469 EEYAKVVGILKGEELVESISEGEEATVILDRTPFYPEKGGQVGDTGTL---EGTDSLCKV 525
Query: 579 VEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKV 638
+ +++ + L HK + G L VG VEA VD + R+ HTATHLL ALK+V
Sbjct: 526 TDTQNITEKL---IGHKVKVLRGKLSVGDYVEARVDEERRRAITRAHTATHLLHKALKEV 582
Query: 639 IGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAK 698
+G QAGSLV DRLRFDF EL +E L+N WI + ++ + M D+A
Sbjct: 583 LGNHVKQAGSLVLPDRLRFDFTHFEAPTKEELRAVEELVNRWITENYPVKIEEMPYDEAL 642
Query: 699 RAGAIAMFGEKY 710
GAIA+FGEKY
Sbjct: 643 ERGAIALFGEKY 654
>gi|217972432|ref|YP_002357183.1| alanyl-tRNA synthetase [Shewanella baltica OS223]
gi|217497567|gb|ACK45760.1| alanyl-tRNA synthetase [Shewanella baltica OS223]
Length = 874
Score = 565 bits (1456), Expect = e-158, Method: Compositional matrix adjust.
Identities = 318/683 (46%), Positives = 429/683 (62%), Gaps = 56/683 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
+R FL+F+ S GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 8 LRSAFLEFFRSNGHQVVDSSSLVPGNDPTLLFTNAGMNQFKDVFLGMDKRNYTRATTAQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
C+R ND++NVG T+RHHTFFEMLGNFSFGDYFK+EAI++ W F T LP RL
Sbjct: 68 CVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKEEAIRFGWTFLTETLKLPKERLC 127
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYYDF 220
+++Y+ DDEAFEIWNK++GV E+I R+G A DNFW G TGPCGPCSEI+YD
Sbjct: 128 VTIYQTDDEAFEIWNKKIGVAAENIIRIGDNKGAAYASDNFWQMGDTGPCGPCSEIFYD- 186
Query: 221 HPD-----RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
H D R S + GD RFIE +N+VFMQYN++ G + PL + ++DTG+G+ERIA
Sbjct: 187 HGDHIWGGRPGSPEEDGD--RFIEIWNIVFMQYNRQASGEMLPLPKPSVDTGMGIERIAA 244
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
I+Q V +NYE D+ +I KA+E+ VS D T +L++I DH+R+ +L++DGV P
Sbjct: 245 IMQGVHSNYEIDIFRTLIAKAAEIIGVS-----DLTEKSLRVIADHIRSCAFLIADGVMP 299
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN GRGYV+RR+IRRAVR G LG L + + + + A L A
Sbjct: 300 SNEGRGYVLRRIIRRAVRHGNKLGATEAFFYKLVPSLIAVMGDAAKGL---------AET 350
Query: 396 QRILEE-LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGF 454
Q I+E+ LK EE +F +TLERG +LD L + T L G+ F LYDT+GF
Sbjct: 351 QAIVEKALKAEEEQFARTLERGLGILDAALNELKGDT--------LDGETVFKLYDTYGF 402
Query: 455 PVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKI-PDTEFL 513
P+++T +V E + VD GF++ M QR ++QAA N D +A L KI +T F
Sbjct: 403 PMDLTADVCRERNIIVDEAGFEVAMAEQRSRAQAAGN---FGADYNAAL--KIDAETAFS 457
Query: 514 GYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTN 573
GY L+ +A + ++ NG+ V + G + V+L+ TPFYAESGGQ+GD G L V G
Sbjct: 458 GYTELAGQAKITAIYQNGESVTAIKAGDEAVVVLDVTPFYAESGGQVGDKGQL-VANGVE 516
Query: 574 QQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQA 633
V D +K G H+G + G L VG+ VEA VD KLR R +++H+ THLL A
Sbjct: 517 -----FTVNDTQK-YGQATGHQGVLATGSLSVGQVVEAKVDKKLRHRTQLNHSVTHLLHA 570
Query: 634 ALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMA 693
AL++V+G SQ GSLV +RLRFDF+ + EL+E+E L+N I + L+T M
Sbjct: 571 ALRQVLGTHVSQKGSLVDPERLRFDFSHFEGVKAAELKEVEELVNTQIRRNHELKTAEMG 630
Query: 694 LDDAKRAGAIAMFGEKYGEQVKI 716
+D+AK GA+A+FGEKY QV++
Sbjct: 631 IDEAKEKGAMALFGEKYDSQVRV 653
>gi|268593120|ref|ZP_06127341.1| alanine--tRNA ligase [Providencia rettgeri DSM 1131]
gi|291311391|gb|EFE51844.1| alanine--tRNA ligase [Providencia rettgeri DSM 1131]
Length = 875
Score = 565 bits (1456), Expect = e-158, Method: Compositional matrix adjust.
Identities = 309/684 (45%), Positives = 431/684 (63%), Gaps = 52/684 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ ++GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 8 IRQAFLDFFHTKGHQVVSSSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRAYSRATTAQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AI++AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIRFAWELLTSEEWFNLPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VY DDEA++IWNKE+G+PVE I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYATDDEAYDIWNKEIGIPVERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +NLVFMQ+N++ DG++EPL + ++DTG+GLERI+
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNLVFMQFNRQSDGTMEPLPKPSVDTGMGLERISA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NYE D+ +I A+ + D N +L++I DH+R+ +L+SDGV P
Sbjct: 247 VLQHVNSNYEIDIFRDLIAAAA-----KATGATDLENKSLRVIADHIRSCAFLVSDGVIP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN GRGYV+RR+IRRAVR G +LG K L + + A EL AR+
Sbjct: 302 SNEGRGYVLRRIIRRAVRHGYMLGAKDTFFYKLVAPLIKVMGPAADEL---------ARQ 352
Query: 396 QRILEE-LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGF 454
Q ++E+ LK EE +F +TLERG +LLD+ LA T L G+ AF LYDT+GF
Sbjct: 353 QAMVEKVLKTEEEQFARTLERGLQLLDEELASLKGDT--------LDGEAAFRLYDTYGF 404
Query: 455 PVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLG 514
P+++T +V E + VD +GF+ ME+QRR+++ + D L + +EF G
Sbjct: 405 PIDLTADVCRERNIKVDEEGFERAMEDQRRRARESSGFGA----DYNSLIKVDKRSEFSG 460
Query: 515 YDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQ 574
Y +A + +L +G+PV ++ G + V+L++T FYAESGGQ+GD G+L N
Sbjct: 461 YQYDEQQATITALYKDGQPVDSLNAGEEGLVILDKTAFYAESGGQVGDTGYL------NN 514
Query: 575 QTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAA 634
A +V D +K G H G + G L V + A+VD R +++H+ATHLL AA
Sbjct: 515 DNASFKVTDTQK-YGQAIGHIGKVEAGSLVVNHRITAVVDSARRDAIRLNHSATHLLHAA 573
Query: 635 LKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMAL 694
L++V+G SQ GSLV LRFDF+ + +L ++E ++N I + ++T++M L
Sbjct: 574 LRQVLGDHVSQKGSLVNDKYLRFDFSHFEAMTQEQLRQVEDIVNAQIRKNSEIETELMDL 633
Query: 695 DDAKRAGAIAMFGEKYGEQVKISS 718
+ AK GA+A+FGEKY E+V++ S
Sbjct: 634 EGAKAKGAMALFGEKYEERVRVLS 657
>gi|303230862|ref|ZP_07317609.1| alanine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6]
gi|302514622|gb|EFL56617.1| alanine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6]
Length = 872
Score = 565 bits (1456), Expect = e-158, Method: Compositional matrix adjust.
Identities = 309/676 (45%), Positives = 428/676 (63%), Gaps = 40/676 (5%)
Query: 50 GDSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
G+ +R+ +L F+ S+GH L S SL+PE DP++LL AGM KP F GK+ R T
Sbjct: 3 GNELRQAYLQFFESKGHLKLDSFSLIPENDPSLLLIGAGMAPLKPFFTGKLVPPCHRITT 62
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
SQ+C+RT D+ENVGRT+RHHTFFEMLGNFSFGDYFKK+AI WAWEF T L NRL++
Sbjct: 63 SQKCMRTGDLENVGRTARHHTFFEMLGNFSFGDYFKKDAIHWAWEFLTEVIKLDKNRLYV 122
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
+VY DD EA++ W+ + GV HI R+ +DNFW G GPCGP SEI++D P+ GC D
Sbjct: 123 TVYPDDQEAYDTWHNDCGVEESHITRL--EDNFWEIG-EGPCGPDSEIFFDQGPEHGCDD 179
Query: 229 VDLG---DDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYE 285
+ D R++E +NLVF Q+NK DGS EPL+ KNIDTG GLER+A +LQ N+E
Sbjct: 180 PNCAPGCDCDRYLEIWNLVFTQFNKMPDGSYEPLQHKNIDTGAGLERLASVLQHCKTNFE 239
Query: 286 TDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVR 345
TDLIFPIIK ++ A V Y + + T+++LK+I DH RA+ L+SDGV PSN GRGYV+R
Sbjct: 240 TDLIFPIIKATAKRAGVKYNE-DPNTDVSLKVIADHARAVTALISDGVLPSNEGRGYVLR 298
Query: 346 RLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKRE 405
R++RRAVR GRLLGI EG FL + + +++ + ++ + ++ E
Sbjct: 299 RILRRAVRHGRLLGI--------EGLFLTPLIDVVVDILGPGIKSIAEKQDFVKRVVQNE 350
Query: 406 ELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEE 465
E RF QTLE+G +LL+ ++ D L+ + + VP G + F LYDT+GFP E+T+E+A E
Sbjct: 351 EERFNQTLEQGLELLNSLI-DTLAAEKAT-VVP---GTEVFKLYDTYGFPWELTEEIASE 405
Query: 466 HGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTL--SAKAI 523
G ++D +GFD M+ QR +++ A V + A +A PD FL + L +
Sbjct: 406 RGFTIDHEGFDAAMKEQRERAREAR------VKEDAKVA--TPDITFLKDEELVENEAET 457
Query: 524 VESLLVNGKPVIKVSK---GSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVE 580
S+L+ GK ++ G ++ V++ TPF+AE GGQ+GD GF+ + G VE
Sbjct: 458 ASSVLMLGKGSERLQTAVDGDEITVIVRTTPFHAEGGGQLGDTGFIVGSMGK------VE 511
Query: 581 VKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIG 640
V + K+ H GT+ EG + G +V VD R +HTATHLL AALK+V+G
Sbjct: 512 VHNTKRLPEGTVYHIGTVVEGSISEGDDVTLEVDTARRAAMARNHTATHLLHAALKRVLG 571
Query: 641 QETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRA 700
+ +QAGSLV D LRFDF P+ EL++IE L+N I A L M++D+AK
Sbjct: 572 EHVNQAGSLVTPDYLRFDFTHFSPVTQEELDQIEALVNEEILKATDLAIAEMSMDEAKAK 631
Query: 701 GAIAMFGEKYGEQVKI 716
GA+A+FG+KYG+ V++
Sbjct: 632 GAMALFGDKYGDVVRV 647
>gi|153001637|ref|YP_001367318.1| alanyl-tRNA synthetase [Shewanella baltica OS185]
gi|205830202|sp|A6WR16.1|SYA_SHEB8 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|151366255|gb|ABS09255.1| alanyl-tRNA synthetase [Shewanella baltica OS185]
Length = 874
Score = 565 bits (1456), Expect = e-158, Method: Compositional matrix adjust.
Identities = 317/683 (46%), Positives = 430/683 (62%), Gaps = 56/683 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
+R FL+F+ S GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 8 LRSAFLEFFRSNGHQVVDSSSLVPGNDPTLLFTNAGMNQFKDVFLGMDKRNYTRATTAQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
C+R ND++NVG T+RHHTFFEMLGNFSFGDYFK+EAI++ W F T LP RL
Sbjct: 68 CVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKEEAIRFGWTFLTETLKLPKERLC 127
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYYDF 220
+++Y+ DDEAFEIWNK++GV E+I R+G A DNFW G TGPCGPC+EI+YD
Sbjct: 128 VTIYQTDDEAFEIWNKKIGVAAENIIRIGDNKGAAYASDNFWQMGDTGPCGPCTEIFYD- 186
Query: 221 HPD-----RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
H D R S + GD RFIE +N+VFMQYN++ G + PL + ++DTG+G+ERIA
Sbjct: 187 HGDHIWGGRPGSPEEDGD--RFIEIWNIVFMQYNRQASGEMLPLPKPSVDTGMGIERIAA 244
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
I+Q V +NYE D+ +I KA+E+ VS D T +L++I DH+R+ +L++DGV P
Sbjct: 245 IMQGVHSNYEIDIFRTLIAKAAEIIGVS-----DLTEKSLRVIADHIRSCAFLIADGVMP 299
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN GRGYV+RR+IRRAVR G LG L + + + + A L A
Sbjct: 300 SNEGRGYVLRRIIRRAVRHGNKLGATEAFFYKLVPSLIAVMGDAAKGL---------AET 350
Query: 396 QRILEE-LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGF 454
Q I+E+ LK EE +F +TLERG +LD L + T L G+ F LYDT+GF
Sbjct: 351 QVIVEKALKAEEEQFARTLERGLGILDTALNELKGDT--------LDGETVFKLYDTYGF 402
Query: 455 PVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKI-PDTEFL 513
P+++T +V E + VD GF++ M QR ++QAA N D +A L KI +T F
Sbjct: 403 PMDLTADVCRERNIIVDEAGFEVAMAEQRSRAQAAGN---FGADYNAAL--KIDAETAFT 457
Query: 514 GYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTN 573
GY L+ +A V ++ +NG+ V + G + V+L+ TPFYAESGGQ+GD G L V G
Sbjct: 458 GYTELAGQAKVTAIYLNGESVTAIKAGDEAVVVLDVTPFYAESGGQVGDKGQL-VANGIE 516
Query: 574 QQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQA 633
V D +K G H+G + G L VG+ +EA VD KLR R +++H+ THLL A
Sbjct: 517 -----FTVNDTQK-YGQATGHQGVLATGSLSVGQVIEAKVDKKLRHRTQLNHSVTHLLHA 570
Query: 634 ALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMA 693
AL++V+G SQ GSLV +RLRFDF+ + EL+E+E L+N I + L+T M
Sbjct: 571 ALRQVLGTHVSQKGSLVDPERLRFDFSHFEGVKAAELKEVEELVNTQIRRNHELKTAEMG 630
Query: 694 LDDAKRAGAIAMFGEKYGEQVKI 716
+D+AK GA+A+FGEKY QV++
Sbjct: 631 IDEAKEKGAMALFGEKYDSQVRV 653
>gi|160902096|ref|YP_001567677.1| alanyl-tRNA synthetase [Petrotoga mobilis SJ95]
gi|205830174|sp|A9BJE0.1|SYA_PETMO RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|160359740|gb|ABX31354.1| alanyl-tRNA synthetase [Petrotoga mobilis SJ95]
Length = 876
Score = 565 bits (1456), Expect = e-158, Method: Compositional matrix adjust.
Identities = 299/675 (44%), Positives = 420/675 (62%), Gaps = 29/675 (4%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
+ + IR+ FL F+ +GHK LPS+SL+P DP +L T+AGM+ FKPIF GKV R T
Sbjct: 5 TSEEIRENFLYFFEKKGHKKLPSSSLIPNDPQLLFTVAGMVPFKPIFWGKVEPTYTRITT 64
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
Q+C+RTND+ENVGRT RHHTFFEMLGNFSFGDYFKKEAI+WAWEF T E GLPA +LW
Sbjct: 65 CQKCLRTNDIENVGRTPRHHTFFEMLGNFSFGDYFKKEAIKWAWEFLTEELGLPAEKLWA 124
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWN-SGATGPCGPCSEIYYDFHPDRGCS 227
SVYE DDEAF IW ++ +P I R G ++N+W +G TGPCGPCSEIY+D C
Sbjct: 125 SVYETDDEAFNIWKDDIKIPENKILRFGKEENWWGPAGQTGPCGPCSEIYFDTGYTENCP 184
Query: 228 DVD----LGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNN 283
D + D RF+E +N+VF +Y ++G+L PL +KNIDTG G ERI + Q +N
Sbjct: 185 DQENCTPACDCGRFVEIWNIVFTEYYSDENGNLSPLPRKNIDTGAGFERICAVTQGKYDN 244
Query: 284 YETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYV 343
+++DL II++ + V + + N ++++K+I DH RAI +L+S+G+ PSN GRGYV
Sbjct: 245 FDSDLFKEIIEEIQRIFGVKF-RVNKSKDVSIKVIADHSRAIAFLISEGIIPSNEGRGYV 303
Query: 344 VRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELK 403
+RRLIRRAVR G LL K G FL SI E I+ I ++ +E I +
Sbjct: 304 LRRLIRRAVRHGALLEAK--------GPFLSSILETVIKKMGKIYPELIEKEALIKDISF 355
Query: 404 REELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVA 463
EE +F +T+E+G ++++ + E+ L G+ AF LYDT+GFP+++TKE+
Sbjct: 356 MEEEKFFETMEKG---MERLNNIIQNLNNET----TLPGKIAFELYDTYGFPLDLTKEIL 408
Query: 464 EEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDS--ADLAEKIPDTEFLGYDTLSAK 521
E G+ VD K F M QR +++A V+ + ++ + + TEF+GYD LS+
Sbjct: 409 SEKGIEVDEKEFTELMNKQREMARSASGKVEYDTEKQIYKEIDKFLTPTEFIGYDKLSST 468
Query: 522 AIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEV 581
V+ ++ V + +G ++E+ +TPFYAE GGQ+ D G +Y +T EV
Sbjct: 469 EEVQLIIKGNSIVPQAQEGDEIELFFPKTPFYAERGGQVSDKGVIY------NETFEAEV 522
Query: 582 KDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQ 641
VK + H I++G ++ G V VD K R+ + +HTATHLL +AL+KVIG+
Sbjct: 523 IHVKPIRNEIISHLVKIKKGSIKNGERVFLKVDEKKRKATEKNHTATHLLHSALRKVIGE 582
Query: 642 ETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAG 701
QAGS VA +RLRFDF + PL ++++IE LIN I A + + +L++AK
Sbjct: 583 HIRQAGSYVAPERLRFDFTHYEPLTQDQIKQIEYLINEQIQKAIPVNIYLKSLEEAKSMD 642
Query: 702 AIAMFGEKYGEQVKI 716
IA+F EKYGE V+I
Sbjct: 643 VIALFEEKYGEVVRI 657
>gi|451981574|ref|ZP_21929926.1| Alanyl-tRNA synthetase [Nitrospina gracilis 3/211]
gi|451761247|emb|CCQ91190.1| Alanyl-tRNA synthetase [Nitrospina gracilis 3/211]
Length = 879
Score = 565 bits (1455), Expect = e-158, Method: Compositional matrix adjust.
Identities = 296/678 (43%), Positives = 434/678 (64%), Gaps = 30/678 (4%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
+G+ IR FL ++ RGH V+PS +LVP+ DP++L T AGM+QFK +FLG+ R RAA
Sbjct: 2 TGNEIRHLFLKYFEDRGHTVVPSDALVPKNDPSLLFTNAGMVQFKNVFLGQEKRDYTRAA 61
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
+SQ+C+R ND+E VGRT+RHHTFFEMLGNFSFGDYFKKEAI +AWEF T LP
Sbjct: 62 SSQKCVRAGGKHNDLEMVGRTARHHTFFEMLGNFSFGDYFKKEAIAYAWEFLTEIVKLPK 121
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPD 223
++L+IS+Y+DD++AF+IW ++G+ + I R+G +DNFW G TGPCGPCSEIY D
Sbjct: 122 DKLYISIYKDDEDAFQIWKNDIGLADDRIYRLGEEDNFWAMGNTGPCGPCSEIYIDQGEA 181
Query: 224 RGCSDVDLG---DDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKV 280
GC D R++E +NLVFMQY++ + G++EPL IDTG+GLER+A +LQ
Sbjct: 182 LGCGKPTCAVGCDCDRYLEIWNLVFMQYDRDEAGNMEPLPSPCIDTGMGLERLAAVLQGQ 241
Query: 281 PNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGR 340
P+NY++D++ +I+ A+++ Y S++ +++L++I DH RA +L++DGV PSN GR
Sbjct: 242 PSNYDSDIMMGLIQHAAKITGKPYNASHE-NDVSLRVIADHARAATFLINDGVLPSNEGR 300
Query: 341 GYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILE 400
GYV+RR++RRA+R G+LL + E F I E IE + +D+K + I +
Sbjct: 301 GYVLRRIMRRALRHGKLL--------DQEKPFFHHITEDVIEKFQDVYADLKTNREFIQK 352
Query: 401 ELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITK 460
+ EE+ F TL G + L+++L D L R ++P G++ F LYDTFGFPV++ +
Sbjct: 353 VVTNEEVSFNNTLTFGTERLNEIL-DRL-RQENKTTIP---GEEVFKLYDTFGFPVDLVE 407
Query: 461 EVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAV--KLSVDDSADLAEKIPDTEFLGYDTL 518
E A++ G +DM GFD M+ QR ++ A+ K + ++ T F GY
Sbjct: 408 ETAKDTGFELDMSGFDRAMKEQREKAMASWKGSGEKQIAPIYTKIVQEHGGTLFDGYGGT 467
Query: 519 SAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAV 578
+ V +LL + KPV +G ++E++L+ TPFY ESGGQ+GD G+ + +G
Sbjct: 468 EGEGRVLALLKDQKPVESAGEGDEIELVLDETPFYGESGGQVGDIGWAFHDRGR------ 521
Query: 579 VEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKV 638
+EV D +K L ++ VHK + +G + G + VD + R +H+ATHLL AALK+V
Sbjct: 522 LEVTDTQKPLNNLIVHKAKVTQGTVSKGDALNLQVDARKRIDTANNHSATHLLHAALKEV 581
Query: 639 IGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAK 698
+G QAGSLV DRLRFD+ PL + E E IE L+N I + ++TKV++++DA
Sbjct: 582 LGPHVKQAGSLVEADRLRFDYTHFSPLTEEERERIEALVNEQIRANHEVETKVVSMEDAL 641
Query: 699 RAGAIAMFGEKYGEQVKI 716
GA+A+FGEKY + V++
Sbjct: 642 EEGAVALFGEKYDDHVRV 659
>gi|260494135|ref|ZP_05814266.1| alanyl-tRNA synthetase [Fusobacterium sp. 3_1_33]
gi|260198281|gb|EEW95797.1| alanyl-tRNA synthetase [Fusobacterium sp. 3_1_33]
Length = 867
Score = 565 bits (1455), Expect = e-158, Method: Compositional matrix adjust.
Identities = 293/676 (43%), Positives = 434/676 (64%), Gaps = 39/676 (5%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
+G+ IR++F++F+ + HK SASL+P+DPT+LLT+AGM+ FKP FLG+ PR T
Sbjct: 3 TGNEIREKFIEFFMQKQHKHFESASLIPDDPTLLLTVAGMVPFKPYFLGQKEAPCPRVTT 62
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
Q+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFKKEAI+W+WEF T + ++LW+
Sbjct: 63 YQKCIRTNDLENVGRTARHHTFFEMLGNFSFGDYFKKEAIKWSWEFVTEVLKIDKDKLWV 122
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYD----FHPDR 224
+V+ DDEA +IW +E P E I RMG +N+W++G TG CGPCSEI+ D + D
Sbjct: 123 TVFTTDDEAEKIWTEECNFPKERIVRMGESENWWSAGPTGSCGPCSEIHVDLGVQYGGDE 182
Query: 225 GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNY 284
D G D RFIE +NLVF ++N+ +DGSLEPL +KNIDTG GLERIA ++Q NN+
Sbjct: 183 NSKIGDEGTDNRFIEIWNLVFTEWNRMEDGSLEPLPKKNIDTGAGLERIAAVVQGKTNNF 242
Query: 285 ETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVV 344
ETDL+FPI+++A+++ Y + N T+ +LK+I DH RA+ +L++DGV PSN GRGY++
Sbjct: 243 ETDLLFPILEEAAKITGSQYGK-NSETDFSLKVITDHARAVTFLINDGVIPSNEGRGYIL 301
Query: 345 RRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKR 404
RR++RRAVR GRLLG K F+ + +K +E D+K + I + +K
Sbjct: 302 RRILRRAVRHGRLLGYK--------DLFMYKMVDKVVEKFEVAYPDLKKNLENIRKIVKI 353
Query: 405 EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAE 464
EE +F TL++G +L++Q + + L+ + +L G+ +F LYDT+GFP E+T+E+AE
Sbjct: 354 EEEKFSNTLDQGMQLVNQEIDNLLTNGKN-----KLDGEISFKLYDTYGFPYELTEEIAE 408
Query: 465 EHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPD----TEFLGYDTLSA 520
E GV+V + F+ +ME Q+ ++++A V DS EK D T+F GY+
Sbjct: 409 ERGVTVLREEFEAKMEEQKEKARSAREVVMEKGQDS--FIEKFYDKYGVTKFTGYEKTED 466
Query: 521 KAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVE 580
+ + SL + +K ++ ++TPFYAESGGQ+GD G +Y + +
Sbjct: 467 EGKLLSL--------REAKDGKYLLIFDKTPFYAESGGQVGDQGKIY------SDNFIGK 512
Query: 581 VKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIG 640
V DV+K +F+H +G+ E + + VD R +HTATHLL AL++V+G
Sbjct: 513 VLDVQKQ-KDIFIHTVEFEKGIAEENKTYKLEVDIVRRLDTAKNHTATHLLHKALREVVG 571
Query: 641 QETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRA 700
QAGSLV ++LRFDF+ + L +L +IE ++N I + + ++++AK+
Sbjct: 572 THVQQAGSLVDPEKLRFDFSHYEALTTEQLSKIEDIVNEKIREGIEVNISHHSIEEAKKL 631
Query: 701 GAIAMFGEKYGEQVKI 716
GA+ +FG+KYG+ V++
Sbjct: 632 GAMMLFGDKYGDVVRV 647
>gi|313672790|ref|YP_004050901.1| alanyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM 19672]
gi|312939546|gb|ADR18738.1| alanyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM 19672]
Length = 873
Score = 565 bits (1455), Expect = e-158, Method: Compositional matrix adjust.
Identities = 307/679 (45%), Positives = 445/679 (65%), Gaps = 37/679 (5%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
SG IR++FL ++ GHK++ S+SLVP+ DPT+L T AGM QFK +FLG R+ RA
Sbjct: 3 SGKDIREKFLKYFEKHGHKIVDSSSLVPQNDPTLLFTNAGMNQFKDLFLGLEKREYTRAT 62
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
T Q+ +R ND+ENVGRT+RHHTFFEMLGNFSFGDYFKKEAI++AWEF T E GLP
Sbjct: 63 TCQKVVRAGGKHNDLENVGRTARHHTFFEMLGNFSFGDYFKKEAIEYAWEFLTKELGLPE 122
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPD 223
+L++S+Y DD+EAFEIWNK +G+P E I R G DNFW+ G TGPCGPCSEI+ D P+
Sbjct: 123 EKLFVSIYYDDEEAFEIWNKVIGIPAEKILRRGEKDNFWSMGDTGPCGPCSEIHIDQGPE 182
Query: 224 RGCSDVDLGDDT---RFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKV 280
GC D D R +E +NLVFMQY++ DG L PL + +IDTG+GLERI + Q
Sbjct: 183 AGCRKPDCNPDCDCDRHLELWNLVFMQYDRSADGKLTPLPKPSIDTGMGLERITAVCQGK 242
Query: 281 PNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGR 340
+NY+TDLI PII+ ++LA +Y +N++ +++L++I DH R+ +L++DGV PSN GR
Sbjct: 243 LSNYDTDLIKPIIEFTAKLAGKNYG-NNEKDDVSLRVIADHSRSTTFLIADGVIPSNEGR 301
Query: 341 GYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILE 400
GYV+RR++RRA+R G++LG +G F + E ++ ++K ++ I +
Sbjct: 302 GYVLRRIMRRAMRHGKMLG--------FDGTFFYKVCEFVVDFMGDHYIELKDKKDYISK 353
Query: 401 ELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITK 460
+ EE RF +TL+ G KL+D++L R +SG + F LYDT+GFP+++ +
Sbjct: 354 MVAFEEKRFSRTLDLGLKLIDELLEKNKDR-------KEISGSEIFKLYDTYGFPIDLLQ 406
Query: 461 EVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIP--DTEFLGYDTL 518
++AE++G +D+ GFD EM Q Q +A + V + A++ +K+ TEF GYD
Sbjct: 407 DIAEDNGYKLDLMGFDKEMALQ--QERAKKHWVGSGEEKIAEVYKKLSHLKTEFQGYDNH 464
Query: 519 SAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAV 578
S + + +L+ NG+ +V +G +V++LL +TPFY E GGQ GD G +Y + A+
Sbjct: 465 SLSSKILALIENGEEKQEVQEGKEVDILLEQTPFYPEGGGQQGDTGTIY------SREAI 518
Query: 579 VEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKV 638
EVKD KK G++ VHK +++G L+VG V A +D R + +HT+THLL AL+ V
Sbjct: 519 AEVKDTKK-YGNLIVHKAIVKKGTLKVGENVTAEIDSVKRIATERNHTSTHLLHKALQMV 577
Query: 639 IGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTK-VMALDDA 697
+G QAGSLV ++LRFDF+ + ++ EIER++N I NL TK +M +++A
Sbjct: 578 LGDHVRQAGSLVNDEKLRFDFSHFEAISKDDIIEIERIVNSIII-KNLSVTKTLMPIEEA 636
Query: 698 KRAGAIAMFGEKYGEQVKI 716
++GA+A+FGEKY V++
Sbjct: 637 VKSGAMALFGEKYDRIVRV 655
>gi|312898889|ref|ZP_07758277.1| alanyl-tRNA synthetase [Megasphaera micronuciformis F0359]
gi|310620051|gb|EFQ03623.1| alanyl-tRNA synthetase [Megasphaera micronuciformis F0359]
Length = 868
Score = 565 bits (1455), Expect = e-158, Method: Compositional matrix adjust.
Identities = 302/674 (44%), Positives = 430/674 (63%), Gaps = 37/674 (5%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
+G+ IRK +LDF+ S+ H L S SLVPE DP++LL AGM KP F GK+ R
Sbjct: 5 TGNEIRKAYLDFFESKKHLKLHSFSLVPENDPSLLLIGAGMAPLKPYFTGKLVPPSYRVT 64
Query: 108 TSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
TSQ+CIRT D++NVGRT+RHHTFFEMLGNFSFGDYFKKEAI WAWEF T L N+L+
Sbjct: 65 TSQKCIRTGDIDNVGRTARHHTFFEMLGNFSFGDYFKKEAITWAWEFLTEVLELDTNKLY 124
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCS 227
++VY +D+EA++IW+ VG+ E I ++ +DNFW G GPCGP SEI+YD P+RGC
Sbjct: 125 VTVYPEDEEAYDIWHNIVGLADERIFKL--EDNFWEIG-EGPCGPDSEIFYDLGPERGCG 181
Query: 228 D--VDLGDDT-RFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNY 284
++G D R++E +NLVF Q+NK DGS EPL++KNIDTG GLER+A ++Q+ +N+
Sbjct: 182 KPTCNVGCDCDRYLEIWNLVFTQFNKTKDGSYEPLEKKNIDTGAGLERLASVIQQKESNF 241
Query: 285 ETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVV 344
ETDL+FPI+++ ++ + Y +N + +K+IGDH+RA+ ++ DG+ PSN GRGYV+
Sbjct: 242 ETDLLFPIMQRVIDVCHGDY--NNKEQKIAVKVIGDHIRAVTMMIGDGILPSNEGRGYVL 299
Query: 345 RRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKR 404
RR++RRAVR GR+LGI E AFL + + I++ ++ R++ I +
Sbjct: 300 RRILRRAVRFGRVLGI--------EEAFLADLVDIVIDMYKEAYPELAERKELIKTVIAT 351
Query: 405 EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAE 464
EE +F TL +G +LL+ M+ DA L+G+ F LYDTFGFPVE+T+E+ +
Sbjct: 352 EEAQFSATLAQGLELLNAMIEDA-------DGTGVLAGEKVFKLYDTFGFPVELTEEIVQ 404
Query: 465 EHGVSVDMKGFDIEMENQRRQSQAAHNAV--KLSVDDSADLAEKIPDTEFLGYDTLSAKA 522
EHG+++D GFD M+ Q+ +++AA V K++ D+ L D L D + A
Sbjct: 405 EHGMTIDHDGFDKAMKAQQERARAARAKVSAKVATPDTTGL-----DQSALVKDENAVNA 459
Query: 523 IVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVK 582
V + ++G V + K + + ++L++TPF+AE GGQIGD G++ G EV
Sbjct: 460 RVVLIGIDGAAVERAEKDTAITIILDKTPFHAEGGGQIGDTGYITGPSGK------AEVT 513
Query: 583 DVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQE 642
D K + + EG L G EV+ VD +HTATHLLQAAL+KV+G
Sbjct: 514 DTKSLANGLTYMIAIVTEGSLSRGDEVDITVDKVRNLDIARNHTATHLLQAALRKVLGTH 573
Query: 643 TSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGA 702
+QAGSLV +RLRFDF P+ + EL E+E+ +N I L+ + M +DDA + GA
Sbjct: 574 VNQAGSLVTPERLRFDFTHFSPMTNEELAEVEKEVNRQIMKNVDLEIEEMPVDDAIKKGA 633
Query: 703 IAMFGEKYGEQVKI 716
+A+FGEKYG+ V++
Sbjct: 634 MALFGEKYGDIVRV 647
>gi|188534789|ref|YP_001908586.1| Alanyl-tRNA synthetase [Erwinia tasmaniensis Et1/99]
gi|188029831|emb|CAO97712.1| Alanyl-tRNA synthetase [Erwinia tasmaniensis Et1/99]
Length = 875
Score = 565 bits (1455), Expect = e-158, Method: Compositional matrix adjust.
Identities = 303/689 (43%), Positives = 429/689 (62%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG+ R RA +SQR
Sbjct: 8 IRQSFLDFFQSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGQDKRSYSRATSSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK+EAI +AWE T + FGLP +
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQEAIAFAWELLTSDQWFGLPKEK 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEAFEIW KE+GVP E I R+G A DNFW G TGPCGPCSEI++
Sbjct: 128 LWVTVYETDDEAFEIWEKEIGVPRERIIRIGDNKGSAYASDNFWQMGDTGPCGPCSEIFF 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++ PL + ++DTG+GLERI
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQSDGTMLPLPKPSVDTGMGLERITA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NYE DL +IK +++ + D +N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYEIDLFAQLIKSVAQVTG-----AEDLSNKSLRVIADHIRSCAFLIADGVIP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG EG F + I + D+K ++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGA--------EGTFFFKLVAPLIAVMGTAGEDLKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ L + T L G+ F LYDTFGFP
Sbjct: 354 SQVEQVLKTEEEQFAKTLERGLALLDEELENLQGDT--------LDGETVFRLYDTFGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAEKIPD 509
V++T +V E + +D GF+ ME QR++++ A +N V + +D +
Sbjct: 406 VDLTADVCRERNLKIDEAGFERAMEQQRQRARKASGFGADYNNV-IHIDQA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GY L A + ++ V+G+ +S G + ++L+ TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYQQLQLNAAITAIFVDGESADTISAGQEGVIVLDSTPFYAESGGQVGDTGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G + V + +++G H G + G L VG V A VD R+R +++H+ATH
Sbjct: 513 RGNSASFMVSDTHKYAQAIG----HSGKLAAGKLRVGDSVSAQVDEARRERIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
LL AAL++V+G +Q GSLV LRFDF+ + E+ ++E ++N + ++T
Sbjct: 569 LLHAALRQVLGHHVAQKGSLVNDKYLRFDFSHFEAMTAQEIRQVEEIVNAQVRRNLSIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M L+ AK GA+A+FGEKY + V++ S
Sbjct: 629 NIMELEAAKAHGAMALFGEKYDDHVRVLS 657
>gi|390437363|ref|ZP_10225901.1| alanyl-tRNA ligase [Pantoea agglomerans IG1]
Length = 875
Score = 565 bits (1455), Expect = e-158, Method: Compositional matrix adjust.
Identities = 306/681 (44%), Positives = 428/681 (62%), Gaps = 50/681 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG+ R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHEVVTSSSLVPNNDPTLLFTNAGMNQFKDVFLGQDKRDYTRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK+EAI +AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKREAIGFAWELLTSEQWFSLPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW+++YE DDEAF+IW E+GVP E I R+G A DNFW G TGPCGPCSEI+Y
Sbjct: 128 LWVTIYETDDEAFDIWANEIGVPRERIIRIGDNKGSAYASDNFWQMGDTGPCGPCSEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++ PL + ++DTG+GLERI+
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMLPLPKPSVDTGMGLERISA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NYE DL +I+ +++ + D +N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYEIDLFQKLIQAVAQVTGAT-----DLSNKSLRVIADHIRSCAFLIADGVIP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K AF + +E+ +++ ++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAKE--------AFFYKLVAPLVEVMGAAGEELQRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ L T L G+ F LYDTFGFP
Sbjct: 354 AQVEQVLKSEEDQFARTLERGLALLDEELEKLQGDT--------LDGEIVFRLYDTFGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGY 515
++T +V E + +D GF+ ME QR Q A A D S ++ + F GY
Sbjct: 406 ADLTADVCRERNLKIDEAGFERAMEQQR---QRAREASGFGADYS-NVIRIDAASSFKGY 461
Query: 516 DTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
D L A V++L V G+ V +V+ G D V+L+ TPFY ESGGQ+GD G L +G N +
Sbjct: 462 DQLDLAATVKALYVAGEAVDEVTAGQDAVVVLDETPFYGESGGQVGDTGLL---KGKNAE 518
Query: 576 TAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAAL 635
+V + + +++G H G + G L +G +EA VD R R +++H+ATHLL AAL
Sbjct: 519 FSVQDTQKYGQAIG----HVGKLTAGQLRIGDRLEAQVDAARRARIRLNHSATHLLHAAL 574
Query: 636 KKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALD 695
++V+G+ +Q GSLV LRFDF+ + E+ ++E ++N I ++T+VM LD
Sbjct: 575 RQVLGEHVAQKGSLVNDKYLRFDFSHFEAMKPQEIRQVEDIVNAQIRRNLPVETEVMDLD 634
Query: 696 DAKRAGAIAMFGEKYGEQVKI 716
AK GA+A+FGEKY ++V++
Sbjct: 635 AAKSKGAMALFGEKYDQRVRV 655
>gi|37680987|ref|NP_935596.1| alanyl-tRNA synthetase [Vibrio vulnificus YJ016]
gi|41018162|sp|Q7MHR6.1|SYA_VIBVY RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|37199737|dbj|BAC95567.1| alanyl-tRNA synthetase [Vibrio vulnificus YJ016]
Length = 860
Score = 564 bits (1454), Expect = e-158, Method: Compositional matrix adjust.
Identities = 309/692 (44%), Positives = 431/692 (62%), Gaps = 61/692 (8%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S D +R FL F+ S+GH+++ S+SLVP DPT+L T AGM QFK FLG R RA
Sbjct: 4 STDEVRNAFLKFFESKGHQIVDSSSLVPHNDPTLLFTNAGMNQFKDCFLGAEKRAYTRAT 63
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
T+QRC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI +AWEF T LP
Sbjct: 64 TAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIAFAWEFLTETLKLPK 123
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG--------ADDNFWNSGATGPCGPCSE 215
+RL ++VYE DDEAF+IWN++VGVP + I R+G DNFW G TGPCGPC+E
Sbjct: 124 DRLLVTVYETDDEAFDIWNQKVGVPADRIIRIGDKKGGKQYESDNFWTMGDTGPCGPCTE 183
Query: 216 IYYDF--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERI 273
I+YD H G D RFIE +N VFMQ+N+ DG++EPL + ++DTG+G+ERI
Sbjct: 184 IFYDHGEHIWGGRPGTPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPSVDTGMGIERI 243
Query: 274 ARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGV 333
+ I+Q V +NYE D+ +IK +E+ D +N +L++I DH+R+ +L++DGV
Sbjct: 244 SAIMQGVHSNYEIDVFQKLIKATAEIVGCE-----DLSNQSLRVIADHIRSCSFLIADGV 298
Query: 334 FPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKA 393
PSN GRGYV+RR+IRRAVR G LG +G L G + A EL
Sbjct: 299 MPSNEGRGYVLRRIIRRAVRHGNKLGAQGVFFHKLVGVLAEVMGSAADELK--------- 349
Query: 394 REQRILEELKR-EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTF 452
++Q ++E++ R EE F +TLERG +L++ L DAL L G+ F LYDT+
Sbjct: 350 KQQAVVEKVLRIEEENFGRTLERGMVILNEAL-DALEG-------KELDGETVFKLYDTY 401
Query: 453 GFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAEK 506
GFP ++T +VA E ++D GF+ ME QR++++ A +NA K+ VD
Sbjct: 402 GFPADLTNDVARERDFTIDEAGFEKAMEEQRQRAREAGQFGTDYNA-KIKVD-------- 452
Query: 507 IPDTEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFL 566
+EF GY + ++ V +L V G+ +S G V+L TPFYAESGGQ GD G L
Sbjct: 453 -AQSEFCGYTSTQERSDVVALFVEGEETATLSAGDKAIVILQETPFYAESGGQCGDSGVL 511
Query: 567 YVTQGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHT 626
G + +V+D +K LG+ H G + EGVL G +V AIVD + R ++H+
Sbjct: 512 KTESG------LFQVEDTQK-LGNAIAHHGVLVEGVLAKGDQVTAIVDAERRAAISLNHS 564
Query: 627 ATHLLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANL 686
ATHLL AAL++V+G+ +Q GSLV + LRFDF+ + EL+E+ERL+N I +
Sbjct: 565 ATHLLHAALRQVLGEHVAQKGSLVKAENLRFDFSHLEAVTAAELKEVERLVNAQIRRNHT 624
Query: 687 LQTKVMALDDAKRAGAIAMFGEKYGEQVKISS 718
++T +M ++ AK+ GA+A+FGEKY ++V++ S
Sbjct: 625 IETNIMDIESAKQKGAMALFGEKYDDEVRVLS 656
>gi|150021161|ref|YP_001306515.1| alanyl-tRNA synthetase [Thermosipho melanesiensis BI429]
gi|205830274|sp|A6LMH9.1|SYA_THEM4 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|149793682|gb|ABR31130.1| alanyl-tRNA synthetase [Thermosipho melanesiensis BI429]
Length = 859
Score = 564 bits (1454), Expect = e-158, Method: Compositional matrix adjust.
Identities = 304/671 (45%), Positives = 450/671 (67%), Gaps = 35/671 (5%)
Query: 51 DSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQ 110
+ IR+ FL+F+ +GHK+LPSASL+P+DP ++ T+AGM+ FKPIF GKV PR T Q
Sbjct: 4 EEIRQLFLEFFEKKGHKILPSASLIPDDPQLMFTVAGMVPFKPIFWGKVDPVYPRVTTCQ 63
Query: 111 RCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWISV 170
+CIRT D+ENVGRT RHHTFFEMLGNFSFGDYFK+EAI+WAWEF T +P RLWISV
Sbjct: 64 KCIRTTDIENVGRTPRHHTFFEMLGNFSFGDYFKREAIEWAWEFVTQVLKIPEERLWISV 123
Query: 171 YEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWN-SGATGPCGPCSEIYYDFHPDRGCSD- 228
YE+D+EA++IW K +GV I ++G +DNFW +G TGPCGP +EI+YD + +D
Sbjct: 124 YEEDEEAYDIWRK-IGVSSNKIVKLGKEDNFWGPAGPTGPCGPDTEIFYDTGKEVPITDG 182
Query: 229 --VDLGD-DTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYE 285
+ G+ + RF+E +NLVF +Y + ++G L PLK+KNIDTG GLERIA ++Q V N++
Sbjct: 183 KEPNPGNTEGRFVEIWNLVFTEYYQDENGQLLPLKRKNIDTGAGLERIAAMMQGVYYNFD 242
Query: 286 TDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVR 345
TDL PII + +++ NV Y + +++ ++++++I DH+RA+V+L+SDGVFPSN GRGY++R
Sbjct: 243 TDLFLPIINRITDVLNVEYGR-DEKHDVSIRVIADHIRALVFLISDGVFPSNEGRGYILR 301
Query: 346 RLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKRE 405
R++RRA R G++LG E FL +I + +E I ++ ++ + E + E
Sbjct: 302 RILRRAARHGKMLG--------SEKPFLHNIVDAVVEKMGKIYPEIVEKQSFVKEIIYGE 353
Query: 406 ELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEE 465
E RF+Q L +G ++D+++ +E+G ++ G+ AF LYDT+GFP++I +++A E
Sbjct: 354 EERFLQNLNKGLDIVDKIV-------KETGG--KIDGEAAFKLYDTYGFPLDILRDLANE 404
Query: 466 HGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTLSAKAIVE 525
+G +D +GF+ ME QR++++ A V+ S + D T+F+GYD LS A V
Sbjct: 405 NGYILDEEGFNKYMEQQRKKAREAAGEVEFS--ERTDYETLDISTKFVGYDVLSTNARV- 461
Query: 526 SLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVK 585
L + + + K + E++L+ TPFY E GGQ+ D G V +G N + V +V
Sbjct: 462 -LKIRTEKFVDEVKDVECELILDETPFYPEKGGQVADKG---VIKGKNGEFVVT---NVY 514
Query: 586 KSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQ 645
+ + VHKG ++ G + VG + A VD K R+ +HTATHLL AAL+KV+G Q
Sbjct: 515 VPVEGIIVHKGKLK-GKIRVGDAIFASVDEKKRKATARNHTATHLLHAALRKVLGTHVRQ 573
Query: 646 AGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAM 705
AGSLVA +RLRFDF + L E+E+IE+++N I +A + TKVM+ D+A + GA+A+
Sbjct: 574 AGSLVAPERLRFDFTHYAALTKEEIEKIEKMVNEKILEAIDVNTKVMSYDEAIKNGAMAL 633
Query: 706 FGEKYGEQVKI 716
F EKYG++V++
Sbjct: 634 FEEKYGDKVRV 644
>gi|336401151|ref|ZP_08581923.1| alanyl-tRNA synthetase [Fusobacterium sp. 21_1A]
gi|336161508|gb|EGN64509.1| alanyl-tRNA synthetase [Fusobacterium sp. 21_1A]
Length = 867
Score = 564 bits (1454), Expect = e-158, Method: Compositional matrix adjust.
Identities = 293/676 (43%), Positives = 434/676 (64%), Gaps = 39/676 (5%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
+G+ IR++F++F+ + HK SASL+P+DPT+LLT+AGM+ FKP FLG+ PR T
Sbjct: 3 TGNEIREKFIEFFMQKQHKHFESASLIPDDPTLLLTVAGMVPFKPYFLGQKEAPCPRVTT 62
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
Q+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFKKEAI+W+WEF T + ++LW+
Sbjct: 63 YQKCIRTNDLENVGRTARHHTFFEMLGNFSFGDYFKKEAIKWSWEFVTEVLKIDKDKLWV 122
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYD----FHPDR 224
+V+ DDEA +IW +E P E I RMG +N+W++G TG CGPCSEI+ D + D
Sbjct: 123 TVFTTDDEAEKIWTEECNFPKERIVRMGESENWWSAGPTGSCGPCSEIHVDLGVQYGGDE 182
Query: 225 GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNY 284
D G D RFIE +NLVF ++N+ +DGSLEPL +KNIDTG GLERIA ++Q NN+
Sbjct: 183 NSKIGDEGTDNRFIEIWNLVFTEWNRMEDGSLEPLPKKNIDTGAGLERIAAVVQGKTNNF 242
Query: 285 ETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVV 344
ETDL+FPI+++A+++ Y + N T+ +LK+I DH RA+ +L++DGV PSN GRGY++
Sbjct: 243 ETDLLFPILEEAAKITGSQYGK-NSETDFSLKVITDHARAVTFLINDGVIPSNEGRGYIL 301
Query: 345 RRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKR 404
RR++RRAVR GRLLG K F+ + +K +E D+K + I + +K
Sbjct: 302 RRILRRAVRHGRLLGYK--------DLFMYKMVDKVVEKFEVAYPDLKKNLENIRKIVKI 353
Query: 405 EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAE 464
EE +F TL++G +L++Q + + L+ + +L G+ +F LYDT+GFP E+T+E+AE
Sbjct: 354 EEEKFSNTLDQGMQLVNQEIDNLLANGKN-----KLDGEISFKLYDTYGFPYELTEEIAE 408
Query: 465 EHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPD----TEFLGYDTLSA 520
E GV+V + F+ +ME Q+ ++++A V DS EK D T+F GY+
Sbjct: 409 ERGVTVLREEFEAKMEEQKEKARSAREVVMEKGQDS--FIEKFYDKYGVTKFTGYEKTED 466
Query: 521 KAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVE 580
+ + SL + +K ++ ++TPFYAESGGQ+GD G +Y + +
Sbjct: 467 EGKLLSL--------REAKDEKYLLIFDKTPFYAESGGQVGDQGKIY------SDDFIGK 512
Query: 581 VKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIG 640
V DV+K +F+H +G+ E + + VD R +HTATHLL AL++V+G
Sbjct: 513 VLDVQKQ-KDIFIHTVEFEKGIAEENKTYKLEVDIVRRLDTAKNHTATHLLHKALREVVG 571
Query: 641 QETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRA 700
QAGSLV ++LRFDF+ + L +L +IE ++N I + + ++++AK+
Sbjct: 572 THVQQAGSLVDPEKLRFDFSHYEALTTEQLSKIEDIVNEKIREGVEVNISHHSIEEAKKL 631
Query: 701 GAIAMFGEKYGEQVKI 716
GA+ +FG+KYG+ V++
Sbjct: 632 GAMMLFGDKYGDVVRV 647
>gi|433658625|ref|YP_007276004.1| Alanyl-tRNA synthetase [Vibrio parahaemolyticus BB22OP]
gi|432509313|gb|AGB10830.1| Alanyl-tRNA synthetase [Vibrio parahaemolyticus BB22OP]
Length = 860
Score = 564 bits (1454), Expect = e-158, Method: Compositional matrix adjust.
Identities = 316/687 (45%), Positives = 430/687 (62%), Gaps = 51/687 (7%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S D +R FL F+ S+GH+++ S+SLVP DPT+L T AGM QFK FLG R RA
Sbjct: 4 STDEVRNAFLKFFESKGHQIVESSSLVPHNDPTLLFTNAGMNQFKDCFLGLEKRAYTRAT 63
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
T+QRC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI +AWEF T LPA
Sbjct: 64 TAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAISFAWEFLTDVLKLPA 123
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG--------ADDNFWNSGATGPCGPCSE 215
+RL ++VYE DDEAF+IWNK+VGVP + I R+G DNFW G TGPCGPC+E
Sbjct: 124 DRLLVTVYETDDEAFDIWNKKVGVPADRIIRIGDKKGGKPYESDNFWQMGDTGPCGPCTE 183
Query: 216 IYYDF--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERI 273
I+YD H G D RFIE +N VFMQ+N+ DG++EPL + ++DTG+G+ERI
Sbjct: 184 IFYDHGEHIWGGRPGTPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPSVDTGMGIERI 243
Query: 274 ARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGV 333
+ I+Q V +NYE D+ +IK A+E+ + Y D +N +L++I DH+R+ +L+ DGV
Sbjct: 244 SAIMQGVHSNYEIDVFQALIKAAAEV--IGY---EDLSNQSLRVIADHIRSCSFLIVDGV 298
Query: 334 FPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKA 393
PSN GRGYV+RR+IRRAVR G LG +G L G + EL
Sbjct: 299 MPSNEGRGYVLRRIIRRAVRHGNKLGAQGAFFHKLVGVLADIMGTAGEELK--------- 349
Query: 394 REQRILEELKR-EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTF 452
R+Q ++E++ R EE F +TLERG +L++ L D L G V L G+ F LYDT+
Sbjct: 350 RQQAVVEKVLRIEEENFGRTLERGMAILNEAL-DNL-----DGKV--LDGETVFKLYDTY 401
Query: 453 GFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKI-PDTE 511
GFP ++T +VA E ++D +GF+ ME QR Q A A + D +A A K+ TE
Sbjct: 402 GFPADLTNDVAREREFAIDEEGFEKAMEEQR---QRAREAGQFGTDYNA--AIKVDTQTE 456
Query: 512 FLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQG 571
F GY + V ++ V G V +S G ++L TPFYAESGGQ GD G + G
Sbjct: 457 FCGYVGTKGSSSVAAMFVEGNEVDSISAGDKAIIVLGETPFYAESGGQCGDAGEIRTEAG 516
Query: 572 TNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLL 631
V V+D +K LG+ H G + EGVL G EV IVD + R ++H+ATHLL
Sbjct: 517 ------VFRVEDTQK-LGNAIAHHGVMAEGVLAKGDEVATIVDAERRAAISLNHSATHLL 569
Query: 632 QAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKV 691
AAL++V+G+ +Q GSLV + LRFDF+ + EL+E+ERL+N I ++++T V
Sbjct: 570 HAALRQVLGEHVTQKGSLVKAENLRFDFSHLEAVTAAELKEVERLVNAQIRRNHVIETNV 629
Query: 692 MALDDAKRAGAIAMFGEKYGEQVKISS 718
M ++ AK+ GA+A+FGEKY ++V++ S
Sbjct: 630 MDIESAKKKGAMALFGEKYDDEVRVLS 656
>gi|423136918|ref|ZP_17124561.1| alanyl-tRNA synthetase [Fusobacterium nucleatum subsp. animalis
F0419]
gi|371960985|gb|EHO78628.1| alanyl-tRNA synthetase [Fusobacterium nucleatum subsp. animalis
F0419]
Length = 870
Score = 564 bits (1453), Expect = e-158, Method: Compositional matrix adjust.
Identities = 292/676 (43%), Positives = 434/676 (64%), Gaps = 39/676 (5%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
+G+ IR++F++F+ + HK SASL+P+DPT+LLT+AGM+ FKP FLG+ PR T
Sbjct: 3 TGNEIREKFIEFFMQKQHKHFESASLIPDDPTLLLTVAGMVPFKPYFLGQKEAPCPRVTT 62
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
Q+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFKKEAI+W+WEF T + ++LW+
Sbjct: 63 YQKCIRTNDLENVGRTARHHTFFEMLGNFSFGDYFKKEAIKWSWEFVTEVLKIDKDKLWV 122
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYD----FHPDR 224
+V+ DDEA +IW +E P E I RMG +N+W++G TG CGPCSEI+ D + D
Sbjct: 123 TVFTTDDEAEKIWTEECNFPKERIVRMGESENWWSAGPTGSCGPCSEIHVDLGVQYGGDE 182
Query: 225 GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNY 284
D G D RFIE +NLVF ++N+ +DGSLEPL +KNIDTG GLERIA ++Q NN+
Sbjct: 183 NSKIGDEGTDNRFIEIWNLVFTEWNRMEDGSLEPLPKKNIDTGAGLERIAAVVQGKTNNF 242
Query: 285 ETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVV 344
ETDL+FPI+++A+++ Y + N T+ +LK+I DH RA+ +L++DGV PSN GRGY++
Sbjct: 243 ETDLLFPILEEAAKITGSQYGK-NSETDFSLKVITDHARAVTFLINDGVIPSNEGRGYIL 301
Query: 345 RRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKR 404
RR++RRAVR GRLLG K F+ + +K +E D+K + I + +K
Sbjct: 302 RRILRRAVRHGRLLGYK--------DLFMYKMVDKVVEKFEVAYPDLKKNLENIRKIVKI 353
Query: 405 EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAE 464
EE +F TL++G +L++Q + + L+ + +L G+ +F LYDT+GFP E+T+E+AE
Sbjct: 354 EEEKFSNTLDQGMQLVNQEIDNLLANGKN-----KLDGEISFKLYDTYGFPYELTEEIAE 408
Query: 465 EHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPD----TEFLGYDTLSA 520
E GV+V + F+ +ME Q+ ++++A V DS EK D T+F GY+
Sbjct: 409 ERGVTVLREEFEAKMEEQKEKARSAREVVMEKGQDS--FIEKFYDKYGVTKFTGYEKTED 466
Query: 521 KAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVE 580
+ + SL + +K ++ ++TPFYAESGGQ+GD G +Y + +
Sbjct: 467 EGKLLSL--------REAKDGKYLLIFDKTPFYAESGGQVGDQGKIY------SDDFIGK 512
Query: 581 VKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIG 640
V D++K +F+H +G+ E + + VD R +HTATHLL AL++V+G
Sbjct: 513 VLDIQKQ-KDIFIHTVEFEKGIAEENKTYKLEVDIVRRLDTAKNHTATHLLHKALREVVG 571
Query: 641 QETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRA 700
QAGSLV ++LRFDF+ + L +L +IE ++N I + + ++++AK+
Sbjct: 572 THVQQAGSLVDPEKLRFDFSHYEALTTEQLSKIEDIVNEKIREGMEVNISHHSIEEAKKL 631
Query: 701 GAIAMFGEKYGEQVKI 716
GA+ +FG+KYG+ V++
Sbjct: 632 GAMMLFGDKYGDVVRV 647
>gi|294783331|ref|ZP_06748655.1| alanine--tRNA ligase [Fusobacterium sp. 1_1_41FAA]
gi|294480209|gb|EFG27986.1| alanine--tRNA ligase [Fusobacterium sp. 1_1_41FAA]
Length = 867
Score = 564 bits (1453), Expect = e-158, Method: Compositional matrix adjust.
Identities = 295/674 (43%), Positives = 435/674 (64%), Gaps = 35/674 (5%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
+G+ IR++F++F+ + HK SASL+P+DPT+LLT+AGM+ FKP FLG+ PR T
Sbjct: 3 TGNEIREKFIEFFMQKQHKHFESASLIPDDPTLLLTVAGMVPFKPYFLGQKEAPYPRVTT 62
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
Q+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFK+EAI W+WEF T L ++LW+
Sbjct: 63 YQKCIRTNDLENVGRTARHHTFFEMLGNFSFGDYFKEEAIAWSWEFVTEVLKLNKDKLWV 122
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYD----FHPDR 224
+V+ DDEA IW ++ P E I RMG +N+W++G TG CGPCSEI+ D + D
Sbjct: 123 TVFTTDDEAERIWIEKCNFPKERIVRMGESENWWSAGPTGSCGPCSEIHVDLGVQYGGDE 182
Query: 225 GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNY 284
D G D RFIE +NLVF ++N+ +DGSLEPL +KNIDTG GLERIA ++Q PNN+
Sbjct: 183 NSKIGDEGTDNRFIEIWNLVFTEWNRMEDGSLEPLPKKNIDTGAGLERIAAVVQGKPNNF 242
Query: 285 ETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVV 344
ETDL+FPI+++A+ + Y +S++ TN +LK+I DH RA+ +L++DGV PSN GRGY++
Sbjct: 243 ETDLLFPILEEAARITGSQYGKSSE-TNFSLKVITDHARAVTFLVNDGVIPSNEGRGYIL 301
Query: 345 RRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKR 404
RR++RRAVR GRLLG K F+ + +K +E D+K + I + +K
Sbjct: 302 RRILRRAVRHGRLLGYK--------DLFMYKMVDKVVERFEVAYPDLKKNLENIRKIVKI 353
Query: 405 EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAE 464
EE +F TL++G +L++Q + + L+ + +L G+ +F LYDT+GFP E+T+E+AE
Sbjct: 354 EEEKFSNTLDQGIQLVNQEIDNLLANGKN-----KLDGEVSFKLYDTYGFPYELTEEIAE 408
Query: 465 EHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDS--ADLAEKIPDTEFLGYDTLSAKA 522
E GV+V + F+ +ME Q+ ++++A V DS D +K T+F GY+ K
Sbjct: 409 ERGVTVLREEFEAKMEEQKEKARSAREVVMEKGQDSFIEDFYDKHGVTKFTGYE----KT 464
Query: 523 IVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVK 582
E+ L++ + +K ++ ++TPFYAESGGQ+GD G +Y N V++V+
Sbjct: 465 EDEATLLSSRE----AKDGKYLLIFDKTPFYAESGGQVGDQGRIY---SDNFSAKVLDVQ 517
Query: 583 DVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQE 642
K +F+H I +G E + + V+ R +HTATHLL AL++V+G
Sbjct: 518 KQK----DIFIHTVEIEKGSAEENKTYKLEVNLLRRLDTAKNHTATHLLHKALREVVGTH 573
Query: 643 TSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGA 702
QAGSLV D+LRFDF+ + + +L +IE ++N I + + ++++AK GA
Sbjct: 574 VQQAGSLVDSDKLRFDFSHYEAVTAEQLAKIENIVNEKIREGIDVVVSHHSIEEAKNLGA 633
Query: 703 IAMFGEKYGEQVKI 716
+ +FG+KYGE V++
Sbjct: 634 MMLFGDKYGEVVRV 647
>gi|365873621|ref|ZP_09413154.1| alanine--tRNA ligase [Thermanaerovibrio velox DSM 12556]
gi|363983708|gb|EHM09915.1| alanine--tRNA ligase [Thermanaerovibrio velox DSM 12556]
Length = 881
Score = 564 bits (1453), Expect = e-158, Method: Compositional matrix adjust.
Identities = 311/676 (46%), Positives = 423/676 (62%), Gaps = 28/676 (4%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLG-KVPRQVPRAA 107
S +R+ FL F+ +G PSASL+P+DPT+L TIAGM+ FKP FLG K+P R
Sbjct: 5 SAAELREMFLSFFEEKGCVRYPSASLIPDDPTLLFTIAGMVPFKPYFLGLKLPSHT-RVT 63
Query: 108 TSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
T+Q+CIRTND++NVGRT+RHHTFFEMLGNFSFGDYFK E I WAWEF T G+ +R++
Sbjct: 64 TAQKCIRTNDIDNVGRTARHHTFFEMLGNFSFGDYFKAEIIPWAWEFLTQRVGMEPDRMY 123
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCS 227
+++Y DDDEA IW VG+P + I RMG +DNFW +G GPCGPCSEI YD P+ C
Sbjct: 124 VTIYRDDDEAESIWMNSVGIPKDRIIRMGEEDNFWAAGPVGPCGPCSEIIYDQGPEFSCG 183
Query: 228 DVDLG---DDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNY 284
G D R++E +NLVFMQYN+ + G+L PL +KNIDTG+GLER+A ++Q+V ++
Sbjct: 184 KPTCGVGCDCDRYLEVWNLVFMQYNRDEAGNLTPLPKKNIDTGMGLERLASVVQRVKTDF 243
Query: 285 ETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVV 344
ETDL P+I KA L VSY S + +L +++I DH+RA +L++DGV PSN G GYV+
Sbjct: 244 ETDLFRPLIDKACSLGGVSYGAS-PKADLAVRVISDHVRAAAFLVADGVLPSNEGAGYVL 302
Query: 345 RRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKR 404
RRLIRRA+R GRL+GI +G F+ I +L +++ I + L
Sbjct: 303 RRLIRRAIRFGRLIGI--------DGPFIKEILPVVEQLMGDPYTELLEHRATIYQVLDL 354
Query: 405 EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAE 464
EE RF++TLE+G LL++ LSR + G GQ AF LYDT+GFP E+T E+
Sbjct: 355 EEGRFLRTLEQGSALLEE----ELSRLKAGGETV-FPGQTAFELYDTYGFPFELTAEICA 409
Query: 465 EHGVSVDMKGFDIEMENQRR--QSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTLSAKA 522
EHG+ VD F+ ME QR +S + H++ L +D+ T F+GY+T A++
Sbjct: 410 EHGMKVDSTAFEEAMERQREMARSGSKHSSAVLKRTVYSDVLAH-GKTVFVGYETEEAES 468
Query: 523 IVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVK 582
V +++ +GK V S G VEV L TPFY E GGQ+GD G + G Q V+
Sbjct: 469 SVVAIVADGKAVDHASAGESVEVFLKETPFYGEKGGQVGDRGVILWEGGEAQ------VE 522
Query: 583 DVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQE 642
DV+ + + HK + +G L+ G+ V+ VD K R + HHTATHLL AL +V+G
Sbjct: 523 DVQCPMDGLISHKVMVLKGSLQAGQSVKCQVDSKRRWHIRRHHTATHLLHEALSRVLGGH 582
Query: 643 TSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGA 702
Q+GSLV+ D LRFDFN P+ E+ ++E +IN + + T LD AK GA
Sbjct: 583 VRQSGSLVSEDMLRFDFNHFAPMSPEEIAKVEDVINQVVLMDLPVSTVETDLDSAKAMGA 642
Query: 703 IAMFGEKYGEQVKISS 718
A+F EKYG+ V++ S
Sbjct: 643 KALFDEKYGDTVRVVS 658
>gi|344943373|ref|ZP_08782660.1| alanyl-tRNA synthetase [Methylobacter tundripaludum SV96]
gi|344260660|gb|EGW20932.1| alanyl-tRNA synthetase [Methylobacter tundripaludum SV96]
Length = 870
Score = 564 bits (1453), Expect = e-158, Method: Compositional matrix adjust.
Identities = 314/674 (46%), Positives = 439/674 (65%), Gaps = 44/674 (6%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
+R FL+F+ RGH + PS+SL+P DPT+L T AGM+QFK +FLG+ R +AATSQR
Sbjct: 9 LRTAFLEFFRERGHAIQPSSSLIPGNDPTLLFTNAGMVQFKDVFLGRDHRDYNKAATSQR 68
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFKKEAI +AW+F T E +PA +LW
Sbjct: 69 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKKEAIHFAWDFLTKELEIPAEKLW 128
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPD---- 223
I+V+++D EA +IW +VGV R+GA DNFW+ G GPCGPC+EI+YD D
Sbjct: 129 ITVFDEDSEAEKIWLDDVGVSPVRFSRIGAKDNFWSMGDVGPCGPCTEIFYDHGADIAGG 188
Query: 224 -RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPN 282
G D D GD R+IE +NLVFMQY++ DGSL PL + ++DTG+GLERIA +LQ V +
Sbjct: 189 PPGSPDED-GD--RYIEIWNLVFMQYDRSADGSLTPLPKPSVDTGMGLERIAAVLQGVHS 245
Query: 283 NYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGY 342
NYE DL ++K A+ELA S D T +L++I DH+R+ +L++DGV PSN GRGY
Sbjct: 246 NYEIDLFQKLLKAAAELAGTS-----DLTQSSLRVIADHIRSCAFLIADGVMPSNEGRGY 300
Query: 343 VVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEEL 402
VVRR+IRRA+R G LGI+ + F +A A E+ ++KA ++++ L
Sbjct: 301 VVRRIIRRAIRHGYRLGIR-------DVFFYKLVAPLAEEMGEAF-PELKAAQEQVERVL 352
Query: 403 KREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEV 462
K+EE RF +TLE+G K+L+ +A + GSV + G F LYDT+GFPV++T +
Sbjct: 353 KKEEERFAETLEQGMKILEACVA------KMEGSV--IPGDTVFQLYDTYGFPVDLTADF 404
Query: 463 AEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTLSAKA 522
A E+ ++VD GF+ M QR ++++A + D D+ + TEF GYD L +
Sbjct: 405 ARENNLTVDHAGFETAMSAQRERARSASS---FGADYDQDI-KLDAQTEFTGYDHLDDQV 460
Query: 523 IVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVK 582
+ L G+PV + G + V+L++TPFYAESGGQIGD G + AV EV
Sbjct: 461 HIIGLYKKGQPVDSLEDGEEGVVILDKTPFYAESGGQIGDCGKI------EADGAVFEVT 514
Query: 583 DVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQE 642
D +K G++F+HKG + G L G+ +A V R +++H+ATHLL AAL++V+G
Sbjct: 515 DTQKQGGNLFLHKGKLLTGTLTNGQLCDARVSAADRTATELNHSATHLLHAALRQVLGDH 574
Query: 643 TSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGA 702
+Q GSLV +RLRFDF+ P+ +E+ +ER++N I N + +VMA DDA +AGA
Sbjct: 575 VAQKGSLVNPERLRFDFSHFEPVTASEISTVERIVNEQIRANNPVSAQVMAKDDAVKAGA 634
Query: 703 IAMFGEKYGEQVKI 716
+A+FGEKYG++V++
Sbjct: 635 MALFGEKYGDEVRV 648
>gi|392556041|ref|ZP_10303178.1| alanyl-tRNA ligase [Pseudoalteromonas undina NCIMB 2128]
Length = 863
Score = 564 bits (1453), Expect = e-158, Method: Compositional matrix adjust.
Identities = 304/672 (45%), Positives = 429/672 (63%), Gaps = 42/672 (6%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR++FLDF+AS+ H+V+PS+SL+P D T+L AGM+QFK +FLG R RA +SQR
Sbjct: 6 IRQQFLDFFASKQHQVVPSSSLIPGNDATLLFNNAGMVQFKDVFLGAESRPYTRATSSQR 65
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI++AWEF T LP +L
Sbjct: 66 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAIKFAWEFLTEVVKLPKEKLL 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDF--HPDRG 225
+++Y DD+EAF W ++G+P + I R+ DNFW+ G TGPCGPCSEI+YD H G
Sbjct: 126 VTIYHDDEEAFGYWANDIGLPEDRIIRIATSDNFWSMGDTGPCGPCSEIFYDHGEHIWGG 185
Query: 226 CSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYE 285
D RFIE +NLVFMQYN++ DG++EPL ++++DTG+GLERI+ ILQ V +NYE
Sbjct: 186 PPGTPEEDGDRFIEIWNLVFMQYNRQSDGTMEPLPKQSVDTGMGLERISAILQGVHSNYE 245
Query: 286 TDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVR 345
DL +I A+ + N + D + +L+++ DH+R+ +L+SDGV PSN GRGYV+R
Sbjct: 246 IDLFQGLIAAAASVTN-----AQDMDDKSLRVVADHIRSCAFLISDGVMPSNEGRGYVLR 300
Query: 346 RLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKR- 404
R+IRRAVR G LG KG L A + + + EL A++Q I+E++ R
Sbjct: 301 RIIRRAVRHGNKLGAKGAFFYKLVAALIEQMGQAYPEL---------AKQQEIIEKVLRI 351
Query: 405 EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAE 464
EE +F +TLERG +L++ L+D +G V + G F LYDT+GFP ++T +VA
Sbjct: 352 EEEQFGKTLERGLAILEESLSDL------TGDV--IPGDLVFKLYDTYGFPADLTADVAR 403
Query: 465 EHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTLSAKAIV 524
E +++D +GF+ M QR+ +Q A K D + L T+F GYD+ + V
Sbjct: 404 ERQMTIDHQGFEACMAVQRKTAQ---QAGKFGADYNEQLKSD-KHTDFKGYDSNHYRGTV 459
Query: 525 ESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDV 584
+ G+ V + G ++L+RTPFYAESGGQIGD G + V G T +
Sbjct: 460 IEIFAGGESVSLLEDGQQGIIVLDRTPFYAESGGQIGDSGTITVAGGEFNVTNTTK---- 515
Query: 585 KKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETS 644
LG+ F H GT+ +G + V +V+A +D R+ K +HTATH+L AL++++G+ S
Sbjct: 516 ---LGNAFAHHGTV-QGRIGVNDKVDATIDDARRESIKKNHTATHILHEALRQLLGEHVS 571
Query: 645 QAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIA 704
Q GSLV DRLRFDF+ + EL EIER++N I L T++MA+DDAK GA+A
Sbjct: 572 QKGSLVQPDRLRFDFSHFEAVTKQELREIERVVNDEIRRNFALNTELMAIDDAKAKGAMA 631
Query: 705 MFGEKYGEQVKI 716
+FGEKY ++V++
Sbjct: 632 LFGEKYDDEVRV 643
>gi|294792102|ref|ZP_06757250.1| alanine--tRNA ligase [Veillonella sp. 6_1_27]
gi|294457332|gb|EFG25694.1| alanine--tRNA ligase [Veillonella sp. 6_1_27]
Length = 871
Score = 564 bits (1453), Expect = e-158, Method: Compositional matrix adjust.
Identities = 309/676 (45%), Positives = 428/676 (63%), Gaps = 40/676 (5%)
Query: 50 GDSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
G+ +R+ +L F+ S+GH L S SL+PE DP++LL AGM KP F GK+ R T
Sbjct: 3 GNELRQAYLQFFESKGHLKLDSFSLIPENDPSLLLIGAGMAPLKPFFTGKLVPPCHRITT 62
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
SQ+C+RT D+ENVGRT+RHHTFFEMLGNFSFGDYFKKEAI WAWEF T L NRL++
Sbjct: 63 SQKCMRTGDLENVGRTARHHTFFEMLGNFSFGDYFKKEAIHWAWEFLTEVIKLDKNRLYV 122
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
+VY DD EA++ W+ + GV HI R+ +DNFW G GPCGP SEI++D P+ GC D
Sbjct: 123 TVYPDDQEAYDTWHNDCGVEESHITRL--EDNFWEIG-EGPCGPDSEIFFDQGPEHGCDD 179
Query: 229 VDLG---DDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYE 285
+ D R++E +NLVF Q+NK DGS EPL+ KNIDTG GLER+A +LQ N+E
Sbjct: 180 PNCAPGCDCDRYLEIWNLVFTQFNKMPDGSYEPLQHKNIDTGAGLERLASVLQGCKTNFE 239
Query: 286 TDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVR 345
TDLIFPII+ ++ A V Y + + T+++LK+I DH RA+ L+SDGV PSN GRGYV+R
Sbjct: 240 TDLIFPIIEATAKRAGVKYNE-DPNTDVSLKVIADHARAVTALISDGVLPSNEGRGYVLR 298
Query: 346 RLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKRE 405
R++RRAVR GRLLGI EG FL + + +++ + ++ + ++ E
Sbjct: 299 RILRRAVRHGRLLGI--------EGIFLTPLIDVVVDILGPGIKSIAEKQDFVKRVVQNE 350
Query: 406 ELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEE 465
E RF QTLE+G +LL+ ++ D L+ + + VP G + F LYDT+GFP E+T+E+A E
Sbjct: 351 EERFNQTLEQGLELLNSLI-DTLAAEKAT-VVP---GTEVFKLYDTYGFPWELTEEIASE 405
Query: 466 HGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTL--SAKAI 523
G ++D +GF+ M+ QR +++ A V ++A +A PD FL + L
Sbjct: 406 RGFTIDHEGFEAAMKEQRERAREAR------VKEAAKVA--TPDITFLKDEELVEDEAET 457
Query: 524 VESLLVNGKPVIKV---SKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVE 580
S+L+ GK ++ + G ++ V++ TPF+AE GGQ+GD GF+ G VE
Sbjct: 458 ASSVLMLGKGSERLQTAADGDEITVIVRTTPFHAEGGGQLGDTGFIVGPMGK------VE 511
Query: 581 VKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIG 640
V + K+ H GT+ EG + G +V VD R +HTATHLL AALKKV+G
Sbjct: 512 VHNTKRLPEGTVYHIGTVIEGSISEGDDVTLEVDTNRRAAMARNHTATHLLHAALKKVLG 571
Query: 641 QETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRA 700
+ +QAGSLV D LRFDF P+ EL++IE L+N I A L M++D+AK
Sbjct: 572 EHVNQAGSLVTPDYLRFDFTHFSPVTQEELDQIEALVNEEILKATDLAIAEMSMDEAKAK 631
Query: 701 GAIAMFGEKYGEQVKI 716
GA+A+FG+KYG+ V++
Sbjct: 632 GAMALFGDKYGDVVRV 647
>gi|84390150|ref|ZP_00991412.1| alanyl-tRNA synthetase [Vibrio splendidus 12B01]
gi|84376804|gb|EAP93679.1| alanyl-tRNA synthetase [Vibrio splendidus 12B01]
Length = 860
Score = 564 bits (1453), Expect = e-158, Method: Compositional matrix adjust.
Identities = 307/687 (44%), Positives = 431/687 (62%), Gaps = 51/687 (7%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S D +R FL F+ S+ H+++ S+SLVP DPT+L T AGM QFK FLG R RA
Sbjct: 4 STDEVRNAFLKFFESKEHQIVDSSSLVPHNDPTLLFTNAGMNQFKDCFLGAEKRAYSRAT 63
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
T+QRC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK+EAI +AWEF T GLP
Sbjct: 64 TAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEEAIGFAWEFLTETLGLPK 123
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG--------ADDNFWNSGATGPCGPCSE 215
+RL ++VYE DDEAF+IWNK+VG+P + I R+G DNFW G TGPCGPC+E
Sbjct: 124 DRLLVTVYETDDEAFDIWNKKVGIPADKIVRIGDKEGGKKFESDNFWTMGDTGPCGPCTE 183
Query: 216 IYYDF--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERI 273
I+YD H G D RFIE +N VFMQ+N+ DG++EPL + +DTG+G+ERI
Sbjct: 184 IFYDHGEHIWGGRPGTPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPAVDTGMGIERI 243
Query: 274 ARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGV 333
+ I+Q V +NYE D+ +IK +E+ +D +N +L++I DH+R+ +L++DGV
Sbjct: 244 SAIMQGVHSNYEIDVFQKLIKATAEVVG-----HDDLSNQSLRVIADHIRSCSFLIADGV 298
Query: 334 FPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKA 393
PSN GRGYV+RR+IRRAVR G +G +G L G + A EL
Sbjct: 299 MPSNEGRGYVLRRIIRRAVRHGNKIGAQGVFFHKLVGVLAEVMGSAAEELK--------- 349
Query: 394 REQRILEELKR-EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTF 452
++Q ++E++ R EE F +TLERG +L+ L DAL L G+ F LYDT+
Sbjct: 350 KQQELVEKVLRIEEENFGRTLERGMVILNDAL-DALEG-------KELDGETVFKLYDTY 401
Query: 453 GFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKI-PDTE 511
GFP ++T +VA E ++D +GF+ ME QR++ A A + D +A L K+ +TE
Sbjct: 402 GFPADLTNDVARERDFTIDEEGFEKAMEAQRKR---AREAGQFGTDYNATL--KVDTNTE 456
Query: 512 FLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQG 571
F GY + +L V+G+ V +S G ++L TPFYAESGGQ GD G L G
Sbjct: 457 FCGYTATEGAGEISALFVDGEEVPSLSAGDKAIIILEETPFYAESGGQCGDAGTLKTASG 516
Query: 572 TNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLL 631
+ +V+D +K LG+ F H G + EGV G +VEAIVD + R ++H+ATHLL
Sbjct: 517 ------LFKVQDTQK-LGNAFAHHGELVEGVFAQGDKVEAIVDAERRAAISLNHSATHLL 569
Query: 632 QAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKV 691
+AL++V+G+ +Q GSLV D LRFDF+ + +++E+ERL+N + ++++T +
Sbjct: 570 HSALREVLGEHVAQKGSLVKPDNLRFDFSNLEAVTPAQIKEVERLVNAQVRKNHVIETNI 629
Query: 692 MALDDAKRAGAIAMFGEKYGEQVKISS 718
M ++ AK GA+A+FGEKY ++V++ S
Sbjct: 630 MDIESAKEKGAMALFGEKYDDEVRVLS 656
>gi|260361824|ref|ZP_05774840.1| alanine--tRNA ligase [Vibrio parahaemolyticus K5030]
gi|308114481|gb|EFO52021.1| alanine--tRNA ligase [Vibrio parahaemolyticus K5030]
Length = 788
Score = 564 bits (1453), Expect = e-158, Method: Compositional matrix adjust.
Identities = 316/687 (45%), Positives = 430/687 (62%), Gaps = 51/687 (7%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S D +R FL F+ S+GH+++ S+SLVP DPT+L T AGM QFK FLG R RA
Sbjct: 4 STDEVRNAFLKFFESKGHQIVESSSLVPHNDPTLLFTNAGMNQFKDCFLGLEKRAYTRAT 63
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
T+QRC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI +AWEF T LPA
Sbjct: 64 TAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAISFAWEFLTDVLKLPA 123
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG--------ADDNFWNSGATGPCGPCSE 215
+RL ++VYE DDEAF+IWNK+VGVP + I R+G DNFW G TGPCGPC+E
Sbjct: 124 DRLLVTVYETDDEAFDIWNKKVGVPADRIIRIGDKKGGKPYESDNFWQMGDTGPCGPCTE 183
Query: 216 IYYDF--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERI 273
I+YD H G D RFIE +N VFMQ+N+ DG++EPL + ++DTG+G+ERI
Sbjct: 184 IFYDHGEHIWGGRPGTPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPSVDTGMGIERI 243
Query: 274 ARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGV 333
+ I+Q V +NYE D+ +IK A+E+ + Y D +N +L++I DH+R+ +L+ DGV
Sbjct: 244 SAIMQGVHSNYEIDVFQALIKAAAEV--IGY---EDLSNQSLRVIADHIRSCSFLIVDGV 298
Query: 334 FPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKA 393
PSN GRGYV+RR+IRRAVR G LG +G L G + EL
Sbjct: 299 MPSNEGRGYVLRRIIRRAVRHGNKLGAQGAFFHKLVGVLADIMGTAGEELK--------- 349
Query: 394 REQRILEELKR-EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTF 452
R+Q ++E++ R EE F +TLERG +L++ L D L G V L G+ F LYDT+
Sbjct: 350 RQQAVVEKVLRIEEENFGRTLERGMAILNEAL-DNL-----DGKV--LDGETVFKLYDTY 401
Query: 453 GFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKI-PDTE 511
GFP ++T +VA E ++D +GF+ ME QR Q A A + D +A A K+ TE
Sbjct: 402 GFPADLTNDVAREREFAIDEEGFEKAMEEQR---QRAREAGQFGTDYNA--AIKVDTQTE 456
Query: 512 FLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQG 571
F GY + V ++ V G V +S G ++L TPFYAESGGQ GD G + G
Sbjct: 457 FCGYVGTKGSSSVAAMFVEGNEVDSLSAGDKAIIVLGETPFYAESGGQCGDAGEIRTEAG 516
Query: 572 TNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLL 631
V V+D +K LG+ H G + EGVL G EV IVD + R ++H+ATHLL
Sbjct: 517 ------VFRVEDTQK-LGNAIAHHGVMAEGVLAKGDEVATIVDAERRAAISLNHSATHLL 569
Query: 632 QAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKV 691
AAL++V+G+ +Q GSLV + LRFDF+ + EL+E+ERL+N I ++++T V
Sbjct: 570 HAALRQVLGEHVTQKGSLVKAENLRFDFSHLEAVTAAELKEVERLVNAQIRRNHVIETNV 629
Query: 692 MALDDAKRAGAIAMFGEKYGEQVKISS 718
M ++ AK+ GA+A+FGEKY ++V++ S
Sbjct: 630 MDIESAKKKGAMALFGEKYDDEVRVLS 656
>gi|237744281|ref|ZP_04574762.1| alanyl-tRNA synthetase [Fusobacterium sp. 7_1]
gi|229431510|gb|EEO41722.1| alanyl-tRNA synthetase [Fusobacterium sp. 7_1]
Length = 867
Score = 564 bits (1453), Expect = e-158, Method: Compositional matrix adjust.
Identities = 293/676 (43%), Positives = 433/676 (64%), Gaps = 39/676 (5%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
+G+ IR++F++F+ + HK SASL+P+DPT+LLT+AGM+ FKP FLG+ PR T
Sbjct: 3 TGNEIREKFIEFFMQKQHKHFESASLIPDDPTLLLTVAGMVPFKPYFLGQKEAPCPRVTT 62
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
Q+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFKKEAI+W+WEF T + ++LW+
Sbjct: 63 YQKCIRTNDLENVGRTARHHTFFEMLGNFSFGDYFKKEAIKWSWEFVTEVLKIDKDKLWV 122
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYD----FHPDR 224
+V+ DDEA +IW +E P E I RMG +N+W++G TG CGPCSEI+ D + D
Sbjct: 123 TVFTTDDEAEKIWTEECNFPKERIVRMGESENWWSAGPTGSCGPCSEIHVDLGVQYGGDE 182
Query: 225 GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNY 284
D G D RFIE +NLVF ++N+ +DGSLEPL +KNIDTG GLERIA ++Q NN+
Sbjct: 183 NSKIGDEGTDNRFIEIWNLVFTEWNRMEDGSLEPLPKKNIDTGAGLERIAAVVQGKTNNF 242
Query: 285 ETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVV 344
ETDL+FPI+++A ++ Y + N T+ +LK+I DH RA+ +L++DGV PSN GRGY++
Sbjct: 243 ETDLLFPILEEAGKITGSQYGK-NSETDFSLKVITDHARAVTFLINDGVIPSNEGRGYIL 301
Query: 345 RRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKR 404
RR++RRAVR GRLLG K F+ + +K +E D+K + I + +K
Sbjct: 302 RRILRRAVRHGRLLGYK--------DLFMYKMVDKVVEKFEVAYPDLKKNLKNIRKIVKI 353
Query: 405 EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAE 464
EE +F TL++G +L++Q + + L+ + +L G+ +F LYDT+GFP E+T+E+AE
Sbjct: 354 EEEKFSNTLDQGMQLVNQEIDNLLANGKN-----KLDGEISFKLYDTYGFPYELTEEIAE 408
Query: 465 EHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPD----TEFLGYDTLSA 520
E GV+V + F+ +ME Q+ ++++A V DS EK D T+F GY+
Sbjct: 409 ERGVTVLREEFEAKMEEQKEKARSAREVVMEKGQDS--FIEKFYDKYGVTKFTGYEKTED 466
Query: 521 KAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVE 580
+ + SL + +K ++ ++TPFYAESGGQ+GD G +Y + +
Sbjct: 467 EGKLLSL--------REAKDGKYLLIFDKTPFYAESGGQVGDQGKIY------SDDFIGK 512
Query: 581 VKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIG 640
V DV+K +F+H +G+ E + + VD R +HTATHLL AL++V+G
Sbjct: 513 VLDVQKQ-KDIFIHTVEFEKGIAEENKTYKLKVDIVRRLDTAKNHTATHLLHKALREVVG 571
Query: 641 QETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRA 700
QAGSLV ++LRFDF+ + L +L +IE ++N I + + ++++AK+
Sbjct: 572 THVQQAGSLVDPEKLRFDFSHYEALTTEQLSKIEDIVNEKIREGIEVNISHHSIEEAKKL 631
Query: 701 GAIAMFGEKYGEQVKI 716
GA+ +FG+KYG+ V++
Sbjct: 632 GAMMLFGDKYGDVVRV 647
>gi|119472239|ref|ZP_01614418.1| alanyl-tRNA synthetase [Alteromonadales bacterium TW-7]
gi|119445057|gb|EAW26352.1| alanyl-tRNA synthetase [Alteromonadales bacterium TW-7]
Length = 866
Score = 564 bits (1453), Expect = e-158, Method: Compositional matrix adjust.
Identities = 305/672 (45%), Positives = 430/672 (63%), Gaps = 42/672 (6%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR++FLDF+AS+ H+V+PS+SL+P D T+L AGM+QFK +FLG R RA +SQR
Sbjct: 9 IRQQFLDFFASKQHQVVPSSSLIPGNDATLLFNNAGMVQFKDVFLGAESRPYTRATSSQR 68
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK+EAI++AWEF T LP +L
Sbjct: 69 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQEAIKFAWEFLTEVVKLPQEKLL 128
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDF--HPDRG 225
+++Y DD+EAFE W+K++G+ + I R+ DNFW+ G TGPCGPCSEI+YD H G
Sbjct: 129 VTIYHDDEEAFEYWSKDIGLSEDRIIRIATSDNFWSMGDTGPCGPCSEIFYDHGEHIWGG 188
Query: 226 CSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYE 285
D RFIE +NLVFMQYN+++DG++ PL ++++DTG+GLERI+ ILQ V +NYE
Sbjct: 189 PPGSPEEDGDRFIEIWNLVFMQYNRQNDGTMLPLPKQSVDTGMGLERISAILQGVHSNYE 248
Query: 286 TDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVR 345
DL +I A+ + N + D + +L+++ DH+R+ +L+SDGV PSN GRGYV+R
Sbjct: 249 IDLFQGLIAAAASVTN-----AQDMDDKSLRVVADHIRSCAFLISDGVMPSNEGRGYVLR 303
Query: 346 RLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKR- 404
R+IRRAVR G LG +G L A + + + EL A++Q I+E++ R
Sbjct: 304 RIIRRAVRHGNKLGAQGAFFFKLVAALIEQMGQAYPEL---------AKQQEIIEKVLRI 354
Query: 405 EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAE 464
EE +F +TLERG +L++ L+D G V + G F LYDT+GFP ++T +VA
Sbjct: 355 EEEQFGKTLERGLAILEESLSDL------KGDV--IPGDLVFKLYDTYGFPADLTADVAR 406
Query: 465 EHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTLSAKAIV 524
E +++D KGF+ M QR+ +Q A K D + L T+F GYD+ A V
Sbjct: 407 ERQMTIDHKGFEECMAVQRKTAQ---QAGKFGADYNEQLKSD-KHTDFKGYDSTHYSATV 462
Query: 525 ESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDV 584
+ G+ V + G + V+L+RTPFYAESGGQ GD G + V G T +
Sbjct: 463 VEVFAGGEAVQLLEDGQEGIVILDRTPFYAESGGQTGDTGTITVAGGEFNVTNTTK---- 518
Query: 585 KKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETS 644
LG+ F H GT+ +G + V +V+A +D R+ K +HTATH+L AL++++G+ S
Sbjct: 519 ---LGNAFAHHGTV-QGRIGVNDKVDATIDDARRENIKKNHTATHILHEALRQLLGEHVS 574
Query: 645 QAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIA 704
Q GSLV DRLRFDF+ + EL +IER++N I L T++MA+DDAK GA+A
Sbjct: 575 QKGSLVQADRLRFDFSHFEAVTKDELRDIERVVNDEIRRNFALNTELMAIDDAKAKGAMA 634
Query: 705 MFGEKYGEQVKI 716
+FGEKY ++V++
Sbjct: 635 LFGEKYDDEVRV 646
>gi|417541247|ref|ZP_12193028.1| Alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Wandsworth str. A4-580]
gi|353661146|gb|EHD00564.1| Alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Wandsworth str. A4-580]
Length = 900
Score = 564 bits (1453), Expect = e-158, Method: Compositional matrix adjust.
Identities = 315/704 (44%), Positives = 435/704 (61%), Gaps = 68/704 (9%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWFALPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +I+ +++ + D N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRTLIEAVAKVTGAT-----DLGNKSLRVIADHIRSCAFLVADGVLP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K F + IE+ ++K ++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAKE--------TFFYKLVGPLIEVMGSAGEELKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLQGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQS--------QAAHNAVKLSVDDSADLAEKI 507
V++T +V E + VD GF+ ME QRR++ + A A D +A +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGFGAERAREASGFGADYNA-MIRVD 464
Query: 508 PDTEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLY 567
+EF GYD L V +L V+GK V ++ G + V+L++TPFYAESGGQ+GD G L
Sbjct: 465 SASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGEL- 523
Query: 568 VTQGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTA 627
+G AV + + +++G H G + G L+VG V+A VD R R +++H+A
Sbjct: 524 --KGAGFTFAVDDTQKYGQAIG----HLGKLSAGALKVGDAVQADVDEARRARIRLNHSA 577
Query: 628 THLLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLL 687
THL+ AAL++V+G +Q GSLV+ LRFDF+ + + +E+ E+E L+N I +
Sbjct: 578 THLMHAALRQVLGTHVAQKGSLVSDKVLRFDFSHNEAMKPSEIREVEDLVNAQIRRNLPI 637
Query: 688 QTKVMALDDA-------------KRAGAIAMFGEKYGEQVKISS 718
+T +M LD A K GA+A+FGEKY E+V++ S
Sbjct: 638 ETNIMDLDAAKAKGAMAMALFGEKYDGAMALFGEKYDERVRVLS 681
>gi|28899322|ref|NP_798927.1| alanyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
gi|153839216|ref|ZP_01991883.1| alanyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
gi|260878987|ref|ZP_05891342.1| alanine--tRNA ligase [Vibrio parahaemolyticus AN-5034]
gi|260895460|ref|ZP_05903956.1| alanine--tRNA ligase [Vibrio parahaemolyticus Peru-466]
gi|260903524|ref|ZP_05911919.1| alanine--tRNA ligase [Vibrio parahaemolyticus AQ4037]
gi|417318955|ref|ZP_12105513.1| alanyl-tRNA synthetase [Vibrio parahaemolyticus 10329]
gi|31076994|sp|Q87LR3.1|SYA_VIBPA RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|28807546|dbj|BAC60811.1| alanyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
gi|149747281|gb|EDM58267.1| alanyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
gi|308088224|gb|EFO37919.1| alanine--tRNA ligase [Vibrio parahaemolyticus Peru-466]
gi|308090433|gb|EFO40128.1| alanine--tRNA ligase [Vibrio parahaemolyticus AN-5034]
gi|308108704|gb|EFO46244.1| alanine--tRNA ligase [Vibrio parahaemolyticus AQ4037]
gi|328474145|gb|EGF44950.1| alanyl-tRNA synthetase [Vibrio parahaemolyticus 10329]
Length = 860
Score = 563 bits (1452), Expect = e-158, Method: Compositional matrix adjust.
Identities = 316/687 (45%), Positives = 430/687 (62%), Gaps = 51/687 (7%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S D +R FL F+ S+GH+++ S+SLVP DPT+L T AGM QFK FLG R RA
Sbjct: 4 STDEVRNAFLKFFESKGHQIVESSSLVPHNDPTLLFTNAGMNQFKDCFLGLEKRAYTRAT 63
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
T+QRC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI +AWEF T LPA
Sbjct: 64 TAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAISFAWEFLTDVLKLPA 123
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG--------ADDNFWNSGATGPCGPCSE 215
+RL ++VYE DDEAF+IWNK+VGVP + I R+G DNFW G TGPCGPC+E
Sbjct: 124 DRLLVTVYETDDEAFDIWNKKVGVPADRIIRIGDKKGGKPYESDNFWQMGDTGPCGPCTE 183
Query: 216 IYYDF--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERI 273
I+YD H G D RFIE +N VFMQ+N+ DG++EPL + ++DTG+G+ERI
Sbjct: 184 IFYDHGEHIWGGRPGTPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPSVDTGMGIERI 243
Query: 274 ARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGV 333
+ I+Q V +NYE D+ +IK A+E+ + Y D +N +L++I DH+R+ +L+ DGV
Sbjct: 244 SAIMQGVHSNYEIDVFQALIKAAAEV--IGY---EDLSNQSLRVIADHIRSCSFLIVDGV 298
Query: 334 FPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKA 393
PSN GRGYV+RR+IRRAVR G LG +G L G + EL
Sbjct: 299 MPSNEGRGYVLRRIIRRAVRHGNKLGAQGAFFHKLVGVLADIMGTAGEELK--------- 349
Query: 394 REQRILEELKR-EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTF 452
R+Q ++E++ R EE F +TLERG +L++ L D L G V L G+ F LYDT+
Sbjct: 350 RQQAVVEKVLRIEEENFGRTLERGMAILNEAL-DNL-----DGKV--LDGETVFKLYDTY 401
Query: 453 GFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKI-PDTE 511
GFP ++T +VA E ++D +GF+ ME QR Q A A + D +A A K+ TE
Sbjct: 402 GFPADLTNDVAREREFAIDEEGFEKAMEEQR---QRAREAGQFGTDYNA--AIKVDTQTE 456
Query: 512 FLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQG 571
F GY + V ++ V G V +S G ++L TPFYAESGGQ GD G + G
Sbjct: 457 FCGYVGTKGSSSVAAMFVEGNEVDSLSAGDKAIIVLGETPFYAESGGQCGDAGEIRTEAG 516
Query: 572 TNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLL 631
V V+D +K LG+ H G + EGVL G EV IVD + R ++H+ATHLL
Sbjct: 517 ------VFRVEDTQK-LGNAIAHHGVMAEGVLAKGDEVATIVDAERRAAISLNHSATHLL 569
Query: 632 QAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKV 691
AAL++V+G+ +Q GSLV + LRFDF+ + EL+E+ERL+N I ++++T V
Sbjct: 570 HAALRQVLGEHVTQKGSLVKAENLRFDFSHLEAVTAAELKEVERLVNAQIRRNHVIETNV 629
Query: 692 MALDDAKRAGAIAMFGEKYGEQVKISS 718
M ++ AK+ GA+A+FGEKY ++V++ S
Sbjct: 630 MDIESAKKKGAMALFGEKYDDEVRVLS 656
>gi|261253947|ref|ZP_05946520.1| alanyl-tRNA synthetase [Vibrio orientalis CIP 102891 = ATCC 33934]
gi|417954911|ref|ZP_12597940.1| alanyl-tRNA synthetase [Vibrio orientalis CIP 102891 = ATCC 33934]
gi|260937338|gb|EEX93327.1| alanyl-tRNA synthetase [Vibrio orientalis CIP 102891 = ATCC 33934]
gi|342814482|gb|EGU49425.1| alanyl-tRNA synthetase [Vibrio orientalis CIP 102891 = ATCC 33934]
Length = 860
Score = 563 bits (1452), Expect = e-158, Method: Compositional matrix adjust.
Identities = 307/686 (44%), Positives = 428/686 (62%), Gaps = 49/686 (7%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S D +R FL F+ S+GH+++ S+SLVP DPT+L T AGM QFK FLG R RA
Sbjct: 4 STDEVRNAFLKFFESKGHQIVDSSSLVPHNDPTLLFTNAGMNQFKDCFLGAEKRAYTRAT 63
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
T+QRC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI +AWEF T LP
Sbjct: 64 TAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIAFAWEFLTETLQLPK 123
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG--------ADDNFWNSGATGPCGPCSE 215
+RL ++VYE DDEAF+IWN++VGVP + I R+G DNFW G TGPCGPC+E
Sbjct: 124 DRLLVTVYETDDEAFDIWNQKVGVPADRIVRIGDKEGGKQFESDNFWTMGDTGPCGPCTE 183
Query: 216 IYYDF--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERI 273
I+YD H G D RFIE +N VFMQ+N+ DG++EPL + +DTG+G+ERI
Sbjct: 184 IFYDHGEHIWGGRPGTPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPAVDTGMGIERI 243
Query: 274 ARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGV 333
+ I+Q V +NYE D+ +IK +E+ D +N +L++I DH+R+ +L++DGV
Sbjct: 244 SAIMQGVHSNYEIDVFQKLIKATAEVVG-----HEDLSNQSLRVIADHIRSCSFLIADGV 298
Query: 334 FPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKA 393
PSN GRGYV+RR+IRRAVR G LG +G L G + A EL
Sbjct: 299 MPSNEGRGYVLRRIIRRAVRHGNKLGAQGVFFHKLVGVLAEVMGSAADELK--------- 349
Query: 394 REQRILEELKR-EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTF 452
++Q ++E++ R EE F +TLERG +L++ L DAL L G+ F LYDT+
Sbjct: 350 KQQAVVEKVLRIEEENFGRTLERGMVILNEAL-DALEG-------KELDGETVFKLYDTY 401
Query: 453 GFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEF 512
GFP ++T +VA E ++D GF+ ME QR Q A A + D +A + + +TEF
Sbjct: 402 GFPADLTNDVARERDFTIDEAGFEKAMEEQR---QRAREAGQFGTDYNATIKTE-AETEF 457
Query: 513 LGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGT 572
GY + V + V G+ +S G ++L+ TPFYAESGGQ GD G L G
Sbjct: 458 CGYAGTQGNSNVAEIFVEGEAAESLSAGDKAIIILSETPFYAESGGQCGDAGVLKTESG- 516
Query: 573 NQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQ 632
+ +V+D +K LG+ H G + EGVL G EVEA+VD + R ++H+ATHLL
Sbjct: 517 -----LFKVEDTQK-LGNAIAHHGVLAEGVLAKGDEVEAVVDAERRAAISLNHSATHLLH 570
Query: 633 AALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVM 692
AAL++V+G+ +Q GSLV + LRFDF+ + EL+E+ERL+N + ++++T +M
Sbjct: 571 AALRQVLGEHVAQKGSLVKPENLRFDFSNLEAVTPAELKEVERLVNAQVRRNHVIETNIM 630
Query: 693 ALDDAKRAGAIAMFGEKYGEQVKISS 718
++ AK+ GA+A+FGEKY ++V++ S
Sbjct: 631 DIESAKQKGAMALFGEKYDDEVRVLS 656
>gi|359449510|ref|ZP_09239001.1| alanyl-tRNA synthetase [Pseudoalteromonas sp. BSi20480]
gi|358044672|dbj|GAA75250.1| alanyl-tRNA synthetase [Pseudoalteromonas sp. BSi20480]
Length = 866
Score = 563 bits (1452), Expect = e-158, Method: Compositional matrix adjust.
Identities = 305/672 (45%), Positives = 429/672 (63%), Gaps = 42/672 (6%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR++FLDF+AS+ H+V+PS+SL+P D T+L AGM+QFK +FLG R RA +SQR
Sbjct: 9 IRQQFLDFFASKQHQVVPSSSLIPGNDATLLFNNAGMVQFKDVFLGAESRPYTRATSSQR 68
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK+EAI++AWEF T LP +L
Sbjct: 69 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQEAIKFAWEFLTEVVKLPQEKLL 128
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDF--HPDRG 225
+++Y DD+EAFE W+K++G+ + I R+ DNFW+ G TGPCGPCSEI+YD H G
Sbjct: 129 VTIYHDDEEAFEYWSKDIGLSEDRIIRIATSDNFWSMGDTGPCGPCSEIFYDHGEHIWGG 188
Query: 226 CSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYE 285
D RFIE +NLVFMQYN++ DG++ PL ++++DTG+GLERI+ ILQ V +NYE
Sbjct: 189 PPGSPEEDGDRFIEIWNLVFMQYNRQSDGTMLPLPKQSVDTGMGLERISAILQGVHSNYE 248
Query: 286 TDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVR 345
DL +I A+ + N + D + +L+++ DH+R+ +L+SDGV PSN GRGYV+R
Sbjct: 249 IDLFQGLIAAAASVTN-----AQDMDDKSLRVVADHIRSCAFLISDGVMPSNEGRGYVLR 303
Query: 346 RLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKR- 404
R+IRRAVR G LG +G L A + + + EL A++Q I+E++ R
Sbjct: 304 RIIRRAVRHGNKLGAQGAFFFKLVAALIEQMGQAYPEL---------AKQQEIIEKVLRI 354
Query: 405 EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAE 464
EE +F +TLERG +L++ L+D G V + G F LYDT+GFP ++T +VA
Sbjct: 355 EEEQFGKTLERGLAILEESLSDL------KGDV--IPGDLVFKLYDTYGFPADLTADVAR 406
Query: 465 EHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTLSAKAIV 524
E +++D KGF+ M QR+ +Q A K D + L T+F GYD+ A V
Sbjct: 407 ERQMTIDHKGFEECMAVQRKTAQ---QAGKFGADYNEQLKSD-KHTDFKGYDSTHYSATV 462
Query: 525 ESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDV 584
+ G+ V + G + V+L+RTPFYAESGGQ GD G + V G T +
Sbjct: 463 VEVFAGGEAVQLLEDGQEGIVILDRTPFYAESGGQTGDTGTITVAGGEFNVTNTTK---- 518
Query: 585 KKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETS 644
LG+ F H GT+ +G + V +V+A +D R+ K +HTATH+L AL++++G+ S
Sbjct: 519 ---LGNAFAHHGTV-QGRIGVNDKVDATIDDARRENIKKNHTATHILHEALRQLLGEHVS 574
Query: 645 QAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIA 704
Q GSLV DRLRFDF+ + EL +IER++N I L T++MA+DDAK GA+A
Sbjct: 575 QKGSLVQADRLRFDFSHFEAVTKDELRDIERVVNDEIRRNFALNTELMAIDDAKAKGAMA 634
Query: 705 MFGEKYGEQVKI 716
+FGEKY ++V++
Sbjct: 635 LFGEKYDDEVRV 646
>gi|359445603|ref|ZP_09235327.1| alanyl-tRNA synthetase [Pseudoalteromonas sp. BSi20439]
gi|358040562|dbj|GAA71576.1| alanyl-tRNA synthetase [Pseudoalteromonas sp. BSi20439]
Length = 866
Score = 563 bits (1452), Expect = e-158, Method: Compositional matrix adjust.
Identities = 304/672 (45%), Positives = 429/672 (63%), Gaps = 42/672 (6%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR++FLDF+AS+ H+V+PS+SL+P D T+L AGM+QFK +FLG R RA +SQR
Sbjct: 9 IRQQFLDFFASKQHQVVPSSSLIPGNDATLLFNNAGMVQFKDVFLGAESRPYTRATSSQR 68
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI++AWEF T LP +L
Sbjct: 69 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAIKFAWEFLTEVVKLPKEKLL 128
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDF--HPDRG 225
+++Y DD+EAF W ++G+P + I R+ DNFW+ G TGPCGPCSEI+YD H G
Sbjct: 129 VTIYHDDEEAFGYWANDIGLPEDRIIRIATSDNFWSMGDTGPCGPCSEIFYDHGEHIWGG 188
Query: 226 CSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYE 285
D RFIE +NLVFMQYN++ DG++EPL ++++DTG+GLERI+ ILQ V +NYE
Sbjct: 189 PPGTPEEDGDRFIEIWNLVFMQYNRQIDGTMEPLPKQSVDTGMGLERISAILQGVHSNYE 248
Query: 286 TDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVR 345
DL +I A+ + N + D + +L+++ DH+R+ +L+SDGV PSN GRGYV+R
Sbjct: 249 IDLFQGLIAAAASVTN-----AQDMDDKSLRVVADHIRSCAFLISDGVMPSNEGRGYVLR 303
Query: 346 RLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKR- 404
R+IRRAVR G LG KG L A + + + EL A++Q I+E++ R
Sbjct: 304 RIIRRAVRHGNKLGAKGAFFYKLVAALIEQMGQAYPEL---------AKQQEIIEKVLRI 354
Query: 405 EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAE 464
EE +F +TLERG +L++ L+D +G V + G F LYDT+GFP ++T +VA
Sbjct: 355 EEEQFGKTLERGLAILEESLSDL------TGDV--IPGDLVFKLYDTYGFPADLTADVAR 406
Query: 465 EHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTLSAKAIV 524
E +++D +GF+ M QR+ +Q A K D + L T+F GYD+ + V
Sbjct: 407 ERQMTIDHQGFEACMAVQRKTAQ---QAGKFGADYNKQLKSD-KHTDFKGYDSNHYRGTV 462
Query: 525 ESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDV 584
+ G+ V + G ++L+RTPFYAESGGQIGD G + V G T +
Sbjct: 463 VEIFAGGESVSLLEDGQQGIIVLDRTPFYAESGGQIGDSGTITVAGGEFNVTNTTK---- 518
Query: 585 KKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETS 644
LG+ F H GT+ +G + V +V+A +D R+ K +HTATH+L AL++++G+ S
Sbjct: 519 ---LGNAFAHHGTV-QGRIGVNDKVDATIDDARRESIKKNHTATHILHEALRQLLGEHVS 574
Query: 645 QAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIA 704
Q GSLV DRLRFDF+ + EL EIER++N I L T++MA+DDAK GA+A
Sbjct: 575 QKGSLVQPDRLRFDFSHFEAVTKQELREIERVVNDEIRRNFALNTELMAIDDAKAKGAMA 634
Query: 705 MFGEKYGEQVKI 716
+FGEKY ++V++
Sbjct: 635 LFGEKYDDEVRV 646
>gi|313893025|ref|ZP_07826602.1| alanine--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412]
gi|313442378|gb|EFR60793.1| alanine--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412]
Length = 871
Score = 563 bits (1452), Expect = e-158, Method: Compositional matrix adjust.
Identities = 309/678 (45%), Positives = 430/678 (63%), Gaps = 44/678 (6%)
Query: 50 GDSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
G+ +R+ +L F+ S+GH L + SL+PE DP++LL AGM KP F GK+ R T
Sbjct: 3 GNELRQAYLQFFESKGHLKLDTFSLIPENDPSLLLIGAGMAPLKPFFTGKLVPPCRRITT 62
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
SQ C+RT D+ENVGRT+RHHTFFEMLGNFSFGDYFKKEAI WAWEF T L NRL++
Sbjct: 63 SQTCMRTGDLENVGRTARHHTFFEMLGNFSFGDYFKKEAIHWAWEFLTEVIKLDKNRLYV 122
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
+VY DD EA++ W+K+ GV HI R+ +DNFW G GPCGP SEI++D P+ GC D
Sbjct: 123 TVYPDDQEAYDTWHKDCGVEESHISRL--EDNFWEIG-EGPCGPDSEIFFDQGPEHGCDD 179
Query: 229 VDLG---DDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYE 285
+ D R++E +NLVF Q+NK DGS EPL+ KNIDTG GLER+A +LQ N+E
Sbjct: 180 PNCAPGCDCDRYLEIWNLVFTQFNKMPDGSYEPLQHKNIDTGAGLERLASVLQGCRTNFE 239
Query: 286 TDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVR 345
TDLI+PII+ ++ A V+Y + N T+++LK+I DH RA+ L+SDGV PSN GRGYV+R
Sbjct: 240 TDLIYPIIEATAKRAGVTYNE-NPNTDVSLKVIADHARAVTALISDGVLPSNEGRGYVLR 298
Query: 346 RLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKRE 405
R++RRAVR GRLLGI EG FL + + +E+ + ++ + ++ E
Sbjct: 299 RILRRAVRHGRLLGI--------EGIFLTPLVDVVVEILGPGIKSIAEKKDFVKRVVQNE 350
Query: 406 ELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEE 465
E RF QTLE+G +LL+ ++ D L+ + + VP G + F LYDT+GFP E+T+E+A E
Sbjct: 351 EERFNQTLEQGLELLNSLI-DTLAAEKAT-VVP---GSEVFKLYDTYGFPWELTEEIASE 405
Query: 466 HGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTL----SAK 521
G ++D +GF+ M+ QR +++ A V + A +A PD FL + L S K
Sbjct: 406 RGFTIDHEGFEAAMKEQRERAREAR------VKEDAKVA--TPDITFLKDEELLEDESVK 457
Query: 522 AIVESLLVNGKPVIKV---SKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAV 578
A S+L+ GK ++ + G ++ +++ TPF+AE GGQ+GD GF+ G
Sbjct: 458 A--SSVLMVGKGAKRLQTAADGDEITIIVRTTPFHAEGGGQLGDTGFIVGPMGK------ 509
Query: 579 VEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKV 638
VEV + K+ H GT+ EG + G +V VD R +HTATHLL AALK++
Sbjct: 510 VEVHNTKRLPEGTVYHIGTVVEGSISEGDDVALEVDTNRRSAMARNHTATHLLHAALKQI 569
Query: 639 IGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAK 698
+G +QAGSLV D LRFDF P+ EL++IE L+N + A L M++D+AK
Sbjct: 570 LGDHVNQAGSLVTPDYLRFDFTHFSPVTQEELDQIEALVNEEVLKATDLAIAEMSMDEAK 629
Query: 699 RAGAIAMFGEKYGEQVKI 716
GA+A+FG+KYG+ V++
Sbjct: 630 EKGAMALFGDKYGDVVRV 647
>gi|85712448|ref|ZP_01043497.1| Alanyl-tRNA synthetase [Idiomarina baltica OS145]
gi|85693726|gb|EAQ31675.1| Alanyl-tRNA synthetase [Idiomarina baltica OS145]
Length = 867
Score = 563 bits (1452), Expect = e-158, Method: Compositional matrix adjust.
Identities = 296/671 (44%), Positives = 424/671 (63%), Gaps = 40/671 (5%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR++F+ F+ RGH+ +PSAS++P DPT+L T AGM+ FK +FLG R RA ++QR
Sbjct: 8 IREKFIQFFEQRGHQRVPSASMIPANDPTLLFTNAGMVPFKDVFLGTDKRNYTRATSAQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK EAI++AW F T E LPA +LW
Sbjct: 68 CLRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKTEAIEFAWHFLTQELQLPAEKLW 127
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPD--RG 225
++V+E+DDEA++IW K +GVP + I R+G DNFW+ G TGPCGPCSE++YD P+ G
Sbjct: 128 VTVFEEDDEAYDIWAKHIGVPEDRISRIGVKDNFWSMGDTGPCGPCSEVFYDHGPEVWGG 187
Query: 226 CSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYE 285
D R+IE +NLVFMQYN++ DG++EPL +IDTG+GLERIA ILQ V +NYE
Sbjct: 188 PPGTPEEDGDRYIEIWNLVFMQYNRQADGTMEPLPNPSIDTGMGLERIAAILQGVHSNYE 247
Query: 286 TDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVR 345
D +IK+++++ VS D ++ +L++I DH+R+ +L++DGV PSN GRGYV+R
Sbjct: 248 IDTFQALIKRSADIIGVS-----DLSSKSLRVIADHIRSCSFLIADGVMPSNEGRGYVLR 302
Query: 346 RLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKRE 405
R+IRRAVR G LLG K F + ++ ++L ++ + I + LKRE
Sbjct: 303 RIIRRAVRHGNLLGAK--------QTFFYQLVDELVKLMGEAYPELVEKRHIIEDALKRE 354
Query: 406 ELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEE 465
E +F +TLERG +L+ + T L+G+ F LYDT+GFP+++T ++A E
Sbjct: 355 EQQFEKTLERGLAILNDEIKQLSGNT--------LNGEVVFKLYDTYGFPMDLTADIARE 406
Query: 466 HGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTLSAKAIVE 525
+ + +D +GF+ M+ QR ++Q A + VD +A + + + F GY A+ V
Sbjct: 407 NELVIDEEGFNAAMQAQRERAQ---KASQFGVDYNAQV-KATTKSVFDGYTEDKAQTTVV 462
Query: 526 SLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVK 585
L G V + G V+L TPFYAESGGQ+GD G L QG EV D
Sbjct: 463 ELFHEGTAVESLEAGQQGVVVLANTPFYAESGGQVGDTGVLLANQGR------FEVTDT- 515
Query: 586 KSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQ 645
+ +G H G + +++G V A +D + R + +H+ATHLL AAL+ ++G Q
Sbjct: 516 QYIGKAIAHHGQA-DCTIKLGDAVTAEIDSERRANIRRNHSATHLLHAALRDILGDHVQQ 574
Query: 646 AGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAM 705
GSLV +R+RFDF PL ++ E+ER++N I L T+VM +D+AK+AGA+A+
Sbjct: 575 KGSLVEAERMRFDFAHFEPLTKAQITELERVVNEQIRKNVRLTTQVMNIDEAKKAGAMAL 634
Query: 706 FGEKYGEQVKI 716
FGEKY + V++
Sbjct: 635 FGEKYDDDVRV 645
>gi|433654860|ref|YP_007298568.1| alanyl-tRNA synthetase [Thermoanaerobacterium thermosaccharolyticum
M0795]
gi|433293049|gb|AGB18871.1| alanyl-tRNA synthetase [Thermoanaerobacterium thermosaccharolyticum
M0795]
Length = 879
Score = 563 bits (1452), Expect = e-157, Method: Compositional matrix adjust.
Identities = 304/675 (45%), Positives = 436/675 (64%), Gaps = 35/675 (5%)
Query: 51 DSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATS 109
+ IR+++L F+ S+GH LPS SLVP+ D ++LL AGM KP F GK R T
Sbjct: 7 NEIREKYLSFFESKGHLRLPSFSLVPKNDKSLLLINAGMAPLKPYFTGKEIPPRKRVTTC 66
Query: 110 QRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWIS 169
Q+CIRT D+E VG+T+RH TFFEMLGNFSFGDYFKKEAI WAWEF T LP +RLW++
Sbjct: 67 QKCIRTPDIERVGKTARHGTFFEMLGNFSFGDYFKKEAIPWAWEFVTKVLELPEDRLWVT 126
Query: 170 VYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSDV 229
+YE+DDEA++IWNK VG+P E I RMG +DNFW G TGPCGPCSEIY+D ++GC
Sbjct: 127 IYENDDEAYDIWNKVVGLPPERIVRMGKEDNFWEIG-TGPCGPCSEIYFDRGEEKGCGKP 185
Query: 230 DLG---DDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYET 286
G D RFIEF+NLVF Q++K +G+ PL + NIDTG+GLER+A I+Q V + ++
Sbjct: 186 TCGVGCDCDRFIEFWNLVFTQFDKDSEGNYNPLPKPNIDTGMGLERMATIMQGVDSIFDV 245
Query: 287 DLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRR 346
D+I I E+A V Y + + +++L++I DH+R + +++SDG+ PSN GRGYV+RR
Sbjct: 246 DVIRGITDYVGEMAGVKYG-DDKKNDVSLRVITDHIRGVTFMISDGILPSNEGRGYVLRR 304
Query: 347 LIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREE 406
++RRA R G+LLG L+ FL ++ + +E + ++ R+ I + +K+EE
Sbjct: 305 ILRRAARYGKLLG--------LDKPFLHNVVDVVVEHYSGAYPELIERKDYIKKVIKKEE 356
Query: 407 LRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEH 466
RF +T+++G +LD+ + D S + L G AF LYDT+GFP+E+TKE+ E
Sbjct: 357 ERFKETIDQGLGILDEYINDLRSEGKTV-----LEGNKAFKLYDTYGFPIELTKEILNES 411
Query: 467 GVSVDMKGFDIEMENQR---RQSQAAHNAVKLSVDDSADLAEKIPD--TEFLGYDTLSAK 521
G++VD + E+E QR R S+ NA+ D+ + D T+F+GYD++ +
Sbjct: 412 GMTVDEDEYQKELEKQRLRARSSRKEDNALW-----EKDIYSTLKDIETKFVGYDSVKSD 466
Query: 522 AIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEV 581
A V +++ + + V G +V V+L+ TPFYAESGGQ+GD G + + V +
Sbjct: 467 AKVLAIIKDNELVDSAEAGEEVNVILDMTPFYAESGGQVGDKGVI------KNEDVFVNI 520
Query: 582 KDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQ 641
KD KK+ G+ FVH GT+ G+L VG VEA++D K R +HTATHLL +AL+K IG
Sbjct: 521 KDCKKAGGNKFVHIGTVERGILSVGDTVEALIDEKNRLSTARNHTATHLLHSALRKFIGD 580
Query: 642 ETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAG 701
QAGSLV +RLRFDF ++ L D E++ IE +N I + + ++M+ D+A + G
Sbjct: 581 HVHQAGSLVTPERLRFDFTHYQALTDEEIKTIENEVNEKIYENIDVSVEIMSQDEALKKG 640
Query: 702 AIAMFGEKYGEQVKI 716
A+A+F EKYG+ V++
Sbjct: 641 AMALFQEKYGDVVRV 655
>gi|59798539|sp|Q6LMU3.2|SYA_PHOPR RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
Length = 873
Score = 563 bits (1451), Expect = e-157, Method: Compositional matrix adjust.
Identities = 307/684 (44%), Positives = 433/684 (63%), Gaps = 46/684 (6%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S D IR+ FL F+ S+GH+++ S+SLVP DPT+L T AGM QFK FLG R RA
Sbjct: 4 STDEIRRAFLAFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDTFLGIEKRSYTRAT 63
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
T+QRC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI++AWEF T GLP
Sbjct: 64 TAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKQDAIKYAWEFLTDVLGLPQ 123
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEI 216
+RL +++YE DDEAF+IWNKE+G+P + I R+G A DNFW G TGPCGPCSEI
Sbjct: 124 DRLLVTIYETDDEAFDIWNKEMGIPADRIVRIGDNKGAPYASDNFWQMGDTGPCGPCSEI 183
Query: 217 YYDF--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIA 274
+YD H G D RFIE +N VFMQ+N++ DG++EPL + ++DTG+G+ERIA
Sbjct: 184 FYDHGEHIWGGRPGTPEEDGDRFIEIWNNVFMQFNRQADGTMEPLPKPSVDTGMGIERIA 243
Query: 275 RILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVF 334
I+Q V +NYE D+ +IKK++E+ + Y D +N +L+++ DH+R+ +L+ DGV
Sbjct: 244 AIMQGVHSNYEIDIFQTLIKKSAEV--IGY---EDLSNQSLRVVADHIRSCAFLIVDGVM 298
Query: 335 PSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAR 394
PSN GRGYV+RR+IRRAVR G LG GAF + E+ ++K R
Sbjct: 299 PSNEGRGYVLRRIIRRAVRHGNKLGAS--------GAFFYKLVGPLAEIMGTAGDELKKR 350
Query: 395 EQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGF 454
+ + + LK EE F +TL+RG +L+ L D LS L G+ F LYDT+GF
Sbjct: 351 QALVEKILKIEEDNFGRTLDRGLTILNDAL-DNLSG-------KELDGETVFKLYDTYGF 402
Query: 455 PVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLG 514
P ++T +VA E ++D +GF+ ME QR Q A A K VD + + + +TEF G
Sbjct: 403 PADLTNDVARERDFTIDEEGFNNAMEAQR---QRAREAGKFGVDYNESIKVDV-NTEFCG 458
Query: 515 YDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQ 574
Y +A++ + +L +G+ V + G D ++L+ TPFYAESGGQ GD G L
Sbjct: 459 YTGTAAQSSIVALYRDGEAVDSILAGEDALIILDNTPFYAESGGQCGDAGVL------TA 512
Query: 575 QTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAA 634
+ V V D +K G+ H+G++ +G L VG ++EA VD R ++H+ATHLL +A
Sbjct: 513 ENTVFNVSDTQK-FGAAIGHQGSLVQGALNVGDKLEAQVDVVRRTAITLNHSATHLLHSA 571
Query: 635 LKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMAL 694
L+ ++G+ +Q GSLV D LRFDF+ + +L EIER++N I + + T +M +
Sbjct: 572 LRNLLGEHVAQKGSLVKPDALRFDFSNLEAVKPEQLREIERVVNEQIRLNHSIDTNIMDI 631
Query: 695 DDAKRAGAIAMFGEKYGEQVKISS 718
+ AK+ GA+A+FGEKY ++V++ S
Sbjct: 632 ESAKQKGAMALFGEKYDDEVRVLS 655
>gi|392537849|ref|ZP_10284986.1| alanyl-tRNA ligase [Pseudoalteromonas marina mano4]
Length = 863
Score = 563 bits (1451), Expect = e-157, Method: Compositional matrix adjust.
Identities = 305/672 (45%), Positives = 429/672 (63%), Gaps = 42/672 (6%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR++FLDF+AS+ H+V+PS+SL+P D T+L AGM+QFK +FLG R RA +SQR
Sbjct: 6 IRQQFLDFFASKQHQVVPSSSLIPGNDATLLFNNAGMVQFKDVFLGAESRPYTRATSSQR 65
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK+EAI++AWEF T LP +L
Sbjct: 66 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQEAIKFAWEFLTEVVKLPQEKLL 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDF--HPDRG 225
+++Y DD+EAFE W+K++G+ + I R+ DNFW+ G TGPCGPCSEI+YD H G
Sbjct: 126 VTIYHDDEEAFEYWSKDIGLSEDRIIRIATSDNFWSMGDTGPCGPCSEIFYDHGEHIWGG 185
Query: 226 CSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYE 285
D RFIE +NLVFMQYN++ DG++ PL ++++DTG+GLERI+ ILQ V +NYE
Sbjct: 186 PPGSPEEDGDRFIEIWNLVFMQYNRQSDGTMLPLPKQSVDTGMGLERISAILQGVHSNYE 245
Query: 286 TDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVR 345
DL +I A+ + N + D + +L+++ DH+R+ +L+SDGV PSN GRGYV+R
Sbjct: 246 IDLFQGLIAAAASVTN-----AQDMDDKSLRVVADHIRSCAFLISDGVMPSNEGRGYVLR 300
Query: 346 RLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKR- 404
R+IRRAVR G LG +G L A + + + EL A++Q I+E++ R
Sbjct: 301 RIIRRAVRHGNKLGAQGAFFFKLVAALIEQMGQAYPEL---------AKQQEIIEKVLRI 351
Query: 405 EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAE 464
EE +F +TLERG +L++ L+D G V + G F LYDT+GFP ++T +VA
Sbjct: 352 EEEQFGKTLERGLAILEESLSDL------KGDV--IPGDLVFKLYDTYGFPADLTADVAR 403
Query: 465 EHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTLSAKAIV 524
E +++D KGF+ M QR+ +Q A K D + L T+F GYD+ A V
Sbjct: 404 ERQMTIDHKGFEECMAVQRKTAQ---QAGKFGADYNEQLKSD-KHTDFKGYDSTHYSATV 459
Query: 525 ESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDV 584
+ G+ V + G + V+L+RTPFYAESGGQ GD G + V G T +
Sbjct: 460 VEVFAGGEAVQLLEDGQEGIVILDRTPFYAESGGQTGDTGTITVAGGEFNVTNTTK---- 515
Query: 585 KKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETS 644
LG+ F H GT+ +G + V +V+A +D R+ K +HTATH+L AL++++G+ S
Sbjct: 516 ---LGNAFAHHGTV-QGRIGVNDKVDATIDDARRENIKKNHTATHILHEALRQLLGEHVS 571
Query: 645 QAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIA 704
Q GSLV DRLRFDF+ + EL +IER++N I L T++MA+DDAK GA+A
Sbjct: 572 QKGSLVQADRLRFDFSHFEAVTKDELRDIERVVNDEIRRNFALNTELMAIDDAKAKGAMA 631
Query: 705 MFGEKYGEQVKI 716
+FGEKY ++V++
Sbjct: 632 LFGEKYDDEVRV 643
>gi|429143626|gb|AFZ77081.1| alanyl-tRNA synthetase [gamma proteobacterium PEB0191]
Length = 877
Score = 563 bits (1451), Expect = e-157, Method: Compositional matrix adjust.
Identities = 307/682 (45%), Positives = 439/682 (64%), Gaps = 52/682 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+++ S+SLVP DP++L T AGM QFK +FLG R RA T+QR
Sbjct: 7 IRQMFLDFFHSKGHEIVESSSLVPHNDPSLLFTNAGMNQFKDVFLGVDNRAYSRATTAQR 66
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND++NVG T+RHHTFFEMLGNFSFGDYFK++AI +AWE T E F LP R
Sbjct: 67 CVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKRDAIHFAWELLTGEGWFNLPKER 126
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
L ++VYE DDEAF IW E+G+P E I R+G A DNFW G TGPCGPCSEI+Y
Sbjct: 127 LLVTVYETDDEAFNIWANEIGIPQEKIIRIGDNKGAPYASDNFWQMGDTGPCGPCSEIFY 186
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D RFIE +N+VFMQ+N+ DG++EPL + ++DTG+GLERI+
Sbjct: 187 D-HGDHIWGGPPGSPEEDGDRFIEIWNIVFMQFNRHADGTMEPLPKPSVDTGMGLERISA 245
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NYE DL +I+ +++ ++ D N +L++I DH+R+ +L++DGV P
Sbjct: 246 VLQHVNSNYEIDLFKVLIQDTAKVIGLT-----DLHNKSLRVIADHIRSCAFLIADGVLP 300
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN GRGYV+RR+IRRAVR G +LG K F + + I + D A++
Sbjct: 301 SNEGRGYVLRRIIRRAVRHGHMLGAKN--------VFFYKLVQSLINVMASA-GDQLAKK 351
Query: 396 QRILEE-LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGF 454
Q+++E+ LK EE +F++TLERG LL+Q L S +LSG+ AF LYDT+GF
Sbjct: 352 QKLVEDTLKSEEEQFLKTLERGLFLLNQELTKIQSN--------QLSGEVAFKLYDTYGF 403
Query: 455 PVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLG 514
P ++T +V E ++VD GF+ ME QR +S+ A N S+D S + +T+FLG
Sbjct: 404 PFDLTADVCREKDITVDEAGFNQCMEAQRNRSREADN---FSIDYSNTIKFD-GETQFLG 459
Query: 515 YDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQ 574
Y+ A V ++ GK V ++ +G + ++L++TPFY ESGGQ+GD G L TN
Sbjct: 460 YEVNELTATVVAIFQQGKSVNRIDQGDEAVIILDKTPFYGESGGQVGDKGIL---TATNI 516
Query: 575 QTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAA 634
VV+ + K++G H G + +G L+VG ++ AI++ +LR R + +H+ATHLLQAA
Sbjct: 517 NFEVVDSQKYGKNIG----HIGHLLQGQLQVGDKIAAIINDELRARIRRNHSATHLLQAA 572
Query: 635 LKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMAL 694
L++++G Q GSLV + LRFDF+ +P+ +++EIE L+N I + ++M +
Sbjct: 573 LQRILGSHVQQKGSLVNDNYLRFDFSHTQPIALAQIQEIENLVNQQIRRNYPVLVELMPI 632
Query: 695 DDAKRAGAIAMFGEKYGEQVKI 716
D+AK GA+A+FGEKY + V++
Sbjct: 633 DEAKNKGAMALFGEKYEDIVRV 654
>gi|422009862|ref|ZP_16356844.1| alanyl-tRNA ligase [Providencia rettgeri Dmel1]
gi|414092035|gb|EKT53714.1| alanyl-tRNA ligase [Providencia rettgeri Dmel1]
Length = 875
Score = 563 bits (1451), Expect = e-157, Method: Compositional matrix adjust.
Identities = 309/684 (45%), Positives = 430/684 (62%), Gaps = 52/684 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ ++GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 8 IRQAFLDFFHTKGHQVVSSSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRAYSRATTAQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AI++AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIRFAWELLTSEEWFNLPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VY DDEA++IWNKE+GVPVE I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYATDDEAYDIWNKEIGVPVERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +NLVFMQ+N++ DG++EPL + ++DTG+GLERI+
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNLVFMQFNRQSDGTMEPLPKPSVDTGMGLERISA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NYE D+ +I A+ + D N +L++I DH+R+ +L+SDGV P
Sbjct: 247 VLQHVNSNYEIDIFRDLIAAAA-----KATGATDLENKSLRVIADHIRSCAFLVSDGVIP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN GRGYV+RR+IRRAVR G +LG K L + + A EL R+
Sbjct: 302 SNEGRGYVLRRIIRRAVRHGYMLGAKDTFFYKLVAPLINVMGAAADEL---------GRQ 352
Query: 396 QRILEE-LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGF 454
Q ++E+ LK EE +F +TLERG +LLD+ LA T L G+ AF LYDT+GF
Sbjct: 353 QAMVEKVLKTEEEQFARTLERGLQLLDEELASLKGDT--------LDGEAAFRLYDTYGF 404
Query: 455 PVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLG 514
P+++T +V E + VD +GF+ ME+QRR+++ + D L + +EF G
Sbjct: 405 PIDLTADVCRERNIKVDEEGFERAMEDQRRRARESSGFGA----DYNSLIKVDKRSEFSG 460
Query: 515 YDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQ 574
Y +A + +L +G+PV ++ G + V+L++T FYAESGGQ+GD G+L N
Sbjct: 461 YQYDEQQATITALYKDGQPVDSLNAGEEGLVILDKTAFYAESGGQVGDTGYL------NN 514
Query: 575 QTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAA 634
+A +V D +K G H G + G L V + A VD R +++H+ATHLL AA
Sbjct: 515 DSASFKVTDTQK-YGQAIGHIGKVEAGSLVVNHRITAFVDSARRDAIRLNHSATHLLHAA 573
Query: 635 LKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMAL 694
L++V+G SQ GSLV LRFDF+ + +L ++E ++N I + ++T++M L
Sbjct: 574 LRQVLGDHVSQKGSLVNDKYLRFDFSHFEAMTQDQLRQVEDIVNAQIRKNSEIETELMDL 633
Query: 695 DDAKRAGAIAMFGEKYGEQVKISS 718
+ AK GA+A+FGEKY E+V++ S
Sbjct: 634 EGAKAKGAMALFGEKYEERVRVLS 657
>gi|374297120|ref|YP_005047311.1| alanyl-tRNA synthetase [Clostridium clariflavum DSM 19732]
gi|359826614|gb|AEV69387.1| alanyl-tRNA synthetase [Clostridium clariflavum DSM 19732]
Length = 879
Score = 563 bits (1451), Expect = e-157, Method: Compositional matrix adjust.
Identities = 302/672 (44%), Positives = 437/672 (65%), Gaps = 27/672 (4%)
Query: 51 DSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATS 109
+ +R+R+L F+ +GH LPS SL+P+ DP++LL +GM KP F GK R T
Sbjct: 7 NELRERYLKFFEGKGHLRLPSFSLIPQNDPSLLLINSGMAPLKPYFTGKEEPPRRRVTTC 66
Query: 110 QRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWIS 169
Q+CIRT D+ENVG+T+RH TFFEMLGNFSFGDYFKKEAI WAWEF T E +P +RLW+S
Sbjct: 67 QKCIRTPDIENVGKTARHGTFFEMLGNFSFGDYFKKEAIPWAWEFVTQELKMPVDRLWVS 126
Query: 170 VYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCS-- 227
+YE+DDEAFEIWNK+VGVP E I RMG DNFW G TGPCGPCSEIY+D ++GC
Sbjct: 127 IYEEDDEAFEIWNKDVGVPAERIVRMGKKDNFWEHG-TGPCGPCSEIYFDRGVEKGCGKP 185
Query: 228 DVDLGDDT-RFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYET 286
D +G D RFIEF+NLVF Q+NK +DG+ L NIDTG+GLER+A I+Q V N +E
Sbjct: 186 DCKVGCDCDRFIEFWNLVFTQFNKDEDGNYTRLPNPNIDTGMGLERLACIMQDVDNLFEV 245
Query: 287 DLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRR 346
D + ++ + A V Y +S ++ ++++++I DH+R+ ++SDGV PSN GRGYV+RR
Sbjct: 246 DTVRNVLDYVCKTAGVKYHES-EKKDISIRVITDHIRSTTMMVSDGVIPSNEGRGYVLRR 304
Query: 347 LIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREE 406
L+RRA R G+LLGI FL IA I S +++ + + I + +K EE
Sbjct: 305 LLRRAARHGKLLGIN--------KPFLYDIAMVVINESKEAYPELEEKRKYIQDVIKNEE 356
Query: 407 LRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEH 466
+F T+++G +L + + + ++ ++ ++G+ AF L+ T+GFP+++T+E+AEE
Sbjct: 357 EKFELTIDQGLIILSKYIEETKAKNSKT-----ITGEMAFELHGTYGFPIDLTREIAEES 411
Query: 467 GVSVDMKGFDIEMENQRRQSQAAHNAVKLSV--DDSADLAEKIPDTEFLGYDTLSAKAIV 524
G+SVD +GF EME R+ ++ + + S DD +K TEFLGY +A+A V
Sbjct: 412 GLSVDEEGFREEMEKHRKIAKEDYLKKQGSAWSDDIYSTLDKNIKTEFLGYSENAAEAKV 471
Query: 525 ESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDV 584
++ N + ++G +V ++L+RTPFYAESGGQ+GD G + + ++V+D
Sbjct: 472 MYIIKNDQVTESATEGDEVILILDRTPFYAESGGQVGDKGVI------ESEEVKIKVEDC 525
Query: 585 KKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETS 644
KK+ ++H G + +G ++VG V+A +D K R +HT THLLQ ALK V+G
Sbjct: 526 KKTEDGKYLHYGVVEKGNVKVGASVKAAIDAKRRMAIARNHTTTHLLQKALKNVLGDHVH 585
Query: 645 QAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIA 704
QAGSLV DRLRFDF + E+ ++E+ +N I ++ +++T + +D+AKR GA A
Sbjct: 586 QAGSLVEPDRLRFDFAHFTAMTPEEIAKVEKEVNDKILESIMVETMELPIDEAKRLGATA 645
Query: 705 MFGEKYGEQVKI 716
+FGEKYG V++
Sbjct: 646 LFGEKYGSIVRV 657
>gi|157374457|ref|YP_001473057.1| alanyl-tRNA synthetase [Shewanella sediminis HAW-EB3]
gi|205830208|sp|A8FSV6.1|SYA_SHESH RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|157316831|gb|ABV35929.1| Alanine--tRNA ligase [Shewanella sediminis HAW-EB3]
Length = 874
Score = 563 bits (1451), Expect = e-157, Method: Compositional matrix adjust.
Identities = 305/680 (44%), Positives = 430/680 (63%), Gaps = 48/680 (7%)
Query: 52 SIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQ 110
++R FL+++ + GH+V+ S+SLVP DPT+L T AGM QFK +FLG+ R RA +SQ
Sbjct: 7 ALRSAFLEYFRTNGHQVVDSSSLVPVNDPTLLFTNAGMNQFKDVFLGEDKRSYTRATSSQ 66
Query: 111 RCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRL 166
RC+R ND++NVG T+RHHTFFEMLGNFSFGDYFK++AI +AW F T E LP RL
Sbjct: 67 RCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKRDAISFAWNFLTQELKLPKERL 126
Query: 167 WISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYYD 219
+++YE DDEA++IW KE+GVP E++ R+G A DNFW G TGPCGPCSEI+YD
Sbjct: 127 CVTIYETDDEAYDIWTKEIGVPAENLIRIGDNKGAPYASDNFWQMGDTGPCGPCSEIFYD 186
Query: 220 FHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARI 276
H D G D RFIE +N+VFMQYN++ DG + PL + ++DTG+G+ERIA I
Sbjct: 187 -HGDHIWGGRPGTPEEDGDRFIEIWNIVFMQYNRQSDGEMLPLPKPSVDTGMGIERIAAI 245
Query: 277 LQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPS 336
+Q V +NYE D+ +IKK +E+ +V+ D N +L++I DH+R+ +L++DGV PS
Sbjct: 246 MQGVHSNYEIDIFQALIKKTAEILSVT-----DLENKSLRVISDHIRSCAFLIADGVMPS 300
Query: 337 NIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQ 396
N GRGYV+RR+IRRAVR G LG +F + IE+ + A +
Sbjct: 301 NEGRGYVLRRIIRRAVRHGNKLGAS--------DSFFYKLVPTLIEVMGDAAKGLVATQA 352
Query: 397 RILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPV 456
+ + LK EE +F +TLERG +LD L +AL G V L G+ AF LYDT+GFPV
Sbjct: 353 IVEKSLKAEEEQFARTLERGLGILDGAL-NAL-----KGDV--LDGETAFKLYDTYGFPV 404
Query: 457 EITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYD 516
++T +V E ++VD GF++ M QR ++QAA + +DS + E T F GY
Sbjct: 405 DLTADVCREREITVDEAGFEVAMAEQRSRAQAA-GQFETDYNDSLKIDEL---THFSGYT 460
Query: 517 TLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQT 576
L+A + ++ + G+ V +S G + ++L+ TPFY ESGGQ GD G L + +
Sbjct: 461 ELTAPGKITAIYMAGESVNSLSAGDEAVIVLDSTPFYGESGGQCGDRGVL------SAKG 514
Query: 577 AVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALK 636
+VKD +K G H+G + G L VG +EA VD KLR R +++H+ THLL AAL+
Sbjct: 515 IEFDVKDTQK-YGQAVGHQGALTSGTLSVGDSLEANVDKKLRHRTELNHSVTHLLHAALR 573
Query: 637 KVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDD 696
+++G +Q GSLV +RLRFDF+ + EL+ +E L+N I + L +VM +D
Sbjct: 574 QLLGTHVTQKGSLVDSERLRFDFSHFEGVKPEELKAVEDLVNTQIRRNHKLSAEVMDMDQ 633
Query: 697 AKRAGAIAMFGEKYGEQVKI 716
AK GA+A+FGEKY ++V++
Sbjct: 634 AKEKGAMALFGEKYTDEVRV 653
>gi|262066712|ref|ZP_06026324.1| alanine--tRNA ligase [Fusobacterium periodonticum ATCC 33693]
gi|291379511|gb|EFE87029.1| alanine--tRNA ligase [Fusobacterium periodonticum ATCC 33693]
Length = 867
Score = 563 bits (1450), Expect = e-157, Method: Compositional matrix adjust.
Identities = 294/674 (43%), Positives = 432/674 (64%), Gaps = 35/674 (5%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
+G+ IR++F++F+ + HK SASL+P+DPT+LLT+AGM+ FKP FLG+ PR T
Sbjct: 3 TGNEIREKFIEFFMQKQHKHFESASLIPDDPTLLLTVAGMVPFKPYFLGQKEAPYPRVTT 62
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
Q+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFK+EAI W+WEF T L ++LW+
Sbjct: 63 YQKCIRTNDLENVGRTARHHTFFEMLGNFSFGDYFKEEAIAWSWEFVTEVLKLNKDKLWV 122
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYD----FHPDR 224
+V+ DDEA IW ++ P E I RMG +N+W++G TG CGPCSEI+ D + D
Sbjct: 123 TVFTTDDEAERIWIEKCNFPKERIVRMGESENWWSAGPTGSCGPCSEIHVDLGVQYGGDE 182
Query: 225 GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNY 284
D G D RFIE +NLVF ++N+ +DGSLEPL +KNIDTG GLERIA ++Q PNN+
Sbjct: 183 NSKIGDEGTDNRFIEIWNLVFTEWNRMEDGSLEPLPKKNIDTGAGLERIAAVVQGKPNNF 242
Query: 285 ETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVV 344
ETDL+FPI+++A+ + Y + N TN +LK+I DH RA+ +L++DGV PSN GRGY++
Sbjct: 243 ETDLLFPILEEAARITGSQYGK-NSETNFSLKVITDHARAVTFLVNDGVIPSNEGRGYIL 301
Query: 345 RRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKR 404
RR++RRAVR GRLLG K F+ + +K +E D+K + I + +K
Sbjct: 302 RRILRRAVRHGRLLGYK--------DLFMYKMVDKVVERFEVAYPDLKKNLENIRKIVKI 353
Query: 405 EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAE 464
EE +F TL++G +L++Q + + L+ + +L G+ +F LYDT+GFP E+T+E+AE
Sbjct: 354 EEEKFSNTLDQGIQLVNQEIDNLLANGKN-----KLDGEISFKLYDTYGFPYELTEEIAE 408
Query: 465 EHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDS--ADLAEKIPDTEFLGYDTLSAKA 522
E GV+V + F+ +ME Q+ ++++A V DS D +K T+F GY+ + +A
Sbjct: 409 ERGVTVLREEFEAKMEEQKEKARSAREVVMEKGQDSFIEDFYDKHGVTKFTGYENIQDEA 468
Query: 523 IVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVK 582
LL + + +K ++ ++TPFYAESGGQ+GD G +Y + + V + K
Sbjct: 469 ---KLLSS-----REAKDGKYLLIFDKTPFYAESGGQVGDQGRIYSDDFSAKVLDVQKQK 520
Query: 583 DVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQE 642
D +F+H I +G E + + V+ R +HTATHLL AL++V+G
Sbjct: 521 D-------IFIHTVEIEKGSAEENKTYKLEVNLLRRLDTAKNHTATHLLHKALREVVGTH 573
Query: 643 TSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGA 702
QAGSLV D+LRFDF+ + + +L +IE ++N I + + ++++AK GA
Sbjct: 574 VQQAGSLVDPDKLRFDFSHYEAVTAEQLAKIENIVNEKIREGIEVVVSHHSIEEAKNLGA 633
Query: 703 IAMFGEKYGEQVKI 716
+ +FG+KYGE V++
Sbjct: 634 MMLFGDKYGEVVRV 647
>gi|422940107|ref|ZP_16967464.1| alanine--tRNA ligase [Fusobacterium nucleatum subsp. animalis ATCC
51191]
gi|339890261|gb|EGQ79416.1| alanine--tRNA ligase [Fusobacterium nucleatum subsp. animalis ATCC
51191]
Length = 867
Score = 563 bits (1450), Expect = e-157, Method: Compositional matrix adjust.
Identities = 292/676 (43%), Positives = 435/676 (64%), Gaps = 39/676 (5%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
+G+ IR++F++F+ + HK SASL+P+DPT+LLT+AGM+ FKP FLG+ PR T
Sbjct: 3 TGNEIREKFIEFFMQKQHKHFESASLIPDDPTLLLTVAGMVPFKPYFLGQKEAPCPRVTT 62
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
Q+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFKKEAI+W+WEF T + ++LW+
Sbjct: 63 YQKCIRTNDLENVGRTARHHTFFEMLGNFSFGDYFKKEAIKWSWEFVTEVLKIDKDKLWV 122
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYD----FHPDR 224
+V+ DDEA +IW +E P E I RMG +N+W++G TG CGPCSEI+ D + D
Sbjct: 123 TVFTTDDEAEKIWTEECNFPKERIVRMGESENWWSAGPTGSCGPCSEIHVDLGVQYGGDE 182
Query: 225 GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNY 284
+ G D RFIE +NLVF ++N+ +DGSLEPL +KNIDTG GLERIA ++Q NN+
Sbjct: 183 NSKIGEEGTDNRFIEIWNLVFTEWNRMEDGSLEPLPKKNIDTGAGLERIAAVVQGKTNNF 242
Query: 285 ETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVV 344
ETDL+FPI+++A+++ Y + N T+ +LK+I DH RA+ +L++DGV PSN GRGY++
Sbjct: 243 ETDLLFPILEEAAKITGSQYGK-NSETDFSLKVITDHARAVTFLINDGVIPSNEGRGYIL 301
Query: 345 RRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKR 404
RR++RRAVR GRLLG K F+ + +K +E D+K + I + +K
Sbjct: 302 RRILRRAVRHGRLLGYK--------DLFMYKMVDKVVEKFEVAYPDLKKNLENIRKIVKI 353
Query: 405 EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAE 464
EE +F TL++G +L++Q + + L+ + +L G+ +F LYDT+GFP E+T+E+AE
Sbjct: 354 EEEKFSNTLDQGMQLVNQEIDNLLANGKN-----KLDGEISFKLYDTYGFPYELTEEIAE 408
Query: 465 EHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPD----TEFLGYDTLSA 520
E GV+V + F+ +ME Q+ ++++A V DS EK D T+F GY+
Sbjct: 409 ERGVTVLREEFEAKMEEQKEKARSAREVVMEKGQDS--FIEKFYDKYGVTKFTGYEKTED 466
Query: 521 KAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVE 580
+ + SL + +K ++ ++TPFYAESGGQ+GD G +Y + +
Sbjct: 467 EGKLLSL--------REAKDGKYLLIFDKTPFYAESGGQVGDQGKIY------SDDFIGK 512
Query: 581 VKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIG 640
V DV+K +F+H +G+ E + + VD R +HTATHLL AL++V+G
Sbjct: 513 VLDVQKQ-KDIFIHTVEFEKGIAEENKTYKLEVDIVRRLDTAKNHTATHLLHKALREVVG 571
Query: 641 QETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRA 700
QAGSLV ++LRFDF+ + L +L +IE ++N I ++ + ++++AK+
Sbjct: 572 THVQQAGSLVDPEKLRFDFSHYEALTTEQLSKIEDIVNEKIRESIEVNISHHSIEEAKKL 631
Query: 701 GAIAMFGEKYGEQVKI 716
GA+ +FG+KYG+ V++
Sbjct: 632 GAMMLFGDKYGDVVRV 647
>gi|350532395|ref|ZP_08911336.1| alanyl-tRNA synthetase [Vibrio rotiferianus DAT722]
Length = 860
Score = 563 bits (1450), Expect = e-157, Method: Compositional matrix adjust.
Identities = 315/687 (45%), Positives = 431/687 (62%), Gaps = 51/687 (7%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S D +R FL F+ S+GH+++ S+SLVP DPT+L T AGM QFK FLG R RA
Sbjct: 4 STDEVRNAFLKFFESKGHQIVESSSLVPHNDPTLLFTNAGMNQFKDCFLGLEKRAYTRAT 63
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
T+QRC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI +AWEF T LPA
Sbjct: 64 TAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIAFAWEFLTETLKLPA 123
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG--------ADDNFWNSGATGPCGPCSE 215
+RL ++VYE DDEAF+IWNK+VGVP + I R+G DNFW G TGPCGPC+E
Sbjct: 124 DRLLVTVYETDDEAFDIWNKKVGVPADRIIRIGDKKGGKPYESDNFWQMGDTGPCGPCTE 183
Query: 216 IYYDF--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERI 273
I+YD H G D RFIE +N VFMQ+N+ DG++EPL + ++DTG+G+ERI
Sbjct: 184 IFYDHGEHIWGGRPGTPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPSVDTGMGIERI 243
Query: 274 ARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGV 333
+ I+Q V +NYE D+ +IK A+E+ + Y D +N +L++I DH+R+ +L+ DGV
Sbjct: 244 SAIMQGVHSNYEIDVFQALIKAAAEV--IGY---EDLSNQSLRVIADHIRSCSFLIVDGV 298
Query: 334 FPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKA 393
PSN GRGYV+RR+IRRAVR G LG +G L G + EL
Sbjct: 299 MPSNEGRGYVLRRIIRRAVRHGNKLGAQGAFFHKLVGVLADIMGTAGEELK--------- 349
Query: 394 REQRILEELKR-EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTF 452
R+Q ++E++ R EE F +TLERG +L++ L D L G V L G+ F LYDT+
Sbjct: 350 RQQAVVEKVLRIEEENFGRTLERGMAILNEAL-DNL-----DGKV--LDGETVFKLYDTY 401
Query: 453 GFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKI-PDTE 511
GFP ++T +VA E ++D +GF+ ME QR++++ A N D +A A K+ TE
Sbjct: 402 GFPADLTNDVAREREFAIDEEGFEKAMEEQRQRAREAGN---FGTDYNA--AIKVDTQTE 456
Query: 512 FLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQG 571
F GY + V ++ V G V +S G ++L TPFYAESGGQ GD G + G
Sbjct: 457 FCGYTGTKGSSSVAAMFVEGNEVDSLSAGDKAIIVLGETPFYAESGGQCGDAGEIRTESG 516
Query: 572 TNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLL 631
V V+D +K LG+ H G + EGVL G EV IVD + R ++H+ATHLL
Sbjct: 517 ------VFRVEDTQK-LGNAIAHHGVMAEGVLAKGDEVATIVDAERRAAISLNHSATHLL 569
Query: 632 QAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKV 691
AAL++++G+ +Q GSLV D LRFDF+ + EL+E+ERL+N I + ++T V
Sbjct: 570 HAALRQLLGEHVTQKGSLVKPDSLRFDFSHLEAVTAAELKEVERLVNSQIRRNHKVETNV 629
Query: 692 MALDDAKRAGAIAMFGEKYGEQVKISS 718
M ++ AK+ GA+A+FGEKY ++V++ S
Sbjct: 630 MDIESAKKKGAMALFGEKYDDEVRVLS 656
>gi|408827100|ref|ZP_11211990.1| alanyl-tRNA ligase [Streptomyces somaliensis DSM 40738]
Length = 889
Score = 563 bits (1450), Expect = e-157, Method: Compositional matrix adjust.
Identities = 306/678 (45%), Positives = 423/678 (62%), Gaps = 33/678 (4%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQRC 112
IR+R+L F+ RGH V+PSASL+ +DPT+LL AGM+ FKP FLG+ PRAA+ Q+C
Sbjct: 6 IRRRWLSFFEERGHTVVPSASLIADDPTLLLVPAGMVPFKPYFLGEAKPPFPRAASVQKC 65
Query: 113 IRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE-----FGLPANRLW 167
+RT D+E VG+T+RH TFF+M GNFSFGDYFK+ AI+ AWE T +GL +LW
Sbjct: 66 VRTPDIEEVGKTTRHGTFFQMCGNFSFGDYFKEGAIKLAWELLTTPVEHGGYGLEPEKLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCS 227
I+VY++DDEA IW VGVP E I+R+G NFW+ G GPCGPCSEI YD P+ G
Sbjct: 126 ITVYQEDDEAERIWRDVVGVPAERIQRLGMGPNFWSMGVPGPCGPCSEINYDRGPEFGVE 185
Query: 228 DVDLGDDTRFIEFYNLVFMQY------NKKDDGSLEPLKQKNIDTGLGLERIARILQKVP 281
+D R++E +NLVFMQY K+D L L KNIDTGLGLER+A ILQ V
Sbjct: 186 GGPAVNDERYVEIWNLVFMQYERGEGTGKEDFPILGDLPSKNIDTGLGLERLAMILQGVR 245
Query: 282 NNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRG 341
N YETD + +I +A+EL V Y ++ D ++++L+++ DH+R V L+ DGV P N GRG
Sbjct: 246 NMYETDTLKVVIDQATELTGVRYGEAQD-SDVSLRVVADHMRTSVMLIGDGVTPGNEGRG 304
Query: 342 YVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEE 401
YV+RR++RRA+R RLLG G G L + ++ E+ EL T +RI
Sbjct: 305 YVLRRIMRRAIRNMRLLGATGPVVGRLVDTVIRTMGEQYPELETD--------RKRIETV 356
Query: 402 LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKE 461
EE F++TL+ G +LD A++ T+ +G L G AFLL+DT+GFP+++T E
Sbjct: 357 ALAEEAAFLKTLKAGTNILDT----AVTETKAAGG-GVLPGDKAFLLHDTWGFPIDLTLE 411
Query: 462 VAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSA---DLAEKIPDTEFLGYDTL 518
+A E G+SVD +GF M QR +++A A K D ++A+ TEF GY +
Sbjct: 412 MAAEQGLSVDEEGFRRLMREQRERAKADARAKKTGHADVTAYREIADTAGATEFTGYTST 471
Query: 519 SAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAV 578
++ + LLVNG P S+G DVEV+L+RTPFYAE GGQI D G + + G AV
Sbjct: 472 EGESTIVGLLVNGVPSPAASEGDDVEVVLDRTPFYAEGGGQIADTGRIRLHGG-----AV 526
Query: 579 VEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKV 638
++V+DV++ + V VHKG+++ G + VG A +D R+ H+ATHL AL+
Sbjct: 527 IQVRDVQQPVPGVSVHKGSVQVGEVTVGATAYAAIDVARRRAIARAHSATHLTHQALRDA 586
Query: 639 IGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAK 698
+G +QAGS R RFDF + T + ++E+ IN + + +VMA+D+AK
Sbjct: 587 LGPTAAQAGSENQPGRFRFDFGSPSAVPQTVMTDVEQKINEVLARELDVHAEVMAIDEAK 646
Query: 699 RAGAIAMFGEKYGEQVKI 716
R GAIA FGEKYGE+V++
Sbjct: 647 RQGAIAEFGEKYGERVRV 664
>gi|303229350|ref|ZP_07316140.1| alanine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a]
gi|302515886|gb|EFL57838.1| alanine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a]
Length = 872
Score = 563 bits (1450), Expect = e-157, Method: Compositional matrix adjust.
Identities = 308/676 (45%), Positives = 427/676 (63%), Gaps = 40/676 (5%)
Query: 50 GDSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
G+ +R+ +L F+ S+GH L S SL+PE DP++LL AGM KP F GK+ R T
Sbjct: 3 GNELRQAYLQFFESKGHLKLDSFSLIPENDPSLLLIGAGMAPLKPFFTGKLVPPCHRITT 62
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
SQ+C+RT D+ENVGRT+RHHTFFEMLGNFSFGDYFKK+AI WAWEF T L NRL++
Sbjct: 63 SQKCMRTGDLENVGRTARHHTFFEMLGNFSFGDYFKKDAIHWAWEFLTEVIKLDKNRLYV 122
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
+VY DD EA++ W+ + GV HI R+ +DNFW G GPCGP SEI++D P+ GC D
Sbjct: 123 TVYPDDQEAYDTWHNDCGVEESHITRL--EDNFWEIG-EGPCGPDSEIFFDQGPEHGCDD 179
Query: 229 VDLG---DDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYE 285
+ D R++E +NLVF Q+NK DGS EPL+ KNIDTG GLER+A +LQ N+E
Sbjct: 180 PNCAPGCDCDRYLEIWNLVFTQFNKMPDGSYEPLQHKNIDTGAGLERLASVLQHCKTNFE 239
Query: 286 TDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVR 345
TDLIFPII+ ++ A V Y + + T+++LK+I DH RA+ L+SDGV PSN GRGYV+R
Sbjct: 240 TDLIFPIIEATAKRAGVKYNE-DPNTDVSLKVIADHARAVTALISDGVLPSNEGRGYVLR 298
Query: 346 RLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKRE 405
R++RRAVR GRLLGI EG FL + + +++ + ++ + ++ E
Sbjct: 299 RILRRAVRHGRLLGI--------EGLFLTPLIDVVVDILGPGIKSIAEKQDFVKRVVQNE 350
Query: 406 ELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEE 465
E RF QTLE+G +LL+ ++ D L+ + + VP G + F LYDT+GFP E+T+E+A E
Sbjct: 351 EERFNQTLEQGLELLNSLI-DTLAAEKAT-VVP---GTEVFKLYDTYGFPWELTEEIASE 405
Query: 466 HGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTL--SAKAI 523
G ++D +GFD M+ QR +++ A V + A +A PD FL + L +
Sbjct: 406 RGFTIDHEGFDAAMKEQRERAREAR------VKEDAKVA--TPDITFLKDEELVENEAET 457
Query: 524 VESLLVNGKPVIKVSK---GSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVE 580
S+L+ GK ++ G ++ V++ TPF+AE GGQ+GD GF+ G VE
Sbjct: 458 ASSVLMLGKGSERLQTAVDGDEITVIVRTTPFHAEGGGQLGDTGFIVGPMGK------VE 511
Query: 581 VKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIG 640
V + K+ H GT+ EG + G +V VD R +HTATHLL AALK+V+G
Sbjct: 512 VHNTKRLPEGTVYHIGTVVEGSISEGDDVTLEVDTARRAAMARNHTATHLLHAALKRVLG 571
Query: 641 QETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRA 700
+ +QAGSLV D LRFDF P+ EL++IE L+N I A L M++D+AK
Sbjct: 572 EHVNQAGSLVTPDYLRFDFTHFSPVTQEELDQIEALVNEEILKATDLAIAEMSMDEAKAK 631
Query: 701 GAIAMFGEKYGEQVKI 716
GA+A+FG+KYG+ V++
Sbjct: 632 GAMALFGDKYGDVVRV 647
>gi|59711143|ref|YP_203919.1| alanyl-tRNA synthetase [Vibrio fischeri ES114]
gi|71657966|sp|Q5E7G5.1|SYA_VIBF1 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|59479244|gb|AAW85031.1| alanyl-tRNA synthetase [Vibrio fischeri ES114]
Length = 859
Score = 563 bits (1450), Expect = e-157, Method: Compositional matrix adjust.
Identities = 315/685 (45%), Positives = 434/685 (63%), Gaps = 48/685 (7%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S D IR+ FL F+ S+GH+++ S+SLVP DPT+L T AGM QFK FLG R RA
Sbjct: 4 STDEIRRAFLAFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDCFLGSEKRNYTRAT 63
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
T+QRC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI++AWEF T LPA
Sbjct: 64 TAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKQDAIKYAWEFLTERLELPA 123
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEI 216
+RL ++VYE DDEAFEIWNKE+G+P + I R+G A DNFW G TGPCGPC+EI
Sbjct: 124 DRLLVTVYETDDEAFEIWNKEMGIPADRIVRIGDNKGAPYASDNFWQMGDTGPCGPCTEI 183
Query: 217 YYDF--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIA 274
+YD H G D RFIE +N VFMQ+N+ DG++EPL + ++DTG+G+ERIA
Sbjct: 184 FYDHGEHIWGGRPGTPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPSVDTGMGIERIA 243
Query: 275 RILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVF 334
I+Q V +NYE D+ +IK+A+++ + Y +D +N +L+++ DH+R+ YL+ DGV
Sbjct: 244 AIMQGVHSNYEIDIFQTLIKEAAKV--IGY---DDLSNQSLRVVADHIRSCSYLIVDGVM 298
Query: 335 PSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAR 394
PSN GRGYV+RR+IRRAVR G LG KG L G + EL +
Sbjct: 299 PSNEGRGYVLRRIIRRAVRHGNKLGAKGSYFYKLVGPLAEIMGTAGEELK---------K 349
Query: 395 EQRILEE-LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFG 453
+Q ++E+ LK EE F +TLERG +L++ L D L G+V L G+ F LYDT+G
Sbjct: 350 QQALVEKVLKIEEENFGRTLERGMAILNEAL-DNL-----EGTV--LDGETVFKLYDTYG 401
Query: 454 FPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFL 513
FP ++T +VA E +++D GF+ ME QR Q A A + D +A + + +T F
Sbjct: 402 FPADLTNDVARERELTIDEDGFEKAMEEQR---QRAREAGQFGTDYNAVIKVE-SETVFH 457
Query: 514 GYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTN 573
GYD+ AKA V +L G+ V +S G D ++L++TPFYAESGGQ GD G + V
Sbjct: 458 GYDSTEAKASVVALFREGEEVDALSAGDDAILILDQTPFYAESGGQCGDAGIITV----- 512
Query: 574 QQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQA 633
+T V D K +G+ H G + EGVL A VD R ++H+ATHLL A
Sbjct: 513 -ETGKFVVTDTHK-IGNAIGHHGKLVEGVLSKADHAMAQVDETRRAAIILNHSATHLLHA 570
Query: 634 ALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMA 693
AL++V+G+ +Q GSLV + LRFDF+ + EL ++ER++N I + ++T +M
Sbjct: 571 ALRQVLGEHVTQKGSLVKAENLRFDFSHLEAVKAEELRQVERIVNQQIRLNHTIETDLMD 630
Query: 694 LDDAKRAGAIAMFGEKYGEQVKISS 718
+D AK GA+A+FGEKY ++V++ S
Sbjct: 631 IDAAKEKGAMALFGEKYDDEVRVLS 655
>gi|170727677|ref|YP_001761703.1| alanyl-tRNA synthetase [Shewanella woodyi ATCC 51908]
gi|205830209|sp|B1KPS5.1|SYA_SHEWM RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|169813024|gb|ACA87608.1| alanyl-tRNA synthetase [Shewanella woodyi ATCC 51908]
Length = 874
Score = 563 bits (1450), Expect = e-157, Method: Compositional matrix adjust.
Identities = 304/680 (44%), Positives = 423/680 (62%), Gaps = 48/680 (7%)
Query: 52 SIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQ 110
++R FL+++ + GH+V+ S+SLVP DPT+L T AGM QFK +FLG+ R RA +SQ
Sbjct: 7 ALRSAFLEYFRTNGHQVVDSSSLVPVNDPTLLFTNAGMNQFKDVFLGEDKRSYTRATSSQ 66
Query: 111 RCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRL 166
RC+R ND++NVG T+RHHTFFEMLGNFSFGDYFK+EAI +AW F T E LP RL
Sbjct: 67 RCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKREAISFAWNFLTQELKLPKERL 126
Query: 167 WISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYYD 219
+++YE DDEAF+IW KE+GVP E + R+G A DNFW G TGPCGPCSEI+YD
Sbjct: 127 CVTIYETDDEAFDIWTKEIGVPAESLIRIGDNKGAPYASDNFWQMGDTGPCGPCSEIFYD 186
Query: 220 FHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARI 276
H D G D RFIE +N+VFMQYN++ G + PL + ++DTG+G+ERIA I
Sbjct: 187 -HGDHIWGGRPGTPEEDGDRFIEIWNIVFMQYNRQASGEMLPLPKPSVDTGMGIERIAAI 245
Query: 277 LQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPS 336
+Q V +NYE D+ +IKK +E+ V+ D N +L++I DH+R+ +L++DGV PS
Sbjct: 246 MQGVHSNYEIDIFQALIKKTAEILGVT-----DLENKSLRVISDHIRSCAFLIADGVMPS 300
Query: 337 NIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQ 396
N GRGYV+RR+IRRAVR G LG +F + IE+ + +
Sbjct: 301 NEGRGYVLRRIIRRAVRHGNKLGAT--------SSFFYKLVPTLIEVMGDAAKGLVETQA 352
Query: 397 RILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPV 456
+ + LK EE +F +TLERG +LD L + G V L G+ AF LYDT+GFPV
Sbjct: 353 IVEKSLKAEEEQFARTLERGLGILDGALNEL------KGDV--LDGETAFKLYDTYGFPV 404
Query: 457 EITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYD 516
++T +V E ++VD GF++ M QR ++QAA +DS + E +T F GY
Sbjct: 405 DLTADVCREREITVDEAGFEVAMAEQRSRAQAA-GQFDTDYNDSLKIDE---ETHFSGYT 460
Query: 517 TLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQT 576
L+A+ V ++ G+ ++ G D ++L+ TPFY ESGGQ GD G L +
Sbjct: 461 ELTAQGKVTAIYKAGESTDSLNAGEDAVIVLDSTPFYGESGGQCGDKGLL------TAKG 514
Query: 577 AVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALK 636
+VKD +K G H+GT+ G + VG +EAIVD KLR R +++H+ THLL AAL+
Sbjct: 515 VEFDVKDTQK-YGQAVGHQGTVNSGSISVGDTLEAIVDKKLRHRTELNHSVTHLLHAALR 573
Query: 637 KVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDD 696
+++G +Q GSLV +RLRFDF+ + EL+ +E L+N I + L VM +D
Sbjct: 574 QLLGTHVTQKGSLVDAERLRFDFSHFEGVKPEELKAVEDLVNTQIRRNHKLSADVMDMDQ 633
Query: 697 AKRAGAIAMFGEKYGEQVKI 716
AK GA+A+FGEKY ++V++
Sbjct: 634 AKERGAMALFGEKYTDEVRV 653
>gi|282850479|ref|ZP_06259858.1| alanine--tRNA ligase [Veillonella parvula ATCC 17745]
gi|282579972|gb|EFB85376.1| alanine--tRNA ligase [Veillonella parvula ATCC 17745]
Length = 871
Score = 563 bits (1450), Expect = e-157, Method: Compositional matrix adjust.
Identities = 307/676 (45%), Positives = 427/676 (63%), Gaps = 40/676 (5%)
Query: 50 GDSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
G+ +R+ +L F+ S+GH L S SL+PE DP++LL AGM KP F GK+ R T
Sbjct: 3 GNELRQAYLQFFESKGHLKLDSFSLIPENDPSLLLIGAGMAPLKPFFTGKLVPPCHRITT 62
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
SQ+C+RT D+ENVGRT+RHHTFFEMLGNFSFGDYFKKEAI WAWEF T L NRL++
Sbjct: 63 SQKCMRTGDLENVGRTARHHTFFEMLGNFSFGDYFKKEAIHWAWEFLTEVIKLDKNRLYV 122
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
+VY DD EA++ W+ + GV HI R+ +DNFW G GPCGP SEI++D P+ GC D
Sbjct: 123 TVYPDDQEAYDTWHNDCGVEESHITRL--EDNFWEIG-EGPCGPDSEIFFDQGPEHGCDD 179
Query: 229 VDLG---DDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYE 285
+ D R++E +NLVF Q+NK DGS EPL+ KNIDTG GLER+A +LQ N+E
Sbjct: 180 PNCAPGCDCDRYLEIWNLVFTQFNKMPDGSYEPLQHKNIDTGAGLERLASVLQGCKTNFE 239
Query: 286 TDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVR 345
TDLIFPII+ ++ A V Y + + T+++LK+I DH RA+ L+SDGV PSN GRGYV+R
Sbjct: 240 TDLIFPIIEATAKRAGVKYNE-DPNTDVSLKVIADHARAVTALISDGVLPSNEGRGYVLR 298
Query: 346 RLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKRE 405
R++RRAVR GRLLGI EG FL + + +++ + ++ + ++ E
Sbjct: 299 RILRRAVRHGRLLGI--------EGIFLTPLIDVVVDILGPGIKSIAEKQDFVKRVVQNE 350
Query: 406 ELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEE 465
E RF QTLE+G +LL+ ++ D L+ ++ +P G + F LYDT+GFP E+T+E+A E
Sbjct: 351 EERFNQTLEQGLELLNSLI-DTLA-AEKAAVIP---GTEVFKLYDTYGFPWELTEEIASE 405
Query: 466 HGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTL--SAKAI 523
G ++D +GF+ M+ QR +++ A V + A +A PD FL + L
Sbjct: 406 RGFTIDHEGFEAAMKEQRERAREAR------VKEDAKVA--TPDITFLKDEELVEDEAET 457
Query: 524 VESLLVNGKPVIKV---SKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVE 580
S+L+ GK ++ + G ++ V++ TPF+AE GGQ+GD GF+ G VE
Sbjct: 458 ASSVLMLGKGSERLQTAADGDEITVIVRTTPFHAEGGGQLGDTGFIVGPMGK------VE 511
Query: 581 VKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIG 640
+ + K+ H GT+ EG + G +V VD R +HTATHLL AALKKV+G
Sbjct: 512 IHNTKRLPEGTVYHIGTVIEGSISEGDDVTLEVDTNRRAAMARNHTATHLLHAALKKVLG 571
Query: 641 QETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRA 700
+ +QAGSLV D LRFDF P+ EL++IE L+N I A L M++D+AK
Sbjct: 572 EHVNQAGSLVTPDYLRFDFTHFSPVTQEELDQIEALVNEEILKATDLAIAEMSMDEAKAK 631
Query: 701 GAIAMFGEKYGEQVKI 716
GA+A+FG+KYG+ V++
Sbjct: 632 GAMALFGDKYGDVVRV 647
>gi|339444074|ref|YP_004710078.1| alanyl-tRNA synthetase [Eggerthella sp. YY7918]
gi|338903826|dbj|BAK43677.1| alanyl-tRNA synthetase [Eggerthella sp. YY7918]
Length = 878
Score = 562 bits (1449), Expect = e-157, Method: Compositional matrix adjust.
Identities = 299/674 (44%), Positives = 423/674 (62%), Gaps = 34/674 (5%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATS--Q 110
IR+++L F+ +G K PS+SL+P+DP++LLT AGM+QFKP FL + + P T+ Q
Sbjct: 9 IREKYLSFFEEKGCKRWPSSSLIPDDPSLLLTSAGMVQFKPYFLQQKQLEAPYIGTTTVQ 68
Query: 111 RCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWISV 170
+C+RTND++ +G T RH +FFEMLGNFSFG YFKKE WA+EFST GLPA RL+ +V
Sbjct: 69 KCVRTNDIDIIGTTGRHQSFFEMLGNFSFGAYFKKEMCAWAYEFSTEVLGLPAERLYFTV 128
Query: 171 YEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSDVD 230
Y DDDE EIW K +GVP +HI R+G +DNFW +G TGPCGPCSEIYYD + GC D
Sbjct: 129 YLDDDETIEIW-KSLGVPDDHISRLGEEDNFWRAGPTGPCGPCSEIYYDQGEEFGCGSPD 187
Query: 231 LG---DDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETD 287
D RF+E++NLVF QY+ ++DG+ PL +KNIDTG+GLERIA ILQ V +NYETD
Sbjct: 188 CAPGCDCDRFLEYWNLVFTQYDGQEDGTFVPLPKKNIDTGMGLERIAAILQGVQSNYETD 247
Query: 288 LIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRL 347
++ ++ +L +Y + + +L+L+I+ DH RA+ ++++DG+ PSN GRGYV+RRL
Sbjct: 248 VLRSLVAVGEKLTGTTYGE-DPAADLSLRIMADHSRAVAFMIADGILPSNEGRGYVLRRL 306
Query: 348 IRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREEL 407
+RRAV G LLG L+ FL ++ + L H+ ++ + + + EE
Sbjct: 307 LRRAVMKGHLLG--------LDKPFLNDYVDEIVNLMGHVYPEIVENRELMRRVILSEEE 358
Query: 408 RFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHG 467
RF L +G LD+ L DAL G V L G AF L+DT+GFPVE+T E+ E
Sbjct: 359 RFGANLRQGRAYLDEAL-DAL-----EGDV--LPGDRAFTLHDTYGFPVEVTCELCSERN 410
Query: 468 VSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDS-----ADLAEKIPDTEFLGYDTLSAKA 522
+ VDM+GF M+ QR +++AA+ + + +++AE + TEF GY +A
Sbjct: 411 IEVDMEGFGQCMDEQRERARAANTKDAEAAWSTYGGVMSEIAEAVGPTEFCGYTKNEDEA 470
Query: 523 IVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVK 582
V +L+ +G V + G + V+L+ TPFYAE GGQIGD G L + AVV V
Sbjct: 471 RVLALVKDGAQVDALEAGDEGRVVLDATPFYAEKGGQIGDTGTL------TKDGAVVRVL 524
Query: 583 DVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQE 642
D K+ + H + EG L VG V+A++D R+R + +HTATH+L AL++V+G
Sbjct: 525 DTKEPEKGLIAHTVQVEEGRLVVGDTVQALIDVPRRERIRRNHTATHILHWALRQVLGDH 584
Query: 643 TSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGA 702
QAGS VA +RLRFDF + ++ E+ERL N I + + + +L A+ AG
Sbjct: 585 VKQAGSYVADNRLRFDFTHFEAMTADQIAEVERLANQKIMENHPVHAYETSLAKAREAGV 644
Query: 703 IAMFGEKYGEQVKI 716
+A+FGEKYGE V++
Sbjct: 645 MALFGEKYGEVVRV 658
>gi|417949416|ref|ZP_12592552.1| alanyl-tRNA synthetase [Vibrio splendidus ATCC 33789]
gi|342808374|gb|EGU43534.1| alanyl-tRNA synthetase [Vibrio splendidus ATCC 33789]
Length = 860
Score = 562 bits (1449), Expect = e-157, Method: Compositional matrix adjust.
Identities = 309/686 (45%), Positives = 427/686 (62%), Gaps = 49/686 (7%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S D +R FL F+ S+GH+++ S+SLVP DPT+L T AGM QFK FLG R RA
Sbjct: 4 STDEVRNAFLKFFESKGHQIVDSSSLVPHNDPTLLFTNAGMNQFKDCFLGAEKRAYTRAT 63
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
T+QRC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI +AWEF T LP
Sbjct: 64 TAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAITFAWEFLTETLQLPK 123
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG--------ADDNFWNSGATGPCGPCSE 215
+RL ++VYE DDEAF+IWNK+VGVP + I R+G DNFW G TGPCGPC+E
Sbjct: 124 DRLLVTVYETDDEAFDIWNKKVGVPADRIVRIGDKEGGKKFESDNFWTMGDTGPCGPCTE 183
Query: 216 IYYDF--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERI 273
I+YD H G D RFIE +N VFMQ+N+ DG++EPL + +DTG+G+ERI
Sbjct: 184 IFYDHGEHIWGGRPGTPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPAVDTGMGIERI 243
Query: 274 ARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGV 333
+ I+Q V +NYE D+ +IK +E + Y D +N +L++I DH+R+ +L++DGV
Sbjct: 244 SAIMQGVHSNYEIDVFQKLIKATAE--TIGY---EDLSNQSLRVIADHIRSCSFLIADGV 298
Query: 334 FPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKA 393
PSN GRGYV+RR+IRRAVR G LG +G L G + A EL
Sbjct: 299 MPSNEGRGYVLRRIIRRAVRHGNKLGAQGVFFHKLVGVLAEVMGSAADELK--------- 349
Query: 394 REQRILEELKR-EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTF 452
++Q ++E++ R EE F +TLERG +L++ L DAL L G+ F LYDT+
Sbjct: 350 KQQELVEKVLRIEEENFGRTLERGMVILNEAL-DALEG-------KELDGETVFKLYDTY 401
Query: 453 GFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEF 512
GFP ++T +VA E ++D +GF+ ME QR Q A A + D +A + + +TEF
Sbjct: 402 GFPADLTNDVARERDFTIDEEGFEKAMEVQR---QRAREAGQFGTDYNATIKVE-TNTEF 457
Query: 513 LGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGT 572
GY + +L V G+ V +S G ++L TPFYAESGGQ GD G L G
Sbjct: 458 CGYTGTEGAGEISALFVEGEEVASLSAGDKAIIILEETPFYAESGGQCGDTGTLKTASG- 516
Query: 573 NQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQ 632
+ +V+D +K LG+ F H G + EGV G +VEA VD + R ++H+ATHLL
Sbjct: 517 -----LFKVEDTQK-LGNAFAHHGELVEGVFAKGDKVEATVDAERRAAISLNHSATHLLH 570
Query: 633 AALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVM 692
AAL++V+G+ +Q GSLV D LRFDF+ + +L+E+ERL+N + + ++T +M
Sbjct: 571 AALREVLGEHVAQKGSLVKPDNLRFDFSNLEAVTPEQLKEVERLVNAQVRKNHAIETNIM 630
Query: 693 ALDDAKRAGAIAMFGEKYGEQVKISS 718
++ AK GA+A+FGEKY ++V++ S
Sbjct: 631 DIESAKEKGAMALFGEKYDDEVRVLS 656
>gi|148978178|ref|ZP_01814708.1| alanyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
gi|145962600|gb|EDK27876.1| alanyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
Length = 860
Score = 562 bits (1449), Expect = e-157, Method: Compositional matrix adjust.
Identities = 308/686 (44%), Positives = 427/686 (62%), Gaps = 49/686 (7%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S D +R FL F+ S+GH+++ S+SLVP DPT+L T AGM QFK FLG R RA
Sbjct: 4 STDEVRNAFLKFFESKGHQIVDSSSLVPHNDPTLLFTNAGMNQFKDCFLGAEKRAYTRAT 63
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
T+QRC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI +AWEF T LP
Sbjct: 64 TAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIAFAWEFLTETLQLPK 123
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG--------ADDNFWNSGATGPCGPCSE 215
+RL ++VYE DDEAF+IWNK+VGVP + I R+G DNFW G TGPCGPC+E
Sbjct: 124 DRLLVTVYETDDEAFDIWNKKVGVPADRIVRIGDKEGGKQFESDNFWTMGDTGPCGPCTE 183
Query: 216 IYYDF--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERI 273
I+YD H G D RFIE +N VFMQ+N+ DG++EPL + +DTG+G+ERI
Sbjct: 184 IFYDHGEHIWGGRPGTPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPAVDTGMGIERI 243
Query: 274 ARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGV 333
+ I+Q V +NYE D+ +IK +E + Y D +N +L++I DH+R+ +L++DGV
Sbjct: 244 SAIMQGVHSNYEIDVFQKLIKATAE--TIGY---EDLSNQSLRVIADHIRSCSFLIADGV 298
Query: 334 FPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKA 393
PSN GRGYV+RR+IRRAVR G LG +G L G + A EL
Sbjct: 299 MPSNEGRGYVLRRIIRRAVRHGNKLGAQGVFFHKLVGVLAEVMGSAAEELK--------- 349
Query: 394 REQRILEELKR-EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTF 452
++Q ++E++ R EE F +TLERG +L++ L DAL L G+ F LYDT+
Sbjct: 350 KQQELVEKVLRIEEENFGRTLERGMVILNEAL-DALEG-------KELDGETVFKLYDTY 401
Query: 453 GFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEF 512
GFP ++T +VA E ++D GF+ ME QR Q A A + D +A + + +TEF
Sbjct: 402 GFPADLTNDVARERDFTIDEAGFEKAMEVQR---QRAREAGQFGTDYNATIKVE-TNTEF 457
Query: 513 LGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGT 572
GY + +L V G+ V +S G ++L TPFYAESGGQ GD G L G
Sbjct: 458 CGYTGTEGAGEISALFVEGEEVASLSAGDKAIIILEETPFYAESGGQCGDTGTLKTASG- 516
Query: 573 NQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQ 632
+ +V+D +K LG+ F H G + EGV G +VEA VD + R ++H+ATHLL
Sbjct: 517 -----LFKVEDTQK-LGNAFAHHGELVEGVFAKGDKVEATVDAERRAAISLNHSATHLLH 570
Query: 633 AALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVM 692
AAL++V+G+ +Q GSLV D LRFDF+ + +++E+ERL+N + ++++T +M
Sbjct: 571 AALREVLGEHVAQKGSLVKPDNLRFDFSNLEAVTPAQIKEVERLVNAQVRKNHVIETNIM 630
Query: 693 ALDDAKRAGAIAMFGEKYGEQVKISS 718
++ AK GA+A+FGEKY ++V++ S
Sbjct: 631 DIESAKEKGAMALFGEKYDDEVRVLS 656
>gi|254245667|ref|ZP_04938988.1| Alanyl-tRNA synthetase, class IIc [Burkholderia cenocepacia PC184]
gi|124870443|gb|EAY62159.1| Alanyl-tRNA synthetase, class IIc [Burkholderia cenocepacia PC184]
Length = 897
Score = 562 bits (1449), Expect = e-157, Method: Compositional matrix adjust.
Identities = 304/679 (44%), Positives = 428/679 (63%), Gaps = 44/679 (6%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR++FL F+ S+GH ++ S+SLVP DPT++ T +GM+QFK +FLG PR RA T+QR
Sbjct: 29 IREKFLKFFESKGHTIVRSSSLVPGNDPTLMFTNSGMVQFKDVFLGTDPRPYSRATTAQR 88
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AI++AWE T + LP ++LW
Sbjct: 89 SVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIKFAWELLTTVYQLPKDKLW 148
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYYDF 220
++VY++DDEA++IW KEVGVP E I R+G A DNFW G TGPCGPC+EI+YD
Sbjct: 149 VTVYQEDDEAYDIWAKEVGVPTERIIRIGDNKGARYASDNFWTMGDTGPCGPCTEIFYDH 208
Query: 221 HPD--RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQ 278
PD G D R+IE +NLVFMQ+N+ G++ L ++++DTG+GLER+A +LQ
Sbjct: 209 GPDVWGGPPGSPEEDGDRYIEIWNLVFMQFNRDAQGNMTRLPKQSVDTGMGLERLAAVLQ 268
Query: 279 KVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNI 338
V +NYE DL +IK A+ + +S D TN +LK+I DH+RA +L+ DGV P N
Sbjct: 269 HVHSNYEIDLFQNLIKAAARVTEIS-----DLTNNSLKVIADHIRACSFLIVDGVIPGNE 323
Query: 339 GRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRI 398
GRGYV+RR++RRA+R G LG KG F +A+ E+ T ++K EQR+
Sbjct: 324 GRGYVLRRIVRRAIRHGYKLGRKG-------AFFHKLVADLVAEMGTAY-PELKEAEQRV 375
Query: 399 LEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEI 458
+ L++EE RF +T+E G +L+ LAD ++ G V L G+ AF L+DT+GFP+++
Sbjct: 376 TDVLRQEEERFFETIEHGMSILEAALADVEAK---GGKV--LDGELAFKLHDTYGFPLDL 430
Query: 459 TKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTL 518
T +V E G++VD FD M QR Q++AA + L T F GY+ +
Sbjct: 431 TADVCRERGMTVDEPAFDDAMARQREQARAAGK-----FKATQGLEYSGAKTTFHGYEEI 485
Query: 519 S-AKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTA 577
+ A V +L V+G V +V G D V+L+ TPFYAESGGQ+GD G L N T
Sbjct: 486 AFDDAKVVALYVDGSAVNEVKAGQDAVVVLDHTPFYAESGGQVGDQGVL-----ANAATR 540
Query: 578 VVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKK 637
V D K V H GT+ +G L+VG + A +D + R R + +H+ATHL+ AL++
Sbjct: 541 FA-VADTLKVQADVIGHHGTLEQGTLKVGDVLRAEIDAQRRARTQRNHSATHLMHKALRE 599
Query: 638 VIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDA 697
V+G Q GSLV D+ RFDF + P+ D E+ +E+++N I +VM D+A
Sbjct: 600 VLGAHVQQKGSLVDADKTRFDFAHNAPMTDDEIRRVEQIVNDEILANAPGIVRVMPYDEA 659
Query: 698 KRAGAIAMFGEKYGEQVKI 716
+ GA+A+FGEKYG++V++
Sbjct: 660 VKGGAMALFGEKYGDEVRV 678
>gi|304310760|ref|YP_003810358.1| alanyl-tRNA synthetase [gamma proteobacterium HdN1]
gi|301796493|emb|CBL44701.1| Alanyl-tRNA synthetase [gamma proteobacterium HdN1]
Length = 876
Score = 562 bits (1449), Expect = e-157, Method: Compositional matrix adjust.
Identities = 300/683 (43%), Positives = 437/683 (63%), Gaps = 54/683 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IRK FLD++A GH+++PS+SL+P DPT+L T AGM+QFK +FLG+ R RA TSQR
Sbjct: 6 IRKAFLDYFAVNGHQIVPSSSLIPGNDPTLLFTNAGMVQFKDVFLGRDARDYRRATTSQR 65
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AI++AWEF T E LP +
Sbjct: 66 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKPDAIRFAWEFLTGERWLKLPKEK 125
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VY DDEA++IW ++VGVPV+ + R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 126 LWVTVYATDDEAYDIWTQQVGVPVDRVVRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 185
Query: 219 D-----FHPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERI 273
D F G D D GD R+IE +N+VFMQ+++ DG+L PL + ++DTG+GLERI
Sbjct: 186 DHGEEIFGGPPGSKDED-GD--RYIEIWNIVFMQFDRHPDGTLNPLPKPSVDTGMGLERI 242
Query: 274 ARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGV 333
A +LQ V +NYE DL ++ +++ + D + +L+++ DH+RA +L++DGV
Sbjct: 243 AAVLQHVHSNYEIDLFAHLLDAVAKVTG-----AKDLQDKSLRVVADHIRACAFLIADGV 297
Query: 334 FPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKA 393
PSN GRGYV+RR++RRA+R G LG + E F +A A E+ +++
Sbjct: 298 VPSNEGRGYVLRRIMRRAIRHGNKLGAQ-------EPFFYKLVAALAAEMGDAY-PELRK 349
Query: 394 REQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFG 453
+ +I + + +EE +F +TL++G ++L+Q L + + + G F LYDT+G
Sbjct: 350 LQAQIEKTILQEEEQFARTLDQGLRILEQELT--------AHQLTEIPGDLVFKLYDTYG 401
Query: 454 FPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFL 513
FP ++T ++A E +S+DM GF+ M Q+ +SQ + + D+ D++ + T F
Sbjct: 402 FPADLTADIARERDLSLDMGGFEQRMAAQKERSQKSSQFAG-NYHDALDISTQ---TVFS 457
Query: 514 GYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTN 573
GY S +A VE+L GKPV VS G D V+L++TPFYAESGGQ+GD G +
Sbjct: 458 GYSDTSGQAKVEALFFQGKPVSSVSAGQDAIVVLDQTPFYAESGGQVGDVGLI------R 511
Query: 574 QQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQA 633
+ A EV D K G +H G + G + VG VEA V+ +LRQ +++H+ATHLL A
Sbjct: 512 KAGACFEVADTHKQ-GGAHLHHGVLVSGQISVGDVVEAEVNAELRQAIRLNHSATHLLHA 570
Query: 634 ALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMA 693
AL++V+G+ Q GS+V RLRFDF+ L ELE+IER++N + + + T++M
Sbjct: 571 ALRQVLGEHVHQKGSMVTAGRLRFDFSNPSALSPAELEQIERIVNDQVRGNSEIITEIMP 630
Query: 694 LDDAKRAGAIAMFGEKYGEQVKI 716
+D A+ GA+A+FGEKY ++V++
Sbjct: 631 IDQARAKGAMALFGEKYEDEVRV 653
>gi|292487293|ref|YP_003530165.1| alanyl-tRNA synthetase [Erwinia amylovora CFBP1430]
gi|292900336|ref|YP_003539705.1| alanyl-tRNA synthetase [Erwinia amylovora ATCC 49946]
gi|428784225|ref|ZP_19001717.1| alanyl-tRNA synthetase [Erwinia amylovora ACW56400]
gi|291200184|emb|CBJ47312.1| alanyl-tRNA synthetase [Erwinia amylovora ATCC 49946]
gi|291552712|emb|CBA19757.1| Alanyl-tRNA synthetase [Erwinia amylovora CFBP1430]
gi|426277364|gb|EKV55090.1| alanyl-tRNA synthetase [Erwinia amylovora ACW56400]
Length = 876
Score = 562 bits (1449), Expect = e-157, Method: Compositional matrix adjust.
Identities = 305/690 (44%), Positives = 429/690 (62%), Gaps = 64/690 (9%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG+ R RAA+SQR
Sbjct: 8 IRQAFLDFFQSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGQDKRNYTRAASSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEF--STVEFGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK EAI +AWE S+ FGLP +
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHEAIAFAWELLTSSQWFGLPKEK 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEAF IW KE+GVP E I R+G A DNFW G TGPCGPCSEI++
Sbjct: 128 LWVTVYETDDEAFNIWEKEIGVPRERIIRIGDNKGSAYASDNFWQMGDTGPCGPCSEIFF 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++ PL + ++DTG+GLERI
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMLPLPKPSVDTGMGLERITA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NYE DL +I+ +++ + D +N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYEIDLFAQLIQSVAQVTGAT-----DLSNKSLRVIADHIRSCAFLIADGVIP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG EG F + I + D+K+++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGA--------EGTFFYKLVAPLIAVMGAAGDDLKSQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + L+ EE +F +TLERG LLD+ L E+ L G+ F LYDTFGFP
Sbjct: 354 SQVEQVLRTEEEQFAKTLERGLALLDEEL--------ENLQGDMLDGETVFRLYDTFGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA-------HNAVKLSVDDSADLAEKIP 508
V++T +V E + +D GF+ ME QR++++ A +N +++ D A
Sbjct: 406 VDLTADVCRERNLKIDEAGFERAMEQQRQRARDASGFGSDYNNVIRI---DQA------- 455
Query: 509 DTEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYV 568
+EF GY L A + ++ V+G+ +S G + ++L+ TPFYAESGGQ+GD G L
Sbjct: 456 -SEFKGYQQLQLNAAISAIFVDGQAANTISAGQEGVIVLDATPFYAESGGQVGDTGKL-- 512
Query: 569 TQGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTAT 628
QG + V + +++G H G + G L VG V A VD R R +++H+AT
Sbjct: 513 -QGNSASFIVSNTQKYAQAIG----HSGKLAIGELRVGDCVAAQVDEARRARIRLNHSAT 567
Query: 629 HLLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQ 688
HLL AAL++V+GQ SQ GSLV LRFDF+ + E+ ++E ++N I ++
Sbjct: 568 HLLHAALRQVLGQHVSQKGSLVNDTYLRFDFSQFEAMTPQEMRQVEEIVNAQIRRNLPIE 627
Query: 689 TKVMALDDAKRAGAIAMFGEKYGEQVKISS 718
T +M L+ AK GA+A+FGEKY + V++ S
Sbjct: 628 TNIMELEAAKAHGAMALFGEKYDDHVRVLS 657
>gi|429143630|gb|AFZ77083.1| alanyl-tRNA synthetase [Gilliamella apicola]
Length = 877
Score = 562 bits (1449), Expect = e-157, Method: Compositional matrix adjust.
Identities = 312/685 (45%), Positives = 440/685 (64%), Gaps = 58/685 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK IFLG R RA TSQR
Sbjct: 7 IRQNFLDFFQSKGHEVVASSSLVPHNDPTLLFTNAGMNQFKDIFLGIDKRSYTRATTSQR 66
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND++NVG T+RHHTFFEMLGNFSFGDYFK++AI +AWE T E F +P +
Sbjct: 67 CVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKRDAIYFAWELLTSEKWFNIPKEK 126
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
L ++VYE DDEAF IW E+G+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 127 LTVTVYETDDEAFSIWENEIGIPKERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 186
Query: 219 DFHPDR------GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLER 272
D H D G ++ D GD RFIE +N+VFMQ+N+ +G +EPL + ++DTG+GLER
Sbjct: 187 D-HGDHIWGGPPGSAEED-GD--RFIEIWNIVFMQFNRNSNGIMEPLPKPSVDTGMGLER 242
Query: 273 IARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDG 332
IA +LQ V +NYE DL +I++A+++ S +S +L++I DH+R+ +L+SDG
Sbjct: 243 IAAVLQHVNSNYEIDLFKKLIQEAAKIIETSDLESK-----SLRVIADHIRSCAFLISDG 297
Query: 333 VFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVK 392
V PSN GRGYV+RR+IRRAVR G +LG KG F + + I++ +++
Sbjct: 298 VLPSNEGRGYVLRRIIRRAVRHGHMLGAKG--------IFFYKLVKPLIDVMDIAATELN 349
Query: 393 AREQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTF 452
+ + + LK EE +F++TLERG LLDQ L + +G++ L G AF LYDT+
Sbjct: 350 QNRKIVEDTLKIEEEQFLKTLERGLFLLDQEL------VKITGTI--LPGDVAFKLYDTY 401
Query: 453 GFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPD-TE 511
GFP+++T +V E +++D GF+ ME QR++ A + SVD S + K+ D TE
Sbjct: 402 GFPLDLTADVCREKNITIDESGFNQCMEEQRKR---ARESSSFSVDYSNVI--KLDDKTE 456
Query: 512 FLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQG 571
FLGY + V ++ NG+ V ++ G D V+L++TPFY ESGGQIGD G L
Sbjct: 457 FLGYQDTESLGKVIAIFKNGQKVECINAGDDAIVILDKTPFYGESGGQIGDKGLL---TS 513
Query: 572 TNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLL 631
N + +V++ + KS+G H G + +G L+VG V A +D +LR+R + +H+ATHLL
Sbjct: 514 ANLEFSVLDSQKYGKSIG----HLGHVIKGSLKVGDNVTAAIDIELRERIRRNHSATHLL 569
Query: 632 QAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKV 691
QAAL++++G Q GSLV + LRFDF+ ++ + ++ EIE L+N I + +
Sbjct: 570 QAALQRILGNHVHQKGSLVNENYLRFDFSHNQAITPEQINEIENLVNQQIRHNLQVDIEF 629
Query: 692 MALDDAKRAGAIAMFGEKYGEQVKI 716
M +DDAK GA+A+FGEKY V++
Sbjct: 630 MPIDDAKNKGAMALFGEKYENIVRV 654
>gi|443628974|ref|ZP_21113311.1| putative Alanyl-tRNA synthetase [Streptomyces viridochromogenes
Tue57]
gi|443337572|gb|ELS51877.1| putative Alanyl-tRNA synthetase [Streptomyces viridochromogenes
Tue57]
Length = 890
Score = 562 bits (1449), Expect = e-157, Method: Compositional matrix adjust.
Identities = 301/678 (44%), Positives = 430/678 (63%), Gaps = 33/678 (4%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQRC 112
IR+R+L F+ RGH V+PSASL+ +DPT+LL AGM+ FKP FLG+V PRA + Q+C
Sbjct: 6 IRRRWLSFFEERGHTVVPSASLIADDPTLLLVPAGMVPFKPYFLGEVKPPFPRATSVQKC 65
Query: 113 IRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE-----FGLPANRLW 167
+RT D+E VG+T+RH TFF+M GNFSFGDYFK+ AI+ AWE T +GL RLW
Sbjct: 66 VRTPDIEEVGKTTRHGTFFQMCGNFSFGDYFKEGAIKLAWELLTSPQDKGGYGLDPERLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCS 227
I+VY+DDDEA IW++ VGVP+E I+R+G DNFW+ G GPCGPCSEI YD P+ G
Sbjct: 126 ITVYKDDDEAERIWHEVVGVPMERIQRLGMKDNFWSMGVPGPCGPCSEINYDRGPEFGVE 185
Query: 228 DVDLGDDTRFIEFYNLVFMQYNK-----KDDGS-LEPLKQKNIDTGLGLERIARILQKVP 281
+D R++E +NLVFMQY + KD+ L L KNIDTGLGLER+A ILQ V
Sbjct: 186 GGPAVNDERYVEIWNLVFMQYERGQGTGKDNFEILGDLPSKNIDTGLGLERLAMILQGVQ 245
Query: 282 NNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRG 341
N YE D +IKKA+EL V+Y ++ ++++L+++ DH+R L+ DGV P N GRG
Sbjct: 246 NMYEIDTSMAVIKKATELTGVAYGDAH-ASDVSLRVVTDHMRTATMLIGDGVTPGNEGRG 304
Query: 342 YVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEE 401
YV+RR++RRA+R RLLG G +L + + ++ EL T +RI +
Sbjct: 305 YVLRRIMRRAIRNMRLLGATGPVVKDLIDVVIGMMGQQYPELVTD--------RERIEKV 356
Query: 402 LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKE 461
EE F++TL+ G +LD A+S T+ +GS L G AFLL+DT+GFP+++T E
Sbjct: 357 ALAEENAFLKTLKAGTNILDT----AVSDTKAAGSTV-LPGDKAFLLHDTWGFPIDLTLE 411
Query: 462 VAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSA---DLAEKIPDTEFLGYDTL 518
+A E G+SVD GF M+ QR +++A A K + ++A+K+ +T+F+GY
Sbjct: 412 MAAEQGLSVDEDGFRRLMKEQRERAKADAQAKKTGHAGAGAYREIADKVGETDFIGYTDT 471
Query: 519 SAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAV 578
++ + +LV+G ++G +VE++L+RTPFYAE GGQIGD G + V G AV
Sbjct: 472 EGESTIVGILVDGASSPAATEGDEVEIVLDRTPFYAEGGGQIGDTGRIKVDSG-----AV 526
Query: 579 VEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKV 638
+E++D +K + V+VHKG ++ G + VG + A +D + R+ H+ATHL AL+
Sbjct: 527 IEIRDCQKPVPGVYVHKGVVQVGEVTVGAKAHASIDNRRRKAIARAHSATHLTHQALRDA 586
Query: 639 IGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAK 698
+G +QAGS R RFDF + + ++E+ IN + +Q +VM +D+AK
Sbjct: 587 LGPTAAQAGSENQPGRFRFDFGSPSAVPTAVMTDVEQKINEVLARDLDVQAEVMGIDEAK 646
Query: 699 RAGAIAMFGEKYGEQVKI 716
+ GAIA FGEKYGE+V++
Sbjct: 647 KQGAIAEFGEKYGERVRV 664
>gi|56460839|ref|YP_156120.1| alanyl-tRNA synthetase [Idiomarina loihiensis L2TR]
gi|81599943|sp|Q5QUV7.1|SYA_IDILO RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|56179849|gb|AAV82571.1| Alanyl-tRNA synthetase [Idiomarina loihiensis L2TR]
Length = 865
Score = 562 bits (1449), Expect = e-157, Method: Compositional matrix adjust.
Identities = 307/672 (45%), Positives = 439/672 (65%), Gaps = 42/672 (6%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR FL+++A RGH+ +PSAS++P DPT+L T AGM+ FK +FLG R+ +A ++QR
Sbjct: 8 IRDAFLNYFAERGHEKVPSASMIPGNDPTLLFTNAGMVPFKDVFLGTDKRRYDKATSAQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
C+R ND+ENVG T+RHHTFFEM+GNFSFGDYFKK+AIQ+AW+F T E LPA +LW
Sbjct: 68 CLRAGGKHNDLENVGYTARHHTFFEMMGNFSFGDYFKKQAIQYAWDFLTKELKLPAEKLW 127
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPD--RG 225
++V+ +DDEA++IW K++GVP + I R+G DNFW+ G TGPCGPCSE++YD + G
Sbjct: 128 VTVFTEDDEAYDIWVKDIGVPEDRISRIGEKDNFWSMGDTGPCGPCSEVFYDHGEEVWGG 187
Query: 226 CSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYE 285
D R+IE +NLVFMQYN++ DG+LEPL +IDTG+GLERI+ I+Q V +NYE
Sbjct: 188 PPGTPEEDGDRYIEIWNLVFMQYNRQADGTLEPLPDPSIDTGMGLERISAIMQNVHSNYE 247
Query: 286 TDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVR 345
DL +IK A+E+ +ND N +L++I DH+R+ +L++DGV PSN GRGYV+R
Sbjct: 248 IDLFQALIKAAAEIIG-----TNDLDNKSLRVIADHIRSCSFLITDGVMPSNEGRGYVLR 302
Query: 346 RLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKRE 405
R+IRRAVR G LLG K + F + E A ++ +++ ++Q I + L+RE
Sbjct: 303 RIIRRAVRHGHLLGAK-------DTFFFRLVDELARQMGEAY-PELEQKKQIIKDALERE 354
Query: 406 ELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEE 465
E +F +TLERG +L + + G+V + G F LYDT+GFPV++T ++A E
Sbjct: 355 EQQFARTLERGLAILSDEIGEL------KGNV--IPGDVVFKLYDTYGFPVDLTADIARE 406
Query: 466 HGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTLSAKAIVE 525
+++D +GF+ M Q Q A A + +D + L T F GYD + +A V
Sbjct: 407 QELTIDEQGFEQAMS---EQRQRAQQASQFGMDYNQQLKSD-NKTAFTGYDDVVGQAKVV 462
Query: 526 SLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVK 585
L +GKPV ++ G + V+L+ TPFYAESGGQIGD G L V G EV D
Sbjct: 463 ELFKDGKPVEQLQAGENGIVVLSETPFYAESGGQIGDKGVL-VANG-----PAFEVTDT- 515
Query: 586 KSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQ 645
+ +G H G + V ++ V+A +D + R+ K +H+ATHLL AAL+ ++G+ +Q
Sbjct: 516 QYIGKAIAHHGVAKAAV-KLSDSVKAEIDSERRENIKRNHSATHLLHAALRNLLGEHVTQ 574
Query: 646 AGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANL-LQTKVMALDDAKRAGAIA 704
GSLV D++RFDF+ P+ +L ++ER +N + ANL LQT++MA+D+AK AGA+A
Sbjct: 575 KGSLVEADKMRFDFSHFEPVTTEQLAQLEREVNAQV-RANLPLQTQLMAIDEAKEAGAMA 633
Query: 705 MFGEKYGEQVKI 716
+FGEKY EQV++
Sbjct: 634 LFGEKYDEQVRV 645
>gi|401679396|ref|ZP_10811327.1| alanine--tRNA ligase [Veillonella sp. ACP1]
gi|400219617|gb|EJO50481.1| alanine--tRNA ligase [Veillonella sp. ACP1]
Length = 872
Score = 562 bits (1449), Expect = e-157, Method: Compositional matrix adjust.
Identities = 308/676 (45%), Positives = 427/676 (63%), Gaps = 40/676 (5%)
Query: 50 GDSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
G+ +R+ +L F+ S+GH L S SL+PE DP++LL AGM KP F GK+ R T
Sbjct: 3 GNELRQAYLQFFESKGHLKLDSFSLIPENDPSLLLIGAGMAPLKPFFTGKLVPPCHRITT 62
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
SQ+C+RT D+ENVGRT+RHHTFFEMLGNFSFGDYFKK+AI WAWEF T L NRL++
Sbjct: 63 SQKCMRTGDLENVGRTARHHTFFEMLGNFSFGDYFKKDAIHWAWEFLTEVIKLDKNRLYV 122
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
+VY DD EA++ W+ + GV HI R+ +DNFW G GPCGP SEI++D P+ GC D
Sbjct: 123 TVYPDDQEAYDTWHNDCGVEESHITRL--EDNFWEIG-EGPCGPDSEIFFDQGPEHGCDD 179
Query: 229 VDLG---DDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYE 285
+ D R++E +NLVF Q+NK DGS EPL+ KNIDTG GLER+A +LQ N+E
Sbjct: 180 PNCAPGCDCDRYLEIWNLVFTQFNKMPDGSYEPLQHKNIDTGAGLERLASVLQHCKTNFE 239
Query: 286 TDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVR 345
TDLIFPII+ ++ A V Y + + T+++LK+I DH RA+ L+SDGV PSN GRGYV+R
Sbjct: 240 TDLIFPIIEATAKRAGVKYNE-DPNTDVSLKVIADHARAVTALISDGVLPSNEGRGYVLR 298
Query: 346 RLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKRE 405
R++RRAVR GRLLGI EG FL + + +++ + ++ + ++ E
Sbjct: 299 RILRRAVRHGRLLGI--------EGLFLTPLIDVVVDILGPGIKSIAEKQDFVKRVVQNE 350
Query: 406 ELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEE 465
E RF QTLE+G +LL+ ++ D L+ + + VP G + F LYDT+GFP E+T+E+A E
Sbjct: 351 EERFNQTLEQGLELLNSLI-DTLAAEKAT-VVP---GTEVFKLYDTYGFPWELTEEIASE 405
Query: 466 HGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTL--SAKAI 523
G ++D +GFD M+ QR +++ A V + A +A PD FL + L +
Sbjct: 406 RGFTIDHEGFDAAMKEQRERAREAR------VKEDAKVA--TPDITFLKDEELVENEAET 457
Query: 524 VESLLVNGKPVIKVSK---GSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVE 580
S+L+ GK ++ G ++ V++ TPF+AE GGQ+GD GF+ G VE
Sbjct: 458 ASSVLMLGKGSERLQTAVDGDEITVIVRTTPFHAEGGGQLGDTGFIVGPMGK------VE 511
Query: 581 VKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIG 640
V + K+ H GT+ EG + G +V VD R +HTATHLL AALK+V+G
Sbjct: 512 VHNTKRLPEGTVYHIGTVVEGSISEGDDVTLEVDTARRAAMARNHTATHLLHAALKRVLG 571
Query: 641 QETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRA 700
+ +QAGSLV D LRFDF P+ EL++IE L+N I A L M++D+AK
Sbjct: 572 EHVNQAGSLVTPDYLRFDFTHFSPVTQEELDQIEALVNEEILKATDLAIAEMSMDEAKAK 631
Query: 701 GAIAMFGEKYGEQVKI 716
GA+A+FG+KYG+ V++
Sbjct: 632 GAMALFGDKYGDVVRV 647
>gi|315125679|ref|YP_004067682.1| alanyl-tRNA synthetase [Pseudoalteromonas sp. SM9913]
gi|315014193|gb|ADT67531.1| alanyl-tRNA synthetase [Pseudoalteromonas sp. SM9913]
Length = 866
Score = 562 bits (1449), Expect = e-157, Method: Compositional matrix adjust.
Identities = 304/672 (45%), Positives = 427/672 (63%), Gaps = 42/672 (6%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR++FLDF+AS+ H+V+PS+SL+P D T+L AGM+QFK +FLG R RA +SQR
Sbjct: 9 IRQQFLDFFASKQHQVVPSSSLIPGNDATLLFNNAGMVQFKDVFLGAESRPYTRATSSQR 68
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI++AWEF T LP +L
Sbjct: 69 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAIKFAWEFLTEVVKLPKEKLL 128
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDF--HPDRG 225
+++Y DD+EAF W ++G+P + I R+ DNFW+ G TGPCGPCSEI+YD H G
Sbjct: 129 VTIYHDDEEAFGYWANDIGLPEDRIIRIATSDNFWSMGDTGPCGPCSEIFYDHGEHIWGG 188
Query: 226 CSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYE 285
D RFIE +NLVFMQYN++ DG++EPL ++++DTG+GLERI+ ILQ V +NYE
Sbjct: 189 PPGTPEEDGDRFIEIWNLVFMQYNRQSDGTMEPLPKQSVDTGMGLERISAILQGVHSNYE 248
Query: 286 TDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVR 345
DL +I A+ + N + D + +L+++ DH+R+ +L+SDGV PSN GRGYV+R
Sbjct: 249 IDLFQGLIAAAASVTN-----AQDMDDKSLRVVADHIRSCAFLISDGVMPSNEGRGYVLR 303
Query: 346 RLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKR- 404
R+IRRAVR G LG KG L A + + + EL A++Q I+E++ R
Sbjct: 304 RIIRRAVRHGNKLGAKGAFFYKLVAALIEQMGQAYPEL---------AKQQEIIEKVLRI 354
Query: 405 EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAE 464
EE +F +TLERG +L++ L+D +G V + G F LYDT+GFP ++T +VA
Sbjct: 355 EEEQFGKTLERGLAILEESLSDL------TGDV--IPGDLVFKLYDTYGFPADLTADVAR 406
Query: 465 EHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTLSAKAIV 524
E +++D +GF+ M QR+ +Q A K D + L T+F GYD+ V
Sbjct: 407 ERQMTIDHQGFEACMAVQRKTAQ---QAGKFGADYNDQLKSD-KHTDFKGYDSTHYSGTV 462
Query: 525 ESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDV 584
+ G+ V + G ++L+RTPFYAESGGQIGD G + V G T +
Sbjct: 463 VEIFAGGEAVSLLEDGQQGIIVLDRTPFYAESGGQIGDSGTITVAGGEFVVTNTTK---- 518
Query: 585 KKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETS 644
LG+ F H GT+ +G + V +V+A +D R K +HTATH+L AL++++G+ S
Sbjct: 519 ---LGNAFAHHGTV-QGRIGVNDKVDATIDDARRDSIKKNHTATHILHEALRQLLGEHVS 574
Query: 645 QAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIA 704
Q GSLV DRLRFDF+ + EL EIER++N I L T++MA+DDAK GA+A
Sbjct: 575 QKGSLVQPDRLRFDFSHFEAVTKQELREIERVVNDEIRRNFALNTELMAIDDAKAKGAMA 634
Query: 705 MFGEKYGEQVKI 716
+FGEKY ++V++
Sbjct: 635 LFGEKYDDEVRV 646
>gi|145220|gb|AAA03208.1| alanyl-tRNA synthetase [Escherichia coli]
Length = 876
Score = 562 bits (1449), Expect = e-157, Method: Compositional matrix adjust.
Identities = 310/689 (44%), Positives = 431/689 (62%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+S P DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSRYPITDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+ A NFW G TGPC PC+EI+Y
Sbjct: 128 LWVTVYESDDEAYEIWEKEVGIPRERIIRINDNKGAPYASGNFWRMGGTGPCDPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +I+ +++ + D +N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRTLIQAVAKVTGAT-----DLSNKSLRVIADHIRSCAFLIADGVMP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K F + I++ D+K ++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAKE--------TFFYKLVGPLIDVMGSAGEDLKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA------HNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGFGADYNAM-IRVDSA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD L V +L V+GK V ++ G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G N AV + + +++G H G + G L+VG V+A VD R R +++H+ATH
Sbjct: 513 KGANFSFAVEDTQKYGQAIG----HIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G S GSLV LRFDF+ + + E+ +E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVSHKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNTLIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M L+ AK GA+A+FGEKY E+V++ S
Sbjct: 629 NIMDLEAAKAKGAMALFGEKYDERVRVLS 657
>gi|340753659|ref|ZP_08690435.1| alanyl-tRNA synthetase [Fusobacterium sp. 2_1_31]
gi|340566829|gb|EEO38269.2| alanyl-tRNA synthetase [Fusobacterium sp. 2_1_31]
Length = 879
Score = 562 bits (1449), Expect = e-157, Method: Compositional matrix adjust.
Identities = 294/674 (43%), Positives = 431/674 (63%), Gaps = 35/674 (5%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
+G+ IR++F++F+ + HK SASL+P+DPT+LLT+AGM+ FKP FLG+ PR T
Sbjct: 15 TGNEIREKFIEFFMQKQHKHFESASLIPDDPTLLLTVAGMVPFKPYFLGQKEAPYPRVTT 74
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
Q+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFK+EAI W+WEF T L ++LW+
Sbjct: 75 YQKCIRTNDLENVGRTARHHTFFEMLGNFSFGDYFKEEAIAWSWEFVTEVLKLDKDKLWV 134
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYD----FHPDR 224
+V+ DDEA IW ++ P E I RMG +N+W++G TG CGPCSEI+ D + D
Sbjct: 135 TVFTTDDEAERIWIEKCNFPKERIVRMGESENWWSAGPTGSCGPCSEIHVDLGVQYGGDE 194
Query: 225 GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNY 284
D G D RFIE +NLVF ++N+ +DGSLEPL +KNIDTG GLERIA ++Q PNN+
Sbjct: 195 NSKIGDEGTDNRFIEIWNLVFTEWNRMEDGSLEPLPKKNIDTGAGLERIAAVVQGKPNNF 254
Query: 285 ETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVV 344
ETDL+FPI+++A+ + Y + N TN +LK+I DH RA+ +L++DGV PSN GRGY++
Sbjct: 255 ETDLLFPILEEAARITGSQYGK-NPETNFSLKVITDHARAVTFLVNDGVIPSNEGRGYIL 313
Query: 345 RRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKR 404
RR++RRAVR GRLLG K F+ + +K +E D+K + I + +K
Sbjct: 314 RRILRRAVRHGRLLGYK--------DLFMYKMVDKVVERFEVAYPDLKKNLENIRKIVKI 365
Query: 405 EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAE 464
EE +F TL++G +L++Q + + L+ + +L G+ +F LYDT+GFP E+T+E+AE
Sbjct: 366 EEEKFSNTLDQGIQLVNQEIDNLLANGKN-----KLDGEVSFKLYDTYGFPYELTEEIAE 420
Query: 465 EHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDS--ADLAEKIPDTEFLGYDTLSAKA 522
E GV+V + F+ +ME Q+ ++++A V DS D +K T+F GY+ +A
Sbjct: 421 ERGVTVLREEFEAKMEEQKEKARSAREVVMEKGQDSFIEDFYDKHGVTKFTGYEKTEDEA 480
Query: 523 IVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVK 582
+ S + +K ++ ++TPFYAESGGQ+GD G +Y N V++V+
Sbjct: 481 TLLS--------SREAKDGKYLLIFDKTPFYAESGGQVGDQGRIY---SDNFSAKVLDVQ 529
Query: 583 DVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQE 642
K +F+H I +G E + + V+ R +HTATHLL AL++V+G
Sbjct: 530 KQK----DIFIHTVEIEKGSAEENKTYKLEVNLLRRLDTAKNHTATHLLHKALREVVGTH 585
Query: 643 TSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGA 702
QAGSLV D+LRFDF+ + + +L +IE ++N I + + ++++AK GA
Sbjct: 586 VQQAGSLVDPDKLRFDFSHYEAVTAEQLAKIENIVNEKIREGIDVVVSHHSIEEAKNLGA 645
Query: 703 IAMFGEKYGEQVKI 716
+ +FG+KYGE V++
Sbjct: 646 MMLFGDKYGEVVRV 659
>gi|257792293|ref|YP_003182899.1| alanyl-tRNA synthetase [Eggerthella lenta DSM 2243]
gi|317490214|ref|ZP_07948702.1| alanyl-tRNA synthetase [Eggerthella sp. 1_3_56FAA]
gi|257476190|gb|ACV56510.1| alanyl-tRNA synthetase [Eggerthella lenta DSM 2243]
gi|316910708|gb|EFV32329.1| alanyl-tRNA synthetase [Eggerthella sp. 1_3_56FAA]
Length = 878
Score = 562 bits (1449), Expect = e-157, Method: Compositional matrix adjust.
Identities = 296/674 (43%), Positives = 422/674 (62%), Gaps = 34/674 (5%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATS--Q 110
IR+++L F+ +G K PS+SL+P+DP++LLT AGM+QFKP FL + + P T+ Q
Sbjct: 9 IREKYLSFFEEKGCKRWPSSSLIPDDPSLLLTSAGMVQFKPYFLQQKHLEAPYIGTTTVQ 68
Query: 111 RCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWISV 170
+C+RTND++ +G T RH +FFEMLGNFSFG+YFK+E WA+EFST GLPA RL+ +V
Sbjct: 69 KCVRTNDIDIIGTTGRHQSFFEMLGNFSFGEYFKEEMCAWAYEFSTEVLGLPAERLYFTV 128
Query: 171 YEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSDVD 230
Y DDDE EIW K++GVP +HI R+G DDNFW +G TGPCGPCSEIY+D D GC D
Sbjct: 129 YLDDDETIEIW-KKLGVPDDHISRLGEDDNFWRAGPTGPCGPCSEIYFDQGEDFGCGSPD 187
Query: 231 LG---DDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETD 287
D RF+E++NLVF QY+ ++DG+ PL +KNIDTG+GLERIA ILQ V +NYETD
Sbjct: 188 CAPGCDCDRFLEYWNLVFTQYDGQEDGTFVPLPKKNIDTGMGLERIAAILQGVQSNYETD 247
Query: 288 LIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRL 347
++ ++ +L +Y + + +L+L+I+ DH RA+ ++++DG+ PSN GRGYV+RRL
Sbjct: 248 VLRSLVAVGEKLTGTTYGE-DAAIDLSLRIMADHSRAVAFMIADGILPSNEGRGYVLRRL 306
Query: 348 IRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREEL 407
+RRAV G LLG L+ FL ++ + L H+ ++ + + EE
Sbjct: 307 LRRAVMKGHLLG--------LDKPFLNDYVDEIVNLMGHVYPEIVENRELTRRVILSEEE 358
Query: 408 RFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHG 467
RF L +G LD+ LA+ G V L G AF L+DT+GFPVE+T+E+ +E G
Sbjct: 359 RFGSNLRQGRAFLDEALAEL------EGEV--LPGDRAFTLHDTYGFPVEVTRELCDERG 410
Query: 468 VSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDS-----ADLAEKIPDTEFLGYDTLSAKA 522
+ VDM+GF M+ QR +++AA+ + + ++ E + TEFLGY A+A
Sbjct: 411 IEVDMEGFGRCMDEQRERARAANTKDAEAAWSTYGGVMNEILEAVGPTEFLGYTKNDAEA 470
Query: 523 IVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVK 582
V +L+ +G V + G + V+L+ TPFYAE GGQIGD G L + A+V V
Sbjct: 471 RVLALVKDGVQVDVLEAGDEGRVVLDATPFYAEKGGQIGDAGVL------AKDDAIVAVL 524
Query: 583 DVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQE 642
D K+ + H + G L G V A +D R+R + +HTATH+L AL++V+G
Sbjct: 525 DTKEPEKGLIAHTVKVESGRLSAGDAVHAAIDVPRRERIRRNHTATHILHWALREVLGDH 584
Query: 643 TSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGA 702
QAGS VA RLRFDF + ++ E+ERL N I + + ++ +L A+ AG
Sbjct: 585 VKQAGSYVADSRLRFDFTHFEAMTAEQIAEVERLANQKIMENHPVRAYETSLASAREAGV 644
Query: 703 IAMFGEKYGEQVKI 716
+A+FGEKYGE V++
Sbjct: 645 MALFGEKYGEFVRV 658
>gi|170732737|ref|YP_001764684.1| alanyl-tRNA synthetase [Burkholderia cenocepacia MC0-3]
gi|205830047|sp|B1K026.1|SYA_BURCC RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|169815979|gb|ACA90562.1| alanyl-tRNA synthetase [Burkholderia cenocepacia MC0-3]
Length = 874
Score = 562 bits (1449), Expect = e-157, Method: Compositional matrix adjust.
Identities = 304/679 (44%), Positives = 428/679 (63%), Gaps = 44/679 (6%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR++FL F+ S+GH ++ S+SLVP DPT++ T +GM+QFK +FLG PR RA T+QR
Sbjct: 6 IREKFLKFFESKGHTIVRSSSLVPGNDPTLMFTNSGMVQFKDVFLGTDPRPYSRATTAQR 65
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AI++AWE T + LP ++LW
Sbjct: 66 SVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIKFAWELLTTVYQLPKDKLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYYDF 220
++VY++DDEA++IW KEVGVP E I R+G A DNFW G TGPCGPC+EI+YD
Sbjct: 126 VTVYQEDDEAYDIWAKEVGVPTERIIRIGDNKGARYASDNFWTMGDTGPCGPCTEIFYDH 185
Query: 221 HPD--RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQ 278
PD G D R+IE +NLVFMQ+N+ G++ L ++++DTG+GLER+A +LQ
Sbjct: 186 GPDVWGGPPGSPEEDGDRYIEIWNLVFMQFNRDAQGNMTRLPKQSVDTGMGLERLAAVLQ 245
Query: 279 KVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNI 338
V +NYE DL +IK A+ + +S D TN +LK+I DH+RA +L+ DGV P N
Sbjct: 246 HVHSNYEIDLFQNLIKAAARVTEIS-----DLTNNSLKVIADHIRACSFLIVDGVIPGNE 300
Query: 339 GRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRI 398
GRGYV+RR++RRA+R G LG KG F +A+ E+ T ++K EQR+
Sbjct: 301 GRGYVLRRIVRRAIRHGYKLGRKG-------AFFHKLVADLVAEMGTAY-PELKEAEQRV 352
Query: 399 LEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEI 458
+ L++EE RF +T+E G +L+ LAD ++ G V L G+ AF L+DT+GFP+++
Sbjct: 353 TDVLRQEEERFFETIEHGMSILEAALADVEAK---GGKV--LDGELAFKLHDTYGFPLDL 407
Query: 459 TKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTL 518
T +V E G++VD FD M QR Q++AA + L T F GY+ +
Sbjct: 408 TADVCRERGMTVDEPAFDDAMARQREQARAAGK-----FKATQGLEYSGAKTTFHGYEEI 462
Query: 519 S-AKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTA 577
+ A V +L V+G V +V G D V+L+ TPFYAESGGQ+GD G L N T
Sbjct: 463 AFDDAKVVALYVDGSAVNEVKAGQDAVVVLDHTPFYAESGGQVGDQGVL-----ANAATR 517
Query: 578 VVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKK 637
V D K V H GT+ +G L+VG + A +D + R R + +H+ATHL+ AL++
Sbjct: 518 FA-VADTLKVQADVIGHHGTLEQGTLKVGDVLRAEIDAQRRARTQRNHSATHLMHKALRE 576
Query: 638 VIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDA 697
V+G Q GSLV D+ RFDF + P+ D E+ +E+++N I +VM D+A
Sbjct: 577 VLGAHVQQKGSLVDADKTRFDFAHNAPMTDDEIRRVEQIVNDEILANAPGIVRVMPYDEA 636
Query: 698 KRAGAIAMFGEKYGEQVKI 716
+ GA+A+FGEKYG++V++
Sbjct: 637 VKGGAMALFGEKYGDEVRV 655
>gi|86146326|ref|ZP_01064650.1| alanyl-tRNA synthetase [Vibrio sp. MED222]
gi|85835805|gb|EAQ53939.1| alanyl-tRNA synthetase [Vibrio sp. MED222]
Length = 860
Score = 562 bits (1448), Expect = e-157, Method: Compositional matrix adjust.
Identities = 306/687 (44%), Positives = 430/687 (62%), Gaps = 51/687 (7%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S D +R FL F+ S+ H+++ S+SLVP DPT+L T AGM QFK FLG R RA
Sbjct: 4 STDEVRNAFLKFFESKEHQIVDSSSLVPHNDPTLLFTNAGMNQFKDCFLGAEKRAYTRAT 63
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
T+QRC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK+EAI +AWEF T GLP
Sbjct: 64 TAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEEAIGFAWEFLTETLGLPK 123
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG--------ADDNFWNSGATGPCGPCSE 215
+RL ++VYE DDEAFEIWNK+VG+P + I R+G DNFW G TGPCGPC+E
Sbjct: 124 DRLLVTVYETDDEAFEIWNKKVGIPADKIVRIGDKEGGKKFESDNFWTMGDTGPCGPCTE 183
Query: 216 IYYDF--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERI 273
I+YD H G D RFIE +N VFMQ+N+ DG++EPL + +DTG+G+ERI
Sbjct: 184 IFYDHGEHIWGGRPGTPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPAVDTGMGIERI 243
Query: 274 ARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGV 333
+ I+Q V +NYE D+ +IK +E+ +D +N +L++I DH+R+ +L++DGV
Sbjct: 244 SAIMQGVHSNYEIDVFQKLIKATAEVVG-----HDDLSNQSLRVIADHIRSCSFLIADGV 298
Query: 334 FPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKA 393
PSN GRGYV+RR+IRRAVR G +G +G L G + A EL
Sbjct: 299 MPSNEGRGYVLRRIIRRAVRHGNKIGAQGVFFHKLVGVLAEVMGSAADELK--------- 349
Query: 394 REQRILEELKR-EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTF 452
++Q ++E++ R EE F +TLERG +L+ L DAL L G+ F LYDT+
Sbjct: 350 KQQELVEKVLRIEEENFGRTLERGMVILNDAL-DALEG-------KELDGETVFKLYDTY 401
Query: 453 GFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKI-PDTE 511
GFP ++T +VA E ++D +GF+ ME QR++ A A + D +A + K+ +TE
Sbjct: 402 GFPADLTNDVARERDFTIDEEGFEKAMEAQRKR---AREAGQFGTDYNATI--KVDTNTE 456
Query: 512 FLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQG 571
F GY + +L V+G+ V +S G ++L TPFYAESGGQ GD G L G
Sbjct: 457 FCGYTGTEGAGEISALFVDGEEVSSLSAGDKAIIILEETPFYAESGGQCGDAGTLKTASG 516
Query: 572 TNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLL 631
+ +V+D +K LG+ F H G + EGV G +VEA VD + R ++H+ATHLL
Sbjct: 517 ------LFKVQDTQK-LGNAFAHHGELVEGVFAQGDKVEATVDAERRAAISLNHSATHLL 569
Query: 632 QAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKV 691
+AL++V+G+ +Q GSLV D LRFDF+ + +++E+ERL+N + ++++T +
Sbjct: 570 HSALREVLGEHVAQKGSLVKPDNLRFDFSNLEAVTPAQIKEVERLVNAQVRKNHVIETNI 629
Query: 692 MALDDAKRAGAIAMFGEKYGEQVKISS 718
M ++ AK GA+A+FGEKY ++V++ S
Sbjct: 630 MDIESAKEKGAMALFGEKYDDEVRVLS 656
>gi|381394729|ref|ZP_09920441.1| alanyl-tRNA synthetase [Glaciecola punicea DSM 14233 = ACAM 611]
gi|379329696|dbj|GAB55574.1| alanyl-tRNA synthetase [Glaciecola punicea DSM 14233 = ACAM 611]
Length = 870
Score = 562 bits (1448), Expect = e-157, Method: Compositional matrix adjust.
Identities = 309/678 (45%), Positives = 436/678 (64%), Gaps = 51/678 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+AS+ H+ + ++SLVP +DPT+L T AGM QFK +FLG R RA +SQR
Sbjct: 8 IRRAFLDFFASKQHQEVATSSLVPVDDPTLLFTNAGMNQFKDVFLGTEQRNYTRATSSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AIQ+AW+F T+E GL +L
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQQAIQYAWDFLTIELGLAKEKLL 127
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDR--- 224
++VY DDDEAF+IW K++GVP + I R+ DNFW+ G TGPCGPCSEI+YD H +
Sbjct: 128 VTVYHDDDEAFDIWEKQIGVPKDRIIRIATSDNFWSMGDTGPCGPCSEIFYD-HGEHIWG 186
Query: 225 ---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVP 281
G D D GD RFIE +NLVFMQYN++ +G + L + +IDTG+GLER++ I+Q V
Sbjct: 187 GPPGSPDED-GD--RFIEIWNLVFMQYNRQANGDMLALPKPSIDTGMGLERVSAIMQNVH 243
Query: 282 NNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRG 341
+NYE DL +IK A+ + S D + +L++I DH+R+ +L+ DGV PSN GRG
Sbjct: 244 SNYEIDLFQALIKAAAVIVGTS-----DLEDKSLRVIADHIRSCSFLICDGVIPSNEGRG 298
Query: 342 YVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEE 401
YV+RR+IRRAVR G LG K F + ++ + H ++ ++ I++
Sbjct: 299 YVLRRIIRRAVRHGNKLGAK--------DVFFYKLVDELVNQMAHAFPELAQQQLMIVKV 350
Query: 402 LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKE 461
LK EE +F TLERG +L+ LA ++ VP G+ F LYDTFGFP ++T +
Sbjct: 351 LKAEEEQFSATLERGMGILNDSLAKLTTKV-----VP---GELVFKLYDTFGFPADLTND 402
Query: 462 VAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTLSAK 521
VA E ++D GF++ M+ Q+ +Q+A K S D + ++ + +T F GY LSA
Sbjct: 403 VAREQDFTIDEAGFNLSMQAQKALAQSAS---KFSADYN-NIIKLDHETMFTGYGELSAS 458
Query: 522 AIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEV 581
A V +LLV+ V + + G DV V+L+ TPFYAESGGQ GD G L V +
Sbjct: 459 ATVTALLVDQVSVQEAASG-DVLVVLDTTPFYAESGGQTGDTGTLGFA------NVSVNI 511
Query: 582 KDVKKSLGSVFVHKGTIREGV---LEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKV 638
D +K +G+ FVHK ++++ V L+VG V VD R+ K++H+ATHLL AAL+ +
Sbjct: 512 LDTQK-VGTAFVHKVSLKDSVDSTLKVGDTVMVTVDYARREAIKLNHSATHLLHAALRNI 570
Query: 639 IGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAK 698
+G+ +Q GSLV D+LRFDF+ + T++ IE +N I + L TK+M L+ AK
Sbjct: 571 LGEHVTQKGSLVDADKLRFDFSHFEGISVTKVVAIENSVNQQIRANHALSTKLMELEQAK 630
Query: 699 RAGAIAMFGEKYGEQVKI 716
+AGA+A+FGEKY ++V++
Sbjct: 631 QAGAMALFGEKYDDEVRV 648
>gi|429760147|ref|ZP_19292637.1| alanine--tRNA ligase [Veillonella atypica KON]
gi|429178552|gb|EKY19830.1| alanine--tRNA ligase [Veillonella atypica KON]
Length = 872
Score = 562 bits (1448), Expect = e-157, Method: Compositional matrix adjust.
Identities = 307/676 (45%), Positives = 427/676 (63%), Gaps = 40/676 (5%)
Query: 50 GDSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
G+ +R+ +L F+ S+GH L S SL+PE DP++LL AGM KP F GK+ R T
Sbjct: 3 GNELRQAYLQFFESKGHLKLDSFSLIPENDPSLLLIGAGMAPLKPFFTGKLVPPCHRITT 62
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
SQ+C+RT D+ENVGRT+RHHTFFEMLGNFSFGDYFKK+AI WAWEF T L NRL++
Sbjct: 63 SQKCMRTGDLENVGRTARHHTFFEMLGNFSFGDYFKKDAIHWAWEFLTEVIKLDKNRLYV 122
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
+VY DD EA++ W+ + GV HI R+ +DNFW G GPCGP SEI++D P+ GC D
Sbjct: 123 TVYPDDQEAYDTWHNDCGVEESHITRL--EDNFWEIG-EGPCGPDSEIFFDQGPEHGCDD 179
Query: 229 VDLG---DDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYE 285
+ D R++E +NLVF Q+NK DGS EPL+ KNIDTG GLER+A +LQ N+E
Sbjct: 180 PNCAPGCDCDRYLEIWNLVFTQFNKMPDGSYEPLQHKNIDTGAGLERLASVLQHCKTNFE 239
Query: 286 TDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVR 345
TDLIFPII+ ++ A V Y + + T+++LK+I DH RA+ L+SDGV PSN GRGYV+R
Sbjct: 240 TDLIFPIIEATAKRAGVKYNE-DPNTDVSLKVIADHARAVTALISDGVLPSNEGRGYVLR 298
Query: 346 RLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKRE 405
R++RRAVR GRLLGI EG FL + + +++ + ++ + ++ E
Sbjct: 299 RILRRAVRHGRLLGI--------EGLFLTPLIDVVVDILGPGIKSIAEKQDFVKRVVQNE 350
Query: 406 ELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEE 465
E RF QTLE+G +LL+ ++ D L+ + + VP G + F LYDT+GFP E+T+E+A E
Sbjct: 351 EERFNQTLEQGLELLNSLI-DTLAAEKAT-VVP---GTEVFKLYDTYGFPWELTEEIASE 405
Query: 466 HGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTL--SAKAI 523
G ++D +GFD M+ QR +++ A V + A +A PD FL + L +
Sbjct: 406 RGFTIDHEGFDAAMKEQRERAREAR------VKEDAKVA--TPDITFLKDEELVENEAET 457
Query: 524 VESLLVNGKPVIKVSK---GSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVE 580
S+L+ GK ++ G ++ V++ TPF+AE GGQ+GD GF+ G VE
Sbjct: 458 ASSVLMLGKGSERLQTAVDGDEITVIVRTTPFHAEGGGQLGDTGFIVGPMGK------VE 511
Query: 581 VKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIG 640
+ + K+ H GT+ EG + G +V VD R +HTATHLL AALK+V+G
Sbjct: 512 IHNTKRLPEGTVYHIGTVVEGSISEGDDVTLEVDTARRAAMARNHTATHLLHAALKRVLG 571
Query: 641 QETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRA 700
+ +QAGSLV D LRFDF P+ EL++IE L+N I A L M++D+AK
Sbjct: 572 EHVNQAGSLVTPDYLRFDFTHFSPVTQEELDQIEALVNEEILKATDLAIAEMSMDEAKAK 631
Query: 701 GAIAMFGEKYGEQVKI 716
GA+A+FG+KYG+ V++
Sbjct: 632 GAMALFGDKYGDVVRV 647
>gi|400754396|ref|YP_006562764.1| alanyl-tRNA synthetase AlaS [Phaeobacter gallaeciensis 2.10]
gi|398653549|gb|AFO87519.1| alanyl-tRNA synthetase AlaS [Phaeobacter gallaeciensis 2.10]
Length = 883
Score = 562 bits (1448), Expect = e-157, Method: Compositional matrix adjust.
Identities = 310/683 (45%), Positives = 437/683 (63%), Gaps = 47/683 (6%)
Query: 51 DSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATS 109
+ IR FL+++A +GH+++ S+ LVP DPT++ +GM+QFK F G R RA TS
Sbjct: 5 NDIRSTFLNYFAKQGHEIVSSSPLVPRNDPTLMFANSGMVQFKNCFTGVETRDYKRATTS 64
Query: 110 QRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANR 165
Q+C+R ND++NVG T+RHHTFFEMLGNFSFGDYFK+EAI +AWE T EFG+ +R
Sbjct: 65 QKCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKEEAIPFAWELITKEFGIDKSR 124
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDR- 224
L +VY DDEAFEIW K+VGVP + I R+ DNFW G TGPCGPC+EI+YD H D
Sbjct: 125 LLTTVYHTDDEAFEIW-KKVGVPEDRIIRIDTSDNFWQMGPTGPCGPCTEIFYD-HGDHI 182
Query: 225 -----GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQK 279
G +D D GD RFIE +N+VFMQ + +DG+++ L ++IDTG+GLERI +LQ
Sbjct: 183 WGGPPGSADED-GD--RFIEIWNVVFMQNEQFEDGTMKALDMQSIDTGMGLERIGALLQG 239
Query: 280 VPNNYETDLIFPIIKKASELANVS-YAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNI 338
+NY+TDL +I+ ++++ NV Y N++ ++I DHLR+ +L++DGV PSN
Sbjct: 240 SHDNYDTDLFKALIEASADVTNVDPYGDQ----NVHHRVIADHLRSTSFLMADGVMPSND 295
Query: 339 GRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRI 398
GRGYV+RR++RRA+R LLG K L A + + EL R Q +
Sbjct: 296 GRGYVLRRIMRRAMRHAHLLGAKDPVMHRLVPALVQQMGAAYPEL---------GRAQPM 346
Query: 399 LEE-LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVE 457
+EE L +EE RF QTL+RG KLLD D L+ E +P G AF LYDTFGFP++
Sbjct: 347 IEETLHQEETRFKQTLDRGLKLLD----DELAGLDEGAPLP---GAAAFKLYDTFGFPLD 399
Query: 458 ITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSA--DLAEKIPDTEFLGY 515
+T++ E G +VD GFD M Q+ +++AA + S D + D+A++ T+FLGY
Sbjct: 400 LTQDALREKGRTVDTDGFDSAMAEQKAKARAAWSGSGESADSTIWFDVADQAGTTDFLGY 459
Query: 516 DTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
+T +A+ + +LLV+G V + G+DV+V+LN+TPFYAESGGQ+GD G + V G
Sbjct: 460 ETEAAEGQIMALLVDGAQVAEAGVGTDVQVVLNQTPFYAESGGQVGDSGEIRVDGG---- 515
Query: 576 TAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAAL 635
VV V D KK+ G VF+H G + G++ G + VD R + +H+ATHLL AL
Sbjct: 516 --VVRVTDTKKAAG-VFIHFGKVESGMITKGAAAQLEVDHLRRSAIRANHSATHLLHEAL 572
Query: 636 KKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALD 695
++ +G +Q GSL A DRLRFDF+ ++ L EL + +N +I +++T++M D
Sbjct: 573 REALGDHVAQRGSLNADDRLRFDFSHNKALSAEELRRVAVDVNRFIRQNTVVETRIMTPD 632
Query: 696 DAKRAGAIAMFGEKYGEQVKISS 718
DA+ GA A+FGEKYG++V++ S
Sbjct: 633 DARALGAQALFGEKYGDEVRVVS 655
>gi|403379210|ref|ZP_10921267.1| alanyl-tRNA synthetase [Paenibacillus sp. JC66]
Length = 875
Score = 562 bits (1448), Expect = e-157, Method: Compositional matrix adjust.
Identities = 302/675 (44%), Positives = 428/675 (63%), Gaps = 37/675 (5%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+++LDF+AS+GHK+ PS+SLVP DP++L AGM KP F G+V PR A +Q+
Sbjct: 6 IRRKWLDFFASKGHKIEPSSSLVPHNDPSLLWINAGMAPLKPYFDGRVKPDNPRIANAQK 65
Query: 112 CIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANRLWIS 169
CIRTND+E VG+T RHHT FEMLGNFS GDYFK+EAI WAWEF T + G +RL ++
Sbjct: 66 CIRTNDIEVVGKTRRHHTMFEMLGNFSIGDYFKEEAITWAWEFLTGKEWIGFDPDRLSVT 125
Query: 170 VYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSDV 229
VY++DDEA+ +W++++G+P E I ++G DDNFW+ G GPCGPC+EI+Y DRG +
Sbjct: 126 VYKEDDEAYRLWSEKIGIPKERIYQLG-DDNFWDIG-EGPCGPCTEIFY----DRGDAYG 179
Query: 230 DL--------GDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVP 281
DL G++ RF+E +NLVF Q+N DGS PL KNIDTG GLER A ILQ V
Sbjct: 180 DLNDPECWPGGENERFLEVWNLVFSQFNHNKDGSYTPLPNKNIDTGAGLERFASILQNVD 239
Query: 282 NNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRG 341
+N++TDL PII++ + V+Y S ++ ++ +K+I DH+R +V+ + DGV PSN GRG
Sbjct: 240 SNFDTDLFVPIIERICSITGVAYKSSQEQ-DVAIKVIADHIRTVVFAVGDGVLPSNEGRG 298
Query: 342 YVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEE 401
Y++RRL+RRAVR G++LG ++ FL + ++ ++V +++ I +
Sbjct: 299 YIIRRLLRRAVRYGKVLG--------MDKPFLHELTAVVAKVMGDYYTEVAEKQEFIAKV 350
Query: 402 LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKE 461
++ EE RF +TL G +L M+ A S + +SG DAF LYDT+GFP ++T++
Sbjct: 351 IRTEEERFYETLSDGLAILSAMVEQAKSAGKHE-----ISGSDAFKLYDTYGFPFDLTED 405
Query: 462 VAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTLSAK 521
A+E G++VD GFD M+ QR +++AA + L+E +EF+GY+ L
Sbjct: 406 FAKEQGLTVDQDGFDKAMQEQRNRARAARQDTESMKVQGGPLSELTVKSEFVGYNELVTT 465
Query: 522 AIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEV 581
A V +L G+ + +G +V+L+RTPFYAESGGQ+ D G L G + AV EV
Sbjct: 466 AKVVALFAEGEAAEQCGEGQRCQVVLDRTPFYAESGGQVSDTGELI---GGGVKAAVEEV 522
Query: 582 KDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQ 641
+ V I EG L++ VEA VD RQ +HTATHLL ALK V+G
Sbjct: 523 SKAPNGQHVLLV---LITEGTLKLNDNVEAAVDRIKRQDIIKNHTATHLLHRALKDVLGD 579
Query: 642 ETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAG 701
+QAGSLVA +RLRFDF+ + + EL++IE +N I + +L M +D+AK G
Sbjct: 580 HVNQAGSLVAPERLRFDFSHFGAISEEELQDIEYRVNQQIWNRTMLDISSMPIDEAKAMG 639
Query: 702 AIAMFGEKYGEQVKI 716
A+A+FGEKYGE V++
Sbjct: 640 AMALFGEKYGEVVRV 654
>gi|401764933|ref|YP_006579940.1| alanyl-tRNA ligase [Enterobacter cloacae subsp. cloacae ENHKU01]
gi|400176467|gb|AFP71316.1| alanyl-tRNA ligase [Enterobacter cloacae subsp. cloacae ENHKU01]
Length = 875
Score = 562 bits (1448), Expect = e-157, Method: Compositional matrix adjust.
Identities = 319/689 (46%), Positives = 436/689 (63%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQYAWELLTGENWFNLPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NYE DL +IK +E+ + D N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYEIDLFSTLIKAVAEVTGAT-----DLNNKSLRVIADHIRSCAFLIADGVIP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRA+R G +LG K L G + + EL K ++
Sbjct: 302 SNENRGYVLRRIIRRAIRHGNMLGAKDTFFYKLVGPLIGVMGAAGDEL--------KRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLKGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQ------AAHNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEVGFEAAMEEQRRRARESSGFGADYNAM-IRVDSA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD L V +L V+GK V +S G D V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDALELTGKVTALFVDGKAVDSISAGQDAVVILDKTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G +V + + +++G H+G + G L+VG V+A VD R R +++H+ATH
Sbjct: 513 KGNGFSFSVSDTQKFGQAIG----HQGKLVSGSLKVGEGVQANVDEARRARIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL+ V+G +Q GSLV LRFDF+ + +E+ +E L+N I ++T
Sbjct: 569 LMHAALRDVLGTHVAQKGSLVNDKVLRFDFSHFEAMKPSEIRAVEDLVNAQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M L+DAK+ GA+A+FGEKY E+V++ S
Sbjct: 629 HIMDLEDAKKKGAMALFGEKYDERVRVLS 657
>gi|328950125|ref|YP_004367460.1| alanyl-tRNA synthetase [Marinithermus hydrothermalis DSM 14884]
gi|328450449|gb|AEB11350.1| alanyl-tRNA synthetase [Marinithermus hydrothermalis DSM 14884]
Length = 896
Score = 561 bits (1447), Expect = e-157, Method: Compositional matrix adjust.
Identities = 321/691 (46%), Positives = 425/691 (61%), Gaps = 50/691 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPED-PTVLLTIAGMLQFKPIFLGKVP------RQVPR 105
IR+++L F+ S+GH LPS SL+PED PT+L T+AGM KP FLG P + R
Sbjct: 6 IREKYLKFFESKGHLALPSFSLIPEDDPTLLFTVAGMAPLKPYFLGARPVFPGHEGEHRR 65
Query: 106 AATSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPA 163
T Q+C+R D+ENVGRT+RH+TFFEMLGNFSFGDYFK+EAI WAWEF T GL
Sbjct: 66 VVTCQKCLRVGDIENVGRTARHNTFFEMLGNFSFGDYFKREAILWAWEFLTSPEWLGLDP 125
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFW-----NSGATGPCGPCSEIYY 218
+RL+++V+EDDDEA+ IW EVGVP E I R G D+NFW + G GPCGPCSEI+Y
Sbjct: 126 DRLYVTVFEDDDEAYRIWRDEVGVPEERIGRFGEDENFWPANAISQGPNGPCGPCSEIFY 185
Query: 219 DFHPDRGCSD---VDLGDDTRFIEFYNLVFMQYNKK----DDGSLEPLKQKNIDTGLGLE 271
D P G +D + G RF+E +NLVF QYN+ G LEPL Q+NIDTG+GL
Sbjct: 186 DRGPGFGSADETGPNTGSGDRFVEVWNLVFTQYNRTGPVPGPGQLEPLPQRNIDTGMGLY 245
Query: 272 RIARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSD 331
R+A ILQ V + Y+TD PII + EL+ Y + +++ ++I DH+RA+V LSD
Sbjct: 246 RVAAILQDVQDFYDTDTFRPIIDRVVELSGRPYEGA---ASVSHRVIADHVRAVVAALSD 302
Query: 332 GVFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDV 391
G SN GRGYV+RRL+RRAVR G LLG+ R P +AE + + ++
Sbjct: 303 GAVFSNTGRGYVIRRLLRRAVRHGYLLGL----REPFMYRLAPVVAEVLGDYYPEMRDNL 358
Query: 392 KAREQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDT 451
A E+ I + EE RF+ TLE G + L+ +L G V LSG++AF LYDT
Sbjct: 359 PATEKAI----RLEEERFLTTLESGIRRLEDLLQGI-----PQGGV--LSGEEAFRLYDT 407
Query: 452 FGFPVEITKEVAEEHGVSVDMKGFDIEMENQR---RQSQAAHNAVKLSVDDSAD-LAEKI 507
+GFP ++T E+A E GV VD +GF+ M Q+ R++ A V + ++ D L
Sbjct: 408 YGFPWDLTVEIAAERGVRVDREGFERAMARQQERARKASAFTGEVFVKSAEALDTLVAAR 467
Query: 508 PDTEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLY 567
TEF GY TL + V +L + + G +V+V+L+RTPFYAE GGQIGD+G+L
Sbjct: 468 GATEFTGYTTLEDEGEVLLILEGEAELERAEAGREVQVVLDRTPFYAEGGGQIGDFGYLE 527
Query: 568 VTQGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTA 627
G + V +KS + +H+ + EGVLE GR V A+VDP R+ + +HTA
Sbjct: 528 WAGGRAR------VVTTRKSPQGIHLHQVRVEEGVLEPGRRVRAVVDPA-RRATERNHTA 580
Query: 628 THLLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLL 687
THLL AAL+ V+G QAGSLVA DRLRFDF PL ELE IERL+N W+ +
Sbjct: 581 THLLHAALRAVLGPHVRQAGSLVAPDRLRFDFTHPEPLSLEELERIERLVNRWVQADFPV 640
Query: 688 QTKVMALDDAKRAGAIAMFGEKYGEQVKISS 718
L++AKR GA+A+FGEKY + V++ S
Sbjct: 641 TWTYKPLEEAKREGAMALFGEKYADVVRVVS 671
>gi|387127525|ref|YP_006296130.1| alanyl-tRNA synthetase [Methylophaga sp. JAM1]
gi|386274587|gb|AFI84485.1| Alanyl-tRNA synthetase [Methylophaga sp. JAM1]
Length = 867
Score = 561 bits (1447), Expect = e-157, Method: Compositional matrix adjust.
Identities = 302/677 (44%), Positives = 439/677 (64%), Gaps = 47/677 (6%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
+RK FLDF+A +GH+V+ S+ L+P DPT+L T AGM+QFK +FLG+ R+ RA T+QR
Sbjct: 7 LRKLFLDFFADKGHEVVSSSPLIPANDPTLLFTNAGMVQFKEVFLGQETRKYTRATTTQR 66
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK+EAIQ+AWEF T LPA +LW
Sbjct: 67 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKREAIQYAWEFLTETLQLPAEKLW 126
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPD--RG 225
I+V+E+DDEA +IW KE+GV R+GA DNFW+ G TGPCGPCSEI+YD P+ G
Sbjct: 127 ITVFEEDDEAADIWLKEIGVDASRFSRIGAKDNFWSMGDTGPCGPCSEIFYDHGPEVAGG 186
Query: 226 CSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYE 285
D R+IE +NLVFMQ+++ DG+L PL + ++DTG+GLER+A +LQ NNY+
Sbjct: 187 PPGTPEEDGDRYIEIWNLVFMQFDRSADGTLTPLPKPSVDTGMGLERLAAVLQHKHNNYD 246
Query: 286 TDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVR 345
DL +IK +L+ + D +N +L++I DH+R+ ++++DGV PSN GRGYV+R
Sbjct: 247 IDLFQNLIKAIQKLSGTT-----DSSNTSLRVIADHIRSCAFMITDGVQPSNEGRGYVLR 301
Query: 346 RLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEE-LKR 404
R+IRRA+R G LG+K L + + E EL+ + Q ++E+ L+
Sbjct: 302 RIIRRAIRHGHKLGLKEAFFYKLVQPLVDEMGEAFPELT---------KAQPVVEQALQI 352
Query: 405 EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAE 464
EE RF TL+ G K+LD + + + + G+ FLLYDT+GFP+++T ++A
Sbjct: 353 EEERFADTLDNGLKILDHAIEEMGDK--------EIPGETIFLLYDTYGFPIDLTADIAR 404
Query: 465 EHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKI---PDTEFLGYDTLSAK 521
E G+++D+ GF+ ME QR ++++A L+E + +T F GYD + +
Sbjct: 405 ERGLTIDVAGFERHMEAQRNRARSASQF-------GGGLSETLIIDGETVFCGYDHMRNE 457
Query: 522 AIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEV 581
++ +LLV+G+ V K+ G ++L+ TPFYAESGGQ+GD G + N A V
Sbjct: 458 GVITALLVDGENVDKLHAGQQGIIVLDHTPFYAESGGQVGDQGEI------NTAGAHFIV 511
Query: 582 KDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQ 641
KD +K G F H G ++G EVG+ V A VD RQ ++H+ATHLL AAL+ V+G+
Sbjct: 512 KDTRKQ-GKAFTHIGECKDGTFEVGQPVIAHVDEYNRQATALNHSATHLLHAALRNVLGE 570
Query: 642 ETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAG 701
+Q GSLV RLRFDF+ P+ +L EIER++N I + ++T++M ++ A+++G
Sbjct: 571 HVTQKGSLVDSQRLRFDFSHFEPVTADQLREIERMVNQHIRVNHAVETRLMPIEKARQSG 630
Query: 702 AIAMFGEKYGEQVKISS 718
A+A+FGEKY ++V++ S
Sbjct: 631 AMALFGEKYDDEVRVLS 647
>gi|423685250|ref|ZP_17660058.1| alanyl-tRNA synthetase [Vibrio fischeri SR5]
gi|371495751|gb|EHN71346.1| alanyl-tRNA synthetase [Vibrio fischeri SR5]
Length = 859
Score = 561 bits (1447), Expect = e-157, Method: Compositional matrix adjust.
Identities = 315/685 (45%), Positives = 434/685 (63%), Gaps = 48/685 (7%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S D IR+ FL F+ S+GH+++ S+SLVP DPT+L T AGM QFK FLG R RA
Sbjct: 4 STDEIRRAFLAFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDCFLGSEKRNYTRAT 63
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
T+QRC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI++AWEF T LPA
Sbjct: 64 TAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKQDAIKYAWEFLTERLELPA 123
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEI 216
+RL ++VYE DDEAFEIWNKE+G+P + I R+G A DNFW G TGPCGPC+EI
Sbjct: 124 DRLLVTVYETDDEAFEIWNKEMGIPADRIVRIGDNKGAPYASDNFWQMGDTGPCGPCTEI 183
Query: 217 YYDF--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIA 274
+YD H G D RFIE +N VFMQ+N+ DG++EPL + ++DTG+G+ERIA
Sbjct: 184 FYDHGEHIWGGRPGTPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPSVDTGMGIERIA 243
Query: 275 RILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVF 334
I+Q V +NYE D+ +IK+A+++ + Y +D +N +L+++ DH+R+ YL+ DGV
Sbjct: 244 AIMQGVHSNYEIDIFQTLIKEAAKV--IGY---DDLSNQSLRVVADHIRSCSYLIVDGVM 298
Query: 335 PSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAR 394
PSN GRGYV+RR+IRRAVR G LG KG L G + EL +
Sbjct: 299 PSNEGRGYVLRRIIRRAVRHGNKLGAKGSYFYKLVGPLAEIMGTAGEELK---------K 349
Query: 395 EQRILEE-LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFG 453
+Q ++E+ LK EE F +TLERG LL++ L D L G+V L G+ F LYDT+G
Sbjct: 350 QQALVEKVLKIEEENFGRTLERGMALLNEAL-DNL-----EGTV--LDGETVFKLYDTYG 401
Query: 454 FPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFL 513
FP ++T +VA E +++D GF+ ME QR Q A A + D +A + + +T F
Sbjct: 402 FPADLTNDVARERDLTIDEDGFEKAMEEQR---QRAREAGQFGTDYNAVIKVE-SETVFH 457
Query: 514 GYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTN 573
GYD+ AKA V +L G+ V +S G + ++L++TPFYAESGGQ GD G + V
Sbjct: 458 GYDSTEAKASVIALFREGEEVDALSAGDEAILILDQTPFYAESGGQCGDAGIITV----- 512
Query: 574 QQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQA 633
+T V D K +G+ H G + EGVL A VD R ++H+ATHLL A
Sbjct: 513 -ETGKFVVTDTHK-IGNAIGHHGKLVEGVLSKADHAMAQVDETRRAAIILNHSATHLLHA 570
Query: 634 ALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMA 693
AL++V+G+ +Q GSLV + LRFDF+ + EL ++ER++N I + ++T +M
Sbjct: 571 ALRQVLGEHVTQKGSLVKAENLRFDFSHLEAVKAEELRQVERIVNQQIRLNHTIETDLMD 630
Query: 694 LDDAKRAGAIAMFGEKYGEQVKISS 718
+D AK GA+A+FGEKY ++V++ S
Sbjct: 631 IDAAKEKGAMALFGEKYDDEVRVLS 655
>gi|374336829|ref|YP_005093516.1| alanyl-tRNA synthetase [Oceanimonas sp. GK1]
gi|372986516|gb|AEY02766.1| alanyl-tRNA synthetase [Oceanimonas sp. GK1]
Length = 875
Score = 561 bits (1447), Expect = e-157, Method: Compositional matrix adjust.
Identities = 315/676 (46%), Positives = 433/676 (64%), Gaps = 49/676 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
+R FL+++ +GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA +SQR
Sbjct: 8 LRNAFLEYFRQQGHQVVASSSLVPHNDPTLLFTNAGMNQFKDLFLGLEQRAYNRAVSSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI++AWEF T LP ++LW
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAIRFAWEFLTEVVKLPKDKLW 127
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYYDF 220
++VYE DDEAF IW++E+GVPV+ I R+G A DNFW G TGPCGPC+EI+YD
Sbjct: 128 VTVYETDDEAFGIWSQEIGVPVDRIVRIGDNKGAQYASDNFWTMGDTGPCGPCTEIFYDH 187
Query: 221 --HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQ 278
H G D R+IE +NLVFMQ+N+ DG++EPL + ++DTG+GLERIA ILQ
Sbjct: 188 GEHIWGGPPGSPEEDGDRYIEIWNLVFMQFNRHADGTMEPLPKPSVDTGMGLERIATILQ 247
Query: 279 KVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNI 338
V +NYE DL +IK A+E + D N +L++I DH+R+ +L++DGV PSN
Sbjct: 248 GVHSNYEIDLFQALIKAAAEAVG-----TTDLDNKSLRVIADHIRSCSFLIADGVMPSNE 302
Query: 339 GRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRI 398
GRGYV+RR+IRRAVR GR LG L GA + E EL+T ++ I
Sbjct: 303 GRGYVLRRIIRRAVRHGRKLGADKSFFHTLVGALCEQMGEAYPELNT---------QRPI 353
Query: 399 LEE-LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVE 457
+E+ L+ EE +F +TL+RG +LL+ DA++ E +P G+ F LYDT+GFP +
Sbjct: 354 IEKVLRLEEEQFARTLDRGLQLLE----DAINELGEGKVLP---GEVVFKLYDTYGFPAD 406
Query: 458 ITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDT 517
+T +V + +S+D GF+ M+ QR +++ A N VD S + + +T F GY+
Sbjct: 407 LTADVLRDRDISIDEAGFETLMQQQRERAKEASN---FGVDYS-KVIKVDGETAFTGYEH 462
Query: 518 LSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTA 577
L+ V L NG+PV + G + V+L+ TPFYAESGGQ+GD G + + G
Sbjct: 463 LAQPGKVTGLFKNGEPVPALIAGEEGAVVLDTTPFYAESGGQVGDAGVIRMDDG------ 516
Query: 578 VVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKK 637
+ VKD +K+ GS +H G + G LEVG EV A VD RQ ++H+ THLL A+L+K
Sbjct: 517 LFVVKDTQKA-GSGILHLGYLELGTLEVGEEVAAAVDGARRQATALNHSVTHLLHASLRK 575
Query: 638 VIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANL-LQTKVMALDD 696
++G +Q GSLV +RLRFDF+ + EL E+E ++N I ANL + T++M L+
Sbjct: 576 LLGDHVTQKGSLVEPERLRFDFSHLEAMSAQELREVEDMVNRDI-RANLPVSTELMDLEG 634
Query: 697 AKRAGAIAMFGEKYGE 712
AKRAGA A+FGEKY E
Sbjct: 635 AKRAGATALFGEKYDE 650
>gi|417001134|ref|ZP_11941048.1| alanine--tRNA ligase [Veillonella parvula ACS-068-V-Sch12]
gi|333975617|gb|EGL76496.1| alanine--tRNA ligase [Veillonella parvula ACS-068-V-Sch12]
Length = 871
Score = 561 bits (1447), Expect = e-157, Method: Compositional matrix adjust.
Identities = 308/676 (45%), Positives = 427/676 (63%), Gaps = 40/676 (5%)
Query: 50 GDSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
G+ +R+ +L F+ S+GH L S SL+PE DP++LL AGM KP F GK+ R T
Sbjct: 3 GNELRQAYLQFFESKGHLKLDSFSLIPENDPSLLLIGAGMAPLKPFFTGKLVPPCHRITT 62
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
SQ+C+RT D+ENVGRT+RHHTFFEMLGNFSFGDYFKKEAI WAWEF T L NRL++
Sbjct: 63 SQKCMRTGDLENVGRTARHHTFFEMLGNFSFGDYFKKEAIHWAWEFLTEVIKLDKNRLYV 122
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
+VY DD EA++ W+ + GV HI R+ +DNFW G GPCGP SEI++D P+ GC D
Sbjct: 123 TVYPDDQEAYDTWHNDCGVEESHITRL--EDNFWEIG-EGPCGPDSEIFFDQGPEHGCDD 179
Query: 229 VDLG---DDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYE 285
+ D R++E +NLVF Q+NK DGS EPL+ KNIDTG GLER+A +LQ N+E
Sbjct: 180 PNCAPGCDCDRYLEIWNLVFTQFNKMPDGSYEPLQHKNIDTGAGLERLASVLQGCKTNFE 239
Query: 286 TDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVR 345
TDLIFPII+ ++ A V Y + + T+++LK+I DH RA+ L+SDGV PSN GRGYV+R
Sbjct: 240 TDLIFPIIEATAKRAGVKYNE-DPNTDVSLKVIADHARAVTALISDGVLPSNEGRGYVLR 298
Query: 346 RLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKRE 405
R++RRAVR GRLLGI EG FL + + +++ + ++ + ++ E
Sbjct: 299 RILRRAVRHGRLLGI--------EGIFLTPLIDVVVDILGPGIKSIAEKQDFVKRVVQNE 350
Query: 406 ELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEE 465
E RF QTLE+G +LL+ ++ D L+ + + VP G + F LYDT+GFP E+T+E+A E
Sbjct: 351 EERFNQTLEQGLELLNSLI-DTLAAEKAT-VVP---GTEVFKLYDTYGFPWELTEEIASE 405
Query: 466 HGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTL--SAKAI 523
G ++D +GF+ M+ QR +++ A V + A +A PD FL + L
Sbjct: 406 RGFTIDHEGFEAAMKEQRERAREAR------VKEDAKVA--TPDITFLKDEELVEDEAET 457
Query: 524 VESLLVNGKPVIKV---SKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVE 580
S+L+ GK ++ + G ++ V++ TPF+AE GGQ+GD GF+ G VE
Sbjct: 458 ASSVLMLGKGSERLQTAADGDEITVIVRTTPFHAEGGGQLGDTGFIVGPMGK------VE 511
Query: 581 VKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIG 640
V + K+ H GT+ EG + G +V VD R +HTATHLL AALKKV+G
Sbjct: 512 VHNTKRLPEGTVYHIGTVIEGSISEGDDVTLEVDTARRSAMARNHTATHLLHAALKKVLG 571
Query: 641 QETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRA 700
+ +QAGSLV D LRFDF P+ EL++IE L+N I A L M++++AK
Sbjct: 572 EHVNQAGSLVTPDYLRFDFTHFSPVTQEELDQIEALVNEEILKATDLAIAEMSMEEAKAK 631
Query: 701 GAIAMFGEKYGEQVKI 716
GA+A+FG+KYG+ V++
Sbjct: 632 GAMALFGDKYGDVVRV 647
>gi|90412109|ref|ZP_01220116.1| alanyl-tRNA synthetase [Photobacterium profundum 3TCK]
gi|90327087|gb|EAS43466.1| alanyl-tRNA synthetase [Photobacterium profundum 3TCK]
Length = 873
Score = 561 bits (1447), Expect = e-157, Method: Compositional matrix adjust.
Identities = 304/684 (44%), Positives = 435/684 (63%), Gaps = 46/684 (6%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S D IR+ FL F+ S+GH+++ S+SLVP DPT+L T AGM QFK FLG R RA
Sbjct: 4 STDEIRRAFLAFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDTFLGIEKRSYTRAT 63
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
T+QRC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI++AWEF T GLP
Sbjct: 64 TAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKQDAIKYAWEFLTDVLGLPQ 123
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEI 216
+RL +++YE DDEAF+IWNKE+G+P + I R+G A DNFW G TGPCGPC+EI
Sbjct: 124 DRLLVTIYETDDEAFDIWNKEMGIPADRIVRIGDNKGAPYASDNFWQMGDTGPCGPCTEI 183
Query: 217 YYDF--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIA 274
+YD H G D RFIE +N VFMQ+N++ DG++EPL + ++DTG+G+ERIA
Sbjct: 184 FYDHGEHIWGGRPGTPEEDGDRFIEIWNNVFMQFNRQADGTMEPLPKPSVDTGMGIERIA 243
Query: 275 RILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVF 334
I+Q V +NYE D+ +IKK++E+ + Y D +N +L+++ DH+R+ +L+ DGV
Sbjct: 244 AIMQGVHSNYEIDIFQTLIKKSAEV--IGY---EDLSNQSLRVVADHIRSCAFLIVDGVM 298
Query: 335 PSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAR 394
PSN GRGYV+RR+IRRAVR G LG GAF +A E+ ++K +
Sbjct: 299 PSNEGRGYVLRRIIRRAVRHGNKLGAT--------GAFFYKLAGPLAEIMGTAGEELKKQ 350
Query: 395 EQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGF 454
+ + + LK EE F +TL+RG +L+ DAL S L G+ F LYDT+GF
Sbjct: 351 QALVEKVLKIEEDNFGRTLDRGLTILN----DALDNL----SGKELDGETVFKLYDTYGF 402
Query: 455 PVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLG 514
P ++T +VA E ++D +GF+ ME QR Q A A K VD + + + +TEF G
Sbjct: 403 PADLTNDVARERDFTIDEEGFNNAMEAQR---QRAREAGKFGVDYNESIKVDV-NTEFCG 458
Query: 515 YDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQ 574
Y +A++ + +L +G+ V + G D ++L+ TPFYAESGGQ GD G L
Sbjct: 459 YTGTAAQSRIIALYRDGEAVDSILAGEDALIILDNTPFYAESGGQCGDAGVL------TA 512
Query: 575 QTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAA 634
++ + V D +K G+ H+G++ +G L +G ++EA VD R ++H+ATHLL +A
Sbjct: 513 ESTMFNVTDTQK-FGAAIGHQGSLVQGALNIGDKLEAQVDVARRAAITLNHSATHLLHSA 571
Query: 635 LKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMAL 694
L+ ++G+ +Q GSLV D LRFDF+ + +L EIER++N I + + T +M +
Sbjct: 572 LRNLLGEHVAQKGSLVKADALRFDFSNLEAVKPEQLREIERVVNEQIRLNHSIDTNIMDI 631
Query: 695 DDAKRAGAIAMFGEKYGEQVKISS 718
+ AK+ GA+A+FGEKY ++V++ S
Sbjct: 632 ESAKQKGAMALFGEKYDDEVRVLS 655
>gi|345871858|ref|ZP_08823800.1| alanyl-tRNA synthetase [Thiorhodococcus drewsii AZ1]
gi|343919914|gb|EGV30655.1| alanyl-tRNA synthetase [Thiorhodococcus drewsii AZ1]
Length = 867
Score = 561 bits (1447), Expect = e-157, Method: Compositional matrix adjust.
Identities = 294/671 (43%), Positives = 433/671 (64%), Gaps = 38/671 (5%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
+R FLD++A R H + S+ LVP DPT+L T AGM+QFK +FLG+ R RA +SQR
Sbjct: 7 LRASFLDYFAQRQHAEVASSPLVPANDPTLLFTNAGMVQFKELFLGRERRAYNRAVSSQR 66
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK+EAI +AWE+ T LP RLW
Sbjct: 67 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKREAIGFAWEYLTQVLSLPPERLW 126
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCS 227
++V+EDDDEA +IW KE+GV + R GA DNFW+ G TGPCGPCSEI+YD P+
Sbjct: 127 VTVFEDDDEAADIWLKEIGVDAKRFSRCGAKDNFWSMGDTGPCGPCSEIFYDHGPEIPGG 186
Query: 228 DVDLGDD--TRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYE 285
D+ R++E +NLVFMQ+N+ +G + PL + ++DTG+GLER+A + Q V +NY+
Sbjct: 187 PPGSPDEDGDRYVEIWNLVFMQFNRDAEGKMTPLPRPSVDTGMGLERLAAVKQGVHSNYD 246
Query: 286 TDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVR 345
DL +I+ A+E+ + DR + +L++I DH+R+ +L+ DGV PSN GRGYV+R
Sbjct: 247 IDLFRHLIEAAAEVTGCA-----DRADKSLRVIADHIRSTAFLIIDGVTPSNEGRGYVLR 301
Query: 346 RLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKRE 405
R++RRA+R G LG + F +A +E+ ++K+ + + +K E
Sbjct: 302 RIMRRAIRHGYRLGCS-------DPFFHRLVAPLVVEMGDAY-PELKSAQAHVERLIKLE 353
Query: 406 ELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEE 465
E RF +TL+ G ++LD+ +A S R+ G+ F LYDT+GFP ++T ++A E
Sbjct: 354 EERFAETLDHGMRILDEAIAGL--------SGDRIPGETVFKLYDTYGFPTDLTADIARE 405
Query: 466 HGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTLSAKAIVE 525
G+++DM+GF+ M Q+ +++AA + + ++ + +T+F GY+ L +A V
Sbjct: 406 RGLTLDMEGFESAMGAQKERARAAS---QFGATQTLEIQVQ-GETDFCGYERLREEATVV 461
Query: 526 SLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVK 585
+L +G + G + V+L+ TPFY ESGGQ+GD+G+L + +TA EV D +
Sbjct: 462 ALYRDGVSCDALESGEEGLVVLDITPFYGESGGQVGDHGWL------STETARFEVVDTQ 515
Query: 586 KSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQ 645
K G V +H G + EG L VG V+A VD + R ++H+ATHLL AAL++V+G Q
Sbjct: 516 KKGGGVMIHVGRVLEGSLTVGDRVDARVDAERRLETALNHSATHLLHAALRQVLGDHVQQ 575
Query: 646 AGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAM 705
GSLV +RLRFDF+ P+ +L EIERL+N + +L++T++M+LDDAK +GA+A+
Sbjct: 576 KGSLVGPERLRFDFSHFEPVSREQLLEIERLVNREVRANHLVETRIMSLDDAKASGAMAL 635
Query: 706 FGEKYGEQVKI 716
FGEKY +QV++
Sbjct: 636 FGEKYADQVRV 646
>gi|212709394|ref|ZP_03317522.1| hypothetical protein PROVALCAL_00430 [Providencia alcalifaciens DSM
30120]
gi|422019431|ref|ZP_16365979.1| alanyl-tRNA ligase [Providencia alcalifaciens Dmel2]
gi|212688306|gb|EEB47834.1| hypothetical protein PROVALCAL_00430 [Providencia alcalifaciens DSM
30120]
gi|414103270|gb|EKT64848.1| alanyl-tRNA ligase [Providencia alcalifaciens Dmel2]
Length = 875
Score = 561 bits (1447), Expect = e-157, Method: Compositional matrix adjust.
Identities = 314/690 (45%), Positives = 435/690 (63%), Gaps = 64/690 (9%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ ++GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 8 IRQAFLDFFHTKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRAYSRATTAQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AI++AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIRFAWELLTSEQWFNLPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VY DDEAF+IWNKE+GVPVE I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYATDDEAFDIWNKEIGVPVERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +NLVFMQ+N++ DG++EPL + ++DTG+GLERI+
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNLVFMQFNRQSDGTMEPLPKPSVDTGMGLERISA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NYE D+ +I A+ + D +N +L++I DH+R+ +L+SDGV P
Sbjct: 247 VLQHVNSNYEIDIFRELIAAAA-----EATGATDLSNKSLRVIADHIRSCAFLVSDGVIP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN GRGYV+RR+IRRAVR G +LG K L + + A EL R+
Sbjct: 302 SNEGRGYVLRRIIRRAVRHGYMLGAKETFFYKLVSTLIKVMGPAAEELQ---------RQ 352
Query: 396 QRILEE-LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGF 454
Q ++E+ LK EE +F +TLERG +LLD+ LA T L G+ AF LYDT+GF
Sbjct: 353 QALVEKVLKTEEEQFARTLERGLQLLDEELASLKGDT--------LEGETAFRLYDTYGF 404
Query: 455 PVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQ------AAHNAVKLSVDDSADLAEKIP 508
P+++T +V E + VD GF+ ME+QRR+++ A +NA+ + VD
Sbjct: 405 PLDLTADVCRERNIKVDEAGFERAMEDQRRRARESSGFGADYNAL-IKVDKR-------- 455
Query: 509 DTEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYV 568
+EF GY +A + +L +G+PV + G + V+L++T FYAESGGQ+GD G L
Sbjct: 456 -SEFSGYQHDEQQATIIALYKDGQPVDSLHTGDEGLVILDKTAFYAESGGQVGDTGVL-- 512
Query: 569 TQGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTAT 628
TN +A V D +K G H G + G L V + AIV+ + R +++H+AT
Sbjct: 513 ---TND-SAQFTVTDTQK-YGQAIGHVGKVESGSLVVNHRIAAIVNSERRNAIRLNHSAT 567
Query: 629 HLLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQ 688
HLL AAL++V+G+ SQ GSLV LRFDF+ + +L ++E ++N I + ++
Sbjct: 568 HLLHAALRQVLGEHVSQKGSLVNDKYLRFDFSHFEAMTQQQLRQVEDIVNAQIRQNSEIE 627
Query: 689 TKVMALDDAKRAGAIAMFGEKYGEQVKISS 718
T++M L+ AK GA+A+FGEKY E+V++ S
Sbjct: 628 TELMDLEGAKAKGAMALFGEKYEERVRVLS 657
>gi|336418553|ref|ZP_08598828.1| alanine--tRNA ligase [Fusobacterium sp. 11_3_2]
gi|336164547|gb|EGN67451.1| alanine--tRNA ligase [Fusobacterium sp. 11_3_2]
Length = 867
Score = 561 bits (1447), Expect = e-157, Method: Compositional matrix adjust.
Identities = 292/676 (43%), Positives = 433/676 (64%), Gaps = 39/676 (5%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
+G+ IR++F++F+ + HK SASL+P+DPT+LLT+AGM+ FKP FLG+ PR T
Sbjct: 3 TGNEIREKFIEFFMQKQHKHFESASLIPDDPTLLLTVAGMVPFKPYFLGQKEAPCPRVTT 62
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
Q+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFKKEAI+W+WEF T + ++LW+
Sbjct: 63 YQKCIRTNDLENVGRTARHHTFFEMLGNFSFGDYFKKEAIKWSWEFVTEVLKIDKDKLWV 122
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYD----FHPDR 224
+V+ DDEA +IW +E P E I RMG +N+W++G TG CGPCSEI+ D + D
Sbjct: 123 TVFTTDDEAEKIWTEECNFPKERIVRMGESENWWSAGPTGSCGPCSEIHVDLGVQYGGDE 182
Query: 225 GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNY 284
D G D RFIE +NLVF ++N+ +DGSLEPL +KNIDTG GLERIA ++Q NN+
Sbjct: 183 NSKIGDEGTDNRFIEIWNLVFTEWNRMEDGSLEPLPKKNIDTGAGLERIAAVVQGKTNNF 242
Query: 285 ETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVV 344
ETDL+FPI+++A ++ Y + N T+ +LK+I DH RA+ +L++DGV PSN GRGY++
Sbjct: 243 ETDLLFPILEEAGKITGSQYGK-NSETDFSLKVITDHARAVTFLINDGVIPSNEGRGYIL 301
Query: 345 RRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKR 404
RR++RRAVR GRLLG K F+ + +K +E D+K + I + +K
Sbjct: 302 RRILRRAVRHGRLLGYK--------DLFMHKMVDKVVEKFEVAYPDLKKNLENIRKIVKI 353
Query: 405 EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAE 464
EE +F TL++G +L++Q + + L+ + +L G+ +F LYDT+GFP E+T+E+AE
Sbjct: 354 EEEKFSNTLDQGMQLVNQEIDNLLANGKN-----KLDGEISFKLYDTYGFPYELTEEIAE 408
Query: 465 EHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPD----TEFLGYDTLSA 520
E GV+V + F+ +ME Q+ ++++A V DS EK D T+F GY+
Sbjct: 409 ERGVTVLREEFEAKMEEQKEKARSAREVVMEKGQDS--FIEKFYDKYGVTKFTGYEKTED 466
Query: 521 KAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVE 580
+ + SL + +K ++ ++TPFYAESGGQ+GD G ++ + +
Sbjct: 467 EGKLLSL--------REAKDGKYLLIFDKTPFYAESGGQVGDQGKIH------SDDFIGK 512
Query: 581 VKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIG 640
V DV+K +F+H +G+ E + + VD R +HTATHLL AL++V+G
Sbjct: 513 VLDVQKQ-KDIFIHTVEFEKGIAEENKTYKLEVDIVRRLDTAKNHTATHLLHKALREVVG 571
Query: 641 QETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRA 700
QAGSLV ++LRFDF+ + L +L +IE ++N I + + ++++AK+
Sbjct: 572 THVQQAGSLVDPEKLRFDFSHYEALTTEQLSKIEDIVNEKIREGVEVNISHHSIEEAKKL 631
Query: 701 GAIAMFGEKYGEQVKI 716
GA+ +FG+KYG+ V++
Sbjct: 632 GAMMLFGDKYGDVVRV 647
>gi|383817097|ref|ZP_09972480.1| alanyl-tRNA synthetase [Serratia sp. M24T3]
gi|383294080|gb|EIC82431.1| alanyl-tRNA synthetase [Serratia sp. M24T3]
Length = 875
Score = 561 bits (1447), Expect = e-157, Method: Compositional matrix adjust.
Identities = 313/690 (45%), Positives = 434/690 (62%), Gaps = 64/690 (9%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH V+ S+SL+P DPT++ T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHTVVDSSSLIPTNDPTLMFTNAGMNQFKDVFLGLDNRDYNRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI++AWE T E F LP +
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKEDAIKFAWELLTGEHWFNLPKEK 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VY DDEA++IW K++GVP E I R+G A DNFW G TGPCGPCSEI+Y
Sbjct: 128 LWVTVYATDDEAYDIWEKQIGVPKERIIRIGDNKGAQYASDNFWQMGDTGPCGPCSEIFY 187
Query: 219 DFHPDR------GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLER 272
D H D G ++ D GD R+IE +NLVFMQ+N++ DG++ PL + ++DTG+GLER
Sbjct: 188 D-HGDHIWGGPPGSAEED-GD--RYIEIWNLVFMQFNRQADGTMLPLPKPSVDTGMGLER 243
Query: 273 IARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDG 332
I +LQ V +NY+ DL +I +++ + D N +L++I DH+R+ +L+SDG
Sbjct: 244 ITAVLQHVNSNYDIDLFQKLIAAVAQVTGAT-----DLNNKSLRVIADHIRSCAFLISDG 298
Query: 333 VFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVK 392
V PSN GRGYV+RR+IRRAVR G +LG K L + + IEL
Sbjct: 299 VIPSNEGRGYVLRRIIRRAVRHGNMLGAKETFFYKLVAPLVEVMGSAGIEL--------- 349
Query: 393 AREQRILEEL-KREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDT 451
A++Q +E+L K EE +F +TLERG LLD+ LA T L G F LYDT
Sbjct: 350 AKQQSTVEQLLKTEEEQFARTLERGLALLDEELAALKGDT--------LPGDIVFRLYDT 401
Query: 452 FGFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKI---P 508
FGFPV++T +V E + +D +GF+ ME QR N + S SAD +
Sbjct: 402 FGFPVDLTADVCRERNLKIDEEGFEKAMEVQR-------NRARESSGFSADYNSMVRVDG 454
Query: 509 DTEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYV 568
T+F GY+ + ++ V +L V+G+PV ++ G + V+L+ TPFY ESGGQ+GD G L
Sbjct: 455 VTQFSGYEHVQRQSKVVALFVDGQPVNEIEAGVNAIVVLDDTPFYGESGGQVGDKGVLKT 514
Query: 569 TQGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTAT 628
+ G + AV + + K++G H+G + G L +G VEA VD R R +++H+AT
Sbjct: 515 SAG---EFAVGDTQKYGKAIG----HQGVLSAGKLAIGDSVEADVDSARRDRIRLNHSAT 567
Query: 629 HLLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQ 688
HLL AAL++ +G+ +Q GSLV + LRFDF+ + E+ ++E L+N I ++
Sbjct: 568 HLLHAALRQTLGKHVAQKGSLVNDNYLRFDFSHFEAMKPEEIRQVEDLVNAQIRRNLPIE 627
Query: 689 TKVMALDDAKRAGAIAMFGEKYGEQVKISS 718
TK+MALDDAK GA+A+FGEKY + V++ S
Sbjct: 628 TKIMALDDAKEKGAMALFGEKYEDNVRVLS 657
>gi|238018985|ref|ZP_04599411.1| hypothetical protein VEIDISOL_00847 [Veillonella dispar ATCC 17748]
gi|237864469|gb|EEP65759.1| hypothetical protein VEIDISOL_00847 [Veillonella dispar ATCC 17748]
Length = 871
Score = 561 bits (1447), Expect = e-157, Method: Compositional matrix adjust.
Identities = 308/681 (45%), Positives = 426/681 (62%), Gaps = 50/681 (7%)
Query: 50 GDSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
G+ +R+ +L F+ S+GH L S SL+PE DP++LL AGM KP F GK+ R T
Sbjct: 3 GNELRQAYLQFFESKGHLKLDSFSLIPENDPSLLLIGAGMAPLKPFFTGKLVPPCHRITT 62
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
SQ+C+RT D+ENVGRT+RHHTFFEMLGNFSFGDYFKKEAI WAWEF T L NRL++
Sbjct: 63 SQKCMRTGDLENVGRTARHHTFFEMLGNFSFGDYFKKEAIHWAWEFLTEVIKLDKNRLYV 122
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
+VY DD EA++ W+ + GV HI R+ +DNFW G GPCGP SEI++D P+ GC D
Sbjct: 123 TVYPDDQEAYDTWHNDCGVEESHITRL--EDNFWEIG-EGPCGPDSEIFFDQGPEHGCDD 179
Query: 229 VDLG---DDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYE 285
+ D R++E +NLVF Q+NK DGS EPL+ KNIDTG GLER+A +LQ N+E
Sbjct: 180 PNCAPGCDCDRYLEIWNLVFTQFNKMPDGSYEPLQHKNIDTGAGLERLASVLQGCKTNFE 239
Query: 286 TDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVR 345
TDLI+PII+ ++ A V+Y + + T+++LK+I DH RA+ L+SDGV PSN GRGYV+R
Sbjct: 240 TDLIYPIIEATAKRAGVTYNE-DPNTDVSLKVIADHARAVTALISDGVLPSNEGRGYVLR 298
Query: 346 RLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKRE 405
R++RRAVR GRLLGI E FL + + +++ + ++ + ++ E
Sbjct: 299 RILRRAVRHGRLLGI--------ESIFLTPLIDVVVDILGPGIKSIAEKQDFVKRVVQNE 350
Query: 406 ELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEE 465
E RF QTLE+G +LL+ ++ D L+ + + VP G + F LYDT+GFP E+T+E+A E
Sbjct: 351 EERFNQTLEQGLELLNSLI-DTLAAEKAT-VVP---GTEVFKLYDTYGFPWELTEEIASE 405
Query: 466 HGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTLSAKAIVE 525
G ++D +GF+ M+ QR +++ A V + A +A PD FL + L +E
Sbjct: 406 RGFTIDHEGFEAAMKEQRERAREAR------VKEDAKVA--TPDITFLKDEEL-----LE 452
Query: 526 SLLVNGKPVIKVSKGS----------DVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
V V+ + KGS ++ V++ TPF+AE GGQ+GD GF+ G
Sbjct: 453 DEAVTASSVLMIGKGSERLQTAADGDEITVIVRTTPFHAEGGGQLGDTGFIVGPMGK--- 509
Query: 576 TAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAAL 635
VEV + K+ H GT+ EG + G +V VD R +HTATHLL AAL
Sbjct: 510 ---VEVHNTKRLPEGTVYHIGTVVEGSISEGDDVTLEVDTNRRAAMARNHTATHLLHAAL 566
Query: 636 KKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALD 695
KKV+G+ +QAGSLV D LRFDF P+ EL++IE L+N I A L M++D
Sbjct: 567 KKVLGEHVNQAGSLVTPDYLRFDFTHFSPVTQEELDQIEALVNEEILKATDLAIAEMSMD 626
Query: 696 DAKRAGAIAMFGEKYGEQVKI 716
+AK GA+A+FG+KYG+ V++
Sbjct: 627 EAKAKGAMALFGDKYGDVVRV 647
>gi|359439375|ref|ZP_09229350.1| alanyl-tRNA synthetase [Pseudoalteromonas sp. BSi20311]
gi|358025953|dbj|GAA65599.1| alanyl-tRNA synthetase [Pseudoalteromonas sp. BSi20311]
Length = 866
Score = 561 bits (1446), Expect = e-157, Method: Compositional matrix adjust.
Identities = 303/672 (45%), Positives = 427/672 (63%), Gaps = 42/672 (6%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR++FLDF+AS+ H+V+PS+SL+P D T+L AGM+QFK +FLG R RA +SQR
Sbjct: 9 IRQQFLDFFASKQHQVVPSSSLIPGNDATLLFNNAGMVQFKDVFLGAESRPYTRATSSQR 68
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI++AWEF T LP +L
Sbjct: 69 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAIKFAWEFLTEVVKLPKEKLL 128
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDF--HPDRG 225
+++Y DD+EAF W ++G+P + I R+ DNFW+ G TGPCGPCSEI+YD H G
Sbjct: 129 VTIYHDDEEAFGYWANDIGLPEDRIIRIATSDNFWSMGDTGPCGPCSEIFYDHGEHIWGG 188
Query: 226 CSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYE 285
D RFIE +NLVFMQYN++ DG++EPL ++++DTG+GLERI+ ILQ V +NYE
Sbjct: 189 PPGTPEEDGDRFIEIWNLVFMQYNRQSDGTMEPLPKQSVDTGMGLERISAILQGVHSNYE 248
Query: 286 TDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVR 345
DL +I A+ + N + D + +L+++ DH+R+ +L+SDGV PSN GRGYV+R
Sbjct: 249 IDLFQGLIAAAASVTN-----AQDMDDKSLRVVADHIRSCAFLISDGVMPSNEGRGYVLR 303
Query: 346 RLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKR- 404
R+IRRAVR G LG KG L A + + + EL A++Q I+E++ R
Sbjct: 304 RIIRRAVRHGNKLGAKGAFFYKLVAALIEQMGQAYPEL---------AKQQEIIEKVLRI 354
Query: 405 EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAE 464
EE +F +TLERG +L++ L+D +G V + G F LYDT+GFP ++T +VA
Sbjct: 355 EEEQFGKTLERGLAILEESLSDL------TGDV--IPGDLVFKLYDTYGFPADLTADVAR 406
Query: 465 EHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTLSAKAIV 524
E +++D +GF+ M QR+ +Q A K D + L T+F GYD+ V
Sbjct: 407 ERQMTIDHQGFEACMAVQRKTAQ---QAGKFGADYNEQLKSD-KHTDFKGYDSTHYSGTV 462
Query: 525 ESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDV 584
+ G+ V + G ++L+RTPFYAESGGQIGD G + V G T +
Sbjct: 463 VEIFAAGEAVSLLEDGQHGIIVLDRTPFYAESGGQIGDSGTITVAGGEFVVTNTTK---- 518
Query: 585 KKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETS 644
LG+ F H G++ +G + V +V+A +D R K +HTATH+L AL++++G+ S
Sbjct: 519 ---LGNAFAHHGSV-QGRIGVNDKVDATIDDARRDSIKKNHTATHILHEALRQLLGEHVS 574
Query: 645 QAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIA 704
Q GSLV DRLRFDF+ + EL EIER++N I L T++MA+DDAK GA+A
Sbjct: 575 QKGSLVQPDRLRFDFSHFEAVTKQELREIERVVNDEIRRNFALNTELMAIDDAKAKGAMA 634
Query: 705 MFGEKYGEQVKI 716
+FGEKY ++V++
Sbjct: 635 LFGEKYDDEVRV 646
>gi|197336333|ref|YP_002155293.1| alanyl-tRNA synthetase [Vibrio fischeri MJ11]
gi|197317823|gb|ACH67270.1| alanyl-tRNA synthetase [Vibrio fischeri MJ11]
Length = 859
Score = 561 bits (1446), Expect = e-157, Method: Compositional matrix adjust.
Identities = 315/685 (45%), Positives = 434/685 (63%), Gaps = 48/685 (7%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S D IR+ FL F+ S+GH+++ S+SLVP DPT+L T AGM QFK FLG R RA
Sbjct: 4 STDEIRRAFLAFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDCFLGSEKRNYTRAT 63
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
T+QRC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI++AWEF T LPA
Sbjct: 64 TAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKQDAIKYAWEFLTERLELPA 123
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEI 216
+RL ++VYE DDEAFEIWNKE+G+P + I R+G A DNFW G TGPCGPC+EI
Sbjct: 124 DRLLVTVYETDDEAFEIWNKEMGIPADRIVRIGDNKGAPYASDNFWQMGDTGPCGPCTEI 183
Query: 217 YYDF--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIA 274
+YD H G D RFIE +N VFMQ+N+ DG++EPL + ++DTG+G+ERIA
Sbjct: 184 FYDHGEHIWGGRPGTPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPSVDTGMGIERIA 243
Query: 275 RILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVF 334
I+Q V +NYE D+ +IK+A+++ + Y +D +N +L+++ DH+R+ YL+ DGV
Sbjct: 244 AIMQGVHSNYEIDIFQTLIKEAAKV--IGY---DDLSNQSLRVVADHIRSCSYLIVDGVM 298
Query: 335 PSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAR 394
PSN GRGYV+RR+IRRAVR G LG KG L G + EL +
Sbjct: 299 PSNEGRGYVLRRIIRRAVRHGNKLGAKGSYFYKLVGPLAEIMGTAGEELK---------K 349
Query: 395 EQRILEE-LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFG 453
+Q ++E+ LK EE F +TLERG LL++ L D L G+V L G+ F LYDT+G
Sbjct: 350 QQALVEKVLKIEEENFGRTLERGMALLNEAL-DNL-----EGTV--LDGETVFKLYDTYG 401
Query: 454 FPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFL 513
FP ++T +VA E +++D GF+ ME QR Q A A + D +A + + +T F
Sbjct: 402 FPADLTNDVARERDLTIDEDGFEKAMEEQR---QRAREAGQFGTDYNAVIKVE-SETVFH 457
Query: 514 GYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTN 573
GYD+ AKA V +L G+ V +S G + ++L++TPFYAESGGQ GD G + V
Sbjct: 458 GYDSTEAKASVIALFREGEEVDALSAGDEAILILDQTPFYAESGGQCGDAGIITV----- 512
Query: 574 QQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQA 633
+T V D K +G+ H G + EGVL A VD R ++H+ATHLL A
Sbjct: 513 -ETGKFVVTDTHK-IGNAIGHHGKLVEGVLSKADHAMAQVDETRRAAIILNHSATHLLHA 570
Query: 634 ALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMA 693
AL++V+G+ +Q GSLV + LRFDF+ + EL ++ER++N I + ++T +M
Sbjct: 571 ALRQVLGEHVTQKGSLVKAENLRFDFSHLEAVKAEELRQVERIVNQQIRLNHTIETDLMD 630
Query: 694 LDDAKRAGAIAMFGEKYGEQVKISS 718
+D AK GA+A+FGEKY ++V++ S
Sbjct: 631 IDAAKEKGAMALFGEKYDDEVRVLS 655
>gi|27262306|gb|AAN87434.1| Alanyl-tRNA synthetase [Heliobacillus mobilis]
Length = 883
Score = 561 bits (1446), Expect = e-157, Method: Compositional matrix adjust.
Identities = 302/679 (44%), Positives = 436/679 (64%), Gaps = 32/679 (4%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
+G+ +R+ FL+++ +GH V+ S+SLVP DPT+L T AGM QFK +FLG R RA
Sbjct: 4 TGNRVRQLFLEYFEQKGHTVVASSSLVPHNDPTLLFTNAGMNQFKDLFLGYEKRPYVRAT 63
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
TSQ+C+R ND++ VGRT+RHHTFFEMLGNFSFGDYFKK+AI++AWEF T LP
Sbjct: 64 TSQKCVRAGGKHNDLDTVGRTARHHTFFEMLGNFSFGDYFKKDAIRFAWEFLTDVVKLPK 123
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDF--H 221
++L+ ++Y DD+EA E+W KE+GVP E I R+G DNFW+ G TGPCGPCSEI D H
Sbjct: 124 DKLYATIYLDDEEAHELWKKEIGVPEERIIRLGEKDNFWSMGDTGPCGPCSEILIDRGEH 183
Query: 222 PDRGCSDVDLG--DDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQK 279
G + +G D R++E +NLVFMQ+N+ + G + PL + +IDTG+GLERI +LQ
Sbjct: 184 LRCGAEECAIGKCDCDRWLEIWNLVFMQFNRDEQGVMTPLPKPSIDTGMGLERITSVLQD 243
Query: 280 VPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIG 339
VP+NY+TDL+ P+I +L+ Y +DR ++I DH+R+ +L++DGV P N G
Sbjct: 244 VPSNYDTDLLRPLITYVEQLSGKEY-HRDDR-GFPFRVIADHIRSCTFLITDGVLPGNEG 301
Query: 340 RGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRIL 399
RGYV+RR++RRAVR G+++GI E F+ I +EL ++K ++ +
Sbjct: 302 RGYVLRRILRRAVRFGKVIGI--------EKPFMYQIVPVVVELMGEAYPEIKEKQDFVQ 353
Query: 400 EELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEIT 459
+ +K EE RF +TL G ++ AD +++ +E G L G+ AF LYDT+GFP+++
Sbjct: 354 KVIKIEEERFHETLHEGMRI----AADIVAKVKEDGG-GVLPGRQAFTLYDTYGFPLDLA 408
Query: 460 KEVAEEHGVSVDMKGFDIEMENQRRQSQAAH--NAVKLSVDDSADLAEKIPDTEFLGYDT 517
+++AEE+G++VD GF ME QR +++AA + ++ ADL K+ T F GY
Sbjct: 409 EDIAEENGLTVDKDGFAAAMEAQRERARAARQDTSYGAGMEIWADLLNKLGPTAFTGYGQ 468
Query: 518 LSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTA 577
LS ++ + +++ + V + S G+ V+V+L TPFYAESGGQIGD G++ + A
Sbjct: 469 LSGQSQLLAIVSGPEQVAEASVGTAVQVVLAETPFYAESGGQIGDTGYIRTDK------A 522
Query: 578 VVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKK 637
++ + D KK G +FVH G + EG + G V A V RQ HH+ATHLL ALK
Sbjct: 523 IIRIDDTKKMAGGLFVHVGVVEEGTFQAGETVTAEVTGLRRQAIARHHSATHLLHRALKD 582
Query: 638 VIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDA 697
V+G+ +QAGSLV DRLRFDF+ PL E ++IE +N + + ++ LD+A
Sbjct: 583 VLGEHVNQAGSLVTGDRLRFDFSHFTPLTREEWKQIEESVNRQVFRSLPVEVFEATLDEA 642
Query: 698 KRAGAIAMFGEKYGEQVKI 716
K GA A+FGEKYG+ V++
Sbjct: 643 KAMGATALFGEKYGDHVRV 661
>gi|308187884|ref|YP_003932015.1| alanyl-tRNA synthetase [Pantoea vagans C9-1]
gi|308058394|gb|ADO10566.1| Alanyl-tRNA synthetase [Pantoea vagans C9-1]
Length = 875
Score = 561 bits (1446), Expect = e-157, Method: Compositional matrix adjust.
Identities = 305/681 (44%), Positives = 427/681 (62%), Gaps = 50/681 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG+ R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHEVVTSSSLVPNNDPTLLFTNAGMNQFKDVFLGQDKRDYTRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK+EAI +AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKREAIGFAWELLTSEQWFSLPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+ IW E+GVP E I R+G A DNFW G TGPCGPCSEI+Y
Sbjct: 128 LWVTVYETDDEAYNIWADEIGVPRERIIRIGDNKGSAYASDNFWQMGDTGPCGPCSEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++ PL + ++DTG+GLERI+
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMLPLPKPSVDTGMGLERISA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NYE DL +I+ +++ + D +N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYEIDLFQKLIQAVAQVTGAT-----DLSNKSLRVIADHIRSCAFLIADGVIP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG K AF + +E+ +++ ++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAKE--------AFFYKLVAPLVEVMGAAGEELQRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ L T L G+ F LYDTFGFP
Sbjct: 354 AQVEQVLKSEEDQFARTLERGLALLDEELEKLQGDT--------LDGEIVFRLYDTFGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGY 515
++T +V E + +D GF+ ME QR Q A A D S ++ + F GY
Sbjct: 406 ADLTADVCRERNLKIDEAGFEQAMEQQR---QRAREASGFGADYS-NVIRIDAASSFKGY 461
Query: 516 DTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
D L A V++L V G+ V +V+ G D V+L+ TPFY ESGGQ+GD G L +G N +
Sbjct: 462 DQLDLAATVKALYVAGEAVDEVTAGQDAVVVLDETPFYGESGGQVGDTGLL---KGKNAE 518
Query: 576 TAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAAL 635
+V + + +++G H G + G L +G +EA VD R R +++H+ATHLL AAL
Sbjct: 519 FSVQDTQKYGQAIG----HVGKLTAGQLRIGDRLEAQVDAARRARIRLNHSATHLLHAAL 574
Query: 636 KKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALD 695
++V+G+ +Q GSLV LRFDF+ + E+ ++E ++N I ++T+VM L+
Sbjct: 575 RQVLGEHVAQKGSLVNDKYLRFDFSHFEAMKPHEIRQVEDIVNAQIRRNLPVETEVMDLE 634
Query: 696 DAKRAGAIAMFGEKYGEQVKI 716
AK GA+A+FGEKY ++V++
Sbjct: 635 AAKSKGAMALFGEKYDQRVRV 655
>gi|167855110|ref|ZP_02477882.1| alanyl-tRNA synthetase [Haemophilus parasuis 29755]
gi|167853745|gb|EDS24987.1| alanyl-tRNA synthetase [Haemophilus parasuis 29755]
Length = 853
Score = 561 bits (1446), Expect = e-157, Method: Compositional matrix adjust.
Identities = 312/677 (46%), Positives = 433/677 (63%), Gaps = 74/677 (10%)
Query: 69 LPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQRCIRT----NDVENVGR 123
+PS+SLVPE DPT+L T AGM QFK +FLG R RA +SQRC+R ND+ENVG
Sbjct: 1 MPSSSLVPENDPTLLFTNAGMNQFKDVFLGLDKRSYNRATSSQRCVRAGGKHNDLENVGY 60
Query: 124 TSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANRLWISVYEDDDEAFEIW 181
T+RHHTFFEMLGNFSFGDYFK +AI +AWEF T LP +LW++VYE DDEA++IW
Sbjct: 61 TARHHTFFEMLGNFSFGDYFKPDAIAFAWEFLTSPQWLALPKEKLWVTVYETDDEAYDIW 120
Query: 182 NKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYYDFHPDR------GCSD 228
N+E+GVP E I R+G A DNFW G TGPCGPC+EI+YD H D G ++
Sbjct: 121 NREIGVPAERIVRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFYD-HGDHIWGGPPGSAE 179
Query: 229 VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDL 288
D GD RFIE +N+VFMQ+N++ DG+L+ L + ++DTG+GLERI+ +LQ V +NYE D+
Sbjct: 180 ED-GD--RFIEVWNVVFMQFNRQADGTLKKLPKPSVDTGMGLERISAVLQHVNSNYEIDI 236
Query: 289 IFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLI 348
+IK+ + L NV+ D N +L++I DH+R+ YL++DGV PSN GRGYV+RR+I
Sbjct: 237 FQALIKEIASLLNVT-----DLDNKSLRVIADHIRSCAYLIADGVMPSNEGRGYVLRRII 291
Query: 349 RRAVRTGRLLGIKGDGRGNLEGAF----LPSIAEKAIELSTHIDSDVKAREQRILEELKR 404
RRAVR G +LG K AF +P++A KA+ + I + ++ I + LK
Sbjct: 292 RRAVRHGNILGAKS--------AFFYQLVPTLA-KAMGQAGEI---LTQKQAHIQKALKA 339
Query: 405 EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAE 464
EE +F +TLERG LL+ LA ++ LSG+ AF LYDT+GFP+++T +V
Sbjct: 340 EEDQFARTLERGLALLEDALAKVENKV--------LSGEVAFKLYDTYGFPLDLTADVCR 391
Query: 465 EHGVSVDMKGFDIEMENQRRQSQAAHN-----AVKLSVDDSADLAEKIPDTEFLGYDTLS 519
E G+++D F+ EM+ QR ++QA+ N + VD S TEF GY+
Sbjct: 392 ERGITIDEASFEREMQAQRARAQASSNFGTDYNYVIKVDGS---------TEFKGYEVTE 442
Query: 520 AKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVV 579
+A V +L NGK V + G + V+L+RT FY ESGGQ+GD G + +
Sbjct: 443 CEATVVALFSNGKAVEAIQSGENAVVVLDRTAFYGESGGQVGDSGVIA------SEICNF 496
Query: 580 EVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVI 639
EV D +K G VF H G + G L VG +V+A V+ R ++H+ATHLL +AL++V+
Sbjct: 497 EVNDTQK-YGQVFGHIGQLASGTLSVGDKVKAEVNTTRRHAITLNHSATHLLHSALRQVL 555
Query: 640 GQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKR 699
G +Q GSLV+ + LRFDF+ + +LEEIER+IN I + ++ T+VM L+ AK+
Sbjct: 556 GDHVAQKGSLVSENSLRFDFSQGEAISKADLEEIERIINTKIRENIVVTTEVMDLESAKQ 615
Query: 700 AGAIAMFGEKYGEQVKI 716
GA+A+FGEKYG++V++
Sbjct: 616 KGAMALFGEKYGDRVRV 632
>gi|345300550|ref|YP_004829908.1| alanyl-tRNA synthetase [Enterobacter asburiae LF7a]
gi|345094487|gb|AEN66123.1| alanyl-tRNA synthetase [Enterobacter asburiae LF7a]
Length = 875
Score = 561 bits (1446), Expect = e-157, Method: Compositional matrix adjust.
Identities = 318/689 (46%), Positives = 435/689 (63%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQYAWELLTGENWFKLPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +IK +E+ + D +N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFHTLIKSVAEVTGAT-----DLSNKSLRVIADHIRSCAFLIADGVIP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRA+R G +LG K L G + + EL K ++
Sbjct: 302 SNENRGYVLRRIIRRAIRHGNMLGAKDTFFYKLVGPLVSVMGAAGDEL--------KRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 SQVEHVLKTEEEQFARTLERGLALLDEELAKLKGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQ------AAHNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRARESSGFGADYNAM-IRVDGA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD L V +L V+GK V +S G D V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDNLELTGKVTALFVDGKSVDSISAGQDAVVILDKTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G +V + + +++G H+G + G L+VG V+A VD R R +++H+ATH
Sbjct: 513 KGDGFSFSVTDTQKYGQAIG----HQGKLVSGSLKVGEGVQANVDEARRARIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL+ V+G +Q GSLV LRFDF+ + +E+ +E L+N I ++T
Sbjct: 569 LMHAALRDVLGTHVAQKGSLVNDKVLRFDFSHFEAMKPSEIRAVEDLVNAQIRRNLAIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M LD AK+ GA+A+FGEKY E+V++ S
Sbjct: 629 NIMDLDAAKKKGAMALFGEKYDERVRVLS 657
>gi|325833382|ref|ZP_08165831.1| alanine--tRNA ligase [Eggerthella sp. HGA1]
gi|325485306|gb|EGC87775.1| alanine--tRNA ligase [Eggerthella sp. HGA1]
Length = 878
Score = 561 bits (1445), Expect = e-157, Method: Compositional matrix adjust.
Identities = 296/674 (43%), Positives = 422/674 (62%), Gaps = 34/674 (5%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATS--Q 110
IR+++L F+ +G K PS+SL+P+DP++LLT AGM+QFKP FL + + P T+ Q
Sbjct: 9 IREKYLSFFEEKGCKRWPSSSLIPDDPSLLLTSAGMVQFKPYFLQQKHLEAPYIGTTTVQ 68
Query: 111 RCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWISV 170
+C+RTND++ +G T RH +FFEMLGNFSFG+YFK+E WA+EFST GLPA RL+ +V
Sbjct: 69 KCVRTNDIDIIGTTGRHQSFFEMLGNFSFGEYFKEEMCAWAYEFSTEVLGLPAERLYFTV 128
Query: 171 YEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSDVD 230
Y DDDE EIW K++GVP +HI R+G DDNFW +G TGPCGPCSEIY+D D GC D
Sbjct: 129 YLDDDETIEIW-KKLGVPDDHISRLGEDDNFWRAGPTGPCGPCSEIYFDQGEDFGCGSPD 187
Query: 231 LG---DDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETD 287
D RF+E++NLVF QY+ ++DG+ PL +KNIDTG+GLERIA ILQ V +NYETD
Sbjct: 188 CAPGCDCDRFLEYWNLVFTQYDGQEDGTFVPLPKKNIDTGMGLERIAAILQGVQSNYETD 247
Query: 288 LIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRL 347
++ ++ +L +Y + + +L+L+I+ DH RA+ ++++DG+ PSN GRGYV+RRL
Sbjct: 248 VLRSLVAVGEKLTGTTYGE-DAAIDLSLRIMADHSRAVAFMIADGILPSNEGRGYVLRRL 306
Query: 348 IRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREEL 407
+RRAV G LLG L+ FL ++ + L H+ ++ + + EE
Sbjct: 307 LRRAVMKGHLLG--------LDKPFLNDYVDEIVNLMGHVYPEIVENRELTRRVILSEEE 358
Query: 408 RFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHG 467
RF L +G LD+ LA+ G V L G AF L+DT+GFPVE+T+E+ +E G
Sbjct: 359 RFGANLRQGRAFLDEALAEL------EGEV--LPGDRAFTLHDTYGFPVEVTRELCDERG 410
Query: 468 VSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSA-----DLAEKIPDTEFLGYDTLSAKA 522
+ VDM+GF M+ QR +++AA+ + + ++ E + TEFLGY A+A
Sbjct: 411 IEVDMEGFGRCMDEQRERARAANTKDAEAAWSTYGGVMDEILEAVGPTEFLGYTKNDAEA 470
Query: 523 IVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVK 582
V +L+ +G V + G + V+L+ TPFYAE GGQIGD G L + A+V V
Sbjct: 471 RVLALVKDGVQVDVLEAGDEGRVVLDATPFYAEKGGQIGDAGVL------AKDDAIVAVL 524
Query: 583 DVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQE 642
D K+ + H + G L G V A +D R+R + +HTATH+L AL++V+G
Sbjct: 525 DTKEPEKGLIAHTVKVESGRLSAGDAVHAAIDVPRRERIRRNHTATHILHWALREVLGDH 584
Query: 643 TSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGA 702
QAGS VA RLRFDF + ++ E+ERL N I + + ++ +L A+ AG
Sbjct: 585 VKQAGSYVADSRLRFDFTHFEAMTAEQIVEVERLANQKIMENHPVRAYETSLASAREAGV 644
Query: 703 IAMFGEKYGEQVKI 716
+A+FGEKYGE V++
Sbjct: 645 MALFGEKYGEFVRV 658
>gi|205830048|sp|A0K6N4.2|SYA_BURCH RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
Length = 874
Score = 561 bits (1445), Expect = e-157, Method: Compositional matrix adjust.
Identities = 303/679 (44%), Positives = 428/679 (63%), Gaps = 44/679 (6%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR++FL F+ S+GH ++ S+SLVP DPT++ T +GM+QFK +FLG PR RA T+QR
Sbjct: 6 IREKFLKFFESKGHTIVRSSSLVPGNDPTLMFTNSGMVQFKDVFLGTDPRPYSRATTAQR 65
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AI++AWE T + LP ++LW
Sbjct: 66 SVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIKFAWELLTTVYQLPKDKLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYYDF 220
++VY++DDEA++IW KEVGVP E I R+G A DNFW G TGPCGPC+EI+YD
Sbjct: 126 VTVYQEDDEAYDIWAKEVGVPTERIIRIGDNKGARYASDNFWTMGDTGPCGPCTEIFYDH 185
Query: 221 HPD--RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQ 278
PD G D R+IE +NLVFMQ+N+ G++ L ++++DTG+GLER+A +LQ
Sbjct: 186 GPDVWGGPPGSPEEDGDRYIEIWNLVFMQFNRDAQGNMTRLPKQSVDTGMGLERLAAVLQ 245
Query: 279 KVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNI 338
V +NYE DL +IK A+ + +S D TN +LK+I DH+RA +L+ DGV P N
Sbjct: 246 HVHSNYEIDLFQNLIKAAARVTEIS-----DLTNNSLKVIADHIRACSFLIVDGVIPGNE 300
Query: 339 GRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRI 398
GRGYV+RR++RRA+R G LG KG F +A+ E+ T ++K EQR+
Sbjct: 301 GRGYVLRRIVRRAIRHGYKLGRKG-------AFFHKLVADLVAEMGTAY-PELKEAEQRV 352
Query: 399 LEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEI 458
+ L++EE RF +T+E G +L+ LA+ ++ G V L G+ AF L+DT+GFP+++
Sbjct: 353 TDVLRQEEERFFETIEHGMSILEAALAEVEAK---GGKV--LDGELAFKLHDTYGFPLDL 407
Query: 459 TKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTL 518
T +V E G++VD FD M QR Q++AA + L T F GY+ +
Sbjct: 408 TADVCRERGMTVDEPAFDDAMARQREQARAAGK-----FKATQGLEYSGAKTTFHGYEEI 462
Query: 519 S-AKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTA 577
+ A V +L V+G V +V G D V+L+ TPFYAESGGQ+GD G L N T
Sbjct: 463 AFDDAKVVALYVDGSAVNEVKAGQDAVVVLDHTPFYAESGGQVGDQGVL-----ANAATR 517
Query: 578 VVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKK 637
V D K V H GT+ +G L+VG + A +D + R R + +H+ATHL+ AL++
Sbjct: 518 FA-VADTLKVQADVIGHHGTLEQGTLKVGDVLRAEIDAQRRARTQRNHSATHLMHKALRE 576
Query: 638 VIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDA 697
V+G Q GSLV D+ RFDF + P+ D E+ +E+++N I +VM D+A
Sbjct: 577 VLGAHVQQKGSLVDADKTRFDFAHNAPMTDDEIRRVEQIVNNEILANAPGIVRVMPYDEA 636
Query: 698 KRAGAIAMFGEKYGEQVKI 716
+ GA+A+FGEKYG++V++
Sbjct: 637 VKGGAMALFGEKYGDEVRV 655
>gi|365835405|ref|ZP_09376825.1| alanine--tRNA ligase [Hafnia alvei ATCC 51873]
gi|364566167|gb|EHM43866.1| alanine--tRNA ligase [Hafnia alvei ATCC 51873]
Length = 875
Score = 561 bits (1445), Expect = e-157, Method: Compositional matrix adjust.
Identities = 313/692 (45%), Positives = 439/692 (63%), Gaps = 68/692 (9%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDFY S+GH+++ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFYHSKGHQIVESSSLVPNNDPTLLFTNAGMNQFKDVFLGIDKRSYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP +
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWFNLPKEK 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEAF IW EVGVP E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYETDDEAFNIWADEVGVPRERIIRIGDNKGAPFASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR------GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLER 272
D H D G ++ D GD R+IE +N+VFMQ+N++ DG++ PL + ++DTG+GLER
Sbjct: 188 D-HGDHIWGGPPGSAEED-GD--RYIEIWNIVFMQFNRQSDGTMLPLPKPSVDTGMGLER 243
Query: 273 IARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDG 332
IA +LQ V +NY+ DL +I +++ + D ++ +L++I DH+R+ +L+SDG
Sbjct: 244 IAAVLQHVNSNYDIDLFRTLIAATAKVTGAT-----DLSSKSLRVIADHIRSCAFLVSDG 298
Query: 333 VFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVK 392
V PSN GRGYV+RR+IRRAVR G ++G K F + IE+ ++K
Sbjct: 299 VLPSNEGRGYVLRRIIRRAVRHGNMVGAKE--------TFFYKLVAPLIEVMGPAADELK 350
Query: 393 AREQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTF 452
++ + + LK EE +F +TLERG LLD D LS+ S L G+ AF LYDT+
Sbjct: 351 RQQSMVEQVLKTEEEQFARTLERGLALLD----DELSKL----SGDTLDGETAFRLYDTY 402
Query: 453 GFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQ------AAHNAVKLSVDDSADLAEK 506
GFP+++T +V E + VD GF+ ME QRR+++ A +N++ + VD +
Sbjct: 403 GFPLDLTADVCRERNLKVDEIGFERAMEEQRRRARESSGFGADYNSM-IRVDGA------ 455
Query: 507 IPDTEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFL 566
++F GYD ++ V +L +G+ V ++ G + V+LN TPFYAESGGQ+GD G L
Sbjct: 456 ---SKFSGYDHNQQRSSVTALFRDGQAVDVLNAGEEGVVVLNETPFYAESGGQVGDKGEL 512
Query: 567 YVTQGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHT 626
T Q + V V D +K G H+G + +G ++VG VEAI+D R R +++H+
Sbjct: 513 -----TAQGVSFV-VTDTQK-YGQAIGHQGKVAQGSVKVGDSVEAIIDEARRSRIRLNHS 565
Query: 627 ATHLLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANL 686
ATHLL AAL++V+G SQ GSLV+ LRFDF+ + ++ ++E ++N +
Sbjct: 566 ATHLLHAALRQVLGDHVSQKGSLVSDRNLRFDFSHFEAMKPEQIRQVEDIVNAQVRRNLP 625
Query: 687 LQTKVMALDDAKRAGAIAMFGEKYGEQVKISS 718
++T +M L+DAK GA+A+FGEKY E V++ S
Sbjct: 626 IETNIMDLEDAKAKGAMALFGEKYDESVRVLS 657
>gi|289765898|ref|ZP_06525276.1| alanyl-tRNA synthetase [Fusobacterium sp. D11]
gi|289717453|gb|EFD81465.1| alanyl-tRNA synthetase [Fusobacterium sp. D11]
Length = 867
Score = 561 bits (1445), Expect = e-157, Method: Compositional matrix adjust.
Identities = 291/676 (43%), Positives = 433/676 (64%), Gaps = 39/676 (5%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
+G+ IR++F++F+ + HK SASL+P+DPT+LLT+AGM+ FKP FLG+ PR T
Sbjct: 3 TGNEIREKFIEFFMQKQHKHFESASLIPDDPTLLLTVAGMVPFKPYFLGQKEAPCPRVTT 62
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
Q+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFKKEAI+W+WEF T + ++LW+
Sbjct: 63 YQKCIRTNDLENVGRTARHHTFFEMLGNFSFGDYFKKEAIKWSWEFVTEVLKIDKDKLWV 122
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYD----FHPDR 224
+V+ DDEA +IW +E P E I RMG +N+W++G TG CGPCSEI+ D + D
Sbjct: 123 TVFTTDDEAEKIWTEECNFPKERIVRMGESENWWSAGPTGSCGPCSEIHVDLGVQYGGDE 182
Query: 225 GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNY 284
D G D RFIE +NLVF ++N+ +DGSLEPL +KNIDTG GLERIA ++Q NN+
Sbjct: 183 NSKIGDEGTDNRFIEIWNLVFTEWNRMEDGSLEPLPKKNIDTGAGLERIAAVVQGKTNNF 242
Query: 285 ETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVV 344
ETDL+FPI+++A ++ Y + N T+ +LK+I DH RA+ +L++DGV PSN GRGY++
Sbjct: 243 ETDLLFPILEEAGKITGSQYGK-NSETDFSLKVITDHARAVTFLINDGVIPSNEGRGYIL 301
Query: 345 RRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKR 404
RR++RRAVR GRLLG K F+ + +K +E D+K + I + ++
Sbjct: 302 RRILRRAVRHGRLLGYK--------DLFMYKMVDKVVEKFEVAYPDLKKNLENIRKIVRI 353
Query: 405 EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAE 464
EE +F TL++G +L++Q + + L+ + +L G+ +F LYDT+GFP E+T+E+AE
Sbjct: 354 EEEKFSNTLDQGMQLVNQEIDNLLANGKN-----KLDGEISFKLYDTYGFPYELTEEIAE 408
Query: 465 EHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPD----TEFLGYDTLSA 520
E GV+V + F+ +ME Q+ ++++A V DS EK D T+F GY+
Sbjct: 409 ERGVTVLREEFEAKMEEQKEKARSAREVVMEKGQDS--FIEKFYDKYGVTKFTGYEKTED 466
Query: 521 KAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVE 580
+ + SL + +K ++ ++TPFYAESGGQ+GD G ++ + +
Sbjct: 467 EGKLLSL--------REAKDGKYLLIFDKTPFYAESGGQVGDQGKIH------SDDFIGK 512
Query: 581 VKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIG 640
V DV+K +F+H +G+ E + + VD R +HTATHLL AL++V+G
Sbjct: 513 VLDVQKQ-KDIFIHTVEFEKGIAEENKTYKLEVDTVRRLDTAKNHTATHLLHKALREVVG 571
Query: 641 QETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRA 700
QAGSLV ++LRFDF+ + L +L +IE ++N I + + ++++AK+
Sbjct: 572 THVQQAGSLVDPEKLRFDFSHYEALTTEQLSKIEDIVNEKIREGVEVNISHHSIEEAKKL 631
Query: 701 GAIAMFGEKYGEQVKI 716
GA+ +FG+KYG+ V++
Sbjct: 632 GAMMLFGDKYGDVVRV 647
>gi|407785714|ref|ZP_11132861.1| alanyl-tRNA ligase [Celeribacter baekdonensis B30]
gi|407202664|gb|EKE72654.1| alanyl-tRNA ligase [Celeribacter baekdonensis B30]
Length = 883
Score = 561 bits (1445), Expect = e-157, Method: Compositional matrix adjust.
Identities = 311/684 (45%), Positives = 429/684 (62%), Gaps = 40/684 (5%)
Query: 46 FPSSGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVP 104
PS D IR FL+++ GHKV+ S+ LVP DPT++ T +GM+QFK F G R
Sbjct: 1 MPSVND-IRSTFLNYFERNGHKVVDSSPLVPRNDPTLMFTNSGMVQFKNCFTGVEKRDYV 59
Query: 105 RAATSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFG 160
RA T+Q+C+R ND++NVG T+RHHTFFEMLGNFSFGDYFK EAI +AWE T +F
Sbjct: 60 RATTAQKCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKNEAIPFAWELITKDFD 119
Query: 161 LPANRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDF 220
+P ++L+ +VY DDEAFEIW K+VGVP E I R+ DNFW G TGPCGPC+EI+YD
Sbjct: 120 IPKDKLYTTVYHTDDEAFEIW-KKVGVPEERIIRIATSDNFWQMGDTGPCGPCTEIFYD- 177
Query: 221 HPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARIL 277
H D G D RFIE +N+VFMQ K DG++ L ++IDTG+GLERIA +L
Sbjct: 178 HGDHIWGGPPGSPEEDGDRFIEIWNVVFMQNEKFADGTMTELDMQSIDTGMGLERIAALL 237
Query: 278 QKVPNNYETDLIFPIIKKASELANVS-YAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPS 336
Q +NY+TDL+ +I+ ++ +V Y N ++ ++I DHLR+ +L++DGV PS
Sbjct: 238 QGSHDNYDTDLMKALIEASAHATSVDPYGDKN----VHHRVIADHLRSTSFLIADGVMPS 293
Query: 337 NIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQ 396
N GRGYV+RR++RRA+R LLG K L + + E EL + +
Sbjct: 294 NEGRGYVLRRIMRRAMRHAHLLGAKDPIMYKLVPELVRQMGEAYPEL--------RQGQS 345
Query: 397 RILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPV 456
I E LK EE RF+ TL+RG KLLD+ LS E ++P G+ AF LYDT+GFP+
Sbjct: 346 MIEETLKLEETRFINTLDRGLKLLDE----ELSGLEEGANLP---GEAAFKLYDTYGFPL 398
Query: 457 EITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSA--DLAEKIPDTEFLG 514
++T++ E G +VD GFD M Q+ +++AA + + D + D+AE+ TEFLG
Sbjct: 399 DLTQDALREQGRAVDTAGFDAAMAEQKAKARAAWSGSGETADATVWYDIAEEHGVTEFLG 458
Query: 515 YDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQ 574
YDT SA+ V +L+ G V + G +V V++N+TPFY ESGGQ+GD G + V GT
Sbjct: 459 YDTESAEGQVLALVKGGGSVGSATAGDEVMVVVNQTPFYGESGGQVGDMGLIRVEGGT-- 516
Query: 575 QTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAA 634
V V D KK G VF+H G + G ++ G+ E IVD R + +H+ATHLL A
Sbjct: 517 ----VNVTDTKKVAG-VFIHIGKVTTGEIKTGQAAELIVDHARRTAIRANHSATHLLHEA 571
Query: 635 LKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMAL 694
L++ +G +Q GSL A DRLRFDF+ + L EL ++E +NG+I ++T++M
Sbjct: 572 LRETLGAHVAQRGSLNAPDRLRFDFSHTKGLSAEELRKVEEDVNGYIRQNTPVETRIMTP 631
Query: 695 DDAKRAGAIAMFGEKYGEQVKISS 718
DDA+ GA A+FGEKYG++V++ S
Sbjct: 632 DDARALGAQALFGEKYGDEVRVVS 655
>gi|116689431|ref|YP_835054.1| alanyl-tRNA synthetase [Burkholderia cenocepacia HI2424]
gi|116647520|gb|ABK08161.1| alanyl-tRNA synthetase [Burkholderia cenocepacia HI2424]
Length = 897
Score = 561 bits (1445), Expect = e-157, Method: Compositional matrix adjust.
Identities = 303/679 (44%), Positives = 428/679 (63%), Gaps = 44/679 (6%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR++FL F+ S+GH ++ S+SLVP DPT++ T +GM+QFK +FLG PR RA T+QR
Sbjct: 29 IREKFLKFFESKGHTIVRSSSLVPGNDPTLMFTNSGMVQFKDVFLGTDPRPYSRATTAQR 88
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AI++AWE T + LP ++LW
Sbjct: 89 SVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIKFAWELLTTVYQLPKDKLW 148
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYYDF 220
++VY++DDEA++IW KEVGVP E I R+G A DNFW G TGPCGPC+EI+YD
Sbjct: 149 VTVYQEDDEAYDIWAKEVGVPTERIIRIGDNKGARYASDNFWTMGDTGPCGPCTEIFYDH 208
Query: 221 HPD--RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQ 278
PD G D R+IE +NLVFMQ+N+ G++ L ++++DTG+GLER+A +LQ
Sbjct: 209 GPDVWGGPPGSPEEDGDRYIEIWNLVFMQFNRDAQGNMTRLPKQSVDTGMGLERLAAVLQ 268
Query: 279 KVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNI 338
V +NYE DL +IK A+ + +S D TN +LK+I DH+RA +L+ DGV P N
Sbjct: 269 HVHSNYEIDLFQNLIKAAARVTEIS-----DLTNNSLKVIADHIRACSFLIVDGVIPGNE 323
Query: 339 GRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRI 398
GRGYV+RR++RRA+R G LG KG F +A+ E+ T ++K EQR+
Sbjct: 324 GRGYVLRRIVRRAIRHGYKLGRKG-------AFFHKLVADLVAEMGTAY-PELKEAEQRV 375
Query: 399 LEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEI 458
+ L++EE RF +T+E G +L+ LA+ ++ G V L G+ AF L+DT+GFP+++
Sbjct: 376 TDVLRQEEERFFETIEHGMSILEAALAEVEAK---GGKV--LDGELAFKLHDTYGFPLDL 430
Query: 459 TKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTL 518
T +V E G++VD FD M QR Q++AA + L T F GY+ +
Sbjct: 431 TADVCRERGMTVDEPAFDDAMARQREQARAAGK-----FKATQGLEYSGAKTTFHGYEEI 485
Query: 519 S-AKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTA 577
+ A V +L V+G V +V G D V+L+ TPFYAESGGQ+GD G L N T
Sbjct: 486 AFDDAKVVALYVDGSAVNEVKAGQDAVVVLDHTPFYAESGGQVGDQGVL-----ANAATR 540
Query: 578 VVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKK 637
V D K V H GT+ +G L+VG + A +D + R R + +H+ATHL+ AL++
Sbjct: 541 FA-VADTLKVQADVIGHHGTLEQGTLKVGDVLRAEIDAQRRARTQRNHSATHLMHKALRE 599
Query: 638 VIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDA 697
V+G Q GSLV D+ RFDF + P+ D E+ +E+++N I +VM D+A
Sbjct: 600 VLGAHVQQKGSLVDADKTRFDFAHNAPMTDDEIRRVEQIVNNEILANAPGIVRVMPYDEA 659
Query: 698 KRAGAIAMFGEKYGEQVKI 716
+ GA+A+FGEKYG++V++
Sbjct: 660 VKGGAMALFGEKYGDEVRV 678
>gi|312880061|ref|ZP_07739861.1| alanyl-tRNA synthetase [Aminomonas paucivorans DSM 12260]
gi|310783352|gb|EFQ23750.1| alanyl-tRNA synthetase [Aminomonas paucivorans DSM 12260]
Length = 880
Score = 560 bits (1444), Expect = e-157, Method: Compositional matrix adjust.
Identities = 302/671 (45%), Positives = 428/671 (63%), Gaps = 25/671 (3%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQRC 112
+R++FL ++ +G + PS SLVP+DPT+L TIAGM+ FKP FLG +V RA T+Q+C
Sbjct: 9 LREQFLSYFEEKGSRRYPSFSLVPDDPTLLFTIAGMVPFKPYFLGLKTPEVTRATTAQKC 68
Query: 113 IRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWISVYE 172
+RTND++NVGRT+RHHTFFEMLGNFSFGDYFK E I WAW F T GL NR++ +VY
Sbjct: 69 VRTNDIDNVGRTARHHTFFEMLGNFSFGDYFKAEVIPWAWTFLTERVGLDPNRMYATVYR 128
Query: 173 DDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSDVDLG 232
DDDEA +IW VG+ + + R+G +DNFW +G GPCGPCSE+ YD P C D
Sbjct: 129 DDDEAADIWRNSVGLAADRVIRLGEEDNFWAAGPVGPCGPCSELLYDQGPAFSCGSPDCA 188
Query: 233 DDT---RFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDLI 289
R++E +NLVFMQ+N+ + G L PL +KNIDTG+GLER++ ++Q+V +++ETDL
Sbjct: 189 PGCSCDRYLEIWNLVFMQFNRDEAGVLTPLPKKNIDTGMGLERLSSVVQQVKSDFETDLF 248
Query: 290 FPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLIR 349
P++ KA LA VSY + ++L +++I DHLRA ++++DG+ PSN G GYV+RRL+R
Sbjct: 249 RPLVDKACSLAGVSYG-AGPGSDLAVRVIADHLRATAFMIADGILPSNEGTGYVLRRLLR 307
Query: 350 RAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELRF 409
RAVR GRLL ++ E L + + L+ ++ R I + + EE RF
Sbjct: 308 RAVRFGRLLDLR-------EPFLLELLPQVEATLADPYQELLRYRST-IAQVVDLEERRF 359
Query: 410 VQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGVS 469
+TLE+G LL+Q + T+ SG LSG+ AF LYDT+GFPVE+T+E+ E G+S
Sbjct: 360 GRTLEQGSDLLEQ----EIGCTKRSGG-KELSGEVAFELYDTYGFPVELTEEMCSEAGLS 414
Query: 470 VDMKGFDIEMENQRRQSQAAHNAVKLSVDDSA--DLAEKIPDTEFLGYDTLSAKAIVESL 527
VD KGF ME Q+ +++A+ ++ +A +LA++ T FLGY+ A+ V +L
Sbjct: 415 VDQKGFAQAMERQKERARASSKQTCATMGSNAYTELADRQGPTVFLGYEMEEARGTVLAL 474
Query: 528 LVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVKKS 587
L +G + + +G EV+L+RTPFYAE GGQ+GD G L + + EV+D
Sbjct: 475 LRDGVLLDRAEEGETAEVVLDRTPFYAERGGQVGDQGTL------SGEGLEAEVEDTVHP 528
Query: 588 LGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQAG 647
G + H+ IR+GVL G +EA VD R + HHT THLL AL +V+G QAG
Sbjct: 529 CGDLVAHRVRIRKGVLLPGATLEARVDGARRGDIRRHHTTTHLLHEALTQVLGDHVRQAG 588
Query: 648 SLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAMFG 707
SLV+ + LRFD+N PL +++E+E +N + + T+ L+ AK GA A+F
Sbjct: 589 SLVSPEGLRFDYNHFAPLTPEQIQEVEDRVNEQVLKNLPVTTRETDLETAKALGAKALFE 648
Query: 708 EKYGEQVKISS 718
EKYGE+V++ S
Sbjct: 649 EKYGERVRVVS 659
>gi|422016607|ref|ZP_16363189.1| alanyl-tRNA ligase [Providencia burhodogranariea DSM 19968]
gi|414092642|gb|EKT54316.1| alanyl-tRNA ligase [Providencia burhodogranariea DSM 19968]
Length = 875
Score = 560 bits (1444), Expect = e-157, Method: Compositional matrix adjust.
Identities = 300/683 (43%), Positives = 430/683 (62%), Gaps = 50/683 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ ++GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 8 IRQAFLDFFHTKGHQVVSSSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRAYSRATTAQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AI +AWE T + F LP +
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAINFAWELLTGKEWFNLPKEK 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VY DDEA+EIWNK VGVP E I R+G A DNFW G TGPCGPCSEI+Y
Sbjct: 128 LWVTVYATDDEAYEIWNKNVGVPAERIIRIGDNKGAAYASDNFWQMGDTGPCGPCSEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQSDGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ D+ +I A+ S+D +N +L++I DH+R+ +L+SDGV P
Sbjct: 247 VLQHVNSNYDIDIFRDLIAAAANATG-----SSDLSNKSLRVIADHIRSCAFLISDGVIP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN GRGYV+RR+IRRAVR G +LG K F + +++ + ++K ++
Sbjct: 302 SNEGRGYVLRRIIRRAVRHGYMLGAKD--------TFFYKLVAPLVKVMGNAADELKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG +LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 SKVEKALKAEEEQFARTLERGLQLLDEELASLKGDT--------LEGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGY 515
+++T +V E + VD +GF+ ME+QRR+++ + D L + +EF GY
Sbjct: 406 IDLTADVCRERNIKVDEEGFERAMEDQRRRARESSGFGA----DYNSLIKIEKHSEFSGY 461
Query: 516 DTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
A + ++ +G+PV ++ G + V+L++T FYAESGGQ+GD G L+ G+
Sbjct: 462 TYNEQLATITAIYKDGQPVDSLNAGDEGLVILDKTAFYAESGGQVGDTGILHNDSGS--- 518
Query: 576 TAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAAL 635
V D +K G H G + G L + ++A +D K R +++H+ATHLL AAL
Sbjct: 519 ---FTVTDTQK-YGQAIGHIGKVESGSLVINHRIDAKIDVKRRDAIRLNHSATHLLHAAL 574
Query: 636 KKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALD 695
++V+G+ +Q GSLV LRFDF+ + ++L E+E ++N I ++T++M L+
Sbjct: 575 RQVLGEHVAQKGSLVNDKYLRFDFSHFEAMTPSQLREVEDIVNTQIRKNTPIETELMDLE 634
Query: 696 DAKRAGAIAMFGEKYGEQVKISS 718
AK GA+A+FGEKY E+V++ S
Sbjct: 635 GAKAKGAMALFGEKYEERVRVLS 657
>gi|197284276|ref|YP_002150148.1| alanyl-tRNA synthetase [Proteus mirabilis HI4320]
gi|227357820|ref|ZP_03842168.1| alanyl-tRNA synthetase [Proteus mirabilis ATCC 29906]
gi|425073315|ref|ZP_18476421.1| alanyl-tRNA synthetase [Proteus mirabilis WGLW4]
gi|194681763|emb|CAR40964.1| alanyl-tRNA synthetase [Proteus mirabilis HI4320]
gi|227161930|gb|EEI46948.1| alanyl-tRNA synthetase [Proteus mirabilis ATCC 29906]
gi|404595293|gb|EKA95838.1| alanyl-tRNA synthetase [Proteus mirabilis WGLW4]
Length = 875
Score = 560 bits (1444), Expect = e-157, Method: Compositional matrix adjust.
Identities = 302/682 (44%), Positives = 430/682 (63%), Gaps = 52/682 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ ++GH+++PS+SLVP DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 8 IRQAFLDFFHTKGHQIVPSSSLVPNNDPTLLFTNAGMNQFKDVFLGLDNRPYSRATTAQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AI +AWE T + F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAINFAWELLTGKEWFNLPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VY DDEA++IWNKEVGVP E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYATDDEAYDIWNKEVGVPAERIIRIGDNKGAPFASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N+K DG+++PL + ++DTG+GLERI
Sbjct: 188 D-HGDHIWGGPPGTPEEDGDRYIEIWNIVFMQFNRKSDGTMDPLPKPSVDTGMGLERITA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +IK +E+ N + D N +L++I DH+R+ +L+ DGV P
Sbjct: 247 VLQHVNSNYDIDLFRALIKSVAEVTNAT-----DLANKSLRVIADHIRSCSFLVCDGVIP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN GRGYV+RR+IRRAVR G +LG K L + +AE EL +
Sbjct: 302 SNEGRGYVLRRIIRRAVRHGYMLGAKDTFFYKLVAPLIDVMAEAGKELKN---------Q 352
Query: 396 QRILEE-LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGF 454
Q I+E+ LK EE +F +TLERG +LLD+ L T L+G+ AF LYDT+GF
Sbjct: 353 QEIVEKVLKTEEEQFARTLERGLQLLDEELEKLTGDT--------LAGETAFRLYDTYGF 404
Query: 455 PVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLG 514
P+++T +V E + VD +GF++ ME QR++++ + D +L + ++F G
Sbjct: 405 PLDLTADVCRERNIKVDEEGFELAMEEQRKRARESSGFGT----DYNELIKVDSRSDFSG 460
Query: 515 YDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQ 574
YD + + ++ NG+ V ++ G + + L++T FYAESGGQ+GD G L G +
Sbjct: 461 YDHNEQQGTINAIFHNGQTVTELKAGEEGIIFLDKTAFYAESGGQVGDKGLLI---GKDS 517
Query: 575 QTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAA 634
Q V + + K++G H G + G V ++ A++D R +++H+ATHLL AA
Sbjct: 518 QFEVTDTQKYGKAIG----HIGKVISGSFIVNHKINAVIDVARRDAIRLNHSATHLLHAA 573
Query: 635 LKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMAL 694
L++V+G +Q GSLV LRFDF+ + +L EIE ++N I + + T++M L
Sbjct: 574 LRQVLGTHVTQKGSLVNDKYLRFDFSHFEAVKPEQLREIEDIVNAQIRLNSPVVTELMDL 633
Query: 695 DDAKRAGAIAMFGEKYGEQVKI 716
+DAK+ GA+A+FGEKY E+V++
Sbjct: 634 EDAKQKGAMALFGEKYEERVRV 655
>gi|90580351|ref|ZP_01236158.1| alanyl-tRNA synthetase [Photobacterium angustum S14]
gi|90438653|gb|EAS63837.1| alanyl-tRNA synthetase [Vibrio angustum S14]
Length = 874
Score = 560 bits (1444), Expect = e-157, Method: Compositional matrix adjust.
Identities = 306/686 (44%), Positives = 430/686 (62%), Gaps = 49/686 (7%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S D IR+ +L F+ S+GH+++ S+SLVP DPT+L T AGM QFK FLG R RA
Sbjct: 4 STDEIRRAYLAFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDTFLGLEKRSYTRAT 63
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
T+QRC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AI +AWEF T LPA
Sbjct: 64 TAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKHDAIAYAWEFLTSVLKLPA 123
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG--------ADDNFWNSGATGPCGPCSE 215
+RL ++VYE DDEAFEIWNKEVG+P + I R+G DNFW G TGPCGPC+E
Sbjct: 124 DRLVVTVYETDDEAFEIWNKEVGIPADRIVRIGDKKGGKPFESDNFWQMGDTGPCGPCTE 183
Query: 216 IYYDFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLER 272
I+YD H D G D RFIE +N VFMQ+N++ DG++EPL + ++DTG+G+ER
Sbjct: 184 IFYD-HGDHIWGGRPGTPEEDGDRFIEIWNNVFMQFNRQADGTMEPLPKPSVDTGMGIER 242
Query: 273 IARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDG 332
IA I+Q V +NYE D+ +IK+A+++ D +N +L+++ DH+R+ YL+SDG
Sbjct: 243 IAAIMQGVHSNYEIDIFQTLIKEAAKVIGFE-----DLSNQSLRVVADHIRSCAYLISDG 297
Query: 333 VFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVK 392
V PSN GRGYV+RR+IRRAVR G LG +GAF + E+ ++K
Sbjct: 298 VMPSNEGRGYVLRRIIRRAVRHGNKLGA--------QGAFFYKLVGPLAEIMGTAGEELK 349
Query: 393 AREQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTF 452
A+++ + + LK EE F +TL+RG +L++ L D L G V L G+ F LYDT+
Sbjct: 350 AQQELVEKVLKIEEDNFGRTLDRGLTILNEAL-DNL-----DGKV--LDGETVFKLYDTY 401
Query: 453 GFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEF 512
GFP ++T +VA E G ++D GF+ ME QR++++ A N VD + D + +TEF
Sbjct: 402 GFPADLTNDVARERGFTIDEDGFEAAMEEQRQRARDAGN---FGVDYN-DAIKVDAETEF 457
Query: 513 LGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGT 572
GY + + +L +G V V+ G + V+L TPFYAESGGQ GD G L
Sbjct: 458 CGYSATDGEGEIVALYRDGVAVDSVNAGEEALVVLTNTPFYAESGGQCGDSGIL------ 511
Query: 573 NQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQ 632
+ + V D +K G+ HKG + EG L VG+++ A VD R ++H+ATHL+
Sbjct: 512 TAEGVLFNVADTQK-FGAAIGHKGQVAEGTLTVGQKLTASVDSARRAAISLNHSATHLMH 570
Query: 633 AALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVM 692
AAL+ ++G+ +Q GSLV D LRFDF+ + +L +E ++N I + ++T +M
Sbjct: 571 AALRNILGEHVAQKGSLVKADGLRFDFSNLEAVKPEQLRAVETMVNDQIRANHAIETNIM 630
Query: 693 ALDDAKRAGAIAMFGEKYGEQVKISS 718
++ AK GA+A+FGEKY ++V++ S
Sbjct: 631 DIEAAKAKGAMALFGEKYDDEVRVLS 656
>gi|19704032|ref|NP_603594.1| alanyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
gi|22096188|sp|Q8RFJ8.1|SYA_FUSNN RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|19714224|gb|AAL94893.1| Alanyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
Length = 867
Score = 560 bits (1444), Expect = e-157, Method: Compositional matrix adjust.
Identities = 289/674 (42%), Positives = 432/674 (64%), Gaps = 35/674 (5%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
+G+ IR++F++F+ + HK SASL+P+DPT+LLT+AGM+ FKP FLG+ PR T
Sbjct: 3 TGNEIREKFIEFFMQKQHKHFESASLIPDDPTLLLTVAGMVPFKPYFLGQKEAPCPRVTT 62
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
Q+CIRTND+ENVGRT+RHHTFFEMLGNFSFG+YFKKEAI+W+WEF T + ++LW+
Sbjct: 63 YQKCIRTNDLENVGRTARHHTFFEMLGNFSFGNYFKKEAIKWSWEFVTEVLKINKDKLWV 122
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYD----FHPDR 224
+V+ DDEA +IW +E P E I RMG +N+W++G TG CGPCSEI+ D + D
Sbjct: 123 TVFTTDDEAEKIWIEECNFPKERIVRMGESENWWSAGPTGSCGPCSEIHVDLGIQYGGDE 182
Query: 225 GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNY 284
D G D RFIE +NLVF ++N+ +DGSLEPL +KNIDTG GLERIA ++Q NN+
Sbjct: 183 NSKIGDEGTDNRFIEIWNLVFTEWNRMEDGSLEPLPKKNIDTGAGLERIAAVVQGKTNNF 242
Query: 285 ETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVV 344
ETDL+FPI+++A ++ Y + N TN +LK+I DH RA+ +L++DGV PSN GRGY++
Sbjct: 243 ETDLLFPILEEAGKITGSQYGK-NPETNFSLKVITDHARAVTFLVNDGVIPSNEGRGYIL 301
Query: 345 RRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKR 404
RR++RRAVR GRLLG K F+ + +K +E D++ + I + +K
Sbjct: 302 RRILRRAVRHGRLLGYK--------DLFMYKMVDKVVEKFEIAYPDLRKNVENIRKIVKI 353
Query: 405 EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAE 464
EE +F TL++G +L++Q + + L+ + +L G+ +F LYDT+GFP E+T+E+AE
Sbjct: 354 EEEKFSNTLDQGIQLVNQEIDNLLTNGKN-----KLDGEISFKLYDTYGFPYELTEEIAE 408
Query: 465 EHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDS--ADLAEKIPDTEFLGYDTLSAKA 522
E GV V + F+ +ME Q+ ++++A V DS + +K TEF GY+ +
Sbjct: 409 ERGVIVLREEFEAKMEEQKEKARSAREVVMEKGQDSFIEEFYDKYGVTEFTGYEKTEDEG 468
Query: 523 IVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVK 582
+ SL + +K ++ ++TPFYAESGGQ+GD G +Y + V + K
Sbjct: 469 KLLSL--------REAKDRKYLLIFDKTPFYAESGGQVGDQGKIYSDNFAGKVLDVQKQK 520
Query: 583 DVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQE 642
D +F+H + +G+ E + + VD R +HTATHLL AL++++G
Sbjct: 521 D-------IFIHTVKLEKGMPEENKTYKLEVDVVKRLDTAKNHTATHLLHKALREIVGTH 573
Query: 643 TSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGA 702
QAGSLV ++LRFDF+ + L + +L +IE ++N I + + ++++AK+ GA
Sbjct: 574 VQQAGSLVDSEKLRFDFSHYEALTEEQLSKIEDIVNKKIREGIEVVVSHHSIEEAKKLGA 633
Query: 703 IAMFGEKYGEQVKI 716
+ +FG+KYG+ V++
Sbjct: 634 MMLFGDKYGDVVRV 647
>gi|218710534|ref|YP_002418155.1| alanyl-tRNA synthetase [Vibrio splendidus LGP32]
gi|218323553|emb|CAV19764.1| Alanyl-tRNA synthetase [Vibrio splendidus LGP32]
Length = 860
Score = 560 bits (1444), Expect = e-157, Method: Compositional matrix adjust.
Identities = 306/687 (44%), Positives = 429/687 (62%), Gaps = 51/687 (7%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S D +R FL F+ S+ H+++ S+SLVP DPT+L T AGM QFK FLG R RA
Sbjct: 4 STDEVRNAFLKFFESKEHQIVDSSSLVPHNDPTLLFTNAGMNQFKDCFLGAEKRAYTRAT 63
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
T+QRC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK+EAI +AWEF T GLP
Sbjct: 64 TAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEEAIGFAWEFLTETLGLPK 123
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG--------ADDNFWNSGATGPCGPCSE 215
+RL ++VYE DDEAFEIWNK+VG+P + I R+G DNFW G TGPCGPC+E
Sbjct: 124 DRLLVTVYETDDEAFEIWNKKVGIPADKIVRIGDKEGGKKFESDNFWTMGDTGPCGPCTE 183
Query: 216 IYYDF--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERI 273
I+YD H G D RFIE +N VFMQ+N+ DG++EPL + +DTG+G+ERI
Sbjct: 184 IFYDHGEHIWGGRPGTPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPAVDTGMGIERI 243
Query: 274 ARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGV 333
+ I+Q V +NYE D+ +IK +E+ +D +N +L++I DH+R+ +L++DGV
Sbjct: 244 SAIMQGVHSNYEIDVFQKLIKATAEVVG-----HDDLSNQSLRVIADHIRSCSFLIADGV 298
Query: 334 FPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKA 393
PSN GRGYV+RR+IRRAVR G +G +G L G + A EL
Sbjct: 299 MPSNEGRGYVLRRIIRRAVRHGNKIGAQGVFFHKLVGVLAEVMGSAAEELK--------- 349
Query: 394 REQRILEELKR-EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTF 452
++Q ++E++ R EE F +TLERG +L+ L DAL L G+ F LYDT+
Sbjct: 350 KQQELVEKVLRIEEENFGRTLERGMVILNDAL-DALEG-------KELDGETVFKLYDTY 401
Query: 453 GFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKI-PDTE 511
GFP ++T +VA E ++D GF+ ME QR++ A A + D +A + K+ +TE
Sbjct: 402 GFPADLTNDVARERDFTIDEAGFEKAMEAQRKR---AREAGQFGTDYNATI--KVDTNTE 456
Query: 512 FLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQG 571
F GY + +L V+G+ V +S G ++L TPFYAESGGQ GD G L G
Sbjct: 457 FCGYTGTEGAGEISALFVDGEEVSSLSAGDKAIIILEETPFYAESGGQCGDAGTLSTASG 516
Query: 572 TNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLL 631
+ +V+D +K LG+ F H G + EGV G +VEA VD + R ++H+ATHLL
Sbjct: 517 ------LFKVQDTQK-LGNAFSHHGELVEGVFAQGDKVEARVDAERRAAISLNHSATHLL 569
Query: 632 QAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKV 691
+AL++V+G+ +Q GSLV D LRFDF+ + +++E+ERL+N + ++++T +
Sbjct: 570 HSALREVLGEHVAQKGSLVKPDNLRFDFSNLEAVTPAQIKEVERLVNAQVRKNHVIETNI 629
Query: 692 MALDDAKRAGAIAMFGEKYGEQVKISS 718
M ++ AK GA+A+FGEKY ++V++ S
Sbjct: 630 MDIESAKEKGAMALFGEKYDDEVRVLS 656
>gi|410614977|ref|ZP_11326010.1| alanyl-tRNA synthetase [Glaciecola psychrophila 170]
gi|410165469|dbj|GAC39899.1| alanyl-tRNA synthetase [Glaciecola psychrophila 170]
Length = 865
Score = 560 bits (1444), Expect = e-157, Method: Compositional matrix adjust.
Identities = 302/673 (44%), Positives = 429/673 (63%), Gaps = 40/673 (5%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR FLDF+A++GH+ + S+SLVP DPT+L T AGM QFK +FLG R +A +SQR
Sbjct: 8 IRCAFLDFFAAKGHQKVSSSSLVPANDPTLLFTNAGMNQFKDVFLGSEARSYNKATSSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AW+F T E L ++L
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKTQAIQYAWDFLTEELKLSKDKLL 127
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDF--HPDRG 225
+++Y DDDEAF+IW+ ++G+ + I R+ DNFW+ G TGPCGPCSEI+YD H G
Sbjct: 128 VTIYHDDDEAFDIWSNQIGLSEDKIIRISTSDNFWSMGDTGPCGPCSEIFYDHGEHIWGG 187
Query: 226 CSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYE 285
D RFIE +NLVFMQ+N++ DG+++PL + +IDTG+GLERI ILQ V +NYE
Sbjct: 188 PPGSPEEDGDRFIEIWNLVFMQFNRQSDGTMQPLPKPSIDTGMGLERITAILQNVHSNYE 247
Query: 286 TDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVR 345
D+ +I+ A + ++DR + +L++I DH+R+ +L+ DG+ PSN GRGYV+R
Sbjct: 248 IDIFQNLIE-----ATANIVGTDDRQDKSLRVIADHIRSCSFLICDGIIPSNEGRGYVLR 302
Query: 346 RLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKRE 405
R+IRRAVR G LG G L A + E EL+ A + I + LK E
Sbjct: 303 RIIRRAVRHGNKLGASGVFFYRLVSALETQMGEAYPELT--------ANRELIEKVLKTE 354
Query: 406 ELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEE 465
E +F +TLERG +L+ L++ S VP G+ F LYDT+GFP ++T +VA E
Sbjct: 355 EEQFSRTLERGMSILNNALSELTSDV-----VP---GELVFKLYDTYGFPADLTNDVARE 406
Query: 466 HGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTLSAKAIVE 525
+S+D +GF M QR+++Q A D +L + +EF GYD L+ +A +
Sbjct: 407 KNLSIDEEGFQAAMAAQRKRAQQASQFDT----DYNELLKSNCASEFTGYDKLTNQAKIV 462
Query: 526 SLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVK 585
L NG+ V ++S + V+L+++PFYAESGGQ GD G L G V+D
Sbjct: 463 ELFANGQVVNQLSDAEEGIVVLDKSPFYAESGGQAGDTGVLKTANGN------FIVRDTV 516
Query: 586 KSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQ 645
K LG+ HKGT ++G V+A D + R+ K++H+ATHL+ AALK+++G+ +Q
Sbjct: 517 K-LGNAIAHKGTAHSD-FKLGDLVQAEFDVERREAIKLNHSATHLMHAALKQILGEHVNQ 574
Query: 646 AGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAM 705
GSLV+ +R RFDF+ + +T+L+ +E+L+N I ++L TK+M LD+AK AGA+A+
Sbjct: 575 KGSLVSDERFRFDFSHFEAVTNTQLQSVEKLVNQQIRANHVLDTKLMNLDEAKAAGAMAL 634
Query: 706 FGEKYGEQVKISS 718
FGEKY E V++ S
Sbjct: 635 FGEKYTEDVRVVS 647
>gi|148256734|ref|YP_001241319.1| alanyl-tRNA synthetase [Bradyrhizobium sp. BTAi1]
gi|205829994|sp|A5EML9.1|SYA_BRASB RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|146408907|gb|ABQ37413.1| alanyl-tRNA synthetase [Bradyrhizobium sp. BTAi1]
Length = 896
Score = 560 bits (1444), Expect = e-157, Method: Compositional matrix adjust.
Identities = 302/678 (44%), Positives = 425/678 (62%), Gaps = 35/678 (5%)
Query: 51 DSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATS 109
+ IR FL+F+A+ GH+++PS+ LVP DPT++ T AGM+QFK +F G R RA TS
Sbjct: 5 NEIRSTFLNFFAANGHEIVPSSPLVPRNDPTLMFTNAGMVQFKNVFTGVEKRPYHRATTS 64
Query: 110 QRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANR 165
Q+C+R ND++NVG T+RHHTFFEMLGNFSFGDYFK+ AI+ AW+ T EFGLP ++
Sbjct: 65 QKCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKENAIELAWKLVTKEFGLPKDK 124
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDR- 224
L +VY DDDEAF +W K G+P I R+ DNFW G TGPCGPCSEI+YD H D+
Sbjct: 125 LTATVYIDDDEAFGLWKKIAGLPESRIIRIAGSDNFWQMGDTGPCGPCSEIFYD-HGDKV 183
Query: 225 --GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPN 282
G D RFIE +NLVFMQY + + G PL + +IDTG GLER+A +LQ +
Sbjct: 184 WGGPPGSPEADGDRFIEIWNLVFMQYEQLEGGVRNPLPKPSIDTGAGLERVAAVLQGKHD 243
Query: 283 NYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGY 342
NY+ DL +I+ ++L N A +L++I DHLRA +L+SDGV PSN GRGY
Sbjct: 244 NYDIDLFVALIRAIADLTN---ADPQGPQKASLRVIADHLRASSFLISDGVLPSNEGRGY 300
Query: 343 VVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEEL 402
V+RR++RRA+R +LLG + L GA + + EL ++A E I E L
Sbjct: 301 VLRRIMRRAMRHAQLLGAREPLMHKLVGALTREMGQAYPEL-------IRA-EALIKETL 352
Query: 403 KREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEV 462
+ EE RF +TLERG +LD+ S T + G + G AF LYDT+GFP+++T++
Sbjct: 353 RLEETRFRKTLERGLAILDEK-----SSTLKKGDM--FDGDVAFTLYDTYGFPLDLTQDA 405
Query: 463 AEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSA--DLAEKIPDTEFLGYDTLSA 520
+ G+SVD F ME QR +++AA + ++ L EK+ TEFLGY+T +A
Sbjct: 406 LKSRGISVDQASFTDAMERQRAKARAAWAGSGEAATENVWFPLREKLGATEFLGYETETA 465
Query: 521 KAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVE 580
+ V +L+ +G V + G ++LN+TPFY ESGGQ+GD G + + V
Sbjct: 466 EGAVTALVKDGAEVEGLKAGESGAIVLNQTPFYGESGGQVGDTGVM------SGDGVRVR 519
Query: 581 VKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIG 640
+ D +K G +FVH GT+ +G L++G ++ VD R + +H+ATH+L AL++V+G
Sbjct: 520 ITDTQKKAGDLFVHIGTVEQGTLKLGAALQLEVDHGRRSAIRANHSATHILHEALRQVLG 579
Query: 641 QETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRA 700
+Q GSLV+ DRLRFDF +P+ EL +E + N + + + T++MALDDA+ A
Sbjct: 580 DHIAQRGSLVSPDRLRFDFAHPKPISAEELARVEDIANDVVLENAEVTTRLMALDDAREA 639
Query: 701 GAIAMFGEKYGEQVKISS 718
GA A+FGEKYG++V++ S
Sbjct: 640 GARALFGEKYGDEVRVVS 657
>gi|55981800|ref|YP_145097.1| alanyl-tRNA synthetase [Thermus thermophilus HB8]
gi|62296736|sp|P74941.2|SYA_THET8 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|55773213|dbj|BAD71654.1| alanyl-tRNA synthetase [Thermus thermophilus HB8]
Length = 882
Score = 560 bits (1444), Expect = e-157, Method: Compositional matrix adjust.
Identities = 317/679 (46%), Positives = 429/679 (63%), Gaps = 46/679 (6%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPED-PTVLLTIAGMLQFKPIFLGKVP----RQVPRAA 107
IR++FL F+ +GH LPS SL+PED P++L T AGM KP FLG P R+ R
Sbjct: 6 IREKFLSFFEGKGHLRLPSFSLIPEDDPSLLFTSAGMAPLKPYFLGAKPIFGGREWRRVT 65
Query: 108 TSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
T Q C+R D+ENVGRTSRH+T+FEMLGNFSFGDYFKKEAI WAWEF T L RLW
Sbjct: 66 TCQECLRVGDIENVGRTSRHNTYFEMLGNFSFGDYFKKEAILWAWEFLTEHLKLDPGRLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGA-----TGPCGPCSEIYYDFHP 222
++V+EDDDEA+EIW VGVP E I R G D+N+W GA GP GPCSEI+YD P
Sbjct: 126 VTVFEDDDEAYEIWRDLVGVPEERIGRFGEDENYWPGGAITHGPNGPSGPCSEIFYDRGP 185
Query: 223 DRGCSD---VDLGDDTRFIEFYNLVFMQYNKK----DDGSLEPLKQKNIDTGLGLERIAR 275
G D + G RF+E +NLVF QY+++ G L+PL QKNIDTG+GL R+A
Sbjct: 186 AYGTPDETGPNTGSGDRFVEIWNLVFTQYDRQGPIPGPGILKPLPQKNIDTGMGLYRVAA 245
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
ILQ V + Y TD FPII++ + ++ Y +T+++ ++I DH+RA+V LSDG
Sbjct: 246 ILQDVEDFYRTDTFFPIIQEVARMSGRPY---EGKTSVSHRVIADHVRAVVAALSDGATF 302
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN GRGYV+RRL+RRA+R G LLG L FL +A EL +++
Sbjct: 303 SNTGRGYVIRRLLRRALRHGYLLG--------LSDPFLHRLAPLVAELLGDFYPEMRENL 354
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
+ ++++ EE RF++TLE G K LD +L+ + G V L G++AF LYDT+GFP
Sbjct: 355 PAVEKQIRLEEERFLETLEGGLKRLDALLSGL-----KPGEV--LPGKEAFRLYDTYGFP 407
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKI----PDTE 511
+++T E+A E G VD +GF ME Q+ +S+AA + A + E++ TE
Sbjct: 408 LDLTVEIAAERGYGVDTEGFQKAMEEQQSRSRAAMAFEREIFKKGAQVLEELYAERGATE 467
Query: 512 FLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQG 571
FLGY+ L A+A V +LL + +++ G++V+V+L++TPFYAE GGQIGD+G L G
Sbjct: 468 FLGYNALEAEAEVLALLAGDQSLLEAGPGTEVQVVLDKTPFYAEGGGQIGDFGLLEWPGG 527
Query: 572 TNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLL 631
+ V+ +K+ +F+HK + EGVL VG V A+VDP+ R+ + +HTATHLL
Sbjct: 528 RAR------VETTRKTERGIFLHKARVEEGVLRVGERVRAVVDPR-RRDTERNHTATHLL 580
Query: 632 QAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKV 691
AAL+ V+G QAGSLVA DRLRFDF PL ELE +E L+N WI + +
Sbjct: 581 HAALRAVLGPHVRQAGSLVAPDRLRFDFTHPEPLKPEELERVELLVNRWIMADFPVTWRY 640
Query: 692 MALDDAKRAGAIAMFGEKY 710
M L++A++ GA+A+FGEKY
Sbjct: 641 MPLEEARKEGAMALFGEKY 659
>gi|336314149|ref|ZP_08569070.1| alanine--tRNA ligase [Rheinheimera sp. A13L]
gi|335881662|gb|EGM79540.1| alanine--tRNA ligase [Rheinheimera sp. A13L]
Length = 872
Score = 560 bits (1444), Expect = e-157, Method: Compositional matrix adjust.
Identities = 314/685 (45%), Positives = 437/685 (63%), Gaps = 55/685 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
+R+ FLDF+AS+GH+++ S+SL+P DPT+L T AGM+QFK +FLG+ R RA T+QR
Sbjct: 6 LRRAFLDFFASKGHQIVSSSSLIPGNDPTLLFTNAGMVQFKDVFLGQDKRSYNRAVTAQR 65
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AIQ+AWEF T LP +LW
Sbjct: 66 CLRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAIQYAWEFLTEVLKLPKEKLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYYDF 220
I+VY DDEAF+IW KE+GVP E R+G A DNFW G TGPCGPC+EI+YD
Sbjct: 126 ITVYATDDEAFDIWTKEMGVPAERAIRIGDNKGAPYASDNFWAMGDTGPCGPCTEIFYD- 184
Query: 221 HPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARIL 277
H D G D RFIE +N VFMQ+N+ DG +EPL + ++DTG+GLERIA IL
Sbjct: 185 HGDHIWGGPPGSPEEDGDRFIEIWNNVFMQFNRHADGRMEPLPKPSVDTGMGLERIAAIL 244
Query: 278 QKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSN 337
Q V +NYE D +IK +E+ + D + +L+++ DH+R+ +L++DGV PSN
Sbjct: 245 QNVHSNYEIDTFAALIKATAEITGAT-----DLNDKSLRVVADHIRSCSFLVADGVMPSN 299
Query: 338 IGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQR 397
GRGYV+RR+IRRA+R G LG KG L GA + E EL +Q
Sbjct: 300 EGRGYVLRRIIRRAIRHGNKLGAKGVFFSKLVGALAQQMGEAYPEL---------IEKQA 350
Query: 398 ILEE-LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPV 456
++E+ L EE +F +TLERG +L++ LAD T +P G+ AF LYDT+GFP+
Sbjct: 351 VIEKVLALEEEQFGKTLERGLGILEEALADLNGST----VIP---GEVAFKLYDTYGFPL 403
Query: 457 EITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPD---TEFL 513
++T +VA E G++VD GF+ ME QR+++Q A N AD + + T+F
Sbjct: 404 DLTSDVARERGLTVDQAGFEASMEAQRKRAQQASNF-------GADYNQALTSAQCTDFT 456
Query: 514 GYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTN 573
GY + KA V +L+ G V ++ G V+L++TPFYAESGGQ GD G L + G
Sbjct: 457 GYTQIQGKAKVVEILLEGNAVNALTDGQQALVILDQTPFYAESGGQSGDAGVLTLANG-- 514
Query: 574 QQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQA 633
AV V D K +G F HKG+++ G L +G V+A +D R+ + +H+ATHLL A
Sbjct: 515 ---AVFTVADTIK-VGKAFAHKGSLK-GALAIGDLVDAAIDNARREAIRKNHSATHLLHA 569
Query: 634 ALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMA 693
AL+ V+G+ +Q GSLV +RLRFDF+ + E+ IE+++N + + + T++M
Sbjct: 570 ALRTVLGEHVTQKGSLVGSERLRFDFSHFEAVKADEIRRIEQMVNEQVQQNHEVLTRLMN 629
Query: 694 LDDAKRAGAIAMFGEKYGEQVKISS 718
+D+AK AGA+A+FGEKY ++V++ S
Sbjct: 630 VDEAKAAGAMALFGEKYDDEVRVLS 654
>gi|354724863|ref|ZP_09039078.1| alanyl-tRNA synthetase [Enterobacter mori LMG 25706]
Length = 875
Score = 560 bits (1443), Expect = e-157, Method: Compositional matrix adjust.
Identities = 319/692 (46%), Positives = 441/692 (63%), Gaps = 68/692 (9%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQYAWELLTGENWFNLPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEAFEIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYETDDEAFEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR------GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLER 272
D H D G ++ D GD R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLER
Sbjct: 188 D-HGDHIWGGPPGSAEED-GD--RYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLER 243
Query: 273 IARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDG 332
IA +LQ V +NY+ DL +IK +E+ + D +N +L++I DH+R+ +L++DG
Sbjct: 244 IAAVLQHVNSNYDIDLFSTLIKSVAEVTGAT-----DLSNKSLRVIADHIRSCAFLIADG 298
Query: 333 VFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVK 392
V PSN RGYV+RR+IRRA+R G +LG K L G + + EL K
Sbjct: 299 VIPSNENRGYVLRRIIRRAIRHGNMLGAKDTFFYKLVGPLIGVMGAAGDEL--------K 350
Query: 393 AREQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTF 452
++ ++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+
Sbjct: 351 RQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLKGDT--------LDGETAFRLYDTY 402
Query: 453 GFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQ------AAHNAVKLSVDDSADLAEK 506
GFPV++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 403 GFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARESSGFGADYNAM-IRVDGA------ 455
Query: 507 IPDTEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFL 566
+EF GY+ L V +L V+GK V +S G D V+L++TPFYAESGGQ+GD G L
Sbjct: 456 ---SEFKGYEALELTGKVTALFVDGKAVDSISAGQDAVVILDKTPFYAESGGQVGDKGEL 512
Query: 567 YVTQGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHT 626
+G +V + + +++G H+G + G L+VG V+A VD R R +++H+
Sbjct: 513 ---KGNGFSFSVSDTQKYGQAIG----HQGKLVSGSLKVGEGVQANVDEARRARIRLNHS 565
Query: 627 ATHLLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANL 686
ATHL+ AAL+ V+G +Q GSLV LRFDF+ + +E+ +E L+N I
Sbjct: 566 ATHLMHAALRDVLGTHVAQKGSLVNDKVLRFDFSHFEAMKPSEIRAVEDLVNAQIRRNLP 625
Query: 687 LQTKVMALDDAKRAGAIAMFGEKYGEQVKISS 718
++T +M L+DAK+ GA+A+FGEKY ++V++ S
Sbjct: 626 IETHIMELEDAKKKGAMALFGEKYDDRVRVLS 657
>gi|401675024|ref|ZP_10807018.1| alanyl-tRNA synthetase [Enterobacter sp. SST3]
gi|400217481|gb|EJO48373.1| alanyl-tRNA synthetase [Enterobacter sp. SST3]
Length = 875
Score = 560 bits (1443), Expect = e-157, Method: Compositional matrix adjust.
Identities = 317/689 (46%), Positives = 436/689 (63%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQYAWELLTGENWFNLPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NYE DL +IK +E+ + D N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYEIDLFSTLIKAVAEVTGAT-----DLNNKSLRVIADHIRSCAFLIADGVIP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRA+R G +LG K L G + + EL K ++
Sbjct: 302 SNENRGYVLRRIIRRAIRHGNMLGAKDTFFYKLVGPLIGVMGSAGDEL--------KRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLKGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQ------AAHNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRARESSGFGADYNAM-IRVDSA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GY+ L V +L V+GK V +S G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYEALELTGKVTALFVDGKAVDSISAGQEAVVILDKTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G +V + + +++G H+G + G L+VG V+A VD R R +++H+ATH
Sbjct: 513 KGNGFSFSVTDTQKYGQAIG----HQGKLVSGSLKVGEGVQANVDEARRARIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL+ V+G +Q GSLV LRFDF+ + +E+ +E L+N I ++T
Sbjct: 569 LMHAALRDVLGTHVAQKGSLVNDKVLRFDFSHFEAMKPSEIRAVEDLVNAQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M L+DAK+ GA+A+FGEKY E+V++ S
Sbjct: 629 HIMDLEDAKKKGAMALFGEKYDERVRVLS 657
>gi|46199782|ref|YP_005449.1| alanyl-tRNA synthetase [Thermus thermophilus HB27]
gi|48428512|sp|P61707.1|SYA_THET2 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|46197409|gb|AAS81822.1| alanyl-tRNA synthetase [Thermus thermophilus HB27]
Length = 882
Score = 560 bits (1443), Expect = e-157, Method: Compositional matrix adjust.
Identities = 317/679 (46%), Positives = 429/679 (63%), Gaps = 46/679 (6%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPED-PTVLLTIAGMLQFKPIFLGKVP----RQVPRAA 107
IR++FL F+ +GH LPS SL+PED P++L T AGM KP FLG P R+ R
Sbjct: 6 IREKFLSFFEGKGHLRLPSFSLIPEDDPSLLFTSAGMAPLKPYFLGAKPIFGGREWRRVT 65
Query: 108 TSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
T Q C+R D+ENVGRTSRH+T+FEMLGNFSFGDYFKKEAI WAWEF T L RLW
Sbjct: 66 TCQECLRVGDIENVGRTSRHNTYFEMLGNFSFGDYFKKEAILWAWEFLTEHLRLDPGRLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGA-----TGPCGPCSEIYYDFHP 222
++V+EDDDEA+EIW VGVP E I R G D+N+W GA GP GPCSEI+YD P
Sbjct: 126 VTVFEDDDEAYEIWRDLVGVPEERIGRFGEDENYWPGGAITHGPNGPSGPCSEIFYDRGP 185
Query: 223 DRGCSD---VDLGDDTRFIEFYNLVFMQYNKK----DDGSLEPLKQKNIDTGLGLERIAR 275
G D + G RF+E +NLVF QY+++ G L+PL QKNIDTG+GL R+A
Sbjct: 186 AYGTPDETGPNTGSGDRFVEIWNLVFTQYDRQGPIPGPGILKPLPQKNIDTGMGLYRVAA 245
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
ILQ V + Y TD FPII++ + ++ Y +T+++ ++I DH+RA+V LSDG
Sbjct: 246 ILQDVEDFYRTDTFFPIIQEVARMSGRPY---EGKTSVSHRVIADHVRAVVAALSDGATF 302
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN GRGYV+RRL+RRA+R G LLG L FL +A EL +++
Sbjct: 303 SNTGRGYVIRRLLRRALRHGYLLG--------LSDPFLHRLAPLVAELLGDFYPEMRENL 354
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
+ ++++ EE RF++TLE G K LD +L+ + G V L G++AF LYDT+GFP
Sbjct: 355 PAVEKQIRLEEERFLETLEGGLKRLDALLSGL-----KPGEV--LPGKEAFRLYDTYGFP 407
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKI----PDTE 511
+++T E+A E G VD +GF ME Q+ +S+AA + A + E++ TE
Sbjct: 408 LDLTVEIAAERGYGVDTEGFQKAMEEQQSRSRAAMAFEREIFKKGAQVLEELYAERGATE 467
Query: 512 FLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQG 571
FLGY+ L A+A V +LL + +++ G++V+V+L++TPFYAE GGQIGD+G L G
Sbjct: 468 FLGYNALEAEAEVLALLAGDQSLLEAGPGTEVQVVLDKTPFYAEGGGQIGDFGLLEWPGG 527
Query: 572 TNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLL 631
+ V+ +K+ +F+HK + EGVL VG V A+VDP+ R+ + +HTATHLL
Sbjct: 528 RAR------VETTRKTERGIFLHKARVEEGVLRVGERVRAVVDPR-RRDTERNHTATHLL 580
Query: 632 QAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKV 691
AAL+ V+G QAGSLVA DRLRFDF PL ELE +E L+N WI + +
Sbjct: 581 HAALRAVLGPHVRQAGSLVAPDRLRFDFTHPEPLKPEELERVELLVNRWIMADFPVTWRY 640
Query: 692 MALDDAKRAGAIAMFGEKY 710
M L++A++ GA+A+FGEKY
Sbjct: 641 MPLEEARKEGAMALFGEKY 659
>gi|206559783|ref|YP_002230547.1| alanyl-tRNA synthetase [Burkholderia cenocepacia J2315]
gi|444363877|ref|ZP_21164251.1| alanine--tRNA ligase [Burkholderia cenocepacia BC7]
gi|444366514|ref|ZP_21166551.1| alanine--tRNA ligase [Burkholderia cenocepacia K56-2Valvano]
gi|198035824|emb|CAR51715.1| alanyl-tRNA synthetase [Burkholderia cenocepacia J2315]
gi|443594105|gb|ELT62782.1| alanine--tRNA ligase [Burkholderia cenocepacia BC7]
gi|443604481|gb|ELT72411.1| alanine--tRNA ligase [Burkholderia cenocepacia K56-2Valvano]
Length = 874
Score = 560 bits (1443), Expect = e-156, Method: Compositional matrix adjust.
Identities = 303/679 (44%), Positives = 427/679 (62%), Gaps = 44/679 (6%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR++FL F+ S+GH ++ S+SLVP DPT++ T +GM+QFK +FLG PR RA T+QR
Sbjct: 6 IREKFLKFFESKGHTIVRSSSLVPGNDPTLMFTNSGMVQFKDVFLGTDPRPYSRATTAQR 65
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AI++AWE T + LP +LW
Sbjct: 66 SVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIKFAWELLTAVYQLPKEKLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYYDF 220
++VY++DDEA++IW KEVGVP E I R+G A DNFW G TGPCGPC+EI+YD
Sbjct: 126 VTVYQEDDEAYDIWAKEVGVPTERIIRIGDNKGARYASDNFWTMGDTGPCGPCTEIFYDH 185
Query: 221 HPD--RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQ 278
PD G D R+IE +NLVFMQ+N+ G++ L ++++DTG+GLER+A +LQ
Sbjct: 186 GPDVWGGPPGSPEEDGDRYIEIWNLVFMQFNRDAQGNMTRLPKQSVDTGMGLERLAAVLQ 245
Query: 279 KVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNI 338
V +NYE DL +IK A+ + +S D TN +LK+I DH+RA +L+ DGV P N
Sbjct: 246 HVHSNYEIDLFQNLIKAAARVTEIS-----DLTNNSLKVIADHIRACSFLIVDGVIPGNE 300
Query: 339 GRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRI 398
GRGYV+RR++RRA+R G LG KG F +A+ E+ T ++K EQR+
Sbjct: 301 GRGYVLRRIVRRAIRHGYKLGRKG-------AFFHKLVADLVAEMGTAY-PELKEAEQRV 352
Query: 399 LEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEI 458
+ L++EE RF +T+E G +L+ LAD ++ G V L G+ AF L+DT+GFP+++
Sbjct: 353 TDVLRQEEERFFETIEHGMSILEAALADVDAK---GGKV--LDGELAFKLHDTYGFPLDL 407
Query: 459 TKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTL 518
T +V E G++VD FD M QR Q++AA + L T F GY+ +
Sbjct: 408 TADVCRERGMTVDEPAFDDAMARQREQARAAGK-----FKATQGLEYSGAKTTFHGYEEI 462
Query: 519 S-AKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTA 577
+ A V +L V+G V +V G D V+L+ TPFYAESGGQ+GD G L N T
Sbjct: 463 AFDDAKVVALYVDGSAVNEVKAGQDAVVVLDHTPFYAESGGQVGDQGVL-----ANAATR 517
Query: 578 VVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKK 637
V D K V H GT+ +G L+VG + A +D + R R + +H+ATHL+ AL++
Sbjct: 518 FA-VADTLKVQADVIGHHGTLEQGTLKVGDVLRAEIDAQRRARTQRNHSATHLMHKALRE 576
Query: 638 VIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDA 697
V+G Q GSLV ++ RFDF + P+ D E+ +E+++N I +VM D+A
Sbjct: 577 VLGAHVQQKGSLVDAEKTRFDFAHNAPMTDDEIRRVEQIVNNEILANAPGIVRVMPYDEA 636
Query: 698 KRAGAIAMFGEKYGEQVKI 716
+ GA+A+FGEKYG++V++
Sbjct: 637 VKGGAMALFGEKYGDEVRV 655
>gi|389805853|ref|ZP_10203000.1| alanyl-tRNA ligase [Rhodanobacter thiooxydans LCS2]
gi|388447094|gb|EIM03108.1| alanyl-tRNA ligase [Rhodanobacter thiooxydans LCS2]
Length = 875
Score = 560 bits (1443), Expect = e-156, Method: Compositional matrix adjust.
Identities = 312/680 (45%), Positives = 428/680 (62%), Gaps = 45/680 (6%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR FLD++ S+GH ++PS+SLVP DPT+L T +GM+ FK +FLG RAA QR
Sbjct: 6 IRSAFLDYFRSKGHTIVPSSSLVPASDPTLLFTNSGMVPFKNVFLGSEKLPYVRAADVQR 65
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
C+R ND++ VG T+RHHTFFEMLGN+SFGDYFK+EAI WAWE T F LPA++LW
Sbjct: 66 CLRAGGKHNDLDAVGYTARHHTFFEMLGNWSFGDYFKREAIAWAWELLTEVFRLPADKLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYYDF 220
++VY DDEAF+IWN++VGVP E I R+G A DNFW TGPCGPC+EI+YD
Sbjct: 126 VTVYHTDDEAFDIWNRQVGVPAERIVRIGDNKGAPYASDNFWQMADTGPCGPCTEIFYDH 185
Query: 221 HPDRGCSDVDLGDD--TRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQ 278
P D+ R+IE +NLVFMQ+++ DG+L PL +DTG+GLER+A +LQ
Sbjct: 186 GPGVAGGPPGSPDEDGDRYIEIWNLVFMQFDRAPDGTLSPLPAPCVDTGMGLERLAAVLQ 245
Query: 279 KVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNI 338
V +NYE DL +I+ A EL + D N +L++I DH+RA +L+ DGV PSN
Sbjct: 246 HVHSNYEIDLFAHLIRVAGELTG-----TKDLANKSLRVIADHIRACAFLIVDGVLPSNE 300
Query: 339 GRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRI 398
GRGYV+RR+IRRA+R G +LG++GD F + + +E H ++ ++ +
Sbjct: 301 GRGYVLRRIIRRALRHGWMLGVRGD--------FFWKMVQPLVEEMGHAYPELPVKQAFV 352
Query: 399 LEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEI 458
+ L+ EE RF +TLE G L D++ A +SG + + G DAF LYDT+GFPV++
Sbjct: 353 EDALRTEEQRFGETLEHGMHLFDEVAA-------KSGRI--IPGADAFRLYDTYGFPVDL 403
Query: 459 TKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTL 518
T ++A EHG+ VDM GF+ M QR +++AA + A+LA ++ T FLGY+ L
Sbjct: 404 TADIAREHGLEVDMAGFEQAMNEQRERARAA-GKFEAKGQMPAELASQLKPTAFLGYEAL 462
Query: 519 SAKAI-VESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTA 577
A+A V ++ G+ V ++ +G + V+L+RTPFYAESGGQ+GD G L +
Sbjct: 463 QAQASKVLGIVRGGRQVDQLGEGEEGLVILDRTPFYAESGGQVGDTGTL------SNPAG 516
Query: 578 VVEVKDVKKSLGSVFVHKGTIREGV-LEVGREVEAIVDPKLRQRAKVHHTATHLLQAALK 636
+EV D K G F H G G L G V+A VD RQ ++H+ATHLL AAL+
Sbjct: 517 CLEVGDTLKMGGVFFGHAGRWHGGQPLRTGDTVDAQVDASRRQSIVLNHSATHLLHAALR 576
Query: 637 KVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDD 696
KV+G Q GSLVA +RLRFDF H+P+ EL +E L+N I + + MA DD
Sbjct: 577 KVLGTHVVQKGSLVAPERLRFDFAHHKPVSHDELARVEALVNAEIRRNAAAEVRHMAYDD 636
Query: 697 AKRAGAIAMFGEKYGEQVKI 716
A GA+A+FGEKYG++V++
Sbjct: 637 AIAFGAMALFGEKYGDEVRM 656
>gi|415768598|ref|ZP_11483837.1| alanyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
D17P-2]
gi|444345601|ref|ZP_21153612.1| alanyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype c str. AAS4A]
gi|348657809|gb|EGY75390.1| alanyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
D17P-2]
gi|443542662|gb|ELT52970.1| alanyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype c str. AAS4A]
Length = 847
Score = 560 bits (1443), Expect = e-156, Method: Compositional matrix adjust.
Identities = 306/660 (46%), Positives = 415/660 (62%), Gaps = 50/660 (7%)
Query: 74 LVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQRCIRT----NDVENVGRTSRHH 128
+VPE DPT+L T AGM QFK +FLG R RA T+QRC+R ND+ENVG T+RHH
Sbjct: 1 MVPENDPTLLFTNAGMNQFKNVFLGLEKRPYSRATTAQRCVRAGGKHNDLENVGYTARHH 60
Query: 129 TFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANRLWISVYEDDDEAFEIWNKEVG 186
TFFEMLGNFSFGDYFK++AI + WEF T GLP RLW++VYE D+EA++IW+ E+G
Sbjct: 61 TFFEMLGNFSFGDYFKQDAIHFGWEFLTSPQWLGLPKERLWVTVYETDEEAYKIWHDEIG 120
Query: 187 VPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYYDFHPDR---GCSDVDLGDDTR 236
+ E I R+G A DNFW G TGPCGPC+EI+YD H D G D R
Sbjct: 121 IVAERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFYD-HGDHIWGGPPGSPEEDGDR 179
Query: 237 FIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDLIFPIIKKA 296
+IE +N+VFMQ+N+ DG++E L + ++DTG+GLERI+ +LQ V +NY+ D+ +I K
Sbjct: 180 YIEIWNIVFMQFNRHADGTMEKLPKPSVDTGMGLERISAVLQHVNSNYDIDIFQKLIAKT 239
Query: 297 SELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLIRRAVRTGR 356
+EL D TN +L++I DH+R+ YL+ DGV PSN GRGYV+RR+IRRAVR G
Sbjct: 240 AELTG-----EKDLTNKSLRVIADHIRSCAYLIVDGVVPSNEGRGYVLRRIIRRAVRHGH 294
Query: 357 LLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELRFVQTLERG 416
LLG AF + IE+ +VK + + + L+ EE +F +TLERG
Sbjct: 295 LLGAAE--------AFFYKLVPTLIEVMAQAGEEVKKHQATVEKLLRLEEEQFARTLERG 346
Query: 417 EKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGVSVDMKGFD 476
LLD+ LA+ + LSG+ AF LYDT+GFP+++T +V E G+++D GF+
Sbjct: 347 LTLLDEALAEVKGKV--------LSGEVAFKLYDTYGFPLDLTADVCRERGITIDEAGFE 398
Query: 477 IEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTLSAKAIVESLLVNGKPVIK 536
EMENQR ++Q+A D ++ T F GY A V +L +GKPV
Sbjct: 399 REMENQRLRAQSASQFGM----DYNNVIRVDGITRFEGYTESETLAKVTALFHDGKPVDT 454
Query: 537 VSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVKKSLGSVFVHKG 596
+S G V+L+ TPFYAESGGQIGD G L G N +VKD +K G VF H G
Sbjct: 455 ISSGQSAVVILDNTPFYAESGGQIGDIGRLE-GNGFN-----FDVKDTQK-YGQVFGHIG 507
Query: 597 TIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQAGSLVAFDRLR 656
+ +G L VG+ V A+VD RQR ++H+ATHLL AAL++V+G+ +Q GSLV+ LR
Sbjct: 508 ELTQGSLSVGQSVNAVVDEVRRQRISLNHSATHLLHAALRQVLGEHVAQKGSLVSDALLR 567
Query: 657 FDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAMFGEKYGEQVKI 716
FDF H P+ +L E+ER++N + N ++T +M L+ AK GA+A+FGEKY +QV++
Sbjct: 568 FDFAQHEPISKAQLAEVERIVNQQVRANNPIKTDIMELEAAKAKGAMALFGEKYSDQVRV 627
>gi|441504451|ref|ZP_20986445.1| Alanyl-tRNA synthetase [Photobacterium sp. AK15]
gi|441427918|gb|ELR65386.1| Alanyl-tRNA synthetase [Photobacterium sp. AK15]
Length = 874
Score = 560 bits (1443), Expect = e-156, Method: Compositional matrix adjust.
Identities = 303/685 (44%), Positives = 430/685 (62%), Gaps = 47/685 (6%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S D IR+ +L F+ S+GH+++ S+SLVP DPT+L T AGM QFK FLG R RA
Sbjct: 4 STDEIRRAYLAFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDTFLGLEKRSYTRAT 63
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
T+QRC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AI +AWEF T LP
Sbjct: 64 TAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKHDAINYAWEFLTDVLKLPQ 123
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG--------ADDNFWNSGATGPCGPCSE 215
+RL ++VYE DDEAF+IWNKEVG+P + I R+G DNFW G TGPCGPC+E
Sbjct: 124 DRLLVTVYETDDEAFDIWNKEVGIPADRIVRIGDKKGGKPYESDNFWQMGDTGPCGPCTE 183
Query: 216 IYYDF--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERI 273
I++D H G D RFIE +N VFMQ+N++ DG++EPL + ++DTG+G+ERI
Sbjct: 184 IFFDHGEHIWGGRPGTPEEDGDRFIEIWNNVFMQFNRQADGTMEPLPKPSVDTGMGIERI 243
Query: 274 ARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGV 333
A I+Q V +NYE D+ +IK+A+ A + Y +D +N +L+++ DH+R+ YL+ DGV
Sbjct: 244 AAIMQGVHSNYEIDIFQTLIKEAA--AVIGY---DDLSNQSLRVVADHIRSCAYLIVDGV 298
Query: 334 FPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKA 393
PSN GRGYV+RR+IRRAVR G LG K GAF + E+ ++K
Sbjct: 299 MPSNEGRGYVLRRIIRRAVRHGNKLGAK--------GAFFYKLVGPLAEIMGTAGVELKK 350
Query: 394 REQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFG 453
+++ + + LK EE F +TL+RG +L++ L + + L G+ F LYDT+G
Sbjct: 351 QQEMVEKVLKIEEDNFGRTLDRGMTILNEALDNLDGKV--------LDGETVFKLYDTYG 402
Query: 454 FPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFL 513
FP ++T +VA E G S+D +GF+ ME QR Q A A + VD + + + DT+F
Sbjct: 403 FPADLTNDVARERGFSIDEEGFNDAMEAQR---QRAREAGQFGVDYNEAIKVE-ADTDFC 458
Query: 514 GYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTN 573
GY + V +L +G+ V ++ G + V+LN TPFYAESGGQ GD G +
Sbjct: 459 GYSATEGEGDVVALFRDGEAVDSINAGEEALVVLNNTPFYAESGGQCGDTGVMTAA---- 514
Query: 574 QQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQA 633
+V D +K G+ HKG++ EG L+VG ++ A VD + R ++H+ATHLL A
Sbjct: 515 --GVKFDVADTQK-FGAAIGHKGSLVEGTLKVGDKLTATVDAERRASVSLNHSATHLLHA 571
Query: 634 ALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMA 693
AL+ ++G+ +Q GSLV D LRFDF+ + E+ E+ER++N I + ++T +M
Sbjct: 572 ALRNLLGEHVAQKGSLVKPDSLRFDFSHLEAVKPEEIREVERVVNDQIRLNHSIETNIMD 631
Query: 694 LDDAKRAGAIAMFGEKYGEQVKISS 718
++ AK GA+A+FGEKY ++V++ S
Sbjct: 632 IESAKAKGAMALFGEKYDDEVRVLS 656
>gi|205830263|sp|A7HWA5.2|SYA_PARL1 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
Length = 892
Score = 560 bits (1443), Expect = e-156, Method: Compositional matrix adjust.
Identities = 302/679 (44%), Positives = 433/679 (63%), Gaps = 40/679 (5%)
Query: 51 DSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATS 109
+ IR ++L+F+ ++GH+V+ S LVP DPT+L T AGM+ FK +F G+ R RAA+S
Sbjct: 5 NEIRSKYLEFFRAQGHEVVASGPLVPNNDPTLLFTNAGMVPFKNVFTGQETRPYKRAASS 64
Query: 110 QRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANR 165
Q+C+R ND++NVG T+RHHTFFEMLGNFSFGDY+K EAI++AW+ T E LP +R
Sbjct: 65 QKCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYYKAEAIEFAWDLITKELALPESR 124
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDR- 224
L +++YEDDDEA +W K G+ + I R+GA NFW G TGPCGP SEI+YD H D+
Sbjct: 125 LMVTIYEDDDEAHGLWKKITGLSDDKIVRLGAKSNFWQMGDTGPCGPNSEIFYD-HGDKI 183
Query: 225 -----GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQK 279
G D D GD RFIE +NLVFMQY + +DGS L + +IDTG+GLERIA +LQ
Sbjct: 184 PGGPPGSPDED-GD--RFIEIWNLVFMQYEQHEDGSRTRLPKPSIDTGMGLERIAAVLQG 240
Query: 280 VPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIG 339
+NY TDL+ +I ++E S + + ++ ++I DHLR+ +LL+DGV PSN G
Sbjct: 241 THDNYSTDLMRSLIVASAE---ASKSDPDGPHAVSHRVIADHLRSSSFLLADGVMPSNEG 297
Query: 340 RGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRIL 399
RGYV+RR++RRA+R +L+G+ L A + + + EL + E +
Sbjct: 298 RGYVLRRIMRRAMRHAQLVGVAEPLMWRLVPALVRQMGDAYPEL--------RRAEALVT 349
Query: 400 EELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEIT 459
E L+ EE RF +TL RG KLLD+ + G L+G+ AF LYDT+GFP+++T
Sbjct: 350 ETLRLEETRFRETLTRGLKLLDEEI-------ESLGGKGVLAGEVAFKLYDTYGFPLDLT 402
Query: 460 KEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSA--DLAEKIPDTEFLGYDT 517
++ G+SVD GFD M QR+ ++AA + ++ +L +K+ TEFLGY++
Sbjct: 403 QDALRSRGMSVDQTGFDEAMAKQRQDARAAWSGSGEKATEAVWFELRDKVGATEFLGYES 462
Query: 518 LSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTA 577
A+ V +LLV+G+PV KV G+D ++ N+TPFYAESGGQ+GD G ++ G A
Sbjct: 463 EIAEGKVVALLVDGQPVDKVEAGTDAALITNQTPFYAESGGQVGDTGIVFSADG-----A 517
Query: 578 VVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKK 637
V D K LG++ VH G + G L++G VE VD LR + +H+ATHLL AL++
Sbjct: 518 EFPVIDTMKKLGALHVHIGKLARGTLKLGDIVEMKVDKSLRDATRANHSATHLLHEALRR 577
Query: 638 VIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDA 697
V+G +Q GS+V +RLRFDF+ +P+ E+ E+E ++N I + T++M +DA
Sbjct: 578 VLGDHVTQKGSMVGPERLRFDFSHPKPMTPEEISEVETIVNRVIRQNAEVTTRLMTPEDA 637
Query: 698 KRAGAIAMFGEKYGEQVKI 716
AGA+A+FGEKYGE+V++
Sbjct: 638 IAAGALALFGEKYGEEVRV 656
>gi|399992716|ref|YP_006572956.1| alanyl-tRNA synthetase AlaS [Phaeobacter gallaeciensis DSM 17395 =
CIP 105210]
gi|398657271|gb|AFO91237.1| alanyl-tRNA synthetase AlaS [Phaeobacter gallaeciensis DSM 17395 =
CIP 105210]
Length = 883
Score = 560 bits (1443), Expect = e-156, Method: Compositional matrix adjust.
Identities = 309/683 (45%), Positives = 437/683 (63%), Gaps = 47/683 (6%)
Query: 51 DSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATS 109
+ IR FL+++A +GH+++ S+ LVP DPT++ +GM+QFK F G R RA TS
Sbjct: 5 NDIRSTFLNYFAKQGHEIVSSSPLVPRNDPTLMFANSGMVQFKNCFTGVETRDYKRATTS 64
Query: 110 QRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANR 165
Q+C+R ND++NVG T+RHHTFFEMLGNFSFGDYFK+EAI +AW+ T EFG+ +R
Sbjct: 65 QKCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKEEAIPFAWDLITKEFGIDKSR 124
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDR- 224
L +VY DDEAFEIW K+VGVP + I R+ DNFW G TGPCGPC+EI+YD H D
Sbjct: 125 LLTTVYHTDDEAFEIW-KKVGVPEDRIIRIDTSDNFWQMGPTGPCGPCTEIFYD-HGDHI 182
Query: 225 -----GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQK 279
G +D D GD RFIE +N+VFMQ + +DG+++ L ++IDTG+GLERI +LQ
Sbjct: 183 WGGPPGSADED-GD--RFIEIWNVVFMQNEQFEDGTMKALDMQSIDTGMGLERIGALLQG 239
Query: 280 VPNNYETDLIFPIIKKASELANVS-YAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNI 338
+NY+TDL +I+ ++++ NV Y N++ ++I DHLR+ +L++DGV PSN
Sbjct: 240 SHDNYDTDLFKALIEASADVTNVDPYGDQ----NVHHRVIADHLRSTSFLMADGVMPSND 295
Query: 339 GRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRI 398
GRGYV+RR++RRA+R LLG K L A + + EL R Q +
Sbjct: 296 GRGYVLRRIMRRAMRHAHLLGAKDPVMHRLVPALVQQMGAAYPEL---------GRAQPM 346
Query: 399 LEE-LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVE 457
+EE L +EE RF QTL+RG KLLD D LS E +P G AF LYDTFGFP++
Sbjct: 347 IEETLHQEETRFKQTLDRGLKLLD----DELSGLDEGAPLP---GAAAFKLYDTFGFPLD 399
Query: 458 ITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSA--DLAEKIPDTEFLGY 515
+T++ E G +VD GFD M Q+ +++AA + S D + D+A++ T+FLGY
Sbjct: 400 LTQDALREKGRTVDTDGFDSAMAEQKAKARAAWSGSGESADSTIWFDVADQAGTTDFLGY 459
Query: 516 DTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
+T +A+ + +L+V+G V + G+DV+V+LN+TPFYAESGGQ+GD G + V G
Sbjct: 460 ETEAAEGQIMALVVDGAQVAEAGVGTDVQVVLNQTPFYAESGGQVGDSGEIRVDGG---- 515
Query: 576 TAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAAL 635
VV V D KK+ G VF+H G + G++ G + VD R + +H+ATHLL AL
Sbjct: 516 --VVRVTDTKKAAG-VFIHFGKVESGMITKGAAAQLEVDHLRRSAIRANHSATHLLHEAL 572
Query: 636 KKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALD 695
++ +G +Q GSL A DRLRFDF+ ++ L EL + +N +I +++T++M D
Sbjct: 573 REALGDHVAQRGSLNADDRLRFDFSHNKALSGEELRRVAVDVNRFIRQNTVVETRIMTPD 632
Query: 696 DAKRAGAIAMFGEKYGEQVKISS 718
DA+ GA A+FGEKYG++V++ S
Sbjct: 633 DARALGAQALFGEKYGDEVRVVS 655
>gi|425067172|ref|ZP_18470288.1| alanyl-tRNA synthetase [Proteus mirabilis WGLW6]
gi|404601467|gb|EKB01876.1| alanyl-tRNA synthetase [Proteus mirabilis WGLW6]
Length = 875
Score = 560 bits (1443), Expect = e-156, Method: Compositional matrix adjust.
Identities = 302/682 (44%), Positives = 430/682 (63%), Gaps = 52/682 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ ++GH+++PS+SLVP DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 8 IRQAFLDFFHTKGHQIVPSSSLVPNNDPTLLFTNAGMNQFKDVFLGLDNRPYSRATTAQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AI +AWE T + F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAINFAWELLTGKEWFNLPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VY DDEA++IWNKEVGVP E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYATDDEAYDIWNKEVGVPAERIIRIGDNKGAPFASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N+K DG+++PL + ++DTG+GLERI
Sbjct: 188 D-HGDHIWGGPPGTPEEDGDRYIEIWNIVFMQFNRKSDGTMDPLPKPSVDTGMGLERITA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +IK +E+ N + D N +L++I DH+R+ +L+ DGV P
Sbjct: 247 VLQHVNSNYDIDLFRALIKSVAEVTNAT-----DLANKSLRVIADHIRSCSFLVCDGVIP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN GRGYV+RR+IRRAVR G +LG K L + +AE EL +
Sbjct: 302 SNEGRGYVLRRIIRRAVRHGYMLGAKDTFFYKLVAPLIDVMAEAGKELKN---------Q 352
Query: 396 QRILEE-LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGF 454
Q I+E+ LK EE +F +TLERG +LLD+ L T L+G+ AF LYDT+GF
Sbjct: 353 QEIVEKVLKTEEEQFARTLERGLQLLDEELEKLTGDT--------LAGETAFRLYDTYGF 404
Query: 455 PVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLG 514
P+++T +V E + VD +GF++ ME QR++++ + D +L + ++F G
Sbjct: 405 PLDLTADVCRERNIKVDEEGFELAMEEQRKRARESSGFGT----DYNELIKVDSRSDFSG 460
Query: 515 YDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQ 574
YD + + ++ NG+ V ++ G + + L++T FYAESGGQ+GD G L G +
Sbjct: 461 YDHNEQQGTINAIFHNGQTVTELKAGEEGIIFLDKTAFYAESGGQVGDKGLLI---GKDS 517
Query: 575 QTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAA 634
Q V + + K++G H G + G V ++ AI+D R +++H+ATHLL AA
Sbjct: 518 QFEVTDTQKYGKAIG----HIGKVISGSFIVNHKINAIIDVARRDAIRLNHSATHLLHAA 573
Query: 635 LKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMAL 694
L++V+G +Q GSLV LRFDF+ + +L EIE ++N I + + T++M L
Sbjct: 574 LRQVLGTHVTQKGSLVNDKYLRFDFSHFEAVKPEQLREIEDIVNAQIRLNSPVVTELMDL 633
Query: 695 DDAKRAGAIAMFGEKYGEQVKI 716
++AK+ GA+A+FGEKY E+V++
Sbjct: 634 EEAKQKGAMALFGEKYEERVRV 655
>gi|359455991|ref|ZP_09245195.1| alanyl-tRNA synthetase [Pseudoalteromonas sp. BSi20495]
gi|358046962|dbj|GAA81444.1| alanyl-tRNA synthetase [Pseudoalteromonas sp. BSi20495]
Length = 866
Score = 560 bits (1443), Expect = e-156, Method: Compositional matrix adjust.
Identities = 304/673 (45%), Positives = 429/673 (63%), Gaps = 44/673 (6%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR++FLDF+AS+ H+++PS+SL+P D T+L AGM+QFK +FLG R RA +SQR
Sbjct: 9 IRQQFLDFFASKQHQIVPSSSLIPGNDATLLFNNAGMVQFKDVFLGAESRPYTRATSSQR 68
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI++AWEF T LP +L
Sbjct: 69 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAIKFAWEFLTEVVKLPQEKLL 128
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDF--HPDRG 225
+++Y DD+EAFE W+K++G+ + I R+ DNFW+ G TGPCGPCSEI+YD H G
Sbjct: 129 VTIYHDDEEAFEYWSKDIGLSEDRIIRIATSDNFWSMGDTGPCGPCSEIFYDHGEHIWGG 188
Query: 226 CSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYE 285
D RFIE +NLVFMQYN++ DG++ PL ++++DTG+GLERI+ ILQ V +NYE
Sbjct: 189 PPGTPEEDGDRFIEIWNLVFMQYNRQSDGTMLPLPKQSVDTGMGLERISAILQGVHSNYE 248
Query: 286 TDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVR 345
DL +I A+ + N + D + +L+++ DH+R+ +L+SDGV PSN GRGYV+R
Sbjct: 249 IDLFQGLIAAAASVTN-----AQDMDDKSLRVVADHIRSCAFLISDGVMPSNEGRGYVLR 303
Query: 346 RLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKR- 404
R+IRRAVR G LG +G L A + + + EL A++Q I+E++ R
Sbjct: 304 RIIRRAVRHGNKLGAQGSFFYKLVAALIEQMGQAYPEL---------AKQQEIIEKVLRI 354
Query: 405 EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAE 464
EE +F +TLERG +L++ L+D G + + G F LYDT+GFP ++T +VA
Sbjct: 355 EEEQFGKTLERGLAILEESLSDL------KGDI--IPGDLVFKLYDTYGFPADLTADVAR 406
Query: 465 EHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADL-AEKIPDTEFLGYDTLSAKAI 523
E +++D +GF+ M QR+ +Q A K D + L +EK+ TEF GYD+ A
Sbjct: 407 ERQMTIDHQGFEECMAVQRKTAQ---QAGKFGADYNEQLKSEKL--TEFKGYDSTHHSAT 461
Query: 524 VESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKD 583
V + G+ V + G V+L+RTPFYAESGGQ GD G + V G T +
Sbjct: 462 VVEIFAGGEAVQLLEDGQQGIVVLDRTPFYAESGGQTGDTGTITVAGGEFNVTNTTK--- 518
Query: 584 VKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQET 643
LG+ F H GT+ +G + V +V+A +D R K +HTATH+L AL++++G
Sbjct: 519 ----LGNAFAHHGTV-QGRIGVNDKVDATIDDARRDSIKKNHTATHILHEALRQLLGDHV 573
Query: 644 SQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAI 703
Q GSLV DRLRFDF+ + EL EIER++N I L T++MA+DDAK GA+
Sbjct: 574 GQKGSLVQPDRLRFDFSHFEAVTKDELREIERVVNDEIRRNFALNTELMAIDDAKAKGAM 633
Query: 704 AMFGEKYGEQVKI 716
A+FGEKY ++V++
Sbjct: 634 ALFGEKYDDEVRV 646
>gi|29833392|ref|NP_828026.1| alanyl-tRNA synthetase [Streptomyces avermitilis MA-4680]
gi|41018194|sp|Q827S4.1|SYA_STRAW RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|29610515|dbj|BAC74561.1| putative alanyl-tRNA synthetase [Streptomyces avermitilis MA-4680]
Length = 890
Score = 560 bits (1443), Expect = e-156, Method: Compositional matrix adjust.
Identities = 299/678 (44%), Positives = 426/678 (62%), Gaps = 33/678 (4%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQRC 112
IR+R+L FY RGH V+PSASL+ +DPT+LL AGM+ FKP FLG+V PRA + Q+C
Sbjct: 6 IRRRWLSFYEERGHTVVPSASLIADDPTLLLVPAGMVPFKPYFLGEVKPPWPRATSVQKC 65
Query: 113 IRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE-----FGLPANRLW 167
+RT D+E VG+T+RH TFF+M GNFSFGDYFK+ AI +AWE T +GL RLW
Sbjct: 66 VRTPDIEEVGKTTRHGTFFQMCGNFSFGDYFKEGAITYAWELLTTPQDKGGYGLDPERLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCS 227
I+VY DDDEA IW ++GVP E I+R+G DN+W+ G GPCGPCSEI YD P+ G
Sbjct: 126 ITVYLDDDEAETIWRDKIGVPAERIQRLGKKDNYWSMGVPGPCGPCSEINYDRGPEFGVE 185
Query: 228 DVDLGDDTRFIEFYNLVFMQYNK-----KDDGS-LEPLKQKNIDTGLGLERIARILQKVP 281
+D R++E +NLVFMQY + KDD L L QKNIDTGLG+ER+A ILQ V
Sbjct: 186 GGPAVNDERYVEIWNLVFMQYERGEGTSKDDFEILGDLPQKNIDTGLGMERLAMILQGVQ 245
Query: 282 NNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRG 341
N YE D +I+KA+EL V Y ++ ++++L+++ DH+R V L+ DGV P N GRG
Sbjct: 246 NMYEIDTSMAVIQKATELTGVEYGAAHG-SDVSLRVVTDHMRTSVMLIGDGVTPGNEGRG 304
Query: 342 YVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEE 401
YV+RR++RRA+R RLLG G +L + + ++ EL + QRI
Sbjct: 305 YVLRRIMRRAIRNMRLLGATGPVVKDLVDVVIAMMGQQYPELISD--------RQRIETV 356
Query: 402 LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKE 461
EE F++TL+ G +LD A++ T+ SG L G AFLL+DT+GFP+++T E
Sbjct: 357 ALAEEAAFLKTLKAGTNILDT----AVTETKASGG-QVLPGDKAFLLHDTWGFPIDLTLE 411
Query: 462 VAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSA---DLAEKIPDTEFLGYDTL 518
+A E G+SVD GF M+ QR +++A + K D ++A+ +T+F+GY
Sbjct: 412 MAAEQGLSVDEDGFRRLMKEQRERAKADAQSKKTGHADLGAYREIADAAGETDFIGYTQT 471
Query: 519 SAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAV 578
++ + +LV+G ++G +VE++L+RTPFYAE GGQIGD G + V G A+
Sbjct: 472 EGESTIVGILVDGVSSPAATEGDEVEIVLDRTPFYAEGGGQIGDTGRIKVESG-----AI 526
Query: 579 VEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKV 638
+EV+D +K + V+VHKG ++ G + VG + + +D + R+ H+ATHL AL+
Sbjct: 527 IEVRDCQKPVPGVYVHKGVVQVGEVTVGAKAQVSIDVRRRKAIARAHSATHLTHQALRDA 586
Query: 639 IGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAK 698
+G +QAGS R RFDF + T + ++E+ IN + +Q +VM++D+AK
Sbjct: 587 LGPTAAQAGSENQPGRFRFDFGSPSAVPTTVMTDVEQQINEVLARDLDVQAEVMSIDEAK 646
Query: 699 RAGAIAMFGEKYGEQVKI 716
+ GAIA FGEKYGE+V++
Sbjct: 647 KQGAIAEFGEKYGERVRV 664
>gi|421869092|ref|ZP_16300734.1| Alanyl-tRNA synthetase [Burkholderia cenocepacia H111]
gi|358070913|emb|CCE51612.1| Alanyl-tRNA synthetase [Burkholderia cenocepacia H111]
Length = 874
Score = 560 bits (1443), Expect = e-156, Method: Compositional matrix adjust.
Identities = 303/679 (44%), Positives = 427/679 (62%), Gaps = 44/679 (6%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR++FL F+ S+GH ++ S+SLVP DPT++ T +GM+QFK +FLG PR RA T+QR
Sbjct: 6 IREKFLKFFESKGHTIVRSSSLVPGNDPTLMFTNSGMVQFKDVFLGTDPRPYSRATTAQR 65
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AI++AWE T + LP +LW
Sbjct: 66 SVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIKFAWELLTTVYQLPKEKLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYYDF 220
++VY++DDEA++IW KEVGVP E I R+G A DNFW G TGPCGPC+EI+YD
Sbjct: 126 VTVYQEDDEAYDIWAKEVGVPTERIIRIGDNKGARYASDNFWTMGDTGPCGPCTEIFYDH 185
Query: 221 HPD--RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQ 278
PD G D R+IE +NLVFMQ+N+ G++ L ++++DTG+GLER+A +LQ
Sbjct: 186 GPDVWGGPPGSPEEDGDRYIEIWNLVFMQFNRDAQGNMTRLPKQSVDTGMGLERLAAVLQ 245
Query: 279 KVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNI 338
V +NYE DL +IK A+ + +S D TN +LK+I DH+RA +L+ DGV P N
Sbjct: 246 HVHSNYEIDLFQNLIKAAARVTEIS-----DLTNNSLKVIADHIRACSFLIVDGVIPGNE 300
Query: 339 GRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRI 398
GRGYV+RR++RRA+R G LG KG F +A+ E+ T ++K EQR+
Sbjct: 301 GRGYVLRRIVRRAIRHGYKLGRKG-------AFFHKLVADLVAEMGTAY-PELKEAEQRV 352
Query: 399 LEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEI 458
+ L++EE RF +T+E G +L+ LAD ++ G V L G+ AF L+DT+GFP+++
Sbjct: 353 TDVLRQEEERFFETIEHGMSILEAALADVDAK---GGKV--LDGELAFKLHDTYGFPLDL 407
Query: 459 TKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTL 518
T +V E G++VD FD M QR Q++AA + L T F GY+ +
Sbjct: 408 TADVCRERGMTVDEPAFDDAMARQREQARAAGK-----FKATQGLEYSGAKTTFHGYEEI 462
Query: 519 S-AKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTA 577
+ A V +L V+G V +V G D V+L+ TPFYAESGGQ+GD G L N T
Sbjct: 463 AFDDAKVVALYVDGSAVNEVKAGQDAVVVLDHTPFYAESGGQVGDQGVL-----ANAATR 517
Query: 578 VVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKK 637
V D K V H GT+ +G L+VG + A +D + R R + +H+ATHL+ AL++
Sbjct: 518 FA-VADTLKVQADVIGHHGTLEQGTLKVGDVLRAEIDAQRRARTQRNHSATHLMHKALRE 576
Query: 638 VIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDA 697
V+G Q GSLV ++ RFDF + P+ D E+ +E+++N I +VM D+A
Sbjct: 577 VLGAHVQQKGSLVDAEKTRFDFAHNAPMTDDEIRRVEQIVNNEILANAPGIVRVMPYDEA 636
Query: 698 KRAGAIAMFGEKYGEQVKI 716
+ GA+A+FGEKYG++V++
Sbjct: 637 VKGGAMALFGEKYGDEVRV 655
>gi|333985511|ref|YP_004514721.1| alanyl-tRNA synthetase [Methylomonas methanica MC09]
gi|333809552|gb|AEG02222.1| alanyl-tRNA synthetase [Methylomonas methanica MC09]
Length = 869
Score = 560 bits (1442), Expect = e-156, Method: Compositional matrix adjust.
Identities = 310/671 (46%), Positives = 427/671 (63%), Gaps = 38/671 (5%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
+R FL+F+ GH V PS+SLVP DPT+L T AGM+QFK +FLG+ RAATSQR
Sbjct: 9 LRAAFLEFFRQHGHAVRPSSSLVPGNDPTLLFTNAGMVQFKDVFLGREKTDFTRAATSQR 68
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFKKEAI +AW+F T E G+PA RLW
Sbjct: 69 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKKEAIHYAWDFLTKELGIPAERLW 128
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDF--HPDRG 225
++V+ +D EA IW ++V V R+GA DNFW+ G GPCGPC+EI+YD H G
Sbjct: 129 VTVFNEDSEAEAIWLEDVKVDPNRFSRIGAKDNFWSMGDVGPCGPCTEIFYDHGEHVAGG 188
Query: 226 CSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYE 285
D R+IE +NLVFMQY++ DG+L PL ++DTG+GLERIA +LQ V +NYE
Sbjct: 189 PPGSPDEDGDRYIEVWNLVFMQYDRDKDGNLTPLPAPSVDTGMGLERIAAVLQGVHSNYE 248
Query: 286 TDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVR 345
DL ++K A++LA + D N +L++I DH+R+ ++++DGV PSN GRGYV+R
Sbjct: 249 IDLFQNLLKVAAKLAG-----TTDLNNSSLRVIADHIRSCAFMVADGVLPSNEGRGYVLR 303
Query: 346 RLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKRE 405
R+IRRA+R G LGI+ E F +A E+ KA+EQ + LK+E
Sbjct: 304 RIIRRAIRHGYRLGIR-------EVFFYQLVAPLVTEMGQAYPELAKAQEQ-VERVLKKE 355
Query: 406 ELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEE 465
E RF +TLE+G K+L+ +A + G V + G F LYDT+GFPV++T + A E
Sbjct: 356 EERFAETLEQGMKILEACVA------KLDGHV--IPGDVVFQLYDTYGFPVDLTADFARE 407
Query: 466 HGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTLSAKAIVE 525
+ +SVD GF+IEM QR +++A + D D+ DTEF GY TL+ +
Sbjct: 408 NNLSVDHHGFEIEMSAQRDRARAGGT---FAADYDQDIKHD-SDTEFTGYYTLNGSVEII 463
Query: 526 SLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVK 585
L G+PV + G + V+L++TPFYAESGGQ+GD G + AV EV D +
Sbjct: 464 GLYKKGQPVDSLEAGDEGVVILDQTPFYAESGGQVGDTGLIECG------GAVFEVHDTQ 517
Query: 586 KSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQ 645
K G +F+HKG + +GV+ G+ E VD + R+ + +H+ATHLL AAL+ +G+ +Q
Sbjct: 518 KQGGKLFLHKGKVLQGVIASGQACEVSVDAETRKATERNHSATHLLHAALRTTLGEHVAQ 577
Query: 646 AGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAM 705
GS V +RLRFDF+ P+ E+ IE ++N I N + +VMA DDA +AGA+A+
Sbjct: 578 KGSQVNAERLRFDFSHFEPMTAAEIAMIEDMVNEQIRLNNPVAAEVMAKDDAMKAGAMAL 637
Query: 706 FGEKYGEQVKI 716
FGEKYG++V++
Sbjct: 638 FGEKYGDEVRV 648
>gi|154253021|ref|YP_001413845.1| alanyl-tRNA synthetase [Parvibaculum lavamentivorans DS-1]
gi|154156971|gb|ABS64188.1| alanyl-tRNA synthetase [Parvibaculum lavamentivorans DS-1]
Length = 913
Score = 560 bits (1442), Expect = e-156, Method: Compositional matrix adjust.
Identities = 302/679 (44%), Positives = 433/679 (63%), Gaps = 40/679 (5%)
Query: 51 DSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATS 109
+ IR ++L+F+ ++GH+V+ S LVP DPT+L T AGM+ FK +F G+ R RAA+S
Sbjct: 26 NEIRSKYLEFFRAQGHEVVASGPLVPNNDPTLLFTNAGMVPFKNVFTGQETRPYKRAASS 85
Query: 110 QRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANR 165
Q+C+R ND++NVG T+RHHTFFEMLGNFSFGDY+K EAI++AW+ T E LP +R
Sbjct: 86 QKCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYYKAEAIEFAWDLITKELALPESR 145
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDR- 224
L +++YEDDDEA +W K G+ + I R+GA NFW G TGPCGP SEI+YD H D+
Sbjct: 146 LMVTIYEDDDEAHGLWKKITGLSDDKIVRLGAKSNFWQMGDTGPCGPNSEIFYD-HGDKI 204
Query: 225 -----GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQK 279
G D D GD RFIE +NLVFMQY + +DGS L + +IDTG+GLERIA +LQ
Sbjct: 205 PGGPPGSPDED-GD--RFIEIWNLVFMQYEQHEDGSRTRLPKPSIDTGMGLERIAAVLQG 261
Query: 280 VPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIG 339
+NY TDL+ +I ++E S + + ++ ++I DHLR+ +LL+DGV PSN G
Sbjct: 262 THDNYSTDLMRSLIVASAE---ASKSDPDGPHAVSHRVIADHLRSSSFLLADGVMPSNEG 318
Query: 340 RGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRIL 399
RGYV+RR++RRA+R +L+G+ L A + + + EL + E +
Sbjct: 319 RGYVLRRIMRRAMRHAQLVGVAEPLMWRLVPALVRQMGDAYPEL--------RRAEALVT 370
Query: 400 EELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEIT 459
E L+ EE RF +TL RG KLLD+ + G L+G+ AF LYDT+GFP+++T
Sbjct: 371 ETLRLEETRFRETLTRGLKLLDEEI-------ESLGGKGVLAGEVAFKLYDTYGFPLDLT 423
Query: 460 KEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSA--DLAEKIPDTEFLGYDT 517
++ G+SVD GFD M QR+ ++AA + ++ +L +K+ TEFLGY++
Sbjct: 424 QDALRSRGMSVDQTGFDEAMAKQRQDARAAWSGSGEKATEAVWFELRDKVGATEFLGYES 483
Query: 518 LSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTA 577
A+ V +LLV+G+PV KV G+D ++ N+TPFYAESGGQ+GD G ++ G A
Sbjct: 484 EIAEGKVVALLVDGQPVDKVEAGTDAALITNQTPFYAESGGQVGDTGIVFSADG-----A 538
Query: 578 VVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKK 637
V D K LG++ VH G + G L++G VE VD LR + +H+ATHLL AL++
Sbjct: 539 EFPVIDTMKKLGALHVHIGKLARGTLKLGDIVEMKVDKSLRDATRANHSATHLLHEALRR 598
Query: 638 VIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDA 697
V+G +Q GS+V +RLRFDF+ +P+ E+ E+E ++N I + T++M +DA
Sbjct: 599 VLGDHVTQKGSMVGPERLRFDFSHPKPMTPEEISEVETIVNRVIRQNAEVTTRLMTPEDA 658
Query: 698 KRAGAIAMFGEKYGEQVKI 716
AGA+A+FGEKYGE+V++
Sbjct: 659 IAAGALALFGEKYGEEVRV 677
>gi|145300678|ref|YP_001143519.1| alanyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
A449]
gi|418361148|ref|ZP_12961804.1| alanyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
01-B526]
gi|205829973|sp|A4SS99.1|SYA_AERS4 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|142853450|gb|ABO91771.1| alanyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
A449]
gi|356687506|gb|EHI52087.1| alanyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
01-B526]
Length = 874
Score = 560 bits (1442), Expect = e-156, Method: Compositional matrix adjust.
Identities = 308/683 (45%), Positives = 431/683 (63%), Gaps = 47/683 (6%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S IR FL+++ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA
Sbjct: 4 STSEIRAAFLEYFRSQGHQVVSSSSLVPHNDPTLLFTNAGMNQFKDVFLGADKRAYNRAT 63
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
TSQRC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI++AWEF T LP
Sbjct: 64 TSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAIRFAWEFLTGTLKLPK 123
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEI 216
RL ++VYE DDEAF IW EVGVPVE I R+G A DNFW TGPCGPC+EI
Sbjct: 124 ERLLVTVYETDDEAFNIWANEVGVPVERIVRIGDNKGAAFASDNFWQMSDTGPCGPCTEI 183
Query: 217 YYDFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERI 273
+YD H D G D RFIE +N+VFMQ+N++ DG++EPL + ++DTG+GLERI
Sbjct: 184 FYD-HGDHIWGGPPGSPEEDGDRFIEIWNVVFMQFNRQADGTMEPLPRPSVDTGMGLERI 242
Query: 274 ARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGV 333
+ I+Q V +NYE D+ +IKKA+E+ + D +N +L++I DH+R+ +L++DGV
Sbjct: 243 SAIMQGVHSNYEIDIFQALIKKAAEIVG-----TTDLSNQSLRVIADHIRSCAFLIADGV 297
Query: 334 FPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKA 393
PSN GRGYV+RR+IRRAVR GR LG + F AE A+++ + +++ A
Sbjct: 298 MPSNEGRGYVLRRIIRRAVRHGRKLGAT-------DVFFYKLAAELAVQMK-DVGAELIA 349
Query: 394 REQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFG 453
+ + L+ EE +FV+TL+RG LL+ +LA+ G + G+ F LYDT+G
Sbjct: 350 QLPLVKRVLRIEEEQFVRTLDRGLLLLEDVLANL-------GDAKVIPGEVVFKLYDTYG 402
Query: 454 FPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFL 513
FP ++T +V E + +D +GF+ EME QR +++ A ++ ++ ++ L + P F
Sbjct: 403 FPADLTADVVREREIGIDEEGFNAEMEKQRARAKEA-SSFGVNYNEVLKLDFETP---FT 458
Query: 514 GYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTN 573
GY LS K V + +G V + G + V+L TPFYAESGGQ+GD G L V G
Sbjct: 459 GYKQLSQKTSVVGIYKDGVEVNGLIAGEEAVVVLAETPFYAESGGQVGDCGVLKVDDG-- 516
Query: 574 QQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQA 633
+ V D +K+ G +HKG + G LE G VEA+VD + RQ ++H+ THLL A
Sbjct: 517 ----IFAVTDTQKA-GKAIIHKGYLELGTLEKGALVEAVVDGERRQAVALNHSVTHLLHA 571
Query: 634 ALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMA 693
AL++ +G +Q GSLV +R+RFDF+ L + +E L+N I + + T+VM
Sbjct: 572 ALRQALGDHVTQKGSLVGAERMRFDFSHFEGLTMATIRRVEELVNAQIRANHDIATQVMD 631
Query: 694 LDDAKRAGAIAMFGEKYGEQVKI 716
L+ AK AGA+A+FGEKY + V++
Sbjct: 632 LEAAKSAGAMALFGEKYEDDVRV 654
>gi|255319660|ref|ZP_05360869.1| alanyl-tRNA synthetase [Acinetobacter radioresistens SK82]
gi|262378543|ref|ZP_06071700.1| alanyl-tRNA synthetase [Acinetobacter radioresistens SH164]
gi|255303277|gb|EET82485.1| alanyl-tRNA synthetase [Acinetobacter radioresistens SK82]
gi|262299828|gb|EEY87740.1| alanyl-tRNA synthetase [Acinetobacter radioresistens SH164]
Length = 897
Score = 560 bits (1442), Expect = e-156, Method: Compositional matrix adjust.
Identities = 315/703 (44%), Positives = 443/703 (63%), Gaps = 57/703 (8%)
Query: 43 SQDFPSSGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPR 101
S F +S + IR+ FL ++ S+GH + S+SLVP DPT+L T AGM QFK FLG R
Sbjct: 2 STRFMTSAE-IREAFLRYFESQGHTRVASSSLVPANDPTLLFTNAGMNQFKDCFLGAEKR 60
Query: 102 QVPRAATSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTV 157
RA +SQ+C+R ND++NVG T+RHHTFFEMLGNFSFGDYFK++AI++AWEF T
Sbjct: 61 DYVRAVSSQKCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKRDAIKFAWEFLTS 120
Query: 158 E--FGLPANRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATG 208
E LP +RL+ +VY DDEAF+IWNKE+G+ E I R+G A DNFW G TG
Sbjct: 121 EQWLALPKDRLYATVYHTDDEAFDIWNKEIGLDAERIIRIGDNKGEKYASDNFWAMGDTG 180
Query: 209 PCGPCSEIYYDFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNID 265
PCGPCSEI+YD H D G D RFIE +N VFMQ+N+ DG L L ++D
Sbjct: 181 PCGPCSEIFYD-HGDHIWGGLPGTPEEDGDRFIEIWNNVFMQFNRTADGVLHALPAPSVD 239
Query: 266 TGLGLERIARILQKVPNNYETDLIFPIIKKASELANVSYA----QSNDRTN-----LNLK 316
TG+GLERI+ +LQ V +NYE DL ++K A+E+ V A ++ ++ +LK
Sbjct: 240 TGMGLERISAVLQHVNSNYEIDLFQHLLKAAAEIIGVDTASLEAEAKEKNTPVHYPASLK 299
Query: 317 IIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSI 376
++ DH R+ +L++DGV PSN GRGYV+RR+IRRAVR G LG G F +
Sbjct: 300 VVADHARSCCFLIADGVNPSNEGRGYVLRRIIRRAVRHGNKLGATG--------TFFYKM 351
Query: 377 AEKAIELSTHIDSDVKAREQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGS 436
+ IE+ +++A + RI L +EE +F +TLE+G KLL+ L T+ GS
Sbjct: 352 LQPLIEVMGTAYPELEANKARIEAALIKEEEQFAKTLEQGLKLLEGEL------TQLKGS 405
Query: 437 VPRLSGQDAFLLYDTFGFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLS 496
+ + G+ F LYDT+GFPV++T ++A E +S+D GF+ EM QR Q A A K +
Sbjct: 406 I--IPGEIVFKLYDTYGFPVDLTADIARERDLSIDEAGFEKEMAAQR---QRAREAGKFA 460
Query: 497 VDDSADLAEKIPD-TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAE 555
VD ++ + K+ D TEF GYD + + + ++ +G V +V++G + ++LN+TPFYAE
Sbjct: 461 VDYNSIV--KVEDETEFSGYDAIEGQGQIIAIYKDGTLVDEVTEGDEALIVLNQTPFYAE 518
Query: 556 SGGQIGDYGFLYVTQGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDP 615
SGGQIGD G +T + EV+D KKS G+ FVH+G + G L+V + VEA V
Sbjct: 519 SGGQIGDTGIF------KNETGIFEVQDTKKS-GNAFVHQGIVTMGNLKVTQNVEATVKA 571
Query: 616 KLRQRAKVHHTATHLLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIER 675
+LR +H+ATHLL AAL++++G Q GSLVA D LRFDF +P+ +L++IER
Sbjct: 572 ELRAATARNHSATHLLHAALRQILGSHVQQKGSLVASDILRFDFANDQPVTFEQLQQIER 631
Query: 676 LINGWIGDANLLQTKVMALDDAKRAGAIAMFGEKYGEQVKISS 718
L+N + + T+++ ++ AK GA+ +FGEKYG +V++ S
Sbjct: 632 LVNAEVIANTAVTTELLDIETAKTKGAMMLFGEKYGSEVRVLS 674
>gi|416076720|ref|ZP_11585646.1| alanyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype b str. SCC1398]
gi|444338379|ref|ZP_21152222.1| alanyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype b str. SCC4092]
gi|348004467|gb|EGY44970.1| alanyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype b str. SCC1398]
gi|443545148|gb|ELT54997.1| alanyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype b str. SCC4092]
Length = 847
Score = 560 bits (1442), Expect = e-156, Method: Compositional matrix adjust.
Identities = 306/660 (46%), Positives = 414/660 (62%), Gaps = 50/660 (7%)
Query: 74 LVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQRCIRT----NDVENVGRTSRHH 128
+VPE DPT+L T AGM QFK +FLG R RA T+QRC+R ND+ENVG T+RHH
Sbjct: 1 MVPENDPTLLFTNAGMNQFKNVFLGLEKRPYSRATTAQRCVRAGGKHNDLENVGYTARHH 60
Query: 129 TFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANRLWISVYEDDDEAFEIWNKEVG 186
TFFEMLGNFSFGDYFK++AI + WEF T GLP RLW++VYE D+EA++IW+ E+G
Sbjct: 61 TFFEMLGNFSFGDYFKQDAIHFGWEFLTSPQWLGLPKERLWVTVYETDEEAYKIWHDEIG 120
Query: 187 VPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYYDFHPDR---GCSDVDLGDDTR 236
+ E I R+G A DNFW G TGPCGPC+EI+YD H D G D R
Sbjct: 121 IVAERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFYD-HGDHIWGGPPGSPEEDGDR 179
Query: 237 FIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDLIFPIIKKA 296
+IE +N+VFMQ+N+ DG++E L + ++DTG+GLERI+ +LQ V +NY D+ +I K
Sbjct: 180 YIEIWNIVFMQFNRHADGTMEKLPKPSVDTGMGLERISAVLQHVNSNYNIDIFQKLIAKT 239
Query: 297 SELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLIRRAVRTGR 356
+EL D TN +L++I DH+R+ YL+ DGV PSN GRGYV+RR+IRRAVR G
Sbjct: 240 AELTG-----EKDLTNKSLRVIADHIRSCAYLIVDGVVPSNEGRGYVLRRIIRRAVRHGH 294
Query: 357 LLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELRFVQTLERG 416
LLG AF + IE+ +VK + + + L+ EE +F +TLERG
Sbjct: 295 LLGAAE--------AFFYKLVPTLIEVMAQAGEEVKKHQATVEKLLRLEEEQFARTLERG 346
Query: 417 EKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGVSVDMKGFD 476
LLD+ LA+ + LSG+ AF LYDT+GFP+++T +V E G+++D GF+
Sbjct: 347 LTLLDEALAEVKGKV--------LSGEVAFKLYDTYGFPLDLTADVCRERGITIDEAGFE 398
Query: 477 IEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTLSAKAIVESLLVNGKPVIK 536
EMENQR ++Q+A D ++ T F GY A V +L +GKPV
Sbjct: 399 REMENQRLRAQSASQFGM----DYNNVIRVDGITRFEGYTESETLAKVTALFHDGKPVDT 454
Query: 537 VSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVKKSLGSVFVHKG 596
+S G V+L+ TPFYAESGGQIGD G L G N +VKD +K G VF H G
Sbjct: 455 ISSGQSAVVILDNTPFYAESGGQIGDIGRLE-GNGFN-----FDVKDTQK-YGQVFGHIG 507
Query: 597 TIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQAGSLVAFDRLR 656
+ +G L VG+ V A+VD RQR ++H+ATHLL AAL++V+G+ +Q GSLV+ LR
Sbjct: 508 ELTQGSLSVGQSVNAVVDEVRRQRISLNHSATHLLHAALRQVLGEHVAQKGSLVSDALLR 567
Query: 657 FDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAMFGEKYGEQVKI 716
FDF H P+ +L E+ER++N + N ++T +M L+ AK GA+A+FGEKY +QV++
Sbjct: 568 FDFAQHEPISKAQLAEVERIVNQQVRANNPIKTDIMELEAAKAKGAMALFGEKYSDQVRV 627
>gi|261492574|ref|ZP_05989127.1| alanine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
BOVINE]
gi|261311733|gb|EEY12883.1| alanine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
BOVINE]
Length = 875
Score = 560 bits (1442), Expect = e-156, Method: Compositional matrix adjust.
Identities = 301/681 (44%), Positives = 428/681 (62%), Gaps = 49/681 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FL+F+ ++GH ++PS+SLVPE DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 7 IRQSFLEFFQTKGHTIVPSSSLVPENDPTLLFTNAGMNQFKDVFLGLEKRPYSRATTAQR 66
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEM+GNFSFGDYFK++AI++ WEF T GLP +
Sbjct: 67 CVRAGGKHNDLENVGYTARHHTFFEMMGNFSFGDYFKQDAIKFGWEFLTSPQWLGLPKEK 126
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
L+++VYE DDEA++IW+KEVGVP EHI R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 127 LYVTVYETDDEAYDIWHKEVGVPSEHIIRIGDNKGAPYASDNFWAMGDTGPCGPCTEIFY 186
Query: 219 DFHPDR--GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARI 276
D P+ G D R+IE +N+VFMQ+N+ DG++E L + ++DTG+GLER+ +
Sbjct: 187 DHGPEHWGGLPGSPEEDGDRYIEVWNIVFMQFNRLADGTMEKLPKPSVDTGMGLERMTAV 246
Query: 277 LQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPS 336
+Q V +NYETD+ +IK+ + L NV D N +L+++ DH+RA YL++DGV PS
Sbjct: 247 MQHVNSNYETDIFQTLIKEVATLLNV-----KDLDNKSLRVVADHIRACSYLIADGVLPS 301
Query: 337 NIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQ 396
N GRGYV+RR+IRRAVR G +LG K AF + + + ++
Sbjct: 302 NEGRGYVLRRIIRRAVRHGNILGTKE--------AFFYKLVPTLATVMGQAGEVLTQKQA 353
Query: 397 RILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPV 456
I + LK EE +F +TLERG LL++ LA + T LSG+ AF LYDT+GFP+
Sbjct: 354 HIQKTLKAEEEQFARTLERGLNLLEEALAKVENNT--------LSGEVAFKLYDTYGFPL 405
Query: 457 EITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYD 516
++T +V E + +D GF+ EM QR +++A+ + D ++ + T F GY
Sbjct: 406 DLTADVCRERDIKIDEDGFNAEMTAQRERAKASSSFGT----DYNNVIKVDSKTCFSGYT 461
Query: 517 TLSAK-AIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
S A V L NGK V + G + V+L++TPFYAE GGQ+GD G + + +
Sbjct: 462 ETSLNDATVIGLFSNGKSVESIQSGENAVVILDKTPFYAEMGGQVGDSGQI------SAE 515
Query: 576 TAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAAL 635
EV D +K G VF H G + G L VG +V IVD + R ++H+ATHLL +AL
Sbjct: 516 ICNFEVVDTQK-YGQVFGHIGQLTSGSLSVGDKVNTIVDRERRHAITLNHSATHLLHSAL 574
Query: 636 KKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALD 695
++V+G +Q GSLV+ + LRFD + + ++LEE+ER++N + + + + M ++
Sbjct: 575 RQVLGDHVAQKGSLVSENILRFDISQPEAITKSQLEEVERIVNAKVRENIQVIIEEMDIE 634
Query: 696 DAKRAGAIAMFGEKYGEQVKI 716
AK GA+A+FGEKYGE V++
Sbjct: 635 SAKAKGAMALFGEKYGEVVRV 655
>gi|407070456|ref|ZP_11101294.1| alanyl-tRNA ligase [Vibrio cyclitrophicus ZF14]
Length = 860
Score = 560 bits (1442), Expect = e-156, Method: Compositional matrix adjust.
Identities = 306/687 (44%), Positives = 431/687 (62%), Gaps = 51/687 (7%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S D +R FL F+ S+ H+++ S+SLVP DPT+L T AGM QFK FLG R RA
Sbjct: 4 STDEVRNAFLKFFESKEHQIVDSSSLVPHNDPTLLFTNAGMNQFKDCFLGAEKRAYTRAT 63
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
T+QRC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK+EAI +AWEF T LP
Sbjct: 64 TAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEEAIGFAWEFLTETLQLPK 123
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG--------ADDNFWNSGATGPCGPCSE 215
+RL ++VYE DDEAF+IWNK+VGVP + I R+G DNFW G TGPCGPC+E
Sbjct: 124 DRLLVTVYETDDEAFDIWNKKVGVPADRIVRIGDKEGGKQFESDNFWTMGDTGPCGPCTE 183
Query: 216 IYYDF--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERI 273
I+YD H G D RFIE +N VFMQ+N+ DG++EPL + +DTG+G+ERI
Sbjct: 184 IFYDHGEHIWGGRPGTPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPAVDTGMGIERI 243
Query: 274 ARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGV 333
+ I+Q V +NYE D+ +IK +E+ +D +N +L++I DH+R+ +L++DGV
Sbjct: 244 SAIMQGVHSNYEIDVFQKLIKATAEVVG-----HDDLSNQSLRVIADHIRSCSFLIADGV 298
Query: 334 FPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKA 393
PSN GRGYV+RR+IRRAVR G LG +G L G + A EL
Sbjct: 299 MPSNEGRGYVLRRIIRRAVRHGNKLGAQGVFFHKLVGVLAEVMGSAADELK--------- 349
Query: 394 REQRILEELKR-EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTF 452
++Q ++E++ R EE F +TLERG +L+ L DAL L G+ F LYDT+
Sbjct: 350 KQQELVEKVLRIEEENFGRTLERGMVILNDAL-DALEG-------KELDGETVFKLYDTY 401
Query: 453 GFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKI-PDTE 511
GFP ++T +VA E ++D +GF+ ME QR++ A A + D +A + K+ +TE
Sbjct: 402 GFPADLTNDVARERDFTIDEEGFEKAMEAQRKR---AREAGQFGTDYNATI--KVDTNTE 456
Query: 512 FLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQG 571
F GY + + +L V+G+ V +S G ++L TPFYAESGGQ GD G L G
Sbjct: 457 FCGYTSTEGAGEISALFVDGEEVSSLSAGDKAIIILEETPFYAESGGQCGDAGTLSTASG 516
Query: 572 TNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLL 631
+ +V+D +K LG+ F H G + EGV G +VEA VD + R ++H+ATHLL
Sbjct: 517 ------LFKVQDTQK-LGNAFAHHGELIEGVFAQGDKVEARVDAERRAAISLNHSATHLL 569
Query: 632 QAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKV 691
+AL++V+G+ +Q GSLV D LRFDF+ + +++E+ERL+N + ++++T +
Sbjct: 570 HSALREVLGEHVAQKGSLVKPDNLRFDFSNLEAVTPAQIKEVERLVNAQVRKNHVIETNI 629
Query: 692 MALDDAKRAGAIAMFGEKYGEQVKISS 718
M ++ AK+ GA+A+FGEKY ++V++ S
Sbjct: 630 MDIESAKQKGAMALFGEKYDDEVRVLS 656
>gi|254360816|ref|ZP_04976963.1| alanine--tRNA ligase [Mannheimia haemolytica PHL213]
gi|261495705|ref|ZP_05992149.1| alanine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
OVINE]
gi|452745287|ref|ZP_21945123.1| alanyl-tRNA ligase [Mannheimia haemolytica serotype 6 str. H23]
gi|153092290|gb|EDN73359.1| alanine--tRNA ligase [Mannheimia haemolytica PHL213]
gi|261308617|gb|EEY09876.1| alanine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
OVINE]
gi|452086680|gb|EME03067.1| alanyl-tRNA ligase [Mannheimia haemolytica serotype 6 str. H23]
Length = 875
Score = 559 bits (1441), Expect = e-156, Method: Compositional matrix adjust.
Identities = 301/681 (44%), Positives = 428/681 (62%), Gaps = 49/681 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FL+F+ ++GH ++PS+SLVPE DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 7 IRQSFLEFFQTKGHTIVPSSSLVPENDPTLLFTNAGMNQFKDVFLGLEKRPYSRATTAQR 66
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEM+GNFSFGDYFK++AI++ WEF T GLP +
Sbjct: 67 CVRAGGKHNDLENVGYTARHHTFFEMMGNFSFGDYFKQDAIKFGWEFLTSPQWLGLPKEK 126
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
L+++VYE DDEA++IW+KEVGVP EHI R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 127 LYVTVYETDDEAYDIWHKEVGVPSEHIIRIGDNKGAPYASDNFWAMGDTGPCGPCTEIFY 186
Query: 219 DFHPDR--GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARI 276
D P+ G D R+IE +N+VFMQ+N+ DG++E L + ++DTG+GLER+ +
Sbjct: 187 DHGPEHWGGLPGSPEEDGDRYIEVWNIVFMQFNRLADGTMEKLPKPSVDTGMGLERMTAV 246
Query: 277 LQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPS 336
+Q V +NYETD+ +IK+ + L NV D N +L+++ DH+RA YL++DGV PS
Sbjct: 247 MQHVNSNYETDIFQTLIKEVATLLNV-----KDLDNKSLRVVADHIRACSYLIADGVLPS 301
Query: 337 NIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQ 396
N GRGYV+RR+IRRAVR G +LG K AF + + + ++
Sbjct: 302 NEGRGYVLRRIIRRAVRHGNILGAKE--------AFFYKLVPTLATVMGQAGEVLTQKQA 353
Query: 397 RILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPV 456
I + LK EE +F +TLERG LL++ LA + T LSG+ AF LYDT+GFP+
Sbjct: 354 HIQKTLKAEEEQFARTLERGLNLLEEALAKVENNT--------LSGEVAFKLYDTYGFPL 405
Query: 457 EITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYD 516
++T +V E + +D GF+ EM QR +++A+ + D ++ + T F GY
Sbjct: 406 DLTADVCRERDIKIDEDGFNAEMTAQRERAKASSSFGT----DYNNVIKVDSKTCFSGYT 461
Query: 517 TLSAK-AIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
S A V L NGK V + G + V+L++TPFYAE GGQ+GD G + + +
Sbjct: 462 ETSLNDATVIGLFSNGKSVESIQSGENAVVILDKTPFYAEMGGQVGDSGQI------SAE 515
Query: 576 TAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAAL 635
EV D +K G VF H G + G L VG +V IVD + R ++H+ATHLL +AL
Sbjct: 516 ICNFEVVDTQK-YGQVFGHIGQLTSGSLSVGDKVNTIVDRERRHAITLNHSATHLLHSAL 574
Query: 636 KKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALD 695
++V+G +Q GSLV+ + LRFD + + ++LEE+ER++N + + + + M ++
Sbjct: 575 RQVLGDHVAQKGSLVSENILRFDISQPEAITKSQLEEVERIVNAKVRENIQVIIEEMDIE 634
Query: 696 DAKRAGAIAMFGEKYGEQVKI 716
AK GA+A+FGEKYGE V++
Sbjct: 635 SAKAKGAMALFGEKYGEVVRV 655
>gi|205830050|sp|Q1BX19.2|SYA_BURCA RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
Length = 874
Score = 559 bits (1441), Expect = e-156, Method: Compositional matrix adjust.
Identities = 302/679 (44%), Positives = 427/679 (62%), Gaps = 44/679 (6%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR++FL F+ S+GH ++ S+SLVP DPT++ T +GM+QFK +FLG PR RA T+QR
Sbjct: 6 IREKFLKFFESKGHTIVRSSSLVPGNDPTLMFTNSGMVQFKDVFLGTDPRPYSRATTAQR 65
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
+R ND+ENVG T+RHH FFEMLGNFSFGDYFK +AI++AWE T + LP ++LW
Sbjct: 66 SVRAGGKHNDLENVGYTARHHAFFEMLGNFSFGDYFKHDAIKFAWELLTTVYQLPKDKLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYYDF 220
++VY++DDEA++IW KEVGVP E I R+G A DNFW G TGPCGPC+EI+YD
Sbjct: 126 VTVYQEDDEAYDIWAKEVGVPTERIIRIGDNKGARYASDNFWTMGDTGPCGPCTEIFYDH 185
Query: 221 HPD--RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQ 278
PD G D R+IE +NLVFMQ+N+ G++ L ++++DTG+GLER+A +LQ
Sbjct: 186 GPDVWGGPPGSPEEDGDRYIEIWNLVFMQFNRDAQGNMTRLPKQSVDTGMGLERLAAVLQ 245
Query: 279 KVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNI 338
V +NYE DL +IK A+ + +S D TN +LK+I DH+RA +L+ DGV P N
Sbjct: 246 HVHSNYEIDLFQNLIKAAARVTEIS-----DLTNNSLKVIADHIRACSFLIVDGVIPGNE 300
Query: 339 GRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRI 398
GRGYV+RR++RRA+R G LG KG F +A+ E+ T ++K EQR+
Sbjct: 301 GRGYVLRRIVRRAIRHGYKLGRKG-------AFFHKLVADLVAEMGTAY-PELKEAEQRV 352
Query: 399 LEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEI 458
+ L++EE RF +T+E G +L+ LA+ ++ G V L G+ AF L+DT+GFP+++
Sbjct: 353 TDVLRQEEERFFETIEHGMSILEAALAEVEAK---GGKV--LDGELAFKLHDTYGFPLDL 407
Query: 459 TKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTL 518
T +V E G++VD FD M QR Q++AA + L T F GY+ +
Sbjct: 408 TADVCRERGMTVDEPAFDDAMARQREQARAAGK-----FKATQGLEYSGAKTTFHGYEEI 462
Query: 519 S-AKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTA 577
+ A V +L V+G V +V G D V+L+ TPFYAESGGQ+GD G L N T
Sbjct: 463 AFDDAKVVALYVDGSAVNEVKAGQDAVVVLDHTPFYAESGGQVGDQGVL-----ANAATR 517
Query: 578 VVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKK 637
V D K V H GT+ +G L+VG + A +D + R R + +H+ATHL+ AL++
Sbjct: 518 FA-VADTLKVQADVIGHHGTLEQGTLKVGDVLRAEIDAQRRARTQRNHSATHLMHKALRE 576
Query: 638 VIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDA 697
V+G Q GSLV D+ RFDF + P+ D E+ +E+++N I +VM D+A
Sbjct: 577 VLGAHVQQKGSLVDADKTRFDFAHNAPMTDDEIRRVEQIVNNEILANAPGIVRVMPYDEA 636
Query: 698 KRAGAIAMFGEKYGEQVKI 716
+ GA+A+FGEKYG++V++
Sbjct: 637 VKGGAMALFGEKYGDEVRV 655
>gi|336452027|ref|ZP_08622460.1| alanine--tRNA ligase [Idiomarina sp. A28L]
gi|336281074|gb|EGN74358.1| alanine--tRNA ligase [Idiomarina sp. A28L]
Length = 868
Score = 559 bits (1441), Expect = e-156, Method: Compositional matrix adjust.
Identities = 302/671 (45%), Positives = 426/671 (63%), Gaps = 38/671 (5%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR FL+F+A RGH+V+ S+SL+P D T+L T AGM+ FK +FLG R RA +SQR
Sbjct: 8 IRTAFLNFFAERGHQVVQSSSLIPGNDATLLFTNAGMVPFKDVFLGTDKRSYTRATSSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK+EAIQ+AW F T E LP +LW
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKREAIQYAWSFLTEELKLPKEKLW 127
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPD--RG 225
++V+E+DDEA++IW E+GVP E I R+GA DNFW G TGPCGPCSEI+YD + G
Sbjct: 128 VTVFEEDDEAYDIWADEMGVPHERISRIGAKDNFWQMGDTGPCGPCSEIFYDHGEEVWGG 187
Query: 226 CSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYE 285
D R+IE +NLVFMQ+N++ DGS+EPL Q ++DTG+GLERIA +LQ V +NYE
Sbjct: 188 PPGTPEEDGDRYIEIWNLVFMQFNRQADGSMEPLPQPSVDTGMGLERIAAVLQHVHSNYE 247
Query: 286 TDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVR 345
TD +IK A+E + + + +L++I DH+R+ +L++DGV PSN GRGYV+R
Sbjct: 248 TDTFVALIKAAAEAVG-----TEELSAQSLRVIADHIRSCSFLIADGVLPSNEGRGYVLR 302
Query: 346 RLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKRE 405
R+IRRAVR G LG GAF + + + L ++ ++RI + L +E
Sbjct: 303 RIIRRAVRHGSKLGAS--------GAFFHKLVAELVNLMGEAFPELTGAQERIEKALLQE 354
Query: 406 ELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEE 465
E +F +TL+RG LL++ +A E G+ L+G AF LYDT+GFP ++T ++ E
Sbjct: 355 EQQFARTLQRGMSLLEEEVA----TLPEGGT---LAGDVAFKLYDTYGFPYDLTADILRE 407
Query: 466 HGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTLSAKAIVE 525
G ++D GFD M QR ++Q A + D + L ++ +EF GY + A +
Sbjct: 408 RGFALDQAGFDKAMAEQRARAQ---QASQFGADYNERLKSEVV-SEFQGYSAYESNATIA 463
Query: 526 SLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVK 585
+ V G+ V +++ G + V+LN TPFYAESGGQ+GD G L V G T V + + +
Sbjct: 464 EIFVGGESVAQLATGEEGIVVLNSTPFYAESGGQVGDIGVLEVA-GEPVYT-VTDTQYIG 521
Query: 586 KSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQ 645
K++G H GT + L+VG V A+VD + R + +H+ATHL+ AAL+ V+G+ +Q
Sbjct: 522 KAIG----HHGTA-DIDLKVGDSVLAVVDDERRWAIRRNHSATHLIHAALRNVLGEHVAQ 576
Query: 646 AGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAM 705
GSLV RLRFDF + + EL+ IE +N I L T ++ +++AK GA+A+
Sbjct: 577 KGSLVNEQRLRFDFAHPQAVTAAELQAIEAQVNEQIRLNVALTTDILPIEEAKARGAMAL 636
Query: 706 FGEKYGEQVKI 716
FGEKY + V++
Sbjct: 637 FGEKYADDVRV 647
>gi|442608985|ref|ZP_21023726.1| Alanyl-tRNA synthetase [Pseudoalteromonas luteoviolacea B = ATCC
29581]
gi|441749597|emb|CCQ09788.1| Alanyl-tRNA synthetase [Pseudoalteromonas luteoviolacea B = ATCC
29581]
Length = 865
Score = 559 bits (1441), Expect = e-156, Method: Compositional matrix adjust.
Identities = 310/672 (46%), Positives = 428/672 (63%), Gaps = 42/672 (6%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+A H+V+PS+SL+P D T+L T AGM+QFK +FLG R RA +SQR
Sbjct: 9 IRQSFLDFFAKNQHQVVPSSSLIPGNDATLLFTNAGMVQFKDVFLGAEKRPYNRAVSSQR 68
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI++AW F T LPA +L
Sbjct: 69 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAIKFAWGFLTTVLQLPAEKLL 128
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDF--HPDRG 225
++VY +DDEAF+IWNKEVGVP E I R+ DNFW+ G TGPCGPCSEI+YD H G
Sbjct: 129 VTVYHEDDEAFDIWNKEVGVPAEKIIRISTSDNFWSMGDTGPCGPCSEIFYDHGEHIWGG 188
Query: 226 CSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYE 285
D RFIE +NLVFMQ+N+ DGS+EPL ++++DTG+GLERI+ I+Q V +NYE
Sbjct: 189 PPGSPEEDGDRFIEIWNLVFMQFNRHADGSMEPLPKQSVDTGMGLERISAIMQGVHSNYE 248
Query: 286 TDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVR 345
DL +I A+++ N + DR + +L+++ DH+R+ +L++DGV PSN GRGYV+R
Sbjct: 249 IDLFQALIAAAADVTN-----AKDREDKSLRVVADHIRSCAFLVADGVMPSNEGRGYVLR 303
Query: 346 RLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKR- 404
R++RRAVR G LG L A + + E EL A++Q I+E++ R
Sbjct: 304 RIVRRAVRHGNKLGATEPFFHKLVSALVEQMGEAYPEL---------AKQQAIIEKVLRI 354
Query: 405 EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAE 464
EE +F +TLERG +L++ LA +GSV + G+ F LYDT+GFP ++T +VA
Sbjct: 355 EEEQFGKTLERGLTILEESLATL------NGSV--IPGELVFKLYDTYGFPADLTADVAR 406
Query: 465 EHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTLSAKAIV 524
E +S+D +GF M+ QRR++Q A K D + +L + T+F GY+ V
Sbjct: 407 ERFLSIDERGFQEHMDAQRRKAQ---QAGKFGADYN-ELLKSDKTTDFKGYEAEHFTGTV 462
Query: 525 ESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDV 584
L G V + G + V+L+RTPFYAESGGQ+GD G L V+ G V D
Sbjct: 463 IELFHEGNTVSVLEDGQEGIVVLDRTPFYAESGGQVGDTGVLKVSSGE------FVVADT 516
Query: 585 KKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETS 644
K LG+ F HKG + G + V + +A +D + R R K +HTATHLL AL++ +G+ S
Sbjct: 517 TK-LGNAFAHKGKVI-GRIGVNDKADANIDAERRDRIKKNHTATHLLHEALRQELGEHVS 574
Query: 645 QAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIA 704
Q GSLV +RLRFDF+ + +L IE +N I L T++M +D+AK GA+A
Sbjct: 575 QKGSLVMAERLRFDFSHFEGVTKDQLRRIENAVNTEIRRNFALNTELMDIDEAKAKGAMA 634
Query: 705 MFGEKYGEQVKI 716
+FGEKY ++V++
Sbjct: 635 LFGEKYDDEVRV 646
>gi|350422194|ref|XP_003493086.1| PREDICTED: alanyl-tRNA synthetase-like [Bombus impatiens]
Length = 1572
Score = 559 bits (1441), Expect = e-156, Method: Compositional matrix adjust.
Identities = 306/692 (44%), Positives = 441/692 (63%), Gaps = 60/692 (8%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S IR+ FLDF+ ++ H+++ S+SLVP DPT+L T AGM QFK FLG+ R RA
Sbjct: 4 STAEIRQMFLDFFRAKNHEIVSSSSLVPHNDPTLLFTNAGMNQFKDTFLGQEKRNYTRAT 63
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGL 161
T+QRC+R ND++NVG T+RHHTFFEMLGNFSFGDYFK++AI++AWE T E F L
Sbjct: 64 TAQRCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKRDAIKYAWELLTAEGWFNL 123
Query: 162 PANRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCS 214
P RL ++VY DDEA+ IW E+G+P + I R+G A DNFW G TGPCGPC+
Sbjct: 124 PKERLLVTVYATDDEAYNIWFNEIGIPADRIIRIGDNKGAPYASDNFWQMGDTGPCGPCT 183
Query: 215 EIYYDFHPDR------GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGL 268
EI+YD H + G +D D GD RFIE +N+VFMQ+N++ DG+L PL + ++DTG+
Sbjct: 184 EIFYD-HGEHIWGGPPGSADED-GD--RFIEIWNIVFMQFNRQQDGTLLPLPKPSVDTGM 239
Query: 269 GLERIARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYL 328
GLERIA +LQ V +NY+ DL +I+ +++ + D N +L++I DH+R+ YL
Sbjct: 240 GLERIAAVLQHVNSNYDIDLFKKLIQSVADVIKIQ-----DLENKSLRVIADHIRSCAYL 294
Query: 329 LSDGVFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHID 388
++DGV PSN GRGYV+RR+IRRAVR G +LG K F + I++
Sbjct: 295 IADGVMPSNEGRGYVLRRIIRRAVRHGHMLGAKD--------VFFYKLVRPLIDVMESAA 346
Query: 389 SDVKAREQRILEE-LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFL 447
+D+ R+Q I+E LK EE +F++TLERG LLDQ L E + P L G+ AF
Sbjct: 347 TDL-VRQQNIVETTLKTEEEQFLRTLERGLALLDQAL--------EQLATPVLDGEVAFK 397
Query: 448 LYDTFGFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKI 507
LYDT+GFP ++T +V E ++VD GF+ ME QR++++ + N S+D + A K+
Sbjct: 398 LYDTYGFPFDLTADVCRERNITVDEAGFNKAMEMQRQRARESSN---FSID--YNKAIKL 452
Query: 508 PD-TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFL 566
D T+F+GY + +++ + ++ NG+ V ++ + ++LN+TPFY ESGGQ+GD G L
Sbjct: 453 EDVTDFIGYTDVESESQIVAIFKNGEAVECITAPDEAVIILNKTPFYGESGGQVGDKGEL 512
Query: 567 YVTQGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHT 626
T +V D +K G H G + +G ++VG ++A+++ +R++ K++H+
Sbjct: 513 VF------DTFKFKVNDTQK-YGQSIGHIGHLEKGCIKVGDSLKAVINTDIREKVKLNHS 565
Query: 627 ATHLLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANL 686
ATHLLQAAL+ V+G Q GSLV D LRFDF+ L +LEEIE L+N I +
Sbjct: 566 ATHLLQAALQNVLGSHVHQKGSLVTPDYLRFDFSHTEALSAEQLEEIENLVNQQIRRNLV 625
Query: 687 LQTKVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+ ++M L+ AK GA+A+FGEKY + V++ S
Sbjct: 626 VDVEIMELNKAKERGAMALFGEKYDDNVRVLS 657
>gi|312884640|ref|ZP_07744343.1| alanyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
gi|309367732|gb|EFP95281.1| alanyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
Length = 860
Score = 559 bits (1441), Expect = e-156, Method: Compositional matrix adjust.
Identities = 309/693 (44%), Positives = 431/693 (62%), Gaps = 63/693 (9%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S D +R FL F+ S+GH+++ S+SLVP DPT+L T AGM QFK FLG R RA
Sbjct: 4 STDEVRNAFLQFFESKGHQIVESSSLVPHNDPTLLFTNAGMNQFKDCFLGLEKRAYTRAT 63
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
+SQRC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI +AWEF T LP
Sbjct: 64 SSQRCLRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKQDAIAFAWEFLTEILKLPK 123
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG--------ADDNFWNSGATGPCGPCSE 215
+RL ++VYE DDEAF IWN+++GVP + I R+G DNFW G TGPCGPC+E
Sbjct: 124 DRLLVTVYETDDEAFNIWNQQIGVPADRIVRIGDKKGGKPYESDNFWQMGDTGPCGPCTE 183
Query: 216 IYYDF--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERI 273
I+YD H G D RFIE +N VFMQ+N+ DG++EPL + ++DTG+G+ERI
Sbjct: 184 IFYDHGEHIWGGRPGTPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPSVDTGMGIERI 243
Query: 274 ARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGV 333
+ I+Q V +NYE D+ +IK A+E+ +V D +N +L++I DH+R+ +L+ DGV
Sbjct: 244 SAIMQGVHSNYEIDVFQTLIKAAAEVISVE-----DLSNQSLRVIADHIRSCSFLIVDGV 298
Query: 334 FPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKA 393
PSN GRGYV+RR+IRRAVR G LG KG L G + EL
Sbjct: 299 MPSNEGRGYVLRRIIRRAVRHGNKLGAKGTFFFKLVGVLADVMGSAGEELK--------- 349
Query: 394 REQRILEELKR-EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTF 452
R+Q ++E++ R EE F +TLERG +L+ L + +T L G+ F LYDT+
Sbjct: 350 RQQALVEKVLRIEEENFGRTLERGMAILNDALDASADKT--------LDGETVFKLYDTY 401
Query: 453 GFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAA-------HNAVKLSVDDSADLAE 505
GFP ++T +VA E G +D GF+ ME QR++++ A + A+K+ DSA
Sbjct: 402 GFPADLTNDVARERGFIIDEAGFEQAMEVQRQRARDAGQFGTDYNEAIKV---DSA---- 454
Query: 506 KIPDTEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGF 565
TEF GY + SA V+++ V + V +S G ++L+ TPFYAESGGQ GD G
Sbjct: 455 ----TEFCGYTSTSALGTVDAMFVESRQVESLSAGDKAVLVLDETPFYAESGGQCGDSGQ 510
Query: 566 LYVTQGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHH 625
+ G + V+D +K LG+ H G ++EGVL +VEA+VD R ++H
Sbjct: 511 ICTDSG------IFVVEDTQK-LGNAIAHYGWMKEGVLASKDKVEALVDKGRRNAISLNH 563
Query: 626 TATHLLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDAN 685
+ATHLL AAL+KV+G+ +Q GSLV D LRFDF+ + E++++ERL+N + +
Sbjct: 564 SATHLLHAALRKVLGEHVTQKGSLVKADNLRFDFSHLEAMTADEIKQVERLVNDHVRLNH 623
Query: 686 LLQTKVMALDDAKRAGAIAMFGEKYGEQVKISS 718
++T +M ++ AK GA+A+FGEKY +QV++ S
Sbjct: 624 DVETDIMDIESAKSKGAMALFGEKYDDQVRVLS 656
>gi|107022482|ref|YP_620809.1| alanyl-tRNA synthetase [Burkholderia cenocepacia AU 1054]
gi|105892671|gb|ABF75836.1| alanyl-tRNA synthetase [Burkholderia cenocepacia AU 1054]
Length = 897
Score = 559 bits (1440), Expect = e-156, Method: Compositional matrix adjust.
Identities = 302/679 (44%), Positives = 427/679 (62%), Gaps = 44/679 (6%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR++FL F+ S+GH ++ S+SLVP DPT++ T +GM+QFK +FLG PR RA T+QR
Sbjct: 29 IREKFLKFFESKGHTIVRSSSLVPGNDPTLMFTNSGMVQFKDVFLGTDPRPYSRATTAQR 88
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
+R ND+ENVG T+RHH FFEMLGNFSFGDYFK +AI++AWE T + LP ++LW
Sbjct: 89 SVRAGGKHNDLENVGYTARHHAFFEMLGNFSFGDYFKHDAIKFAWELLTTVYQLPKDKLW 148
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYYDF 220
++VY++DDEA++IW KEVGVP E I R+G A DNFW G TGPCGPC+EI+YD
Sbjct: 149 VTVYQEDDEAYDIWAKEVGVPTERIIRIGDNKGARYASDNFWTMGDTGPCGPCTEIFYDH 208
Query: 221 HPD--RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQ 278
PD G D R+IE +NLVFMQ+N+ G++ L ++++DTG+GLER+A +LQ
Sbjct: 209 GPDVWGGPPGSPEEDGDRYIEIWNLVFMQFNRDAQGNMTRLPKQSVDTGMGLERLAAVLQ 268
Query: 279 KVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNI 338
V +NYE DL +IK A+ + +S D TN +LK+I DH+RA +L+ DGV P N
Sbjct: 269 HVHSNYEIDLFQNLIKAAARVTEIS-----DLTNNSLKVIADHIRACSFLIVDGVIPGNE 323
Query: 339 GRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRI 398
GRGYV+RR++RRA+R G LG KG F +A+ E+ T ++K EQR+
Sbjct: 324 GRGYVLRRIVRRAIRHGYKLGRKG-------AFFHKLVADLVAEMGTAY-PELKEAEQRV 375
Query: 399 LEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEI 458
+ L++EE RF +T+E G +L+ LA+ ++ G V L G+ AF L+DT+GFP+++
Sbjct: 376 TDVLRQEEERFFETIEHGMSILEAALAEVEAK---GGKV--LDGELAFKLHDTYGFPLDL 430
Query: 459 TKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTL 518
T +V E G++VD FD M QR Q++AA + L T F GY+ +
Sbjct: 431 TADVCRERGMTVDEPAFDDAMARQREQARAAGK-----FKATQGLEYSGAKTTFHGYEEI 485
Query: 519 S-AKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTA 577
+ A V +L V+G V +V G D V+L+ TPFYAESGGQ+GD G L N T
Sbjct: 486 AFDDAKVVALYVDGSAVNEVKAGQDAVVVLDHTPFYAESGGQVGDQGVL-----ANAATR 540
Query: 578 VVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKK 637
V D K V H GT+ +G L+VG + A +D + R R + +H+ATHL+ AL++
Sbjct: 541 FA-VADTLKVQADVIGHHGTLEQGTLKVGDVLRAEIDAQRRARTQRNHSATHLMHKALRE 599
Query: 638 VIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDA 697
V+G Q GSLV D+ RFDF + P+ D E+ +E+++N I +VM D+A
Sbjct: 600 VLGAHVQQKGSLVDADKTRFDFAHNAPMTDDEIRRVEQIVNNEILANAPGIVRVMPYDEA 659
Query: 698 KRAGAIAMFGEKYGEQVKI 716
+ GA+A+FGEKYG++V++
Sbjct: 660 VKGGAMALFGEKYGDEVRV 678
>gi|386314588|ref|YP_006010753.1| alanyl-tRNA synthetase [Shewanella putrefaciens 200]
gi|319427213|gb|ADV55287.1| alanyl-tRNA synthetase [Shewanella putrefaciens 200]
Length = 874
Score = 559 bits (1440), Expect = e-156, Method: Compositional matrix adjust.
Identities = 313/683 (45%), Positives = 429/683 (62%), Gaps = 56/683 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
+R FL+F+ S GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 8 LRSAFLEFFRSHGHQVVDSSSLVPGNDPTLLFTNAGMNQFKDVFLGMDKRNYTRATTAQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
C+R ND++NVG T+RHHTFFEMLGNFSFGDYFK+EAI++ W F T LP RL
Sbjct: 68 CVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKEEAIRFGWSFLTETLKLPKERLC 127
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYYDF 220
+++Y+ DDEAFEIWNK++GV E+I R+G A DNFW G TGPCGPC+EI+YD
Sbjct: 128 VTIYQTDDEAFEIWNKKIGVAAENIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFYD- 186
Query: 221 HPD-----RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
H D R S + GD RFIE +N+VFMQYN++ G + PL + ++DTG+G+ERIA
Sbjct: 187 HGDHIWGGRPGSPEEDGD--RFIEIWNIVFMQYNRQASGEMLPLPKPSVDTGMGIERIAA 244
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
I+Q V +NYE D+ +I KA+E+ V+ D +N +L++I DH+R+ +L++DGV P
Sbjct: 245 IMQGVHSNYEIDIFRALIAKAAEIIGVT-----DLSNKSLRVIADHIRSCAFLVADGVMP 299
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN GRGYV+RR+IRRAVR G LG AF + I++ + A
Sbjct: 300 SNEGRGYVLRRIIRRAVRHGNKLGAT--------EAFFYKLVPTLIDVMGDAAKGL-AET 350
Query: 396 QRILEE-LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGF 454
Q I+E+ LK EE +F +TLERG +LD L++ T L G+ F LYDT+GF
Sbjct: 351 QVIVEKALKAEEEQFARTLERGLGILDAALSELTGDT--------LDGETVFKLYDTYGF 402
Query: 455 PVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKI-PDTEFL 513
P+++T +V E + VD GF+ M QR ++QAA N D +A L KI +T F
Sbjct: 403 PMDLTADVCRERNIIVDEAGFEAAMAEQRSRAQAAGN---FGADYNAAL--KIDAETAFC 457
Query: 514 GYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTN 573
GY L +A V ++ NG+ V + G + ++L+ TPFYAESGGQ+GD G L V G
Sbjct: 458 GYTELVGQAKVTAIYQNGESVTAIKAGDEAVLVLDVTPFYAESGGQVGDKGQL-VANGIE 516
Query: 574 QQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQA 633
V D +K G H+G + G L +G+ VEA VD KLR R +++H+ THLL A
Sbjct: 517 -----FTVNDTQK-YGQATGHQGVLVAGSLSIGQMVEAKVDKKLRHRTQLNHSVTHLLHA 570
Query: 634 ALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMA 693
AL++V+G +Q GSLV +RLRFDF+ + EL+++E L+N I + L+ MA
Sbjct: 571 ALRQVLGTHVTQKGSLVDPERLRFDFSHFEAVKPAELKQVEELVNTQIRRNHELKVAEMA 630
Query: 694 LDDAKRAGAIAMFGEKYGEQVKI 716
+D+AK GA+A+FGEKY QV++
Sbjct: 631 IDEAKEKGAMALFGEKYDAQVRV 653
>gi|294628346|ref|ZP_06706906.1| alanyl-tRNA synthetase [Streptomyces sp. e14]
gi|292831679|gb|EFF90028.1| alanyl-tRNA synthetase [Streptomyces sp. e14]
Length = 890
Score = 559 bits (1440), Expect = e-156, Method: Compositional matrix adjust.
Identities = 300/678 (44%), Positives = 427/678 (62%), Gaps = 33/678 (4%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQRC 112
IR+R+L F+ RGH V+PSASL+ +DPT+LL AGM+ FKP FLG+V PRA + Q+C
Sbjct: 6 IRRRWLSFFEERGHTVVPSASLIADDPTLLLVPAGMVPFKPYFLGEVKPPFPRATSVQKC 65
Query: 113 IRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE-----FGLPANRLW 167
+RT D+E VG+T+RH TFF+M GNFSFGDYFK+ AI+ AWE T +GL RLW
Sbjct: 66 VRTPDIEEVGKTTRHGTFFQMCGNFSFGDYFKEGAIKLAWELLTSPQDKGGYGLDPERLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCS 227
I+VY+DDDEA +IW++ VGVP E I+R+G DNFW+ G GPCGPCSEI YD P+ G
Sbjct: 126 ITVYKDDDEAEQIWHEVVGVPKERIQRLGMKDNFWSMGVPGPCGPCSEINYDRGPEFGVE 185
Query: 228 DVDLGDDTRFIEFYNLVFMQYNKKDDGS------LEPLKQKNIDTGLGLERIARILQKVP 281
+D R++E +NLVFMQY + + L L KNIDTGLGLER+A ILQ V
Sbjct: 186 GGPAVNDERYVEIWNLVFMQYERGEGTGKDNFEILGDLPSKNIDTGLGLERLAMILQGVQ 245
Query: 282 NNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRG 341
N YE D +IKKA+EL V+Y ++ ++++L+++ DH+R L+ DGV P N GRG
Sbjct: 246 NMYEIDTSMAVIKKATELTGVAYGDAH-ASDVSLRVVTDHMRTATMLIGDGVTPGNEGRG 304
Query: 342 YVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEE 401
YV+RR++RRA+R RLLG G +L + + ++ EL T +RI +
Sbjct: 305 YVLRRIMRRAIRNMRLLGATGPVVRDLIDVVVNMMGQQYPELVTD--------RERIEKV 356
Query: 402 LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKE 461
EE F++TL+ G +LD A++ T++SG LSG AFLL+DT+GFP+++T E
Sbjct: 357 ALAEENAFLKTLKAGTNILDT----AVTETKQSGG-KVLSGDKAFLLHDTWGFPIDLTLE 411
Query: 462 VAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSA---DLAEKIPDTEFLGYDTL 518
+A E G+SVD +GF M+ QR +++A A K D ++A+ +T+F+GY
Sbjct: 412 MAAEQGLSVDEEGFRRLMKEQRERAKADAQAKKTGHADLGAYREIADTAGETDFIGYTDT 471
Query: 519 SAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAV 578
++ + LLV+G ++G +VEV+L+RTPFYAE GGQIGD G + V G AV
Sbjct: 472 EGESTIVGLLVDGVSSPAATEGDEVEVVLDRTPFYAEGGGQIGDTGRIKVDSG-----AV 526
Query: 579 VEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKV 638
+E++D +K + V+VHKG ++ G + VG + A +D + R+ H+ATHL AL+
Sbjct: 527 IEIRDCQKPVPGVYVHKGVVQVGEVTVGAKAHASIDGRRRKAIARAHSATHLTHQALRDA 586
Query: 639 IGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAK 698
+G +QAGS R RFDF + + ++E+ IN + + +VM +D+AK
Sbjct: 587 LGPTAAQAGSENQPGRFRFDFGSPSAVPTAVMTDVEQKINEVLARDLDVHAEVMGIDEAK 646
Query: 699 RAGAIAMFGEKYGEQVKI 716
+ GAIA FGEKYGE+V++
Sbjct: 647 KQGAIAEFGEKYGERVRV 664
>gi|407800324|ref|ZP_11147186.1| alanyl-tRNA synthetase [Oceaniovalibus guishaninsula JLT2003]
gi|407057553|gb|EKE43527.1| alanyl-tRNA synthetase [Oceaniovalibus guishaninsula JLT2003]
Length = 884
Score = 559 bits (1440), Expect = e-156, Method: Compositional matrix adjust.
Identities = 310/686 (45%), Positives = 429/686 (62%), Gaps = 43/686 (6%)
Query: 46 FPSSGDSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVP 104
PS D IR FLDF+ GH+ +PS+SLVP+ DPT++ T +GM+QFK +F G R
Sbjct: 1 MPSLND-IRSTFLDFFVKHGHRQVPSSSLVPKNDPTLMFTNSGMVQFKNLFTGVEHRDYK 59
Query: 105 RAATSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFG 160
RA TSQ+C+R ND++NVG T+RHHTFFEMLGNFSFGDYFK +AI +AW+ T EFG
Sbjct: 60 RATTSQKCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKGDAIPFAWDLITKEFG 119
Query: 161 LPANRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDF 220
+ +RL ++VY DDEA IW K G+P I R+ DDNFW G TGPCGPCSEI+YD
Sbjct: 120 IDPSRLLVTVYHTDDEAASIWKKHAGLPDSRILRIATDDNFWMMGPTGPCGPCSEIFYD- 178
Query: 221 HPDR------GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIA 274
H D G D D GD RFIE +NLVFMQY + +DGS L ++IDTG+GLERI
Sbjct: 179 HGDHIPGGPPGSPDED-GD--RFIEIWNLVFMQYERFEDGSQRDLPNQSIDTGMGLERIG 235
Query: 275 RILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVF 334
+LQ +NY+TDL+ +I+ + A+V++ + N++ ++I DHLR+ +L++DGV
Sbjct: 236 ALLQGKHDNYDTDLLRTLIEAS---AHVTHTDPDGPGNVHHRVIADHLRSTSFLIADGVM 292
Query: 335 PSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAR 394
PS+ GRGYV+RR++RRA+R LLG K L A + + + ELS
Sbjct: 293 PSSEGRGYVLRRIMRRAMRHAHLLGAKDPVMYRLVPALVREMGQAFPELSQ--------S 344
Query: 395 EQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGF 454
+ I E L EE RF QTLERG +LLD D L+ + +P G+ AF LYDT+GF
Sbjct: 345 QATIEETLLGEETRFRQTLERGLRLLD----DELAVLPDGAELP---GETAFKLYDTYGF 397
Query: 455 PVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSA--DLAEKIPDTEF 512
P+++T++ E G V+ + F M Q+RQ++AA D + D+ E+ TEF
Sbjct: 398 PLDLTQDALRERGRGVNTEAFTSAMAEQKRQARAAWTGSGEVADQAIWFDVFERHGPTEF 457
Query: 513 LGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGT 572
LGYDTL A+ + +L+ V V G V+V++N+TPFYAE+GGQ+GD G +
Sbjct: 458 LGYDTLEAEGQITTLVAGTAEVDDVPLGQSVQVVVNQTPFYAEAGGQVGDQGTIRTP--- 514
Query: 573 NQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQ 632
TA++ V D +K G VF+H I EG + G+ + VD R R + +H+ATHLL
Sbjct: 515 ---TALLRVTDTRKVAG-VFIHLADIVEGNVRTGQPAQLTVDADRRARIRANHSATHLLH 570
Query: 633 AALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVM 692
AL++ +G +Q GSL A DRLRFDF+ +PL TEL +ER IN +I + ++T++M
Sbjct: 571 EALRQTLGPHVAQRGSLNAPDRLRFDFSHPKPLAPTELATVEREINHFIRQNSAVETRIM 630
Query: 693 ALDDAKRAGAIAMFGEKYGEQVKISS 718
D+A+ GA A+FGEKYG++V++ S
Sbjct: 631 TPDEARALGAQALFGEKYGDEVRVVS 656
>gi|422316341|ref|ZP_16397740.1| alanyl-tRNA synthetase [Fusobacterium periodonticum D10]
gi|404591267|gb|EKA93437.1| alanyl-tRNA synthetase [Fusobacterium periodonticum D10]
Length = 879
Score = 559 bits (1440), Expect = e-156, Method: Compositional matrix adjust.
Identities = 294/674 (43%), Positives = 432/674 (64%), Gaps = 35/674 (5%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
+G+ IR++F++F+ + HK SASL+P+DPT+LLT+AGM+ FKP FLG+ PR T
Sbjct: 15 TGNEIREKFIEFFMQKQHKHFESASLIPDDPTLLLTVAGMVPFKPYFLGQKEAPYPRVTT 74
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
Q+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFK+EAI W+WEF T L ++LW+
Sbjct: 75 YQKCIRTNDLENVGRTARHHTFFEMLGNFSFGDYFKEEAIAWSWEFVTEVLKLDKDKLWV 134
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYD----FHPDR 224
+V+ DDEA IW ++ P E I RMG +N+W++G TG CGPCSEI+ D + D
Sbjct: 135 TVFTTDDEAERIWIEKCNFPKERIVRMGESENWWSAGPTGSCGPCSEIHVDLGVQYGGDE 194
Query: 225 GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNY 284
D G D RFIE +NLVF ++N+ +DGSLEPL +KNIDTG GLERIA ++Q NN+
Sbjct: 195 NSKIGDEGTDNRFIEIWNLVFTEWNRMEDGSLEPLPKKNIDTGAGLERIAAVVQGKTNNF 254
Query: 285 ETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVV 344
ETDL+FPI+++A+ + Y + N TN +LK+I DH RA+ +L++DGV PSN GRGY++
Sbjct: 255 ETDLLFPILEEAARITGSQYGK-NPETNFSLKVITDHARAVTFLVNDGVIPSNEGRGYIL 313
Query: 345 RRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKR 404
RR++RRAVR GRLLG K F+ + +K +E D+K + I + +K
Sbjct: 314 RRILRRAVRHGRLLGYK--------DLFMYKMVDKVVERFEVAYPDLKKNLENIRKIVKI 365
Query: 405 EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAE 464
EE +F TL++G +L++Q + + L+ + +L G+ +F LYDT+GFP E+T+E+AE
Sbjct: 366 EEEKFSNTLDQGIQLVNQEIDNLLANGKN-----KLDGEVSFKLYDTYGFPYELTEEIAE 420
Query: 465 EHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDS--ADLAEKIPDTEFLGYDTLSAKA 522
E GV+V + F+ +ME Q+ ++++A V DS D +K T+F GY+ K
Sbjct: 421 ERGVTVLREEFEAKMEEQKEKARSAREVVMEKGQDSFIEDFYDKHGVTKFTGYE----KT 476
Query: 523 IVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVK 582
E+ L++ + +K ++ ++TPFYAESGGQ+GD G +Y N V++V+
Sbjct: 477 EDEATLLSSRE----AKDGKYLLIFDKTPFYAESGGQVGDQGRIY---SDNFSAKVLDVQ 529
Query: 583 DVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQE 642
K +F+H I +G E + + V+ R +HTATHLL AL++V+G
Sbjct: 530 KQK----DIFIHTVEIEKGSAEENKTYKLEVNLLRRLDTAKNHTATHLLHKALREVVGTH 585
Query: 643 TSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGA 702
QAGSLV D+LRFDF+ + + +L +IE ++N I + + ++++AK GA
Sbjct: 586 VQQAGSLVDPDKLRFDFSHYEAVTAEQLAKIENIVNEKIREGIDVVVSHHSIEEAKNLGA 645
Query: 703 IAMFGEKYGEQVKI 716
+ +FG+KYGE V++
Sbjct: 646 MMLFGDKYGEVVRV 659
>gi|355575924|ref|ZP_09045297.1| alanyl-tRNA synthetase [Olsenella sp. oral taxon 809 str. F0356]
gi|354817140|gb|EHF01650.1| alanyl-tRNA synthetase [Olsenella sp. oral taxon 809 str. F0356]
Length = 883
Score = 559 bits (1440), Expect = e-156, Method: Compositional matrix adjust.
Identities = 305/672 (45%), Positives = 428/672 (63%), Gaps = 32/672 (4%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQRC 112
IR FL F+ +G K+ PS+SLVPEDP++LL AGM QFK + G + A + Q+C
Sbjct: 14 IRSDFLRFFEEKGCKLYPSSSLVPEDPSLLLANAGMNQFKEYYQGTKTMREIGATSCQKC 73
Query: 113 IRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTV--EFGLPANRLWISV 170
+RTND++N+G SRH +FFEMLGNFSFG Y K +AI WAWEF T GLPA+RL+++V
Sbjct: 74 LRTNDIDNIG-DSRHLSFFEMLGNFSFGGYTKADAIAWAWEFITSPEHLGLPADRLYMTV 132
Query: 171 YEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPD-RGCSDV 229
+EDDDEA E+W+ + GV +HI R+G +DNFW +G TGPCGPCSEIY+D PD G +
Sbjct: 133 FEDDDEAIELWHAQ-GVAYDHISRLGEEDNFWAAGPTGPCGPCSEIYFDQGPDFEGEAPG 191
Query: 230 DLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDLI 289
D GD R++EF+NLVF QY++++DGS+ L +NIDTG+GLERIA I+Q +NYE D++
Sbjct: 192 DDGD--RYLEFWNLVFTQYDRQEDGSMPELPHRNIDTGMGLERIAAIMQHEGSNYEGDVL 249
Query: 290 FPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLIR 349
+I LA V+Y +S + +L+I+ DH RA+ +++ DG+ PSN GRGYV+RRL+R
Sbjct: 250 RTLIGVGERLAGVTYHESGS-VDKSLRIVADHSRAVSFMIGDGILPSNEGRGYVLRRLLR 308
Query: 350 RAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELRF 409
RAV GRLLGI +G FL S + L + + I + EE RF
Sbjct: 309 RAVYHGRLLGI--------QGRFLSSYVHEVTSLMADVYPQLVENGALIDGIVNAEEERF 360
Query: 410 VQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGVS 469
TL+ GE +L L G LSG AF L+DT+GFP+++T+E+ G
Sbjct: 361 GATLDAGETMLKAEL-------ESLGEGEDLSGAVAFKLHDTYGFPIDLTREICANSGHG 413
Query: 470 VDMKGFDIEMENQRRQSQAAHN--AVKLSVDDSADLAEKIPDTEFLGYDTLSAK-AIVES 526
+DM FD ME QR +++A N A + + L+++I TEF+GYD+ + A V +
Sbjct: 414 IDMGAFDSAMEAQRERARATANRDAWGKANNVWVSLSDRIAQTEFVGYDSDELEGARVLA 473
Query: 527 LLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVKK 586
L+ +G+ V + G VEV+L+RTPFYAE GGQ+GD G L + +G + Q V D +
Sbjct: 474 LVRDGEEVPSATLGQRVEVVLDRTPFYAEMGGQVGDTGRL-LAEGLSLQ-----VTDTRH 527
Query: 587 SLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQA 646
G + H + G + GRE+ A+VD R+ + +HTATHLL AALK+V+G+ SQA
Sbjct: 528 HEGGLVGHVAEVVAGEVAQGRELRAVVDHGRRELIRRNHTATHLLDAALKQVLGEHVSQA 587
Query: 647 GSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAMF 706
GSLVA DRLRFDF + E+E +E L+N I A + T++M +++AK +GA+A+F
Sbjct: 588 GSLVAPDRLRFDFTHFEAMTKDEVERVEGLVNAQIFAAEPIVTRIMGIEEAKASGAVALF 647
Query: 707 GEKYGEQVKISS 718
GEKYG+ V++ S
Sbjct: 648 GEKYGDVVRVVS 659
>gi|429197035|ref|ZP_19188957.1| alanine--tRNA ligase [Streptomyces ipomoeae 91-03]
gi|428667268|gb|EKX66369.1| alanine--tRNA ligase [Streptomyces ipomoeae 91-03]
Length = 890
Score = 559 bits (1440), Expect = e-156, Method: Compositional matrix adjust.
Identities = 298/678 (43%), Positives = 426/678 (62%), Gaps = 33/678 (4%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQRC 112
IR+R+L F+ RGH V+PSASL+ +DPT+LL AGM+ FKP FLG+V RA + Q+C
Sbjct: 6 IRRRWLSFFEERGHTVVPSASLIADDPTLLLVNAGMVPFKPYFLGEVKPSFTRATSVQKC 65
Query: 113 IRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE-----FGLPANRLW 167
+RT D+E VG+T+RH TFF+M GNFSFGDYFK+ AI+ AWE T +GL RLW
Sbjct: 66 VRTPDIEEVGKTTRHGTFFQMCGNFSFGDYFKEGAIKHAWELLTSPQDKGGYGLEPERLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCS 227
I+VY+DDDEA IW++++GVP E I+R+G DN+W+ G GPCGPCSEI YD P+ G
Sbjct: 126 ITVYKDDDEAERIWHEQIGVPKERIQRLGMKDNYWSMGVPGPCGPCSEINYDRGPEFGVE 185
Query: 228 DVDLGDDTRFIEFYNLVFMQYNKKDDGSLE------PLKQKNIDTGLGLERIARILQKVP 281
+D R++E +NLVFMQY + + S E L KNIDTGLGLER+A ILQ V
Sbjct: 186 GGPAVNDERYVEIWNLVFMQYERGEGTSKEDFEILGELPSKNIDTGLGLERLAMILQGVQ 245
Query: 282 NNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRG 341
N YE D +I KA+EL V Y + D ++++L+++ DH+R V L+ DGV P N GRG
Sbjct: 246 NMYEIDTSMAVINKATELTGVRYGDAKD-SDVSLRVVTDHIRTAVMLIGDGVTPGNEGRG 304
Query: 342 YVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEE 401
YV+RR++RRA+R RLLG G +L + + + EL T +RI +
Sbjct: 305 YVLRRIMRRAIRNMRLLGATGPVVQDLIDVVIGMMGRQYPELITD--------RERIEKV 356
Query: 402 LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKE 461
EE F++TL+ G +LD A++ T+ SG L+G AFLL+DT+GFP+++T E
Sbjct: 357 ALAEEAAFLKTLKAGTNILDT----AVTETKASGG-KVLAGDKAFLLHDTWGFPIDLTLE 411
Query: 462 VAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSA---DLAEKIPDTEFLGYDTL 518
+A E G+SVD +GF M+ QR +++A A K D ++A+ +T+F+GYD+
Sbjct: 412 MAAEQGLSVDEEGFRRLMKEQRERAKADARAKKTGHADLGAYREIADSSGETDFIGYDST 471
Query: 519 SAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAV 578
++ V +LV+G ++G +VE++L+RTPFYAE GGQIGD G + V G AV
Sbjct: 472 EGESTVVGILVDGLSSPAATEGDEVEIVLDRTPFYAEGGGQIGDTGRIKVDSG-----AV 526
Query: 579 VEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKV 638
+EV+D +K + V+VHKG ++ G + VG + A +D + R+ H+ATHL AL+
Sbjct: 527 IEVRDCQKPVPGVYVHKGVVQVGEVTVGAKAHASIDSRRRKAIARAHSATHLTHQALRDA 586
Query: 639 IGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAK 698
+G +QAGS R RFDF + + ++E+ IN + ++ +M +D+AK
Sbjct: 587 LGPTAAQAGSENQPGRFRFDFGSPSAVPTAVMTDVEQKINEVLARDLDVRADIMGIDEAK 646
Query: 699 RAGAIAMFGEKYGEQVKI 716
+ GAIA FGEKYGE+V++
Sbjct: 647 KQGAIAEFGEKYGERVRV 664
>gi|294793973|ref|ZP_06759110.1| alanine--tRNA ligase [Veillonella sp. 3_1_44]
gi|294455543|gb|EFG23915.1| alanine--tRNA ligase [Veillonella sp. 3_1_44]
Length = 871
Score = 559 bits (1440), Expect = e-156, Method: Compositional matrix adjust.
Identities = 307/676 (45%), Positives = 427/676 (63%), Gaps = 40/676 (5%)
Query: 50 GDSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
G+ +R+ +L F+ S+GH L S SL+PE DP++LL AGM KP F GK+ R T
Sbjct: 3 GNELRQAYLQFFESKGHLKLDSFSLIPENDPSLLLIGAGMAPLKPFFTGKLVPPCRRITT 62
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
Q+ +RT D+ENVGRT+RHHTFFEMLGNFSFGDYFKKEAI WAWEF T L NRL++
Sbjct: 63 CQKSMRTGDLENVGRTARHHTFFEMLGNFSFGDYFKKEAIHWAWEFLTEVIKLDKNRLYV 122
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
+VY DD EA++ W+ + GV HI R+ +DNFW G GPCGP SEI++D P+ GC D
Sbjct: 123 TVYPDDQEAYDTWHNDCGVEESHITRL--EDNFWEIG-EGPCGPDSEIFFDQGPEHGCDD 179
Query: 229 VDLG---DDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYE 285
+ D R++E +NLVF Q+NK DGS EPL+ KNIDTG GLER+A +LQ N+E
Sbjct: 180 PNCAPGCDCDRYLEIWNLVFTQFNKMPDGSYEPLQHKNIDTGAGLERLASVLQGCKTNFE 239
Query: 286 TDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVR 345
TDLIFPII+ ++ A V+Y + + T+++LK+I DH RA+ L+SDGV PSN GRGYV+R
Sbjct: 240 TDLIFPIIEATAKRAGVTYNE-DPNTDVSLKVIADHARAVTALISDGVLPSNEGRGYVLR 298
Query: 346 RLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKRE 405
R++RRAVR GRLLGI EG FL + + +++ + + ++ + ++ E
Sbjct: 299 RILRRAVRHGRLLGI--------EGIFLTPLIDVVVDILGPGITSIAEKQDFVKRVVQNE 350
Query: 406 ELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEE 465
E RF QTLE+G +LL+ ++ D L+ + + VP G + F LYDT+GFP E+T+E+A E
Sbjct: 351 EERFNQTLEQGLELLNSLI-DTLAAEKAT-VVP---GSEVFKLYDTYGFPWELTEEIASE 405
Query: 466 HGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTL--SAKAI 523
G ++D +GF+ M+ QR +++ A V + A +A PD FL + L
Sbjct: 406 RGFTIDHEGFEAAMKEQRERAREAR------VKEDAKVA--TPDITFLKDEELVEDEAET 457
Query: 524 VESLLVNGKPVIKV---SKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVE 580
S+L+ GK ++ + G ++ V++ TPF+AE GGQ+GD GF+ G VE
Sbjct: 458 ASSVLMLGKGSERLQTAADGDEITVIVRTTPFHAEGGGQLGDTGFIVGPMGK------VE 511
Query: 581 VKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIG 640
V + K+ H GT+ EG + G +V VD R +HTATHLL AALKKV+G
Sbjct: 512 VHNTKRLPEGTVYHIGTVIEGSISEGDDVTLEVDTNRRAAMARNHTATHLLHAALKKVLG 571
Query: 641 QETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRA 700
+ +QAGSLV D LRFDF P+ EL++IE L+N I A L M++D+AK
Sbjct: 572 EHVNQAGSLVTPDYLRFDFTHFSPVTQEELDQIEALVNEEILKATDLAIAEMSMDEAKAK 631
Query: 701 GAIAMFGEKYGEQVKI 716
GA+A+FG+KYG+ V++
Sbjct: 632 GAMALFGDKYGDVVRV 647
>gi|386742556|ref|YP_006215735.1| alanyl-tRNA synthetase [Providencia stuartii MRSN 2154]
gi|384479249|gb|AFH93044.1| alanyl-tRNA synthetase [Providencia stuartii MRSN 2154]
Length = 876
Score = 559 bits (1440), Expect = e-156, Method: Compositional matrix adjust.
Identities = 304/683 (44%), Positives = 429/683 (62%), Gaps = 50/683 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ ++GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 8 IRQAFLDFFHTKGHQVVSSSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRAYSRATTAQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AI +AWE T + F LP +
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAINFAWELLTGKEWFNLPKEK 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA++IW+KEVG+PV+ I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYETDDEAYDIWHKEVGIPVDRIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DF--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARI 276
D H G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA +
Sbjct: 188 DHGEHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQSDGTMEPLPKPSVDTGMGLERIAAV 247
Query: 277 LQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPS 336
LQ V +NY+ D+ +I A++ SND +N +L++I DH+R+ +L+SDGV PS
Sbjct: 248 LQHVNSNYDIDIFQELIAAAAKATG-----SNDLSNKSLRVIADHIRSCAFLVSDGVIPS 302
Query: 337 NIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQ 396
N GRGYV+RR+IRRAVR G +LG K L + + A EL AR+Q
Sbjct: 303 NEGRGYVLRRIIRRAVRHGYMLGAKDTFFYKLVAPLINVMGSAADEL---------ARQQ 353
Query: 397 RILEE-LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
+E+ LK EE +F +TLERG +LLD+ LA T L G+ F LYDT+GFP
Sbjct: 354 STVEKVLKTEEEQFARTLERGLQLLDEELAALKGDT--------LDGETVFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGY 515
+++T +V E + VD +GF+ ME+QRR+++ + D L + +EF GY
Sbjct: 406 MDLTADVCRERNIKVDEEGFERAMEDQRRRARESSGFGT----DYNSLIKVEKHSEFSGY 461
Query: 516 DTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
A + ++ NG+PV ++ G + V+L++T FYAESGGQ+GD G L G+
Sbjct: 462 AYNEQLATITAIYKNGQPVDSLNAGEEGLVILDKTAFYAESGGQVGDTGLLRNDSGS--- 518
Query: 576 TAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAAL 635
V D +K G H G + G L + ++A +D + R +++H+ATHLL AAL
Sbjct: 519 ---FIVTDTQK-YGQAIGHIGKVESGSLVINHRIDAKIDVERRDAIRLNHSATHLLHAAL 574
Query: 636 KKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALD 695
++V+G+ SQ GSLV LRFDF+ + +L E+E ++N I ++T++M L+
Sbjct: 575 RQVLGEHVSQKGSLVNDKYLRFDFSHFEAMTAAQLREVEDIVNAQIRKNTPIETELMDLE 634
Query: 696 DAKRAGAIAMFGEKYGEQVKISS 718
AK GA+A+FGEKY E+V++ S
Sbjct: 635 SAKAKGAMALFGEKYEERVRVLS 657
>gi|304316715|ref|YP_003851860.1| alanyl-tRNA synthetase [Thermoanaerobacterium thermosaccharolyticum
DSM 571]
gi|302778217|gb|ADL68776.1| alanyl-tRNA synthetase [Thermoanaerobacterium thermosaccharolyticum
DSM 571]
Length = 879
Score = 558 bits (1439), Expect = e-156, Method: Compositional matrix adjust.
Identities = 303/675 (44%), Positives = 434/675 (64%), Gaps = 35/675 (5%)
Query: 51 DSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATS 109
+ IR+++L F+ S+GH LPS SLVP+ D ++LL AGM KP F GK R T
Sbjct: 7 NEIREKYLSFFESKGHLRLPSFSLVPKNDKSLLLINAGMAPLKPYFTGKEIPPRKRVTTC 66
Query: 110 QRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWIS 169
Q+CIRT D+E VG+T+RH TFFEMLGNFSFGDYFKKEAI WAWEF T LP +RLW++
Sbjct: 67 QKCIRTPDIERVGKTARHGTFFEMLGNFSFGDYFKKEAIPWAWEFVTKVLELPEDRLWVT 126
Query: 170 VYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSDV 229
+YE+DDEA++IWNK VG+P E I RMG +DNFW G TGPCGPCSEIY+D ++GC
Sbjct: 127 IYENDDEAYDIWNKVVGLPPERIVRMGKEDNFWEIG-TGPCGPCSEIYFDRGEEKGCGKP 185
Query: 230 DLG---DDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYET 286
G D RFIEF+NLVF Q++K +G+ L + NIDTG+GLER+A I+Q V + ++
Sbjct: 186 TCGVGCDCDRFIEFWNLVFTQFDKDSEGNYNSLPKPNIDTGMGLERMATIMQGVDSIFDV 245
Query: 287 DLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRR 346
D+I I E+A V Y + + +++L++I DH+R + +++SDG+ PSN GRGYV+RR
Sbjct: 246 DVIRGITDYVGEMAGVKYG-DDKKNDVSLRVITDHIRGVTFMISDGILPSNEGRGYVLRR 304
Query: 347 LIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREE 406
++RRA R G+LLG L+ FL ++ + +E + ++ R+ I + +K+EE
Sbjct: 305 ILRRAARYGKLLG--------LDKPFLHNVVDVVVEHYSGAYPELIERKDYIKKVIKKEE 356
Query: 407 LRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEH 466
RF +T+++G +LD+ + D S + L G AF LYDT+GFP+E+TKE+ E
Sbjct: 357 ERFKETIDQGLGILDEYINDLRSEGKTV-----LEGNKAFKLYDTYGFPIELTKEILNES 411
Query: 467 GVSVDMKGFDIEMENQR---RQSQAAHNAVKLSVDDSADLAEKIPD--TEFLGYDTLSAK 521
G++VD + E+E QR R S+ NA+ D+ + D T+F+GYD++ +
Sbjct: 412 GMTVDEVEYQKELEKQRLRARSSRKEDNALW-----EKDIYSTLKDIETKFVGYDSVKSD 466
Query: 522 AIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEV 581
A V +++ + + V G +V V+L+ TPFYAESGGQ+GD G + + V +
Sbjct: 467 AKVLAIIKDNELVDSAEAGEEVNVILDMTPFYAESGGQVGDKGVI------KNEDVFVNI 520
Query: 582 KDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQ 641
KD KK+ G+ FVH GT+ G+L VG VEA++D K R +HTATHLL +AL+K IG
Sbjct: 521 KDCKKAGGNKFVHIGTVERGILSVGDTVEALIDEKNRLSTARNHTATHLLHSALRKFIGD 580
Query: 642 ETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAG 701
QAGSLV +RLRFDF ++ L D E++ IE +N I + + +M+ D+A + G
Sbjct: 581 HVHQAGSLVTPERLRFDFTHYQALTDEEIKTIENEVNEKIYENIDVSVDIMSHDEALKKG 640
Query: 702 AIAMFGEKYGEQVKI 716
A+A+F EKYG+ V++
Sbjct: 641 AMALFQEKYGDVVRV 655
>gi|183596274|ref|ZP_02958302.1| hypothetical protein PROSTU_00005 [Providencia stuartii ATCC 25827]
gi|188023874|gb|EDU61914.1| alanine--tRNA ligase [Providencia stuartii ATCC 25827]
Length = 876
Score = 558 bits (1439), Expect = e-156, Method: Compositional matrix adjust.
Identities = 304/683 (44%), Positives = 429/683 (62%), Gaps = 50/683 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ ++GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 8 IRQAFLDFFHTKGHQVVSSSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRAYSRATTAQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AI +AWE T + F LP +
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAINFAWELLTGKEWFNLPKEK 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA++IW+KEVG+PV+ I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYETDDEAYDIWHKEVGIPVDRIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DF--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARI 276
D H G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA +
Sbjct: 188 DHGEHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQSDGTMEPLPKPSVDTGMGLERIAAV 247
Query: 277 LQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPS 336
LQ V +NY+ D+ +I A++ SND +N +L++I DH+R+ +L+SDGV PS
Sbjct: 248 LQHVNSNYDIDIFQELIAAAAKATG-----SNDLSNKSLRVIADHIRSCAFLVSDGVIPS 302
Query: 337 NIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQ 396
N GRGYV+RR+IRRAVR G +LG K L + + A EL AR+Q
Sbjct: 303 NEGRGYVLRRIIRRAVRHGYMLGAKDTFFYKLVAPLINVMGAAADEL---------ARQQ 353
Query: 397 RILEE-LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
+E+ LK EE +F +TLERG +LLD+ LA T L G+ F LYDT+GFP
Sbjct: 354 STVEKVLKTEEEQFARTLERGLQLLDEELAALKGDT--------LDGETVFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGY 515
+++T +V E + VD +GF+ ME+QRR+++ + D L + +EF GY
Sbjct: 406 MDLTADVCRERNIKVDEEGFERAMEDQRRRARESSGFGT----DYNSLIKVEKHSEFSGY 461
Query: 516 DTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
A + ++ NG+PV ++ G + V+L++T FYAESGGQ+GD G L G+
Sbjct: 462 AYNEQLATITAIYKNGQPVDSLNAGEEGLVILDKTAFYAESGGQVGDTGLLRNDSGS--- 518
Query: 576 TAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAAL 635
V D +K G H G + G L + ++A +D + R +++H+ATHLL AAL
Sbjct: 519 ---FIVTDTQK-YGQAIGHIGKVESGSLVINHRIDAKIDVERRDAIRLNHSATHLLHAAL 574
Query: 636 KKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALD 695
++V+G+ SQ GSLV LRFDF+ + +L E+E ++N I ++T++M L+
Sbjct: 575 RQVLGEHVSQKGSLVNDKYLRFDFSHFEAMTAAQLREVEDIVNAQIRKNTPIETELMDLE 634
Query: 696 DAKRAGAIAMFGEKYGEQVKISS 718
AK GA+A+FGEKY E+V++ S
Sbjct: 635 SAKAKGAMALFGEKYEERVRVLS 657
>gi|1565288|emb|CAA69650.1| alanyl-tRNA synthatase [Thermus thermophilus HB8]
Length = 882
Score = 558 bits (1439), Expect = e-156, Method: Compositional matrix adjust.
Identities = 316/679 (46%), Positives = 428/679 (63%), Gaps = 46/679 (6%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPED-PTVLLTIAGMLQFKPIFLGKVP----RQVPRAA 107
IR++FL F+ +GH LPS SL+PED P++L T AGM KP FLG P R+ R
Sbjct: 6 IREKFLSFFEGKGHLRLPSFSLIPEDDPSLLFTSAGMAPLKPYFLGAKPIFGGREWRRVT 65
Query: 108 TSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
T Q C+R D+ENVGRTSRH+T+FEMLGNFSFGDYFKKEAI WAWEF T L RLW
Sbjct: 66 TCQECLRVGDIENVGRTSRHNTYFEMLGNFSFGDYFKKEAILWAWEFLTEHLKLDPGRLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGA-----TGPCGPCSEIYYDFHP 222
++V+EDDDEA+EIW VGVP E I R G D+N+W GA GP GPCSE +YD P
Sbjct: 126 VTVFEDDDEAYEIWRDLVGVPEERIGRFGEDENYWPGGAITHGPNGPSGPCSETFYDRGP 185
Query: 223 DRGCSD---VDLGDDTRFIEFYNLVFMQYNKK----DDGSLEPLKQKNIDTGLGLERIAR 275
G D + G RF+E +NLVF QY+++ G L+PL QKNIDTG+GL R+A
Sbjct: 186 AYGTPDETGPNTGSGDRFVEIWNLVFTQYDRQAPIPGPGILKPLPQKNIDTGMGLYRVAA 245
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
ILQ V + Y TD FPII++ + ++ Y +T+++ ++I DH+RA+V LSDG
Sbjct: 246 ILQDVEDFYRTDTFFPIIQEVARMSGRPY---EGKTSVSHRVIADHVRAVVAALSDGATF 302
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN GRGYV+RRL+RRA+R G LLG L FL +A EL +++
Sbjct: 303 SNTGRGYVIRRLLRRALRHGYLLG--------LSDPFLHRLAPLVAELLGDFYPEMRENL 354
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
+ ++++ EE RF++TLE G K LD +L+ + G V L G++AF LYDT+GFP
Sbjct: 355 PAVEKQIRLEEERFLETLEGGLKRLDALLSGL-----KPGEV--LPGKEAFRLYDTYGFP 407
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKI----PDTE 511
+++T E+A E G VD +GF ME Q+ +S+AA + A + E++ TE
Sbjct: 408 LDLTVEIAAERGYGVDTEGFQKAMEEQQSRSRAAMAFEREIFKKGAQVLEELYAERGATE 467
Query: 512 FLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQG 571
FLGY+ L A+A V +LL + +++ G++V+V+L++TPFYAE GGQIGD+G L G
Sbjct: 468 FLGYNALEAEAEVLALLAGDQSLLEAGPGTEVQVVLDKTPFYAEGGGQIGDFGLLEWPGG 527
Query: 572 TNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLL 631
+ V+ +K+ +F+HK + EGVL VG V A+VDP+ R+ + +HTATHLL
Sbjct: 528 RAR------VETTRKTERGIFLHKARVEEGVLRVGERVRAVVDPR-RRDTERNHTATHLL 580
Query: 632 QAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKV 691
AAL+ V+G QAGSLVA DRLRFDF PL ELE +E L+N WI + +
Sbjct: 581 HAALRAVLGPHVRQAGSLVAPDRLRFDFTHPEPLKPEELERVELLVNRWIMADFPVTWRY 640
Query: 692 MALDDAKRAGAIAMFGEKY 710
M L++A++ GA+A+FGEKY
Sbjct: 641 MPLEEARKEGAMALFGEKY 659
>gi|89054478|ref|YP_509929.1| alanyl-tRNA synthetase [Jannaschia sp. CCS1]
gi|122498736|sp|Q28QV8.1|SYA_JANSC RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|88864027|gb|ABD54904.1| alanyl-tRNA synthetase [Jannaschia sp. CCS1]
Length = 884
Score = 558 bits (1439), Expect = e-156, Method: Compositional matrix adjust.
Identities = 305/680 (44%), Positives = 431/680 (63%), Gaps = 35/680 (5%)
Query: 48 SSGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRA 106
+S + IR FLD++ +GH V+PS+ LVP DPT++ +GM+QFK +F G R RA
Sbjct: 2 TSLNDIRSTFLDYFGRQGHAVVPSSPLVPRNDPTLMFVNSGMVQFKNLFTGVEKRDYVRA 61
Query: 107 ATSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLP 162
+SQ+C+R ND++NVG T+RHHTFFEMLGNFSFGDYFK++AI++AWE T +FGL
Sbjct: 62 TSSQKCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKEDAIRYAWELITKDFGLD 121
Query: 163 ANRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDF-- 220
RL+++VY DDEAFEIW K+VGVP + I R+ DNFW G TGPCGPC+EI+YD
Sbjct: 122 KARLYVTVYHTDDEAFEIW-KKVGVPEDRIIRIATSDNFWQMGPTGPCGPCTEIFYDHGE 180
Query: 221 HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKV 280
H G D RFIE +N+VFMQ + DG++ PL ++IDTG+GLERI +LQ
Sbjct: 181 HIWGGPPGSAEEDGDRFIEIWNIVFMQNEQFADGTMVPLDMQSIDTGMGLERIGALLQGS 240
Query: 281 PNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGR 340
+NY+TD + +++ + A+ S + N++ ++I DHLR+ +L++DGV PSN GR
Sbjct: 241 HDNYDTDTMRALMEAS---AHASSTDLDGDQNVHHRVIADHLRSTSFLIADGVMPSNDGR 297
Query: 341 GYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILE 400
GYV+RR++RRA+R LLG K L A + + + EL + I E
Sbjct: 298 GYVLRRIMRRAMRHAHLLGAKDPLMYRLVPALVSQMGQAYSELGQ--------AQALITE 349
Query: 401 ELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITK 460
LK EE RF QTL+RG KLLD D +++ E G++P G AF LYDT+GFP+++T+
Sbjct: 350 TLKLEEERFRQTLDRGLKLLD----DEVAKLPEDGNLP---GAAAFKLYDTYGFPLDLTQ 402
Query: 461 EVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSA--DLAEKIPDTEFLGYDTL 518
+ E G +VD GFD M Q+ +++AA + + D + D+AEK TEFLGYDT
Sbjct: 403 DALREQGRTVDTDGFDAAMAEQKAKARAAWSGSGDAADATIWFDIAEKNGVTEFLGYDTE 462
Query: 519 SAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAV 578
A+ V +L+V+G V KV+ DV + N+TPFYAESGGQ+GD G + +T V
Sbjct: 463 VAEGQVLALVVDGARVDKVASNQDVIFVTNQTPFYAESGGQVGDSGTI------RTETGV 516
Query: 579 VEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKV 638
+ V + +K G VF+H G + EG ++VG+ VD + R+ +H+ATHLL AL+
Sbjct: 517 LHVTETRKVAG-VFLHVGQVTEGTIKVGQGASLSVDHERRRYICANHSATHLLNEALRWA 575
Query: 639 IGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAK 698
IG Q GSL + DRLRFDF+ ++P+ EL ++E +N I ++T+VM DDA+
Sbjct: 576 IGDSVVQRGSLNSRDRLRFDFSHNKPMTADELAQVEAEVNDLITRNTAVETRVMTPDDAR 635
Query: 699 RAGAIAMFGEKYGEQVKISS 718
GA A+FGEKYG++V++ S
Sbjct: 636 ALGAQALFGEKYGDEVRVVS 655
>gi|334703005|ref|ZP_08518871.1| alanyl-tRNA synthetase [Aeromonas caviae Ae398]
Length = 874
Score = 558 bits (1439), Expect = e-156, Method: Compositional matrix adjust.
Identities = 305/683 (44%), Positives = 432/683 (63%), Gaps = 47/683 (6%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S IR FL+++ ++GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA
Sbjct: 4 STSEIRAAFLEYFRTQGHQVVSSSSLVPHNDPTLLFTNAGMNQFKDVFLGADKRAYHRAT 63
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
T+QRC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI++AWEF T LP
Sbjct: 64 TAQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAIRFAWEFLTGTLKLPK 123
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEI 216
RL ++VY DDEAF+IW KEVGVP + I R+G A DNFW G TGPCGPC+EI
Sbjct: 124 ERLLVTVYATDDEAFDIWEKEVGVPADRIVRIGDNKGAPYASDNFWAMGDTGPCGPCTEI 183
Query: 217 YYDFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERI 273
+YD H D G D RFIE +N+VFMQ+N++ DG++EPL + ++DTG+GLERI
Sbjct: 184 FYD-HGDHIWGGPPGSPEEDGDRFIEIWNVVFMQFNRQADGTMEPLPRPSVDTGMGLERI 242
Query: 274 ARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGV 333
+ I+Q V +NYE D+ +IKKA+E+ + D +N +L++I DH+R+ +L++DGV
Sbjct: 243 SAIMQGVHSNYEIDIFQALIKKAAEIVG-----TTDLSNQSLRVIADHIRSCAFLVADGV 297
Query: 334 FPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKA 393
PSN GRGYV+RR+IRRAVR GR LG + F AE A+++ + +++ A
Sbjct: 298 MPSNEGRGYVLRRIIRRAVRHGRKLGAT-------DVFFYKLAAELAVQMKD-VAAELIA 349
Query: 394 REQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFG 453
+ + L+ EE +FV+TL+RG LL+ +LA+ G + G+ F LYDT+G
Sbjct: 350 QLPLVERVLRIEEEQFVRTLDRGLLLLEDVLANL-------GDAKVIPGEVVFKLYDTYG 402
Query: 454 FPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFL 513
FP ++T +V E + +D +GF EME QR +++ A ++ ++ +D L + P F
Sbjct: 403 FPADLTADVVREREIGIDEEGFKAEMEKQRARAKEA-SSFGVNYNDVLKLDFETP---FT 458
Query: 514 GYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTN 573
GY LS V + +G V + G + ++L TPFYAESGGQ+GD G L V G
Sbjct: 459 GYKQLSQNTQVVGIYKDGVEVNGLIAGEEAVIVLAETPFYAESGGQVGDSGILKVDDG-- 516
Query: 574 QQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQA 633
+ V D +K+ G +HKG + G LE G EVEA+VD RQ ++H+ THLL A
Sbjct: 517 ----IFAVTDTQKA-GKAIIHKGYLELGTLEKGAEVEAVVDGDRRQAIALNHSVTHLLHA 571
Query: 634 ALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMA 693
AL++ +G+ +Q GSLV +R+RFDF+ L + IE L+N I + + T++M
Sbjct: 572 ALRQALGEHVTQKGSLVGAERMRFDFSHFEGLTMATIRRIEELVNAQIRANHEVATQLMG 631
Query: 694 LDDAKRAGAIAMFGEKYGEQVKI 716
L++AK AGA+A+FGEKY + V++
Sbjct: 632 LEEAKSAGAMALFGEKYEDDVRV 654
>gi|256003587|ref|ZP_05428576.1| alanyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
gi|385778113|ref|YP_005687278.1| alanyl-tRNA synthetase [Clostridium thermocellum DSM 1313]
gi|419723834|ref|ZP_14250938.1| alanyl-tRNA synthetase [Clostridium thermocellum AD2]
gi|419724817|ref|ZP_14251875.1| alanyl-tRNA synthetase [Clostridium thermocellum YS]
gi|255992378|gb|EEU02471.1| alanyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
gi|316939793|gb|ADU73827.1| alanyl-tRNA synthetase [Clostridium thermocellum DSM 1313]
gi|380771856|gb|EIC05718.1| alanyl-tRNA synthetase [Clostridium thermocellum YS]
gi|380780069|gb|EIC09763.1| alanyl-tRNA synthetase [Clostridium thermocellum AD2]
Length = 880
Score = 558 bits (1439), Expect = e-156, Method: Compositional matrix adjust.
Identities = 305/672 (45%), Positives = 434/672 (64%), Gaps = 27/672 (4%)
Query: 51 DSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATS 109
+ +R+RFL F+ S+GH LPS SL+P+ DP++LL +GM KP F G+ R T
Sbjct: 7 NELRERFLKFFESKGHLRLPSFSLIPQNDPSLLLINSGMAPLKPYFTGQEEPPRRRVTTC 66
Query: 110 QRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWIS 169
Q+CIRT D+ENVG+T+RH TFFEMLGNFSFGDYFK EAI WAWEF T + +P RLW+S
Sbjct: 67 QKCIRTPDIENVGKTARHGTFFEMLGNFSFGDYFKNEAIPWAWEFFTEDLKIPVERLWVS 126
Query: 170 VYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCS-- 227
+YEDDDEAFEIWNK+VG+P E I RMG D+NFW G TGPCGPCSEIY+D D+GC
Sbjct: 127 IYEDDDEAFEIWNKKVGLPPERIVRMGKDNNFWEHG-TGPCGPCSEIYFDRGEDKGCGKP 185
Query: 228 DVDLGDDT-RFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYET 286
D +G D RFIE +NLVF Q+NK++DGS LK NIDTG+GLER+A ++Q V N +E
Sbjct: 186 DCKVGCDCDRFIEVWNLVFTQFNKEEDGSYSRLKNPNIDTGMGLERLACVMQDVNNLFEV 245
Query: 287 DLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRR 346
D I ++ ++ V Y S+++T++++++I DH+R+ ++SDGV PSN GRGYV+RR
Sbjct: 246 DTIRRVLDYICKITGVEYG-SSEKTDVSIRVITDHIRSTTMMISDGVIPSNEGRGYVLRR 304
Query: 347 LIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREE 406
L+RRA R G+LLG ++ FL +A IE S ++ R + I + ++ EE
Sbjct: 305 LLRRAARHGKLLG--------MDRPFLSDVASVVIEESKGAYPELAERAENIKKVIRIEE 356
Query: 407 LRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEH 466
+F +T+++G +L + + + TR+ G +SG F L+ T+GFPV++T+E+AEE+
Sbjct: 357 EKFEETIDQGLVILSKYIEE----TRKKGE-KVISGDVVFELHGTYGFPVDLTREIAEEN 411
Query: 467 GVSVDMKGFDIEMENQRRQSQAAHNAVKLSV--DDSADLAEKIPDTEFLGYDTLSAKAIV 524
G+ VD +GF +M+ + ++ + + + S DD +K TEFLGY A A V
Sbjct: 412 GLGVDEEGFREKMKEHQNLAREDYQSKQGSAWGDDIYSKLDKSVKTEFLGYTESEATARV 471
Query: 525 ESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDV 584
++ + V + KG V V+L+RTPFYAESGGQ+GD G + + A V+V D
Sbjct: 472 LYIIKEDQVVDEAQKGDSVTVILDRTPFYAESGGQVGDKGLI------EAEGARVKVLDC 525
Query: 585 KKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETS 644
KK+ ++H G I EG L G EV+A +D K R +HT THLL AL+ V+G +
Sbjct: 526 KKTNDGKYLHIGEIEEGTLRNGMEVKATIDKKRRMAIARNHTTTHLLHKALRNVLGSHVN 585
Query: 645 QAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIA 704
QAGSLV DRLRFDF + E++ +E +N I ++ + + M++D+A++ GA A
Sbjct: 586 QAGSLVEPDRLRFDFTHFSAMTPEEIKSVEDQVNEKILESIAVDIREMSIDEARKMGATA 645
Query: 705 MFGEKYGEQVKI 716
+FGEKYG+ V++
Sbjct: 646 LFGEKYGDVVRV 657
>gi|281416686|ref|ZP_06247706.1| alanyl-tRNA synthetase [Clostridium thermocellum JW20]
gi|281408088|gb|EFB38346.1| alanyl-tRNA synthetase [Clostridium thermocellum JW20]
Length = 880
Score = 558 bits (1439), Expect = e-156, Method: Compositional matrix adjust.
Identities = 305/672 (45%), Positives = 434/672 (64%), Gaps = 27/672 (4%)
Query: 51 DSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATS 109
+ +R+RFL F+ S+GH LPS SL+P+ DP++LL +GM KP F G+ R T
Sbjct: 7 NELRERFLKFFESKGHLRLPSFSLIPQNDPSLLLINSGMAPLKPYFTGQEEPPRRRVTTC 66
Query: 110 QRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWIS 169
Q+CIRT D+ENVG+T+RH TFFEMLGNFSFGDYFK EAI WAWEF T + +P RLW+S
Sbjct: 67 QKCIRTPDIENVGKTARHGTFFEMLGNFSFGDYFKNEAIPWAWEFFTEDLKIPVERLWVS 126
Query: 170 VYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCS-- 227
+YEDDDEAFEIWNK+VG+P E I RMG D+NFW G TGPCGPCSEIY+D D+GC
Sbjct: 127 IYEDDDEAFEIWNKKVGLPPERIVRMGKDNNFWEHG-TGPCGPCSEIYFDRGEDKGCGKP 185
Query: 228 DVDLGDDT-RFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYET 286
D +G D RFIE +NLVF Q+NK++DGS LK NIDTG+GLER+A ++Q V N +E
Sbjct: 186 DCKVGCDCDRFIEVWNLVFTQFNKEEDGSYSRLKNPNIDTGMGLERLACVMQDVNNLFEV 245
Query: 287 DLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRR 346
D I ++ ++ V Y S+++T++++++I DH+R+ ++SDGV PSN GRGYV+RR
Sbjct: 246 DTIRRVLDYICKITGVEYG-SSEKTDVSIRVITDHIRSTTMMISDGVIPSNEGRGYVLRR 304
Query: 347 LIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREE 406
L+RRA R G+LLG ++ FL +A IE S ++ R + I + ++ EE
Sbjct: 305 LLRRAARHGKLLG--------MDRPFLSDVASVVIEESKGAYPELAERAENIKKVIRIEE 356
Query: 407 LRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEH 466
+F +T+++G +L + + + TR+ G +SG F L+ T+GFPV++T+E+AEE+
Sbjct: 357 EKFEETIDQGLVILSKYIEE----TRKKGE-KVISGDVVFELHGTYGFPVDLTREIAEEN 411
Query: 467 GVSVDMKGFDIEMENQRRQSQAAHNAVKLSV--DDSADLAEKIPDTEFLGYDTLSAKAIV 524
G+ VD +GF +M+ + ++ + + + S DD +K TEFLGY A A V
Sbjct: 412 GLGVDEEGFREKMKEHQNLAREDYQSKQGSAWGDDIYSKLDKSVKTEFLGYTESEATARV 471
Query: 525 ESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDV 584
++ + V + KG V V+L+RTPFYAESGGQ+GD G + + A V+V D
Sbjct: 472 LYIIKEDQVVDEAQKGESVTVILDRTPFYAESGGQVGDKGLI------EAEGARVKVLDC 525
Query: 585 KKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETS 644
KK+ ++H G I EG L G EV+A +D K R +HT THLL AL+ V+G +
Sbjct: 526 KKTNDGKYLHIGEIEEGTLRNGMEVKATIDKKRRMAIARNHTTTHLLHKALRNVLGSHVN 585
Query: 645 QAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIA 704
QAGSLV DRLRFDF + E++ +E +N I ++ + + M++D+A++ GA A
Sbjct: 586 QAGSLVEPDRLRFDFTHFSAMTPEEIKSVEDQVNEKILESIAVDIREMSIDEARKMGATA 645
Query: 705 MFGEKYGEQVKI 716
+FGEKYG+ V++
Sbjct: 646 LFGEKYGDVVRV 657
>gi|51893138|ref|YP_075829.1| alanyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863]
gi|59798515|sp|Q67MV8.1|SYA_SYMTH RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|51856827|dbj|BAD40985.1| alanyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863]
Length = 872
Score = 558 bits (1439), Expect = e-156, Method: Compositional matrix adjust.
Identities = 307/680 (45%), Positives = 436/680 (64%), Gaps = 35/680 (5%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR++F+DF+ S+GH +PS+SLVP DPT+L T AGM QFK FLG R+ RA T+Q+
Sbjct: 6 IRQKFIDFFKSKGHVHVPSSSLVPHNDPTLLFTNAGMNQFKDTFLGLEKREYTRAVTAQK 65
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND++ VG T+RHHTFFEMLGNFSFGDYFK++A+ +AWEF T GLP +R
Sbjct: 66 CVRAGGKHNDLDEVGFTARHHTFFEMLGNFSFGDYFKEDALAYAWEFITSPEWLGLPKDR 125
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRG 225
LW+S+Y+DD++AF++W+ +VGVP + I R+G DNFW G TGPCGPCSEI++D P+
Sbjct: 126 LWVSIYKDDEQAFDVWHNKVGVPADRIVRLGEKDNFWRMGDTGPCGPCSEIFWDMGPEYA 185
Query: 226 C-----SDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKV 280
C +D R+ EF+N VFMQYN+ +G L PL++ +DTGLGLER+A I+Q V
Sbjct: 186 CDHPDGCRIDTCGCDRWREFWNNVFMQYNQTPEG-LVPLERTGVDTGLGLERMATIMQGV 244
Query: 281 PNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGR 340
+N++ DL PI + EL+ Y + + ++I DH R +L++DGV SN GR
Sbjct: 245 WSNWDIDLWQPIFARIHELSGKKY-EGEGPEAVAFRVIADHARCCTFLIADGVRFSNEGR 303
Query: 341 GYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILE 400
GYV+RR++RRAVR GR+LG F+ +A ++ +V+ R I +
Sbjct: 304 GYVMRRILRRAVRFGRVLGFAE--------PFIWKVAGAVADVMGDAYPEVRERLPVIQD 355
Query: 401 ELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITK 460
EL+REE RF++TLE+G L+++LA R R+ G +SGQDAF+LYDT+GFP++I +
Sbjct: 356 ELRREEERFLRTLEQGMNRLEEILA----RMRQKGETV-ISGQDAFVLYDTYGFPLDIVR 410
Query: 461 EVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDS--ADLAEKIPDTEFLGYDTL 518
+VA E G +VD +G+ M QR +++AA + ++ S A E + T F+GY L
Sbjct: 411 DVAREQGFTVDEQGYQAAMAEQRARARAARDVSYITEVQSRIAGHLEGVAPTRFVGYTEL 470
Query: 519 SAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAV 578
+ + V ++ +GS V ++L+RTPFYAE GGQ+GD G + V G
Sbjct: 471 AGEGRVLAVFDQEGNATGAGEGSSVIIVLDRTPFYAEGGGQVGDTGQI-VAPGLR----- 524
Query: 579 VEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKV 638
VEV+D +K +H GT++EG LEVG++VEA VD + R+ + +HTATHLL AL++V
Sbjct: 525 VEVEDCRKLPSGHHLHYGTVQEGFLEVGQQVEARVDARKRKDTQKNHTATHLLHKALREV 584
Query: 639 IGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAK 698
+G QAGSLVA DRLRFDF P+ ++ +E +IN I A + M LD+A+
Sbjct: 585 LGTHVQQAGSLVAPDRLRFDFTHTGPMTPEQIAAVEEMINAEIEAAEPVTWTEMPLDEAR 644
Query: 699 RAGAIAMFGEKYGEQVKISS 718
GA+A+FGEKYGE V++ S
Sbjct: 645 ALGAMALFGEKYGEIVRVVS 664
>gi|296104368|ref|YP_003614514.1| alanyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC
13047]
gi|295058827|gb|ADF63565.1| alanyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC
13047]
Length = 875
Score = 558 bits (1439), Expect = e-156, Method: Compositional matrix adjust.
Identities = 318/689 (46%), Positives = 435/689 (63%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQYAWELLTGENWFNLPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NYE DL +IK +E+ + D N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYEIDLFSTLIKAVAEVTGAT-----DLNNKSLRVIADHIRSCAFLIADGVIP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRA+R G +LG K L G + + EL K ++
Sbjct: 302 SNENRGYVLRRIIRRAIRHGNMLGAKDTFFYKLVGPLIGVMGSAGDEL--------KRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLKGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQ------AAHNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRARESSGFGADYNAM-IRVDSA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GY+ L V +L V+GK V +S G D V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYEALELTGKVTALFVDGKAVDSISAGQDAVVILDKTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
QG +V + + +++G H G + G L+VG V+A VD R R +++H+ATH
Sbjct: 513 QGNGFSFSVNDTQKYGQAIG----HLGKLVSGSLKVGEGVQANVDEARRARIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G +Q GSLV LRFDF+ + +E+ +E L+N I ++T
Sbjct: 569 LMHAALREVLGTHVAQKGSLVNDKVLRFDFSHFEAMKPSEIRAVEDLVNAQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M LD AK+ GA+A+FGEKY ++V++ S
Sbjct: 629 HIMDLDAAKKKGAMALFGEKYDDRVRVLS 657
>gi|148653409|ref|YP_001280502.1| alanyl-tRNA synthetase [Psychrobacter sp. PRwf-1]
gi|205830185|sp|A5WFW1.1|SYA_PSYWF RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|148572493|gb|ABQ94552.1| alanyl-tRNA synthetase [Psychrobacter sp. PRwf-1]
Length = 903
Score = 558 bits (1439), Expect = e-156, Method: Compositional matrix adjust.
Identities = 306/681 (44%), Positives = 434/681 (63%), Gaps = 48/681 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
+RK F+DF+ S+ H +PS+SLVP DPT+L T AGM QFK FLG R RA TSQ+
Sbjct: 23 VRKAFIDFFVSKQHTHVPSSSLVPYNDPTLLFTNAGMNQFKDCFLGIDKRDYTRAVTSQK 82
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND++NVG T+RHHTFFEMLGNFSFGDYFKK AI +AWEF T + GL A++
Sbjct: 83 CVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKKSAIAYAWEFLTSKQWLGLDADK 142
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
L++++YE DDEAF+IW++++G+ E I R+G A DNFW G TGPCGPCSE++Y
Sbjct: 143 LYVTIYESDDEAFDIWHQDIGLAAERIIRIGDNKGAPYASDNFWAMGDTGPCGPCSEVFY 202
Query: 219 DF--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARI 276
D H + G D R+IE +N VFMQ+N++ DG++EPL ++DTG+GLERI+ I
Sbjct: 203 DHGEHVEGGLPGTPEEDGDRYIEVWNCVFMQFNRQPDGTMEPLPAPSVDTGMGLERISAI 262
Query: 277 LQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPS 336
LQ V +NYE DL +I A+++ + ND +LK++ DH+RA+ +L++DGV PS
Sbjct: 263 LQGVHSNYEIDLFVNLINSAADIIGIK----ND-NQASLKVVADHIRAVSFLIADGVLPS 317
Query: 337 NIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQ 396
N GRGYV+RR+IRRAVR G LG + + F +A E+ V+ ++
Sbjct: 318 NEGRGYVLRRIIRRAVRHGNKLGAE-------DSFFYKMVAPLVKEMGDAYPQLVE-KQA 369
Query: 397 RILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPV 456
I + +++EE++F +TL +G +LLD L + +SG V LSG+ AF LYDT+GFPV
Sbjct: 370 FIEKAIEKEEVQFAKTLAQGLRLLDSEL-----ESLKSGDV--LSGEAAFKLYDTYGFPV 422
Query: 457 EITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYD 516
++T ++ E G+ +D GFD +M QR Q A +A K VD SA + + P TEF+GY+
Sbjct: 423 DLTADITRERGIGIDEAGFDEQMNIQR---QRARDAGKFDVDYSAAIKVETP-TEFVGYE 478
Query: 517 TLSAKAI-VESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
L K + + L +GK V +++G + ++L+RTPFYAE GGQ+G+ G + + G
Sbjct: 479 QLDEKEVNIIGLYQDGKEVEVLNEGDEGVIVLDRTPFYAEGGGQVGEMGEIRTSSG---- 534
Query: 576 TAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAAL 635
V V+D KKS G F+H G + G L+ + +A V +R + +H+ATHLL AAL
Sbjct: 535 --VFNVEDTKKS-GQAFIHHGVVNMGSLQKSQTADAQVVSAIRSASARNHSATHLLHAAL 591
Query: 636 KKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALD 695
+KV+G SQ GSLV+ + LRFDF++ + +L IERL+N I ++M +D
Sbjct: 592 RKVLGDSVSQKGSLVSSEMLRFDFSYDNAVSQKDLATIERLVNEQIQANVETHIELMNID 651
Query: 696 DAKRAGAIAMFGEKYGEQVKI 716
DA GA A+FGEKYGE V++
Sbjct: 652 DAMAKGAAALFGEKYGETVRV 672
>gi|421856940|ref|ZP_16289298.1| alanyl-tRNA synthetase [Acinetobacter radioresistens DSM 6976 =
NBRC 102413]
gi|403187687|dbj|GAB75499.1| alanyl-tRNA synthetase [Acinetobacter radioresistens DSM 6976 =
NBRC 102413]
Length = 897
Score = 558 bits (1439), Expect = e-156, Method: Compositional matrix adjust.
Identities = 315/703 (44%), Positives = 442/703 (62%), Gaps = 57/703 (8%)
Query: 43 SQDFPSSGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPR 101
S F +S + IR+ FL ++ S+GH + S+SLVP DPT+L T AGM QFK FLG R
Sbjct: 2 STRFMTSAE-IREAFLRYFESQGHTRVASSSLVPANDPTLLFTNAGMNQFKDCFLGAEKR 60
Query: 102 QVPRAATSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTV 157
RA +SQ+C+R ND++NVG T+RHHTFFEMLGNFSFGDYFK++AI++AWEF T
Sbjct: 61 DYVRAVSSQKCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKRDAIKFAWEFLTS 120
Query: 158 E--FGLPANRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATG 208
E LP +RL+ +VY DDEAF+IWNKE+G+ E I R+G A DNFW G TG
Sbjct: 121 EQWLALPKDRLYATVYHTDDEAFDIWNKEIGLDAERIIRIGDNKGEKYASDNFWAMGDTG 180
Query: 209 PCGPCSEIYYDFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNID 265
PCGPCSEI+YD H D G D RFIE +N VFMQ+N+ DG L L ++D
Sbjct: 181 PCGPCSEIFYD-HGDHIWGGLPGTPEEDGDRFIEIWNNVFMQFNRTADGVLHALPAPSVD 239
Query: 266 TGLGLERIARILQKVPNNYETDLIFPIIKKASELANVSYA----QSNDRTN-----LNLK 316
TG+GLERI+ +LQ V +NYE DL ++K A+E+ V A ++ ++ +LK
Sbjct: 240 TGMGLERISAVLQHVNSNYEIDLFQHLLKAAAEIIGVDTASLEAEAKEKNTPVQYPASLK 299
Query: 317 IIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSI 376
++ DH R+ +L++DGV PSN GRGYV+RR+IRRAVR G LG G F +
Sbjct: 300 VVADHARSCCFLIADGVNPSNEGRGYVLRRIIRRAVRHGNKLGATG--------TFFYKM 351
Query: 377 AEKAIELSTHIDSDVKAREQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGS 436
+ IE+ +++A + RI L +EE +F +TLE+G KLL+ L T+ GS
Sbjct: 352 LQPLIEVMGTAYPELEANKARIEAALIKEEEQFAKTLEQGLKLLEGEL------TQLKGS 405
Query: 437 VPRLSGQDAFLLYDTFGFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLS 496
+ + G+ F LYDT+GFPV++T ++A E +S+D GF+ EM QR Q A A K +
Sbjct: 406 I--IPGEIVFKLYDTYGFPVDLTADIARERDLSIDEAGFEKEMAAQR---QRAREAGKFA 460
Query: 497 VDDSADLAEKIPD-TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAE 555
VD ++ + K+ D TEF GYD + + ++ +G V +V++G + ++LN+TPFYAE
Sbjct: 461 VDYNSIV--KVEDETEFSGYDATEGQGQIIAIYKDGTLVDEVTEGDEALIVLNQTPFYAE 518
Query: 556 SGGQIGDYGFLYVTQGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDP 615
SGGQIGD G +T + EV+D KKS G+ FVH+G + G L+V + VEA V
Sbjct: 519 SGGQIGDTGIF------KNETGIFEVQDTKKS-GNAFVHQGIVTMGNLKVTQNVEATVKA 571
Query: 616 KLRQRAKVHHTATHLLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIER 675
+LR +H+ATHLL AAL++++G Q GSLVA D LRFDF +P+ +L++IER
Sbjct: 572 ELRAATARNHSATHLLHAALRQILGSHVQQKGSLVASDILRFDFANDQPVTFEQLQQIER 631
Query: 676 LINGWIGDANLLQTKVMALDDAKRAGAIAMFGEKYGEQVKISS 718
L+N + + T+++ ++ AK GA+ +FGEKYG +V++ S
Sbjct: 632 LVNAEVIANTAVTTELLDIETAKTKGAMMLFGEKYGSEVRVLS 674
>gi|77359489|ref|YP_339064.1| alanyl-tRNA synthetase [Pseudoalteromonas haloplanktis TAC125]
gi|123589570|sp|Q3ILF3.1|SYA_PSEHT RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|76874400|emb|CAI85621.1| alanyl-tRNA synthetase [Pseudoalteromonas haloplanktis TAC125]
Length = 868
Score = 558 bits (1439), Expect = e-156, Method: Compositional matrix adjust.
Identities = 301/672 (44%), Positives = 426/672 (63%), Gaps = 42/672 (6%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR++FLDF+AS+ H+V+PS+SL+P D T+L AGM+QFK +FLG R RA +SQR
Sbjct: 9 IRQQFLDFFASKQHQVVPSSSLIPGNDATLLFNNAGMVQFKDVFLGAESRPYTRATSSQR 68
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI++AW+F T E LP +L
Sbjct: 69 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAIKFAWQFLTEEVKLPKEKLL 128
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDF--HPDRG 225
+++Y DD+EAF W+ ++G+P + I R+ DNFW+ G TGPCGPCSEI+YD H G
Sbjct: 129 VTIYHDDEEAFNYWSNDIGLPADRIIRIATADNFWSMGDTGPCGPCSEIFYDHGEHIWGG 188
Query: 226 CSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYE 285
D RFIE +NLVFMQYN+++DG++ PL ++++DTG+GLERIA ILQ V +NYE
Sbjct: 189 PPGSPEEDGDRFIEIWNLVFMQYNRQNDGTMLPLPKQSVDTGMGLERIAAILQGVHSNYE 248
Query: 286 TDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVR 345
DL +I A+ + N + D + +L+++ DH+R+ +L+SDGV PSN GRGYV+R
Sbjct: 249 IDLFKGLIAAAASVTN-----AQDMDDKSLRVVADHIRSCAFLISDGVMPSNEGRGYVLR 303
Query: 346 RLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKR- 404
R+IRRAVR G LG +G L A + + + EL A++Q I+E++ R
Sbjct: 304 RIIRRAVRHGNKLGAQGAFFYKLVAALIEQMGQAYPEL---------AKQQEIIEKVLRI 354
Query: 405 EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAE 464
EE +F +TLERG +L++ L+D G V + G F LYDT+GFP ++T +VA
Sbjct: 355 EEEQFGKTLERGLAILEESLSDL------KGDV--IPGDLVFKLYDTYGFPADLTADVAR 406
Query: 465 EHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTLSAKAIV 524
E +++D KGF+ M QR+ +Q A K D + L T + GY T S A V
Sbjct: 407 ERQMTIDNKGFEECMAVQRKTAQ---QAGKFGADYNDQLKSD-KQTTYKGYTTTSHSATV 462
Query: 525 ESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDV 584
+ + V + G V+L+RTPFYAESGGQ+GD G + V G T +
Sbjct: 463 VEVFAGSESVSLLEDGQKGIVILDRTPFYAESGGQVGDTGVISVAGGEFTVTNTTK---- 518
Query: 585 KKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETS 644
LG+ F H G + +G + + +VEA +D R+R K +HTATH+L L++++G+
Sbjct: 519 ---LGNAFAHHGIV-QGRIGLNDKVEATIDDARRERIKKNHTATHILHETLRQLLGEHVG 574
Query: 645 QAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIA 704
Q GSLV +RLRFDF+ + EL EIER++N I L T++MA+DDAK GA+A
Sbjct: 575 QKGSLVQAERLRFDFSHFEAVTKEELREIERVVNDEIRCNFALSTELMAIDDAKAKGAMA 634
Query: 705 MFGEKYGEQVKI 716
+FGEKY ++V++
Sbjct: 635 LFGEKYDDEVRV 646
>gi|456064040|ref|YP_007503010.1| Alanyl-tRNA synthetase [beta proteobacterium CB]
gi|455441337|gb|AGG34275.1| Alanyl-tRNA synthetase [beta proteobacterium CB]
Length = 874
Score = 558 bits (1439), Expect = e-156, Method: Compositional matrix adjust.
Identities = 301/682 (44%), Positives = 431/682 (63%), Gaps = 49/682 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ +LD++A +GH+++PS+ +VP +DPT+L T AGM QFK +FLG R RA T+Q+
Sbjct: 6 IRQAYLDYFAQKGHQIVPSSPVVPGDDPTLLFTNAGMNQFKDVFLGFDKRPYNRATTAQK 65
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
CIR ND++NVG T+RHHTFFEMLGNFSFGDYFKK+AIQ+AW T F LP +L
Sbjct: 66 CIRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKKDAIQFAWGLLTEVFKLPEEKLL 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYYDF 220
++VY +DDEA+EIWNK++GVP E I R+G A DNFW G TGPCGPC+EI+YD
Sbjct: 126 VTVYAEDDEAYEIWNKQIGVPTERIIRIGDNKGGRYASDNFWMMGDTGPCGPCTEIFYDH 185
Query: 221 HPD-----RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
P G D D GD R+IE +N VFMQ+N+ + G++ PL + ++DTG+GLERIA
Sbjct: 186 GPHIAGGPPGSPDED-GD--RYIEIWNNVFMQFNRDEAGNMHPLPKPSVDTGMGLERIAA 242
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NYE DL ++K A E + + ++ D ++ +LK+I DH+RA +++ DGV P
Sbjct: 243 VLQHVHSNYEIDLFVNLLKAAKEAVDAAGGENCDPSSPSLKVIADHIRACSFIVVDGVIP 302
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
N GRGYV+RR+ RRA+R G LG R +P++ K + L+ +++A +
Sbjct: 303 GNAGRGYVLRRITRRAIRHGYKLG----ARKPFFYKLVPALV-KEMGLAY---PELQAAK 354
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + +K+EE RF QT+ G ++L+ LA G + G+ AF L+DTFGFP
Sbjct: 355 DKVSDVIKQEEERFFQTIANGMEILEGALA---------GGAKTIDGETAFRLHDTFGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGY 515
+++T +V E V+VD +GFD+ M+ QR Q++AA K V + + K T+F GY
Sbjct: 406 LDLTADVCRERDVTVDAEGFDLAMQKQRDQARAAG---KFKVAQGLEYSGK--PTQFHGY 460
Query: 516 DTLSAK-AIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQ 574
DTL + A V +L V+G V V G V+L+ TPFYAESGGQ+GD G L
Sbjct: 461 DTLKHEGAKVTALYVDGSAVQSVKAGDAAVVVLDNTPFYAESGGQVGDKGEL------RN 514
Query: 575 QTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAA 634
+ V+D K VF H+G I+EG L+VG + A+VD + R +H+ATH+L A
Sbjct: 515 EAVRFAVEDTFKIQADVFGHQGEIQEGELKVGDAINALVDVQQRTETMRNHSATHILHKA 574
Query: 635 LKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMAL 694
L++V+G Q GSLV + RFDF + P+ E+ +E ++N I KVM+L
Sbjct: 575 LREVLGDHVQQKGSLVDASKTRFDFTHNAPITAQEIRRVEDIVNAEILANTATSGKVMSL 634
Query: 695 DDAKRAGAIAMFGEKYGEQVKI 716
DDA++ GA+ +FGEKYG++V++
Sbjct: 635 DDAQKTGAMMLFGEKYGDEVRV 656
>gi|358466727|ref|ZP_09176518.1| hypothetical protein HMPREF9093_00992 [Fusobacterium sp. oral taxon
370 str. F0437]
gi|357068740|gb|EHI78727.1| hypothetical protein HMPREF9093_00992 [Fusobacterium sp. oral taxon
370 str. F0437]
Length = 867
Score = 558 bits (1438), Expect = e-156, Method: Compositional matrix adjust.
Identities = 293/674 (43%), Positives = 434/674 (64%), Gaps = 35/674 (5%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
+G+ IR++F++F+ + HK SASL+P+DPT+LLT+AGM+ FKP FLG+ PR T
Sbjct: 3 TGNEIREKFIEFFMQKQHKHFESASLIPDDPTLLLTVAGMVPFKPYFLGQKEAPYPRVTT 62
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
Q+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFK+EAI W+WEF T L ++LW+
Sbjct: 63 YQKCIRTNDLENVGRTARHHTFFEMLGNFSFGDYFKEEAIAWSWEFVTEVLKLNKDKLWV 122
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYD----FHPDR 224
+V+ DDEA IW ++ P E I RMG +N+W++G TG CGPCSEI+ D + D
Sbjct: 123 TVFTTDDEAERIWIEKCNFPRERIVRMGESENWWSAGPTGSCGPCSEIHVDLGVQYGGDE 182
Query: 225 GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNY 284
D G D RFIE +NLVF ++N+ +DGSLEPL +KNIDTG GLERIA ++Q NN+
Sbjct: 183 NSKIGDEGTDNRFIEIWNLVFTEWNRMEDGSLEPLPKKNIDTGAGLERIAAVVQGKANNF 242
Query: 285 ETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVV 344
ETDL+FPI+++A+++ Y +S++ TN +LK+I DH RA+ +L++DGV PSN GRGY++
Sbjct: 243 ETDLLFPILEEAAKITGSQYGKSSE-TNFSLKVITDHARAVTFLVNDGVIPSNEGRGYIL 301
Query: 345 RRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKR 404
RR++RRAVR GRLLG K F+ + +K +E D+K + I + +K
Sbjct: 302 RRILRRAVRHGRLLGYK--------DLFMYKMVDKVVERFEVAYPDLKKNLENIRKIVKI 353
Query: 405 EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAE 464
EE +F TL++G +L++Q + + L+ + +L G+ +F LYDT+GFP E+T+E+AE
Sbjct: 354 EEEKFSNTLDQGIQLVNQEIDNLLANGKN-----KLDGEISFKLYDTYGFPYELTEEIAE 408
Query: 465 EHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDS--ADLAEKIPDTEFLGYDTLSAKA 522
E GV+V + F+ +ME Q+ ++++A V DS D +K T+F GY+ + +A
Sbjct: 409 ERGVTVLREEFEAKMEEQKEKARSAREVVMEKGQDSFIEDFYDKHGVTKFTGYENVQDEA 468
Query: 523 IVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVK 582
LL + + +K ++ ++TPFYAESGGQ+GD G +Y + + V + K
Sbjct: 469 ---KLLSS-----RETKDGKYLLIFDKTPFYAESGGQVGDQGRIYSDDFSAKVLDVQKQK 520
Query: 583 DVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQE 642
D +F+H I +G E + + V+ R +HTATHLL AL++V+G
Sbjct: 521 D-------IFIHTVEIEKGGAEENKIYKLEVNLLRRLDTAKNHTATHLLHKALREVVGTH 573
Query: 643 TSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGA 702
QAGSLV D+LRFDF+ + + +L +IE ++N I + + ++++AK GA
Sbjct: 574 VQQAGSLVDPDKLRFDFSHYEAVTAEQLAKIENIVNEKIREGIEVVVSHHSIEEAKNLGA 633
Query: 703 IAMFGEKYGEQVKI 716
+ +FG+KYGE V++
Sbjct: 634 MMLFGDKYGEVVRV 647
>gi|343516972|ref|ZP_08753990.1| alanyl-tRNA synthetase [Vibrio sp. N418]
gi|342794784|gb|EGU30538.1| alanyl-tRNA synthetase [Vibrio sp. N418]
Length = 860
Score = 558 bits (1438), Expect = e-156, Method: Compositional matrix adjust.
Identities = 307/687 (44%), Positives = 428/687 (62%), Gaps = 51/687 (7%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S D +R FL F+ S+GH+++ S+SLVP DPT+L T AGM QFK FLG R RA
Sbjct: 4 STDEVRNAFLKFFESKGHQIVESSSLVPHNDPTLLFTNAGMNQFKDCFLGLEKRAYTRAT 63
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
T+QRC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI +AWEF T LP
Sbjct: 64 TAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIAFAWEFLTETLQLPK 123
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG--------ADDNFWNSGATGPCGPCSE 215
+RL +++YE DDEAF+IWN++VG+P + I R+G DNFW G TGPCGPC+E
Sbjct: 124 DRLLVTIYETDDEAFDIWNQKVGIPADRIIRIGDKKGGKPFESDNFWQMGDTGPCGPCTE 183
Query: 216 IYYDFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLER 272
I+YD H D G D RFIE +N VFMQ+N++ DG++EPL + ++DTG+G+ER
Sbjct: 184 IFYD-HGDHIWGGRPGTPEEDGDRFIEIWNNVFMQFNRQADGTMEPLPKPSVDTGMGIER 242
Query: 273 IARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDG 332
I+ I+Q V +NYE D+ +IK +EL D +N +L++I DH+R+ +L+ DG
Sbjct: 243 ISAIMQGVHSNYEIDVFQALIKATAELIGCE-----DLSNQSLRVIADHIRSCSFLIVDG 297
Query: 333 VFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVK 392
V PSN GRGYV+RR+IRRAVR G +G +G L G + EL
Sbjct: 298 VMPSNEGRGYVLRRIIRRAVRHGNKIGAQGVFFHKLVGVLAEIMGTAGEELK-------- 349
Query: 393 AREQRILEELKR-EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDT 451
R+Q ++E++ R EE F +TLERG +L++ L D L GSV L G+ F LYDT
Sbjct: 350 -RQQALVEKVLRIEEENFGRTLERGMTILNEAL-DNL-----DGSV--LDGETVFKLYDT 400
Query: 452 FGFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTE 511
+GFP ++T +VA E ++D +GF+ ME QR Q A A + D +A + + +TE
Sbjct: 401 YGFPADLTNDVAREREFAIDEEGFEKAMEEQR---QRAREAGQFGTDYNAAIKTDV-ETE 456
Query: 512 FLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQG 571
F GY ++++ +L V G V +S G ++L TPFYAESGGQ GD G L G
Sbjct: 457 FSGYTGTEGESVIAALFVEGNEVDSLSAGDKAIIILEETPFYAESGGQSGDAGVLKTESG 516
Query: 572 TNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLL 631
+ V+D +K LG+ H G + EGV G + A+VD R ++H+ATHLL
Sbjct: 517 ------LFTVEDTQK-LGNAIAHHGVLAEGVFAKGDKAHAMVDAVRRTAITLNHSATHLL 569
Query: 632 QAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKV 691
AAL+KV+G+ +Q GSLV D LRFDF+ + EL+E+ER++N + + ++T V
Sbjct: 570 HAALRKVLGEHVTQKGSLVKADNLRFDFSHLEGVTAAELKEVERIVNAQVRRNHDIETNV 629
Query: 692 MALDDAKRAGAIAMFGEKYGEQVKISS 718
M ++ AK+ GA+A+FGEKY ++V++ S
Sbjct: 630 MDIESAKQKGAMALFGEKYDDEVRVLS 656
>gi|288940831|ref|YP_003443071.1| alanyl-tRNA synthetase [Allochromatium vinosum DSM 180]
gi|288896203|gb|ADC62039.1| alanyl-tRNA synthetase [Allochromatium vinosum DSM 180]
Length = 867
Score = 558 bits (1438), Expect = e-156, Method: Compositional matrix adjust.
Identities = 289/671 (43%), Positives = 424/671 (63%), Gaps = 38/671 (5%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
+R FLD++ R H+ + S+ L+P DPT+L T AGM+QFK FLG+ R RA +SQR
Sbjct: 7 LRASFLDYFEQRQHERVASSPLIPANDPTLLFTNAGMVQFKDAFLGRERRASNRAVSSQR 66
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK+EAI++AW++ T LP RLW
Sbjct: 67 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKREAIEYAWDYLTRVLALPPERLW 126
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCS 227
++V+E+DDEA IW KE+GV + R GA DNFW+ G TGPCGPCSEI+YD P
Sbjct: 127 VTVFEEDDEAAGIWLKEIGVDPQRFSRCGAKDNFWSMGDTGPCGPCSEIFYDHGPAIPGG 186
Query: 228 DVDLGDD--TRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYE 285
D+ R++E +NLVFMQ+N+ DG++ PL + ++DTG+GLER+A ++Q V +NYE
Sbjct: 187 PPGSPDEDGDRYVEIWNLVFMQFNRDADGNMTPLPRPSVDTGMGLERLAAVMQGVHSNYE 246
Query: 286 TDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVR 345
DL +I+ A++ + D + +L++I DH+R+ +L++DGV P N GRGYV+R
Sbjct: 247 IDLFRHLIEAAAQATGCT-----DLADKSLRVIADHIRSTAFLITDGVTPGNEGRGYVLR 301
Query: 346 RLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKRE 405
R++RRA+R G LG F ++ E +++A + + +K E
Sbjct: 302 RIMRRAIRHGYRLGCS--------TPFFHTLVEPLAREMGDAYPELRASQSHVERLVKLE 353
Query: 406 ELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEE 465
E RF +TLE G +LLD+ +AD S ++ G+ F LYDT+GFPV++T ++A E
Sbjct: 354 EERFAETLEHGMRLLDEAIADL--------SGDQIPGETVFKLYDTYGFPVDLTADIARE 405
Query: 466 HGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTLSAKAIVE 525
G+++D+ GF+ ME Q+ +++AA D E T+F GYD + +A +
Sbjct: 406 RGLTLDVAGFEQAMERQKERARAASQFGSAQTLDIQIQGE----TDFCGYDRVQEEATIV 461
Query: 526 SLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVK 585
+L G+ + G + V+L+R+PFY ESGGQ+GD G+L N +TA V+D +
Sbjct: 462 ALYRGGESCDALEAGEEGLVILDRSPFYGESGGQVGDRGWL------NTETARFGVQDTQ 515
Query: 586 KSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQ 645
K V VH G + EG L VG V+A VD R+ ++H+ATHLL AAL++V+G Q
Sbjct: 516 KKGDGVLVHVGRVEEGALTVGDRVDARVDADRRRATALNHSATHLLHAALREVLGPHVQQ 575
Query: 646 AGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAM 705
GSLV +RLRFDF+ P+ +L IER++N + +L++T++M+L+DAK +GA+A+
Sbjct: 576 KGSLVGPERLRFDFSHFEPVSREQLLTIERMVNREVRANHLVETRIMSLEDAKASGAMAL 635
Query: 706 FGEKYGEQVKI 716
FGEKY +QV++
Sbjct: 636 FGEKYADQVRV 646
>gi|386839014|ref|YP_006244072.1| alanyl-tRNA synthetase [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|374099315|gb|AEY88199.1| alanyl-tRNA synthetase [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|451792306|gb|AGF62355.1| alanyl-tRNA synthetase [Streptomyces hygroscopicus subsp.
jinggangensis TL01]
Length = 890
Score = 558 bits (1438), Expect = e-156, Method: Compositional matrix adjust.
Identities = 299/678 (44%), Positives = 424/678 (62%), Gaps = 33/678 (4%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQRC 112
IR+R+L F+ RGH V+PSASL+ +DPT+LL AGM+ FKP FLG+V PRA + Q+C
Sbjct: 6 IRRRWLSFFEERGHTVVPSASLIADDPTLLLVPAGMVPFKPYFLGEVKPPFPRATSVQKC 65
Query: 113 IRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE-----FGLPANRLW 167
+RT D+E VG+T+RH TFF+M GNFSFGDYFK+ AI+ AWE T +GL RLW
Sbjct: 66 VRTPDIEEVGKTTRHGTFFQMCGNFSFGDYFKEGAIKLAWELLTSPQDKGGYGLDPERLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCS 227
I+VY+DDDEA +IW++ VGVP E I+R+G DNFW+ G GPCGPCSEI YD P+ G
Sbjct: 126 ITVYQDDDEAEQIWHEVVGVPKERIQRLGMKDNFWSMGVPGPCGPCSEINYDRGPEFGVE 185
Query: 228 DVDLGDDTRFIEFYNLVFMQYNKKDDGS------LEPLKQKNIDTGLGLERIARILQKVP 281
+D R++E +NLVFMQY + + L L KNIDTGLGLER+A ILQ V
Sbjct: 186 GGPAVNDERYVEIWNLVFMQYERGEGTGKDNFEILGDLPSKNIDTGLGLERLAMILQGVQ 245
Query: 282 NNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRG 341
N YE D +IK+A+EL V Y +S+ ++++L+++ DH+R L+ DGV P N GRG
Sbjct: 246 NMYEIDTSMAVIKRATELTGVHYGESH-ASDVSLRVVTDHMRTATMLIGDGVTPGNEGRG 304
Query: 342 YVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEE 401
YV+RR++RRA+R RLLG G +L + + ++ EL T +RI +
Sbjct: 305 YVLRRIMRRAIRNMRLLGATGPVVKDLIDIVIRMMGQQYPELVTD--------RERIEKV 356
Query: 402 LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKE 461
EE F++TL+ G +LD A++ T+ GS L G AFLL+DT+GFP+++T E
Sbjct: 357 AVAEENAFLKTLKAGTNILDT----AVTETKAQGS-SVLPGDKAFLLHDTWGFPIDLTLE 411
Query: 462 VAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSA---DLAEKIPDTEFLGYDTL 518
+A E G+SVD +GF M+ QR +++A A K D ++A+ +T+F+GY
Sbjct: 412 MAAEQGLSVDEEGFRRLMKEQRERAKADAQAKKTGHADLGAYREIADAAGETDFIGYTDT 471
Query: 519 SAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAV 578
++ + +LVNG ++G +VEV+L+RTPFYAE GGQIGD G + V G AV
Sbjct: 472 EGESTIVGILVNGVSSPAATEGDEVEVVLDRTPFYAEGGGQIGDTGRIKVDSG-----AV 526
Query: 579 VEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKV 638
+EV+D +K + V+VHKG ++ G + VG + A +D + R H+ATHL AL+
Sbjct: 527 IEVRDCQKPVPGVYVHKGVVQVGEVTVGAKAHAAIDTRRRTAIARAHSATHLTHQALRDA 586
Query: 639 IGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAK 698
+G +QAGS R RFDF + + ++E+ IN + ++ +M +D+AK
Sbjct: 587 LGPTAAQAGSENQPGRFRFDFGSPSAVPTAVMTDVEQKINEVLARDLDVRADIMGIDEAK 646
Query: 699 RAGAIAMFGEKYGEQVKI 716
+ GAIA FGEKYGE+V++
Sbjct: 647 KQGAIAEFGEKYGERVRV 664
>gi|343509707|ref|ZP_08746970.1| alanyl-tRNA synthetase [Vibrio scophthalmi LMG 19158]
gi|342803889|gb|EGU39236.1| alanyl-tRNA synthetase [Vibrio scophthalmi LMG 19158]
Length = 860
Score = 558 bits (1438), Expect = e-156, Method: Compositional matrix adjust.
Identities = 307/687 (44%), Positives = 428/687 (62%), Gaps = 51/687 (7%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S D +R FL F+ S+GH+++ S+SLVP DPT+L T AGM QFK FLG R RA
Sbjct: 4 STDEVRNAFLKFFESKGHQIVESSSLVPHNDPTLLFTNAGMNQFKDCFLGLEKRAYTRAT 63
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
T+QRC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI +AWEF T LP
Sbjct: 64 TAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIAFAWEFLTETLQLPK 123
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG--------ADDNFWNSGATGPCGPCSE 215
+RL +++YE DDEAF+IWN++VG+P + I R+G DNFW G TGPCGPC+E
Sbjct: 124 DRLLVTIYETDDEAFDIWNQKVGIPADRIIRIGDKKGGKPFESDNFWQMGDTGPCGPCTE 183
Query: 216 IYYDFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLER 272
I+YD H D G D RFIE +N VFMQ+N++ DG++EPL + ++DTG+G+ER
Sbjct: 184 IFYD-HGDHIWGGRPGTPEEDGDRFIEIWNNVFMQFNRQADGTMEPLPKPSVDTGMGIER 242
Query: 273 IARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDG 332
I+ I+Q V +NYE D+ +IK +EL D +N +L++I DH+R+ +L+ DG
Sbjct: 243 ISAIMQGVHSNYEIDVFQALIKATAELIGCE-----DLSNQSLRVIADHIRSCSFLIVDG 297
Query: 333 VFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVK 392
V PSN GRGYV+RR+IRRAVR G +G +G L G + EL
Sbjct: 298 VMPSNEGRGYVLRRIIRRAVRHGNKIGAQGVFFHKLVGVLAEIMGTAGEELK-------- 349
Query: 393 AREQRILEELKR-EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDT 451
R+Q ++E++ R EE F +TLERG +L++ L D L GSV L G+ F LYDT
Sbjct: 350 -RQQALVEKVLRIEEENFGRTLERGMAILNEAL-DNL-----DGSV--LDGETVFKLYDT 400
Query: 452 FGFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTE 511
+GFP ++T +VA E ++D +GF+ ME QR Q A A + D +A + + +TE
Sbjct: 401 YGFPADLTNDVAREREFAIDEEGFEKAMEEQR---QRAREAGQFGTDYNAAIKTDV-ETE 456
Query: 512 FLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQG 571
F GY ++++ +L V G V +S G ++L TPFYAESGGQ GD G L G
Sbjct: 457 FSGYTGTEGESVIAALFVEGNEVDSLSAGDKAIIILEETPFYAESGGQSGDAGVLKTESG 516
Query: 572 TNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLL 631
+ V+D +K LG+ H G + EGV G + A+VD R ++H+ATHLL
Sbjct: 517 ------LFTVEDTQK-LGNAIAHHGVLAEGVFAKGDKAHAMVDAVRRTAITLNHSATHLL 569
Query: 632 QAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKV 691
AAL+KV+G+ +Q GSLV D LRFDF+ + EL+E+ER++N + + ++T V
Sbjct: 570 HAALRKVLGEHVTQKGSLVKADNLRFDFSHLEGVTAAELKEVERIVNAQVRRNHDIETNV 629
Query: 692 MALDDAKRAGAIAMFGEKYGEQVKISS 718
M ++ AK+ GA+A+FGEKY ++V++ S
Sbjct: 630 MDIESAKQKGAMALFGEKYDDEVRVLS 656
>gi|332535100|ref|ZP_08410911.1| alanyl-tRNA synthetase [Pseudoalteromonas haloplanktis ANT/505]
gi|332035475|gb|EGI71972.1| alanyl-tRNA synthetase [Pseudoalteromonas haloplanktis ANT/505]
Length = 866
Score = 558 bits (1438), Expect = e-156, Method: Compositional matrix adjust.
Identities = 303/673 (45%), Positives = 428/673 (63%), Gaps = 44/673 (6%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR++FLDF+AS+ H+++PS+SL+P D T+L AGM+QFK +FLG R RA +SQR
Sbjct: 9 IRQQFLDFFASKQHQIVPSSSLIPGNDATLLFNNAGMVQFKDVFLGAESRPYTRATSSQR 68
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI++AWEF T LP +L
Sbjct: 69 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAIKFAWEFLTEVVKLPQEKLL 128
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDF--HPDRG 225
+++Y DD+EAFE W+K++G+ + I R+ DNFW+ G TGPCGPCSEI+YD H G
Sbjct: 129 VTIYHDDEEAFEYWSKDIGLSEDRIIRIATSDNFWSMGDTGPCGPCSEIFYDHGEHIWGG 188
Query: 226 CSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYE 285
D RFIE +NLVFMQYN++ DG++ PL ++++DTG+GLERI+ ILQ V +NYE
Sbjct: 189 PPGTPEEDGDRFIEIWNLVFMQYNRQSDGTMLPLPKQSVDTGMGLERISAILQGVHSNYE 248
Query: 286 TDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVR 345
DL +I A+ + N + D + +L+++ DH+R+ +L+SDGV PSN GRGYV+R
Sbjct: 249 IDLFQGLIAAAASVTN-----AQDMDDKSLRVVADHIRSCAFLISDGVMPSNEGRGYVLR 303
Query: 346 RLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKR- 404
R+IRRAVR G LG +G L A + + + EL A++Q I+E++ R
Sbjct: 304 RIIRRAVRHGNKLGAQGSFFYKLVAALIEQMGQAYPEL---------AKQQEIIEKVLRI 354
Query: 405 EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAE 464
EE +F +TLERG +L++ L+D G + + G F LYDT+GFP ++T +VA
Sbjct: 355 EEEQFGKTLERGLAILEESLSDL------KGDI--IPGDLVFKLYDTYGFPADLTADVAR 406
Query: 465 EHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADL-AEKIPDTEFLGYDTLSAKAI 523
E +++D +GF+ M QR+ +Q A K D + L +EK+ TEF GYD+ A
Sbjct: 407 ERQMTIDHQGFEECMAVQRKTAQ---QAGKFGADYNEQLKSEKL--TEFKGYDSTHHSAT 461
Query: 524 VESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKD 583
V + G+ V + G V+L+RTPFYAESGGQ GD G + V G T +
Sbjct: 462 VVEIFAGGEAVQLLEDGQQGIVVLDRTPFYAESGGQTGDTGTITVAGGEFNVTNTTK--- 518
Query: 584 VKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQET 643
LG+ F H G + +G + V +V+A +D R K +HTATH+L AL++++G
Sbjct: 519 ----LGNAFAHHGIV-QGRIGVNDKVDATIDNARRDSIKKNHTATHILHEALRQLLGDHV 573
Query: 644 SQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAI 703
Q GSLV DRLRFDF+ + EL EIER++N I L T++MA+DDAK GA+
Sbjct: 574 GQKGSLVQPDRLRFDFSHFEAVTKDELREIERVVNDEIRRNFALNTELMAIDDAKAKGAM 633
Query: 704 AMFGEKYGEQVKI 716
A+FGEKY ++V++
Sbjct: 634 ALFGEKYDDEVRV 646
>gi|218294683|ref|ZP_03495537.1| alanyl-tRNA synthetase [Thermus aquaticus Y51MC23]
gi|218244591|gb|EED11115.1| alanyl-tRNA synthetase [Thermus aquaticus Y51MC23]
Length = 881
Score = 558 bits (1438), Expect = e-156, Method: Compositional matrix adjust.
Identities = 320/679 (47%), Positives = 430/679 (63%), Gaps = 46/679 (6%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVP----RQVPRAA 107
IR+++L F+ S+GH LPS SL+PE DP++L T AGM KP FLG P R+ R
Sbjct: 6 IREKYLSFFESKGHLRLPSFSLIPENDPSLLFTSAGMAPLKPYFLGAKPIFGGREWRRIT 65
Query: 108 TSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
T Q+C+R D+ENVGRT+RH+TFFEMLGNFSFGDYFKKEAI WAWEF T L RLW
Sbjct: 66 TCQKCLRVGDIENVGRTARHNTFFEMLGNFSFGDYFKKEAILWAWEFLTEHLKLDPERLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGA-----TGPCGPCSEIYYDFHP 222
++VYEDDDEA+ IW VGVP E I R G D+N+W GA GP GPCSEI+YD P
Sbjct: 126 VTVYEDDDEAYAIWRDLVGVPEERIGRFGEDENYWPGGAITHGPNGPSGPCSEIFYDRGP 185
Query: 223 DRGCSD---VDLGDDTRFIEFYNLVFMQYNKK----DDGSLEPLKQKNIDTGLGLERIAR 275
G D + G RF+E +NLVF QY+++ G L+PL QKNIDTG+GL R+A
Sbjct: 186 AFGTPDETGPNTGSGDRFVEIWNLVFTQYDRQGPIPGPGILKPLPQKNIDTGMGLYRVAA 245
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
ILQ V + Y TD +PII++ + L+ Y + +++ ++I DH+RA+V L+DGV
Sbjct: 246 ILQDVEDFYRTDTFYPIIERVALLSGRPYL---GKESVSHRVIADHVRAVVAALADGVTF 302
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN GRGYV+RRL+RRA+R G LLG L FL +A EL +++
Sbjct: 303 SNTGRGYVIRRLLRRALRHGYLLG--------LAEPFLHRLAPVVAELLGDFYPEMRENL 354
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
Q + ++++ EE RF++TLE G + LD +L+ + G V L GQ+AF LYDT+GFP
Sbjct: 355 QAVEKQIRLEEERFLETLEGGLRRLDALLSGL-----KPGEV--LPGQEAFRLYDTYGFP 407
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKI----PDTE 511
+++T E+A E G VD +GF ME Q+ +S+AA + SA + E++ TE
Sbjct: 408 LDLTVEIAAERGYGVDTEGFKRAMEEQQERSRAAMAFEREIFKRSAQVLEELYAERGATE 467
Query: 512 FLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQG 571
FLGY TL A+A V +LL + + + G++V+V+L+RTPFYAE GGQIGD+G L G
Sbjct: 468 FLGYGTLEAEAQVLALLAGDESLPEAGPGTEVQVVLDRTPFYAEGGGQIGDFGLLEWPGG 527
Query: 572 TNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLL 631
+ V+ K+ +F+H+ + EGVL VG V A+VDP+ R+ + +HTATHLL
Sbjct: 528 RAR------VETTLKTERGIFLHRARVEEGVLGVGERVRAVVDPR-RRDTERNHTATHLL 580
Query: 632 QAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKV 691
AAL+ V+G QAGSLVA DRLRFDF PL ELE IE L+N WI + +
Sbjct: 581 HAALRAVLGPHVRQAGSLVAPDRLRFDFTHPEPLKGEELERIELLVNRWIMADFPVTWRY 640
Query: 692 MALDDAKRAGAIAMFGEKY 710
+ L++AK+ GA+A+FGEKY
Sbjct: 641 LPLEEAKKEGAMALFGEKY 659
>gi|269798241|ref|YP_003312141.1| alanyl-tRNA synthetase [Veillonella parvula DSM 2008]
gi|269094870|gb|ACZ24861.1| alanyl-tRNA synthetase [Veillonella parvula DSM 2008]
Length = 871
Score = 558 bits (1438), Expect = e-156, Method: Compositional matrix adjust.
Identities = 307/676 (45%), Positives = 427/676 (63%), Gaps = 40/676 (5%)
Query: 50 GDSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
G+ +R+ +L F+ S+GH L S SL+PE DP++LL AGM KP F GK+ R T
Sbjct: 3 GNELRQAYLQFFESKGHLKLDSFSLIPENDPSLLLIGAGMAPLKPFFTGKLVPPCRRITT 62
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
Q+ +RT D+ENVGRT+RHHTFFEMLGNFSFGDYFKKEAI WAWEF T L NRL++
Sbjct: 63 CQKSMRTGDLENVGRTARHHTFFEMLGNFSFGDYFKKEAIHWAWEFLTEVIKLDKNRLYV 122
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
+VY DD EA++ W+ + GV HI R+ +DNFW G GPCGP SEI++D P+ GC D
Sbjct: 123 TVYPDDQEAYDTWHNDCGVEESHITRL--EDNFWEIG-EGPCGPDSEIFFDQGPEHGCDD 179
Query: 229 VDLG---DDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYE 285
+ D R++E +NLVF Q+NK DGS EPL+ KNIDTG GLER+A +LQ N+E
Sbjct: 180 PNCAPGCDCDRYLEIWNLVFTQFNKMPDGSYEPLQHKNIDTGAGLERLASVLQGCKTNFE 239
Query: 286 TDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVR 345
TDLIFPII+ ++ A V+Y + + T+++LK+I DH RA+ L+SDGV PSN GRGYV+R
Sbjct: 240 TDLIFPIIEATAKRAGVTYNE-DPNTDVSLKVIADHARAVTALISDGVLPSNEGRGYVLR 298
Query: 346 RLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKRE 405
R++RRAVR GRLLGI EG FL + + +++ + + ++ + ++ E
Sbjct: 299 RILRRAVRHGRLLGI--------EGIFLTPLIDVVVDILGPGITSIAEKQDFVKRVVQNE 350
Query: 406 ELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEE 465
E RF QTLE+G +LL+ ++ D L+ + + VP G + F LYDT+GFP E+T+E+A E
Sbjct: 351 EERFNQTLEQGLELLNSLI-DTLAAEKAT-VVP---GSEVFKLYDTYGFPWELTEEIASE 405
Query: 466 HGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTL--SAKAI 523
G ++D +GF+ M+ QR +++ A V + A +A PD FL + L
Sbjct: 406 RGFTIDHEGFEAAMKEQRERAREAR------VKEDAKVA--TPDITFLKDEELVEDEAET 457
Query: 524 VESLLVNGKPVIKV---SKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVE 580
S+L+ GK ++ + G ++ V++ TPF+AE GGQ+GD GF+ G VE
Sbjct: 458 ASSVLMLGKGSERLQTAADGDEITVIVRTTPFHAEGGGQLGDTGFIVGPMGK------VE 511
Query: 581 VKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIG 640
V + K+ H GT+ EG + G +V VD R +HTATHLL AALKKV+G
Sbjct: 512 VHNTKRLPEGTVYHIGTVIEGSISEGDDVTLEVDTNRRAAMARNHTATHLLHAALKKVLG 571
Query: 641 QETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRA 700
+ +QAGSLV D LRFDF P+ EL++IE L+N I A L M++D+AK
Sbjct: 572 EHVNQAGSLVTPDYLRFDFTHFSPVTQEELDQIEVLVNEEILKATDLAIAEMSMDEAKAK 631
Query: 701 GAIAMFGEKYGEQVKI 716
GA+A+FG+KYG+ V++
Sbjct: 632 GAMALFGDKYGDVVRV 647
>gi|91784488|ref|YP_559694.1| alanyl-tRNA synthetase [Burkholderia xenovorans LB400]
gi|122970272|sp|Q13W97.1|SYA_BURXL RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|91688442|gb|ABE31642.1| alanyl-tRNA synthetase [Burkholderia xenovorans LB400]
Length = 874
Score = 558 bits (1438), Expect = e-156, Method: Compositional matrix adjust.
Identities = 305/681 (44%), Positives = 419/681 (61%), Gaps = 48/681 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR++FL F+ S+GH ++ S+SLVP DPT+L T +GM+QFK +FLG R RA T+QR
Sbjct: 6 IREKFLKFFESKGHTIVRSSSLVPGNDPTLLFTNSGMVQFKDVFLGAESRPYSRATTAQR 65
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI +AWE T + LP ++LW
Sbjct: 66 SVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAIHYAWELLTGVYQLPKDKLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYYDF 220
++VY +DDEA +IW KEVGVPVE I R+G A DNFW TGPCGPCSEI+YD
Sbjct: 126 VTVYHEDDEAHDIWAKEVGVPVERIIRIGDNKGARYASDNFWQMADTGPCGPCSEIFYDH 185
Query: 221 HPD--RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQ 278
PD G D R+IE +NLVFMQ+N+ G++ PL ++ +DTG+GLERIA +LQ
Sbjct: 186 GPDVWGGPPGSPEEDGDRYIEIWNLVFMQFNRDAQGNMTPLPKQCVDTGMGLERIAAVLQ 245
Query: 279 KVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNI 338
V +NYE DL +IK A+ VS D TN +LK+I DH+RA +L+ DGV P N
Sbjct: 246 HVHSNYEIDLFQALIKAAARETGVS-----DLTNNSLKVIADHIRACSFLIVDGVIPGNE 300
Query: 339 GRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRI 398
GRGYV+RR++RRA+R G LG K G+F + + ++K EQR+
Sbjct: 301 GRGYVLRRIVRRAIRHGYKLGKK--------GSFFHRMVADLVAQMGAAYPELKEAEQRV 352
Query: 399 LEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEI 458
+ L++EE RF +T+E G +L+ LA+ E+GS L G+ AF L+DT+GFP+++
Sbjct: 353 TDVLRQEEERFFETIEHGMSILEGALAEL-----EAGSSKTLDGELAFKLHDTYGFPLDL 407
Query: 459 TKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTL 518
T +V E V+VD FD M QR Q++AA K+ + L T F GYD +
Sbjct: 408 TADVCREREVTVDEAAFDEAMTRQREQARAA-GKFKM----AQGLEYSGEKTTFHGYDEV 462
Query: 519 ---SAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
AK I +L V G V + S+G V+L+ TPFYAESGGQ+GD G L
Sbjct: 463 VFDDAKVI--ALYVEGASVQQASQGQQAVVVLDHTPFYAESGGQVGDQGVL------ANA 514
Query: 576 TAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAAL 635
+ V D K V H GT+ +G L+VG V+A +D R R +H+ATHL+ AL
Sbjct: 515 SVRFAVSDTLKVQADVVGHHGTLEQGTLKVGDVVKAEIDAVRRARTARNHSATHLMHKAL 574
Query: 636 KKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALD 695
++V+G Q GSLV D+ RFDF + PL D ++ +E ++N + +VM+ D
Sbjct: 575 REVLGTHVQQKGSLVDADKTRFDFAHNAPLTDEQIRRVEEIVNAEVLANAPGIVRVMSFD 634
Query: 696 DAKRAGAIAMFGEKYGEQVKI 716
+A + GA+A+FGEKYG++V++
Sbjct: 635 EAVKGGAMALFGEKYGDEVRV 655
>gi|385208723|ref|ZP_10035591.1| alanine--tRNA ligase [Burkholderia sp. Ch1-1]
gi|385181061|gb|EIF30337.1| alanine--tRNA ligase [Burkholderia sp. Ch1-1]
Length = 874
Score = 558 bits (1438), Expect = e-156, Method: Compositional matrix adjust.
Identities = 305/681 (44%), Positives = 419/681 (61%), Gaps = 48/681 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR++FL F+ S+GH ++ S+SLVP DPT+L T +GM+QFK +FLG R RA T+QR
Sbjct: 6 IREKFLKFFESKGHTIVRSSSLVPGNDPTLLFTNSGMVQFKDVFLGAESRPYSRATTAQR 65
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI +AWE T + LP ++LW
Sbjct: 66 SVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAIHYAWELLTGVYQLPKDKLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYYDF 220
++VY +DDEA +IW KEVGVPVE I R+G A DNFW TGPCGPCSEI+YD
Sbjct: 126 VTVYHEDDEAHDIWAKEVGVPVERIIRIGDNKGARYASDNFWQMADTGPCGPCSEIFYDH 185
Query: 221 HPD--RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQ 278
PD G D R+IE +NLVFMQ+N+ G++ PL ++ +DTG+GLERIA +LQ
Sbjct: 186 GPDVWGGPPGSPEEDGDRYIEIWNLVFMQFNRDAQGNMTPLPKQCVDTGMGLERIAAVLQ 245
Query: 279 KVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNI 338
V +NYE DL +IK A+ VS D TN +LK+I DH+RA +L+ DGV P N
Sbjct: 246 HVHSNYEIDLFQALIKAAARETGVS-----DLTNNSLKVIADHIRACSFLIVDGVIPGNE 300
Query: 339 GRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRI 398
GRGYV+RR++RRA+R G LG K G+F + + ++K EQR+
Sbjct: 301 GRGYVLRRIVRRAIRHGYKLGKK--------GSFFHRMVADLVAQMGAAYPELKDAEQRV 352
Query: 399 LEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEI 458
+ L++EE RF +T+E G +L+ LA+ E+GS L G+ AF L+DT+GFP+++
Sbjct: 353 TDVLRQEEERFFETIEHGMSILEGALAEL-----EAGSSKTLDGELAFKLHDTYGFPLDL 407
Query: 459 TKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTL 518
T +V E V+VD FD M QR Q++AA K+ + L T F GYD +
Sbjct: 408 TADVCREREVTVDEAAFDEAMTRQREQARAA-GKFKM----AQGLEYSGEKTTFHGYDEI 462
Query: 519 ---SAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
AK I +L V G V + S+G V+L+ TPFYAESGGQ+GD G L
Sbjct: 463 VFDDAKVI--ALYVEGASVQQASQGQQAVVVLDHTPFYAESGGQVGDQGVL------ANA 514
Query: 576 TAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAAL 635
+ V D K V H GT+ +G L+VG V+A +D R R +H+ATHL+ AL
Sbjct: 515 SVRFAVSDTLKVQADVVGHHGTLEQGTLKVGDVVKAEIDAVRRARTARNHSATHLMHKAL 574
Query: 636 KKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALD 695
++V+G Q GSLV D+ RFDF + PL D ++ +E ++N + +VM+ D
Sbjct: 575 REVLGTHVQQKGSLVDADKTRFDFAHNAPLTDEQIRRVEEIVNAEVLANAPGIVRVMSFD 634
Query: 696 DAKRAGAIAMFGEKYGEQVKI 716
+A + GA+A+FGEKYG++V++
Sbjct: 635 EAVKGGAMALFGEKYGDEVRV 655
>gi|317493956|ref|ZP_07952373.1| alanyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316918283|gb|EFV39625.1| alanyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 875
Score = 558 bits (1438), Expect = e-156, Method: Compositional matrix adjust.
Identities = 313/692 (45%), Positives = 437/692 (63%), Gaps = 68/692 (9%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDFY S+GH+++ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFYHSKGHQIVESSSLVPNNDPTLLFTNAGMNQFKDVFLGIDKRSYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP +
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWFNLPKEK 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEAF IW EVGVP E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYETDDEAFNIWADEVGVPRERIIRIGDNKGAPFASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR------GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLER 272
D H D G ++ D GD R+IE +N+VFMQ+N++ DG++ PL + ++DTG+GLER
Sbjct: 188 D-HGDHIWGGPPGSAEED-GD--RYIEIWNIVFMQFNRQSDGTMLPLPKPSVDTGMGLER 243
Query: 273 IARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDG 332
IA +LQ V +NY+ DL +I +++ + D ++ +L++I DH+R+ +L+SDG
Sbjct: 244 IAAVLQHVNSNYDIDLFRTLIAATAKVTGAT-----DLSSKSLRVIADHIRSCAFLVSDG 298
Query: 333 VFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVK 392
V PSN GRGYV+RR+IRRAVR G ++G K F + IE+ ++K
Sbjct: 299 VLPSNEGRGYVLRRIIRRAVRHGNMVGAKE--------TFFYKLVAPLIEVMGPAADELK 350
Query: 393 AREQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTF 452
++ + + LK EE +F +TLERG LLD D LS+ S L G+ AF LYDT+
Sbjct: 351 RQQSMVEQVLKTEEEQFARTLERGLALLD----DELSKL----SGDTLDGETAFRLYDTY 402
Query: 453 GFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQ------AAHNAVKLSVDDSADLAEK 506
GFP+++T +V E + VD GF+ ME QRR+++ A +N++ + VD +
Sbjct: 403 GFPLDLTADVCRERNLKVDEIGFERAMEEQRRRARESSGFGADYNSM-IRVDGA------ 455
Query: 507 IPDTEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFL 566
++F GYD + V +L +G+ V ++ G + V+LN TPFYAESGGQ+GD G L
Sbjct: 456 ---SKFSGYDHNQQHSSVTALFRDGQAVDVLNAGEEGVVVLNETPFYAESGGQVGDKGEL 512
Query: 567 YVTQGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHT 626
T Q + V V D +K G H+G + +G ++VG VEA +D R R +++H+
Sbjct: 513 -----TAQGVSFV-VTDTQK-YGQAIGHQGKVAQGSVKVGDSVEATIDEARRSRIRLNHS 565
Query: 627 ATHLLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANL 686
ATHLL AAL++V+G SQ GSLV+ LRFDF+ + ++ ++E ++N I
Sbjct: 566 ATHLLHAALRQVLGDHVSQKGSLVSDRNLRFDFSHFEAMKPEQIRQVEDIVNAQIRRNLP 625
Query: 687 LQTKVMALDDAKRAGAIAMFGEKYGEQVKISS 718
++T +M L+DAK GA+A+FGEKY E V++ S
Sbjct: 626 IETNIMDLEDAKAKGAMALFGEKYDESVRVLS 657
>gi|421748468|ref|ZP_16186061.1| alanyl-tRNA ligase [Cupriavidus necator HPC(L)]
gi|409772805|gb|EKN54732.1| alanyl-tRNA ligase [Cupriavidus necator HPC(L)]
Length = 874
Score = 558 bits (1438), Expect = e-156, Method: Compositional matrix adjust.
Identities = 312/684 (45%), Positives = 422/684 (61%), Gaps = 50/684 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR +FL F+ S+GH V+ S+SLVP DPT+L T +GM+QFK +FLG R RA +SQR
Sbjct: 6 IRSKFLQFFESKGHTVVRSSSLVPANDPTLLFTNSGMVQFKDVFLGTDKRPYSRATSSQR 65
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK+EAIQ+AWE T + LPA +LW
Sbjct: 66 SVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKREAIQYAWELLTKVYNLPAEKLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYYDF 220
++VY +DDEA++IW KEVGVPVE I R+G A DNFW TGPCGPCSEI+YD
Sbjct: 126 VTVYAEDDEAYDIWAKEVGVPVERIVRIGDNKGARYASDNFWQMADTGPCGPCSEIFYDH 185
Query: 221 HPD-----RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
PD G ++ D GD R+IE +NLVFMQ+N+ + G++ PL + +DTG+GLERIA
Sbjct: 186 GPDVWGGPPGSAEED-GD--RYIEIWNLVFMQFNRDEQGNMTPLPKPCVDTGMGLERIAA 242
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NYE DL +I+ A+ V +D N +LK+I DH+RA +L+ DGV P
Sbjct: 243 VLQHVHSNYEIDLFQALIRAAARETGV-----DDLNNNSLKVIADHIRACSFLIVDGVIP 297
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
N GRGYV+RR++RRA+R G LG K L + + E EL+ E
Sbjct: 298 GNEGRGYVLRRIVRRAIRHGYKLGRKTPFFHKLVADLVAQMGEAYPELAE--------AE 349
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
R++E LK EE RF +T+E G +LD LAD ++ G++ L G+ AF L+DT+GFP
Sbjct: 350 PRVVEVLKAEEERFFETIENGMSILDAALADLKAK---GGNM--LDGELAFKLHDTYGFP 404
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGY 515
+++T++V E V+VD FD M QR Q++AA K+ +A L T F GY
Sbjct: 405 LDLTQDVCREQQVAVDETAFDAAMTRQREQARAA-GKFKM----AAGLEYSGAKTTFHGY 459
Query: 516 DTLSAK-AIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQ 574
+ L A V +L V+G V + G V+L+ TPFYAESGGQ GD G +
Sbjct: 460 EKLVLNDAKVVALYVDGASVDTMQPGQTGVVVLDHTPFYAESGGQAGDQGEI------KA 513
Query: 575 QTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAA 634
AV V D K VF H+GT+ L+VG V A VD R R +H+ATHL+ A
Sbjct: 514 GAAVFAVADTTKVQADVFGHQGTLAGAALKVGDTVTAEVDALRRARTMRNHSATHLMHKA 573
Query: 635 LKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMAL 694
L++V+G Q GSLV D+ RFDF+ + PL ++ E+E ++N I ++M
Sbjct: 574 LREVLGSHVQQKGSLVDADKTRFDFSHNAPLTAAQIREVEEIVNAEILRNEATGAELMPF 633
Query: 695 DDAKRAGAIAMFGEKYGEQVKISS 718
DDA ++GA+A+FGEKY ++V++ S
Sbjct: 634 DDAVKSGAMALFGEKYADEVRVLS 657
>gi|75675479|ref|YP_317900.1| alanyl-tRNA synthetase [Nitrobacter winogradskyi Nb-255]
gi|123613615|sp|Q3ST43.1|SYA_NITWN RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|74420349|gb|ABA04548.1| alanyl-tRNA synthetase [Nitrobacter winogradskyi Nb-255]
Length = 891
Score = 558 bits (1437), Expect = e-156, Method: Compositional matrix adjust.
Identities = 302/679 (44%), Positives = 426/679 (62%), Gaps = 37/679 (5%)
Query: 51 DSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATS 109
+ IR FL+++A+ GH+++PS+ LVP DPT++ T AGM+QFK +F G R RA TS
Sbjct: 5 NDIRSAFLNYFAANGHQIVPSSPLVPRNDPTLMFTNAGMVQFKNVFTGVEKRPYQRATTS 64
Query: 110 QRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANR 165
Q+C+R ND++NVG T+RHHTFFEMLGNFSFGDYFK AI+ AW+ T EFGLP +R
Sbjct: 65 QKCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKDRAIELAWKLVTQEFGLPKDR 124
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDR- 224
L +VY DDD AF++W K G+P I R+ DNFW G TGPCGPCSEI+YD H DR
Sbjct: 125 LTATVYIDDDGAFDLWKKIAGLPESRIIRIAGSDNFWQMGDTGPCGPCSEIFYD-HGDRI 183
Query: 225 --GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPN 282
G D RF+E +NLVFMQY K DGS L + +IDTG GLER+A +LQ +
Sbjct: 184 PGGPPGSPEQDGDRFVEIWNLVFMQYEKLPDGSRPNLPKPSIDTGAGLERVAAVLQGKHD 243
Query: 283 NYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGY 342
NY+ DL +I+ A++L A +L++I DHLRA +L++DGV PSN GRGY
Sbjct: 244 NYDIDLFVALIRAAADLTG---ADPQGPMKASLRVIADHLRASSFLIADGVLPSNEGRGY 300
Query: 343 VVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEE- 401
V+RR++RRA+R +LLG + L G + + E EL R + ++EE
Sbjct: 301 VLRRIMRRAMRHAQLLGAREPLMWRLVGVLVREMGEAFPELQ---------RARPLIEET 351
Query: 402 LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKE 461
L+ EE RF +TLERG +LD+ S + + G + G+ AF LYDT+GFP+++T++
Sbjct: 352 LRLEETRFRKTLERGLSILDEK-----SASLKQGDM--FDGETAFTLYDTYGFPLDLTQD 404
Query: 462 VAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSA--DLAEKIPDTEFLGYDTLS 519
G+ VD+ F ME Q+ +++A+ + + +S L EK+ TEFLGY+T +
Sbjct: 405 ALRARGIGVDLASFTDAMEQQKAKARASWSGSGEAAAESIWFPLREKLGATEFLGYETEA 464
Query: 520 AKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVV 579
A+ +V +L+ +G+ + G ++LN+TPFY ESGGQ+GD GFL + G
Sbjct: 465 AEGVVAALVKDGEEADTLKAGESGAIVLNQTPFYGESGGQVGDTGFL-IADGVR-----F 518
Query: 580 EVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVI 639
V D +K G +FVH GT+ +GVL G + VD R + +H+ATHLL AL++V+
Sbjct: 519 RVTDTQKKAGDLFVHLGTVEQGVLAPGMALALEVDHDRRSAIRANHSATHLLHEALRQVL 578
Query: 640 GQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKR 699
G +Q GSLVA +RLRFDF ++P+ EL IE + N + + + T++MA+DDA+
Sbjct: 579 GDHIAQRGSLVAPERLRFDFAHNKPISADELRCIEDIANDVVLENGEVTTRLMAVDDARE 638
Query: 700 AGAIAMFGEKYGEQVKISS 718
AGA A+FGEKYG++V++ S
Sbjct: 639 AGARALFGEKYGDEVRVVS 657
>gi|254303692|ref|ZP_04971050.1| alanine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
ATCC 10953]
gi|148323884|gb|EDK89134.1| alanine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
ATCC 10953]
Length = 867
Score = 558 bits (1437), Expect = e-156, Method: Compositional matrix adjust.
Identities = 289/674 (42%), Positives = 431/674 (63%), Gaps = 35/674 (5%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
+G+ IR++F++F+ + HK SASL+P+DPT+LLT+AGM+ FKP FLG+ PR T
Sbjct: 3 TGNEIREKFIEFFMQKQHKHFESASLIPDDPTLLLTVAGMVPFKPYFLGQKEAPCPRVTT 62
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
Q+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFKKEAI+W+WEF T L ++LW+
Sbjct: 63 YQKCIRTNDLENVGRTARHHTFFEMLGNFSFGDYFKKEAIKWSWEFVTEVLKLDKDKLWV 122
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYD----FHPDR 224
+V+ DDEA IW +E P E I RMG +N+W++G TG CGPCSEI+ D + D
Sbjct: 123 TVFTTDDEAERIWIEECNFPKERIVRMGESENWWSAGPTGSCGPCSEIHVDLGVQYGGDE 182
Query: 225 GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNY 284
D G D RFIE +NLVF ++N+ +DGSLEPL +KNIDTG GLERIA ++Q NN+
Sbjct: 183 NSKIGDEGTDNRFIEIWNLVFTEWNRMEDGSLEPLPKKNIDTGAGLERIAAVVQGKANNF 242
Query: 285 ETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVV 344
ETDL+FPI+++A+++ Y + N + +LK+I DH RA+ +L++DGV PSN GRGY++
Sbjct: 243 ETDLLFPILEEAAKITGSQYGK-NPEIDFSLKVITDHARAVTFLVNDGVIPSNEGRGYIL 301
Query: 345 RRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKR 404
RR++RRAVR GRLLG F+ + +K +E D++ + I + +K
Sbjct: 302 RRILRRAVRHGRLLGYT--------DLFMYKMVDKVVEKFEVAYPDLRKNLENIRKIVKI 353
Query: 405 EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAE 464
EE +F TL++G +L++Q + + L+ + +L G+ +F LYDT+GFP E+T+E+AE
Sbjct: 354 EEEKFSNTLDQGIQLVNQEIDNLLANGKN-----KLDGEISFKLYDTYGFPYELTEEIAE 408
Query: 465 EHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDS--ADLAEKIPDTEFLGYDTLSAKA 522
E GV+V + F+ +ME Q+ ++++A V DS + +K T+F GY+ + +
Sbjct: 409 ERGVTVLREEFEAKMEEQKEKARSAREVVMEKGQDSFIEEFYDKYGITKFTGYEKIEDEG 468
Query: 523 IVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVK 582
+ S I+ +K ++ ++TPFYAESGGQ+GD G +Y + +V
Sbjct: 469 KLLS--------IREAKDGKYLLIFDKTPFYAESGGQVGDQGKIY------SDSFEAKVL 514
Query: 583 DVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQE 642
DV+K +F+H +G+ E + + VD R +HTATHLL AL++V+G
Sbjct: 515 DVQKQ-KDIFIHTVEFEKGIAEENKTYKLEVDIVKRLDTAKNHTATHLLHKALREVVGTH 573
Query: 643 TSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGA 702
QAGSLV ++LRFDF+ + L +L +IE ++N I + + +++AK+ GA
Sbjct: 574 VQQAGSLVDSEKLRFDFSHYEALTAEQLSKIEDIVNEKIREGIEVAVSHHTIEEAKKLGA 633
Query: 703 IAMFGEKYGEQVKI 716
+ +FG+KYG+ V++
Sbjct: 634 MMLFGDKYGDVVRV 647
>gi|442804852|ref|YP_007373001.1| alanine--tRNA ligase AlaS [Clostridium stercorarium subsp.
stercorarium DSM 8532]
gi|442740702|gb|AGC68391.1| alanine--tRNA ligase AlaS [Clostridium stercorarium subsp.
stercorarium DSM 8532]
Length = 879
Score = 557 bits (1436), Expect = e-156, Method: Compositional matrix adjust.
Identities = 316/678 (46%), Positives = 436/678 (64%), Gaps = 35/678 (5%)
Query: 51 DSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATS 109
+ +R+++L F+ S+GH LPS SLVPE DP+VLL AGM KP F G+ R T
Sbjct: 7 NELREKYLSFFESKGHLRLPSFSLVPENDPSVLLINAGMTPLKPYFTGQKIPPSRRVTTC 66
Query: 110 QRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWIS 169
Q+CIRT D++NVG+TSRH TFFEMLGNFSFGDYFKKEAI WAWEF T G+P RL++S
Sbjct: 67 QKCIRTPDIDNVGKTSRHATFFEMLGNFSFGDYFKKEAITWAWEFFTEVLGIPEERLYVS 126
Query: 170 VYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD- 228
VY +DDEAF+IWNK VG+P E I RMG +DNFW G TGPCGPCSEIY+D D+GC
Sbjct: 127 VYFEDDEAFDIWNKVVGLPKEKIFRMGKEDNFWEHG-TGPCGPCSEIYFDRGKDKGCGKE 185
Query: 229 -VDLGDDT-RFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYET 286
+G D RFIE +NLVF Q+++++DG+ PLKQKNIDTG+GLER+A ++Q V N +E
Sbjct: 186 TCTVGCDCDRFIEVWNLVFSQFDRQEDGTYLPLKQKNIDTGMGLERLACVVQGVDNIFEV 245
Query: 287 DLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRR 346
D + ++ +A V Y + + + ++++++I DH+R L+SDGV PSN GRGYV+RR
Sbjct: 246 DTVRTVLDHVCRIAGVRYGE-DYKKDVSIRVITDHIRGSSMLVSDGVLPSNEGRGYVLRR 304
Query: 347 LIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREE 406
LIRRA R GRLLGIK AFL +AE I +S + + I + + EE
Sbjct: 305 LIRRAARHGRLLGIK--------DAFLSELAETVINVSMGAYPHMDEKRDYIKKVISIEE 356
Query: 407 LRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEH 466
+F T+++G +L++ + D L R GS +SG F L+DT+GFPV++T+E+A+EH
Sbjct: 357 EKFYNTIDQGMNILEEYV-DELKR---QGS-DTISGSMVFKLHDTYGFPVDLTREIAQEH 411
Query: 467 GVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSA---DL---AEKIPDTEFLGYDTLSA 520
+ +D GF EM Q+ +++ A +L ++SA DL K TEF GY+
Sbjct: 412 SMKIDENGFHEEMRKQKEKAREA----RLKKENSAWEKDLFSGGYKSVVTEFTGYNEYET 467
Query: 521 KAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVE 580
+A V ++++GK V +V V+L+RTPFYAESGGQ+GD G V G N + +
Sbjct: 468 EATVRFIVLDGKLVENAQMDDEVAVVLDRTPFYAESGGQVGDTG---VITGDNFK---MT 521
Query: 581 VKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIG 640
V D KK+ ++H G I G+++V V A VD + R+ +HT TH+L ALKK++G
Sbjct: 522 VNDCKKTSDGKYLHYGKIESGMVQVNDRVIAKVDIERRKCTARNHTTTHILHRALKKILG 581
Query: 641 QETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRA 700
QAGSLVA DRLRFDF PL + ++E +E +N I + + M L++AK+A
Sbjct: 582 DHVHQAGSLVAPDRLRFDFTHFSPLTEEQIEAVESEVNSVILSNYPVTVREMPLEEAKKA 641
Query: 701 GAIAMFGEKYGEQVKISS 718
GA A+FGEKYG+ V++ S
Sbjct: 642 GATALFGEKYGDIVRVVS 659
>gi|170701933|ref|ZP_02892858.1| alanyl-tRNA synthetase [Burkholderia ambifaria IOP40-10]
gi|170133166|gb|EDT01569.1| alanyl-tRNA synthetase [Burkholderia ambifaria IOP40-10]
Length = 874
Score = 557 bits (1436), Expect = e-156, Method: Compositional matrix adjust.
Identities = 301/679 (44%), Positives = 426/679 (62%), Gaps = 44/679 (6%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR++FL F+ S+GH ++ S+SLVP DPT++ T +GM+QFK +FLG PR RA T+QR
Sbjct: 6 IREKFLKFFESKGHTIVRSSSLVPGNDPTLMFTNSGMVQFKDVFLGTDPRPYSRATTAQR 65
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AI++AWE T + LP ++LW
Sbjct: 66 SVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIRFAWELLTTVYQLPKDKLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYYDF 220
++VY++DDEA++IW KEVGVP E I R+G A DNFW G TGPCGPC+EI+YD
Sbjct: 126 VTVYQEDDEAYDIWAKEVGVPTERIIRIGDNKGARYASDNFWTMGDTGPCGPCTEIFYDH 185
Query: 221 HPD--RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQ 278
PD G D R+IE +NLVFMQ+N+ G++ L ++++DTG+GLER+A +LQ
Sbjct: 186 GPDVWGGPPGSPEEDGDRYIEIWNLVFMQFNRDAQGNMTRLPKQSVDTGMGLERLAAVLQ 245
Query: 279 KVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNI 338
V +NYE DL +IK A+ + +S D TN +LK+I DH+RA +L+ DGV P N
Sbjct: 246 HVHSNYEIDLFQNLIKAAARVTEIS-----DLTNNSLKVIADHIRACSFLIVDGVIPGNE 300
Query: 339 GRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRI 398
GRGYV+RR++RRA+R G LG KG F +A+ E+ ++K EQR+
Sbjct: 301 GRGYVLRRIVRRAIRHGYKLGRKGS-------FFHKLVADLVAEMGGAY-PELKEAEQRV 352
Query: 399 LEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEI 458
+ L++EE RF +T+E G +L+ LAD ++ G V L G+ AF L+DT+GFP+++
Sbjct: 353 TDVLRQEEERFFETIEHGMSILEAALADVEAK---GGKV--LDGELAFKLHDTYGFPLDL 407
Query: 459 TKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTL 518
T +V E G++VD FD M QR Q++AA + L T F GY+ +
Sbjct: 408 TADVCRERGMTVDEPAFDDAMARQREQARAAGK-----FKATQGLEYTGAKTTFHGYEEI 462
Query: 519 S-AKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTA 577
+ A V +L V+G V +V G D V+L+ TPFYAESGGQ+GD G L N T
Sbjct: 463 AFDDAKVVALYVDGSAVNEVKAGQDAVVVLDHTPFYAESGGQVGDQGLL-----ANASTR 517
Query: 578 VVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKK 637
V D K V H GT+ +G L++G + A +D R R + +H+ATHL+ AL++
Sbjct: 518 FA-VADTLKVQADVVGHHGTLEQGTLKIGDVMRAEIDAHRRARTQRNHSATHLMHKALRE 576
Query: 638 VIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDA 697
V+G Q GSLV ++ RFDF + P+ D E+ +E+++N I +VM D+A
Sbjct: 577 VLGAHVQQKGSLVDAEKTRFDFAHNAPMTDDEIRRVEQIVNNEILANAPGIVRVMPYDEA 636
Query: 698 KRAGAIAMFGEKYGEQVKI 716
+ GA+A+FGEKYG++V++
Sbjct: 637 VKGGAMALFGEKYGDEVRV 655
>gi|117923331|ref|YP_863948.1| alanyl-tRNA synthetase [Magnetococcus marinus MC-1]
gi|205830136|sp|A0L3J9.1|SYA_MAGSM RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|117607087|gb|ABK42542.1| alanyl-tRNA synthetase [Magnetococcus marinus MC-1]
Length = 878
Score = 557 bits (1436), Expect = e-156, Method: Compositional matrix adjust.
Identities = 296/680 (43%), Positives = 426/680 (62%), Gaps = 35/680 (5%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
+G+ IRKRF+ F+ GH + S+SLVP DPT+L T AGM+QFK +FLG+ R RA
Sbjct: 2 NGNEIRKRFVAFFQQHGHTHVESSSLVPRNDPTLLFTNAGMVQFKSLFLGEERRDYSRAV 61
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
++Q+C+R ND+ENVGRT+RHHTFFEMLGNFSFGDYFK+EAI+ W F T + G+ A
Sbjct: 62 SAQKCVRAGGKHNDLENVGRTARHHTFFEMLGNFSFGDYFKEEAIRLGWRFVTEDLGIDA 121
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPD 223
RL ++VY +DDEA+ IW +++G+P + + R+ DNFW+ G TGPCGPCSEI+YD+
Sbjct: 122 QRLLVTVYSEDDEAYAIWTQQIGLPADKVIRIPTTDNFWSMGDTGPCGPCSEIFYDYGDT 181
Query: 224 -----RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQ 278
G D D GD RF+E +NLVFMQY++ DG+L PL + +IDTG GLER+A +LQ
Sbjct: 182 VAGGPPGSEDED-GD--RFVEIWNLVFMQYDRSSDGTLTPLPKPSIDTGAGLERLASVLQ 238
Query: 279 KVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNI 338
NNY+TDL P+IK A+ LA V + ++L++I DH+R++ +L++DGV PSN
Sbjct: 239 GKTNNYDTDLFQPLIKAAAALAGVDDTTCSAEQLVSLRVIADHIRSVSFLIADGVLPSNE 298
Query: 339 GRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRI 398
GRGYV+RR++RR +R GRLLG LE F+ + E L ++ A+ + +
Sbjct: 299 GRGYVLRRIMRRGMRHGRLLG--------LEQPFMHKLVETLGALMGDTYPELTAQRKTL 350
Query: 399 LEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEI 458
++ EE RF TL G K L++ +A G V L G+ F LYDTFGFP+++
Sbjct: 351 AMVIETEEKRFAATLGTGLKHLEEAVAGL-----RMGDV--LDGKTLFTLYDTFGFPLDL 403
Query: 459 TKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSA--DLAEKIPDTEFLGYD 516
T ++ + + VD +GF M+ QR +++AA + + + L E++ +EFLGY
Sbjct: 404 TADILRDREIGVDQEGFSACMKEQRERARAAWSGSGEASLGALYHPLLERVGASEFLGYV 463
Query: 517 TLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQT 576
SA A V +L+ NG V ++ G + V+ N+TPFY ESGGQ+GD G + + G
Sbjct: 464 HESASASVVALIKNGAEVESLTAGDEGSVVCNQTPFYGESGGQVGDRGVIQLANG----- 518
Query: 577 AVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALK 636
A V D +K L + VH G + G + +G E VD RQ ++HH+ATHL+ AL+
Sbjct: 519 ARFTVTDTQKPLPDLIVHHGKMVTGTVHLGDHAELQVDGATRQAIRLHHSATHLMHHALR 578
Query: 637 KVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDD 696
V+G+ QAGS V+ +RLR DF+ + + + EL +E +NG I +T VM +
Sbjct: 579 AVLGEHVKQAGSHVSAERLRLDFSHFQGMSEEELRAVEDRVNGAILSNVSQETAVMTPQE 638
Query: 697 AKRAGAIAMFGEKYGEQVKI 716
A AGA+A+FGEKYG++V++
Sbjct: 639 AVAAGAMALFGEKYGDEVRV 658
>gi|410646584|ref|ZP_11357034.1| alanyl-tRNA synthetase [Glaciecola agarilytica NO2]
gi|410133756|dbj|GAC05433.1| alanyl-tRNA synthetase [Glaciecola agarilytica NO2]
Length = 865
Score = 557 bits (1436), Expect = e-156, Method: Compositional matrix adjust.
Identities = 306/675 (45%), Positives = 432/675 (64%), Gaps = 44/675 (6%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FL+F+A +GH+ + S+SLVP +DPT+L T AGM QFK +FLG R+ RA +SQR
Sbjct: 8 IRQAFLNFFADKGHQKVSSSSLVPSDDPTLLFTNAGMNQFKDVFLGTEQRKYTRATSSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI +AW F T E LP +L
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQQAIAYAWTFLTQELKLPKEKLL 127
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDF--HPDRG 225
+++Y +DDEAF+IW+ E+GVP E I R+ DNFW+ G TGPCGPCSEI+YD H G
Sbjct: 128 VTIYSEDDEAFDIWHNEIGVPKEKIIRIATSDNFWSMGDTGPCGPCSEIFYDHGEHIWGG 187
Query: 226 CSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYE 285
D RFIE +NLVFMQ+N++ +G + PL + +IDTG+GLERI+ ILQ V +NYE
Sbjct: 188 PPGTPEEDGDRFIEIWNLVFMQFNRQANGDMLPLPKPSIDTGMGLERISAILQNVHSNYE 247
Query: 286 TDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVR 345
D+ +IK +E+ S + +L+++ DH+R+ +L+SDGV PSN GRGYV+R
Sbjct: 248 IDIFQNLIKATAEIVGTSSLEDK-----SLRVVADHIRSCSFLISDGVMPSNEGRGYVLR 302
Query: 346 RLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEE--LK 403
R+IRRAVR G LG KG F +A A E+ D+ + EQR + E L+
Sbjct: 303 RIIRRAVRHGNKLGAKGV-------FFYKLVAALATEMG---DAYPELNEQRAVIEKVLR 352
Query: 404 REELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVA 463
EE +F +TLERG +L+ DALS E VP G+ F LYDT+GFP ++T +VA
Sbjct: 353 VEEEQFSRTLERGMLILN----DALSEL-EGKVVP---GELVFKLYDTYGFPADLTNDVA 404
Query: 464 EEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTLSAKAI 523
E G+S+D +GF+ M QR+++Q A N +D + L + ++ F+GY+ A
Sbjct: 405 REKGLSIDEEGFEQAMAEQRKRAQKASN---FDLDYNEQLRSDL-ESVFVGYELEQNTAQ 460
Query: 524 VESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKD 583
++ + V G+ V +++ G++ ++L+ +PFYAE+GGQ GD G L G EV+D
Sbjct: 461 IKEIFVQGQSVAEITAGTEGTIILDESPFYAEAGGQAGDAGTLVKDSGG------FEVQD 514
Query: 584 VKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQET 643
K LG HKG L+VG V+A V+ R K++H+ATHL+ AALK V+G+
Sbjct: 515 TVK-LGKAIAHKGAALS-ELKVGDSVQANVNGARRHAIKLNHSATHLMHAALKSVLGEHV 572
Query: 644 SQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAI 703
+Q GSLV +RLRFDF+ + + ++ +E ++N I + LQTK+M L+ AK AGA+
Sbjct: 573 NQKGSLVQPERLRFDFSHYEAMTKEQVLAVETMVNEQILANHALQTKLMGLEQAKEAGAM 632
Query: 704 AMFGEKYGEQVKISS 718
A+FGEKY + V++ S
Sbjct: 633 ALFGEKYDDDVRVVS 647
>gi|410584332|ref|ZP_11321435.1| alanyl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965]
gi|410504267|gb|EKP93778.1| alanyl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965]
Length = 905
Score = 557 bits (1436), Expect = e-156, Method: Compositional matrix adjust.
Identities = 304/676 (44%), Positives = 424/676 (62%), Gaps = 34/676 (5%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+RFL F+ GH ++PS+SLVP +DPT+L T AGM+QFK +F GK RA T+Q+
Sbjct: 21 IRERFLRFFERHGHTIVPSSSLVPKDDPTLLFTNAGMVQFKDVFTGKEKVPYKRATTAQK 80
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
C+R ND+ENVG+T+RHHTFFEMLGNFSFGDYFK+EAI +AW F T E GLP RLW
Sbjct: 81 CMRAGGKHNDLENVGKTARHHTFFEMLGNFSFGDYFKREAIHFAWTFLTEELGLPRERLW 140
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYD----FHPD 223
+++ DDDEAF +W + G+P E I R+G DNFW G TGPCGPCSEI YD F D
Sbjct: 141 ATIFRDDDEAFGLWQEVTGIPAERIVRLGEKDNFWAMGDTGPCGPCSEIVYDRGEEFRCD 200
Query: 224 RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNN 283
+ D R++E +NLVFMQ+N+ + G LEPL + +IDTG+GLERIA ++Q V +N
Sbjct: 201 AEVCGIGACDCDRWLEIWNLVFMQFNRDESGRLEPLPRPSIDTGMGLERIASVMQGVGSN 260
Query: 284 YETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYV 343
++TDL P+++ +L Y ++I DH RA +L++DGV PSN GRG+V
Sbjct: 261 FDTDLFRPLLRAVEDLTGRPY--DGGEAGFPFRVIADHARACTFLIADGVLPSNEGRGHV 318
Query: 344 VRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELK 403
+RR++RRAVR GR+LG LE FL + + E+ +V+ R + ++
Sbjct: 319 LRRILRRAVRFGRILG--------LEEPFLYRLVDTVGEVMGDAYPEVRQRADYVRRVIR 370
Query: 404 REELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVA 463
EE RF +TL++G + LA+ + R R+ G + G++AF+LYDT+GFP+++T++ A
Sbjct: 371 GEEERFFRTLDQGMAI----LAEVIERARQRGD-GLIHGEEAFVLYDTYGFPLDLTEDAA 425
Query: 464 EEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKI---PDTEFLGYDTLSA 520
EE G+ VD +GF+ M QR++++AA V+ D + LA + P TEF GY+ L
Sbjct: 426 EEAGLRVDREGFERAMAVQRQRARAARE-VEEGWDPGSPLARALADEPATEFTGYERLED 484
Query: 521 KAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVE 580
+ V L+ +P + G +V V+L+RTPFYAE GGQ+GD G+L + A +E
Sbjct: 485 EGTVRLLVRRDEPADRADAGEEVGVILDRTPFYAERGGQVGDTGWLETPR------ARLE 538
Query: 581 VKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIG 640
V D + G +HK + EG ++VG V A VD R +HTATHLL AALK+V+G
Sbjct: 539 VLDTQPLPGGRILHKARVVEGAVQVGDRVRARVDAARRAAIMRNHTATHLLHAALKRVLG 598
Query: 641 QETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRA 700
+QAGSLVA DRLRFDF +L IE IN I ++ +L++A A
Sbjct: 599 DHVNQAGSLVAPDRLRFDFTHFEAPTAGQLRAIEDEINQQILRGIPVRWYWTSLEEALEA 658
Query: 701 GAIAMFGEKYGEQVKI 716
GA+A+FGEKYG +V++
Sbjct: 659 GALALFGEKYGNEVRV 674
>gi|205830247|sp|A1S4E9.2|SYA_SHEAM RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
Length = 873
Score = 557 bits (1436), Expect = e-156, Method: Compositional matrix adjust.
Identities = 309/680 (45%), Positives = 430/680 (63%), Gaps = 48/680 (7%)
Query: 52 SIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQ 110
++R FL+++ +GH+V+ S+SLVP DPT+L T AGM QFK FLG R RAAT+Q
Sbjct: 7 ALRSAFLEYFRQQGHQVVDSSSLVPGNDPTLLFTNAGMNQFKDCFLGMEKRSYVRAATAQ 66
Query: 111 RCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRL 166
RC+R ND++NVG T+RHHTFFEMLGNFSFGDYFK++AI++AWEF T LP +L
Sbjct: 67 RCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKEDAIRFAWEFLTGTLKLPKEKL 126
Query: 167 WISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYYD 219
++VY DDEAF+IWNK++GVP E+I R+G A DNFW G TGPCGPC+EI+YD
Sbjct: 127 CVTVYHTDDEAFDIWNKQIGVPAENIIRIGDNKGAPFASDNFWQMGDTGPCGPCTEIFYD 186
Query: 220 F--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARIL 277
H G D RFIE +N+VFMQYN++ DG+L+PL + +DTG+G+ERI+ I+
Sbjct: 187 HGEHIWGGRPGSPEEDGDRFIEIWNIVFMQYNRQSDGTLDPLPKPAVDTGMGIERISAIM 246
Query: 278 QKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSN 337
Q V +NYE D+ +I KA+E+ VS D N +L++I DH+R+ +L++DGV PSN
Sbjct: 247 QGVHSNYEIDIFQKLIAKAAEIIGVS-----DLENKSLRVIADHIRSCAFLVADGVMPSN 301
Query: 338 IGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQR 397
GRGYV+RR+IRRAVR G LG F + IE ++KA +
Sbjct: 302 EGRGYVLRRIIRRAVRHGNKLGAT--------DTFFYKLVPTLIEAMGDAAKELKATQTI 353
Query: 398 ILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVE 457
+ + LK EE +F +TLERG +LD LAD T L G+ F LYDT+GFPV+
Sbjct: 354 VEKALKAEEEQFARTLERGLGMLDAALADLKGDT--------LDGETVFKLYDTYGFPVD 405
Query: 458 ITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKI-PDTEFLGYD 516
+T +V E + VD +GF+ M QR ++QAA + S D +A L KI T+F GY
Sbjct: 406 LTADVCRERNLKVDEEGFNAAMAEQRSRAQAAG---QFSADYNAAL--KIDTATDFCGYT 460
Query: 517 TLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQT 576
L+A++ V +L +G+ V G+ + V+L+ TPFYAESGGQ+GD G L + +G
Sbjct: 461 ELAAESKVVALYRDGESVDAAEAGAVLVVVLDNTPFYAESGGQVGDKGQL-LAEGVE--- 516
Query: 577 AVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALK 636
V D +K G HKG + G ++VG ++A+VD KLR R +++H+ THLL AAL+
Sbjct: 517 --FNVADTQK-FGQGIGHKGQLALGSIKVGDSLKAMVDKKLRHRTELNHSVTHLLHAALR 573
Query: 637 KVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDD 696
+V+G +Q GSLV +RLRFDF+ + EL+ +E L+N I + L M +++
Sbjct: 574 QVLGTHVTQKGSLVDPERLRFDFSHFEGVKREELKAVEDLVNTQIRRNHELNFAEMDIEE 633
Query: 697 AKRAGAIAMFGEKYGEQVKI 716
AK GA+A+FGEKY +V++
Sbjct: 634 AKAKGAMALFGEKYDSKVRV 653
>gi|365898632|ref|ZP_09436577.1| alanyl-tRNA synthetase [Bradyrhizobium sp. STM 3843]
gi|365420543|emb|CCE09119.1| alanyl-tRNA synthetase [Bradyrhizobium sp. STM 3843]
Length = 889
Score = 557 bits (1435), Expect = e-156, Method: Compositional matrix adjust.
Identities = 300/676 (44%), Positives = 421/676 (62%), Gaps = 35/676 (5%)
Query: 51 DSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATS 109
+ IR FL+F+A GH+++PS+ LVP DPT++ T AGM+QFK +F G R RA TS
Sbjct: 5 NEIRSTFLNFFAENGHEIVPSSPLVPRNDPTLMFTNAGMVQFKNVFTGVEKRPYSRATTS 64
Query: 110 QRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANR 165
Q+C+R ND++NVG T+RHHTFFEMLGNFSFGDYFK AI+ AW+ T EFGLP +
Sbjct: 65 QKCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKDNAIELAWKLVTREFGLPKEK 124
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDR- 224
LW +VY DDDEAF++W K G+P I R+ DNFW G TGPCGPCSEI+YD H D+
Sbjct: 125 LWATVYIDDDEAFDLWRKISGLPESRIIRIAGSDNFWQMGDTGPCGPCSEIFYD-HGDKV 183
Query: 225 --GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPN 282
G D R+IE +NLVFMQY + + G L + +IDTG GLER+A +LQ +
Sbjct: 184 WGGPPGSPEADGDRYIEIWNLVFMQYEQFEGGERVRLPKPSIDTGAGLERVAAVLQGKHD 243
Query: 283 NYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGY 342
NY+ DL +I+ ++L N A +L++I DHLRA +L+SDGV PSN GRGY
Sbjct: 244 NYDIDLFVALIRAIADLTN---ADPQGPQKASLRVIADHLRASSFLISDGVLPSNEGRGY 300
Query: 343 VVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEEL 402
V+RR++RRA+R +LLG + L G + + EL ++A E I E L
Sbjct: 301 VLRRIMRRAMRHAQLLGAREPLMHRLVGTLTREMGQAYPEL-------IRA-EALIKETL 352
Query: 403 KREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEV 462
+ EE RF +TLERG +LD+ A + G + G AF LYDT+GFP+++T++
Sbjct: 353 RLEETRFRKTLERGLAILDEKAAGL-----KQGDM--FDGDTAFTLYDTYGFPLDLTQDA 405
Query: 463 AEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSA--DLAEKIPDTEFLGYDTLSA 520
+ G+SVD F M+ QR +++AA + ++ L EK+ TEFLGY+ +A
Sbjct: 406 LKSRGISVDQASFTDAMDRQRAKARAAWAGSGEAATETVWFPLREKLGATEFLGYEIETA 465
Query: 521 KAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVE 580
+ V +L+ +G V +SKG ++LN+TPFYAESGGQ+GD G +
Sbjct: 466 EGAVTALVKDGAEVDSLSKGDAGAIVLNQTPFYAESGGQVGDIGVM------RGDGVTFR 519
Query: 581 VKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIG 640
V D +K G +FVH GT+ EG L++G ++ VD R + +H+ATH+L AL++V+G
Sbjct: 520 VTDTQKKAGDLFVHLGTVEEGTLKLGTALQLDVDHGRRSAIRANHSATHILHEALRQVLG 579
Query: 641 QETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRA 700
+Q GSLV+ DRLRFDF +P+ EL +E + N + + + + T++MALDDA+ A
Sbjct: 580 DHIAQRGSLVSPDRLRFDFAHPKPISPDELARVEDIANDVVLENSEVTTRLMALDDAREA 639
Query: 701 GAIAMFGEKYGEQVKI 716
GA A+FGEKYG++V++
Sbjct: 640 GARALFGEKYGDEVRV 655
>gi|296327899|ref|ZP_06870435.1| alanine--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum ATCC
23726]
gi|296155033|gb|EFG95814.1| alanine--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum ATCC
23726]
Length = 867
Score = 557 bits (1435), Expect = e-156, Method: Compositional matrix adjust.
Identities = 289/674 (42%), Positives = 431/674 (63%), Gaps = 35/674 (5%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
+G+ IR++F++F+ + HK SASL+P+DPT+LLT+AGM+ FKP FLG+ R T
Sbjct: 3 TGNEIREKFIEFFMQKQHKHFESASLIPDDPTLLLTVAGMVPFKPYFLGQKEAPCSRVTT 62
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
Q+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFKKEAI+W+WEF T + ++LW+
Sbjct: 63 YQKCIRTNDLENVGRTARHHTFFEMLGNFSFGDYFKKEAIKWSWEFVTEVLKINKDKLWV 122
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYD----FHPDR 224
+V+ DDEA +IW +E P E I RMG +N+W++G TG CGPCSEI+ D + D
Sbjct: 123 TVFTTDDEAEKIWVEECNFPKERIVRMGESENWWSAGPTGSCGPCSEIHVDLGVQYGGDE 182
Query: 225 GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNY 284
D G D RFIE +NLVF ++N+ +DGSLEPL +KNIDTG GLERIA ++Q NN+
Sbjct: 183 NSKIGDEGTDNRFIEIWNLVFTEWNRMEDGSLEPLPKKNIDTGAGLERIAAVVQGKTNNF 242
Query: 285 ETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVV 344
ETDL+FPI+++A ++ Y + N TN +LK+I DH RA+ +L++DGV PSN GRGY++
Sbjct: 243 ETDLLFPILEEAGKITGSQYGK-NPETNFSLKVITDHARAVTFLVNDGVIPSNEGRGYIL 301
Query: 345 RRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKR 404
RR++RRAVR GRLLG F+ + +K +E D++ + I + +K
Sbjct: 302 RRILRRAVRHGRLLG--------YTDLFMYKMVDKVVEKFEVAYPDLRKNLENIRKIVKI 353
Query: 405 EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAE 464
EE +F TL++G +L++Q + + L + +L G+ +F LYDT+GFP E+T+E+AE
Sbjct: 354 EEEKFSNTLDQGIQLVNQEIDNLLINGKN-----KLDGEISFKLYDTYGFPYELTEEIAE 408
Query: 465 EHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDS--ADLAEKIPDTEFLGYDTLSAKA 522
E G++V + F+ +ME Q+ ++++A V DS + +K TEF GY+ +
Sbjct: 409 ERGITVLREEFEAKMEEQKEKARSAREVVMEKGQDSFIEEFYDKYGVTEFTGYEKTEDEG 468
Query: 523 IVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVK 582
+ SL + +K ++ ++TPFY ESGGQIGD G +Y N + V++V+
Sbjct: 469 KLLSL--------REAKDRKYLLIFDKTPFYGESGGQIGDQGKIY---SDNFEAKVLDVQ 517
Query: 583 DVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQE 642
K +F+H +G+ E + + VD R +HTATHLL AL++V+G
Sbjct: 518 KQK----DIFIHTVKFEKGIPEENKTYKLEVDVIKRLDTAKNHTATHLLHKALREVVGTH 573
Query: 643 TSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGA 702
QAGSLV ++LRFDF+ + L + +L +IE ++N I + + ++++AK+ GA
Sbjct: 574 VQQAGSLVDSEKLRFDFSHYEALTEEQLSKIEDIVNKKIREGIEVVVSHHSIEEAKKLGA 633
Query: 703 IAMFGEKYGEQVKI 716
+ +FG+KYG+ V++
Sbjct: 634 MMLFGDKYGDVVRV 647
>gi|340756775|ref|ZP_08693380.1| alanyl-tRNA synthetase [Fusobacterium varium ATCC 27725]
gi|251834042|gb|EES62605.1| alanyl-tRNA synthetase [Fusobacterium varium ATCC 27725]
Length = 866
Score = 557 bits (1435), Expect = e-156, Method: Compositional matrix adjust.
Identities = 297/676 (43%), Positives = 435/676 (64%), Gaps = 35/676 (5%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
+G+ IRK F++F+ ++ HK SASL+P+D T+LLT+AGM+ FKP FLG+ PR T
Sbjct: 3 TGNQIRKEFIEFFEAKHHKHFESASLIPDDATLLLTVAGMVPFKPYFLGQKEAPYPRVTT 62
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
Q+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFKKEAIQW+WEF T + ++LW+
Sbjct: 63 YQKCIRTNDLENVGRTARHHTFFEMLGNFSFGDYFKKEAIQWSWEFVTEVLKIDKDKLWV 122
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
SV+ DDEA +IW ++ P E + R+G D+N+W +G TG CGPCSEI+ D P G +
Sbjct: 123 SVFTTDDEAEQIWIEKCNFPKERLVRLGEDENWWAAGPTGSCGPCSEIHVDLGPAYGGDE 182
Query: 229 V----DLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNY 284
D G D RFIE +NLVF ++N+ +DGSLEPL +KNIDTG GLERIA ++Q NN+
Sbjct: 183 NSKLGDEGTDNRFIEIWNLVFTEWNRMEDGSLEPLPKKNIDTGAGLERIAAMVQGKSNNF 242
Query: 285 ETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVV 344
ETDL+FP+I++A++L N Y + ++ N +LK+I DH RA+ +L++DGV PSN GRGYV+
Sbjct: 243 ETDLLFPLIEEAAKLTNSQYGR-DEEENFSLKVITDHSRAVTFLINDGVIPSNEGRGYVL 301
Query: 345 RRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKR 404
RR++RRAVR GRLLG FL + +K + + + D+++ + I + +K
Sbjct: 302 RRILRRAVRHGRLLG--------HSELFLYKMVDKVVSMMENAYPDLRSNVEHIKKVVKI 353
Query: 405 EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAE 464
EE +F +TL++G +L++Q + ++ ++ +L G+ F LYDT+GFP E+T+E+ +
Sbjct: 354 EEEKFSRTLDQGMQLVNQEI-----EKLKAANITKLDGEVTFKLYDTYGFPYELTEEICQ 408
Query: 465 EHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDS--ADLAEKIPDTEFLGYDTLSAKA 522
E G+ + + F+ +M Q+ +++AA V DS + ++ TEF GY TL
Sbjct: 409 EKGIEISKEEFEAKMTEQKEKARAAREVVMEKGQDSFIEEFYDRYGATEFSGYTTLKDTG 468
Query: 523 IVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVK 582
+ S +GK K+ ++ + TPFY ESGGQ D G + G + V+
Sbjct: 469 KLLSSR-DGKDNKKL-------MIFDVTPFYGESGGQAADIGMI---TGNGFEGKVI--- 514
Query: 583 DVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQE 642
DV+K G +F+H + +G G E +D R +HTATHLL AL++V+G
Sbjct: 515 DVQKQKG-IFIHTVEVLKGTPIEGEEYFLEIDEANRMATAKNHTATHLLHEALREVLGSH 573
Query: 643 TSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGA 702
QAGS V +RLRFDFN + + ELE++E L+N I +A ++ M++D+AK+AGA
Sbjct: 574 VQQAGSFVNGERLRFDFNHYEAMTAEELEKVEELVNEKIAEAIDVKIANMSMDEAKKAGA 633
Query: 703 IAMFGEKYGEQVKISS 718
A+FG+KYG+ V++ S
Sbjct: 634 TALFGDKYGDVVRVVS 649
>gi|205830049|sp|Q39HB7.2|SYA_BURS3 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
Length = 874
Score = 557 bits (1435), Expect = e-156, Method: Compositional matrix adjust.
Identities = 301/679 (44%), Positives = 426/679 (62%), Gaps = 44/679 (6%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR++FL F+ S+GH ++ S+SLVP DPT++ T +GM+QFK +FLG PR RA T+QR
Sbjct: 6 IREKFLKFFESKGHTIVRSSSLVPGNDPTLMFTNSGMVQFKDVFLGTDPRPYSRATTAQR 65
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AI++AWE T + LP ++LW
Sbjct: 66 SVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIKFAWELLTTVYQLPKDKLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYYDF 220
++VY++DDEA++IW KEVGVP E I R+G A DNFW G TGPCGPC+EI+YD
Sbjct: 126 VTVYQEDDEAYDIWAKEVGVPTERIIRIGDNKGARYASDNFWTMGDTGPCGPCTEIFYDH 185
Query: 221 HPD--RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQ 278
PD G D R+IE +NLVFMQ+N+ G++ L ++++DTG+GLER+A +LQ
Sbjct: 186 GPDVWGGPPGSPEEDGDRYIEIWNLVFMQFNRDAQGNMTRLPKQSVDTGMGLERLAAVLQ 245
Query: 279 KVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNI 338
V +NYE DL +IK A+ + +S D TN +LK+I DH+RA +L+ DGV P N
Sbjct: 246 HVHSNYEIDLFQNLIKAAARVTEIS-----DLTNNSLKVIADHIRACSFLIVDGVIPGNE 300
Query: 339 GRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRI 398
GRGYV+RR++RRA+R G LG KG F +A+ E+ ++K EQR+
Sbjct: 301 GRGYVLRRIVRRAIRHGYKLGRKGS-------FFHKLVADLVAEMGVAY-PELKEAEQRV 352
Query: 399 LEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEI 458
+ L++EE RF +T+E G +L+ LAD ++ G V L G+ AF L+DT+GFP+++
Sbjct: 353 TDVLRQEEERFFETIEHGMSILEGALADVEAK---GGKV--LDGELAFKLHDTYGFPLDL 407
Query: 459 TKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTL 518
T +V E G++VD FD M QR Q++AA + L T F GY+ +
Sbjct: 408 TADVCRERGMTVDEPAFDDAMARQREQARAAGK-----FKAAQGLEYTGAKTTFHGYEEI 462
Query: 519 S-AKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTA 577
+ A + +L V+G V +V G D V+L+ TPFYAESGGQ+GD G L N T
Sbjct: 463 AFDDAKIVALYVDGSSVNEVKTGQDAVVVLDHTPFYAESGGQVGDQGVL-----ANAATR 517
Query: 578 VVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKK 637
V D K V H GT+ +G L+VG + A +D R R + +H+ATHL+ AL++
Sbjct: 518 FA-VADTLKVQADVIGHHGTLEQGTLKVGDVLRAEIDAHRRARTQRNHSATHLMHKALRE 576
Query: 638 VIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDA 697
V+G Q GSLV ++ RFDF + P+ D E+ +E+++N I +VM D+A
Sbjct: 577 VLGAHVQQKGSLVDAEKTRFDFAHNAPMTDDEIRRVEQIVNNEILANAPGIVRVMPYDEA 636
Query: 698 KRAGAIAMFGEKYGEQVKI 716
+ GA+A+FGEKYG++V++
Sbjct: 637 VKGGAMALFGEKYGDEVRV 655
>gi|347540650|ref|YP_004848075.1| alanyl-tRNA synthetase [Pseudogulbenkiania sp. NH8B]
gi|345643828|dbj|BAK77661.1| alanyl-tRNA synthetase [Pseudogulbenkiania sp. NH8B]
Length = 877
Score = 557 bits (1435), Expect = e-156, Method: Compositional matrix adjust.
Identities = 306/683 (44%), Positives = 428/683 (62%), Gaps = 51/683 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR++FLDF+AS+GH+V+PS+SL+P DPT++ T+AGM+QFK +FLG R RA TSQ+
Sbjct: 6 IRQKFLDFFASKGHQVVPSSSLIPGNDPTLMFTVAGMVQFKDVFLGFEKRDYTRATTSQK 65
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AI +AWEF T E LP +
Sbjct: 66 CLRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAITYAWEFLTGEQWLALPKEK 125
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
L ++VY DDEAF+IW+K VG+PVE I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 126 LMVTVYASDDEAFDIWHKTVGLPVEKIVRIGDNKGAAYASDNFWTMGDTGPCGPCTEIFY 185
Query: 219 DFHPD-----RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERI 273
D + G D D GD RF+E +N VFMQ+N+ + G+L PL + ++DTG+GLER+
Sbjct: 186 DHGEEVAGGPPGSPDED-GD--RFMEIWNNVFMQFNRDETGTLHPLPKPSVDTGMGLERL 242
Query: 274 ARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGV 333
+ +LQ V +NYETD + +++ A+ V Y+Q+ +LK+I DH+RA ++++DG+
Sbjct: 243 STVLQHVKSNYETDGLACLVRAAARETGVEYSQNVP----SLKVIADHIRACSFMIADGI 298
Query: 334 FPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKA 393
PSN GRGYV+RR+ RRA+R G LG KG F I +E +++
Sbjct: 299 LPSNEGRGYVLRRIARRAIRHGYKLGQKG--------LFFHKIVADLVEEMGGAYPELRQ 350
Query: 394 REQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFG 453
++ I + L+ EE+RF +TLE G L+D L G R+ G F LYDTFG
Sbjct: 351 QQAHIEDNLRAEEVRFAETLEHGMALVDAAL---------QGGKARMDGDTIFKLYDTFG 401
Query: 454 FPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFL 513
FPV++T ++ E + VDM+GF+ M QR +++AA S + +L DT F
Sbjct: 402 FPVDLTADICRERNIEVDMEGFEHAMNAQRERARAAS-----SFKMTGNLEYAGADTRFH 456
Query: 514 GYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTN 573
GY+T S A V +L PV ++++G + V+L+ T FYAE GGQ+GD G + V+ G
Sbjct: 457 GYETASVDAKVLALFKGNTPVEQLAEGEEGVVVLDDTAFYAEGGGQVGDCGEISVSGGVG 516
Query: 574 QQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQA 633
A+ +V D +K + F H G + G L VG V+A +D R +H+ATHLL A
Sbjct: 517 ---ALFDVTDTQKIKAATFGHSGRVVRGALHVGDTVQATIDLHKRLATARNHSATHLLHA 573
Query: 634 ALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMA 693
AL+ V+G +Q GSLV +R RFDF P+ ++ EIER++N + + VMA
Sbjct: 574 ALRHVLGGHVAQKGSLVNAERTRFDFAHGEPVSAAQIAEIERVVNRIVLHNVEVSANVMA 633
Query: 694 LDDAKRAGAIAMFGEKYGEQVKI 716
DDA RAGAIA+FGEKYG++V++
Sbjct: 634 YDDAIRAGAIALFGEKYGDEVRV 656
>gi|421464013|ref|ZP_15912706.1| alanine--tRNA ligase [Acinetobacter radioresistens WC-A-157]
gi|400206387|gb|EJO37364.1| alanine--tRNA ligase [Acinetobacter radioresistens WC-A-157]
Length = 897
Score = 557 bits (1435), Expect = e-156, Method: Compositional matrix adjust.
Identities = 315/703 (44%), Positives = 442/703 (62%), Gaps = 57/703 (8%)
Query: 43 SQDFPSSGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPR 101
S F +S + IR+ FL ++ S+GH + S+SLVP DPT+L T AGM QFK FLG R
Sbjct: 2 STRFMTSAE-IREAFLRYFESQGHTRVASSSLVPANDPTLLFTNAGMNQFKDCFLGAEKR 60
Query: 102 QVPRAATSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTV 157
RA +SQ+C+R ND++NVG T+RHHTFFEMLGNFSFGDYFK++AI++AWEF T
Sbjct: 61 DYVRAVSSQKCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKRDAIKFAWEFLTS 120
Query: 158 E--FGLPANRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATG 208
E LP +RL+ +VY DDEAF+IWNKE+G+ E I R+G A DNFW G TG
Sbjct: 121 EQWLALPKDRLYATVYHTDDEAFDIWNKEIGLDAERIIRIGDNKGEKYASDNFWAMGDTG 180
Query: 209 PCGPCSEIYYDFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNID 265
PCGPCSEI+YD H D G D RFIE +N VFMQ+N+ DG L L ++D
Sbjct: 181 PCGPCSEIFYD-HGDHIWGGLPGTPEEDGDRFIEIWNNVFMQFNRTADGVLHALPAPSVD 239
Query: 266 TGLGLERIARILQKVPNNYETDLIFPIIKKASELANVSYA----QSNDRTN-----LNLK 316
TG+GLERI+ +LQ V +NYE DL ++K A+E+ V A ++ ++ +LK
Sbjct: 240 TGMGLERISAVLQHVNSNYEIDLFQHLLKAAAEIIGVDTASLEAEAKEKNTPVQYPASLK 299
Query: 317 IIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSI 376
++ DH R+ +L++DGV PSN GRGYV+RR+IRRAVR G LG G F +
Sbjct: 300 VVADHARSCCFLIADGVNPSNEGRGYVLRRIIRRAVRHGNKLGATG--------TFFYKM 351
Query: 377 AEKAIELSTHIDSDVKAREQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGS 436
+ IE+ +++A + RI L +EE +F +TLE+G KLL+ L T+ GS
Sbjct: 352 LQPLIEVMGTAYPELEANKARIEAALIKEEEQFAKTLEQGLKLLEGEL------TQLKGS 405
Query: 437 VPRLSGQDAFLLYDTFGFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLS 496
+ + G+ F LYDT+GFPV++T ++A E +S+D GF+ EM QR Q A A K +
Sbjct: 406 I--IPGEIVFKLYDTYGFPVDLTADIARERDLSIDEAGFEKEMAAQR---QRAREAGKFA 460
Query: 497 VDDSADLAEKIPD-TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAE 555
VD ++ + K+ D TEF GYD + + ++ +G V +V++G + ++L++TPFYAE
Sbjct: 461 VDYNSIV--KVEDETEFSGYDATEGQGQIIAIYKDGTLVDEVTEGDEALIVLDQTPFYAE 518
Query: 556 SGGQIGDYGFLYVTQGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDP 615
SGGQIGD G +T + EV+D KKS GS FVH+G + G L+V + VEA V
Sbjct: 519 SGGQIGDTGIF------KNETGIFEVQDTKKS-GSAFVHQGIVTMGNLKVTQNVEATVKA 571
Query: 616 KLRQRAKVHHTATHLLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIER 675
+LR +H+ATHLL AAL++++G Q GSLVA D LRFDF +P+ +L++IER
Sbjct: 572 ELRAATARNHSATHLLHAALRQILGSHVQQKGSLVASDILRFDFANDQPVTFEQLQQIER 631
Query: 676 LINGWIGDANLLQTKVMALDDAKRAGAIAMFGEKYGEQVKISS 718
L+N + + T+++ ++ AK GA+ +FGEKYG +V++ S
Sbjct: 632 LVNAEVIANTAVTTELLDIETAKTKGAMMLFGEKYGSEVRVLS 674
>gi|125975678|ref|YP_001039588.1| alanyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
gi|205830037|sp|A3DKB6.1|SYA_CLOTH RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|125715903|gb|ABN54395.1| alanyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
Length = 880
Score = 557 bits (1435), Expect = e-156, Method: Compositional matrix adjust.
Identities = 304/672 (45%), Positives = 434/672 (64%), Gaps = 27/672 (4%)
Query: 51 DSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATS 109
+ +R+RFL F+ S+GH LPS SL+P+ DP++LL +GM KP F G+ R T
Sbjct: 7 NELRERFLKFFESKGHLRLPSFSLIPQNDPSLLLINSGMAPLKPYFTGQEEPPRRRVTTC 66
Query: 110 QRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWIS 169
Q+CIRT D+ENVG+T+RH TFFEMLGNFSFGDYFK EAI WAWEF T + +P RLW+S
Sbjct: 67 QKCIRTPDIENVGKTARHGTFFEMLGNFSFGDYFKNEAIPWAWEFFTEDLKIPVERLWVS 126
Query: 170 VYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCS-- 227
+YEDDDEAFEIWNK+VG+P E I RMG D+NFW G TGPCGPCSEIY+D D+GC
Sbjct: 127 IYEDDDEAFEIWNKKVGLPPERIVRMGKDNNFWEHG-TGPCGPCSEIYFDRGEDKGCGKP 185
Query: 228 DVDLGDDT-RFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYET 286
D +G D RFIE +NLVF Q+NK++DGS LK NIDTG+GLER+A ++Q V N +E
Sbjct: 186 DCKVGCDCDRFIEVWNLVFTQFNKEEDGSYSRLKNPNIDTGMGLERLACVMQDVNNLFEV 245
Query: 287 DLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRR 346
D I ++ ++ V Y S+++T++++++I DH+R+ ++SDGV PSN GRGYV+RR
Sbjct: 246 DTIRRVLDYICKITGVEYG-SSEKTDVSIRVITDHIRSTTMMISDGVIPSNEGRGYVLRR 304
Query: 347 LIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREE 406
L+RRA R G+LLG ++ FL +A I+ S ++ R + I + ++ EE
Sbjct: 305 LLRRAARHGKLLG--------MDRPFLSDVASVVIKESKGAYPELAERAENIKKVIRIEE 356
Query: 407 LRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEH 466
+F +T+++G +L + + + TR+ G +SG F L+ T+GFPV++T+E+AEE+
Sbjct: 357 EKFEETIDQGLVILSKYIEE----TRKKGE-KVISGDVVFELHGTYGFPVDLTREIAEEN 411
Query: 467 GVSVDMKGFDIEMENQRRQSQAAHNAVKLSV--DDSADLAEKIPDTEFLGYDTLSAKAIV 524
G+ VD +GF +M+ + ++ + + + S DD +K TEFLGY A A V
Sbjct: 412 GLGVDEEGFREKMKEHQNLAREDYQSKQGSAWGDDIYSKLDKSVKTEFLGYTESEATARV 471
Query: 525 ESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDV 584
++ + V + KG V V+L+RTPFYAESGGQ+GD G + + A V+V D
Sbjct: 472 LYIIKEDQVVDEAQKGDSVTVILDRTPFYAESGGQVGDKGLI------EAEGARVKVLDC 525
Query: 585 KKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETS 644
KK+ ++H G I EG L G EV+A +D K R +HT THLL AL+ V+G +
Sbjct: 526 KKTNDGKYLHIGEIEEGTLRNGMEVKATIDKKRRMAIARNHTTTHLLHKALRNVLGSHVN 585
Query: 645 QAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIA 704
QAGSLV DRLRFDF + E++ +E +N I ++ + + M++D+A++ GA A
Sbjct: 586 QAGSLVEPDRLRFDFTHFSAMTPEEIKSVEDQVNEKILESIAVDIREMSIDEARKMGATA 645
Query: 705 MFGEKYGEQVKI 716
+FGEKYG+ V++
Sbjct: 646 LFGEKYGDVVRV 657
>gi|171321470|ref|ZP_02910415.1| alanyl-tRNA synthetase [Burkholderia ambifaria MEX-5]
gi|171093253|gb|EDT38456.1| alanyl-tRNA synthetase [Burkholderia ambifaria MEX-5]
Length = 874
Score = 557 bits (1435), Expect = e-156, Method: Compositional matrix adjust.
Identities = 301/679 (44%), Positives = 426/679 (62%), Gaps = 44/679 (6%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR++FL F+ S+GH ++ S+SLVP DPT++ T +GM+QFK +FLG PR RA T+QR
Sbjct: 6 IREKFLKFFESKGHTIVRSSSLVPGNDPTLMFTNSGMVQFKDVFLGTDPRPYSRATTAQR 65
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AI++AWE T + LP ++LW
Sbjct: 66 SVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIRFAWELLTTVYQLPKDKLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYYDF 220
++VY++DDEA++IW KEVGVP E I R+G A DNFW G TGPCGPC+EI+YD
Sbjct: 126 VTVYQEDDEAYDIWAKEVGVPTERIIRIGDNKGARYASDNFWTMGDTGPCGPCTEIFYDH 185
Query: 221 HPD--RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQ 278
PD G D R+IE +NLVFMQ+N+ G++ L ++++DTG+GLER+A +LQ
Sbjct: 186 GPDVWGGPPGSPEEDGDRYIEIWNLVFMQFNRDAQGNMTRLPKQSVDTGMGLERLAAVLQ 245
Query: 279 KVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNI 338
V +NYE DL +IK A+ + +S D TN +LK+I DH+RA +L+ DGV P N
Sbjct: 246 HVHSNYEIDLFQNLIKAAARVTEIS-----DLTNNSLKVIADHIRACSFLIVDGVIPGNE 300
Query: 339 GRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRI 398
GRGYV+RR++RRA+R G LG KG F +A+ E+ ++K EQR+
Sbjct: 301 GRGYVLRRIVRRAIRHGYKLGRKGS-------FFHKLVADLVAEMGAAY-PELKEAEQRV 352
Query: 399 LEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEI 458
+ L++EE RF +T+E G +L+ LAD ++ G V L G+ AF L+DT+GFP+++
Sbjct: 353 TDVLRQEEERFFETIEHGMSILEAALADVEAK---GGKV--LDGELAFKLHDTYGFPLDL 407
Query: 459 TKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTL 518
T +V E G++VD FD M QR Q++AA + L T F GY+ +
Sbjct: 408 TADVCRERGMTVDEPAFDDAMARQREQARAAGK-----FKATQGLEYTGAKTTFHGYEEI 462
Query: 519 S-AKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTA 577
+ A V +L V+G V +V G D V+L+ TPFYAESGGQ+GD G L N T
Sbjct: 463 AFDDAKVVALYVDGSAVNEVKAGQDAVVVLDHTPFYAESGGQVGDQGVL-----ANAATR 517
Query: 578 VVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKK 637
V D K V H GT+ +G L++G + A +D R R + +H+ATHL+ AL++
Sbjct: 518 FA-VADTLKVQADVVGHHGTLEQGTLKIGDVLRAEIDAHRRARTQRNHSATHLMHKALRE 576
Query: 638 VIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDA 697
V+G Q GSLV ++ RFDF + P+ D E+ +E+++N I +VM D+A
Sbjct: 577 VLGAHVQQKGSLVDAEKTRFDFAHNAPMTDDEIRRVEQIVNNEILANAPGIVRVMPYDEA 636
Query: 698 KRAGAIAMFGEKYGEQVKI 716
+ GA+A+FGEKYG++V++
Sbjct: 637 VKGGAMALFGEKYGDEVRV 655
>gi|344998519|ref|YP_004801373.1| alanyl-tRNA synthetase [Streptomyces sp. SirexAA-E]
gi|344314145|gb|AEN08833.1| alanyl-tRNA synthetase [Streptomyces sp. SirexAA-E]
Length = 889
Score = 556 bits (1434), Expect = e-155, Method: Compositional matrix adjust.
Identities = 307/678 (45%), Positives = 428/678 (63%), Gaps = 33/678 (4%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQRC 112
IR+R+L F+ RGH V+PSASL+ +DPT+LL AGM+ FKP FLG+V PR + Q+C
Sbjct: 6 IRRRWLSFFEERGHTVVPSASLIADDPTLLLVPAGMVPFKPYFLGEVKPPAPRVTSVQKC 65
Query: 113 IRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFST--VE---FGLPANRLW 167
+RT D+E VG+T+RH TFF+M GNFSFGDYFK+ AIQ+AWE T VE FGL RLW
Sbjct: 66 VRTPDIEEVGKTTRHGTFFQMCGNFSFGDYFKEGAIQFAWEALTNSVEDGGFGLDPERLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCS 227
I+VY DDDEA +IW +++GVP E I+R+G DNFW+ G GPCGPCSEI YD P+ G
Sbjct: 126 ITVYLDDDEAEQIWREKIGVPAERIQRLGKKDNFWSMGVPGPCGPCSEINYDRGPEFGVE 185
Query: 228 DVDLGDDTRFIEFYNLVFMQYNK-----KDDGS-LEPLKQKNIDTGLGLERIARILQKVP 281
+D R++E +NLVFMQY + KDD L L KNIDTGLGLER+A ILQ V
Sbjct: 186 GGPAVNDERYVEIWNLVFMQYERGAGEGKDDFPILGDLPSKNIDTGLGLERLAMILQGVQ 245
Query: 282 NNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRG 341
N YETD + ++ KA+EL V Y + ++++L+++ DH+R V L+ DGV P N GRG
Sbjct: 246 NMYETDTLRVVMDKATELTGVRYGAEHG-SDVSLRVVADHIRTSVMLIGDGVTPGNEGRG 304
Query: 342 YVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEE 401
YV+RR++RRA+R RLLG G +L + ++ ++ EL T +R+
Sbjct: 305 YVLRRIMRRAIRNMRLLGATGQVVKDLVDVVIDTMGQQYPELVTD--------RKRVETV 356
Query: 402 LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKE 461
EE F++ L+ G +LD A+S T+ +G L+G AFLL+DT+GFP+++T E
Sbjct: 357 ALAEEAAFLKALKGGTNILDT----AVSETKATGG-KVLAGDKAFLLHDTWGFPIDLTLE 411
Query: 462 VAEEHGVSVDMKGFDIEMENQR-RQSQAAHNAVKLSVDDSA--DLAEKIPDTEFLGYDTL 518
+A E G+SVD GF M+ QR R A D SA ++A+ TEF GY +
Sbjct: 412 MAAEQGLSVDEDGFRRLMKEQRERAKADAKAKKTGHADLSAYREVADNSGLTEFTGYTST 471
Query: 519 SAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAV 578
++ + LLV+G P ++G +VEV+L+RTPFYAE GGQ+ D G + + G AV
Sbjct: 472 QGESTIVGLLVDGVPSPAATEGDEVEVVLDRTPFYAEGGGQLADQGRIRLDTG-----AV 526
Query: 579 VEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKV 638
++V+DV++ + V VHKG+++ G + VG V A +D R+ H+ATHL AL+
Sbjct: 527 IQVRDVQQPVPGVSVHKGSVQVGEVTVGSSVLAAIDTTRRRAIARAHSATHLTHQALRDA 586
Query: 639 IGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAK 698
+G +QAGS + R RFDF + T L ++E+ IN + +Q +VM++DDAK
Sbjct: 587 LGPTAAQAGSENSPGRFRFDFGSPAAVPGTVLTDVEQKINEVLARELDVQAEVMSIDDAK 646
Query: 699 RAGAIAMFGEKYGEQVKI 716
+ GAIA FGEKYGE+V++
Sbjct: 647 KQGAIAEFGEKYGERVRV 664
>gi|435854736|ref|YP_007316055.1| alanine--tRNA ligase [Halobacteroides halobius DSM 5150]
gi|433671147|gb|AGB41962.1| alanine--tRNA ligase [Halobacteroides halobius DSM 5150]
Length = 874
Score = 556 bits (1434), Expect = e-155, Method: Compositional matrix adjust.
Identities = 300/674 (44%), Positives = 444/674 (65%), Gaps = 36/674 (5%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+RFLDF+A + HKVLPSA LVP+ DPT+L AGM FK F G R T+Q+
Sbjct: 6 IRQRFLDFFAEQDHKVLPSAPLVPQNDPTLLWINAGMAPFKDYFSGSATPPKRRVVTAQK 65
Query: 112 CIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWISVY 171
CIRTND+ENVG+T+RH TFFEMLGNFSFGDYFK+EAIQW+++F T + L ++R IS+Y
Sbjct: 66 CIRTNDIENVGQTARHQTFFEMLGNFSFGDYFKEEAIQWSYQFLTEKLNLDSDRFLISIY 125
Query: 172 EDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD-VD 230
+DDD+AF IW+K +G+P + I RMG D+NFW G TGPCGPCSEI+YD D GC + +
Sbjct: 126 KDDDDAFNIWHKRIGIPTDRIIRMGKDENFWEIG-TGPCGPCSEIHYDRGKDYGCEEGCE 184
Query: 231 LGDDT-RFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDLI 289
LG D R++E +NLVF QYNK + G L QKNIDTG GLER+A +LQ P N+ETDL
Sbjct: 185 LGCDCDRYLEIWNLVFTQYNKTETGEYLDLPQKNIDTGAGLERLASLLQDKPTNFETDLF 244
Query: 290 FPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLIR 349
PII+ + V Y Q+ + +++ +K+I DH+R++ + ++DGV PSN GRGYVVRRL+R
Sbjct: 245 MPIIEYITSHCGVEYGQAQE-SDVAIKVIADHIRSVSFAITDGVLPSNEGRGYVVRRLLR 303
Query: 350 RAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELRF 409
RAVR ++L +L+ FL +I +E+ + + +++++I + +K+EELRF
Sbjct: 304 RAVRYAKML--------DLKIPFLHTIVAVVVEIMGDHYTALASKQEQIEKIIKQEELRF 355
Query: 410 VQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGVS 469
+TLE+G +L+ ++ D L + +S ++ G+ F LYDT+GFP E+TKE+A E G
Sbjct: 356 QETLEQGMDILEDLI-DELQKKDKS----KIPGKQVFTLYDTYGFPKELTKEIAAEKGFV 410
Query: 470 VDMKGFDIEMENQRRQSQAA-------HNAVKLSVDDSADLAEKIPDTEFLGYDTLSAKA 522
+D GF+ ME QR++++ A H ++L + ++I +T+F+GYD +
Sbjct: 411 IDEIGFEEAMEEQRKRAREAREDYDQGHGQLEL----FKAIRDQIGNTQFVGYDNYQVDS 466
Query: 523 IVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVK 582
V SL+ + + V ++ G +++L +TPFYAE GGQ+GD G + G Q V+E +
Sbjct: 467 KVLSLVQDEEEVKEIGAGQKAKLVLAKTPFYAEGGGQVGDQGMISFASG---QAKVLETE 523
Query: 583 DVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQE 642
++ + VH + EG ++VG +V+A ++ + R+ +HTATHLL ALK+++G
Sbjct: 524 EI----AELIVHHIQLEEGEVKVGTKVKASINQQSRKATARNHTATHLLHKALKEILGDH 579
Query: 643 TSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGA 702
+Q+GSLV D+LRFDF+ + + EL IE+ +N +I ++ + M L++AK GA
Sbjct: 580 VNQSGSLVTPDKLRFDFSHFEAVTEEELAAIEKQVNNYILKNISVKAEKMDLEEAKAVGA 639
Query: 703 IAMFGEKYGEQVKI 716
A+FG+KYGEQV++
Sbjct: 640 TALFGDKYGEQVRL 653
>gi|78066024|ref|YP_368793.1| alanyl-tRNA synthetase [Burkholderia sp. 383]
gi|77966769|gb|ABB08149.1| alanyl-tRNA synthetase [Burkholderia sp. 383]
Length = 897
Score = 556 bits (1434), Expect = e-155, Method: Compositional matrix adjust.
Identities = 301/679 (44%), Positives = 426/679 (62%), Gaps = 44/679 (6%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR++FL F+ S+GH ++ S+SLVP DPT++ T +GM+QFK +FLG PR RA T+QR
Sbjct: 29 IREKFLKFFESKGHTIVRSSSLVPGNDPTLMFTNSGMVQFKDVFLGTDPRPYSRATTAQR 88
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AI++AWE T + LP ++LW
Sbjct: 89 SVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIKFAWELLTTVYQLPKDKLW 148
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYYDF 220
++VY++DDEA++IW KEVGVP E I R+G A DNFW G TGPCGPC+EI+YD
Sbjct: 149 VTVYQEDDEAYDIWAKEVGVPTERIIRIGDNKGARYASDNFWTMGDTGPCGPCTEIFYDH 208
Query: 221 HPD--RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQ 278
PD G D R+IE +NLVFMQ+N+ G++ L ++++DTG+GLER+A +LQ
Sbjct: 209 GPDVWGGPPGSPEEDGDRYIEIWNLVFMQFNRDAQGNMTRLPKQSVDTGMGLERLAAVLQ 268
Query: 279 KVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNI 338
V +NYE DL +IK A+ + +S D TN +LK+I DH+RA +L+ DGV P N
Sbjct: 269 HVHSNYEIDLFQNLIKAAARVTEIS-----DLTNNSLKVIADHIRACSFLIVDGVIPGNE 323
Query: 339 GRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRI 398
GRGYV+RR++RRA+R G LG KG F +A+ E+ ++K EQR+
Sbjct: 324 GRGYVLRRIVRRAIRHGYKLGRKGS-------FFHKLVADLVAEMGVAY-PELKEAEQRV 375
Query: 399 LEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEI 458
+ L++EE RF +T+E G +L+ LAD ++ G V L G+ AF L+DT+GFP+++
Sbjct: 376 TDVLRQEEERFFETIEHGMSILEGALADVEAK---GGKV--LDGELAFKLHDTYGFPLDL 430
Query: 459 TKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTL 518
T +V E G++VD FD M QR Q++AA + L T F GY+ +
Sbjct: 431 TADVCRERGMTVDEPAFDDAMARQREQARAAGK-----FKAAQGLEYTGAKTTFHGYEEI 485
Query: 519 S-AKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTA 577
+ A + +L V+G V +V G D V+L+ TPFYAESGGQ+GD G L N T
Sbjct: 486 AFDDAKIVALYVDGSSVNEVKTGQDAVVVLDHTPFYAESGGQVGDQGVL-----ANAATR 540
Query: 578 VVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKK 637
V D K V H GT+ +G L+VG + A +D R R + +H+ATHL+ AL++
Sbjct: 541 FA-VADTLKVQADVIGHHGTLEQGTLKVGDVLRAEIDAHRRARTQRNHSATHLMHKALRE 599
Query: 638 VIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDA 697
V+G Q GSLV ++ RFDF + P+ D E+ +E+++N I +VM D+A
Sbjct: 600 VLGAHVQQKGSLVDAEKTRFDFAHNAPMTDDEIRRVEQIVNNEILANAPGIVRVMPYDEA 659
Query: 698 KRAGAIAMFGEKYGEQVKI 716
+ GA+A+FGEKYG++V++
Sbjct: 660 VKGGAMALFGEKYGDEVRV 678
>gi|365880395|ref|ZP_09419768.1| alanyl-tRNA synthetase [Bradyrhizobium sp. ORS 375]
gi|365291558|emb|CCD92299.1| alanyl-tRNA synthetase [Bradyrhizobium sp. ORS 375]
Length = 893
Score = 556 bits (1434), Expect = e-155, Method: Compositional matrix adjust.
Identities = 300/678 (44%), Positives = 423/678 (62%), Gaps = 35/678 (5%)
Query: 51 DSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATS 109
+ IR FL+F+A+ GH+++PS+ LVP DPT++ T AGM+QFK +F G R RA TS
Sbjct: 5 NEIRSTFLNFFAANGHEIVPSSPLVPRNDPTLMFTNAGMVQFKNVFTGVEKRPYNRATTS 64
Query: 110 QRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANR 165
Q+C+R ND++NVG T+RHHTFFEMLGNFSFGDYFK+ AI+ AW+ T EFGLP ++
Sbjct: 65 QKCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKENAIELAWKLVTKEFGLPKDK 124
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDR- 224
L +VY DDDEAF +W K G+P I R+ DNFW G TGPCGPCSEI+YD H D+
Sbjct: 125 LTATVYIDDDEAFGLWKKIAGLPESRIIRIAGSDNFWQMGDTGPCGPCSEIFYD-HGDKI 183
Query: 225 --GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPN 282
G D RFIE +NLVFMQY + + G PL + +IDTG GLER+A +LQ +
Sbjct: 184 WGGPPGSPEADGDRFIEIWNLVFMQYEQLEGGVRNPLPKPSIDTGAGLERVAAVLQGKHD 243
Query: 283 NYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGY 342
NY+ DL +I+ ++L N A +L++I DHLRA +L+SDGV PSN GRGY
Sbjct: 244 NYDIDLFVALIRAIADLTN---ADPQGPQKASLRVIADHLRASSFLISDGVLPSNEGRGY 300
Query: 343 VVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEEL 402
V+RR++RRA+R +LLG + L GA + + EL ++A E I E L
Sbjct: 301 VLRRIMRRAMRHAQLLGAREPLMHKLVGALTREMGQAYPEL-------IRA-EGLIKETL 352
Query: 403 KREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEV 462
+ EE RF +TLERG +LD+ A +LS+ G AF LYDT+GFP+++T++
Sbjct: 353 RLEETRFRKTLERGLAILDEKSA-SLSKG------DMFDGDVAFTLYDTYGFPLDLTQDA 405
Query: 463 AEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSA--DLAEKIPDTEFLGYDTLSA 520
+ G+SVD F ME Q+ +++AA + ++ L EK+ TEFLGY+T +A
Sbjct: 406 LKSRGISVDQASFTDAMERQKAKARAAWAGSGEAATETVWFPLREKLGATEFLGYETETA 465
Query: 521 KAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVE 580
+ V +L+ +G V + G ++LN+TPFY ESGGQ+GD G L + V
Sbjct: 466 EGAVTALVKDGAEVDSLKAGESGAIVLNQTPFYGESGGQVGDTGVL------TGEGVRVR 519
Query: 581 VKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIG 640
+ D +K G +F H GT+ +G L++G ++ VD R + +H+ATH+L AL++V+G
Sbjct: 520 ITDTQKKAGDLFAHIGTVEQGTLKLGTPLQLEVDHSRRSAIRANHSATHILHEALRQVLG 579
Query: 641 QETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRA 700
+Q GSLV+ DRLRFDF +P+ EL +E + N + + + T++M LDDA+ A
Sbjct: 580 DHIAQRGSLVSPDRLRFDFVHPKPITAEELARVEDIANDVVLENAEVTTRLMGLDDAREA 639
Query: 701 GAIAMFGEKYGEQVKISS 718
GA A+FGEKYG++V++ S
Sbjct: 640 GARALFGEKYGDEVRVVS 657
>gi|404494065|ref|YP_006718171.1| alanyl-tRNA ligase [Pelobacter carbinolicus DSM 2380]
gi|123756582|sp|Q3A1W0.2|SYA_PELCD RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|114843241|gb|ABA89647.2| alanyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380]
Length = 882
Score = 556 bits (1434), Expect = e-155, Method: Compositional matrix adjust.
Identities = 298/681 (43%), Positives = 418/681 (61%), Gaps = 36/681 (5%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
+G+ IR RFL F+ GH V+PS++L+P DPT+L AGM QFK +FLG+ R RA
Sbjct: 2 TGNEIRSRFLKFFQDHGHTVVPSSALIPHNDPTLLFINAGMNQFKDVFLGREKRDYVRAT 61
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
++Q+C+R ND+ENVG+T+RHHTFFEMLGNFSFGDYFKKEAI AW+F T E GLP
Sbjct: 62 SAQKCVRAGGKHNDLENVGQTARHHTFFEMLGNFSFGDYFKKEAIDHAWKFLTEEMGLPK 121
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPD 223
++LW++V+ +DDEA++IW + G+P E + RMG DNFW+ G TGPCGPCSEI D
Sbjct: 122 DKLWVTVFREDDEAYDIWRDQQGIPEERLIRMGEKDNFWSMGDTGPCGPCSEILIDQGES 181
Query: 224 RGCSD---VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKV 280
C D + D R++E +NLVFMQ+N+ DG++ PL + +IDTG+GLERI ++Q V
Sbjct: 182 MSCGDECGIGKCDCDRYLELWNLVFMQFNRDADGTMTPLPKPSIDTGMGLERITAVMQGV 241
Query: 281 PNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGR 340
+NY+ DL+ II EL+ Y N ++++++I DH RA +L++DGV PSN GR
Sbjct: 242 QSNYDCDLLRGIIAHVEELSGKRYG-DNAEHDMSMRVIADHSRATAFLIADGVLPSNEGR 300
Query: 341 GYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILE 400
GYV+RR++RRA R ++LG L S+AE E + D K
Sbjct: 301 GYVLRRIMRRAARHAKMLGFADPVLYRTATFVLQSMAEAYPEPAQRADYVAKI------- 353
Query: 401 ELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITK 460
+K EE RF+QTL+ G ++ L + + R + + + L G AF LYDTFGFP+++T
Sbjct: 354 -VKIEEERFIQTLDNGLRI----LTEEVERLKAANATV-LPGDVAFKLYDTFGFPLDLTA 407
Query: 461 EVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-----LAEKIPDTEFLGY 515
++ V++D GF+ ME QR Q A K S +++ LAE+ T+F GY
Sbjct: 408 DILRGENVTIDEDGFEACMEEQR---QKAREHWKGSGEEAISGIYRQLAEEGARTDFTGY 464
Query: 516 DTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
L+ ++ + ++L++G+PV G+ VE++ TPFY ESGGQ GD G L
Sbjct: 465 GELTGQSEILAILLDGQPVSSAPAGAKVEIVTAATPFYGESGGQTGDCGTLAAGD----- 519
Query: 576 TAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAAL 635
A V + D KK L +FVH G I G L+ G VD + RQ ++HTATHLLQAAL
Sbjct: 520 -AEVTITDTKKPLPELFVHVGEIAAGTLQTGETATLTVDRERRQATALNHTATHLLQAAL 578
Query: 636 KKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALD 695
+V+G+ QAGSLV +RLRFDF + ELE +E L+N I + + T+ M +
Sbjct: 579 VEVLGEHVKQAGSLVTPERLRFDFIHFSAMSAEELERVETLVNCRIRENAGVDTREMDHE 638
Query: 696 DAKRAGAIAMFGEKYGEQVKI 716
A GA A+FGEKYG++V++
Sbjct: 639 QAVAEGATALFGEKYGDKVRV 659
>gi|254474615|ref|ZP_05088001.1| alanyl-tRNA synthetase [Ruegeria sp. R11]
gi|214028858|gb|EEB69693.1| alanyl-tRNA synthetase [Ruegeria sp. R11]
Length = 883
Score = 556 bits (1434), Expect = e-155, Method: Compositional matrix adjust.
Identities = 310/683 (45%), Positives = 438/683 (64%), Gaps = 47/683 (6%)
Query: 51 DSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATS 109
+ IR FL+++A +GH+V+ S+ LVP DPT++ T +GM+QFK +F G R RA TS
Sbjct: 5 NDIRSTFLNYFAKQGHEVVSSSPLVPRNDPTLMFTNSGMVQFKNLFTGLETRDYTRATTS 64
Query: 110 QRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANR 165
Q+C+R ND++NVG T+RHHTFFEMLGNFSFGDYFK+EAI +AWE T EFG+ ++
Sbjct: 65 QKCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKEEAIPFAWELITKEFGIDKSK 124
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDR- 224
L +VY DDEAFEIW K+VGVP + I R+ DNFW G TGPCGPC+EI+YD H D
Sbjct: 125 LLTTVYHTDDEAFEIW-KKVGVPEDRIIRIDTSDNFWQMGPTGPCGPCTEIFYD-HGDHI 182
Query: 225 -----GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQK 279
G +D D GD RFIE +N+VFMQ + +DGS++ L ++IDTG+GLERI +LQ
Sbjct: 183 WGGPPGSADED-GD--RFIEIWNVVFMQNEQFEDGSMKALDMQSIDTGMGLERIGALLQG 239
Query: 280 VPNNYETDLIFPIIKKASELANVS-YAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNI 338
+NY+TDL +I+ ++++ NV Y N ++ ++I DHLR+ +L+SDGV PSN
Sbjct: 240 SHDNYDTDLFKALIEASADVTNVDPYGDQN----VHHRVIADHLRSTSFLISDGVMPSND 295
Query: 339 GRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRI 398
GRGYV+RR++RRA+R LLG K L A + + EL R Q +
Sbjct: 296 GRGYVLRRIMRRAMRHAHLLGAKDPVMHRLVPALVQQMGAAYPEL---------GRAQSM 346
Query: 399 LEE-LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVE 457
+EE L +EE RF QTL+RG KLL P L G+ AF LYDT+GFP++
Sbjct: 347 IEETLLQEETRFKQTLDRGLKLL------DDELADLDEGAP-LPGEAAFKLYDTYGFPLD 399
Query: 458 ITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSA--DLAEKIPDTEFLGY 515
+T++ E G +VD GFD M Q+ +++AA S D + D+A++ T+FLGY
Sbjct: 400 LTQDALREKGRTVDTDGFDSAMAEQKAKARAAWAGSGESADSTIWFDVADQAGTTDFLGY 459
Query: 516 DTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
+T +A+ V +L+V+G V + G+DV+V+LN+TPFYAESGGQ+GD G + V G
Sbjct: 460 ETEAAEGQVMALVVDGAQVSEAGAGTDVQVVLNQTPFYAESGGQVGDSGEIRVDGG---- 515
Query: 576 TAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAAL 635
VV V D KK+ G VF+H G + G++ G + VD R + +H+ATHLL AL
Sbjct: 516 --VVRVSDTKKAAG-VFIHFGKVESGMITKGAAAQLEVDHARRSAIRSNHSATHLLHEAL 572
Query: 636 KKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALD 695
++V+G+ +Q GSL A DRLRFDF+ ++ L E+ +E+ +N +I + ++T++M D
Sbjct: 573 REVLGEHVAQRGSLNADDRLRFDFSHNKALSLDEIRTVEQQVNHFIRQNSTVETRIMTPD 632
Query: 696 DAKRAGAIAMFGEKYGEQVKISS 718
DA+ GA A+FGEKYG++V++ S
Sbjct: 633 DARALGAQALFGEKYGDEVRVVS 655
>gi|392980372|ref|YP_006478960.1| alanyl-tRNA ligase [Enterobacter cloacae subsp. dissolvens SDM]
gi|392326305|gb|AFM61258.1| alanyl-tRNA ligase [Enterobacter cloacae subsp. dissolvens SDM]
Length = 875
Score = 556 bits (1434), Expect = e-155, Method: Compositional matrix adjust.
Identities = 317/689 (46%), Positives = 434/689 (62%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQYAWELLTGENWFNLPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NYE DL +IK +E+ + D N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYEIDLFSTLIKAVAEVTGAT-----DLNNKSLRVIADHIRSCAFLIADGVIP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRA+R G +LG K L G + + EL K ++
Sbjct: 302 SNENRGYVLRRIIRRAIRHGNMLGAKDTFFYRLVGPLIGVMGSAGDEL--------KRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEHVLKTEEEQFARTLERGLALLDEELAKLKGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQ------AAHNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRARESSGFGADYNAM-IRVDSA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GY+ L V +L V+GK V +S G D V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYEALELTGKVTALFVDGKAVESISAGQDAVVILDKTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G +V + + +++G H G + G L+VG V+A VD R R +++H+ATH
Sbjct: 513 KGNGFSFSVSDTQKYGQAIG----HLGKLVSGSLKVGEGVQANVDEARRARIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G +Q GSLV LRFDF+ + +E+ +E L+N I ++T
Sbjct: 569 LMHAALREVLGTHVAQKGSLVNDKVLRFDFSHFEAMKPSEIRAVEDLVNAQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M LD AK+ GA+A+FGEKY ++V++ S
Sbjct: 629 HIMDLDAAKKKGAMALFGEKYDDRVRVLS 657
>gi|198283180|ref|YP_002219501.1| alanyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 53993]
gi|218667664|ref|YP_002425409.1| alanyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 23270]
gi|198247701|gb|ACH83294.1| alanyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 53993]
gi|218519877|gb|ACK80463.1| alanyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 23270]
Length = 877
Score = 556 bits (1434), Expect = e-155, Method: Compositional matrix adjust.
Identities = 298/675 (44%), Positives = 427/675 (63%), Gaps = 33/675 (4%)
Query: 52 SIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQ 110
+IR+ FL+++ +GH+++PS+ L+P DPT+L T AGM+ FK +FLG R RA +SQ
Sbjct: 5 AIRQAFLEYFVEQGHQIVPSSPLIPRNDPTLLFTNAGMVPFKDVFLGLETRPYRRAVSSQ 64
Query: 111 RCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRL 166
RC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK+E I +AW F T GLP +L
Sbjct: 65 RCMRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKREVIGFAWRFLTERLGLPPEKL 124
Query: 167 WISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGC 226
WI+VYE+DDEA +IW E+G+ + R G DNFW+ G TGPCGPCSEI+YD P
Sbjct: 125 WITVYEEDDEAADIWMNEIGIDPARLSRCGEKDNFWSMGDTGPCGPCSEIFYDHGPHIPG 184
Query: 227 SDVDLG--DDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNY 284
D R+IE +NLVFMQ+++ G+L PL + ++DTG+GLER+A +LQ V NNY
Sbjct: 185 GPPGSPEEDGDRYIEIWNLVFMQFDRDSSGTLTPLPKPSVDTGMGLERLAAVLQGVHNNY 244
Query: 285 ETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVV 344
+TDL P+I A+ ++ +Y S+ T+++L+++ DH+RA +L++DGV P+N GRGYV+
Sbjct: 245 DTDLFKPLIAAAATISGKTYG-SDAATDISLRVLADHIRACSFLITDGVLPANEGRGYVL 303
Query: 345 RRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEE-LK 403
RR+IRRAVR GR LG++ L + + EL+ R QR +E L+
Sbjct: 304 RRIIRRAVRHGRKLGMETVFFHQLVAPLVAEMGSAFPELT---------RAQREVERALE 354
Query: 404 REELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVA 463
REE RF +TLERG LL++ +AD + + G+ F L DTFGFPV++T ++A
Sbjct: 355 REETRFRETLERGLSLLEEAIADLAAGA-------AIPGEIIFRLADTFGFPVDLTADIA 407
Query: 464 EEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSA--DLAEKIPDTEFLGYDTLSAK 521
E + +DM+G++ M QR +S+AA + DLA ++P TEF GY T + +
Sbjct: 408 RERDLIMDMEGYEAAMAEQRSRSRAAWAGSGEVKTERVYHDLAMRLPVTEFTGYSTCADE 467
Query: 522 AIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEV 581
V +L+ +G+ V + G V+L+RTPFY ESGGQ GD G L A+ V
Sbjct: 468 GKVVALIRDGEEVAFLEAGDMGVVILDRTPFYGESGGQAGDRGEL------QSDDALFAV 521
Query: 582 KDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQ 641
D +K +G + VH G + G L VG V A +D R+ HH+ATHLL AAL+ ++G
Sbjct: 522 TDTQKPMGHLHVHLGRMESGRLRVGDMVVASIDEVARRATAAHHSATHLLHAALRNILGS 581
Query: 642 ETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAG 701
Q GSLV +RLRFDF+ P+ +L EIER++N I + +T+++ + +A+ G
Sbjct: 582 HVQQKGSLVNPERLRFDFSQPEPVTAAQLREIERVVNAAIRNNVGAETRILPVAEAQALG 641
Query: 702 AIAMFGEKYGEQVKI 716
A+A+FGEKYG++V++
Sbjct: 642 AMALFGEKYGDEVRV 656
>gi|297198338|ref|ZP_06915735.1| alanyl-tRNA synthetase [Streptomyces sviceus ATCC 29083]
gi|197714390|gb|EDY58424.1| alanyl-tRNA synthetase [Streptomyces sviceus ATCC 29083]
Length = 890
Score = 556 bits (1434), Expect = e-155, Method: Compositional matrix adjust.
Identities = 299/678 (44%), Positives = 429/678 (63%), Gaps = 33/678 (4%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQRC 112
IR+R+L F+ RGH V+PSASL+ +DPT+LL AGM+ FKP FLG+V RA + Q+C
Sbjct: 6 IRRRWLSFFEERGHTVVPSASLIADDPTLLLVPAGMVPFKPYFLGEVKPPFDRATSVQKC 65
Query: 113 IRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE-----FGLPANRLW 167
+RT D+E VG+T+RH TFF+M GNFSFGDYFK+ AI++AWE T +GL A+RLW
Sbjct: 66 VRTPDIEEVGKTTRHGTFFQMCGNFSFGDYFKEGAIKYAWELLTSPQDKGGYGLEADRLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCS 227
I+VY+DDDEA IW++ VGVP E I+R+G DN+W+ G GPCGPCSEI YD P+ G
Sbjct: 126 ITVYKDDDEAERIWHEVVGVPKERIQRLGMKDNYWSMGVPGPCGPCSEINYDRGPEFGVE 185
Query: 228 DVDLGDDTRFIEFYNLVFMQYNK-----KDDGS-LEPLKQKNIDTGLGLERIARILQKVP 281
+D R++E +NLVFMQY + KD+ L L KNIDTGLGLER+A ILQ V
Sbjct: 186 GGPAVNDERYVEIWNLVFMQYERGEGIGKDNFEILGELPSKNIDTGLGLERLAMILQGVQ 245
Query: 282 NNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRG 341
N YE D +IKKA+EL V+Y ++D ++++L+++ DH+R V L+ DGV P N GRG
Sbjct: 246 NMYEIDTSMAVIKKATELTGVAYGDAHD-SDVSLRVVTDHMRTSVMLIGDGVTPGNEGRG 304
Query: 342 YVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEE 401
YV+RR++RRA+R RLLG G +L + + ++ EL T +RI +
Sbjct: 305 YVLRRIMRRAIRNMRLLGATGPVVLDLVDTVIAMMGQQYPELVTD--------RERIEKV 356
Query: 402 LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKE 461
EE F++TL+ G +LD A++ T+ +G L+G AFLL+DT+GFP+++T E
Sbjct: 357 AVAEENAFLKTLKAGTNILDT----AVTETKAAGG-KVLAGDKAFLLHDTWGFPIDLTLE 411
Query: 462 VAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSA---DLAEKIPDTEFLGYDTL 518
+A E G+SVD GF M+ QR +++A K + +A++ +TEFLGY
Sbjct: 412 MAAEQGLSVDEDGFRRLMKEQRERAKADAQGKKTGHAGAGAYRAIADQAGETEFLGYSDT 471
Query: 519 SAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAV 578
+++ + +LV+G ++G +VE++L+RTPFYAE GGQIGD G + V G AV
Sbjct: 472 ESESTIVGILVDGASSPAATEGDEVEIVLDRTPFYAEGGGQIGDTGRIKVDSG-----AV 526
Query: 579 VEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKV 638
+E++D +K + V+VHKG ++ G + VG + A +D + R H+ATHL AL+
Sbjct: 527 IEIRDCQKPVPGVYVHKGVVQFGEVTVGAKAHAAIDNRRRTAIARAHSATHLTHQALRDA 586
Query: 639 IGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAK 698
+G +QAGS R RFDF + + ++E+ IN + ++ VM +D+AK
Sbjct: 587 LGPTAAQAGSENQPGRFRFDFGSPSAVPTAVMTDVEQKINEVLARDLDVRADVMGIDEAK 646
Query: 699 RAGAIAMFGEKYGEQVKI 716
+ GAIA FGEKYGE+V++
Sbjct: 647 KQGAIAEFGEKYGERVRV 664
>gi|389720809|ref|ZP_10187619.1| alanyl-tRNA ligase [Acinetobacter sp. HA]
gi|388609339|gb|EIM38520.1| alanyl-tRNA ligase [Acinetobacter sp. HA]
Length = 892
Score = 556 bits (1434), Expect = e-155, Method: Compositional matrix adjust.
Identities = 306/692 (44%), Positives = 436/692 (63%), Gaps = 54/692 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FL ++ S+GH + S+SLVP DPT+L T AGM QFK FLG R RA +SQ+
Sbjct: 6 IREAFLSYFESQGHTRVASSSLVPANDPTLLFTNAGMNQFKDCFLGLEKRDYVRATSSQK 65
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND++NVG T+RHHTFFEMLGNFSFGDYFK++AI++AW+F T E GLP ++
Sbjct: 66 CVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKRDAIKFAWDFLTSEQWLGLPKDK 125
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
L+ +VY DDEAFEIWNKE+G+ I R+G A DNFW G TGPCGPCSEI+Y
Sbjct: 126 LYATVYHTDDEAFEIWNKEIGLDASRIIRIGDNKGGQYASDNFWAMGDTGPCGPCSEIFY 185
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D RFIE +N VFMQ+N+ DG L PL ++DTG+GLERI+
Sbjct: 186 D-HGDHIWGGLPGTPEEDGDRFIEIWNNVFMQFNRTADGVLHPLPAPSVDTGMGLERISA 244
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNL---------NLKIIGDHLRAIV 326
+LQ V +NYE DL ++K A+E+ + A+ + +LK++ DH R+
Sbjct: 245 VLQHVNSNYEIDLFQHLLKAAAEIIGLDTAELEAKAQAEGKPVEYPASLKVVADHARSCS 304
Query: 327 YLLSDGVFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTH 386
+L++DGV PSN GRGYV+RR+IRRAVR G LG G +F + + IE+
Sbjct: 305 FLIADGVNPSNEGRGYVLRRIIRRAVRHGNKLGATG--------SFFHKMLKPLIEVMGA 356
Query: 387 IDSDVKAREQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAF 446
++ A + RI +L +EE +F +TLE+G KLL+ LA+ GSV + G+ F
Sbjct: 357 AYPELAANQARIEAQLLKEEEQFAKTLEQGLKLLEGELANL------KGSV--IPGEVVF 408
Query: 447 LLYDTFGFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEK 506
LYDT+GFP ++T ++A E +++D GF+ EM QR Q A +A K ++D ++ + +
Sbjct: 409 KLYDTYGFPTDLTADIARERDLTIDEAGFETEMAAQR---QRARDAGKFAIDYNS-VVKV 464
Query: 507 IPDTEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFL 566
+T+F GYD + + + ++ +G+ V +V +G + ++LN+TPFYAESGGQIGD G
Sbjct: 465 EGETQFEGYDATAGEGQIIAIYKDGEQVDEVVEGDEALIVLNQTPFYAESGGQIGDTGIF 524
Query: 567 YVTQGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHT 626
T + EV+D KKS G FVH+G + G L+V + VEA V +R +H+
Sbjct: 525 ------KNDTGIFEVQDTKKS-GGAFVHQGIVTMGNLKVTQNVEATVKADIRAATARNHS 577
Query: 627 ATHLLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANL 686
ATHLL AAL++++G+ Q GSLVA D LRFDF +P+ +L+EIERL+N +
Sbjct: 578 ATHLLHAALRQILGEHVQQKGSLVASDVLRFDFANDQPVTFEQLQEIERLVNAEVIANTP 637
Query: 687 LQTKVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+ T+++ ++ AK GA+ +FGEKYG++V++ S
Sbjct: 638 VTTELLDIESAKAKGAMMLFGEKYGDEVRVLS 669
>gi|261342139|ref|ZP_05969997.1| alanine--tRNA ligase [Enterobacter cancerogenus ATCC 35316]
gi|288315472|gb|EFC54410.1| alanine--tRNA ligase [Enterobacter cancerogenus ATCC 35316]
Length = 875
Score = 556 bits (1434), Expect = e-155, Method: Compositional matrix adjust.
Identities = 319/692 (46%), Positives = 440/692 (63%), Gaps = 68/692 (9%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQYAWELLTGENWFNLPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEAF+IW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYETDDEAFDIWEKEVGIPRERIIRIGDNKGAPFASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR------GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLER 272
D H D G ++ D GD R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLER
Sbjct: 188 D-HGDHIWGGPPGSAEED-GD--RYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLER 243
Query: 273 IARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDG 332
IA +LQ V +NYE DL +IK +E+ + D N +L++I DH+R+ +L++DG
Sbjct: 244 IAAVLQHVNSNYEIDLFSTLIKAVAEVTGAT-----DLNNKSLRVIADHIRSCAFLIADG 298
Query: 333 VFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVK 392
V PSN RGYV+RR+IRRA+R G +LG K L G + + EL K
Sbjct: 299 VIPSNENRGYVLRRIIRRAIRHGNMLGAKDTFFYKLVGPLIGVMGSAGDEL--------K 350
Query: 393 AREQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTF 452
++ ++ + LK EE +F +TLERG LLD D LS+ + L G+ AF LYDT+
Sbjct: 351 RQQAQVEQVLKTEEEQFARTLERGLALLD----DELSKLKGD----TLDGETAFRLYDTY 402
Query: 453 GFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQ------AAHNAVKLSVDDSADLAEK 506
GFPV++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 403 GFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARESSGFGADYNAM-IRVDSA------ 455
Query: 507 IPDTEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFL 566
+EF GYD L V +L V+GK V +S G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 ---SEFKGYDALELTGNVTALFVDGKAVDSISAGQEAVVILDKTPFYAESGGQVGDKGEL 512
Query: 567 YVTQGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHT 626
+G +V + + +++G H+G + G L+VG V+A VD R R +++H+
Sbjct: 513 ---KGNGFSFSVSDTQKYGQAIG----HQGKLVSGSLKVGEGVQANVDEARRARIRLNHS 565
Query: 627 ATHLLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANL 686
ATHL+ AAL++V+G +Q GSLV LRFDF+ + +E+ +E L+N I
Sbjct: 566 ATHLMHAALREVLGTHVAQKGSLVNDKVLRFDFSHFEAMKPSEIRAVEDLVNAQIRRNLP 625
Query: 687 LQTKVMALDDAKRAGAIAMFGEKYGEQVKISS 718
++T +M L+ AK GA+A+FGEKY E+V++ S
Sbjct: 626 IETNIMDLEAAKNKGAMALFGEKYDERVRVLS 657
>gi|372271413|ref|ZP_09507461.1| alanyl-tRNA synthetase [Marinobacterium stanieri S30]
Length = 864
Score = 556 bits (1434), Expect = e-155, Method: Compositional matrix adjust.
Identities = 305/679 (44%), Positives = 430/679 (63%), Gaps = 52/679 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ +GH+++ S+ L+P DPT+L T AGM+QFK +FLG R RA TSQR
Sbjct: 6 IRQAFLDFFNQQGHEIVASSPLIPGNDPTLLFTNAGMVQFKDVFLGSDKRSYSRATTSQR 65
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK+EAI++AW+F T GLP RLW
Sbjct: 66 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKREAIKFAWDFLTKRLGLPEERLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPD---- 223
++V+ DDEA +IW +E+G+ E ++ +DNFW G TGPCGPC+EI++D PD
Sbjct: 126 VTVHYTDDEAEKIWKEEMGINPERFSKLD-EDNFWAMGDTGPCGPCTEIFFDHGPDVAGG 184
Query: 224 -RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPN 282
G D D GD R+IE +NLVFMQYN+ DG +EPL + +IDTG+GLER+A +LQ V +
Sbjct: 185 PPGSPDED-GD--RYIEIWNLVFMQYNRSADGHMEPLARPSIDTGMGLERVAAVLQGVHS 241
Query: 283 NYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGY 342
NYE DL ++K + + + S +L++I DH+R+ +L++DGV PSN GRGY
Sbjct: 242 NYEIDLFQNLLKATAGVLGLDNIDSK-----SLRVIADHIRSCSFLITDGVMPSNEGRGY 296
Query: 343 VVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEEL 402
V+RR++RRA+R G LG K L + + E EL+ K +EQ + L
Sbjct: 297 VLRRIMRRAIRHGNKLGAKEPFFHKLVAPLVKEMGEAYPELA-------KMQEQ-VERIL 348
Query: 403 KREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEV 462
+EE +F +TL+ G +LL+Q +AD +T + G+ F LYDT+GFPV++T +V
Sbjct: 349 LKEEQQFAKTLDHGMQLLEQAIADLDGKT--------IPGETVFRLYDTYGFPVDLTADV 400
Query: 463 AEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIP---DTEFLGYDTLS 519
A EH +S+DM GF+ ME QR++++A+ S D E+I TEF GYD+L
Sbjct: 401 AREHELSLDMDGFESAMEAQRQRARASGQF-------SVDYNEQIKLDGSTEFNGYDSLE 453
Query: 520 AKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVV 579
++ V +L G+ V ++S G V+L T FYAESGGQ+GD G L +G
Sbjct: 454 DRSEVIALFREGEEVQQLSAGEHGVVVLKNTAFYAESGGQVGDQGVLRWDRGQ------F 507
Query: 580 EVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVI 639
+V D K G +H G++ EGVL+VG +V VD RQ ++H+ATHLL AAL+ V+
Sbjct: 508 DVSDCTKESGH-HLHHGSLSEGVLQVGDQVVTEVDMAKRQATALNHSATHLLHAALRTVL 566
Query: 640 GQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKR 699
G Q GSLV +RLRFDF + E+ ++ER++N I + ++T++M LD AK
Sbjct: 567 GDHVQQKGSLVDAERLRFDFAHFEAMSADEIAQVERMVNDQIRANSAVETELMELDAAKE 626
Query: 700 AGAIAMFGEKYGEQVKISS 718
GA+A+FGEKY ++V++ S
Sbjct: 627 KGAMALFGEKYDDEVRVLS 645
>gi|302871868|ref|YP_003840504.1| alanyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
gi|302574727|gb|ADL42518.1| alanyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
Length = 881
Score = 556 bits (1434), Expect = e-155, Method: Compositional matrix adjust.
Identities = 302/675 (44%), Positives = 432/675 (64%), Gaps = 30/675 (4%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLG--KVPRQVPR 105
S D IR++FL F+ S+GH LPS SL+P+ D ++LL AGM KP FLG + PR+ R
Sbjct: 4 STDEIREKFLQFFESKGHLRLPSFSLIPKNDKSLLLINAGMAPLKPYFLGIEEPPRR--R 61
Query: 106 AATSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANR 165
T Q+CIRT D++ VG+T+RH TFFEMLGNFSFGDYFK+EAI WAWEF T LP R
Sbjct: 62 ITTCQKCIRTPDIDRVGKTARHATFFEMLGNFSFGDYFKREAIIWAWEFVTEVLKLPRER 121
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRG 225
LW+++YE+DDEAFEIW+KEVG+ + IKRMG +DNFW G TGPCGPCSEIY+D D+G
Sbjct: 122 LWVTIYEEDDEAFEIWHKEVGLEPQRIKRMGKEDNFWEIG-TGPCGPCSEIYFDRGEDKG 180
Query: 226 CSDVDLG---DDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPN 282
C G D RF+EF+NLVF Q++K ++G LK NIDTG+GLERIA I+Q+V +
Sbjct: 181 CGKPTCGIGCDCDRFVEFWNLVFTQFDKDENGVYHRLKNPNIDTGMGLERIAAIMQEVDS 240
Query: 283 NYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGY 342
++ D++ I K E+ N Y + N ++++++I DH+R IV+++ DG+ PSN GRGY
Sbjct: 241 LFDIDIVKAIRNKVCEVTNYEYGK-NAEKDVSVRVITDHIRGIVFMIGDGILPSNEGRGY 299
Query: 343 VVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEEL 402
V+RRLIRRA R GR+LG K AFL I + IE + ++ + + I + L
Sbjct: 300 VLRRLIRRASRHGRMLGKK--------EAFLHLIVDTVIESYKNPYPELVQKAEYIKKVL 351
Query: 403 KREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEV 462
EE RF QT++ G ++L+ + + L + +E+ L+G+ AF +YDT+GFP+++TKE+
Sbjct: 352 YNEESRFNQTIDVGLEILENEI-EKLKKNKET----ILNGEIAFKMYDTYGFPLDLTKEI 406
Query: 463 AEEHGVSVDMKGFDIEMENQRRQSQAAHNAVK-LSVDDSADLAEKIPDTEFLGYDTLSAK 521
A E G+ VD + FD M+ Q+ +++AA ++ D + E+ +T F+GY+TL +
Sbjct: 407 AAEKGIIVDQERFDELMQQQKERARAAQKELENAGWKDINIVIEEDIETVFVGYETLKQE 466
Query: 522 AIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEV 581
+ + + + + V + V+L++TPFYAESGGQ+ D G L + + EV
Sbjct: 467 SKILKIFMEDEEVAYAKEEDVCFVILDKTPFYAESGGQVADKGIL------EGEGVLAEV 520
Query: 582 KDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQ 641
DVKK +HK + +G + V V A VD LR +HTATHLL +AL+K++GQ
Sbjct: 521 LDVKKGPKGTILHKVKVLKGEISVLSSVIAKVDEGLRFATMKNHTATHLLHSALRKILGQ 580
Query: 642 ETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAG 701
Q+GS V+ DRLRFDF + PL + ++ EIE+++N I A ++ V LD A R G
Sbjct: 581 HAQQSGSQVSADRLRFDFAHYEPLSEEQIIEIEKMVNNVIQQAIPVEKIVTDLDSALRMG 640
Query: 702 AIAMFGEKYGEQVKI 716
A A+F EKY V++
Sbjct: 641 ATALFDEKYSNVVRV 655
>gi|425746342|ref|ZP_18864372.1| alanine--tRNA ligase [Acinetobacter baumannii WC-323]
gi|425486219|gb|EKU52591.1| alanine--tRNA ligase [Acinetobacter baumannii WC-323]
Length = 896
Score = 556 bits (1434), Expect = e-155, Method: Compositional matrix adjust.
Identities = 308/702 (43%), Positives = 445/702 (63%), Gaps = 55/702 (7%)
Query: 43 SQDFPSSGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPR 101
S F +S + IR+ FL ++ S+GH + S+SLVP DPT+L T AGM QFK FLG R
Sbjct: 2 STRFMTSAE-IREAFLRYFESQGHTRVASSSLVPANDPTLLFTNAGMNQFKDCFLGLEKR 60
Query: 102 QVPRAATSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTV 157
RA +SQ+C+R ND++NVG T+RHHTFFEMLGNFSFGDYFK+ A+++AWEF T
Sbjct: 61 DYVRAVSSQKCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKQNALKFAWEFLTS 120
Query: 158 E--FGLPANRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATG 208
E GLP +RL+++VY DDEAF+IWNKE+G+ + I R+G A DNFW G TG
Sbjct: 121 EQWLGLPKDRLYVTVYHTDDEAFDIWNKEIGLDADRIIRIGDNKGGQYASDNFWAMGDTG 180
Query: 209 PCGPCSEIYYDFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNID 265
PCGPCSEI+YD H D G D RFIE +N VFMQ+N+ DG + PL ++D
Sbjct: 181 PCGPCSEIFYD-HGDHIWGGLPGSPEEDGDRFIEIWNNVFMQFNRTADGVMHPLPAPSVD 239
Query: 266 TGLGLERIARILQKVPNNYETDLIFPIIKKASELANV------SYAQSNDRT---NLNLK 316
TG+GLERI+ +LQ V +NYE DL ++K A+E+ + + A++ ++ +LK
Sbjct: 240 TGMGLERISAVLQHVNSNYEIDLFQHLLKAAAEIIGLDTTAIEAEAKAQNKPVEYPASLK 299
Query: 317 IIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSI 376
+I DH R+ +L++DGV PSN GRGYV+RR+IRRAVR G LG G +F +
Sbjct: 300 VIADHARSCSFLIADGVNPSNEGRGYVLRRIIRRAVRHGNKLGATG--------SFFYKM 351
Query: 377 AEKAIELSTHIDSDVKAREQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGS 436
+ IE+ ++ A++ RI +L +EE +F +TLE+G KLL+ LA + G+
Sbjct: 352 LQPLIEVMGDAYPELAAQQARIEAQLLKEEEQFAKTLEQGLKLLEGELA------QLKGN 405
Query: 437 VPRLSGQDAFLLYDTFGFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLS 496
V + G+ F LYDT+GFP ++T ++A E +++D GF++EM QR Q A +A K +
Sbjct: 406 V--IPGETVFKLYDTYGFPTDLTADIARERDLTIDEAGFEVEMAAQR---QRARDAGKFA 460
Query: 497 VDDSADLAEKIPDTEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAES 556
VD ++ + + +T+F GYD + + ++ +G V ++++G + ++LN+TPFYAES
Sbjct: 461 VDYNS-IVKVEGETQFDGYDATQGQGQIVAIYKDGVQVDEINEGDEALIVLNQTPFYAES 519
Query: 557 GGQIGDYGFLYVTQGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPK 616
GGQIGD G T + EV+D KKS G FVH+G + G L+ + VEA V
Sbjct: 520 GGQIGDTGIF------KNDTGIFEVQDTKKS-GGAFVHQGIVTMGSLKAAQNVEATVKAD 572
Query: 617 LRQRAKVHHTATHLLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERL 676
+R +H+ATHLL AAL++++G+ Q GSLVA D LRFDF +P+ +L++IERL
Sbjct: 573 IRAATARNHSATHLLHAALRQILGEHVQQKGSLVASDVLRFDFANDQPVSFEQLQQIERL 632
Query: 677 INGWIGDANLLQTKVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+N + + T+++ +D AK GA+ +FGEKYGE+V++ S
Sbjct: 633 VNAEVIANTAVTTELLDIDTAKAKGAMMLFGEKYGEEVRVLS 674
>gi|332305691|ref|YP_004433542.1| alanyl-tRNA synthetase [Glaciecola sp. 4H-3-7+YE-5]
gi|410642570|ref|ZP_11353080.1| alanyl-tRNA synthetase [Glaciecola chathamensis S18K6]
gi|332173020|gb|AEE22274.1| alanyl-tRNA synthetase [Glaciecola sp. 4H-3-7+YE-5]
gi|410137867|dbj|GAC11267.1| alanyl-tRNA synthetase [Glaciecola chathamensis S18K6]
Length = 865
Score = 556 bits (1434), Expect = e-155, Method: Compositional matrix adjust.
Identities = 306/675 (45%), Positives = 431/675 (63%), Gaps = 44/675 (6%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FL+F+A +GH+ + S+SLVP +DPT+L T AGM QFK +FLG R+ RA +SQR
Sbjct: 8 IRQAFLNFFADKGHQKVSSSSLVPSDDPTLLFTNAGMNQFKDVFLGTEQRKYTRATSSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI +AW F T E LP +L
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQQAIAYAWTFLTQELKLPKEKLL 127
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDF--HPDRG 225
+++Y +DDEAF+IW+ E+GVP E I R+ DNFW+ G TGPCGPCSEI+YD H G
Sbjct: 128 VTIYSEDDEAFDIWHNEIGVPKEKIIRIATSDNFWSMGDTGPCGPCSEIFYDHGEHIWGG 187
Query: 226 CSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYE 285
D RFIE +NLVFMQ+N++ +G + PL + +IDTG+GLERI+ ILQ V +NYE
Sbjct: 188 PPGTPEEDGDRFIEIWNLVFMQFNRQANGDMLPLPKPSIDTGMGLERISAILQNVHSNYE 247
Query: 286 TDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVR 345
D+ +IK +E+ S + +L+++ DH+R+ +L+SDGV PSN GRGYV+R
Sbjct: 248 IDIFQNLIKATAEIVGTSSLEDK-----SLRVVADHIRSCSFLISDGVMPSNEGRGYVLR 302
Query: 346 RLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEE--LK 403
R+IRRAVR G LG KG F +A A E+ D+ + EQR + E L+
Sbjct: 303 RIIRRAVRHGNKLGAKGV-------FFYKLVAALATEMG---DAYPELNEQRAVIEKVLR 352
Query: 404 REELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVA 463
EE +F +TLERG +L+ DALS E VP G+ F LYDT+GFP ++T +VA
Sbjct: 353 VEEEQFSRTLERGMLILN----DALSEL-EGKVVP---GELVFKLYDTYGFPADLTNDVA 404
Query: 464 EEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTLSAKAI 523
E G+S+D +GF+ M QR+++Q A N +D + L + ++ F+GY+ A
Sbjct: 405 REKGLSIDEEGFEQAMAEQRKRAQKASN---FDLDYNEQLRSDL-ESVFVGYELEQNTAQ 460
Query: 524 VESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKD 583
++ + V G+ V +++ G + ++L+ +PFYAE+GGQ GD G L G EV+D
Sbjct: 461 IKEIFVQGQSVAEIAAGMEGTIILDESPFYAEAGGQAGDTGTLVKDSGG------FEVQD 514
Query: 584 VKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQET 643
K LG HKG L+VG V+A V+ R K++H+ATHL+ AALK V+G+
Sbjct: 515 TVK-LGKAIAHKGAALS-ELKVGDSVQANVNGARRHAIKLNHSATHLMHAALKSVLGEHV 572
Query: 644 SQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAI 703
+Q GSLV +RLRFDF+ + + ++ +E ++N I + LQTK+M L+ AK AGA+
Sbjct: 573 NQKGSLVQPERLRFDFSHYEAMTKEQVLAVETMVNEQILANHALQTKLMGLEQAKEAGAM 632
Query: 704 AMFGEKYGEQVKISS 718
A+FGEKY + V++ S
Sbjct: 633 ALFGEKYDDDVRVVS 647
>gi|424794842|ref|ZP_18220766.1| Alanyl-tRNA synthetase [Xanthomonas translucens pv. graminis
ART-Xtg29]
gi|422795745|gb|EKU24378.1| Alanyl-tRNA synthetase [Xanthomonas translucens pv. graminis
ART-Xtg29]
Length = 882
Score = 556 bits (1433), Expect = e-155, Method: Compositional matrix adjust.
Identities = 313/683 (45%), Positives = 424/683 (62%), Gaps = 44/683 (6%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S IR FL+F+ +GH ++PSA LVP DPT+L T +GM+QFK +FLG R RAA
Sbjct: 8 STSQIRSDFLEFFNGKGHTIVPSAPLVPGNDPTLLFTNSGMVQFKDVFLGAEKRSYVRAA 67
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
QRC+R ND++ VG T+RHHTFFEMLGN+SFGDYFKKEAI WAWE T + LPA
Sbjct: 68 DVQRCLRAGGKHNDLDAVGYTARHHTFFEMLGNWSFGDYFKKEAIAWAWELLTQVWKLPA 127
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEI 216
RL ++VY D++A+E+W +GVP E I R+G A DNFW TGPCGPC+EI
Sbjct: 128 ERLLVTVYHTDEQAYELWRDMIGVPPERIVRIGDNKGAAYASDNFWQMADTGPCGPCTEI 187
Query: 217 YYDF--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIA 274
+YD H G D RFIE +NLVFMQ++++ DG+L PL +DTG+GLER+A
Sbjct: 188 FYDHGAHIAGGPPGSPDEDGDRFIEIWNLVFMQFDRQPDGTLVPLPAPCVDTGMGLERLA 247
Query: 275 RILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVF 334
ILQ V +NYE DL +I+ ASEL ++ D N +L++I DH+RA +L+ DGV
Sbjct: 248 AILQHVHSNYEIDLFQTLIRHASELTGMA-----DLENKSLRVIADHIRACAFLIVDGVL 302
Query: 335 PSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAR 394
PSN GRGYV+RR+IRRA+R G +LG++ F +A EL ++ A
Sbjct: 303 PSNEGRGYVLRRIIRRALRHGWMLGVR--------QPFFHKMAATLSELMGEAYPELPAA 354
Query: 395 EQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGF 454
+ L+ EE RF +TL+ G K+ D++ A R SGS+P G DAF LYDT+GF
Sbjct: 355 LPTVQRALQAEEERFAETLDSGMKIFDEIAA------RASGSIP---GADAFRLYDTYGF 405
Query: 455 PVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLG 514
PV++T ++A E G+ VDM GF+ ME QR ++AA ADL ++ T FLG
Sbjct: 406 PVDLTADIARERGMDVDMAGFESAMERQRETARAA-GKFGGGTTLPADLVAQLVPTVFLG 464
Query: 515 YDTLSAKAI-VESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTN 573
YD L A A+ V +LL +G+PV + G VLL+RTPFYAESGGQ+GD G L +
Sbjct: 465 YDALQADALKVVALLKDGRPVESIEAGDAAIVLLDRTPFYAESGGQVGDLGQL------S 518
Query: 574 QQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQA 633
+ +V++ +K G H G +R G L+VG + A VD R ++H+ATHLL A
Sbjct: 519 ADCVLFQVEETQKFAGQFHGHVGQLRSGRLQVGATLSAQVDSARRGATILNHSATHLLHA 578
Query: 634 ALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMA 693
AL++V+G Q GSLVA DRLRFDF+ +P+ EL +ER +N + + ++ M
Sbjct: 579 ALREVLGTHVQQKGSLVAPDRLRFDFSHFQPMSAAELAVVERKVNAQVRANHAVEVHHMG 638
Query: 694 LDDAKRAGAIAMFGEKYGEQVKI 716
+ +A GA+A+FGEKYGE+V++
Sbjct: 639 MQEALDFGAMALFGEKYGERVRV 661
>gi|119774185|ref|YP_926925.1| alanyl-tRNA synthetase [Shewanella amazonensis SB2B]
gi|119766685|gb|ABL99255.1| alanyl-tRNA synthetase [Shewanella amazonensis SB2B]
Length = 900
Score = 556 bits (1433), Expect = e-155, Method: Compositional matrix adjust.
Identities = 309/680 (45%), Positives = 430/680 (63%), Gaps = 48/680 (7%)
Query: 52 SIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQ 110
++R FL+++ +GH+V+ S+SLVP DPT+L T AGM QFK FLG R RAAT+Q
Sbjct: 34 ALRSAFLEYFRQQGHQVVDSSSLVPGNDPTLLFTNAGMNQFKDCFLGMEKRSYVRAATAQ 93
Query: 111 RCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRL 166
RC+R ND++NVG T+RHHTFFEMLGNFSFGDYFK++AI++AWEF T LP +L
Sbjct: 94 RCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKEDAIRFAWEFLTGTLKLPKEKL 153
Query: 167 WISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYYD 219
++VY DDEAF+IWNK++GVP E+I R+G A DNFW G TGPCGPC+EI+YD
Sbjct: 154 CVTVYHTDDEAFDIWNKQIGVPAENIIRIGDNKGAPFASDNFWQMGDTGPCGPCTEIFYD 213
Query: 220 F--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARIL 277
H G D RFIE +N+VFMQYN++ DG+L+PL + +DTG+G+ERI+ I+
Sbjct: 214 HGEHIWGGRPGSPEEDGDRFIEIWNIVFMQYNRQSDGTLDPLPKPAVDTGMGIERISAIM 273
Query: 278 QKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSN 337
Q V +NYE D+ +I KA+E+ VS D N +L++I DH+R+ +L++DGV PSN
Sbjct: 274 QGVHSNYEIDIFQKLIAKAAEIIGVS-----DLENKSLRVIADHIRSCAFLVADGVMPSN 328
Query: 338 IGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQR 397
GRGYV+RR+IRRAVR G LG F + IE ++KA +
Sbjct: 329 EGRGYVLRRIIRRAVRHGNKLGAT--------DTFFYKLVPTLIEAMGDAAKELKATQTI 380
Query: 398 ILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVE 457
+ + LK EE +F +TLERG +LD LAD T L G+ F LYDT+GFPV+
Sbjct: 381 VEKALKAEEEQFARTLERGLGMLDAALADLKGDT--------LDGETVFKLYDTYGFPVD 432
Query: 458 ITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKI-PDTEFLGYD 516
+T +V E + VD +GF+ M QR ++QAA + S D +A L KI T+F GY
Sbjct: 433 LTADVCRERNLKVDEEGFNAAMAEQRSRAQAAG---QFSADYNAAL--KIDTATDFCGYT 487
Query: 517 TLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQT 576
L+A++ V +L +G+ V G+ + V+L+ TPFYAESGGQ+GD G L + +G
Sbjct: 488 ELAAESKVVALYRDGESVDAAEAGAVLVVVLDNTPFYAESGGQVGDKGQL-LAEGVE--- 543
Query: 577 AVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALK 636
V D +K G HKG + G ++VG ++A+VD KLR R +++H+ THLL AAL+
Sbjct: 544 --FNVADTQK-FGQGIGHKGQLALGSIKVGDSLKAMVDKKLRHRTELNHSVTHLLHAALR 600
Query: 637 KVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDD 696
+V+G +Q GSLV +RLRFDF+ + EL+ +E L+N I + L M +++
Sbjct: 601 QVLGTHVTQKGSLVDPERLRFDFSHFEGVKREELKAVEDLVNTQIRRNHELNFAEMDIEE 660
Query: 697 AKRAGAIAMFGEKYGEQVKI 716
AK GA+A+FGEKY +V++
Sbjct: 661 AKAKGAMALFGEKYDSKVRV 680
>gi|300718056|ref|YP_003742859.1| alanyl-tRNA synthetase [Erwinia billingiae Eb661]
gi|299063892|emb|CAX61012.1| Alanyl-tRNA synthetase [Erwinia billingiae Eb661]
Length = 875
Score = 556 bits (1433), Expect = e-155, Method: Compositional matrix adjust.
Identities = 302/683 (44%), Positives = 417/683 (61%), Gaps = 50/683 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG+ R RA TSQR
Sbjct: 8 IRQAFLDFFQSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGQDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK+EAI +AWE T F LP +
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKREAIGFAWELLTGAQWFNLPKEK 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEAF+IW KEVGVP E I R+G A DNFW G TGPCGPCSEI++
Sbjct: 128 LWVTVYETDDEAFDIWEKEVGVPRERIIRIGDNKGGAYASDNFWQMGDTGPCGPCSEIFF 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D RFIE +N+VFMQ+N++ DG++ PL + ++DTG+GLERI
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRFIEIWNIVFMQFNRQPDGTMLPLPKPSVDTGMGLERITA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NYE DL +I +E+ + D T+ +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYEIDLFARLIASVAEVTGAT-----DLTSKSLRVIADHIRSCAFLIADGVIP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRAVR G +LG +G L G + + EL++ ++
Sbjct: 302 SNENRGYVLRRIIRRAVRHGNMLGAQGSFFWKLVGPLISVMGSAGEELAS--------QQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ L T L G+ F LYDTFGFP
Sbjct: 354 SQVEQILKTEEEQFAKTLERGLALLDEELEKLQGDT--------LDGETVFRLYDTFGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGY 515
++T +V E + +D GF+ ME QR Q A A D S + + + F GY
Sbjct: 406 ADLTADVCRERNLKIDEAGFEKAMEQQR---QRAREASGFGADYS-KVIQIDAASAFKGY 461
Query: 516 DTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
+ L + V ++ V+GKP ++ G + ++L+ TPFY ESGGQ+GD G L
Sbjct: 462 EQLELNSTVTAIFVDGKPATEIVAGQEGVIVLDETPFYGESGGQVGDTGEL------KSD 515
Query: 576 TAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAAL 635
A V D +K G H GT+ G + +G + A VD R R +++H+ATHLL AAL
Sbjct: 516 AATFTVNDTQK-YGQAIGHTGTLAAGQIRIGDRLSAQVDQARRDRIRLNHSATHLLHAAL 574
Query: 636 KKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALD 695
++V+G +Q GSLV LRFDF+ + E+ ++E ++N + ++T +M L+
Sbjct: 575 RQVLGHHVAQKGSLVNDKYLRFDFSHFEAMKPEEIRQVEEIVNAQVRRNLAIETNIMELE 634
Query: 696 DAKRAGAIAMFGEKYGEQVKISS 718
AK GA+A+FGEKY + V++ S
Sbjct: 635 AAKSHGAMALFGEKYDDHVRVLS 657
>gi|386361331|ref|YP_006059576.1| alanine--tRNA ligase [Thermus thermophilus JL-18]
gi|383510358|gb|AFH39790.1| alanine--tRNA ligase [Thermus thermophilus JL-18]
Length = 882
Score = 556 bits (1433), Expect = e-155, Method: Compositional matrix adjust.
Identities = 315/679 (46%), Positives = 428/679 (63%), Gaps = 46/679 (6%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPED-PTVLLTIAGMLQFKPIFLGKVP----RQVPRAA 107
IR++FL F+ +GH LPS SL+PED P++L T AGM KP FLG P ++ R
Sbjct: 6 IREKFLSFFEGKGHLRLPSFSLIPEDDPSLLFTSAGMAPLKPYFLGAKPIFFGKEWRRIT 65
Query: 108 TSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
T Q C+R D+ENVGRTSRH+T+FEMLGNFSFGDYFKKEAI WAWEF T L RLW
Sbjct: 66 TCQECLRVGDIENVGRTSRHNTYFEMLGNFSFGDYFKKEAILWAWEFLTEHLKLDPERLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGA-----TGPCGPCSEIYYDFHP 222
++V+EDDDEA+ IW VGVP E I R G D+N+W GA GP GPCSEI+YD P
Sbjct: 126 VTVFEDDDEAYGIWRDLVGVPEEKIGRFGEDENYWPGGAITHGPNGPSGPCSEIFYDRGP 185
Query: 223 DRGCSD---VDLGDDTRFIEFYNLVFMQYNKK----DDGSLEPLKQKNIDTGLGLERIAR 275
G D + G RF+E +NLVF QY+++ G L+PL QKNIDTG+GL R+A
Sbjct: 186 AYGTPDETGPNTGSGDRFVEIWNLVFTQYDRQGPIPGPGILKPLPQKNIDTGMGLYRVAA 245
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
ILQ V + Y TD FP+I++ + ++ Y + +++ ++I DH+RA+V LSDG
Sbjct: 246 ILQDVEDFYRTDTFFPLIQEVARMSGRPY---EGKASVSHRVIADHVRAVVAALSDGATF 302
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN GRGYV+RRL+RRA+R G LLG L FL +A EL +++
Sbjct: 303 SNTGRGYVIRRLLRRALRHGYLLG--------LSDPFLHRLAPLVAELLGDFYPEMRENL 354
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
+ ++++ EE RF++TLE G K LD +L+ + G V L G++AF LYDT+GFP
Sbjct: 355 PAVEKQIRLEEERFLETLEGGLKRLDALLSGL-----KPGEV--LPGKEAFRLYDTYGFP 407
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKI----PDTE 511
+++T E+A E G VD +GF ME Q+ +S+AA + A + E++ TE
Sbjct: 408 LDLTVEIAAERGYGVDTEGFQKAMEEQQERSRAAMAFEREIFKKGAQVLEELYAERGATE 467
Query: 512 FLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQG 571
FLGY+ L A+A V +LL + +++ G++V+V+L++TPFYAE GGQIGD+GFL G
Sbjct: 468 FLGYNALEAEAEVLALLAGDQSLLEAGPGTEVQVVLDKTPFYAEGGGQIGDFGFLEWPGG 527
Query: 572 TNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLL 631
+ V+ KK+ +F+HK + EGVL VG V A+VDPK R+ + +HTATHLL
Sbjct: 528 RAR------VETTKKTERGIFLHKARVEEGVLRVGERVRAVVDPK-RRDTERNHTATHLL 580
Query: 632 QAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKV 691
AAL+ V+G QAGSLVA DRLRFDF PL ELE +E L+N WI + +
Sbjct: 581 HAALRAVLGPHVRQAGSLVAPDRLRFDFTHPEPLKPEELERVELLVNRWIMADFPVTWRY 640
Query: 692 MALDDAKRAGAIAMFGEKY 710
M +++A++ GA+A+FGEKY
Sbjct: 641 MPMEEARKEGAMALFGEKY 659
>gi|339010651|ref|ZP_08643221.1| alanyl-tRNA ligase [Brevibacillus laterosporus LMG 15441]
gi|338772806|gb|EGP32339.1| alanyl-tRNA ligase [Brevibacillus laterosporus LMG 15441]
Length = 883
Score = 556 bits (1433), Expect = e-155, Method: Compositional matrix adjust.
Identities = 306/676 (45%), Positives = 435/676 (64%), Gaps = 31/676 (4%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
+G+ +R+ +LDF+ S+GH++ PSASLVP +DP++L +G+ K F G++ + PR
Sbjct: 5 TGNQVRQMYLDFFVSKGHRIEPSASLVPVDDPSLLWINSGVATLKKYFDGRIIPENPRIT 64
Query: 108 TSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
+Q+ IRTND+ENVGRT+RHHTFFEMLGNFS GDYFK E+I WAWEF T G +
Sbjct: 65 NAQKSIRTNDIENVGRTARHHTFFEMLGNFSIGDYFKVESIHWAWEFLTSPEWIGFDPEK 124
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRG 225
L ++++ +DDEAFEIWNKE+G+P E I R+ + NFW+ G GP GP +EI+YD G
Sbjct: 125 LSVTIHPEDDEAFEIWNKEIGIPEERIIRL--EGNFWDIGE-GPSGPNTEIFYDRGEAFG 181
Query: 226 C--SDVDL---GDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKV 280
SD +L G++ R++E +NLVF Q+N DG+ PL +KNIDTG+GLER+ I+Q V
Sbjct: 182 NDPSDPELYPGGENERYLEVWNLVFSQFNHNPDGTYTPLPKKNIDTGMGLERMVSIIQNV 241
Query: 281 PNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGR 340
NNYETDL+FP+I++ S+++ VSY ++ND ++ LK+I DH+R + + + DG PSN GR
Sbjct: 242 DNNYETDLLFPLIEQTSQISGVSY-KTNDELDVALKVIADHVRTVTFAIGDGALPSNEGR 300
Query: 341 GYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILE 400
GYV+RRL+RRAVR G++LGI + FL ++ + ++ +V + I
Sbjct: 301 GYVLRRLLRRAVRMGKMLGI--------QKPFLYTLTKTVGDMMGEFYPEVVQKRDFIER 352
Query: 401 ELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITK 460
++ EE RF +TLE G +L+ M+ + T+ SG +LSGQD F LYDT+GFPV++T+
Sbjct: 353 VIRAEEERFHETLEEGLSILEGMV----TATKASGG-NQLSGQDTFKLYDTYGFPVDLTE 407
Query: 461 EVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTLSA 520
+ A EHG+SVD GF+ ME QR +++AA V L+E +EF+GY TLS
Sbjct: 408 DFAMEHGLSVDRDGFEQAMEEQRERARAARQDVDSMQTQGGALSELTVASEFIGYTTLST 467
Query: 521 KAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVE 580
A VE+++++ + V + +G +V+L+RTPFYAESGGQI D G L T
Sbjct: 468 DAKVEAIIIDNQLVKEAQEGVTCQVVLDRTPFYAESGGQINDEGTL------TADTVKAR 521
Query: 581 VKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIG 640
V DV+K VH+ I G L VG +V A VD + R +HTATHLL ALK V+G
Sbjct: 522 VIDVQKGPHGQNVHQVLIEAGTLHVGDQVAAEVDQQGRNATIKNHTATHLLHQALKDVLG 581
Query: 641 QETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRA 700
+QAGSLV+ +RLRFDF + ELE IE+++N I + M + +AK
Sbjct: 582 THVNQAGSLVSPERLRFDFTHISSITAEELERIEQIVNEQIWSNLAVSISNMKIAEAKEL 641
Query: 701 GAIAMFGEKYGEQVKI 716
GA+A+FGEKYG+ V++
Sbjct: 642 GAMALFGEKYGDIVRV 657
>gi|115351339|ref|YP_773178.1| alanyl-tRNA synthetase [Burkholderia ambifaria AMMD]
gi|122323447|sp|Q0BG79.1|SYA_BURCM RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|115281327|gb|ABI86844.1| alanyl-tRNA synthetase [Burkholderia ambifaria AMMD]
Length = 874
Score = 556 bits (1433), Expect = e-155, Method: Compositional matrix adjust.
Identities = 301/679 (44%), Positives = 425/679 (62%), Gaps = 44/679 (6%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR++FL F+ S+GH ++ S+SLVP DPT++ T +GM+QFK +FLG PR RA T+QR
Sbjct: 6 IREKFLKFFESKGHTIVRSSSLVPGNDPTLMFTNSGMVQFKDVFLGTDPRPYSRATTAQR 65
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AI++AWE T + LP +LW
Sbjct: 66 SVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIRFAWELLTTVYQLPKEKLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYYDF 220
++VY++DDEA++IW KEVGVP E I R+G A DNFW G TGPCGPC+EI+YD
Sbjct: 126 VTVYQEDDEAYDIWAKEVGVPTERIIRIGDNKGARYASDNFWTMGDTGPCGPCTEIFYDH 185
Query: 221 HPD--RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQ 278
PD G D R+IE +NLVFMQ+N+ G++ L ++++DTG+GLER+A +LQ
Sbjct: 186 GPDVWGGPPGSPEEDGDRYIEIWNLVFMQFNRDAQGNMTRLPKQSVDTGMGLERLAAVLQ 245
Query: 279 KVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNI 338
V +NYE DL +IK A+ + +S D TN +LK+I DH+RA +L+ DGV P N
Sbjct: 246 HVHSNYEIDLFQNLIKAAARVTEIS-----DLTNNSLKVIADHIRACSFLIVDGVIPGNE 300
Query: 339 GRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRI 398
GRGYV+RR++RRA+R G LG KG F +A+ E+ ++K EQR+
Sbjct: 301 GRGYVLRRIVRRAIRHGYKLGRKGS-------FFHKLVADLVAEMGAAY-PELKEAEQRV 352
Query: 399 LEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEI 458
+ L++EE RF +T+E G +L+ LAD ++ G V L G+ AF L+DT+GFP+++
Sbjct: 353 TDVLRQEEERFFETIEHGMSILEAALADVEAK---GGKV--LDGELAFKLHDTYGFPLDL 407
Query: 459 TKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTL 518
T +V E G++VD FD M QR Q++AA + L T F GY+ +
Sbjct: 408 TADVCRERGMTVDEPAFDDAMARQREQARAAGK-----FKATQGLEYSGAKTTFHGYEEI 462
Query: 519 S-AKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTA 577
+ A V +L V+G V +V G D V+L+ TPFYAESGGQ+GD G L N T
Sbjct: 463 AFDDAKVVALYVDGSAVNEVKAGQDAVVVLDHTPFYAESGGQVGDQGVL-----ANAATR 517
Query: 578 VVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKK 637
V D K V H GT+ +G L++G + A +D R R + +H+ATHL+ AL++
Sbjct: 518 FA-VADTLKVQADVVGHHGTLEQGTLKIGDVLRAEIDAHRRARTQRNHSATHLMHKALRE 576
Query: 638 VIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDA 697
V+G Q GSLV ++ RFDF + P+ D E+ +E+++N I +VM D+A
Sbjct: 577 VLGAHVQQKGSLVDAEKTRFDFAHNAPMTDDEIRRVEQIVNNEILANAPGIVRVMPYDEA 636
Query: 698 KRAGAIAMFGEKYGEQVKI 716
+ GA+A+FGEKYG++V++
Sbjct: 637 VKGGAMALFGEKYGDEVRV 655
>gi|359441966|ref|ZP_09231850.1| alanyl-tRNA synthetase [Pseudoalteromonas sp. BSi20429]
gi|358036227|dbj|GAA68099.1| alanyl-tRNA synthetase [Pseudoalteromonas sp. BSi20429]
Length = 866
Score = 556 bits (1433), Expect = e-155, Method: Compositional matrix adjust.
Identities = 301/672 (44%), Positives = 425/672 (63%), Gaps = 42/672 (6%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR++FLDF+AS+ H+++PS+SL+P D T+L AGM+QFK +FLG R RA +SQR
Sbjct: 9 IRQQFLDFFASKQHQIVPSSSLIPGNDATLLFNNAGMVQFKDVFLGAESRPYTRATSSQR 68
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI++AWEF T LP +L
Sbjct: 69 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAIKFAWEFLTEVVSLPKEKLL 128
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDF--HPDRG 225
+++Y DD+EAFE W+K++G+ + I R+ DNFW+ G TGPCGPCSEI+YD H G
Sbjct: 129 VTIYHDDEEAFEYWSKDIGLSEDRIIRIATSDNFWSMGDTGPCGPCSEIFYDHGEHIWGG 188
Query: 226 CSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYE 285
D RFIE +NLVFMQYN++ DG++ PL ++++DTG+GLERI+ ILQ V +NYE
Sbjct: 189 PPGSPEEDGDRFIEIWNLVFMQYNRQSDGTMLPLPKQSVDTGMGLERISAILQGVHSNYE 248
Query: 286 TDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVR 345
DL +I A+ + N + D + +L+++ DH+R+ +L+SDGV PSN GRGYV+R
Sbjct: 249 IDLFQGLIAAAASVTN-----AQDMDDKSLRVVADHIRSCAFLISDGVMPSNEGRGYVLR 303
Query: 346 RLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKR- 404
R+IRRAVR G LG +G L A + + + EL A++Q I+E++ R
Sbjct: 304 RIIRRAVRHGNKLGAQGSFFYKLVAALIEQMGQAYPEL---------AKQQEIIEKVLRI 354
Query: 405 EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAE 464
EE +F +TLERG +L++ L+D G + + G F LYDT+GFP ++T +VA
Sbjct: 355 EEEQFGKTLERGLAILEESLSDL------KGDI--IPGDLVFKLYDTYGFPADLTADVAR 406
Query: 465 EHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTLSAKAIV 524
E +++D +GF+ M QR+ +Q A K D + L T+F GYD+ A V
Sbjct: 407 ERQMTIDHQGFEECMAVQRKTAQ---QAGKFGADYNDQLKSD-KHTDFKGYDSTHYSATV 462
Query: 525 ESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDV 584
+ G+ V + G V+L+RTPFYAESGGQ GD G + V G T +
Sbjct: 463 IEIFAGGEAVQLLEDGQQGIVVLDRTPFYAESGGQTGDSGTITVAGGEFNVTNTTK---- 518
Query: 585 KKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETS 644
LG+ F H GT+ +G + V +V+A +D R K +HTATH+L AL++++G
Sbjct: 519 ---LGNAFAHHGTV-QGRIGVNDKVDATIDDTRRDSIKKNHTATHILHEALRQLLGDHVG 574
Query: 645 QAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIA 704
Q GSLV DRLRFDF+ + EL EIER++N I L T++MA+DDAK GA+A
Sbjct: 575 QKGSLVQPDRLRFDFSHFEAVTKDELREIERVVNDEIRRNFALNTELMAIDDAKAKGAMA 634
Query: 705 MFGEKYGEQVKI 716
+FGEKY ++V++
Sbjct: 635 LFGEKYDDEVRV 646
>gi|334125326|ref|ZP_08499315.1| alanine--tRNA ligase [Enterobacter hormaechei ATCC 49162]
gi|333386789|gb|EGK57993.1| alanine--tRNA ligase [Enterobacter hormaechei ATCC 49162]
Length = 875
Score = 556 bits (1433), Expect = e-155, Method: Compositional matrix adjust.
Identities = 318/692 (45%), Positives = 440/692 (63%), Gaps = 68/692 (9%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQYAWELLTGENWFNLPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEAF+IW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYETDDEAFDIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR------GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLER 272
D H D G ++ D GD R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLER
Sbjct: 188 D-HGDHIWGGPPGSAEED-GD--RYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLER 243
Query: 273 IARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDG 332
IA +LQ V +NYE DL +IK +++ + D N +L++I DH+R+ +L++DG
Sbjct: 244 IAAVLQHVNSNYEIDLFSTLIKAVADVTGAT-----DLNNKSLRVIADHIRSCAFLIADG 298
Query: 333 VFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVK 392
V PSN RGYV+RR+IRRA+R G +LG K L G + + EL K
Sbjct: 299 VIPSNENRGYVLRRIIRRAIRHGNMLGAKDTFFYKLVGPLIGVMGSAGDEL--------K 350
Query: 393 AREQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTF 452
++ ++ + LK EE +F +TLERG LLD LA T L G+ AF LYDT+
Sbjct: 351 RQQAQVEQVLKTEEEQFARTLERGLALLDDELAKLKGDT--------LDGETAFRLYDTY 402
Query: 453 GFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQ------AAHNAVKLSVDDSADLAEK 506
GFPV++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 403 GFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARESSGFGADYNAM-IRVDSA------ 455
Query: 507 IPDTEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFL 566
+EF GY+ L+ + V +L V+GK V +S G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 ---SEFKGYEELALTSNVTALFVDGKAVDSISAGQEAVVILDKTPFYAESGGQVGDKGEL 512
Query: 567 YVTQGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHT 626
+G V + + +++G H+G + G L+VG V+A VD R R +++H+
Sbjct: 513 ---KGNGFSFTVSDTQKYGQAIG----HQGKLVSGSLKVGEGVQANVDEARRARIRLNHS 565
Query: 627 ATHLLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANL 686
ATHL+ AAL+ V+G +Q GSLV LRFDF+ + +E+ +E L+N I
Sbjct: 566 ATHLMHAALRDVLGTHVAQKGSLVNDKVLRFDFSHFEAMKPSEIRAVEDLVNAQIRRNLP 625
Query: 687 LQTKVMALDDAKRAGAIAMFGEKYGEQVKISS 718
++T VM L+DAK+ GA+A+FGEKY ++V++ S
Sbjct: 626 IETHVMDLEDAKKKGAMALFGEKYDDRVRVLS 657
>gi|224825848|ref|ZP_03698952.1| alanyl-tRNA synthetase [Pseudogulbenkiania ferrooxidans 2002]
gi|224602072|gb|EEG08251.1| alanyl-tRNA synthetase [Pseudogulbenkiania ferrooxidans 2002]
Length = 877
Score = 556 bits (1433), Expect = e-155, Method: Compositional matrix adjust.
Identities = 306/683 (44%), Positives = 428/683 (62%), Gaps = 51/683 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR++FLDF+AS+GH+V+PS+SL+P DPT++ T+AGM+QFK +FLG R RA TSQ+
Sbjct: 6 IRQKFLDFFASKGHQVVPSSSLIPGNDPTLMFTVAGMVQFKDVFLGFEKRDYTRATTSQK 65
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AI +AWEF T E LP +
Sbjct: 66 CLRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAITYAWEFLTGEQWLALPKEK 125
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
L ++VY DDEAF+IW+K VG+PVE I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 126 LMVTVYASDDEAFDIWHKTVGLPVEKIVRIGDNKGAAYASDNFWTMGDTGPCGPCTEIFY 185
Query: 219 DFHPD-----RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERI 273
D + G D D GD RF+E +N VFMQ+N+ + G+L PL + ++DTG+GLER+
Sbjct: 186 DHGEEVAGGPPGSPDED-GD--RFMEIWNNVFMQFNRDETGTLHPLPKPSVDTGMGLERL 242
Query: 274 ARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGV 333
+ +LQ V +NYETD + +++ A+ V Y+Q+ +LK+I DH+RA ++++DG+
Sbjct: 243 STVLQHVKSNYETDGLACLVRAAARETGVEYSQNVP----SLKVIADHIRACSFMIADGI 298
Query: 334 FPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKA 393
PSN GRGYV+RR+ RRA+R G LG KG F I +E +++
Sbjct: 299 LPSNEGRGYVLRRIARRAIRHGYKLGQKG--------LFFHKIVADLVEEMGGAYPELRQ 350
Query: 394 REQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFG 453
++ I + L+ EE+RF +TLE G L+D L G R+ G F LYDTFG
Sbjct: 351 QQAHIEDNLRAEEVRFAETLEHGMALVDAAL---------QGGKIRMDGDTIFKLYDTFG 401
Query: 454 FPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFL 513
FPV++T ++ E + VDM+GF+ M QR +++AA S + +L DT F
Sbjct: 402 FPVDLTADICRERNIEVDMEGFEHAMNAQRERARAAS-----SFKMTGNLEYAGADTRFH 456
Query: 514 GYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTN 573
GY+T S A V +L PV ++++G + V+L+ T FYAE GGQ+GD G + V+ G
Sbjct: 457 GYETASVDAKVLALFKGNTPVEQLAEGEEGVVVLDDTAFYAEGGGQVGDCGEISVSGGVG 516
Query: 574 QQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQA 633
A+ +V D +K + F H G + G L VG V+A +D R +H+ATHLL A
Sbjct: 517 ---ALFDVTDTQKIKAATFGHSGRVVRGALHVGDTVQATIDLHKRLATARNHSATHLLHA 573
Query: 634 ALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMA 693
AL+ V+G +Q GSLV +R RFDF P+ ++ EIER++N + + VMA
Sbjct: 574 ALRHVLGSHVAQKGSLVNAERTRFDFAHGEPVSVAQIAEIERVVNRIVLHNVEVSANVMA 633
Query: 694 LDDAKRAGAIAMFGEKYGEQVKI 716
DDA RAGAIA+FGEKYG++V++
Sbjct: 634 YDDAIRAGAIALFGEKYGDEVRV 656
>gi|295097277|emb|CBK86367.1| alanyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae NCTC
9394]
Length = 875
Score = 556 bits (1433), Expect = e-155, Method: Compositional matrix adjust.
Identities = 317/692 (45%), Positives = 442/692 (63%), Gaps = 68/692 (9%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQYAWELLTGENWFNLPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEAF+IW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYETDDEAFDIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR------GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLER 272
D H D G ++ D GD R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLER
Sbjct: 188 D-HGDHIWGGPPGSAEED-GD--RYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLER 243
Query: 273 IARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDG 332
IA +LQ V +NYE DL +IK +E+ + D +N +L++I DH+R+ +L++DG
Sbjct: 244 IAAVLQHVNSNYEIDLFSTLIKAVAEVTGAT-----DLSNKSLRVIADHIRSCAFLIADG 298
Query: 333 VFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVK 392
V PSN RGYV+RR+IRRA+R G +LG K L G + + EL K
Sbjct: 299 VIPSNENRGYVLRRIIRRAIRHGNMLGAKDTFFYKLVGPLIGVMGSAGDEL--------K 350
Query: 393 AREQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTF 452
++ ++ + LK EE +F +TLERG LLD LA T L G+ AF LYDT+
Sbjct: 351 RQQAQVEQVLKTEEEQFARTLERGLALLDDELAKLKGDT--------LDGETAFRLYDTY 402
Query: 453 GFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQ------AAHNAVKLSVDDSADLAEK 506
GFPV++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 403 GFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARESSGFGADYNAM-IRVDSA------ 455
Query: 507 IPDTEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFL 566
+EF GY+ L+ + V +L V+GK V +S G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 ---SEFKGYEELALTSNVTALFVDGKAVDSISAGQEAVVILDKTPFYAESGGQVGDKGEL 512
Query: 567 YVTQGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHT 626
+G +V + + +++G H+G + G L+VG V+A VD R R +++H+
Sbjct: 513 ---KGNGFSFSVSDTQKYGQAIG----HQGKLVSGSLKVGEGVQANVDEARRARIRLNHS 565
Query: 627 ATHLLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANL 686
ATHL+ AAL++V+G +Q GSLV LRFDF+ + +E+ +E L+N I
Sbjct: 566 ATHLMHAALREVLGTHVAQKGSLVNDKVLRFDFSHFEAMKPSEIRAVEDLVNAQIRRNLP 625
Query: 687 LQTKVMALDDAKRAGAIAMFGEKYGEQVKISS 718
++T +M L+ AK+ GA+A+FGEKY ++V++ S
Sbjct: 626 IETHIMDLEAAKKKGAMALFGEKYDDRVRVLS 657
>gi|89075063|ref|ZP_01161504.1| alanyl-tRNA synthetase [Photobacterium sp. SKA34]
gi|89049150|gb|EAR54715.1| alanyl-tRNA synthetase [Photobacterium sp. SKA34]
Length = 874
Score = 556 bits (1432), Expect = e-155, Method: Compositional matrix adjust.
Identities = 306/687 (44%), Positives = 432/687 (62%), Gaps = 51/687 (7%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S D IR+ +L F+ S+GH+++ S+SLVP DPT+L T AGM QFK FLG R RA
Sbjct: 4 STDEIRRAYLAFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDTFLGLEKRSYTRAT 63
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
T+QRC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AI +AWEF T LPA
Sbjct: 64 TAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKHDAIGYAWEFLTSVLKLPA 123
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG--------ADDNFWNSGATGPCGPCSE 215
+RL ++VYE DDEAF+IWNKE+G+P + I R+G DNFW G TGPCGPC+E
Sbjct: 124 DRLVVTVYETDDEAFDIWNKEIGIPADRIVRIGDKKGGKPFESDNFWQMGDTGPCGPCTE 183
Query: 216 IYYDFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLER 272
I+YD H D G D RFIE +N VFMQ+N++ DG++EPL + ++DTG+G+ER
Sbjct: 184 IFYD-HGDHIWGGRPGTPEEDGDRFIEIWNNVFMQFNRQVDGTMEPLPKPSVDTGMGIER 242
Query: 273 IARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDG 332
IA I+Q V +NYE D+ +IK+A+++ D +N +L+++ DH+R+ YL+SDG
Sbjct: 243 IAAIMQGVHSNYEIDIFQTLIKEAAKVIGFE-----DLSNQSLRVVADHIRSCAYLISDG 297
Query: 333 VFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVK 392
V PSN GRGYV+RR+IRRAVR G LG EGAF + E+ ++K
Sbjct: 298 VMPSNEGRGYVLRRIIRRAVRHGNKLGA--------EGAFFYKLVGPLAEIMGTAGEELK 349
Query: 393 AREQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTF 452
A+++ + + LK EE F +TL+RG +L++ L D L G V L G+ F LYDT+
Sbjct: 350 AQQELVEKVLKIEEDNFGRTLDRGLTILNEAL-DKL-----DGKV--LDGETVFKLYDTY 401
Query: 453 GFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKI-PDTE 511
GFP ++T +VA E G ++D GF+ ME QR++++ A N VD + A K+ +T
Sbjct: 402 GFPADLTNDVARERGFTIDEDGFEAAMEEQRQRARDAGN---FGVD--YNNAIKVDAETV 456
Query: 512 FLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQG 571
F GY ++ + +L +G V V+ G + V+L TPFYAESGGQ GD G L
Sbjct: 457 FCGYSATDGESEIVALYRDGVAVDSVNAGEEALVVLTNTPFYAESGGQCGDSGIL----- 511
Query: 572 TNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLL 631
+ + V D +K G+ HKG + EG L VG+++ A VD R ++H+ATHL+
Sbjct: 512 -TAEAVLFNVDDTQK-FGAAIGHKGQVAEGSLTVGQKLTASVDSARRAAISLNHSATHLM 569
Query: 632 QAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKV 691
AAL+ ++G+ SQ GSLV D LRFDF+ + +L +E ++N I ++++T +
Sbjct: 570 HAALRTILGEHVSQKGSLVKADGLRFDFSNLEAVKPEQLRAVETMVNDQIRANHVIETNI 629
Query: 692 MALDDAKRAGAIAMFGEKYGEQVKISS 718
M ++ AK GA+A+FGEKY ++V++ S
Sbjct: 630 MDIEAAKAKGAMALFGEKYDDEVRVLS 656
>gi|367472755|ref|ZP_09472331.1| alanyl-tRNA synthetase [Bradyrhizobium sp. ORS 285]
gi|365274938|emb|CCD84799.1| alanyl-tRNA synthetase [Bradyrhizobium sp. ORS 285]
Length = 893
Score = 556 bits (1432), Expect = e-155, Method: Compositional matrix adjust.
Identities = 300/678 (44%), Positives = 423/678 (62%), Gaps = 35/678 (5%)
Query: 51 DSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATS 109
+ IR FL+F+A+ GH+++PS+ LVP DPT++ T AGM+QFK +F G R RA TS
Sbjct: 5 NEIRSTFLNFFAANGHEIVPSSPLVPRNDPTLMFTNAGMVQFKNVFTGVEKRPYNRATTS 64
Query: 110 QRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANR 165
Q+C+R ND++NVG T+RHHTFFEMLGNFSFGDYFK+ AI+ AW+ T EFGLP ++
Sbjct: 65 QKCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKENAIELAWKLVTKEFGLPKDK 124
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDR- 224
L +VY DDDEAF +W K G+P I R+ DNFW G TGPCGPCSEI+YD H D+
Sbjct: 125 LTATVYIDDDEAFGLWKKIAGLPESRIIRIAGSDNFWQMGDTGPCGPCSEIFYD-HGDKI 183
Query: 225 --GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPN 282
G D RFIE +NLVFMQY + + G PL + +IDTG GLER+A +LQ +
Sbjct: 184 WGGPPGSPEADGDRFIEIWNLVFMQYEQLEGGVRNPLPKPSIDTGAGLERVAAVLQGKHD 243
Query: 283 NYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGY 342
NY+ DL +I+ ++L N A +L++I DHLRA +L+SDGV PSN GRGY
Sbjct: 244 NYDIDLFVALIRAIADLTN---ADPQGPQKASLRVIADHLRASSFLISDGVLPSNEGRGY 300
Query: 343 VVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEEL 402
V+RR++RRA+R +LLG + L GA + + EL ++A E I E L
Sbjct: 301 VLRRIMRRAMRHAQLLGAREPLMHKLVGALTREMGQAYPEL-------IRA-EGLIKETL 352
Query: 403 KREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEV 462
+ EE RF +TLERG +LD+ A +LS+ G AF LYDT+GFP+++T++
Sbjct: 353 RLEETRFRKTLERGLAILDEKSA-SLSKG------DMFDGDVAFTLYDTYGFPLDLTQDA 405
Query: 463 AEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSA--DLAEKIPDTEFLGYDTLSA 520
+ G+SVD F ME Q+ +++AA + ++ L EK+ TEFLGY+T +A
Sbjct: 406 LKSRGISVDQASFTDAMERQKAKARAAWAGSGEAATETVWFPLREKLGATEFLGYETETA 465
Query: 521 KAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVE 580
+ V +L+ +G V + G ++LN+TPFY ESGGQ+GD G L + V
Sbjct: 466 EGAVTALVKDGAEVDSLKAGESGAIVLNQTPFYGESGGQVGDTGVL------TGEGVRVR 519
Query: 581 VKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIG 640
+ D +K G +F H GT+ +G L++G ++ VD R + +H+ATH+L AL++V+G
Sbjct: 520 ITDTQKKAGDLFAHIGTVEQGTLKLGTALQLDVDHTRRSAIRANHSATHILHEALRQVLG 579
Query: 641 QETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRA 700
+Q GSLV+ DRLRFDF +P+ EL +E + N + + + T++M LDDA+ A
Sbjct: 580 DHIAQRGSLVSPDRLRFDFVHPKPITAEELARVEDIANDVVLENAEVTTRLMGLDDAREA 639
Query: 701 GAIAMFGEKYGEQVKISS 718
GA A+FGEKYG++V++ S
Sbjct: 640 GARALFGEKYGDEVRVVS 657
>gi|205830244|sp|A1RHG5.2|SYA_SHESW RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|205830245|sp|A4Y931.2|SYA_SHEPC RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
Length = 874
Score = 556 bits (1432), Expect = e-155, Method: Compositional matrix adjust.
Identities = 313/683 (45%), Positives = 427/683 (62%), Gaps = 56/683 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
+R FL+F+ S GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 8 LRSAFLEFFRSHGHQVVDSSSLVPGNDPTLLFTNAGMNQFKDVFLGMDKRNYTRATTAQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
C+R ND++NVG T+RHHTFFEMLGNFSFGDYFK+EAI + W F T LP RL
Sbjct: 68 CVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKEEAICFGWSFLTETLKLPKERLC 127
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYYDF 220
+++Y+ DDEAFEIWNK++GV E+I R+G A DNFW G TGPCGPC+EI+YD
Sbjct: 128 VTIYQTDDEAFEIWNKKIGVAAENIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFYD- 186
Query: 221 HPD-----RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
H D R S + GD RFIE +N+VFMQYN+ G + PL + ++DTG+G+ERIA
Sbjct: 187 HGDHIWGGRPGSPEEDGD--RFIEIWNIVFMQYNRHISGEMLPLPKPSVDTGMGIERIAA 244
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
I+Q V +NYE D+ +I KA+E+ V+ D +N +L++I DH+R+ +L++DGV P
Sbjct: 245 IMQGVHSNYEIDIFRALIAKAAEIIGVT-----DLSNKSLRVIADHIRSCAFLVADGVMP 299
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN GRGYV+RR+IRRAVR G LG AF + I++ + A
Sbjct: 300 SNEGRGYVLRRIIRRAVRHGNKLGAT--------EAFFYKLVPTLIDVMGDAAKGL-AET 350
Query: 396 QRILEE-LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGF 454
Q I+E+ LK EE +F +TLERG +LD L++ T L G+ F LYDT+GF
Sbjct: 351 QVIVEKALKAEEEQFARTLERGLGILDAALSELTGDT--------LDGETVFKLYDTYGF 402
Query: 455 PVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKI-PDTEFL 513
P+++T +V E + VD GF+ M QR ++QAA N D +A L KI +T F
Sbjct: 403 PMDLTADVCRERNIIVDEAGFEAAMAEQRSRAQAAGN---FGADYNAAL--KIDAETAFC 457
Query: 514 GYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTN 573
GY L +A V ++ NG+ V + G + ++L+ TPFYAESGGQ+GD G L V G
Sbjct: 458 GYTELVGQAKVTAIYQNGESVTAIKAGDEAVLVLDVTPFYAESGGQVGDKGQL-VANGIE 516
Query: 574 QQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQA 633
V D +K G H+G + G L +G+ VEA VD KLR R +++H+ THLL A
Sbjct: 517 -----FTVNDTQK-YGQATGHQGVLVAGSLSIGQMVEAKVDKKLRHRTQLNHSVTHLLHA 570
Query: 634 ALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMA 693
AL++V+G +Q GSLV +RLRFDF+ + EL+++E L+N I + L+ MA
Sbjct: 571 ALRQVLGTHVTQKGSLVDPERLRFDFSHFEAVKPAELKKVEELVNTQIRRNHELKVAEMA 630
Query: 694 LDDAKRAGAIAMFGEKYGEQVKI 716
+D+AK GA+A+FGEKY QV++
Sbjct: 631 IDEAKEKGAMALFGEKYDAQVRV 653
>gi|405983769|ref|ZP_11042074.1| alanine-tRNA ligase [Slackia piriformis YIT 12062]
gi|404388584|gb|EJZ83666.1| alanine-tRNA ligase [Slackia piriformis YIT 12062]
Length = 877
Score = 556 bits (1432), Expect = e-155, Method: Compositional matrix adjust.
Identities = 297/681 (43%), Positives = 427/681 (62%), Gaps = 48/681 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPR---AATS 109
IR+++L F+ +G K +PS+SL+P+DP++LLT AGM+QFKP FL V P + T
Sbjct: 9 IREKYLSFFEEKGCKRMPSSSLIPDDPSLLLTSAGMVQFKPYFL-HVKEFDPAYIGSTTV 67
Query: 110 QRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWIS 169
Q+C+RTND++ +G T RH +FFEMLGNFSFG YFK E WA+EF+T LP +L+ +
Sbjct: 68 QKCVRTNDIDIIGTTGRHLSFFEMLGNFSFGKYFKDEMCAWAYEFATEVLELPKEKLYFT 127
Query: 170 VYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSDV 229
V+E+DDE EIW K++GV +HI R+G DDNFW +G TGPCGPCSEIY+D PD GC
Sbjct: 128 VFENDDETIEIW-KKLGVSEDHISRLGEDDNFWRAGPTGPCGPCSEIYFDQGPDFGCGSP 186
Query: 230 DLG---DDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYET 286
D D RF+EF+N VF QY+ ++DG+L PL KNIDTG+GLER+A I+Q V +NYET
Sbjct: 187 DCAPGCDCDRFLEFWNCVFTQYDGQEDGTLAPLPTKNIDTGMGLERMAAIMQGVQSNYET 246
Query: 287 DLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRR 346
D++ +I L+ SY + N ++L+L+II DH R++ ++++DG+ PSN GRGYV+RR
Sbjct: 247 DVMRDLISVGERLSGKSY-KENAESDLSLRIIADHSRSVTFMIADGILPSNEGRGYVLRR 305
Query: 347 LIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREE 406
L+RRAV LGI EGAFL + + + L H+ +V + + + EE
Sbjct: 306 LLRRAVMHAHKLGI--------EGAFLSNYVDAIVRLMGHVYPEVVDNRELVERVILSEE 357
Query: 407 LRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEH 466
RF TL +G+ L ADAL + G+V L G AF L+DT+GFPVEIT+E+ +
Sbjct: 358 ERFGVTLRQGQAYL----ADALEKLE--GTV--LDGATAFTLHDTYGFPVEITEEICADA 409
Query: 467 GVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSA-----------DLAEKIPDTEFLGY 515
++VD +GF+ M+ QR +++AA + DD+ DL +++ T F+GY
Sbjct: 410 NITVDKEGFEACMDQQRERARAA------TKDDAEAAWSTYGGIHDDLLKELGATGFVGY 463
Query: 516 DTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
D L+A A V++++ +GK V +++G + EV+L TPFYAE GG++GD G + +
Sbjct: 464 DRLTATAEVKAVVKDGKRVESLAQGEEGEVVLGLTPFYAEMGGEVGDTGTI------EAE 517
Query: 576 TAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAAL 635
++V D K + VH + EG + G V AIVD R+R +HT THLL AAL
Sbjct: 518 GIKLQVVDTKAPAKGLVVHSVKVVEGSVHAGDTVRAIVDELRRKRITRNHTCTHLLHAAL 577
Query: 636 KKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALD 695
++V+G QAGS V DRLRFDF + ++ E+ER+ N I A + +LD
Sbjct: 578 REVLGDHVKQAGSYVGPDRLRFDFTHFEGMTAEQISEVERVANNVIMQALPMNIYETSLD 637
Query: 696 DAKRAGAIAMFGEKYGEQVKI 716
+A+ +G +FGEKYG+ V++
Sbjct: 638 EARESGVTGLFGEKYGDVVRV 658
>gi|186476371|ref|YP_001857841.1| alanyl-tRNA synthetase [Burkholderia phymatum STM815]
gi|205830006|sp|B2JK72.1|SYA_BURP8 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|184192830|gb|ACC70795.1| alanyl-tRNA synthetase [Burkholderia phymatum STM815]
Length = 874
Score = 555 bits (1431), Expect = e-155, Method: Compositional matrix adjust.
Identities = 300/679 (44%), Positives = 420/679 (61%), Gaps = 44/679 (6%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR++FL F+ S+GH ++ S+SLVP DPT+L T +GM+QFK +FLG R RA T+QR
Sbjct: 6 IREKFLKFFESKGHTIVRSSSLVPGNDPTLLFTNSGMVQFKDVFLGAESRPYSRATTAQR 65
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI +AWE T + LP +LW
Sbjct: 66 SVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAIHYAWELLTGVYQLPKEKLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYYDF 220
++VY++DDEA++IW KEVGVP E I R+G A DNFW TGPCGPCSEI+YD
Sbjct: 126 VTVYQEDDEAYDIWAKEVGVPAERIIRIGDNKGARYASDNFWQMADTGPCGPCSEIFYDH 185
Query: 221 HPD--RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQ 278
PD G D R+IE +NLVFMQ+N+ G++ PL ++ +DTG+GLERIA +LQ
Sbjct: 186 GPDVWGGPPGSPEEDGDRYIEIWNLVFMQFNRDAQGNMTPLPKQCVDTGMGLERIAAVLQ 245
Query: 279 KVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNI 338
V +NYE DL +IK A+ N+ +D +N +LK++ DH+RA +L+ DGV P N
Sbjct: 246 HVHSNYEIDLFQALIKAAARETNI-----DDLSNNSLKVVADHIRACSFLIVDGVIPGNE 300
Query: 339 GRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRI 398
GRGYV+RR++RRA+R G LG K G+F + + ++K EQR+
Sbjct: 301 GRGYVLRRIVRRAIRHGYKLGRK--------GSFFHKLVADLVAQMGGAYPELKDAEQRV 352
Query: 399 LEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEI 458
L++EE RF +T+E G +L+ LAD S+ ++ L G+ AF L+DT+GFP+++
Sbjct: 353 THVLRQEEERFFETIEHGMSILEGALADLDSKGGKT-----LDGEVAFKLHDTYGFPLDL 407
Query: 459 TKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTL 518
T +V E GV+VD FD M QR Q++AA K + D T F GY+ +
Sbjct: 408 TADVCRERGVTVDEPAFDEAMARQREQARAAG---KFKMAQGLDYTG--AKTTFHGYEEI 462
Query: 519 S-AKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTA 577
A V +L V+G V +V+KG V+L+ TPFYAESGGQ+GD G L +
Sbjct: 463 VFDDARVTALYVDGASVNEVTKGQQAVVVLDHTPFYAESGGQVGDQGVL------ANASI 516
Query: 578 VVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKK 637
V D K V H GT+ +G L+VG V+A +D R R +H+ATHL+ AL++
Sbjct: 517 RFGVVDTLKVQADVVGHHGTLEQGTLKVGDVVKAEIDAVRRARTARNHSATHLMHKALRE 576
Query: 638 VIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDA 697
V+G Q GSLV D+ RFDF + P+ D ++ +E ++N + +VMA D+A
Sbjct: 577 VLGGHVQQKGSLVDADKTRFDFAHNAPMTDEQIRRVEEIVNAEVLANAPGIVRVMAYDEA 636
Query: 698 KRAGAIAMFGEKYGEQVKI 716
+ GA+A+FGEKYG++V++
Sbjct: 637 VKGGAMALFGEKYGDEVRV 655
>gi|359435016|ref|ZP_09225250.1| alanyl-tRNA synthetase [Pseudoalteromonas sp. BSi20652]
gi|357918322|dbj|GAA61499.1| alanyl-tRNA synthetase [Pseudoalteromonas sp. BSi20652]
Length = 866
Score = 555 bits (1431), Expect = e-155, Method: Compositional matrix adjust.
Identities = 301/672 (44%), Positives = 423/672 (62%), Gaps = 42/672 (6%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR++FLDF+AS+ H+++PS+SL+P D T+L AGM+QFK +FLG R RA +SQR
Sbjct: 9 IRQQFLDFFASKQHQIVPSSSLIPGNDATLLFNNAGMVQFKDVFLGAESRPYTRATSSQR 68
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI++AWEF T LP +L
Sbjct: 69 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAIKFAWEFLTEVVSLPKEKLL 128
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDF--HPDRG 225
+++Y DD+EAF W E+G+P + I R+ DNFW+ G TGPCGPCSEI+YD H G
Sbjct: 129 VTIYHDDEEAFGYWANEIGLPEDRIIRIATSDNFWSMGDTGPCGPCSEIFYDHGEHIWGG 188
Query: 226 CSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYE 285
D RFIE +NLVFMQYN++ DG++ PL ++++DTG+GLERI+ ILQ V +NYE
Sbjct: 189 PPGSPEEDGDRFIEIWNLVFMQYNRQSDGTMLPLPKQSVDTGMGLERISAILQGVHSNYE 248
Query: 286 TDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVR 345
DL +I A+ + N + D + +L+++ DH+R+ +L+SDGV PSN GRGYV+R
Sbjct: 249 IDLFQGLIAAAASVTN-----AQDMDDKSLRVVADHIRSCAFLISDGVMPSNEGRGYVLR 303
Query: 346 RLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKR- 404
R+IRRAVR G LG +G L A + + + EL A++Q I+E++ R
Sbjct: 304 RIIRRAVRHGNKLGAQGSFFYKLVAALIEQMGQAYPEL---------AKQQEIIEKVLRI 354
Query: 405 EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAE 464
EE +F +TLERG +L++ L+D G + + G F LYDT+GFP ++T +VA
Sbjct: 355 EEEQFGKTLERGLAILEESLSDL------KGDI--IPGDLVFKLYDTYGFPADLTADVAR 406
Query: 465 EHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTLSAKAIV 524
E +++D +GF+ M QR+ +Q A K D + L T+F GYD+ A V
Sbjct: 407 ERQMTIDHQGFEECMAVQRKTAQ---QAGKFGADYNDQLKSD-KHTDFKGYDSTHYSATV 462
Query: 525 ESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDV 584
+ G+ V + G V+L+RTPFYAESGGQ GD G + V G T +
Sbjct: 463 VEIFAGGEAVQLLEDGQQGIVVLDRTPFYAESGGQTGDTGTITVAGGEFNVTNTTK---- 518
Query: 585 KKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETS 644
LG+ F H GT+ +G + V +V+A +D R K +HTATH+L AL++++G
Sbjct: 519 ---LGNAFAHHGTV-QGRIGVNDKVDATIDDTRRDSIKKNHTATHILHEALRQLLGDHVG 574
Query: 645 QAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIA 704
Q GSLV DRLRFDF+ + EL EIER++N I L T++MA+DDAK GA+A
Sbjct: 575 QKGSLVQPDRLRFDFSHFEAVTKDELREIERVVNDEIRRNFALNTELMAIDDAKAKGAMA 634
Query: 705 MFGEKYGEQVKI 716
+FGEKY ++V++
Sbjct: 635 LFGEKYDDEVRV 646
>gi|429218725|ref|YP_007180369.1| alanine--tRNA ligase [Deinococcus peraridilitoris DSM 19664]
gi|429129588|gb|AFZ66603.1| alanine--tRNA ligase [Deinococcus peraridilitoris DSM 19664]
Length = 901
Score = 555 bits (1431), Expect = e-155, Method: Compositional matrix adjust.
Identities = 311/699 (44%), Positives = 431/699 (61%), Gaps = 48/699 (6%)
Query: 47 PSSGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPR----- 101
PS+ + IR++FL F+ S+GH LPS S + DP+ L T+AGM FKP FLG R
Sbjct: 6 PSTAE-IREKFLQFFESKGHLRLPSHSTLSPDPSTLFTVAGMQPFKPQFLGAAARFPGYE 64
Query: 102 -QVPRAATSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE-- 158
+ R T+Q+ +R D+ENVGRT RH + FEMLGNFSFGDYFK+EAI WAWE T
Sbjct: 65 GEHKRVTTAQKSLRVTDIENVGRTRRHLSLFEMLGNFSFGDYFKREAITWAWELLTAPQY 124
Query: 159 FGLPANRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNS-----GATGPCGPC 213
F L +L +++Y+DD EAFE+W +EVG+P E I R AD+NFW + G GPCGPC
Sbjct: 125 FALDKTKLHVTIYKDDQEAFELWTQEVGLPEERILRFDADENFWPADAPLKGPNGPCGPC 184
Query: 214 SEIYYDFHPDRGCSD----VDLGDDTRFIEFYNLVFMQYNKKD---DGS--LEPLKQKNI 264
SEIYYD PD G + RF+E +NLVF QY++++ DG+ L L KNI
Sbjct: 185 SEIYYDRGPDFGSDSWEDYAQTRESARFLEIWNLVFPQYDRQEPRPDGTPVLADLPFKNI 244
Query: 265 DTGLGLERIARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRA 324
DTG+GLERIA ILQ VP+ Y TD PII++ +EL+ +Y T+++ ++I +HLR+
Sbjct: 245 DTGMGLERIASILQDVPDFYGTDTFRPIIERVAELSGQAY---QGETSVSHRVIAEHLRS 301
Query: 325 IVYLLSDGVFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELS 384
+ L+DGV SN GRGYVVR+++RRA R LLG + +L + ++ E EL
Sbjct: 302 VSMCLADGVTLSNTGRGYVVRKVLRRASRHAYLLGFREPVLHSLVALVVAAMGEAYPEL- 360
Query: 385 THIDSDVKAREQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQD 444
K E ++ +K EE RF+ TLE G + LD ML E G L+G +
Sbjct: 361 -------KQNEAQVQGAIKAEEARFLATLESGTQRLDAMLGKL-----EKGQT--LNGAE 406
Query: 445 AFLLYDTFGFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSV-DDSADL 503
AF++ DT+GFP+++T+E+AEE+GVSVD GFD +E Q+ +++AA K + + D+
Sbjct: 407 AFMMSDTYGFPLDLTREIAEEYGVSVDEAGFDKALEEQQERARAASRYGKSELFGEVQDV 466
Query: 504 AEKI----PDTEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQ 559
E + TEF+GY+ L + V +++ G+ + K+ GS+ +V+L+RTPFYAE GG+
Sbjct: 467 LENVVREHGATEFVGYEELVTEGEVLAVVQGGESLSKLPGGSEAQVVLSRTPFYAEGGGE 526
Query: 560 IGDYGFLYVTQGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQ 619
+GD G+L QG V+D +K+ + +H + EG L VG V +V P RQ
Sbjct: 527 VGDQGWLE-WQGEGNSAGRAFVRDTRKTPQGLHLHDVIVEEGELHVGARVRGVVAPD-RQ 584
Query: 620 RAKVHHTATHLLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLING 679
+ HHTATHLL AAL+ V+G QAGSLVA DRLRFDF+ L EL E+ERL+N
Sbjct: 585 ATERHHTATHLLHAALRAVLGSGVRQAGSLVAPDRLRFDFSHGAALTAEELREVERLVNR 644
Query: 680 WIGDANLLQTKVMALDDAKRAGAIAMFGEKYGEQVKISS 718
WI + MA+D A+ AGA+A+FGEKYG+ V++ S
Sbjct: 645 WIQADFPVTYASMAIDQARAAGAMALFGEKYGDVVRVVS 683
>gi|414072850|ref|ZP_11408766.1| alanyl-tRNA synthetase [Pseudoalteromonas sp. Bsw20308]
gi|410804722|gb|EKS10771.1| alanyl-tRNA synthetase [Pseudoalteromonas sp. Bsw20308]
Length = 866
Score = 555 bits (1431), Expect = e-155, Method: Compositional matrix adjust.
Identities = 301/672 (44%), Positives = 423/672 (62%), Gaps = 42/672 (6%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR++FLDF+AS+ H+++PS+SL+P D T+L AGM+QFK +FLG R RA +SQR
Sbjct: 9 IRQQFLDFFASKQHQIVPSSSLIPGNDATLLFNNAGMVQFKDVFLGAESRPYTRATSSQR 68
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI++AWEF T LP +L
Sbjct: 69 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAIKFAWEFLTEVVSLPKEKLL 128
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDF--HPDRG 225
+++Y DD+EAF W E+G+P + I R+ DNFW+ G TGPCGPCSEI+YD H G
Sbjct: 129 VTIYHDDEEAFGYWANEIGLPEDRIIRIATSDNFWSMGDTGPCGPCSEIFYDHGEHIWGG 188
Query: 226 CSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYE 285
D RFIE +NLVFMQYN++ DG++ PL ++++DTG+GLERI+ ILQ V +NYE
Sbjct: 189 PPGTPEEDGDRFIEIWNLVFMQYNRQSDGTMLPLPKQSVDTGMGLERISAILQGVHSNYE 248
Query: 286 TDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVR 345
DL +I A+ + N + D + +L+++ DH+R+ +L+SDGV PSN GRGYV+R
Sbjct: 249 IDLFQGLIAAAASVTN-----AQDMDDKSLRVVADHIRSCAFLISDGVMPSNEGRGYVLR 303
Query: 346 RLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKR- 404
R+IRRAVR G LG +G L A + + + EL A++Q I+E++ R
Sbjct: 304 RIIRRAVRHGNKLGAQGSFFYKLVAALIEQMGQAYPEL---------AKQQEIIEKVLRI 354
Query: 405 EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAE 464
EE +F +TLERG +L++ L+D G + + G F LYDT+GFP ++T +VA
Sbjct: 355 EEEQFGKTLERGLAILEESLSDL------KGDI--IPGDLVFKLYDTYGFPADLTADVAR 406
Query: 465 EHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTLSAKAIV 524
E +++D +GF+ M QR+ +Q A K D + L T+F GYD+ A V
Sbjct: 407 ERQMTIDHQGFEECMAVQRKTAQ---QAGKFGADYNDQLKSD-KHTDFKGYDSTHYSATV 462
Query: 525 ESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDV 584
+ G+ V + G V+L+RTPFYAESGGQ GD G + V G T +
Sbjct: 463 IEIFAGGEAVQLLEDGQQGIVVLDRTPFYAESGGQTGDTGTITVAGGEFNVTNTTK---- 518
Query: 585 KKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETS 644
LG+ F H GT+ +G + V +V+A +D R K +HTATH+L AL++++G
Sbjct: 519 ---LGNAFAHHGTV-QGRIGVNDKVDATIDDARRDSIKKNHTATHILHEALRQLLGDHVG 574
Query: 645 QAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIA 704
Q GSLV DRLRFDF+ + EL EIER++N I L T++MA+DDAK GA+A
Sbjct: 575 QKGSLVQPDRLRFDFSHFEAVTKDELREIERVVNDEIRRNFALNTELMAIDDAKAKGAMA 634
Query: 705 MFGEKYGEQVKI 716
+FGEKY ++V++
Sbjct: 635 LFGEKYDDEVRV 646
>gi|52842026|ref|YP_095825.1| alanyl-tRNA synthetase [Legionella pneumophila subsp. pneumophila
str. Philadelphia 1]
gi|148359345|ref|YP_001250552.1| alanyl tRNA synthetase [Legionella pneumophila str. Corby]
gi|296107392|ref|YP_003619092.1| alanyl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy]
gi|378777661|ref|YP_005186099.1| alanyl tRNA synthetase [Legionella pneumophila subsp. pneumophila
ATCC 43290]
gi|59798497|sp|Q5ZUJ9.1|SYA_LEGPH RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|205830130|sp|A5ICV6.1|SYA_LEGPC RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|52629137|gb|AAU27878.1| alanyl tRNA synthetase [Legionella pneumophila subsp. pneumophila
str. Philadelphia 1]
gi|148281118|gb|ABQ55206.1| alanyl tRNA synthetase [Legionella pneumophila str. Corby]
gi|295649293|gb|ADG25140.1| alanyl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy]
gi|307610501|emb|CBX00082.1| alanyl-tRNA synthetase [Legionella pneumophila 130b]
gi|364508476|gb|AEW52000.1| alanyl tRNA synthetase [Legionella pneumophila subsp. pneumophila
ATCC 43290]
Length = 860
Score = 555 bits (1431), Expect = e-155, Method: Compositional matrix adjust.
Identities = 307/676 (45%), Positives = 433/676 (64%), Gaps = 45/676 (6%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FL+++ RGH+++ S+SLVP DPT+L T AGM+QFK +FLG R RAAT+QR
Sbjct: 6 IRQAFLNYFVQRGHQIVASSSLVPSNDPTLLFTNAGMVQFKDLFLGLETRSYQRAATAQR 65
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK+EAIQ+AWEF T +PA RLW
Sbjct: 66 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKREAIQYAWEFLTEVLHIPAERLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPD---- 223
++VY++D EA +IW KE+ V E R G DNFW+ G TGPCGPC+EI+YD P+
Sbjct: 126 VTVYKEDLEAEDIWLKEMKVSPERFSRCGEKDNFWSMGDTGPCGPCTEIFYDHGPEVAGG 185
Query: 224 -RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPN 282
G D D GD R+IE +NLVFMQ+N+ +G L PL + ++DTG+GLER+A ++Q V +
Sbjct: 186 PPGSPDED-GD--RYIEIWNLVFMQFNRDREGHLHPLPKPSVDTGMGLERLAAVIQGVHS 242
Query: 283 NYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGY 342
NYE D +IK ++L Q D + +LK+I DH+R+ +L+ DGV PSN GRGY
Sbjct: 243 NYEIDSFQYLIKAIAQL-----GQDIDLNHTSLKVIADHIRSCSFLIVDGVLPSNEGRGY 297
Query: 343 VVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEEL 402
V+RR+IRRAVR G LG+ L + + + EL I+S KA +RIL++
Sbjct: 298 VLRRIIRRAVRHGNKLGLPSPFFSKLVQPLIDVMGDAYPEL---INS--KAHIERILQQ- 351
Query: 403 KREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEV 462
EE +F +TLE+G +LL + + + LSG+ AF LYDT+GFP+++T ++
Sbjct: 352 --EENQFTRTLEQGLRLLQDHIKNLQGQ--------ELSGEVAFKLYDTYGFPIDLTADI 401
Query: 463 AEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTLSAKA 522
E G+ +DM+ F+ M+ QR QSQAA + + D A +++ +EF GY+ S +A
Sbjct: 402 IREQGLHIDMEAFNQLMQQQREQSQAAS---QFTTDYHA-VSQLDHQSEFHGYEKESMEA 457
Query: 523 IVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVK 582
+ LL G V ++KG+ V+L+ TPFYAESGGQ+GD G L + T Q V
Sbjct: 458 KIIGLLQEGNEVKSINKGAKGAVILDHTPFYAESGGQVGDKGLLIGKEFTFQ------VD 511
Query: 583 DVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQE 642
D +K +G VH G + +G L + + A VD R +++HTATHLL AALKK++GQ
Sbjct: 512 DTQK-VGQAVVHYGKVIKGELTLDLLIHAQVDNIRRDAIRLNHTATHLLHAALKKIVGQH 570
Query: 643 TSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGA 702
Q GSLV +R RFDF+ L ++++IE ++N I N + T+VM ++ AK++GA
Sbjct: 571 VQQRGSLVDAERARFDFSHFEALTPQQIQQIEEVVNAQIRANNEVITQVMDIESAKQSGA 630
Query: 703 IAMFGEKYGEQVKISS 718
+A+FGEKY + V++ S
Sbjct: 631 VALFGEKYSDAVRVLS 646
>gi|392536410|ref|ZP_10283547.1| alanyl-tRNA ligase [Pseudoalteromonas arctica A 37-1-2]
Length = 863
Score = 555 bits (1431), Expect = e-155, Method: Compositional matrix adjust.
Identities = 301/672 (44%), Positives = 423/672 (62%), Gaps = 42/672 (6%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR++FLDF+AS+ H+++PS+SL+P D T+L AGM+QFK +FLG R RA +SQR
Sbjct: 6 IRQQFLDFFASKQHQIVPSSSLIPGNDATLLFNNAGMVQFKDVFLGAESRPYTRATSSQR 65
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI++AWEF T LP +L
Sbjct: 66 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAIKFAWEFLTEVVSLPKEKLL 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDF--HPDRG 225
+++Y DD+EAF W E+G+P + I R+ DNFW+ G TGPCGPCSEI+YD H G
Sbjct: 126 VTIYHDDEEAFGYWANEIGLPEDRIIRIATSDNFWSMGDTGPCGPCSEIFYDHGEHIWGG 185
Query: 226 CSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYE 285
D RFIE +NLVFMQYN++ DG++ PL ++++DTG+GLERI+ ILQ V +NYE
Sbjct: 186 PPGSPEEDGDRFIEIWNLVFMQYNRQSDGTMLPLPKQSVDTGMGLERISAILQGVHSNYE 245
Query: 286 TDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVR 345
DL +I A+ + N + D + +L+++ DH+R+ +L+SDGV PSN GRGYV+R
Sbjct: 246 IDLFQGLIAAAASVTN-----AQDMDDKSLRVVADHIRSCAFLISDGVMPSNEGRGYVLR 300
Query: 346 RLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKR- 404
R+IRRAVR G LG +G L A + + + EL A++Q I+E++ R
Sbjct: 301 RIIRRAVRHGNKLGAQGSFFYKLVAALIEQMGQAYPEL---------AKQQEIIEKVLRI 351
Query: 405 EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAE 464
EE +F +TLERG +L++ L+D G + + G F LYDT+GFP ++T +VA
Sbjct: 352 EEEQFGKTLERGLAILEESLSDL------KGDI--IPGDLVFKLYDTYGFPADLTADVAR 403
Query: 465 EHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTLSAKAIV 524
E +++D +GF+ M QR+ +Q A K D + L T+F GYD+ A V
Sbjct: 404 ERQMTIDHQGFEECMAVQRKTAQ---QAGKFGADYNDQLKSD-KHTDFKGYDSTHYSATV 459
Query: 525 ESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDV 584
+ G+ V + G V+L+RTPFYAESGGQ GD G + V G T +
Sbjct: 460 IEIFAGGEAVQLLEDGQQGIVVLDRTPFYAESGGQTGDTGTITVAGGEFNVTNTTK---- 515
Query: 585 KKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETS 644
LG+ F H GT+ +G + V +V+A +D R K +HTATH+L AL++++G
Sbjct: 516 ---LGNAFAHHGTV-QGRIGVNDKVDATIDDTRRDSIKKNHTATHILHEALRQLLGDHVG 571
Query: 645 QAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIA 704
Q GSLV DRLRFDF+ + EL EIER++N I L T++MA+DDAK GA+A
Sbjct: 572 QKGSLVQPDRLRFDFSHFEAVTKDELREIERVVNDEIRRNFALNTELMAIDDAKAKGAMA 631
Query: 705 MFGEKYGEQVKI 716
+FGEKY ++V++
Sbjct: 632 LFGEKYDDEVRV 643
>gi|440733057|ref|ZP_20912834.1| alanyl-tRNA ligase [Xanthomonas translucens DAR61454]
gi|440364859|gb|ELQ01980.1| alanyl-tRNA ligase [Xanthomonas translucens DAR61454]
Length = 882
Score = 555 bits (1431), Expect = e-155, Method: Compositional matrix adjust.
Identities = 312/683 (45%), Positives = 425/683 (62%), Gaps = 44/683 (6%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S IR FL+F+ +GH ++PSA LVP DPT+L T +GM+QFK +FLG R RAA
Sbjct: 8 STSQIRSDFLEFFNGKGHTIVPSAPLVPGNDPTLLFTNSGMVQFKDVFLGAEKRSYVRAA 67
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
QRC+R ND++ VG T+RHHTFFEMLGN+SFGDYFKKEAI WAWE T + LPA
Sbjct: 68 DVQRCLRAGGKHNDLDAVGYTARHHTFFEMLGNWSFGDYFKKEAIAWAWELLTQVWKLPA 127
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEI 216
RL ++VY D++A+E+W +GVP E I R+G A DNFW TGPCGPC+EI
Sbjct: 128 ERLLVTVYHTDEQAYELWRDMIGVPPERIVRIGDNKGAPYASDNFWQMADTGPCGPCTEI 187
Query: 217 YYDF--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIA 274
+YD H G D RFIE +NLVFMQ++++ DG+L PL +DTG+GLER+A
Sbjct: 188 FYDHGAHIAGGPPGSPDEDGDRFIEIWNLVFMQFDRQSDGTLVPLPAPCVDTGMGLERLA 247
Query: 275 RILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVF 334
ILQ V +NYE DL +I+ AS+L ++ D N +L++I DH+RA +L+ DGV
Sbjct: 248 AILQHVHSNYEIDLFQTLIRHASQLTGMA-----DLENKSLRVIADHIRACSFLIVDGVL 302
Query: 335 PSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAR 394
PSN GRGYV+RR+IRRA+R G +LG++ F +A +L ++ A
Sbjct: 303 PSNEGRGYVLRRIIRRALRHGWMLGVR--------QPFFHKMAATLSDLMGQAYPELPAG 354
Query: 395 EQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGF 454
+ L+ EE RF +TL+ G K+ D++ A R SGS+P G DAF LYDT+GF
Sbjct: 355 LSTVQRALQAEEERFAETLDSGMKIFDEIAA------RASGSIP---GADAFRLYDTYGF 405
Query: 455 PVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLG 514
PV++T ++A E G+ VDM GF+ ME QR ++AA ADL ++ T FLG
Sbjct: 406 PVDLTADIARERGMDVDMAGFESAMERQRETARAA-GKFGGGTTLPADLVAQLVPTVFLG 464
Query: 515 YDTLSAKAI-VESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTN 573
YD L A A+ V +LL +G+PV + G VLL+RTPFYAESGGQ+GD G L +
Sbjct: 465 YDALQADALKVVALLKDGRPVESIEAGDAAIVLLDRTPFYAESGGQVGDLGQL------S 518
Query: 574 QQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQA 633
+ + +V++ +K G H G +R G L+VG + A VD R ++H+ATHLL A
Sbjct: 519 ADSVLFQVEETQKFAGQFHGHVGQLRSGRLQVGATLSAQVDSDRRGATILNHSATHLLHA 578
Query: 634 ALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMA 693
AL++V+G Q GSLVA DRLRFDF+ +P+ EL IER +N + + ++ M
Sbjct: 579 ALREVLGTHVQQKGSLVAPDRLRFDFSHFQPMSAAELAVIERKVNAQVRANHAVEVHHMG 638
Query: 694 LDDAKRAGAIAMFGEKYGEQVKI 716
+ +A GA+A+FGEKYGE+V++
Sbjct: 639 MQEALDFGAMALFGEKYGERVRV 661
>gi|120598090|ref|YP_962664.1| alanyl-tRNA synthetase [Shewanella sp. W3-18-1]
gi|146293839|ref|YP_001184263.1| alanyl-tRNA synthetase [Shewanella putrefaciens CN-32]
gi|120558183|gb|ABM24110.1| alanyl-tRNA synthetase [Shewanella sp. W3-18-1]
gi|145565529|gb|ABP76464.1| alanyl-tRNA synthetase [Shewanella putrefaciens CN-32]
Length = 892
Score = 555 bits (1431), Expect = e-155, Method: Compositional matrix adjust.
Identities = 313/683 (45%), Positives = 427/683 (62%), Gaps = 56/683 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
+R FL+F+ S GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 26 LRSAFLEFFRSHGHQVVDSSSLVPGNDPTLLFTNAGMNQFKDVFLGMDKRNYTRATTAQR 85
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
C+R ND++NVG T+RHHTFFEMLGNFSFGDYFK+EAI + W F T LP RL
Sbjct: 86 CVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKEEAICFGWSFLTETLKLPKERLC 145
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYYDF 220
+++Y+ DDEAFEIWNK++GV E+I R+G A DNFW G TGPCGPC+EI+YD
Sbjct: 146 VTIYQTDDEAFEIWNKKIGVAAENIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFYD- 204
Query: 221 HPD-----RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
H D R S + GD RFIE +N+VFMQYN+ G + PL + ++DTG+G+ERIA
Sbjct: 205 HGDHIWGGRPGSPEEDGD--RFIEIWNIVFMQYNRHISGEMLPLPKPSVDTGMGIERIAA 262
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
I+Q V +NYE D+ +I KA+E+ V+ D +N +L++I DH+R+ +L++DGV P
Sbjct: 263 IMQGVHSNYEIDIFRALIAKAAEIIGVT-----DLSNKSLRVIADHIRSCAFLVADGVMP 317
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN GRGYV+RR+IRRAVR G LG AF + I++ + A
Sbjct: 318 SNEGRGYVLRRIIRRAVRHGNKLGAT--------EAFFYKLVPTLIDVMGDAAKGL-AET 368
Query: 396 QRILEE-LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGF 454
Q I+E+ LK EE +F +TLERG +LD L++ T L G+ F LYDT+GF
Sbjct: 369 QVIVEKALKAEEEQFARTLERGLGILDAALSELTGDT--------LDGETVFKLYDTYGF 420
Query: 455 PVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKI-PDTEFL 513
P+++T +V E + VD GF+ M QR ++QAA N D +A L KI +T F
Sbjct: 421 PMDLTADVCRERNIIVDEAGFEAAMAEQRSRAQAAGN---FGADYNAAL--KIDAETAFC 475
Query: 514 GYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTN 573
GY L +A V ++ NG+ V + G + ++L+ TPFYAESGGQ+GD G L V G
Sbjct: 476 GYTELVGQAKVTAIYQNGESVTAIKAGDEAVLVLDVTPFYAESGGQVGDKGQL-VANGIE 534
Query: 574 QQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQA 633
V D +K G H+G + G L +G+ VEA VD KLR R +++H+ THLL A
Sbjct: 535 -----FTVNDTQK-YGQATGHQGVLVAGSLSIGQMVEAKVDKKLRHRTQLNHSVTHLLHA 588
Query: 634 ALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMA 693
AL++V+G +Q GSLV +RLRFDF+ + EL+++E L+N I + L+ MA
Sbjct: 589 ALRQVLGTHVTQKGSLVDPERLRFDFSHFEAVKPAELKKVEELVNTQIRRNHELKVAEMA 648
Query: 694 LDDAKRAGAIAMFGEKYGEQVKI 716
+D+AK GA+A+FGEKY QV++
Sbjct: 649 IDEAKEKGAMALFGEKYDAQVRV 671
>gi|85715195|ref|ZP_01046179.1| alanyl-tRNA synthetase [Nitrobacter sp. Nb-311A]
gi|85698110|gb|EAQ35983.1| alanyl-tRNA synthetase [Nitrobacter sp. Nb-311A]
Length = 892
Score = 555 bits (1431), Expect = e-155, Method: Compositional matrix adjust.
Identities = 304/682 (44%), Positives = 425/682 (62%), Gaps = 43/682 (6%)
Query: 51 DSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATS 109
+ IR FL+F+A+ H+++PS+ LVP DPT++ T AGM+QFK +F G R RA TS
Sbjct: 5 NDIRSAFLNFFAANDHQIVPSSPLVPRNDPTLMFTNAGMVQFKNVFTGVEKRSYQRATTS 64
Query: 110 QRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANR 165
Q+C+R ND++NVG T+RHHTFFEMLGNFSFGDYFK AI+ AW+ T EFGLP +R
Sbjct: 65 QKCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKDRAIELAWKLVTQEFGLPKDR 124
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDR- 224
L +VY DDDEAF++W K G+P I R+ DNFW G TGPCGPCSEI+YD H DR
Sbjct: 125 LTATVYIDDDEAFDLWKKIAGLPESRIIRIAGADNFWQMGDTGPCGPCSEIFYD-HGDRI 183
Query: 225 -----GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQK 279
G D D GD RF+E +NLVFMQY K DGS L + +IDTG GLER+A +LQ
Sbjct: 184 PGGPPGSPDED-GD--RFVEIWNLVFMQYEKLSDGSRPNLPKPSIDTGAGLERVAAVLQG 240
Query: 280 VPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIG 339
+NY+ DL +I+ A++L A +L++I DHLRA +L++DGV PSN G
Sbjct: 241 KHDNYDIDLFVALIRAAADLTG---ADPQGPMKASLRVIADHLRASSFLIADGVLPSNEG 297
Query: 340 RGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRIL 399
RGYV+RR++RRA+R +LLG + L G + + E EL R + ++
Sbjct: 298 RGYVLRRIMRRAMRHAQLLGAREPLMWRLVGVLVREMGEAYPELQ---------RARSLI 348
Query: 400 EE-LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEI 458
EE L+ EE RF +TL+RG +LD+ S + + G + G+ AF LYDT+GFP+++
Sbjct: 349 EETLRLEETRFRKTLDRGLSILDEK-----SASLKKGDM--FDGETAFTLYDTYGFPLDL 401
Query: 459 TKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSA--DLAEKIPDTEFLGYD 516
T++ G+ VD+ F ME Q+ +++A+ + + +S L EK+ TEFLGY+
Sbjct: 402 TQDALRARGIGVDLASFTDAMEQQKAKARASWSGSGEAAAESIWFPLREKLGATEFLGYE 461
Query: 517 TLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQT 576
T SA+ +V +L+ +GK + G ++LN+TPFY ESGGQ+GD G L
Sbjct: 462 TESAEGVVVALVQDGKETDILKAGESGAIVLNQTPFYGESGGQVGDTGAL------TADG 515
Query: 577 AVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALK 636
V D +K G +FVH G + +GVL G + VD R + +H+ATHLL AL+
Sbjct: 516 VCFRVTDTQKKAGDLFVHLGIVEQGVLAPGMALALEVDHDRRAAIRANHSATHLLHEALR 575
Query: 637 KVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDD 696
+V+G +Q GSLVA +RLRFDF ++P+ EL IE + N + + + T++MA+DD
Sbjct: 576 QVLGDHIAQRGSLVAPERLRFDFAHNKPISGDELRRIEDIANDVVLENGEVTTRLMAVDD 635
Query: 697 AKRAGAIAMFGEKYGEQVKISS 718
A+ AGA A+FGEKYG++V++ S
Sbjct: 636 AREAGARALFGEKYGDEVRVVS 657
>gi|261346225|ref|ZP_05973869.1| alanine--tRNA ligase [Providencia rustigianii DSM 4541]
gi|282565533|gb|EFB71068.1| alanine--tRNA ligase [Providencia rustigianii DSM 4541]
Length = 875
Score = 555 bits (1431), Expect = e-155, Method: Compositional matrix adjust.
Identities = 310/690 (44%), Positives = 434/690 (62%), Gaps = 64/690 (9%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ ++GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 8 IRQAFLDFFHTKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRAYSRATTAQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AI++AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIRFAWELLTSEQWFNLPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VY DDEA++IWNKE+GVP E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYATDDEAYDIWNKEIGVPAERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +NLVFMQ+N++ DG++EPL + ++DTG+GLERI+
Sbjct: 188 D-HGDHIWGGPPGTPEEDGDRYIEIWNLVFMQFNRQSDGTMEPLPKPSVDTGMGLERISA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ D+ +I A+ + D +N +L++I DH+R+ +L+SDGV P
Sbjct: 247 VLQHVNSNYDIDIFRELIAAAA-----EATGATDLSNKSLRVIADHIRSCAFLISDGVIP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN GRGYV+RR+IRRAVR G +LG K L + + A EL R+
Sbjct: 302 SNEGRGYVLRRIIRRAVRHGYMLGAKDTFFYKLVPTLIKVMGTAADELQ---------RQ 352
Query: 396 QRILEE-LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGF 454
Q ++E+ LK EE +F +TLERG +LLD LA T L G+ AF LYDT+GF
Sbjct: 353 QAMVEKVLKTEEEQFARTLERGLQLLDDELASLKGDT--------LEGETAFRLYDTYGF 404
Query: 455 PVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQ------AAHNAVKLSVDDSADLAEKIP 508
P+++T +V E + VD +GF+ ME+QRR+++ A +NA+ + VD
Sbjct: 405 PLDLTADVCRERNIKVDEEGFERAMEDQRRRARESSGFGADYNAL-IKVDKR-------- 455
Query: 509 DTEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYV 568
+EF GY +A + +L +G+PV ++ G + V+L++T FYAESGGQ+GD G L
Sbjct: 456 -SEFSGYQHDEQQATITALYKDGQPVDALNAGEEGLVILDKTAFYAESGGQVGDTGVL-- 512
Query: 569 TQGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTAT 628
TN+ V V D +K G H G + G L V + A V+ + R +++H+AT
Sbjct: 513 ---TNESGNFV-VLDTQK-YGQAIGHVGKVESGSLVVNHRISARVNSERRNAIRLNHSAT 567
Query: 629 HLLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQ 688
HLL AAL++++G+ SQ GSLV LRFDF+ L +L ++E ++N I + ++
Sbjct: 568 HLLHAALRQILGEHVSQKGSLVNDKYLRFDFSHFEALTQQQLRQVEDIVNAQIRQNSEIE 627
Query: 689 TKVMALDDAKRAGAIAMFGEKYGEQVKISS 718
T++M L+ AK GA+A+FGEKY E+V++ S
Sbjct: 628 TELMDLEGAKAKGAMALFGEKYEERVRVLS 657
>gi|226952658|ref|ZP_03823122.1| alanyl-tRNA synthetase [Acinetobacter sp. ATCC 27244]
gi|226836595|gb|EEH68978.1| alanyl-tRNA synthetase [Acinetobacter sp. ATCC 27244]
Length = 884
Score = 555 bits (1430), Expect = e-155, Method: Compositional matrix adjust.
Identities = 306/693 (44%), Positives = 436/693 (62%), Gaps = 51/693 (7%)
Query: 43 SQDFPSSGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPR 101
S F +S + IR+ FL ++ S+GH + S+SLVP DPT+L T AGM QFK FLG R
Sbjct: 4 STRFMTSAE-IREAFLRYFESQGHTRVASSSLVPANDPTLLFTNAGMNQFKDCFLGLEKR 62
Query: 102 QVPRAATSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTV 157
RA +SQ+C+R ND++NVG T+RHHTFFEMLGNFSFGDYFK+ A+++AWEF T
Sbjct: 63 DYVRAVSSQKCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKQNALKFAWEFLTS 122
Query: 158 E--FGLPANRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATG 208
E GLP +RL+++VY DDEAF+IWNKE+GV E I R+G A DNFW G TG
Sbjct: 123 EQWLGLPKDRLYVTVYHTDDEAFDIWNKEIGVDAERIIRIGDNKGGQYASDNFWAMGDTG 182
Query: 209 PCGPCSEIYYDFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNID 265
PCGPCSEI+YD H D G D RFIE +N VFMQ+N+ DG + PL ++D
Sbjct: 183 PCGPCSEIFYD-HGDHIWGGLPGTPEEDGDRFIEIWNNVFMQFNRTADGVMHPLPAPSVD 241
Query: 266 TGLGLERIARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAI 325
TG+GLERI+ +LQ V +NYE DL ++K A+ + + D +L+++ DH R+
Sbjct: 242 TGMGLERISAVLQHVNSNYEIDLFQHLLKAAANIIGIE-----DEGQPSLRVVADHARSC 296
Query: 326 VYLLSDGVFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELST 385
+L++DGV PSN GRGYV+RR+IRRAVR G LG G F + + IE+
Sbjct: 297 CFLIADGVNPSNEGRGYVLRRIIRRAVRHGNKLGATG--------TFFYKMLQPLIEVMG 348
Query: 386 HIDSDVKAREQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDA 445
++ AR+ I L REE +F +TLE+G KLL+ LA + G+V ++G+
Sbjct: 349 EAYPELAARKDVIEATLIREEEQFAKTLEQGLKLLEGELA------QLKGNV--IAGETV 400
Query: 446 FLLYDTFGFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAE 505
F LYDT+GFP ++T ++A E +++D GF++EM QR Q A +A K +VD ++ + +
Sbjct: 401 FKLYDTYGFPTDLTADIARERDLTIDEAGFEVEMAAQR---QRARDAGKFAVDYNS-IVK 456
Query: 506 KIPDTEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGF 565
+T+F GYD + + ++ +G V ++++G + ++LN+TPFYAESGGQIGD G
Sbjct: 457 VEGETQFDGYDATHGQGQIVAIYKDGIQVDEINEGDEALIVLNQTPFYAESGGQIGDTGI 516
Query: 566 LYVTQGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHH 625
T + EV+D KKS G FVH+G + G L+ + VEA V +R +H
Sbjct: 517 F------KNDTGIFEVQDTKKS-GGAFVHQGIVTVGSLKATQSVEATVKADIRAATARNH 569
Query: 626 TATHLLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDAN 685
+ATHLL AAL++++G Q GSLVA D LRFDF +P+ +L++IERL+N +
Sbjct: 570 SATHLLHAALRQILGDHVQQKGSLVASDILRFDFANDQPVTFDQLQQIERLVNAEVLANT 629
Query: 686 LLQTKVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+ T+++ ++ AK GA+ +FGEKYG++V++ S
Sbjct: 630 PVTTELLDIETAKAKGAMMLFGEKYGDEVRVLS 662
>gi|343493959|ref|ZP_08732243.1| alanyl-tRNA synthetase [Vibrio nigripulchritudo ATCC 27043]
gi|342825600|gb|EGU60077.1| alanyl-tRNA synthetase [Vibrio nigripulchritudo ATCC 27043]
Length = 860
Score = 555 bits (1430), Expect = e-155, Method: Compositional matrix adjust.
Identities = 310/686 (45%), Positives = 422/686 (61%), Gaps = 53/686 (7%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S D +R FL F+ S+GH+++ S+SLVP DPT+L T AGM QFK FLG R RA
Sbjct: 4 STDEVRNAFLKFFESKGHQIVDSSSLVPHNDPTLLFTNAGMNQFKDCFLGLEKRAYTRAT 63
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
T+QRC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI +AWEF T LP
Sbjct: 64 TAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAISFAWEFLTEVLQLPK 123
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG--------ADDNFWNSGATGPCGPCSE 215
+RL ++VYE DDEAF+IWNK+VGVP + I R+G DNFW G TGPCGPC+E
Sbjct: 124 DRLLVTVYETDDEAFDIWNKKVGVPADRIVRIGDKEGGKPYESDNFWQMGDTGPCGPCTE 183
Query: 216 IYYDFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLER 272
I+YD H D G D RFIE +N VFMQ+N+ DG++EPL + ++DTG+G+ER
Sbjct: 184 IFYD-HGDHIWGGRPGTPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPSVDTGMGIER 242
Query: 273 IARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDG 332
I+ I+Q V +NYE D+ +IK A+E+ D +N +L+++ DH+R+ +L+ DG
Sbjct: 243 ISAIMQGVHSNYEIDVFQTLIKAAAEVTG-----HEDLSNQSLRVVADHIRSCAFLIVDG 297
Query: 333 VFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVK 392
V PSN GRGYV+RR+IRRAVR G LG +G L G + +EL
Sbjct: 298 VMPSNEGRGYVLRRIIRRAVRHGNKLGAQGAFFHKLVGVLAEVMGTAGVELK-------- 349
Query: 393 AREQRILEELKR-EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDT 451
++Q ++E++ R EE F +TLERG +L++ L D L G V L G+ F LYDT
Sbjct: 350 -KQQALVEKVLRIEEENFGRTLERGMSILNEAL-DGL-----EGKV--LDGETVFKLYDT 400
Query: 452 FGFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKI-PDT 510
+GFP ++T +VA E ++D +GF+ ME QR Q A A + D +A A K+ T
Sbjct: 401 YGFPADLTNDVARERDFAIDEEGFEKAMEAQR---QRAREAGQFGTDYNA--AIKVDAST 455
Query: 511 EFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQ 570
EF GY + + V +L V G V +S G V+L TPFY ESGGQ GD G L
Sbjct: 456 EFCGYTSTEGSSTVSALFVEGNEVEALSAGDKAIVILEETPFYGESGGQCGDTGTLKTDA 515
Query: 571 GTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHL 630
G + +V+D +K L + H G + EGV G V A VD R ++H+ATHL
Sbjct: 516 G------LFQVEDTQK-LNNAVAHHGVLVEGVFAKGDSVAATVDAARRAAIILNHSATHL 568
Query: 631 LQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTK 690
L AAL+ V+G +Q GSLV + LRFDF+ + E++E+ERL+N + + +QT
Sbjct: 569 LHAALRHVLGDHVAQKGSLVKAEGLRFDFSHLEAMTPAEIKEVERLVNIHVRRNHNIQTD 628
Query: 691 VMALDDAKRAGAIAMFGEKYGEQVKI 716
+M ++DAK GA+A+FGEKY +QV++
Sbjct: 629 IMNIEDAKAKGAMALFGEKYDDQVRV 654
>gi|326390157|ref|ZP_08211718.1| alanyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
gi|345017550|ref|YP_004819903.1| alanyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
gi|392941104|ref|ZP_10306748.1| alanine--tRNA ligase [Thermoanaerobacter siderophilus SR4]
gi|325993805|gb|EGD52236.1| alanyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
gi|344032893|gb|AEM78619.1| alanyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
gi|392292854|gb|EIW01298.1| alanine--tRNA ligase [Thermoanaerobacter siderophilus SR4]
Length = 877
Score = 555 bits (1430), Expect = e-155, Method: Compositional matrix adjust.
Identities = 309/675 (45%), Positives = 434/675 (64%), Gaps = 36/675 (5%)
Query: 51 DSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATS 109
+ IR++FL F+ S+GH LPS SL+P+ D ++LL +GM KP F GK R T
Sbjct: 7 NEIREKFLSFFESKGHLRLPSFSLIPKNDKSLLLINSGMAPLKPYFTGKETPPSKRVTTC 66
Query: 110 QRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWIS 169
QRCIRT D+E VG+T+RH TFFEMLGNFSFGDYFKKEAI WAWEF T LP +RLW+S
Sbjct: 67 QRCIRTPDIERVGKTARHGTFFEMLGNFSFGDYFKKEAIPWAWEFVTEILKLPVDRLWVS 126
Query: 170 VYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSDV 229
+YE+DDEAFEIWNK VG+P E I RMG +DNFW G TGPCGP SEIY+D ++GC
Sbjct: 127 IYEEDDEAFEIWNKIVGLPPERIVRMGKEDNFWEIG-TGPCGPSSEIYFDRGEEKGCGKP 185
Query: 230 DLG---DDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYET 286
G D RFIEF+NLVF Q+NK + G+ L NIDTG+GLERIA I+Q V + ++
Sbjct: 186 TCGVGCDCDRFIEFWNLVFTQFNKDERGNYHRLPNPNIDTGMGLERIATIMQGVDSIFDV 245
Query: 287 DLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRR 346
D+I I S++A V Y + ++ +++L++I DH+R I +++SDG+ PSN GRGYV+RR
Sbjct: 246 DVIRGITNFVSKIAEVEYGKDAEK-DVSLRVITDHIRGITFMISDGILPSNEGRGYVLRR 304
Query: 347 LIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREE 406
L+RRA R G+LLGI FL + + IE ++ R+ I +K EE
Sbjct: 305 LLRRAARHGKLLGIN--------DTFLYKVVDSVIENYGEAYPEIIERKDYIKRIIKLEE 356
Query: 407 LRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEH 466
RF +T+++G +L D +S + G L G AF LYDT+GFP+++TKE+ +E
Sbjct: 357 ERFKETIDQGL----TILQDYISELKVQGKTV-LEGSKAFKLYDTYGFPLDLTKEILQEA 411
Query: 467 GVSVDMKGFDIEMENQR---RQSQAAHNAVKLSVDDSADLAEKIPD--TEFLGYDTLSAK 521
G++VD +G+ E+E QR R S+ N++ D+ + D T+F+GYDT +
Sbjct: 412 GITVDEEGYTKELEKQRIRARSSRKEDNSLW-----EQDIYSTLGDIKTKFVGYDTYESD 466
Query: 522 AIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEV 581
+ V +++ + + V + G DV ++L+ TPFYAESGGQIGD G L + A+++V
Sbjct: 467 SKVLAIVKDEELVEEAEAGDDVSIILDVTPFYAESGGQIGDKGVL------ENENALIKV 520
Query: 582 KDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQ 641
D KK +G F+H GTI G++ VG EV+A +D R+ A +HTATHLL ALK+++G
Sbjct: 521 NDCKK-IGDKFIHTGTIERGLISVGDEVKAQIDVVSRRNAARNHTATHLLHKALKEILGD 579
Query: 642 ETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAG 701
QAGSLVA DRLRFDF+ ++ + EL++IE +N I + + + D+A + G
Sbjct: 580 HVHQAGSLVADDRLRFDFSHYQAVTKEELKQIENRVNEKIYQSLNVHIEEKTYDEAVKEG 639
Query: 702 AIAMFGEKYGEQVKI 716
A+A+F EKYG++V++
Sbjct: 640 AVALFTEKYGDKVRV 654
>gi|421480412|ref|ZP_15928038.1| alanine--tRNA ligase [Burkholderia multivorans CF2]
gi|400221140|gb|EJO51622.1| alanine--tRNA ligase [Burkholderia multivorans CF2]
Length = 874
Score = 555 bits (1430), Expect = e-155, Method: Compositional matrix adjust.
Identities = 302/679 (44%), Positives = 421/679 (62%), Gaps = 44/679 (6%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR++FL F+ S+GH ++ S+SLVP DPT++ T +GM+QFK +FLG R RA T+QR
Sbjct: 6 IREKFLKFFESKGHTIVRSSSLVPGNDPTLMFTNSGMVQFKDVFLGTDRRPYTRATTAQR 65
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AI++AWE T + LP ++LW
Sbjct: 66 SVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIRFAWELLTTVYMLPKDKLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYYDF 220
++VY++DDEA++IW KEVGVP E I R+G A DNFW G TGPCGPC+EI+YD
Sbjct: 126 VTVYQEDDEAYDIWAKEVGVPTERIIRIGDNKGARYASDNFWTMGDTGPCGPCTEIFYDH 185
Query: 221 HPD--RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQ 278
P+ G D R+IE +NLVFMQ+N+ G++ L + +DTG+GLER+A +LQ
Sbjct: 186 GPEVWGGPPGSPEEDGDRYIEIWNLVFMQFNRDAQGNMTRLPKPCVDTGMGLERLAAVLQ 245
Query: 279 KVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNI 338
V +NYE DL +IK A+ + VS D N +LK+I DH+RA +L+ DGV P N
Sbjct: 246 HVHSNYEIDLFQNLIKAAARVTEVS-----DLNNNSLKVIADHIRACAFLIVDGVIPGNE 300
Query: 339 GRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRI 398
GRGYV+RR++RRA+R G LG K GAF + + ++K EQR+
Sbjct: 301 GRGYVLRRIVRRAIRHGYKLGRK--------GAFFHKLVADLVAEMGAAYPELKEAEQRV 352
Query: 399 LEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEI 458
+ L++EE RF +T+E G +L+ LAD ++ G V L G+ AF L+DT+GFP+++
Sbjct: 353 TDVLRQEEERFFETIEHGMSILESALADLEAK---GGKV--LDGELAFKLHDTYGFPLDL 407
Query: 459 TKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTL 518
T +V E GV+VD FD M QR Q++AA + L T F GY+ +
Sbjct: 408 TADVCRERGVTVDEPAFDDAMARQREQARAAGK-----FKAAQGLEYTGAKTTFHGYEEI 462
Query: 519 S-AKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTA 577
+ A V +L V+G V +V G D V+L+ TPFYAESGGQ+GD G L N T
Sbjct: 463 AFDDAKVVALYVDGSAVTEVKAGQDAVVVLDHTPFYAESGGQVGDQGVL-----ANASTR 517
Query: 578 VVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKK 637
V D K V H GT+ +G L+VG + A +D + R R + +H+ATHL+ AL++
Sbjct: 518 FA-VADTLKVQADVIGHHGTLEQGTLKVGDVLRAEIDAQRRARTQRNHSATHLMHKALRE 576
Query: 638 VIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDA 697
V+G Q GSLV D+ RFDF + PL D E+ +E+++N I +VM D+A
Sbjct: 577 VLGSHVQQKGSLVDADKTRFDFAHNAPLTDDEIRRVEQIVNNEILANAPGIVRVMPYDEA 636
Query: 698 KRAGAIAMFGEKYGEQVKI 716
+ GA+A+FGEKYG++V++
Sbjct: 637 VKGGAMALFGEKYGDEVRV 655
>gi|329938948|ref|ZP_08288322.1| alanyl-tRNA synthetase [Streptomyces griseoaurantiacus M045]
gi|329301833|gb|EGG45726.1| alanyl-tRNA synthetase [Streptomyces griseoaurantiacus M045]
Length = 890
Score = 555 bits (1430), Expect = e-155, Method: Compositional matrix adjust.
Identities = 299/678 (44%), Positives = 423/678 (62%), Gaps = 33/678 (4%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQRC 112
IR+R+L F+ RGH V+PSASL+ +DPT+LL AGM+ FKP FLG+V RA + Q+C
Sbjct: 6 IRRRWLSFFEERGHTVVPSASLIADDPTLLLVPAGMVPFKPYFLGEVKPPFDRATSVQKC 65
Query: 113 IRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE-----FGLPANRLW 167
+RT D+E VG+T+RH TFF+M GNFSFGDYFK+ A + AWE T +GL A +LW
Sbjct: 66 VRTPDIEEVGKTTRHGTFFQMCGNFSFGDYFKEGAAKLAWELLTTPQDKGGYGLEAEKLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCS 227
I+VYE+DDEA IW VGVP E I+R+G DNFW+ G GPCGPCSEI YD P+ G
Sbjct: 126 ITVYEEDDEAERIWRDIVGVPAERIQRLGKKDNFWSMGVPGPCGPCSEINYDRGPEFGVE 185
Query: 228 DVDLGDDTRFIEFYNLVFMQY------NKKDDGSLEPLKQKNIDTGLGLERIARILQKVP 281
+D R++E +NLVFMQY K+D L L KNIDTGLGLER+A ILQ V
Sbjct: 186 GGPAVNDERYVEIWNLVFMQYERGEGIGKEDFEILGDLPSKNIDTGLGLERLAMILQGVQ 245
Query: 282 NNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRG 341
N YE D +I KA+EL V+Y ++D ++++L+++ DH+R V L+ DGV P N GRG
Sbjct: 246 NLYEIDTSMAVIGKATELTGVAYGDAHD-SDVSLRVVTDHMRTSVMLIGDGVTPGNEGRG 304
Query: 342 YVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEE 401
YV+RR++RRA+R RLLG G +L + ++ ++ EL T +RI +
Sbjct: 305 YVLRRIMRRAIRNMRLLGATGPVVKDLVETVIATMGQQYPELVTD--------RERIEKV 356
Query: 402 LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKE 461
EE RF++TL G +LD A++ T+ +GS L+G AFLL+DT+GFP+++T E
Sbjct: 357 ALAEEARFLKTLNAGTNVLDT----AVTETKAAGSTV-LAGDKAFLLHDTWGFPIDLTLE 411
Query: 462 VAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSA---DLAEKIPDTEFLGYDTL 518
+A E G+SVD GF M+ QR +++A A K D ++A+ T+F+GY
Sbjct: 412 MAAEQGLSVDEDGFRRLMKEQRERAKADALAKKTGHADLGAYREIADSAGATDFIGYTET 471
Query: 519 SAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAV 578
++ V +LV+G ++G +VE++L+RTPFYAE GGQIGD G + G AV
Sbjct: 472 EGESTVVGILVDGLSSPAATEGDEVEIVLDRTPFYAEGGGQIGDTGRIRTDSG-----AV 526
Query: 579 VEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKV 638
+E++D +K + V+VHKG ++ G + VG +A +D + R+ H+ATHL AL+
Sbjct: 527 IEIRDCQKPVPGVYVHKGVVQVGEVTVGARAQASIDDRRRKAIARAHSATHLTHQALRDA 586
Query: 639 IGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAK 698
+G +QAGS R RFDF + + ++E+ IN + ++ VM +D+AK
Sbjct: 587 LGPTAAQAGSENQPGRFRFDFGSPAAVPTAVMTDVEQKINEVLARDLDVRADVMGIDEAK 646
Query: 699 RAGAIAMFGEKYGEQVKI 716
+ GAIA FGEKYGE+V++
Sbjct: 647 KQGAIAEFGEKYGERVRV 664
>gi|365971794|ref|YP_004953355.1| alanyl-tRNA synthetase [Enterobacter cloacae EcWSU1]
gi|365750707|gb|AEW74934.1| Alanyl-tRNA synthetase [Enterobacter cloacae EcWSU1]
Length = 875
Score = 555 bits (1429), Expect = e-155, Method: Compositional matrix adjust.
Identities = 314/689 (45%), Positives = 437/689 (63%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP +R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQYAWELLTGENWFNLPKDR 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NYE DL +IK +++ + D N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYEIDLFSTLIKAVAQVTGAT-----DLNNKSLRVIADHIRSCAFLIADGVIP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRA+R G +LG K L G + + EL K ++
Sbjct: 302 SNENRGYVLRRIIRRAIRHGNMLGAKDTFFYKLVGPLIGVMGAAGDEL--------KRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLKGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQ------AAHNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRARESSGFGADYNAM-IRVDGA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GY+ L V +L V+GK V ++ G D V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYENLELTGKVTALFVDGKAVDSINAGQDAVVILDKTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G +V + + +++G H+G + G L+VG V+A VD R R +++H+ATH
Sbjct: 513 KGNGFSFSVSDTQKYGQAIG----HQGKLTAGSLKVGEGVQANVDEARRARIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G +Q GSLV LRFDF+ + +E+ +E L+N I ++T
Sbjct: 569 LMHAALREVLGTHVAQKGSLVNDKVLRFDFSHFEAMKPSEIRAVEDLVNAQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M L+ AK+ GA+A+FGEKY ++V++ S
Sbjct: 629 HIMDLEAAKKKGAMALFGEKYDDRVRVLS 657
>gi|163749985|ref|ZP_02157229.1| alanyl-tRNA synthetase [Shewanella benthica KT99]
gi|161330259|gb|EDQ01240.1| alanyl-tRNA synthetase [Shewanella benthica KT99]
Length = 874
Score = 555 bits (1429), Expect = e-155, Method: Compositional matrix adjust.
Identities = 301/679 (44%), Positives = 430/679 (63%), Gaps = 46/679 (6%)
Query: 52 SIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQ 110
++R FL+++ GH+V+ S+SLVP DP++L T AGM QFK +FLG+ R RA +SQ
Sbjct: 7 ALRTAFLEYFRKNGHQVVDSSSLVPVNDPSLLFTNAGMNQFKGVFLGEDKRNYTRATSSQ 66
Query: 111 RCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRL 166
RC+R ND++NVG T+RHHTFFEMLGNFSFGDYFK+EAI +AW F T E +P RL
Sbjct: 67 RCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKREAITFAWNFLTQELKIPKERL 126
Query: 167 WISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYYD 219
+++YE D+EA++IW KE+G+ +++ R+G A DNFW G TGPCGPCSEI+YD
Sbjct: 127 CVTIYETDNEAYDIWTKEIGISADNLIRIGDNKGAPYASDNFWQMGDTGPCGPCSEIFYD 186
Query: 220 F--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARIL 277
H G D RFIE +N+VFMQYN++ +G + L + ++DTG+G+ERIA I+
Sbjct: 187 HGEHIWGGRPGTPEEDGDRFIEIWNIVFMQYNRQSNGEMLALPKPSVDTGMGIERIAAIM 246
Query: 278 QKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSN 337
Q V +NYE D+ +IKK +E+ V+ D N +L++I DH+R+ +L++DGV PSN
Sbjct: 247 QGVHSNYEIDIFQALIKKTAEILAVT-----DLENKSLRVISDHIRSCAFLIADGVMPSN 301
Query: 338 IGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQR 397
GRGYV+RR+IRRAVR G LG +F + IE+ + +
Sbjct: 302 EGRGYVLRRIIRRAVRHGNKLGAT--------DSFFYKLVPTLIEVMGEAAKGLVETQAI 353
Query: 398 ILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVE 457
+++ LK EE +F +TLERG +LD L +AL SG+V L G+ AF LYDT+GFPV+
Sbjct: 354 VVKSLKAEEEQFARTLERGLGILDGAL-NAL-----SGNV--LDGETAFKLYDTYGFPVD 405
Query: 458 ITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDT 517
+T +V E ++VD GF++ M QR+++QAA +DS + E +TEF GY
Sbjct: 406 LTADVCRERDITVDEAGFELAMSAQRKRAQAA-GQFGTDYNDSLKIDE---ETEFSGYID 461
Query: 518 LSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTA 577
L + A + ++ GK V +++ G + V+L+ TPFY ESGGQ GD G L TN
Sbjct: 462 LVSNAKITAIYKQGKSVTEINAGEEALVVLDTTPFYGESGGQCGDSGTL----STNGIEF 517
Query: 578 VVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKK 637
+ VKD +K G H G ++ G L +G+ +EA VD LRQR +++H+ THLL AAL++
Sbjct: 518 I--VKDTQK-YGQAVGHLGALKTGSLSLGQSLEASVDKSLRQRTELNHSVTHLLHAALRQ 574
Query: 638 VIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDA 697
++G SQ GSLV +RLRFDF+ + EL+ +E L+N I + L +VM +D A
Sbjct: 575 LLGTHVSQKGSLVDPERLRFDFSHFEGVKPEELQAVEDLVNSQIRHNHELTAQVMTIDAA 634
Query: 698 KRAGAIAMFGEKYGEQVKI 716
K GA+A+FGEKY ++V++
Sbjct: 635 KEQGAMALFGEKYADEVRV 653
>gi|114562241|ref|YP_749754.1| alanyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400]
gi|122300463|sp|Q085Z9.1|SYA_SHEFN RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|114333534|gb|ABI70916.1| alanyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400]
Length = 874
Score = 555 bits (1429), Expect = e-155, Method: Compositional matrix adjust.
Identities = 308/680 (45%), Positives = 421/680 (61%), Gaps = 50/680 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
+R FL ++ GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 LRSAFLKYFEDNGHQVVDSSSLVPTNDPTLLFTNAGMNQFKDVFLGMDKRNYTRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
C+R ND++NVG T+RHHTFFEMLGNFSFGDYFK++AI++AW F T LP RL
Sbjct: 68 CVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKEDAIRFAWTFLTETLKLPKERLC 127
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYYDF 220
+++YE DDEA+++W +++GVP E++ R+G A DNFW G TGPCGPCSEI+YD
Sbjct: 128 VTIYETDDEAYDLWTQKIGVPAENMIRIGDNKGGAFASDNFWQMGDTGPCGPCSEIFYD- 186
Query: 221 HPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARIL 277
H D G D RFIE +N+VFMQYN++ DG + PL + ++DTG+G+ERIA I+
Sbjct: 187 HGDHIWGGRPGTPEEDGDRFIEIWNIVFMQYNRQADGEMLPLPKPSVDTGMGIERIAAIM 246
Query: 278 QKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSN 337
Q V +NYE D+ +I K +E+ V+ D N +L++I DH+R+ +L++DGV PSN
Sbjct: 247 QGVHSNYEIDIFKQLIAKTAEIIGVT-----DLENKSLRVIADHIRSCAFLIADGVMPSN 301
Query: 338 IGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQR 397
GRGYV+RR+IRRAVR G LG L + + + AI L + Q
Sbjct: 302 EGRGYVLRRIIRRAVRHGNKLGANDAFFYKLVPTLISVMGDAAIGLK---------QTQA 352
Query: 398 ILEE-LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPV 456
I+E+ LK EE +F +TLERG +LD L T L G F LYDT+GFPV
Sbjct: 353 IVEKALKAEEEQFARTLERGLVILDGALNSLQGDT--------LDGDTLFKLYDTYGFPV 404
Query: 457 EITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYD 516
++T +V E ++VD GF+ M QR ++QAA N D ++ L +T F GY
Sbjct: 405 DLTADVCRERDINVDEAGFESAMAEQRSRAQAAGN---FGADYNSQLIID-AETAFSGYT 460
Query: 517 TLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQT 576
L+ + V +L V+GK V V G D V+L+ TPFYAESGGQ+GD G L
Sbjct: 461 ELTGQPNVIALYVDGKAVDTVKAGQDAVVVLDNTPFYAESGGQVGDKGLL------TADG 514
Query: 577 AVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALK 636
V V D +K G H+G + +G L +G+++ A VD KLR R +++H+ THLL AAL+
Sbjct: 515 VVFTVADTQK-FGPATGHQGQLAQGQLVIGQQLTAQVDKKLRHRTQLNHSVTHLLHAALR 573
Query: 637 KVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDD 696
+V+G SQ GSLV +RLRFDF + +EL+ +E L+N I + L T MA+D+
Sbjct: 574 QVLGSHVSQKGSLVNPERLRFDFAHFEAVKPSELKAVEDLVNTQIRRNHELCTAEMAIDE 633
Query: 697 AKRAGAIAMFGEKYGEQVKI 716
AK GA+A+FGEKY +QV++
Sbjct: 634 AKEKGAMALFGEKYDDQVRV 653
>gi|169831075|ref|YP_001717057.1| alanyl-tRNA synthetase [Candidatus Desulforudis audaxviator MP104C]
gi|205830046|sp|B1I370.1|SYA_DESAP RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|169637919|gb|ACA59425.1| alanyl-tRNA synthetase [Candidatus Desulforudis audaxviator MP104C]
Length = 880
Score = 555 bits (1429), Expect = e-155, Method: Compositional matrix adjust.
Identities = 293/671 (43%), Positives = 420/671 (62%), Gaps = 29/671 (4%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IRKR+L+F+A+RGH+V+PSASL+P DPT+L T AGM+ FKP F G + R T Q+
Sbjct: 6 IRKRYLEFFAARGHRVIPSASLIPGNDPTLLWTSAGMVPFKPYFTGVATPEFRRVVTCQK 65
Query: 112 CIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWISVY 171
C+RT D+E VGRT+RHHTFFEMLGNFSFGDYFK+ AI WAWEF T + GL LWISVY
Sbjct: 66 CLRTPDIEMVGRTARHHTFFEMLGNFSFGDYFKERAIPWAWEFVTRDLGLAPEHLWISVY 125
Query: 172 EDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSDVDL 231
DD+EAF+ W + +GVP E I R+G D NFW G GPCGPCSE+YYD P GC
Sbjct: 126 LDDNEAFDHW-RGLGVPAERIVRLGRDTNFWEIG-VGPCGPCSEVYYDRGPAYGCESASC 183
Query: 232 G---DDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDL 288
G D R++E +NLVF+QY + + G PL+ IDTG+GLER+A +LQ V N++TDL
Sbjct: 184 GPGCDCDRWLEIWNLVFIQYFRNEAGDYSPLESPGIDTGMGLERVASVLQGVNTNFDTDL 243
Query: 289 IFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLI 348
+I + + V Y + + LK+I DH RAI + ++DGV PSN GRGYV+RRL+
Sbjct: 244 FRGLIDYTAGVLGVRYG-DDPAGDAALKVIADHGRAITFAIADGVLPSNEGRGYVIRRLL 302
Query: 349 RRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELR 408
RRAVR LLG E FL +A IE +++ + + ++ EE R
Sbjct: 303 RRAVRKALLLG--------REKPFLEGVALAVIEQMAGAYPELETARDSVRKVVRFEEER 354
Query: 409 FVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGV 468
F QTL +G +++ +++A+A + R + L G AF LYDT+GFP+E+T+E+ E G+
Sbjct: 355 FRQTLTQGNEIIGRLIAEARAEKRST-----LEGAAAFQLYDTYGFPLELTREICAEQGL 409
Query: 469 SVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSA---DLAEKIPDTEFLGYDTLSAKAIVE 525
+VD GF+ ++ Q+++++++ + + +L ++I T F+GY+ L A A V
Sbjct: 410 AVDEAGFEAALKAQQQKARSSRRETRYVEERETFFRNLRDEIGLTRFVGYEQLEADAGVR 469
Query: 526 SLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVK 585
+L+ +G+ V G V ++++ TP YAESGGQ+GD+G + +G N + + D
Sbjct: 470 ALIRDGQRVPAAGSGEQVSLVVDTTPCYAESGGQVGDHGLI---EGENVRG---RITDTF 523
Query: 586 KSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQ 645
+ + VH+ + GVLE G + +VD R++ +HTATHLL LK V+G +Q
Sbjct: 524 APVEGLHVHEVVVEAGVLEEGARIRILVDGSRRRKICRNHTATHLLHRTLKAVLGTHVNQ 583
Query: 646 AGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAM 705
AGSLVA +RLRFDF +PL + EL E+E IN + +++ + D A+ GA+A+
Sbjct: 584 AGSLVAPERLRFDFTHIQPLSEAELAEVESRINEIVLSNLRVESFQTSFDRARELGAVAL 643
Query: 706 FGEKYGEQVKI 716
FGEKYG+ V++
Sbjct: 644 FGEKYGDLVRV 654
>gi|161525078|ref|YP_001580090.1| alanyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
gi|189350179|ref|YP_001945807.1| alanyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
gi|205830000|sp|A9AC16.1|SYA_BURM1 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|160342507|gb|ABX15593.1| alanyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
gi|189334201|dbj|BAG43271.1| alanyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
Length = 874
Score = 555 bits (1429), Expect = e-155, Method: Compositional matrix adjust.
Identities = 302/679 (44%), Positives = 421/679 (62%), Gaps = 44/679 (6%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR++FL F+ S+GH ++ S+SLVP DPT++ T +GM+QFK +FLG R RA T+QR
Sbjct: 6 IREKFLKFFESKGHTIVRSSSLVPGNDPTLMFTNSGMVQFKDVFLGTDRRPYTRATTAQR 65
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AI++AWE T + LP ++LW
Sbjct: 66 SVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIRFAWELLTTVYMLPKDKLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYYDF 220
++VY++DDEA++IW KEVGVP E I R+G A DNFW G TGPCGPC+EI+YD
Sbjct: 126 VTVYQEDDEAYDIWAKEVGVPTERIIRIGDNKGARYASDNFWTMGDTGPCGPCTEIFYDH 185
Query: 221 HPD--RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQ 278
P+ G D R+IE +NLVFMQ+N+ G++ L + +DTG+GLER+A +LQ
Sbjct: 186 GPEVWGGPPGSPEEDGDRYIEIWNLVFMQFNRDAQGNMTRLPKPCVDTGMGLERLAAVLQ 245
Query: 279 KVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNI 338
V +NYE DL +IK A+ + VS D N +LK+I DH+RA +L+ DGV P N
Sbjct: 246 HVHSNYEIDLFQNLIKAAARVTEVS-----DLNNNSLKVIADHIRACAFLIVDGVIPGNE 300
Query: 339 GRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRI 398
GRGYV+RR++RRA+R G LG K GAF + + ++K EQR+
Sbjct: 301 GRGYVLRRIVRRAIRHGYKLGRK--------GAFFHKLVADLVAEMGAAYPELKEAEQRV 352
Query: 399 LEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEI 458
+ L++EE RF +T+E G +L+ LAD ++ G V L G+ AF L+DT+GFP+++
Sbjct: 353 TDVLRQEEERFFETIEHGMSILESALADLEAK---GGKV--LDGELAFKLHDTYGFPLDL 407
Query: 459 TKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTL 518
T +V E GV+VD FD M QR Q++AA + L T F GY+ +
Sbjct: 408 TADVCRERGVTVDEPAFDDAMARQREQARAAGK-----FKAAQGLEYTGAKTTFHGYEEI 462
Query: 519 S-AKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTA 577
+ A V +L V+G V +V G D V+L+ TPFYAESGGQ+GD G L N T
Sbjct: 463 AFDDAKVVALYVDGSAVTEVKAGQDAVVVLDHTPFYAESGGQVGDQGVL-----ANASTR 517
Query: 578 VVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKK 637
V D K V H GT+ +G L+VG + A +D + R R + +H+ATHL+ AL++
Sbjct: 518 FA-VADTLKVQADVIGHHGTLEQGTLKVGDVLRAEIDAQRRARTQRNHSATHLMHKALRE 576
Query: 638 VIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDA 697
V+G Q GSLV D+ RFDF + PL D E+ +E+++N I +VM D+A
Sbjct: 577 VLGSHVQQKGSLVDADKTRFDFAHNAPLTDDEIRRVEQIVNDEILANAPGIVRVMPYDEA 636
Query: 698 KRAGAIAMFGEKYGEQVKI 716
+ GA+A+FGEKYG++V++
Sbjct: 637 VKGGAMALFGEKYGDEVRV 655
>gi|410696133|gb|AFV75201.1| alanine--tRNA ligase [Thermus oshimai JL-2]
Length = 874
Score = 555 bits (1429), Expect = e-155, Method: Compositional matrix adjust.
Identities = 320/688 (46%), Positives = 431/688 (62%), Gaps = 48/688 (6%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVP----RQVPRAA 107
IR+ +L F+ +GH LPS SLVPE DP++L T AGM KP FLG+ P ++ R
Sbjct: 6 IREAYLSFFEEKGHLRLPSFSLVPENDPSLLFTSAGMAPLKPYFLGERPIFGGKEWRRVT 65
Query: 108 TSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
T Q C+R D+ENVGRT+RH+T+FEMLGNFSFGDYFKKEAI WAWEF T L NRLW
Sbjct: 66 TCQECLRVGDIENVGRTARHNTYFEMLGNFSFGDYFKKEAILWAWEFLTERLRLDPNRLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGA-----TGPCGPCSEIYYDFHP 222
++V++DDDEA+ IW VGVP E I R G ++N+W GA GP GPCSEI+YD P
Sbjct: 126 VTVFQDDDEAYAIWRDLVGVPEERIGRFGEEENYWPGGAITHGPNGPSGPCSEIFYDRGP 185
Query: 223 DRGCSD---VDLGDDTRFIEFYNLVFMQYNKK----DDGSLEPLKQKNIDTGLGLERIAR 275
+ G D + G RF+E +NLVF QY+++ G L+PL QKNIDTG+GL R+A
Sbjct: 186 EFGTPDETGPNTGSGDRFVEVWNLVFTQYDRQGPIPGPGILKPLPQKNIDTGMGLYRMAA 245
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
ILQ V + Y TD FP+I++ L+ Y + ++ ++I DH+RA+V LSDGV
Sbjct: 246 ILQGVEDFYRTDTFFPLIEEVVRLSGRPY---EGKASVPHRVIADHIRAVVAALSDGVTF 302
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN GRGYVVRRL+RRA+R G LLG L FL +A EL +++
Sbjct: 303 SNTGRGYVVRRLLRRALRYGYLLG--------LSEPFLHRLAPLVAELLGDFYPEMREHL 354
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
+ + +++ EE RF++TLE G K L+ +L+ + G V L G++AF LYDT+GFP
Sbjct: 355 EATVRQVRLEEERFLETLEGGLKRLETLLSGL-----KPGEV--LPGKEAFRLYDTYGFP 407
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNA-----VKLSVDDSADLAEKIPDT 510
+++T E+A E G VD +GF M Q+ +S+ AH A K S + +L + T
Sbjct: 408 LDLTVEIAAERGFGVDTEGFQKAMAEQQERSR-AHMAFEREIFKRSAEALEELYAERGAT 466
Query: 511 EFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQ 570
EFLGY TL + V LL + + + G++V+V+L+RTPFYAE GGQIGD+G L T
Sbjct: 467 EFLGYTTLEGEGEVLLLLAGDQALSEAGPGTEVQVVLDRTPFYAEGGGQIGDFGLLEWTG 526
Query: 571 GTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHL 630
G + V+ V K+ +F+H+ + EGVL VG +V A+VDPK R+ + HHTATHL
Sbjct: 527 GRAR------VETVHKTEKGLFLHRAKVEEGVLRVGEKVRAVVDPK-RRDTERHHTATHL 579
Query: 631 LQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTK 690
L AAL+ V+G QAGSLVA DRLRFDF L ELE IE L+N WI + +
Sbjct: 580 LHAALRAVLGPHVRQAGSLVAPDRLRFDFTHPEALTPEELERIELLVNRWIMADFPVTWR 639
Query: 691 VMALDDAKRAGAIAMFGEKYGEQVKISS 718
+ L++A+R GA+A+FGEKYGE V++ +
Sbjct: 640 YLPLEEARREGAMALFGEKYGEVVRVVT 667
>gi|119946985|ref|YP_944665.1| alanyl-tRNA synthetase [Psychromonas ingrahamii 37]
gi|205830184|sp|A1T001.1|SYA_PSYIN RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|119865589|gb|ABM05066.1| alanyl-tRNA synthetase [Psychromonas ingrahamii 37]
Length = 867
Score = 555 bits (1429), Expect = e-155, Method: Compositional matrix adjust.
Identities = 309/679 (45%), Positives = 430/679 (63%), Gaps = 47/679 (6%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S + IR+ F DF+ ++GH+ + + SLVP +DPT+L T AGM QFK +LG R RA
Sbjct: 4 STNEIRQGFRDFFVNKGHQSVSTGSLVPHDDPTLLFTNAGMNQFKDTYLGTEKRAYTRAT 63
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
+SQ C+R ND++NVG T+RHHTFFEMLGNFSFGDYFK+EAI +AWE+ TVE GLP
Sbjct: 64 SSQCCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKREAIGFAWEYLTVELGLPK 123
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPD 223
++LW++V+++D EA +IW +E+GV + + R+GA DNFW+ G TGPCGPCSEI+YD D
Sbjct: 124 DKLWVTVFDEDLEAEKIWIEEIGVDPKCVLRIGAKDNFWSMGDTGPCGPCSEIFYDHGED 183
Query: 224 --RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVP 281
G D RFIE +N+VFMQYN+ DG++E L + ++DTG+GLERI+ I+Q
Sbjct: 184 VWGGPPGTAEEDGDRFIEIWNIVFMQYNRHADGTMENLPKPSVDTGMGLERISAIMQNCH 243
Query: 282 NNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRG 341
+NYE DL +IKK +E+ S D + +L+++ DH+R+ +L+ DGV PSN GRG
Sbjct: 244 SNYEIDLFQGLIKKVAEVTGAS-----DLEDKSLRVVADHIRSCGFLICDGVMPSNEGRG 298
Query: 342 YVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEE 401
YV+RR+IRRAVR G LG K + + + + ELS +QR+ E
Sbjct: 299 YVLRRIIRRAVRHGHKLGAKDIFFFKIYDELINQMGDAYPELS----------KQRLFVE 348
Query: 402 --LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEIT 459
L+REE +F +TL+RG ++LD L D L E +P G F LYDTFGFP ++T
Sbjct: 349 KILRREEEQFAKTLDRGLQILDNEL-DHL----EGQVIP---GDVVFKLYDTFGFPADLT 400
Query: 460 KEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPD--TEFLGYDT 517
++A E G+++D GFD M QR+++Q A+N +D + L I D TEF+GY+T
Sbjct: 401 ADIARERGLTIDEAGFDKAMAEQRKRAQQANN---FGIDYNKTL---IIDQKTEFIGYET 454
Query: 518 LSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTA 577
L A V L+V G V + +G +V+L+ TPFYAE+GGQ GD G L + G
Sbjct: 455 LQGAATVTHLVVEGAFVNALKEGDSGQVILSATPFYAEAGGQSGDAGKLILNNG------ 508
Query: 578 VVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKK 637
V V D KKS G FVH G + G ++V +V A VD RQ +HH+ATHLL AAL+K
Sbjct: 509 VFVVTDTKKS-GDAFVHSGYVGMGSVKVNDKVHAEVDTARRQSIALHHSATHLLHAALRK 567
Query: 638 VIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDA 697
+G+ +Q GSLV D+LRFDF+ L L E+ L+N I + + TK+M +++A
Sbjct: 568 TLGEHVTQKGSLVDADKLRFDFSHFEALSADSLSEVTFLVNEAIRNNYEVVTKLMDIEEA 627
Query: 698 KRAGAIAMFGEKYGEQVKI 716
K + A+A+FGEKY E V++
Sbjct: 628 KSSNAMALFGEKYDEMVRV 646
>gi|422022023|ref|ZP_16368532.1| alanyl-tRNA ligase [Providencia sneebia DSM 19967]
gi|414097773|gb|EKT59426.1| alanyl-tRNA ligase [Providencia sneebia DSM 19967]
Length = 875
Score = 555 bits (1429), Expect = e-155, Method: Compositional matrix adjust.
Identities = 303/684 (44%), Positives = 428/684 (62%), Gaps = 52/684 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ ++GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 8 IRQAFLDFFHTKGHQVVNSSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRAYSRATTAQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AI +AWE T + F LP +
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAINFAWELLTGKEWFNLPKEK 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIWNKE+G+PVE I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYETDDEAYEIWNKEIGIPVERIIRIGDNKGAPFASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG +EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQSDGRMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ D+ +I A+ + + D +N +L++I DH+R+ +L+SDGV P
Sbjct: 247 VLQHVNSNYDIDIFRDLIAAAAAVTGAT-----DLSNKSLRVIADHIRSCAFLVSDGVIP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN GRGYV+RR+IRRAVR G +LG K L + + A EL R+
Sbjct: 302 SNEGRGYVLRRIIRRAVRHGYMLGAKDTFFYKLVAPLIKVMGPAADELQ---------RQ 352
Query: 396 QRILEE-LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGF 454
Q +E+ L+ EE +F +TLERG +LLD+ LA T L G+ AF LYDT+GF
Sbjct: 353 QATVEKVLQTEEEQFARTLERGLQLLDEELASLKGDT--------LEGETAFRLYDTYGF 404
Query: 455 PVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLG 514
P+++T +V E + VD +GF+ ME+QRR+++ + D L + +EF G
Sbjct: 405 PIDLTADVCRERNIKVDEEGFERAMEDQRRRARESSGFGA----DYNSLIKVEKRSEFSG 460
Query: 515 YDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQ 574
Y A + ++ +G+P+ + G + V+L++T FYAESGGQ+GD G L G
Sbjct: 461 YTDNEQLATITAIYKDGQPIDSLKTGEEGLVILDKTAFYAESGGQVGDIGTLQNESGN-- 518
Query: 575 QTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAA 634
V D +K G H G + G+L V ++A ++ + R +++H+ATHLL AA
Sbjct: 519 ----FVVTDTQK-YGQAIGHIGKVESGILVVNHRIDAKINAERRDAIRLNHSATHLLHAA 573
Query: 635 LKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMAL 694
L++V+G SQ GSLV LRFDF+ + + +L E+E ++N I + ++T++M L
Sbjct: 574 LRQVLGTHVSQKGSLVNDKYLRFDFSHFQAMTPAQLREVEDIVNAQIRNNTPIETELMDL 633
Query: 695 DDAKRAGAIAMFGEKYGEQVKISS 718
+DAK GA+A+FGEKY E V++ S
Sbjct: 634 EDAKAKGAMALFGEKYEEHVRVLS 657
>gi|397667526|ref|YP_006509063.1| alanyl-tRNA synthetase [Legionella pneumophila subsp. pneumophila]
gi|395130937|emb|CCD09186.1| alanyl-tRNA synthetase [Legionella pneumophila subsp. pneumophila]
Length = 860
Score = 555 bits (1429), Expect = e-155, Method: Compositional matrix adjust.
Identities = 306/676 (45%), Positives = 433/676 (64%), Gaps = 45/676 (6%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FL+++ RGH+++ S+SLVP DPT+L T AGM+QFK +FLG R RAAT+QR
Sbjct: 6 IRQAFLNYFVQRGHQIVASSSLVPSNDPTLLFTNAGMVQFKDLFLGLETRSYQRAATAQR 65
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK+EAIQ+AWEF T +PA RLW
Sbjct: 66 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKREAIQYAWEFLTEVLHIPAERLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPD---- 223
++VY++D EA +IW +E+ V E R G DNFW+ G TGPCGPC+EI+YD P+
Sbjct: 126 VTVYKEDLEAEDIWLREMKVSPERFSRCGEKDNFWSMGDTGPCGPCTEIFYDHGPEVAGG 185
Query: 224 -RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPN 282
G D D GD R+IE +NLVFMQ+N+ +G L PL + ++DTG+GLER+A ++Q V +
Sbjct: 186 PPGSPDED-GD--RYIEIWNLVFMQFNRDREGHLHPLPKPSVDTGMGLERLAAVIQGVHS 242
Query: 283 NYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGY 342
NYE D +IK ++L Q D + +LK+I DH+R+ +L+ DGV PSN GRGY
Sbjct: 243 NYEIDSFQYLIKAIAQL-----GQDIDLNHTSLKVIADHIRSCSFLIVDGVLPSNEGRGY 297
Query: 343 VVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEEL 402
V+RR+IRRAVR G LG+ L + + + EL I+S KA +RIL++
Sbjct: 298 VLRRIIRRAVRHGNKLGLPSPFFSKLVQPLIDVMGDAYPEL---INS--KAHIERILQQ- 351
Query: 403 KREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEV 462
EE +F +TLE+G +LL + + + LSG+ AF LYDT+GFP+++T ++
Sbjct: 352 --EENQFTRTLEQGLRLLQDHIKNLQGQ--------ELSGEVAFKLYDTYGFPIDLTADI 401
Query: 463 AEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTLSAKA 522
E G+ +DM+ F+ M+ QR QSQAA + + D A +++ +EF GY+ S +A
Sbjct: 402 IREQGLHIDMEAFNQLMQQQREQSQAAS---QFTTDYHA-VSQLDHQSEFHGYEKESMEA 457
Query: 523 IVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVK 582
+ LL G V ++KG+ V+L+ TPFYAESGGQ+GD G L + T Q V
Sbjct: 458 KIIGLLQEGNEVKSINKGAKGAVILDHTPFYAESGGQVGDKGLLIGKEFTFQ------VD 511
Query: 583 DVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQE 642
D +K +G VH G + +G L + + A VD R +++HTATHLL AALKK++GQ
Sbjct: 512 DTQK-VGQAVVHYGKVIKGELTLDLLIHAQVDNIRRDAIRLNHTATHLLHAALKKIVGQH 570
Query: 643 TSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGA 702
Q GSLV +R RFDF+ L ++++IE ++N I N + T+VM ++ AK++GA
Sbjct: 571 VQQRGSLVDAERARFDFSHFEALTPQQIQQIEEVVNAQIRANNEVITQVMDIESAKQSGA 630
Query: 703 IAMFGEKYGEQVKISS 718
+A+FGEKY + V++ S
Sbjct: 631 VALFGEKYSDAVRVLS 646
>gi|406036183|ref|ZP_11043547.1| alanyl-tRNA ligase [Acinetobacter parvus DSM 16617 = CIP 108168]
Length = 891
Score = 555 bits (1429), Expect = e-155, Method: Compositional matrix adjust.
Identities = 304/692 (43%), Positives = 440/692 (63%), Gaps = 54/692 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FL ++ S+GH + S+SLVP DPT+L T AGM QFK FLG R RA +SQ+
Sbjct: 6 IREAFLRYFESQGHTRVASSSLVPANDPTLLFTNAGMNQFKDCFLGLEKRDYVRAVSSQK 65
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND++NVG T+RHHTFFEMLGNFSFGDYFK+ A+++AWEF T E GLP +R
Sbjct: 66 CVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKENALKFAWEFLTSEQWLGLPKDR 125
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
L+++VY DDEAF+IWNKE+G+ E I R+G A DNFW G TGPCGPCSEI+Y
Sbjct: 126 LYVTVYHTDDEAFDIWNKEIGIDAERIIRIGDNKGGKYASDNFWAMGDTGPCGPCSEIFY 185
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D RFIE +N VFMQ+N+ DG + PL ++DTG+GLERI+
Sbjct: 186 D-HGDHIWGGLPGTPEEDGDRFIEIWNNVFMQFNRTADGVMHPLPAPSVDTGMGLERISA 244
Query: 276 ILQKVPNNYETDLIFPIIKKASELANV------SYAQSNDRT---NLNLKIIGDHLRAIV 326
+LQ V +NYE DL ++K A+++ + + A++ ++ +LK+I DH R+
Sbjct: 245 VLQHVNSNYEIDLFQHLLKAAADIIGLDTTAIEAEAKAQNKPVEYPASLKVIADHARSCS 304
Query: 327 YLLSDGVFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTH 386
+L++DGV PSN GRGYV+RR+IRRAVR G LG G +F + + IE+
Sbjct: 305 FLIADGVNPSNEGRGYVLRRIIRRAVRHGNKLGATG--------SFFYKMLQPLIEVMGD 356
Query: 387 IDSDVKAREQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAF 446
++ A++ RI +L +EE +F +TLE+G KLL+ LA + G+V + G+ F
Sbjct: 357 AYPELAAQQARIEAQLLKEEEQFAKTLEQGLKLLEGELA------QLKGNV--IPGETVF 408
Query: 447 LLYDTFGFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEK 506
LYDT+GFP ++T ++A E +++D GF++EM QR Q A +A K +VD ++ + +
Sbjct: 409 KLYDTYGFPTDLTADIARERDLTIDEAGFEVEMAAQR---QRARDAGKFAVDYNS-IVKV 464
Query: 507 IPDTEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFL 566
+T+F GYD + + ++ +G V ++++G + ++LN+TPFYAESGGQIGD G
Sbjct: 465 EGETQFDGYDATQGQGQIVAIYKDGVQVDEINEGDEALIVLNQTPFYAESGGQIGDTGIF 524
Query: 567 YVTQGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHT 626
T + EV+D KKS G FVH+G + G L+ + VEA V +R +H+
Sbjct: 525 ------KNDTGIFEVQDTKKS-GGAFVHQGIVTMGSLKATQNVEATVKADIRAATARNHS 577
Query: 627 ATHLLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANL 686
ATHLL AAL++++G+ Q GSLVA D LRFDF +P+ +L++IERL+N +
Sbjct: 578 ATHLLHAALRQILGEHVQQKGSLVASDILRFDFANDQPVSFEQLQQIERLVNAEVIANTA 637
Query: 687 LQTKVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+ T+++ ++ AK GA+ +FGEKYGE+V++ S
Sbjct: 638 VSTELLDIESAKAKGAMMLFGEKYGEEVRVLS 669
>gi|167037465|ref|YP_001665043.1| alanyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|167040127|ref|YP_001663112.1| alanyl-tRNA synthetase [Thermoanaerobacter sp. X514]
gi|300914211|ref|ZP_07131527.1| alanyl-tRNA synthetase [Thermoanaerobacter sp. X561]
gi|307724554|ref|YP_003904305.1| alanyl-tRNA synthetase [Thermoanaerobacter sp. X513]
gi|320115879|ref|YP_004186038.1| alanyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
Ako-1]
gi|205830277|sp|B0K994.1|SYA_THEP3 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|205830278|sp|B0K0Q1.1|SYA_THEPX RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|166854367|gb|ABY92776.1| alanyl-tRNA synthetase [Thermoanaerobacter sp. X514]
gi|166856299|gb|ABY94707.1| alanyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|300889146|gb|EFK84292.1| alanyl-tRNA synthetase [Thermoanaerobacter sp. X561]
gi|307581615|gb|ADN55014.1| alanyl-tRNA synthetase [Thermoanaerobacter sp. X513]
gi|319928970|gb|ADV79655.1| alanyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
Ako-1]
Length = 877
Score = 555 bits (1429), Expect = e-155, Method: Compositional matrix adjust.
Identities = 308/675 (45%), Positives = 434/675 (64%), Gaps = 36/675 (5%)
Query: 51 DSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATS 109
+ IR++FL F+ S+GH LPS SL+P+ D ++LL +GM KP F GK R T
Sbjct: 7 NEIREKFLSFFESKGHLRLPSFSLIPKNDKSLLLINSGMAPLKPYFTGKETPPSKRVTTC 66
Query: 110 QRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWIS 169
QRCIRT D+E VG+T+RH TFFEMLGNFSFGDYFKKEAI WAWEF T GLP NRLW+S
Sbjct: 67 QRCIRTPDIERVGKTARHGTFFEMLGNFSFGDYFKKEAIPWAWEFVTEVLGLPVNRLWVS 126
Query: 170 VYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSDV 229
+YE+DDEAFEIWNK VG+P E I RMG +DNFW G TGPCGP SEIY+D ++GC
Sbjct: 127 IYEEDDEAFEIWNKIVGLPPERIVRMGKEDNFWEIG-TGPCGPSSEIYFDRGEEKGCGKP 185
Query: 230 DLG---DDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYET 286
G D RFIEF+NLVF Q+NK + G+ L NIDTG+GLERIA I+Q V + ++
Sbjct: 186 TCGVGCDCDRFIEFWNLVFTQFNKDEQGNYHRLPNPNIDTGMGLERIATIMQGVDSIFDV 245
Query: 287 DLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRR 346
D+I I S++A V Y + ++ +++L++I DH+R I +++SDG+ PSN GRGYV+RR
Sbjct: 246 DVIRGITNFVSQIAEVEYGKDAEK-DVSLRVITDHIRGITFMISDGILPSNEGRGYVLRR 304
Query: 347 LIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREE 406
L+RRA R G+LLGI FL + + +E ++ R+ I +K EE
Sbjct: 305 LLRRAARHGKLLGIN--------DTFLYRVVDSVVENYGEAYPEIIDRKDYIKRIVKLEE 356
Query: 407 LRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEH 466
RF +T+++G + L D ++ + G L G AF LYDT+GFP+++TKE+ +E
Sbjct: 357 ERFKETIDQGLTI----LQDYINELKVQGKTV-LEGSKAFKLYDTYGFPLDLTKEILQEA 411
Query: 467 GVSVDMKGFDIEMENQR---RQSQAAHNAVKLSVDDSADLAEKIPD--TEFLGYDTLSAK 521
G++VD +G+ E+E QR R S+ N++ D+ + D T+F+GYDT +
Sbjct: 412 GITVDEEGYTKELEKQRIRARSSRKEDNSLW-----EQDIYSTLGDIKTKFVGYDTYESN 466
Query: 522 AIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEV 581
+ V +++ + + V + G DV ++L+ TPFYAESGGQIGD G L + +++V
Sbjct: 467 SKVLAIVKDEELVEEAEAGDDVSIILDVTPFYAESGGQIGDNGIL------ENENVLIKV 520
Query: 582 KDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQ 641
KD KK +G F+H GTI G++ V EV+A +D R+ A +HTATHLL ALK+++G
Sbjct: 521 KDCKK-VGDRFIHIGTIERGLISVRDEVKAQIDVVSRRNAARNHTATHLLHKALKEILGD 579
Query: 642 ETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAG 701
QAGSLVA DRLRFDF+ ++ + EL++IE +N I + + + D+A + G
Sbjct: 580 HVHQAGSLVADDRLRFDFSHYQAVTKEELKQIENRVNEKIYQSLNVHIEEKTYDEAVKEG 639
Query: 702 AIAMFGEKYGEQVKI 716
A+A+F EKYG++V++
Sbjct: 640 AVALFTEKYGDKVRV 654
>gi|294649969|ref|ZP_06727359.1| alanine--tRNA ligase [Acinetobacter haemolyticus ATCC 19194]
gi|292824138|gb|EFF82951.1| alanine--tRNA ligase [Acinetobacter haemolyticus ATCC 19194]
Length = 884
Score = 555 bits (1429), Expect = e-155, Method: Compositional matrix adjust.
Identities = 306/693 (44%), Positives = 436/693 (62%), Gaps = 51/693 (7%)
Query: 43 SQDFPSSGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPR 101
S F +S + IR+ FL ++ S+GH + S+SLVP DPT+L T AGM QFK FLG R
Sbjct: 4 STRFMTSAE-IREAFLRYFESQGHTRVASSSLVPANDPTLLFTNAGMNQFKDCFLGLEKR 62
Query: 102 QVPRAATSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTV 157
RA +SQ+C+R ND++NVG T+RHHTFFEMLGNFSFGDYFK+ A+++AWEF T
Sbjct: 63 DYVRAVSSQKCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKQNALKFAWEFLTS 122
Query: 158 E--FGLPANRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATG 208
E GLP +RL+++VY DDEAF+IWNKE+GV E I R+G A DNFW G TG
Sbjct: 123 EQWLGLPKDRLYVTVYHTDDEAFDIWNKEIGVDAERIIRIGDNKGGQYASDNFWAMGDTG 182
Query: 209 PCGPCSEIYYDFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNID 265
PCGPCSEI+YD H D G D RFIE +N VFMQ+N+ DG + PL ++D
Sbjct: 183 PCGPCSEIFYD-HGDHIWGGLPGTPEEDGDRFIEIWNNVFMQFNRTADGVMHPLPAPSVD 241
Query: 266 TGLGLERIARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAI 325
TG+GLERI+ +LQ V +NYE DL ++K A+ + + D +L+++ DH R+
Sbjct: 242 TGMGLERISAVLQHVNSNYEIDLFQHLLKAAANIIGIE-----DEGQPSLRVVADHARSC 296
Query: 326 VYLLSDGVFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELST 385
+L++DGV PSN GRGYV+RR+IRRAVR G LG G F + + IE+
Sbjct: 297 CFLIADGVNPSNEGRGYVLRRIIRRAVRHGNKLGATG--------TFFYKMLQPLIEVMG 348
Query: 386 HIDSDVKAREQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDA 445
++ AR+ I L REE +F +TLE+G KLL+ LA + G+V ++G+
Sbjct: 349 EAYPELAARKDVIEATLIREEEQFAKTLEQGLKLLEGELA------QLKGNV--IAGETV 400
Query: 446 FLLYDTFGFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAE 505
F LYDT+GFP ++T ++A E +++D GF++EM QR Q A +A K +VD ++ + +
Sbjct: 401 FKLYDTYGFPTDLTADIARERDLTIDEAGFEVEMAAQR---QRARDAGKFAVDYNS-IVK 456
Query: 506 KIPDTEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGF 565
+T+F GYD + + ++ +G V ++++G + ++LN+TPFYAESGGQIGD G
Sbjct: 457 VEGETQFDGYDATHGQGQIVAIYKDGIQVDEINEGDEALIVLNQTPFYAESGGQIGDTGI 516
Query: 566 LYVTQGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHH 625
T + EV+D KKS G FVH+G + G L+ + VEA V +R +H
Sbjct: 517 F------KNDTGIFEVQDTKKS-GGAFVHQGIVTVGSLKATQSVEATVKADIRAATARNH 569
Query: 626 TATHLLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDAN 685
+ATHLL AAL++++G Q GSLVA D LRFDF +P+ +L++IERL+N +
Sbjct: 570 SATHLLHAALRQILGDHVQQKGSLVASDILRFDFANDQPVTFDQLQQIERLVNAEVLANT 629
Query: 686 LLQTKVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+ T+++ ++ AK GA+ +FGEKYG++V++ S
Sbjct: 630 PVTTELLDIETAKAKGAMMLFGEKYGDEVRVLS 662
>gi|395010521|ref|ZP_10393893.1| alanine--tRNA ligase [Acidovorax sp. CF316]
gi|394311408|gb|EJE48759.1| alanine--tRNA ligase [Acidovorax sp. CF316]
Length = 877
Score = 554 bits (1428), Expect = e-155, Method: Compositional matrix adjust.
Identities = 307/683 (44%), Positives = 419/683 (61%), Gaps = 57/683 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IRK FLDF+AS+GH ++ S+SLVP DPT++ T +GM+QFK +FLG R RA + Q
Sbjct: 14 IRKSFLDFFASKGHTIVASSSLVPGNDPTLMFTNSGMVQFKDVFLGTDKRPYNRAVSVQA 73
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
C+R ND+ENVG T+RHHTFFEMLGN+SFGDYFK+E++ WAWE T + LP RL
Sbjct: 74 CLRAGGKHNDLENVGYTARHHTFFEMLGNWSFGDYFKRESLHWAWELLTTVYKLPPERLL 133
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGAD-------DNFWNSGATGPCGPCSEIYYDF 220
+VY++DDEA++IW KE+G+P E + R+G + DNFW TGPCGPCSEI+YD
Sbjct: 134 ATVYQEDDEAYDIWTKEIGLPPERVIRIGDNKGGRYKSDNFWMMADTGPCGPCSEIFYD- 192
Query: 221 HPDR------GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIA 274
H D G D D GD RFIE +N VFMQ++ +DGS+ PL +DTG+GLER+A
Sbjct: 193 HGDHIPGGPPGSPDED-GD--RFIEIWNNVFMQFDMAEDGSVTPLPAPCVDTGMGLERLA 249
Query: 275 RILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVF 334
ILQ V +NYE DL +IK A V+ D N +L++I DH+RA +L+SDGV
Sbjct: 250 AILQHVHSNYEIDLFDALIKAAGRETGVA-----DLNNKSLRVIADHIRATAFLVSDGVI 304
Query: 335 PSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAR 394
PSN GRGYV RR++RRA+R G LG K F + + + + ++ +
Sbjct: 305 PSNEGRGYVQRRIVRRAIRHGYKLGKK--------TPFFHKLVAELVRVMGDAYPKLREQ 356
Query: 395 EQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGF 454
EQRI E LK EE RF +TL G ++LD LA G L G AF L+DT+GF
Sbjct: 357 EQRITEVLKAEEERFFETLANGMEILDTALA---------GDAKVLPGDVAFKLHDTYGF 407
Query: 455 PVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLG 514
P+++T +V E V VD GF + ME Q+ Q++AA K +D + D + F G
Sbjct: 408 PLDLTNDVCRERDVEVDEAGFKVAMEKQKAQARAAG---KFKMDKALDYTGDV--NRFTG 462
Query: 515 YDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQ 574
Y+ L+ A + ++ V+G + G + V+L+ TPFYAESGGQ+GD G +T G
Sbjct: 463 YEQLAETAKITAIYVDGTSSAALKAGQNGVVVLDTTPFYAESGGQVGDEG--TITSG--- 517
Query: 575 QTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAA 634
+A V D K V+ H GT+ EG L VG V+A V+ LR +H+ATHL+ A
Sbjct: 518 -SARFAVGDTLKIKADVYGHHGTLEEGTLNVGDTVQAEVNTALRAATVRNHSATHLMHKA 576
Query: 635 LKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANL-LQTKVMA 693
L++V+G Q GSLV +R RFDF + P+ D ++ EIERL+N + ANL Q +VM
Sbjct: 577 LREVLGSHVQQKGSLVNAERTRFDFAHNAPVTDAQVREIERLVNEEV-LANLPTQARVMD 635
Query: 694 LDDAKRAGAIAMFGEKYGEQVKI 716
++ A++ GA+ +FGEKYGE V++
Sbjct: 636 IESAQKTGAMMLFGEKYGETVRV 658
>gi|291450311|ref|ZP_06589701.1| alanyl-tRNA synthetase [Streptomyces albus J1074]
gi|421739499|ref|ZP_16177807.1| alanyl-tRNA synthetase [Streptomyces sp. SM8]
gi|291353260|gb|EFE80162.1| alanyl-tRNA synthetase [Streptomyces albus J1074]
gi|406692135|gb|EKC95848.1| alanyl-tRNA synthetase [Streptomyces sp. SM8]
Length = 890
Score = 554 bits (1428), Expect = e-155, Method: Compositional matrix adjust.
Identities = 307/678 (45%), Positives = 421/678 (62%), Gaps = 33/678 (4%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQRC 112
IR+R+L F+ RGH V+PSASL+ +DPT+LL AGM+ FKP FLG+ PRA + Q+C
Sbjct: 6 IRRRWLRFFEERGHAVVPSASLIADDPTLLLVPAGMVPFKPYFLGEATPPAPRATSVQKC 65
Query: 113 IRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE-----FGLPANRLW 167
+RT D+E VG+T+RH TFF+M GNFSFGDYFK+ AI +AWE T +GL RLW
Sbjct: 66 VRTPDIEEVGKTTRHGTFFQMCGNFSFGDYFKEGAITYAWELLTTSQEQGGYGLDPERLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCS 227
I+VY DDDEA IW +++GVP E I+R+G DNFW+ G GPCGPCSEI YD P+ G
Sbjct: 126 ITVYLDDDEAETIWREKIGVPAERIQRLGKKDNFWSMGVPGPCGPCSEINYDRGPEFGVE 185
Query: 228 DVDLGDDTRFIEFYNLVFMQY------NKKDDGSLEPLKQKNIDTGLGLERIARILQKVP 281
+D R++E +NLVFMQY +K++ L L KNIDTGLGLER+A ILQ V
Sbjct: 186 GGPAVNDERYVEIWNLVFMQYERGAGEDKENFPILGDLPSKNIDTGLGLERLAMILQDVR 245
Query: 282 NNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRG 341
N YE D +I KA+EL V Y ++ ++++L+++ DH+R V L+ DGV P N GRG
Sbjct: 246 NLYEIDTSRIVIDKATELTGVQYG-ADQASDVSLRVVTDHMRTSVMLIGDGVTPGNEGRG 304
Query: 342 YVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEE 401
YV+RR++RRAVR RLLG G L + S+ ++ EL T +RIL
Sbjct: 305 YVLRRIMRRAVRNMRLLGATGPVVAELVDTVIESMGQQYPELITE--------RKRILTV 356
Query: 402 LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKE 461
EE F++ L+ G +LD A++ T+ +GS LSG AFLL+DT+GFP+++T E
Sbjct: 357 ALAEEAAFLKALKGGTNILDT----AVTETKAAGSTV-LSGDKAFLLHDTWGFPIDLTLE 411
Query: 462 VAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLS-VDDSA--DLAEKIPDTEFLGYDTL 518
+A E G+SVD GF M+ QR +++A A K D SA ++A+ T+F GY
Sbjct: 412 MAAEQGLSVDEPGFRRLMKEQRERAKADARAKKTGHADLSAYREVADAAGATDFTGYLAT 471
Query: 519 SAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAV 578
++ V LLV+G ++G +VE++L+RTPFYAE GGQI D G + G AV
Sbjct: 472 EGESTVVGLLVDGVSSPAATEGDEVEIVLDRTPFYAEGGGQIADTGRIRFDNG-----AV 526
Query: 579 VEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKV 638
VEV+DV+K + V VHKG ++ G + VG A +D R+ H+ATHL AL+
Sbjct: 527 VEVRDVQKPVPGVHVHKGVVQVGEVTVGSPAYAAIDVGRRRAIARAHSATHLTHQALRDA 586
Query: 639 IGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAK 698
+G +QAGS R RFDF + L ++E+ IN + +Q +VM++DDAK
Sbjct: 587 LGPTAAQAGSENQPGRFRFDFGSPAAVPGAVLTDVEQKINEVLARDLDVQAEVMSIDDAK 646
Query: 699 RAGAIAMFGEKYGEQVKI 716
+ GAIA FGEKYGE+V++
Sbjct: 647 KQGAIAEFGEKYGERVRV 664
>gi|290476264|ref|YP_003469168.1| alanyl-tRNA synthetase [Xenorhabdus bovienii SS-2004]
gi|289175601|emb|CBJ82404.1| alanyl-tRNA synthetase [Xenorhabdus bovienii SS-2004]
Length = 887
Score = 554 bits (1428), Expect = e-155, Method: Compositional matrix adjust.
Identities = 301/686 (43%), Positives = 431/686 (62%), Gaps = 56/686 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ ++GH+++PS+SLVP DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 20 IRQAFLDFFHTKGHQIVPSSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRPYSRATTAQR 79
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI++AWE T + F LP +
Sbjct: 80 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAIKYAWELLTGKEWFNLPKEK 139
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA++IW+KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 140 LWVTVYETDDEAYDIWHKEVGIPAERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 199
Query: 219 DF--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARI 276
D H G D R+IE +N+VFMQ+N+ DG++EPL + ++DTG+GLER+ +
Sbjct: 200 DHGEHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRHVDGTMEPLPKPSVDTGMGLERLTAV 259
Query: 277 LQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPS 336
LQ V +NY+ DL +I +E+ + D TN +L++I DH+R+ +L+ DGV PS
Sbjct: 260 LQHVNSNYDIDLFCDLIASVAEVTGAT-----DLTNKSLRVIADHIRSCAFLVCDGVVPS 314
Query: 337 NIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQ 396
N RGYV+RR+IRRAVR G +LG K F + I++ ++K R+Q
Sbjct: 315 NENRGYVLRRIIRRAVRHGNMLGAKE--------TFFYKLVAPLIKIMGSAGDELK-RQQ 365
Query: 397 RILEE-LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++E+ LK EE +F +TLERG +LLD+ L E S L G+ AF LYDT+GFP
Sbjct: 366 SLVEQVLKTEEEQFARTLERGLQLLDEEL--------EKLSGDTLDGETAFRLYDTYGFP 417
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIP---DTEF 512
V++T +V E + VD GFD+ MENQRR+++ + D E+I ++F
Sbjct: 418 VDLTADVCRERNIKVDEVGFDVAMENQRRRARESSGF-------GTDYNEQIKVDGRSDF 470
Query: 513 LGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGT 572
GY+ S +A V ++ +G+ + ++ G + V+L++T FYAESGGQ+GD G L G
Sbjct: 471 SGYEHNSQQATVMAIFRHGEAIDQIHAGEEAIVILDKTAFYAESGGQVGDTGNLSNGNG- 529
Query: 573 NQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQ 632
+ EV D +K G H G + G L V + A ++ R +++H+ATHLL
Sbjct: 530 -----IFEVTDTQK-YGQAIGHIGKLINGTLNVNNTINAEINRVRRDSIRLNHSATHLLH 583
Query: 633 AALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVM 692
AAL++++G+ SQ GSLV LRFDF+ + ++ ++E L+N I + T++M
Sbjct: 584 AALRQILGEHVSQKGSLVNDKYLRFDFSHFEAMKLEQIRQVENLVNEEIRKNLSIVTELM 643
Query: 693 ALDDAKRAGAIAMFGEKYGEQVKISS 718
L++AK GA+A+FGEKY EQV++ S
Sbjct: 644 ELEEAKTKGAMALFGEKYDEQVRVLS 669
>gi|167628656|ref|YP_001679155.1| alanyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
gi|205830065|sp|B0TFY7.1|SYA_HELMI RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|167591396|gb|ABZ83144.1| alanyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
Length = 883
Score = 554 bits (1428), Expect = e-155, Method: Compositional matrix adjust.
Identities = 299/679 (44%), Positives = 433/679 (63%), Gaps = 32/679 (4%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
+G+ +R+ FL+++ +GH ++ S+SLVP DPT+L + AGM QFK +FLG R RA
Sbjct: 4 TGNRVRQLFLEYFEQKGHTIVASSSLVPHNDPTLLFSNAGMNQFKDVFLGFEKRPYLRAT 63
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
TSQ+C+R ND++ VGRT+RHHTFFEMLGNFSFGDYFKK+AI++AWEF T GLP
Sbjct: 64 TSQKCVRAGGKHNDLDTVGRTARHHTFFEMLGNFSFGDYFKKDAIRYAWEFLTDVCGLPK 123
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPD 223
++L+ +VY DDDEAF +W +G+P I R+G DNFW G TGPCGPCSEI D
Sbjct: 124 DKLYATVYLDDDEAFALWRDMIGLPEARILRLGEKDNFWAMGDTGPCGPCSEILIDRGEH 183
Query: 224 RGCSDVDLG----DDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQK 279
C + D R++E +NLVFMQYN+ ++G++ PL + +IDTG+GLER+ +LQK
Sbjct: 184 LRCKAEECAIGKCDCDRWLEIWNLVFMQYNRDENGTMTPLPRPSIDTGMGLERVTSVLQK 243
Query: 280 VPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIG 339
V +NY+TDL+ P+I +L Y +DR ++I DH+R+ +L++DGV PSN G
Sbjct: 244 VGSNYDTDLLRPLIAFVEQLCGQVY-HRDDR-GFPFRVIADHIRSCTFLITDGVLPSNEG 301
Query: 340 RGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRIL 399
RGYV+RR++RRAVR G++LGI + F+ I +EL D++ ++ +
Sbjct: 302 RGYVLRRILRRAVRFGKVLGI--------DKPFMYEIVPVVVELMGEAYPDIREKQDFVC 353
Query: 400 EELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEIT 459
+ +K EE RF +TL G ++ M+A +E G+V L G+ AF LYDT+GFP+++
Sbjct: 354 KVIKIEEERFHETLHDGMRIAADMVAKV---KQEGGNV--LPGKQAFTLYDTYGFPLDLA 408
Query: 460 KEVAEEHGVSVDMKGFDIEMENQRRQSQAAH--NAVKLSVDDSADLAEKIPDTEFLGYDT 517
+++AEE+G++VD GF ME QR +++AA A ++ A+L +++ T F GY
Sbjct: 409 EDIAEENGLTVDKDGFQQAMEAQRERARAARQDTAYGAGMELWAELLQQLGPTVFTGYGR 468
Query: 518 LSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTA 577
S +++V++++ V + G+ V+V+L TPFYAESGGQIGD G L A
Sbjct: 469 TSGESVVKAIVAGATRVTEAGAGTAVQVVLAETPFYAESGGQIGDSGLLRAGD------A 522
Query: 578 VVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKK 637
VV V+D KK G + VH G + EGV + G +V A V+ R HH+ATHL+ ALK+
Sbjct: 523 VVRVEDTKKMAGGLHVHFGVVAEGVFKEGDQVVAEVESARRLAIARHHSATHLMHKALKE 582
Query: 638 VIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDA 697
V+G+ +QAGSLV DRLRFDF+ PL E IE +N + A ++ ++D+A
Sbjct: 583 VLGEHVNQAGSLVTPDRLRFDFSHFSPLTRDEWNRIEAAVNRAVFQALPVEVFETSIDEA 642
Query: 698 KRAGAIAMFGEKYGEQVKI 716
K GA A+FGEKYG++V++
Sbjct: 643 KAMGATALFGEKYGDRVRV 661
>gi|320335628|ref|YP_004172339.1| alanyl-tRNA synthetase [Deinococcus maricopensis DSM 21211]
gi|319756917|gb|ADV68674.1| alanyl-tRNA synthetase [Deinococcus maricopensis DSM 21211]
Length = 894
Score = 554 bits (1428), Expect = e-155, Method: Compositional matrix adjust.
Identities = 298/695 (42%), Positives = 434/695 (62%), Gaps = 48/695 (6%)
Query: 47 PSSGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPR--QVP 104
P S IR+++L F+ S+GH LPS SL+ DPT L T+AGM FKP F+G P+ VP
Sbjct: 6 PRSTAEIREKYLQFFESKGHLRLPSHSLIAPDPTTLFTVAGMQPFKPQFMGSAPKFSGVP 65
Query: 105 ----RAATSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE-- 158
R T+Q+CIR D+ENVGRT RH + FEMLGNFSFGDYFK++AI WAWEF T
Sbjct: 66 GEHRRVTTAQKCIRVGDIENVGRTRRHLSLFEMLGNFSFGDYFKRDAIHWAWEFLTGPEW 125
Query: 159 FGLPANRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNS-----GATGPCGPC 213
GL A++L++++YEDDDEAF W +E+G+ H+ R GAD+NFW + G GPCGPC
Sbjct: 126 MGLDASKLYVTIYEDDDEAFGYWTQEIGLDPSHVHRFGADENFWPADAPLKGPNGPCGPC 185
Query: 214 SEIYYDFHP----DRGCSDVDLGDDTRFIEFYNLVFMQYNKKD---DGS--LEPLKQKNI 264
SEIY+D P D + RF+E +NLVF Q++++D DGS L L KNI
Sbjct: 186 SEIYFDRGPAYGDDSWADYATTRESARFLEIWNLVFPQFDRQDPAADGSPVLADLPFKNI 245
Query: 265 DTGLGLERIARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRA 324
DTG+GLERIA ++Q VP+ Y D+ P++++ +EL+ Y +++ ++I +H+R+
Sbjct: 246 DTGMGLERIASVVQDVPDFYSNDVFKPLVERVAELSGKPY---EGEVSVSHRVIAEHVRS 302
Query: 325 IVYLLSDGVFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELS 384
+ ++DGV SN GRGYV+R+++RRA R LLG++ L + +E
Sbjct: 303 VTMTVADGVVLSNTGRGYVIRKILRRASRHAYLLGLRE--------PTLHKLVPLVVEAM 354
Query: 385 THIDSDVKAREQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQD 444
+V++ R+ ++ EE RF++TLE G LD +L E G+ LSG++
Sbjct: 355 GGAYPEVRSEAARVEAAIRSEEERFLRTLESGMGRLDALLGKM-----ERGAT--LSGEE 407
Query: 445 AFLLYDTFGFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSV-DDSADL 503
AF LY T+GFP+++T+E+AEE+GVSVD GFD +E + ++A K + A++
Sbjct: 408 AFTLYGTYGFPLDLTREIAEEYGVSVDEAGFDKALEADQELARAGSKYGKSELFGVVAEV 467
Query: 504 AEKIPDTEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDY 563
+P T F+GYD L A+ V +++ G+P+ +++ GS+ +V+L+RTP YAE GG++GD
Sbjct: 468 LGDLPATTFVGYDELEAEGRVLAIVSGGEPLSRLTAGSEAQVVLDRTPMYAEGGGEVGDT 527
Query: 564 GFLYVTQGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKV 623
G L G + AV+ D +K+ G VF+H + G L G EV A+V+P RQ +
Sbjct: 528 GVLTWDGG---EAAVL---DTRKTPGGVFLHTVEVLHGELSEGAEVRALVNPD-RQATER 580
Query: 624 HHTATHLLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGD 683
HHTATHLL AAL+ V+G QAGSLVA DRLRFDF L E+ ++E L+N W+
Sbjct: 581 HHTATHLLHAALRAVLGSGVRQAGSLVAPDRLRFDFTHGSALSADEVAQVEALVNRWVTA 640
Query: 684 ANLLQTKVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+ + M +D+A+ +GA+A+FGEKYG++V++ S
Sbjct: 641 DFPVTWRTMPIDEARASGAMALFGEKYGDEVRVVS 675
>gi|83951874|ref|ZP_00960606.1| alanyl-tRNA synthetase [Roseovarius nubinhibens ISM]
gi|83836880|gb|EAP76177.1| alanyl-tRNA synthetase [Roseovarius nubinhibens ISM]
Length = 888
Score = 554 bits (1428), Expect = e-155, Method: Compositional matrix adjust.
Identities = 296/678 (43%), Positives = 426/678 (62%), Gaps = 36/678 (5%)
Query: 51 DSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATS 109
+ IR FL+FY H+++ S+ LVP DPT++ T +GM+QFK +F G R RA TS
Sbjct: 5 NEIRSTFLNFYERNDHQIVESSPLVPRNDPTLMFTNSGMVQFKNLFTGVETRDYSRATTS 64
Query: 110 QRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANR 165
Q+C+R ND++NVG T+RHHTFFEMLGNFSFGDYFK++AI +AW+ T +FGL ++
Sbjct: 65 QKCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKEQAIPYAWDLLTKDFGLNKDK 124
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPD-- 223
L ++VY DDEA EIW K G+ + I R+ DDNFW+ G TGPCGPC+EI+YD P+
Sbjct: 125 LLVTVYHTDDEAAEIWKKYAGLSDDRIIRIATDDNFWSMGPTGPCGPCTEIFYDHGPEIW 184
Query: 224 RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNN 283
G D RFIE +NLVFMQ + +DG++ L ++IDTG+GLERI +LQ +N
Sbjct: 185 GGPPGSPEEDGDRFIEIWNLVFMQNERFEDGTMRELDMQSIDTGMGLERIGALLQGKHDN 244
Query: 284 YETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYV 343
Y+TDL+ +I+ + A+V+ + N++ ++I DHLR+ +L++DGV PSN GRGYV
Sbjct: 245 YDTDLMRSLIEAS---AHVTSQDPDGPGNIHHRVIADHLRSSAFLIADGVMPSNEGRGYV 301
Query: 344 VRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEE-L 402
VRR++RRA+R LLG K L A + + + EL R Q +++E L
Sbjct: 302 VRRIMRRAMRHAHLLGAKDPVMHQLVPALVTQMGQAFPEL---------GRAQSLIQETL 352
Query: 403 KREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEV 462
K EE RF QTL+RG +LLD D L E ++P GQ AF LYDT+GFP+++T++
Sbjct: 353 KLEETRFKQTLDRGLRLLD----DELGGLPEGAALP---GQTAFKLYDTYGFPLDLTQDA 405
Query: 463 AEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSA--DLAEKIPDTEFLGYDTLSA 520
E G VD+ GFD M Q+ +++AA + + D + D+AE T+FLGYDT +A
Sbjct: 406 LREKGREVDVSGFDEAMAEQKAKARAAWSGSGEAADATIWFDIAESHGTTDFLGYDTETA 465
Query: 521 KAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVE 580
+ + +L+ +G V KG V+++LN+TPFYAESGGQ+GD G + +G +
Sbjct: 466 EGQIVALVADGAEVKSAGKGDSVQIILNQTPFYAESGGQVGDTGVIRSAEG------AAK 519
Query: 581 VKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIG 640
+ D +K G VF+H G + EG L G + VD R + +H+ATHLL AL+ +G
Sbjct: 520 ITDTRKVAG-VFIHIGEVTEGKLVAGAAAQLEVDHTRRTAIRANHSATHLLHEALRNALG 578
Query: 641 QETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRA 700
+Q GSL A DRLRFDF+ + + EL+++ R +N +I ++T++M DDA+
Sbjct: 579 DHVAQRGSLNAEDRLRFDFSHSKAMSADELDQVAREVNEYIRQNTRVETRIMTPDDARDI 638
Query: 701 GAIAMFGEKYGEQVKISS 718
GA A+FGEKYG++V++ S
Sbjct: 639 GAQALFGEKYGDEVRVVS 656
>gi|312135147|ref|YP_004002485.1| alanyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
gi|311775198|gb|ADQ04685.1| alanyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
Length = 879
Score = 554 bits (1428), Expect = e-155, Method: Compositional matrix adjust.
Identities = 300/673 (44%), Positives = 434/673 (64%), Gaps = 30/673 (4%)
Query: 51 DSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLG--KVPRQVPRAA 107
D IR++FL F+ S+GH LPS SL+P+ D ++LL AGM KP FLG + PR+ R
Sbjct: 4 DEIREKFLQFFESKGHLRLPSFSLIPKNDKSLLLINAGMAPLKPYFLGIEEPPRR--RIT 61
Query: 108 TSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
T Q+CIRT D++ VG+T+RH TFFEMLGNFSFGDYFK+EAI WAWEF T LP RLW
Sbjct: 62 TCQKCIRTPDIDRVGKTARHATFFEMLGNFSFGDYFKREAIIWAWEFVTEVLKLPRERLW 121
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCS 227
+++YE+DDEAFEIW+KEVG+ + IKRMG +DNFW G TGPCGPCSEIY+D D+GC
Sbjct: 122 VTIYEEDDEAFEIWHKEVGLEPQRIKRMGKEDNFWEIG-TGPCGPCSEIYFDRGEDKGCG 180
Query: 228 DVDLG---DDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNY 284
G D RF+EF+NLVF Q++K ++G LK NIDTG+GLERIA I+Q+V + +
Sbjct: 181 KPTCGIGCDCDRFVEFWNLVFTQFDKDENGVYHRLKNPNIDTGMGLERIAAIMQEVDSLF 240
Query: 285 ETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVV 344
+ D++ I K E+ + Y + ++ ++++++I DH+R IV+++ DG+ PSN GRGYV+
Sbjct: 241 DIDIVKAIRDKVCEVTSYEYRKDTEK-DVSVRVITDHIRGIVFMIGDGILPSNEGRGYVL 299
Query: 345 RRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKR 404
RRLIRRA R GR+LG K AFL I + IE + ++ + + I + L
Sbjct: 300 RRLIRRASRHGRMLGKK--------EAFLHLIVDTVIESYKNSYPELVQKVEYIKKVLYN 351
Query: 405 EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAE 464
EE RF QT++ G ++L+ + + L + +E+ L+G+ AF +YDT+GFP+++TKE+A
Sbjct: 352 EESRFNQTIDVGLEILENEI-EKLKKNKET----ILNGEIAFKMYDTYGFPLDLTKEIAA 406
Query: 465 EHGVSVDMKGFDIEMENQRRQSQAAHNAVK-LSVDDSADLAEKIPDTEFLGYDTLSAKAI 523
E G+ VD + FD M+ Q+ +++AA ++ + D + ++ +T F+GY+TL ++
Sbjct: 407 EKGIIVDQERFDELMQQQKERARAAQKELENVGWKDINIVIDEDIETVFVGYETLKQESK 466
Query: 524 VESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKD 583
+ + + + V + V+L++TPFYAESGGQI D G L + + EV D
Sbjct: 467 ILKIFMESEEVAYAKEEDVCFVILDKTPFYAESGGQIADKGIL------EGEGVLAEVLD 520
Query: 584 VKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQET 643
VKK +HK + +G + V V A VD LR +HTATHLL +AL+K++GQ
Sbjct: 521 VKKGPKGTILHKVKVLKGEISVLSSVVAKVDEDLRFATMKNHTATHLLHSALRKILGQHA 580
Query: 644 SQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAI 703
Q+GS V+ DRLRFDF + PL + ++ EIE+++N I A ++ V LD A R GAI
Sbjct: 581 QQSGSQVSPDRLRFDFAHYEPLSEEQIIEIEKMVNNVIQQAIPVEKIVTDLDSALRMGAI 640
Query: 704 AMFGEKYGEQVKI 716
A+F EKY V++
Sbjct: 641 ALFDEKYSNLVRV 653
>gi|323526792|ref|YP_004228945.1| alanyl-tRNA synthetase [Burkholderia sp. CCGE1001]
gi|323383794|gb|ADX55885.1| alanyl-tRNA synthetase [Burkholderia sp. CCGE1001]
Length = 890
Score = 554 bits (1428), Expect = e-155, Method: Compositional matrix adjust.
Identities = 303/692 (43%), Positives = 425/692 (61%), Gaps = 47/692 (6%)
Query: 43 SQDFPS---SGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGK 98
SQD P IR++FL F+ S+GH ++ S+SLVP DPT+L T +GM+QFK +FLG
Sbjct: 9 SQDRPPHAMKAAEIREKFLKFFESKGHTIVRSSSLVPGNDPTLLFTNSGMVQFKDVFLGA 68
Query: 99 VPRQVPRAATSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEF 154
R RA T+QR +R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI +AWE
Sbjct: 69 ESRPYSRATTAQRSVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAIHYAWEL 128
Query: 155 STVEFGLPANRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGAT 207
T + LP +LW++VY++DDEA +IW KEVGVPVE I R+G A DNFW T
Sbjct: 129 LTGVYQLPKEKLWVTVYQEDDEAHDIWAKEVGVPVERIIRIGDNKGARYASDNFWQMADT 188
Query: 208 GPCGPCSEIYYDFHPD--RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNID 265
GPCGPCSEI+YD P+ G D R+IE +NLVFMQ+N+ G++ PL ++ +D
Sbjct: 189 GPCGPCSEIFYDHGPEVWGGPPGSPEEDGDRYIEIWNLVFMQFNRDAQGNMTPLPKQCVD 248
Query: 266 TGLGLERIARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAI 325
TG+GLERIA +LQ V +NYE DL +IK A+ VS D TN +LK+I DH+RA
Sbjct: 249 TGMGLERIAAVLQHVHSNYEIDLFQALIKAAARETGVS-----DLTNNSLKVIADHIRAC 303
Query: 326 VYLLSDGVFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELST 385
+L+ DGV P N GRGYV+RR++RRA+R G LG K G+F + +E
Sbjct: 304 SFLIVDGVIPGNEGRGYVLRRIVRRAIRHGYKLGKK--------GSFFHRMVADLVEQMG 355
Query: 386 HIDSDVKAREQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDA 445
++K +QR+ + L++EE RF +T+E G +L+ LA+ + R++ L G+ A
Sbjct: 356 SAYPELKDAQQRVTDVLRQEEERFFETIEHGMSILENALAELEKKGRKT-----LDGELA 410
Query: 446 FLLYDTFGFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAE 505
F L+DT+GFP+++T +V E V+VD FD M QR Q++AA K+ + L
Sbjct: 411 FKLHDTYGFPLDLTADVCREREVTVDEAAFDEAMARQREQARAA-GKFKM----AQGLEY 465
Query: 506 KIPDTEFLGYDTLS-AKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYG 564
T F GY+ + A V +L V+G V +V++G V+L+ TPFYAESGGQ+GD G
Sbjct: 466 SGAKTTFHGYEEIVFDDAKVVALYVDGASVQEVAQGQQAVVVLDHTPFYAESGGQVGDQG 525
Query: 565 FLYVTQGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVH 624
L + V D K V H GT+ +G+L+VG V+A +D R R +
Sbjct: 526 LL------ANASVRFAVADTLKVQADVVGHHGTLEQGILKVGDVVKAEIDAVRRARTARN 579
Query: 625 HTATHLLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDA 684
H+ATHL+ AL++V+G Q GSLV D+ RFDF + P+ D ++ +E ++N +
Sbjct: 580 HSATHLMHKALREVLGSHVQQKGSLVDPDKTRFDFAHNAPMTDEQIRRVEEIVNAEVLAN 639
Query: 685 NLLQTKVMALDDAKRAGAIAMFGEKYGEQVKI 716
+VM D+A + GA+A+FGEKYG++V++
Sbjct: 640 APGIVRVMPFDEAVKGGAMALFGEKYGDEVRV 671
>gi|422340360|ref|ZP_16421311.1| alanine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
F0401]
gi|355369353|gb|EHG16749.1| alanine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
F0401]
Length = 867
Score = 554 bits (1428), Expect = e-155, Method: Compositional matrix adjust.
Identities = 287/674 (42%), Positives = 430/674 (63%), Gaps = 35/674 (5%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
+G+ IR++F++F+ + HK SASL+P+DPT+LLT+AGM+ FKP FLG+ PR T
Sbjct: 3 TGNEIREKFIEFFMQKQHKHFESASLIPDDPTLLLTVAGMVPFKPYFLGQKEAPCPRVTT 62
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
Q+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFKKEAI+W+WEF T + ++LW+
Sbjct: 63 YQKCIRTNDLENVGRTARHHTFFEMLGNFSFGDYFKKEAIKWSWEFVTEVLKINKDKLWV 122
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYD----FHPDR 224
+V+ DDEA +IW +E P E I RMG +N+W++G TG CGPCSEI+ D + D
Sbjct: 123 TVFTTDDEAEKIWIEECNFPKERIVRMGESENWWSAGPTGSCGPCSEIHVDLGVQYGGDE 182
Query: 225 GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNY 284
D G D RFIE +NLVF ++N+ +DGSLEPL +KNIDTG GLERIA ++Q NN+
Sbjct: 183 NSKIGDEGTDNRFIEIWNLVFTEWNRMEDGSLEPLPKKNIDTGAGLERIAAVVQGKANNF 242
Query: 285 ETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVV 344
ETDL+FPI+++A+++ Y + N + +LK+I DH RA+ +L++DGV PSN GRGY++
Sbjct: 243 ETDLLFPILEEAAKITGSQYGK-NPEIDFSLKVITDHARAVTFLVNDGVIPSNEGRGYIL 301
Query: 345 RRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKR 404
RR++RRAVR GRLLG F+ + +K +E D++ + I + +K
Sbjct: 302 RRILRRAVRHGRLLGYT--------DLFMYKMIDKVVEKFEIAYPDLRKNLENIRKIVKI 353
Query: 405 EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAE 464
EE +F TL++G +L++Q + + L+ + +L G+ +F LYDT+GFP E+T+E+AE
Sbjct: 354 EEEKFSNTLDQGIQLVNQEIDNLLANGKN-----KLDGEISFKLYDTYGFPYELTEEIAE 408
Query: 465 EHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDS--ADLAEKIPDTEFLGYDTLSAKA 522
E G++V + F+ +ME Q+ ++++A V DS + +K TEF GY+ +
Sbjct: 409 ERGITVLREEFEAKMEEQKEKARSAREVVMEKGQDSFIEEFYDKYGVTEFTGYEKTEDEG 468
Query: 523 IVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVK 582
+ SL + +K ++ ++TPFYAESGGQ+GD G + N + V++V+
Sbjct: 469 KLLSL--------REAKDGKYLLIFDKTPFYAESGGQVGDQGKIC---SDNFEAKVLDVQ 517
Query: 583 DVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQE 642
K +F+H G+ E + + VD R +HTATHLL AL++V+G
Sbjct: 518 KQK----DIFIHTVEFERGMAEENKTYKLEVDSIKRLDTAKNHTATHLLHKALREVVGTH 573
Query: 643 TSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGA 702
QAGSLV ++LRFDF+ + L +L +IE ++N I + + +++AK+ GA
Sbjct: 574 VQQAGSLVDSEKLRFDFSHYEALTAEQLSKIEDIVNEKIREGIEVAVSHHTIEEAKKLGA 633
Query: 703 IAMFGEKYGEQVKI 716
+ +FG+KYG+ V++
Sbjct: 634 MMLFGDKYGDVVRV 647
>gi|359143850|ref|ZP_09178065.1| alanyl-tRNA synthetase [Streptomyces sp. S4]
Length = 890
Score = 554 bits (1428), Expect = e-155, Method: Compositional matrix adjust.
Identities = 307/678 (45%), Positives = 421/678 (62%), Gaps = 33/678 (4%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQRC 112
IR+R+L F+ RGH V+PSASL+ +DPT+LL AGM+ FKP FLG+ PRA + Q+C
Sbjct: 6 IRRRWLRFFEERGHAVVPSASLIADDPTLLLVPAGMVPFKPYFLGEATPPAPRATSVQKC 65
Query: 113 IRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE-----FGLPANRLW 167
+RT D+E VG+T+RH TFF+M GNFSFGDYFK+ AI +AWE T +GL RLW
Sbjct: 66 VRTPDIEEVGKTTRHGTFFQMCGNFSFGDYFKEGAITYAWELLTTSQEQGGYGLDPERLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCS 227
I+VY DDDEA IW +++GVP E I+R+G DNFW+ G GPCGPCSEI YD P+ G
Sbjct: 126 ITVYLDDDEAETIWREKIGVPAERIQRLGKKDNFWSMGVPGPCGPCSEINYDRGPEFGVE 185
Query: 228 DVDLGDDTRFIEFYNLVFMQY------NKKDDGSLEPLKQKNIDTGLGLERIARILQKVP 281
+D R++E +NLVFMQY +K++ L L KNIDTGLGLER+A ILQ V
Sbjct: 186 GGPAVNDERYVEIWNLVFMQYERGAGEDKENFPILGDLPSKNIDTGLGLERLAMILQDVR 245
Query: 282 NNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRG 341
N YE D +I KA+EL V Y ++ ++++L+++ DH+R V L+ DGV P N GRG
Sbjct: 246 NLYEIDTSRIVIDKATELTGVQYG-ADQASDVSLRVVTDHMRTSVMLIGDGVTPGNEGRG 304
Query: 342 YVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEE 401
YV+RR++RRAVR RLLG G L + S+ ++ EL T +RIL
Sbjct: 305 YVLRRIMRRAVRNMRLLGATGPVVAELVDTVIESMGQQYPELITE--------RKRILTV 356
Query: 402 LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKE 461
EE F++ L+ G +LD A++ T+ +GS LSG AFLL+DT+GFP+++T E
Sbjct: 357 ALAEEAAFLKALKGGTNILDT----AVTETKAAGSTV-LSGDKAFLLHDTWGFPIDLTLE 411
Query: 462 VAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLS-VDDSA--DLAEKIPDTEFLGYDTL 518
+A E G+SVD GF M+ QR +++A A K D SA ++A+ T+F GY
Sbjct: 412 MAAEQGLSVDEPGFRRLMKEQRERAKADARAKKTGHADLSAYREVADAAGATDFTGYLAT 471
Query: 519 SAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAV 578
++ V LLV+G ++G +VE++L+RTPFYAE GGQI D G + G AV
Sbjct: 472 EGESTVVGLLVDGVSSPAATEGDEVEIVLDRTPFYAEGGGQIADTGRIRFDNG-----AV 526
Query: 579 VEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKV 638
VEV+DV+K + V VHKG ++ G + VG A +D R+ H+ATHL AL+
Sbjct: 527 VEVRDVQKPVPGVHVHKGVVQVGEVTVGSPAYAAIDVGRRRAIARAHSATHLTHQALRDA 586
Query: 639 IGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAK 698
+G +QAGS R RFDF + L ++E+ IN + +Q +VM++DDAK
Sbjct: 587 LGPTAAQAGSENQPGRFRFDFGSPAAVPGAVLTDVEQKINEVLARDLDVQAEVMSIDDAK 646
Query: 699 RAGAIAMFGEKYGEQVKI 716
+ GAIA FGEKYGE+V++
Sbjct: 647 KQGAIAEFGEKYGERVRV 664
>gi|146341851|ref|YP_001206899.1| alanyl-tRNA synthetase [Bradyrhizobium sp. ORS 278]
gi|205829995|sp|A4YXQ6.1|SYA_BRASO RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|146194657|emb|CAL78682.1| alanyl-tRNA synthetase [Bradyrhizobium sp. ORS 278]
Length = 891
Score = 554 bits (1428), Expect = e-155, Method: Compositional matrix adjust.
Identities = 302/681 (44%), Positives = 427/681 (62%), Gaps = 41/681 (6%)
Query: 51 DSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATS 109
+ IR FL+F+A+ GH+++PS+ LVP DPT++ T AGM+QFK +F G R RA TS
Sbjct: 5 NEIRSTFLNFFAANGHEIVPSSPLVPRNDPTLMFTNAGMVQFKNVFTGVEKRPYHRATTS 64
Query: 110 QRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANR 165
Q+C+R ND++NVG T+RHHTFFEMLGNFSFGDYFK+ AI+ AW+ T EFGLP ++
Sbjct: 65 QKCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKENAIELAWKLVTKEFGLPKDK 124
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDR- 224
L +VY DDDEAF +W K G+P I R+ DNFW G TGPCGPCSEI+YD H D+
Sbjct: 125 LTATVYIDDDEAFGLWKKIAGLPESRIIRIAGSDNFWQMGDTGPCGPCSEIFYD-HGDKI 183
Query: 225 -----GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQK 279
G ++ D GD RFIE +NLVFMQY + + G PL + +IDTG GLER+A +LQ
Sbjct: 184 WGGPPGSAEAD-GD--RFIEIWNLVFMQYEQLEGGVRNPLPKPSIDTGAGLERVAAVLQG 240
Query: 280 VPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIG 339
+NY+ DL +I+ ++L N A +L++I DHLRA +L+SDGV PSN G
Sbjct: 241 KHDNYDIDLFVALIRAIADLTN---ADPQGPQKASLRVIADHLRASSFLISDGVLPSNEG 297
Query: 340 RGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRIL 399
RGYV+RR++RRA+R +LLG + L GA + + EL ++A E I
Sbjct: 298 RGYVLRRIMRRAMRHAQLLGAREPLMHKLVGALTREMGQAYPEL-------IRA-EGLIK 349
Query: 400 EELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEIT 459
E L+ EE RF +TLERG +LD+ A +LS+ G AF LYDT+GFP+++T
Sbjct: 350 ETLRLEETRFRKTLERGLAILDEKSA-SLSKG------DMFDGDVAFTLYDTYGFPLDLT 402
Query: 460 KEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSA--DLAEKIPDTEFLGYDT 517
++ + G+SVD F ME Q+ +++AA + ++ L EK+ TEFLGY+T
Sbjct: 403 QDALKSRGISVDQASFTDAMERQKAKARAAWAGSGEAATETVWFPLREKLGATEFLGYET 462
Query: 518 LSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTA 577
+A+ V +L+ +G V + G ++LN+TPFY ESGGQ+GD G L +
Sbjct: 463 ETAEGAVTALVKDGAEVDSLKAGESGAIVLNQTPFYGESGGQVGDTGVL------TGEGV 516
Query: 578 VVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKK 637
V + D +K G +F H GT+ +G L++G ++ VD R + +H+ATH+L AL++
Sbjct: 517 RVRITDTQKKAGDLFAHIGTVEQGTLKLGTPLQLDVDHIRRSAIRANHSATHILHEALRQ 576
Query: 638 VIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDA 697
V+G +Q GSLV+ DRLRFDF +P+ EL +E + N + + + T++M LDDA
Sbjct: 577 VLGDHIAQRGSLVSPDRLRFDFVHPKPITAEELARVEDIANDVVLENAEVTTRLMGLDDA 636
Query: 698 KRAGAIAMFGEKYGEQVKISS 718
+ AGA A+FGEKYG++V++ S
Sbjct: 637 REAGARALFGEKYGDEVRVVS 657
>gi|359427652|ref|ZP_09218699.1| alanyl-tRNA synthetase [Acinetobacter sp. NBRC 100985]
gi|358236875|dbj|GAB00238.1| alanyl-tRNA synthetase [Acinetobacter sp. NBRC 100985]
Length = 882
Score = 554 bits (1428), Expect = e-155, Method: Compositional matrix adjust.
Identities = 306/693 (44%), Positives = 436/693 (62%), Gaps = 51/693 (7%)
Query: 43 SQDFPSSGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPR 101
S F +S + IR+ FL ++ S+GH + S+SLVP DPT+L T AGM QFK FLG R
Sbjct: 2 STRFMTSAE-IREAFLRYFESQGHTRVASSSLVPANDPTLLFTNAGMNQFKDCFLGLEKR 60
Query: 102 QVPRAATSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTV 157
RA +SQ+C+R ND++NVG T+RHHTFFEMLGNFSFGDYFK+ A+++AWEF T
Sbjct: 61 DYIRAVSSQKCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKQNALKFAWEFLTS 120
Query: 158 E--FGLPANRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATG 208
E GLP +RL+++VY DDEAF+IWNKE+GV E I R+G A DNFW G TG
Sbjct: 121 EQWLGLPKDRLYVTVYHTDDEAFDIWNKEIGVDAERIIRIGDNKGGQYASDNFWAMGDTG 180
Query: 209 PCGPCSEIYYDFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNID 265
PCGPCSEI+YD H D G D RFIE +N VFMQ+N+ DG + PL ++D
Sbjct: 181 PCGPCSEIFYD-HGDHIWGGLPGTPEEDGDRFIEIWNNVFMQFNRTADGVMHPLPAPSVD 239
Query: 266 TGLGLERIARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAI 325
TG+GLERI+ +LQ V +NYE DL ++K A+++ + + +L+++ DH R+
Sbjct: 240 TGMGLERISAVLQHVNSNYEIDLFQHLLKAAADIIGI-----QEEGQPSLRVLADHARSC 294
Query: 326 VYLLSDGVFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELST 385
+L++DGV PSN GRGYV+RR+IRRAVR G LG G F + + IE+
Sbjct: 295 CFLIADGVNPSNEGRGYVLRRIIRRAVRHGNKLGATG--------TFFYKMLQPLIEVMG 346
Query: 386 HIDSDVKAREQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDA 445
++ R+ I L REE +F +TLE+G KLL+ LA + G+V ++G+
Sbjct: 347 EAYPELVTRKDVIEATLIREEEQFAKTLEQGLKLLEGELA------QLKGNV--IAGETV 398
Query: 446 FLLYDTFGFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAE 505
F LYDT+GFP ++T ++A E +++D GF++EM QR Q A +A K +VD ++ + +
Sbjct: 399 FKLYDTYGFPTDLTADIARERDLTIDEAGFEVEMAAQR---QRARDAGKFAVDYNS-IVK 454
Query: 506 KIPDTEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGF 565
+T+F GYD + + ++ +G V +V++G + ++LN+TPFYAESGGQIGD G
Sbjct: 455 VEGETQFDGYDATQGQGQIVAIYKDGIQVDEVNEGDEALIVLNQTPFYAESGGQIGDTGI 514
Query: 566 LYVTQGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHH 625
T + EV+D KKS G FVH+G + G L+ + VEA V LR +H
Sbjct: 515 F------KNDTGIFEVQDTKKS-GGAFVHQGIVTVGSLKTSQNVEATVKADLRDATARNH 567
Query: 626 TATHLLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDAN 685
+ATHLL AAL++++G Q GSLVA D LRFDF +P+ ++++IERL+N +
Sbjct: 568 SATHLLHAALRQILGDHVQQKGSLVASDILRFDFANDQPVTFEQIQQIERLVNAEVISNT 627
Query: 686 LLQTKVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+ T+++ ++ AK GA+ +FGEKYGE+V++ S
Sbjct: 628 PVTTELLDIESAKAKGAMMLFGEKYGEEVRVLS 660
>gi|375266642|ref|YP_005024085.1| alanyl-tRNA synthetase [Vibrio sp. EJY3]
gi|369841962|gb|AEX23106.1| alanyl-tRNA synthetase [Vibrio sp. EJY3]
Length = 860
Score = 554 bits (1428), Expect = e-155, Method: Compositional matrix adjust.
Identities = 305/686 (44%), Positives = 423/686 (61%), Gaps = 49/686 (7%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S D +R FL F+ S+GH+++ S+SLVP DPT+L T AGM QFK FLG R RA
Sbjct: 4 STDEVRNSFLKFFESKGHQIVESSSLVPHNDPTLLFTNAGMNQFKDCFLGLEKRAYTRAT 63
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
T+QRC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI +AWEF T LP
Sbjct: 64 TAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAISFAWEFLTQVLKLPQ 123
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG--------ADDNFWNSGATGPCGPCSE 215
RL +++YE DDEAF+IWN++VGVP + I R+G DNFW G TGPCGPC+E
Sbjct: 124 ERLLVTIYETDDEAFDIWNQKVGVPADRIIRIGDKKGGKPYESDNFWQMGDTGPCGPCTE 183
Query: 216 IYYDF--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERI 273
I+YD H G D RFIE +N VFMQ+N+ DG++EPL + ++DTG+G+ERI
Sbjct: 184 IFYDHGEHIWGGRPGTPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPSVDTGMGIERI 243
Query: 274 ARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGV 333
+ I+Q V +NYE D+ +IK A+E+ V Y D +N +L++I DH+R+ +L+ DGV
Sbjct: 244 SAIMQGVHSNYEIDVFQTLIKAAAEV--VGY---EDLSNQSLRVIADHIRSCSFLIVDGV 298
Query: 334 FPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKA 393
PSN GRGYV+RR+IRRAVR G LG +G L G + EL
Sbjct: 299 MPSNEGRGYVLRRIIRRAVRHGNKLGAQGVFFYKLVGVLAEVMGTAGEELK--------- 349
Query: 394 REQRILEELKR-EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTF 452
R+Q ++E++ R EE F +TL+RG +L++ L + + L G+ F LYDT+
Sbjct: 350 RQQAVVEKVLRIEEENFGRTLDRGMSILNEALDNLDGK--------ELDGETVFKLYDTY 401
Query: 453 GFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEF 512
GFP ++T +VA E ++D +GF+ ME QR Q A A + D +A + +TEF
Sbjct: 402 GFPADLTNDVAREREFTIDEEGFEKAMEEQR---QRAREAGQFGTDYNATIKVD-AETEF 457
Query: 513 LGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGT 572
GY + VE++ V G V +S G ++L TPFYAESGGQ GD G + G
Sbjct: 458 CGYTGTKGSSSVEAMFVEGNEVESLSAGDKAIIVLGETPFYAESGGQCGDAGEIRTESG- 516
Query: 573 NQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQ 632
V V+D +K LG+ H G + EGVL G +V IVD + R ++H+ATHLL
Sbjct: 517 -----VFRVEDTQK-LGNAIAHYGVMAEGVLAKGDDVATIVDAERRAATSLNHSATHLLH 570
Query: 633 AALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVM 692
AL++V+G+ Q GSLV + LRFDF+ + EL+E+ERL+N I + ++T +M
Sbjct: 571 EALRRVLGEHVLQKGSLVRPENLRFDFSHLEAVTAAELKEVERLVNAQIRRNHSIETNIM 630
Query: 693 ALDDAKRAGAIAMFGEKYGEQVKISS 718
++ AK+ GA+A+FGEKY ++V++ S
Sbjct: 631 DIESAKQKGAMALFGEKYDDEVRVLS 656
>gi|163856313|ref|YP_001630611.1| alanyl-tRNA synthetase [Bordetella petrii DSM 12804]
gi|205829993|sp|A9IK31.1|SYA_BORPD RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|163260041|emb|CAP42342.1| alaS2 [Bordetella petrii]
Length = 873
Score = 554 bits (1428), Expect = e-155, Method: Compositional matrix adjust.
Identities = 307/682 (45%), Positives = 413/682 (60%), Gaps = 52/682 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR++FL F+ S+GH ++PSASLVP DPT+L T +GM+QFK +F GK R RA +SQR
Sbjct: 6 IRQKFLQFFQSKGHTIVPSASLVPGNDPTLLFTNSGMVQFKDVFTGKETRSYTRATSSQR 65
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AIQ+AWE T + LPA +LW
Sbjct: 66 SVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAIQYAWELLTQVYKLPAEKLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYYDF 220
++VY++DD+A++IW EVGVP E I R+G A DNFW TGPCGPCSEI+YD
Sbjct: 126 VTVYQEDDQAYDIWATEVGVPRERIIRIGDNKGSRYASDNFWQMADTGPCGPCSEIFYDH 185
Query: 221 HPD--RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQ 278
PD G D R+IE +NLVFMQ+ + G++ PL + +DTG+GLERIA +LQ
Sbjct: 186 GPDVWGGPPGSPEEDGDRYIEIWNLVFMQFERDAAGNMTPLPKPCVDTGMGLERIAAVLQ 245
Query: 279 KVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNI 338
V +NYE DL +I+ A+ V+ + N +LK+I DH+RA +L+ DGV PSN
Sbjct: 246 GVHSNYEIDLFQNLIRAAARETGVTNLEDN-----SLKVIADHIRACAFLIVDGVIPSNE 300
Query: 339 GRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRI 398
GRGYV+RR++RRA+R G L G + F + + E+ +A E R+
Sbjct: 301 GRGYVLRRIVRRALRHGYKL-------GQTKPFFYKLVPDLVAEMGQAYPELTQAAE-RV 352
Query: 399 LEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVP---RLSGQDAFLLYDTFGFP 455
+ LK+EE RF +TLE G K+LD LA VP +L G F LYDT+GFP
Sbjct: 353 AQVLKQEEERFGETLEHGMKILDGALA----------GVPAGGQLDGTTLFTLYDTYGFP 402
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGY 515
V++T ++ E V VDM GFD M QR Q++AA K + + L+ + DT F GY
Sbjct: 403 VDLTADICRERNVEVDMAGFDAAMARQRDQARAAG---KFKMAEG--LSYEGADTRFEGY 457
Query: 516 DTLSAKAI-VESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQ 574
+ L + V +L V+G V +V G V+L+ TPFYAESGGQ+GD G L
Sbjct: 458 EKLELDGVKVAALYVDGTQVERVQAGQHAVVVLDATPFYAESGGQVGDTGLL------ES 511
Query: 575 QTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAA 634
A V D K VF H G + G L VG + A VD R R +H+ATHL+ A
Sbjct: 512 GGARFAVADTLKIQAGVFGHHGVLESGSLAVGDTLLARVDAVRRARTVRNHSATHLMHKA 571
Query: 635 LKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMAL 694
L++V+G Q GSLV D+ RFDF PL ++ ++E ++N + Q +VMA
Sbjct: 572 LRQVLGAHVQQRGSLVDPDKTRFDFAHDAPLSAEQIAQVEAIVNAEVLANQPTQARVMAY 631
Query: 695 DDAKRAGAIAMFGEKYGEQVKI 716
DDA + GA+A+FGEKYG+ V++
Sbjct: 632 DDAVKGGAMALFGEKYGDTVRV 653
>gi|386826904|ref|ZP_10114011.1| alanine--tRNA ligase [Beggiatoa alba B18LD]
gi|386427788|gb|EIJ41616.1| alanine--tRNA ligase [Beggiatoa alba B18LD]
Length = 868
Score = 554 bits (1427), Expect = e-155, Method: Compositional matrix adjust.
Identities = 303/678 (44%), Positives = 423/678 (62%), Gaps = 47/678 (6%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
+R++FL+++AS+GH ++ S+ LVP DPT+L T AGM+QFK FLG R RA T QR
Sbjct: 7 LRQKFLNYFASKGHTIVSSSPLVPGNDPTLLFTNAGMVQFKDTFLGLEKRDYKRAVTCQR 66
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK+EAIQ+AWEF T E GLP +LW
Sbjct: 67 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKREAIQFAWEFLTKELGLPPEKLW 126
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYD-----FHP 222
++VYE+D EA +IW KE+ + R G NFW G TGPCGPCSEI+YD F
Sbjct: 127 VTVYEEDREAEDIWLKEMKIDPTRFSRCGKHSNFWMMGDTGPCGPCSEIFYDHGEGIFGG 186
Query: 223 DRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPN 282
G D D GD R+IE +NLVFMQ+N+ +G+L PL ++DTG+GLER+A +LQ V +
Sbjct: 187 PPGSPDED-GD--RYIEIWNLVFMQFNRDTNGTLTPLPHPSVDTGMGLERLAAVLQHVHS 243
Query: 283 NYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGY 342
NYE DL ++K E+ N S D +N +L++I DH+RA +L+ DGV PSN GRGY
Sbjct: 244 NYEIDLFQALLKAVGEITNRS-----DYSNSSLRVIADHIRACAFLIVDGVIPSNEGRGY 298
Query: 343 VVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEEL 402
V+RR+IRRAVR G LG+ L A + EL D + L
Sbjct: 299 VLRRIIRRAVRHGYKLGLHEPFFYRLVAALDKEMGAAYPELRQATD--------LVSRLL 350
Query: 403 KREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEV 462
K+EE RF +TL G LL++ + T +G V F LYDT+GFP ++T ++
Sbjct: 351 KQEEERFAETLSHGMVLLNEAMQHLKGSTVIAGEV-------VFKLYDTYGFPTDLTADI 403
Query: 463 AEEHGVSVDMKGFDIEMENQR-RQSQAAHNAVKLS-VDDSADLAEKIPDTEFLGYDTLSA 520
A EH +S+D +GF+ M QR R +A H V LS V +AD + F GY+ ++
Sbjct: 404 AREHQLSIDAEGFERCMNEQRTRAREAGHFKVDLSNVALTADC-----QSTFTGYEAVAG 458
Query: 521 KAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVE 580
+ + +L ++G V +++ G +++L++TPFYAESGGQ GD G L + A+
Sbjct: 459 EGTITALFLDGHEVEQLNAGQTGQIILDQTPFYAESGGQAGDKGQL------SNVNALFT 512
Query: 581 VKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIG 640
V D +K +G H G + +G L G +++A +D RQ HH+ATHLL AAL++V+G
Sbjct: 513 VSDTQK-IGHANAHIGKLTQGTLRKGDKLQAQIDVVARQATARHHSATHLLHAALRQVLG 571
Query: 641 QETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRA 700
+ Q GS V +RLRFDF+ + + +L +IER++N I + +++QTKVM LDDA ++
Sbjct: 572 EHVKQKGSSVDAERLRFDFSHYEAITPEQLAQIERIVNEKILNNSVVQTKVMNLDDAVKS 631
Query: 701 GAIAMFGEKYGEQVKISS 718
GA+A+FGEKY + V++ S
Sbjct: 632 GAMALFGEKYEDDVRVLS 649
>gi|50084439|ref|YP_045949.1| alanyl-tRNA synthetase [Acinetobacter sp. ADP1]
gi|59798530|sp|Q6FCT2.1|SYA_ACIAD RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|49530415|emb|CAG68127.1| alanyl-tRNA synthetase [Acinetobacter sp. ADP1]
Length = 878
Score = 554 bits (1427), Expect = e-155, Method: Compositional matrix adjust.
Identities = 304/683 (44%), Positives = 433/683 (63%), Gaps = 50/683 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FL ++ S+GH + S+SLVP DPT+L T AGM QFK FLG R RA TSQ+
Sbjct: 6 IREAFLRYFESQGHTRVASSSLVPANDPTLLFTNAGMNQFKDCFLGLEKRDYVRATTSQK 65
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND++NVG T+RHHTFFEMLGNFSFGDYFK++A+ +AW+F T E GLP ++
Sbjct: 66 CVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKRDALTFAWDFLTSEQWLGLPKDK 125
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
L+++VY DDEA++IWNKE+G+ + I R+G A DNFW G TGPCGPCSEI++
Sbjct: 126 LYVTVYHTDDEAYDIWNKEIGLAADRIIRIGDNKGEKYASDNFWAMGDTGPCGPCSEIFF 185
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D RFIE +N VFMQ+N+ DG L PL ++DTG+GLERI+
Sbjct: 186 D-HGDHIWGGLPGTPEEDGDRFIEIWNNVFMQFNRTADGVLHPLPAPSVDTGMGLERISA 244
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +IK A E+ NV D +L+++ DH R+ +L++DGV P
Sbjct: 245 VLQHVNSNYDIDLFQHLIKSACEIINV-----KDEGQPSLRVVADHARSCCFLIADGVNP 299
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN GRGYV+RR+IRRAVR G LG G F + + I++ ++K +
Sbjct: 300 SNEGRGYVLRRIIRRAVRHGNKLGATG--------TFFYKMLQPLIDVMGDAYPELKNDQ 351
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
RI L REE +F +TLE+G KLL+ L T+ SG V + G+ F LYDT+GFP
Sbjct: 352 ARIEATLIREEEQFAKTLEQGLKLLEGEL------TQLSGKV--IPGETVFKLYDTYGFP 403
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGY 515
++T ++A E + +D GF+ EME QRR+ A +A K +VD ++ + + +T+F GY
Sbjct: 404 TDLTADIARERDLEIDEVGFEREMEAQRRR---ARDAGKFAVDYNS-IVKVEGETQFDGY 459
Query: 516 DTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
+ + + ++ +G+ V +V +G + ++LN+TPFYAESGGQIGD G
Sbjct: 460 HATAGQGEIVAIYKDGEQVDEVVEGDEALIVLNQTPFYAESGGQIGDTGLF------KND 513
Query: 576 TAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAAL 635
T + EV+D KKS G FVH+G + G L+ + V+AIV +R +H+ATHLL AAL
Sbjct: 514 TGIFEVQDTKKS-GGAFVHQGIVTMGSLKAAQHVDAIVKADIRAATARNHSATHLLHAAL 572
Query: 636 KKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALD 695
++++G Q GSLVA D LRFDF +P+ +L+EIERL+N + + + T+++ ++
Sbjct: 573 RQILGTHVQQKGSLVASDILRFDFANDQPVSFEQLQEIERLVNAEVIANSAVTTELLDIE 632
Query: 696 DAKRAGAIAMFGEKYGEQVKISS 718
AK GA+ +FGEKYG++V++ S
Sbjct: 633 SAKAKGAMMLFGEKYGDEVRVLS 655
>gi|330816605|ref|YP_004360310.1| Alanyl-tRNA synthetase [Burkholderia gladioli BSR3]
gi|327368998|gb|AEA60354.1| Alanyl-tRNA synthetase [Burkholderia gladioli BSR3]
Length = 874
Score = 554 bits (1427), Expect = e-155, Method: Compositional matrix adjust.
Identities = 300/679 (44%), Positives = 415/679 (61%), Gaps = 44/679 (6%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR++FL F+ S+GH ++ S+SLVP DPT+L T +GM+QFK +FLG R RA TSQR
Sbjct: 6 IREKFLKFFESKGHTIVRSSSLVPGNDPTLLFTNSGMVQFKDVFLGTESRPYSRATTSQR 65
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
+R ND+ENVG T+RHHTFFEMLGNFSFGDYFKK+AI ++WE T +GLP +LW
Sbjct: 66 SVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKKDAIHYSWELLTSVYGLPKEKLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYYDF 220
++VY DDDEA++IW KEVGVP E I R+G A DNFW G TGPCGPCSEI+YD
Sbjct: 126 VTVYHDDDEAYDIWAKEVGVPTERIIRIGDNKGARYASDNFWQMGDTGPCGPCSEIFYDH 185
Query: 221 HPD--RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQ 278
PD G D R+IE +NLVFMQ+N+ G++ L + +IDTG+GLERIA +LQ
Sbjct: 186 GPDVWGGPPGSPEEDGDRYIEIWNLVFMQFNRDAQGNMTRLPKPSIDTGMGLERIAAVLQ 245
Query: 279 KVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNI 338
V +NYE DL +IK A+ V+ D TN +LK+I DH+RA +L+ DGV P N
Sbjct: 246 HVHSNYEIDLFQNLIKAAARETGVA-----DLTNNSLKVIADHIRACSFLIVDGVIPGNE 300
Query: 339 GRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRI 398
GRGYV+RR++RRA+R G LG K GAF + + ++K E R+
Sbjct: 301 GRGYVLRRIVRRAIRHGYKLGRK--------GAFFHKLVADLVAEMGGAYPELKEAEGRV 352
Query: 399 LEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEI 458
+ L++EE RF++T+E G +LD LA+ ++ +L G+ AF L+DT+GFP+++
Sbjct: 353 TDVLRQEEERFLETIEHGMTILDAALAEL-----DAKGAKQLDGELAFKLHDTYGFPLDL 407
Query: 459 TKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTL 518
T +V E G++VD FD M QR Q++AA + L T F GY+ +
Sbjct: 408 TADVCRERGMTVDEPAFDDAMARQREQARAAGK-----FKATQGLEYSGAKTTFHGYEDI 462
Query: 519 S-AKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTA 577
+ A + +L V G V + G V+L+ TPFYAESGGQ+GD G L N T
Sbjct: 463 AFDDAKIVALYVGGTAVQQAQAGEQAVVVLDHTPFYAESGGQVGDQGVL-----ANAATR 517
Query: 578 VVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKK 637
V+D K V H GT+ +G L+VG + A +D R R + +H+ THL+ AL++
Sbjct: 518 FA-VEDTLKVQADVIGHHGTVEQGTLKVGDTLRAEIDAARRARTERNHSVTHLMHKALRE 576
Query: 638 VIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDA 697
V+G Q GSLV D+ RFDF + P+ D E+ +E ++N I + M+ D+A
Sbjct: 577 VLGSHVQQKGSLVDADKTRFDFAHNAPMSDDEIRRVEAIVNAEILANSPGIVSNMSYDEA 636
Query: 698 KRAGAIAMFGEKYGEQVKI 716
+ GA+A+FGEKYG++V++
Sbjct: 637 VKGGAMALFGEKYGDEVRV 655
>gi|169633133|ref|YP_001706869.1| alanyl-tRNA synthetase [Acinetobacter baumannii SDF]
gi|169151925|emb|CAP00779.1| alanyl-tRNA synthetase [Acinetobacter baumannii]
Length = 878
Score = 554 bits (1427), Expect = e-155, Method: Compositional matrix adjust.
Identities = 299/682 (43%), Positives = 429/682 (62%), Gaps = 48/682 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FL ++ ++GH + S+SLVP DPT+L T AGM QFK FLG R RA TSQ+
Sbjct: 6 IREAFLRYFETQGHTRVASSSLVPANDPTLLFTNAGMNQFKDCFLGLEKRDYVRATTSQK 65
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND++NVG T+RHHTFFEMLGNFSFGDYFK++A+++AWEF T E LP ++
Sbjct: 66 CVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKRDALKFAWEFLTSEQWLALPKDK 125
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
L+++VY DDEA++IWNKE+G+ E I R+G A DNFW G TGPCGPCSEI++
Sbjct: 126 LYVTVYHTDDEAYDIWNKEIGLAPERIIRIGDNKGEKYASDNFWAMGDTGPCGPCSEIFF 185
Query: 219 DF--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARI 276
D H G D RFIE +N VFMQ+N+ DG L PL ++DTG+GLERI+ +
Sbjct: 186 DHGEHIWGGLPGSPEEDGDRFIEIWNNVFMQFNRTADGVLHPLPAPSVDTGMGLERISAV 245
Query: 277 LQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPS 336
LQ V +NY+ DL ++K A+ + + D +L+++ DH R+ +L++DGV PS
Sbjct: 246 LQHVNSNYDIDLFQHLLKAAANIIGIE-----DEGQPSLRVVADHARSCCFLIADGVNPS 300
Query: 337 NIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQ 396
N GRGYV+RR+IRRAVR G LG G F + + IE+ +++AR +
Sbjct: 301 NEGRGYVLRRIIRRAVRHGNKLGATG--------TFFYKMLQPLIEVMGQAYPELEARRE 352
Query: 397 RILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPV 456
I L REE +F +TLE+G KLL+ LA +T + G F LYDT+GFP
Sbjct: 353 VIEATLIREEEQFAKTLEQGLKLLEGELAQLKDKT--------IPGATVFKLYDTYGFPT 404
Query: 457 EITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYD 516
++T ++A E G +D GF++EM QR Q AH+A K +VD + ++ + +T+F GY
Sbjct: 405 DLTADIARERGFIIDEAGFEVEMAAQR---QRAHDAGKFAVDYN-NIVKVEGETQFDGYT 460
Query: 517 TLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQT 576
+ + + ++ +G V +VS+G + ++LN+TPFYAESGGQIGD G +T
Sbjct: 461 NTTGQGQIVAIYKDGVQVDEVSEGDEALIVLNQTPFYAESGGQIGDTGIF------KNET 514
Query: 577 AVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALK 636
+ EV+D KKS G FVH+G + G L+ + VEAIV +R+ +H+ATHLL AAL+
Sbjct: 515 GIFEVQDTKKS-GGAFVHQGIVTVGNLKTSQNVEAIVKADIREATAHNHSATHLLHAALR 573
Query: 637 KVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDD 696
+++G Q GSLV D LRFDF +P+ +L+++ERL+N I + T+++ ++
Sbjct: 574 QILGSHVQQKGSLVTSDILRFDFANDQPVSFEQLQQVERLVNAEIIANTAVTTELLDIET 633
Query: 697 AKRAGAIAMFGEKYGEQVKISS 718
AK GA+ +FGEKYG++V++ S
Sbjct: 634 AKAKGAMMLFGEKYGDEVRVLS 655
>gi|404495055|ref|YP_006719161.1| alanyl-tRNA ligase [Geobacter metallireducens GS-15]
gi|418066146|ref|ZP_12703513.1| alanyl-tRNA synthetase [Geobacter metallireducens RCH3]
gi|123572914|sp|Q39Z77.1|SYA_GEOMG RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|78192680|gb|ABB30447.1| alanyl-tRNA synthetase [Geobacter metallireducens GS-15]
gi|373561080|gb|EHP87324.1| alanyl-tRNA synthetase [Geobacter metallireducens RCH3]
Length = 876
Score = 554 bits (1427), Expect = e-155, Method: Compositional matrix adjust.
Identities = 291/688 (42%), Positives = 423/688 (61%), Gaps = 50/688 (7%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
+G+ +R RFL F+ RGH V+PS+ L+P DPT+L AGM QFK FLG R RA
Sbjct: 2 TGNELRARFLKFFEDRGHTVVPSSLLIPHNDPTLLFANAGMNQFKDCFLGMEDRGYTRAT 61
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
+SQ+C+R ND+ENVGRT+RHHTFFEMLGNFSFGDYFKKEAI +AWEF T + GL
Sbjct: 62 SSQKCVRAGGKHNDLENVGRTARHHTFFEMLGNFSFGDYFKKEAIAFAWEFLTKDLGLDK 121
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPD 223
+RL+++VY DDDEA +IW+ + GVP E I R G DNFW+ G TGPCGPCSEI++D P+
Sbjct: 122 DRLYVTVYTDDDEAADIWHHQEGVPRERIFRFGEKDNFWSMGDTGPCGPCSEIFWDNGPE 181
Query: 224 RGCS--DVDLGDDT-RFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKV 280
GC D +G D R++E +N VFMQ+N+ DG++ PL + ++DTG+GLERI ++Q V
Sbjct: 182 VGCGSPDCTVGCDCDRYMEIWNNVFMQFNRSADGTMTPLPKPSVDTGMGLERICTVMQGV 241
Query: 281 PNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGR 340
+NY+TDL+ +I+ L+ Y + N++ ++++++I DH RA +L+ DGV PSN GR
Sbjct: 242 KSNYDTDLLQGVIRHVERLSGKRY-RENEKDDVSMRVIADHARATTFLICDGVLPSNEGR 300
Query: 341 GYVVRRLIRRAVRTGRLLGIKG-------DGRGNLEGAFLPSIAEKAIELSTHIDSDVKA 393
GYV+RR++RRA R ++LG D + G P + E
Sbjct: 301 GYVLRRIMRRAARHAKMLGFAEPVLYRTVDAVNEMMGGSYPELLE--------------- 345
Query: 394 REQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFG 453
RE+ I + ++ EE RF +TL+RG +L+ DA+++ + G + G+ F LYDTFG
Sbjct: 346 REEYIKKVIRAEEERFAETLDRGLAILN----DAVAQLKGEGKTV-IPGETLFRLYDTFG 400
Query: 454 FPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDS-----ADLAEKIP 508
FP ++T ++ G ++D GF+ M QR Q A K S ++ +L +
Sbjct: 401 FPTDLTADIVRAEGFTIDEPGFEACMGRQREQ---AREHWKGSGEEGIAAVHKELHNRGV 457
Query: 509 DTEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYV 568
+ F+GYD + A + S+L G V + G DVE++ +RTPFY ESGGQ GD G +
Sbjct: 458 RSVFVGYDEKCSYAAIGSILRGGSEVAEAKAGEDVEIITDRTPFYGESGGQAGDTGTI-- 515
Query: 569 TQGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTAT 628
+ +A V V + + VH+GT+ EG ++ G + V R +HTAT
Sbjct: 516 ----STGSAHVRVTGTIRPYPDLIVHRGTVVEGTIKTGEACDLKVASVDRDATARNHTAT 571
Query: 629 HLLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQ 688
HLLQ AL++V+G+ QAGSLVA DRLRFDF + E+ +E ++N +I + + +
Sbjct: 572 HLLQTALRRVLGEHVKQAGSLVAPDRLRFDFTHFAAMTPEEIRRVEEIVNTFIMENDTVH 631
Query: 689 TKVMALDDAKRAGAIAMFGEKYGEQVKI 716
+ MA+++A +GA A+FGEKYG++V++
Sbjct: 632 AREMAVEEAMESGATALFGEKYGDRVRV 659
>gi|343506705|ref|ZP_08744175.1| alanyl-tRNA synthetase [Vibrio ichthyoenteri ATCC 700023]
gi|342801808|gb|EGU37264.1| alanyl-tRNA synthetase [Vibrio ichthyoenteri ATCC 700023]
Length = 860
Score = 554 bits (1427), Expect = e-155, Method: Compositional matrix adjust.
Identities = 305/687 (44%), Positives = 426/687 (62%), Gaps = 51/687 (7%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S D +R FL F+ ++GH+++ S+SLVP DPT+L T AGM QFK FLG R RA
Sbjct: 4 STDEVRNAFLKFFETKGHQIVESSSLVPHNDPTLLFTNAGMNQFKDCFLGLEKRAYTRAT 63
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
T+QRC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI +AWEF T LP
Sbjct: 64 TAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIAFAWEFLTETLQLPK 123
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG--------ADDNFWNSGATGPCGPCSE 215
+RL +++YE DDEAF+IWN++VG+P + I R+G DNFW G TGPCGPC+E
Sbjct: 124 DRLLVTIYETDDEAFDIWNQKVGIPADRIIRIGDKKGGKPFESDNFWQMGDTGPCGPCTE 183
Query: 216 IYYDFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLER 272
I+YD H D G D RFIE +N VFMQ+N++ DG++EPL + ++DTG+G+ER
Sbjct: 184 IFYD-HGDHIWGGRPGTPEEDGDRFIEIWNNVFMQFNRQADGTMEPLPKPSVDTGMGIER 242
Query: 273 IARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDG 332
I+ I+Q V +NYE D+ +IK +EL D +N +L++I DH+R+ +L+ DG
Sbjct: 243 ISAIMQGVHSNYEIDVFQALIKATAELIGCE-----DLSNQSLRVIADHIRSCSFLIVDG 297
Query: 333 VFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVK 392
V PSN GRGYV+RR+IRRAVR G +G +G L G + EL
Sbjct: 298 VMPSNEGRGYVLRRIIRRAVRHGNKIGAQGVFFHKLVGVLAGIMGTAGEELK-------- 349
Query: 393 AREQRILEELKR-EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDT 451
R+Q ++E++ R EE F +TLERG +L++ L D L G V L G+ F LYDT
Sbjct: 350 -RQQALVEKVLRIEEENFGRTLERGMTILNEAL-DNL-----DGKV--LDGETVFKLYDT 400
Query: 452 FGFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTE 511
+GFP ++T +VA E ++D +GF+ ME QR Q A A + D +A + + +T+
Sbjct: 401 YGFPADLTNDVAREREFAIDEEGFEKAMEEQR---QRAREAGQFGTDYNAVIKTDV-ETD 456
Query: 512 FLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQG 571
F GY ++++ +L V G V +S G ++L TPFYAESGGQ GD G L G
Sbjct: 457 FSGYTGTEGESVIAALFVEGNEVESLSAGDKAIIVLEATPFYAESGGQSGDAGVLKTDSG 516
Query: 572 TNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLL 631
+ V+D +K LG+ H G + EGV G + AIVD R ++H+ATHLL
Sbjct: 517 ------LFTVEDTQK-LGNAIAHHGVLAEGVFAKGDKAHAIVDAARRTAITLNHSATHLL 569
Query: 632 QAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKV 691
AAL+KV+G+ +Q GSLV D LRFDF+ + EL+E+ER++N + + ++T V
Sbjct: 570 HAALRKVLGEHVTQKGSLVKADNLRFDFSHLEGVTAAELKEVERIVNAQVRRNHDIETNV 629
Query: 692 MALDDAKRAGAIAMFGEKYGEQVKISS 718
M ++ AK GA+A+FGEKY ++V++ S
Sbjct: 630 MDIESAKEKGAMALFGEKYDDEVRVLS 656
>gi|383316061|ref|YP_005376903.1| alanine--tRNA ligase [Frateuria aurantia DSM 6220]
gi|379043165|gb|AFC85221.1| alanine--tRNA ligase [Frateuria aurantia DSM 6220]
Length = 891
Score = 554 bits (1427), Expect = e-155, Method: Compositional matrix adjust.
Identities = 314/683 (45%), Positives = 435/683 (63%), Gaps = 51/683 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR FL+F+ + H ++PS+SLVP DPT+L T +GM+QFK +FLG R A QR
Sbjct: 15 IRSAFLEFFREKQHSIVPSSSLVPASDPTLLFTNSGMVQFKNVFLGSEKPAHVRVADVQR 74
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
C+R ND++ VG T+RHHTFFEMLGN+SFGDYFKKEAI WAWE T FGLPA RL
Sbjct: 75 CLRAGGKHNDLDAVGYTARHHTFFEMLGNWSFGDYFKKEAIHWAWELLTRVFGLPAERLT 134
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYYDF 220
++VY DDEA+ IW+ +VGVP E I R+G A DNFW TGPCGPC+EI+YD
Sbjct: 135 VTVYHTDDEAYAIWHDQVGVPAERIIRIGDNKGAPYASDNFWQMADTGPCGPCTEIFYDH 194
Query: 221 HPDRGCSDVDLG----DDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARI 276
G + G D RFIE +NLVFMQ+++ DGSL PL +DTG+GLER+A +
Sbjct: 195 --GEGIAGGPPGSPDEDGDRFIEIWNLVFMQFDRAPDGSLAPLPAPCVDTGMGLERLAAV 252
Query: 277 LQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPS 336
LQ V +NYE DL +I+ A EL + D N +L++I DH+RA +L+ DGV PS
Sbjct: 253 LQHVHSNYEIDLFAHLIRVAGELTGTA-----DLGNKSLRVIADHIRACSFLVIDGVLPS 307
Query: 337 NIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQ 396
N GRGYV+RR+IRRA+R G +LG++GD + + + E EL A+ Q
Sbjct: 308 NEGRGYVLRRIIRRALRHGWMLGVRGDFFWQMVSPLVAEMGEAYPEL---------AQRQ 358
Query: 397 RILEE-LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
+EE L+ EE RF +TLE G ++ D++ A SG R++G+DAF LYDT+GFP
Sbjct: 359 SFVEEVLRNEEQRFGETLEHGMRVFDELAGKA------SG---RIAGEDAFRLYDTYGFP 409
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGY 515
V++T ++A E G+ VDM GF+ M+ QR +++A+ + + A+LA ++ T+F+GY
Sbjct: 410 VDLTADIARERGLDVDMAGFEQAMQQQRERARAS-SRFESRGQMPAELASQLAATDFMGY 468
Query: 516 DTLSA-KAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQ 574
TL +A V ++ +G + +++ G + V+L+RTPFYAESGGQ GD G L+ +G
Sbjct: 469 QTLVVEQATVIGMVRDGVQLNELADGEEAWVILDRTPFYAESGGQSGDQGELHGVEG--- 525
Query: 575 QTAVVEVKDVKKSLGSVFVHKGTIR-EGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQA 633
V+ V D K G F H G + L VG +VEA VD R ++H+ATHLL +
Sbjct: 526 ---VLAVSDTSKLGGVFFAHVGRWKGRAALRVGSQVEARVDGTRRAAIALNHSATHLLHS 582
Query: 634 ALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMA 693
AL++V+G+ +Q GSLVA RLRFDF+ RP+ E+E+IE L+N I ++T+ M+
Sbjct: 583 ALRQVLGEHVAQKGSLVAAGRLRFDFSHLRPVNREEIEQIENLVNAEIRHNEAVETRHMS 642
Query: 694 LDDAKRAGAIAMFGEKYGEQVKI 716
DDA AGA+A+FGEKYG++V++
Sbjct: 643 YDDAIEAGAMALFGEKYGDEVRV 665
>gi|345848748|ref|ZP_08801767.1| alanyl-tRNA synthetase [Streptomyces zinciresistens K42]
gi|345639833|gb|EGX61321.1| alanyl-tRNA synthetase [Streptomyces zinciresistens K42]
Length = 890
Score = 553 bits (1426), Expect = e-155, Method: Compositional matrix adjust.
Identities = 299/678 (44%), Positives = 424/678 (62%), Gaps = 33/678 (4%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQRC 112
IR+R+L F+ RGH V+PSASL+ +DPT+LL AGM+ FKP FLG+V RA + Q+C
Sbjct: 6 IRRRWLSFFEERGHTVVPSASLIADDPTLLLVPAGMVPFKPYFLGEVKPPFDRATSVQKC 65
Query: 113 IRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE-----FGLPANRLW 167
+RT D+E VG+T+RH TFF+M GNFSFGDYFK+ AI +AWE T +GL +LW
Sbjct: 66 VRTPDIEEVGKTTRHGTFFQMCGNFSFGDYFKEGAITYAWELLTSPQDKGGYGLEPEKLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCS 227
I+VY+DDDEA IW++ VGVP E I+R+G DN+W+ G GPCGPCSEI YD P+ G
Sbjct: 126 ITVYQDDDEAERIWHEVVGVPKERIQRLGMKDNYWSMGVPGPCGPCSEINYDRGPEFGAE 185
Query: 228 DVDLGDDTRFIEFYNLVFMQYNK-----KDDGS-LEPLKQKNIDTGLGLERIARILQKVP 281
+D R++E +NLVFMQY + KD+ L L KNIDTGLGLER+A ILQ V
Sbjct: 186 GGPAVNDERYVEIWNLVFMQYERGEGVGKDNFEILGELPSKNIDTGLGLERLAMILQGVQ 245
Query: 282 NNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRG 341
N YE D +I+KA+EL V+Y ++D ++++L+++ DH+R V L+ DGV P N GRG
Sbjct: 246 NMYEIDTSMAVIEKATELTGVAYGDAHD-SDVSLRVVTDHMRTSVMLIGDGVSPGNEGRG 304
Query: 342 YVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEE 401
YV+RR++RRA+R RLLG G +L + + + EL T +RI +
Sbjct: 305 YVLRRIMRRAIRNMRLLGATGPVVLDLIDTVIGMMGRQYPELVTD--------RERIEKV 356
Query: 402 LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKE 461
EE F++TL+ G +LD A+ T+ +G L+G AFLL+DT+GFP+++T E
Sbjct: 357 AVAEENAFLKTLKAGTTILDA----AVGETKAAGGTV-LAGDKAFLLHDTWGFPIDLTLE 411
Query: 462 VAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSA---DLAEKIPDTEFLGYDTL 518
+A E G+SVD GF M+ QR +++A A K + ++A+K+ +T+F GY
Sbjct: 412 MASEQGLSVDEDGFRRLMKEQRERAKADAQAKKTGHAGAGAYREIADKVGETDFTGYTDT 471
Query: 519 SAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAV 578
+ V +LV+G S+G +VE++L+RTPFYAE GGQIGD G + V G AV
Sbjct: 472 QGECTVVGILVDGVSSPAASEGDEVEIVLDRTPFYAEGGGQIGDTGRIKVDTG-----AV 526
Query: 579 VEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKV 638
+EV+D +K + V+VHKG ++ G + VG A +D + R H+ATHL AL+
Sbjct: 527 IEVRDCQKPVPGVYVHKGVVQVGEVTVGASAHASIDSRRRTAIARAHSATHLTHQALRDA 586
Query: 639 IGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAK 698
+G +QAGS R RFDF + + ++E+ IN + +Q +VM ++DA+
Sbjct: 587 LGPTAAQAGSENQPGRFRFDFGSPSAVPTAVMTDVEQKINEVLARDLDVQAEVMGIEDAR 646
Query: 699 RAGAIAMFGEKYGEQVKI 716
+ GAIA FGEKYGE+V++
Sbjct: 647 KQGAIAEFGEKYGERVRV 664
>gi|421875421|ref|ZP_16307013.1| alanyl-tRNA synthetase [Brevibacillus laterosporus GI-9]
gi|372455629|emb|CCF16562.1| alanyl-tRNA synthetase [Brevibacillus laterosporus GI-9]
Length = 883
Score = 553 bits (1426), Expect = e-155, Method: Compositional matrix adjust.
Identities = 303/676 (44%), Positives = 435/676 (64%), Gaps = 31/676 (4%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
+G+ +R+ +LDF+ S+GH++ PSASLVP +DP++L +G+ K F G++ + PR
Sbjct: 5 TGNQVRQMYLDFFVSKGHRIEPSASLVPVDDPSLLWINSGVATLKKYFDGRIIPENPRIT 64
Query: 108 TSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
+Q+ IRTND+ENVGRT+RHHTFFEMLGNFS GDYFK E+I WAWEF T G +
Sbjct: 65 NAQKSIRTNDIENVGRTARHHTFFEMLGNFSIGDYFKVESIHWAWEFLTSPEWIGFDPEK 124
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRG 225
L ++++ +DDEAFEIWNKE+G+P E I R+ + NFW+ G GP GP +EI+YD G
Sbjct: 125 LSVTIHPEDDEAFEIWNKEIGIPEERIIRL--EGNFWDIGE-GPSGPNTEIFYDRGEAFG 181
Query: 226 C--SDVDL---GDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKV 280
SD +L G++ R++E +NLVF Q+N DG+ PL +KNIDTG+GLER+ I+Q V
Sbjct: 182 NDPSDPELYPGGENERYLEVWNLVFSQFNHNPDGTYTPLPKKNIDTGMGLERMVSIIQNV 241
Query: 281 PNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGR 340
NNYETDL+FP+I++ S+++ V+Y ++ND ++ LK+I DH+R + + + DG PSN GR
Sbjct: 242 DNNYETDLLFPLIEQTSQISGVAY-KTNDELDIALKVIADHVRTVTFAIGDGALPSNEGR 300
Query: 341 GYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILE 400
GYV+RRL+RRAVR G++LGI + FL ++ + ++ +V + I
Sbjct: 301 GYVLRRLLRRAVRMGKMLGI--------QKPFLYTLTKTVGDMMGEFYPEVVQKRDFIER 352
Query: 401 ELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITK 460
++ EE RF +TLE G +L+ M+ + T+ SG +LSGQD F LYDT+GFPV++T+
Sbjct: 353 VIRAEEERFHETLEEGLSILEGMV----TATKASGG-NQLSGQDTFKLYDTYGFPVDLTE 407
Query: 461 EVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTLSA 520
+ A EHG+SVD GF+ ME QR +++AA V L+E +EF+GY TLS
Sbjct: 408 DFAMEHGLSVDRDGFEQAMEEQRERARAARQDVDSMQTQGGALSELTVASEFIGYTTLST 467
Query: 521 KAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVE 580
A VE+++++ + V + +G +++L+RTPFYAESGGQI D G L T
Sbjct: 468 DAKVEAIIIDNQLVKEAQEGVTCQMVLDRTPFYAESGGQINDEGTL------TADTVKAR 521
Query: 581 VKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIG 640
V DV+K VH+ I G L VG ++ A VD + R +HTATHLL ALK V+G
Sbjct: 522 VIDVQKGPHGQNVHQVLIEAGTLHVGDQIAAEVDQQGRNATIKNHTATHLLHQALKDVLG 581
Query: 641 QETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRA 700
+QAGSLV+ +RLRFDF + ELE IE+++N I + M + +AK
Sbjct: 582 THVNQAGSLVSPERLRFDFTHISSITAEELERIEQIVNEQIWSNLAVSISNMKIAEAKEL 641
Query: 701 GAIAMFGEKYGEQVKI 716
GA+A+FGEKYG+ V++
Sbjct: 642 GAMALFGEKYGDIVRV 657
>gi|172060378|ref|YP_001808030.1| alanyl-tRNA synthetase [Burkholderia ambifaria MC40-6]
gi|205829999|sp|B1YNJ6.1|SYA_BURA4 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|171992895|gb|ACB63814.1| alanyl-tRNA synthetase [Burkholderia ambifaria MC40-6]
Length = 874
Score = 553 bits (1426), Expect = e-155, Method: Compositional matrix adjust.
Identities = 300/679 (44%), Positives = 425/679 (62%), Gaps = 44/679 (6%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR++FL F+ S+GH ++ S+SLVP DPT++ T +GM+QFK +FLG PR RA T+QR
Sbjct: 6 IREKFLKFFESKGHTIVRSSSLVPGNDPTLMFTNSGMVQFKDVFLGTDPRPYSRATTAQR 65
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AI++AWE T + LP +LW
Sbjct: 66 SVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIRFAWELLTTVYQLPKEKLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYYDF 220
++VY++DDEA++IW KEVGVP E I R+G A DNFW G TGPCGPC+EI+YD
Sbjct: 126 VTVYQEDDEAYDIWAKEVGVPTERIIRIGDNKGARYASDNFWTMGDTGPCGPCTEIFYDH 185
Query: 221 HPD--RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQ 278
P+ G D R+IE +NLVFMQ+N+ G++ L ++++DTG+GLER+A +LQ
Sbjct: 186 GPEVWGGPPGSPEEDGDRYIEIWNLVFMQFNRDAQGNMTRLPKQSVDTGMGLERLAAVLQ 245
Query: 279 KVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNI 338
V +NYE DL +IK A+ + +S D TN +LK+I DH+RA +L+ DGV P N
Sbjct: 246 HVHSNYEIDLFQNLIKAAARVTEIS-----DLTNNSLKVIADHIRACSFLIVDGVIPGNE 300
Query: 339 GRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRI 398
GRGYV+RR++RRA+R G LG KG F +A+ E+ ++K EQR+
Sbjct: 301 GRGYVLRRIVRRAIRHGYKLGRKGS-------FFHKLVADLVAEMGAAY-PELKEAEQRV 352
Query: 399 LEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEI 458
+ L++EE RF +T+E G +L+ LAD ++ G V L G+ AF L+DT+GFP+++
Sbjct: 353 TDVLRQEEERFFETIEHGMSILEAALADVEAK---GGKV--LDGELAFKLHDTYGFPLDL 407
Query: 459 TKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTL 518
T +V E G++VD FD M QR Q++AA + L T F GY+ +
Sbjct: 408 TADVCRERGMTVDEPAFDDAMARQREQARAAGK-----FKATQGLEYTGAKTTFHGYEEI 462
Query: 519 S-AKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTA 577
+ A V +L V+G V +V G D V+L+ TPFYAESGGQ+GD G L N T
Sbjct: 463 AFDDAKVVALYVDGSAVNEVKAGQDAVVVLDHTPFYAESGGQVGDQGVL-----ANAATR 517
Query: 578 VVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKK 637
V D K V H GT+ +G L++G + A +D R R + +H+ATHL+ AL++
Sbjct: 518 FA-VADTLKVQADVVGHHGTLEQGTLKLGDVLRAEIDAHRRARTQRNHSATHLMHKALRE 576
Query: 638 VIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDA 697
V+G Q GSLV ++ RFDF + P+ D E+ +E+++N I +VM D+A
Sbjct: 577 VLGAHVQQKGSLVDAEKTRFDFAHNAPMTDDEIRRVEQIVNNEILANAPGIVRVMPYDEA 636
Query: 698 KRAGAIAMFGEKYGEQVKI 716
+ GA+A+FGEKYG++V++
Sbjct: 637 VKGGAMALFGEKYGDEVRV 655
>gi|33597425|ref|NP_885068.1| alanyl-tRNA synthetase [Bordetella parapertussis 12822]
gi|41018188|sp|Q7W6N4.1|SYA_BORPA RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|33573852|emb|CAE38162.1| alanyl-tRNA synthetase [Bordetella parapertussis]
Length = 874
Score = 553 bits (1426), Expect = e-155, Method: Compositional matrix adjust.
Identities = 308/679 (45%), Positives = 417/679 (61%), Gaps = 46/679 (6%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR++FL F+ S+GH ++PS+SLVP DPT+L T +GM+QFK +F GK R RA +SQR
Sbjct: 6 IRQKFLQFFQSKGHTIVPSSSLVPANDPTLLFTNSGMVQFKDVFTGKEARAYKRATSSQR 65
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK+EAIQ+AWE T + LPA +LW
Sbjct: 66 SVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKREAIQYAWELLTQVYRLPAEKLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYYDF 220
++VY++DDEA++IW KEVGVP E I R+G A DNFW TGPCGPCSEI+YD
Sbjct: 126 VTVYQEDDEAYDIWAKEVGVPAERIIRIGDNKGARYASDNFWQMADTGPCGPCSEIFYDH 185
Query: 221 HPD-RGCSDVDLGDD-TRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQ 278
P+ G L +D R+IE +NLVFMQ+ + G++E L + +DTG+GLERIA +LQ
Sbjct: 186 GPEIWGGPPGSLEEDGDRYIEIWNLVFMQFERDAAGNMERLPKPCVDTGMGLERIAAVLQ 245
Query: 279 KVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNI 338
V +NYE DL +I A+ V D + +LK+I DH+RA +L+ DG+ PSN
Sbjct: 246 HVHSNYEIDLFQKLIAAAARETGV-----KDLADNSLKVIADHIRACAFLIVDGIIPSNE 300
Query: 339 GRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRI 398
GRGYV+RR++RRA+R G LG L + + E EL+ +R+
Sbjct: 301 GRGYVLRRIVRRALRHGYKLGQTKPFFHRLVPDLVAEMGEAYPELAQ--------VAERV 352
Query: 399 LEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEI 458
+ L++EE RF +TLE G K+LD LA + + P L G F LYDT+GFPV++
Sbjct: 353 AQVLRQEEKRFGETLEHGMKILDGALA------KVAKGDP-LDGTTLFTLYDTYGFPVDL 405
Query: 459 TKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTL 518
T ++ E GV VDM GF+ M+ QR Q++AA K++ S + AE T F GY++L
Sbjct: 406 TADICRERGVEVDMAGFEAAMQRQREQARAA-GKFKMAEGLSYEGAE----TRFEGYESL 460
Query: 519 SAKAI-VESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTA 577
+ V +L V G V +VS G D V+L+ TPFYAESGGQ+GD G L
Sbjct: 461 ELSGVKVTALYVEGTQVEQVSAGQDAVVVLDATPFYAESGGQVGDTGLL------EAGGV 514
Query: 578 VVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKK 637
V D K VF H GT+ G L+VG + A VD R R +H+ATHL+ AL++
Sbjct: 515 RFAVADTLKIQPGVFGHHGTLEAGALKVGDTLLARVDAVRRARTVRNHSATHLMHKALRE 574
Query: 638 VIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDA 697
V+G Q GSLV D+ RFDF P+ ++ +E ++N + + KVMA DDA
Sbjct: 575 VLGAHVQQRGSLVDPDKTRFDFAHDAPMTAEQIARVEAIVNAEVLANQATEAKVMAYDDA 634
Query: 698 KRAGAIAMFGEKYGEQVKI 716
+ GA+A+FGEKYG+ V++
Sbjct: 635 VKGGAMALFGEKYGDTVRV 653
>gi|429143632|gb|AFZ77084.1| alanyl-tRNA synthetase [Gilliamella apicola]
Length = 877
Score = 553 bits (1426), Expect = e-155, Method: Compositional matrix adjust.
Identities = 316/686 (46%), Positives = 436/686 (63%), Gaps = 60/686 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ +GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 7 IRQNFLDFFRGKGHEVVASSSLVPHNDPTLLFTNAGMNQFKDLFLGVDKRSYTRATTSQR 66
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND++NVG T+RHHTFFEMLGNFSFGDYFK +AI +AWE T + F LP +
Sbjct: 67 CVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKHDAIHFAWELLTSKEWFNLPKEK 126
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
L ++VYE DDEA+ IW KE+G+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 127 LTVTVYETDDEAYAIWEKEIGIPKERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 186
Query: 219 DFHPDR------GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLER 272
D H D G ++ D GD RFIE +N+VFMQ+N+ DG++EPL + ++DTG+GLER
Sbjct: 187 D-HGDHIWGGPPGSAEED-GD--RFIEIWNIVFMQFNRHPDGTMEPLPKPSVDTGMGLER 242
Query: 273 IARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDG 332
IA +LQ V +NYE DL +I A ANV Q+ D N +L++I DH+R+ +L+SDG
Sbjct: 243 IAAVLQHVNSNYEIDLFKKLINDA---ANV--IQTKDLENKSLRVIADHIRSCAFLISDG 297
Query: 333 VFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVK 392
V PSN GRGYV+RR+IRRAVR G +LG K L + + A+EL
Sbjct: 298 VLPSNEGRGYVLRRIIRRAVRHGHMLGAKDIFFYKLVKPLIGVMGSAAVELE-------- 349
Query: 393 AREQRILEE-LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDT 451
+ ++++E LK EE +F++TLERG LLDQ L T+ +G V L G AF LYDT
Sbjct: 350 -KNRKLVENALKIEEEQFLKTLERGLSLLDQEL------TKITGKV--LPGDIAFKLYDT 400
Query: 452 FGFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPD-T 510
+GFP+++T +V E +++D GF+ ME QR++ A + +VD S + K+ D T
Sbjct: 401 YGFPLDLTADVCREKNITIDEDGFNQCMEEQRKR---ARESSSFNVDYSNVI--KLDDKT 455
Query: 511 EFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQ 570
EFLGY + V ++ NG+ V + G + V+L++TPFY ESGGQIGD G L
Sbjct: 456 EFLGYQATESSGKVIAIFKNGQKVENIHAGDEAIVVLDKTPFYGESGGQIGDKGLL---T 512
Query: 571 GTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHL 630
N + V + + +S+G H G I +G L+VG V A +D +LR+R + +H+ATHL
Sbjct: 513 AANLEFNVFDSQKYGQSIG----HLGQIIKGSLKVGDNVTAAIDVELRERIRRNHSATHL 568
Query: 631 LQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTK 690
LQAAL++++G Q GSLV LRFDF+ ++ + ++ EIE L+N I + +
Sbjct: 569 LQAALQRILGNHVHQKGSLVNDSYLRFDFSHNQAITPEQIIEIENLVNQQIRRNLPVDIE 628
Query: 691 VMALDDAKRAGAIAMFGEKYGEQVKI 716
+M +D AK GA+A+FGEKY + V++
Sbjct: 629 LMPIDKAKDKGAMALFGEKYEDIVRV 654
>gi|189426203|ref|YP_001953380.1| alanyl-tRNA synthetase [Geobacter lovleyi SZ]
gi|189422462|gb|ACD96860.1| alanyl-tRNA synthetase [Geobacter lovleyi SZ]
Length = 876
Score = 553 bits (1426), Expect = e-155, Method: Compositional matrix adjust.
Identities = 288/679 (42%), Positives = 421/679 (62%), Gaps = 32/679 (4%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
+G+ IR RFL ++ RGH V+ S+ L+P+ DPT++ T AGM QFK FLG R RAA
Sbjct: 2 TGNEIRARFLKYFEDRGHVVVSSSGLIPQNDPTLMFTNAGMNQFKDCFLGMEDRGYYRAA 61
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
+SQ+C+R ND+ENVGRT+RHHTFFEMLGNFSFGDYFKKEAI +AWEF T + GL
Sbjct: 62 SSQKCVRAGGKHNDLENVGRTARHHTFFEMLGNFSFGDYFKKEAIAFAWEFLTKDLGLDT 121
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPD 223
+RL+++VY DDDEA +IW+++ GVP E I R G DNFW+ G TGPCGPC+EI++D P+
Sbjct: 122 SRLYVTVYTDDDEAADIWHQQEGVPRERIYRFGEKDNFWSMGDTGPCGPCTEIFWDNGPE 181
Query: 224 RGCSDVDLG---DDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKV 280
GC D D R++E +N VFMQ+N+ DG L PL + +DTG+GLERI ++Q V
Sbjct: 182 VGCGSPDCAVGCDCDRYMEIWNNVFMQFNRTADGVLHPLPKPAVDTGMGLERITTVMQGV 241
Query: 281 PNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGR 340
+NY+TDL+ II+ + Y N++ ++++++I DH RA+ +L+ DG PSN GR
Sbjct: 242 RSNYDTDLLQGIIRHIERHSGKKYG-DNEKDSVSMRVIADHCRAVTFLICDGALPSNEGR 300
Query: 341 GYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILE 400
GYV+RR++RRA R ++LG+ L + + E+ ++ RE I +
Sbjct: 301 GYVLRRIMRRAARHAKMLGVA--------EPLLCRMVDAVREMMGDAYPELAERETYIRK 352
Query: 401 ELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITK 460
+ EE RF +TL+RG +L++ +A + +G + G+ F LYDTFGFPV++T+
Sbjct: 353 VVLAEEERFNETLDRGLAILNEEVA-----SLRAGGCSVIPGETLFKLYDTFGFPVDLTE 407
Query: 461 EVAEEHGVSVDMKGFDIEMENQR---RQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDT 517
++ G SVD GF+ ME+QR R+ A ++ D +L T F+GY +
Sbjct: 408 DIVRAEGFSVDEPGFEACMEHQRELGREHWKGSGAAGIA-DVYKELHNHGLRTNFVGYGS 466
Query: 518 LSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTA 577
L+A + V +LL +GK V + G ++++ + +PFY ESGGQ GD G + + +A
Sbjct: 467 LTAFSPVTALLRDGKKVQSATAGDKIDLICDTSPFYGESGGQAGDTGCI------SSGSA 520
Query: 578 VVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKK 637
+EV + + VH ++EG ++ G V V R+ +H+ATHLLQAAL++
Sbjct: 521 RLEVLATSRPFTDLVVHHALVKEGAIKTGDAVNLTVAIDKRRATARNHSATHLLQAALRQ 580
Query: 638 VIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDA 697
V+G+ QAGSLV +RLRFDF + EL+++E L+NGWI D L + M + +A
Sbjct: 581 VLGEHIKQAGSLVEPNRLRFDFTHFTGVTPEELQQVEDLVNGWIMDNAELNIREMGMQEA 640
Query: 698 KRAGAIAMFGEKYGEQVKI 716
+GA A+F EKYG V++
Sbjct: 641 VESGATALFDEKYGSTVRV 659
>gi|344339101|ref|ZP_08770031.1| alanyl-tRNA synthetase [Thiocapsa marina 5811]
gi|343801021|gb|EGV18965.1| alanyl-tRNA synthetase [Thiocapsa marina 5811]
Length = 866
Score = 553 bits (1426), Expect = e-154, Method: Compositional matrix adjust.
Identities = 296/674 (43%), Positives = 420/674 (62%), Gaps = 44/674 (6%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
+R FLD++A R H+ +PS+ LVP DPT+L T AGM+QFK +FLG+ R RA +SQR
Sbjct: 7 LRASFLDYFAQRDHERVPSSPLVPANDPTLLFTNAGMVQFKEVFLGRERRAYNRAVSSQR 66
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK+EAI +AW++ T LP RLW
Sbjct: 67 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKREAIAFAWDYLTRVLALPPERLW 126
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCS 227
I+VY +DDEA +IW KE+G R GA DNFW+ G TGPCGPCSEI+YD P+
Sbjct: 127 ITVYTEDDEAADIWLKEIGADASRFSRCGAKDNFWSMGETGPCGPCSEIFYDHGPEIPGG 186
Query: 228 DVDLGDD--TRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYE 285
D+ R++E +NLVFMQYN+ +G+L PL + ++DTG+GLER+A ++Q V +NYE
Sbjct: 187 PPGSPDEDGDRYVEIWNLVFMQYNRDAEGNLTPLPRPSVDTGMGLERLAAVMQGVHSNYE 246
Query: 286 TDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVR 345
DL +I A+ + DR N +L++I DH+R+ +L++DGV P N GRGYV+R
Sbjct: 247 IDLFVRLIDAAARATGCA-----DRENKSLRVIADHIRSAAFLITDGVTPGNEGRGYVLR 301
Query: 346 RLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKRE 405
R++RRA+R G LG L A + + EL A + + + E
Sbjct: 302 RIMRRAIRHGYQLGCTTPFFHRLVPALVAEMGAAYPELV--------ASHEHVERIILLE 353
Query: 406 ELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEE 465
E RF +TLE G +LLD+ +A L T R+ G+ F LYDT+GFP ++T ++A E
Sbjct: 354 EERFAETLEHGMRLLDEAIA-GLGDT-------RIPGETVFKLYDTYGFPTDLTADIARE 405
Query: 466 HGVSVDMKGFDIEMENQRRQSQAAHN---AVKLSVDDSADLAEKIPDTEFLGYDTLSAKA 522
G+++DM GF+ M QR +++AA L +D +TEF GY+ L +
Sbjct: 406 RGLALDMDGFEQAMAQQRERARAASQFGGPAGLEIDVKG-------ETEFCGYERLHEEV 458
Query: 523 IVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVK 582
V +L +++ G + V+L+ TPFYAESGGQ+GD G+L G EV
Sbjct: 459 TVVALYSARGSCDQLAAGEEGLVVLDLTPFYAESGGQVGDRGWLLGEGGR------FEVL 512
Query: 583 DVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQE 642
D +K H G + EG+L VG VEA VD R+ ++H+ATHLL AAL++V+G+
Sbjct: 513 DTQKKGEGAVGHLGRVAEGILAVGDRVEARVDGSRRRATALNHSATHLLHAALRRVLGEH 572
Query: 643 TSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGA 702
Q GSLV +RLRFDF+ + + ++ EIER++N + + +L++T++M+LDDAK +GA
Sbjct: 573 VQQKGSLVGPERLRFDFSHYEAVSREQVLEIERMVNREVRENHLVETRIMSLDDAKASGA 632
Query: 703 IAMFGEKYGEQVKI 716
+A+FGEKY +QV++
Sbjct: 633 MALFGEKYSDQVRV 646
>gi|418473883|ref|ZP_13043426.1| alanyl-tRNA synthetase [Streptomyces coelicoflavus ZG0656]
gi|371545507|gb|EHN74124.1| alanyl-tRNA synthetase [Streptomyces coelicoflavus ZG0656]
Length = 890
Score = 553 bits (1426), Expect = e-154, Method: Compositional matrix adjust.
Identities = 301/680 (44%), Positives = 425/680 (62%), Gaps = 37/680 (5%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQRC 112
IR+R+L F+ RGH V+PSASL+ +DPT+LL AGM+ FKP FLG+V RA + Q+C
Sbjct: 6 IRRRWLSFFEERGHTVVPSASLIADDPTLLLVPAGMVPFKPYFLGEVKPPFDRATSVQKC 65
Query: 113 IRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE-----FGLPANRLW 167
+RT D+E VG+T+RH TFF+M GNFSFGDYFK+ AI++AWE T +GL RLW
Sbjct: 66 VRTPDIEEVGKTTRHGTFFQMCGNFSFGDYFKEGAIKYAWELLTSPQDKGGYGLDPERLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCS 227
I+VY+DDDEA IW+ VGVP E I+R+G DN+W+ G GPCGPCSEI YD P+ G
Sbjct: 126 ITVYKDDDEAERIWHDVVGVPSERIQRLGKKDNYWSMGVPGPCGPCSEINYDRGPEFGAE 185
Query: 228 DVDLGDDTRFIEFYNLVFMQYNKKDDGSLE------PLKQKNIDTGLGLERIARILQKVP 281
+D R++E +NLVFMQY + + E L KNIDTGLGLER+A ILQ V
Sbjct: 186 GGPAVNDERYVEIWNLVFMQYERGEGTGKEEFEILGELPSKNIDTGLGLERLAMILQGVQ 245
Query: 282 NNYETDLIFPIIKKASELANVSY--AQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIG 339
N YE D +I KA+EL V+Y AQ++D ++L+++ DH+R V L+ DGV P N G
Sbjct: 246 NMYEIDTSMAVINKATELTGVAYGDAQASD---VSLRVVTDHMRTSVMLIGDGVTPGNEG 302
Query: 340 RGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRIL 399
RGYV+RR++RRA+R RLLG G +L + + ++ EL T +RI
Sbjct: 303 RGYVLRRIMRRAIRNMRLLGATGPVVKDLIDVVIGMMGQQYPELVTD--------RERIE 354
Query: 400 EELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEIT 459
+ EE F++TL+ G +LD A+S T+ SG L+G AFLL+DT+GFP+++T
Sbjct: 355 KVALAEENAFLKTLKAGTNILDT----AVSDTKASGGTV-LAGDKAFLLHDTWGFPIDLT 409
Query: 460 KEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSA---DLAEKIPDTEFLGYD 516
E+A E G+SVD GF M+ QR +++A A K + ++A+K T+F+GY
Sbjct: 410 LEMAAEQGLSVDEDGFRRLMKEQRERAKADAQAKKTGHAGAGAYREIADKAGATDFVGYT 469
Query: 517 TLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQT 576
++ V +LV+G ++G +VE++L+RTPFYAE GGQIGD G + V G
Sbjct: 470 DTETESTVVGILVDGASSPAATEGDEVEIVLDRTPFYAEGGGQIGDTGRIRVDTG----- 524
Query: 577 AVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALK 636
AV+EV+D +K + V+VHKG ++ G + VG + +A +D + R+ H+ATHL AL+
Sbjct: 525 AVIEVRDCQKPVPGVYVHKGVVQVGEVTVGAKAQASIDDRRRKAIARAHSATHLTHQALR 584
Query: 637 KVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDD 696
+G +QAGS R RFDF + + ++E+ IN + ++ VM +D+
Sbjct: 585 DALGPTAAQAGSENQPGRFRFDFGSPSAVPTAVMTDVEQKINEVLARDLDVRADVMGIDE 644
Query: 697 AKRAGAIAMFGEKYGEQVKI 716
AK+ GAIA FGEKYGE+V++
Sbjct: 645 AKKQGAIAEFGEKYGERVRV 664
>gi|33602167|ref|NP_889727.1| alanyl-tRNA synthetase [Bordetella bronchiseptica RB50]
gi|410473494|ref|YP_006896775.1| alanyl-tRNA synthetase [Bordetella parapertussis Bpp5]
gi|427814208|ref|ZP_18981272.1| alanyl-tRNA synthetase [Bordetella bronchiseptica 1289]
gi|41018190|sp|Q7WHL6.1|SYA_BORBR RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|33576605|emb|CAE33683.1| alanyl-tRNA synthetase [Bordetella bronchiseptica RB50]
gi|408443604|emb|CCJ50276.1| alanyl-tRNA synthetase [Bordetella parapertussis Bpp5]
gi|410565208|emb|CCN22761.1| alanyl-tRNA synthetase [Bordetella bronchiseptica 1289]
Length = 874
Score = 553 bits (1426), Expect = e-154, Method: Compositional matrix adjust.
Identities = 307/679 (45%), Positives = 415/679 (61%), Gaps = 46/679 (6%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR++FL F+ S+GH ++PS+SLVP DPT+L T +GM+QFK +F GK R RA +SQR
Sbjct: 6 IRQKFLQFFQSKGHTIVPSSSLVPANDPTLLFTNSGMVQFKDVFTGKEARAYKRATSSQR 65
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK+EAIQ+AWE T + LPA +LW
Sbjct: 66 SVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKREAIQYAWELLTQVYRLPAEKLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYYDF 220
++VY++DDEA++IW KEVGVP E I R+G A DNFW TGPCGPCSEI+YD
Sbjct: 126 VTVYQEDDEAYDIWAKEVGVPAERIIRIGDNKGARYASDNFWQMADTGPCGPCSEIFYDH 185
Query: 221 HPD--RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQ 278
P+ G D R+IE +NLVFMQ+ + G++E L + +DTG+GLERIA +LQ
Sbjct: 186 GPEIWGGPPGSPEEDGDRYIEIWNLVFMQFERDAAGNMERLPKPCVDTGMGLERIAAVLQ 245
Query: 279 KVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNI 338
V +NYE DL +I A+ V D + +LK+I DH+RA +L+ DG+ PSN
Sbjct: 246 HVHSNYEIDLFQKLIAAAARETGV-----KDLADNSLKVIADHIRACAFLIVDGIIPSNE 300
Query: 339 GRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRI 398
GRGYV+RR++RRA+R G LG L + + E EL+ +R+
Sbjct: 301 GRGYVLRRIVRRALRHGYKLGQTKPFFHRLVPDLVAEMGEAYPELAQ--------VAERV 352
Query: 399 LEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEI 458
+ L++EE RF +TLE G K+LD LA + + P L G F LYDT+GFPV++
Sbjct: 353 AQVLRQEEERFGETLEHGMKILDGALA------KVAKGDP-LDGTTLFTLYDTYGFPVDL 405
Query: 459 TKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTL 518
T ++ E GV VDM GF+ M+ QR Q++AA K++ S + AE T F GY++L
Sbjct: 406 TADICRERGVEVDMAGFEAAMQRQREQARAA-GKFKMAEGLSYEGAE----TRFEGYESL 460
Query: 519 SAKAI-VESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTA 577
+ V +L V G V +VS G D V+L+ TPFYAESGGQ+GD G L
Sbjct: 461 ELSGVKVTALYVEGTQVEQVSAGQDAVVVLDATPFYAESGGQVGDTGLL------EAGGV 514
Query: 578 VVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKK 637
V D K VF H GT+ G L+VG + A VD R R +H+ATHL+ AL++
Sbjct: 515 RFAVADTLKIQPGVFGHHGTLEAGALKVGDTLLARVDAVRRARTVRNHSATHLMHKALRE 574
Query: 638 VIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDA 697
V+G Q GSLV D+ RFDF P+ ++ +E ++N + + KVMA DDA
Sbjct: 575 VLGAHVQQRGSLVDPDKTRFDFAHDAPMTAEQIARVEAIVNAEVLANQATEAKVMAYDDA 634
Query: 698 KRAGAIAMFGEKYGEQVKI 716
+ GA+A+FGEKYG+ V++
Sbjct: 635 VKGGAMALFGEKYGDTVRV 653
>gi|387902001|ref|YP_006332340.1| alanyl-tRNA synthetase [Burkholderia sp. KJ006]
gi|387576893|gb|AFJ85609.1| Alanyl-tRNA synthetase [Burkholderia sp. KJ006]
Length = 874
Score = 553 bits (1425), Expect = e-154, Method: Compositional matrix adjust.
Identities = 300/679 (44%), Positives = 422/679 (62%), Gaps = 44/679 (6%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR++FL F+ S+GH ++ S+SLVP DPT++ T +GM+QFK +FLG R RA T+QR
Sbjct: 6 IREKFLKFFESKGHTIVRSSSLVPGNDPTLMFTNSGMVQFKDVFLGTDQRPYTRATTAQR 65
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AI++AWE T + LP ++LW
Sbjct: 66 SVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIRFAWELLTTVYQLPKDKLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYYDF 220
++VY++DDEA++IW KEVGVP E I R+G A DNFW G TGPCGPC+EI+YD
Sbjct: 126 VTVYQEDDEAYDIWAKEVGVPAERIIRIGDNKGARYASDNFWTMGDTGPCGPCTEIFYDH 185
Query: 221 HPD--RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQ 278
PD G D R+IE +NLVFMQ+N+ G++ L ++++DTG+GLER+A +LQ
Sbjct: 186 GPDVWGGPPGSPEEDGDRYIEIWNLVFMQFNRDAQGNMTRLPKQSVDTGMGLERLAAVLQ 245
Query: 279 KVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNI 338
V +NYE DL +IK A+ + ++ D N +LK+I DH+RA +L+ DGV P N
Sbjct: 246 HVHSNYEIDLFQNLIKAAARV-----TETADLNNNSLKVIADHIRACSFLIVDGVIPGNE 300
Query: 339 GRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRI 398
GRGYV+RR++RRA+R G LG K GAF + + ++K EQR+
Sbjct: 301 GRGYVLRRIVRRAIRHGYKLGRK--------GAFFHKLVADLVAEMGAAYPELKEAEQRV 352
Query: 399 LEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEI 458
+ L++EE RF +T+E G +L+ LAD ++ G V L G+ AF L+DT+GFP+++
Sbjct: 353 TDVLRQEEERFFETIEHGMSILEAALADVEAK---GGKV--LDGELAFKLHDTYGFPLDL 407
Query: 459 TKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTL 518
T +V E G++VD FD M QR Q++AA + L T F GY+ +
Sbjct: 408 TADVCRERGMTVDEPAFDDAMARQREQARAAGK-----FKATQGLEYTGAKTTFHGYEEI 462
Query: 519 S-AKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTA 577
+ A V +L V G V +V G D V+L+ TPFYAESGGQ+GD G L N T
Sbjct: 463 AFDDAKVVALYVEGSSVGEVKAGQDAVVVLDHTPFYAESGGQVGDQGVL-----ANAATR 517
Query: 578 VVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKK 637
V D K V H GT+ +G L+VG + A +D + R R + +H+ATHL+ AL++
Sbjct: 518 FA-VADTLKVQADVIGHHGTLEQGTLKVGDVLRAEIDAQRRARTQRNHSATHLMHKALRE 576
Query: 638 VIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDA 697
V+G Q GSLV D+ RFDF + PL D E+ +E+++N I +VM D+A
Sbjct: 577 VLGAHVQQKGSLVDADKTRFDFAHNAPLTDDEIRRVEQIVNDEILANAPGIVRVMPYDEA 636
Query: 698 KRAGAIAMFGEKYGEQVKI 716
+ GA+A+FGEKYG++V++
Sbjct: 637 VKGGAMALFGEKYGDEVRV 655
>gi|134295482|ref|YP_001119217.1| alanyl-tRNA synthetase [Burkholderia vietnamiensis G4]
gi|205830008|sp|A4JDM9.1|SYA_BURVG RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|134138639|gb|ABO54382.1| alanyl-tRNA synthetase [Burkholderia vietnamiensis G4]
Length = 874
Score = 553 bits (1425), Expect = e-154, Method: Compositional matrix adjust.
Identities = 300/679 (44%), Positives = 422/679 (62%), Gaps = 44/679 (6%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR++FL F+ S+GH ++ S+SLVP DPT++ T +GM+QFK +FLG R RA T+QR
Sbjct: 6 IREKFLKFFESKGHTIVRSSSLVPGNDPTLMFTNSGMVQFKDVFLGTDQRPYTRATTAQR 65
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AI++AWE T + LP ++LW
Sbjct: 66 SVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIRFAWELLTTVYQLPKDKLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYYDF 220
++VY++DDEA++IW KEVGVP E I R+G A DNFW G TGPCGPC+EI+YD
Sbjct: 126 VTVYQEDDEAYDIWAKEVGVPAERIIRIGDNKGARYASDNFWTMGDTGPCGPCTEIFYDH 185
Query: 221 HPD--RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQ 278
PD G D R+IE +NLVFMQ+N+ G++ L ++++DTG+GLER+A +LQ
Sbjct: 186 GPDVWGGPPGSPEEDGDRYIEIWNLVFMQFNRDAQGNMTRLPKQSVDTGMGLERLAAVLQ 245
Query: 279 KVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNI 338
V +NYE DL +IK A+ + ++ D N +LK+I DH+RA +L+ DGV P N
Sbjct: 246 HVHSNYEIDLFQNLIKAAARV-----TETADLNNNSLKVIADHIRACSFLIVDGVIPGNE 300
Query: 339 GRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRI 398
GRGYV+RR++RRA+R G LG K GAF + + ++K EQR+
Sbjct: 301 GRGYVLRRIVRRAIRHGYKLGRK--------GAFFHKLVADLVAEMGAAYPELKEAEQRV 352
Query: 399 LEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEI 458
+ L++EE RF +T+E G +L+ LAD ++ G V L G+ AF L+DT+GFP+++
Sbjct: 353 TDVLRQEEERFFETIEHGMSILEAALADVEAK---GGKV--LDGELAFKLHDTYGFPLDL 407
Query: 459 TKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTL 518
T +V E G++VD FD M QR Q++AA + L T F GY+ +
Sbjct: 408 TADVCRERGMTVDEPAFDDAMARQREQARAAGK-----FKATQGLEYTGAKTTFHGYEEI 462
Query: 519 S-AKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTA 577
+ A V +L V G V +V G D V+L+ TPFYAESGGQ+GD G L N T
Sbjct: 463 AFDDAKVVALYVEGSSVGEVKAGQDAVVVLDHTPFYAESGGQVGDQGVL-----ANAATR 517
Query: 578 VVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKK 637
V D K V H GT+ +G L+VG + A +D + R R + +H+ATHL+ AL++
Sbjct: 518 FA-VADTLKVQADVIGHHGTLEQGTLKVGDVLRAEIDAQRRARTQRNHSATHLMHKALRE 576
Query: 638 VIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDA 697
V+G Q GSLV D+ RFDF + PL D E+ +E+++N I +VM D+A
Sbjct: 577 VLGAHVQQKGSLVDADKTRFDFAHNAPLTDDEIRRVEQIVNDEILANAPGIVRVMPYDEA 636
Query: 698 KRAGAIAMFGEKYGEQVKI 716
+ GA+A+FGEKYG++V++
Sbjct: 637 VKGGAMALFGEKYGDEVRV 655
>gi|421661641|ref|ZP_16101814.1| alanine--tRNA ligase [Acinetobacter baumannii OIFC110]
gi|408715647|gb|EKL60772.1| alanine--tRNA ligase [Acinetobacter baumannii OIFC110]
Length = 885
Score = 553 bits (1425), Expect = e-154, Method: Compositional matrix adjust.
Identities = 299/682 (43%), Positives = 430/682 (63%), Gaps = 48/682 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FL ++ ++GH + S+SLVP DPT+L T AGM QFK FLG R RA TSQ+
Sbjct: 13 IREAFLRYFETQGHTRVASSSLVPANDPTLLFTNAGMNQFKDCFLGLEKRDYVRATTSQK 72
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND++NVG T+RHHTFFEMLGNFSFGDYFK++A+++AWEF T E LP ++
Sbjct: 73 CVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKRDALKFAWEFLTSEQWLALPKDK 132
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
L+++VY DDEA++IWNKE+G+ E I R+G A DNFW G TGPCGPCSEI++
Sbjct: 133 LYVTVYHTDDEAYDIWNKEIGLAPERIIRIGDNKGEKYASDNFWAMGDTGPCGPCSEIFF 192
Query: 219 DF--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARI 276
D H G D RFIE +N VFMQ+N+ DG L PL ++DTG+GLERI+ +
Sbjct: 193 DHGEHIWGGLPGSPEEDGDRFIEIWNNVFMQFNRTADGVLHPLPAPSVDTGMGLERISAV 252
Query: 277 LQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPS 336
LQ V +NY+ DL ++K A+ + + D +L+++ DH R+ +L++DGV PS
Sbjct: 253 LQHVNSNYDIDLFQHLLKAAANIIGIE-----DEGQPSLRVVADHARSCCFLIADGVNPS 307
Query: 337 NIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQ 396
N GRGYV+RR+IRRAVR G LG G F + + IE+ +++AR +
Sbjct: 308 NEGRGYVLRRIIRRAVRHGNKLGATG--------TFFYKMLQPLIEVMGQAYPELEARRE 359
Query: 397 RILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPV 456
I L REE +F +TLE+G KLL+ LA +T + G F LYDT+GFP
Sbjct: 360 VIEATLIREEEQFAKTLEQGLKLLEGELAQLKDKT--------IPGATVFKLYDTYGFPT 411
Query: 457 EITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYD 516
++T ++A E G +D GF++EM QR Q A +A K +VD + ++ + +T+F GY
Sbjct: 412 DLTADIARERGFIIDEAGFEVEMAAQR---QRARDAGKFAVDYN-NIVKVEGETQFDGYT 467
Query: 517 TLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQT 576
+ + + ++ +G V +VS+G + ++LN+TPFYAESGGQIGD G +T
Sbjct: 468 NTTGQGQIVAIYKDGVQVDEVSEGDEALIVLNQTPFYAESGGQIGDTGIF------KNET 521
Query: 577 AVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALK 636
+ EV+D KKS G FVH+G + G L++ + VEAIV +R+ +H+ATHLL AAL+
Sbjct: 522 GIFEVQDTKKS-GGAFVHQGIVTVGNLKISQNVEAIVKADIREATARNHSATHLLHAALR 580
Query: 637 KVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDD 696
+++G Q GSLVA D LRFDF +P+ +L+++ERL+N I + T+++ ++
Sbjct: 581 QILGSHVQQKGSLVASDILRFDFANDQPVSFEQLQQVERLVNAEIIANTAVTTELLDIET 640
Query: 697 AKRAGAIAMFGEKYGEQVKISS 718
AK GA+ +FGEKYG++V++ S
Sbjct: 641 AKAKGAMMLFGEKYGDEVRVLS 662
>gi|421473160|ref|ZP_15921303.1| alanine--tRNA ligase, partial [Burkholderia multivorans ATCC
BAA-247]
gi|400221622|gb|EJO52059.1| alanine--tRNA ligase, partial [Burkholderia multivorans ATCC
BAA-247]
Length = 863
Score = 553 bits (1425), Expect = e-154, Method: Compositional matrix adjust.
Identities = 301/679 (44%), Positives = 420/679 (61%), Gaps = 44/679 (6%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR++FL F+ S+GH ++ S+SLVP DPT++ T +GM+QFK +FLG R RA T+QR
Sbjct: 6 IREKFLKFFESKGHTIVRSSSLVPGNDPTLMFTNSGMVQFKDVFLGTDRRPYTRATTAQR 65
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AI++AWE T + LP ++LW
Sbjct: 66 SVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIRFAWELLTTVYMLPKDKLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYYDF 220
++VY++DDEA++IW KEVGVP E I R+G A DNFW G TGPCGPC+EI+YD
Sbjct: 126 VTVYQEDDEAYDIWAKEVGVPTERIIRIGDNKGARYASDNFWTMGDTGPCGPCTEIFYDH 185
Query: 221 HPD--RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQ 278
P+ G D R+IE +NLVFMQ+N+ G++ L + +DTG+GLER+A +LQ
Sbjct: 186 GPEVWGGPPGSPEEDGDRYIEIWNLVFMQFNRDAQGNMTRLPKPCVDTGMGLERLAAVLQ 245
Query: 279 KVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNI 338
V +NYE DL +IK A+ + V D N +LK+I DH+RA +L+ DGV P N
Sbjct: 246 HVHSNYEIDLFQNLIKAAARVTEVG-----DLNNNSLKVIADHIRACAFLIVDGVIPGNE 300
Query: 339 GRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRI 398
GRGYV+RR++RRA+R G LG K GAF + + ++K EQR+
Sbjct: 301 GRGYVLRRIVRRAIRHGYKLGRK--------GAFFHKLVADLVAEMGAAYPELKEAEQRV 352
Query: 399 LEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEI 458
+ L++EE RF +T+E G +L+ LAD ++ G V L G+ AF L+DT+GFP+++
Sbjct: 353 TDVLRQEEERFFETIEHGMSILESALADLEAK---GGKV--LDGELAFKLHDTYGFPLDL 407
Query: 459 TKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTL 518
T +V E GV+VD FD M QR Q++AA + L T F GY+ +
Sbjct: 408 TADVCRERGVTVDEPAFDDAMARQREQARAAGK-----FKAAQGLEYTGAKTTFHGYEEI 462
Query: 519 S-AKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTA 577
+ A V +L V+G V +V G D V+L+ TPFYAESGGQ+GD G L N T
Sbjct: 463 AFDDAKVVALYVDGSAVTEVKAGQDAVVVLDHTPFYAESGGQVGDQGVL-----ANASTR 517
Query: 578 VVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKK 637
V D K V H GT+ +G L+VG + A +D + R R + +H+ATHL+ AL++
Sbjct: 518 FA-VADTLKVQADVIGHHGTLEQGTLKVGDVLRAEIDAQRRARTQRNHSATHLMHKALRE 576
Query: 638 VIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDA 697
V+G Q GSLV D+ RFDF + PL D E+ +E+++N I +VM D+A
Sbjct: 577 VLGSHVQQKGSLVDADKTRFDFAHNAPLTDDEIRRVEQIVNDEILANAPGIVRVMPYDEA 636
Query: 698 KRAGAIAMFGEKYGEQVKI 716
+ GA+A+FGEKYG++V++
Sbjct: 637 VKGGAMALFGEKYGDEVRV 655
>gi|335039187|ref|ZP_08532367.1| alanyl-tRNA synthetase [Caldalkalibacillus thermarum TA2.A1]
gi|334180921|gb|EGL83506.1| alanyl-tRNA synthetase [Caldalkalibacillus thermarum TA2.A1]
Length = 880
Score = 553 bits (1425), Expect = e-154, Method: Compositional matrix adjust.
Identities = 309/678 (45%), Positives = 429/678 (63%), Gaps = 31/678 (4%)
Query: 47 PSSGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPR 105
P S IR+ FLDF+ +GH+V PSASL+P +DP++L +G+ K F G+V PR
Sbjct: 3 PLSSAEIREMFLDFFKEKGHRVEPSASLIPHDDPSLLWINSGVATLKKYFDGRVIPDNPR 62
Query: 106 AATSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPA 163
Q+ IRTND+ENVG+T+RHHTFFEMLGNFS GDYFKKEAI WAWEF T GL
Sbjct: 63 IVNCQKSIRTNDIENVGKTARHHTFFEMLGNFSIGDYFKKEAIHWAWEFLTDPRWIGLDP 122
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPD 223
RL ++++ +DDEAFEIW+KE+G+P E I R+ +DNFW+ G GPCGP +EI+YD
Sbjct: 123 KRLSVTIHPEDDEAFEIWHKEIGLPEERIIRL--EDNFWDIG-EGPCGPNTEIFYDRGEA 179
Query: 224 RGCS--DVDL---GDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQ 278
G D +L G++ R++E +NLVF QYN DGS PL +KNIDTG+GLER+A +LQ
Sbjct: 180 YGNDPDDPELYPGGENERYLEIWNLVFSQYNHNPDGSYTPLPKKNIDTGMGLERMASVLQ 239
Query: 279 KVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNI 338
VP N++TDL PII+K ++++ Y + N ++ K+I DH+R + + + DG PSN
Sbjct: 240 DVPTNFDTDLFQPIIQKTAQMSGKPYGE-NKEDDVAFKVIADHVRTVAFAIGDGALPSNE 298
Query: 339 GRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRI 398
GRGYV+RRL+RRAVR G++LGI FL + E+ +V +++ I
Sbjct: 299 GRGYVIRRLLRRAVRYGKVLGINE--------PFLYQLTPVVGEIMGSFYPEVVDKQEFI 350
Query: 399 LEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEI 458
+K EE RF +TL G +L M+ + ++ RLSGQ AF LYDT+GFP+++
Sbjct: 351 ASVVKTEEERFHETLHEGLSILSGMIKELKAKGEN-----RLSGQQAFTLYDTYGFPLDL 405
Query: 459 TKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTL 518
T++ A E G+ VD +GF+ EME QR +++AA V L + +EF+GYD L
Sbjct: 406 TEDFAGEQGIEVDREGFEREMEAQRERARAARQDVDSMQVQGGVLGDFKEKSEFVGYDQL 465
Query: 519 SAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAV 578
+A V +L+V+ + V V G +++L++TPFYAESGGQ+ D G L G
Sbjct: 466 RTQAKVLALIVDDQFVDIVPSGQSCQIILDQTPFYAESGGQVADQGVL-TADGLE----- 519
Query: 579 VEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKV 638
V++KDV+K G VH+G + +G L G V A +D K R +HTATHLL ALK V
Sbjct: 520 VQIKDVQKGPGGQHVHQGQVVKGTLTKGSVVTAEIDEKKRAAIVKNHTATHLLHQALKDV 579
Query: 639 IGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAK 698
+G+ +QAGSLVA DRLRFDF+ + D EL +IE L+N I ++T +L++AK
Sbjct: 580 LGEHVNQAGSLVAPDRLRFDFSHFSAVSDEELHKIETLVNQCIWQHLPVETMYRSLEEAK 639
Query: 699 RAGAIAMFGEKYGEQVKI 716
GA+A+FGEKYGE V++
Sbjct: 640 AMGAMALFGEKYGETVRV 657
>gi|402828609|ref|ZP_10877496.1| alanine--tRNA ligase [Slackia sp. CM382]
gi|402286417|gb|EJU34892.1| alanine--tRNA ligase [Slackia sp. CM382]
Length = 883
Score = 553 bits (1425), Expect = e-154, Method: Compositional matrix adjust.
Identities = 300/682 (43%), Positives = 425/682 (62%), Gaps = 44/682 (6%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPR---AATS 109
IR+++L F+ +G K LPS+SL+P+DP++LLT AGM+QFKP FL V P A T
Sbjct: 9 IREKYLRFFEEKGCKRLPSSSLIPDDPSLLLTSAGMVQFKPYFL-HVKEFDPNYIGATTV 67
Query: 110 QRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWIS 169
Q+C+RTND++ +G T RH +FFEMLGNFSFG YFK E WA+EFST LP +RL+ +
Sbjct: 68 QKCVRTNDIDIIGTTGRHLSFFEMLGNFSFGVYFKHEMCTWAYEFSTEVLELPKDRLYFT 127
Query: 170 VYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPD-RGCSD 228
V+EDDDE EIW K +GVP HI R+G DDNFW +G TGPCGPCSEIY+D PD G +
Sbjct: 128 VFEDDDETIEIW-KSLGVPESHITRLGEDDNFWRAGPTGPCGPCSEIYFDQGPDFEGDAP 186
Query: 229 VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDL 288
D GD RF+EF+N VF Q++ ++DG+L PL KNIDTG+GLER+A I+Q V +NYETD+
Sbjct: 187 GDDGD--RFLEFWNCVFTQFDGQEDGTLAPLPTKNIDTGMGLERMAAIMQGVQSNYETDV 244
Query: 289 IFPIIKKASELANVSY-----AQSND----RTNLNLKIIGDHLRAIVYLLSDGVFPSNIG 339
+ ++ L+ SY A + D + +L+L+I DH R++ ++++DG+ PSN G
Sbjct: 245 LRDLVAVGERLSGASYRGGTNATAGDGAQAKVDLSLRICADHSRSVAFMIADGILPSNEG 304
Query: 340 RGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRIL 399
RGYV+RRL+RRAV G LGI EG FL K IEL + ++ + +
Sbjct: 305 RGYVLRRLLRRAVMHGHKLGI--------EGPFLGEYLAKIIELMGDVYPEIVDNRELVE 356
Query: 400 EELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEIT 459
+ EE RF +TL G+ L D LS GSV L GQ AF L+DT+GFP+E+T
Sbjct: 357 RIILSEEERFGRTLRTGQAYL----VDELSAL--DGSV--LPGQTAFTLHDTYGFPIELT 408
Query: 460 KEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDS-----ADLAEKIPDTEFLG 514
+E+ E GV+VD GFD ME QR +++AA + + A+ +++ + F+G
Sbjct: 409 EEICSESGVTVDHAGFDACMEEQRSRARAATKGDAEAAWSTYGGVHAETLKEVGASIFVG 468
Query: 515 YDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQ 574
Y+ A + + +L+ +G V ++ +G + E++L +TPFYAE GG++GD G + G Q
Sbjct: 469 YEHTEAASSIVALIKDGARVARIEQGEEAELVLAKTPFYAEMGGEVGDTGTIEGAGGRAQ 528
Query: 575 QTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAA 634
V+D K + H+ + +G L VG +V A VD R R +HTATH+L AA
Sbjct: 529 ------VEDTKAPEAGLVCHRVKVVKGSLSVGEDVAAAVDAGRRARITRNHTATHILHAA 582
Query: 635 LKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMAL 694
L++V+G +QAGS V DRLRFDF P+ E++++E L N I A + +L
Sbjct: 583 LRQVLGDHVNQAGSYVGPDRLRFDFAHFAPMTADEIKQVEDLANAVIMSATDMNIYETSL 642
Query: 695 DDAKRAGAIAMFGEKYGEQVKI 716
D+A+ +G A+FGEKYG+ V++
Sbjct: 643 DEARASGVTALFGEKYGDTVRV 664
>gi|88798293|ref|ZP_01113879.1| Alanyl-tRNA synthetase [Reinekea blandensis MED297]
gi|88779069|gb|EAR10258.1| Alanyl-tRNA synthetase [Reinekea sp. MED297]
Length = 868
Score = 553 bits (1425), Expect = e-154, Method: Compositional matrix adjust.
Identities = 307/674 (45%), Positives = 422/674 (62%), Gaps = 45/674 (6%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+RFL+F+ H+V+P+ SLVP +DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 6 IRRRFLEFFEKHEHRVVPAGSLVPGDDPTLLFTNAGMNQFKDVFLGTDRRDYSRATTAQR 65
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI++AW F T E GLP +LW
Sbjct: 66 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAIRFAWTFLTEELGLPKEKLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPD---- 223
++VY+DDDEA +IW ++GV + R+G DNFW G TGPCGPCSEI+YD +
Sbjct: 126 VTVYQDDDEAADIWINDIGVDPNRLSRLGDKDNFWMMGDTGPCGPCSEIFYDHGEEVPGG 185
Query: 224 -RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPN 282
G D DL R+IE +NLVFMQ++ DGS PL + ++DTG+GLER+A ILQ V +
Sbjct: 186 PPGSPDDDL---DRYIEIWNLVFMQFDTLADGSRVPLPKPSVDTGMGLERLAAILQGVHS 242
Query: 283 NYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGY 342
NYE DL +I+ A + + D N +L++I DH+R+ +L++DGV PSN GRGY
Sbjct: 243 NYEIDLFQALIRAAMRVTGCT-----DIENRSLRVIADHIRSTAFLIADGVIPSNEGRGY 297
Query: 343 VVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEEL 402
V+RR+IRRAVR G LG + L + + E EL+ D + + L
Sbjct: 298 VLRRIIRRAVRHGYKLGCQDLFLFKLVDDLVDQMGEAYPELAEQAD--------HVRKVL 349
Query: 403 KREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEV 462
K EE +F +TLE G +L+Q +AD E +P G+ F LYDT+GFP ++T +V
Sbjct: 350 KIEEEQFARTLENGMTILEQGIADI-----EGNVIP---GELVFKLYDTYGFPADLTADV 401
Query: 463 AEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTLSAKA 522
A E G+ +D GF+ M QR+++Q+A+ K +D DLA T FLGY+TL+A+
Sbjct: 402 AREKGLDIDQDGFESRMAEQRKRAQSAN---KFKMDRDLDLALDGA-TNFLGYETLAAEG 457
Query: 523 IVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVK 582
V LL V ++S G + V+L++TPFYAESGGQ GD G + + A +EV
Sbjct: 458 QVIRLLRGEDTVSQLSVGDEGVVILDQTPFYAESGGQAGDRGVI------TTEAASLEVI 511
Query: 583 DVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQE 642
D +K G F+H+ + +GVL+ V A V R+ HH+ATHLL AAL++V+G
Sbjct: 512 DCQKHQGH-FLHQVRVTDGVLKTDDRVAAKVQRNERENTARHHSATHLLHAALREVLGTH 570
Query: 643 TSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGA 702
Q GSLV D+LRFDF+ + EL +IE L+N I + T++M +D AK AGA
Sbjct: 571 VQQRGSLVTHDKLRFDFSHLEAVTAEELVQIETLVNHHIMANAEVTTELMDIDSAKAAGA 630
Query: 703 IAMFGEKYGEQVKI 716
+A+FGEKY +QV++
Sbjct: 631 VALFGEKYDDQVRV 644
>gi|254489976|ref|ZP_05103171.1| alanyl-tRNA synthetase [Methylophaga thiooxidans DMS010]
gi|224465061|gb|EEF81315.1| alanyl-tRNA synthetase [Methylophaga thiooxydans DMS010]
Length = 858
Score = 553 bits (1425), Expect = e-154, Method: Compositional matrix adjust.
Identities = 294/672 (43%), Positives = 427/672 (63%), Gaps = 45/672 (6%)
Query: 57 FLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQRCIRT 115
FLDF+AS+GH+V+ S+ LVP DPT+L T AGM+QFK FLG+ R+ RA T+QRC+R
Sbjct: 2 FLDFFASKGHEVVASSPLVPANDPTLLFTNAGMVQFKETFLGQETRKYTRAVTTQRCVRA 61
Query: 116 ----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWISVY 171
ND+ENVG T+RHHTFFEMLGNFSFGDYFK+EAIQ+AWEF T LP +LWI+V+
Sbjct: 62 GGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKREAIQYAWEFLTETLALPPEKLWITVF 121
Query: 172 EDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPD--RGCSDV 229
E+DDEA +IW KE+GV + R+GA DNFW+ G TGPCGPCSEI+YD D G
Sbjct: 122 EEDDEAADIWLKEIGVSADRFSRIGAKDNFWSMGDTGPCGPCSEIFYDHGEDIAGGPPGT 181
Query: 230 DLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDLI 289
D R+IE +NLVFMQ+++ DG+L PL + ++DTG+GLER+A +LQ V NNYE DL
Sbjct: 182 PEEDGDRYIEIWNLVFMQFDRSADGTLTPLPKPSVDTGMGLERLAAVLQHVHNNYEIDLF 241
Query: 290 FPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLIR 349
+I+ L+ + D +N +L++I DH+R+ ++++DGV PSN GRGYV+RR+IR
Sbjct: 242 QHLIEAIQALSG-----TEDSSNFSLRVIADHIRSCSFMIADGVHPSNEGRGYVLRRIIR 296
Query: 350 RAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELRF 409
RA+R G LG+K AF + + + ++K + + + L +EE RF
Sbjct: 297 RAIRHGHKLGLK--------EAFFHKLVQPLVNEMGDAFPELKQAQALVEKALLQEENRF 348
Query: 410 VQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGVS 469
TL+ G ++LDQ + D + + G+ FLLYDT+GFP+++T ++A E G++
Sbjct: 349 ADTLDNGLRILDQAIEDMGDK--------EIPGETVFLLYDTYGFPIDLTADIARERGLT 400
Query: 470 VDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIP---DTEFLGYDTLSAKAIVES 526
+D+ GF+ ME QR ++++A + L+E+I +T F GY + +
Sbjct: 401 IDIAGFERAMEAQRTRARSASQF-------AGGLSEQIAIDGETAFCGYSQTQETGTITA 453
Query: 527 LLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVKK 586
++ +G+ V ++ G + ++L+ TPFYAESGGQ+GD+G + A V D +K
Sbjct: 454 IIADGEHVDQLEAGQEGVLVLDHTPFYAESGGQVGDHGEI------TSDNASFTVSDTRK 507
Query: 587 SLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQA 646
G F H G G VG+ V A +D RQ ++H+ATHLL AAL+ V+G Q
Sbjct: 508 Q-GKAFTHIGRCEHGQFHVGQSVTAQIDESNRQATALNHSATHLLHAALRNVLGDHVMQK 566
Query: 647 GSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAMF 706
GSLV RLRFDF+ P+ +L +IER++N I + + TK+MA+++AK++GA+A+F
Sbjct: 567 GSLVDPQRLRFDFSHFEPVTPDQLHDIERMVNQQIRLNHPVDTKLMAIEEAKKSGAMALF 626
Query: 707 GEKYGEQVKISS 718
GEKY ++V++ S
Sbjct: 627 GEKYDDEVRVLS 638
>gi|449471976|ref|XP_004153458.1| PREDICTED: alanine--tRNA ligase-like [Cucumis sativus]
Length = 796
Score = 553 bits (1425), Expect = e-154, Method: Compositional matrix adjust.
Identities = 318/692 (45%), Positives = 441/692 (63%), Gaps = 68/692 (9%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 87 IRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 146
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 147 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQYAWELLTGENWFNLPKER 206
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEAF+IW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 207 LWVTVYETDDEAFDIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 266
Query: 219 DFHPDR------GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLER 272
D H D G ++ D GD R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLER
Sbjct: 267 D-HGDHIWGGPPGSAEED-GD--RYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLER 322
Query: 273 IARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDG 332
IA +LQ V +NYE DL +IK +E+ + D N +L++I DH+R+ +L++DG
Sbjct: 323 IAAVLQHVNSNYEIDLFSTLIKAVAEVTGAT-----DLNNKSLRVIADHIRSCAFLIADG 377
Query: 333 VFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVK 392
V PSN RGYV+RR+IRRA+R G +LG K L G + + EL K
Sbjct: 378 VIPSNENRGYVLRRIIRRAIRHGNMLGAKDTFFYKLVGPLIGVMGSAGDEL--------K 429
Query: 393 AREQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTF 452
++ ++ + LK EE +F +TLERG LLD LA T L G+ AF LYDT+
Sbjct: 430 RQQAQVEQVLKTEEEQFARTLERGLALLDDELAKLKGDT--------LDGETAFRLYDTY 481
Query: 453 GFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQ------AAHNAVKLSVDDSADLAEK 506
GFPV++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 482 GFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARESSGFGADYNAM-IRVDSA------ 534
Query: 507 IPDTEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFL 566
+EF GY+ L+ + V +L V+GK V +S G D V+L++TPFYAESGGQ+GD G L
Sbjct: 535 ---SEFKGYEELALTSNVTALFVDGKAVDSISAGQDAVVILDKTPFYAESGGQVGDKGEL 591
Query: 567 YVTQGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHT 626
+G +V + + +++G H+G + G L+VG V+A VD R R +++H+
Sbjct: 592 ---KGNGFSFSVSDTQKYGQAIG----HQGKLVSGSLKVGEGVQANVDEARRARIRLNHS 644
Query: 627 ATHLLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANL 686
ATHL+ AAL++V+G +Q GSLV LRFDF+ + +E+ +E L+N I
Sbjct: 645 ATHLMHAALREVLGTHVAQKGSLVNDKVLRFDFSHFEAMKPSEIRAVEDLVNAQIRRNLP 704
Query: 687 LQTKVMALDDAKRAGAIAMFGEKYGEQVKISS 718
++T +M L+ AK+ GA+A+FGEKY ++V++ S
Sbjct: 705 IETHIMDLEAAKKKGAMALFGEKYDDRVRVLS 736
>gi|302550143|ref|ZP_07302485.1| alanyl-tRNA synthetase [Streptomyces viridochromogenes DSM 40736]
gi|302467761|gb|EFL30854.1| alanyl-tRNA synthetase [Streptomyces viridochromogenes DSM 40736]
Length = 890
Score = 553 bits (1425), Expect = e-154, Method: Compositional matrix adjust.
Identities = 294/678 (43%), Positives = 422/678 (62%), Gaps = 33/678 (4%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQRC 112
IR+R+L F+ RGH V+PSASL+ +DPT+LL AGM+ FKP FLG+V RA + Q+C
Sbjct: 6 IRRRWLSFFEERGHTVVPSASLIADDPTLLLVPAGMVPFKPYFLGEVKPPFSRATSVQKC 65
Query: 113 IRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE-----FGLPANRLW 167
+RT D+E VG+T+RH TFF+M GNFSFGDYFK+ AI +AWE T +GL RLW
Sbjct: 66 VRTPDIEEVGKTTRHGTFFQMCGNFSFGDYFKEGAITYAWELLTSPQDKGGYGLDPERLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCS 227
I+VY+DDDEA IW++ VGVP E I+R+G DN+W+ G GPCGPCSEI YD P+ G
Sbjct: 126 ITVYKDDDEAERIWHEVVGVPKERIQRLGMKDNYWSMGVPGPCGPCSEINYDRGPEFGVE 185
Query: 228 DVDLGDDTRFIEFYNLVFMQYNKKDDGS------LEPLKQKNIDTGLGLERIARILQKVP 281
+D R++E +NLVFMQY + + L L KNIDTGLGLER+A ILQ V
Sbjct: 186 GGPAVNDERYVEIWNLVFMQYVRGEGTGKDSFEILGELPSKNIDTGLGLERLAMILQGVQ 245
Query: 282 NNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRG 341
N YE D +I KA+EL V Y ++D ++++L+++ DH+R V L+ DGV P N GRG
Sbjct: 246 NMYEIDTSMAVINKATELTGVRYGDAHD-SDVSLRVVTDHMRTSVMLIGDGVTPGNEGRG 304
Query: 342 YVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEE 401
YV+RR++RRA+R RLLG G + + + IE+ ++ +RI +
Sbjct: 305 YVLRRIMRRAIRNMRLLGAT--------GPVVKDLVDTVIEMMGQQYPELITDRERIEKV 356
Query: 402 LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKE 461
EE F++TL+ G +LD + D T+ +GS L G AFLL+DT+GFP+++T E
Sbjct: 357 ALAEENAFLKTLKAGTNILDTAVTD----TKAAGSTV-LPGDKAFLLHDTWGFPIDLTLE 411
Query: 462 VAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSA---DLAEKIPDTEFLGYDTL 518
+A E G+SVD GF M+ QR +++A A K + ++A++ T+F+GY
Sbjct: 412 MAAEQGLSVDEDGFRRLMKEQRERAKADAQAKKTGHAGAGAYREIADQAGATDFIGYTDT 471
Query: 519 SAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAV 578
+++ + +LV+G ++G +VE++L+RTPFYAE GGQIGD G + V G AV
Sbjct: 472 ESESTIVGILVDGASSPAATEGDEVEIVLDRTPFYAEGGGQIGDTGKIKVDTG-----AV 526
Query: 579 VEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKV 638
+E++D +K + V+VHKG ++ G + VG + A +D + R H+ATHL AL+
Sbjct: 527 IEIRDCQKPVPGVYVHKGVVQVGEVTVGAKAHASIDGRRRTAIARAHSATHLTHQALRDA 586
Query: 639 IGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAK 698
+G +QAGS R RFDF + + ++E+ IN + +Q +VM +D+AK
Sbjct: 587 LGPTAAQAGSENQPGRFRFDFGSPSAVPTAVMTDVEQKINEVLARDLDVQAEVMGIDEAK 646
Query: 699 RAGAIAMFGEKYGEQVKI 716
+ GAIA FGEKYGE+V++
Sbjct: 647 KQGAIAEFGEKYGERVRV 664
>gi|421696585|ref|ZP_16136167.1| alanine--tRNA ligase [Acinetobacter baumannii WC-692]
gi|404561346|gb|EKA66581.1| alanine--tRNA ligase [Acinetobacter baumannii WC-692]
Length = 883
Score = 553 bits (1425), Expect = e-154, Method: Compositional matrix adjust.
Identities = 299/682 (43%), Positives = 430/682 (63%), Gaps = 48/682 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FL ++ ++GH + S+SLVP DPT+L T AGM QFK FLG R RA TSQ+
Sbjct: 11 IREAFLRYFETQGHTRVASSSLVPANDPTLLFTNAGMNQFKDCFLGLEKRDYVRATTSQK 70
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND++NVG T+RHHTFFEMLGNFSFGDYFK++A+++AWEF T E LP ++
Sbjct: 71 CVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKRDALKFAWEFLTSEQWLALPKDK 130
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
L+++VY DDEA++IWNKE+G+ E I R+G A DNFW G TGPCGPCSEI++
Sbjct: 131 LYVTVYHTDDEAYDIWNKEIGLAPERIIRIGDNKGEKYASDNFWAMGDTGPCGPCSEIFF 190
Query: 219 DF--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARI 276
D H G D RFIE +N VFMQ+N+ DG L PL ++DTG+GLERI+ +
Sbjct: 191 DHGEHIWGGLPGSPEEDGDRFIEIWNNVFMQFNRTADGVLHPLPAPSVDTGMGLERISAV 250
Query: 277 LQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPS 336
LQ V +NY+ DL ++K A+ + + D +L+++ DH R+ +L++DGV PS
Sbjct: 251 LQHVNSNYDIDLFQHLLKAAANIIGIE-----DEGQPSLRVVADHARSCCFLIADGVNPS 305
Query: 337 NIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQ 396
N GRGYV+RR+IRRAVR G LG G F + + IE+ +++AR +
Sbjct: 306 NEGRGYVLRRIIRRAVRHGNKLGATG--------TFFYKMLQPLIEVMGQAYPELEARRE 357
Query: 397 RILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPV 456
I L REE +F +TLE+G KLL+ LA +T + G F LYDT+GFP
Sbjct: 358 VIEATLIREEEQFAKTLEQGLKLLEGELAQLKDKT--------IPGATVFKLYDTYGFPT 409
Query: 457 EITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYD 516
++T ++A E G +D GF++EM QR Q A +A K +VD + ++ + +T+F GY
Sbjct: 410 DLTADIARERGFIIDEAGFEVEMAAQR---QRARDAGKFAVDYN-NIVKVEGETQFDGYT 465
Query: 517 TLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQT 576
+ + + ++ +G V +VS+G + ++LN+TPFYAESGGQIGD G +T
Sbjct: 466 NTTGQGQIVAIYKDGVQVDEVSEGDEALIVLNQTPFYAESGGQIGDTGIF------KNET 519
Query: 577 AVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALK 636
+ EV+D KKS G FVH+G + G L++ + VEAIV +R+ +H+ATHLL AAL+
Sbjct: 520 GIFEVQDTKKS-GGAFVHQGIVTVGNLKISQNVEAIVKADIREATARNHSATHLLHAALR 578
Query: 637 KVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDD 696
+++G Q GSLVA D LRFDF +P+ +L+++ERL+N I + T+++ ++
Sbjct: 579 QILGSHVQQKGSLVASDILRFDFANDQPVSFEQLQQVERLVNAEIIANTAVTTELLDIET 638
Query: 697 AKRAGAIAMFGEKYGEQVKISS 718
AK GA+ +FGEKYG++V++ S
Sbjct: 639 AKAKGAMMLFGEKYGDEVRVLS 660
>gi|410657044|ref|YP_006909415.1| Alanyl-tRNA synthetase [Dehalobacter sp. DCA]
gi|410660081|ref|YP_006912452.1| Alanyl-tRNA synthetase [Dehalobacter sp. CF]
gi|409019399|gb|AFV01430.1| Alanyl-tRNA synthetase [Dehalobacter sp. DCA]
gi|409022437|gb|AFV04467.1| Alanyl-tRNA synthetase [Dehalobacter sp. CF]
Length = 877
Score = 553 bits (1425), Expect = e-154, Method: Compositional matrix adjust.
Identities = 300/674 (44%), Positives = 441/674 (65%), Gaps = 29/674 (4%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
+G+ +R+ FL ++ +GH + PSASL+P +DPT+LLT+AGM+ FKP FL +V RA
Sbjct: 3 TGNQLREMFLKYFEGKGHVIQPSASLIPKDDPTLLLTVAGMVPFKPYFLRQVEPPFSRAT 62
Query: 108 TSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
T+Q+C+RT D+E+VG+T+RHHTFFEMLGNFSFGDYFK+E I WAWE+ T +P +LW
Sbjct: 63 TAQKCVRTPDLESVGKTARHHTFFEMLGNFSFGDYFKEEVIPWAWEYITGILQVPVEKLW 122
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCS 227
+++Y +D+EA IW+K GV E I + +NFW +G GPCGPCSEIY D RGC
Sbjct: 123 VTIYPEDEEARNIWSK-AGVSPERI--VADPENFWAAGPVGPCGPCSEIYVDLGESRGCG 179
Query: 228 --DVDLGDDT-RFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNY 284
D +G D RF+E +NLVFMQY + + G+L PL ++NIDTG+GLERIA ++Q V +N+
Sbjct: 180 KDDCAIGCDCDRFLEVWNLVFMQYIRDEAGTLTPLPKRNIDTGMGLERIASVIQGVESNF 239
Query: 285 ETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVV 344
+TDL P+I K +E+A + Y + + +T++ LK++ DH RA+ ++L+DG+ PS+ GRGYV+
Sbjct: 240 DTDLFMPLINKTAEIAGLQY-KEDPKTDVALKVVADHARAVSFMLADGIRPSSDGRGYVL 298
Query: 345 RRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKR 404
RR++RR++R RLLGI E FL I E H +++K E IL L+
Sbjct: 299 RRILRRSIRFARLLGI--------EKPFLEQIFRVIQEHYAHWYTELKENENFILNHLRL 350
Query: 405 EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAE 464
EE F TLE+G +L D + RESG LSG+DAF LY+T+GFPVE+T+E+
Sbjct: 351 EEKNFQATLEQGMLILQ----DKVKAFRESGQ-KILSGEDAFHLYETYGFPVELTEEMLL 405
Query: 465 EHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDS--ADLAEKIPDTEFLGYDTLSAKA 522
E G+SVDM+ FD E R ++ +K + ++S + A+++ T FLGY+ L + +
Sbjct: 406 EEGISVDMESFDKASEEHRLLAKERSRQMKAAGENSLLTEKAKRLGPTRFLGYEQLESDS 465
Query: 523 IVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVK 582
I+E++ V +G +V LL++TPFYAESGGQI D G + + A EV
Sbjct: 466 IIEAMFNEEGEVDGAGEGEEVICLLDQTPFYAESGGQISDEGIIRTGK------AYAEVL 519
Query: 583 DVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQE 642
+++K H+ I++GVL++G +V +V+ + R+ HH++THLLQ AL+K++G
Sbjct: 520 ELRKLPSGAITHRLLIKDGVLKIGEKVHTVVNKEKRKAIAGHHSSTHLLQTALRKILGDH 579
Query: 643 TSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGA 702
QAGSLV +RLRFDF+ PL ++ E+E +N I + +Q + M+++ A+ GA
Sbjct: 580 VQQAGSLVTSERLRFDFSHFSPLTAEQITEVENNVNRQIMASLTVQAEEMSMNQAREKGA 639
Query: 703 IAMFGEKYGEQVKI 716
IA+FGEKYGE V++
Sbjct: 640 IALFGEKYGEIVRL 653
>gi|365891765|ref|ZP_09430146.1| alanyl-tRNA synthetase [Bradyrhizobium sp. STM 3809]
gi|365332251|emb|CCE02677.1| alanyl-tRNA synthetase [Bradyrhizobium sp. STM 3809]
Length = 891
Score = 553 bits (1424), Expect = e-154, Method: Compositional matrix adjust.
Identities = 299/678 (44%), Positives = 421/678 (62%), Gaps = 35/678 (5%)
Query: 51 DSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATS 109
+ IR FL+F+A+ GH+++PS+ LVP DPT++ T AGM+QFK +F G R RA TS
Sbjct: 5 NEIRSTFLNFFAANGHEIVPSSPLVPRNDPTLMFTNAGMVQFKNVFTGVEKRPYHRATTS 64
Query: 110 QRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANR 165
Q+C+R ND++NVG T+RHHTFFEMLGNFSFGDYFK+ AI+ AW+ T EFGLP ++
Sbjct: 65 QKCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKENAIELAWKLVTKEFGLPKDK 124
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDR- 224
L +VY DDDEAF +W K G+P I R+ DNFW G TGPCGPCSEI+YD H D+
Sbjct: 125 LTATVYIDDDEAFGLWKKIAGLPESRIIRIAGSDNFWQMGDTGPCGPCSEIFYD-HGDKI 183
Query: 225 --GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPN 282
G D RFIE +NLVFMQY + + GS L + +IDTG GLER+A +LQ +
Sbjct: 184 WGGPPGSPEADGDRFIEIWNLVFMQYEQHEGGSRTSLPKPSIDTGAGLERVAAVLQGKHD 243
Query: 283 NYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGY 342
NY+ DL +I+ ++L N A +L++I DHLRA +L++DGV PSN GRGY
Sbjct: 244 NYDIDLFVALIRAIADLTN---ADPQGPQKASLRVIADHLRASSFLIADGVLPSNEGRGY 300
Query: 343 VVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEEL 402
V+RR++RRA+R +LLG + L GA + + EL ++A E I E L
Sbjct: 301 VLRRIMRRAMRHAQLLGAREPLMHKLVGALTREMGQAYPEL-------IRA-EALIKETL 352
Query: 403 KREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEV 462
+ EE RF +TLERG +LD+ A +LS+ G AF LYDT+GFP+++T++
Sbjct: 353 RLEETRFRKTLERGLAILDEKSA-SLSKG------DMFDGDVAFTLYDTYGFPLDLTQDA 405
Query: 463 AEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSA--DLAEKIPDTEFLGYDTLSA 520
+ G+SVD F ME Q+ +++AA + ++ L EK+ TEFLGYDT +A
Sbjct: 406 LKSRGISVDQASFTDAMERQKAKARAAWAGSGEAATETVWFPLREKLGATEFLGYDTETA 465
Query: 521 KAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVE 580
+ V +L+ +G V + G ++LN+TPFY ESGGQ+GD G + V
Sbjct: 466 EGAVTALVKDGAEVDSLKAGESGIIVLNQTPFYGESGGQVGDTGVM------TGDGVRVR 519
Query: 581 VKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIG 640
+ D +K G +F H GT+ +G L+ G ++ VD R + +H+ATH+L AL++V+G
Sbjct: 520 ITDTQKKAGDLFAHLGTVEQGTLKPGTALQLEVDHSRRSAIRANHSATHILHEALRQVLG 579
Query: 641 QETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRA 700
+Q GSLV+ DRLRFDF +P+ EL +E + N + + + T++M LDDA+ A
Sbjct: 580 DHIAQRGSLVSPDRLRFDFVHPKPITAEELARVEDIANDVVLENAEVTTRLMGLDDAREA 639
Query: 701 GAIAMFGEKYGEQVKISS 718
GA A+FGEKYG++V++ S
Sbjct: 640 GARALFGEKYGDEVRVVS 657
>gi|417551344|ref|ZP_12202422.1| alanine--tRNA ligase [Acinetobacter baumannii Naval-18]
gi|417566314|ref|ZP_12217188.1| alanine--tRNA ligase [Acinetobacter baumannii OIFC143]
gi|395558070|gb|EJG24071.1| alanine--tRNA ligase [Acinetobacter baumannii OIFC143]
gi|400385799|gb|EJP48874.1| alanine--tRNA ligase [Acinetobacter baumannii Naval-18]
Length = 885
Score = 553 bits (1424), Expect = e-154, Method: Compositional matrix adjust.
Identities = 299/682 (43%), Positives = 429/682 (62%), Gaps = 48/682 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FL ++ ++GH + S+SLVP DPT+L T AGM QFK FLG R RA TSQ+
Sbjct: 13 IREAFLRYFETQGHTRVASSSLVPANDPTLLFTNAGMNQFKDCFLGLEKRDYVRATTSQK 72
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND++NVG T+RHHTFFEMLGNFSFGDYFK++A+++AWEF T E LP ++
Sbjct: 73 CVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKRDALKFAWEFLTSEQWLALPKDK 132
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
L+++VY DDEA++IWNKE+G+ E I R+G A DNFW G TGPCGPCSEI++
Sbjct: 133 LYVTVYHTDDEAYDIWNKEIGLAPERIIRIGDNKGEKYASDNFWAMGDTGPCGPCSEIFF 192
Query: 219 DF--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARI 276
D H G D RFIE +N VFMQ+N+ DG L PL ++DTG+GLERI+ +
Sbjct: 193 DHGEHIWGGLPGSPEEDGDRFIEIWNNVFMQFNRTADGVLHPLPAPSVDTGMGLERISAV 252
Query: 277 LQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPS 336
LQ V +NY+ DL ++K A+ + + D +L+++ DH R+ +L++DGV PS
Sbjct: 253 LQHVNSNYDIDLFQHLLKAAANIIGIE-----DEGQPSLRVVADHARSCCFLIADGVNPS 307
Query: 337 NIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQ 396
N GRGYV+RR+IRRAVR G LG G F + + IE+ +++AR +
Sbjct: 308 NEGRGYVLRRIIRRAVRHGNKLGATG--------TFFYKMLQPLIEVMGQAYPELEARRE 359
Query: 397 RILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPV 456
I L REE +F +TLE+G KLL+ LA +T + G F LYDT+GFP
Sbjct: 360 VIEATLSREEEQFAKTLEQGLKLLEGELAQLKDKT--------IPGATVFKLYDTYGFPT 411
Query: 457 EITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYD 516
++T ++A E G +D GF++EM QR Q A +A K +VD + ++ + +T+F GY
Sbjct: 412 DLTADIARERGFIIDEAGFEVEMAAQR---QRARDAGKFAVDYN-NIVKVEGETQFDGYT 467
Query: 517 TLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQT 576
+ + + ++ +G V +VS+G + ++LN+TPFYAESGGQIGD G +T
Sbjct: 468 NTTGQGQIVAIYKDGVQVDEVSEGDEALIVLNQTPFYAESGGQIGDTGIF------KNET 521
Query: 577 AVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALK 636
+ EV+D KKS G FVH+G + G L+ + VEAIV +R+ +H+ATHLL AAL+
Sbjct: 522 GIFEVQDTKKS-GGAFVHQGIVTVGNLKTSQNVEAIVKADIREATARNHSATHLLHAALR 580
Query: 637 KVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDD 696
+++G Q GSLVA D LRFDF +P+ +L+++ERL+N I + T+++ ++
Sbjct: 581 QILGSHVQQKGSLVASDILRFDFANDQPVSFEQLQQVERLVNAEIIANTAVTTELLDIET 640
Query: 697 AKRAGAIAMFGEKYGEQVKISS 718
AK GA+ +FGEKYG++V++ S
Sbjct: 641 AKAKGAMMLFGEKYGDEVRVLS 662
>gi|310658795|ref|YP_003936516.1| alanyl-tRNA synthetase [[Clostridium] sticklandii]
gi|308825573|emb|CBH21611.1| alanyl-tRNA synthetase [[Clostridium] sticklandii]
Length = 882
Score = 553 bits (1424), Expect = e-154, Method: Compositional matrix adjust.
Identities = 299/675 (44%), Positives = 433/675 (64%), Gaps = 27/675 (4%)
Query: 51 DSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATS 109
+ IR+++L F+ S+ H S SLVPE D ++LL AGM K F+G R AT
Sbjct: 7 NEIREKYLSFFRSKDHYSRSSFSLVPENDKSLLLINAGMAPMKNYFMGLETPPNKRMATC 66
Query: 110 QRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWIS 169
Q+C+RT D+ENVG+T+RH TFFEMLGNFSFGDYFKKEAI WAWEF T + L + LW++
Sbjct: 67 QKCVRTGDIENVGKTARHATFFEMLGNFSFGDYFKKEAIAWAWEFVTKDLELNPDDLWVT 126
Query: 170 VYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSG-ATGPCGPCSEIYYDFHPDRGCSD 228
VY +DDEAF+IW K++ VP E I R+G +DNFW G TGPCGPCSEIY D + GCSD
Sbjct: 127 VYLEDDEAFDIWEKDINVPKERIVRLGKEDNFWEIGTGTGPCGPCSEIYIDRGKEFGCSD 186
Query: 229 VDL---GDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYE 285
D D RF+EF+NLVF Q+NK +DG+ PL NIDTG+GLER+A I+Q V + ++
Sbjct: 187 PDCKPGCDCDRFLEFWNLVFTQFNKDEDGNYNPLPNPNIDTGMGLERMACIMQGVDSIFD 246
Query: 286 TDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVR 345
D + I EL+ Y +S + T++++++I DH RA+ +L+SDGV PSN GRGYV+R
Sbjct: 247 IDTMKSIRDNVCELSGKEYGKSTE-TDVSIRLITDHSRAVTFLISDGVLPSNEGRGYVLR 305
Query: 346 RLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKRE 405
RLIRRA R GRLLGIK + FL + E IE D+ +++ I + L E
Sbjct: 306 RLIRRAARHGRLLGIKNN--------FLVKLMETVIENYGEAYPDLVEKKEYIKKILTVE 357
Query: 406 ELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEE 465
E +F +TL++G +L + + S +++ LSG+DAF LYDT+GFP+E+T E+ EE
Sbjct: 358 EEKFSETLDQGMVILKEYMDKIKSESKDV-----LSGEDAFRLYDTYGFPIELTLEIVEE 412
Query: 466 HGVSVDMKGFDIEMENQRRQSQAAHN--AVKLSVDDSADLAEKIPDTEFLGYDTLSAKAI 523
+G+ VD GF EM+ Q+ ++++A V+ + + L I EF+GY+ L A A
Sbjct: 413 YGLKVDEDGFKAEMQKQKERARSARTDKGVEGWKETADTLTFSIEKNEFIGYNELEASAQ 472
Query: 524 VESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKD 583
++ ++ + + + +S+G E++ +TPFYAESGGQ+ D G + + V EVKD
Sbjct: 473 IKDIIFDNQKIDILSEGQAGELVFEKTPFYAESGGQVADKGIV------KSENFVAEVKD 526
Query: 584 VKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQET 643
V+KS +F+H+ + G ++ + E +VD KLR+ + +HT THLL AL++V+G
Sbjct: 527 VQKSHNGLFIHRVEVVSGEAKLSDKCELVVDEKLRKSTQRNHTCTHLLHKALRQVLGAHI 586
Query: 644 SQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAI 703
QAGSLV+ RLRFDF P+ +L +IE ++N I A ++ +VM +++AK++GA+
Sbjct: 587 HQAGSLVSDTRLRFDFTHFEPITSEQLSQIENMVNEAIFKAYPVKVEVMNIEEAKKSGAM 646
Query: 704 AMFGEKYGEQVKISS 718
A+F EKY + V++ S
Sbjct: 647 ALFDEKYEDNVRVVS 661
>gi|453053380|gb|EMF00846.1| alanyl-tRNA ligase [Streptomyces mobaraensis NBRC 13819 = DSM
40847]
Length = 889
Score = 553 bits (1424), Expect = e-154, Method: Compositional matrix adjust.
Identities = 303/678 (44%), Positives = 428/678 (63%), Gaps = 33/678 (4%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQRC 112
IR+R+L F+ RGH V+PSASL+ +DPT+LL AGM+ FKP FLG+V RA + Q+C
Sbjct: 6 IRRRWLRFFEERGHTVVPSASLIADDPTLLLVPAGMVPFKPYFLGEVKPPFSRATSVQKC 65
Query: 113 IRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE-----FGLPANRLW 167
+RT D+E VG+T+RH TFF+M GNFSFGDYFK+ AI+ +WE T +GL +LW
Sbjct: 66 VRTPDIEEVGKTTRHGTFFQMCGNFSFGDYFKEGAIKLSWELLTTPVADGGYGLDPEKLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCS 227
I+VY+DDDEA IW VGVP E I+R+G DNFW+ G GPCGPCSEI YD P+ G
Sbjct: 126 ITVYQDDDEAERIWRDTVGVPAERIQRLGKKDNFWSMGVPGPCGPCSEINYDRGPEFGPE 185
Query: 228 DVDLGDDTRFIEFYNLVFMQY------NKKDDGSLEPLKQKNIDTGLGLERIARILQKVP 281
+D R++E +NLVFMQY K+D L L KNIDTGLGLER+A ILQ V
Sbjct: 186 GGPAVNDERYVEIWNLVFMQYERGAGDGKEDFPILGDLPAKNIDTGLGLERLAMILQGVR 245
Query: 282 NNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRG 341
N YETD + +I KA+EL V+Y ++ D ++++L+++ DH+R V L+ DGV P N GRG
Sbjct: 246 NMYETDTLRVVIDKATELTGVAYGKAAD-SDVSLRVVADHMRTSVMLIGDGVTPGNEGRG 304
Query: 342 YVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEE 401
YV+RR++RRA+R R+LG G +L + ++ ++ EL ++ R +RI
Sbjct: 305 YVLRRIMRRAIRNMRMLGATGPVVADLLDVIINTMGQQYPEL-------IEDR-KRIETV 356
Query: 402 LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKE 461
EE F++TL+ G +LD A++ T+ +G L+G+ AFLL+DT+GFP+++T E
Sbjct: 357 ALAEEAAFLKTLKAGTNILDT----AVTETKAAGGTV-LAGEKAFLLHDTWGFPIDLTLE 411
Query: 462 VAEEHGVSVDMKGFDIEMENQR-RQSQAAHNAVKLSVDDSA--DLAEKIPDTEFLGYDTL 518
+A E G++VD GF M+ QR R A D SA ++A+ T+F GY
Sbjct: 412 MAAEQGLAVDEDGFRRLMKEQRERAKADAKAKKTGHADLSAYREVADTAGATDFTGYTLT 471
Query: 519 SAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAV 578
+A V LLV+G P S+G +VE++L+RTPFYAE GGQ+ D G + + G AV
Sbjct: 472 ENEATVVGLLVDGVPSPAASEGDEVEIVLDRTPFYAEGGGQLADQGRIKLHNG-----AV 526
Query: 579 VEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKV 638
VE++DV+K + V VHKG ++ G + VG A++D K R+ H+ATHL AL+
Sbjct: 527 VEIRDVQKPVPGVNVHKGVVQVGEVTVGASAYAVIDVKRRRAIARAHSATHLTHQALRDA 586
Query: 639 IGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAK 698
+G +QAGS + R RFDF + T L ++E+ IN + + ++M+LD+AK
Sbjct: 587 LGPTAAQAGSENSPGRFRFDFGSPAAVPGTVLTDVEQRINEVLSRELDVHAEIMSLDEAK 646
Query: 699 RAGAIAMFGEKYGEQVKI 716
++GAIA FGEKYGE+V++
Sbjct: 647 KSGAIAEFGEKYGERVRV 664
>gi|21220002|ref|NP_625781.1| alanyl-tRNA synthetase [Streptomyces coelicolor A3(2)]
gi|289772786|ref|ZP_06532164.1| alanyl-tRNA synthetase [Streptomyces lividans TK24]
gi|22096206|sp|Q9KXP9.1|SYA_STRCO RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|8249960|emb|CAB93381.1| alanine tRNA synthetase [Streptomyces coelicolor A3(2)]
gi|289702985|gb|EFD70414.1| alanyl-tRNA synthetase [Streptomyces lividans TK24]
Length = 890
Score = 553 bits (1424), Expect = e-154, Method: Compositional matrix adjust.
Identities = 301/680 (44%), Positives = 426/680 (62%), Gaps = 37/680 (5%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQRC 112
IR+R+L F+ RGH V+PSASL+ +DPT+LL AGM+ FKP FLG+V RA + Q+C
Sbjct: 6 IRRRWLSFFEERGHTVVPSASLIADDPTLLLVPAGMVPFKPYFLGEVKPPFDRATSVQKC 65
Query: 113 IRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE-----FGLPANRLW 167
+RT D+E VG+T+RH TFF+M GNFSFGDYFK+ AI +AWE T +GL RLW
Sbjct: 66 VRTPDIEEVGKTTRHGTFFQMCGNFSFGDYFKEGAITYAWELLTSAQDKGGYGLDPERLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCS 227
I+VY+DDDEA IW+ VGVP E I+R+G DN+W+ G GPCGPCSEI YD P+ G
Sbjct: 126 ITVYQDDDEAERIWHDVVGVPSERIQRLGKKDNYWSMGVPGPCGPCSEINYDRGPEFGVE 185
Query: 228 DVDLGDDTRFIEFYNLVFMQY------NKKDDGSLEPLKQKNIDTGLGLERIARILQKVP 281
+D R++E +NLVFMQY K++ L L KNIDTGLGLER+A ILQ V
Sbjct: 186 GGPAVNDERYVEIWNLVFMQYERGEGIGKEEFEILGELPSKNIDTGLGLERLAMILQGVQ 245
Query: 282 NNYETDLIFPIIKKASELANVSY--AQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIG 339
N YE D +I KA+EL V+Y AQ++D ++L+++ DH+R V L+ DGV P N G
Sbjct: 246 NMYEIDTSMAVINKATELTGVAYGDAQASD---VSLRVVTDHMRTSVMLIGDGVTPGNEG 302
Query: 340 RGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRIL 399
RGYV+RR++RRA+R RLLG G +L + + ++ EL T +RI
Sbjct: 303 RGYVLRRIMRRAIRNMRLLGATGPVVKDLIDVVIGMMGQQYPELVTD--------RERIE 354
Query: 400 EELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEIT 459
+ EE F++TL+ G +LD A+S T+ SG L+G AFLL+DT+GFP+++T
Sbjct: 355 KVALAEENAFLKTLKAGTNILDT----AVSDTKASGGTV-LAGDKAFLLHDTWGFPIDLT 409
Query: 460 KEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSA---DLAEKIPDTEFLGYD 516
E+A E G+SVD GF M+ QR +++A A K + ++A+K T+F+GY
Sbjct: 410 LEMAAEQGLSVDEDGFRRLMKEQRERAKADAQAKKTGHAGAGAYREIADKAGATDFVGYT 469
Query: 517 TLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQT 576
+++ + +LV+G ++G +VE++L+RTPFYAE GGQIGD G + V G
Sbjct: 470 DTESESTIVGILVDGASSPAATEGDEVEIVLDRTPFYAEGGGQIGDTGRIRVDTG----- 524
Query: 577 AVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALK 636
AV+EV+D +K + V+VHKG ++ G + VG + +A +D + R+ H+ATHL AL+
Sbjct: 525 AVIEVRDCQKPVPGVYVHKGVVQVGEVTVGAKAQASIDDRRRKAIARAHSATHLTHQALR 584
Query: 637 KVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDD 696
+G +QAGS R RFDF + + ++E+ IN + ++ VM +D+
Sbjct: 585 DALGPTAAQAGSENQPGRFRFDFGSPSAVPTAVMTDVEQKINEVLARDLDVRADVMGIDE 644
Query: 697 AKRAGAIAMFGEKYGEQVKI 716
AK+ GAIA FGEKYGE+V++
Sbjct: 645 AKKQGAIAEFGEKYGERVRV 664
>gi|456386024|gb|EMF51577.1| alaS protein [Streptomyces bottropensis ATCC 25435]
Length = 890
Score = 553 bits (1424), Expect = e-154, Method: Compositional matrix adjust.
Identities = 294/678 (43%), Positives = 426/678 (62%), Gaps = 33/678 (4%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQRC 112
IR+R+L F+ RGH V+PSASL+ +DPT+LL AGM+ FKP FLG+V RA + Q+C
Sbjct: 6 IRRRWLSFFEERGHTVVPSASLIADDPTLLLVNAGMVPFKPYFLGEVKPSFARATSVQKC 65
Query: 113 IRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE-----FGLPANRLW 167
+RT D+E VG+T+RH TFF+M GNFSFGDYFK+ AI++AWE T +GL +LW
Sbjct: 66 VRTPDIEEVGKTTRHGTFFQMCGNFSFGDYFKEGAIKYAWELLTSPQDKGGYGLEPEKLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCS 227
I+VY+DDDEA IW+++VGVP E I+R+G DN+W+ G GPCGPCSEI YD P+ G
Sbjct: 126 ITVYKDDDEAERIWHEQVGVPKERIQRLGKKDNYWSMGVPGPCGPCSEINYDRGPEFGVE 185
Query: 228 DVDLGDDTRFIEFYNLVFMQYNKKDDGSLE------PLKQKNIDTGLGLERIARILQKVP 281
+D R++E +NLVFMQY + + S E L KNIDTGLGLER+A ILQ V
Sbjct: 186 GGPAVNDERYVEIWNLVFMQYERGEGTSKEDFEILGELPSKNIDTGLGLERLAMILQGVQ 245
Query: 282 NNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRG 341
N YE D +I KA+EL V Y +++ ++++L+++ DH+R V L+ DGV P N GRG
Sbjct: 246 NMYEIDTSMAVIDKATELTGVRYGDAHE-SDVSLRVVTDHIRTAVMLIGDGVTPGNEGRG 304
Query: 342 YVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEE 401
YV+RR++RRA+R RLLG G +L + + ++ EL T +RI +
Sbjct: 305 YVLRRIMRRAIRNMRLLGATGPVVQDLIDVVIAMMGQQYSELITD--------RERIEKV 356
Query: 402 LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKE 461
EE F++TL+ G +LD A++ T+ G L+G AFLL+DT+GFP+++T E
Sbjct: 357 ALAEENAFLKTLKAGTNILDT----AVTETKAGGG-QVLAGDKAFLLHDTWGFPIDLTLE 411
Query: 462 VAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSA---DLAEKIPDTEFLGYDTL 518
+A E G+SVD GF M+ QR +++A A K D ++A+ +TEF+GY
Sbjct: 412 MAAEQGLSVDEDGFRRLMKEQRDRAKADARAKKTGHADLGAYREIADAAGETEFIGYSDT 471
Query: 519 SAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAV 578
++ V +LV+G ++G +VE++L+RTPFYAE GGQIGD G + + G AV
Sbjct: 472 EGESTVVGILVDGLSSPAATEGDEVEIVLDRTPFYAEGGGQIGDTGRIRIDSG-----AV 526
Query: 579 VEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKV 638
+E++D +K + V+VHKG ++ G + VG + +A +D + R H+ATHL AL+
Sbjct: 527 IEIRDCQKPVPGVYVHKGVVQVGEVTVGAKAQASIDGRRRTAIARAHSATHLTHQALRDA 586
Query: 639 IGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAK 698
+G +QAGS R RFDF + + ++E+ IN + + ++++LD+AK
Sbjct: 587 LGPTAAQAGSENQPGRFRFDFGSPSAVPTAVMTDVEQKINEVLSRDLDVHAEILSLDEAK 646
Query: 699 RAGAIAMFGEKYGEQVKI 716
+ GAIA FGEKYGE+V++
Sbjct: 647 KQGAIAEFGEKYGERVRV 664
>gi|221214968|ref|ZP_03587936.1| alanyl-tRNA synthetase [Burkholderia multivorans CGD1]
gi|221165195|gb|EED97673.1| alanyl-tRNA synthetase [Burkholderia multivorans CGD1]
Length = 874
Score = 553 bits (1424), Expect = e-154, Method: Compositional matrix adjust.
Identities = 301/679 (44%), Positives = 420/679 (61%), Gaps = 44/679 (6%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR++FL F+ S+GH ++ S+SLVP DPT++ T +GM+QFK +FLG R RA T+QR
Sbjct: 6 IREKFLKFFESKGHTIVRSSSLVPGNDPTLMFTNSGMVQFKDVFLGTDRRPYTRATTAQR 65
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AI++AWE T + LP ++LW
Sbjct: 66 SVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIRFAWELLTTVYMLPKDKLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYYDF 220
++VY++DDEA++IW KEVGVP E I R+G A DNFW G TGPCGPC+EI+YD
Sbjct: 126 VTVYQEDDEAYDIWAKEVGVPTERIIRIGDNKGARYASDNFWTMGDTGPCGPCTEIFYDH 185
Query: 221 HPD--RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQ 278
P+ G D R+IE +NLVFMQ+N+ G++ L + +DTG+GLER+A +LQ
Sbjct: 186 GPEVWGGPPGSPEEDGDRYIEIWNLVFMQFNRDAQGNMTRLPKPCVDTGMGLERLAAVLQ 245
Query: 279 KVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNI 338
V +NYE DL +IK A+ + V D N +LK+I DH+RA +L+ DGV P N
Sbjct: 246 HVHSNYEIDLFQNLIKAAARVTEV-----GDLNNNSLKVIADHIRACAFLIVDGVIPGNE 300
Query: 339 GRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRI 398
GRGYV+RR++RRA+R G LG K GAF + + ++K EQR+
Sbjct: 301 GRGYVLRRIVRRAIRHGYKLGRK--------GAFFHKLVADLVAEMGAAYPELKEAEQRV 352
Query: 399 LEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEI 458
+ L++EE RF +T+E G +L+ LAD ++ G V L G+ AF L+DT+GFP+++
Sbjct: 353 TDVLRQEEERFFETIEHGMSILESALADLEAK---GGKV--LDGELAFKLHDTYGFPLDL 407
Query: 459 TKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTL 518
T +V E GV+VD FD M QR Q++AA + L T F GY+ +
Sbjct: 408 TADVCRERGVTVDEPAFDDAMARQREQARAAGK-----FKAAQGLEYTGAKTTFHGYEEI 462
Query: 519 S-AKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTA 577
+ A V +L V+G V +V G D V+L+ TPFYAESGGQ+GD G L N T
Sbjct: 463 AFDDAKVVALYVDGSAVTEVKAGQDAVVVLDHTPFYAESGGQVGDQGVL-----ANASTR 517
Query: 578 VVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKK 637
V D K V H GT+ +G L+VG + A +D + R R + +H+ATHL+ AL++
Sbjct: 518 FA-VADTLKVQADVIGHHGTLEQGTLKVGDVLRAEIDAQRRARTQRNHSATHLMHKALRE 576
Query: 638 VIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDA 697
V+G Q GSLV D+ RFDF + PL D E+ +E+++N I +VM D+A
Sbjct: 577 VLGSHVQQKGSLVDADKTRFDFAHNAPLTDDEIRRVEQIVNDEILANAPGIVRVMPYDEA 636
Query: 698 KRAGAIAMFGEKYGEQVKI 716
+ GA+A+FGEKYG++V++
Sbjct: 637 VKGGAMALFGEKYGDEVRV 655
>gi|421632601|ref|ZP_16073249.1| alanine--tRNA ligase [Acinetobacter baumannii Naval-13]
gi|408708709|gb|EKL53979.1| alanine--tRNA ligase [Acinetobacter baumannii Naval-13]
Length = 883
Score = 553 bits (1424), Expect = e-154, Method: Compositional matrix adjust.
Identities = 300/682 (43%), Positives = 429/682 (62%), Gaps = 48/682 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FL ++ ++GH + S+SLVP DPT+L T AGM QFK FLG R RA TSQ+
Sbjct: 11 IREAFLRYFETQGHTRVASSSLVPANDPTLLFTNAGMNQFKDCFLGLEKRDYVRATTSQK 70
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND++NVG T+RHHTFFEMLGNFSFGDYFK++A+++AWEF T E LP ++
Sbjct: 71 CVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKRDALKFAWEFLTSEQWLALPKDK 130
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
L+++VY DDEA++IWNKE+G+ E I R+G A DNFW G TGPCGPCSEI++
Sbjct: 131 LYVTVYHTDDEAYDIWNKEIGLAPERIIRIGDNKGEKYASDNFWAMGDTGPCGPCSEIFF 190
Query: 219 DF--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARI 276
D H G D RFIE +N VFMQ+N+ DG L PL ++DTG+GLERI+ +
Sbjct: 191 DHGEHIWGGLPGSPEEDGDRFIEIWNNVFMQFNRTADGVLHPLPAPSVDTGMGLERISAV 250
Query: 277 LQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPS 336
LQ V +NY+ DL ++K A+ + + D +L+++ DH R+ +L++DGV PS
Sbjct: 251 LQHVNSNYDIDLFQHLLKAAANIIGIE-----DEGQPSLRVVADHARSCCFLIADGVNPS 305
Query: 337 NIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQ 396
N GRGYV+RR+IRRAVR G LG G F + + IE+ +++AR +
Sbjct: 306 NEGRGYVLRRIIRRAVRHGNKLGATG--------TFFYKMLQPLIEVMGQAYPELEARRE 357
Query: 397 RILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPV 456
I L REE +F +TLE+G KLL+ LA +T + G F LYDT+GFP
Sbjct: 358 VIEATLIREEEQFAKTLEQGLKLLEGELAQLKDKT--------IPGATVFKLYDTYGFPT 409
Query: 457 EITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYD 516
++T ++A E G +D GF+IEM QR Q A +A K +VD + ++ + +T+F GY
Sbjct: 410 DLTADIARERGFIIDEAGFEIEMAAQR---QRARDAGKFAVDYN-NIVKVEGETQFDGYT 465
Query: 517 TLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQT 576
+ + + ++ +G V +VS+G + ++LN+TPFYAESGGQIGD G +T
Sbjct: 466 NTTGQGQIVAIYKDGVQVDEVSEGDEALIVLNQTPFYAESGGQIGDTGIF------KNET 519
Query: 577 AVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALK 636
+ EV+D KKS G FVH+G + G L+ + VEAIV +R+ +H+ATHLL AAL+
Sbjct: 520 GIFEVQDTKKS-GGAFVHQGIVTVGNLKTSQNVEAIVKADIREATARNHSATHLLHAALR 578
Query: 637 KVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDD 696
+++G Q GSLVA D LRFDF +P+ +L+++ERL+N I + T+++ ++
Sbjct: 579 QILGSHVQQKGSLVASDILRFDFANDQPVSFEQLQQVERLVNAEIIANTAVTTELLDIET 638
Query: 697 AKRAGAIAMFGEKYGEQVKISS 718
AK GA+ +FGEKYG++V++ S
Sbjct: 639 AKAKGAMMLFGEKYGDEVRVLS 660
>gi|212555700|gb|ACJ28154.1| Alanyl-tRNA synthetase [Shewanella piezotolerans WP3]
Length = 874
Score = 553 bits (1424), Expect = e-154, Method: Compositional matrix adjust.
Identities = 304/680 (44%), Positives = 431/680 (63%), Gaps = 48/680 (7%)
Query: 52 SIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQ 110
++R FL+++ + GH+V+ S+SLVP DPT+L T AGM QFK +FLG+ R RA +SQ
Sbjct: 7 ALRSAFLEYFRTNGHQVVDSSSLVPGNDPTLLFTNAGMNQFKDVFLGEDKRNYTRATSSQ 66
Query: 111 RCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRL 166
RC+R ND++NVG T+RHHTFFEMLGNFSFGDYFK++AI +AW F T E LP RL
Sbjct: 67 RCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKEDAINFAWNFLTKELKLPKERL 126
Query: 167 WISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYYD 219
+++YE D+EA++IW+K+VGV E+I R+G A DNFW G TGPCGPC+EI+YD
Sbjct: 127 CVTIYETDNEAYDIWSKKVGVAPENIIRIGDNKGAAYASDNFWQMGDTGPCGPCTEIFYD 186
Query: 220 F--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARIL 277
H G D RFIE +N+VFMQYN++ DG++ PL + ++DTG+G+ERIA I+
Sbjct: 187 HGEHIWGGRPGTPEEDGDRFIEIWNIVFMQYNRQSDGAMNPLPKPSVDTGMGIERIAAIM 246
Query: 278 QKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSN 337
Q V +NYE D+ +IKK +E+ V+ D N +L++I DH+R+ +L++DGV PSN
Sbjct: 247 QGVHSNYEIDIFQALIKKTAEILGVT-----DLENKSLRVISDHIRSCAFLIADGVMPSN 301
Query: 338 IGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQR 397
GRGYV+RR+IRRAVR G LG +F + IE+ + A +
Sbjct: 302 EGRGYVLRRIIRRAVRHGNKLGAT--------SSFFYKLVPTLIEVMGDAAKGLVATQAI 353
Query: 398 ILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVE 457
+ + LK EE +F +TLERG +LD +ALS + G V L G+ AF LYDT+GFPV+
Sbjct: 354 VEKSLKAEEEQFARTLERGLGILD----NALSGLK--GDV--LDGETAFKLYDTYGFPVD 405
Query: 458 ITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPD-TEFLGYD 516
+T +V E ++VD GF M QR ++QAA + D + L KI + + F+GY
Sbjct: 406 LTADVCRERDITVDEAGFKTAMAEQRSRAQAAG---QFETDYNEGL--KIDEQSGFVGYQ 460
Query: 517 TLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQT 576
L+ +A V ++ G+PV ++ G + ++LN TPFY ESGGQ GD G L + G Q
Sbjct: 461 ELNNQATVTAIYKAGEPVDALNVGDEAVIVLNNTPFYGESGGQCGDKGVL-LADGIEYQV 519
Query: 577 AVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALK 636
A D +K G H G + EG + VG+ + VD KLR R +++H+ THLL AAL+
Sbjct: 520 A-----DTQK-YGQAIGHIGKLAEGSIVVGQSIATNVDKKLRHRTELNHSVTHLLHAALR 573
Query: 637 KVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDD 696
+V+G +Q GSLV +RLRFDF+ + +EL+E+E L+N I + L+ +VM ++
Sbjct: 574 QVLGTHVTQKGSLVDPERLRFDFSHFEGVKASELKEVEELVNTQIRRNHELKAEVMDIEQ 633
Query: 697 AKRAGAIAMFGEKYGEQVKI 716
AK GA+A+FGEKY +V++
Sbjct: 634 AKEKGAMALFGEKYDAEVRV 653
>gi|423201328|ref|ZP_17187908.1| alanyl-tRNA synthetase [Aeromonas veronii AER39]
gi|404617014|gb|EKB13951.1| alanyl-tRNA synthetase [Aeromonas veronii AER39]
Length = 874
Score = 553 bits (1424), Expect = e-154, Method: Compositional matrix adjust.
Identities = 307/685 (44%), Positives = 436/685 (63%), Gaps = 51/685 (7%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S IR FL+++ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA
Sbjct: 4 STSEIRAAFLEYFRSQGHQVVSSSSLVPHNDPTLLFTNAGMNQFKDVFLGADKRAYNRAT 63
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
TSQRC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI++AW F T LP
Sbjct: 64 TSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAIKFAWGFLTEVLQLPK 123
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEI 216
+RL ++VY DDEAF+IW KEVGVP + I R+G A DNFW G TGPCGPC+EI
Sbjct: 124 DRLLVTVYATDDEAFDIWEKEVGVPADRIVRIGDNKGAPYASDNFWAMGDTGPCGPCTEI 183
Query: 217 YYDFHPD-----RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLE 271
+YD H D R S + GD RFIE +N+VFMQ+N++ DG++EPL + ++DTG+GLE
Sbjct: 184 FYD-HGDHIWGGRPGSPEEDGD--RFIEIWNVVFMQFNRQADGTMEPLPRPSVDTGMGLE 240
Query: 272 RIARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSD 331
RI+ I+Q V +NYE D+ +IKKA+E+ + D +N +L++I DH+R+ +L++D
Sbjct: 241 RISAIMQGVHSNYEIDIFQALIKKAAEIVG-----TTDLSNQSLRVIADHIRSCAFLVAD 295
Query: 332 GVFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDV 391
GV PSN GRGYV+RR+IRRAVR GR LG + F AE A+++ + +++
Sbjct: 296 GVMPSNEGRGYVLRRIIRRAVRHGRKLGAT-------DVFFYKLAAELAVQMK-DVAAEL 347
Query: 392 KAREQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDT 451
A+ + L+ EE +FV+TL+RG LL+ DAL+ ++ +P G+ F LYDT
Sbjct: 348 IAQLPLVERVLRIEEEQFVRTLDRGLLLLE----DALANLGDAKVIP---GEVVFKLYDT 400
Query: 452 FGFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTE 511
+GFP ++T +V E + +D +GF EME QR +++ A ++ ++ ++ L + P
Sbjct: 401 YGFPADLTADVVREREIGIDEEGFKAEMEKQRARAKEA-SSFGVNYNEMLKLDFETP--- 456
Query: 512 FLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQG 571
F GY TL+ + V + + V + G + ++L TPFYAESGGQIGD G L V G
Sbjct: 457 FTGYKTLTERTRVVGIYKGVEEVSGLIAGDEAVIVLEETPFYAESGGQIGDSGTLKVDDG 516
Query: 572 TNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLL 631
+ V D K+ G +HKG + G LE G EVEA+VD RQ ++H+ THLL
Sbjct: 517 ------IFAVTDTLKA-GKAIIHKGYMELGTLEKGAEVEAVVDADRRQAIALNHSVTHLL 569
Query: 632 QAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKV 691
AAL++ +G+ +Q GSLV +R+RFDF+ L + +E L+N I + + T++
Sbjct: 570 HAALRQALGEHVTQKGSLVGAERMRFDFSHFEGLTMATIRRVEELVNNQIRANHEITTQL 629
Query: 692 MALDDAKRAGAIAMFGEKYGEQVKI 716
M L+ AK AGA+A+FGEKY + V++
Sbjct: 630 MDLEAAKSAGAMALFGEKYEDDVRV 654
>gi|256752916|ref|ZP_05493749.1| alanyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
gi|256748196|gb|EEU61267.1| alanyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
Length = 757
Score = 553 bits (1424), Expect = e-154, Method: Compositional matrix adjust.
Identities = 308/675 (45%), Positives = 434/675 (64%), Gaps = 36/675 (5%)
Query: 51 DSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATS 109
+ IR++FL F+ S+GH LPS SL+P+ D ++LL +GM KP F GK R T
Sbjct: 7 NEIREKFLSFFESKGHLRLPSFSLIPKNDKSLLLINSGMAPLKPYFTGKETPPSKRVTTC 66
Query: 110 QRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWIS 169
QRCIRT D+E VG+T+RH TFFEMLGNFSFGDYFKKEAI WAWEF T GLP NRLW+S
Sbjct: 67 QRCIRTPDIERVGKTARHGTFFEMLGNFSFGDYFKKEAIPWAWEFVTEVLGLPVNRLWVS 126
Query: 170 VYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSDV 229
+YE+DDEAFEIWNK VG+P E I RMG +DNFW G TGPCGP SEIY+D ++GC
Sbjct: 127 IYEEDDEAFEIWNKIVGLPPERIVRMGKEDNFWEIG-TGPCGPSSEIYFDRGEEKGCGKP 185
Query: 230 DLG---DDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYET 286
G D RFIEF+NLVF Q+NK + G+ L NIDTG+GLERIA I+Q V + ++
Sbjct: 186 TCGVGCDCDRFIEFWNLVFTQFNKDEQGNYHRLPNPNIDTGMGLERIATIMQGVDSIFDV 245
Query: 287 DLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRR 346
D+I I S++A V Y + ++ +++L++I DH+R I +++SDG+ PSN GRGYV+RR
Sbjct: 246 DVIRGITNFVSQIAEVEYGKDAEK-DVSLRVITDHIRGITFMISDGILPSNEGRGYVLRR 304
Query: 347 LIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREE 406
L+RRA R G+LLGI FL + + +E ++ R+ I +K EE
Sbjct: 305 LLRRAARHGKLLGIN--------DTFLYRVVDSVVENYGEAYPEIIDRKDYIKRIVKLEE 356
Query: 407 LRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEH 466
RF +T+++G + L D ++ + G L G AF LYDT+GFP+++TKE+ +E
Sbjct: 357 ERFKETIDQGLTI----LQDYINELKVQGKTV-LEGSKAFKLYDTYGFPLDLTKEILQEA 411
Query: 467 GVSVDMKGFDIEMENQR---RQSQAAHNAVKLSVDDSADLAEKIPD--TEFLGYDTLSAK 521
G++VD +G+ E+E QR R S+ N++ D+ + D T+F+GYDT +
Sbjct: 412 GITVDEEGYTKELEKQRIRARSSRKEDNSLW-----EQDIYSTLGDIKTKFVGYDTYESN 466
Query: 522 AIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEV 581
+ V +++ + + V + G DV ++L+ TPFYAESGGQIGD G L + +++V
Sbjct: 467 SKVLAIVKDEELVEEAEAGDDVSIILDVTPFYAESGGQIGDNGIL------ENENVLIKV 520
Query: 582 KDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQ 641
KD KK +G F+H GTI G++ V EV+A +D R+ A +HTATHLL ALK+++G
Sbjct: 521 KDCKK-VGDRFIHIGTIERGLISVRDEVKAQIDVVSRRNAARNHTATHLLHKALKEILGD 579
Query: 642 ETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAG 701
QAGSLVA DRLRFDF+ ++ + EL++IE +N I + + + D+A + G
Sbjct: 580 HVHQAGSLVADDRLRFDFSHYQAVTKEELKQIENRVNEKIYQSLNVHIEEKTYDEAVKEG 639
Query: 702 AIAMFGEKYGEQVKI 716
A+A+F EKYG++V++
Sbjct: 640 AVALFTEKYGDKVRV 654
>gi|402815554|ref|ZP_10865146.1| alanine--tRNA ligase AlaS [Paenibacillus alvei DSM 29]
gi|402506594|gb|EJW17117.1| alanine--tRNA ligase AlaS [Paenibacillus alvei DSM 29]
Length = 878
Score = 553 bits (1424), Expect = e-154, Method: Compositional matrix adjust.
Identities = 300/675 (44%), Positives = 423/675 (62%), Gaps = 36/675 (5%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+++L F+ S+GH + PSASLVP DP++L AGM KP F G+V + PR A SQ+
Sbjct: 6 IREKWLKFFESKGHHIEPSASLVPHNDPSLLWINAGMAPLKPYFDGRVKPENPRIANSQK 65
Query: 112 CIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANRLWIS 169
CIRTND+ENVG+T RHHTFFEMLGNFS GDYFK+EAI WAWEF T + G NRL+++
Sbjct: 66 CIRTNDIENVGKTRRHHTFFEMLGNFSIGDYFKEEAITWAWEFLTSKEWIGFDPNRLYVT 125
Query: 170 VYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSDV 229
V+ +D+EA+++WN+++G+P +HI + G DDNFW+ G GPCGPC+EI+YD G +
Sbjct: 126 VHNEDEEAYKLWNEKIGLPADHIVKTG-DDNFWDIG-EGPCGPCTEIFYDRGEKYGTLEE 183
Query: 230 D-----LGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNY 284
D G++ R++E +N VF QYN DGS PL KNIDTG GLER A ILQ V +N+
Sbjct: 184 DPECYPSGENERYLEVWNNVFSQYNHNKDGSYTPLPNKNIDTGAGLERFASILQDVDSNF 243
Query: 285 ETDLIFPIIKKASELANVSYAQSNDRTNLN--LKIIGDHLRAIVYLLSDGVFPSNIGRGY 342
+TDL PII+ +A V Y N+R + LK+I DH+R + + + DGV PSN GRGY
Sbjct: 244 DTDLFQPIIQATCRIAGVKY---NERPEFDVALKVIADHVRTVTFAVGDGVLPSNEGRGY 300
Query: 343 VVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIE-LSTHIDSDVKAREQRILEE 401
V+RRL+RRAVR G++LGI + F+ + + E + H V+ RE I +
Sbjct: 301 VIRRLLRRAVRYGKILGI--------DRPFMVELVQTVCEVMGAHYKEIVEKRE-FIEKV 351
Query: 402 LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKE 461
+K EE RF +TL G +L+ + + A R ++ GQ+AF LYDT+GFP ++T++
Sbjct: 352 IKNEEERFHETLVEGLAILESLASAAKQEGR-----TQIGGQEAFKLYDTYGFPFDLTED 406
Query: 462 VAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTLSAK 521
A EHG++VD +GFD M+ QR +++AA LA+ +EF+GY+ L +
Sbjct: 407 YASEHGLTVDREGFDQAMQEQRDRARAARQDTGSMKVQGGPLADFTTKSEFVGYNELVTE 466
Query: 522 AIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEV 581
+ V +++V + + +V+L+RTPFYAESGGQ+ D G L +V
Sbjct: 467 SSVLAIIVGDNMAEEAQADTTCQVVLDRTPFYAESGGQVSDSGLLTAAGFK------AKV 520
Query: 582 KDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQ 641
+DV K+ V + EG L VG +V+A VD +R+ +HTATHLL ALK V+G+
Sbjct: 521 QDVVKAPHGQHVAVVRVEEGSLRVGMKVQAAVDRAIREDIIKNHTATHLLHKALKLVLGE 580
Query: 642 ETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAG 701
+QAGSLV DRLRFDF + + EL +IE +N I L + ++D+AK G
Sbjct: 581 HANQAGSLVQPDRLRFDFTHLGSISEEELTDIEHRVNEQIWKGTQLVIESKSIDEAKEMG 640
Query: 702 AIAMFGEKYGEQVKI 716
A+A+FGEKYG+ V++
Sbjct: 641 AMALFGEKYGDVVRV 655
>gi|417552135|ref|ZP_12203205.1| alanine--tRNA ligase [Acinetobacter baumannii Naval-81]
gi|417561098|ref|ZP_12211977.1| alanine--tRNA ligase [Acinetobacter baumannii OIFC137]
gi|421199245|ref|ZP_15656409.1| alanine--tRNA ligase [Acinetobacter baumannii OIFC109]
gi|421454710|ref|ZP_15904057.1| alanine--tRNA ligase [Acinetobacter baumannii IS-123]
gi|421804675|ref|ZP_16240578.1| alanine--tRNA ligase [Acinetobacter baumannii WC-A-694]
gi|395523680|gb|EJG11769.1| alanine--tRNA ligase [Acinetobacter baumannii OIFC137]
gi|395565212|gb|EJG26860.1| alanine--tRNA ligase [Acinetobacter baumannii OIFC109]
gi|400212500|gb|EJO43459.1| alanine--tRNA ligase [Acinetobacter baumannii IS-123]
gi|400392394|gb|EJP59440.1| alanine--tRNA ligase [Acinetobacter baumannii Naval-81]
gi|410410692|gb|EKP62584.1| alanine--tRNA ligase [Acinetobacter baumannii WC-A-694]
Length = 885
Score = 553 bits (1424), Expect = e-154, Method: Compositional matrix adjust.
Identities = 300/682 (43%), Positives = 429/682 (62%), Gaps = 48/682 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FL ++ ++GH + S+SLVP DPT+L T AGM QFK FLG R RA TSQ+
Sbjct: 13 IREAFLRYFETQGHTRVASSSLVPANDPTLLFTNAGMNQFKDCFLGLEKRDYVRATTSQK 72
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND++NVG T+RHHTFFEMLGNFSFGDYFK++A+++AWEF T E LP ++
Sbjct: 73 CVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKRDALKFAWEFLTSEQWLALPKDK 132
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
L+++VY DDEA++IWNKE+G+ E I R+G A DNFW G TGPCGPCSEI++
Sbjct: 133 LYVTVYHTDDEAYDIWNKEIGLAPERIIRIGDNKGEKYASDNFWAMGDTGPCGPCSEIFF 192
Query: 219 DF--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARI 276
D H G D RFIE +N VFMQ+N+ DG L PL ++DTG+GLERI+ +
Sbjct: 193 DHGEHIWGGLPGSPEEDGDRFIEIWNNVFMQFNRTADGVLHPLPAPSVDTGMGLERISAV 252
Query: 277 LQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPS 336
LQ V +NY+ DL ++K A+ + + D +L+++ DH R+ +L++DGV PS
Sbjct: 253 LQHVNSNYDIDLFQHLLKAAANIIGIE-----DEGQPSLRVVADHARSCCFLIADGVNPS 307
Query: 337 NIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQ 396
N GRGYV+RR+IRRAVR G LG G F + + IE+ +++AR +
Sbjct: 308 NEGRGYVLRRIIRRAVRHGNKLGATG--------TFFYKMLQPLIEVMGQAYPELEARRE 359
Query: 397 RILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPV 456
I L REE +F +TLE+G KLL+ LA +T + G F LYDT+GFP
Sbjct: 360 VIEATLIREEEQFAKTLEQGLKLLEGELAQLKDKT--------IPGATVFKLYDTYGFPT 411
Query: 457 EITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYD 516
++T ++A E G +D GF+IEM QR Q A +A K +VD + ++ + +T+F GY
Sbjct: 412 DLTADIARERGFIIDEAGFEIEMAAQR---QRARDAGKFAVDYN-NIVKVEGETQFDGYT 467
Query: 517 TLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQT 576
+ + + ++ +G V +VS+G + ++LN+TPFYAESGGQIGD G +T
Sbjct: 468 NTTGQGQIVAIYKDGVQVDEVSEGDEALIVLNQTPFYAESGGQIGDTGIF------KNET 521
Query: 577 AVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALK 636
+ EV+D KKS G FVH+G + G L+ + VEAIV +R+ +H+ATHLL AAL+
Sbjct: 522 GIFEVQDTKKS-GGAFVHQGIVTVGNLKTSQNVEAIVKADIREATARNHSATHLLHAALR 580
Query: 637 KVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDD 696
+++G Q GSLVA D LRFDF +P+ +L+++ERL+N I + T+++ ++
Sbjct: 581 QILGSHVQQKGSLVASDILRFDFANDQPVSFEQLQQVERLVNAEIIANTAVTTELLDIET 640
Query: 697 AKRAGAIAMFGEKYGEQVKISS 718
AK GA+ +FGEKYG++V++ S
Sbjct: 641 AKAKGAMMLFGEKYGDEVRVLS 662
>gi|417545168|ref|ZP_12196254.1| alanine--tRNA ligase [Acinetobacter baumannii OIFC032]
gi|421665260|ref|ZP_16105382.1| alanine--tRNA ligase [Acinetobacter baumannii OIFC087]
gi|421672475|ref|ZP_16112431.1| alanine--tRNA ligase [Acinetobacter baumannii OIFC099]
gi|400383056|gb|EJP41734.1| alanine--tRNA ligase [Acinetobacter baumannii OIFC032]
gi|410379106|gb|EKP31713.1| alanine--tRNA ligase [Acinetobacter baumannii OIFC099]
gi|410390724|gb|EKP43106.1| alanine--tRNA ligase [Acinetobacter baumannii OIFC087]
Length = 883
Score = 552 bits (1423), Expect = e-154, Method: Compositional matrix adjust.
Identities = 299/682 (43%), Positives = 429/682 (62%), Gaps = 48/682 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FL ++ ++GH + S+SLVP DPT+L T AGM QFK FLG R RA TSQ+
Sbjct: 11 IREAFLRYFETQGHTRVASSSLVPANDPTLLFTNAGMNQFKDCFLGLEKRDYVRATTSQK 70
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND++NVG T+RHHTFFEMLGNFSFGDYFK++A+++AWEF T E LP ++
Sbjct: 71 CVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKRDALKFAWEFLTSEQWLALPKDK 130
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
L+++VY DDEA++IWNKE+G+ E I R+G A DNFW G TGPCGPCSEI++
Sbjct: 131 LYVTVYHTDDEAYDIWNKEIGLAPERIIRIGDNKGEKYASDNFWAMGDTGPCGPCSEIFF 190
Query: 219 DF--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARI 276
D H G D RFIE +N VFMQ+N+ DG L PL ++DTG+GLERI+ +
Sbjct: 191 DHGEHIWGGLPGSPEEDGDRFIEIWNNVFMQFNRTADGVLHPLPAPSVDTGMGLERISAV 250
Query: 277 LQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPS 336
LQ V +NY+ DL ++K A+ + + D +L+++ DH R+ +L++DGV PS
Sbjct: 251 LQHVNSNYDIDLFQHLLKAAANIIGIE-----DEGQPSLRVVADHARSCCFLIADGVNPS 305
Query: 337 NIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQ 396
N GRGYV+RR+IRRAVR G LG G F + + IE+ +++AR +
Sbjct: 306 NEGRGYVLRRIIRRAVRHGNKLGATG--------TFFYKMLQPLIEVMGQAYPELEARRE 357
Query: 397 RILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPV 456
I L REE +F +TLE+G KLL+ LA +T + G F LYDT+GFP
Sbjct: 358 VIEATLIREEEQFAKTLEQGLKLLEGELAQLKDKT--------IPGATVFKLYDTYGFPT 409
Query: 457 EITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYD 516
++T ++A E G +D GF++EM QR Q A +A K +VD + ++ + +T+F GY
Sbjct: 410 DLTADIARERGFIIDEAGFEVEMAAQR---QRARDAGKFAVDYN-NIVKVEGETQFDGYT 465
Query: 517 TLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQT 576
+ + + ++ +G V +VS+G + ++LN+TPFYAESGGQIGD G +T
Sbjct: 466 NTTGQGQIVAIYKDGVQVDEVSEGDEALIVLNQTPFYAESGGQIGDTGIF------KNET 519
Query: 577 AVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALK 636
+ EV+D KKS G FVH+G + G L+ + VEAIV +R+ +H+ATHLL AAL+
Sbjct: 520 GIFEVQDTKKS-GGAFVHQGIVTVGNLKTSQNVEAIVKANIREATARNHSATHLLHAALR 578
Query: 637 KVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDD 696
+++G Q GSLVA D LRFDF +P+ +L+++ERL+N I + T+++ ++
Sbjct: 579 QILGSHVQQKGSLVASDILRFDFANDQPVSFEQLQQVERLVNAEIIANTAVTTELLDIET 638
Query: 697 AKRAGAIAMFGEKYGEQVKISS 718
AK GA+ +FGEKYG++V++ S
Sbjct: 639 AKAKGAMMLFGEKYGDEVRVLS 660
>gi|421621484|ref|ZP_16062403.1| alanine--tRNA ligase [Acinetobacter baumannii OIFC074]
gi|421798169|ref|ZP_16234197.1| alanine--tRNA ligase [Acinetobacter baumannii Naval-21]
gi|408697904|gb|EKL43406.1| alanine--tRNA ligase [Acinetobacter baumannii OIFC074]
gi|410395072|gb|EKP47387.1| alanine--tRNA ligase [Acinetobacter baumannii Naval-21]
Length = 885
Score = 552 bits (1423), Expect = e-154, Method: Compositional matrix adjust.
Identities = 299/682 (43%), Positives = 429/682 (62%), Gaps = 48/682 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FL ++ ++GH + S+SLVP DPT+L T AGM QFK FLG R RA TSQ+
Sbjct: 13 IREAFLRYFETQGHTRVASSSLVPANDPTLLFTNAGMNQFKDCFLGLEKRDYVRATTSQK 72
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND++NVG T+RHHTFFEMLGNFSFGDYFK++A+++AWEF T E LP ++
Sbjct: 73 CVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKRDALKFAWEFLTSEQWLALPKDK 132
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
L+++VY DDEA++IWNKE+G+ E I R+G A DNFW G TGPCGPCSEI++
Sbjct: 133 LYVTVYHTDDEAYDIWNKEIGLAPERIIRIGDNKGEKYASDNFWAMGDTGPCGPCSEIFF 192
Query: 219 DF--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARI 276
D H G D RFIE +N VFMQ+N+ DG L PL ++DTG+GLERI+ +
Sbjct: 193 DHGEHIWGGLPGSPEEDGDRFIEIWNNVFMQFNRTADGVLHPLPAPSVDTGMGLERISAV 252
Query: 277 LQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPS 336
LQ V +NY+ DL ++K A+ + + D +L+++ DH R+ +L++DGV PS
Sbjct: 253 LQHVNSNYDIDLFQHLLKAAANIIGIE-----DEGQPSLRVVADHARSCCFLIADGVNPS 307
Query: 337 NIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQ 396
N GRGYV+RR+IRRAVR G LG G F + + IE+ +++AR +
Sbjct: 308 NEGRGYVLRRIIRRAVRHGNKLGATG--------TFFYKMLQPLIEVMGQAYPELEARRE 359
Query: 397 RILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPV 456
I L REE +F +TLE+G KLL+ LA +T + G F LYDT+GFP
Sbjct: 360 VIEATLIREEEQFAKTLEQGLKLLESELAQLKDKT--------IPGATVFKLYDTYGFPT 411
Query: 457 EITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYD 516
++T ++A E G +D GF++EM QR Q A +A K +VD + ++ + +T+F GY
Sbjct: 412 DLTADIARERGFIIDEAGFEVEMAAQR---QRARDAGKFAVDYN-NIVKVEGETQFDGYT 467
Query: 517 TLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQT 576
+ + + ++ +G V +VS+G + ++LN+TPFYAESGGQIGD G +T
Sbjct: 468 NTTGQGQIVAIYKDGVQVDEVSEGDEALIVLNQTPFYAESGGQIGDTGIF------KNET 521
Query: 577 AVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALK 636
+ EV+D KKS G FVH+G + G L+ + VEAIV +R+ +H+ATHLL AAL+
Sbjct: 522 GIFEVQDTKKS-GGAFVHQGIVTVGNLKTSQNVEAIVKADIREATARNHSATHLLHAALR 580
Query: 637 KVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDD 696
+++G Q GSLVA D LRFDF +P+ +L+++ERL+N I + T+++ ++
Sbjct: 581 QILGSHVQQKGSLVASDILRFDFANDQPVSFEQLQQVERLVNAEIIANTAVTTELLDIET 640
Query: 697 AKRAGAIAMFGEKYGEQVKISS 718
AK GA+ +FGEKYG++V++ S
Sbjct: 641 AKAKGAMMLFGEKYGDEVRVLS 662
>gi|260557541|ref|ZP_05829756.1| alanyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606 = CIP
70.34]
gi|260409167|gb|EEX02470.1| alanyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606 = CIP
70.34]
Length = 883
Score = 552 bits (1423), Expect = e-154, Method: Compositional matrix adjust.
Identities = 299/682 (43%), Positives = 429/682 (62%), Gaps = 48/682 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FL ++ ++GH + S+SLVP DPT+L T AGM QFK FLG R RA TSQ+
Sbjct: 11 IREAFLRYFETQGHTRVASSSLVPANDPTLLFTNAGMNQFKDCFLGLEKRDYVRATTSQK 70
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND++NVG T+RHHTFFEMLGNFSFGDYFK++A+++AWEF T E LP ++
Sbjct: 71 CVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKRDALKFAWEFLTSEQWLALPKDK 130
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
L+++VY DDEA++IWNKE+G+ E I R+G A DNFW G TGPCGPCSEI++
Sbjct: 131 LYVTVYHTDDEAYDIWNKEIGLAPERIIRIGDNKGEKYASDNFWAMGDTGPCGPCSEIFF 190
Query: 219 DF--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARI 276
D H G D RFIE +N VFMQ+N+ DG L PL ++DTG+GLERI+ +
Sbjct: 191 DHGEHIWGGLPGSPEEDGDRFIEIWNNVFMQFNRTADGVLHPLPAPSVDTGMGLERISAV 250
Query: 277 LQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPS 336
LQ V +NY+ DL ++K A+ + + D +L+++ DH R+ +L++DGV PS
Sbjct: 251 LQHVNSNYDIDLFQHLLKAAANIIGIE-----DEGQPSLRVVADHARSCCFLIADGVNPS 305
Query: 337 NIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQ 396
N GRGYV+RR+IRRAVR G LG G F + + IE+ +++AR +
Sbjct: 306 NEGRGYVLRRIIRRAVRHGNKLGATG--------TFFYKMLQPLIEVMGQAYPELEARRE 357
Query: 397 RILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPV 456
I L REE +F +TLE+G KLL+ LA +T + G F LYDT+GFP
Sbjct: 358 VIEATLIREEEQFAKTLEQGLKLLEGELAQLKDKT--------IPGATVFKLYDTYGFPT 409
Query: 457 EITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYD 516
++T ++A E G +D GF++EM QR Q A +A K +VD + ++ + +T+F GY
Sbjct: 410 DLTADIARERGFIIDEAGFEVEMAAQR---QRARDAGKFAVDYN-NIVKVEGETQFDGYT 465
Query: 517 TLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQT 576
+ + + ++ +G V +VS+G + ++LN+TPFYAESGGQIGD G +T
Sbjct: 466 NTTGQGQIVAIYKDGVQVDEVSEGDEALIVLNQTPFYAESGGQIGDTGIF------KNET 519
Query: 577 AVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALK 636
+ EV+D KKS G FVH+G + G L+ + VEAIV +R+ +H+ATHLL AAL+
Sbjct: 520 GIFEVQDTKKS-GGAFVHQGIVTVGNLKTSQNVEAIVKADIREATARNHSATHLLHAALR 578
Query: 637 KVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDD 696
+++G Q GSLVA D LRFDF +P+ +L+++ERL+N I + T+++ ++
Sbjct: 579 QILGSHVQQKGSLVASDILRFDFANDQPVSFEQLQQVERLVNAEIIANTAVTTELLDIET 638
Query: 697 AKRAGAIAMFGEKYGEQVKISS 718
AK GA+ +FGEKYG++V++ S
Sbjct: 639 AKAKGAMMLFGEKYGDEVRVLS 660
>gi|295695750|ref|YP_003588988.1| alanyl-tRNA synthetase [Kyrpidia tusciae DSM 2912]
gi|295411352|gb|ADG05844.1| alanyl-tRNA synthetase [Kyrpidia tusciae DSM 2912]
Length = 878
Score = 552 bits (1423), Expect = e-154, Method: Compositional matrix adjust.
Identities = 311/671 (46%), Positives = 435/671 (64%), Gaps = 27/671 (4%)
Query: 50 GDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
G IRK+FL+F+AS+ H V PSASLVP +DP++L AGM KP F G+ PR A+
Sbjct: 3 GAEIRKKFLEFFASKDHDVYPSASLVPVDDPSLLWINAGMAPLKPFFDGRKVPPNPRIAS 62
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
SQ+CIRTND+ENVG+T+RH TFFEMLGNFS GDYFKKEAI WAWEF T GL RL +
Sbjct: 63 SQKCIRTNDIENVGKTARHQTFFEMLGNFSIGDYFKKEAIDWAWEFLTEHMGLDPERLSV 122
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCS- 227
+++ +DDEA+E+W++ +GVP I RM +DNFW G GP GPCSEI+YD +RGC
Sbjct: 123 TIHPEDDEAYELWHRRIGVPAHRIFRM--EDNFWEIG-EGPSGPCSEIFYDRGENRGCGR 179
Query: 228 -DVDLGDDT-RFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYE 285
+ ++G + RF+E +NLVF Q+N DG+ PL +KNIDTG+GLER+A ++Q V +N++
Sbjct: 180 PECNVGCECDRFLEIWNLVFTQFNHNPDGTYTPLPKKNIDTGMGLERMASVMQDVDSNFD 239
Query: 286 TDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVR 345
TDL PII+ A+E A V Y Q + ++ LK+I DH+R V+ + DGV P N GR Y++R
Sbjct: 240 TDLFRPIIEAAAEAAGVQYGQEK-QWDVALKVIADHIRTAVFAVGDGVLPGNEGRSYIIR 298
Query: 346 RLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKRE 405
RL+RRAVR GR LG + FL + E+ ++ + I+ +K E
Sbjct: 299 RLLRRAVRYGRNLG--------FDRPFLYRLVPVVGEVMGEAYPEIVEKGDFIVRAVKAE 350
Query: 406 ELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEE 465
E RF++TL GE Q+L D + + R +G L+G+DAF LYDTFGFP+++TKE+A E
Sbjct: 351 EERFLETLAEGE----QVLEDYIEKLRSAGRTT-LAGEDAFRLYDTFGFPIDLTKEIASE 405
Query: 466 HGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTLSAKAIVE 525
G+ VD +GF +E QR +++AA V+ L + + F+GY+ L ++ VE
Sbjct: 406 QGIDVDEEGFAQALEAQRERARAARQDVESMQSKRGVLVDLEAPSRFVGYEVLETQSRVE 465
Query: 526 SLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVK 585
L+V+ + V +VS+G ++LN TPFYAESGGQ+ D G + TA +EV+DV+
Sbjct: 466 VLVVDDRVVERVSEGDQCLIVLNETPFYAESGGQVADRGTI------ETATARLEVEDVQ 519
Query: 586 KSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQ 645
K+ VH+ + G + G V A VD + R+ +HTATHLL AL++V+G+ +Q
Sbjct: 520 KAPRGQHVHRCRVVRGTVTAGEVVRARVDRRYREDIIKNHTATHLLHKALREVLGEHVAQ 579
Query: 646 AGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAM 705
AGSLVA RLRFDF+ + PL ELE +ER++N I + + M LD+AK GA+A+
Sbjct: 580 AGSLVADSRLRFDFSHYGPLAPEELEAVERVVNEEIWRNEPVDIREMPLDEAKAMGAMAL 639
Query: 706 FGEKYGEQVKI 716
FGEKYGE+V++
Sbjct: 640 FGEKYGERVRV 650
>gi|452951622|gb|EME57068.1| alanyl-tRNA ligase [Acinetobacter baumannii MSP4-16]
Length = 878
Score = 552 bits (1423), Expect = e-154, Method: Compositional matrix adjust.
Identities = 299/682 (43%), Positives = 429/682 (62%), Gaps = 48/682 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FL ++ ++GH + S+SLVP DPT+L T AGM QFK FLG R RA TSQ+
Sbjct: 6 IREAFLRYFETQGHTRVASSSLVPANDPTLLFTNAGMNQFKDCFLGLEKRDYVRATTSQK 65
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND++NVG T+RHHTFFEMLGNFSFGDYFK++A+++AWEF T E LP ++
Sbjct: 66 CVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKRDALKFAWEFLTSEQWLALPKDK 125
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
L+++VY DDEA++IWNKE+G+ E I R+G A DNFW G TGPCGPCSEI++
Sbjct: 126 LYVTVYHTDDEAYDIWNKEIGLAPERIIRIGDNKGEKYASDNFWAMGDTGPCGPCSEIFF 185
Query: 219 DF--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARI 276
D H G D RFIE +N VFMQ+N+ DG L PL ++DTG+GLERI+ +
Sbjct: 186 DHGEHIWGGLPGSPEEDGDRFIEIWNNVFMQFNRTADGVLHPLPAPSVDTGMGLERISAV 245
Query: 277 LQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPS 336
LQ V +NY+ DL ++K A+ + + D +L+++ DH R+ +L++DGV PS
Sbjct: 246 LQHVNSNYDIDLFQHLLKAAANIIGIE-----DEGQPSLRVVADHARSCCFLIADGVNPS 300
Query: 337 NIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQ 396
N GRGYV+RR+IRRAVR G LG G F + + IE+ +++AR +
Sbjct: 301 NEGRGYVLRRIIRRAVRHGNKLGATG--------TFFYKMLQPLIEVMGQAYPELEARRE 352
Query: 397 RILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPV 456
I L REE +F +TLE+G KLL+ LA +T + G F LYDT+GFP
Sbjct: 353 VIEATLIREEEQFAKTLEQGLKLLEGELAQLKDKT--------IPGATVFKLYDTYGFPT 404
Query: 457 EITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYD 516
++T ++A E G +D GF++EM QR Q A +A K +VD + ++ + +T+F GY
Sbjct: 405 DLTADIARERGFIIDEAGFEVEMAAQR---QRARDAGKFAVDYN-NIVKVEGETQFDGYT 460
Query: 517 TLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQT 576
+ + + ++ +G V +VS+G + ++LN+TPFYAESGGQIGD G +T
Sbjct: 461 NTTGQGQIVAIYKDGVQVDEVSEGDEALIVLNQTPFYAESGGQIGDTGIF------KNET 514
Query: 577 AVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALK 636
+ EV+D KKS G FVH+G + G L+ + VEAIV +R+ +H+ATHLL AAL+
Sbjct: 515 GIFEVQDTKKS-GGAFVHQGIVTVGNLKTSQNVEAIVKADIREATARNHSATHLLHAALR 573
Query: 637 KVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDD 696
+++G Q GSLVA D LRFDF +P+ +L+++ERL+N I + T+++ ++
Sbjct: 574 QILGSHVQQKGSLVASDILRFDFANDQPVSFEQLQQVERLVNAEIIANTAVTTELLDIET 633
Query: 697 AKRAGAIAMFGEKYGEQVKISS 718
AK GA+ +FGEKYG++V++ S
Sbjct: 634 AKAKGAMMLFGEKYGDEVRVLS 655
>gi|169796616|ref|YP_001714409.1| alanyl-tRNA synthetase [Acinetobacter baumannii AYE]
gi|332853556|ref|ZP_08434820.1| alanine--tRNA ligase [Acinetobacter baumannii 6013150]
gi|332868421|ref|ZP_08438152.1| alanine--tRNA ligase [Acinetobacter baumannii 6013113]
gi|332875050|ref|ZP_08442889.1| alanine--tRNA ligase [Acinetobacter baumannii 6014059]
gi|387124562|ref|YP_006290444.1| alanine--tRNA ligase [Acinetobacter baumannii MDR-TJ]
gi|403675017|ref|ZP_10937218.1| alanyl-tRNA ligase [Acinetobacter sp. NCTC 10304]
gi|407932211|ref|YP_006847854.1| alanine--tRNA ligase [Acinetobacter baumannii TYTH-1]
gi|417869404|ref|ZP_12514391.1| alanyl-tRNA synthetase [Acinetobacter baumannii ABNIH1]
gi|417872854|ref|ZP_12517741.1| alanyl-tRNA synthetase [Acinetobacter baumannii ABNIH2]
gi|417879024|ref|ZP_12523611.1| alanyl-tRNA synthetase [Acinetobacter baumannii ABNIH3]
gi|417883720|ref|ZP_12527944.1| alanyl-tRNA synthetase [Acinetobacter baumannii ABNIH4]
gi|421202035|ref|ZP_15659188.1| alanyl-tRNA synthetase [Acinetobacter baumannii AC12]
gi|421536928|ref|ZP_15983148.1| alanyl-tRNA synthetase [Acinetobacter baumannii AC30]
gi|421703010|ref|ZP_16142479.1| alanyl-tRNA ligase [Acinetobacter baumannii ZWS1122]
gi|421706730|ref|ZP_16146135.1| alanyl-tRNA ligase [Acinetobacter baumannii ZWS1219]
gi|424052993|ref|ZP_17790525.1| alanyl-tRNA synthetase [Acinetobacter baumannii Ab11111]
gi|424060523|ref|ZP_17798014.1| alanyl-tRNA synthetase [Acinetobacter baumannii Ab33333]
gi|424064480|ref|ZP_17801965.1| alanyl-tRNA synthetase [Acinetobacter baumannii Ab44444]
gi|205829964|sp|B0VAI3.1|SYA_ACIBY RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|205830054|sp|A3M3W2.2|SYA_ACIBT RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|205830056|sp|B2HWK7.2|SYA_ACIBC RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|169149543|emb|CAM87432.1| alanyl-tRNA synthetase [Acinetobacter baumannii AYE]
gi|193076886|gb|ABO11606.2| alanyl-tRNA synthetase [Acinetobacter baumannii ATCC 17978]
gi|332728589|gb|EGJ59961.1| alanine--tRNA ligase [Acinetobacter baumannii 6013150]
gi|332733420|gb|EGJ64603.1| alanine--tRNA ligase [Acinetobacter baumannii 6013113]
gi|332736750|gb|EGJ67738.1| alanine--tRNA ligase [Acinetobacter baumannii 6014059]
gi|342230407|gb|EGT95246.1| alanyl-tRNA synthetase [Acinetobacter baumannii ABNIH3]
gi|342230529|gb|EGT95362.1| alanyl-tRNA synthetase [Acinetobacter baumannii ABNIH1]
gi|342232977|gb|EGT97737.1| alanyl-tRNA synthetase [Acinetobacter baumannii ABNIH2]
gi|342235375|gb|EGT99979.1| alanyl-tRNA synthetase [Acinetobacter baumannii ABNIH4]
gi|385879054|gb|AFI96149.1| alanine--tRNA ligase [Acinetobacter baumannii MDR-TJ]
gi|398328468|gb|EJN44593.1| alanyl-tRNA synthetase [Acinetobacter baumannii AC12]
gi|404668475|gb|EKB36384.1| alanyl-tRNA synthetase [Acinetobacter baumannii Ab33333]
gi|404670792|gb|EKB38668.1| alanyl-tRNA synthetase [Acinetobacter baumannii Ab11111]
gi|404673216|gb|EKB41015.1| alanyl-tRNA synthetase [Acinetobacter baumannii Ab44444]
gi|407193134|gb|EKE64304.1| alanyl-tRNA ligase [Acinetobacter baumannii ZWS1122]
gi|407193399|gb|EKE64563.1| alanyl-tRNA ligase [Acinetobacter baumannii ZWS1219]
gi|407900792|gb|AFU37623.1| alanine--tRNA ligase [Acinetobacter baumannii TYTH-1]
gi|409985155|gb|EKO41388.1| alanyl-tRNA synthetase [Acinetobacter baumannii AC30]
Length = 878
Score = 552 bits (1422), Expect = e-154, Method: Compositional matrix adjust.
Identities = 299/682 (43%), Positives = 429/682 (62%), Gaps = 48/682 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FL ++ ++GH + S+SLVP DPT+L T AGM QFK FLG R RA TSQ+
Sbjct: 6 IREAFLRYFETQGHTRVASSSLVPANDPTLLFTNAGMNQFKDCFLGLEKRDYVRATTSQK 65
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND++NVG T+RHHTFFEMLGNFSFGDYFK++A+++AWEF T E LP ++
Sbjct: 66 CVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKRDALKFAWEFLTSEQWLALPKDK 125
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
L+++VY DDEA++IWNKE+G+ E I R+G A DNFW G TGPCGPCSEI++
Sbjct: 126 LYVTVYHTDDEAYDIWNKEIGLAPERIIRIGDNKGEKYASDNFWAMGDTGPCGPCSEIFF 185
Query: 219 DF--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARI 276
D H G D RFIE +N VFMQ+N+ DG L PL ++DTG+GLERI+ +
Sbjct: 186 DHGEHIWGGLPGSPEEDGDRFIEIWNNVFMQFNRTADGVLHPLPAPSVDTGMGLERISAV 245
Query: 277 LQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPS 336
LQ V +NY+ DL ++K A+ + + D +L+++ DH R+ +L++DGV PS
Sbjct: 246 LQHVNSNYDIDLFQHLLKAAANIIGIE-----DEGQPSLRVVADHARSCCFLIADGVNPS 300
Query: 337 NIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQ 396
N GRGYV+RR+IRRAVR G LG G F + + IE+ +++AR +
Sbjct: 301 NEGRGYVLRRIIRRAVRHGNKLGATG--------TFFYKMLQPLIEVMGQAYPELEARRE 352
Query: 397 RILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPV 456
I L REE +F +TLE+G KLL+ LA +T + G F LYDT+GFP
Sbjct: 353 VIEATLIREEEQFAKTLEQGLKLLEGELAQLKDKT--------IPGATVFKLYDTYGFPT 404
Query: 457 EITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYD 516
++T ++A E G +D GF++EM QR Q A +A K +VD + ++ + +T+F GY
Sbjct: 405 DLTADIARERGFIIDEAGFEVEMAAQR---QRARDAGKFAVDYN-NIVKVEGETQFDGYT 460
Query: 517 TLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQT 576
+ + + ++ +G V +VS+G + ++LN+TPFYAESGGQIGD G +T
Sbjct: 461 NTTGQGQIVAIYKDGVQVDEVSEGDEALIVLNQTPFYAESGGQIGDTGIF------KNET 514
Query: 577 AVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALK 636
+ EV+D KKS G FVH+G + G L+ + VEAIV +R+ +H+ATHLL AAL+
Sbjct: 515 GIFEVQDTKKS-GGAFVHQGIVTVGNLKTSQNVEAIVKADIREATARNHSATHLLHAALR 573
Query: 637 KVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDD 696
+++G Q GSLVA D LRFDF +P+ +L+++ERL+N I + T+++ ++
Sbjct: 574 QILGSHVQQKGSLVASDILRFDFANDQPVSFEQLQQVERLVNAEIIANTAVTTELLDIET 633
Query: 697 AKRAGAIAMFGEKYGEQVKISS 718
AK GA+ +FGEKYG++V++ S
Sbjct: 634 AKAKGAMMLFGEKYGDEVRVLS 655
>gi|167623167|ref|YP_001673461.1| alanyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4]
gi|205830204|sp|B0TK15.1|SYA_SHEHH RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|167353189|gb|ABZ75802.1| alanyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4]
Length = 874
Score = 552 bits (1422), Expect = e-154, Method: Compositional matrix adjust.
Identities = 297/681 (43%), Positives = 426/681 (62%), Gaps = 50/681 (7%)
Query: 52 SIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQ 110
++R FL+++ + GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA +SQ
Sbjct: 7 ALRSAFLEYFRTNGHQVVDSSSLVPANDPTLLFTNAGMNQFKDVFLGADKRSYSRATSSQ 66
Query: 111 RCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRL 166
RC+R ND++NVG T+RHHTFFEMLGNFSFGDYFK+EAI +AW F T E LP RL
Sbjct: 67 RCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKEEAIHFAWTFLTEELKLPKERL 126
Query: 167 WISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYYD 219
+++YE DDEAFEIWNK++GV E+I R+G A DNFW G TGPCGPCSEI+YD
Sbjct: 127 CVTIYETDDEAFEIWNKKIGVAAENIIRIGDNKGAAYASDNFWQMGDTGPCGPCSEIFYD 186
Query: 220 FHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARI 276
H D G D RFIE +N+VFMQYN++ DG ++PL + ++DTG+G+ERIA I
Sbjct: 187 -HGDHIWGGRPGTPEEDGDRFIEIWNIVFMQYNRQADGEMKPLPKPSVDTGMGIERIAAI 245
Query: 277 LQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPS 336
+Q V +NYE D+ +IKK + + V+ D N +L++I DH+R+ +L++DGV PS
Sbjct: 246 MQGVHSNYEIDIFQALIKKTAAILGVT-----DLENKSLRVIADHIRSCAFLIADGVMPS 300
Query: 337 NIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQ 396
N GRGYV+RR+IRRAVR G LG +F + IE+ ++ +
Sbjct: 301 NEGRGYVLRRIIRRAVRHGNKLGAT--------ESFFYKLVPTLIEVMGDAAKGLQETQA 352
Query: 397 RILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPV 456
+ + LK EE +F +TLERG +LD L + ++ L G+ AF LYDT+GFPV
Sbjct: 353 IVEKSLKAEEEQFARTLERGLGILDAALNELTTKV--------LDGETAFKLYDTYGFPV 404
Query: 457 EITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPD-TEFLGY 515
++T +V E ++VD GF+ M QR+++QAA D + KI + + F GY
Sbjct: 405 DLTADVCREREITVDEAGFEAAMAEQRKRAQAAGQ-----FDTDYNEGLKIDEQSSFTGY 459
Query: 516 DTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
L+ +A V ++ +G+ ++ G + ++L+ TPFY ESGGQ GD G L + G +
Sbjct: 460 TELNNQATVTAIFKSGEAAETITAGDEAVIVLDNTPFYGESGGQSGDKGVL-IADGI--E 516
Query: 576 TAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAAL 635
V++ + +++G H G + G ++ G+ + A VD KLR R +++H+ THLL AAL
Sbjct: 517 FTVIDTQKYGQAIG----HIGRVVTGEIKAGQSLTANVDKKLRHRTELNHSVTHLLHAAL 572
Query: 636 KKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALD 695
++V+G SQ GSLV +RLRFDF+ + EL+E+E L+N I + L +VM ++
Sbjct: 573 RQVLGAHVSQKGSLVDPERLRFDFSHFEGVKANELKEVEELVNTQIRRNHELTAEVMDIE 632
Query: 696 DAKRAGAIAMFGEKYGEQVKI 716
AK GA+A+FGEKY +V++
Sbjct: 633 TAKEKGAMALFGEKYDSEVRV 653
>gi|395234462|ref|ZP_10412686.1| alanyl-tRNA ligase [Enterobacter sp. Ag1]
gi|394730908|gb|EJF30735.1| alanyl-tRNA ligase [Enterobacter sp. Ag1]
Length = 875
Score = 552 bits (1422), Expect = e-154, Method: Compositional matrix adjust.
Identities = 318/690 (46%), Positives = 433/690 (62%), Gaps = 64/690 (9%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AI +AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAINFAWELLTGENWFALPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVGVP E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYETDDEAYEIWEKEVGVPRERIIRIGDNKGAAFASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++ PL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQIDGTMLPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +I+ +E+ + D +N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFKKLIQSVAEVTGAT-----DLSNKSLRVIADHIRSCAFLIADGVTP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRA+R G +LG K L G + + EL A++
Sbjct: 302 SNENRGYVLRRIIRRAIRHGNMLGAKDTFFYKLVGPLVEVMGSAGEEL---------AKQ 352
Query: 396 QRILEE-LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGF 454
Q ++E+ LK EE +F +TLERG LLD LA T L G+ AF LYDT+GF
Sbjct: 353 QALVEQVLKTEEEQFARTLERGLALLDDELAKLKGDT--------LDGETAFRLYDTYGF 404
Query: 455 PVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQ------AAHNAVKLSVDDSADLAEKIP 508
PV++T +V E + VD GF+ ME QRR+++ A +N++ + VD +
Sbjct: 405 PVDLTADVCRERNIKVDEAGFEAAMEEQRRRARESSGFGADYNSM-IRVDSA-------- 455
Query: 509 DTEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYV 568
+EF GYD+L A V +L V+GK V +++ G D V+LN TPFY ESGGQ+GD G
Sbjct: 456 -SEFKGYDSLDLNAKVTALFVDGKSVDQITAGQDAVVVLNETPFYGESGGQVGDKG---T 511
Query: 569 TQGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTAT 628
+G AV + + +++G H G + GVL+VG VEA VD R R +++H+AT
Sbjct: 512 VKGNGVDFAVGDTQKYGQAIG----HLGKLVSGVLKVGDSVEAKVDEARRARIRLNHSAT 567
Query: 629 HLLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQ 688
HLL AAL++V+G +Q GSLV LRFDF+ + E+ +E ++N I ++
Sbjct: 568 HLLHAALRQVLGTHVAQKGSLVNDKGLRFDFSHFEAMKPAEIRAVEDIVNAQIRRNLPVE 627
Query: 689 TKVMALDDAKRAGAIAMFGEKYGEQVKISS 718
T VM L+ AK GA+A+FGEKY + V++ S
Sbjct: 628 TNVMDLEAAKAKGAMALFGEKYDDHVRVLS 657
>gi|379723660|ref|YP_005315791.1| protein AlaS [Paenibacillus mucilaginosus 3016]
gi|386726409|ref|YP_006192735.1| protein AlaS [Paenibacillus mucilaginosus K02]
gi|378572332|gb|AFC32642.1| AlaS [Paenibacillus mucilaginosus 3016]
gi|384093534|gb|AFH64970.1| protein AlaS [Paenibacillus mucilaginosus K02]
Length = 873
Score = 552 bits (1422), Expect = e-154, Method: Compositional matrix adjust.
Identities = 305/678 (44%), Positives = 424/678 (62%), Gaps = 44/678 (6%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR ++L F+ S+GHK+ PSA LVP DP++L AGM KP F G+V + PR A SQ+
Sbjct: 6 IRSKWLQFFESKGHKIEPSAPLVPHNDPSLLWINAGMAPLKPYFDGRVVPENPRIANSQK 65
Query: 112 CIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANRLWIS 169
CIRTND+ENVG+T RHHTFFEMLGNFS GDYFK+E I WAWEF T G RL ++
Sbjct: 66 CIRTNDIENVGKTRRHHTFFEMLGNFSIGDYFKEEVITWAWEFLTSPEWIGFDPERLSVT 125
Query: 170 VYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRG-CSD 228
VY +D EAF+ WNK++G+P E I ++ +NFW+ G GPCGPC+EI+YD G SD
Sbjct: 126 VYPEDTEAFDYWNKKIGLPAERIYKL--QENFWDIG-EGPCGPCTEIFYDRGDKYGDLSD 182
Query: 229 VDL---GDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYE 285
+ G++ RF+E +NLVF Q+N DGS PL KNIDTG GLER A ILQ V +N++
Sbjct: 183 PECWPGGENERFLEVWNLVFSQFNHNKDGSYTPLPNKNIDTGAGLERFASILQDVDSNFD 242
Query: 286 TDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVR 345
TDL P+I+K ELA V Y + N+ ++ LK+I DH+R + + + DGV PSN GRGYV+R
Sbjct: 243 TDLFQPMIQKTCELAGVKY-KENEEFDVALKVIADHIRTVAFSVGDGVLPSNEGRGYVIR 301
Query: 346 RLIRRAVRTGRLLGIKGDGR-------GNLEGAFLPSIAEKAIELSTHIDSDVKAREQRI 398
RL+RRAVR G++LG+ G++ G + P + EK + I
Sbjct: 302 RLLRRAVRYGKVLGMDKPFLYLLTPIVGDVMGVYYPEVVEK---------------REFI 346
Query: 399 LEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEI 458
+ ++ EE RF +TL G +L +M A R++GS ++SG DAF LYDT+GFP ++
Sbjct: 347 EKVIRTEEERFHETLSDGLAILGEMAEKA----RQAGST-QISGPDAFKLYDTYGFPFDL 401
Query: 459 TKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTL 518
T++ A E G++VD +GFD M+ QR +++AA LA+ +EF+GY L
Sbjct: 402 TEDFAAEKGMTVDREGFDAAMQEQRDRARAARQDSGSMQTQGGPLADFAVKSEFVGYTDL 461
Query: 519 SAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAV 578
A V +++ + V V G +V+L+ TPFYAESGGQ+ D+G Y+T G V
Sbjct: 462 VTPAKVIAVVHENQFVDLVGTGETCQVILDVTPFYAESGGQVSDHG--YITAGDT----V 515
Query: 579 VEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKV 638
++V+DV K+ VH + GVL G V+A V ++R+ +HTATHLL ALK+V
Sbjct: 516 LKVEDVTKAPHGQHVHTVVVEAGVLRKGDSVQATVTQEVREDIIKNHTATHLLHKALKEV 575
Query: 639 IGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAK 698
+G+ +QAGSLVA +RLRFDF+ + EL+EIER +N I + + + +AK
Sbjct: 576 LGEHVNQAGSLVAPERLRFDFSHFGSISAEELQEIERRVNAQIWKTTEVDISLKPIAEAK 635
Query: 699 RAGAIAMFGEKYGEQVKI 716
GA+A+FGEKYG+ V++
Sbjct: 636 AMGAMALFGEKYGDVVRV 653
>gi|421652342|ref|ZP_16092701.1| alanine--tRNA ligase [Acinetobacter baumannii OIFC0162]
gi|425747414|ref|ZP_18865422.1| alanine--tRNA ligase [Acinetobacter baumannii WC-348]
gi|445459110|ref|ZP_21447450.1| alanine--tRNA ligase [Acinetobacter baumannii OIFC047]
gi|408505468|gb|EKK07189.1| alanine--tRNA ligase [Acinetobacter baumannii OIFC0162]
gi|425493988|gb|EKU60210.1| alanine--tRNA ligase [Acinetobacter baumannii WC-348]
gi|444774463|gb|ELW98545.1| alanine--tRNA ligase [Acinetobacter baumannii OIFC047]
Length = 885
Score = 552 bits (1422), Expect = e-154, Method: Compositional matrix adjust.
Identities = 299/682 (43%), Positives = 429/682 (62%), Gaps = 48/682 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FL ++ ++GH + S+SLVP DPT+L T AGM QFK FLG R RA TSQ+
Sbjct: 13 IREAFLRYFETQGHTRVASSSLVPANDPTLLFTNAGMNQFKDCFLGLEKRDYVRATTSQK 72
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND++NVG T+RHHTFFEMLGNFSFGDYFK++A+++AWEF T E LP ++
Sbjct: 73 CVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKRDALKFAWEFLTSEQWLALPKDK 132
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
L+++VY DDEA++IWNKE+G+ E I R+G A DNFW G TGPCGPCSEI++
Sbjct: 133 LYVTVYHTDDEAYDIWNKEIGLAPERIIRIGDNKGEKYASDNFWAMGDTGPCGPCSEIFF 192
Query: 219 DF--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARI 276
D H G D RFIE +N VFMQ+N+ DG L PL ++DTG+GLERI+ +
Sbjct: 193 DHGEHIWGGLPGSPEEDGDRFIEIWNNVFMQFNRTADGVLHPLPAPSVDTGMGLERISAV 252
Query: 277 LQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPS 336
LQ V +NY+ DL ++K A+ + + D +L+++ DH R+ +L++DGV PS
Sbjct: 253 LQHVNSNYDIDLFQHLLKAAANIIGIE-----DEGQPSLRVVADHARSCCFLIADGVNPS 307
Query: 337 NIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQ 396
N GRGYV+RR+IRRAVR G LG G F + + IE+ +++AR +
Sbjct: 308 NEGRGYVLRRIIRRAVRHGNKLGATG--------TFFYKMLQPLIEVMGQAYPELEARRE 359
Query: 397 RILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPV 456
I L REE +F +TLE+G KLL+ LA +T + G F LYDT+GFP
Sbjct: 360 VIEATLIREEEQFAKTLEQGLKLLEGELAQLKDKT--------IPGATVFKLYDTYGFPT 411
Query: 457 EITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYD 516
++T ++A E G +D GF++EM QR Q A +A K +VD + ++ + +T+F GY
Sbjct: 412 DLTADIARERGFIIDEAGFEVEMAAQR---QRARDAGKFAVDYN-NIVKVEGETQFDGYT 467
Query: 517 TLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQT 576
+ + + ++ +G V +VS+G + ++LN+TPFYAESGGQIGD G +T
Sbjct: 468 NTTGQGQIVAIYKDGVQVDEVSEGDEALIVLNQTPFYAESGGQIGDTGIF------KNET 521
Query: 577 AVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALK 636
+ EV+D KKS G FVH+G + G L+ + VEAIV +R+ +H+ATHLL AAL+
Sbjct: 522 GIFEVQDTKKS-GGAFVHQGIVTVGNLKTNQNVEAIVKADIREATARNHSATHLLHAALR 580
Query: 637 KVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDD 696
+++G Q GSLVA D LRFDF +P+ +L+++ERL+N I + T+++ ++
Sbjct: 581 QILGSHVQQKGSLVASDILRFDFANDQPVSFEQLQQVERLVNAEIIANTAVTTELLDIET 640
Query: 697 AKRAGAIAMFGEKYGEQVKISS 718
AK GA+ +FGEKYG++V++ S
Sbjct: 641 AKAKGAMMLFGEKYGDEVRVLS 662
>gi|402833043|ref|ZP_10881665.1| alanine--tRNA ligase [Selenomonas sp. CM52]
gi|402281410|gb|EJU30045.1| alanine--tRNA ligase [Selenomonas sp. CM52]
Length = 874
Score = 552 bits (1422), Expect = e-154, Method: Compositional matrix adjust.
Identities = 303/676 (44%), Positives = 429/676 (63%), Gaps = 32/676 (4%)
Query: 49 SGDSIRKRFLDFYA-SRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRA 106
+G+ +R+ +L F+A +GH LPSASL+P DPT+L+ AGM FKP F GK+ R
Sbjct: 5 TGNELREAYLQFFAEKKGHLRLPSASLIPANDPTLLMIGAGMAPFKPFFTGKMKPPRTRI 64
Query: 107 ATSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRL 166
TSQRC+RT D+ENVGRT+RH T+FEMLGNFSFGDYFKKEAI WAWEF T LP +L
Sbjct: 65 TTSQRCVRTGDIENVGRTARHQTYFEMLGNFSFGDYFKKEAIPWAWEFLTDVLDLPKEKL 124
Query: 167 WISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGC 226
W++VY DDEA IW ++ G P +HI ++ DDNFW G GPCGP SEIY D +RGC
Sbjct: 125 WVTVYPKDDEAAAIWREQPGFPQDHIVKL--DDNFWEIG-PGPCGPDSEIYIDLGEERGC 181
Query: 227 SDVDLG---DDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNN 283
D D R++E +NLVF Q+++ +DG PL+ KNIDTG GLER+A +LQ N
Sbjct: 182 GSPDCAVGCDCDRYLEIWNLVFTQFDRTEDGQYNPLEHKNIDTGCGLERLASVLQNKKTN 241
Query: 284 YETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYV 343
+ETDL+FPII+ AS+++ V Y + N +++LK+I DH R++ ++ DG+ PSN GRGYV
Sbjct: 242 FETDLLFPIIEYASKVSGVVYGE-NAEKDVSLKVIADHARSMAIMIMDGILPSNEGRGYV 300
Query: 344 VRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELK 403
+RR++RRAVR GR+LGI LEGA + ++AE I ++ +++ I + +
Sbjct: 301 LRRILRRAVRHGRILGIHDK---FLEGA-IDAVAE--IYKGAADFEELAEKKEYIKKVIS 354
Query: 404 REELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVA 463
EE RF TL +G +LL+ + D RE V L G+ F LYDT+GFP E+T E+
Sbjct: 355 IEEDRFAATLAQGMELLNGHIEDL---KREGKKV--LPGEIGFKLYDTYGFPWEVTDEIL 409
Query: 464 EEHGVSVDMKGFDIEMENQRRQSQAA-HNAVKLSVDDSADLAEKIPDTEFLGYDTLSAKA 522
E+ + +D F+ ME QR +++AA +++V D + + DT L D + ++
Sbjct: 410 HENEMELDKDSFEKAMEKQRERARAARQENQRVAVPDLSGI-----DTSHLCVDENAKES 464
Query: 523 IVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVK 582
V ++ +G V +++ G + ++L TPFYAE GGQ+GD G L G V+V
Sbjct: 465 TVVAIWKDGGLVDELADGEEAGIILQSTPFYAEGGGQVGDAGLLETEFGR------VQVA 518
Query: 583 DVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQE 642
+ KK H G + EG+L+VG V +D + + +HTATHLLQAALK+V+G +
Sbjct: 519 NAKKLPDGTVYHIGYVEEGMLKVGDHVSIQIDWMKKLSSARNHTATHLLQAALKRVVGDQ 578
Query: 643 TSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGA 702
+QAGSLV +RLRFDF+ P+ +L+E+ERL+N I A ++ M +D AK+ GA
Sbjct: 579 VNQAGSLVMPERLRFDFSNFEPVTALQLQEVERLVNEQILMAKPVEIAQMEIDKAKKLGA 638
Query: 703 IAMFGEKYGEQVKISS 718
+A+FGEKYG+ V++ S
Sbjct: 639 MALFGEKYGDVVRVVS 654
>gi|408533292|emb|CCK31466.1| Alanyl-tRNA synthetase [Streptomyces davawensis JCM 4913]
Length = 890
Score = 552 bits (1422), Expect = e-154, Method: Compositional matrix adjust.
Identities = 296/678 (43%), Positives = 425/678 (62%), Gaps = 33/678 (4%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQRC 112
IR+R+L F+ RGH V+PSASL+ +DPT+LL AGM+ FKP FLG+V RA + Q+C
Sbjct: 6 IRRRWLSFFEERGHTVVPSASLIADDPTLLLVPAGMVPFKPYFLGEVKPPFDRATSVQKC 65
Query: 113 IRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE-----FGLPANRLW 167
+RT D+E VG+T+RH TFF+M GNFSFGDYFK+ AI++AWE T +GL +LW
Sbjct: 66 VRTPDIEEVGKTTRHGTFFQMCGNFSFGDYFKEGAIKYAWELLTSPQDKGGYGLEPEKLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCS 227
I+VY+DDDEA IW++ VGVP E I+R+G DN+W+ G GPCGPCSEI YD P+ G
Sbjct: 126 ITVYKDDDEAERIWHEVVGVPKERIQRLGMKDNYWSMGVPGPCGPCSEINYDRGPEFGVE 185
Query: 228 DVDLGDDTRFIEFYNLVFMQYNK-----KDDGS-LEPLKQKNIDTGLGLERIARILQKVP 281
+D R++E +NLVFMQY + KD+ L L KNIDTGLGLER+A ILQ V
Sbjct: 186 GGPAVNDERYVEIWNLVFMQYERGEGIGKDNFEILGELPSKNIDTGLGLERLAMILQGVQ 245
Query: 282 NNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRG 341
N YE D +IKKA+EL V+Y ++ ++++L+++ DH+R V L+ DGV P N GRG
Sbjct: 246 NMYEIDTSMAVIKKATELTGVAYGDAHG-SDVSLRVVTDHMRTAVMLIGDGVTPGNEGRG 304
Query: 342 YVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEE 401
YV+RR++RRA+R RLLG G +L + + ++ EL T +RI +
Sbjct: 305 YVLRRIMRRAIRNMRLLGATGPVVNDLVDTVIAMMGQQYPELVTD--------RERIEKV 356
Query: 402 LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKE 461
EE F++TL+ G +LD + D T+ +G L+G AFLL+DT+GFP+++T E
Sbjct: 357 ALAEENAFLKTLKAGTNILDTAVGD----TKAAGGTV-LAGDKAFLLHDTWGFPIDLTLE 411
Query: 462 VAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSA---DLAEKIPDTEFLGYDTL 518
+A E G+SVD GF M+ QR +++A A K D ++A+ +TEF+GY
Sbjct: 412 MAAEQGLSVDEDGFRRLMKEQRERAKADAQAKKTGHADMGAYREIADSAGETEFIGYSDT 471
Query: 519 SAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAV 578
++ + +LV+G ++G +VE++L+RTPFYAE GGQIGD G + G AV
Sbjct: 472 EGESTIVGILVDGVSSPAATEGDEVEIVLDRTPFYAEGGGQIGDTGRIKADSG-----AV 526
Query: 579 VEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKV 638
+E++D +K + V+VHKG ++ G + VG + +A +D R+ H+ATHL AL+
Sbjct: 527 IEIRDCQKPVPGVYVHKGVVQVGEVTVGAKAQASIDNFRRKAIARAHSATHLTHQALRDA 586
Query: 639 IGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAK 698
+G +QAGS R RFDF + + ++E+ IN + ++ VM +D+AK
Sbjct: 587 LGPTAAQAGSENQPGRFRFDFGSPSAVPTAVMTDVEQKINEVLARDLDVRADVMGIDEAK 646
Query: 699 RAGAIAMFGEKYGEQVKI 716
+ GAIA FGEKYGE+V++
Sbjct: 647 KQGAIAEFGEKYGERVRV 664
>gi|421674190|ref|ZP_16114125.1| alanine--tRNA ligase [Acinetobacter baumannii OIFC065]
gi|421690676|ref|ZP_16130344.1| alanine--tRNA ligase [Acinetobacter baumannii IS-116]
gi|404564054|gb|EKA69246.1| alanine--tRNA ligase [Acinetobacter baumannii IS-116]
gi|410384951|gb|EKP37449.1| alanine--tRNA ligase [Acinetobacter baumannii OIFC065]
Length = 883
Score = 552 bits (1422), Expect = e-154, Method: Compositional matrix adjust.
Identities = 299/682 (43%), Positives = 429/682 (62%), Gaps = 48/682 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FL ++ ++GH + S+SLVP DPT+L T AGM QFK FLG R RA TSQ+
Sbjct: 11 IREAFLRYFETQGHTRVASSSLVPANDPTLLFTNAGMNQFKDCFLGLEKRDYVRATTSQK 70
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND++NVG T+RHHTFFEMLGNFSFGDYFK++A+++AWEF T E LP ++
Sbjct: 71 CVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKRDALKFAWEFLTSEQWLALPKDK 130
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
L+++VY DDEA++IWNKE+G+ E I R+G A DNFW G TGPCGPCSEI++
Sbjct: 131 LYVTVYHTDDEAYDIWNKEIGLAPERIIRIGDNKGEKYASDNFWAMGDTGPCGPCSEIFF 190
Query: 219 DF--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARI 276
D H G D RFIE +N VFMQ+N+ DG L PL ++DTG+GLERI+ +
Sbjct: 191 DHGEHIWGGLPGSPEEDGDRFIEIWNNVFMQFNRTADGVLHPLPAPSVDTGMGLERISAV 250
Query: 277 LQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPS 336
LQ V +NY+ DL ++K A+ + + D +L+++ DH R+ +L++DGV PS
Sbjct: 251 LQHVNSNYDIDLFQHLLKAAANIIGIE-----DEGQPSLRVVADHARSCCFLIADGVNPS 305
Query: 337 NIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQ 396
N GRGYV+RR+IRRAVR G LG G F + + IE+ +++AR +
Sbjct: 306 NEGRGYVLRRIIRRAVRHGNKLGATG--------TFFYKMLQPLIEVMGQAYPELEARRE 357
Query: 397 RILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPV 456
I L REE +F +TLE+G KLL+ LA +T + G F LYDT+GFP
Sbjct: 358 VIEATLIREEEQFAKTLEQGLKLLEGELAQLKDKT--------IPGATVFKLYDTYGFPT 409
Query: 457 EITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYD 516
++T ++A E G +D GF++EM QR Q A +A K +VD + ++ + +T+F GY
Sbjct: 410 DLTADIARERGFIIDEAGFEVEMAAQR---QRARDAGKFAVDYN-NIVKVEGETQFDGYT 465
Query: 517 TLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQT 576
+ + + ++ +G V +VS+G + ++LN+TPFYAESGGQIGD G +T
Sbjct: 466 NTTGQGQIVAIYKDGVQVDEVSEGDEALIVLNQTPFYAESGGQIGDTGIF------KNET 519
Query: 577 AVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALK 636
+ EV+D KKS G FVH+G + G L+ + VEAIV +R+ +H+ATHLL AAL+
Sbjct: 520 GIFEVQDTKKS-GGAFVHQGIVTVGNLKTSQNVEAIVKADIREATARNHSATHLLHAALR 578
Query: 637 KVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDD 696
+++G Q GSLVA D LRFDF +P+ +L+++ERL+N I + T+++ ++
Sbjct: 579 QILGSHVQQKGSLVASDILRFDFANDQPVSFEQLQQVERLVNAEIIANTAVTTELLDIET 638
Query: 697 AKRAGAIAMFGEKYGEQVKISS 718
AK GA+ +FGEKYG++V++ S
Sbjct: 639 AKAKGAMMLFGEKYGDEVRVLS 660
>gi|414174612|ref|ZP_11429016.1| alanyl-tRNA synthetase [Afipia broomeae ATCC 49717]
gi|410888441|gb|EKS36244.1| alanyl-tRNA synthetase [Afipia broomeae ATCC 49717]
Length = 887
Score = 552 bits (1422), Expect = e-154, Method: Compositional matrix adjust.
Identities = 299/681 (43%), Positives = 431/681 (63%), Gaps = 41/681 (6%)
Query: 51 DSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATS 109
+ IR +L+++A GH+++PS+ LVP DPT++ T AGM+QFK +F G R RA +S
Sbjct: 5 NEIRSAYLNYFAKNGHEIVPSSPLVPRNDPTLMFTNAGMVQFKNVFTGLEKRPYQRATSS 64
Query: 110 QRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANR 165
Q+C+R ND++NVG T+RHHTFFEMLGNFSFGDYFK AI+ AW T E+GLP ++
Sbjct: 65 QKCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKDRAIELAWNLITKEYGLPKDK 124
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDR- 224
L ++VY +DDEAF +W K G+P I R+G DNFW G TGPCGPCSEI++D H D+
Sbjct: 125 LLVTVYSEDDEAFGLWKKIAGLPESKIIRIGTSDNFWQMGDTGPCGPCSEIFFD-HGDKI 183
Query: 225 -----GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQK 279
G ++ D GD RFIE +NLVFMQ+++ G+ L + +IDTG+GLERIA +LQ
Sbjct: 184 WGGPPGSAEED-GD--RFIEIWNLVFMQFDQIAPGNRVALPKPSIDTGMGLERIAAVLQG 240
Query: 280 VPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIG 339
+NYE DL +I+ +EL A N +L++I DHLRA +L+SDGV PSN G
Sbjct: 241 KHDNYEIDLFVALIRAIAELTG---ADPNGEQKASLRVIADHLRASSFLISDGVLPSNEG 297
Query: 340 RGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRIL 399
RGYV+RR++RRA+R G+LLG K L A + + + EL V+A E I
Sbjct: 298 RGYVLRRIMRRAMRHGQLLGAKEPLMYRLVWALVREMGQAYPEL-------VRA-ENLIE 349
Query: 400 EELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEIT 459
E LK EE RF +TL+RG +LD+ S + + G + G+ AF LYDT+GFP+++T
Sbjct: 350 ETLKLEETRFRKTLDRGLSILDEK-----SASLKKGDM--FDGETAFTLYDTYGFPLDLT 402
Query: 460 KEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSA--DLAEKIPDTEFLGYDT 517
++ G+ VD+ F M+ QR +++A+ + ++ L EK+ +EFLGYDT
Sbjct: 403 QDALRNRGIGVDIASFTDAMDRQRAKARASWAGSGDTATETIWFPLREKLGASEFLGYDT 462
Query: 518 LSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTA 577
A+ +V +L+ +GK V G V +++N+TPFYAESGGQ+GD G L
Sbjct: 463 EVAEGVVTALVKDGKEVDSAKSGDSVAIVMNQTPFYAESGGQVGDTGVL------TGDGV 516
Query: 578 VVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKK 637
V + D +K G ++VH GT+ +G +++G ++ VD R + +H+ATHLL AL++
Sbjct: 517 RVRITDTQKKAGDLYVHLGTVEQGTVKLGVPLQLEVDHGRRTAIRANHSATHLLHEALRQ 576
Query: 638 VIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDA 697
V+G +Q GSLVA +RLRFDF ++P+ EL IE + N + + + T+ MA+DDA
Sbjct: 577 VLGDHIAQRGSLVAPERLRFDFAHNKPITAEELRRIEDIANDVVLENGEVVTRSMAVDDA 636
Query: 698 KRAGAIAMFGEKYGEQVKISS 718
+ +GA A+FGEKYG++V++ S
Sbjct: 637 RDSGARALFGEKYGDEVRVVS 657
>gi|184157474|ref|YP_001845813.1| alanyl-tRNA synthetase [Acinetobacter baumannii ACICU]
gi|213156272|ref|YP_002318692.1| alanyl-tRNA synthetase [Acinetobacter baumannii AB0057]
gi|215484078|ref|YP_002326303.1| alanyl-tRNA synthetase [Acinetobacter baumannii AB307-0294]
gi|301346311|ref|ZP_07227052.1| alanyl-tRNA synthetase [Acinetobacter baumannii AB056]
gi|301510214|ref|ZP_07235451.1| alanyl-tRNA synthetase [Acinetobacter baumannii AB058]
gi|301596473|ref|ZP_07241481.1| alanyl-tRNA synthetase [Acinetobacter baumannii AB059]
gi|384131569|ref|YP_005514181.1| alaS [Acinetobacter baumannii 1656-2]
gi|384142558|ref|YP_005525268.1| alanyl-tRNA synthetase [Acinetobacter baumannii MDR-ZJ06]
gi|385236892|ref|YP_005798231.1| alanyl-tRNA synthetase [Acinetobacter baumannii TCDC-AB0715]
gi|416150783|ref|ZP_11603473.1| alanyl-tRNA synthetase [Acinetobacter baumannii AB210]
gi|421644594|ref|ZP_16085072.1| alanine--tRNA ligase [Acinetobacter baumannii IS-235]
gi|421646435|ref|ZP_16086887.1| alanine--tRNA ligase [Acinetobacter baumannii IS-251]
gi|421657240|ref|ZP_16097513.1| alanine--tRNA ligase [Acinetobacter baumannii Naval-83]
gi|421686890|ref|ZP_16126627.1| alanine--tRNA ligase [Acinetobacter baumannii IS-143]
gi|421700211|ref|ZP_16139728.1| alanine--tRNA ligase [Acinetobacter baumannii IS-58]
gi|421790781|ref|ZP_16226975.1| alanine--tRNA ligase [Acinetobacter baumannii Naval-2]
gi|421806436|ref|ZP_16242300.1| alanine--tRNA ligase [Acinetobacter baumannii OIFC035]
gi|183209068|gb|ACC56466.1| Alanyl-tRNA synthetase [Acinetobacter baumannii ACICU]
gi|213055432|gb|ACJ40334.1| alanyl-tRNA synthetase [Acinetobacter baumannii AB0057]
gi|213985935|gb|ACJ56234.1| alanyl-tRNA synthetase [Acinetobacter baumannii AB307-0294]
gi|322507789|gb|ADX03243.1| alaS [Acinetobacter baumannii 1656-2]
gi|323517389|gb|ADX91770.1| alanyl-tRNA synthetase [Acinetobacter baumannii TCDC-AB0715]
gi|333363850|gb|EGK45864.1| alanyl-tRNA synthetase [Acinetobacter baumannii AB210]
gi|347593051|gb|AEP05772.1| alanyl-tRNA synthetase [Acinetobacter baumannii MDR-ZJ06]
gi|404566500|gb|EKA71643.1| alanine--tRNA ligase [Acinetobacter baumannii IS-143]
gi|404570593|gb|EKA75666.1| alanine--tRNA ligase [Acinetobacter baumannii IS-58]
gi|408504735|gb|EKK06470.1| alanine--tRNA ligase [Acinetobacter baumannii IS-235]
gi|408517822|gb|EKK19360.1| alanine--tRNA ligase [Acinetobacter baumannii IS-251]
gi|408713816|gb|EKL58972.1| alanine--tRNA ligase [Acinetobacter baumannii Naval-83]
gi|410404809|gb|EKP56867.1| alanine--tRNA ligase [Acinetobacter baumannii Naval-2]
gi|410417780|gb|EKP69548.1| alanine--tRNA ligase [Acinetobacter baumannii OIFC035]
Length = 883
Score = 552 bits (1422), Expect = e-154, Method: Compositional matrix adjust.
Identities = 299/682 (43%), Positives = 429/682 (62%), Gaps = 48/682 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FL ++ ++GH + S+SLVP DPT+L T AGM QFK FLG R RA TSQ+
Sbjct: 11 IREAFLRYFETQGHTRVASSSLVPANDPTLLFTNAGMNQFKDCFLGLEKRDYVRATTSQK 70
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND++NVG T+RHHTFFEMLGNFSFGDYFK++A+++AWEF T E LP ++
Sbjct: 71 CVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKRDALKFAWEFLTSEQWLALPKDK 130
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
L+++VY DDEA++IWNKE+G+ E I R+G A DNFW G TGPCGPCSEI++
Sbjct: 131 LYVTVYHTDDEAYDIWNKEIGLAPERIIRIGDNKGEKYASDNFWAMGDTGPCGPCSEIFF 190
Query: 219 DF--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARI 276
D H G D RFIE +N VFMQ+N+ DG L PL ++DTG+GLERI+ +
Sbjct: 191 DHGEHIWGGLPGSPEEDGDRFIEIWNNVFMQFNRTADGVLHPLPAPSVDTGMGLERISAV 250
Query: 277 LQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPS 336
LQ V +NY+ DL ++K A+ + + D +L+++ DH R+ +L++DGV PS
Sbjct: 251 LQHVNSNYDIDLFQHLLKAAANIIGIE-----DEGQPSLRVVADHARSCCFLIADGVNPS 305
Query: 337 NIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQ 396
N GRGYV+RR+IRRAVR G LG G F + + IE+ +++AR +
Sbjct: 306 NEGRGYVLRRIIRRAVRHGNKLGATG--------TFFYKMLQPLIEVMGQAYPELEARRE 357
Query: 397 RILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPV 456
I L REE +F +TLE+G KLL+ LA +T + G F LYDT+GFP
Sbjct: 358 VIEATLIREEEQFAKTLEQGLKLLEGELAQLKDKT--------IPGATVFKLYDTYGFPT 409
Query: 457 EITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYD 516
++T ++A E G +D GF++EM QR Q A +A K +VD + ++ + +T+F GY
Sbjct: 410 DLTADIARERGFIIDEAGFEVEMAAQR---QRARDAGKFAVDYN-NIVKVEGETQFDGYT 465
Query: 517 TLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQT 576
+ + + ++ +G V +VS+G + ++LN+TPFYAESGGQIGD G +T
Sbjct: 466 NTTGQGQIVAIYKDGVQVDEVSEGDEALIVLNQTPFYAESGGQIGDTGIF------KNET 519
Query: 577 AVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALK 636
+ EV+D KKS G FVH+G + G L+ + VEAIV +R+ +H+ATHLL AAL+
Sbjct: 520 GIFEVQDTKKS-GGAFVHQGIVTVGNLKTSQNVEAIVKADIREATARNHSATHLLHAALR 578
Query: 637 KVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDD 696
+++G Q GSLVA D LRFDF +P+ +L+++ERL+N I + T+++ ++
Sbjct: 579 QILGSHVQQKGSLVASDILRFDFANDQPVSFEQLQQVERLVNAEIIANTAVTTELLDIET 638
Query: 697 AKRAGAIAMFGEKYGEQVKISS 718
AK GA+ +FGEKYG++V++ S
Sbjct: 639 AKAKGAMMLFGEKYGDEVRVLS 660
>gi|445486440|ref|ZP_21457444.1| alanine--tRNA ligase [Acinetobacter baumannii AA-014]
gi|444769513|gb|ELW93691.1| alanine--tRNA ligase [Acinetobacter baumannii AA-014]
Length = 885
Score = 552 bits (1422), Expect = e-154, Method: Compositional matrix adjust.
Identities = 299/682 (43%), Positives = 429/682 (62%), Gaps = 48/682 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FL ++ ++GH + S+SLVP DPT+L T AGM QFK FLG R RA TSQ+
Sbjct: 13 IREAFLRYFETQGHTRVASSSLVPANDPTLLFTNAGMNQFKDCFLGLEKRDYVRATTSQK 72
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND++NVG T+RHHTFFEMLGNFSFGDYFK++A+++AWEF T E LP ++
Sbjct: 73 CVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKRDALKFAWEFLTSEQWLALPKDK 132
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
L+++VY DDEA++IWNKE+G+ E I R+G A DNFW G TGPCGPCSEI++
Sbjct: 133 LYVTVYHTDDEAYDIWNKEIGLAPERIIRIGDNKGEKYASDNFWAMGDTGPCGPCSEIFF 192
Query: 219 DF--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARI 276
D H G D RFIE +N VFMQ+N+ DG L PL ++DTG+GLERI+ +
Sbjct: 193 DHGEHIWGGLPGSPEEDGDRFIEIWNNVFMQFNRTADGVLHPLPAPSVDTGMGLERISAV 252
Query: 277 LQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPS 336
LQ V +NY+ DL ++K A+ + + D +L+++ DH R+ +L++DGV PS
Sbjct: 253 LQHVNSNYDIDLFQHLLKAAANIIGIE-----DEGQPSLRVVADHARSCCFLIADGVNPS 307
Query: 337 NIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQ 396
N GRGYV+RR+IRRAVR G LG G F + + IE+ +++AR +
Sbjct: 308 NEGRGYVLRRIIRRAVRHGNKLGATG--------TFFYKMLQPLIEVMGQAYPELEARRE 359
Query: 397 RILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPV 456
I L REE +F +TLE+G KLL+ LA +T + G F LYDT+GFP
Sbjct: 360 VIEATLIREEEQFAKTLEQGLKLLEGELAQLKDKT--------IPGATVFKLYDTYGFPT 411
Query: 457 EITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYD 516
++T ++A E G +D GF++EM QR Q A +A K +VD + ++ + +T+F GY
Sbjct: 412 DLTADIARERGFIIDEAGFEVEMAAQR---QRARDAGKFAVDYN-NIVKVEGETQFDGYT 467
Query: 517 TLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQT 576
+ + + ++ +G V +VS+G + ++LN+TPFYAESGGQIGD G +T
Sbjct: 468 NTTGQGQIVAIYKDGVQVDEVSEGDEALIVLNQTPFYAESGGQIGDTGIF------KNET 521
Query: 577 AVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALK 636
+ EV+D KKS G FVH+G + G L+ + VEAIV +R+ +H+ATHLL AAL+
Sbjct: 522 GIFEVQDTKKS-GGAFVHQGIVTVGNLKTSQNVEAIVKADIREATARNHSATHLLHAALR 580
Query: 637 KVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDD 696
+++G Q GSLVA D LRFDF +P+ +L+++ERL+N I + T+++ ++
Sbjct: 581 QILGSHVQQKGSLVASDILRFDFANDQPVSFEQLQQVERLVNAEIIANTAVTTELLDIET 640
Query: 697 AKRAGAIAMFGEKYGEQVKISS 718
AK GA+ +FGEKYG++V++ S
Sbjct: 641 AKAKGAMMLFGEKYGDEVRVLS 662
>gi|421679093|ref|ZP_16118972.1| alanine--tRNA ligase [Acinetobacter baumannii OIFC111]
gi|410391585|gb|EKP43952.1| alanine--tRNA ligase [Acinetobacter baumannii OIFC111]
Length = 885
Score = 552 bits (1422), Expect = e-154, Method: Compositional matrix adjust.
Identities = 299/682 (43%), Positives = 429/682 (62%), Gaps = 48/682 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FL ++ ++GH + S+SLVP DPT+L T AGM QFK FLG R RA TSQ+
Sbjct: 13 IREAFLRYFETQGHTRVASSSLVPANDPTLLFTNAGMNQFKDCFLGLEKRDYVRATTSQK 72
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND++NVG T+RHHTFFEMLGNFSFGDYFK++A+++AWEF T E LP ++
Sbjct: 73 CVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKRDALKFAWEFLTSEQWLALPKDK 132
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
L+++VY DDEA++IWNKE+G+ E I R+G A DNFW G TGPCGPCSEI++
Sbjct: 133 LYVTVYHTDDEAYDIWNKEIGLAPERIIRIGDNKGEKYASDNFWAMGDTGPCGPCSEIFF 192
Query: 219 DF--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARI 276
D H G D RFIE +N VFMQ+N+ DG L PL ++DTG+GLERI+ +
Sbjct: 193 DHGEHIWGGLPGSPEEDGDRFIEIWNNVFMQFNRTADGVLHPLPAPSVDTGMGLERISAV 252
Query: 277 LQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPS 336
LQ V +NY+ DL ++K A+ + + D +L+++ DH R+ +L++DGV PS
Sbjct: 253 LQHVNSNYDIDLFQHLLKAAANIIGIE-----DEGQPSLRVVADHARSCCFLIADGVNPS 307
Query: 337 NIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQ 396
N GRGYV+RR+IRRAVR G LG G F + + IE+ +++AR +
Sbjct: 308 NEGRGYVLRRIIRRAVRHGNKLGATG--------TFFYKMLQPLIEVMGQAYPELEARRE 359
Query: 397 RILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPV 456
I L REE +F +TLE+G KLL+ LA +T + G F LYDT+GFP
Sbjct: 360 VIEATLIREEEQFAKTLEQGLKLLEGELAQLKDKT--------IPGATVFKLYDTYGFPT 411
Query: 457 EITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYD 516
++T ++A E G +D GF++EM QR Q A +A K +VD + ++ + +T+F GY
Sbjct: 412 DLTADIARERGFIIDEAGFEVEMAAQR---QRARDAGKFAVDYN-NIVKVEGETQFDGYT 467
Query: 517 TLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQT 576
+ + + ++ +G V +VS+G + ++LN+TPFYAESGGQIGD G +T
Sbjct: 468 NTTGQGQIVAIYKDGVQVDEVSEGDEALIVLNQTPFYAESGGQIGDTGIF------KNET 521
Query: 577 AVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALK 636
+ EV+D KKS G FVH+G + G L+ + VEAIV +R+ +H+ATHLL AAL+
Sbjct: 522 GIFEVQDTKKS-GGAFVHQGIVTVGNLKTSQNVEAIVKADIREATARNHSATHLLHAALR 580
Query: 637 KVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDD 696
+++G Q GSLVA D LRFDF +P+ +L+++ERL+N I + T+++ ++
Sbjct: 581 QILGSHVQQKGSLVASDILRFDFANDQPVSFEQLQQVERLVNAEIIANTAVTTELLDIET 640
Query: 697 AKRAGAIAMFGEKYGEQVKISS 718
AK GA+ +FGEKYG++V++ S
Sbjct: 641 AKAKGAMMLFGEKYGDEVRVLS 662
>gi|417568885|ref|ZP_12219748.1| alanine--tRNA ligase [Acinetobacter baumannii OIFC189]
gi|417574654|ref|ZP_12225508.1| alanine--tRNA ligase [Acinetobacter baumannii Canada BC-5]
gi|417578535|ref|ZP_12229368.1| alanine--tRNA ligase [Acinetobacter baumannii Naval-17]
gi|421629378|ref|ZP_16070112.1| alanine--tRNA ligase [Acinetobacter baumannii OIFC180]
gi|421790240|ref|ZP_16226466.1| alanine--tRNA ligase [Acinetobacter baumannii Naval-82]
gi|421800716|ref|ZP_16236685.1| alanine--tRNA ligase [Acinetobacter baumannii Canada BC1]
gi|425751927|ref|ZP_18869866.1| alanine--tRNA ligase [Acinetobacter baumannii Naval-113]
gi|445452384|ref|ZP_21444915.1| alanine--tRNA ligase [Acinetobacter baumannii WC-A-92]
gi|445467381|ref|ZP_21450705.1| alanine--tRNA ligase [Acinetobacter baumannii OIFC338]
gi|445476782|ref|ZP_21453969.1| alanine--tRNA ligase [Acinetobacter baumannii Naval-78]
gi|395555180|gb|EJG21182.1| alanine--tRNA ligase [Acinetobacter baumannii OIFC189]
gi|395567673|gb|EJG28347.1| alanine--tRNA ligase [Acinetobacter baumannii Naval-17]
gi|400210222|gb|EJO41192.1| alanine--tRNA ligase [Acinetobacter baumannii Canada BC-5]
gi|408701613|gb|EKL47037.1| alanine--tRNA ligase [Acinetobacter baumannii OIFC180]
gi|410395325|gb|EKP47631.1| alanine--tRNA ligase [Acinetobacter baumannii Naval-82]
gi|410406587|gb|EKP58590.1| alanine--tRNA ligase [Acinetobacter baumannii Canada BC1]
gi|425499548|gb|EKU65582.1| alanine--tRNA ligase [Acinetobacter baumannii Naval-113]
gi|444754393|gb|ELW79010.1| alanine--tRNA ligase [Acinetobacter baumannii WC-A-92]
gi|444776547|gb|ELX00588.1| alanine--tRNA ligase [Acinetobacter baumannii OIFC338]
gi|444777308|gb|ELX01339.1| alanine--tRNA ligase [Acinetobacter baumannii Naval-78]
Length = 885
Score = 552 bits (1422), Expect = e-154, Method: Compositional matrix adjust.
Identities = 299/682 (43%), Positives = 429/682 (62%), Gaps = 48/682 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FL ++ ++GH + S+SLVP DPT+L T AGM QFK FLG R RA TSQ+
Sbjct: 13 IREAFLRYFETQGHTRVASSSLVPANDPTLLFTNAGMNQFKDCFLGLEKRDYVRATTSQK 72
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND++NVG T+RHHTFFEMLGNFSFGDYFK++A+++AWEF T E LP ++
Sbjct: 73 CVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKRDALKFAWEFLTSEQWLALPKDK 132
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
L+++VY DDEA++IWNKE+G+ E I R+G A DNFW G TGPCGPCSEI++
Sbjct: 133 LYVTVYHTDDEAYDIWNKEIGLAPERIIRIGDNKGEKYASDNFWAMGDTGPCGPCSEIFF 192
Query: 219 DF--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARI 276
D H G D RFIE +N VFMQ+N+ DG L PL ++DTG+GLERI+ +
Sbjct: 193 DHGEHIWGGLPGSPEEDGDRFIEIWNNVFMQFNRTADGVLHPLPAPSVDTGMGLERISAV 252
Query: 277 LQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPS 336
LQ V +NY+ DL ++K A+ + + D +L+++ DH R+ +L++DGV PS
Sbjct: 253 LQHVNSNYDIDLFQHLLKAAANIIGIE-----DEGQPSLRVVADHARSCCFLIADGVNPS 307
Query: 337 NIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQ 396
N GRGYV+RR+IRRAVR G LG G F + + IE+ +++AR +
Sbjct: 308 NEGRGYVLRRIIRRAVRHGNKLGATG--------TFFYKMLQPLIEVMGQAYPELEARRE 359
Query: 397 RILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPV 456
I L REE +F +TLE+G KLL+ LA +T + G F LYDT+GFP
Sbjct: 360 VIEATLIREEEQFAKTLEQGLKLLEGELAQLKDKT--------IPGATVFKLYDTYGFPT 411
Query: 457 EITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYD 516
++T ++A E G +D GF++EM QR Q A +A K +VD + ++ + +T+F GY
Sbjct: 412 DLTADIARERGFIIDEAGFEVEMAAQR---QRARDAGKFAVDYN-NIVKVEGETQFDGYT 467
Query: 517 TLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQT 576
+ + + ++ +G V +VS+G + ++LN+TPFYAESGGQIGD G +T
Sbjct: 468 NTTGQGQIVAIYKDGVQVDEVSEGDEALIVLNQTPFYAESGGQIGDTGIF------KNET 521
Query: 577 AVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALK 636
+ EV+D KKS G FVH+G + G L+ + VEAIV +R+ +H+ATHLL AAL+
Sbjct: 522 GIFEVQDTKKS-GGAFVHQGIVTVGNLKTSQNVEAIVKADIREATARNHSATHLLHAALR 580
Query: 637 KVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDD 696
+++G Q GSLVA D LRFDF +P+ +L+++ERL+N I + T+++ ++
Sbjct: 581 QILGSHVQQKGSLVASDILRFDFANDQPVSFEQLQQVERLVNAEIIANTAVTTELLDIET 640
Query: 697 AKRAGAIAMFGEKYGEQVKISS 718
AK GA+ +FGEKYG++V++ S
Sbjct: 641 AKAKGAMMLFGEKYGDEVRVLS 662
>gi|421654378|ref|ZP_16094708.1| alanine--tRNA ligase [Acinetobacter baumannii Naval-72]
gi|408511145|gb|EKK12799.1| alanine--tRNA ligase [Acinetobacter baumannii Naval-72]
Length = 883
Score = 552 bits (1422), Expect = e-154, Method: Compositional matrix adjust.
Identities = 299/682 (43%), Positives = 429/682 (62%), Gaps = 48/682 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FL ++ ++GH + S+SLVP DPT+L T AGM QFK FLG R RA TSQ+
Sbjct: 11 IREAFLRYFETQGHTRVASSSLVPANDPTLLFTNAGMNQFKDCFLGLEKRDYVRATTSQK 70
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND++NVG T+RHHTFFEMLGNFSFGDYFK++A+++AWEF T E LP ++
Sbjct: 71 CVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKRDALKFAWEFLTSEQWLALPKDK 130
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
L+++VY DDEA++IWNKE+G+ E I R+G A DNFW G TGPCGPCSEI++
Sbjct: 131 LYVTVYHTDDEAYDIWNKEIGLAPERIIRIGDNKGEKYASDNFWAMGDTGPCGPCSEIFF 190
Query: 219 DF--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARI 276
D H G D RFIE +N VFMQ+N+ DG L PL ++DTG+GLERI+ +
Sbjct: 191 DHGEHIWGGLPGSPEEDGDRFIEIWNNVFMQFNRTADGVLHPLPAPSVDTGMGLERISAV 250
Query: 277 LQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPS 336
LQ V +NY+ DL ++K A+ + + D +L+++ DH R+ +L++DGV PS
Sbjct: 251 LQHVNSNYDIDLFQHLLKAAANIIGIE-----DEGQPSLRVVADHARSCCFLIADGVNPS 305
Query: 337 NIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQ 396
N GRGYV+RR+IRRAVR G LG G F + + IE+ +++AR +
Sbjct: 306 NEGRGYVLRRIIRRAVRHGNKLGATG--------TFFYKMLQPLIEVMGQAYPELEARRE 357
Query: 397 RILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPV 456
I L REE +F +TLE+G KLL+ LA +T + G F LYDT+GFP
Sbjct: 358 VIEATLIREEEQFAKTLEQGLKLLEGELAQLKDKT--------IPGATVFKLYDTYGFPT 409
Query: 457 EITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYD 516
++T ++A E G +D GF++EM QR Q A +A K +VD + ++ + +T+F GY
Sbjct: 410 DLTADIARERGFIIDEAGFEVEMAAQR---QRARDAGKFAVDYN-NIVKVEGETQFDGYT 465
Query: 517 TLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQT 576
+ + + ++ +G V +VS+G + ++LN+TPFYAESGGQIGD G +T
Sbjct: 466 NTTGQGQIVAIYKDGVQVDEVSEGDEALIVLNQTPFYAESGGQIGDTGIF------KNET 519
Query: 577 AVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALK 636
+ EV+D KKS G FVH+G + G L+ + VEAIV +R+ +H+ATHLL AAL+
Sbjct: 520 GIFEVQDTKKS-GGAFVHQGIVTVGNLKTSQNVEAIVKADIREATARNHSATHLLHAALR 578
Query: 637 KVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDD 696
+++G Q GSLVA D LRFDF +P+ +L+++ERL+N I + T+++ ++
Sbjct: 579 QILGSHVQQKGSLVASDILRFDFANDQPVSFEQLQQVERLVNAEIIANTAVTTELLDIET 638
Query: 697 AKRAGAIAMFGEKYGEQVKISS 718
AK GA+ +FGEKYG++V++ S
Sbjct: 639 AKAKGAMMLFGEKYGDEVRVLS 660
>gi|260887236|ref|ZP_05898499.1| alanine--tRNA ligase [Selenomonas sputigena ATCC 35185]
gi|260863298|gb|EEX77798.1| alanine--tRNA ligase [Selenomonas sputigena ATCC 35185]
Length = 871
Score = 552 bits (1422), Expect = e-154, Method: Compositional matrix adjust.
Identities = 303/676 (44%), Positives = 429/676 (63%), Gaps = 32/676 (4%)
Query: 49 SGDSIRKRFLDFYA-SRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRA 106
+G+ +R+ +L F+A +GH LPSASL+P DPT+L+ AGM FKP F GK+ R
Sbjct: 2 TGNELREAYLQFFAEKKGHLRLPSASLIPANDPTLLMIGAGMAPFKPFFTGKMKPPRTRI 61
Query: 107 ATSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRL 166
TSQRC+RT D+ENVGRT+RH T+FEMLGNFSFGDYFKKEAI WAWEF T LP +L
Sbjct: 62 TTSQRCVRTGDIENVGRTARHQTYFEMLGNFSFGDYFKKEAIPWAWEFLTDVLDLPKEKL 121
Query: 167 WISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGC 226
W++VY DDEA IW ++ G P +HI ++ DDNFW G GPCGP SEIY D +RGC
Sbjct: 122 WVTVYPKDDEAAAIWREQPGFPQDHIVKL--DDNFWEIG-PGPCGPDSEIYIDLGEERGC 178
Query: 227 SDVDLG---DDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNN 283
D D R++E +NLVF Q+++ +DG PL+ KNIDTG GLER+A +LQ N
Sbjct: 179 GSPDCAVGCDCDRYLEIWNLVFTQFDRTEDGQYNPLEHKNIDTGCGLERLASVLQNKKTN 238
Query: 284 YETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYV 343
+ETDL+FPII+ AS+++ V Y + N +++LK+I DH R++ ++ DG+ PSN GRGYV
Sbjct: 239 FETDLLFPIIEYASKVSGVVYGE-NAEKDVSLKVIADHARSMAIMIMDGILPSNEGRGYV 297
Query: 344 VRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELK 403
+RR++RRAVR GR+LGI LEGA + ++AE I ++ +++ I + +
Sbjct: 298 LRRILRRAVRHGRILGIHDK---FLEGA-IDAVAE--IYKGAADFEELAEKKEYIKKVIS 351
Query: 404 REELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVA 463
EE RF TL +G +LL+ + D RE V L G+ F LYDT+GFP E+T E+
Sbjct: 352 IEEDRFAATLAQGMELLNGHIEDL---KREGKKV--LPGEIGFKLYDTYGFPWEVTDEIL 406
Query: 464 EEHGVSVDMKGFDIEMENQRRQSQAA-HNAVKLSVDDSADLAEKIPDTEFLGYDTLSAKA 522
E+ + +D F+ ME QR +++AA +++V D + + DT L D + ++
Sbjct: 407 HENEMELDKDSFEKAMEEQRERARAARQENQRVAVPDLSGI-----DTSHLCVDENAKES 461
Query: 523 IVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVK 582
V ++ +G V +++ G + ++L TPFYAE GGQ+GD G L G V+V
Sbjct: 462 TVVAIWKDGVLVDELADGEEAGIILQSTPFYAEGGGQVGDAGLLETEFGR------VQVA 515
Query: 583 DVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQE 642
+ KK H G + EG+L+VG V +D + + +HTATHLLQAALK+V+G +
Sbjct: 516 NAKKLPDGTVYHIGYVEEGMLKVGDHVSIRIDWMKKLSSARNHTATHLLQAALKRVVGDQ 575
Query: 643 TSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGA 702
+QAGSLV +RLRFDF+ P+ +L+E+ERL+N I A ++ M +D AK+ GA
Sbjct: 576 VNQAGSLVMPERLRFDFSNFEPVTALQLQEVERLVNEQILMAKPVEIAQMEIDKAKKLGA 635
Query: 703 IAMFGEKYGEQVKISS 718
+A+FGEKYG+ V++ S
Sbjct: 636 MALFGEKYGDVVRVVS 651
>gi|117621345|ref|YP_858162.1| alanyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila ATCC
7966]
gi|205829972|sp|A0KPG1.1|SYA_AERHH RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|117562752|gb|ABK39700.1| alanyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila ATCC
7966]
Length = 874
Score = 552 bits (1422), Expect = e-154, Method: Compositional matrix adjust.
Identities = 307/685 (44%), Positives = 433/685 (63%), Gaps = 51/685 (7%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S IR FL+++ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA
Sbjct: 4 STSEIRTAFLEYFRSQGHQVVSSSSLVPHNDPTLLFTNAGMNQFKDVFLGADKRAYNRAT 63
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
TSQRC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI++AW F T LP
Sbjct: 64 TSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAIKFAWGFLTEVLQLPK 123
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEI 216
RL ++VY DDEAF+IW KEVGVP + I R+G A DNFW G TGPCGPC+EI
Sbjct: 124 ERLLVTVYATDDEAFDIWEKEVGVPADRIVRIGDNKGAPYASDNFWAMGDTGPCGPCTEI 183
Query: 217 YYDFHPD-----RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLE 271
+YD H D R S + GD RFIE +N+VFMQ+N++ DG++EPL + ++DTG+GLE
Sbjct: 184 FYD-HGDHIWGGRPGSPEEDGD--RFIEIWNVVFMQFNRQADGTMEPLPRPSVDTGMGLE 240
Query: 272 RIARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSD 331
RI+ I+Q V +NYE D+ +IKKA+E+ S D +N +L++I DH+R+ +L++D
Sbjct: 241 RISAIMQGVHSNYEIDIFQALIKKAAEIVGTS-----DLSNQSLRVIADHIRSCAFLVAD 295
Query: 332 GVFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDV 391
GV PSN GRGYV+RR+IRRAVR GR LG E F AE A ++ + +++
Sbjct: 296 GVMPSNEGRGYVLRRIIRRAVRHGRKLGAT-------EVFFYKLAAELAAQMK-DVAAEL 347
Query: 392 KAREQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDT 451
A+ + L+ EE +FV+TL+RG LL+ +LA+ G + G+ F LYDT
Sbjct: 348 IAQLPLVERVLRIEEEQFVRTLDRGLLLLEDVLANL-------GDAKVIPGEVVFKLYDT 400
Query: 452 FGFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTE 511
+GFP ++T +V E + +D +GF EME QR +++ A ++ ++ ++ L + P
Sbjct: 401 YGFPADLTADVVREREIGIDEEGFKAEMEKQRARAKEA-SSFGVNYNEMLKLDFETP--- 456
Query: 512 FLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQG 571
F GY TL+ + V + V + G + ++L +TPFYAESGGQIGD G L V G
Sbjct: 457 FTGYKTLTERTRVVGIYKGVDEVSGLIAGDEAVIVLEQTPFYAESGGQIGDSGTLKVDDG 516
Query: 572 TNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLL 631
+ V D K+ G +HKG + G LE G EVEA+VD + RQ ++H+ THLL
Sbjct: 517 ------IFAVTDTVKA-GKAIIHKGYMELGTLEKGAEVEAVVDGERRQAIALNHSVTHLL 569
Query: 632 QAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKV 691
AAL++ +G+ +Q GSLV +R+RFDF+ + + +E L+N I + + T++
Sbjct: 570 HAALRQALGEHVTQKGSLVGAERMRFDFSHFEGMTMATIRRVEELVNNQIRANHEITTQL 629
Query: 692 MALDDAKRAGAIAMFGEKYGEQVKI 716
M L+ AK AGA+A+FGEKY + V++
Sbjct: 630 MDLEAAKSAGAMALFGEKYEDDVRV 654
>gi|445408743|ref|ZP_21432643.1| alanine--tRNA ligase [Acinetobacter baumannii Naval-57]
gi|444780679|gb|ELX04615.1| alanine--tRNA ligase [Acinetobacter baumannii Naval-57]
Length = 883
Score = 552 bits (1422), Expect = e-154, Method: Compositional matrix adjust.
Identities = 299/682 (43%), Positives = 429/682 (62%), Gaps = 48/682 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FL ++ ++GH + S+SLVP DPT+L T AGM QFK FLG R RA TSQ+
Sbjct: 11 IREAFLRYFETQGHTRVASSSLVPANDPTLLFTNAGMNQFKDCFLGLEKRDYVRATTSQK 70
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND++NVG T+RHHTFFEMLGNFSFGDYFK++A+++AWEF T E LP ++
Sbjct: 71 CVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKRDALKFAWEFLTSEQWLALPKDK 130
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
L+++VY DDEA++IWNKE+G+ E I R+G A DNFW G TGPCGPCSEI++
Sbjct: 131 LYVTVYHTDDEAYDIWNKEIGLAPERIIRIGDNKGEKYASDNFWAMGDTGPCGPCSEIFF 190
Query: 219 DF--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARI 276
D H G D RFIE +N VFMQ+N+ DG L PL ++DTG+GLERI+ +
Sbjct: 191 DHGEHIWGGLPGSPEEDGDRFIEIWNNVFMQFNRTADGVLHPLPAPSVDTGMGLERISAV 250
Query: 277 LQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPS 336
LQ V +NY+ DL ++K A+ + + D +L+++ DH R+ +L++DGV PS
Sbjct: 251 LQHVNSNYDIDLFQHLLKAAANIIGIE-----DEGQPSLRVVADHARSCCFLIADGVNPS 305
Query: 337 NIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQ 396
N GRGYV+RR+IRRAVR G LG G F + + IE+ +++AR +
Sbjct: 306 NEGRGYVLRRIIRRAVRHGNKLGATG--------TFFYKMLQPLIEVMGQAYPELEARRE 357
Query: 397 RILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPV 456
I L REE +F +TLE+G KLL+ LA +T + G F LYDT+GFP
Sbjct: 358 VIEATLIREEEQFAKTLEQGLKLLEGELAQLKDKT--------IPGATVFKLYDTYGFPT 409
Query: 457 EITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYD 516
++T ++A E G +D GF++EM QR Q A +A K +VD + ++ + +T+F GY
Sbjct: 410 DLTADIARERGFIIDEAGFEVEMAAQR---QRARDAGKFAVDYN-NIVKVEGETQFDGYT 465
Query: 517 TLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQT 576
+ + + ++ +G V +VS+G + ++LN+TPFYAESGGQIGD G +T
Sbjct: 466 NTTGQGQIVAIYKDGVQVDEVSEGDEALIVLNQTPFYAESGGQIGDTGIF------KNET 519
Query: 577 AVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALK 636
+ EV+D KKS G FVH+G + G L+ + VEAIV +R+ +H+ATHLL AAL+
Sbjct: 520 GIFEVQDTKKS-GGAFVHQGIVTVGNLKTSQNVEAIVKADIREATARNHSATHLLHAALR 578
Query: 637 KVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDD 696
+++G Q GSLVA D LRFDF +P+ +L+++ERL+N I + T+++ ++
Sbjct: 579 QILGSHVQQKGSLVASDILRFDFANDQPVSFEQLQQVERLVNAEIIANTAVTTELLDIET 638
Query: 697 AKRAGAIAMFGEKYGEQVKISS 718
AK GA+ +FGEKYG++V++ S
Sbjct: 639 AKAKGAMMLFGEKYGDEVRVLS 660
>gi|412338318|ref|YP_006967073.1| alanyl-tRNA synthetase [Bordetella bronchiseptica 253]
gi|408768152|emb|CCJ52911.1| alanyl-tRNA synthetase [Bordetella bronchiseptica 253]
Length = 874
Score = 552 bits (1422), Expect = e-154, Method: Compositional matrix adjust.
Identities = 305/679 (44%), Positives = 414/679 (60%), Gaps = 46/679 (6%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR++FL F+ S+GH ++PS+SLVP DPT+L T +GM+QFK +F GK R RA +SQR
Sbjct: 6 IRQKFLQFFQSKGHTIVPSSSLVPANDPTLLFTNSGMVQFKDVFTGKEARAYTRATSSQR 65
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK+EAIQ+AWE T + LPA +LW
Sbjct: 66 SVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKREAIQYAWELLTQVYKLPAEKLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYYDF 220
++VY++DDEA++IW KEVGVP E I R+G A DNFW TGPCGPCSEI+YD
Sbjct: 126 VTVYQEDDEAYDIWAKEVGVPTERIIRIGDNKGARYASDNFWQMADTGPCGPCSEIFYDH 185
Query: 221 HPD--RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQ 278
PD G D R+IE +NLVFMQ+ + G++E L + +DTG+GLERIA +LQ
Sbjct: 186 GPDIWGGPPGSPEEDGDRYIEIWNLVFMQFERDAAGNMERLPKPCVDTGMGLERIAAVLQ 245
Query: 279 KVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNI 338
V +NYE DL +I A+ V D + +LK+I DH+RA +L+ DG+ PSN
Sbjct: 246 HVHSNYEIDLFQKLIAAAARETGV-----KDLADNSLKVIADHIRACAFLIVDGIIPSNE 300
Query: 339 GRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRI 398
GRGYV+RR++RRA+R G LG L + + + EL+ +R+
Sbjct: 301 GRGYVLRRIVRRALRHGYKLGQTKPFFHRLVPDLVAEMGDAYPELAQ--------VAERV 352
Query: 399 LEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEI 458
+ L++EE RF +TLE G K+LD AL++ + G +L G F LYDT+GFPV++
Sbjct: 353 AQVLRQEEERFGETLEHGMKILD----GALAKVAKGG---QLDGTTLFTLYDTYGFPVDL 405
Query: 459 TKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTL 518
T ++ E V VDM GF+ M+ QR Q++AA K++ S + AE T F GY+ L
Sbjct: 406 TADICREREVEVDMAGFEAAMQRQREQARAA-GKFKMAEGLSYEGAE----TRFEGYENL 460
Query: 519 SAKAI-VESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTA 577
+ V +L V G V +V G D V+L+ TPFYAESGGQ+GD G L
Sbjct: 461 ELSGVKVTALYVEGTQVEQVPAGQDAVVVLDATPFYAESGGQVGDTGLL------EAGGV 514
Query: 578 VVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKK 637
V D K VF H GT+ G L+VG + A VD R R +H+ATHL+ AL++
Sbjct: 515 RFAVADTLKIQPGVFGHHGTLEAGALKVGDTLLARVDAVRRARTVRNHSATHLMHKALRE 574
Query: 638 VIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDA 697
V+G Q GSLV D+ RFDF P+ ++ +E ++N + Q +VMA DDA
Sbjct: 575 VLGAHVQQRGSLVDPDKTRFDFAHDAPMTAEQIARVEAIVNAEVLANQATQAQVMAYDDA 634
Query: 698 KRAGAIAMFGEKYGEQVKI 716
+ GA+A+FGEKYG+ V++
Sbjct: 635 VKGGAMALFGEKYGDTVRV 653
>gi|397664253|ref|YP_006505791.1| alanyl-tRNA synthetase [Legionella pneumophila subsp. pneumophila]
gi|395127664|emb|CCD05863.1| alanyl-tRNA synthetase [Legionella pneumophila subsp. pneumophila]
Length = 860
Score = 552 bits (1422), Expect = e-154, Method: Compositional matrix adjust.
Identities = 306/676 (45%), Positives = 433/676 (64%), Gaps = 45/676 (6%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FL+++ RGH+++ S+SLVP DPT+L T AGM+QFK +FLG R RAAT+QR
Sbjct: 6 IRQAFLNYFVQRGHQIVASSSLVPSNDPTLLFTNAGMVQFKDLFLGLETRSYQRAATAQR 65
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK+EAIQ+AWEF T +PA RLW
Sbjct: 66 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKREAIQYAWEFLTEVLHIPAERLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPD---- 223
++VY++D EA +IW KE+ V E R G DNFW+ G TGPCGPC+EI+YD P+
Sbjct: 126 VTVYKEDLEAEDIWLKEMKVSPERFSRCGEKDNFWSMGDTGPCGPCTEIFYDHGPEVAGG 185
Query: 224 -RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPN 282
G D D GD R+IE +NLVFMQ+N+ +G L L + ++DTG+GLER+A ++Q V +
Sbjct: 186 PPGSPDED-GD--RYIEIWNLVFMQFNRDREGHLHLLPKPSVDTGMGLERLAAVIQGVHS 242
Query: 283 NYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGY 342
NYE D +IK ++L Q+ D + +LK+I DH+R+ +L+ DGV PSN GRGY
Sbjct: 243 NYEIDSFQYLIKAIAQL-----GQNIDLNHTSLKVIADHIRSCSFLIVDGVLPSNEGRGY 297
Query: 343 VVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEEL 402
V+RR+IRRAVR G LG+ L + + + EL I+S KA +RIL++
Sbjct: 298 VLRRIIRRAVRHGNKLGLPSPFFSKLVQPLIDVMGDAYPEL---INS--KAHIERILQQ- 351
Query: 403 KREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEV 462
EE +F +TLE+G +LL + + + LSG+ AF LYDT+GFP+++T ++
Sbjct: 352 --EENQFTRTLEQGLRLLQDQIKNLKGQ--------ELSGEVAFKLYDTYGFPIDLTADI 401
Query: 463 AEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTLSAKA 522
E G+ +DM+ F+ M+ QR QSQAA + + D A +++ +EF GY+ S +A
Sbjct: 402 IREQGLHIDMEAFNQLMQQQREQSQAAS---QFTTDYHA-VSQLDHQSEFHGYEKESMEA 457
Query: 523 IVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVK 582
+ LL G V ++KG+ V+L+ TPFYAESGGQ+GD G L G N +V
Sbjct: 458 KIIGLLQEGNEVKSINKGAKGAVILDHTPFYAESGGQVGDKGLLI---GKN---CSFQVD 511
Query: 583 DVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQE 642
D +K +G VH G + +G L + + A VD R +++HTATHLL AALKK++GQ
Sbjct: 512 DTQK-VGQAVVHYGEVIKGELTLDLSIHAQVDHIRRDAIRLNHTATHLLHAALKKIVGQH 570
Query: 643 TSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGA 702
Q GSLV +R RFDF+ L ++++IE ++N I N + T+VM ++ AK++GA
Sbjct: 571 VQQRGSLVDAERARFDFSHFEALNPQQIQQIEEVVNAQIRANNEVITQVMDIESAKQSGA 630
Query: 703 IAMFGEKYGEQVKISS 718
+A+FGEKY + V++ S
Sbjct: 631 VALFGEKYSDAVRVLS 646
>gi|411012063|ref|ZP_11388392.1| alanyl-tRNA ligase [Aeromonas aquariorum AAK1]
Length = 874
Score = 551 bits (1421), Expect = e-154, Method: Compositional matrix adjust.
Identities = 306/685 (44%), Positives = 436/685 (63%), Gaps = 51/685 (7%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S IR FL+++ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA
Sbjct: 4 STSEIRAAFLEYFRSQGHQVVSSSSLVPHNDPTLLFTNAGMNQFKDVFLGADKRAYNRAT 63
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
TSQRC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI++AW F T LP
Sbjct: 64 TSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAIKFAWGFLTEVLQLPK 123
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEI 216
RL ++VY DDEAF+IW KEVGVP + I R+G A DNFW G TGPCGPC+EI
Sbjct: 124 ERLLVTVYATDDEAFDIWEKEVGVPADRIVRIGDNKGAPYASDNFWAMGDTGPCGPCTEI 183
Query: 217 YYDFHPD-----RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLE 271
+YD H D R S + GD RFIE +N+VFMQ+N++ DG++EPL + ++DTG+GLE
Sbjct: 184 FYD-HGDHIWGGRPGSPEEDGD--RFIEIWNVVFMQFNRQADGTMEPLPRPSVDTGMGLE 240
Query: 272 RIARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSD 331
RI+ I+Q V +NYE D+ +IKKA+E+ + D +N +L++I DH+R+ +L++D
Sbjct: 241 RISAIMQGVHSNYEIDIFQALIKKAAEIVG-----TTDLSNQSLRVIADHIRSCAFLVAD 295
Query: 332 GVFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDV 391
GV PSN GRGYV+RR+IRRAVR GR LG + F AE A+++ + +++
Sbjct: 296 GVMPSNEGRGYVLRRIIRRAVRHGRKLGAT-------DVFFYKLAAELAVQMK-DVAAEL 347
Query: 392 KAREQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDT 451
A+ + L+ EE +FV+TL+RG LL+ DAL+ ++ +P G+ F LYDT
Sbjct: 348 IAQLPLVERVLRIEEEQFVRTLDRGLLLLE----DALANLGDAKVIP---GEVVFKLYDT 400
Query: 452 FGFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTE 511
+GFP ++T +V E + +D +GF EME QR +++ A ++ ++ ++ L + P
Sbjct: 401 YGFPADLTADVVREREIGIDEEGFKAEMEKQRARAKEA-SSFGVNYNEMLKLDFETP--- 456
Query: 512 FLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQG 571
F GY TL+ + V + V + G + ++L +TPFYAESGGQIGD G L V G
Sbjct: 457 FTGYKTLTERTRVVGIYKGVDEVSGLIAGDEAVIVLEQTPFYAESGGQIGDSGTLKVDDG 516
Query: 572 TNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLL 631
+ V D K+ G +HKG + G LE G EVEA+VD RQ ++H+ THLL
Sbjct: 517 ------IFAVTDTVKA-GKAIIHKGYMELGTLEKGAEVEAVVDGDRRQAIALNHSVTHLL 569
Query: 632 QAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKV 691
AAL++ +G+ +Q GSLV +R+RFDF+ + + +E L+N I + + T++
Sbjct: 570 HAALRQALGEHVTQKGSLVGAERMRFDFSHFEGMTMATIRRVEELVNNQIRANHEIITQL 629
Query: 692 MALDDAKRAGAIAMFGEKYGEQVKI 716
M L++AK AGA+A+FGEKY + V++
Sbjct: 630 MGLEEAKSAGAMALFGEKYEDDVRV 654
>gi|330831302|ref|YP_004394254.1| alanyl-tRNA synthetase [Aeromonas veronii B565]
gi|406675472|ref|ZP_11082661.1| alanyl-tRNA synthetase [Aeromonas veronii AMC35]
gi|423205109|ref|ZP_17191665.1| alanyl-tRNA synthetase [Aeromonas veronii AMC34]
gi|423208045|ref|ZP_17194599.1| alanyl-tRNA synthetase [Aeromonas veronii AER397]
gi|328806438|gb|AEB51637.1| Alanyl-tRNA synthetase [Aeromonas veronii B565]
gi|404619681|gb|EKB16590.1| alanyl-tRNA synthetase [Aeromonas veronii AER397]
gi|404624930|gb|EKB21748.1| alanyl-tRNA synthetase [Aeromonas veronii AMC34]
gi|404627804|gb|EKB24604.1| alanyl-tRNA synthetase [Aeromonas veronii AMC35]
Length = 874
Score = 551 bits (1421), Expect = e-154, Method: Compositional matrix adjust.
Identities = 307/685 (44%), Positives = 436/685 (63%), Gaps = 51/685 (7%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S IR FL+++ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA
Sbjct: 4 STSEIRAAFLEYFRSQGHQVVSSSSLVPHNDPTLLFTNAGMNQFKDVFLGADKRAYNRAT 63
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
TSQRC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI++AW F T LP
Sbjct: 64 TSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAIKFAWGFLTEVLQLPK 123
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEI 216
+RL ++VY DDEAF+IW KEVGVP + I R+G A DNFW G TGPCGPC+EI
Sbjct: 124 DRLLVTVYATDDEAFDIWEKEVGVPADRIVRIGDNKGAPYASDNFWAMGDTGPCGPCTEI 183
Query: 217 YYDFHPD-----RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLE 271
+YD H D R S + GD RFIE +N+VFMQ+N++ DG++EPL + ++DTG+GLE
Sbjct: 184 FYD-HGDHIWGGRPGSPEEDGD--RFIEIWNVVFMQFNRQADGTMEPLPRPSVDTGMGLE 240
Query: 272 RIARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSD 331
RI+ I+Q V +NYE D+ +IKKA+E+ + D +N +L++I DH+R+ +L++D
Sbjct: 241 RISAIMQGVHSNYEIDIFQALIKKAAEIVG-----TTDLSNQSLRVIADHIRSCAFLVAD 295
Query: 332 GVFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDV 391
GV PSN GRGYV+RR+IRRAVR GR LG + F AE A+++ + +++
Sbjct: 296 GVMPSNEGRGYVLRRIIRRAVRHGRKLGAT-------DVFFYKLAAELAVQMK-DVAAEL 347
Query: 392 KAREQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDT 451
A+ + L+ EE +FV+TL+RG LL+ DAL+ ++ +P G+ F LYDT
Sbjct: 348 IAQLPLVERVLRIEEEQFVRTLDRGLLLLE----DALANLGDAKVIP---GEVVFKLYDT 400
Query: 452 FGFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTE 511
+GFP ++T +V E + +D +GF EME QR +++ A ++ ++ ++ L + P
Sbjct: 401 YGFPADLTADVVREREIGIDEEGFKAEMEKQRARAKEA-SSFGVNYNEMLKLDFETP--- 456
Query: 512 FLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQG 571
F GY TL+ + V + + V + G + ++L TPFYAESGGQIGD G L V G
Sbjct: 457 FTGYKTLTERTRVVGIYKGVEEVSGLIAGDEAVIVLEETPFYAESGGQIGDSGTLKVDDG 516
Query: 572 TNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLL 631
+ V D K+ G +HKG + G LE G EVEA+VD RQ ++H+ THLL
Sbjct: 517 ------IFAVTDTLKA-GKAIIHKGYMELGTLEKGAEVEAVVDGDRRQAIALNHSVTHLL 569
Query: 632 QAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKV 691
AAL++ +G+ +Q GSLV +R+RFDF+ L + +E L+N I + + T++
Sbjct: 570 HAALRQALGEHVTQKGSLVGAERMRFDFSHFEGLTMATIRRVEELVNNQIRANHEITTQL 629
Query: 692 MALDDAKRAGAIAMFGEKYGEQVKI 716
M L+ AK AGA+A+FGEKY + V++
Sbjct: 630 MDLEAAKSAGAMALFGEKYEDDVRV 654
>gi|384432009|ref|YP_005641369.1| alanyl-tRNA synthetase [Thermus thermophilus SG0.5JP17-16]
gi|333967477|gb|AEG34242.1| alanyl-tRNA synthetase [Thermus thermophilus SG0.5JP17-16]
Length = 882
Score = 551 bits (1421), Expect = e-154, Method: Compositional matrix adjust.
Identities = 314/679 (46%), Positives = 426/679 (62%), Gaps = 46/679 (6%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPED-PTVLLTIAGMLQFKPIFLGKVP----RQVPRAA 107
IR++FL F+ +GH LPS SL+PED P++L T AGM KP FLG P ++ R
Sbjct: 6 IREKFLSFFEGKGHLRLPSFSLIPEDDPSLLFTSAGMAPLKPYFLGAKPIFFGKEWRRIT 65
Query: 108 TSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
T Q C+R D+ENVGRTSRH+T+FEMLGNFSFGDYFKKEAI WAWEF T L RLW
Sbjct: 66 TCQECLRVGDIENVGRTSRHNTYFEMLGNFSFGDYFKKEAILWAWEFLTEHLKLDPERLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGA-----TGPCGPCSEIYYDFHP 222
++V+EDDDEA+ IW VGVP E I R G D+N+W GA GP GPCSEI+YD P
Sbjct: 126 VTVFEDDDEAYGIWRDLVGVPEEKIGRFGEDENYWPGGAITHGPNGPSGPCSEIFYDRGP 185
Query: 223 DRGCSD---VDLGDDTRFIEFYNLVFMQYNKK----DDGSLEPLKQKNIDTGLGLERIAR 275
G D + G RF+E +NLVF QY+++ G L+PL QKNIDTG+GL R+A
Sbjct: 186 AYGTPDETGPNTGSGDRFVEIWNLVFTQYDRQGPIPGPGILKPLPQKNIDTGMGLYRVAA 245
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
ILQ V + Y TD FP+I++ + ++ Y + +++ ++I DH+RA+V LSDG
Sbjct: 246 ILQDVEDFYRTDTFFPLIQEVARMSGRPY---EGKASVSHRVIADHVRAVVAALSDGATF 302
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN GRGYV+RRL+RRA+R G LLG L FL +A L +++
Sbjct: 303 SNTGRGYVIRRLLRRALRHGYLLG--------LSDPFLHRLAPLVAGLLGDFYPEMRENL 354
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
+ ++++ EE RF++TLE G K LD +L+ + G V L G++AF LYDT+GFP
Sbjct: 355 PAVEKQIRLEEERFLETLEGGLKRLDALLSGL-----KPGEV--LPGKEAFRLYDTYGFP 407
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKI----PDTE 511
+++T E+A E G VD +GF ME Q+ +S+AA + A + E++ TE
Sbjct: 408 LDLTVEIAAERGYGVDTEGFQKAMEEQQSRSRAAMAFEREIFKKGAQVLEELYAERGATE 467
Query: 512 FLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQG 571
FLGY+ L A+A V +LL + +++ G++V+V+L++TPFYAE GGQIGD+G L G
Sbjct: 468 FLGYNALEAEAEVLALLAGDQSLLEAGPGTEVQVVLDKTPFYAEGGGQIGDFGVLEWPGG 527
Query: 572 TNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLL 631
+ V+ KK+ +F+HK + EGVL VG V A+VDPK R+ + +HTATHLL
Sbjct: 528 RAR------VETTKKTERGIFLHKARVEEGVLRVGERVRAVVDPK-RRDTERNHTATHLL 580
Query: 632 QAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKV 691
AAL+ V+G QAGSLVA DRLRFDF PL ELE +E L+N WI + +
Sbjct: 581 HAALRAVLGPHVRQAGSLVAPDRLRFDFTHPEPLKPEELERVELLVNRWIMADFPVTWRY 640
Query: 692 MALDDAKRAGAIAMFGEKY 710
M L++A++ GA+A+FGEKY
Sbjct: 641 MPLEEARKEGAMALFGEKY 659
>gi|239503494|ref|ZP_04662804.1| alanyl-tRNA synthetase [Acinetobacter baumannii AB900]
Length = 878
Score = 551 bits (1421), Expect = e-154, Method: Compositional matrix adjust.
Identities = 299/682 (43%), Positives = 429/682 (62%), Gaps = 48/682 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FL ++ ++GH + S+SLVP DPT+L T AGM QFK FLG R RA TSQ+
Sbjct: 6 IREAFLRYFETQGHTRVASSSLVPANDPTLLFTNAGMNQFKDCFLGLEKRDYVRATTSQK 65
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND++NVG T+RHHTFFEMLGNFSFGDYFK++A+++AWEF T E LP ++
Sbjct: 66 CVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKRDALKFAWEFLTSEQWLALPKDK 125
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
L+++VY DDEA++IWNKE+G+ E I R+G A DNFW G TGPCGPCSEI++
Sbjct: 126 LYVTVYHTDDEAYDIWNKEIGLAPERIIRIGDNKGEKYASDNFWAMGDTGPCGPCSEIFF 185
Query: 219 DF--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARI 276
D H G D RFIE +N VFMQ+N+ DG L PL ++DTG+GLERI+ +
Sbjct: 186 DHGEHIWGGLPGSPEEDGDRFIEIWNNVFMQFNRTADGVLHPLPAPSVDTGMGLERISAV 245
Query: 277 LQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPS 336
LQ V +NY+ DL ++K A+ + + D +L+++ DH R+ +L++DGV PS
Sbjct: 246 LQHVNSNYDIDLFQHLLKAAANIIGIE-----DEGQPSLRVVADHARSCCFLIADGVNPS 300
Query: 337 NIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQ 396
N GRGYV+RR+IRRAVR G LG G F + + IE+ +++AR +
Sbjct: 301 NEGRGYVLRRIIRRAVRHGNKLGATG--------TFFYKMLQPLIEVMGQAYPELEARRE 352
Query: 397 RILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPV 456
I L REE +F +TLE+G KLL+ LA +T + G F LYDT+GFP
Sbjct: 353 VIEATLIREEEQFAKTLEQGLKLLEGELAQLKDKT--------IPGATVFKLYDTYGFPT 404
Query: 457 EITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYD 516
++T ++A E G +D GF++EM QR Q A +A K +VD + ++ + +T+F GY
Sbjct: 405 DLTADIARERGFIIDEAGFEVEMAAQR---QRARDAGKFAVDYN-NIVKVEGETQFDGYT 460
Query: 517 TLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQT 576
+ + + ++ +G V +VS+G + ++LN+TPFYAESGGQIGD G +T
Sbjct: 461 NTTGQGQIVAIYKDGVQVDEVSEGDEALIVLNQTPFYAESGGQIGDTGIF------KNET 514
Query: 577 AVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALK 636
+ EV+D KKS G FVH+G + G L+ + VEAIV +R+ +H+ATHLL AAL+
Sbjct: 515 GIFEVQDTKKS-GGAFVHQGIVTVGNLKTSQNVEAIVKADIREATARNHSATHLLHAALR 573
Query: 637 KVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDD 696
+++G Q GSLVA D LRFDF +P+ +L+++ERL+N I + T+++ ++
Sbjct: 574 QILGSHVQQKGSLVASDILRFDFANDQPVSFEQLQQVERLVNAEIIANTAVTTELLDIET 633
Query: 697 AKRAGAIAMFGEKYGEQVKISS 718
AK GA+ +FGEKYG++V++ S
Sbjct: 634 AKAKGAMMLFGEKYGDEVRVLS 655
>gi|402756348|ref|ZP_10858604.1| alanyl-tRNA ligase [Acinetobacter sp. NCTC 7422]
Length = 891
Score = 551 bits (1421), Expect = e-154, Method: Compositional matrix adjust.
Identities = 302/692 (43%), Positives = 439/692 (63%), Gaps = 54/692 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FL ++ S+GH + S+SLVP DPT+L T AGM QFK FLG R RA +SQ+
Sbjct: 6 IREAFLRYFESQGHTRVASSSLVPANDPTLLFTNAGMNQFKDCFLGLEKRDYVRAVSSQK 65
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND++NVG T+RHHTFFEMLGNFSFGDYFK+ A+++AWEF T E GLP +R
Sbjct: 66 CVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKQNALKFAWEFLTSEQWLGLPKDR 125
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
L+++VY DDEAF+IWNKE+G+ E I R+G A DNFW G TGPCGPCSEI++
Sbjct: 126 LYVTVYHTDDEAFDIWNKEIGIDAERIIRIGDNKGGQYASDNFWAMGDTGPCGPCSEIFF 185
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D RFIE +N VFMQ+N+ DG + PL ++DTG+GLERI+
Sbjct: 186 D-HGDHIWGGLPGTPEEDGDRFIEIWNNVFMQFNRTADGVMHPLPAPSVDTGMGLERISA 244
Query: 276 ILQKVPNNYETDLIFPIIKKASELANV------SYAQSNDRT---NLNLKIIGDHLRAIV 326
+LQ V +NYE DL ++K A+++ + + A++ ++ +LK+I DH R+
Sbjct: 245 VLQHVNSNYEIDLFQHLLKAAADIIGLDTTAIEAEAKAQNKPVEYPASLKVIADHARSCS 304
Query: 327 YLLSDGVFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTH 386
+L++DGV PSN GRGYV+RR+IRRAVR G LG G +F + + IE+
Sbjct: 305 FLIADGVNPSNEGRGYVLRRIIRRAVRHGNKLGATG--------SFFYKMLQPLIEVMGD 356
Query: 387 IDSDVKAREQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAF 446
++ A++ RI +L +EE +F +TLE+G KLL+ LA + G+V + G+ F
Sbjct: 357 AYPELAAQQARIEAQLLKEEEQFAKTLEQGLKLLEGELA------QLKGTV--IPGETVF 408
Query: 447 LLYDTFGFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEK 506
LYDT+GFP ++T ++A E +++D GF++EM QR Q A +A K +VD ++ + +
Sbjct: 409 KLYDTYGFPTDLTADIARERDLTIDEAGFEVEMAAQR---QRARDAGKFAVDYNS-IVKV 464
Query: 507 IPDTEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFL 566
+T+F GYD + + ++ +G V ++++G + ++LN+TPFYAESGGQIGD G
Sbjct: 465 EGETQFDGYDATQGQGQIVAIYKDGVQVDEINEGDEALIVLNQTPFYAESGGQIGDTGLF 524
Query: 567 YVTQGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHT 626
T + EV+D KKS G FVH+G + G L+ + V+A V +R +H+
Sbjct: 525 ------KNDTGIFEVQDTKKS-GGAFVHQGIVTMGNLKATQNVDATVKADIRAATARNHS 577
Query: 627 ATHLLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANL 686
ATHLL AAL++++G Q GSLVA D LRFDF +P+ +L++IERL+N +
Sbjct: 578 ATHLLHAALRQILGAHVQQKGSLVASDILRFDFANDQPVSFEQLQQIERLVNAEVIANTA 637
Query: 687 LQTKVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+ T+++ ++ AK GA+ +FGEKYGE+V++ S
Sbjct: 638 VSTELLDIETAKAKGAMMLFGEKYGEEVRVLS 669
>gi|410638086|ref|ZP_11348651.1| alanyl-tRNA synthetase [Glaciecola lipolytica E3]
gi|410142283|dbj|GAC15856.1| alanyl-tRNA synthetase [Glaciecola lipolytica E3]
Length = 865
Score = 551 bits (1421), Expect = e-154, Method: Compositional matrix adjust.
Identities = 306/672 (45%), Positives = 423/672 (62%), Gaps = 42/672 (6%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLD++A+ GH+++ S+SLVP +DPT+L T AGM QFK +FLG R+ +A +SQR
Sbjct: 8 IRRAFLDYFANHGHQIVSSSSLVPADDPTLLFTNAGMNQFKDVFLGTETRRYNKATSSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AIQ AW+F T LP +L
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQQAIQHAWKFLTEVLELPKEKLL 127
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDF--HPDRG 225
++++ +DDEAF+IWNKE+G+P + I R+ DNFW+ G TGPCGPCSEI+YD H G
Sbjct: 128 VTIFHEDDEAFDIWNKEIGLPADKIIRIATSDNFWSMGDTGPCGPCSEIFYDHGEHIWGG 187
Query: 226 CSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYE 285
D RFIE +NLVFMQ+N+ DG + PL + +IDTG+GLERI+ I+Q V +NYE
Sbjct: 188 PPGTPEEDGDRFIEIWNLVFMQFNRTADGVMHPLPKPSIDTGMGLERISAIMQNVHSNYE 247
Query: 286 TDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVR 345
D+ +I A+++ S D + +L++I DH+R+ +L+ DGV PSN GRGYV+R
Sbjct: 248 IDIFQKLIAAAAQIVG-----STDLEDKSLRVIADHIRSCAFLVCDGVMPSNEGRGYVLR 302
Query: 346 RLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEE-LKR 404
R+IRRAVR G LG K L + E EL ++ +LE+ LK
Sbjct: 303 RIIRRAVRHGYQLGAKDIFFYKLIDELCNQMGEAYPEL---------IEQKPVLEKVLKV 353
Query: 405 EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAE 464
EE +F +TLERG +L++ L T SG V + G+ AF LYDT+GFP ++T +VA
Sbjct: 354 EEEQFSRTLERGMTILNEAL------TELSGDV--VPGELAFKLYDTYGFPADLTNDVAR 405
Query: 465 EHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTLSAKAIV 524
E G S+D +GFD M QR ++Q A N K D D +EFLGYD + A V
Sbjct: 406 EKGFSIDQEGFDRAMTQQRERAQQASNFGK----DYNDAIFAKSASEFLGYDAENNSAEV 461
Query: 525 ESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDV 584
L PV ++ G V+L++T FYAESGGQ+GD G L ++A +V D
Sbjct: 462 VELFDQNGPVNEIKAGDSGIVVLSKTAFYAESGGQVGDTGTLI------GESAEFKVVDT 515
Query: 585 KKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETS 644
K L HKG + + ++G VEA ++ + R K++H+ATHL+ AALK V+G +
Sbjct: 516 VK-LNDAVAHKGVAQRNI-KIGDVVEAQIESERRAAIKLNHSATHLMHAALKTVLGDHVN 573
Query: 645 QAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIA 704
Q GSLV +RLRFDF+ + +L EIE L+N I + L+TK+M L++AK AGA+A
Sbjct: 574 QKGSLVDAERLRFDFSHFEAVTQQQLLEIETLVNQQIRLNHSLETKLMGLEEAKNAGAMA 633
Query: 705 MFGEKYGEQVKI 716
+FGEKY + V++
Sbjct: 634 LFGEKYDDSVRV 645
>gi|118581577|ref|YP_902827.1| alanyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
gi|205830173|sp|A1ATU9.1|SYA_PELPD RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|118504287|gb|ABL00770.1| alanyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
Length = 878
Score = 551 bits (1421), Expect = e-154, Method: Compositional matrix adjust.
Identities = 293/685 (42%), Positives = 420/685 (61%), Gaps = 44/685 (6%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
+G IR+RFL F+A RGH ++PS+ ++P+ DPT++ AGM QFK FLG R RA
Sbjct: 2 TGSEIRRRFLTFFAERGHTIVPSSGIIPKNDPTLMFANAGMNQFKDCFLGMEKRDYTRAC 61
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
+SQ+C+R ND+ENVGRT+RHHTFFEMLGNFSFGDYFKKEAI +AWEF T + L
Sbjct: 62 SSQKCVRAGGKHNDLENVGRTARHHTFFEMLGNFSFGDYFKKEAIAFAWEFLTRDLKLDK 121
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPD 223
NRL++SVY DD EA +IW+++ GVP+E I R G DNFW+ G TGPCGPCSEI+YD
Sbjct: 122 NRLYVSVYTDDQEAADIWHQQEGVPLERIFRFGEKDNFWSMGDTGPCGPCSEIFYDQGEA 181
Query: 224 RGCS--DVDLGDDT-RFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKV 280
GC D +G D R++E +N VFMQ+++ DG L PL + ++DTG+GLERI+ ++Q V
Sbjct: 182 AGCGSPDCTVGCDCDRYMEIWNNVFMQFDRSTDGVLTPLPKPSVDTGMGLERISAVMQGV 241
Query: 281 PNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGR 340
+NY+TDLI II+ L+ +Y + ++R ++++++I DH RA+ +L+ DG PSN GR
Sbjct: 242 TSNYDTDLIQGIIRHVERLSGKTYGK-DERDDVSMRVIADHARAVTFLICDGALPSNEGR 300
Query: 341 GYVVRRLIRRAVRTGRLLGIKG-------DGRGNLEGAFLPSIAEKAIELSTHIDSDVKA 393
GYV+RR++RRA R ++LG+ D ++ GA P + E
Sbjct: 301 GYVLRRIMRRAARHAKMLGLADPMLCHMVDAVRDMMGAAYPELVE--------------- 345
Query: 394 REQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFG 453
RE+ I + + EE RF +TL+RG ML D ++R R +GS + G F LYDT+G
Sbjct: 346 REEYIKKVILAEEQRFAETLDRGLA----MLNDEVARMRAAGSTV-IPGDVLFRLYDTYG 400
Query: 454 FPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSA--DLAEKIPDTE 511
FP+++T ++ E G ++D GF+ ME QR Q++ +L + E
Sbjct: 401 FPIDLTADIVESEGFTIDEAGFEQCMERQREQAREHWKGSGAEGIGRVYKELYSRGIRGE 460
Query: 512 FLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQG 571
F+GYD LSA + V +++ +G V + G +E++ TPFY ESGGQ GD G ++ G
Sbjct: 461 FVGYDGLSALSPVLAIIRDGVEVESATAGETIELVTESTPFYGESGGQKGDCG--SISTG 518
Query: 572 TNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLL 631
+ +EV + + VH T+REG++ G + V R +HTATHLL
Sbjct: 519 NSH----LEVSGASRPYSDLIVHHATVREGIIRKGDGADLRVSRPERSATARNHTATHLL 574
Query: 632 QAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKV 691
QAAL++V+G+ QAGSLV+ DRLRFDF + E+ +E L+NG++ D +
Sbjct: 575 QAALRRVLGEHVKQAGSLVSPDRLRFDFIHFTAMTTEEIRRVETLVNGFVMDNQPVVITQ 634
Query: 692 MALDDAKRAGAIAMFGEKYGEQVKI 716
M + A AGA A+F EKYG+ V++
Sbjct: 635 MDMASAIEAGATALFDEKYGDNVRV 659
>gi|330839006|ref|YP_004413586.1| alanyl-tRNA synthetase [Selenomonas sputigena ATCC 35185]
gi|329746770|gb|AEC00127.1| alanyl-tRNA synthetase [Selenomonas sputigena ATCC 35185]
Length = 874
Score = 551 bits (1421), Expect = e-154, Method: Compositional matrix adjust.
Identities = 303/676 (44%), Positives = 429/676 (63%), Gaps = 32/676 (4%)
Query: 49 SGDSIRKRFLDFYA-SRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRA 106
+G+ +R+ +L F+A +GH LPSASL+P DPT+L+ AGM FKP F GK+ R
Sbjct: 5 TGNELREAYLQFFAEKKGHLRLPSASLIPANDPTLLMIGAGMAPFKPFFTGKMKPPRTRI 64
Query: 107 ATSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRL 166
TSQRC+RT D+ENVGRT+RH T+FEMLGNFSFGDYFKKEAI WAWEF T LP +L
Sbjct: 65 TTSQRCVRTGDIENVGRTARHQTYFEMLGNFSFGDYFKKEAIPWAWEFLTDVLDLPKEKL 124
Query: 167 WISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGC 226
W++VY DDEA IW ++ G P +HI ++ DDNFW G GPCGP SEIY D +RGC
Sbjct: 125 WVTVYPKDDEAAAIWREQPGFPQDHIVKL--DDNFWEIG-PGPCGPDSEIYIDLGEERGC 181
Query: 227 SDVDLG---DDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNN 283
D D R++E +NLVF Q+++ +DG PL+ KNIDTG GLER+A +LQ N
Sbjct: 182 GSPDCAVGCDCDRYLEIWNLVFTQFDRTEDGQYNPLEHKNIDTGCGLERLASVLQNKKTN 241
Query: 284 YETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYV 343
+ETDL+FPII+ AS+++ V Y + N +++LK+I DH R++ ++ DG+ PSN GRGYV
Sbjct: 242 FETDLLFPIIEYASKVSGVVYGE-NAEKDVSLKVIADHARSMAIMIMDGILPSNEGRGYV 300
Query: 344 VRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELK 403
+RR++RRAVR GR+LGI LEGA + ++AE I ++ +++ I + +
Sbjct: 301 LRRILRRAVRHGRILGIHDK---FLEGA-IDAVAE--IYKGAADFEELAEKKEYIKKVIS 354
Query: 404 REELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVA 463
EE RF TL +G +LL+ + D RE V L G+ F LYDT+GFP E+T E+
Sbjct: 355 IEEDRFAATLAQGMELLNGHIEDL---KREGKKV--LPGEIGFKLYDTYGFPWEVTDEIL 409
Query: 464 EEHGVSVDMKGFDIEMENQRRQSQAAHNA-VKLSVDDSADLAEKIPDTEFLGYDTLSAKA 522
E+ + +D F+ ME QR +++AA +++V D + + DT L D + ++
Sbjct: 410 HENEMELDKDSFEKAMEEQRERARAARQENQRVAVPDLSGI-----DTSHLCVDENAKES 464
Query: 523 IVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVK 582
V ++ +G V +++ G + ++L TPFYAE GGQ+GD G L G V+V
Sbjct: 465 TVVAIWKDGVLVDELADGEEAGIILQSTPFYAEGGGQVGDAGLLETEFGR------VQVA 518
Query: 583 DVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQE 642
+ KK H G + EG+L+VG V +D + + +HTATHLLQAALK+V+G +
Sbjct: 519 NAKKLPDGTVYHIGYVEEGMLKVGDHVSIRIDWMKKLSSARNHTATHLLQAALKRVVGDQ 578
Query: 643 TSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGA 702
+QAGSLV +RLRFDF+ P+ +L+E+ERL+N I A ++ M +D AK+ GA
Sbjct: 579 VNQAGSLVMPERLRFDFSNFEPVTALQLQEVERLVNEQILMAKPVEIAQMEIDKAKKLGA 638
Query: 703 IAMFGEKYGEQVKISS 718
+A+FGEKYG+ V++ S
Sbjct: 639 MALFGEKYGDVVRVVS 654
>gi|402566787|ref|YP_006616132.1| alanyl-tRNA synthetase [Burkholderia cepacia GG4]
gi|402247984|gb|AFQ48438.1| alanyl-tRNA synthetase [Burkholderia cepacia GG4]
Length = 874
Score = 551 bits (1420), Expect = e-154, Method: Compositional matrix adjust.
Identities = 298/679 (43%), Positives = 424/679 (62%), Gaps = 44/679 (6%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR++FL F+ S+GH ++ S+SLVP DPT++ T +GM+QFK +FLG PR RA T+QR
Sbjct: 6 IREKFLKFFESKGHTIVRSSSLVPGNDPTLMFTNSGMVQFKDVFLGTDPRPYSRATTAQR 65
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AI++AWE T + LP ++LW
Sbjct: 66 SVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIKFAWELLTTVYQLPKDKLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYYDF 220
++VY++DDEA++IW KEVGVP E I R+G A DNFW G TGPCGPC+EI+YD
Sbjct: 126 VTVYQEDDEAYDIWAKEVGVPTERIIRIGDNKGARYASDNFWTMGDTGPCGPCTEIFYDH 185
Query: 221 HPD--RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQ 278
PD G D R+IE +NLVFMQ+N+ G++ L ++++DTG+GLER+A +LQ
Sbjct: 186 GPDVWGGPPGSPEEDGDRYIEIWNLVFMQFNRDAQGNMTRLPKQSVDTGMGLERLAAVLQ 245
Query: 279 KVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNI 338
V +NYE DL +IK A+ + +S D N +LK+I DH+RA +L+ DGV P N
Sbjct: 246 HVHSNYEIDLFQNLIKAAARVTEIS-----DLNNNSLKVIADHIRACSFLIVDGVIPGNE 300
Query: 339 GRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRI 398
GRGYV+RR++RRA+R G LG KG F +A+ E+ ++K EQR+
Sbjct: 301 GRGYVLRRIVRRAIRHGYKLGRKGS-------FFHKLVADLVAEMGAAY-PELKEAEQRV 352
Query: 399 LEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEI 458
+ L++EE RF +T+E G +L+ LAD ++ G V L G+ AF L+DT+GFP+++
Sbjct: 353 TDVLRQEEERFFETIEHGMSILEAALADVEAK---GGKV--LDGELAFKLHDTYGFPLDL 407
Query: 459 TKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTL 518
T +V E G++VD FD M QR Q++AA + L T F GY+ +
Sbjct: 408 TADVCRERGMTVDEPAFDDAMARQREQARAAGK-----FKAAQGLEYSGAKTTFHGYEEI 462
Query: 519 S-AKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTA 577
+ A + +L V+G V +V G D V+L+ TPFYAESGGQ+GD G L N T
Sbjct: 463 AFDDAKIVALYVDGASVNEVKHGQDAVVVLDHTPFYAESGGQVGDQGVL-----ANAATR 517
Query: 578 VVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKK 637
V D K V H GT+ +G L++G + A +D R R + +H+ATHL+ AL+
Sbjct: 518 FA-VADTLKVQADVIGHHGTLEQGTLKIGDVLRAEIDAHRRARTQRNHSATHLMHKALRD 576
Query: 638 VIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDA 697
V+G Q GSLV ++ RFDF + P+ D E+ +E+++N I +V+ D+A
Sbjct: 577 VLGAHVQQKGSLVDAEKTRFDFAHNAPMSDDEIRRVEQIVNNEILANAPGIVRVLPYDEA 636
Query: 698 KRAGAIAMFGEKYGEQVKI 716
+ GA+A+FGEKYG++V++
Sbjct: 637 VKGGAMALFGEKYGDEVRV 655
>gi|429120426|ref|ZP_19181103.1| Alanyl-tRNA synthetase [Cronobacter sakazakii 680]
gi|426325169|emb|CCK11840.1| Alanyl-tRNA synthetase [Cronobacter sakazakii 680]
Length = 875
Score = 551 bits (1420), Expect = e-154, Method: Compositional matrix adjust.
Identities = 318/689 (46%), Positives = 435/689 (63%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTAQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP +R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQYAWELLTGEQWFNLPKDR 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NYE DL +IK +ANV+ A D +N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYEIDLFQKLIKA---VANVTGA--TDLSNKSLRVIADHIRSCAFLIADGVIP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRA+R G +LG K F + +++ ++K ++
Sbjct: 302 SNENRGYVLRRIIRRAIRHGNMLGAKD--------TFFYKLVGPLVDVMGAAGEELKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ L+ T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELSKLTGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQ------AAHNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRARESSGFGADYNAM-IRVDGA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD A V +L V+GK V +V+ G V+L+ TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDHTELTAKVTALFVDGKSVEQVTAGQQAVVVLDETPFYAESGGQVGDKGELKGN 515
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
T V D +K G H G + GVL+VG V+A VD R R +++H+ATH
Sbjct: 516 GFT------FTVNDTQK-YGQAIGHIGELASGVLKVGEGVKAEVDHARRDRIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G +Q GSLV LRFDF+ + E+ ++E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVAQKGSLVNDKGLRFDFSHFEAMKPEEIRKVEDLVNAQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
VM L+ AK GA+A+FGEKY ++V++ S
Sbjct: 629 NVMDLETAKAKGAMALFGEKYEDRVRVLS 657
>gi|389839827|ref|YP_006341911.1| alanyl-tRNA synthetase [Cronobacter sakazakii ES15]
gi|387850303|gb|AFJ98400.1| alanyl-tRNA synthetase [Cronobacter sakazakii ES15]
Length = 875
Score = 551 bits (1420), Expect = e-154, Method: Compositional matrix adjust.
Identities = 318/689 (46%), Positives = 435/689 (63%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTAQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP +R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQYAWELLTGEQWFNLPKDR 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NYE DL +IK +ANV+ A D +N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYEIDLFQKLIKA---VANVTGA--TDLSNKSLRVIADHIRSCAFLIADGVIP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRA+R G +LG K F + +++ ++K ++
Sbjct: 302 SNENRGYVLRRIIRRAIRHGNMLGAKD--------TFFYKLVGPLVDVMGAAGEELKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ L+ T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELSKLTGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQ------AAHNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRARESSGFGADYNAM-IRVDGA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD A V +L V+GK V +V+ G V+L+ TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDHTELTAKVTALFVDGKSVEQVTAGQQAVVVLDETPFYAESGGQVGDKGELKGN 515
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
T V D +K G H G + GVL+VG V+A VD R R +++H+ATH
Sbjct: 516 GFT------FTVNDTQK-YGQAIGHIGELASGVLKVGEGVKAEVDHARRDRIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G +Q GSLV LRFDF+ + E+ ++E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVAQKGSLVNDKGLRFDFSHFEAMKPEEIRKVEDLVNAQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
VM L+ AK GA+A+FGEKY ++V++ S
Sbjct: 629 NVMDLEAAKAKGAMALFGEKYEDRVRVLS 657
>gi|256822655|ref|YP_003146618.1| alanyl-tRNA synthetase [Kangiella koreensis DSM 16069]
gi|256796194|gb|ACV26850.1| alanyl-tRNA synthetase [Kangiella koreensis DSM 16069]
Length = 875
Score = 551 bits (1420), Expect = e-154, Method: Compositional matrix adjust.
Identities = 295/680 (43%), Positives = 420/680 (61%), Gaps = 43/680 (6%)
Query: 51 DSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATS 109
+ IR FL F+ ++GH ++ S+ L+P DPT+L T AGM+QFK FLG R RA +S
Sbjct: 4 NQIRNAFLTFFENKGHHIVDSSPLIPANDPTLLFTNAGMVQFKDCFLGIDKRSYTRATSS 63
Query: 110 QRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANR 165
QRC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFKKEAI + WE T EF LP +
Sbjct: 64 QRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKKEAIAYCWELLTEEFKLPKEK 123
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE+DDEAF+IW ++G P + I R+G A DNFW G TGPCGPCSE++Y
Sbjct: 124 LWVTVYEEDDEAFDIWVNDIGFPADRISRIGDNKGERYASDNFWAMGDTGPCGPCSEVFY 183
Query: 219 DFHPD--RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARI 276
D + G D RFIE +NLVFMQ+N++ DG++E L + ++DTG+GLERIA I
Sbjct: 184 DHGEEIWGGPPGTPEEDGDRFIEIWNLVFMQFNRQKDGTMERLPKPSVDTGMGLERIAAI 243
Query: 277 LQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPS 336
LQ V +NYE DL +IK ++L V D N +L++I DH+R+ +L+ DG+ PS
Sbjct: 244 LQGVHSNYEIDLFQHLIKSTADLLKV-----KDLDNKSLRVIADHIRSCAFLILDGIVPS 298
Query: 337 NIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQ 396
N GRGYV+RR++RRAVR G LG K G F + + IE+ + +++
Sbjct: 299 NEGRGYVLRRIVRRAVRHGHQLGAK--------GIFFAKLVQPLIEVMGEAYPALVEQKE 350
Query: 397 RILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPV 456
I + L +EE F +TL++G +LDQ +AD + ++ +SG F LYDT+GFP
Sbjct: 351 LIEKVLAKEEEAFARTLDKGMLILDQDIADLVETNGKT-----ISGDTVFKLYDTYGFPQ 405
Query: 457 EITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYD 516
++T ++A E G+ VD GF+ M QR +++AA N +D+ + E+ +EF GY
Sbjct: 406 DLTADIAREKGLEVDWDGFEKAMNQQRERARAASN-FGTDYNDNFSIDER---SEFTGYH 461
Query: 517 TLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQT 576
+V LL V ++ +G V+L +TPFYAE+GGQ+GD G L+
Sbjct: 462 YTQQNVVVTRLLKGEDEVKELDQGEKGVVILAKTPFYAEAGGQVGDTGRLFGC------G 515
Query: 577 AVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALK 636
A V+D +K LG H G ++ G E+ A VD + RQ +H+ATHLL AAL+
Sbjct: 516 ATFIVEDTQK-LGDAIAHIGYVQRGSFSNDAELTAEVDAERRQHTMRNHSATHLLHAALR 574
Query: 637 KVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDD 696
++G +Q GSLV +RLRFDF+ P+ +L +IE L+N I + + ++ M++D+
Sbjct: 575 DILGTHVTQKGSLVGPERLRFDFSNPEPVTQEQLRQIEALVNQKIYENHAVEAATMSMDE 634
Query: 697 AKRAGAIAMFGEKYGEQVKI 716
AK GA+A+FGEKYG++V++
Sbjct: 635 AKEHGAMALFGEKYGDEVRV 654
>gi|393757555|ref|ZP_10346379.1| alanyl-tRNA ligase [Alcaligenes faecalis subsp. faecalis NCIB 8687]
gi|393165247|gb|EJC65296.1| alanyl-tRNA ligase [Alcaligenes faecalis subsp. faecalis NCIB 8687]
Length = 875
Score = 551 bits (1420), Expect = e-154, Method: Compositional matrix adjust.
Identities = 296/678 (43%), Positives = 425/678 (62%), Gaps = 44/678 (6%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR++FL F+ S+GH ++ SASLVP DPT+L T AGM+QFK +F GK R RA +SQR
Sbjct: 6 IRQKFLSFFESKGHHIVSSASLVPGNDPTLLFTNAGMVQFKDVFTGKETRPYNRATSSQR 65
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI++AWE T + LPA +LW
Sbjct: 66 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAIRYAWELLTTVYKLPAEKLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYYDF 220
++VY++DDEA++IW E+GVP E I R+G DNFW TGPCGPCSEI+YD
Sbjct: 126 VTVYQEDDEAYDIWASEIGVPKERIIRIGDKGGVRYNSDNFWQMADTGPCGPCSEIFYDH 185
Query: 221 HPD--RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQ 278
PD G D R+IE +NLVFMQ+ + DG++ PL + +DTG+GLERI+ +LQ
Sbjct: 186 GPDVWGGPPGSPEEDGDRYIEVWNLVFMQFERSADGTMTPLPKPCVDTGMGLERISAVLQ 245
Query: 279 KVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNI 338
V +NYE DL +I+ A+ +++D +N +LK+I DH+RA +L+ DGV PSN
Sbjct: 246 HVHSNYEIDLFQSLIQAAAR-----ETKTSDLSNNSLKVIADHIRACSFLIIDGVIPSNE 300
Query: 339 GRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRI 398
GRGYV+RR+IRRA+R G LG K G F + + + ++ ++ +RI
Sbjct: 301 GRGYVLRRIIRRALRHGHKLGQK--------GLFFYRLVQDLGLVMGEAYPELISQRERI 352
Query: 399 LEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEI 458
+ L++EE RF +TLE G ++L+ L + + +L GQ F LYDT+GFPV++
Sbjct: 353 EQVLRQEEERFSETLENGMRILEGALVNLPANA-------KLDGQTLFTLYDTYGFPVDL 405
Query: 459 TKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTL 518
T ++ E G+ VD+ GF++ MENQR+ ++A+ + L+ T F GY TL
Sbjct: 406 TADICRERGIEVDLDGFEVAMENQRQMARASGK-----FKTAEGLSYSGVQTRFDGYTTL 460
Query: 519 SAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAV 578
V +L V+G V V+ G V+L+ TPFYAESGGQ+GD G L G +
Sbjct: 461 EGSGTVTALYVDGTSVQSVTPGQQAVVVLDATPFYAESGGQVGDAGILSDAAGLS----- 515
Query: 579 VEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKV 638
EV+D +K VF H+G + G L VG+ V+A VD + R+R +H+ATHL+ AL++V
Sbjct: 516 FEVQDTQKISNQVFGHQGVLNAGTLTVGQTVQAQVDTERRERVIRNHSATHLMHKALRQV 575
Query: 639 IGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAK 698
+G Q GSLV ++ RFDF + ++ ++E ++N + +Q ++M+ DDA
Sbjct: 576 LGGHVQQRGSLVDAEKTRFDFAHDAAMTAEQIAQVEAIVNEQVLANQAVQAQLMSFDDAV 635
Query: 699 RAGAIAMFGEKYGEQVKI 716
GA+A+FGEKYG++V++
Sbjct: 636 SGGAMALFGEKYGDEVRV 653
>gi|221202097|ref|ZP_03575133.1| alanyl-tRNA synthetase [Burkholderia multivorans CGD2M]
gi|221204772|ref|ZP_03577789.1| alanyl-tRNA synthetase [Burkholderia multivorans CGD2]
gi|221175629|gb|EEE08059.1| alanyl-tRNA synthetase [Burkholderia multivorans CGD2]
gi|221178180|gb|EEE10591.1| alanyl-tRNA synthetase [Burkholderia multivorans CGD2M]
Length = 874
Score = 551 bits (1420), Expect = e-154, Method: Compositional matrix adjust.
Identities = 300/679 (44%), Positives = 420/679 (61%), Gaps = 44/679 (6%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR++FL F+ S+GH ++ S+SLVP DPT++ T +GM+QFK +FLG R RA T+QR
Sbjct: 6 IREKFLKFFESKGHTIVRSSSLVPGNDPTLMFTNSGMVQFKDVFLGTDRRPYTRATTAQR 65
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AI++AWE T + LP ++LW
Sbjct: 66 SVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIRFAWELLTTVYMLPKDKLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYYDF 220
++VY++DDEA++IW KEVGVP E I R+G A DNFW G TGPCGPC+EI+YD
Sbjct: 126 VTVYQEDDEAYDIWAKEVGVPTERIIRIGDNKGARYASDNFWTMGDTGPCGPCTEIFYDH 185
Query: 221 HPD--RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQ 278
P+ G D R+IE +NLVFMQ+N+ G++ L + +DTG+GLER+A +LQ
Sbjct: 186 GPEVWGGPPGSPEEDGDRYIEIWNLVFMQFNRDAQGNMTRLPKPCVDTGMGLERLAAVLQ 245
Query: 279 KVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNI 338
V +NYE DL +I+ A+ + V D N +LK+I DH+RA +L+ DGV P N
Sbjct: 246 HVHSNYEIDLFQNLIEAAARVTEV-----GDLNNNSLKVIADHIRACAFLIVDGVIPGNE 300
Query: 339 GRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRI 398
GRGYV+RR++RRA+R G LG K GAF + + ++K EQR+
Sbjct: 301 GRGYVLRRIVRRAIRHGYKLGRK--------GAFFHKLVADLVAEMGAAYPELKEAEQRV 352
Query: 399 LEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEI 458
+ L++EE RF +T+E G +L+ LAD ++ G V L G+ AF L+DT+GFP+++
Sbjct: 353 TDVLRQEEERFFETIEHGMSILESALADLEAK---GGKV--LDGELAFKLHDTYGFPLDL 407
Query: 459 TKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTL 518
T +V E GV+VD FD M QR Q++AA + L T F GY+ +
Sbjct: 408 TADVCRERGVTVDEPAFDDAMARQREQARAAGK-----FKAAQGLEYTGAKTTFHGYEEI 462
Query: 519 S-AKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTA 577
+ A V +L V+G V +V G D V+L+ TPFYAESGGQ+GD G L N T
Sbjct: 463 AFDDAKVVALYVDGSAVTEVKAGQDAVVVLDHTPFYAESGGQVGDQGVL-----ANASTR 517
Query: 578 VVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKK 637
V D K V H GT+ +G L+VG + A +D + R R + +H+ATHL+ AL++
Sbjct: 518 FA-VADTLKVQADVIGHHGTLEQGTLKVGDVLRAEIDAQRRARTQRNHSATHLMHKALRE 576
Query: 638 VIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDA 697
V+G Q GSLV D+ RFDF + PL D E+ +E+++N I +VM D+A
Sbjct: 577 VLGSHVQQKGSLVDADKTRFDFAHNAPLTDDEIRRVEQIVNDEILANAPGIVRVMPYDEA 636
Query: 698 KRAGAIAMFGEKYGEQVKI 716
+ GA+A+FGEKYG++V++
Sbjct: 637 VKGGAMALFGEKYGDEVRV 655
>gi|320449491|ref|YP_004201587.1| alanyl-tRNA synthetase [Thermus scotoductus SA-01]
gi|320149660|gb|ADW21038.1| alanyl-tRNA synthetase [Thermus scotoductus SA-01]
Length = 882
Score = 551 bits (1420), Expect = e-154, Method: Compositional matrix adjust.
Identities = 317/681 (46%), Positives = 425/681 (62%), Gaps = 48/681 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVP----RQVPRAA 107
IR+++L F+ +GH LPS SL+PE DP++L T AGM KP FLG P ++ R
Sbjct: 6 IREKYLSFFEGKGHLRLPSFSLIPENDPSLLFTSAGMAPLKPYFLGAKPIFGGKEWRRIT 65
Query: 108 TSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
T Q+C+R D+ENVGRT+RH+TFFEMLGNFSFGDYFKKEAI WAWEF T GL +R
Sbjct: 66 TCQKCLRVGDIENVGRTARHNTFFEMLGNFSFGDYFKKEAILWAWEFLTDPKWLGLDPDR 125
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGA-----TGPCGPCSEIYYDF 220
LW++VYEDDDEA+ IW VGVP E I R G D+N+W GA GP GPCSEI+YD
Sbjct: 126 LWVTVYEDDDEAYAIWRDLVGVPEEKIGRFGEDENYWPGGAITHGPNGPSGPCSEIFYDR 185
Query: 221 HPDRGCSD---VDLGDDTRFIEFYNLVFMQYNKK----DDGSLEPLKQKNIDTGLGLERI 273
P G D + G RF+E +NLVF QY+++ G L+PL QKNIDTG+GL R+
Sbjct: 186 GPAFGTPDETGPNTGSGDRFVEIWNLVFTQYDRQGPIPGPGILKPLPQKNIDTGMGLYRV 245
Query: 274 ARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGV 333
A ILQ V + Y TD +PII++ + + Y + +++ ++I DH+RA+V L+DGV
Sbjct: 246 AAILQDVEDFYRTDTFYPIIERVALFSGKPYEGT---ASVSHRVIADHIRAVVAALADGV 302
Query: 334 FPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKA 393
SN GRGYV+RRL+RRA+R G LLG L+ FL +A EL +++
Sbjct: 303 TFSNTGRGYVIRRLLRRALRHGYLLG--------LQEPFLHRLAPVVAELLGDFYPEMRE 354
Query: 394 REQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFG 453
+ ++++ EE RF++TLE G K LD +L+ G V L G +AF LYDT+G
Sbjct: 355 NLPAVEKQIRLEEERFLETLEGGLKRLDTLLSGL-----RPGEV--LPGAEAFRLYDTYG 407
Query: 454 FPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKI----PD 509
FP+++T E+A E G VD +GF ME Q+ +S+AA + SA + E++
Sbjct: 408 FPLDLTVEIAAERGFGVDTEGFKRAMEEQQERSRAAMAFEREIFKKSAQVLEELYAERGA 467
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
TEFLGY TL A+ V +LL + + + G++V+V+L+RTPFYAE GGQIGD+G L
Sbjct: 468 TEFLGYGTLEAEGTVLALLAGDQSLEEAGPGTEVQVVLDRTPFYAEGGGQIGDFGHLEWP 527
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
G + V+ K+ +F+H+ + EG L VG V A+VDP R+ + HHTATH
Sbjct: 528 SGRAR------VETTLKTERGIFLHRAKVEEGTLRVGERVRAVVDPA-RRDTERHHTATH 580
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
LL AAL+ V+G QAGSLVA DRLRFDF PL ELE IE L+N WI +
Sbjct: 581 LLHAALRAVLGPHVRQAGSLVAPDRLRFDFTHPEPLTQEELERIELLVNRWILADFPVTW 640
Query: 690 KVMALDDAKRAGAIAMFGEKY 710
+ + L++AKR GA+A+FGEKY
Sbjct: 641 RYLPLEEAKREGAMALFGEKY 661
>gi|455643835|gb|EMF22957.1| alanyl-tRNA ligase [Streptomyces gancidicus BKS 13-15]
Length = 890
Score = 551 bits (1420), Expect = e-154, Method: Compositional matrix adjust.
Identities = 300/678 (44%), Positives = 424/678 (62%), Gaps = 33/678 (4%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQRC 112
IR+R+L F+ RGH V+PSASL+ +DPT+LL AGM+ FKP FLG+V RA + Q+C
Sbjct: 6 IRRRWLSFFEERGHTVVPSASLIADDPTLLLVPAGMVPFKPYFLGEVKPPFDRATSVQKC 65
Query: 113 IRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE-----FGLPANRLW 167
+RT D+E VG+T+RH TFF+M GNFSFGDYFK+ A++ AWE T +GL +LW
Sbjct: 66 VRTPDIEEVGKTTRHGTFFQMCGNFSFGDYFKEGAVKLAWELLTSPQDKGGYGLEPEKLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCS 227
I+VY+DDDEA +IW++ VGVP E I+R+G DNFW+ G GPCGPCSEI YD P+ G
Sbjct: 126 ITVYQDDDEAEQIWHEVVGVPKERIQRLGKKDNFWSMGVPGPCGPCSEINYDRGPEFGPE 185
Query: 228 DVDLGDDTRFIEFYNLVFMQYNK-----KDDGS-LEPLKQKNIDTGLGLERIARILQKVP 281
+D R++E +NLVFMQY + KDD L L KNIDTGLGLER+A ILQ V
Sbjct: 186 GGPAVNDERYVEIWNLVFMQYERGEGTGKDDFEILGDLPSKNIDTGLGLERLAMILQGVQ 245
Query: 282 NNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRG 341
N YE D +I+KA+EL V Y ++ ++++L+++ DH+R L+ DGV P N GRG
Sbjct: 246 NMYEIDTSMAVIEKATELTGVRYGDAHG-SDVSLRVVTDHMRTATMLIGDGVTPGNEGRG 304
Query: 342 YVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEE 401
YV+RR++RRA+R RLLG G +L + + ++ EL T +RI +
Sbjct: 305 YVLRRIMRRAIRNMRLLGATGPVVKDLIDVVIGMMGQQYPELITD--------RERIEKV 356
Query: 402 LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKE 461
EE F++TL+ G +LD A+S T+ +GS L G AFLL+DT+GFP+++T E
Sbjct: 357 ALAEENAFLKTLKAGTNILDT----AVSETKAAGSAV-LPGDKAFLLHDTWGFPIDLTLE 411
Query: 462 VAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSA---DLAEKIPDTEFLGYDTL 518
+A E G+SVD GF M+ QR +++A A K D ++A++ T+F+GY
Sbjct: 412 MAAEQGLSVDEDGFRRLMKEQRERAKADAQAKKTGHADLGAYREIADRAGATDFIGYTDT 471
Query: 519 SAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAV 578
++ V +LV+G ++G +VE++L+RTPFYAE GGQIGD G + G AV
Sbjct: 472 EGESSVVGILVDGVSSPAATEGDEVEIVLDRTPFYAEGGGQIGDTGRIRTDSG-----AV 526
Query: 579 VEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKV 638
+EV+D +K + V+VHKG ++ G + VG A +D + R+ H+ATHL AL+
Sbjct: 527 IEVRDCQKPVPGVYVHKGVVQVGEVTVGARAHAAIDDRRRKAIARAHSATHLTHQALRDA 586
Query: 639 IGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAK 698
+G +QAGS R RFDF + T + ++E+ IN + ++ VM +D+AK
Sbjct: 587 LGPTAAQAGSENQPGRFRFDFGSPSAVPQTVMLDVEQKINEVLARDLDVRADVMGIDEAK 646
Query: 699 RAGAIAMFGEKYGEQVKI 716
R GAIA FGEKYGE+V++
Sbjct: 647 RQGAIAEFGEKYGERVRV 664
>gi|424776114|ref|ZP_18203099.1| alanyl-tRNA ligase [Alcaligenes sp. HPC1271]
gi|422888574|gb|EKU30960.1| alanyl-tRNA ligase [Alcaligenes sp. HPC1271]
Length = 875
Score = 551 bits (1420), Expect = e-154, Method: Compositional matrix adjust.
Identities = 298/678 (43%), Positives = 425/678 (62%), Gaps = 44/678 (6%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR++FL F+ S+GH ++ SASLVP DPT+L T AGM+QFK +F GK R RA +SQR
Sbjct: 6 IRQKFLSFFESKGHHIVSSASLVPGNDPTLLFTNAGMVQFKDVFTGKETRPYNRATSSQR 65
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI++AWE T + LPA +LW
Sbjct: 66 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAIRYAWELLTTVYKLPAEKLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYYDF 220
++VY++DDEA++IW E+GVP E I R+G DNFW TGPCGPCSEI+YD
Sbjct: 126 VTVYQEDDEAYDIWASEIGVPKERIIRIGDKGGVRYNSDNFWQMADTGPCGPCSEIFYDH 185
Query: 221 HPD--RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQ 278
D G D R+IE +NLVFMQ+ + DG++ PL + +DTG+GLERI+ +LQ
Sbjct: 186 GADVWGGPPGSPEEDGDRYIEVWNLVFMQFERSADGTMTPLPKPCVDTGMGLERISAVLQ 245
Query: 279 KVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNI 338
V +NYE DL +I+ A+ +++D +N +LK+I DH+RA +L+ DGV PSN
Sbjct: 246 HVHSNYEIDLFQSLIQAAAR-----ETKTSDLSNNSLKVIADHIRACSFLIIDGVIPSNE 300
Query: 339 GRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRI 398
GRGYV+RR+IRRA+R G LG KG F + + + + + RE RI
Sbjct: 301 GRGYVLRRIIRRALRHGHKLGQKGL-------FFYRLVQDLGLTMGEAYPELISQRE-RI 352
Query: 399 LEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEI 458
+ L++EE RF +TLE G ++L+ LA+ +L GQ F LYDT+GFPV++
Sbjct: 353 EQVLRQEEERFSETLENGMRILEGALANLPENA-------KLDGQTLFTLYDTYGFPVDL 405
Query: 459 TKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTL 518
T ++ E G+ VD+ GF++ MENQR+ ++A+ + L+ T F GY TL
Sbjct: 406 TADICRERGIEVDLDGFEVAMENQRQMARASGK-----FKTAEGLSYSGVQTRFDGYTTL 460
Query: 519 SAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAV 578
V +L V+G V V++G V+L+ TPFYAESGGQ+GD G L +G +
Sbjct: 461 EGSGTVTALYVDGTSVQSVAQGQQAVVVLDATPFYAESGGQVGDAGILSDAKGLS----- 515
Query: 579 VEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKV 638
EV+D +K VF H+G + G L VG+ V+A VD + R+R +H+ATHL+ AL++V
Sbjct: 516 FEVQDTQKISNQVFGHQGVLNAGTLTVGQTVQAQVDTERRERVIRNHSATHLMHKALRQV 575
Query: 639 IGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAK 698
+G Q GSLV ++ RFDF + ++ ++E ++N + +Q ++M+ DDA
Sbjct: 576 LGGHVQQRGSLVDAEKTRFDFAHDAAMTAEQIAQVEAIVNEQVLTNQAVQAQLMSFDDAV 635
Query: 699 RAGAIAMFGEKYGEQVKI 716
GA+A+FGEKYG++V++
Sbjct: 636 SGGAMALFGEKYGDEVRV 653
>gi|337750604|ref|YP_004644766.1| alanyl-tRNA synthetase [Paenibacillus mucilaginosus KNP414]
gi|336301793|gb|AEI44896.1| AlaS [Paenibacillus mucilaginosus KNP414]
Length = 873
Score = 551 bits (1419), Expect = e-154, Method: Compositional matrix adjust.
Identities = 305/678 (44%), Positives = 424/678 (62%), Gaps = 44/678 (6%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR ++L F+ S+GHK+ PSA LVP DP++L AGM KP F G+V + PR A SQ+
Sbjct: 6 IRSKWLQFFESKGHKIEPSAPLVPHNDPSLLWINAGMAPLKPYFDGRVVPENPRIANSQK 65
Query: 112 CIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANRLWIS 169
CIRTND+ENVG+T RHHTFFEMLGNFS GDYFK+E I WAWEF T G RL ++
Sbjct: 66 CIRTNDIENVGKTRRHHTFFEMLGNFSIGDYFKEEVITWAWEFLTSPEWIGFDPERLSVT 125
Query: 170 VYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRG-CSD 228
VY +D EAF+ WNK++G+P E I ++ +NFW+ G GPCGPC+EI+YD G SD
Sbjct: 126 VYPEDTEAFDYWNKKIGLPAERIYKL--QENFWDIG-EGPCGPCTEIFYDRGDKYGDLSD 182
Query: 229 VDL---GDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYE 285
+ G++ RF+E +NLVF Q+N DGS PL KNIDTG GLER A ILQ V +N++
Sbjct: 183 PECWPGGENERFLEVWNLVFSQFNHNKDGSYTPLPNKNIDTGAGLERFASILQDVDSNFD 242
Query: 286 TDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVR 345
TDL P+I+K ELA V Y + N+ ++ LK+I DH+R + + + DGV PSN GRGYV+R
Sbjct: 243 TDLFQPMIQKTCELAGVKY-KENEEFDVALKVIADHIRTVAFSVGDGVLPSNEGRGYVIR 301
Query: 346 RLIRRAVRTGRLLGIKGDGR-------GNLEGAFLPSIAEKAIELSTHIDSDVKAREQRI 398
RL+RRAVR G++LG+ G++ G + P + EK + I
Sbjct: 302 RLLRRAVRYGKVLGMDKPFLYLLTPIVGDVMGVYYPEVVEK---------------REFI 346
Query: 399 LEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEI 458
+ ++ EE RF +TL G +L +M A R++GS ++SG DAF LYDT+GFP ++
Sbjct: 347 EKVIRTEEERFHETLSDGLAILGEMAEKA----RQAGST-QISGPDAFKLYDTYGFPFDL 401
Query: 459 TKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTL 518
T++ A E G++VD +GFD M+ QR +++AA LA+ +EF+GY L
Sbjct: 402 TEDFAAEKGMTVDREGFDAAMQEQRDRARAARQDSGSMQTQGGPLADFTVKSEFVGYTDL 461
Query: 519 SAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAV 578
A V +++ + V V G +V+L+ TPFYAESGGQ+ D+G Y+T G V
Sbjct: 462 VTPAKVIAVVHENQFVDLVGTGEMCQVILDVTPFYAESGGQVSDHG--YITAGDT----V 515
Query: 579 VEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKV 638
++V+DV K+ VH + GVL G V+A V ++R+ +HTATHLL ALK+V
Sbjct: 516 LKVEDVTKAPHGQHVHTVVVEAGVLRKGDSVQATVTQEVREDIIKNHTATHLLHKALKEV 575
Query: 639 IGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAK 698
+G+ +QAGSLVA +RLRFDF+ + EL+EIER +N I + + + +AK
Sbjct: 576 LGEHVNQAGSLVAPERLRFDFSHFGSISAEELQEIERRVNAQIWKTTEVDISLKPIAEAK 635
Query: 699 RAGAIAMFGEKYGEQVKI 716
GA+A+FGEKYG+ V++
Sbjct: 636 AMGAMALFGEKYGDVVRV 653
>gi|260599084|ref|YP_003211655.1| alanyl-tRNA synthetase [Cronobacter turicensis z3032]
gi|260218261|emb|CBA33198.1| Alanyl-tRNA synthetase [Cronobacter turicensis z3032]
Length = 875
Score = 551 bits (1419), Expect = e-154, Method: Compositional matrix adjust.
Identities = 317/689 (46%), Positives = 435/689 (63%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTAQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T F LP +R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQYAWELLTGAQWFNLPKDR 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NYE DL +IK +ANV+ A D +N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYEIDLFQKLIKA---VANVTGA--TDLSNKSLRVIADHIRSCAFLIADGVIP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRA+R G +LG K F + +++ ++K ++
Sbjct: 302 SNENRGYVLRRIIRRAIRHGNMLGAKD--------TFFYKLVGPLVDVMGSAGDELKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLTGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQ------AAHNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRARESSGFGADYNAM-IRVDGA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD A V +L ++GK V +V+ G V+L+ TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDQTELTARVTALFIDGKSVEQVAAGQQAVVVLDETPFYAESGGQVGDKGELKGN 515
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
T V D +K G H G + GVL+VG V+A VD R+R +++H+ATH
Sbjct: 516 GFT------FTVNDTQK-YGQAIGHIGELTSGVLKVGEGVKAEVDQARRERIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G +Q GSLV LRFDF+ + E+ ++E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVAQKGSLVNDKGLRFDFSHFEAMKPEEIRKVEDLVNAQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
VM L+ AK GA+A+FGEKY ++V++ S
Sbjct: 629 NVMDLEAAKAKGAMALFGEKYEDRVRVLS 657
>gi|317122060|ref|YP_004102063.1| alanyl-tRNA synthetase [Thermaerobacter marianensis DSM 12885]
gi|315592040|gb|ADU51336.1| alanyl-tRNA synthetase [Thermaerobacter marianensis DSM 12885]
Length = 905
Score = 551 bits (1419), Expect = e-154, Method: Compositional matrix adjust.
Identities = 297/665 (44%), Positives = 419/665 (63%), Gaps = 36/665 (5%)
Query: 65 GHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQRCIRT----NDVE 119
GH ++PS+SL+P +DPT+L T AGM+QFK +F GK RA T+Q+C+R ND+E
Sbjct: 33 GHTIVPSSSLIPKDDPTLLFTNAGMVQFKDVFTGKEKVPYKRATTAQKCMRAGGKHNDLE 92
Query: 120 NVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWISVYEDDDEAFE 179
NVG+T+RHHTFFEMLGNFSFGDYFK++AI +AW F T E GLP RLW ++Y +DDEAF+
Sbjct: 93 NVGKTARHHTFFEMLGNFSFGDYFKRDAIHFAWTFLTEELGLPKERLWATIYREDDEAFQ 152
Query: 180 IWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYD----FHPDRGCSDVDLGDDT 235
+W + G+P I R+G DNFW G TGPCGPCSEI YD F + + D
Sbjct: 153 LWQEVTGIPASRIVRLGEKDNFWAMGDTGPCGPCSEIVYDRGEEFRCEAETCAIGACDCD 212
Query: 236 RFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDLIFPIIKK 295
R++E +NLVFMQ+N+ + G +EPL + +IDTG+GLERIA ++Q V +N++TDL P+I+
Sbjct: 213 RWLEIWNLVFMQFNRDETGRMEPLPRPSIDTGMGLERIASVMQGVASNFDTDLFRPLIRA 272
Query: 296 ASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLIRRAVRTG 355
EL Y + ++I DH RA +L+++GV PSN GRG+V+RR++RRAVR G
Sbjct: 273 VEELTGRRYEEGE--PGFPFRVIADHARACTFLIAEGVLPSNEGRGHVLRRILRRAVRFG 330
Query: 356 RLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELRFVQTLER 415
R+LGI + FL + + E+ +V+ R + ++ EE RF +TL++
Sbjct: 331 RILGI--------QEPFLYRLVDTVGEVMGGAYPEVRQRADYVARVIRGEEERFFRTLDQ 382
Query: 416 GEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGVSVDMKGF 475
G +L +++ A R R G + G++AF+LYDT+GFP+++T + AEE G+ VD +GF
Sbjct: 383 GMAILAEVIERA--RARGDGVI---RGEEAFVLYDTYGFPLDLTVDAAEEAGLRVDREGF 437
Query: 476 DIEMENQRRQSQAAHNAVKLSVDDSADLAEKI---PDTEFLGYDTLSAKAIVESLLVNGK 532
+ M QR++++AA V D + LA + P T F GY+ L + V L+ +
Sbjct: 438 EQAMAVQRQRARAARE-VAEGWDPGSPLALALADEPATVFTGYERLEDEGTVRLLVRGDQ 496
Query: 533 PVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVKKSLGSVF 592
PV + G +V V+L+RTPFYAE GGQ+GD G+L A +EV D + G F
Sbjct: 497 PVERARAGEEVGVVLDRTPFYAERGGQVGDTGWL------EAPGARLEVLDTQPLPGGRF 550
Query: 593 VHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQAGSLVAF 652
+HK + EG + VG V+ VD R +HTATHLL AALK+V+G +QAGSLVA
Sbjct: 551 LHKARVVEGTVTVGDRVQGRVDAARRAAIMRNHTATHLLHAALKRVLGDHVNQAGSLVAP 610
Query: 653 DRLRFDF-NFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAMFGEKYG 711
DRLRFDF +F P D +L IE ING I ++ +L++A AGA+A+FGEKYG
Sbjct: 611 DRLRFDFTHFEAPTPD-QLRAIEDEINGVILAGVPVRWYWTSLEEALEAGAMALFGEKYG 669
Query: 712 EQVKI 716
+V++
Sbjct: 670 REVRV 674
>gi|291440781|ref|ZP_06580171.1| alanyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
gi|291343676|gb|EFE70632.1| alanyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
Length = 889
Score = 551 bits (1419), Expect = e-154, Method: Compositional matrix adjust.
Identities = 303/679 (44%), Positives = 425/679 (62%), Gaps = 36/679 (5%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQRC 112
IR+R+L F+ RGH V+PSASL+ +DPT+LL AGM+ FKP FLG+V RA + Q+C
Sbjct: 6 IRRRWLSFFEERGHTVVPSASLIADDPTLLLVPAGMVPFKPYFLGEVKPPFDRATSVQKC 65
Query: 113 IRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE-----FGLPANRLW 167
+RT D+E VG+T+RH TFF+M GNFSFGDYFK+ AI+ AWE T +GL RLW
Sbjct: 66 VRTPDIEEVGKTTRHGTFFQMCGNFSFGDYFKEGAIKLAWELLTSAQDKGGYGLDPERLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCS 227
I+VY+DDDEA +IW++ VGVP E I+R+G DNFW+ G GPCGPCSEI YD P+ G
Sbjct: 126 ITVYQDDDEAEQIWHEVVGVPKERIQRLGKKDNFWDMGVPGPCGPCSEINYDRGPEFGVE 185
Query: 228 DVDLGDDTRFIEFYNLVFMQYNK-----KDDGSLEPLKQKNIDTGLGLERIARILQKVPN 282
+D R++E +NLVFMQY + KD L L KNIDTGLGLER+A ILQ V N
Sbjct: 186 GGPAVNDERYVEIWNLVFMQYERGEGPGKDYPILGDLPSKNIDTGLGLERLAMILQGVQN 245
Query: 283 NYETDLIFPIIKKASELANVSY--AQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGR 340
YE D +I KA+EL V Y AQ++D ++L+++ DH+R V L+ DGV P N GR
Sbjct: 246 MYEIDTSMAVIDKATELTGVRYGDAQASD---VSLRVVTDHMRTSVMLIGDGVTPGNEGR 302
Query: 341 GYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILE 400
GYV+RR++RRA+R RLLG G +L + + ++ EL T +RI +
Sbjct: 303 GYVLRRIMRRAIRNMRLLGATGPVVKDLIDVVIGMMGQQYPELITD--------RERIEK 354
Query: 401 ELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITK 460
EE F++TL+ G +LD A+S T+ +GS L G AFLL+DT+GFP+++T
Sbjct: 355 VALAEENAFLKTLKAGTNILDT----AVSDTKAAGSTV-LPGDKAFLLHDTWGFPIDLTL 409
Query: 461 EVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSA---DLAEKIPDTEFLGYDT 517
E+A E G+SVD +GF M+ QR +++A A K D ++A++ T+F+GY
Sbjct: 410 EMAAEQGLSVDEEGFRRLMKEQRERAKADARAKKTGHADLGAYREIADRAGATDFIGYTH 469
Query: 518 LSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTA 577
++ V +LV+G P ++G +VE++L+RTPFYAE GGQIGD G + G A
Sbjct: 470 TEGESTVVGILVDGVPSAAATEGDEVEIVLDRTPFYAEGGGQIGDTGRIRTDSG-----A 524
Query: 578 VVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKK 637
V+EV+D +K + V+VHKG ++ G + V + A +D + R H+ATHL AL+
Sbjct: 525 VIEVRDCQKPVPGVYVHKGVVQVGEVTVDAKAHASIDARRRTAIARAHSATHLTHQALRD 584
Query: 638 VIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDA 697
+G +QAGS R RFDF + T + ++E+ IN + ++ VM +D+A
Sbjct: 585 ALGPTAAQAGSENQPGRFRFDFGSPSAVPQTVMLDVEQKINEVLARDLDVRADVMGIDEA 644
Query: 698 KRAGAIAMFGEKYGEQVKI 716
++ GAIA FGEKYGE+V++
Sbjct: 645 RKQGAIAEFGEKYGERVRV 663
>gi|260549963|ref|ZP_05824178.1| alanyl-tRNA synthetase [Acinetobacter sp. RUH2624]
gi|425741331|ref|ZP_18859481.1| alanine--tRNA ligase [Acinetobacter baumannii WC-487]
gi|260406955|gb|EEX00433.1| alanyl-tRNA synthetase [Acinetobacter sp. RUH2624]
gi|425492637|gb|EKU58891.1| alanine--tRNA ligase [Acinetobacter baumannii WC-487]
Length = 883
Score = 551 bits (1419), Expect = e-154, Method: Compositional matrix adjust.
Identities = 301/683 (44%), Positives = 429/683 (62%), Gaps = 50/683 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FL ++ ++GH + S+SLVP DPT+L T AGM QFK FLG R RA TSQ+
Sbjct: 11 IREAFLRYFETQGHTRVASSSLVPANDPTLLFTNAGMNQFKDCFLGLEKRDYVRATTSQK 70
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND++NVG T+RHHTFFEMLGNFSFGDYFK++A+++AWEF T E LP +R
Sbjct: 71 CVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKRDALKFAWEFLTSEQWLALPKDR 130
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
L+++VY DDEA++IWNKE+G+ E I R+G A DNFW G TGPCGPCSEI++
Sbjct: 131 LYVTVYHTDDEAYDIWNKEIGLAPERIIRIGDNKGEKYASDNFWAMGDTGPCGPCSEIFF 190
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D RFIE +N VFMQ+N+ DG L PL ++DTG+GLERI+
Sbjct: 191 D-HGDHIWGGLPGSPEEDGDRFIEIWNNVFMQFNRTADGVLHPLPAPSVDTGMGLERISA 249
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL ++K A+ + + D +L+++ DH R+ +L++DGV P
Sbjct: 250 VLQHVNSNYDIDLFQHLLKAAANIIGIE-----DEGQPSLRVVADHARSCCFLIADGVNP 304
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN GRGYV+RR+IRRAVR G LG G F + + IE+ +++AR
Sbjct: 305 SNEGRGYVLRRIIRRAVRHGNKLGATG--------TFFYKMLQPLIEVMGQAYPELEARR 356
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
I L REE +F +TLE+G KLL+ LA +T + G F LYDT+GFP
Sbjct: 357 DVIEATLIREEEQFAKTLEQGLKLLEGELAQLKDKT--------IPGATVFKLYDTYGFP 408
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGY 515
++T ++A E G +D GF++EM QR Q A +A K +VD ++ + + +T+F GY
Sbjct: 409 TDLTADIARERGFIIDEAGFEVEMAAQR---QRARDAGKFAVDYNS-IVKVEGETQFDGY 464
Query: 516 DTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
+ + + ++ +G V +VS+G + ++LN+TPFYAESGGQIGD G +
Sbjct: 465 INTTGQGQIVAIYKDGVQVDEVSEGDEALIVLNQTPFYAESGGQIGDTGIF------KNE 518
Query: 576 TAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAAL 635
T + EV+D KKS G FVH+G + G L+ + VEAIV +R+ +H+ATHLL AAL
Sbjct: 519 TGIFEVQDTKKS-GGAFVHQGIVTVGNLKANQNVEAIVKADIREATARNHSATHLLHAAL 577
Query: 636 KKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALD 695
++++G Q GSLVA D LRFDF +P+ +L+++ERL+N I + T+++ ++
Sbjct: 578 RQILGSHVQQKGSLVASDILRFDFANDQPVSFEQLQQVERLVNAEIIANTPVTTELLDIE 637
Query: 696 DAKRAGAIAMFGEKYGEQVKISS 718
AK GA+ +FGEKYG++V++ S
Sbjct: 638 AAKAKGAMMLFGEKYGDEVRVLS 660
>gi|408415616|ref|YP_006626323.1| alanyl-tRNA synthetase [Bordetella pertussis 18323]
gi|401777786|emb|CCJ63123.1| alanyl-tRNA synthetase [Bordetella pertussis 18323]
Length = 874
Score = 551 bits (1419), Expect = e-154, Method: Compositional matrix adjust.
Identities = 305/679 (44%), Positives = 413/679 (60%), Gaps = 46/679 (6%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR++FL F+ S+GH ++PS+SLVP DPT+L T +GM+QFK +F GK R RA +SQR
Sbjct: 6 IRQKFLQFFQSKGHTIVPSSSLVPANDPTLLFTNSGMVQFKDVFTGKEARAYKRATSSQR 65
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK+EAIQ+AWE T + LPA +LW
Sbjct: 66 SVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKREAIQYAWELLTQVYKLPAEKLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYYDF 220
++VY++DDEA++IW KEVGVP E I R+G A DNFW TGPCGPCSEI+YD
Sbjct: 126 VTVYQEDDEAYDIWAKEVGVPAERIIRIGDNKGARYASDNFWQMADTGPCGPCSEIFYDH 185
Query: 221 HPD--RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQ 278
P+ G D R+IE +NLVFMQ+ + G++E L + +DTG+GLERIA +LQ
Sbjct: 186 GPEIWGGPPGSPEEDGDRYIEIWNLVFMQFERDAAGNMERLPKPCVDTGMGLERIAAVLQ 245
Query: 279 KVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNI 338
V +NYE DL +I A+ V D + +LK+I DH+RA +L+ DG+ PSN
Sbjct: 246 HVHSNYEIDLFQKLIAAAARETGV-----KDLADNSLKVIADHIRACAFLIVDGIIPSNE 300
Query: 339 GRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRI 398
GRGYV+RR++RRA+R G LG L + + E EL+ +R+
Sbjct: 301 GRGYVLRRIVRRALRHGYKLGQTKSFFHRLVPDLVAEMGEAYPELAQ--------VAERV 352
Query: 399 LEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEI 458
+ L++EE RF +TLE G K+LD LA + + P L G F LYDT+GFPV++
Sbjct: 353 AQVLRQEEERFGETLEHGMKILDGALA------KVAKGDP-LDGTTLFTLYDTYGFPVDL 405
Query: 459 TKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTL 518
T ++ E V VDM GF+ M+ QR Q++AA K++ S + AE T F GY+ L
Sbjct: 406 TADICREREVEVDMAGFEAAMQRQREQARAA-GKFKMAEGLSYEGAE----TRFEGYENL 460
Query: 519 SAKAI-VESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTA 577
+ V +L V G V +VS G D V+L+ TPFYAESGGQ+GD G L
Sbjct: 461 ELSGVKVTALYVEGTQVEQVSAGQDAVVVLDATPFYAESGGQVGDTGLL------EAGGV 514
Query: 578 VVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKK 637
V D K VF H GT+ G L+VG + A VD R R +H+ATHL+ AL++
Sbjct: 515 RFAVADTLKIQPGVFGHHGTLEAGALKVGDTLLARVDAVRRARTVRNHSATHLMHKALRE 574
Query: 638 VIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDA 697
V+G Q GSLV D+ RFDF P+ ++ +E ++N + + K+MA DDA
Sbjct: 575 VLGAHVQQRGSLVDPDKTRFDFAHDAPMTAEQIARVEAIVNAEVLANQATEAKIMAYDDA 634
Query: 698 KRAGAIAMFGEKYGEQVKI 716
+ GA+A+FGEKYG+ V++
Sbjct: 635 VKGGAMALFGEKYGDTVRV 653
>gi|456354265|dbj|BAM88710.1| alanyl-tRNA synthetase [Agromonas oligotrophica S58]
Length = 921
Score = 551 bits (1419), Expect = e-154, Method: Compositional matrix adjust.
Identities = 305/700 (43%), Positives = 428/700 (61%), Gaps = 40/700 (5%)
Query: 34 PLTEEVEDKSQDF-----PSSGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAG 87
PL++ V + DF S + IR FL+F+A+ GH+++PS+ LVP DPT++ T AG
Sbjct: 13 PLSKSVSAEFPDFFDWIAMSGVNEIRSTFLNFFAANGHEIVPSSPLVPRNDPTLMFTNAG 72
Query: 88 MLQFKPIFLGKVPRQVPRAATSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYF 143
M+QFK +F G R RA TSQ+C+R ND++NVG T+RHHTFFEMLGNFSFGDYF
Sbjct: 73 MVQFKNVFTGVEKRPYSRATTSQKCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYF 132
Query: 144 KKEAIQWAWEFSTVEFGLPANRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWN 203
K+ AI+ AW+ T EFGLP ++L +VY DDDEAF +W K G+P I R+ DNFW
Sbjct: 133 KENAIELAWKLVTKEFGLPKDKLTATVYVDDDEAFGLWKKIAGLPESRIIRIAGSDNFWQ 192
Query: 204 SGATGPCGPCSEIYYDFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLK 260
G TGPCGPCSEI+YD H D+ G D RFIE +NLVFMQY + + G L
Sbjct: 193 MGDTGPCGPCSEIFYD-HGDKIWGGPPGSPEQDGDRFIEIWNLVFMQYEQHEGGGRVSLP 251
Query: 261 QKNIDTGLGLERIARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGD 320
+ +IDTG GLER+A +LQ +NY+ DL +I+ ++L N A +L++I D
Sbjct: 252 KPSIDTGAGLERVAAVLQGKHDNYDIDLFVALIRTIADLTN---ADPGGPQKASLRVIAD 308
Query: 321 HLRAIVYLLSDGVFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKA 380
HLRA +L+SDGV PSN GRGYV+RR++RRA+R +LLG + L G + +
Sbjct: 309 HLRASSFLISDGVLPSNEGRGYVLRRIMRRAMRHAQLLGAREPLMHKLVGTLSREMGQAY 368
Query: 381 IELSTHIDSDVKAREQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRL 440
EL ++A E I E L+ EE RF +TLERG +LD+ S + G +
Sbjct: 369 PEL-------IRA-EALIKETLRLEETRFRKTLERGLTILDEK-----SAGLQKGDM--F 413
Query: 441 SGQDAFLLYDTFGFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDS 500
G AF LYDT+GFP+++T++ + G+SVD F M+ QR +++AA + ++
Sbjct: 414 DGDVAFTLYDTYGFPLDLTQDALKSRGISVDQASFTDAMDRQRAKARAAWAGSGEAATET 473
Query: 501 A--DLAEKIPDTEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGG 558
L EK+ TEFLGYDT A+ V +L+ +G V + G ++LN+TPFY ESGG
Sbjct: 474 IWFPLREKLGATEFLGYDTEIAEGAVTALIKDGAEVDSLKAGESGAIVLNQTPFYGESGG 533
Query: 559 QIGDYGFLYVTQGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLR 618
Q+GD G L + V D +K G +FVH GT+ +G L++G ++ VD R
Sbjct: 534 QVGDTGVL------SGDGIKFRVTDTQKKAGDLFVHIGTVEQGTLKLGSALQLDVDHGRR 587
Query: 619 QRAKVHHTATHLLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLIN 678
+ +H+ATH+L AL++V+G +Q GSLV+ DRLRFDF +P+ EL +E + N
Sbjct: 588 SAIRANHSATHILHEALRQVLGDHIAQRGSLVSPDRLRFDFVHPKPISPEELARVEDIAN 647
Query: 679 GWIGDANLLQTKVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+ + + T++M LDDA+ AGA A+FGEKYG++V++ S
Sbjct: 648 DVVLENAEVTTRLMGLDDAREAGARALFGEKYGDEVRVVS 687
>gi|269140202|ref|YP_003296903.1| alanyl-tRNA synthetase [Edwardsiella tarda EIB202]
gi|387868720|ref|YP_005700189.1| alanyl-tRNA synthetase [Edwardsiella tarda FL6-60]
gi|267985863|gb|ACY85692.1| alanyl-tRNA synthetase [Edwardsiella tarda EIB202]
gi|304560033|gb|ADM42697.1| Alanyl-tRNA synthetase [Edwardsiella tarda FL6-60]
Length = 875
Score = 550 bits (1418), Expect = e-154, Method: Compositional matrix adjust.
Identities = 308/688 (44%), Positives = 426/688 (61%), Gaps = 60/688 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDFY S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 8 IRQAFLDFYHSKGHQVVDSSSLVPNNDPTLLFTNAGMNQFKDVFLGIDKRSYSRATTAQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AI +AWE T F LP +
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAINFAWELLTGAQWFNLPKEK 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA++IW EVGVP E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYESDDEAYDIWANEVGVPRERIIRIGDNKGAAYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DF--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARI 276
D H G D R+IE +N+VFMQ+N++ DG+L PL + ++DTG+GLERIA +
Sbjct: 188 DHGAHIAGGPPGSPDEDGDRYIEIWNIVFMQFNRQSDGTLLPLPKPSVDTGMGLERIAAV 247
Query: 277 LQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPS 336
LQ V +NY+ DL +I + + + VS D ++ +L++I DH+R+ +L+SDGV PS
Sbjct: 248 LQHVNSNYDIDLFRTLIAETARVIGVS-----DLSSKSLRVIADHIRSCAFLVSDGVLPS 302
Query: 337 NIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQ 396
N GRGYV+RR+IRRAVR G +LG K AF + + I + + ++
Sbjct: 303 NEGRGYVLRRIIRRAVRHGHMLGAKE--------AFFYKLVKPLIAVMGSAADALAQQQA 354
Query: 397 RILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPV 456
+ + LK EE +F +TLERG LLD L+ T L G+ AF LYDT+GFP+
Sbjct: 355 MVEQVLKTEEEQFARTLERGLTLLDDELSTLDGDT--------LDGETAFRLYDTYGFPL 406
Query: 457 EITKEVAEEHGVSVDMKGFDIEMENQRRQSQ------AAHNAVKLSVDDSADLAEKIPDT 510
++T +V E G+ VD +GF+ ME QRR+++ A +N++ + VD S T
Sbjct: 407 DLTADVCRERGLKVDEEGFERAMEAQRRRARESSGFGADYNSM-IRVDGS---------T 456
Query: 511 EFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQ 570
+F GY A+V +L NG+ V + G + V+L +TPFYAESGGQ+GD G L
Sbjct: 457 DFTGYHLQQQDALVTALFHNGQAVDALQAGEEGVVVLAQTPFYAESGGQVGDRGEL---- 512
Query: 571 GTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHL 630
T Q V V+D +K G H G + +G L VG V+A +D R+R + H+ATHL
Sbjct: 513 -TAQGCRFV-VEDTQK-YGQAIGHLGKVAQGSLRVGERVQASIDGARRERIRQSHSATHL 569
Query: 631 LQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTK 690
+ AAL+ V+G+ +Q GSLV+ LRFDF+ + ++ ++E ++N I + T+
Sbjct: 570 MHAALRSVLGEHVAQKGSLVSDGALRFDFSHAEAMKPQQIRQVEDIVNAQIRRNLPIDTQ 629
Query: 691 VMALDDAKRAGAIAMFGEKYGEQVKISS 718
M L++AK GA+A+FGEKY QV++ S
Sbjct: 630 EMGLEEAKAKGAMALFGEKYDAQVRVLS 657
>gi|170695494|ref|ZP_02886639.1| alanyl-tRNA synthetase [Burkholderia graminis C4D1M]
gi|170139685|gb|EDT07868.1| alanyl-tRNA synthetase [Burkholderia graminis C4D1M]
Length = 890
Score = 550 bits (1418), Expect = e-154, Method: Compositional matrix adjust.
Identities = 306/695 (44%), Positives = 424/695 (61%), Gaps = 53/695 (7%)
Query: 43 SQDFPS---SGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGK 98
SQD P IR++FL F+ S+GH ++ S+SLVP DPT+L T +GM+QFK +FLG
Sbjct: 9 SQDRPPHAMKAAEIREKFLKFFESKGHTIVRSSSLVPGNDPTLLFTNSGMVQFKDVFLGA 68
Query: 99 VPRQVPRAATSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEF 154
R RA T+QR +R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI +AWE
Sbjct: 69 ESRPYSRATTAQRSVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAIHYAWEL 128
Query: 155 STVEFGLPANRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGAT 207
T + LP ++LW++VY +DDEA +IW KEVGVPVE I R+G A DNFW T
Sbjct: 129 LTGVYQLPKDKLWVTVYHEDDEAHDIWAKEVGVPVERIIRIGDNKGARYASDNFWQMADT 188
Query: 208 GPCGPCSEIYYDFHPD-----RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQK 262
GPCGPCSEI+YD PD G D D GD R+IE +NLVFMQ+N+ G++ PL ++
Sbjct: 189 GPCGPCSEIFYDHGPDVWGGPPGSPDED-GD--RYIEIWNLVFMQFNRDAQGNMTPLPKQ 245
Query: 263 NIDTGLGLERIARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHL 322
+DTG+GLERIA +LQ V +NYE DL +I A+ VS D TN +LK+I DH+
Sbjct: 246 CVDTGMGLERIAAVLQHVHSNYEIDLFQALINAAARETGVS-----DLTNNSLKVIADHI 300
Query: 323 RAIVYLLSDGVFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIE 382
RA +L+ DGV P N GRGYV+RR++RRA+R G LG K G+F + +
Sbjct: 301 RACSFLIVDGVIPGNEGRGYVLRRIVRRAIRHGYKLGKK--------GSFFHRMVADLVA 352
Query: 383 LSTHIDSDVKAREQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSG 442
++K EQR+ + L++EE RF +T+E G +LD LA+ + ++ L G
Sbjct: 353 QMGGAYPELKDAEQRVTDVLRQEEERFFETIEHGMSILDNALAELDKKGGKT-----LDG 407
Query: 443 QDAFLLYDTFGFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD 502
+ AF L+DT+GFP+++T +V E V+VD FD M QR Q++AA K+ +
Sbjct: 408 ELAFKLHDTYGFPLDLTADVCREREVTVDEAAFDEAMARQREQARAA-GKFKM----AQG 462
Query: 503 LAEKIPDTEFLGYDTLS-AKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIG 561
L T F GY+ + A V +L V+G V +V+ G V+L+ TPFYAESGGQ+G
Sbjct: 463 LEYSGAKTTFHGYEEIVFDDAKVVALYVDGASVQQVTHGQQAVVVLDHTPFYAESGGQVG 522
Query: 562 DYGFLYVTQGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRA 621
D G L + V D K V H GT+ +G L+VG V+A +D R R
Sbjct: 523 DQGLL------ANASVRFAVADTLKVQADVVGHHGTLEQGTLKVGDVVKAEIDAVRRART 576
Query: 622 KVHHTATHLLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWI 681
+H+ATHL+ AL++V+G Q GSLV D+ RFDF + P+ D ++ +E+++N +
Sbjct: 577 ARNHSATHLMHKALREVLGSHVQQKGSLVDPDKTRFDFAHNAPMTDEQIRRVEQIVNAEV 636
Query: 682 GDANLLQTKVMALDDAKRAGAIAMFGEKYGEQVKI 716
+VM D+A + GA+A+FGEKYG++V++
Sbjct: 637 LANAPGIVRVMPFDEAVKGGAMALFGEKYGDEVRV 671
>gi|354596473|ref|ZP_09014490.1| alanyl-tRNA synthetase [Brenneria sp. EniD312]
gi|353674408|gb|EHD20441.1| alanyl-tRNA synthetase [Brenneria sp. EniD312]
Length = 875
Score = 550 bits (1418), Expect = e-154, Method: Compositional matrix adjust.
Identities = 308/680 (45%), Positives = 426/680 (62%), Gaps = 48/680 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+++PS+SLVP+ DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRRAFLDFFHSKGHQIVPSSSLVPDNDPTLLFTNAGMNQFKDVFLGLDKRGYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI +AWE T F LP +
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQQAIHYAWELLTGPQWFNLPKEK 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VY DDEA++IW E+GVP E I R+G A DNFW G TGPCGPCSEI+Y
Sbjct: 128 LWVTVYATDDEAYDIWANEIGVPHERIIRIGDNKGAPYASDNFWQMGDTGPCGPCSEIFY 187
Query: 219 DF--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARI 276
D H G D R+IE +NLVFMQ+N++ DG++ PL + ++DTG+GLERI+ +
Sbjct: 188 DHGDHIAGGPPGSPEEDGDRYIEIWNLVFMQFNRQADGTMLPLPKPSVDTGMGLERISAV 247
Query: 277 LQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPS 336
LQ V +NYE DL +I +++ S D N +L++I DH+R+ +L+SDGV PS
Sbjct: 248 LQHVNSNYEIDLFRTLIAAVAKVVGTS-----DLNNKSLRVIADHIRSCAFLVSDGVMPS 302
Query: 337 NIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQ 396
N RGYV+RR+IRRA+R G +LG F + IE+ ++K+++
Sbjct: 303 NENRGYVLRRIIRRAIRHGNMLGATD--------TFFYKLVAPLIEVMGPAADELKSQQA 354
Query: 397 RILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPV 456
+ + LK EE +F +TLERG LLD+ + + T L G+ AF LYDT+GFP+
Sbjct: 355 IVEQALKTEEEQFARTLERGLSLLDEEIKNLQGDT--------LDGETAFRLYDTYGFPI 406
Query: 457 EITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYD 516
++T +V E G+ VD +GFD M+ QR Q A A VD + +L T F GY+
Sbjct: 407 DLTADVCRERGLKVDEEGFDRAMDAQR---QRAREASGFGVDYN-NLVRVDAKTPFCGYE 462
Query: 517 TLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQT 576
+ V +L NG V +V+ G D V+LN TPFY ESGGQ+GD G L +G N
Sbjct: 463 QTRQQEKVIALYHNGNAVDQVAAGEDAVVILNETPFYGESGGQVGDQGEL---KGVNVSF 519
Query: 577 AVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALK 636
AV + + +++G H G + +GVL V VEAIVD + R R +++H+ATHLL AAL+
Sbjct: 520 AVQDTQKYGQAIG----HIGRLTQGVLRVNDSVEAIVDSERRNRIRLNHSATHLLHAALR 575
Query: 637 KVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDD 696
+V+G +Q GSLV LRFDF+ + ++ ++E ++N I +QT++MAL D
Sbjct: 576 QVLGDHVAQKGSLVNDSYLRFDFSHSEAMKPGQVRQVEDIVNAQIRRNLAIQTEIMALSD 635
Query: 697 AKRAGAIAMFGEKYGEQVKI 716
AK GA+A+FGEKY + V++
Sbjct: 636 AKEKGAMALFGEKYEDHVRV 655
>gi|92117171|ref|YP_576900.1| alanyl-tRNA synthetase [Nitrobacter hamburgensis X14]
gi|91800065|gb|ABE62440.1| alanyl-tRNA synthetase [Nitrobacter hamburgensis X14]
Length = 897
Score = 550 bits (1418), Expect = e-154, Method: Compositional matrix adjust.
Identities = 303/682 (44%), Positives = 425/682 (62%), Gaps = 43/682 (6%)
Query: 51 DSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATS 109
+ IR FL+++A+ GH+++PS+ LVP DPT++ T AGM+QFK +F G R RA TS
Sbjct: 11 NDIRSAFLNYFAANGHEIVPSSPLVPRNDPTLMFTNAGMVQFKNVFTGVEKRPYQRATTS 70
Query: 110 QRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANR 165
Q+C+R ND++NVG T+RHHTFFEMLGNFSFGDYFK AI+ AW+ T EFGLP ++
Sbjct: 71 QKCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKDRAIELAWKLVTEEFGLPKDK 130
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDR- 224
L +VY DDDEAF +W K G+P I R+ DNFW G TGPCGPCSEI+YD H D+
Sbjct: 131 LIATVYIDDDEAFGLWKKIAGLPDSRIIRIAGADNFWQMGDTGPCGPCSEIFYD-HGDKI 189
Query: 225 -----GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQK 279
G D D GD RF+E +NLVFMQY K DGS L + +IDTG GLER+A +LQ
Sbjct: 190 PGGPPGSPDED-GD--RFVEIWNLVFMQYEKLPDGSRLNLPKPSIDTGAGLERVAAVLQG 246
Query: 280 VPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIG 339
+NY+ DL +I+ A++L A + +L++I DHLRA +L++DGV PSN G
Sbjct: 247 KHDNYDIDLFVALIRAAADLTG---ADPHGPMKASLRVIADHLRATSFLIADGVLPSNEG 303
Query: 340 RGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRIL 399
RGYV+RR++RRA+R +LLG K L G + + E EL R + ++
Sbjct: 304 RGYVLRRIMRRAMRHAQLLGAKEPLMWRLVGVLVREMGEAFPELQ---------RARPLI 354
Query: 400 EE-LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEI 458
EE L+ EE RF +TLERG +LD+ S + + G + G+ AF LYDT+GFP+++
Sbjct: 355 EETLRLEETRFRKTLERGLSILDEK-----SASLKKGDM--FDGETAFTLYDTYGFPLDL 407
Query: 459 TKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSA--DLAEKIPDTEFLGYD 516
T++ G+ VD+ F ME Q+ +++A+ + + ++ L EK+ TEFLGY+
Sbjct: 408 TQDALRARGIGVDIASFTDAMEQQKAKARASWSGSGEAATETIWFPLREKLGATEFLGYE 467
Query: 517 TLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQT 576
T A+ V +L+ +GK + G ++LN+TPFY ESGGQ+GD G L
Sbjct: 468 TEIAEGAVAALVKDGKEADSLKAGESGAIVLNQTPFYGESGGQVGDTGIL------TGDG 521
Query: 577 AVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALK 636
V V D +K G +FVH GT+ +G L G + VD R + +H+ATHLL AL+
Sbjct: 522 VRVRVTDTQKKAGDLFVHLGTVEQGTLTPGMALALEVDRARRGAIRANHSATHLLHEALR 581
Query: 637 KVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDD 696
+V+G +Q GSLVA +RLRFDF ++P+ EL IE + N + + + T++MA+DD
Sbjct: 582 QVLGDHIAQRGSLVAPERLRFDFVHNKPISADELRRIEDIANDVVLENGEVTTRLMAVDD 641
Query: 697 AKRAGAIAMFGEKYGEQVKISS 718
A+ AGA A+FGEKYG++V++ S
Sbjct: 642 AREAGARALFGEKYGDEVRVVS 663
>gi|156932779|ref|YP_001436696.1| alanyl-tRNA synthetase [Cronobacter sakazakii ATCC BAA-894]
gi|205830089|sp|A7MJ41.1|SYA_CROS8 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|156531033|gb|ABU75859.1| hypothetical protein ESA_00569 [Cronobacter sakazakii ATCC BAA-894]
Length = 875
Score = 550 bits (1418), Expect = e-154, Method: Compositional matrix adjust.
Identities = 318/689 (46%), Positives = 435/689 (63%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTAQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP +R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQYAWELLTGEQWFNLPKDR 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NYE DL +IK +ANV+ A D +N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYEIDLFQKLIKA---VANVTGA--TDLSNKSLRVIADHIRSCAFLIADGVIP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRA+R G +LG K F + +++ ++K ++
Sbjct: 302 SNENRGYVLRRIIRRAIRHGNMLGAKD--------TFFYKLVGPLVDVMGVAGEELKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ L+ T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELSKLTGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQ------AAHNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRARESSGFGADYNAM-IRVDGA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD A V +L V+GK V +V+ G V+L+ TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDHTELTAKVTALFVDGKSVEQVTAGQQAVVVLDETPFYAESGGQVGDKGELKGN 515
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
T V D +K G H G + GVL+VG V+A VD R R +++H+ATH
Sbjct: 516 GFT------FTVNDTQK-YGQAIGHIGELASGVLKVGEGVKAEVDHARRDRIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G +Q GSLV LRFDF+ + E+ ++E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVAQKGSLVNDKGLRFDFSHFEAMKPEEIRKVEDLVNAQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
VM L+ AK GA+A+FGEKY ++V++ S
Sbjct: 629 NVMDLEAAKAKGAMALFGEKYEDRVRVLS 657
>gi|167587422|ref|ZP_02379810.1| alanyl-tRNA synthetase [Burkholderia ubonensis Bu]
Length = 874
Score = 550 bits (1418), Expect = e-154, Method: Compositional matrix adjust.
Identities = 301/679 (44%), Positives = 421/679 (62%), Gaps = 44/679 (6%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR++FL F+ S+GH ++ S+SLVP DPT++ T +GM+QFK +FLG R RA TSQR
Sbjct: 6 IREKFLKFFESKGHTIVRSSSLVPGNDPTLMFTNSGMVQFKDVFLGTESRPYTRATTSQR 65
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AI++AWE T + LP +LW
Sbjct: 66 SVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIRFAWELLTTVYQLPKEKLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYYDF 220
++VY++DDEA++IW KEVGVP E I R+G A DNFW G TGPCGPC+EI+YD
Sbjct: 126 VTVYQEDDEAYDIWAKEVGVPTERIIRIGDNKGARYASDNFWTMGDTGPCGPCTEIFYDH 185
Query: 221 HPD--RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQ 278
PD G D R+IE +NLVFMQ+N+ G++ L + +DTG+GLER+A +LQ
Sbjct: 186 GPDVWGGPPGSPEEDGDRYIEIWNLVFMQFNRDAQGNMTRLPKPCVDTGMGLERLAAVLQ 245
Query: 279 KVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNI 338
V +NYE DL +IK A+ + +S D N +LK+I DH+RA +L+ DGV P N
Sbjct: 246 HVHSNYEIDLFQNLIKAAARVTEIS-----DLNNNSLKVIADHIRACSFLIVDGVIPGNE 300
Query: 339 GRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRI 398
GRGYV+RR++RRA+R G LG KG F +A+ E+ ++K EQR+
Sbjct: 301 GRGYVLRRIVRRAIRHGYKLGRKGS-------FFHKLVADLVAEMGVAY-PELKEAEQRV 352
Query: 399 LEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEI 458
+ L++EE RF +T+E G +L+ LA+ ++ G V L G+ AF L+DT+GFP+++
Sbjct: 353 TDVLRQEEERFFETIEHGMSILEAALAEVEAK---GGKV--LDGELAFKLHDTYGFPLDL 407
Query: 459 TKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTL 518
T +V E G++VD FD M QR Q++AA + L T F GY+ +
Sbjct: 408 TADVCRERGMTVDEPAFDDAMARQREQARAAGK-----FKAAQGLEYSGAKTTFHGYEEI 462
Query: 519 S-AKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTA 577
+ A V +L V+G V +V G D V+L+ TPFYAESGGQ+GD G L N T
Sbjct: 463 AFDDAKVVALYVDGSSVNEVKTGQDAVVVLDHTPFYAESGGQVGDQGVL-----ANASTR 517
Query: 578 VVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKK 637
V D K V H GT+ +G L+VG + A +D R R + +H+ATHL+ AL++
Sbjct: 518 FA-VGDTLKVQADVIGHHGTLEQGTLKVGDVLRAEIDAHRRARTQRNHSATHLMHKALRE 576
Query: 638 VIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDA 697
V+G Q GSLV D+ RFDF + P+ D E+ +E+++N I +VM D+A
Sbjct: 577 VLGSHVQQKGSLVDADKTRFDFAHNAPMTDDEIRRVEQIVNDEILANAPGIVRVMPYDEA 636
Query: 698 KRAGAIAMFGEKYGEQVKI 716
+ GA+A+FGEKYG++V++
Sbjct: 637 VKGGAMALFGEKYGDEVRV 655
>gi|54297712|ref|YP_124081.1| alanyl-tRNA synthetase [Legionella pneumophila str. Paris]
gi|59798487|sp|Q5X4B7.1|SYA_LEGPA RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|53751497|emb|CAH12915.1| alanyl-tRNA synthetase [Legionella pneumophila str. Paris]
Length = 860
Score = 550 bits (1418), Expect = e-154, Method: Compositional matrix adjust.
Identities = 306/676 (45%), Positives = 433/676 (64%), Gaps = 45/676 (6%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FL+++ RGH+++ S+SLVP DPT+L T AGM+QFK +FLG R RAAT+QR
Sbjct: 6 IRQAFLNYFVQRGHQIVASSSLVPSNDPTLLFTNAGMVQFKDLFLGLETRSYQRAATAQR 65
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK+EAIQ+AWEF T +PA RLW
Sbjct: 66 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKREAIQYAWEFLTEVLHIPAERLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPD---- 223
++VY++D EA +IW KE+ V E R G DNFW+ G TGPCGPC+EI+YD P+
Sbjct: 126 VTVYKEDLEAEDIWLKEMKVSPERFSRCGEKDNFWSMGDTGPCGPCTEIFYDHGPEVAGG 185
Query: 224 -RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPN 282
G D D GD R+IE +NLVFMQ+N+ +G L L + ++DTG+GLER+A ++Q V +
Sbjct: 186 PPGSPDED-GD--RYIEIWNLVFMQFNRDREGHLHLLPKPSVDTGMGLERLAAVIQGVHS 242
Query: 283 NYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGY 342
NYE D +IK ++L Q+ D + +LK+I DH+R+ +L+ DGV PSN GRGY
Sbjct: 243 NYEIDSFQYLIKAIAQL-----GQNIDLNHTSLKVIADHIRSCSFLIVDGVLPSNEGRGY 297
Query: 343 VVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEEL 402
V+RR+IRRAVR G LG+ L + + + EL I+S KA +RIL++
Sbjct: 298 VLRRIIRRAVRHGNKLGLPSPFFFKLVQPLIDVMGDAYPEL---INS--KAHIERILQQ- 351
Query: 403 KREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEV 462
EE +F +TLE+G +LL + + + LSG+ AF LYDT+GFP+++T ++
Sbjct: 352 --EENQFTRTLEQGLRLLQDHIKNLKGQ--------ELSGEVAFKLYDTYGFPIDLTADI 401
Query: 463 AEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTLSAKA 522
E G+ +DM+ F+ M+ QR QSQAA + + D A +++ +EF GY+ S +A
Sbjct: 402 IREQGLHIDMEAFNQLMQQQREQSQAAS---QFTTDYHA-VSQLDHQSEFHGYEKESMEA 457
Query: 523 IVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVK 582
+ LL G V ++KG+ V+L+ TPFYAESGGQ+GD G L G N +V
Sbjct: 458 KIIGLLQEGNEVKSINKGAKGAVILDHTPFYAESGGQVGDKGLLI---GKN---CSFQVD 511
Query: 583 DVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQE 642
D +K +G VH G + +G L + + A VD R +++HTATHLL AALKK++GQ
Sbjct: 512 DTQK-VGQAVVHYGEVIKGELTLDLSIHAQVDHIRRDAIRLNHTATHLLHAALKKIVGQH 570
Query: 643 TSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGA 702
Q GSLV +R RFDF+ L ++++IE ++N I N + T+VM ++ AK++GA
Sbjct: 571 VQQRGSLVDAERARFDFSHFEALNPQQIQQIEEVVNAQIRANNEVITQVMDIESAKQSGA 630
Query: 703 IAMFGEKYGEQVKISS 718
+A+FGEKY + V++ S
Sbjct: 631 VALFGEKYSDAVRVLS 646
>gi|33592894|ref|NP_880538.1| alanyl-tRNA synthetase [Bordetella pertussis Tohama I]
gi|384204193|ref|YP_005589932.1| alanyl-tRNA synthetase [Bordetella pertussis CS]
gi|41018186|sp|Q7VXE1.1|SYA_BORPE RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|33572542|emb|CAE42122.1| alanyl-tRNA synthetase [Bordetella pertussis Tohama I]
gi|332382307|gb|AEE67154.1| alanyl-tRNA synthetase [Bordetella pertussis CS]
Length = 874
Score = 550 bits (1418), Expect = e-154, Method: Compositional matrix adjust.
Identities = 306/679 (45%), Positives = 413/679 (60%), Gaps = 46/679 (6%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR++FL F+ S+GH ++PS+SLVP DPT+L T +GM+QFK +F GK R RA +SQR
Sbjct: 6 IRQKFLQFFQSKGHTIVPSSSLVPANDPTLLFTNSGMVQFKDVFTGKEARAYKRATSSQR 65
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK+EAIQ+AWE T + LPA +LW
Sbjct: 66 SVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKREAIQYAWELLTQVYKLPAEKLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYYDF 220
++VY++DDEA++IW KEVGVP E I R+G A DNFW TGPCGPCSEI+YD
Sbjct: 126 VTVYQEDDEAYDIWAKEVGVPAERIIRIGDNKGARYASDNFWQMADTGPCGPCSEIFYDH 185
Query: 221 HPD--RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQ 278
P+ G D R+IE +NLVFMQ+ + G++E L + +DTG+GLERIA +LQ
Sbjct: 186 GPEIWGGPPGSPEEDGDRYIEIWNLVFMQFERDAAGNMERLPKPCVDTGMGLERIAAVLQ 245
Query: 279 KVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNI 338
V +NYE DL +I A+ V D + +LK+I DH+RA +L+ DG+ PSN
Sbjct: 246 HVHSNYEIDLFQKLIAAAARETGV-----KDLADNSLKVIADHIRACAFLIVDGIIPSNE 300
Query: 339 GRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRI 398
GRGYV+RR++RRA+R G LG L + + E EL+ +R+
Sbjct: 301 GRGYVLRRIVRRALRHGYKLGQTKSFFHRLVPDLVAEMGEAYPELAQ--------VAERV 352
Query: 399 LEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEI 458
+ L++EE RF +TLE G K+LD LA + + P L G F LYDT+GFPV++
Sbjct: 353 AQVLRQEEERFGETLEHGMKILDGALA------KVAKGDP-LDGTTLFTLYDTYGFPVDL 405
Query: 459 TKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTL 518
T ++ E V VDM GF+ M+ QR Q++AA K++ S + AE T F GY+ L
Sbjct: 406 TADICREREVEVDMAGFEAAMQRQREQARAA-GKFKMAEGLSYEGAE----TRFEGYENL 460
Query: 519 SAKAI-VESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTA 577
+ V +L V G V +VS G D V+L+ TPFYAESGGQ+GD G L
Sbjct: 461 ELSGVKVTALYVEGTQVEQVSAGQDAVVVLDATPFYAESGGQVGDTGLL------EAGGV 514
Query: 578 VVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKK 637
V D K VF H GT+ G L+VG + A VD R R +H+ATHL+ AL++
Sbjct: 515 RFAVADTLKIQPGVFGHHGTLEAGALKVGDTLLARVDAVRRARTVRNHSATHLMHKALRE 574
Query: 638 VIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDA 697
V+G Q GSLV D+ RFDF P+ ++ +E ++N + + KVMA DDA
Sbjct: 575 VLGAHVQQRGSLVDPDKTRFDFAHDAPMTAEQIARVEAIVNAEVLANQATEAKVMAYDDA 634
Query: 698 KRAGAIAMFGEKYGEQVKI 716
+ GA+A+FGEKYG+ V++
Sbjct: 635 VKGGAMALFGEKYGDTVRV 653
>gi|410618271|ref|ZP_11329222.1| alanyl-tRNA synthetase [Glaciecola polaris LMG 21857]
gi|410162193|dbj|GAC33360.1| alanyl-tRNA synthetase [Glaciecola polaris LMG 21857]
Length = 865
Score = 550 bits (1417), Expect = e-154, Method: Compositional matrix adjust.
Identities = 301/675 (44%), Positives = 428/675 (63%), Gaps = 44/675 (6%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+A +GH+ + S+SLVP +DPT+L T AGM QFK +FLG R+ RA +SQR
Sbjct: 8 IRQAFLDFFADKGHQKVSSSSLVPGDDPTLLFTNAGMNQFKDVFLGTEQRKYTRAVSSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AI +AW F T E LP ++L
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHQAIGYAWSFLTEELKLPKDKLL 127
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDF--HPDRG 225
++VY +DDEAF+IW+K++G+P + I R+ DNFW+ G TGPCGPCSE++YD H G
Sbjct: 128 VTVYSEDDEAFDIWHKDIGLPKDKIIRIATSDNFWSMGDTGPCGPCSEVFYDHGEHIWGG 187
Query: 226 CSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYE 285
D RFIE +NLVFMQ+N++ +G ++PL + +IDTG+GLERI+ ILQ V +NYE
Sbjct: 188 PPGSPEEDGDRFIEIWNLVFMQFNRQANGDMQPLPKPSIDTGMGLERISAILQNVHSNYE 247
Query: 286 TDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVR 345
D+ +IK ++L V +D++ L+++ DH+R+ +L++DGV PSN GRGYV+R
Sbjct: 248 IDIFQNLIKATADL--VGTTSLDDKS---LRVVADHIRSCSFLITDGVMPSNEGRGYVLR 302
Query: 346 RLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEE--LK 403
R+IRRAVR G LG G L GA + + EL+ EQR + E L+
Sbjct: 303 RIIRRAVRHGNKLGANGVFFYKLVGALAQEMGDAYPELN----------EQRAIIEKVLR 352
Query: 404 REELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVA 463
EE +F +TLERG +L+ LA+ + VP G F LYDT+GFP ++T +VA
Sbjct: 353 VEEEQFSRTLERGMLILNDTLAELDGKV-----VP---GDVVFKLYDTYGFPADLTNDVA 404
Query: 464 EEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTLSAKAI 523
E G+S+D +GFD M QR+++Q A + +D + L + ++ F+GY+ A
Sbjct: 405 REKGLSIDEEGFDQAMAEQRKRAQKAS---QFDLDYNEQLRSDL-ESVFVGYEQEQNTAQ 460
Query: 524 VESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKD 583
V + G+ V +++ G ++L+ +PFYAESGGQ GD G L +T V D
Sbjct: 461 VREIFFQGESVNELASGDKGTLILDESPFYAESGGQAGDIGVLA------SETGDFTVTD 514
Query: 584 VKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQET 643
K LG HKG I + VG +VEA +D K R K++H+ATHL+ AALK ++G+
Sbjct: 515 TVK-LGKAIAHKG-IATSTIAVGDKVEAKLDGKRRHAIKLNHSATHLMHAALKSILGEHV 572
Query: 644 SQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAI 703
+Q GSLV +RLRFDF+ + ++ +E ++N I + LQT++M L+ AK AGA+
Sbjct: 573 NQKGSLVQAERLRFDFSHFEAMNKQQIAAVETMVNEQILANHALQTQLMGLEQAKEAGAM 632
Query: 704 AMFGEKYGEQVKISS 718
A+FGEKY + V++ S
Sbjct: 633 ALFGEKYDDDVRVVS 647
>gi|306820448|ref|ZP_07454084.1| alanine--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC
43715]
gi|304551523|gb|EFM39478.1| alanine--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC
43715]
Length = 880
Score = 550 bits (1417), Expect = e-154, Method: Compositional matrix adjust.
Identities = 300/677 (44%), Positives = 439/677 (64%), Gaps = 29/677 (4%)
Query: 50 GDSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
+ IRK FLDF+ S+ H V S SLVP+ D ++LL AGM K FLG R AT
Sbjct: 6 ANDIRKSFLDFFESKEHYVKNSFSLVPKNDKSLLLINAGMAPLKNYFLGIETPPAKRMAT 65
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
Q+C+RT D+EN+G+T+RH TFFEMLGNFSFGDYFK EA +AWEF T + +LW+
Sbjct: 66 CQKCVRTGDIENIGKTARHATFFEMLGNFSFGDYFKNEATAFAWEFVTKVLKMDEEKLWV 125
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSG-ATGPCGPCSEIYYDFHPDRGCS 227
+VYE+DDEA EIW +VGV + I ++G +DNFW G GPCGPCSEIY D + GC
Sbjct: 126 TVYEEDDEALEIWRDKVGVNPDRIVKLGKEDNFWEIGNGQGPCGPCSEIYIDRGEEFGCG 185
Query: 228 DVDL---GDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNY 284
D D RF+EF+NLVF Q++K+ DGS + L+ NIDTG+GLER+A I+Q V + +
Sbjct: 186 HKDCKPGCDCDRFLEFWNLVFTQFDKQVDGSYKKLEHPNIDTGMGLERMACIMQGVDSIF 245
Query: 285 ETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVV 344
+ D + I K E++ Y Q +++T+++++II DH+RAI +++SDG+ PSN GRGYV+
Sbjct: 246 DIDTMKNIRDKVCEISGKKY-QQDEKTDVSIRIITDHIRAITFMVSDGIVPSNEGRGYVL 304
Query: 345 RRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKR 404
RRL RRA+R +LLGI E F+ ++A I++ ++ I + LK
Sbjct: 305 RRLARRAMRHAKLLGI--------EQKFIETLANVVIDVYQDGYEELGQNRDYINKVLKI 356
Query: 405 EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAE 464
EE +F +T+E G +L+Q +AD+ + + +++GQDAF LYDT+GFP+E+T E+AE
Sbjct: 357 EEEKFGETIETGMNILNQYIADS-----QKANNSKINGQDAFKLYDTYGFPLELTLEIAE 411
Query: 465 EHGVSVDMKGFDIEMENQR---RQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTLSAK 521
E SVD++ F+ +ME QR R ++A + + D+ + L + +TEF+GY+ L K
Sbjct: 412 EKNCSVDIEEFENQMEMQRQRARNARAKGSDIGWK-DEISSLDLSVKNTEFIGYEKLEDK 470
Query: 522 AIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEV 581
A++ ++++GK K ++G ++ ++ ++TPFYAESGGQ+GD G + T ++V
Sbjct: 471 AVIADIVIDGKLSDKAAQGQEIILIFDKTPFYAESGGQVGDTGLI------KNATVEIQV 524
Query: 582 KDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQ 641
+V KS +F+H + +G L+ G +VE +VD K R +HTATHLL ALK V+G
Sbjct: 525 NNVTKSTNGLFLHHCKLNKGELKKGDKVELLVDVKNRFATMRNHTATHLLHKALKVVLGD 584
Query: 642 ETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAG 701
QAGSLV+ DRLRFDFN + EL ++E+L+N I +A +QT+VM ++DAK+ G
Sbjct: 585 HIQQAGSLVSPDRLRFDFNHFAQVSKEELMKVEQLVNEQIYNAIDVQTQVMDIEDAKKTG 644
Query: 702 AIAMFGEKYGEQVKISS 718
A+++F EKYGE V++ S
Sbjct: 645 AMSLFDEKYGETVRVLS 661
>gi|238756253|ref|ZP_04617569.1| Alanyl-tRNA synthetase [Yersinia ruckeri ATCC 29473]
gi|238705508|gb|EEP97909.1| Alanyl-tRNA synthetase [Yersinia ruckeri ATCC 29473]
Length = 874
Score = 550 bits (1417), Expect = e-154, Method: Compositional matrix adjust.
Identities = 314/689 (45%), Positives = 432/689 (62%), Gaps = 67/689 (9%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVSSSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRAYTRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AI +AWE T E F LP +
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAINFAWELLTSEKWFNLPKEK 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG------ADDNFWNSGATGPCGPCSEIYYD 219
LW++VYE DDEA++IW +VGVP E I R+G A DNFW G TGPCGPCSEI+YD
Sbjct: 128 LWVTVYETDDEAYDIWANDVGVPRERIIRIGDKGAAFASDNFWQMGDTGPCGPCSEIFYD 187
Query: 220 FHPDR------GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERI 273
H D G ++ D GD R+IE +N+VFMQ+N++ DG++ PL + ++DTG+GLERI
Sbjct: 188 -HGDHIWGGPPGSAEED-GD--RYIEIWNIVFMQFNRQSDGTMLPLPKPSVDTGMGLERI 243
Query: 274 ARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGV 333
A +LQ V NYE DL +I +++ S D ++ +L++I DH+R+ +L+SDGV
Sbjct: 244 AAVLQHVNTNYEIDLFRDLITAVADVTGAS-----DLSSKSLRVIADHIRSCAFLISDGV 298
Query: 334 FPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKA 393
PSN GRGYV+RR+IRRA+R G +LG K F + I + ++K
Sbjct: 299 IPSNEGRGYVLRRIIRRAIRHGNILGAKE--------TFFYKLVAPLITVMGPAADELKQ 350
Query: 394 REQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFG 453
++ + + LK EE +F +TLERG LLD+ L+ T L G+ AF LYDT+G
Sbjct: 351 QQAMVEQVLKTEEEQFARTLERGLALLDEELSQLTGDT--------LDGETAFRLYDTYG 402
Query: 454 FPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQ------AAHNAVKLSVDDSADLAEKI 507
FPV++T +V E + VD GF+ ME QRR+++ A +N++ + VD +
Sbjct: 403 FPVDLTADVCRERNLKVDEAGFEQAMEAQRRRARESSGFGADYNSL-IRVDTA------- 454
Query: 508 PDTEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLY 567
+EFLGYD + +A V +L NG+ V +V G D V+LN+TPFY ESGGQ+GD G L
Sbjct: 455 --SEFLGYDHIEQQATVIALFRNGEAVDEVHTGEDAVVVLNQTPFYGESGGQVGDEGVL- 511
Query: 568 VTQGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTA 627
A V D +K G H G + G+L V V+A+VD R R +++H+A
Sbjct: 512 -----KSAMADFIVSDTQK-YGQAIGHLGQLSRGILRVNDSVDAVVDSMRRNRIRLNHSA 565
Query: 628 THLLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLL 687
THLL AAL+K +G+ +Q GSLV LRFDF+ + ++ ++E L+N I +
Sbjct: 566 THLLHAALRKTLGEHVAQKGSLVNDKYLRFDFSHFEAMKPEQIRQVEDLVNAQIRRNLPI 625
Query: 688 QTKVMALDDAKRAGAIAMFGEKYGEQVKI 716
QT++M LD+AK GA+A+FGEKY +QV++
Sbjct: 626 QTELMELDEAKEKGAMALFGEKYDDQVRV 654
>gi|2500961|sp|Q56273.1|SYA_THIFE RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|1263913|emb|CAA64818.1| alanyl-tRNA synthetase [Acidithiobacillus ferrooxidans]
Length = 877
Score = 550 bits (1417), Expect = e-153, Method: Compositional matrix adjust.
Identities = 295/675 (43%), Positives = 426/675 (63%), Gaps = 33/675 (4%)
Query: 52 SIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQ 110
+IR+ FL+++ +GH+++PS+ L+P DPT+L T AGM+ FK +FLG R RA +SQ
Sbjct: 5 AIRQAFLEYFVEQGHQIVPSSPLIPRNDPTLLFTNAGMVPFKDVFLGLETRPYRRAVSSQ 64
Query: 111 RCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRL 166
RC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK+E I +AW F T GLP +L
Sbjct: 65 RCMRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKREVIGFAWRFLTERLGLPPEKL 124
Query: 167 WISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGC 226
WI+VYE+DDEA +IW E+GV + R G DNFW+ G TGPCGPCSEI+YD P
Sbjct: 125 WITVYEEDDEAADIWMNEIGVDPARLSRCGEKDNFWSMGDTGPCGPCSEIFYDHGPHIPG 184
Query: 227 SDVDLG--DDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNY 284
D R+IE +NLVFMQ+++ G+L PL + ++DTG+GLER+A +LQ V NNY
Sbjct: 185 GPPGSPEEDGDRYIEIWNLVFMQFDRDSSGTLTPLPKPSVDTGMGLERLAAVLQGVHNNY 244
Query: 285 ETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVV 344
+TDL P+I A+ ++ +Y S+ T+++L+++ DH+RA +L++DGV P+N GRGYV+
Sbjct: 245 DTDLFKPLIAAAAAISGKTYG-SDAATDISLRVLADHIRACSFLITDGVLPANEGRGYVL 303
Query: 345 RRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEE-LK 403
RR+IRRAVR GR LG++ L + + EL+ R QR +E L+
Sbjct: 304 RRIIRRAVRHGRKLGMETVFFHQLVAPLVAEMGSAFPELT---------RAQREVERALE 354
Query: 404 REELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVA 463
REE RF +TLERG LL++ +AD + + G+ F L DTFGFPV++T ++A
Sbjct: 355 REETRFRETLERGLSLLEEAIADLAAGA-------AIPGEIIFRLADTFGFPVDLTADIA 407
Query: 464 EEHGVSVDMKGFDIEMENQRR--QSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTLSAK 521
E + +DM+G++ M ++R + + + DLA ++P TEF GY T + +
Sbjct: 408 RERDLIMDMEGYEAAMADERSPLPCRLGGSGEVKTERVYHDLAMRLPVTEFTGYSTCADE 467
Query: 522 AIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEV 581
V +L+ +G+ V + G V+L+RTPFY ESGGQ GD G L A+ V
Sbjct: 468 GKVVALIRDGEEVAFLEAGDMGVVILDRTPFYGESGGQAGDRGEL------QSNDALFAV 521
Query: 582 KDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQ 641
D +K +G + VH G + G L++G V A VD R+ HH+ATHLL AAL+ ++G
Sbjct: 522 TDTQKPMGHLHVHLGRVESGRLQIGDMVVASVDEVARRATAAHHSATHLLHAALRNILGS 581
Query: 642 ETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAG 701
Q GSLV +RLRFDF+ P+ +L EIER++N I + +T+++ + +A+ G
Sbjct: 582 HVQQKGSLVNPERLRFDFSHPEPVTAAQLREIERVVNAAIRNNVGAETRILPVAEAQALG 641
Query: 702 AIAMFGEKYGEQVKI 716
A+A+FGEKYG++V++
Sbjct: 642 AMALFGEKYGDEVRV 656
>gi|429332663|ref|ZP_19213377.1| alanyl-tRNA synthetase [Pseudomonas putida CSV86]
gi|428762651|gb|EKX84852.1| alanyl-tRNA synthetase [Pseudomonas putida CSV86]
Length = 873
Score = 550 bits (1417), Expect = e-153, Method: Compositional matrix adjust.
Identities = 304/682 (44%), Positives = 431/682 (63%), Gaps = 48/682 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FL F+ +GH + S+SL+P DPT+L T AGM QFK FLG+ R RA +SQ+
Sbjct: 6 IREAFLRFFEEQGHTRVASSSLIPGNDPTLLFTNAGMNQFKDCFLGQEKRAYTRAVSSQK 65
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI +AW F T E LP ++
Sbjct: 66 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAITFAWTFLTSEKWLNLPKDK 125
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VY DDEA++IW KEVGVP E + R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 126 LWVTVYATDDEAYDIWTKEVGVPAERMVRIGDNKGAPYASDNFWTMGDTGPCGPCTEIFY 185
Query: 219 DFHPD--RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARI 276
D D G D R+IE +N VFMQ+N+ DG L PL ++DTG+GLERI+ +
Sbjct: 186 DHGADIWGGPPGSPEEDGDRYIEIWNNVFMQFNRTADGVLHPLPAPSVDTGMGLERISAV 245
Query: 277 LQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPS 336
LQ V +NYE DL ++ +++ + D +LK++ DH+R+ +L++DGV PS
Sbjct: 246 LQHVHSNYEIDLFQSLLAASAKAIGCT-----DEGQPSLKVVADHIRSCGFLIADGVVPS 300
Query: 337 NIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQ 396
N GRGYV+RR+IRRA R G LG KG + A + + + EL T +A +
Sbjct: 301 NEGRGYVLRRIIRRACRHGNKLGAKGSFFYQIVAALVAEMGDAFPELKTQ-----QAHIE 355
Query: 397 RILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPV 456
R+L K EE +F +TLE+G K+L+Q LAD G+V + G+ F LYDT+GFP+
Sbjct: 356 RVL---KTEEEQFAKTLEQGLKILEQDLADL------KGNV--IPGEVVFKLYDTYGFPM 404
Query: 457 EITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYD 516
++T ++A E +S+D +GF+ EME QR ++++A +A L D L + DTEFLGY
Sbjct: 405 DLTADIARERELSIDEEGFEREMEAQRERARSA-SAFGL---DYNSLVKVDVDTEFLGYS 460
Query: 517 TLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQT 576
A + +L +G+ V ++ +G + V+L+RTPFYAESGGQIGD G+L
Sbjct: 461 ATEGSAKIVALYKDGQSVEQLGEGEEGVVILDRTPFYAESGGQIGDTGYLQAG------A 514
Query: 577 AVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALK 636
A +V+D K+ G F+H G I G L VG +VEA VD +++ ++H+ATHLL AAL+
Sbjct: 515 ARFDVRDTTKT-GGAFLHHGVIASGKLVVGAQVEARVDADVQKATALNHSATHLLHAALR 573
Query: 637 KVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDD 696
+V+G+ Q GSLV RLRFDF+ + +++ +E ++N I + +QT+ +D
Sbjct: 574 QVLGEHVQQKGSLVNSQRLRFDFSHPEAVKPEQIKALEEIVNREIRRNSEVQTEETDIDT 633
Query: 697 AKRAGAIAMFGEKYGEQVKISS 718
AK+ GA+A+FGEKYG+ V++ S
Sbjct: 634 AKQKGAMALFGEKYGDSVRVLS 655
>gi|209694226|ref|YP_002262154.1| alanyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
gi|208008177|emb|CAQ78320.1| alanyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
Length = 860
Score = 550 bits (1417), Expect = e-153, Method: Compositional matrix adjust.
Identities = 309/685 (45%), Positives = 430/685 (62%), Gaps = 48/685 (7%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S D +R+ FL F+ S+GH+++ S+SLVP DPT+L T AGM QFK FLG R RA
Sbjct: 4 STDEVRRAFLAFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDCFLGSEKRSYTRAT 63
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
T+QRC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI++AWEF T LPA
Sbjct: 64 TAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKQDAIKYAWEFLTERLELPA 123
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEI 216
+RL +++YE DDEAFEIWNKE+G+P + I R+G A DNFW G TGPCGPC+EI
Sbjct: 124 DRLLVTIYETDDEAFEIWNKEMGIPADRIVRIGDNKGAPYASDNFWQMGDTGPCGPCTEI 183
Query: 217 YYDF--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIA 274
+YD H G D RFIE +N VFMQ+N+ DG++EPL + ++DTG+G+ERIA
Sbjct: 184 FYDHGEHIWGGRPGTPEEDGDRFIEIWNNVFMQFNRLADGTMEPLPKPSVDTGMGIERIA 243
Query: 275 RILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVF 334
I+Q V +NYE D+ +IK+ +++ V Y +D +N +L+++ DH+R+ YL+ DGV
Sbjct: 244 AIMQGVHSNYEIDIFQTLIKETAKV--VGY---DDLSNQSLRVVADHIRSCSYLIVDGVM 298
Query: 335 PSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAR 394
PSN GRGYV+RR+IRRAVR G LG KG L G + EL +
Sbjct: 299 PSNEGRGYVLRRIIRRAVRHGNKLGAKGSYFYKLVGPLAEIMGTAGEELK---------K 349
Query: 395 EQRILEE-LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFG 453
+Q ++E+ LK EE F +TLERG +L++ L D L G+V L G+ F LYDT+G
Sbjct: 350 QQALVEKVLKIEEENFGRTLERGMVILNEAL-DNL-----EGTV--LDGETVFKLYDTYG 401
Query: 454 FPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFL 513
FP ++T +VA E +++D GF+ M QR Q A A + D +A + + +T F
Sbjct: 402 FPADLTNDVARERELTIDEDGFEKAMNEQR---QRAREAGQFGTDYNAVIKVE-SETVFH 457
Query: 514 GYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTN 573
GYD AKA V + G+ V +S G D ++L+ TPFYAESGGQ GD G + V G
Sbjct: 458 GYDFTEAKATVLEIFCEGEAVETLSAGDDAILILDVTPFYAESGGQSGDAGIITVEAG-- 515
Query: 574 QQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQA 633
+ V + + V ++G H G + EGVL A VD + R ++H+ATHLL A
Sbjct: 516 -KFVVTDTQKVGNAIG----HHGKLVEGVLSTADRAMAQVDEERRTAITLNHSATHLLHA 570
Query: 634 ALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMA 693
AL++V+G+ +Q GSLV + LRFDF+ + EL +ER++N + + ++T +M
Sbjct: 571 ALRQVLGEHVTQKGSLVKAESLRFDFSNLEGVKPEELRLVERIVNQQVRLNHAIETDLMD 630
Query: 694 LDDAKRAGAIAMFGEKYGEQVKISS 718
+D AK GA+A+FGEKY ++V++ S
Sbjct: 631 VDAAKEKGAMALFGEKYDDEVRVLS 655
>gi|78044932|ref|YP_359396.1| alanyl-tRNA synthetase [Carboxydothermus hydrogenoformans Z-2901]
gi|123576855|sp|Q3AEN8.1|SYA_CARHZ RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|77997047|gb|ABB15946.1| alanyl-tRNA synthetase [Carboxydothermus hydrogenoformans Z-2901]
Length = 874
Score = 550 bits (1417), Expect = e-153, Method: Compositional matrix adjust.
Identities = 307/671 (45%), Positives = 437/671 (65%), Gaps = 28/671 (4%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR++FL F+ S+GHK+LPSASL+P DP++L T AGM+ FKP F G +V R T Q+
Sbjct: 6 IREKFLKFFESKGHKILPSASLIPANDPSLLWTAAGMVPFKPYFTGAAVPEVRRVTTCQK 65
Query: 112 CIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWISVY 171
C+RT D+E+VGRT+RHHTFFEMLGNFSFGDYFKKEAI WAWEF T G+ ++L+I++Y
Sbjct: 66 CLRTPDIESVGRTARHHTFFEMLGNFSFGDYFKKEAITWAWEFVTEHLGISKDKLYITIY 125
Query: 172 EDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSDVDL 231
DDDEAF+IW+ VGVP E I R+G D NFW G GPCGPCSEIY D P++GC D
Sbjct: 126 LDDDEAFDIWHNVVGVPAERITRLGKDTNFWEIG-VGPCGPCSEIYVDLGPEKGCGSPDC 184
Query: 232 G---DDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDL 288
G D RF+E +NLVF+Q+ + + G+ PL+QK IDTG+GLER+A +LQ VP+N++TD+
Sbjct: 185 GVACDCGRFLEIWNLVFIQFFRDEQGNYTPLEQKGIDTGMGLERVASVLQGVPSNFDTDI 244
Query: 289 IFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLI 348
I+ A+++ V Y +++ ++ LK+I DH RAI + ++DG PSN GRGYV+RRL+
Sbjct: 245 FREIMDYAAQILGVKYGY-DEKVDVALKVIADHTRAITFAITDGALPSNEGRGYVIRRLL 303
Query: 349 RRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELR 408
RRA+R GRLL + E FL +A K IE + +++ + + L+ +K EE +
Sbjct: 304 RRALRFGRLL--------DREEPFLHLVAAKVIEQMGDVYPELREKAEHTLKIIKLEEEK 355
Query: 409 FVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGV 468
F +TL +G MLA+ + R + G + G AF LYDT+GFP+E+TKE+AEE G
Sbjct: 356 FRETLNQGL----SMLAELMERLTQEGK-KEIPGHLAFKLYDTYGFPIELTKEIAEEKGF 410
Query: 469 SVDMKGFDIEMENQRRQSQAAHNAVK-LSVDDS--ADLAEKIPDTEFLGYDTLSAKAIVE 525
+VD +GF +ME QRR+++ A V LS D+ L E++ + F+GY+ LS +
Sbjct: 411 TVDEEGFKQQMEEQRRRAREAREDVDYLSTRDAFLKQLKEELGEVTFVGYEKLSESTEII 470
Query: 526 SLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVK 585
+++ NG+ V ++ + E++ TPFY E GGQ+ D G + G + +V+ DV+
Sbjct: 471 AIIKNGQKVESLAAEEEGEIITRVTPFYPEGGGQVADKGEIL---GDGFKLSVL---DVE 524
Query: 586 KSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQ 645
K L +HK + EG ++VG + +VD R +HTATHLL ALK V+G+ +Q
Sbjct: 525 KPLSDFILHKVKVVEGSVKVGDKATLMVDETTRMSTARNHTATHLLHKALKMVLGEHVNQ 584
Query: 646 AGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAM 705
AGSLV +RLRFDF + D +L +IE ++N I L+Q LD+A++AG IA+
Sbjct: 585 AGSLVTPERLRFDFTHFEGVSDEDLRKIENIVNEAILRNLLVQIDYTTLDEARKAGVIAL 644
Query: 706 FGEKYGEQVKI 716
F EKYG+ V++
Sbjct: 645 FDEKYGDLVRV 655
>gi|440286460|ref|YP_007339225.1| alanyl-tRNA synthetase [Enterobacteriaceae bacterium strain FGI 57]
gi|440045982|gb|AGB77040.1| alanyl-tRNA synthetase [Enterobacteriaceae bacterium strain FGI 57]
Length = 875
Score = 550 bits (1417), Expect = e-153, Method: Compositional matrix adjust.
Identities = 311/689 (45%), Positives = 434/689 (62%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTAQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQYAWELLTGENWFALPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERI
Sbjct: 188 D-HGDHIWGGPPGTPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERITA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NYE DL +I +++ + D TN +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYEIDLFRKLIDSVAKVTGAT-----DLTNKSLRVIADHIRSCAFLIADGVTP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRA+R G +LG K F + I++ ++K ++
Sbjct: 302 SNENRGYVLRRIIRRAIRHGNMLGAKD--------TFFYKLVGPLIDVMGSAGEELKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ L+ T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELSKLTGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQ------AAHNAVKLSVDDSADLAEKIPD 509
V++T +V E G+ VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERGLKVDEAGFEAAMEEQRRRARESSGFGADYNAM-IRVDGA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD L V +L ++GK V V+ G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDHLELNGKVTALFIDGKAVESVAAGQEAVVILDQTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G +V + + +++G H G + G L+VG V+A VD R R +++H+ATH
Sbjct: 513 KGAGFSFSVNDTQKYGQAIG----HLGKLTAGSLKVGDAVQADVDEARRARIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++++G +Q GSLV LRFDF+ + E+ +E L+N I ++T
Sbjct: 569 LMHAALRQILGTHVAQKGSLVNDKVLRFDFSHFEAMKPEEIRAVEDLVNAQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
VM LD AK GA+A+FGEKY ++V++ S
Sbjct: 629 NVMDLDAAKAKGAMALFGEKYDDRVRVLS 657
>gi|90408728|ref|ZP_01216876.1| alanyl-tRNA synthetase [Psychromonas sp. CNPT3]
gi|90310179|gb|EAS38316.1| alanyl-tRNA synthetase [Psychromonas sp. CNPT3]
Length = 869
Score = 550 bits (1417), Expect = e-153, Method: Compositional matrix adjust.
Identities = 301/678 (44%), Positives = 425/678 (62%), Gaps = 41/678 (6%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S IR+ FLDF+A++GH+V+ S+SLVP DPT+L T AGM QFK FLG R RA
Sbjct: 6 STSEIRQGFLDFFANKGHQVVSSSSLVPANDPTLLFTNAGMNQFKDTFLGSEQRSYVRAT 65
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
+SQRC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI +AWE+ TVE GLP
Sbjct: 66 SSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAISFAWEYLTVELGLPK 125
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDF--H 221
+LWI+VY+ D EA +IW +E+GV + R+GA DNFW+ G TGPCGPC+EI+YD H
Sbjct: 126 EKLWITVYDKDPEAEKIWIEEIGVDPACLSRIGAKDNFWSMGDTGPCGPCTEIFYDHGEH 185
Query: 222 PDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVP 281
G D R+IE +NLVFMQYN+ DG++ L + ++DTG+GLERI+ ILQ
Sbjct: 186 IWGGPPGTPEEDGDRYIEIWNLVFMQYNRHADGTMVDLPKPSVDTGMGLERISAILQNCH 245
Query: 282 NNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRG 341
+NYE DL +IKK +E+ + D + +L+++ DH+R+ +L+ DGV PSN GRG
Sbjct: 246 SNYEIDLFQALIKKVAEVTGAT-----DLEDKSLRVVADHIRSCGFLICDGVMPSNEGRG 300
Query: 342 YVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEE 401
YV+RR+IRRAVR G LG +G + G + + + EL +++ +E+
Sbjct: 301 YVLRRIIRRAVRHGNKLGAQGVFFFKIYGELILQMGDTYPEL---------GKQRDFVEK 351
Query: 402 LKR-EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITK 460
+ R EE +F +TL RG ++LD L ES +SG+ F LYDT+GFP ++T
Sbjct: 352 ILRLEEEQFAKTLVRGLQILDNAL--------ESLEGNVISGETVFKLYDTYGFPADLTA 403
Query: 461 EVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTLSA 520
++A E + +D+ GF+ M+ QR +++ + +D EK T+FLGY+ L
Sbjct: 404 DIARERDLIIDIDGFNTLMDEQRTRAKKV-DHFGTDYNDGLKFDEK---TQFLGYEHLQH 459
Query: 521 KAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVE 580
A V L+ G+ V +++G V+L +TPFYAESGGQ+GD G L + G +
Sbjct: 460 SATVSILVKEGELVPALNQGEHGHVILKQTPFYAESGGQVGDSGRLVLKDG------IFN 513
Query: 581 VKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIG 640
V D KKS G F+H G + G + V E+ A VD + R+ +HH+ATHLL AAL++ +G
Sbjct: 514 VTDTKKS-GDTFLHIGYVESGNISVHDEIIAEVDSERRKAIALHHSATHLLHAALRQTLG 572
Query: 641 QETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRA 700
+ +Q GSL D+LRFDF+ L LE++ L+N I D + TK+ +++AK A
Sbjct: 573 EHVTQKGSLCDADKLRFDFSHFEGLSSQVLEQVNYLVNSAIRDNVSVLTKLSDIEEAKTA 632
Query: 701 GAIAMFGEKYGEQVKISS 718
GA+A+FGEKY E V++ S
Sbjct: 633 GAMALFGEKYDEMVRVVS 650
>gi|452129535|ref|ZP_21942110.1| alanyl-tRNA ligase [Bordetella holmesii H558]
gi|451923170|gb|EMD73312.1| alanyl-tRNA ligase [Bordetella holmesii H558]
Length = 873
Score = 550 bits (1417), Expect = e-153, Method: Compositional matrix adjust.
Identities = 307/682 (45%), Positives = 414/682 (60%), Gaps = 52/682 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR++FL F+ S+GH ++PS+SLVP DPT+L T +GM+QFK +F GK R RA +SQR
Sbjct: 6 IRQKFLQFFQSKGHTIVPSSSLVPGNDPTLLFTNSGMVQFKDVFTGKEKRPYSRATSSQR 65
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI++AWE T + LP +LW
Sbjct: 66 SVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAIRYAWELLTTVYKLPVEKLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYYDF 220
++VY++DDEA++IW KEVGVP E I R+G A DNFW G TGPCGPC+EI+YD
Sbjct: 126 VTVYQEDDEAYDIWAKEVGVPAERIIRIGDNKGARYASDNFWQMGDTGPCGPCTEIFYDH 185
Query: 221 HPD--RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQ 278
D G D R+IE +NLVFMQ+ + G++ L + +DTG+GLERIA +LQ
Sbjct: 186 GADIWGGPPGSAEEDGDRYIEIWNLVFMQFERDAAGTMTRLPKPCVDTGMGLERIAAVLQ 245
Query: 279 KVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNI 338
V +NYE DL +I A+ + ND + +LK+I DH+RA +L+ DGV PSN
Sbjct: 246 GVHSNYEIDLFQKLIAAAARETGI-----NDLEDNSLKVIADHIRACSFLIVDGVIPSNE 300
Query: 339 GRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRI 398
GRGYV+RR++RRA+R G LG L + + E EL+T QR+
Sbjct: 301 GRGYVLRRIVRRALRHGYKLGQTKPFFYRLVPDLVAEMGEAYPELAT--------TAQRV 352
Query: 399 LEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPR---LSGQDAFLLYDTFGFP 455
+ LK+EE RF +TLE G K+LD LA VP+ L G F LYDT+GFP
Sbjct: 353 AQVLKQEEERFGETLEHGMKILDVALA----------QVPKGGQLDGTTLFTLYDTYGFP 402
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGY 515
V++T ++ E V +DM GF+ ME QR Q++AA K++ S + A+ T F GY
Sbjct: 403 VDLTADICREREVEIDMPGFEAAMERQRDQARAA-GKFKMAEGLSYEGAQ----TRFEGY 457
Query: 516 DTLSAKAI-VESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQ 574
+ L + V +L V G V V G V+L+ TPFYAESGGQ+GD G L Q
Sbjct: 458 EQLELSGVHVTALYVGGTQVDAVQAGQQAVVVLDATPFYAESGGQVGDTGLL---QADGL 514
Query: 575 QTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAA 634
+ A V D K VF H G + EG L+VG + A VDP R R +H+ATHL+ A
Sbjct: 515 RFA---VGDTLKIQAGVFGHHGVLEEGTLKVGATLLARVDPVRRGRTVRNHSATHLMHKA 571
Query: 635 LKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMAL 694
L++V+G Q GSLV D+ RFDF P+ ++ +E ++N + Q +VMA
Sbjct: 572 LREVLGSHVQQRGSLVDPDKTRFDFAHDAPMTAEQIARVEGIVNAEVLANQPAQARVMAY 631
Query: 695 DDAKRAGAIAMFGEKYGEQVKI 716
DDA + GA+A+FGEKYG+ V++
Sbjct: 632 DDAVKGGAMALFGEKYGDTVRV 653
>gi|73540553|ref|YP_295073.1| alanyl-tRNA synthetase [Ralstonia eutropha JMP134]
gi|83305858|sp|Q474F4.1|SYA_CUPPJ RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|72117966|gb|AAZ60229.1| alanyl-tRNA synthetase [Ralstonia eutropha JMP134]
Length = 874
Score = 550 bits (1417), Expect = e-153, Method: Compositional matrix adjust.
Identities = 303/681 (44%), Positives = 414/681 (60%), Gaps = 44/681 (6%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR +FL F+ S+GH V+ S+SLVP DPT+L T +GM+QFK +FLG R RA +SQR
Sbjct: 6 IRSKFLQFFESKGHTVVRSSSLVPANDPTLLFTNSGMVQFKDVFLGTDKRPYSRATSSQR 65
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK+EAIQ+AWE T + LPA +LW
Sbjct: 66 SVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKREAIQYAWELLTKVYQLPAEKLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYYDF 220
++VY +DDEA++IW KEVGVP E I R+G A DNFW TGPCGPCSEI++D
Sbjct: 126 VTVYAEDDEAYDIWAKEVGVPTERIVRIGDNKGSRYASDNFWQMADTGPCGPCSEIFFDH 185
Query: 221 HPD--RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQ 278
PD G D R+IE +NLVFMQ+N+ + G++ PL + +DTG+GLERIA +LQ
Sbjct: 186 GPDVWGGPPGSPEEDGDRYIEIWNLVFMQFNRDEQGNMTPLPKPCVDTGMGLERIAAVLQ 245
Query: 279 KVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNI 338
V +NYE DL +IK A+ ++ N +LK+I DH+RA +L+ DGV P N
Sbjct: 246 HVHSNYEIDLFQALIKAAARETHIDNLNQN-----SLKVIADHIRACSFLIVDGVIPGNE 300
Query: 339 GRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRI 398
GRGYV+RR++RRA+R G LG K L + + E EL+ + R+
Sbjct: 301 GRGYVLRRIVRRAIRHGYKLGQKTPFFHKLVADLVAQMGEAYPELAD--------AQGRV 352
Query: 399 LEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEI 458
E LK EE RF +T+E G +LD LAD + ++ L G+ AF L+DTFGFP+++
Sbjct: 353 TEVLKAEEERFFETIENGMSILDAALADLKLKGGKT-----LDGELAFKLHDTFGFPLDL 407
Query: 459 TKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTL 518
T++V E ++VD FD M QR Q++AA K+ +A L T F GY+ L
Sbjct: 408 TQDVCREQEIAVDEAAFDAAMNRQREQARAA-GKFKM----AAGLEYSGDKTVFHGYEKL 462
Query: 519 S-AKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTA 577
+A + +L V+G V + G ++L+ TPFYAESGGQ GD G L A
Sbjct: 463 ELPQAKIIALYVDGAAVDAMQPGQTGVIVLDNTPFYAESGGQAGDQGVL------KAGNA 516
Query: 578 VVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKK 637
V V D K VF H+GT+ G L+VG V+ VD R R +H+ATHL+ AL++
Sbjct: 517 VFAVADTTKIQADVFGHQGTLEGGALKVGDTVQPQVDALRRARTVRNHSATHLMHKALRE 576
Query: 638 VIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDA 697
V+G Q GSLV D+ RFDF+ + P+ D ++ +E ++N I ++M DDA
Sbjct: 577 VLGTHVQQKGSLVDADKTRFDFSHNAPMTDEQIRRVEDIVNAEILRNEDTHAEIMPFDDA 636
Query: 698 KRAGAIAMFGEKYGEQVKISS 718
++GA+A+FGEKY + V++ S
Sbjct: 637 VKSGAMALFGEKYADDVRVLS 657
>gi|424056260|ref|ZP_17793781.1| alanyl-tRNA synthetase [Acinetobacter nosocomialis Ab22222]
gi|407441300|gb|EKF47806.1| alanyl-tRNA synthetase [Acinetobacter nosocomialis Ab22222]
Length = 878
Score = 550 bits (1417), Expect = e-153, Method: Compositional matrix adjust.
Identities = 301/683 (44%), Positives = 429/683 (62%), Gaps = 50/683 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FL ++ ++GH + S+SLVP DPT+L T AGM QFK FLG R RA TSQ+
Sbjct: 6 IREAFLRYFETQGHTRVASSSLVPANDPTLLFTNAGMNQFKDCFLGLEKRDYVRATTSQK 65
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND++NVG T+RHHTFFEMLGNFSFGDYFK++A+++AWEF T E LP +R
Sbjct: 66 CVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKRDALKFAWEFLTSEQWLALPKDR 125
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
L+++VY DDEA++IWNKE+G+ E I R+G A DNFW G TGPCGPCSEI++
Sbjct: 126 LYVTVYHTDDEAYDIWNKEIGLAPERIIRIGDNKGEKYASDNFWAMGDTGPCGPCSEIFF 185
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D RFIE +N VFMQ+N+ DG L PL ++DTG+GLERI+
Sbjct: 186 D-HGDHIWGGLPGSPEEDGDRFIEIWNNVFMQFNRTADGVLHPLPAPSVDTGMGLERISA 244
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL ++K A+ + + D +L+++ DH R+ +L++DGV P
Sbjct: 245 VLQHVNSNYDIDLFQHLLKAAANIIGIE-----DEGQPSLRVVADHARSCCFLIADGVNP 299
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN GRGYV+RR+IRRAVR G LG G F + + IE+ +++AR
Sbjct: 300 SNEGRGYVLRRIIRRAVRHGNKLGATG--------TFFYKMLQPLIEVMGQAYPELEARR 351
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
I L REE +F +TLE+G KLL+ LA +T + G F LYDT+GFP
Sbjct: 352 DVIEATLIREEEQFAKTLEQGLKLLEGELAQLKDKT--------IPGATVFKLYDTYGFP 403
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGY 515
++T ++A E G +D GF++EM QR Q A +A K +VD ++ + + +T+F GY
Sbjct: 404 TDLTADIARERGFIIDEAGFEVEMAAQR---QRARDAGKFAVDYNS-IVKVEGETQFDGY 459
Query: 516 DTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
+ + + ++ +G V +VS+G + ++LN+TPFYAESGGQIGD G +
Sbjct: 460 INTTGQGQIVAIYKDGVQVDEVSEGDEALIVLNQTPFYAESGGQIGDTGIF------KNE 513
Query: 576 TAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAAL 635
T + EV+D KKS G FVH+G + G L+ + VEAIV +R+ +H+ATHLL AAL
Sbjct: 514 TGIFEVQDTKKS-GGAFVHQGIVTVGNLKANQNVEAIVKADIREATARNHSATHLLHAAL 572
Query: 636 KKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALD 695
++++G Q GSLVA D LRFDF +P+ +L+++ERL+N I + T+++ ++
Sbjct: 573 RQILGSHVQQKGSLVASDILRFDFANDQPVSFEQLQQVERLVNAEIIANTPVTTELLDIE 632
Query: 696 DAKRAGAIAMFGEKYGEQVKISS 718
AK GA+ +FGEKYG++V++ S
Sbjct: 633 AAKAKGAMMLFGEKYGDEVRVLS 655
>gi|205830261|sp|Q1QMV7.2|SYA_NITHX RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
Length = 891
Score = 550 bits (1416), Expect = e-153, Method: Compositional matrix adjust.
Identities = 303/682 (44%), Positives = 425/682 (62%), Gaps = 43/682 (6%)
Query: 51 DSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATS 109
+ IR FL+++A+ GH+++PS+ LVP DPT++ T AGM+QFK +F G R RA TS
Sbjct: 5 NDIRSAFLNYFAANGHEIVPSSPLVPRNDPTLMFTNAGMVQFKNVFTGVEKRPYQRATTS 64
Query: 110 QRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANR 165
Q+C+R ND++NVG T+RHHTFFEMLGNFSFGDYFK AI+ AW+ T EFGLP ++
Sbjct: 65 QKCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKDRAIELAWKLVTEEFGLPKDK 124
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDR- 224
L +VY DDDEAF +W K G+P I R+ DNFW G TGPCGPCSEI+YD H D+
Sbjct: 125 LIATVYIDDDEAFGLWKKIAGLPDSRIIRIAGADNFWQMGDTGPCGPCSEIFYD-HGDKI 183
Query: 225 -----GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQK 279
G D D GD RF+E +NLVFMQY K DGS L + +IDTG GLER+A +LQ
Sbjct: 184 PGGPPGSPDED-GD--RFVEIWNLVFMQYEKLPDGSRLNLPKPSIDTGAGLERVAAVLQG 240
Query: 280 VPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIG 339
+NY+ DL +I+ A++L A + +L++I DHLRA +L++DGV PSN G
Sbjct: 241 KHDNYDIDLFVALIRAAADLTG---ADPHGPMKASLRVIADHLRATSFLIADGVLPSNEG 297
Query: 340 RGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRIL 399
RGYV+RR++RRA+R +LLG K L G + + E EL R + ++
Sbjct: 298 RGYVLRRIMRRAMRHAQLLGAKEPLMWRLVGVLVREMGEAFPELQ---------RARPLI 348
Query: 400 EE-LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEI 458
EE L+ EE RF +TLERG +LD+ S + + G + G+ AF LYDT+GFP+++
Sbjct: 349 EETLRLEETRFRKTLERGLSILDEK-----SASLKKGDM--FDGETAFTLYDTYGFPLDL 401
Query: 459 TKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSA--DLAEKIPDTEFLGYD 516
T++ G+ VD+ F ME Q+ +++A+ + + ++ L EK+ TEFLGY+
Sbjct: 402 TQDALRARGIGVDIASFTDAMEQQKAKARASWSGSGEAATETIWFPLREKLGATEFLGYE 461
Query: 517 TLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQT 576
T A+ V +L+ +GK + G ++LN+TPFY ESGGQ+GD G L
Sbjct: 462 TEIAEGAVAALVKDGKEADSLKAGESGAIVLNQTPFYGESGGQVGDTGIL------TGDG 515
Query: 577 AVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALK 636
V V D +K G +FVH GT+ +G L G + VD R + +H+ATHLL AL+
Sbjct: 516 VRVRVTDTQKKAGDLFVHLGTVEQGTLTPGMALALEVDRARRGAIRANHSATHLLHEALR 575
Query: 637 KVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDD 696
+V+G +Q GSLVA +RLRFDF ++P+ EL IE + N + + + T++MA+DD
Sbjct: 576 QVLGDHIAQRGSLVAPERLRFDFVHNKPISADELRRIEDIANDVVLENGEVTTRLMAVDD 635
Query: 697 AKRAGAIAMFGEKYGEQVKISS 718
A+ AGA A+FGEKYG++V++ S
Sbjct: 636 AREAGARALFGEKYGDEVRVVS 657
>gi|237809468|ref|YP_002893908.1| alanyl-tRNA synthetase [Tolumonas auensis DSM 9187]
gi|237501729|gb|ACQ94322.1| alanyl-tRNA synthetase [Tolumonas auensis DSM 9187]
Length = 874
Score = 550 bits (1416), Expect = e-153, Method: Compositional matrix adjust.
Identities = 302/680 (44%), Positives = 421/680 (61%), Gaps = 49/680 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR FL+++ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 8 IRTAFLEYFRSQGHQVVDSSSLVPHNDPTLLFTNAGMNQFKDVFLGGDIRPYSRATTAQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
C+R ND++NVG T+RHHTFFEMLGNFSFGDYFK +AI++AW+F T LP +L
Sbjct: 68 CVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKHDAIRFAWDFLTKVLQLPQEKLL 127
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYYDF 220
++VY DDEA+ IW E+GV + I R+G A DNFW G TGPCGPC+EI+YD
Sbjct: 128 VTVYATDDEAYGIWANEIGVSADRIVRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFYDH 187
Query: 221 HPD--RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQ 278
D G D RFIE +N+VFMQ+N++ DG+LEPL + ++DTG+G+ER++ I+Q
Sbjct: 188 GADIWGGPPGSPEEDGDRFIEIWNVVFMQFNRQADGTLEPLPKPSVDTGMGIERVSAIMQ 247
Query: 279 KVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNI 338
V +NYE D+ +I+ A+++ V+ D N +L++I DH+R+ +L+SDGV PSN
Sbjct: 248 GVHSNYEIDIFKTLIQNAAKIVGVT-----DLENKSLRVIADHIRSCSFLISDGVMPSNE 302
Query: 339 GRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRI 398
GRGYV+RR+IRRAVR GR LG L GA + + E EL + +Q +
Sbjct: 303 GRGYVLRRIIRRAVRHGRKLGATDTFFYQLVGALVALMGEAYPELKS---------QQPV 353
Query: 399 LEE-LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVE 457
+E LK EE +FV+TL+RG LL++ L G V + G F LYDT+GFP +
Sbjct: 354 VERVLKLEEEQFVRTLDRGLSLLEEELV-------RLGDVREIPGSVVFKLYDTYGFPAD 406
Query: 458 ITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDT-EFLGYD 516
+T +V + G ++D F EME QR + A +A +VD + L KI T +F GY+
Sbjct: 407 LTADVVRDRGYTIDEAAFQQEMEKQRER---AKDASHFAVDYNKQL--KIEQTSDFCGYE 461
Query: 517 TLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQT 576
A + ++ + + V + G ++L TPFYAESGGQ+GD G L V
Sbjct: 462 RTIANTTITAIYLADQLVSTLKDGDQALIVLENTPFYAESGGQMGDAGLLRVGD------ 515
Query: 577 AVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALK 636
A+ V D K +G VHKG + +G + G VEAIVD R +HH+ATHLL AAL+
Sbjct: 516 ALFAVTDTHK-IGQAIVHKGFVEQGSFKTGDTVEAIVDNTRRNATALHHSATHLLHAALR 574
Query: 637 KVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDD 696
+G+ +Q GS V DRLRFDF+ + L +IE+ +N I L+ T++M+LDD
Sbjct: 575 NALGEHVAQKGSQVGPDRLRFDFSHFEAINPAALRQIEQSVNAEIRKNVLIDTQLMSLDD 634
Query: 697 AKRAGAIAMFGEKYGEQVKI 716
AK +GA+A+FGEKYG++V++
Sbjct: 635 AKTSGAMALFGEKYGDEVRV 654
>gi|410419749|ref|YP_006900198.1| alanyl-tRNA synthetase [Bordetella bronchiseptica MO149]
gi|427821320|ref|ZP_18988383.1| alanyl-tRNA synthetase [Bordetella bronchiseptica D445]
gi|427821851|ref|ZP_18988913.1| alanyl-tRNA synthetase [Bordetella bronchiseptica Bbr77]
gi|408447044|emb|CCJ58716.1| alanyl-tRNA synthetase [Bordetella bronchiseptica MO149]
gi|410572320|emb|CCN20595.1| alanyl-tRNA synthetase [Bordetella bronchiseptica D445]
gi|410587116|emb|CCN02146.1| alanyl-tRNA synthetase [Bordetella bronchiseptica Bbr77]
Length = 874
Score = 550 bits (1416), Expect = e-153, Method: Compositional matrix adjust.
Identities = 306/679 (45%), Positives = 413/679 (60%), Gaps = 46/679 (6%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR++FL F+ S+GH ++PS+SLVP DPT+L T +GM+QFK +F GK R RA +SQR
Sbjct: 6 IRQKFLQFFQSKGHTIVPSSSLVPANDPTLLFTNSGMVQFKDVFTGKEARAYKRATSSQR 65
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK+EAIQ+AWE T + LPA +LW
Sbjct: 66 SVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKREAIQYAWELLTQVYKLPAEKLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYYDF 220
++VY++DDEA++IW KEVGVP E I R+G A DNFW TGPCGPCSEI+YD
Sbjct: 126 VTVYQEDDEAYDIWAKEVGVPAERIIRIGDNKGARYASDNFWQMADTGPCGPCSEIFYDH 185
Query: 221 HPD--RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQ 278
P+ G D R+IE +NLVFMQ+ + G++E L + +DTG+GLERIA +LQ
Sbjct: 186 GPEIWGGPPGSPEEDGDRYIEIWNLVFMQFERDAAGNMERLPKPCVDTGMGLERIAAVLQ 245
Query: 279 KVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNI 338
V +NYE DL +I A+ V D + +LK+I DH+RA +L+ DG+ PSN
Sbjct: 246 HVHSNYEIDLFQKLIAAAARETGV-----KDLADNSLKVIADHIRACAFLIVDGIIPSNE 300
Query: 339 GRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRI 398
GRGYV+RR++RRA+R G LG L + + E EL+ +R+
Sbjct: 301 GRGYVLRRIVRRALRHGYKLGQTKPFFHRLVPDLVAEMGEAYPELAQ--------VAERV 352
Query: 399 LEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEI 458
+ L++EE RF +TLE G K+LD LA + + P L G F LYDT+GFPV++
Sbjct: 353 AQVLRQEEERFGETLEHGMKILDGALA------KVAKGDP-LDGTTLFTLYDTYGFPVDL 405
Query: 459 TKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTL 518
T ++ E V VDM GF+ M+ QR Q++AA K++ S + AE T F GY+ L
Sbjct: 406 TADICREREVEVDMAGFEAAMQRQREQARAA-GKFKMAEGLSYEGAE----TRFEGYENL 460
Query: 519 SAKAI-VESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTA 577
+ V +L V G V +VS G D V+L+ TPFYAESGGQ+GD G L
Sbjct: 461 ELSGVKVTALYVEGTQVEQVSAGQDAVVVLDATPFYAESGGQVGDTGLL------EAGGV 514
Query: 578 VVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKK 637
V D K VF H GT+ G L+VG + A VD R R +H+ATHL+ AL++
Sbjct: 515 RFAVADTLKIQPGVFGHHGTLEAGALKVGDTLLARVDAVRRARTVRNHSATHLMHKALRE 574
Query: 638 VIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDA 697
V+G Q GSLV D+ RFDF P+ ++ +E ++N + + KVMA DDA
Sbjct: 575 VLGAHVQQRGSLVDPDKTRFDFAHDAPMTAEQIARVEAIVNAEVLANQATEAKVMAYDDA 634
Query: 698 KRAGAIAMFGEKYGEQVKI 716
+ GA+A+FGEKYG+ V++
Sbjct: 635 VKGGAMALFGEKYGDTVRV 653
>gi|95928611|ref|ZP_01311358.1| alanyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
gi|95135401|gb|EAT17053.1| alanyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
Length = 880
Score = 550 bits (1416), Expect = e-153, Method: Compositional matrix adjust.
Identities = 301/681 (44%), Positives = 413/681 (60%), Gaps = 36/681 (5%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
+ + IR RF+ ++ GH+ +PS+SL+P DPT+L T AGM QFK +FLG R RA
Sbjct: 3 TANEIRARFIQYFEKHGHRAVPSSSLIPHNDPTLLFTNAGMNQFKDLFLGAETRDYKRAT 62
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
++Q+C+R ND+ENVGRT+RHHTFFEMLGNFSFGDYFK++AI++ WEF T E LP
Sbjct: 63 SAQKCVRAGGKHNDLENVGRTARHHTFFEMLGNFSFGDYFKQDAIRFGWEFLTKEMKLPV 122
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPD 223
LW+SV+EDDDEAF IW E+GV E I R+G DNFW G TGPCGPCSEI+ D +
Sbjct: 123 EDLWVSVFEDDDEAFNIWRDEIGVREERILRLGEKDNFWAMGDTGPCGPCSEIHIDQGEE 182
Query: 224 RGCS-DVDLG--DDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKV 280
C D LG D RF+E +NLVFMQY + DG+L PL + +IDTG+GLERI ++Q V
Sbjct: 183 MTCGPDCALGVCDCDRFLELWNLVFMQYERSADGTLSPLPKPSIDTGMGLERITAVVQGV 242
Query: 281 PNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGR 340
+NY+TD + II +LA +Y + D ++++++I DH RA +L++DGV PSN GR
Sbjct: 243 KSNYDTDSLRAIIAHIEQLAGKTYGDNED-ADVSMRVIADHSRATAFLIADGVLPSNEGR 301
Query: 341 GYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILE 400
GYV+RR++RRA R ++LG + S+ + EL +D K
Sbjct: 302 GYVLRRIMRRAARHAKMLGFDEPVLFKTATFVMESMKDAYPELEERLDYVAKV------- 354
Query: 401 ELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITK 460
+K EE RF+QTL G ++L++ + D L +++ +P G F LYDTFGFPV++T
Sbjct: 355 -VKNEEERFIQTLGNGLRILNEEI-DTL-KSKGQTVIP---GDTVFRLYDTFGFPVDLTA 408
Query: 461 EVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDS-----ADLAEKIPDTEFLGY 515
++ E ++D GF+ ME QR Q A K S ++ LAE+ EF GY
Sbjct: 409 DIVEGQNFTLDEAGFETCMEQQR---QKARENWKGSGEEGIGAVYKQLAEQGMSCEFTGY 465
Query: 516 DTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
D V +LL +G+ V VS G VE++ + TPFY ESGGQ GD G L +
Sbjct: 466 DKCDDFGTVLALLKDGQQVESVSAGETVEIITSITPFYGESGGQSGDGGTL------TAE 519
Query: 576 TAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAAL 635
+ + K L ++ VH TI EG L VG+ E VD + R ++H+ATH+LQA L
Sbjct: 520 GVKATISETLKPLPNLHVHVATIDEGTLSVGQAAELHVDVEQRTACALNHSATHILQAVL 579
Query: 636 KKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALD 695
+V+G QAGS V DRLRFDF L E++++E +N I + + T VM D
Sbjct: 580 CEVLGDHVKQAGSQVTPDRLRFDFIHFSALTPEEIQQVEEKVNQRIRENAGVMTDVMNTD 639
Query: 696 DAKRAGAIAMFGEKYGEQVKI 716
DA +AGA A+FGEKYG+ V++
Sbjct: 640 DAVKAGATALFGEKYGDSVRV 660
>gi|20807697|ref|NP_622868.1| alanyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
gi|22096187|sp|Q8RAH4.1|SYA_THETN RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|20516247|gb|AAM24472.1| Alanyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
Length = 878
Score = 550 bits (1416), Expect = e-153, Method: Compositional matrix adjust.
Identities = 301/676 (44%), Positives = 438/676 (64%), Gaps = 37/676 (5%)
Query: 51 DSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATS 109
+ IR++FL F+ S+GH LPS SLVP+ D ++LL +GM KP F GK R T
Sbjct: 7 NEIREKFLSFFESKGHLRLPSFSLVPKNDKSLLLINSGMAPLKPYFTGKETPPSRRVTTC 66
Query: 110 QRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWIS 169
QRCIRT D+E VG+T+RH TFFEMLGNFSFGDYFKKEAI WAWEF LP +RLW++
Sbjct: 67 QRCIRTPDIERVGKTARHATFFEMLGNFSFGDYFKKEAIPWAWEFVAEVLKLPVDRLWVT 126
Query: 170 VYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSDV 229
+YE+DDEAFEIWNK VG+P E I RMG +DNFW G TGPCGPCSEIY+D ++GC
Sbjct: 127 IYEEDDEAFEIWNKIVGLPPERIVRMGKEDNFWEIG-TGPCGPCSEIYFDRGEEKGCGKP 185
Query: 230 DLG----DDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYE 285
D G D R++EF+NLVF Q+NK + G+ L NIDTG+GLERIA I+Q V ++
Sbjct: 186 DCGIGCDDCDRYVEFWNLVFTQFNKDEQGNYHRLPNPNIDTGMGLERIAAIMQGVDTIFD 245
Query: 286 TDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVR 345
D+I I S+LA V Y + D+ ++++++I DH+R I +++SDG+ PSN GRGYV+R
Sbjct: 246 VDVIRGIRDFISDLAEVEYGKDADK-DVSIRVITDHIRGITFMISDGILPSNEGRGYVLR 304
Query: 346 RLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKRE 405
RL+RRA R G+LLG L AFL + + +E ++ R+ I + +K E
Sbjct: 305 RLLRRAARHGKLLG--------LNDAFLYKVVDSVVENYGGAYPEIIERKDYIKKIIKLE 356
Query: 406 ELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEE 465
E RF +T+++G +L D ++ + G L G AF LYDT+GFP+++TKE+ +E
Sbjct: 357 EERFKETVDQGLAILQ----DYINELKAQGKTV-LEGAKAFKLYDTYGFPLDLTKEILQE 411
Query: 466 HGVSVDMKGFDIEMENQR---RQSQAAHNAVKLSVDDSADLAEKIPD--TEFLGYDTLSA 520
G+++D +G+ E+E QR R S+ N++ D+ + D T+F+GY+ +
Sbjct: 412 SGITIDEEGYKEELEKQRVRARSSRKEDNSLW-----EQDIYSTLGDISTKFVGYEVYES 466
Query: 521 KAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVE 580
+A V +++ + + V + G DV ++L+ TPFYAESGGQ+GD G + ++ +++
Sbjct: 467 EAKVLAIVKDNEVVEQAEAGDDVSIILDVTPFYAESGGQVGDSGVI------EEEDTLIK 520
Query: 581 VKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIG 640
V D KK +G+ F+H GT+ G++ VG +V A +D R+ A +HTATHLL ALK+V+G
Sbjct: 521 VNDCKK-VGNKFIHIGTVERGLISVGDKVVAKIDVSKRKGAARNHTATHLLHKALKEVLG 579
Query: 641 QETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRA 700
+Q+GSLVA+DRLRFDF+ ++ + EL++IE +N I + + + +DA +
Sbjct: 580 DHVNQSGSLVAYDRLRFDFSHYQAVSKEELKKIEERVNEKIYEQLPVVVEEKNYEDALKE 639
Query: 701 GAIAMFGEKYGEQVKI 716
GA+A+F EKYG++V++
Sbjct: 640 GAVALFTEKYGDKVRV 655
>gi|409201560|ref|ZP_11229763.1| alanyl-tRNA ligase [Pseudoalteromonas flavipulchra JG1]
Length = 871
Score = 550 bits (1416), Expect = e-153, Method: Compositional matrix adjust.
Identities = 304/677 (44%), Positives = 425/677 (62%), Gaps = 48/677 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+A + H+V+PS+SL+P D T+L T AGM+QFK FLG R RA +SQR
Sbjct: 13 IRQSFLDFFAKQQHQVVPSSSLIPGNDATLLFTNAGMVQFKDAFLGAEKRPYTRATSSQR 72
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AI++AW F T LP +L
Sbjct: 73 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKTDAIKFAWGFLTDVIKLPKEKLL 132
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDF--HPDRG 225
++VY +DDEAFEIW+K+VGVP + I R+ DNFW+ G TGPCGPCSEI+YD H G
Sbjct: 133 VTVYHEDDEAFEIWSKQVGVPEDRIIRIATADNFWSMGDTGPCGPCSEIFYDHGEHIWGG 192
Query: 226 CSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYE 285
D RFIE +NLVFMQYN+ DG++EPL +++DTG+GLERI+ I+Q V +NYE
Sbjct: 193 PPGSPEEDGDRFIEIWNLVFMQYNRHADGTMEPLPMQSVDTGMGLERISAIMQGVHSNYE 252
Query: 286 TDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVR 345
DL +IK A+++ + + D + +L+++ DH+R+ +L++DGV PSN GRGYV+R
Sbjct: 253 IDLFQALIKAAAKVTD-----AQDLEDKSLRVVADHIRSCAFLIADGVMPSNEGRGYVLR 307
Query: 346 RLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKR- 404
R+IRRAVR G LG KG L A + E EL ++Q I+E++ R
Sbjct: 308 RIIRRAVRHGNKLGAKGAFFYKLVAALAEQMGEAYPEL---------VKQQAIIEKVLRI 358
Query: 405 EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAE 464
EE +F +TL+RG +L++ LA E +P G F LYDT+GFP ++T +VA
Sbjct: 359 EEDQFGKTLDRGLTILEESLAGI-----EGDVIP---GDLVFKLYDTYGFPADLTADVAR 410
Query: 465 EHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKI---PDTEFLGYDTLSAK 521
E +++D +GF ME QR+++QAA AD E++ +T+F GYD
Sbjct: 411 ERFMTIDERGFQACMEEQRKKAQAAGKF-------GADYNERLKSDKNTDFKGYDAEHYT 463
Query: 522 AIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEV 581
V + +G+ + G V+L+RTPFYAESGGQ+GD G L V G V
Sbjct: 464 GTVVEIFKDGQHTNTLEDGEQGVVILDRTPFYAESGGQVGDTGVLKVANGE------FVV 517
Query: 582 KDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQ 641
D +K LG+ F H G + G + V + +A +D + R+R K +HTATHL+ AL+ ++G
Sbjct: 518 TDTQK-LGNAFAHHGHVV-GRIGVNDKADARIDAERRERVKKNHTATHLVHKALRDLLGD 575
Query: 642 ETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAG 701
+Q GSLV DRLRFDF+ + +L+++E +N I LQT++M +D AK G
Sbjct: 576 HVTQKGSLVLPDRLRFDFSHFEGVTKAQLQQVEDAVNAEIRRNFALQTELMDIDAAKDKG 635
Query: 702 AIAMFGEKYGEQVKISS 718
A+A+FGEKY ++V++ S
Sbjct: 636 AMALFGEKYDDEVRVVS 652
>gi|380510800|ref|ZP_09854207.1| alanyl-tRNA synthetase, partial [Xanthomonas sacchari NCPPB 4393]
Length = 878
Score = 550 bits (1416), Expect = e-153, Method: Compositional matrix adjust.
Identities = 312/683 (45%), Positives = 423/683 (61%), Gaps = 43/683 (6%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S IR FLDF+ +GH ++PSA LVP DPT+L T +GM+QFK +FLG R RAA
Sbjct: 8 STSQIRSDFLDFFKGKGHTIVPSAPLVPGNDPTLLFTNSGMVQFKDVFLGAEKRSYVRAA 67
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
QRC+R ND+++VG T+RHHTFFEMLGN+SFGDYFKK+AI WAWE T + LPA
Sbjct: 68 DVQRCLRAGGKHNDLDSVGYTARHHTFFEMLGNWSFGDYFKKDAIAWAWELLTQVWKLPA 127
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEI 216
RL ++VY DDEA+ +W +GVP E I R+G A DNFW TGPCGPC+EI
Sbjct: 128 ERLLVTVYHTDDEAYALWRDMIGVPAERIVRIGDNKGAPYASDNFWQMADTGPCGPCTEI 187
Query: 217 YYDF--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIA 274
+YD H G D RFIE +NLVFMQ++++ DG+L PL +DTG+GLER+A
Sbjct: 188 FYDHGAHIAGGPPGSPDEDGDRFIEIWNLVFMQFDRQPDGTLVPLPAPCVDTGMGLERLA 247
Query: 275 RILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVF 334
ILQ V NYE DL +I+KASEL + D N +L++I DH+RA +L+ DGV
Sbjct: 248 AILQHVHTNYEIDLFQTLIRKASELTGTA-----DLENKSLRVIADHIRACAFLIVDGVL 302
Query: 335 PSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAR 394
PSN GRGYV+RR+IRRA+R G +LG++ F + +EL ++ A
Sbjct: 303 PSNEGRGYVLRRIIRRALRHGWMLGVR--------QPFFSKLMPTLVELMGVAYPELTAA 354
Query: 395 EQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGF 454
+ +L L+ EE RF +TL+ G K+ + + A A G V ++G+DAF LYDT+GF
Sbjct: 355 QDTVLRALQAEEERFAETLDAGMKIFEDVAAKA------QGGV--IAGEDAFRLYDTYGF 406
Query: 455 PVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLG 514
P+++T+++A E + VD +GF+ M+ QRR+++ A V ADL + T FLG
Sbjct: 407 PLDLTQDIARERDLRVDEQGFETAMDEQRRRAREA-GKFGGGVQLPADLVATLAPTVFLG 465
Query: 515 YDTLSAKAI-VESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTN 573
YD+L A + V +LL +G+PV G V VL ++TPFYAESGGQ+GD G L GT
Sbjct: 466 YDSLQADGLRVVALLKDGRPVQSAQAGDAVIVLTDKTPFYAESGGQVGDLGTL-TAAGTR 524
Query: 574 QQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQA 633
+ V D +K G H GT+ EG L+VG + VD + R ++H+ATHLL A
Sbjct: 525 -----LTVTDTQKFAGQFHGHVGTLEEGSLKVGDLLAGQVDAERRGATILNHSATHLLHA 579
Query: 634 ALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMA 693
AL++V+G Q GSLVA DRLRFDF+ +P+ EL IER +N + N + M
Sbjct: 580 ALREVLGTHVQQKGSLVAPDRLRFDFSHFQPIAAEELALIERKVNQQVRANNAAEVHQMG 639
Query: 694 LDDAKRAGAIAMFGEKYGEQVKI 716
+ +A GA+A+FGEKYGE+V++
Sbjct: 640 MQEALDFGAMALFGEKYGERVRV 662
>gi|416904864|ref|ZP_11930747.1| alanyl-tRNA synthetase [Burkholderia sp. TJI49]
gi|325529341|gb|EGD06275.1| alanyl-tRNA synthetase [Burkholderia sp. TJI49]
Length = 874
Score = 550 bits (1416), Expect = e-153, Method: Compositional matrix adjust.
Identities = 298/679 (43%), Positives = 422/679 (62%), Gaps = 44/679 (6%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR++FL F+ S+GH ++ S+SLVP DPT++ T +GM+QFK +FLG R RA T+QR
Sbjct: 6 IREKFLKFFESKGHTIVRSSSLVPGNDPTLMFTNSGMVQFKDVFLGTDQRPYSRATTAQR 65
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AI++AWE T + LP +LW
Sbjct: 66 SVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIKFAWELLTTVYQLPKEKLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYYDF 220
++VY++DDEA++IW K+VGVP E I R+G A DNFW G TGPCGPC+EI+YD
Sbjct: 126 VTVYQEDDEAYDIWAKDVGVPTERIIRIGDNKGARYASDNFWTMGDTGPCGPCTEIFYDH 185
Query: 221 HPD--RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQ 278
P+ G D R+IE +NLVFMQ+N+ G++ L ++++DTG+GLER+A +LQ
Sbjct: 186 GPEVWGGPPGSPEEDGDRYIEIWNLVFMQFNRDAQGNMTRLPKQSVDTGMGLERLAAVLQ 245
Query: 279 KVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNI 338
V +NYE DL +IK A+ + +++D N +LK+I DH+RA +L+ DGV P N
Sbjct: 246 HVHSNYEIDLFQNLIKAAARV-----TETSDLNNNSLKVIADHIRACSFLIVDGVIPGNE 300
Query: 339 GRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRI 398
GRGYV+RR++RRA+R G LG K GAF + + ++K EQR+
Sbjct: 301 GRGYVLRRIVRRAIRHGYKLGRK--------GAFFHQLVADLVAEMGVAYPELKEAEQRV 352
Query: 399 LEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEI 458
+ L++EE RF +T+E G +L+ LAD ++ G V L G+ AF L+DT+GFP+++
Sbjct: 353 TDVLRQEEERFFETIEHGMSILEAALADVEAK---GGKV--LDGELAFKLHDTYGFPLDL 407
Query: 459 TKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTL 518
T +V E G++VD FD M QR Q++AA + L T F GY+ +
Sbjct: 408 TADVCRERGMTVDEPAFDDAMARQREQARAAGK-----FKATQGLEYTGAKTTFHGYEEI 462
Query: 519 S-AKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTA 577
+ A V +L V+G V +V G D V+L+ TPFYAESGGQ+GD G L N T
Sbjct: 463 AFDDAKVVALYVDGSAVNEVKTGQDAVVVLDHTPFYAESGGQVGDQGVL-----ANAATR 517
Query: 578 VVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKK 637
V D K V H GT+ +G L+VG + A +D R R + +H+ATHL+ AL++
Sbjct: 518 FA-VADTLKVQADVIGHHGTLEQGTLKVGDVLRAEIDAHRRARTQRNHSATHLMHKALRE 576
Query: 638 VIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDA 697
V+G Q GSLV D+ RFDF + PL D E+ +E+++N I +VM D+A
Sbjct: 577 VLGAHVQQKGSLVDADKTRFDFAHNAPLSDDEIRRVEQIVNDEILANAPGIVRVMPYDEA 636
Query: 698 KRAGAIAMFGEKYGEQVKI 716
+ GA+A+FGEKYG++V++
Sbjct: 637 VKGGAMALFGEKYGDEVRV 655
>gi|290961838|ref|YP_003493020.1| alanine tRNA synthetase [Streptomyces scabiei 87.22]
gi|260651364|emb|CBG74486.1| alanine tRNA synthetase [Streptomyces scabiei 87.22]
Length = 890
Score = 550 bits (1416), Expect = e-153, Method: Compositional matrix adjust.
Identities = 294/678 (43%), Positives = 424/678 (62%), Gaps = 33/678 (4%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQRC 112
IR+R+L F+ RGH V+PSASL+ +DPT+LL AGM+ FKP FLG+V RA + Q+C
Sbjct: 6 IRRRWLSFFEERGHTVVPSASLIADDPTLLLVNAGMVPFKPYFLGEVKPSFDRATSVQKC 65
Query: 113 IRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE-----FGLPANRLW 167
+RT D+E VG+T+RH TFF+M GNFSFGDYFK+ AIQ AWE T +GL +LW
Sbjct: 66 VRTPDIEEVGKTTRHGTFFQMCGNFSFGDYFKEGAIQHAWELLTSPQDKGGYGLEPEKLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCS 227
I+VY+DDDEA IW++++GVP E I+R+G DN+W+ G GPCGPCSEI YD P+ G
Sbjct: 126 ITVYKDDDEAERIWHEQIGVPKERIQRLGKKDNYWSMGVPGPCGPCSEINYDRGPEFGVE 185
Query: 228 DVDLGDDTRFIEFYNLVFMQYNKKDDGSLE------PLKQKNIDTGLGLERIARILQKVP 281
+D R++E +NLVFMQY + + S E L KNIDTGLGLER+A ILQ V
Sbjct: 186 GGPAVNDERYVEIWNLVFMQYERGEGTSKEDFEILGELPSKNIDTGLGLERLAMILQGVQ 245
Query: 282 NNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRG 341
N YE D +I KA+E+ V Y ++ ++++L+++ DH+R V L+ DGV P N GRG
Sbjct: 246 NLYEIDTSMAVIDKATEITGVRYGDAH-ASDVSLRVVTDHIRTAVMLIGDGVTPGNEGRG 304
Query: 342 YVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEE 401
YV+RR++RRA+R RLLG G +L + + ++ EL T +RI
Sbjct: 305 YVLRRIMRRAIRNMRLLGATGPVVQDLIDVVIGMMGQQYPELVTD--------RKRIETV 356
Query: 402 LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKE 461
EE F++ L+ G +LD A++ T+++G LSG AFLL+DT+GFP+++T E
Sbjct: 357 ALAEEAAFLKALKGGTNILDT----AVTETKQAGG-QVLSGDKAFLLHDTWGFPIDLTLE 411
Query: 462 VAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSA---DLAEKIPDTEFLGYDTL 518
+A E G+SVD GF M+ QR +++A A K D ++A+ +TEF+GY
Sbjct: 412 MAAEQGLSVDEDGFRRLMKEQRDRAKADARAKKTGHADLGAYREIADAAGETEFIGYSDT 471
Query: 519 SAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAV 578
++ V +LV+G ++G +VE++L+RTPFYAE GGQIGD G + V G AV
Sbjct: 472 EGESTVVGILVDGLSSPAATEGDEVEIVLDRTPFYAEGGGQIGDTGRIRVDSG-----AV 526
Query: 579 VEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKV 638
+E++D +K + V+VHKG ++ G + VG + +A +D + R H+ATHL AL+
Sbjct: 527 IEIRDCQKPVPGVYVHKGVVQVGEVTVGAKAQASIDGRRRTAIARAHSATHLTHQALRDA 586
Query: 639 IGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAK 698
+G +QAGS R RFDF + + ++E+ IN + + ++++LD+AK
Sbjct: 587 LGPTAAQAGSENQPGRFRFDFGSPSAVPTAVMTDVEQKINEVLSRDLDVHAEILSLDEAK 646
Query: 699 RAGAIAMFGEKYGEQVKI 716
+ GAIA FGEKYGE+V++
Sbjct: 647 KQGAIAEFGEKYGERVRV 664
>gi|372267651|ref|ZP_09503699.1| alanine--tRNA ligase [Alteromonas sp. S89]
Length = 870
Score = 550 bits (1416), Expect = e-153, Method: Compositional matrix adjust.
Identities = 297/671 (44%), Positives = 424/671 (63%), Gaps = 40/671 (5%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FL+++A +GH +PS+SLVP DPT+L T AGM+QFK FLG+ R RAA+SQR
Sbjct: 6 IREAFLNYFAEQGHTRVPSSSLVPGNDPTLLFTNAGMVQFKDTFLGQESRPYVRAASSQR 65
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK+EAI++AWEF T E LP RLW
Sbjct: 66 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKREAIKFAWEFLTKELKLPEERLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPD--RG 225
++V+ DDEA +IW KE+GV E R+ +DNFW G TGPCGP SEI+YD D G
Sbjct: 126 VTVHISDDEAADIWLKEMGVSAERFSRLD-EDNFWQMGDTGPCGPSSEIFYDHGADVPGG 184
Query: 226 CSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYE 285
+ D R+IE +NLVFMQ+ + DG L PL + ++DTG+GLERIA ++Q V +NYE
Sbjct: 185 PPGSENDDLDRYIEIWNLVFMQFERSADGELHPLPKPSVDTGMGLERIAAVMQGVHSNYE 244
Query: 286 TDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVR 345
DL ++ A ++ S D +L++I DH+R+ +L++DGV PSN GRG+V+R
Sbjct: 245 IDLFQALLNAAGKVVGCS-----DTEEKSLRVIADHIRSCSFLIADGVMPSNEGRGFVLR 299
Query: 346 RLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKRE 405
R+IRRAVR G LG K L A + + + EL K ++ I L++E
Sbjct: 300 RIIRRAVRHGHKLGHKDIFFYKLVAALVAEMGDAYPEL--------KEKQSVIENALRKE 351
Query: 406 ELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEE 465
E +F +TL++G LLD+ LA + E +P G+ F L+DT+GFP ++T+++A E
Sbjct: 352 EEQFAKTLDKGLALLDEALA-----SLEGTEIP---GELVFTLHDTYGFPTDLTQDIARE 403
Query: 466 HGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTLSAKAIVE 525
G+++DM G++ M QR +++AA + D D E TEFLGYD ++ + V
Sbjct: 404 RGLTLDMAGYEKAMNAQRERARAAGKFKQ----DYTDTVELDGATEFLGYDRVTEQGNVV 459
Query: 526 SLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVK 585
+++ +G+ V ++++G ++L+RTPFYAESGGQ+GD G+L G EV D
Sbjct: 460 AIIKDGELVDRIAEGESAAIVLDRTPFYAESGGQVGDSGYLQSESGR------FEVADCV 513
Query: 586 KSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQ 645
K G+ +H+G + G L V V A V +RQ ++H+ATHLL AAL+KV+G+ +Q
Sbjct: 514 KH-GANHLHQGKLLSGSLAVSEVVTAEVAGDVRQSTALNHSATHLLHAALRKVLGEHVTQ 572
Query: 646 AGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAM 705
GSLV +RLRFDF+ + +L IE L+N I ++T+ ++ AK GA+A+
Sbjct: 573 KGSLVDSERLRFDFSHPEAVTSKQLRAIEALVNSQIRANTAVETEETDIETAKAKGAMAL 632
Query: 706 FGEKYGEQVKI 716
FGEKYG+ V++
Sbjct: 633 FGEKYGDSVRV 643
>gi|302561723|ref|ZP_07314065.1| alanyl-tRNA synthetase [Streptomyces griseoflavus Tu4000]
gi|302479341|gb|EFL42434.1| alanyl-tRNA synthetase [Streptomyces griseoflavus Tu4000]
Length = 890
Score = 550 bits (1416), Expect = e-153, Method: Compositional matrix adjust.
Identities = 297/678 (43%), Positives = 420/678 (61%), Gaps = 33/678 (4%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQRC 112
IR+R+L F+ RGH V+PSASL+ +DPT+LL AGM+ FKP FLG+V RA + Q+C
Sbjct: 6 IRRRWLSFFEERGHTVVPSASLIADDPTLLLVPAGMVPFKPYFLGEVKPPFDRATSVQKC 65
Query: 113 IRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE-----FGLPANRLW 167
+RT D+E VG+T+RH TFF+M GNFSFGDYFK+ AI+ AWE T +GL A RLW
Sbjct: 66 VRTPDIEEVGKTTRHGTFFQMCGNFSFGDYFKEGAIKLAWELLTSSQDKGGYGLDAERLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCS 227
I+VY+DDDEA +IW VGVP E I+R+G DNFW+ G GPCGPCSEI YD P+ G
Sbjct: 126 ITVYQDDDEAEQIWRDVVGVPAERIQRLGKKDNFWSMGVPGPCGPCSEINYDRGPEFGAE 185
Query: 228 DVDLGDDTRFIEFYNLVFMQYNK-----KDDGS-LEPLKQKNIDTGLGLERIARILQKVP 281
+D R++E +NLVFMQY + KDD L L KNIDTGLGLER+A ILQ V
Sbjct: 186 GGPAVNDERYVEIWNLVFMQYERGEGTGKDDFEILGDLPSKNIDTGLGLERLAMILQGVQ 245
Query: 282 NNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRG 341
N YE D +I +A+EL V Y ++ ++++L+++ DH+R V L+ DGV P N GRG
Sbjct: 246 NMYEIDTSMAVIARATELTGVQYGDAH-ASDVSLRVVTDHMRTSVMLIGDGVTPGNEGRG 304
Query: 342 YVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEE 401
YV+RR++RRA+R RLLG G +L + + ++ EL T +RI +
Sbjct: 305 YVLRRIMRRAIRNMRLLGATGPVVKDLIDVVIGMMGQQYPELVTD--------RERIEKV 356
Query: 402 LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKE 461
EE F++TL+ G +LD + D T+ +GS L G AFLL+DT+GFP+++T E
Sbjct: 357 ALAEENAFLKTLKAGTNILDTAITD----TKSAGSAV-LPGDKAFLLHDTWGFPIDLTLE 411
Query: 462 VAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSA---DLAEKIPDTEFLGYDTL 518
+A E G+SVD GF M+ QR +++A + K D ++A++ T+F+GY
Sbjct: 412 MAAEQGLSVDEDGFRRLMKEQREKAKADALSKKTGHADLGAYREIADRAGATDFIGYTAT 471
Query: 519 SAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAV 578
++ V +LV+G ++G +VE++L+RTPFYAE GGQIGD G + G AV
Sbjct: 472 EGESTVVGILVDGVSSPAATEGDEVEIVLDRTPFYAEGGGQIGDTGRIRADNG-----AV 526
Query: 579 VEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKV 638
+E++D +K + V+VHKG ++ G + VG A +D + R H+ATHL AL+
Sbjct: 527 IEIRDCQKPVPGVYVHKGVVQVGEITVGARAHASIDGRRRTAIARAHSATHLTHQALRDA 586
Query: 639 IGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAK 698
+G +QAGS R RFDF + + ++E+ IN + ++ VM +D+A+
Sbjct: 587 LGPTAAQAGSENQPGRFRFDFGSPSAVPTAVMTDVEQKINEVLSRDLDVRADVMGIDEAR 646
Query: 699 RAGAIAMFGEKYGEQVKI 716
+ GAIA FGEKYGE+V++
Sbjct: 647 KQGAIAEFGEKYGERVRV 664
>gi|288574979|ref|ZP_06393336.1| alanyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM 11002]
gi|288570720|gb|EFC92277.1| alanyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM 11002]
Length = 878
Score = 550 bits (1416), Expect = e-153, Method: Compositional matrix adjust.
Identities = 305/675 (45%), Positives = 426/675 (63%), Gaps = 26/675 (3%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
SG IR+ F+DF+ S+G K S SLVPEDPT+L TIAGM+ FK +LG V A T
Sbjct: 5 SGKEIRRLFVDFWVSKGAKHYDSFSLVPEDPTLLFTIAGMVPFKKYYLGIAEPDVDSAVT 64
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
SQ+C+RTND++NVGRT+RHHTFFEMLGNFS+G YFKKE+I W WEF T GL +R++
Sbjct: 65 SQKCVRTNDIDNVGRTARHHTFFEMLGNFSWGGYFKKESITWGWEFLTEVIGLDPDRMYA 124
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCS- 227
++Y+DD+EAF++WNK+VG+P I R G D+NFW G GPCGP SEI YD P C
Sbjct: 125 TIYKDDEEAFDVWNKDVGLPDSRILRFGEDENFWFMGPQGPCGPDSEILYDQGPAFSCGP 184
Query: 228 DVDLGDDT-RFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYET 286
D G + R++E +N VF QY++++DGSL PL +KNIDTG+GLER+ ++Q V N++ET
Sbjct: 185 DCKPGCECDRYLEIWNHVFTQYDRQEDGSLLPLPRKNIDTGMGLERLTSLVQGVSNDFET 244
Query: 287 DLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRR 346
DL PI+ ++A + Y + ++ K+I DH+RA+ ++++DG+ PSN G+GYV+RR
Sbjct: 245 DLFRPIMDHVCDMAGIGYGDGL-QGDMAAKVISDHIRAVSFMIADGILPSNDGQGYVLRR 303
Query: 347 LIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREE 406
L+RRA R GRL+G+K AFL + +++ ++ I + + EE
Sbjct: 304 LLRRAARYGRLIGLK--------KAFLTDLIPNVMDIMADPYRELLDNRLTIEQVVAVEE 355
Query: 407 LRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEH 466
RF +TLE+G LL Q ++ + GS+ L G AF LYDT+G+P+E+T+E+ EE
Sbjct: 356 KRFGRTLEQGSDLLHQEISSVFAG---DGSI--LPGDVAFELYDTYGYPLELTREICEEK 410
Query: 467 GVSVDMKGFDIEMENQR---RQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTLSAKAI 523
G+SVD GF EME QR R S N+V ++ D A+L + T FLGYD+L +A
Sbjct: 411 GLSVDEDGFRREMEVQRERARSSSKQANSV-MTGDLYAELLSEHGPTPFLGYDSLELEAD 469
Query: 524 VESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKD 583
+ L+ GK V S G VE LL+RTPFYAE GGQ+GD GF+ +VEV+D
Sbjct: 470 LTVLMKEGKVVDSASTGDSVEFLLSRTPFYAERGGQVGDQGFV------KGDGFIVEVED 523
Query: 584 VKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQET 643
G + VH+G + G ++ G EV A+VD R+ +HTATHLL +L +V+G
Sbjct: 524 TIHPAGDLIVHRGIVTSGTVKSGCEVRAMVDKDRREAITKNHTATHLLHESLIRVLGGHV 583
Query: 644 SQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAI 703
Q GSLV+ LRFD+ PL EL+E+E ++N I + ++ L AK GA
Sbjct: 584 RQNGSLVSDRFLRFDYTHFEPLSSGELDEVELMVNQEIQNNKTIKVDETDLATAKNLGAK 643
Query: 704 AMFGEKYGEQVKISS 718
A+F EKYG++V++ S
Sbjct: 644 ALFEEKYGDKVRVVS 658
>gi|386823227|ref|ZP_10110382.1| alanyl-tRNA synthetase [Serratia plymuthica PRI-2C]
gi|386380014|gb|EIJ20796.1| alanyl-tRNA synthetase [Serratia plymuthica PRI-2C]
Length = 875
Score = 549 bits (1415), Expect = e-153, Method: Compositional matrix adjust.
Identities = 316/691 (45%), Positives = 436/691 (63%), Gaps = 70/691 (10%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRAYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AI +AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAISYAWELLTGENWFNLPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEAF+IW K++GVP E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYETDDEAFDIWQKQIGVPAERIIRIGDNKGAAFASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR------GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLER 272
D H D G ++ D GD R+IE +N+VFMQ+N++ DG++ PL + ++DTG+GLER
Sbjct: 188 D-HGDHIWGGPPGSAEED-GD--RYIEIWNIVFMQFNRQSDGTMLPLPKPSVDTGMGLER 243
Query: 273 IARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDG 332
IA +LQ V +NYE DL +I +++ D N +L++I DH+R+ +L+SDG
Sbjct: 244 IAAVLQHVNSNYEIDLFSKLITAVAKVTGAV-----DLDNKSLRVIADHIRSCAFLVSDG 298
Query: 333 VFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVK 392
V PS+ GRGYV+RR+IRRA+R G +LG K +F + IE+ ++K
Sbjct: 299 VMPSSEGRGYVLRRIIRRAIRHGNMLGAKE--------SFFYKLVAPLIEVMGPAAEELK 350
Query: 393 AREQRILEE-LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDT 451
R+Q ++E+ LK EE +F +TLERG LLD+ LA T L G+ AF LYDT
Sbjct: 351 -RQQSLVEQVLKTEEDQFARTLERGLALLDEELAKLQGDT--------LDGEAAFRLYDT 401
Query: 452 FGFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQ------AAHNAVKLSVDDSADLAE 505
+GFPV++T +V E G+ VD GF++ ME QRR+++ A +N++ + VDD+
Sbjct: 402 YGFPVDLTADVCRERGLKVDEAGFELAMEAQRRRARESSGFGADYNSM-IRVDDA----- 455
Query: 506 KIPDTEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGF 565
++F GYD +A V +L +G+PV ++ G + V+L+ TPFY ESGGQ+GD G
Sbjct: 456 ----SQFSGYDREEQQATVTALFRDGQPVNEIHAGEEAVVVLDETPFYGESGGQVGDKGV 511
Query: 566 LYVTQGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHH 625
L A V D +K G H+G + +G L+V V+A +D R R +++H
Sbjct: 512 LKAA------GADFVVSDTQK-YGQAIGHQGKLSQGSLKVKDRVDAQIDTARRNRIRLNH 564
Query: 626 TATHLLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDAN 685
+ATHLL AAL++ +G +Q GSLV LRFDF+ + ++ +E L+N I
Sbjct: 565 SATHLLHAALRQTLGDHVAQKGSLVNDKYLRFDFSHFEAMKPEQIRVVEDLVNQQIRRNL 624
Query: 686 LLQTKVMALDDAKRAGAIAMFGEKYGEQVKI 716
+QT VMALDDAK GA+A+FGEKY + V++
Sbjct: 625 PVQTDVMALDDAKEKGAMALFGEKYDDSVRV 655
>gi|78485931|ref|YP_391856.1| alanyl-tRNA synthetase [Thiomicrospira crunogena XCL-2]
gi|123555227|sp|Q31F91.1|SYA_THICR RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|78364217|gb|ABB42182.1| alanyl-tRNA synthetase [Thiomicrospira crunogena XCL-2]
Length = 864
Score = 549 bits (1415), Expect = e-153, Method: Compositional matrix adjust.
Identities = 314/675 (46%), Positives = 435/675 (64%), Gaps = 47/675 (6%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
+RK FLDF+ +GH + S+ +VP DPT+L T AGM+QFK FLG+ R+ RA + QR
Sbjct: 6 LRKAFLDFFVKQGHTAVHSSPVVPGNDPTLLFTNAGMVQFKETFLGQETREYKRATSVQR 65
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
CIR ND+ENVG T+RHHTFFEMLGNFSFGDYFK+EAIQ+AW F T E GLP +LW
Sbjct: 66 CIRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKREAIQYAWTFLTEELGLPEEKLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPD---- 223
I+V+E+D EA +IW KE+GV E R GA DNFW+ G TGPCGPCSEI+YD D
Sbjct: 126 ITVFEEDREAEDIWLKEMGVSAERFSRCGAKDNFWSMGDTGPCGPCSEIFYDHGADVAGG 185
Query: 224 -RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPN 282
G D D GD R+IE +NLVFMQ+++ +DG+L PL + ++DTG+GLER+A ++Q N
Sbjct: 186 PPGSPDED-GD--RYIEIWNLVFMQFDRSEDGTLTPLPKPSVDTGMGLERLAAVMQNQHN 242
Query: 283 NYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGY 342
NY+ DL I+KKASEL D N +L++I DH+R+ +++ DGV PSN GRGY
Sbjct: 243 NYDIDLFQAIVKKASELTG-----EKDLANSSLRVIADHIRSCAFMVVDGVLPSNEGRGY 297
Query: 343 VVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEE- 401
V+RR+IRRA+R G LG L +P++ E+ E + +EQ +E
Sbjct: 298 VLRRIIRRAIRHGYKLGQTDIFFYQL----VPTLVEQMGEAYPEL-----VKEQANVERA 348
Query: 402 LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKE 461
LK EE RF +TLE G K+L++ +A + SGSV +SG AF LYDT+GFP+++T +
Sbjct: 349 LKLEEERFAETLENGMKILEEDIA------QLSGSV--ISGSTAFKLYDTYGFPLDLTAD 400
Query: 462 VAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTLSAK 521
VA E +SVD GF+ EME QR ++++A N S + + T F+GY+ A+
Sbjct: 401 VARERNLSVDEAGFEQEMEAQRARARSASNFGA----QSKNKVDYTGSTHFIGYEQDEAE 456
Query: 522 AIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEV 581
A + ++ V+ V K S+G + V+LN+TPFYAESGGQ+GD G L T+G N V
Sbjct: 457 AEIAAIFVDNVSVEKASEGQEAIVILNQTPFYAESGGQVGDQGSL--TEGMNS----FHV 510
Query: 582 KDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQ 641
+ +K G+ F+H G + G + VG+ + A +D K R+ ++ +H+ATHLL AAL+ V+G
Sbjct: 511 DNCQKQ-GAAFLHIGKVTAGSISVGQTILAHIDVKARRASERNHSATHLLHAALRTVLGT 569
Query: 642 ETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAG 701
Q GSLV +RLRFDF+ P+ +L EIE+L+N I + + M ++ AK G
Sbjct: 570 HVGQKGSLVQPERLRFDFSHFEPISAEQLLEIEQLVNHNIMLNAQVMMEEMDIEAAKAKG 629
Query: 702 AIAMFGEKYGEQVKI 716
A+A+FGEKYG+ V++
Sbjct: 630 AMALFGEKYGDVVRV 644
>gi|258545023|ref|ZP_05705257.1| alanine--tRNA ligase [Cardiobacterium hominis ATCC 15826]
gi|258519721|gb|EEV88580.1| alanine--tRNA ligase [Cardiobacterium hominis ATCC 15826]
Length = 876
Score = 549 bits (1415), Expect = e-153, Method: Compositional matrix adjust.
Identities = 305/688 (44%), Positives = 420/688 (61%), Gaps = 51/688 (7%)
Query: 47 PSSGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPR 105
P S IR+ FLD++A GHK++ S+SLVP DPT+L T AGM+QFK IF G R R
Sbjct: 6 PQSTAEIRRAFLDYFAEHGHKIVHSSSLVPGNDPTLLFTNAGMVQFKDIFTGSESRDYKR 65
Query: 106 AATSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGL 161
A TSQRC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK EAI +AW T FGL
Sbjct: 66 ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKAEAIPFAWNLLTQVFGL 125
Query: 162 PANRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG--------ADDNFWNSGATGPCGPC 213
P +L ++VY +DDEAF IW +VG+P + I R+G DNFW G TGPCGPC
Sbjct: 126 PPEKLCVTVYHEDDEAFAIWRDKVGLPEDKIIRIGDKPGKAKYESDNFWAMGDTGPCGPC 185
Query: 214 SEIYYDFHPD--RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLE 271
SEI+YD PD G D RFIE +N+VFMQ+ + G+++PL + +IDTG+GLE
Sbjct: 186 SEIFYDHGPDVWGGPPGSPEEDGDRFIEIWNIVFMQFERDASGTMKPLPRPSIDTGMGLE 245
Query: 272 RIARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSD 331
RIA +LQ V +NYE D+ +I A+E +D +LK+I DH+RA V+L+ D
Sbjct: 246 RIAAVLQGVHSNYEIDIFRNLIAAAAEATGC-----DDLAQTSLKVIADHIRATVFLMVD 300
Query: 332 GVFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDV 391
GV P N GRGYV+RR++RRA+R G LG + F +A E+ V
Sbjct: 301 GVLPGNEGRGYVLRRIMRRAIRHGYKLGQN-------QPFFYKLVAPLVAEMGEAYPEIV 353
Query: 392 KAREQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDT 451
+A E RI + ++REE RF QTLE G ++L++ AL R + + G+ F LYDT
Sbjct: 354 EA-EARITDAVRREEERFAQTLEAGLEVLEK----ALGEMRGT----EIPGETVFKLYDT 404
Query: 452 FGFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTE 511
+GFPV++T ++A E G+++DM G+D M QR +++AA K D++ K T
Sbjct: 405 YGFPVDLTADIARERGLTLDMDGYDAAMAEQRERAKAAG---KFDAAQKLDISGK---TA 458
Query: 512 FLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQG 571
F GY+ S A + + +GK V K+ G+ V+L+RTPFY ESGGQ+GD G L T G
Sbjct: 459 FDGYEKESGSAQIMQIFADGKAVTKLDAGARGVVVLDRTPFYGESGGQVGDSGTLRTTSG 518
Query: 572 TNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLL 631
V V+D +K G F+H G + +G + VG +A +D + R K HH+ATHLL
Sbjct: 519 ------VFRVEDTQKQ-GDAFLHIGHVEQGDISVGETAQAEIDRERRAAIKRHHSATHLL 571
Query: 632 QAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWI-GDANLLQTK 690
AL+ +G Q GSLV R RFDF+ + L ++ ++E ++N I G+A ++ +
Sbjct: 572 HKALRSTLGTHVQQKGSLVDERRTRFDFSHDKALSAADIAQVEAMMNAQILGNAPVV-IE 630
Query: 691 VMALDDAKRAGAIAMFGEKYGEQVKISS 718
M+ D A++ GA+A+FGEKYG+ V++ S
Sbjct: 631 QMSRDAAQKKGAMALFGEKYGDVVRVVS 658
>gi|377577347|ref|ZP_09806330.1| alanyl-tRNA synthetase [Escherichia hermannii NBRC 105704]
gi|377541875|dbj|GAB51495.1| alanyl-tRNA synthetase [Escherichia hermannii NBRC 105704]
Length = 876
Score = 549 bits (1415), Expect = e-153, Method: Compositional matrix adjust.
Identities = 314/689 (45%), Positives = 432/689 (62%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTAQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQYAWELLTGEQWFNLPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVGVP E I R+G A DNFW G TGPCGPC+EI++
Sbjct: 128 LWVTVYESDDEAYEIWEKEVGVPRERIIRIGDNKGAAFASDNFWQMGDTGPCGPCTEIFF 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NYE DL +I+ ++ + D +N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYEIDLFRDLIQAVAKETGAT-----DLSNKSLRVIADHIRSCAFLIADGVIP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRA+R G +LG K F + I + D+K ++
Sbjct: 302 SNENRGYVLRRIIRRAIRHGNMLGAKD--------TFFYKLVGPLISVMGSAGEDLKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLTGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQ------AAHNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + V+ +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRARESSGFGADYNAM-IRVEGA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD + V +L V+GK V ++S G V+LN TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDHVELTGKVTALFVDGKAVDQISVGEQAVVILNETPFYAESGGQVGDRGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
QG V + + +++G H G + GVL+VG V A VD R R +++H+ATH
Sbjct: 513 QGNGFAFTVEDTQKYGQAIG----HIGKLTRGVLKVGEGVNAQVDEARRARIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G +Q GSLV LRFDF+ + E+ +E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVAQKGSLVNDKGLRFDFSHFEAMKPEEIRAVEDLVNAQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+VM L+ AK GA+A+FGEKY ++V++ S
Sbjct: 629 QVMDLEAAKAKGAMALFGEKYDDRVRVLS 657
>gi|336246806|ref|YP_004590516.1| alanyl-tRNA synthetase [Enterobacter aerogenes KCTC 2190]
gi|334732862|gb|AEG95237.1| alanyl-tRNA synthetase [Enterobacter aerogenes KCTC 2190]
Length = 875
Score = 549 bits (1415), Expect = e-153, Method: Compositional matrix adjust.
Identities = 308/687 (44%), Positives = 434/687 (63%), Gaps = 62/687 (9%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTAQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI++AWE T E F LP +
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAIKYAWELLTGENWFALPKEK 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEAF+IW EVGVP E I R+G A DNFW G TGPCGPC+EI++
Sbjct: 128 LWVTVYETDDEAFDIWANEVGVPRERIIRIGDNKGAPFASDNFWQMGDTGPCGPCTEIFF 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +I +++ + D TN +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRNLIASVAKVTGAT-----DLTNKSLRVIADHIRSCAFLIADGVIP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRA+R G +LG K F + I++ ++K ++
Sbjct: 302 SNENRGYVLRRIIRRAIRHGNMLGAKD--------TFFWKLVAPLIDVMGAAGEELKQQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
+ + LK EE +F +TLERG LLD+ L+ T L G+ AF LYDT+GFP
Sbjct: 354 ALVEQVLKTEEEQFARTLERGLALLDEELSKLKGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQ------AAHNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRARESSGFGADYNAM-IRVDGA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD L V +L ++GK V VS G D V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDHLELNGKVTALFIDGKAVDSVSAGQDAVVVLDQTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G AV + + +++G H G + G L+VG V+A VD RQR +++H+ATH
Sbjct: 513 KGAGFSFAVSDTQKYGQAIG----HIGKVASGSLKVGDAVQADVDQARRQRIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G +Q GSLV LRFDF+ + E+ +E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVAQKGSLVNDKALRFDFSHFEAMKPEEIRAVEDLVNAQIRRNLAIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKI 716
+M +D A+ +GA+A+FGEKY ++V++
Sbjct: 629 NIMDIDAARESGAMALFGEKYDDRVRV 655
>gi|410628039|ref|ZP_11338770.1| alanyl-tRNA synthetase [Glaciecola mesophila KMM 241]
gi|410152478|dbj|GAC25539.1| alanyl-tRNA synthetase [Glaciecola mesophila KMM 241]
Length = 865
Score = 549 bits (1415), Expect = e-153, Method: Compositional matrix adjust.
Identities = 305/675 (45%), Positives = 424/675 (62%), Gaps = 44/675 (6%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FL+F+A +GH+ + S+SLVP +DPT+L T AGM QFK +FLG R+ RA +SQR
Sbjct: 8 IRQAFLNFFADKGHQKVSSSSLVPSDDPTLLFTNAGMNQFKDVFLGTEQRKYTRATSSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AI +AW F T E LP +L
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHQAIGYAWSFLTEELKLPKEKLL 127
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDF--HPDRG 225
++VY +DDEAF+IW+ ++G+P E I R+ DNFW+ G TGPCGPCSEI+YD H G
Sbjct: 128 VTVYSEDDEAFDIWHNDIGIPKEKIIRIATSDNFWSMGDTGPCGPCSEIFYDHGEHIWGG 187
Query: 226 CSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYE 285
D RFIE +NLVFMQ+N++ +G + PL + +IDTG+GLERI+ I+Q V +NYE
Sbjct: 188 PPGSPEEDGDRFIEIWNLVFMQFNRQANGDMLPLPKPSIDTGMGLERISAIIQNVHSNYE 247
Query: 286 TDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVR 345
D+ +IK +++ V+ + +L+++ DH+R+ +L+SDGV PSN GRGYV+R
Sbjct: 248 IDIFQNLIKATAKIVGVTSLEDK-----SLRVVADHIRSCSFLISDGVMPSNEGRGYVLR 302
Query: 346 RLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEE--LK 403
R+IRRAVR G LG G L A + E EL+ EQR + E L+
Sbjct: 303 RIIRRAVRHGNKLGATGVFFYKLVAALATEMGEAYPELN----------EQRAVIEKVLR 352
Query: 404 REELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVA 463
EE +F +TLERG +L+ DAL+ E VP G F LYDT+GFP ++T +VA
Sbjct: 353 VEEEQFSRTLERGMLILN----DALNEL-EGKVVP---GDVVFKLYDTYGFPADLTNDVA 404
Query: 464 EEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTLSAKAI 523
E G+S+D +GF+ M QR+++Q A N VD + L + ++ F+GY+ A
Sbjct: 405 REKGLSIDEQGFEQAMAEQRKRAQKASN---FDVDYNEQLRSDL-ESIFVGYEHEDNTAT 460
Query: 524 VESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKD 583
V L G+ V +++ G++ V+L+ +PFYAE+GGQ GD G L +G VKD
Sbjct: 461 VTELFFQGQSVSELAAGAEGTVILDESPFYAEAGGQAGDTGTLVTDEGG------FSVKD 514
Query: 584 VKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQET 643
K LG HKG L VG V A VD R K++H+ATHL+ AALK ++G+
Sbjct: 515 TVK-LGKAIAHKGAALSK-LSVGDSVLAKVDGVRRHAIKLNHSATHLMHAALKSILGEHV 572
Query: 644 SQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAI 703
+Q GSLV DRLRFDF+ + ++ +E ++N I + LQTK+M L+ AK AGA+
Sbjct: 573 NQKGSLVQADRLRFDFSHFEAMSKEQVLAVETMVNEQILANHPLQTKLMGLEQAKEAGAM 632
Query: 704 AMFGEKYGEQVKISS 718
A+FGEKY ++V++ S
Sbjct: 633 ALFGEKYDDEVRVVS 647
>gi|54294686|ref|YP_127101.1| alanyl-tRNA synthetase [Legionella pneumophila str. Lens]
gi|59798486|sp|Q5WVQ2.1|SYA_LEGPL RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|53754518|emb|CAH16002.1| alanyl-tRNA synthetase [Legionella pneumophila str. Lens]
Length = 860
Score = 549 bits (1415), Expect = e-153, Method: Compositional matrix adjust.
Identities = 304/676 (44%), Positives = 432/676 (63%), Gaps = 45/676 (6%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FL+++ RGH+++ S+SL+P DPT+L T AGM+QFK +FLG R RA T+QR
Sbjct: 6 IRQAFLNYFVQRGHQLVASSSLIPSNDPTLLFTNAGMVQFKDLFLGLETRPYQRAVTAQR 65
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK+EAIQ+AWEF T +PA RLW
Sbjct: 66 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKREAIQYAWEFLTEVLHIPAERLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPD---- 223
++VY++D EA IW KE+ V E R G DNFW+ G TGPCGPC+EI+YD P+
Sbjct: 126 VTVYKEDLEAEGIWLKEMKVSPERFSRCGEKDNFWSMGDTGPCGPCTEIFYDHGPEVAGG 185
Query: 224 -RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPN 282
G D D GD R+IE +NLVFMQ+N+ +G L PL + ++DTG+GLER+A ++Q V +
Sbjct: 186 PPGSPDED-GD--RYIEIWNLVFMQFNRDREGCLHPLPKPSVDTGMGLERLAAVIQGVHS 242
Query: 283 NYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGY 342
NYE D +IK ++L Q D + +LK+I DH+R+ +L+ DGV PSN GRGY
Sbjct: 243 NYEIDSFQYLIKAIAQL-----GQDIDLNHTSLKVIADHIRSCSFLIVDGVLPSNEGRGY 297
Query: 343 VVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEEL 402
V+RR+IRRAVR G LG+ L + + + EL I+S KA +RIL++
Sbjct: 298 VLRRIIRRAVRHGNKLGLPSPFFFKLVQPLIDVMGDAYPEL---INS--KAHIERILQQ- 351
Query: 403 KREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEV 462
EE +F +TLE+G +LL + + + LSG+ AF LYDT+GFP+++T ++
Sbjct: 352 --EENQFTRTLEQGLRLLQDHIKNLKGQ--------ELSGEVAFKLYDTYGFPIDLTADI 401
Query: 463 AEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTLSAKA 522
E G+ +DM+ F+ M+ QR QSQAA + + D A +++ +EF GY+ S +A
Sbjct: 402 IREQGLHIDMEAFNQLMQQQREQSQAAS---QFTTDYHA-VSQLDHQSEFHGYEKESMEA 457
Query: 523 IVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVK 582
+ LL G V ++KG+ V+L+ TPFYAESGGQ+GD G L + + Q V
Sbjct: 458 KIIGLLQEGNEVKSLNKGAKGAVILDHTPFYAESGGQVGDKGLLIGKEFSFQ------VD 511
Query: 583 DVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQE 642
D +K +G VH G + +G L + + A VD R +++HTATHLL AALK+++GQ
Sbjct: 512 DTQK-VGQAVVHYGEVIKGELTLDLSIHAQVDHIRRDAIRLNHTATHLLHAALKQIVGQH 570
Query: 643 TSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGA 702
Q GSLV +R RFDF+ PL ++++IE ++N I N + T+VM ++ AK++GA
Sbjct: 571 VQQRGSLVDAERARFDFSHFEPLTPQQIQQIEEVVNAQIRANNEVITQVMDIESAKQSGA 630
Query: 703 IAMFGEKYGEQVKISS 718
+A+FGEKY + V++ S
Sbjct: 631 VALFGEKYSDAVRVLS 646
>gi|407714237|ref|YP_006834802.1| alanyl-tRNA synthetase [Burkholderia phenoliruptrix BR3459a]
gi|407236421|gb|AFT86620.1| alanyl-tRNA synthetase [Burkholderia phenoliruptrix BR3459a]
Length = 874
Score = 549 bits (1415), Expect = e-153, Method: Compositional matrix adjust.
Identities = 300/679 (44%), Positives = 423/679 (62%), Gaps = 44/679 (6%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR++FL F+ S+GH ++ S+SLVP DPT+L T +GM+QFK +FLG R RA T+QR
Sbjct: 6 IREKFLKFFESKGHTIVRSSSLVPGNDPTLLFTNSGMVQFKDVFLGAESRPYSRATTAQR 65
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI +AWE T + LP +LW
Sbjct: 66 SVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAIHYAWELLTGVYQLPKEKLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYYDF 220
++VY++DDEA +IW KEVGVPVE I R+G A DNFW TGPCGPCSEI+YD
Sbjct: 126 VTVYQEDDEAHDIWAKEVGVPVERIIRIGDNKGARYASDNFWQMADTGPCGPCSEIFYDH 185
Query: 221 HPD--RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQ 278
P+ G D R+IE +NLVFMQ+N+ G++ PL ++ +DTG+GLERIA +LQ
Sbjct: 186 GPEVWGGPPGSPEEDGDRYIEIWNLVFMQFNRDAQGNMTPLPKQCVDTGMGLERIAAVLQ 245
Query: 279 KVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNI 338
V +NYE DL +IK A+ VS D TN +LK+I DH+RA +L+ DGV P N
Sbjct: 246 HVHSNYEIDLFQALIKAAARETGVS-----DLTNNSLKVIADHIRACSFLIVDGVIPGNE 300
Query: 339 GRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRI 398
GRGYV+RR++RRA+R G LG K G+F + +E ++K +QR+
Sbjct: 301 GRGYVLRRIVRRAIRHGYKLGKK--------GSFFHRMVADLVEQMGSAYPELKDAQQRV 352
Query: 399 LEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEI 458
+ L++EE RF++T+E G +L+ LA+ + ++ L G+ AF L+DT+GFP+++
Sbjct: 353 TDVLRQEEERFLETIEHGMSILENALAELEKKGGKT-----LDGELAFKLHDTYGFPLDL 407
Query: 459 TKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTL 518
T +V E V+VD FD M QR Q++AA K+ + L T F GY+ +
Sbjct: 408 TADVCREREVTVDEAAFDEAMARQREQARAA-GKFKM----AQGLEYSGAKTTFHGYEEI 462
Query: 519 S-AKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTA 577
A V +L V+G V +V++G V+L+ TPFYAESGGQ+GD G L + + A
Sbjct: 463 VFDDAKVVALYVDGASVQEVAQGQQAVVVLDHTPFYAESGGQVGDQGLL---ANASVRFA 519
Query: 578 VVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKK 637
VV D K V H GT+ +G L+VG V+A +D R R +H+ATHL+ AL++
Sbjct: 520 VV---DTLKVQADVVGHHGTLEQGTLKVGDVVKAEIDAVRRARTARNHSATHLMHKALRE 576
Query: 638 VIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDA 697
V+G Q GSLV D+ RFDF + P+ D ++ +E ++N + +VM D+A
Sbjct: 577 VLGSHVQQKGSLVDPDKTRFDFAHNAPMTDEQIRRVEEIVNAEVLANAPGIVRVMPFDEA 636
Query: 698 KRAGAIAMFGEKYGEQVKI 716
+ GA+A+FGEKYG++V++
Sbjct: 637 VKGGAMALFGEKYGDEVRV 655
>gi|84686864|ref|ZP_01014748.1| alanyl-tRNA synthetase [Maritimibacter alkaliphilus HTCC2654]
gi|84665061|gb|EAQ11541.1| alanyl-tRNA synthetase [Rhodobacterales bacterium HTCC2654]
Length = 882
Score = 549 bits (1415), Expect = e-153, Method: Compositional matrix adjust.
Identities = 303/682 (44%), Positives = 428/682 (62%), Gaps = 40/682 (5%)
Query: 48 SSGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRA 106
+S + IR FL ++ GH V+ S+ LVP DPT++ T +GM+QFK +F G R RA
Sbjct: 2 ASLNDIRSTFLSYFEKNGHTVVDSSPLVPRNDPTLMFTNSGMVQFKNLFTGVEHRDYTRA 61
Query: 107 ATSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLP 162
TSQ+C+R ND++NVG T+RHHTFFEMLGNFSFGDYFKKEAI +AWE T EFG+P
Sbjct: 62 TTSQKCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKKEAIPFAWELITREFGIP 121
Query: 163 ANRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHP 222
++L+ +VY DDEAFEIW K+VGVP E I R+ DNFW G TGPCGPC+EI+YD H
Sbjct: 122 KDKLYTTVYHTDDEAFEIW-KKVGVPEERIIRIATSDNFWQMGPTGPCGPCTEIFYD-HG 179
Query: 223 DR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQK 279
D G D RFIE +N+VFMQ + +DGS+ L ++IDTG+GLERI +LQ
Sbjct: 180 DHIWGGPPGSPEEDGDRFIEIWNVVFMQNEQFEDGSMRELDMQSIDTGMGLERIGALLQG 239
Query: 280 VPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIG 339
+NY+TDL +I+ ++ V + N++ ++I DHLR+ +L++DGV PSN G
Sbjct: 240 SHDNYDTDLFKALIEASAHATGVDPYGDH---NVHHRVIADHLRSTSFLMADGVMPSNEG 296
Query: 340 RGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRIL 399
RGYV+RR++RRA+R LLG K L + + + EL + Q ++
Sbjct: 297 RGYVLRRIMRRAMRHAHLLGAKDPVMHRLVPELVRQMGQAYPEL---------GQAQSMI 347
Query: 400 EE-LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEI 458
EE L EE RF TL+RG KLLD+ LA + E ++P G+ AF LYDTFGFP+++
Sbjct: 348 EETLLTEETRFQATLDRGLKLLDEELA----KLPEGAALP---GEAAFKLYDTFGFPLDL 400
Query: 459 TKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSA--DLAEKIPDTEFLGYD 516
T++ E VD +GFD M Q+ +++AA + + D + D+AE+ TEFLGYD
Sbjct: 401 TQDALREKDRLVDTEGFDAAMAEQKAKARAAWSGSGEAADATVWYDIAEEKGTTEFLGYD 460
Query: 517 TLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQT 576
T A+ + +L+ +G KV GS V++++N+TPFYAE+GGQ+GD G + +T
Sbjct: 461 TEKAEGQIVALVADGDKTDKVDTGS-VQIVVNQTPFYAEAGGQVGDTGTI------TTET 513
Query: 577 AVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALK 636
V D KK G VF+H + EG +E G+ E V+ R + +H+ATHLL AL+
Sbjct: 514 GKARVTDTKKVAG-VFIHFAEVVEGSIERGQGAELTVEHDRRSAIRANHSATHLLHEALR 572
Query: 637 KVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDD 696
+ +G +Q GSL A DRLRFDF+ ++ L E+ +ER +N ++ ++T++MA DD
Sbjct: 573 EALGDHVAQRGSLNAPDRLRFDFSHNKALTADEIGRVERDVNAYVRQNTPVETRIMAPDD 632
Query: 697 AKRAGAIAMFGEKYGEQVKISS 718
A+ GA A+FGEKYG++V++ S
Sbjct: 633 ARALGAQALFGEKYGDEVRVVS 654
>gi|262369620|ref|ZP_06062948.1| alanyl-tRNA synthetase [Acinetobacter johnsonii SH046]
gi|262315688|gb|EEY96727.1| alanyl-tRNA synthetase [Acinetobacter johnsonii SH046]
Length = 892
Score = 549 bits (1415), Expect = e-153, Method: Compositional matrix adjust.
Identities = 302/692 (43%), Positives = 439/692 (63%), Gaps = 54/692 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FL ++ S+GH + S+SLVP DPT+L T AGM QFK FLG R RA +SQ+
Sbjct: 6 IREAFLSYFESQGHTRVASSSLVPANDPTLLFTNAGMNQFKDCFLGLEKRDYVRAVSSQK 65
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND++NVG T+RHHTFFEMLGNFSFGDYFK++AI++AW+F T E LP ++
Sbjct: 66 CVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKRDAIKFAWDFLTGEAWLALPKDK 125
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
L+ +VY DDEAF+IWNKE+G+ I R+G A DNFW G TGPCGPCSEI++
Sbjct: 126 LYATVYHTDDEAFDIWNKEIGLDASRIIRIGDNKGGQYASDNFWAMGDTGPCGPCSEIFF 185
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D RFIE +N VFMQ+N+ DG L PL ++DTG+GLERI+
Sbjct: 186 D-HGDHIWGGLPGTPEEDGDRFIEIWNNVFMQFNRTADGVLHPLPAPSVDTGMGLERISA 244
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYA--QSNDRTN-------LNLKIIGDHLRAIV 326
+LQ V +NYE DL ++K A+E+ + A ++ R +LK++ DH R+
Sbjct: 245 VLQHVNSNYEIDLFQHLLKAAAEIIGLDTAALEAEAREKGTPVQYPASLKVVADHARSCS 304
Query: 327 YLLSDGVFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTH 386
+L++DGV PSN GRGYV+RR+IRRAVR G LG G +F + + IE+
Sbjct: 305 FLIADGVNPSNEGRGYVLRRIIRRAVRHGNKLGATG--------SFFHKMLQPLIEVMGQ 356
Query: 387 IDSDVKAREQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAF 446
+++A++ RI +L +EE +F +TLE+G KLL+ LA + GSV + G+ F
Sbjct: 357 AYPELEAQKARIEAQLLKEEEQFAKTLEQGLKLLEGELA------QLKGSV--IPGEVVF 408
Query: 447 LLYDTFGFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEK 506
LYDT+GFP ++T ++A E +++D GF++EM QR Q A +A K ++D ++ + +
Sbjct: 409 KLYDTYGFPTDLTADIARERDLTIDEAGFEVEMAAQR---QRARDAGKFAIDYNS-VVKV 464
Query: 507 IPDTEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFL 566
+T+F GYD + + ++ +G+ V +V +G + ++LN+TPFYAESGGQIGD G
Sbjct: 465 EGETQFDGYDATVGEGQIIAIYKDGEQVDEVVEGDEALIVLNQTPFYAESGGQIGDTGIF 524
Query: 567 YVTQGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHT 626
T + EV+D KKS G FVH+G + G +++ + VEA V +R +H+
Sbjct: 525 ------KNDTGIFEVQDTKKS-GGAFVHQGIVTVGSIKLAQNVEATVKADIRAATARNHS 577
Query: 627 ATHLLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANL 686
ATHLL AAL++++G+ Q GSLVA D LRFDF +P+ +L+EIERL+N + +
Sbjct: 578 ATHLLHAALRQILGEHVQQKGSLVASDILRFDFANDQPVSFEQLQEIERLVNAEVIANSA 637
Query: 687 LQTKVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+ T+++ ++ AK GA+ +FGEKYG++V++ S
Sbjct: 638 VTTELLDIESAKAKGAMMLFGEKYGDEVRVLS 669
>gi|262375452|ref|ZP_06068685.1| alanyl-tRNA synthetase [Acinetobacter lwoffii SH145]
gi|262309706|gb|EEY90836.1| alanyl-tRNA synthetase [Acinetobacter lwoffii SH145]
Length = 892
Score = 549 bits (1415), Expect = e-153, Method: Compositional matrix adjust.
Identities = 303/691 (43%), Positives = 438/691 (63%), Gaps = 52/691 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FL ++ S+GH + S+SLVP DPT+L T AGM QFK FLG R RA +SQ+
Sbjct: 6 IREAFLRYFESQGHTRVASSSLVPANDPTLLFTNAGMNQFKDCFLGLEKRDYVRAVSSQK 65
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND++NVG T+RHHTFFEMLGNFSFGDYFK++AI++AW+F T E GLP ++
Sbjct: 66 CVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKRDAIKFAWDFLTNEEWLGLPKDK 125
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
L+ +VY DDEAF+IWNKE+G+ I R+G A DNFW G TGPCGPCSEI++
Sbjct: 126 LYATVYHTDDEAFDIWNKEIGLDASRIIRIGDNKGGQYASDNFWAMGDTGPCGPCSEIFF 185
Query: 219 DF--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARI 276
D H G D RFIE +N VFMQ+N+ DG L PL ++DTG+GLERI+ +
Sbjct: 186 DHGEHIWGGLPGTPEEDGDRFIEIWNNVFMQFNRTADGVLHPLPAPSVDTGMGLERISAV 245
Query: 277 LQKVPNNYETDLIFPIIKKASELANVSY----AQSNDRTN-----LNLKIIGDHLRAIVY 327
LQ V +NYE DL ++K A+E+ ++ A++ ++ +LK++ DH R+ +
Sbjct: 246 LQHVNSNYEIDLFQHLLKAAAEIIGLNTTALEAEAAEKGTPVQYPASLKVVADHARSCSF 305
Query: 328 LLSDGVFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHI 387
L++DGV PSN GRGYV+RR+IRRAVR G LG G +F + + IE+
Sbjct: 306 LIADGVNPSNEGRGYVLRRIIRRAVRHGNKLGATG--------SFFHKMLKPLIEVMGDA 357
Query: 388 DSDVKAREQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFL 447
++ A++ RI +L +EE +F +TLE+G KLL+ LA + GSV + G+ F
Sbjct: 358 YPELAAQQARIEAQLLKEEEQFAKTLEQGLKLLEGELA------QLKGSV--IPGEVVFK 409
Query: 448 LYDTFGFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKI 507
LYDT+GFP ++T ++A E +++D GF+ EM QR Q A +A K ++D ++ + +
Sbjct: 410 LYDTYGFPTDLTADIARERDLTIDEAGFETEMAAQR---QRARDAGKFAIDYNS-VVKVE 465
Query: 508 PDTEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLY 567
+T+F GYD + + + ++ +G+ V +V +G + ++LN+TPFYAESGGQIGD G
Sbjct: 466 GETQFDGYDATAGEGQIIAIYKDGEQVDEVFEGDEALIVLNQTPFYAESGGQIGDTGIF- 524
Query: 568 VTQGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTA 627
T + EV+D KKS G FVH+G + G L+V + VEA V +R +H+A
Sbjct: 525 -----KNDTGIFEVQDTKKS-GGAFVHQGIVTMGNLKVTQNVEATVKADIRAATARNHSA 578
Query: 628 THLLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLL 687
THLL AAL++++G Q GSLVA D LRFDF +P+ +L+EIERL+N + +
Sbjct: 579 THLLHAALRQILGSHVQQKGSLVASDVLRFDFANDQPVSFEQLQEIERLVNAEVIANTAV 638
Query: 688 QTKVMALDDAKRAGAIAMFGEKYGEQVKISS 718
T+++ ++ AK GA+ +FGEKYG++V++ S
Sbjct: 639 STELLDIESAKAKGAMMLFGEKYGDEVRVLS 669
>gi|422321688|ref|ZP_16402733.1| alanyl-tRNA synthetase [Achromobacter xylosoxidans C54]
gi|317403428|gb|EFV83940.1| alanyl-tRNA synthetase [Achromobacter xylosoxidans C54]
Length = 874
Score = 549 bits (1415), Expect = e-153, Method: Compositional matrix adjust.
Identities = 312/684 (45%), Positives = 416/684 (60%), Gaps = 56/684 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR++FL F+ S+GH ++PS+SLVP DPT+L T +GM+QFK +F GK R RA +SQR
Sbjct: 6 IRQQFLQFFKSKGHTIVPSSSLVPGNDPTLLFTNSGMVQFKDVFTGKESRSYTRATSSQR 65
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AIQ+AWE T + LPA +LW
Sbjct: 66 SVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAIQYAWELLTQVYKLPAEKLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYYDF 220
++VY++DDEA++IW KEVGVP E I R+G A DNFW TGPCGPCSEI+YD
Sbjct: 126 VTVYQEDDEAYDIWAKEVGVPTERIIRIGDNKGARYASDNFWQMADTGPCGPCSEIFYDH 185
Query: 221 HPD--RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQ 278
P+ G D R+IE +NLVFMQ+ + G++ L + +DTG+GLERIA +LQ
Sbjct: 186 GPEIWGGPPGSPEEDGDRYIEIWNLVFMQFERDAAGNMPRLPRPCVDTGMGLERIAAVLQ 245
Query: 279 KVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNI 338
V +NYE DL +I A+ V D N +LK+I DH+RA +L+ DGV PSN
Sbjct: 246 HVHSNYEIDLFQNLIAAAARETGV-----KDLENNSLKVIADHIRACSFLIVDGVIPSNE 300
Query: 339 GRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRI 398
GRGYV+RR++RRA+R G LG L + + E EL+ A +R+
Sbjct: 301 GRGYVLRRIVRRALRHGYKLGQTRPFFHRLVPDLVAEMGEAYPELA--------ATAERV 352
Query: 399 LEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPR---LSGQDAFLLYDTFGFP 455
+ LK+EE RF +TLE G ++LD LA+ VP+ L G F LYDT+GFP
Sbjct: 353 AQVLKQEEERFGETLEHGMRILDGALAN----------VPKGGQLDGTTLFTLYDTYGFP 402
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGY 515
V++T ++ E V VDM GF++ ME QR Q++AA K++ S + AE T F GY
Sbjct: 403 VDLTADICREREVDVDMAGFEVAMERQRDQARAA-GKFKMAEGLSYEGAE----TRFEGY 457
Query: 516 DTLSAKAI-VESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQ 574
+ L + V +L V+G V +V G V+L+ TPFYAESGGQ+GD G L
Sbjct: 458 EKLELDNVKVTALYVDGTQVQQVQAGQSAVVVLDATPFYAESGGQVGDTGLL-------- 509
Query: 575 QTAVVE--VKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQ 632
+ A V V D K VF H GT+ EG L VG V A VD R R +H+ATHL+
Sbjct: 510 EAAGVRFAVGDTLKIQSGVFGHHGTLEEGKLAVGDTVLARVDAVRRARTVRNHSATHLMH 569
Query: 633 AALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVM 692
AL++V+G Q GSLV D+ RFDF PL ++ +E ++N I +VM
Sbjct: 570 KALRQVLGAHVQQRGSLVDPDKTRFDFAQDAPLTAEQIARVEAIVNAEILANQPTVAQVM 629
Query: 693 ALDDAKRAGAIAMFGEKYGEQVKI 716
A DDA + GA+A+FGEKYG+ V++
Sbjct: 630 AYDDAVKGGAMALFGEKYGDTVRV 653
>gi|238921100|ref|YP_002934615.1| alanyl-tRNA synthetase, putative [Edwardsiella ictaluri 93-146]
gi|238870669|gb|ACR70380.1| alanyl-tRNA synthetase, putative [Edwardsiella ictaluri 93-146]
Length = 875
Score = 549 bits (1414), Expect = e-153, Method: Compositional matrix adjust.
Identities = 309/689 (44%), Positives = 427/689 (61%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDFY S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 8 IRQAFLDFYHSKGHQVVDSSSLVPNNDPTLLFTNAGMNQFKDVFLGIDKRSYSRATTAQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AI +AWE T F LP +
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAINFAWELLTGAQWFNLPKEK 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEAF+IW EVGVP E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYESDDEAFDIWANEVGVPRERIIRIGDNKGAPYASDNFWQMGETGPCGPCTEIFY 187
Query: 219 DF--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARI 276
D H G D R+IE +N+VFMQ+N++ DG+L PL + ++DTG+GLERIA +
Sbjct: 188 DHGAHIAGGPPGSPDEDGDRYIEIWNIVFMQFNRQSDGTLLPLPKPSVDTGMGLERIAAV 247
Query: 277 LQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPS 336
LQ V +NY+ DL +I + + + VS D ++ +L++I DH+R+ +L+SDGV PS
Sbjct: 248 LQHVNSNYDIDLFRTLIAETARVIGVS-----DLSSKSLRVIADHIRSCAFLVSDGVLPS 302
Query: 337 NIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQ 396
N GRGYV+RR+IRRAVR G +LG K AF + + I + +D A++Q
Sbjct: 303 NEGRGYVLRRIIRRAVRHGHMLGAKE--------AFFYKLVKPLIAV-MGASADALAQQQ 353
Query: 397 RILEE-LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++E+ LK EE +F +TLERG LLD L+ T L G+ AF LYDT+GFP
Sbjct: 354 AMVEQVLKTEEEQFARTLERGLTLLDDELSTLDGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQ------AAHNAVKLSVDDSADLAEKIPD 509
+++T +V E + VD +GF+ ME QR +++ A +N++ + VD S
Sbjct: 406 LDLTADVCRERSLKVDEEGFERAMEAQRCRARESSGFGADYNSM-IRVDGS--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
T+F GY A+V +L NG+ V + G + V+L +TPFYAESGGQ+GD G L
Sbjct: 456 TDFTGYHLQQQDALVTALFHNGEAVDVLQAGEEGVVVLAQTPFYAESGGQVGDRGELMA- 514
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
Q V+D +K G H G + +G L VG V+A +D R+R + H+ATH
Sbjct: 515 -----QGCRFVVEDTQK-YGQAIGHLGKVAQGSLRVGERVQAGIDGARRERIRQSHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL+ V+G+ +Q GSLV+ LRFDF+ + ++ ++E ++N I + T
Sbjct: 569 LMHAALRSVLGEHVAQKGSLVSDGALRFDFSHAEAMKPRQIRQVEDIVNAQIRRNLPIDT 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+ M L++AK GA+A+FGEKY QV++ S
Sbjct: 629 QEMGLEEAKAKGAMALFGEKYDAQVRVLS 657
>gi|116623844|ref|YP_826000.1| alanyl-tRNA synthetase [Candidatus Solibacter usitatus Ellin6076]
gi|122253309|sp|Q01XA0.1|SYA_SOLUE RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|116227006|gb|ABJ85715.1| alanyl-tRNA synthetase [Candidatus Solibacter usitatus Ellin6076]
Length = 878
Score = 549 bits (1414), Expect = e-153, Method: Compositional matrix adjust.
Identities = 302/681 (44%), Positives = 429/681 (62%), Gaps = 33/681 (4%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
+G IR+RFLDF+A RGH+V+ S+SLVP DPT+L T AGM QFK +FLG+ R RAA
Sbjct: 2 TGHEIRQRFLDFFAERGHRVVRSSSLVPANDPTLLFTNAGMNQFKDVFLGQEKRDYVRAA 61
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
+SQ+C+R ND+ENVG T RHHTFFEMLGNFSFGDYFK +AI +AW+ T ++GLP
Sbjct: 62 SSQKCVRAGGKHNDLENVGYTRRHHTFFEMLGNFSFGDYFKADAIAYAWDLITKDYGLPK 121
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDF--- 220
+L+++V+ +DDEA E+W K G+P I R+ DNFW G TGPCGPCSEI+YD
Sbjct: 122 EKLYVTVFREDDEAEELWQKVTGIPKSRIFRLDEKDNFWQMGETGPCGPCSEIHYDLGIE 181
Query: 221 HPDRGCSDVDLGDDT--RFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQ 278
+ G DD RF+E +NLVFMQY++ G L PL + +IDTG+GLERIA ILQ
Sbjct: 182 AAEPGREHEQFPDDAGGRFVEIWNLVFMQYDRDQSGKLNPLPRPSIDTGMGLERIAAILQ 241
Query: 279 KVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNI 338
NY+TDLI+PII+ A+E+ V+ ++ RT+ L+I+ DH RA +L+ DGV PSN
Sbjct: 242 GKITNYDTDLIYPIIEHAAEIFGVTPG-ADTRTDTVLRIVADHARATEFLIHDGVVPSNE 300
Query: 339 GRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRI 398
GRGYV+R+++RRA+R R++GI E FL + EL ++ QR+
Sbjct: 301 GRGYVLRKIMRRALRNVRMIGI--------EDPFLYKLTGFVGELMKGPYPELLESIQRV 352
Query: 399 LEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEI 458
K EE R+ T E++ + DA+ ++ + ++P G +F LYDT+G ++
Sbjct: 353 ARVTKDEEHRYATTFLVAERVFN----DAI-KSIQGNTIP---GALSFKLYDTYGLALDE 404
Query: 459 TKEVAEEHGVSVDMKGFDIEMENQRRQSQAA-HNAVKLSVDDSADLAEKIPDTEFLGYDT 517
+++A EHG+++D + FD EME QR +++A+ A K +V + + T+FLGY
Sbjct: 405 QEDMAREHGLAIDRESFDTEMEQQRERARASWKGAEKAAVTPAYQKLVEQGRTKFLGYSE 464
Query: 518 LSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTA 577
L A + V L+V+ + V +V G+ E++L++TPFYAESGGQ+GD+G LY G
Sbjct: 465 LEAASRVVGLIVDKESVQQVPAGAKAELVLDQTPFYAESGGQVGDHGILYSAAGEK---- 520
Query: 578 VVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKK 637
V +V+ + + VH+ + VG + A V LR + +HTATHLL A+L+
Sbjct: 521 VADVETAFPGVPGLTVHR-IAALAPIAVGDTLRAEVAVPLRDATRRNHTATHLLHASLRT 579
Query: 638 VIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDA 697
V+G+ QAGS+V RLRFDF + L ELEE+ERL+N I +QT ++ L+ A
Sbjct: 580 VLGKHVKQAGSIVDPGRLRFDFTHYAGLDHAELEEVERLMNQEILRNTAVQTDILPLEQA 639
Query: 698 KRAGAIAMFGEKYGEQVKISS 718
GA+A+FGEKYG+QV++ S
Sbjct: 640 IATGAMALFGEKYGDQVRVVS 660
>gi|419760289|ref|ZP_14286569.1| alanyl-tRNA synthetase [Thermosipho africanus H17ap60334]
gi|407514617|gb|EKF49428.1| alanyl-tRNA synthetase [Thermosipho africanus H17ap60334]
Length = 859
Score = 549 bits (1414), Expect = e-153, Method: Compositional matrix adjust.
Identities = 300/672 (44%), Positives = 442/672 (65%), Gaps = 37/672 (5%)
Query: 51 DSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQ 110
D IR+ FL+F+ +GHK+LPSASL+PEDP +L TIAGM+ FKPIF GKV R AT Q
Sbjct: 4 DEIRRLFLEFFEKKGHKILPSASLIPEDPQLLFTIAGMVPFKPIFWGKVDPVYTRIATCQ 63
Query: 111 RCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWISV 170
+C+RT D+ENVG+T RHHTFFEMLGNFSFGDYFK+EAI+WAWEF T +P RLW+SV
Sbjct: 64 KCVRTTDIENVGKTPRHHTFFEMLGNFSFGDYFKEEAIEWAWEFVTQVLKIPEERLWVSV 123
Query: 171 YEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWN-SGATGPCGPCSEIYYDFHPDRGCSD- 228
Y+DDDEA+EIW K +GVP I ++G +DNFW +G TGPCGP +EI+YD D SD
Sbjct: 124 YKDDDEAYEIWRK-IGVPSSKILKLGKEDNFWGPAGPTGPCGPDTEIFYDTQRDVPTSDG 182
Query: 229 ---VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYE 285
+ RF+E +NLVF ++ + ++G+L PLK+KNIDTG GLER+A ++Q V NN++
Sbjct: 183 KEPTPANTEGRFVEIWNLVFTEFYQDENGNLLPLKRKNIDTGAGLERMAAMMQGVYNNFD 242
Query: 286 TDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVR 345
TDL PII+ + NV Y + +++ ++++++I DH+RA+V+L+SDGVFPSN GRGYV+R
Sbjct: 243 TDLFAPIIEGICNILNVEY-KKDEKIDVSIRVIADHIRALVFLISDGVFPSNEGRGYVLR 301
Query: 346 RLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKRE 405
R++RRA R G+LLG FL + + + ++ ++ +++ E + E
Sbjct: 302 RILRRAARHGKLLGAN--------APFLHKLVDFVVNKMGNVYPEIVEKKEFTKEIILGE 353
Query: 406 ELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEE 465
E RF+Q L +G +L+++++ RE+ ++SG+ AF LYDT+GFP++I +++AEE
Sbjct: 354 EKRFLQNLNKGLELVEKVV-------RENNG--KISGEMAFKLYDTYGFPLDILRDLAEE 404
Query: 466 HGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDS-ADLAEKIPDTEFLGYDTLSAKAIV 524
+G +D +GF+ ME QR ++ A V+ + DL K +EF+GY+ + V
Sbjct: 405 NGYVLDEQGFNEHMEKQRLLAKNATGDVEFTKRTGYEDLKLK---SEFVGYEKYEEHSKV 461
Query: 525 ESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDV 584
++ V+ + ++ D E++L RTPFYAE GGQI D G + +G N + V+ V
Sbjct: 462 LAIKVS--EFVNEAQDVDCEIVLERTPFYAEKGGQISDTG---IIKGENGEFL---VEYV 513
Query: 585 KKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETS 644
+ VH+G ++ G L VG +V A +D + R+ +HTATHLL AAL+KV+G
Sbjct: 514 YSPTEGIIVHRGKLK-GRLSVGEKVYAKIDIEKRKATARNHTATHLLHAALRKVLGTHVR 572
Query: 645 QAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIA 704
QAGSLV ++LRFDF L E+E++E+++N I +A + + DDA + GA+A
Sbjct: 573 QAGSLVESEKLRFDFTHFNALSVDEIEQVEKMVNNVILEAIDVIVEEKGYDDAVKEGAMA 632
Query: 705 MFGEKYGEQVKI 716
+F EKYG++V++
Sbjct: 633 LFEEKYGDKVRV 644
>gi|421624135|ref|ZP_16065010.1| alanine--tRNA ligase [Acinetobacter baumannii OIFC098]
gi|408702015|gb|EKL47432.1| alanine--tRNA ligase [Acinetobacter baumannii OIFC098]
Length = 885
Score = 549 bits (1414), Expect = e-153, Method: Compositional matrix adjust.
Identities = 298/682 (43%), Positives = 428/682 (62%), Gaps = 48/682 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FL ++ ++GH + S+SLVP DPT+L T AGM QFK FLG R RA TSQ+
Sbjct: 13 IREAFLRYFETQGHTRVASSSLVPANDPTLLFTNAGMNQFKDCFLGLEKRDYVRATTSQK 72
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND++NVG T+RHHTFFEMLGNFSFGDYFK++A+++AWEF T E LP ++
Sbjct: 73 CVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKRDALKFAWEFLTSEQWLALPKDK 132
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
L+++VY DDEA++IWNKE+G+ E I R+G A DNFW G TGPCGPCSEI++
Sbjct: 133 LYVTVYHTDDEAYDIWNKEIGLAPERIIRIGDNKGEKYASDNFWAMGDTGPCGPCSEIFF 192
Query: 219 DF--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARI 276
D H G D RFIE +N VFMQ+N+ DG L L ++DTG+GLERI+ +
Sbjct: 193 DHGEHIWGGLPGSPEEDGDRFIEIWNNVFMQFNRTADGVLHSLPAPSVDTGMGLERISAV 252
Query: 277 LQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPS 336
LQ V +NY+ DL ++K A+ + + D +L+++ DH R+ +L++DGV PS
Sbjct: 253 LQHVNSNYDIDLFQHLLKAAANIIGIE-----DEGQPSLRVVADHARSCCFLIADGVNPS 307
Query: 337 NIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQ 396
N GRGYV+RR+IRRAVR G LG G F + + IE+ +++AR +
Sbjct: 308 NEGRGYVLRRIIRRAVRHGNKLGATG--------TFFYKMLQPLIEVMGQAYPELEARRE 359
Query: 397 RILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPV 456
I L REE +F +TLE+G KLL+ LA +T + G F LYDT+GFP
Sbjct: 360 VIEATLIREEEQFAKTLEQGLKLLEGELAQLKDKT--------IPGATVFKLYDTYGFPT 411
Query: 457 EITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYD 516
++T ++A E G +D GF++EM QR Q A +A K +VD + ++ + +T+F GY
Sbjct: 412 DLTADIARERGFIIDEAGFEVEMAAQR---QRARDAGKFAVDYN-NIVKVEGETQFDGYT 467
Query: 517 TLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQT 576
+ + + ++ +G V +VS+G + ++LN+TPFYAESGGQIGD G +T
Sbjct: 468 NTTGQGQIVAIYKDGVQVDEVSEGDEALIVLNQTPFYAESGGQIGDTGIF------KNET 521
Query: 577 AVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALK 636
+ EV+D KKS G FVH+G + G L+ + VEAIV +R+ +H+ATHLL AAL+
Sbjct: 522 GIFEVQDTKKS-GGAFVHQGIVTVGNLKTSQNVEAIVKADIREATARNHSATHLLHAALR 580
Query: 637 KVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDD 696
+++G Q GSLVA D LRFDF +P+ +L+++ERL+N I + T+++ ++
Sbjct: 581 QILGSHVQQKGSLVASDILRFDFANDQPVSFEQLQQVERLVNAEIIANTAVTTELLDIET 640
Query: 697 AKRAGAIAMFGEKYGEQVKISS 718
AK GA+ +FGEKYG++V++ S
Sbjct: 641 AKAKGAMMLFGEKYGDEVRVLS 662
>gi|91976212|ref|YP_568871.1| alanyl-tRNA synthetase [Rhodopseudomonas palustris BisB5]
gi|123735560|sp|Q13AB9.1|SYA_RHOPS RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|91682668|gb|ABE38970.1| alanyl-tRNA synthetase [Rhodopseudomonas palustris BisB5]
Length = 891
Score = 549 bits (1414), Expect = e-153, Method: Compositional matrix adjust.
Identities = 302/684 (44%), Positives = 425/684 (62%), Gaps = 41/684 (5%)
Query: 48 SSGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRA 106
S + IR FL+++A GH ++PS+ LVP DPT++ T AGM+QFK +F G R RA
Sbjct: 2 SGVNEIRSAFLNYFAKNGHDIVPSSPLVPRNDPTLMFTNAGMVQFKNVFTGLEKRPYHRA 61
Query: 107 ATSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLP 162
TSQ+C+R ND++NVG T+RHHTFFEMLGNFSFGDYFK AI+ AW T E+GLP
Sbjct: 62 TTSQKCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKDRAIELAWNLITKEYGLP 121
Query: 163 ANRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHP 222
+RL ++VY +DDEAF +W K G+P I R+ DNFW G TGPCGPCSEI++D H
Sbjct: 122 KDRLLVTVYSEDDEAFGLWKKIAGLPESKIIRIPTSDNFWQMGDTGPCGPCSEIFFD-HG 180
Query: 223 DR--GCSDVDLGDD-TRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQK 279
D G L +D RFIE +NLVFMQ+ + G+ PL + +IDTG+GLERIA +LQ
Sbjct: 181 DHIFGGPPGSLEEDGDRFIEIWNLVFMQFEQVAPGNRTPLPKPSIDTGMGLERIAAVLQG 240
Query: 280 VPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIG 339
+NYE DL +I+ +EL A +L++I DHLRA +L++DGV PSN G
Sbjct: 241 KHDNYEIDLFQALIRAIAELTG---ADPQGEQKGSLRVIADHLRAASFLIADGVLPSNEG 297
Query: 340 RGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRIL 399
RGYV+RR++RRA+R G+LLG + L A + + + EL V+A E I
Sbjct: 298 RGYVLRRIMRRAMRHGQLLGAREPLMWRLVWALVREMGQAYPEL-------VRA-EAMIE 349
Query: 400 EELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPR---LSGQDAFLLYDTFGFPV 456
E L+ EE RF +TLERG +LD+ +SGS+ + G AF LYDT+GFP+
Sbjct: 350 ETLRLEETRFRKTLERGLTILDE----------KSGSLKKGDMFDGDTAFTLYDTYGFPL 399
Query: 457 EITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSA--DLAEKIPDTEFLG 514
++T++ G+SVD+ F M+ QR +++A+ + ++ L +K+ TEFLG
Sbjct: 400 DLTQDALRNRGISVDIASFTDAMDRQRAKARASWAGSGEAATETVWFGLRDKLGATEFLG 459
Query: 515 YDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQ 574
YDT +A+ +V +L+ +GK V + G ++LN+TPFYAESGGQ+GD G L
Sbjct: 460 YDTETAEGVVTALVKDGKEVEALKAGDAGAIVLNQTPFYAESGGQVGDTGVL------TG 513
Query: 575 QTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAA 634
+ V D K G +FVH GT+ EG ++ + VD R + +H+ATHLL A
Sbjct: 514 EGVRFRVTDTLKKAGDLFVHFGTVEEGTVKPEAALALEVDHSRRSSIRANHSATHLLHEA 573
Query: 635 LKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMAL 694
L++V+G +Q GS+VA DRLRFDF +P+ EL +E + N + + + + T++MA+
Sbjct: 574 LRQVLGDHIAQKGSMVAPDRLRFDFVHQKPITQDELRRVEDIANDIVLENDEVTTRLMAV 633
Query: 695 DDAKRAGAIAMFGEKYGEQVKISS 718
DDA+ AGA A+FGEKYG++V++ S
Sbjct: 634 DDAREAGARALFGEKYGDEVRVVS 657
>gi|294634755|ref|ZP_06713284.1| alanine--tRNA ligase [Edwardsiella tarda ATCC 23685]
gi|451966822|ref|ZP_21920073.1| alanyl-tRNA synthetase [Edwardsiella tarda NBRC 105688]
gi|291091814|gb|EFE24375.1| alanine--tRNA ligase [Edwardsiella tarda ATCC 23685]
gi|451314494|dbj|GAC65435.1| alanyl-tRNA synthetase [Edwardsiella tarda NBRC 105688]
Length = 875
Score = 549 bits (1414), Expect = e-153, Method: Compositional matrix adjust.
Identities = 304/683 (44%), Positives = 418/683 (61%), Gaps = 50/683 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDFY S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 8 IRQAFLDFYHSKGHQVVDSSSLVPNNDPTLLFTNAGMNQFKDVFLGIDKRSYSRATTAQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AI++AWE T F LP +
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIKFAWELLTGAQWFNLPQEK 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+ IW EVGVP E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYESDDEAYNIWANEVGVPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DF--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARI 276
D H G D R+IE +N+VFMQ+N++ DG+L PL + ++DTG+GLERIA +
Sbjct: 188 DHGAHIAGGPPGSPDEDGDRYIEIWNIVFMQFNRQSDGTLLPLPKPSVDTGMGLERIAAV 247
Query: 277 LQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPS 336
LQ V +NY+ DL +I + + + V +D ++ +L++I DH+R+ +L+SDGV PS
Sbjct: 248 LQHVNSNYDIDLFRTLIAETARVIGV-----DDLSSKSLRVIADHIRSCAFLVSDGVLPS 302
Query: 337 NIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQ 396
N GRGYV+RR+IRRAVR G +LG K L + + A EL AR+Q
Sbjct: 303 NEGRGYVLRRIIRRAVRHGHMLGAKESFFYKLVAPLIQVMGSAADEL---------ARQQ 353
Query: 397 RILEE-LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++E+ LK EE +F +TLERG LLD LA T L G+ AF LYDT+GFP
Sbjct: 354 AMVEQVLKTEEEQFARTLERGLALLDDELAQLDGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGY 515
+++T +V E + VD GF+ ME QRR+++ + D L T+F GY
Sbjct: 406 LDLTADVCRERNLKVDEVGFEKAMEAQRRRARESSGFGA----DYNSLIRVEGSTDFTGY 461
Query: 516 DTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
A + +L NG+ V + G + V+L++TPFYAESGGQ+GD G L +
Sbjct: 462 QRQQQMATITALFRNGQAVDALQAGEEGVVVLDQTPFYAESGGQVGDRGELSAS------ 515
Query: 576 TAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAAL 635
V V D + G H G + +G L+VG ++A +D R R ++ H+ATHL+ AAL
Sbjct: 516 -GVSFVVDDTQKYGQAIGHLGKVVQGHLQVGASLQASIDVARRDRIRLSHSATHLMHAAL 574
Query: 636 KKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALD 695
+ V+G +Q GSLV LRFDF+ + ++ ++E ++N I ++T+ M L+
Sbjct: 575 RSVLGTHVAQKGSLVNDGYLRFDFSHPEAMKPQQIRQVEEIVNAQIRRNLPIETQEMGLE 634
Query: 696 DAKRAGAIAMFGEKYGEQVKISS 718
+AK GA+A+FGEKY QV++ S
Sbjct: 635 EAKAKGAMALFGEKYDAQVRVLS 657
>gi|423198291|ref|ZP_17184874.1| alanyl-tRNA synthetase [Aeromonas hydrophila SSU]
gi|404630415|gb|EKB27094.1| alanyl-tRNA synthetase [Aeromonas hydrophila SSU]
Length = 874
Score = 549 bits (1414), Expect = e-153, Method: Compositional matrix adjust.
Identities = 303/685 (44%), Positives = 431/685 (62%), Gaps = 51/685 (7%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S IR FL+++ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA
Sbjct: 4 STSEIRAAFLEYFRSQGHQVVSSSSLVPHNDPTLLFTNAGMNQFKDVFLGADKRAYNRAT 63
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
TSQRC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI++AW F T LP
Sbjct: 64 TSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAIKFAWGFLTEVLQLPK 123
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEI 216
RL ++VY DDEAF+IW KEVGVP + I R+G A DNFW G TGPCGPC+EI
Sbjct: 124 ERLLVTVYATDDEAFDIWEKEVGVPADRIVRIGDNKGAPYASDNFWAMGDTGPCGPCTEI 183
Query: 217 YYDFHPD-----RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLE 271
+YD H D R S + GD RFIE +N+VFMQ+N++ DG++EPL + ++DTG+GLE
Sbjct: 184 FYD-HGDHIWGGRPGSPEEDGD--RFIEIWNVVFMQFNRQADGTMEPLPRPSVDTGMGLE 240
Query: 272 RIARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSD 331
RI+ I+Q V +NYE D+ +IKKA+E+ + D +N +L++I DH+R+ +L++D
Sbjct: 241 RISAIMQGVHSNYEIDIFQALIKKAAEIVG-----TTDLSNQSLRVIADHIRSCAFLVAD 295
Query: 332 GVFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDV 391
GV PSN GRGYV+RR+IRRAVR GR LG F +A + + +++
Sbjct: 296 GVMPSNEGRGYVLRRIIRRAVRHGRKLGAT--------DVFFYKLAAELAAQMKDVAAEL 347
Query: 392 KAREQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDT 451
A+ + L+ EE +F +TL+RG LL+ DAL+ ++ +P G+ F LYDT
Sbjct: 348 IAQLPLVERVLRIEEEQFARTLDRGLLLLE----DALANLGDAKVIP---GEVVFKLYDT 400
Query: 452 FGFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTE 511
+GFP ++T +V E + +D +GF EME QR +++ A ++ ++ ++ L + P
Sbjct: 401 YGFPADLTADVVREREIGIDEEGFKAEMEKQRARAKEA-SSFGVNYNEMLKLDFETP--- 456
Query: 512 FLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQG 571
F GY TL+ + V + V + G + ++L +TPFYAESGGQIGD G L V G
Sbjct: 457 FTGYKTLTERTRVVGIYKGVDEVSGLIAGDEAVIVLEQTPFYAESGGQIGDSGTLKVDDG 516
Query: 572 TNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLL 631
+ V D K+ G +HKG + G LE G EVEA+VD RQ ++H+ THLL
Sbjct: 517 ------IFAVTDTVKA-GKAIIHKGYMELGTLEKGAEVEAVVDGDRRQAIALNHSVTHLL 569
Query: 632 QAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKV 691
AAL++ +G+ +Q GSLV +R+RFDF+ + + +E L+N I + + T++
Sbjct: 570 HAALRQALGEHVTQKGSLVGAERMRFDFSHFEGMTMATIRRVEELVNNQIRANHEIITQL 629
Query: 692 MALDDAKRAGAIAMFGEKYGEQVKI 716
M L++AK AGA+A+FGEKY + V++
Sbjct: 630 MGLEEAKSAGAMALFGEKYEDDVRV 654
>gi|417792180|ref|ZP_12439571.1| alanyl-tRNA synthetase [Cronobacter sakazakii E899]
gi|449307106|ref|YP_007439462.1| alanyl-tRNA ligase [Cronobacter sakazakii SP291]
gi|333953744|gb|EGL71655.1| alanyl-tRNA synthetase [Cronobacter sakazakii E899]
gi|449097139|gb|AGE85173.1| alanyl-tRNA ligase [Cronobacter sakazakii SP291]
Length = 875
Score = 549 bits (1414), Expect = e-153, Method: Compositional matrix adjust.
Identities = 317/689 (46%), Positives = 434/689 (62%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTAQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T F LP +R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQYAWELLTGAQWFNLPKDR 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NYE DL +IK +ANV+ A D +N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYEIDLFQKLIKA---VANVTGA--TDLSNKSLRVIADHIRSCAFLIADGVIP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRA+R G +LG K F + +++ ++K ++
Sbjct: 302 SNENRGYVLRRIIRRAIRHGNMLGAKD--------TFFYKLVGPLVDVMGAAGEELKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ L+ T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELSKLTGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQ------AAHNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRARESSGFGADYNAM-IRVDGA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD A V +L V+GK V +V+ G V+L+ TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDHTELTAKVTALFVDGKSVEQVTAGQQAVVVLDETPFYAESGGQVGDKGELKGN 515
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
T V D +K G H G + GVL+VG V+A VD R R +++H+ATH
Sbjct: 516 GFT------FTVNDTQK-YGQAIGHIGELASGVLKVGEGVKAEVDHARRDRIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G +Q GSLV LRFDF+ + E+ ++E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVAQKGSLVNDKGLRFDFSHFEAMKPEEIRKVEDLVNAQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
VM L+ AK GA+A+FGEKY ++V++ S
Sbjct: 629 NVMDLEAAKAKGAMALFGEKYEDRVRVLS 657
>gi|425092932|ref|ZP_18496016.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
WGLW5]
gi|405611274|gb|EKB84042.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
WGLW5]
Length = 875
Score = 549 bits (1414), Expect = e-153, Method: Compositional matrix adjust.
Identities = 307/687 (44%), Positives = 435/687 (63%), Gaps = 62/687 (9%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTAQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI++AWE T E F LP +
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAIKYAWELLTGENWFALPKEK 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEAF+IW EVGVP E I R+G A DNFW G TGPCGPC+EI++
Sbjct: 128 LWVTVYETDDEAFDIWANEVGVPRERIIRIGDNKGAPFASDNFWQMGDTGPCGPCTEIFF 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +I +++ + D TN +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRDLIASVAKVTGAT-----DLTNKSLRVIADHIRSCAFLVADGVIP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRA+R G +LG K F + I++ ++K ++
Sbjct: 302 SNENRGYVLRRIIRRAIRHGNMLGAKD--------TFFWKLVAPLIDVMGSAGDELKQQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ L+ T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELSKLKGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQ------AAHNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRARESSGFGADYNAM-IRVDGA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD L V +L ++GK V VS G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDHLELNGKVTALFIDGKAVDSVSAGQEAVVILDQTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G AV + + +++G H G + G L+VG V+A VD RQR +++H+ATH
Sbjct: 513 KGAGFSFAVSDTQKYGQAIG----HIGKVASGTLKVGEAVQADVDEARRQRIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G +Q GSLV LRFDF+ + E+ +E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVAQKGSLVNDKALRFDFSHFEAMKPEEIRAVEDLVNAQIRRNLAIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKI 716
+M +D A+ +GA+A+FGEKY ++V++
Sbjct: 629 NIMDIDAARASGAMALFGEKYDDRVRV 655
>gi|386718080|ref|YP_006184406.1| alanyl-tRNA synthetase [Stenotrophomonas maltophilia D457]
gi|384077642|emb|CCH12231.1| Alanyl-tRNA synthetase [Stenotrophomonas maltophilia D457]
Length = 882
Score = 548 bits (1413), Expect = e-153, Method: Compositional matrix adjust.
Identities = 321/695 (46%), Positives = 430/695 (61%), Gaps = 53/695 (7%)
Query: 41 DKSQDFPSSGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKV 99
+ S F +S IR FL+F+ +GH ++PSA LVP DPT+L T +GM+QFK +FLG
Sbjct: 2 NASAKFTTS--QIRSDFLEFFKGKGHTIVPSAPLVPGNDPTLLFTNSGMVQFKDVFLGAE 59
Query: 100 PRQVPRAATSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFS 155
R RAA QRC+R ND++ VG T+RHHTFFEMLGN+SFGDYFKK+AI WAWE
Sbjct: 60 KRSYVRAADVQRCLRAGGKHNDLDQVGYTARHHTFFEMLGNWSFGDYFKKDAIAWAWELL 119
Query: 156 TVEFGLPANRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATG 208
T + LPA RL ++VY+ DDEA+E+W VGVP E I R+G A DNFW TG
Sbjct: 120 TQVWKLPAERLLVTVYQTDDEAYELWRDMVGVPEERIVRIGDNKGAPFASDNFWQMADTG 179
Query: 209 PCGPCSEIYYDFHPDR------GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQK 262
PCGPC+EI+YD H D G D D GD RFIE +NLVFMQ++++ DG+L PL
Sbjct: 180 PCGPCTEIFYD-HGDHIAGGPPGSPDED-GD--RFIEIWNLVFMQFDRQPDGTLVPLPAP 235
Query: 263 NIDTGLGLERIARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHL 322
+DTG+GLER+A ILQ V NYE DL +I+KASEL + D N +L++I DH+
Sbjct: 236 CVDTGMGLERLAAILQHVHTNYEIDLFQALIRKASELTGTA-----DLENKSLRVIADHI 290
Query: 323 RAIVYLLSDGVFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIE 382
RA +L+ DGV PSN GRGYV+RR+IRRA+R G +LG++ L + + E E
Sbjct: 291 RACSFLIVDGVLPSNEGRGYVLRRIIRRALRHGWMLGVRQPFFSKLVPTLVEQMGEAYPE 350
Query: 383 LSTHIDSDVKAREQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSG 442
L +D+ +A L+ EE RF +TL+ G K+ + + A +G +P G
Sbjct: 351 LPAAVDTVTRA--------LQAEEERFAETLDAGMKIFEDVAGKA-----SNGVIP---G 394
Query: 443 QDAFLLYDTFGFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD 502
DAF LYDT+GFP+++T+++A E ++VD+ GFD ME QR ++AA V A+
Sbjct: 395 VDAFRLYDTYGFPLDLTQDIARERDLTVDIAGFDAAMEQQRETARAA-GKFGGGVTLPAE 453
Query: 503 LAEKIPDTEFLGYDTLSAKAI-VESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIG 561
L + T FLGYD L A + V +LL +G+PV G V V+ N+TPFYAESGGQ+G
Sbjct: 454 LVATLSPTLFLGYDRLQADGLSVLALLKDGRPVQSADAGDSVIVITNQTPFYAESGGQVG 513
Query: 562 DYGFLYVTQGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRA 621
D G L G + A V+D +K G H GT+ EG L+VG + VD + R
Sbjct: 514 DTGVL---AGNGVRLA---VEDTQKFAGQFHGHVGTLSEGGLKVGDVLSGQVDGERRGAT 567
Query: 622 KVHHTATHLLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWI 681
++H+ATHLL AAL++V+G Q GSLVA DRLRFDF+ +P+ EL IER +N +
Sbjct: 568 ILNHSATHLLHAALREVLGTHVQQKGSLVAPDRLRFDFSHFQPISAEELAVIERKVNQQV 627
Query: 682 GDANLLQTKVMALDDAKRAGAIAMFGEKYGEQVKI 716
N + MA+ +A GA+A+FGEKYGE V++
Sbjct: 628 RANNAAEVHTMAMQEALDFGAMALFGEKYGEHVRV 662
>gi|407008518|gb|EKE23877.1| hypothetical protein ACD_6C00308G0011 [uncultured bacterium]
Length = 892
Score = 548 bits (1413), Expect = e-153, Method: Compositional matrix adjust.
Identities = 304/692 (43%), Positives = 438/692 (63%), Gaps = 54/692 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FL ++ S+GH + S+SLVP DPT+L T AGM QFK FLG R RA +SQ+
Sbjct: 6 IREAFLRYFESQGHTRVASSSLVPANDPTLLFTNAGMNQFKDCFLGLEKRDYVRAVSSQK 65
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND++NVG T+RHHTFFEMLGNFSFGDYFK++AI++AW+F T E GLP ++
Sbjct: 66 CVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKRDAIKFAWDFLTNEEWLGLPKDK 125
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
L+ +VY DDEAF+IWNKE+G+ I R+G A DNFW G TGPCGPCSEI++
Sbjct: 126 LYATVYHTDDEAFDIWNKEIGLDASRIIRIGDNKGGQYASDNFWAMGDTGPCGPCSEIFF 185
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D RFIE +N VFMQ+N+ DG L PL ++DTG+GLERI+
Sbjct: 186 D-HGDHIWGGLPGSPEEDGDRFIEIWNNVFMQFNRTADGVLHPLPAPSVDTGMGLERISA 244
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSY----AQSNDRTN-----LNLKIIGDHLRAIV 326
+LQ V +NYE DL ++K A+E+ + A++ ++ +LK++ DH R+
Sbjct: 245 VLQHVNSNYEIDLFQHLLKAAAEIIGLDTTALEAEAAEKGTPVQYPASLKVVADHARSCS 304
Query: 327 YLLSDGVFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTH 386
+L++DGV PSN GRGYV+RR+IRRAVR G LG G +F + + IE+
Sbjct: 305 FLIADGVNPSNEGRGYVLRRIIRRAVRHGNKLGATG--------SFFHKMLKPLIEVMGD 356
Query: 387 IDSDVKAREQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAF 446
++ A++ RI +L +EE +F +TLE+G KLL+ LA + GSV + G+ F
Sbjct: 357 AYPELAAQQARIEAQLLKEEEQFAKTLEQGLKLLEGELA------QLKGSV--IPGEVVF 408
Query: 447 LLYDTFGFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEK 506
LYDT+GFP ++T ++A E +++D GF+ EM QR Q A +A K ++D ++ + +
Sbjct: 409 KLYDTYGFPTDLTADIARERDLTIDEAGFETEMAAQR---QRARDAGKFAIDYNS-VVKV 464
Query: 507 IPDTEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFL 566
+T+F GYD + + + ++ +G+ V +V +G + ++LN+TPFYAESGGQIGD G
Sbjct: 465 EGETQFDGYDATAGEGQIIAIYKDGEQVDEVFEGDEALIVLNQTPFYAESGGQIGDTGIF 524
Query: 567 YVTQGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHT 626
T + EV+D KKS G FVH+G + G L+V + VEA V +R +H+
Sbjct: 525 ------KNDTGIFEVQDTKKS-GGAFVHQGIVTMGNLKVTQNVEATVKADIRAATARNHS 577
Query: 627 ATHLLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANL 686
ATHLL AAL++++G Q GSLVA D LRFDF +P+ +L+EIERL+N +
Sbjct: 578 ATHLLHAALRQILGSHVQQKGSLVASDVLRFDFANDQPVSFEQLQEIERLVNAEVIANTA 637
Query: 687 LQTKVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+ T+++ ++ AK GA+ +FGEKYG++V++ S
Sbjct: 638 VSTELLDIESAKAKGAMMLFGEKYGDEVRVLS 669
>gi|397659529|ref|YP_006500231.1| alanyl-tRNA synthetase [Klebsiella oxytoca E718]
gi|394347688|gb|AFN33809.1| Alanyl-tRNA synthetase [Klebsiella oxytoca E718]
Length = 875
Score = 548 bits (1413), Expect = e-153, Method: Compositional matrix adjust.
Identities = 309/689 (44%), Positives = 436/689 (63%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTAQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI++AWE T E F LP +
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAIKYAWELLTGENWFALPKEK 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEAF+IW EVGVP E I R+G A DNFW G TGPCGPC+EI++
Sbjct: 128 LWVTVYETDDEAFDIWANEVGVPRERIIRIGDNKGAPFASDNFWQMGDTGPCGPCTEIFF 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGTPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +IK +++ + D +N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRDLIKSVAKVTGAT-----DLSNKSLRVIADHIRSCAFLIADGVIP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRA+R G +LG K F + I++ ++K ++
Sbjct: 302 SNENRGYVLRRIIRRAIRHGNMLGAKE--------TFFWKLVAPLIDVMGSAGEELKQQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLQGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQ------AAHNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRARESSGFGADYNAM-IRVDGA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD+L V +L ++GK V V+ G + V+L++TPFYAESGGQ+GD G L +
Sbjct: 456 SEFKGYDSLELNGKVTALFIDGKAVDAVNAGQEAVVILDQTPFYAESGGQVGDKGELKGS 515
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+ Q V D +K G H G + G L+VG V+A VD RQR +++H+ATH
Sbjct: 516 GFSFQ------VSDAQK-YGQAIGHIGKLTSGSLKVGDAVQADVDQARRQRIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G +Q GSLV LRFDF+ + E+ +E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVAQKGSLVNDKALRFDFSHFEAMKPEEIRAVEDLVNAQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M +D A+ +GA+A+FGEKY ++V++ S
Sbjct: 629 NIMDIDAARESGAMALFGEKYDDRVRVLS 657
>gi|378980259|ref|YP_005228400.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
HS11286]
gi|419972487|ref|ZP_14487915.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH1]
gi|419980165|ref|ZP_14495451.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH2]
gi|419983590|ref|ZP_14498740.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH4]
gi|419991124|ref|ZP_14506091.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH5]
gi|419997253|ref|ZP_14512050.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH6]
gi|420001053|ref|ZP_14515710.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH7]
gi|420008088|ref|ZP_14522579.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH8]
gi|420013615|ref|ZP_14527925.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH9]
gi|420019461|ref|ZP_14533654.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH10]
gi|420024952|ref|ZP_14538963.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH11]
gi|420029937|ref|ZP_14543765.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH12]
gi|420035665|ref|ZP_14549328.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH14]
gi|420042532|ref|ZP_14556025.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH16]
gi|420048042|ref|ZP_14561357.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH17]
gi|420053114|ref|ZP_14566293.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH18]
gi|420058784|ref|ZP_14571795.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH19]
gi|420065302|ref|ZP_14578108.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH20]
gi|420070900|ref|ZP_14583549.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH21]
gi|420075688|ref|ZP_14588163.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH22]
gi|420084291|ref|ZP_14596553.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH23]
gi|421913374|ref|ZP_16343059.1| Alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
ST258-K26BO]
gi|421914415|ref|ZP_16344062.1| Alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
ST258-K28BO]
gi|424932155|ref|ZP_18350527.1| Alanyl-tRNA synthetase (Alanine--tRNA ligase) [Klebsiella
pneumoniae subsp. pneumoniae KpQ3]
gi|425082834|ref|ZP_18485931.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
WGLW2]
gi|428147858|ref|ZP_18995761.1| Alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
ST512-K30BO]
gi|428934710|ref|ZP_19008218.1| alanyl-tRNA ligase [Klebsiella pneumoniae JHCK1]
gi|428941317|ref|ZP_19014368.1| alanyl-tRNA ligase [Klebsiella pneumoniae VA360]
gi|364519670|gb|AEW62798.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
HS11286]
gi|397346476|gb|EJJ39590.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH2]
gi|397350896|gb|EJJ43982.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH1]
gi|397355222|gb|EJJ48232.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH4]
gi|397363046|gb|EJJ55689.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH6]
gi|397364473|gb|EJJ57103.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH5]
gi|397372578|gb|EJJ65062.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH7]
gi|397379698|gb|EJJ71889.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH9]
gi|397383649|gb|EJJ75783.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH8]
gi|397389153|gb|EJJ81103.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH10]
gi|397398255|gb|EJJ89920.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH11]
gi|397402396|gb|EJJ93999.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH12]
gi|397407682|gb|EJJ99067.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH14]
gi|397415986|gb|EJK07165.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH17]
gi|397416334|gb|EJK07509.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH16]
gi|397424531|gb|EJK15429.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH18]
gi|397431739|gb|EJK22410.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH20]
gi|397436622|gb|EJK27208.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH19]
gi|397440986|gb|EJK31374.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH21]
gi|397448187|gb|EJK38366.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH22]
gi|397450322|gb|EJK40430.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH23]
gi|405599153|gb|EKB72329.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
WGLW2]
gi|407806342|gb|EKF77593.1| Alanyl-tRNA synthetase (Alanine--tRNA ligase) [Klebsiella
pneumoniae subsp. pneumoniae KpQ3]
gi|410112694|emb|CCM85684.1| Alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
ST258-K26BO]
gi|410123171|emb|CCM86687.1| Alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
ST258-K28BO]
gi|426300663|gb|EKV62936.1| alanyl-tRNA ligase [Klebsiella pneumoniae VA360]
gi|426302156|gb|EKV64368.1| alanyl-tRNA ligase [Klebsiella pneumoniae JHCK1]
gi|427542179|emb|CCM91899.1| Alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
ST512-K30BO]
Length = 875
Score = 548 bits (1413), Expect = e-153, Method: Compositional matrix adjust.
Identities = 307/687 (44%), Positives = 435/687 (63%), Gaps = 62/687 (9%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTAQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI++AWE T E F LP +
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAIKYAWELLTGENWFALPKEK 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEAF+IW EVGVP E I R+G A DNFW G TGPCGPC+EI++
Sbjct: 128 LWVTVYETDDEAFDIWANEVGVPRERIIRIGDNKGAPFASDNFWQMGDTGPCGPCTEIFF 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +I +++ + D TN +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRDLIASVAKVTGAT-----DLTNKSLRVIADHIRSCAFLVADGVIP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRA+R G +LG K F + I++ ++K ++
Sbjct: 302 SNENRGYVLRRIIRRAIRHGNMLGAKD--------TFFWKLVAPLIDVMGSAGDELKQQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ L+ T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELSKLKGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQ------AAHNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRARESSGFGADYNAM-IRVDGA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD L V +L ++GK V VS G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDHLELNGKVTALFIDGKAVDSVSAGQEAVVILDQTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G AV + + +++G H G + G L+VG V+A VD RQR +++H+ATH
Sbjct: 513 KGAGFSFAVSDTQKYGQAIG----HIGKVASGTLKVGDAVQADVDEARRQRIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G +Q GSLV LRFDF+ + E+ +E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVAQKGSLVNDKALRFDFSHFEAMKPEEIRAVEDLVNAQIRRNLAIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKI 716
+M +D A+ +GA+A+FGEKY ++V++
Sbjct: 629 NIMDIDAARASGAMALFGEKYDDRVRV 655
>gi|220912769|ref|YP_002488078.1| alanyl-tRNA synthetase [Arthrobacter chlorophenolicus A6]
gi|219859647|gb|ACL39989.1| alanyl-tRNA synthetase [Arthrobacter chlorophenolicus A6]
Length = 898
Score = 548 bits (1413), Expect = e-153, Method: Compositional matrix adjust.
Identities = 293/683 (42%), Positives = 418/683 (61%), Gaps = 39/683 (5%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQRC 112
I KR++DF+ S+GH +PSASLV DP++L T+AGM+ F P + RA + Q+C
Sbjct: 10 ITKRWVDFFVSKGHTAVPSASLVSSDPSLLFTVAGMVPFIPYLTAREEAPYTRATSVQKC 69
Query: 113 IRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE-----FGLPANRLW 167
IRT D+E VG+T+RH TFF+M GNFSFGDYFK++AI++AWE T +GLP LW
Sbjct: 70 IRTGDIEEVGKTARHGTFFQMCGNFSFGDYFKEDAIKYAWELLTTSVDDGGYGLPPELLW 129
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCS 227
++VYE+DDEA E+W K GVP E I++MG DN+WN+G GP GPCSEIYYD P G
Sbjct: 130 VTVYEEDDEAKELWLKNTGVPAERIQKMGKADNYWNTGQPGPAGPCSEIYYDRGPAYGIE 189
Query: 228 DVDLGDDTRFIEFYNLVFMQY------NKKDDGSLEPLKQKNIDTGLGLERIARILQKVP 281
L D+TR+IE +NLVFMQY +K D + L +KNIDTGLG+ER+A ILQ V
Sbjct: 190 GGPLADETRYIEIWNLVFMQYQIDNVRSKDDFDIVGELPKKNIDTGLGMERLAMILQGVE 249
Query: 282 NNYETDLIFPIIKKASELANVSYAQS------NDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
N YETD + P+I KA+EL+ Y + + ++ ++++GDH+R+ + L+SDGV P
Sbjct: 250 NMYETDQVRPVIDKAAELSGKEYTSAETPDDPHHTDDVRMRVVGDHIRSALMLISDGVTP 309
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN GRGYV+RRLIRRAVR+ RLLG+ E A LP + + + + V+
Sbjct: 310 SNEGRGYVLRRLIRRAVRSMRLLGV--------EQACLPDLLPASRDAMKGVYPVVETDF 361
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
RI EE F++T+ G L++ + ++ + ++ LSG+DAF L+DT+GFP
Sbjct: 362 ARISRIAYAEEKAFLRTIASGTARLEEAVKESKAANKQ------LSGEDAFALHDTYGFP 415
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIP--DTEFL 513
+++T E+AEE G+ VD F M+ QR+++QA K D + + + +T F
Sbjct: 416 IDLTLEMAEEAGLKVDEAAFRSLMQEQRQRAQADAKGKKGGHADLSAFQDILAQGETVFT 475
Query: 514 GYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTN 573
GY L ++ V LL G+PV + + G ++E++L+ TPFYAE+GGQ D G +
Sbjct: 476 GYTELDGESRVRGLLTGGRPVQQAATGDEIELVLSETPFYAEAGGQAADTGLI------T 529
Query: 574 QQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQA 633
VVEV DV++ + + VHK +REG + V A VD + R A+ HT TH++ A
Sbjct: 530 GDGFVVEVLDVQRPVKGLSVHKAIVREGEIGADSLVRAAVDRERRHAAEQAHTGTHIVHA 589
Query: 634 ALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMA 693
AL +++G E +Q GS LRFDF + L EIE + N I + ++TKVM
Sbjct: 590 ALHQILGPEATQRGSFNKAGYLRFDFAWGEGLSTATRSEIEEVSNLAIRNNYAVETKVMG 649
Query: 694 LDDAKRAGAIAMFGEKYGEQVKI 716
L +AK GA+A+FGE YG +V++
Sbjct: 650 LAEAKALGAMALFGENYGSEVRV 672
>gi|429214615|ref|ZP_19205778.1| alanyl-tRNA synthetase [Pseudomonas sp. M1]
gi|428154901|gb|EKX01451.1| alanyl-tRNA synthetase [Pseudomonas sp. M1]
Length = 874
Score = 548 bits (1413), Expect = e-153, Method: Compositional matrix adjust.
Identities = 302/680 (44%), Positives = 429/680 (63%), Gaps = 48/680 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FL F+ +GH + S+SL+P DPT+L T AGM QFK FLG R RA TSQ+
Sbjct: 6 IREAFLRFFEEKGHTRVASSSLIPANDPTLLFTNAGMNQFKDCFLGLEKRAYTRATTSQK 65
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI +AWEF T + LP ++
Sbjct: 66 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAIHYAWEFLTSDKWLNLPKDK 125
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VY DDEA++IW +EVGVP E + R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 126 LWVTVYASDDEAYDIWTQEVGVPAERMVRIGDNKGAPYASDNFWAMGDTGPCGPCTEIFY 185
Query: 219 DFHPD--RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARI 276
D D G D R+IE +N VFMQ+N+ DG + PL ++DTG+GLERI+ +
Sbjct: 186 DHGADIWGGPPGSPEEDGDRYIEIWNNVFMQFNRTADGVMHPLPAPSVDTGMGLERISAV 245
Query: 277 LQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPS 336
LQ V +NYE DL ++K ++E + +ND +LK++ DH+R+ +L++DGV PS
Sbjct: 246 LQHVHSNYEIDLFQSLLKASAE----AIGCANDDAP-SLKVVADHIRSCSFLIADGVLPS 300
Query: 337 NIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQ 396
N GRGYV+RR+IRRA R G LG KG + A + + E EL K ++
Sbjct: 301 NEGRGYVLRRIIRRACRHGNKLGAKGSFFHKIVAALVAEMGEAFPEL--------KQQQA 352
Query: 397 RILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPV 456
I LK EE +F +TLE+G K+L+Q L++ GSV + G F LYDT+GFPV
Sbjct: 353 HIERVLKTEEEQFAKTLEQGLKILEQDLSEL------KGSV--IPGNVVFKLYDTYGFPV 404
Query: 457 EITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYD 516
++T ++A E +++D +GF+ EME QR + A +A +D +A L + DT FLGY
Sbjct: 405 DLTNDIARERSLTLDEEGFEREMEAQRER---ARSASAFGMDYNA-LVKVDGDTRFLGYQ 460
Query: 517 TLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQT 576
+S + +L +GK V K+++G + V+L++TPFYAESGGQ+GD G L +
Sbjct: 461 GVSGAGQIIALFKDGKAVEKLNEGEEGVVVLDQTPFYAESGGQVGDCGTL------SGAG 514
Query: 577 AVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALK 636
+V+D K+ G +H G + +G L VG V+A VD +RQ ++H+ATHLL AAL+
Sbjct: 515 VRFDVRDTTKA-GGAHLHHGIVAQGSLSVGAAVKAEVDASVRQATALNHSATHLLHAALR 573
Query: 637 KVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDD 696
+V+G Q GSLV RLRFDF+ + +L+++E ++N I ++++T+ +D
Sbjct: 574 QVLGDHVQQKGSLVDSQRLRFDFSHFEAIKPEQLKQLEDIVNREIRANSVVETEETDIDT 633
Query: 697 AKRAGAIAMFGEKYGEQVKI 716
AK GA+A+FGEKYG+QV++
Sbjct: 634 AKAKGAMALFGEKYGDQVRV 653
>gi|39995259|ref|NP_951210.1| alanyl-tRNA ligase [Geobacter sulfurreducens PCA]
gi|409910706|ref|YP_006889171.1| alanyl-tRNA synthetase [Geobacter sulfurreducens KN400]
gi|48428506|sp|P61701.1|SYA_GEOSL RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|39982021|gb|AAR33483.1| alanyl-tRNA synthetase [Geobacter sulfurreducens PCA]
gi|298504264|gb|ADI82987.1| alanyl-tRNA synthetase [Geobacter sulfurreducens KN400]
Length = 875
Score = 548 bits (1413), Expect = e-153, Method: Compositional matrix adjust.
Identities = 290/682 (42%), Positives = 416/682 (60%), Gaps = 39/682 (5%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
+G IR RFL F+A RGH V+PS+ L+P DPT+L AGM QFK FLG R RA
Sbjct: 2 TGKEIRARFLKFFADRGHAVVPSSPLIPHNDPTLLFANAGMNQFKDCFLGLEKRDYVRAC 61
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
+SQ+C+R ND+ENVGRT+RHHTFFEMLGNFSFGDYFKKEAI +AWEF T + GL
Sbjct: 62 SSQKCVRAGGKHNDLENVGRTARHHTFFEMLGNFSFGDYFKKEAIAFAWEFLTKDLGLDK 121
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPD 223
+RL+++VY DDDEA +IW+ + GVP E I R G DNFW G TGPCGPCSEI++D P+
Sbjct: 122 DRLYVTVYTDDDEAADIWHLQEGVPRERIYRFGEKDNFWAMGDTGPCGPCSEIFWDNGPE 181
Query: 224 RGCSDVDLG---DDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKV 280
GC D D R++E +N VFMQ+N+ DG L PL + ++DTG+GLERI+ ++Q V
Sbjct: 182 VGCGSPDCAVGCDCDRYMEIWNNVFMQFNRSADGVLTPLPKPSVDTGMGLERISTVMQGV 241
Query: 281 PNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGR 340
+NY+TDL II +L+ Y S ++ +++++++ DH+RA +L+ DGV PSN GR
Sbjct: 242 KSNYDTDLFQGIIGHVEKLSGKRYRHS-EKDDVSMRVMADHVRATTFLICDGVLPSNEGR 300
Query: 341 GYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSD----VKAREQ 396
GYV+RR++RRA R ++LG F + + +E + D + RE+
Sbjct: 301 GYVLRRIMRRAARHAKMLG------------FAEPVICRMVEAVNAMMGDAYPELLEREE 348
Query: 397 RILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPV 456
I + ++ EE RF +TL+RG +L++ +AD + R + G+ F LYDTFGFP
Sbjct: 349 YIRKVIRAEEERFAETLDRGLAILNEAVADLKNEGRTV-----IPGETLFRLYDTFGFPT 403
Query: 457 EITKEVAEEHGVSVDMKGFDIEMENQRRQSQA--AHNAVKLSVDDSADLAEKIPDTEFLG 514
++T ++ G ++D GF+ ME QR Q++ + + + L + + F G
Sbjct: 404 DLTADIVRSEGFTIDEDGFEACMERQREQAREHWKGSGEEGIAEVHKTLHSRGVRSRFTG 463
Query: 515 YDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQ 574
Y+ +A + V LL G V + + G VE++ + TPFY ESGGQ+GD G + +
Sbjct: 464 YEARTAYSPVTVLLKGGAEVAEATAGDRVEIITDATPFYGESGGQVGDTGTI------ST 517
Query: 575 QTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAA 634
+A VEV + + + VH+GT+ EG + G + V P R +HTATHLLQ+A
Sbjct: 518 GSAHVEVTETLRPFPDLIVHRGTVVEGTIRQGDACDLKVAPG-RDATARNHTATHLLQSA 576
Query: 635 LKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMAL 694
L++V+G Q+GSLV DRLRFDF + E+ +E ++N I + + + MAL
Sbjct: 577 LRQVLGDHVKQSGSLVGPDRLRFDFTHFAAMTPEEIRRVEEIVNSCIMANDDVHAREMAL 636
Query: 695 DDAKRAGAIAMFGEKYGEQVKI 716
D+A GA A+FGEKYG+ V++
Sbjct: 637 DEAMEIGATALFGEKYGDTVRV 658
>gi|118340595|gb|ABK80645.1| putative alanyl-tRNA synthetase class IIc [uncultured marine
Nitrospinaceae bacterium]
Length = 878
Score = 548 bits (1413), Expect = e-153, Method: Compositional matrix adjust.
Identities = 295/681 (43%), Positives = 424/681 (62%), Gaps = 36/681 (5%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
+GD +RK+FL ++ RGH V+ S +LVP+ DPT++ T AGM+QFK +FLG+ R RA
Sbjct: 2 TGDELRKKFLQYFEDRGHTVVSSYALVPKNDPTLMFTNAGMVQFKDVFLGEEKRDYNRAV 61
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
+ Q+C+R ND+E VGRTSRHHTFFEMLGNFSFGDYFKKEAIQ+ WEF T GLP
Sbjct: 62 SVQKCVRAGGKHNDLEMVGRTSRHHTFFEMLGNFSFGDYFKKEAIQFGWEFLTDVIGLPR 121
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPD 223
+RL+ISV+EDDD+AF IW ++ +P E I ++G DNFW G+TGPCGPCSEI+ D
Sbjct: 122 DRLYISVFEDDDDAFNIWVDDIKMPRERIYKLGEKDNFWAMGSTGPCGPCSEIFIDQGKA 181
Query: 224 RGCS--DVDLGDDT-RFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKV 280
GC ++G D RF+E +NLVFMQY++ G L PL IDTG+GLER+A ++Q
Sbjct: 182 IGCGQPSCEVGCDCDRFLEIWNLVFMQYDRDKAGKLTPLPHPCIDTGMGLERLAAVVQGR 241
Query: 281 PNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGR 340
NY+TDL+ II A+ + Y + N+ +++L+++ DH RA V+L+SDGV PSN GR
Sbjct: 242 TTNYDTDLMMSIITVAARITGKEYGKQNE-VDVSLRVLTDHARASVFLISDGVIPSNEGR 300
Query: 341 GYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILE 400
GYV+R++IRRA+R G+LL K G F I K IE ++ + I +
Sbjct: 301 GYVLRKIIRRALRHGKLLEQK--------GPFFHRITSKVIEDFKGAYPELSGNSEFIQK 352
Query: 401 ELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITK 460
+ EE F TL G + L++++ + +S+ + + + G++ F LYDT+GFP ++ +
Sbjct: 353 VVINEEESFSNTLHYGTQRLEEII-EKVSKDK----LCTIPGEEIFKLYDTYGFPTDLVE 407
Query: 461 EVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSA-----DLAEKIPDTEFLGY 515
E A++ G+++DM+G+ M QR + A N+ K S + + + T F GY
Sbjct: 408 ETAKDAGLTLDMEGYTRAMNEQRTK---ATNSWKGSGEKEVPPFYREFLQSSAPTVFEGY 464
Query: 516 DTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
T + + ++L + PV S G ++E L ++TPFY ESGGQ GD G + +N+
Sbjct: 465 GTTQGQGKILAILKDHAPVESASTGDEIEFLTDKTPFYGESGGQTGDSG-----RASNEN 519
Query: 576 TAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAAL 635
+ + D K L + VHK I G + G ++ V P++R ++H+ATHLLQAAL
Sbjct: 520 VQ-LSLDDATKPLPGLIVHKAKIISGTMRNGETLKLEVHPQVRGNTALNHSATHLLQAAL 578
Query: 636 KKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALD 695
K+V+G+ QAGSLVA DRLRFD+ PL D E IE +N I D + T+ M +D
Sbjct: 579 KEVLGEHIKQAGSLVASDRLRFDYTHFSPLTDKERVRIESRVNEKIRDNIQVATQEMDID 638
Query: 696 DAKRAGAIAMFGEKYGEQVKI 716
A + GA+A+FGEKYG+ V++
Sbjct: 639 TAIKEGAVALFGEKYGDTVRV 659
>gi|182439827|ref|YP_001827546.1| alanyl-tRNA synthetase [Streptomyces griseus subsp. griseus NBRC
13350]
gi|326780491|ref|ZP_08239756.1| alanyl-tRNA synthetase [Streptomyces griseus XylebKG-1]
gi|205830221|sp|B1W3I1.1|SYA_STRGG RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|178468343|dbj|BAG22863.1| putative alanyl-tRNA synthetase [Streptomyces griseus subsp.
griseus NBRC 13350]
gi|326660824|gb|EGE45670.1| alanyl-tRNA synthetase [Streptomyces griseus XylebKG-1]
Length = 889
Score = 548 bits (1413), Expect = e-153, Method: Compositional matrix adjust.
Identities = 307/678 (45%), Positives = 429/678 (63%), Gaps = 33/678 (4%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQRC 112
IR+R+L F+ RGH +PSASL+ +DPT+LL AGM+ FKP FLG+V PR + Q+C
Sbjct: 6 IRRRWLSFFEERGHTAVPSASLIADDPTLLLVPAGMVPFKPYFLGEVKPPAPRVTSVQKC 65
Query: 113 IRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFST--VE---FGLPANRLW 167
+RT D+E VG+T+RH TFF+M GNFSFGDYFK+ AIQ AWE T VE +GL +LW
Sbjct: 66 VRTPDIEEVGKTTRHGTFFQMCGNFSFGDYFKEGAIQLAWEALTNSVEDGGYGLDPEKLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCS 227
I+VY DDDEA +IW ++GVP E I+R+G DNFW+ G GPCGPCSEI YD P+ G
Sbjct: 126 ITVYLDDDEAEQIWRDKIGVPAERIQRLGKKDNFWSMGVPGPCGPCSEINYDRGPEFGVE 185
Query: 228 DVDLGDDTRFIEFYNLVFMQY------NKKDDGSLEPLKQKNIDTGLGLERIARILQKVP 281
+D R++E +NLVFMQY K+D L L KNIDTGLGLER+A ILQ V
Sbjct: 186 GGPAVNDERYVEIWNLVFMQYERGAGDGKEDFPILGDLPSKNIDTGLGLERLAMILQGVQ 245
Query: 282 NNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRG 341
N YETD + ++ KA+EL V Y N T+++L+++ DH+R V L+ DGV P N GRG
Sbjct: 246 NMYETDTLRVVMDKATELTGVRYGAENS-TDVSLRVVADHIRTSVMLIGDGVTPGNEGRG 304
Query: 342 YVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEE 401
YV+RR++RRA+R RLLG G +L + ++ ++ EL T +RI
Sbjct: 305 YVLRRIMRRAIRNMRLLGATGTVVKDLIDVVIDTMGQQYPELITD--------RKRIETV 356
Query: 402 LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKE 461
EE F++ L+ G +L+ A++ T+ +G L+G AFLL+DT+GFP+++T E
Sbjct: 357 ALAEEAAFLKALKGGTNILET----AVTETKAAGG-QVLAGDKAFLLHDTWGFPIDLTLE 411
Query: 462 VAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLS-VDDSA--DLAEKIPDTEFLGYDTL 518
+A E G+SVD GF M+ QR +++A A K D SA ++A+ TEF GY +L
Sbjct: 412 MAAEQGLSVDEDGFRRLMQEQRDKAKADARAKKTGHADLSAYREVADTAGATEFTGYASL 471
Query: 519 SAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAV 578
+ ++ + LLV+G P ++G +VEV+L+RTPFYAE GGQ+ D G + + G AV
Sbjct: 472 AGESTIVGLLVDGVPSPAATEGDEVEVVLDRTPFYAEGGGQLADTGRIRLDTG-----AV 526
Query: 579 VEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKV 638
+EV+DV+K + V VHKG ++ G + VG V A +D R+ H+ATHL AL+
Sbjct: 527 IEVRDVQKPVPGVHVHKGVVQVGEVTVGAPVFASIDATRRRAIARAHSATHLTHQALRDA 586
Query: 639 IGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAK 698
+G +QAGS + R RFDF + T L ++E+ IN + +Q +VM++D+AK
Sbjct: 587 LGPTAAQAGSENSPGRFRFDFGSPAAVPGTVLTDVEQRINEVLSRELDVQAEVMSIDEAK 646
Query: 699 RAGAIAMFGEKYGEQVKI 716
+ GAIA FGEKYGE+V++
Sbjct: 647 KQGAIAEFGEKYGERVRV 664
>gi|329999040|ref|ZP_08303295.1| alanine--tRNA ligase [Klebsiella sp. MS 92-3]
gi|328538480|gb|EGF64595.1| alanine--tRNA ligase [Klebsiella sp. MS 92-3]
Length = 875
Score = 548 bits (1413), Expect = e-153, Method: Compositional matrix adjust.
Identities = 307/687 (44%), Positives = 435/687 (63%), Gaps = 62/687 (9%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTAQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI++AWE T E F LP +
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAIKYAWELLTGENWFALPKEK 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEAF+IW EVGVP E I R+G A DNFW G TGPCGPC+EI++
Sbjct: 128 LWVTVYETDDEAFDIWANEVGVPRERIIRIGDNKGAPFASDNFWQMGDTGPCGPCTEIFF 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +I +++ + D TN +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRDLIASVAKVTGAT-----DLTNKSLRVIADHIRSCAFLVADGVIP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRA+R G +LG K F + I++ ++K ++
Sbjct: 302 SNENRGYVLRRIIRRAIRHGNMLGAKD--------TFFWKLVAPLIDVMGSAGDELKQQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ L+ T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELSKLKGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQ------AAHNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRARESSGFGADYNAM-IRVDGA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD L V +L ++GK V VS G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDHLELNGKVTALFIDGKAVDSVSAGQEAVVILDQTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G AV + + +++G H G + G L+VG V+A VD RQR +++H+ATH
Sbjct: 513 KGVGFSFAVSDTQKYGQAIG----HIGKVASGTLKVGDAVQADVDEARRQRIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G +Q GSLV LRFDF+ + E+ +E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVAQKGSLVNDKALRFDFSHFEAMKPEEIRAVEDLVNAQIRRNLAIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKI 716
+M +D A+ +GA+A+FGEKY ++V++
Sbjct: 629 NIMDIDAARASGAMALFGEKYDDRVRV 655
>gi|429115756|ref|ZP_19176674.1| Alanyl-tRNA synthetase [Cronobacter sakazakii 701]
gi|426318885|emb|CCK02787.1| Alanyl-tRNA synthetase [Cronobacter sakazakii 701]
Length = 856
Score = 548 bits (1413), Expect = e-153, Method: Compositional matrix adjust.
Identities = 317/689 (46%), Positives = 434/689 (62%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTAQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AIQ+AWE T F LP +R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQYAWELLTGAQWFNLPKDR 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEA+EIW KEVG+P E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NYE DL +IK +ANV+ A D +N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYEIDLFQKLIKA---VANVTGA--TDLSNKSLRVIADHIRSCAFLIADGVIP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRA+R G +LG K F + +++ ++K ++
Sbjct: 302 SNENRGYVLRRIIRRAIRHGNMLGAKD--------TFFYKLVGPLVDVMGAAGEELKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ L+ T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELSKLTGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQ------AAHNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRARESSGFGADYNAM-IRVDGA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD A V +L V+GK V +V+ G V+L+ TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDHTELTAKVTALFVDGKSVEQVTAGQQAVVVLDETPFYAESGGQVGDKGELKGN 515
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
T V D +K G H G + GVL+VG V+A VD R R +++H+ATH
Sbjct: 516 GFT------FTVNDTQK-YGQAIGHIGELASGVLKVGEGVKAEVDHARRDRIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G +Q GSLV LRFDF+ + E+ ++E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVAQKGSLVNDKGLRFDFSHFEAMKPEEIRKVEDLVNAQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
VM L+ AK GA+A+FGEKY ++V++ S
Sbjct: 629 NVMDLEAAKAKGAMALFGEKYEDRVRVLS 657
>gi|312143796|ref|YP_003995242.1| alanyl-tRNA synthetase [Halanaerobium hydrogeniformans]
gi|311904447|gb|ADQ14888.1| alanyl-tRNA synthetase [Halanaerobium hydrogeniformans]
Length = 877
Score = 548 bits (1413), Expect = e-153, Method: Compositional matrix adjust.
Identities = 299/675 (44%), Positives = 428/675 (63%), Gaps = 29/675 (4%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
+GD IR+ +LDF+ S+ H VL SA LVP+ DP++L AGM FK F G + PR A
Sbjct: 4 TGDEIRQAYLDFFESKDHLVLDSAPLVPKNDPSLLWINAGMAPFKAYFDGSLEPPHPRIA 63
Query: 108 TSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
TSQ+CIRTND+ENVG+T+RHHT+FEMLGNFSFGDYFK++AI WAWEF T +RLW
Sbjct: 64 TSQKCIRTNDIENVGKTARHHTYFEMLGNFSFGDYFKEKAIIWAWEFVTEVLEFEEDRLW 123
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCS 227
I++Y+DDDEA +IW K+VG+P E I RMG +NFW G TGPCGPCSEI+YD + G S
Sbjct: 124 ITIYKDDDEAHDIWQKKVGLPEERIVRMGKKENFWQIG-TGPCGPCSEIHYDRGIEFGDS 182
Query: 228 DVDL--GDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYE 285
D+ G+ RF+E +NLVF QYN + G + L KNIDTG+GLER+A ILQ N+E
Sbjct: 183 SEDVLGGEGDRFLEIWNLVFTQYNYTEAGEYKELPNKNIDTGMGLERVASILQNTKTNFE 242
Query: 286 TDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVR 345
TDLI PII + ++Y Q +D + ++I DH+R++ +SDG PSN GRGYV+R
Sbjct: 243 TDLIKPIIDEVVAKTGIAY-QKDDESQTAYRVIADHIRSVAVAISDGALPSNEGRGYVIR 301
Query: 346 RLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKRE 405
RLIRRA R GR +G FL + + E+ + D+K + + +K E
Sbjct: 302 RLIRRAARYGRKIG--------FTEPFLYELVKTTAEVVKGVAPDLKQQLAHVENVIKSE 353
Query: 406 ELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEE 465
E F++TLE+G +L+ L D + +E LSG++AF+LYDT+GFP+++TK++A E
Sbjct: 354 EESFLKTLEQGLNILEDFLVDLKAENKEV-----LSGKNAFILYDTYGFPLDLTKDIASE 408
Query: 466 HGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDD----SADLAEKIPDTEFLGYDTLSAK 521
G+ VD +GF+ EM QR++++ A S + A ++ EF GY +L+ +
Sbjct: 409 AGIMVDEEGFEAEMAAQRKRAREAREETSFSSGEIDKLYASFKAEVEAVEFTGYHSLTEE 468
Query: 522 AIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEV 581
+ V ++ + + + KG + ++L++TPFYAESGGQ+GD G + + N + V+
Sbjct: 469 SEVVGIVRENQKLQSIKKGEEANLVLHKTPFYAESGGQLGDKG---IIKNENFEAKVLNT 525
Query: 582 KDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQ 641
+ + VHK + +G L+ G V+A+V R+ HH+ATHLL LK+V+G+
Sbjct: 526 ----FARAKLPVHKVKVEKGELKRGDSVKAVVYDDRRKATARHHSATHLLHKTLKEVLGE 581
Query: 642 ETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAG 701
+Q+GSLVA ++LRFDF L D EL EIE+ IN + + ++T+ AL++AK G
Sbjct: 582 HVNQSGSLVAPEKLRFDFTHFSALSDQELNEIEKRINKAVMENYPVETEEKALEEAKAMG 641
Query: 702 AIAMFGEKYGEQVKI 716
A A+FGEKY E+V++
Sbjct: 642 AEALFGEKYDEEVRV 656
>gi|206578751|ref|YP_002236967.1| alanyl-tRNA synthetase [Klebsiella pneumoniae 342]
gi|206567809|gb|ACI09585.1| alanyl-tRNA synthetase [Klebsiella pneumoniae 342]
Length = 875
Score = 548 bits (1412), Expect = e-153, Method: Compositional matrix adjust.
Identities = 307/687 (44%), Positives = 434/687 (63%), Gaps = 62/687 (9%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTAQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI++AWE T E F LP +
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAIKYAWELLTGENWFALPKEK 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEAF+IW EVGVP E I R+G A DNFW G TGPCGPC+EI++
Sbjct: 128 LWVTVYETDDEAFDIWANEVGVPRERIIRIGDNKGAPFASDNFWQMGDTGPCGPCTEIFF 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +I +++ + D TN +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRDLIASVAKVTGAT-----DLTNKSLRVIADHIRSCAFLIADGVIP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRA+R G +LG K F + I + ++K ++
Sbjct: 302 SNENRGYVLRRIIRRAIRHGNMLGAKD--------TFFWKLVAPLIAVMGSAGEELKQQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ L+ T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELSKLKGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQ------AAHNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRARESSGFGADYNAM-IRVDGA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD L V +L ++GK V VS G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDHLELNGKVTALFIDGKAVDSVSAGQEAVVILDQTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G AV + + +++G H G + G L+VG V+A VD RQR +++H+ATH
Sbjct: 513 KGAGFSFAVSDTQKYGQAIG----HIGKVASGSLKVGDAVQADVDEARRQRIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G +Q GSLV LRFDF+ + E+ +E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVAQKGSLVNDKALRFDFSHFEAMKPEEIRAVEDLVNAQIRRNLAIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKI 716
+M +D A+ +GA+A+FGEKY ++V++
Sbjct: 629 NIMDIDAARASGAMALFGEKYDDRVRV 655
>gi|375256922|ref|YP_005016092.1| alanyl-tRNA synthetase [Klebsiella oxytoca KCTC 1686]
gi|365906400|gb|AEX01853.1| alanyl-tRNA synthetase [Klebsiella oxytoca KCTC 1686]
Length = 875
Score = 548 bits (1412), Expect = e-153, Method: Compositional matrix adjust.
Identities = 309/689 (44%), Positives = 435/689 (63%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTAQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI++AWE T E F LP +
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAIKYAWELLTGENWFALPKEK 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEAF+IW EVGVP E I R+G A DNFW G TGPCGPC+EI++
Sbjct: 128 LWVTVYETDDEAFDIWANEVGVPRERIIRIGDNKGAPFASDNFWQMGDTGPCGPCTEIFF 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGTPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +IK +++ + D +N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRDLIKSVAKVTGAT-----DLSNKSLRVIADHIRSCAFLIADGVIP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRA+R G +LG K F + I++ ++K ++
Sbjct: 302 SNENRGYVLRRIIRRAIRHGNMLGAKE--------TFFWKLVAPLIDVMGSAGEELKQQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLQGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQ------AAHNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRARESSGFGADYNAM-IRVDGA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD+L V +L ++GK V V+ G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDSLELNGKVTALFIDGKAVDAVNAGQEAVVILDQTPFYAESGGQVGDKGELKGA 515
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+ Q V D +K G H G + G L+VG V+A VD RQR +++H+ATH
Sbjct: 516 GFSFQ------VSDAQK-YGQAIGHIGKLTSGSLKVGDAVQADVDQARRQRIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G +Q GSLV LRFDF+ + E+ +E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVAQKGSLVNDKALRFDFSHFEAMKPEEIRAVEDLVNAQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M +D A+ +GA+A+FGEKY ++V++ S
Sbjct: 629 NIMDIDAARESGAMALFGEKYDDRVRVLS 657
>gi|297616546|ref|YP_003701705.1| alanyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
gi|297144383|gb|ADI01140.1| alanyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
Length = 877
Score = 548 bits (1412), Expect = e-153, Method: Compositional matrix adjust.
Identities = 294/681 (43%), Positives = 428/681 (62%), Gaps = 35/681 (5%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
+ IRK FLD++A GH V+ S+SLVP DPT+L T AGM QFK +FLG R RA
Sbjct: 3 TSSEIRKMFLDYFAENGHTVVESSSLVPANDPTLLFTNAGMNQFKDVFLGIDKRPYTRAT 62
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
+SQ+C+R ND+E VGRT+RHHTFFEMLGNFSFGDYFK+EAI +AW+ T GLP
Sbjct: 63 SSQKCVRAGGKHNDLETVGRTARHHTFFEMLGNFSFGDYFKREAIFYAWDLLTRVIGLPP 122
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYD---- 219
RLW++++ DDDEAFE+W + G+ + I RMG DNFW G TGPCGPCSEI YD
Sbjct: 123 ERLWVTIFTDDDEAFELWQEIAGISPQKIVRMGEKDNFWAMGDTGPCGPCSEIIYDRGEK 182
Query: 220 FHPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQK 279
+ D + + D R++E +NLVFMQ+N+ + G+L PL + +IDTG+GLERI ILQ
Sbjct: 183 YRCDAPLCALGVCDCDRWLEIWNLVFMQFNRDEAGNLTPLPRPSIDTGMGLERITSILQG 242
Query: 280 VPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIG 339
V +N++TDL PII+K E+ Y + ++I DH RA +L+ DGV PSN G
Sbjct: 243 VDSNFDTDLFIPIIQKIEEMTGKKYDRGP--GGFPFRVIADHSRACTFLIGDGVLPSNEG 300
Query: 340 RGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRIL 399
RGYV+RR++RRAVR GRLLGI E FL + ++ D+ +++ +
Sbjct: 301 RGYVLRRILRRAVRFGRLLGI--------EAPFLYRMVGVVVDKMKDSYPDLVDKQEFVA 352
Query: 400 EELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEIT 459
+ ++ EE RF TL G + + +++ + R+ +SGQDAF+LYDT+GFP+++T
Sbjct: 353 KVVRMEEERFFVTLNEGIRKVGEIIERCQAEGRKD-----ISGQDAFMLYDTYGFPLDLT 407
Query: 460 KEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDS--ADLAEKIPDTEFLGYDT 517
+++AEE+G+ V+ + F+ ME QR +++ A + A++ E IP T+F GY
Sbjct: 408 EDMAEENGLGVNKEDFNRLMEEQRERARRAQKGEDAFAQEKRLAEMLEGIPSTDFEGYQR 467
Query: 518 LSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTA 577
L +++++ + + + G + ++L +TPFYAESGGQ+ D G + ++GT
Sbjct: 468 LFTLTQIQAIISGDEELDLIRDGGAI-LVLAQTPFYAESGGQVADKGVIKGSEGT----- 521
Query: 578 VVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKK 637
V DVKK G + +H G + +G+L EV+A VD + R +HTATHLL AL+
Sbjct: 522 -FIVDDVKKVAGWI-LHYGRV-QGILVKNEEVQAEVDEQRRLATARNHTATHLLHRALRM 578
Query: 638 VIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDA 697
V+G+ Q GSLV +RLRFDF+ PL + E++ IE ++N I D ++ + L++A
Sbjct: 579 VVGEHAQQKGSLVEPERLRFDFSHFAPLTEEEIQAIEDIVNRKIWDLEKVEVDLATLEEA 638
Query: 698 KRAGAIAMFGEKYGEQVKISS 718
K+ GA+A+FGEKYG++V++ S
Sbjct: 639 KQKGAMALFGEKYGDEVRVIS 659
>gi|254391331|ref|ZP_05006535.1| alanyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
gi|197705022|gb|EDY50834.1| alanyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
Length = 869
Score = 548 bits (1412), Expect = e-153, Method: Compositional matrix adjust.
Identities = 305/678 (44%), Positives = 425/678 (62%), Gaps = 33/678 (4%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQRC 112
IR+R+L F+ RGH V+PSASL+ +DPT+LL AGM+ FKP FLG+ PRA + Q+C
Sbjct: 7 IRRRWLSFFEERGHTVVPSASLIADDPTLLLINAGMVPFKPYFLGETKPPFPRATSVQKC 66
Query: 113 IRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE-----FGLPANRLW 167
+RT D+E VG+T+RH TFF+M GNFSFGDYFK+ AI+ +WE T +GL +LW
Sbjct: 67 VRTPDIEEVGKTTRHGTFFQMCGNFSFGDYFKEGAIKLSWELLTTPVEDGGYGLEPEKLW 126
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCS 227
I+VY+DDDEA +IW VGVP E I+R+G DNFW+ G GPCGPCSEI YD P G
Sbjct: 127 ITVYQDDDEAEQIWRDVVGVPAERIQRLGKKDNFWSMGVPGPCGPCSEINYDRGPAFGAE 186
Query: 228 DVDLGDDTRFIEFYNLVFMQY------NKKDDGSLEPLKQKNIDTGLGLERIARILQKVP 281
+D R++E +NLVFMQY K+D L L KNIDTGLGLER+A ILQ V
Sbjct: 187 GGPAVNDERYVEIWNLVFMQYERGAGEGKEDFPILGDLPSKNIDTGLGLERLAMILQGVQ 246
Query: 282 NNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRG 341
N YETD + ++ KA+EL V Y ++ ++++L++I DH+R V L+ DGV P N GRG
Sbjct: 247 NMYETDTLRVVMDKATELTGVRYG-ADHASDVSLRVIADHIRTSVMLIGDGVTPGNEGRG 305
Query: 342 YVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEE 401
YV+RR++RRA+R RLLG G L + ++ E+ EL T RI
Sbjct: 306 YVLRRIMRRAIRNMRLLGATGPVVAALVDVVVRTMGEQYPELVTD--------RTRIEAV 357
Query: 402 LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKE 461
EE RF++TL G +L+ + +A + G+V L+G AFLL+DT+GFP+++T E
Sbjct: 358 ALAEEARFLKTLNAGTNVLEGAITEAKA---TGGTV--LAGDKAFLLHDTWGFPIDLTLE 412
Query: 462 VAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLS-VDDSA--DLAEKIPDTEFLGYDTL 518
+A E G+SVD GF M+ QR +++A A K D SA ++A+ TEF GY
Sbjct: 413 IAAEQGLSVDEDGFRRLMKEQRAKAKADAKAKKTGHADLSAYREVADGSGATEFTGYAAT 472
Query: 519 SAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAV 578
++ + LLV+G P ++G +VEV+L+RTPFYAE GGQ+ D G + + G AV
Sbjct: 473 EGESTIVGLLVDGVPSPAATEGDEVEVVLDRTPFYAEGGGQLADQGRIKLDSG-----AV 527
Query: 579 VEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKV 638
+EV+DV++ + V VHKG+++ G + VG A +D K R+ H+ATHL AL+
Sbjct: 528 IEVRDVQQPVPGVSVHKGSVQVGEVTVGASAYAAIDVKRRRAIARAHSATHLTHQALRDA 587
Query: 639 IGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAK 698
+G +QAGS + R RFDF + + L ++E+ IN + +Q +VM+LD+AK
Sbjct: 588 LGPTAAQAGSENSPGRFRFDFGAPSAVPGSVLTDVEQRINEVLSRELDVQAEVMSLDEAK 647
Query: 699 RAGAIAMFGEKYGEQVKI 716
+ GAIA FGEKYGE+V++
Sbjct: 648 KQGAIAEFGEKYGERVRV 665
>gi|344199958|ref|YP_004784284.1| alanyl-tRNA synthetase [Acidithiobacillus ferrivorans SS3]
gi|343775402|gb|AEM47958.1| alanyl-tRNA synthetase [Acidithiobacillus ferrivorans SS3]
Length = 878
Score = 548 bits (1412), Expect = e-153, Method: Compositional matrix adjust.
Identities = 296/675 (43%), Positives = 422/675 (62%), Gaps = 33/675 (4%)
Query: 52 SIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQ 110
+IR+ FL+++ +GH+++PS+ L+P DPT+L T AGM+ FK +FLG R RA +SQ
Sbjct: 5 AIRQAFLEYFVEQGHQIVPSSPLIPRNDPTLLFTNAGMVPFKDVFLGLETRPYRRAVSSQ 64
Query: 111 RCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRL 166
RC+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK+E I +AW F T LP +L
Sbjct: 65 RCMRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKREVIGFAWRFLTERLDLPPEKL 124
Query: 167 WISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGC 226
WI+VYE+DDEA +IW E+G+ + R G DNFW+ G TGPCGPCSEI+YD P
Sbjct: 125 WITVYEEDDEAADIWINEIGIDPARLSRCGEKDNFWSMGDTGPCGPCSEIFYDHGPHIPG 184
Query: 227 SDVDL--GDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNY 284
D R+IE +NLVFMQ+++ G+L L + ++DTG+GLER+A +LQ V NNY
Sbjct: 185 GPPGSPEADGDRYIEIWNLVFMQFDRDSSGTLTHLPKPSVDTGMGLERLAAVLQGVHNNY 244
Query: 285 ETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVV 344
+TDL P+I A+ ++ +Y S+ T+ +L+++ DH+RA +L++DGV P+N GRGYV+
Sbjct: 245 DTDLFKPLIAAAASISGKTYG-SDTATDTSLRVLADHIRACSFLITDGVLPANEGRGYVL 303
Query: 345 RRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEE-LK 403
RR+IRRAVR GR LG++ L + + EL+ R QR +E L+
Sbjct: 304 RRIIRRAVRHGRKLGMENVFFHQLVAPLVAEMGSAFPELT---------RAQREVERALE 354
Query: 404 REELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVA 463
REE RF +TLERG LL++ +A + G + F L DTFGFPV++T ++A
Sbjct: 355 REETRFRETLERGLSLLEEAIAGLAAGAAIPGEI-------IFRLADTFGFPVDLTADIA 407
Query: 464 EEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSA--DLAEKIPDTEFLGYDTLSAK 521
E + +DM+G++ M QR +S+AA + DLA ++P T F GY + +
Sbjct: 408 RERDLVMDMEGYEAAMAEQRSRSRAAWAGSGEVKTERVYHDLAMRLPTTVFTGYTACADE 467
Query: 522 AIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEV 581
V +L+ +G+ V + G V+L+RTPFY ESGGQ GD G L +A+ V
Sbjct: 468 GKVLALIRDGEEVAFLEAGDAGAVILDRTPFYGESGGQAGDRGEL------QSDSALFAV 521
Query: 582 KDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQ 641
+D +K LG + VH G + L+VG V A VD R+ HH+ATHLL AAL+ V+G
Sbjct: 522 RDTQKPLGHLHVHLGHLTSSRLQVGDVVLASVDEVGRRATAAHHSATHLLHAALRNVLGS 581
Query: 642 ETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAG 701
Q GSLV +RLRFDF+ P+ +L EIER++N I + +T+V+ + +A+ G
Sbjct: 582 HVQQKGSLVNPERLRFDFSQPEPVTAAQLREIERVVNAAIRNNVGAETRVLPVAEAQALG 641
Query: 702 AIAMFGEKYGEQVKI 716
A+A+FGEKYG++V++
Sbjct: 642 AMALFGEKYGDEVRV 656
>gi|310778164|ref|YP_003966497.1| alanyl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
gi|309747487|gb|ADO82149.1| alanyl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
Length = 868
Score = 548 bits (1412), Expect = e-153, Method: Compositional matrix adjust.
Identities = 304/676 (44%), Positives = 436/676 (64%), Gaps = 37/676 (5%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
+G+ IR+RF++F+ + HK SASL+P+DPT+LLT+AGM+ FKP FLG+ R T
Sbjct: 3 TGNEIRQRFVEFFKEKEHKHYESASLIPDDPTLLLTVAGMVPFKPFFLGQKEAPNSRVVT 62
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
Q+CIRTND+ENVG+T+RHHTFFEMLGNFSFGDYFK+EAI W+WEF T GL ++WI
Sbjct: 63 YQKCIRTNDLENVGKTARHHTFFEMLGNFSFGDYFKEEAIAWSWEFITEVLGLEKEKMWI 122
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYD----FHPDR 224
SV+ DDEA +IW ++ +P E I R+G +DN+W++G TG CGPCSEIY D + D
Sbjct: 123 SVFTTDDEAEKIWIEKCNIPKERIVRLGEEDNWWSAGPTGSCGPCSEIYVDMGIEYGGDE 182
Query: 225 GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNY 284
D D RF+E +NLVF ++NKK+DG+LEPL +KNIDTG GLERIA ++QK NNY
Sbjct: 183 NSKPGDPEADDRFLEIWNLVFTEWNKKEDGTLEPLPKKNIDTGAGLERIASVVQKKINNY 242
Query: 285 ETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVV 344
ETDLI PII++A L + Y ++ ++T+ +LK+I DH+R I +L++DGV PSN GRGYV+
Sbjct: 243 ETDLILPIIEEAGRLTSSEYGKT-EKTDFSLKVIADHIRGISFLINDGVLPSNEGRGYVL 301
Query: 345 RRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKR 404
RR++RRAVR GRLLG + FL + +K +E+ ++ + I + +K
Sbjct: 302 RRVLRRAVRHGRLLGTSEN--------FLYKLVDKVVEIMKGAYPEILENMEHIKKIIKI 353
Query: 405 EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAE 464
EE +F TL +G QM+ D + + +ESG +LSG+ F LYDT+GFP E+T+E+ E
Sbjct: 354 EEEKFSHTLGQGM----QMVNDEIEKAKESGE-NKLSGEITFKLYDTYGFPYELTEEICE 408
Query: 465 EHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDS--ADLAEKIPDTEFLGYDTLSAKA 522
E V V ++ F +ME Q++++++A V DS + +K T F GY+ L K+
Sbjct: 409 EKDVEVYLEEFTAKMEEQKKRARSAREVVMEKGQDSFVEEFYDKYGKTVFEGYEKLQNKS 468
Query: 523 IVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVK 582
IV ++ + V ++ N+TP YAESGGQ D+G + +++V+
Sbjct: 469 IVYH--------VENIDENKVMLIFNKTPLYAESGGQASDHG---TVTADGLKGKIIDVQ 517
Query: 583 DVKKSLGSVFVHKGTIREGV--LEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIG 640
K+ +F+H + EG+ L+ G EV VD + R+ +HTATHLL ALK V+G
Sbjct: 518 KQKE----IFMHTVVVDEGMDLLKKGLEVTLTVDDERRRDIMRNHTATHLLHKALKDVLG 573
Query: 641 QETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRA 700
QAGSLV DRLRFDF + + +LEE+E+++N I L+ + M LD+AK +
Sbjct: 574 SHVQQAGSLVDADRLRFDFTHYEAVTRDQLEEVEKIVNRQIFKNTSLKVQHMTLDEAKES 633
Query: 701 GAIAMFGEKYGEQVKI 716
G+ A+FG+KYG+ V++
Sbjct: 634 GSTALFGDKYGDLVRV 649
>gi|83944501|ref|ZP_00956954.1| alanyl-tRNA synthetase [Sulfitobacter sp. EE-36]
gi|83844703|gb|EAP82587.1| alanyl-tRNA synthetase [Sulfitobacter sp. EE-36]
Length = 886
Score = 548 bits (1412), Expect = e-153, Method: Compositional matrix adjust.
Identities = 294/678 (43%), Positives = 417/678 (61%), Gaps = 36/678 (5%)
Query: 51 DSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATS 109
+ IR FL ++ +GH + PS+ LVP DPT++ +GM+QFK +F G R RA T+
Sbjct: 5 NDIRSTFLGYFEKQGHSIQPSSPLVPRNDPTLMFANSGMVQFKNLFTGVETRDYSRATTA 64
Query: 110 QRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANR 165
Q+C+R ND++NVG T+RHHTFFEMLGNFSFGDYFK EAI ++WE T E G+ NR
Sbjct: 65 QKCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKAEAIAFSWELITKELGIDPNR 124
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDR- 224
L+++VY DDEA EIW K G+P + I R+ DDNFW G TGPCGPCSEI+YD H D
Sbjct: 125 LYVTVYHTDDEAAEIWKKVAGLPDDRIIRIATDDNFWMMGPTGPCGPCSEIFYD-HGDHI 183
Query: 225 --GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPN 282
G D RF+E +NLVFMQY + +DGS L ++IDTG+G+ER+A +LQ +
Sbjct: 184 WGGPPGSPEEDGDRFVEIWNLVFMQYEQFEDGSRTALPNQSIDTGMGIERVAALLQGTND 243
Query: 283 NYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGY 342
NY TDL+ +I+ + A+ S + + ++I DHLR+ +L++DGV PSN GRGY
Sbjct: 244 NYATDLMRNLIEAS---AHASSTDPDGPGKTHHRVIADHLRSTSFLIADGVMPSNDGRGY 300
Query: 343 VVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEEL 402
V+RR++RRA+R LLG+K L + + EL + I E L
Sbjct: 301 VLRRIMRRAMRHAHLLGLKDPLMHRLVPELVRQMGGAYPELGQ--------AQSLITETL 352
Query: 403 KREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEV 462
EE RF QTL+RG KLLD D L +P G+ AF LYDT+GFPV++T++
Sbjct: 353 LLEETRFKQTLDRGLKLLD----DELKGLPAGADLP---GEAAFKLYDTYGFPVDLTQDA 405
Query: 463 AEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSA--DLAEKIPDTEFLGYDTLSA 520
E VD++GF+ M+ Q+ +++AA + + D + D+AEK T+FLGYDT +A
Sbjct: 406 LREQDRKVDLEGFNAAMDAQKAKARAAWSGSGEAADATIWFDVAEKSGTTDFLGYDTETA 465
Query: 521 KAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVE 580
+ + +L+ +G V +V +G V++ LN+TPFYAESGGQ+GD G + G VV
Sbjct: 466 EGQIVALIQDGAQVAEVKQGDAVQIALNQTPFYAESGGQVGDTGTIKTDSG------VVT 519
Query: 581 VKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIG 640
V D +K+ G VF+H G + EG ++ + VD R + +H+ATHLL AL+K +G
Sbjct: 520 VTDTRKTAG-VFIHIGEVTEGTVKTSQAAVLDVDHARRTSIRANHSATHLLNEALRKTLG 578
Query: 641 QETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRA 700
Q GSL A DRLRFD++ + P+ +L +E +N +I ++T++M DDA+
Sbjct: 579 DHVMQRGSLNAADRLRFDYSHNHPMTADQLAAVEEEVNSYIRQNTAVETRIMTPDDAREM 638
Query: 701 GAIAMFGEKYGEQVKISS 718
GA A+FGEKYG++V++ S
Sbjct: 639 GAQALFGEKYGDEVRVVS 656
>gi|338533096|ref|YP_004666430.1| alanyl-tRNA synthetase [Myxococcus fulvus HW-1]
gi|337259192|gb|AEI65352.1| alanyl-tRNA synthetase [Myxococcus fulvus HW-1]
Length = 897
Score = 548 bits (1412), Expect = e-153, Method: Compositional matrix adjust.
Identities = 302/690 (43%), Positives = 434/690 (62%), Gaps = 43/690 (6%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
+ IR+ FL F+ RGH+ + S+SLVP DPT++ T AGM+QFK +F G+ R RA
Sbjct: 6 TASEIREAFLKFFEERGHRRVASSSLVPANDPTLMFTNAGMVQFKDVFTGRETRDYRRAT 65
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
TSQ+C+R ND++NVG T+RHHTFFEMLGNFSFGDYFK +AI + WEF T GL
Sbjct: 66 TSQKCVRAGGKHNDLDNVGFTARHHTFFEMLGNFSFGDYFKPDAIAYGWEFVTRTLGLST 125
Query: 164 NRLWISVYED------DDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIY 217
+RL ++V+ D+EA+ +W K+ GVP E I ++G DNFW G TGPCGPCSEI+
Sbjct: 126 DRLAVTVFNGEGGTPWDEEAYALWKKQ-GVPAERIYKLGLKDNFWAMGDTGPCGPCSEIH 184
Query: 218 YDFHPDRGCSDVDLG--------DDTRFIEFYNLVFMQYNKKD-DGSLEPLKQKNIDTGL 268
Y D C++ G D R++E +NLVFMQ+ +K+ D L PL + +IDTG
Sbjct: 185 YHQGDDIPCAEEAEGKKCLGVACDCDRWLEIWNLVFMQFERKEKDAPLIPLPKPSIDTGA 244
Query: 269 GLERIARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYL 328
GLERIA ++Q +NYETDL I+ SEL YAQ T + +++ DH RA +L
Sbjct: 245 GLERIAAVVQGKRSNYETDLFQNILATVSELCGKPYAQE---TGASQRVVADHSRAAAFL 301
Query: 329 LSDGVFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHID 388
+SDGV PSN GRGYV+RR++RRA+R G LG L+ F + ++ IEL +
Sbjct: 302 ISDGVQPSNEGRGYVLRRIMRRAIRHGTQLG--------LDDVFFFKVVDRVIELMSDAY 353
Query: 389 SDVKAREQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLL 448
++K ILE + EE F QTL RG KL+++ LS+ +++G +LSG FLL
Sbjct: 354 PELKESRTFILEVCRHEETSFRQTLSRGLKLIEE----ELSKLQKAGG-KQLSGDVVFLL 408
Query: 449 YDTFGFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIP 508
+ T+GFP ++T+ +A+E G VD+ F+ +E + +++ A + K + + LAE++
Sbjct: 409 HGTYGFPWDLTQIIAKERGFDVDLPRFEQILEEEANKNKFAGSGEKATGEVYLKLAERLG 468
Query: 509 DTEFLGYDTLSAKAI--VESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFL 566
TEFLGY+ + + +++ +G V + S+G VE++L+RTPFY ESGGQ+GD G +
Sbjct: 469 TTEFLGYEGEGHEGEGSIRAIVKDGVEVTQASQGDTVELVLDRTPFYGESGGQMGDTGRV 528
Query: 567 YVTQGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHT 626
G AV +V D ++ + + VH + EG +VG V+A VD + R+ + +H+
Sbjct: 529 VGHGGK----AVAKVTDAQRPVPGLVVHSVEVSEGTFKVGDMVQAGVDAERRKSIRANHS 584
Query: 627 ATHLLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANL 686
ATHLL ALK V+G+ QAGS+VA D LRFDF P +LE++E L+NGWI D
Sbjct: 585 ATHLLHKALKLVLGEHVKQAGSVVAPDYLRFDFAHFSPATSAQLEQVEDLVNGWIRDNAG 644
Query: 687 LQTKVMALDDAKRAGAIAMFGEKYGEQVKI 716
+T++M+L+DAK++GA+AMFGEKYGE V++
Sbjct: 645 AETRIMSLEDAKKSGAVAMFGEKYGETVRV 674
>gi|307730458|ref|YP_003907682.1| alanyl-tRNA synthetase [Burkholderia sp. CCGE1003]
gi|307584993|gb|ADN58391.1| alanyl-tRNA synthetase [Burkholderia sp. CCGE1003]
Length = 890
Score = 548 bits (1412), Expect = e-153, Method: Compositional matrix adjust.
Identities = 303/692 (43%), Positives = 417/692 (60%), Gaps = 47/692 (6%)
Query: 43 SQDFPS---SGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGK 98
SQD P IR++FL F+ S+GH ++ S+SLVP DPT+L T +GM+QFK +FLG
Sbjct: 9 SQDRPPHAMKAAEIREKFLKFFESKGHTIVRSSSLVPGNDPTLLFTNSGMVQFKDVFLGA 68
Query: 99 VPRQVPRAATSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEF 154
R RA T+QR +R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI +AWE
Sbjct: 69 ESRPYSRATTAQRSVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAIHYAWEL 128
Query: 155 STVEFGLPANRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGAT 207
T + LP +LW++VY +DDEA +IW KEVGVPVE I R+G A DNFW T
Sbjct: 129 LTGVYQLPKEKLWVTVYHEDDEAHDIWAKEVGVPVERIIRIGDNKGARYASDNFWQMADT 188
Query: 208 GPCGPCSEIYYDFHPD--RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNID 265
GPCGPCSEI+YD PD G D R+IE +NLVFMQ+N+ G++ PL ++ +D
Sbjct: 189 GPCGPCSEIFYDHGPDVWGGPPGSPEEDGDRYIEIWNLVFMQFNRDAQGNMTPLPKQCVD 248
Query: 266 TGLGLERIARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAI 325
TG+GLERIA +LQ V +NYE DL +IK A+ VS D N +LK+I DH+RA
Sbjct: 249 TGMGLERIAAVLQHVHSNYEIDLFQALIKAAARETGVS-----DLANNSLKVIADHIRAC 303
Query: 326 VYLLSDGVFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELST 385
+L+ DGV P N GRGYV+RR++RRA+R G LG K G+F + +E
Sbjct: 304 SFLIVDGVIPGNEGRGYVLRRIVRRAIRHGYKLGKK--------GSFFHRMVADLVEQMG 355
Query: 386 HIDSDVKAREQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDA 445
++K + R+ + L++EE RF +T+E G +L+ LA+ E L G+ A
Sbjct: 356 SAYPELKDAQARVTDVLRQEEERFFETIEHGMSILENALAEL-----EKKGARTLDGELA 410
Query: 446 FLLYDTFGFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAE 505
F L+DT+GFP+++T +V E V+VD FD M QR Q++AA K+ S L
Sbjct: 411 FKLHDTYGFPLDLTADVCREREVTVDEAAFDEAMARQREQARAA-GKFKM----SQGLEY 465
Query: 506 KIPDTEFLGYDTLS-AKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYG 564
T F GY+ + A V +L V+G V +V+ G V+L+ TPFYAESGGQ+GD G
Sbjct: 466 SGAKTTFHGYEEIVFDDAKVVALYVDGASVQEVAHGQQTVVVLDHTPFYAESGGQVGDQG 525
Query: 565 FLYVTQGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVH 624
L + V D K V H GT+ +G L+VG V+A +D R R +
Sbjct: 526 LL------ANASVRFAVTDTLKVQADVVGHHGTLEQGTLKVGDVVKAEIDAVRRARTARN 579
Query: 625 HTATHLLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDA 684
H+ATHL+ AL++V+G Q GSLV D+ RFDF + P+ D ++ +E ++N +
Sbjct: 580 HSATHLMHKALREVLGSHVQQKGSLVDPDKTRFDFAHNAPMTDEQIRRVEEIVNAEVLAN 639
Query: 685 NLLQTKVMALDDAKRAGAIAMFGEKYGEQVKI 716
+VM D+A + GA+A+FGEKYG++V++
Sbjct: 640 APGIVRVMPFDEAVKGGAMALFGEKYGDEVRV 671
>gi|406039863|ref|ZP_11047218.1| alanyl-tRNA ligase [Acinetobacter ursingii DSM 16037 = CIP 107286]
Length = 878
Score = 548 bits (1412), Expect = e-153, Method: Compositional matrix adjust.
Identities = 296/683 (43%), Positives = 432/683 (63%), Gaps = 50/683 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FL ++ S+GH + S+SLVP DPT+L T AGM QFK FLG R RA +SQ+
Sbjct: 6 IREAFLRYFESQGHTRVASSSLVPANDPTLLFTNAGMNQFKDCFLGLEKRDYVRAVSSQK 65
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND++NVG T+RHHTFFEMLGNFSFGDYFK+ A+++AW+F T E GLP ++
Sbjct: 66 CVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKENALKFAWDFLTSEQWLGLPKDK 125
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
L+++VY DDEA++IWNKE+G+ E I R+G A DNFW G TGPCGPCSEI++
Sbjct: 126 LYVTVYHTDDEAYDIWNKEIGLAPERIIRIGDNKGEKYASDNFWAMGDTGPCGPCSEIFF 185
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D RFIE +N VFMQ+N+ DG L PL ++DTG+GLERI+
Sbjct: 186 D-HGDHIWGGLPGTPEEDGDRFIEIWNNVFMQFNRTADGVLHPLPAPSVDTGMGLERISA 244
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +IK A E+ V D+ +L+++ DH R+ +L++DGV P
Sbjct: 245 VLQHVNSNYDIDLFQHLIKSACEIIGV-----QDQAQPSLRVVADHARSCCFLIADGVNP 299
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN GRGYV+RR+IRRAVR G LG G F + + I++ ++K +
Sbjct: 300 SNEGRGYVLRRIIRRAVRHGNKLGATG--------TFFYKMLQPLIDVMGEAYPELKHDQ 351
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
RI L +EE +F +TLE+G KLL+ LA + ++G+ F LYDT+GFP
Sbjct: 352 ARIEATLIKEEEQFAKTLEQGLKLLEGELAQLTGKV--------IAGETVFKLYDTYGFP 403
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGY 515
++T ++A E + +D GF+ EME QRR+ A +A K +VD ++ + + +T+F GY
Sbjct: 404 TDLTADIARERDLEIDEVGFEREMEAQRRR---ARDAGKFAVDYNS-IVKVDGETQFDGY 459
Query: 516 DTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
+ + + + ++ +G+ V +V +G + ++LN+TPFYAESGGQIGD G +
Sbjct: 460 NATAGQGQIIAIYKDGEQVDEVVEGDEALIVLNQTPFYAESGGQIGDTGIF------KNE 513
Query: 576 TAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAAL 635
T + EV+D KKS G FVH+G + G L+ ++VEA V +R +H+ATHLL AAL
Sbjct: 514 TGIFEVQDTKKS-GGAFVHQGIVTMGSLKASQQVEATVKADIRAATARNHSATHLLHAAL 572
Query: 636 KKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALD 695
++++G+ Q GSLVA D LRFDF +P+ +L+++E+L+N + + +V+ ++
Sbjct: 573 RQILGKHVQQKGSLVASDILRFDFANDQPVTFEQLQQVEQLVNREVIANTAVGVEVLDIE 632
Query: 696 DAKRAGAIAMFGEKYGEQVKISS 718
AK GA+ +FGEKYG++V++ S
Sbjct: 633 SAKAKGAMMLFGEKYGDEVRVLS 655
>gi|294811565|ref|ZP_06770208.1| Alanyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
gi|326440050|ref|ZP_08214784.1| alanyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
gi|294324164|gb|EFG05807.1| Alanyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
Length = 889
Score = 548 bits (1412), Expect = e-153, Method: Compositional matrix adjust.
Identities = 305/678 (44%), Positives = 425/678 (62%), Gaps = 33/678 (4%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQRC 112
IR+R+L F+ RGH V+PSASL+ +DPT+LL AGM+ FKP FLG+ PRA + Q+C
Sbjct: 6 IRRRWLSFFEERGHTVVPSASLIADDPTLLLINAGMVPFKPYFLGETKPPFPRATSVQKC 65
Query: 113 IRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE-----FGLPANRLW 167
+RT D+E VG+T+RH TFF+M GNFSFGDYFK+ AI+ +WE T +GL +LW
Sbjct: 66 VRTPDIEEVGKTTRHGTFFQMCGNFSFGDYFKEGAIKLSWELLTTPVEDGGYGLEPEKLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCS 227
I+VY+DDDEA +IW VGVP E I+R+G DNFW+ G GPCGPCSEI YD P G
Sbjct: 126 ITVYQDDDEAEQIWRDVVGVPAERIQRLGKKDNFWSMGVPGPCGPCSEINYDRGPAFGAE 185
Query: 228 DVDLGDDTRFIEFYNLVFMQY------NKKDDGSLEPLKQKNIDTGLGLERIARILQKVP 281
+D R++E +NLVFMQY K+D L L KNIDTGLGLER+A ILQ V
Sbjct: 186 GGPAVNDERYVEIWNLVFMQYERGAGEGKEDFPILGDLPSKNIDTGLGLERLAMILQGVQ 245
Query: 282 NNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRG 341
N YETD + ++ KA+EL V Y ++ ++++L++I DH+R V L+ DGV P N GRG
Sbjct: 246 NMYETDTLRVVMDKATELTGVRYG-ADHASDVSLRVIADHIRTSVMLIGDGVTPGNEGRG 304
Query: 342 YVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEE 401
YV+RR++RRA+R RLLG G L + ++ E+ EL T RI
Sbjct: 305 YVLRRIMRRAIRNMRLLGATGPVVAALVDVVVRTMGEQYPELVTD--------RTRIEAV 356
Query: 402 LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKE 461
EE RF++TL G +L+ + +A + G+V L+G AFLL+DT+GFP+++T E
Sbjct: 357 ALAEEARFLKTLNAGTNVLEGAITEAKA---TGGTV--LAGDKAFLLHDTWGFPIDLTLE 411
Query: 462 VAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLS-VDDSA--DLAEKIPDTEFLGYDTL 518
+A E G+SVD GF M+ QR +++A A K D SA ++A+ TEF GY
Sbjct: 412 IAAEQGLSVDEDGFRRLMKEQRAKAKADAKAKKTGHADLSAYREVADGSGATEFTGYAAT 471
Query: 519 SAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAV 578
++ + LLV+G P ++G +VEV+L+RTPFYAE GGQ+ D G + + G AV
Sbjct: 472 EGESTIVGLLVDGVPSPAATEGDEVEVVLDRTPFYAEGGGQLADQGRIKLDSG-----AV 526
Query: 579 VEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKV 638
+EV+DV++ + V VHKG+++ G + VG A +D K R+ H+ATHL AL+
Sbjct: 527 IEVRDVQQPVPGVSVHKGSVQVGEVTVGASAYAAIDVKRRRAIARAHSATHLTHQALRDA 586
Query: 639 IGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAK 698
+G +QAGS + R RFDF + + L ++E+ IN + +Q +VM+LD+AK
Sbjct: 587 LGPTAAQAGSENSPGRFRFDFGAPSAVPGSVLTDVEQRINEVLSRELDVQAEVMSLDEAK 646
Query: 699 RAGAIAMFGEKYGEQVKI 716
+ GAIA FGEKYGE+V++
Sbjct: 647 KQGAIAEFGEKYGERVRV 664
>gi|445434189|ref|ZP_21439882.1| alanine--tRNA ligase [Acinetobacter baumannii OIFC021]
gi|444756594|gb|ELW81134.1| alanine--tRNA ligase [Acinetobacter baumannii OIFC021]
Length = 883
Score = 548 bits (1412), Expect = e-153, Method: Compositional matrix adjust.
Identities = 300/683 (43%), Positives = 428/683 (62%), Gaps = 50/683 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FL ++ ++GH + S+SLVP DPT+L T AGM QFK FLG R RA TSQ+
Sbjct: 11 IREAFLRYFETQGHTRVASSSLVPANDPTLLFTNAGMNQFKDCFLGLEKRDYVRATTSQK 70
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND++NVG T+RHHTFFEMLGNFSFGDYFK++A+++AWEF T E LP +R
Sbjct: 71 CVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKRDALKFAWEFLTSEQWLALPKDR 130
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
L+++VY DDEA++IWNKE+G+ E I R+G A DNFW G TGPCGPCSEI++
Sbjct: 131 LYVTVYHTDDEAYDIWNKEIGLAPERIIRIGDNKGEKYASDNFWAMGDTGPCGPCSEIFF 190
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D RFIE +N VFMQ+N+ DG L PL ++DTG+GLERI+
Sbjct: 191 D-HGDHIWGGLPGSPEEDGDRFIEIWNNVFMQFNRTADGVLHPLPAPSVDTGMGLERISA 249
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL ++K A+ + + D +L+++ DH R+ +L++DGV P
Sbjct: 250 VLQHVNSNYDIDLFQHLLKAAANIIGIE-----DEGQPSLRVVADHARSCCFLIADGVNP 304
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN GRGYV+RR+IRRAVR G LG G F + + IE+ +++AR
Sbjct: 305 SNEGRGYVLRRIIRRAVRHGNKLGATG--------TFFYKMLQPLIEVMGQAYPELEARR 356
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
I L REE +F +TLE+G KLL+ LA +T + G F LYDT+GFP
Sbjct: 357 DVIEATLIREEEQFAKTLEQGLKLLEGELAQLKDKT--------IPGATVFKLYDTYGFP 408
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGY 515
++T ++A E G +D GF++EM QR Q A +A K +VD ++ + + +T+F GY
Sbjct: 409 TDLTADIARERGFIIDEAGFEVEMAAQR---QRARDAGKFAVDYNS-IVKVEGETQFDGY 464
Query: 516 DTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
+ + + ++ +G V +VS+G + ++LN+TPFYAESGGQIGD G +
Sbjct: 465 INTTGQGQIVAIYKDGVQVDEVSEGDEALIVLNQTPFYAESGGQIGDTGIF------KNE 518
Query: 576 TAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAAL 635
T + EV+D KKS G FVH+G + G L+ + VEAIV +R+ +H+ATHLL AAL
Sbjct: 519 TGIFEVQDTKKS-GGAFVHQGIVTVGNLKANQNVEAIVKADIREATARNHSATHLLHAAL 577
Query: 636 KKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALD 695
++++G Q GSLVA D LRFDF +P+ +L+++E L+N I + T+++ ++
Sbjct: 578 RQILGSHVQQKGSLVASDILRFDFANDQPVSFEQLQQVELLVNAEIIANTPVTTELLDIE 637
Query: 696 DAKRAGAIAMFGEKYGEQVKISS 718
AK GA+ +FGEKYG++V++ S
Sbjct: 638 AAKAKGAMMLFGEKYGDEVRVLS 660
>gi|423115809|ref|ZP_17103500.1| alanyl-tRNA synthetase [Klebsiella oxytoca 10-5245]
gi|376379754|gb|EHS92504.1| alanyl-tRNA synthetase [Klebsiella oxytoca 10-5245]
Length = 875
Score = 548 bits (1412), Expect = e-153, Method: Compositional matrix adjust.
Identities = 308/687 (44%), Positives = 434/687 (63%), Gaps = 62/687 (9%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTAQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI++AWE T E F LP +
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAIKYAWELLTGENWFALPKEK 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEAF+IW EVGVP E I R+G A DNFW G TGPCGPC+EI++
Sbjct: 128 LWVTVYETDDEAFDIWANEVGVPRERIIRIGDNKGAPFASDNFWQMGDTGPCGPCTEIFF 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGTPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +IK +++ + D +N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRDLIKSVADVTGAT-----DLSNKSLRVIADHIRSCAFLIADGVIP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRA+R G +LG K F + I++ ++K ++
Sbjct: 302 SNENRGYVLRRIIRRAIRHGNMLGAKE--------TFFWKLVAPLIDVMGSAGEELKQQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLQGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQ------AAHNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRARESSGFGADYNAM-IRVDGA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD+L V +L ++GK V V+ G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDSLELNGKVTALFIDGKAVNAVNAGQEAVVILDQTPFYAESGGQVGDKGELKGA 515
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+ Q V D +K G H G + G L+VG V+A VD RQR +++H+ATH
Sbjct: 516 GFSFQ------VSDTQK-YGQAIGHIGKLNGGSLKVGDAVQADVDQARRQRIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G +Q GSLV LRFDF+ + E+ +E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVAQKGSLVNDKALRFDFSHFEAMKPEEIRAVEDLVNAQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKI 716
+M +D A+ +GA+A+FGEKY ++V++
Sbjct: 629 NIMDIDAARESGAMALFGEKYDDRVRV 655
>gi|423016735|ref|ZP_17007456.1| alanyl-tRNA synthetase [Achromobacter xylosoxidans AXX-A]
gi|338780251|gb|EGP44665.1| alanyl-tRNA synthetase [Achromobacter xylosoxidans AXX-A]
Length = 874
Score = 548 bits (1412), Expect = e-153, Method: Compositional matrix adjust.
Identities = 308/682 (45%), Positives = 414/682 (60%), Gaps = 52/682 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR++FL F+ S+GH ++PS+SLVP DPT+L T +GM+QFK +F GK R RA +SQR
Sbjct: 6 IRQQFLQFFKSKGHTIVPSSSLVPGNDPTLLFTNSGMVQFKDVFTGKESRSYTRATSSQR 65
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AIQ+AWE T + LPA++LW
Sbjct: 66 SVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAIQYAWELLTQVYKLPADKLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYYDF 220
++VY++DDEA++IW KEVGVP E I R+G A DNFW TGPCGPCSEI+YD
Sbjct: 126 VTVYQEDDEAYDIWAKEVGVPTERIIRIGDNKGARYASDNFWQMADTGPCGPCSEIFYDH 185
Query: 221 HPD--RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQ 278
P+ G D R+IE +NLVFMQ+ + G++ L + +DTG+GLERIA +LQ
Sbjct: 186 GPEIWGGPPGSPEEDGDRYIEIWNLVFMQFERDAAGNMPRLPRPCVDTGMGLERIAAVLQ 245
Query: 279 KVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNI 338
V +NYE DL +I A+ + D N +LK+I DH+RA +L+ DGV PSN
Sbjct: 246 HVHSNYEIDLFQHLIAAAARETGI-----KDLENNSLKVIADHIRACSFLIVDGVIPSNE 300
Query: 339 GRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRI 398
GRGYV+RR++RRA+R G LG L + + E EL+ A +R+
Sbjct: 301 GRGYVLRRIVRRALRHGYKLGQTKPFFHRLVPDLVAEMGEAYPELA--------ATAERV 352
Query: 399 LEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPR---LSGQDAFLLYDTFGFP 455
+ LK+EE RF +TLE G ++LD LA+ VP+ L G F LYDT+GFP
Sbjct: 353 AQVLKQEEERFGETLEHGMRILDGALAN----------VPKGGQLDGTTLFTLYDTYGFP 402
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGY 515
V++T ++ E V VDM GF++ ME QR Q++AA K++ S + AE T F GY
Sbjct: 403 VDLTADICREREVDVDMAGFEVAMERQRDQARAA-GKFKMAEGLSYEGAE----TRFEGY 457
Query: 516 DTLSAKAI-VESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQ 574
+ L + V +L V+G V +V G V+L+ TPFYAESGGQ+GD G L
Sbjct: 458 EKLELDNVKVTALYVDGTQVQQVQAGQSAVVVLDATPFYAESGGQVGDTGLLEAA----- 512
Query: 575 QTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAA 634
V D K VF H GT+ EG L VG + A VD R R +H+ATHL+ A
Sbjct: 513 -GVRFAVGDTLKIQSGVFGHHGTLEEGKLAVGDTLLARVDAVRRARTVRNHSATHLMHKA 571
Query: 635 LKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMAL 694
L++V+G Q GSLV D+ RFDF PL ++ +E ++N I +VMA
Sbjct: 572 LRQVLGAHVQQRGSLVDPDKTRFDFAQDAPLTAEQIARVEAIVNAEILANQPTVAQVMAY 631
Query: 695 DDAKRAGAIAMFGEKYGEQVKI 716
DDA + GA+A+FGEKYG+ V++
Sbjct: 632 DDAVKGGAMALFGEKYGDTVRV 653
>gi|239986424|ref|ZP_04707088.1| alanyl-tRNA synthetase [Streptomyces roseosporus NRRL 11379]
gi|291443371|ref|ZP_06582761.1| alanyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998]
gi|291346318|gb|EFE73222.1| alanyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998]
Length = 889
Score = 548 bits (1412), Expect = e-153, Method: Compositional matrix adjust.
Identities = 307/678 (45%), Positives = 429/678 (63%), Gaps = 33/678 (4%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQRC 112
IR+R+L F+ RGH +PSASL+ +DPT+LL AGM+ FKP FLG+V PR + Q+C
Sbjct: 6 IRRRWLSFFEERGHTAVPSASLIADDPTLLLVPAGMVPFKPYFLGEVKPPAPRVTSVQKC 65
Query: 113 IRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFST--VE---FGLPANRLW 167
+RT D+E VG+T+RH TFF+M GNFSFGDYFK+ AIQ AWE T VE +GL +LW
Sbjct: 66 VRTPDIEEVGKTTRHGTFFQMCGNFSFGDYFKEGAIQLAWEALTNSVEDGGYGLDPEKLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCS 227
I+VY DDDEA +IW ++GVP E I+R+G DNFW+ G GPCGPCSEI YD P+ G
Sbjct: 126 ITVYLDDDEAEQIWRDKIGVPAERIQRLGKKDNFWSMGVPGPCGPCSEINYDRGPEFGVE 185
Query: 228 DVDLGDDTRFIEFYNLVFMQY------NKKDDGSLEPLKQKNIDTGLGLERIARILQKVP 281
+D R++E +NLVFMQY K+D L L KNIDTGLGLER+A ILQ V
Sbjct: 186 GGPAVNDERYVEIWNLVFMQYERGAGDGKEDFPILGDLPSKNIDTGLGLERLAMILQGVQ 245
Query: 282 NNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRG 341
N YETD + ++ KA+EL V Y N T+++L+++ DH+R V L+ DGV P N GRG
Sbjct: 246 NMYETDTLRVVMDKATELTGVRYGAENG-TDVSLRVVADHIRTSVMLIGDGVTPGNEGRG 304
Query: 342 YVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEE 401
YV+RR++RRA+R RLLG G +L + ++ ++ EL T +RI
Sbjct: 305 YVLRRIMRRAIRNMRLLGATGTVVKDLIDVVIDTMGQQYPELITD--------RKRIETV 356
Query: 402 LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKE 461
EE F++ L+ G +L+ A++ T+ +G L+G AFLL+DT+GFP+++T E
Sbjct: 357 ALAEEAAFLKALKGGTNILET----AVTETKAAGG-KVLAGDKAFLLHDTWGFPIDLTLE 411
Query: 462 VAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLS-VDDSA--DLAEKIPDTEFLGYDTL 518
+A E G+SVD GF M+ QR +++A A K D SA ++A+ TEF GY +L
Sbjct: 412 MAAEQGLSVDEDGFRRLMQEQRDKAKADARAKKTGHADLSAYREVADTAGATEFTGYTSL 471
Query: 519 SAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAV 578
+ ++ + LLV+G P ++G +VEV+L+RTPFYAE GGQ+ D G + + G AV
Sbjct: 472 AGESTIVGLLVDGVPSPAATEGDEVEVVLDRTPFYAEGGGQLADTGRIRLDTG-----AV 526
Query: 579 VEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKV 638
+EV+DV+K + V VHKG ++ G + VG V A +D R+ H+ATHL AL+
Sbjct: 527 IEVRDVQKPVPGVHVHKGVVQVGEVTVGAPVFASIDATRRRAIARAHSATHLTHQALRDA 586
Query: 639 IGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAK 698
+G +QAGS + R RFDF + T L ++E+ IN + +Q +VM++D+AK
Sbjct: 587 LGPTAAQAGSENSPGRFRFDFGSPAAVPGTVLTDVEQRINEVLSRELDVQAEVMSIDEAK 646
Query: 699 RAGAIAMFGEKYGEQVKI 716
+ GAIA FGEKYGE+V++
Sbjct: 647 KQGAIAEFGEKYGERVRV 664
>gi|402839504|ref|ZP_10887991.1| alanine--tRNA ligase [Klebsiella sp. OBRC7]
gi|423104447|ref|ZP_17092149.1| alanyl-tRNA synthetase [Klebsiella oxytoca 10-5242]
gi|376382410|gb|EHS95143.1| alanyl-tRNA synthetase [Klebsiella oxytoca 10-5242]
gi|402287778|gb|EJU36208.1| alanine--tRNA ligase [Klebsiella sp. OBRC7]
Length = 875
Score = 548 bits (1412), Expect = e-153, Method: Compositional matrix adjust.
Identities = 309/689 (44%), Positives = 435/689 (63%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTAQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI++AWE T E F LP +
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAIKYAWELLTGENWFALPKEK 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEAF+IW EVGVP E I R+G A DNFW G TGPCGPC+EI++
Sbjct: 128 LWVTVYETDDEAFDIWANEVGVPRERIIRIGDNKGAPFASDNFWQMGDTGPCGPCTEIFF 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGTPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +IK +++ + D +N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRDLIKSVAKVTGAT-----DLSNKSLRVIADHIRSCAFLIADGVIP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRA+R G +LG K F + I++ ++K ++
Sbjct: 302 SNENRGYVLRRIIRRAIRHGNMLGAKE--------TFFWKLVAPLIDVMGSAGEELKQQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLQGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQ------AAHNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRARESSGFGADYNAM-IRVDGT--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD+L V +L ++GK V V+ G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDSLELNGKVTALFIDGKAVDAVNAGQEAVVILDQTPFYAESGGQVGDKGELKGA 515
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+ Q V D +K G H G + G L+VG V+A VD RQR +++H+ATH
Sbjct: 516 GFSFQ------VSDAQK-YGQAIGHIGKLTSGSLKVGDAVQADVDQARRQRIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G +Q GSLV LRFDF+ + E+ +E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVAQKGSLVNDKALRFDFSHFEAMKPEEIRAVEDLVNAQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M +D A+ +GA+A+FGEKY ++V++ S
Sbjct: 629 NIMDIDAARESGAMALFGEKYDDRVRVLS 657
>gi|440703652|ref|ZP_20884576.1| alanine--tRNA ligase [Streptomyces turgidiscabies Car8]
gi|440274797|gb|ELP63295.1| alanine--tRNA ligase [Streptomyces turgidiscabies Car8]
Length = 890
Score = 548 bits (1411), Expect = e-153, Method: Compositional matrix adjust.
Identities = 292/678 (43%), Positives = 429/678 (63%), Gaps = 33/678 (4%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQRC 112
IR+R+L F+ RGH V+PSASL+ +DPT+LL AGM+ FKP FLG+ PRA + Q+C
Sbjct: 6 IRRRWLSFFEERGHTVVPSASLIADDPTLLLVNAGMVPFKPYFLGETKPPAPRATSVQKC 65
Query: 113 IRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE-----FGLPANRLW 167
+RT D+E VG+T+RH TFF+M GNFSFGDYFK+ AI++AW+ T +GL +LW
Sbjct: 66 VRTPDIEEVGKTTRHGTFFQMCGNFSFGDYFKEGAIKYAWDLLTNSVADGGYGLDPEKLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCS 227
I+VY DDDEA +IW +++GVP E I+R+G DNFW+ G GPCGPCSEI YD P+ G
Sbjct: 126 ITVYLDDDEAEQIWREQIGVPAERIQRLGKKDNFWSMGVPGPCGPCSEINYDRGPEFGVE 185
Query: 228 DVDLGDDTRFIEFYNLVFMQY------NKKDDGSLEPLKQKNIDTGLGLERIARILQKVP 281
+D R++E +NLVFMQY K+D L L +NIDTGLGLER+A ILQ V
Sbjct: 186 GGPAVNDERYVEIWNLVFMQYERGAGDGKEDFPILGDLPSQNIDTGLGLERLAMILQGVQ 245
Query: 282 NNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRG 341
N YETD + ++ KA+EL V Y + ++ ++++++++ DH+R V L+ DGV P N GRG
Sbjct: 246 NMYETDTLRVVMDKATELTGVRYGEKHN-SDVSMRVVADHIRTSVMLIGDGVTPGNEGRG 304
Query: 342 YVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEE 401
YV+RR++RRA+R RL+G G +L + ++ ++ EL T +RI
Sbjct: 305 YVLRRIMRRAIRNMRLMGASGPVVADLVDVVIKTMGQQYPELVTD--------RKRIETV 356
Query: 402 LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKE 461
EE F++ L+ G +LD A++ T+++G LSG AFLL+DT+GFP+++T E
Sbjct: 357 ALAEEAAFLKALKGGTNILDT----AVTETKQAGG-RILSGDKAFLLHDTWGFPIDLTLE 411
Query: 462 VAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSA---DLAEKIPDTEFLGYDTL 518
+A E G+SVD GF M+ QR +++A A K D ++A+ +TEF GYD
Sbjct: 412 MAAEQGLSVDEDGFRRLMKEQRDRAKADAKAKKTGHADMGAYREIADAAGETEFFGYDRT 471
Query: 519 SAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAV 578
++ V +LV+G ++G +VE++L+RTPFYAE GGQIGD G + + G AV
Sbjct: 472 EGESTVVGILVDGVSSPAATEGDEVEIVLDRTPFYAEGGGQIGDTGRIRIDTG-----AV 526
Query: 579 VEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKV 638
+E++D +K + V+VHKG ++ G + VG + +A +D + R+ H+ATHL AL+
Sbjct: 527 IEIRDCQKPVPGVYVHKGVVQVGEVTVGAKAQAAIDVRRRKAIARAHSATHLTHQALRDA 586
Query: 639 IGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAK 698
+G +QAGS R RFDF + + ++E+ IN + + ++++LD+AK
Sbjct: 587 LGPTAAQAGSENQPGRFRFDFGSPSAVPTAVMTDVEQQINEVLARDLDVHAEILSLDEAK 646
Query: 699 RAGAIAMFGEKYGEQVKI 716
+ GAIA FGEKYGE+V++
Sbjct: 647 KQGAIAEFGEKYGERVRV 664
>gi|295677107|ref|YP_003605631.1| alanyl-tRNA synthetase [Burkholderia sp. CCGE1002]
gi|295436950|gb|ADG16120.1| alanyl-tRNA synthetase [Burkholderia sp. CCGE1002]
Length = 874
Score = 548 bits (1411), Expect = e-153, Method: Compositional matrix adjust.
Identities = 300/679 (44%), Positives = 419/679 (61%), Gaps = 44/679 (6%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR++FL F+ S+GH ++ S+SLVP DPT+L T +GM+QFK +FLG R RA T+QR
Sbjct: 6 IREKFLKFFESKGHTIVRSSSLVPGNDPTLLFTNSGMVQFKDVFLGAESRPYSRATTAQR 65
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI +AWE T + LP ++LW
Sbjct: 66 SVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAIHYAWELLTEVYKLPKDKLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYYDF 220
++VY++DDEA +IW KEVGVPVE I R+G A DNFW TGPCGPCSEI+YD
Sbjct: 126 VTVYQEDDEAHDIWAKEVGVPVERIIRIGDNKGARYASDNFWQMADTGPCGPCSEIFYDH 185
Query: 221 HPD--RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQ 278
PD G D R+IE +NLVFMQ+N+ G++ PL ++ +DTG+GLERIA +LQ
Sbjct: 186 GPDVWGGPPGSPEEDGDRYIEIWNLVFMQFNRDAQGNMTPLPKQCVDTGMGLERIAAVLQ 245
Query: 279 KVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNI 338
V +NYE DL +I+ A V+ D TN +LK+I DH+RA +L+ DGV P N
Sbjct: 246 HVHSNYEIDLFQALIQAAGRETGVT-----DLTNNSLKVIADHIRACSFLIVDGVIPGNE 300
Query: 339 GRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRI 398
GRGYV+RR++RRA+R G LG KG L + + + EL+ E+R+
Sbjct: 301 GRGYVLRRIVRRAIRHGYKLGKKGSFFHRLVADLVAQMGDAYPELAQ--------AEKRV 352
Query: 399 LEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEI 458
+ L++EE RF +T+E G +L+ LAD ++ ++ L G+ AF L+DT+GFP+++
Sbjct: 353 TDVLRQEEERFFETIEHGMSILEAALADLDAKGGKT-----LDGELAFKLHDTYGFPLDL 407
Query: 459 TKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTL 518
T +V E V+VD FD M QR Q++AA K+ + L T F GY+ +
Sbjct: 408 TADVCREREVTVDEPAFDDAMARQREQARAA-GKFKM----AQGLEYSGAKTTFHGYEEI 462
Query: 519 S-AKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTA 577
A V +L V+G V +V G V+L+ TPFYAESGGQ+GD G L N T
Sbjct: 463 VFDDAKVVALYVDGASVQQVQAGQPAVVVLDHTPFYAESGGQVGDQGVL-----ANASTR 517
Query: 578 VVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKK 637
V D K V H GT+ +G L+VG V+A +D R R +H+ATHL+ AL++
Sbjct: 518 FA-VADTLKVQADVVGHHGTLEQGTLKVGDVVKAEIDAVRRARTARNHSATHLMHKALRE 576
Query: 638 VIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDA 697
V+G Q GSLV D+ RFDF + P+ D ++ +E ++N + ++M+ DDA
Sbjct: 577 VLGSHVQQKGSLVDADKTRFDFAHNAPMTDEQIRRVEEIVNAEVLANAPGIVRLMSYDDA 636
Query: 698 KRAGAIAMFGEKYGEQVKI 716
+ GA+A+FGEKYG++V++
Sbjct: 637 VKGGAMALFGEKYGDEVRV 655
>gi|262043942|ref|ZP_06017027.1| alanine-tRNA ligase [Klebsiella pneumoniae subsp. rhinoscleromatis
ATCC 13884]
gi|259038706|gb|EEW39892.1| alanine-tRNA ligase [Klebsiella pneumoniae subsp. rhinoscleromatis
ATCC 13884]
Length = 875
Score = 548 bits (1411), Expect = e-153, Method: Compositional matrix adjust.
Identities = 307/687 (44%), Positives = 435/687 (63%), Gaps = 62/687 (9%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTAQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI++AWE T E F LP +
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAIKYAWELLTGENWFALPKEK 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEAF+IW EVGVP E I R+G A DNFW G TGPCGPC+EI++
Sbjct: 128 LWVTVYETDDEAFDIWANEVGVPRERIIRIGDNKGAPFASDNFWQMGDTGPCGPCTEIFF 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGNMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +I +++ + D TN +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRDLIASVAKVTGAT-----DLTNKSLRVIADHIRSCAFLVADGVIP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRA+R G +LG K F + I++ ++K ++
Sbjct: 302 SNENRGYVLRRIIRRAIRHGNMLGAKD--------TFFWKLVAPLIDVMGSAGDELKQQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ L+ T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELSKLKGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQ------AAHNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRARESSGFGADYNAM-IRVDGA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD L V +L ++GK V VS G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDHLELNGKVTALFIDGKAVDSVSAGQEAVVILDQTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G AV + + +++G H G + G L+VG V+A VD RQR +++H+ATH
Sbjct: 513 KGAGFSFAVSDTQKYGQAIG----HIGKVASGSLKVGDAVQADVDEARRQRIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G +Q GSLV LRFDF+ + E+ +E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVAQKGSLVNDKALRFDFSHFEAMKPEEIRAVEDLVNAQIRRNLAIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKI 716
+M +D A+ +GA+A+FGEKY ++V++
Sbjct: 629 NIMDIDAARASGAMALFGEKYDDRVRV 655
>gi|400287934|ref|ZP_10789966.1| alanyl-tRNA ligase [Psychrobacter sp. PAMC 21119]
Length = 890
Score = 548 bits (1411), Expect = e-153, Method: Compositional matrix adjust.
Identities = 298/691 (43%), Positives = 431/691 (62%), Gaps = 50/691 (7%)
Query: 43 SQDFPSSGDSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPR 101
SQ F S+ IR+ F+DF+ S+ H + S+SL+P DPT+L T AGM QFK FLG PR
Sbjct: 2 SQPFRSA--DIRQAFIDFFISKQHTPVSSSSLIPHNDPTLLFTNAGMNQFKETFLGMEPR 59
Query: 102 QVPRAATSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTV 157
RA TSQ+C+R ND++NVG T+RHHTFFEMLGNFSFGDYFK+ I++ WEF T
Sbjct: 60 DYTRAVTSQKCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKQAGIEYIWEFLTS 119
Query: 158 E--FGLPANRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATG 208
+ + +RL++++YE DDEAF+IWNK +G+P E I R+G A DNFW G TG
Sbjct: 120 DKWLAIDKDRLYVTIYETDDEAFDIWNKNIGIPSERIIRIGDNKGAPYASDNFWTMGDTG 179
Query: 209 PCGPCSEIYYDFHPD--RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDT 266
PCGPC+E++YD D G D R+IE +N VFMQ+N++ DG+L PL ++DT
Sbjct: 180 PCGPCTEVFYDHGADIEGGLPGTPEEDGDRYIEIWNCVFMQFNRQKDGTLLPLPAPSVDT 239
Query: 267 GLGLERIARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIV 326
G+GLERI+ I+Q V NYE DL ++ A+E+ + Q + +LK+I DH+RA+
Sbjct: 240 GMGLERISAIMQGVHGNYEIDLFTHLMDAAAEILEIDNEQQS-----SLKVIADHIRAVS 294
Query: 327 YLLSDGVFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTH 386
+L++DGV PSN GRGYV+RR+IRRAVR G LG D + P +AE I
Sbjct: 295 FLIADGVMPSNEGRGYVLRRVIRRAVRHGNKLGADSDFFYKM---VAPLVAEMGIAYP-- 349
Query: 387 IDSDVKAREQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAF 446
++K ++ I +++EE +F +TL +G +LL A L ++ + LSG+ AF
Sbjct: 350 ---ELKDKQSVIENAIQKEEAQFAKTLAQGLRLL----ASELEGLKDGDT---LSGEAAF 399
Query: 447 LLYDTFGFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEK 506
LYDT+GFP+++T ++ E G+++D FD M+ QR + A +A K VD S+ + +
Sbjct: 400 KLYDTYGFPLDLTADITRERGIAIDEAEFDEHMQAQRER---ARDAGKFDVDYSSVIQVE 456
Query: 507 IPDTEFLGYDTLSAKA-IVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGF 565
P T F+GY+ L IV++L +G P +++G + V+L+RTPFYAE GGQ+G+ G
Sbjct: 457 TP-TTFIGYEQLEEDGVIVDALYQDGNPADSLTEGMEGVVVLDRTPFYAEGGGQVGELGE 515
Query: 566 LYVTQGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHH 625
+ G V EV+D KKS G +H G + G + + EA V +R + +H
Sbjct: 516 IRTASG------VFEVQDTKKS-GQAIIHYGVVTMGDISTKQTAEAQVLSSIRAASAKNH 568
Query: 626 TATHLLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDAN 685
+ATHLL AAL++V+G +Q GSLV+ + LRFDF++ +P+ E+ IERL+N I
Sbjct: 569 SATHLLHAALREVLGDAVTQKGSLVSSEVLRFDFSYDKPVSTAEISRIERLVNEQIQANT 628
Query: 686 LLQTKVMALDDAKRAGAIAMFGEKYGEQVKI 716
+ + M++DDA + GA+A+FGEKYG V++
Sbjct: 629 PARIENMSIDDAMKNGAMALFGEKYGSDVRV 659
>gi|238896148|ref|YP_002920884.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
gi|365140022|ref|ZP_09346142.1| alanyl-tRNA synthetase [Klebsiella sp. 4_1_44FAA]
gi|386036156|ref|YP_005956069.1| alanyl-tRNA synthetase [Klebsiella pneumoniae KCTC 2242]
gi|402779351|ref|YP_006634897.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
1084]
gi|424831999|ref|ZP_18256727.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
Ecl8]
gi|425075304|ref|ZP_18478407.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
WGLW1]
gi|425085940|ref|ZP_18489033.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
WGLW3]
gi|449059589|ref|ZP_21737281.1| alanyl-tRNA ligase [Klebsiella pneumoniae hvKP1]
gi|238548466|dbj|BAH64817.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
gi|339763284|gb|AEJ99504.1| alanyl-tRNA synthetase [Klebsiella pneumoniae KCTC 2242]
gi|363653897|gb|EHL92841.1| alanyl-tRNA synthetase [Klebsiella sp. 4_1_44FAA]
gi|402540292|gb|AFQ64441.1| Alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
1084]
gi|405595507|gb|EKB68897.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
WGLW1]
gi|405606449|gb|EKB79441.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
WGLW3]
gi|414709438|emb|CCN31142.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
Ecl8]
gi|448874714|gb|EMB09749.1| alanyl-tRNA ligase [Klebsiella pneumoniae hvKP1]
Length = 875
Score = 548 bits (1411), Expect = e-153, Method: Compositional matrix adjust.
Identities = 307/687 (44%), Positives = 435/687 (63%), Gaps = 62/687 (9%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTAQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI++AWE T E F LP +
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAIKYAWELLTGENWFALPKEK 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEAF+IW EVGVP E I R+G A DNFW G TGPCGPC+EI++
Sbjct: 128 LWVTVYETDDEAFDIWANEVGVPRERIIRIGDNKGAPFASDNFWQMGDTGPCGPCTEIFF 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +I +++ + D TN +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRDLIASVAKVTGAT-----DLTNKSLRVIADHIRSCAFLVADGVIP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRA+R G +LG K F + I++ ++K ++
Sbjct: 302 SNENRGYVLRRIIRRAIRHGNMLGAKD--------TFFWKLVAPLIDVMGSAGDELKQQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ L+ T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELSKLKGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQ------AAHNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRARESSGFGADYNAM-IRVDGA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD L V +L ++GK V VS G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDHLELNGKVTALFIDGKAVDSVSAGQEAVVILDQTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G AV + + +++G H G + G L+VG V+A VD RQR +++H+ATH
Sbjct: 513 KGAGFSFAVSDTQKYGQAIG----HIGKVASGSLKVGDAVQADVDEARRQRIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G +Q GSLV LRFDF+ + E+ +E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVAQKGSLVNDKALRFDFSHFEAMKPEEIRAVEDLVNAQIRRNLAIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKI 716
+M +D A+ +GA+A+FGEKY ++V++
Sbjct: 629 NIMDIDAARASGAMALFGEKYDDRVRV 655
>gi|262372182|ref|ZP_06065461.1| alanyl-tRNA synthetase [Acinetobacter junii SH205]
gi|262312207|gb|EEY93292.1| alanyl-tRNA synthetase [Acinetobacter junii SH205]
Length = 884
Score = 548 bits (1411), Expect = e-153, Method: Compositional matrix adjust.
Identities = 300/693 (43%), Positives = 429/693 (61%), Gaps = 51/693 (7%)
Query: 43 SQDFPSSGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPR 101
S F +S + IR+ FL ++ S+GH + S+SLVP DPT+L T AGM QFK FLG R
Sbjct: 4 STRFMTSAE-IREAFLRYFESQGHTRVASSSLVPANDPTLLFTNAGMNQFKDCFLGLEKR 62
Query: 102 QVPRAATSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTV 157
RA +SQ+C+R ND++NVG T+RHHTFFEMLGNFSFGDYFK++A+++AW+F T
Sbjct: 63 DYVRAVSSQKCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKRDALKFAWDFLTN 122
Query: 158 E--FGLPANRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATG 208
E LP +RL+++VY DDEAF+IWNKE+G+ I R+G A DNFW G TG
Sbjct: 123 EQWLALPKDRLYVTVYHTDDEAFDIWNKEIGLDASRIIRIGDNKGGQYASDNFWAMGDTG 182
Query: 209 PCGPCSEIYYDFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNID 265
PCGPCSEI+YD H D G D RFIE +N VFMQ+N+ DG + PL ++D
Sbjct: 183 PCGPCSEIFYD-HGDHIWGGLPGSPEEDGDRFIEIWNNVFMQFNRTADGVMHPLPAPSVD 241
Query: 266 TGLGLERIARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAI 325
TG+GLERI+ +LQ V +NYE DL ++K A+ + + D +L+++ DH R+
Sbjct: 242 TGMGLERISAVLQHVNSNYEIDLFQHLLKAAANIIGI-----QDEGQPSLRVLADHARSC 296
Query: 326 VYLLSDGVFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELST 385
+L++DGV PSN GRGYV+RR+IRRAVR G LG G F + + +E+
Sbjct: 297 CFLIADGVNPSNEGRGYVLRRIIRRAVRHGNKLGATG--------TFFYKMLQPLVEVMG 348
Query: 386 HIDSDVKAREQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDA 445
++ +R+ I L REE +F +TLE+G KLL+ LA + G
Sbjct: 349 EAYPELASRKDVIEATLLREEEQFAKTLEQGLKLLEAELAQLKDTV--------IPGATV 400
Query: 446 FLLYDTFGFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAE 505
F LYDT+GFP ++T ++A E G ++D GF++EM QR Q A +A K +VD ++ + +
Sbjct: 401 FKLYDTYGFPTDLTADIARERGFTIDETGFEVEMAAQR---QRARDAGKFAVDYNS-IVK 456
Query: 506 KIPDTEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGF 565
+T+F GYD + + ++ +G V ++++G + ++LN+TPFYAESGGQIGD G
Sbjct: 457 VEGETQFDGYDATQGQGQIVAIYKDGTQVDEINEGDEALIVLNQTPFYAESGGQIGDTGI 516
Query: 566 LYVTQGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHH 625
T + EV+D KKS G FVH+G + G L+ + VEA V +R +H
Sbjct: 517 F------KNDTGIFEVQDTKKS-GGAFVHQGIVTMGSLKATQNVEATVKADIRAATARNH 569
Query: 626 TATHLLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDAN 685
+ATHLL AAL++++G Q GSLVA D LRFDF +P+ +L++IERL+N +
Sbjct: 570 SATHLLHAALRQILGDHVQQKGSLVASDILRFDFANDQPVTFEQLQQIERLVNAEVIANT 629
Query: 686 LLQTKVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+ T+++ ++ AK GA+ +FGEKYGE+V++ S
Sbjct: 630 PVTTELLDIESAKAKGAMMLFGEKYGEEVRVLS 662
>gi|322831421|ref|YP_004211448.1| alanyl-tRNA synthetase [Rahnella sp. Y9602]
gi|321166622|gb|ADW72321.1| alanyl-tRNA synthetase [Rahnella sp. Y9602]
Length = 875
Score = 548 bits (1411), Expect = e-153, Method: Compositional matrix adjust.
Identities = 312/686 (45%), Positives = 430/686 (62%), Gaps = 56/686 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH ++ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHNIVSSSSLVPTNDPTLLFTNAGMNQFKDVFLGLDKRDYNRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AI +AWE T E F LP +
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAINYAWELLTGENWFNLPKEK 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEAFEIW KEVGVP E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYETDDEAFEIWEKEVGVPKERIIRIGDNKGGAFASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR------GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLER 272
D H D G ++ D GD R+IE +NLVFMQ+N++ DG++ PL + ++DTG+GLER
Sbjct: 188 D-HGDHIWGGPPGSAEED-GD--RYIEIWNLVFMQFNRQADGTMLPLPKPSVDTGMGLER 243
Query: 273 IARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDG 332
I ++Q V +NY+ DL +I +E+ + D +N +L++I DH+R+ +L++DG
Sbjct: 244 ITAVMQHVNSNYDIDLFQKLIAAVAEVTGAT-----DLSNKSLRVIADHIRSCAFLIADG 298
Query: 333 VFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVK 392
V PSN RGYV+RR+IRRA+R G +LG + F + IE+ +++K
Sbjct: 299 VIPSNENRGYVLRRIIRRAIRHGNMLGA--------QDTFFYKLVAPLIEVMGPAATELK 350
Query: 393 AREQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTF 452
++ + + LK EE +F +TLERG LLD+ LA T L G+ AF LYDTF
Sbjct: 351 EQQAMVEQLLKTEEEQFARTLERGLALLDEELAALKGDT--------LDGEIAFRLYDTF 402
Query: 453 GFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEF 512
GFP+++T +V E + VD GF+ M+ QRR+ A + S D ++ + T+F
Sbjct: 403 GFPLDLTADVCRERNLKVDEAGFEKAMDVQRRR---ARESSGFSADYNS-MVRVDGVTQF 458
Query: 513 LGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGT 572
GY+ L + V +L V+G+PV + G + V+L+ TPFY ESGGQ+GD G L T
Sbjct: 459 SGYEHLQRHSKVVALFVDGQPVNDIQAGVNAIVVLDDTPFYGESGGQVGDKGILKTT--- 515
Query: 573 NQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQ 632
T V V D +K G H+G + G L +G VEA VD R R +++H+ATHLL
Sbjct: 516 ---TGVFSVSDTQK-YGKAIGHQGALSAGKLSIGDSVEAEVDVARRDRIRLNHSATHLLH 571
Query: 633 AALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVM 692
AAL++V+G+ +Q GSLV + LRFDF+ + E+ ++E L+N I +QT +M
Sbjct: 572 AALRQVLGKHVAQKGSLVNDNYLRFDFSHFEAMKPEEIRQVEDLVNAQIRRNLPIQTTIM 631
Query: 693 ALDDAKRAGAIAMFGEKYGEQVKISS 718
LD+AK GA+A+FGEKY + V++ S
Sbjct: 632 DLDEAKEKGAMALFGEKYEDSVRVLS 657
>gi|254487494|ref|ZP_05100699.1| alanyl-tRNA synthetase [Roseobacter sp. GAI101]
gi|214044363|gb|EEB85001.1| alanyl-tRNA synthetase [Roseobacter sp. GAI101]
Length = 885
Score = 548 bits (1411), Expect = e-153, Method: Compositional matrix adjust.
Identities = 297/678 (43%), Positives = 415/678 (61%), Gaps = 36/678 (5%)
Query: 51 DSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATS 109
+ IR FL ++ GH V PS+ LVP DPT++ +GM+QFK +F G R RA T+
Sbjct: 5 NDIRSTFLGYFERHGHSVQPSSPLVPRNDPTLMFANSGMVQFKNLFTGVETRDYKRATTA 64
Query: 110 QRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANR 165
Q+C+R ND++NVG T+RHHTFFEMLGNFSFGDYFK EAI ++WE T EFG+ R
Sbjct: 65 QKCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKAEAIAFSWELITKEFGIDPKR 124
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDR- 224
L+++VY DDEA +IW K G+P E I R+ DDNFW G TGPCGPCSEI+YD H D
Sbjct: 125 LYVTVYHTDDEAADIWKKVAGLPDERIIRIATDDNFWMMGPTGPCGPCSEIFYD-HGDHI 183
Query: 225 --GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPN 282
G D RF+E +NLVFMQY + DG+ +PL ++IDTG+G+ER+A +LQ +
Sbjct: 184 WGGPPGSPEEDGDRFVEIWNLVFMQYEQFPDGTRKPLPNQSIDTGMGIERVAALLQGTND 243
Query: 283 NYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGY 342
NY TDL+ +I + AN S + + ++I DHLR+ +L++DGV PSN GRGY
Sbjct: 244 NYATDLMRNLILAS---ANASNTDPDGPGKTHHRVIADHLRSTSFLIADGVMPSNDGRGY 300
Query: 343 VVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEEL 402
V+RR++RRA+R LLGI+ L + + EL + I E L
Sbjct: 301 VLRRIMRRAMRHAHLLGIQDPLMHRLVPELVRQMGGAYPELGQ--------AQSLITETL 352
Query: 403 KREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEV 462
EE RF +TL+RG KLLD D L E + LSG+ AF LYDT+GFPV++T++
Sbjct: 353 LLEETRFKKTLDRGLKLLD----DELKGLPEGAN---LSGEAAFKLYDTYGFPVDLTQDA 405
Query: 463 AEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSA--DLAEKIPDTEFLGYDTLSA 520
E SVD++GF ME Q+ ++AA + + D + D+AE T+FLGYDT +A
Sbjct: 406 LREQDRSVDLEGFSAAMEKQKALARAAWSGSGEAADATVWFDVAENAGTTDFLGYDTETA 465
Query: 521 KAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVE 580
+ + +L+ +G V G V++ LN+TPFYAESGGQ+GD G + +T V
Sbjct: 466 EGQIVALIQDGAQVDAAKTGDKVQIALNQTPFYAESGGQVGDTGLI------KTETGSVT 519
Query: 581 VKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIG 640
V D +K+ G VF+H G + EG + G+ VD R + +H+ATHLL AL+ +G
Sbjct: 520 VTDTRKTAG-VFIHFGDVTEGTITTGQAAVLDVDHARRTSIRANHSATHLLHEALRNALG 578
Query: 641 QETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRA 700
+Q GSL A DRLRFD++ + P+ EL ++E+ +N +I ++T++M DDA+
Sbjct: 579 DHVAQRGSLNAADRLRFDYSHNSPMSAEELAQVEQEVNTYIRQNAPVETRIMTPDDARGL 638
Query: 701 GAIAMFGEKYGEQVKISS 718
GA A+FGEKYG++V++ S
Sbjct: 639 GAQALFGEKYGDEVRVVS 656
>gi|387129200|ref|YP_006292090.1| alanyl-tRNA synthetase [Methylophaga sp. JAM7]
gi|386270489|gb|AFJ01403.1| Alanyl-tRNA synthetase [Methylophaga sp. JAM7]
Length = 867
Score = 548 bits (1411), Expect = e-153, Method: Compositional matrix adjust.
Identities = 302/676 (44%), Positives = 435/676 (64%), Gaps = 45/676 (6%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLD++A +GH+V+ S+ LVP DPT+L T AGM+QFK +FLG R++PRA ++QR
Sbjct: 7 IRQLFLDYFAGKGHEVVESSPLVPANDPTLLFTNAGMVQFKDVFLGNESRKIPRATSTQR 66
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK+EAIQ+AWEF TV LP +LW
Sbjct: 67 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKREAIQYAWEFLTVSLALPPEKLW 126
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPD--RG 225
++V+E+D+EA +IW EVG+ + R+GA DNFW+ G TGPCGPCSEI+YD + G
Sbjct: 127 VTVFEEDEEAADIWLNEVGISADRFSRIGAKDNFWSMGDTGPCGPCSEIFYDHGEEVAGG 186
Query: 226 CSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYE 285
D R+IE +NLVFMQ+++ DG+L PL + ++DTG+GLER+A +LQ NNY+
Sbjct: 187 PPGSPEEDGDRYIEIWNLVFMQFDRSADGTLTPLPKPSVDTGMGLERLAAVLQGKHNNYD 246
Query: 286 TDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVR 345
DL +I +LA + +D T+ + ++I DH+R+ ++++DGV PSN GRGYV+R
Sbjct: 247 IDLFQNLITAIVQLAGI-----DDTTHTSARVIADHIRSCAFMITDGVQPSNEGRGYVLR 301
Query: 346 RLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEE-LKR 404
R+IRRA+R G LG+K + F +A E+ VKA Q ++E L
Sbjct: 302 RIIRRAIRHGHKLGLK-------QAFFHKLVAPLVNEMGDAFPELVKA--QPLVERALAL 352
Query: 405 EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAE 464
EE RF TL+ G K+LDQ + DA++ + G+ FLLYDT+GFP+++T ++A
Sbjct: 353 EEERFADTLDNGLKILDQAI-DAMAD-------KEIPGETVFLLYDTYGFPIDLTADIAR 404
Query: 465 EHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTE--FLGYDTLSAKA 522
E +++D+ GF+ ME QR + A NA + + S +L I D E F GYD +A
Sbjct: 405 ERNLTIDIAGFERHMEAQRNR---ARNASQFAGGLSENL---IIDGETVFCGYDHTRQEA 458
Query: 523 IVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVK 582
+ +LLV+G+ V + G ++L+ TPFYAESGGQ+GD G + N A V
Sbjct: 459 TIMALLVDGENVNTLEAGQTGIIVLDHTPFYAESGGQVGDKGEI------NSAGAHFSVM 512
Query: 583 DVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQE 642
D +K G F H G + G E+G+++ A VD RQ ++H+ATHLL AAL++V+G
Sbjct: 513 DTRKQ-GKAFAHMGECKHGQFEIGQQIIAHVDESNRQATALNHSATHLLHAALRQVLGDH 571
Query: 643 TSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGA 702
+Q GSLV RLRFDF+ + + ++ EIERL+N I + ++T++M L+ A+ GA
Sbjct: 572 VNQKGSLVNAQRLRFDFSHYEAVSAEQVREIERLVNQQIRINHTVETRLMPLEKARDCGA 631
Query: 703 IAMFGEKYGEQVKISS 718
+A+FGEKY ++V++ S
Sbjct: 632 MALFGEKYDDEVRVLS 647
>gi|317154429|ref|YP_004122477.1| alanyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
gi|316944680|gb|ADU63731.1| alanyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
Length = 879
Score = 548 bits (1411), Expect = e-153, Method: Compositional matrix adjust.
Identities = 303/679 (44%), Positives = 428/679 (63%), Gaps = 39/679 (5%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+RFL+++ H ++ S+ L+P +DPT+L T AGM+QFK +FLG+ R+ RA TSQ+
Sbjct: 6 IRQRFLEYFQENNHAIVESSPLIPKDDPTLLFTNAGMVQFKRLFLGQEKREYSRATTSQK 65
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
C+R ND+ENVGRT+RHHTFFEMLGNFSFGDYFK++AI++ W+F T E LP +RL+
Sbjct: 66 CLRVGGKHNDLENVGRTARHHTFFEMLGNFSFGDYFKEDAIRYCWQFLTEELKLPKDRLY 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCS 227
I++Y+DDDEA E+W K GVP+E I R+G DNFW+ G TGPCGPCSE+++D GC
Sbjct: 126 ITIYKDDDEAGELWQKVAGVPIERIYRLGEKDNFWSMGDTGPCGPCSEVHFDQGEHVGCG 185
Query: 228 -DVDLG--DDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNY 284
+ +G D R++E +NLVFMQY++ +DG+ PL + +IDTG+GLERIA + Q V +NY
Sbjct: 186 PECGIGKCDCDRYLEIWNLVFMQYDQAEDGTRTPLPRPSIDTGMGLERIAAVCQGVASNY 245
Query: 285 ETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVV 344
ETDL II+ +ELA V Y + N + L++I DH RAI +L+ D V PSN GRGY++
Sbjct: 246 ETDLFQSIIRYTAELAGVKY-RENQEIDTALQVIADHSRAIAFLIPDQVLPSNEGRGYIL 304
Query: 345 RRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAI-ELSTHIDSDVKAREQRILEELK 403
RRLIRRA R G+L+G L FL A K + ++ H S+++ ++ ++E ++
Sbjct: 305 RRLIRRACRFGKLMG--------LTEPFLWKTASKVVDDMGGHF-SELRDSKEFMIEVVR 355
Query: 404 REELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVA 463
EE F +TL++G +L+ LA+ + ++ VP G AF LYDT+GFP++I ++VA
Sbjct: 356 GEEEGFAKTLDKGLDMLEAELAELTA--AKAAIVP---GDTAFRLYDTYGFPIDIVRDVA 410
Query: 464 EEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSA-----DLAEKIPDTEFLGYDTL 518
E G+SVD GFD M+ Q+ +S+AA K S D L E+ + F GY+T+
Sbjct: 411 ERQGMSVDEPGFDALMQEQKSRSKAAW---KGSGDKDVAAVFHTLLEQGITSGFTGYETM 467
Query: 519 SAKA-IVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTA 577
+ ++ I L G V +++ G V+ TPFY ESGGQ GD G + + G
Sbjct: 468 ADQSEITHVLSPAGAVVERLAAGDTGWVVTRSTPFYGESGGQTGDTGEIAASSGRGA--- 524
Query: 578 VVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKK 637
V D K S+ HK + +G L+ G V VD R +HT THLL AAL+K
Sbjct: 525 ---VTDTVKPSQSLTAHKVEMAQGELKPGNSVFLTVDRGQRLATMRNHTVTHLLHAALQK 581
Query: 638 VIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDA 697
V+G QAGSLV DRLRFDF + L E+ +E L+N I DA + +VM+++ A
Sbjct: 582 VLGDHARQAGSLVGPDRLRFDFTHIKGLTVEEIGRVETLVNQSILDAIPVSREVMSIEQA 641
Query: 698 KRAGAIAMFGEKYGEQVKI 716
+ GA A+FGEKYG+ V +
Sbjct: 642 QTKGATALFGEKYGDTVSV 660
>gi|114320637|ref|YP_742320.1| alanyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1]
gi|122311690|sp|Q0A8K7.1|SYA_ALHEH RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|114227031|gb|ABI56830.1| alanyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1]
Length = 869
Score = 548 bits (1411), Expect = e-153, Method: Compositional matrix adjust.
Identities = 307/675 (45%), Positives = 415/675 (61%), Gaps = 37/675 (5%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S IR FL+F+ RGH V+PS+ LVP DPT+L T AGM+ FK +FLGK R RA
Sbjct: 3 SSAEIRNAFLEFFEHRGHTVVPSSPLVPANDPTLLFTNAGMVPFKDVFLGKEQRGYTRAC 62
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
+SQRC+R ND++NVG T+RHHTFFEMLGNFSFGDYFK+EAI++AWEF T GLPA
Sbjct: 63 SSQRCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKREAIEYAWEFLTRTIGLPA 122
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDF--H 221
RLW++VYE+DDEA +IW E+GV E R+GA DNFW+ G TGPCGPCSEI+YD
Sbjct: 123 ERLWVTVYEEDDEAADIWLNEIGVDPERFGRIGAADNFWSMGDTGPCGPCSEIFYDHGPE 182
Query: 222 PDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVP 281
G D R++E +NLVFMQY++ +G L PL +DTG+GLER+A ++Q V
Sbjct: 183 VPGGPPGSPEEDGDRYVEIWNLVFMQYDRDAEGRLAPLPMPCVDTGMGLERLAAVVQGVH 242
Query: 282 NNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRG 341
+N+E DL +I A+ D N +LK+I DH+RA +L++DGV P+N GRG
Sbjct: 243 SNFEIDLFRRLIGAAA----ALAGLPEDSDNASLKVIADHIRACAFLITDGVVPANDGRG 298
Query: 342 YVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEE 401
YV+RR+IRRAVR G LGI E F + A E+ ++ R+ +
Sbjct: 299 YVLRRIIRRAVRHGYKLGID-------EPFFHRLVQPLADEMGGAF-PELPERQALVERL 350
Query: 402 LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKE 461
L +EE RF +TLE+G KLL++ L R +P G+ F L DT+GFPV++T +
Sbjct: 351 LLQEEQRFRETLEQGLKLLEEDL-----RQLTGAEIP---GETVFKLADTYGFPVDLTAD 402
Query: 462 VAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTLSAK 521
+A E +++DM GF+ M QR +++ AH+ K+ + ++ F+GYD L
Sbjct: 403 IARERDLTLDMAGFEACMAAQRERAR-AHSQFKVQHGEGEQFE---GESHFIGYDQLEGH 458
Query: 522 AIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEV 581
V +L +G+ V +S G + V+L++TPFYAESGGQ+GD G L G V EV
Sbjct: 459 GEVLALFRDGRSVQTLSAGEEGMVILDQTPFYAESGGQVGDQGVLETAGGE-----VFEV 513
Query: 582 KDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQ 641
+D K G H G +REG + VG + A VD + R ++H+ATHLL AAL+ V+G
Sbjct: 514 RDTLKQ-GEGHGHLGRLREGRIHVGDRLRAQVDAETRWATALNHSATHLLHAALRGVLGT 572
Query: 642 ETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAG 701
Q GSLVA DRLRFDF + +LE+IER++N I + MA DDA G
Sbjct: 573 HVQQKGSLVAPDRLRFDFAHYEAPSTEQLEQIERIVNDEIRANRAADIEHMAYDDAIETG 632
Query: 702 AIAMFGEKYGEQVKI 716
A+A+FGEKYG+QV++
Sbjct: 633 AMALFGEKYGDQVRV 647
>gi|386811056|ref|ZP_10098282.1| alanyl-tRNA synthase [planctomycete KSU-1]
gi|386405780|dbj|GAB61163.1| alanyl-tRNA synthase [planctomycete KSU-1]
Length = 886
Score = 547 bits (1410), Expect = e-153, Method: Compositional matrix adjust.
Identities = 295/679 (43%), Positives = 425/679 (62%), Gaps = 36/679 (5%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR +FL+F+ + H VLPS SLVP+ DPT+L T AGM QFK +FLGK V +AAT Q+
Sbjct: 6 IRSKFLNFFEKKSHAVLPSDSLVPQNDPTLLFTGAGMNQFKDMFLGKGNLNVKKAATCQK 65
Query: 112 CIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWISVY 171
C+RT D++NVG+T+ HHTFFEMLGNFSFGDYFK++ I+WAWEF E + RL +SVY
Sbjct: 66 CLRTGDIDNVGKTASHHTFFEMLGNFSFGDYFKQKTIEWAWEFLVQELKISEERLSVSVY 125
Query: 172 EDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNS-----GATGPCGPCSEIYYDFHPDRGC 226
+DD E++EIW K + +P I R DNFW + G GPCGPCSEI++D GC
Sbjct: 126 KDDHESYEIWEKHIHIPKSRIYRYDQKDNFWPANAPLLGPNGPCGPCSEIFFDQGEKIGC 185
Query: 227 SDVDL---GDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNN 283
+ + RF+E +NLVF +Y++K+ G LEPL +N+DTG+GLER+AR++Q V N
Sbjct: 186 GRKECDPACECDRFVEIWNLVFTEYDRKEGGKLEPLPHQNVDTGMGLERMARVMQGVQTN 245
Query: 284 YETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYV 343
++ D+ PII E+A V Y + L ++ I DH++A V+ +SDGV P N GRGYV
Sbjct: 246 FDIDIFRPIISSIEEIAQVKYNGRVENAIL-MRRIADHVKACVFCISDGVLPGNEGRGYV 304
Query: 344 VRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELK 403
RRL+RRA+R G LG+K +FL + + D+K R + I +K
Sbjct: 305 ERRLLRRAIRDGTQLGVK--------DSFLYKLVPIVSNVMQDYYPDIKQRRENIARIIK 356
Query: 404 REELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVA 463
EE +F +TLE+G ++L++++ T + LSG++AF LYDT+GFP+++T+ +
Sbjct: 357 NEEEKFHETLEQGTRILEELM-----ETLHKSNQKTLSGKEAFKLYDTYGFPLDMTEAIL 411
Query: 464 EEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPD----TEFLGYDTLS 519
E G VD GF+ E++ QR Q++ A V D+ L+ KI D ++FLGY+ +
Sbjct: 412 NEKGFVVDRNGFEDELQKQRLQARTASQMTG-QVFDTGPLS-KIKDISKGSKFLGYNQNT 469
Query: 520 AKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVV 579
+ + +++ N + V GS+V V+L++TPFY ESGGQIGD G L + GT ++
Sbjct: 470 CQGKIIAIIRNNELVDVAIVGSEVTVILDQTPFYGESGGQIGDTGILE-SDGT-----LI 523
Query: 580 EVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVI 639
+V D +++ +H G + +G L+ G VEA VD + R + +H+ATH+L AL++VI
Sbjct: 524 QVTDTRRN-DDFTLHTGKVIKGELKTGIVVEAKVDVQRRNDIRKNHSATHILHYALRRVI 582
Query: 640 GQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKR 699
GQ QAGSLVA DR+RFDF+ L E+ IE L+N I + + K + + AK
Sbjct: 583 GQHAEQAGSLVAPDRIRFDFHHFSALTKEEITRIEDLVNEKILENVPVSAKELTIQQAKN 642
Query: 700 AGAIAMFGEKYGEQVKISS 718
AGA+A+FGEKYGE V++ S
Sbjct: 643 AGALALFGEKYGELVRMLS 661
>gi|383650336|ref|ZP_09960742.1| alanyl-tRNA synthetase [Streptomyces chartreusis NRRL 12338]
Length = 890
Score = 547 bits (1410), Expect = e-153, Method: Compositional matrix adjust.
Identities = 296/678 (43%), Positives = 421/678 (62%), Gaps = 33/678 (4%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQRC 112
IR+R+L F+ RGH V+PSASL+ +DPT+LL AGM+ FKP FLG+V RA + Q+C
Sbjct: 6 IRRRWLSFFEERGHTVVPSASLIADDPTLLLVPAGMVPFKPYFLGEVKPPFARATSVQKC 65
Query: 113 IRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE-----FGLPANRLW 167
+RT D+E VG+T+RH TFF+M GNFSFGDYFK+ AI+ AWE T +GL RLW
Sbjct: 66 VRTPDIEEVGKTTRHGTFFQMCGNFSFGDYFKEGAIKLAWELLTSPQDKGGYGLDPERLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCS 227
I+VY+DDDEA IW++ VGVP E I+R+G DN+W+ G GPCGPCSEI YD P+ G
Sbjct: 126 ITVYKDDDEAERIWHEVVGVPKERIQRLGMKDNYWSMGVPGPCGPCSEINYDRGPEFGAE 185
Query: 228 DVDLGDDTRFIEFYNLVFMQYNKKDDGS------LEPLKQKNIDTGLGLERIARILQKVP 281
+D R++E +NLVFMQY + + L L KNIDTGLGLER+A ILQ V
Sbjct: 186 GGPAVNDERYVEIWNLVFMQYERGEGTGKDNFEILGDLPSKNIDTGLGLERLAMILQGVQ 245
Query: 282 NNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRG 341
N YE D +I KA+EL V Y ++ ++++L+++ DH+R L+ DGV P N GRG
Sbjct: 246 NMYEIDTSMAVIDKATELTGVRYGDAH-ASDVSLRVVTDHMRTATMLIGDGVTPGNEGRG 304
Query: 342 YVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEE 401
YV+RR++RRA+R RLLG G +L + + ++ EL T +RI +
Sbjct: 305 YVLRRIMRRAIRNMRLLGATGPVVKDLIDVVIGMMGQQYPELITD--------RERIEKV 356
Query: 402 LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKE 461
EE F++TL+ G +LD A+S T+ +GS L G AFLL+DT+GFP+++T E
Sbjct: 357 ALAEENAFLKTLKAGTNILDT----AVSDTKAAGSTV-LPGDKAFLLHDTWGFPIDLTLE 411
Query: 462 VAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSA---DLAEKIPDTEFLGYDTL 518
+A E G+SVD +GF M+ QR +++A A K D ++A++ T+F+GY
Sbjct: 412 MAAEQGLSVDEEGFRRLMKEQRERAKADAQAKKTGHADLGAYREIADRAGATDFIGYTDT 471
Query: 519 SAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAV 578
++ V +LV+G ++G +VE++L+RTPFYAE GGQIGD G + G AV
Sbjct: 472 EGESTVVGILVDGVSSPAATEGDEVEIVLDRTPFYAEGGGQIGDTGKIKADSG-----AV 526
Query: 579 VEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKV 638
+EV+D +K + V+VHKG ++ G + VG + A +D + R+ H+ATHL AL+
Sbjct: 527 IEVRDCQKPVPGVYVHKGVVQVGEVTVGAKAHASIDDRRRKAIARAHSATHLTHQALRDA 586
Query: 639 IGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAK 698
+G +QAGS R RFDF + + ++E+ IN + ++ VM +D+AK
Sbjct: 587 LGPTAAQAGSENQPGRFRFDFGSPSAVPTAVMTDVEQKINEVLARDLDVRADVMGIDEAK 646
Query: 699 RAGAIAMFGEKYGEQVKI 716
+ GAIA FGEKYGE+V++
Sbjct: 647 KQGAIAEFGEKYGERVRV 664
>gi|390575999|ref|ZP_10256079.1| alanyl-tRNA ligase [Burkholderia terrae BS001]
gi|420253991|ref|ZP_14757017.1| alanine--tRNA ligase [Burkholderia sp. BT03]
gi|389932140|gb|EIM94188.1| alanyl-tRNA ligase [Burkholderia terrae BS001]
gi|398050334|gb|EJL42706.1| alanine--tRNA ligase [Burkholderia sp. BT03]
Length = 874
Score = 547 bits (1410), Expect = e-153, Method: Compositional matrix adjust.
Identities = 298/679 (43%), Positives = 415/679 (61%), Gaps = 44/679 (6%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR++FL F+ S+GH ++ S+SLVP DPT+L T +GM+QFK +FLG R RA TSQR
Sbjct: 6 IREKFLKFFESKGHTIVRSSSLVPGNDPTLLFTNSGMVQFKDVFLGAESRPYSRATTSQR 65
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI +AWE T + LP +LW
Sbjct: 66 SVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAIHYAWELLTGVYQLPKEKLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYYDF 220
++VY++DDEAF IW KEVGVP E I R+G A DNFW GPCGPCSEI+YD
Sbjct: 126 VTVYQEDDEAFNIWEKEVGVPAERIIRIGDNKGARYASDNFWQMADVGPCGPCSEIFYDH 185
Query: 221 HPD--RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQ 278
PD G D R+IE +NLVFMQ+++ G++ PL ++ +DTG+GLERIA +LQ
Sbjct: 186 GPDVWGGPPGSPEEDGDRYIEIWNLVFMQFSRDAQGNMTPLPKQCVDTGMGLERIAAVLQ 245
Query: 279 KVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNI 338
V +NYE DL +IK A V D +N +LK+I DH+RA +L+ DGV P N
Sbjct: 246 HVHSNYEIDLFQALIKAAGRETGV-----EDLSNNSLKVIADHIRACSFLIVDGVIPGNE 300
Query: 339 GRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRI 398
GRGYV+RR++RRA+R G LG K G+F + + ++K EQR+
Sbjct: 301 GRGYVLRRIVRRAIRHGYKLGRK--------GSFFHKMVTDLVAQMGGAYPELKDAEQRV 352
Query: 399 LEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEI 458
+ L++EE RF +T+E G +L+ LAD S+ ++ L G+ AF L+DT+GFP+++
Sbjct: 353 TDVLRQEEERFFETIEHGMSILESALADLESKGGKT-----LDGEVAFKLHDTYGFPLDL 407
Query: 459 TKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTL 518
T +V E V+VD FD M QR Q++AA K+ + L T F GY+ +
Sbjct: 408 TADVCREREVTVDEPAFDEAMARQREQARAA-GKFKM----AQGLEYSGAKTTFHGYEEI 462
Query: 519 S-AKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTA 577
A + +L V+G V +V+KG V+L+ TPFYAESGGQ+GD G L +
Sbjct: 463 VFDDAKITALYVDGASVKEVTKGQQAVVVLDHTPFYAESGGQVGDQGVL------ANASV 516
Query: 578 VVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKK 637
V D K V H GT+ +G L+VG V+A +D R R +H+ATHL+ AL++
Sbjct: 517 RFAVADTLKVQADVVGHHGTLEQGTLKVGDVVKAEIDAIRRARTARNHSATHLMHKALRE 576
Query: 638 VIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDA 697
V+G Q GSLV D+ RFDF + P+ D ++ +E ++N + +VM D+A
Sbjct: 577 VLGGHVQQKGSLVDADKTRFDFAHNAPMTDDQIRHVESIVNAEVLANAPGIVQVMPYDEA 636
Query: 698 KRAGAIAMFGEKYGEQVKI 716
+ GA+A+FGEKYG++V++
Sbjct: 637 VKGGAMALFGEKYGDEVRV 655
>gi|295106657|emb|CBL04200.1| alanyl-tRNA synthetase [Gordonibacter pamelaeae 7-10-1-b]
Length = 882
Score = 547 bits (1410), Expect = e-153, Method: Compositional matrix adjust.
Identities = 293/678 (43%), Positives = 418/678 (61%), Gaps = 38/678 (5%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATS--Q 110
IR+++L ++ ++G K PS+SL+P+DP++LLT AGM+QFKP FL + + P T+ Q
Sbjct: 9 IREKYLSYFEAKGCKRWPSSSLIPDDPSLLLTSAGMVQFKPYFLQQKQLEAPYVGTTTAQ 68
Query: 111 RCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWISV 170
+C+RTND++ +G T RH +FFEMLGNFSFG YFKKE WA+EFST GLPA RL+ +V
Sbjct: 69 KCVRTNDIDIIGTTGRHLSFFEMLGNFSFGAYFKKEMCAWAYEFSTEVLGLPAERLYFTV 128
Query: 171 YEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSDVD 230
Y DDDE EIW K +GVP +HI R+G +DNFW +G TGPCGPCSEIYYD + GC D
Sbjct: 129 YLDDDETIEIW-KGLGVPEDHISRLGEEDNFWRAGPTGPCGPCSEIYYDQGEEFGCGSPD 187
Query: 231 LG---DDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETD 287
D RF+E++NLVF QY+ ++DGS PL +KNIDTG+GLERIA I+Q V +NYETD
Sbjct: 188 CAPGCDCDRFLEYWNLVFTQYDGQEDGSFVPLPKKNIDTGMGLERIAAIMQGVQSNYETD 247
Query: 288 LIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRL 347
++ ++ L Y D +L+L+I+ DH R++ ++++DG+ PSN GRGYV+RRL
Sbjct: 248 VLRSLVGVGERLTGAVYGADAD-ADLSLRIMADHSRSVTFMIADGILPSNEGRGYVLRRL 306
Query: 348 IRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREEL 407
+RRAV G LLG L+ FL ++ + L + ++ + + EE
Sbjct: 307 LRRAVMKGHLLG--------LDKPFLNEYVDEIVNLMGDVYPEIVENRELARRVILSEEE 358
Query: 408 RFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHG 467
RF TL +G LD+ LA G V L G AF L+DT+GFPVE+T+E+ E G
Sbjct: 359 RFGATLRQGRAFLDEALAGI------EGEV--LPGDRAFTLHDTYGFPVEVTRELCGERG 410
Query: 468 VSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDS-----ADLAEKIPDTEFLGYDTLSAKA 522
+ VDM+GF M+ QR +++AA+ + + ++ E + TEFLGY A A
Sbjct: 411 IEVDMEGFGRCMDEQRERARAANTKDAEAAWSTYGGVMNEILEAVGPTEFLGYTKNEADA 470
Query: 523 IVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVK 582
V +++ +G+ V + G + V+L+ TPFYAE GGQIGD G L + VV V
Sbjct: 471 RVLAIVKDGQQVDVLEAGEEGRVVLDATPFYAEKGGQIGDTGVL------AEDGVVVAVL 524
Query: 583 DVKKSLGSVFVHKGTIRE----GVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKV 638
D K+ + H + + G ++VG V A +D R+R + +HTATH+L AL++V
Sbjct: 525 DTKEPEKGLIAHTVKVMDEPAGGRIQVGDTVHAAIDVPRRERIRRNHTATHILHWALRQV 584
Query: 639 IGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAK 698
+G QAGS VA RLRFDF + ++ E+ERL N + + + ++ +L A+
Sbjct: 585 LGDHVKQAGSYVADSRLRFDFTHFEAMTAEQIAEVERLANEKVMENHPVRAYETSLASAR 644
Query: 699 RAGAIAMFGEKYGEQVKI 716
AG +A+FGEKYGE V++
Sbjct: 645 EAGVMALFGEKYGEFVRV 662
>gi|187478846|ref|YP_786870.1| alanyl-tRNA synthetase [Bordetella avium 197N]
gi|123514444|sp|Q2KY72.1|SYA_BORA1 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|115423432|emb|CAJ49966.1| alanyl-tRNA synthetase [Bordetella avium 197N]
Length = 873
Score = 547 bits (1410), Expect = e-153, Method: Compositional matrix adjust.
Identities = 306/682 (44%), Positives = 414/682 (60%), Gaps = 52/682 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR++FL F+ S+GH ++PS+SLVP DPT+L T +GM+QFK +F GK R RA +SQR
Sbjct: 6 IRQKFLQFFQSKGHSIVPSSSLVPGNDPTLLFTNSGMVQFKDVFTGKEKRPYTRATSSQR 65
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI++AWE T + LP +LW
Sbjct: 66 SVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAIRFAWELLTTVYKLPVEKLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYYDF 220
++VY++DDEA++IW KEVGVP E I R+G A DNFW G TGPCGPC+EI+YD
Sbjct: 126 VTVYQEDDEAYDIWAKEVGVPTERIIRIGDNKGARYASDNFWQMGDTGPCGPCTEIFYDH 185
Query: 221 HPD--RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQ 278
PD G D R+IE +NLVFMQ+ + G++ PL + +DTG+GLERIA +LQ
Sbjct: 186 GPDIWGGPPGSPEEDGDRYIEIWNLVFMQFERDAAGNMTPLPKPCVDTGMGLERIAAVLQ 245
Query: 279 KVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNI 338
V +NYE DL +I A+ V N +LK+I DH+RA +L+ DGV PSN
Sbjct: 246 GVHSNYEIDLFQKLITAAARETGVQDLHDN-----SLKVIADHIRACSFLIVDGVIPSNE 300
Query: 339 GRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRI 398
GRGYV+RR++RRA+R G LG L + + E EL+ +R+
Sbjct: 301 GRGYVLRRIVRRALRHGYKLGQTKPFFYRLVPDLVAQMGEAYPELANM--------AERV 352
Query: 399 LEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPR---LSGQDAFLLYDTFGFP 455
+ LK+EE RF +TLE G K+LD LA VP+ L G F LYDT+GFP
Sbjct: 353 GQVLKQEEERFGETLEHGMKILDVALA----------QVPKGGLLDGNTLFTLYDTYGFP 402
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGY 515
V++T ++ E V +DM GF+ ME QR Q++AA K++ + + A+ T F GY
Sbjct: 403 VDLTADICREREVEIDMAGFEAAMERQRDQARAA-GKFKMAEGLNYEGAQ----TRFEGY 457
Query: 516 DTLS-AKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQ 574
+ L + A V +L V+G +V G V+L+ TPFYAESGGQ+GD G L V G
Sbjct: 458 EQLELSGAKVTALYVDGTQTDQVRAGQQAVVVLDATPFYAESGGQVGDTGLL-VADGLR- 515
Query: 575 QTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAA 634
V D K VF H G + EGVL+VG + A VD R R +H+ATHL+ A
Sbjct: 516 ----FAVADTLKVQAGVFGHHGLLEEGVLKVGDTLLARVDAVRRARTVRNHSATHLMHKA 571
Query: 635 LKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMAL 694
L++V+G Q GSLV D+ RFDF P+ ++ +E ++N + Q +VMA
Sbjct: 572 LREVLGAHVQQRGSLVDPDKTRFDFAHDAPMTAEQIARVEAIVNAEVLANQAAQARVMAY 631
Query: 695 DDAKRAGAIAMFGEKYGEQVKI 716
DDA + GA+A+FGEKYG+ V++
Sbjct: 632 DDAVKGGAMALFGEKYGDTVRV 653
>gi|285017964|ref|YP_003375675.1| alanyl-tRNA synthetase [Xanthomonas albilineans GPE PC73]
gi|283473182|emb|CBA15688.1| probable alanyl-trna synthetase (alanine--trna ligase) protein
[Xanthomonas albilineans GPE PC73]
Length = 883
Score = 547 bits (1410), Expect = e-153, Method: Compositional matrix adjust.
Identities = 308/683 (45%), Positives = 424/683 (62%), Gaps = 43/683 (6%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S IR FL+F+ +GH ++PSA L+P DPT+L T +GM+QFK +FLG R RAA
Sbjct: 8 STSQIRSDFLEFFKGKGHAIVPSAPLIPGNDPTLLFTNSGMVQFKDVFLGAEKRSYVRAA 67
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
QRC+R ND+++VG T+RHHTFFEMLGN+SFGDYFKK+AI WAWE T + LPA
Sbjct: 68 DVQRCLRAGGKHNDLDSVGYTARHHTFFEMLGNWSFGDYFKKDAIAWAWELLTQVWKLPA 127
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEI 216
RL ++VY DDEA+ +W VGVP E I R+G A DNFW TGPCGPC+EI
Sbjct: 128 ERLLVTVYHTDDEAYGLWRDMVGVPEERIVRIGDNKGAPYASDNFWQMADTGPCGPCTEI 187
Query: 217 YYDF--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIA 274
+YD H G D RFIE +NLVFMQ++++ DG+L PL +DTG+GLER+A
Sbjct: 188 FYDHGAHIAGGPPGSPEEDGDRFIEIWNLVFMQFDRQPDGTLVPLPAPCVDTGMGLERLA 247
Query: 275 RILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVF 334
ILQ V NYE DL +I+KASEL + D N +L++I DH+RA +L+ DGV
Sbjct: 248 AILQHVHTNYEIDLFQALIRKASEL-----TATTDLENKSLRVIADHIRACAFLIVDGVL 302
Query: 335 PSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAR 394
PSN GRGYV+RR+IRRA+R G +LG++ F + + L ++ A
Sbjct: 303 PSNEGRGYVLRRIIRRALRHGWMLGVR--------QGFFSKLVPTLVALMGEAYPELVAA 354
Query: 395 EQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGF 454
+ +L L+ EE RF +TL+ G K+ + + A A G V ++G+DAF LYDT+GF
Sbjct: 355 QDIVLRALQAEEERFAETLDAGMKIFEDVAAKA------QGGV--IAGEDAFRLYDTYGF 406
Query: 455 PVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLG 514
P+++T+++A E + VD +GF+ ME QRR+++ A V ADL + T FLG
Sbjct: 407 PLDLTQDIARERALCVDEQGFETAMEEQRRRAREA-GKFGGGVQLPADLVATLAPTLFLG 465
Query: 515 YDTLSAKAI-VESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTN 573
YD+L A + V +LL +G+PV G V +L ++TPFYAESGGQ+GD G L QG
Sbjct: 466 YDSLQADGLRVVALLKDGRPVQSAQAGDAVIILTDKTPFYAESGGQVGDIGILL--QGGT 523
Query: 574 QQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQA 633
+ V D +K G H GT+ EG L++G + VD + R+ ++H+ATHLL A
Sbjct: 524 R----CAVTDTQKFAGQFHGHVGTLIEGTLKIGDVLAGQVDAERRRATILNHSATHLLHA 579
Query: 634 ALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMA 693
AL++V+G Q GSLVA DRLRFDF+ +P+ EL IER +N + + ++ M
Sbjct: 580 ALREVLGTHVHQKGSLVAPDRLRFDFSHFQPIAAKELALIERKVNQQVRANHAVEVHQMG 639
Query: 694 LDDAKRAGAIAMFGEKYGEQVKI 716
+ +A GA+A+FGEKYGE+V++
Sbjct: 640 MQEALDFGAMALFGEKYGERVRV 662
>gi|384256535|ref|YP_005400469.1| alanyl-tRNA synthetase [Rahnella aquatilis HX2]
gi|380752511|gb|AFE56902.1| alanyl-tRNA synthetase [Rahnella aquatilis HX2]
Length = 875
Score = 547 bits (1410), Expect = e-153, Method: Compositional matrix adjust.
Identities = 312/686 (45%), Positives = 430/686 (62%), Gaps = 56/686 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH ++ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHNIVSSSSLVPTNDPTLLFTNAGMNQFKDVFLGLDKRDYNRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AI +AWE T E F LP +
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAINYAWELLTGENWFNLPKEK 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEAFEIW KEVGVP E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYETDDEAFEIWEKEVGVPKERIIRIGDNKGGAFASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR------GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLER 272
D H D G ++ D GD R+IE +NLVFMQ+N++ DG++ PL + ++DTG+GLER
Sbjct: 188 D-HGDHIWGGPPGSAEED-GD--RYIEIWNLVFMQFNRQADGTMLPLPKPSVDTGMGLER 243
Query: 273 IARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDG 332
I ++Q V +NY+ DL +I +E+ + D +N +L++I DH+R+ +L++DG
Sbjct: 244 ITAVMQHVNSNYDIDLFQKLIAAVAEVTGAT-----DLSNKSLRVIADHIRSCAFLIADG 298
Query: 333 VFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVK 392
V PSN RGYV+RR+IRRA+R G +LG + F + IE+ +++K
Sbjct: 299 VIPSNENRGYVLRRIIRRAIRHGNMLGA--------QDTFFYKLVAPLIEVMGPAATELK 350
Query: 393 AREQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTF 452
++ + + LK EE +F +TLERG LLD+ LA T L G+ AF LYDTF
Sbjct: 351 EQQAMVEQLLKTEEEQFARTLERGLALLDEELAALKGDT--------LDGEIAFRLYDTF 402
Query: 453 GFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEF 512
GFP+++T +V E + VD GF+ M+ QRR+ A + S D ++ + T+F
Sbjct: 403 GFPLDLTADVCRERNLKVDEAGFEKAMDVQRRR---ARESSGFSADYNS-MVRVDGVTQF 458
Query: 513 LGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGT 572
GY+ L + V +L V+G+PV + G + V+L+ TPFY ESGGQ+GD G L T
Sbjct: 459 SGYEHLQRHSKVVALFVDGQPVNDIQAGVNAIVVLDDTPFYGESGGQVGDKGILKTT--- 515
Query: 573 NQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQ 632
T V V D +K G H+G + G L +G VEA VD R R +++H+ATHLL
Sbjct: 516 ---TGVFSVSDTQK-YGKAIGHQGALSAGKLSIGDSVEAEVDVARRDRIRLNHSATHLLH 571
Query: 633 AALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVM 692
AAL++V+G+ +Q GSLV + LRFDF+ + E+ ++E L+N I +QT +M
Sbjct: 572 AALRQVLGKHVAQKGSLVNDNYLRFDFSHFEAMKPEEIRQVEDLVNAQIRRNLPIQTTIM 631
Query: 693 ALDDAKRAGAIAMFGEKYGEQVKISS 718
LD+AK GA+A+FGEKY + V++ S
Sbjct: 632 DLDEAKEKGAMALFGEKYEDSVRVLS 657
>gi|337287419|ref|YP_004626892.1| alanyl-tRNA synthetase [Thermodesulfatator indicus DSM 15286]
gi|335360247|gb|AEH45928.1| alanyl-tRNA synthetase [Thermodesulfatator indicus DSM 15286]
Length = 881
Score = 547 bits (1410), Expect = e-153, Method: Compositional matrix adjust.
Identities = 303/676 (44%), Positives = 423/676 (62%), Gaps = 30/676 (4%)
Query: 50 GDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
G IRK FLD++A GH+++PS+ LVP +DPT+L T AGM+QFK +FLG+ R RAA+
Sbjct: 6 GKEIRKLFLDYFAKHGHEIVPSSPLVPADDPTLLFTNAGMVQFKKVFLGQEERPYKRAAS 65
Query: 109 SQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPAN 164
Q+C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK+EAI +AW+F T LP
Sbjct: 66 CQKCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKEEAIYYAWDFLTKVLELPKE 125
Query: 165 RLWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDR 224
RL+++VY+DDDEAF +W K G+P E I R+G DNFW G TGPCGPCSEI +D P+
Sbjct: 126 RLYVTVYKDDDEAFSLWQKIAGLPAERIVRLGEKDNFWAMGDTGPCGPCSEIIFDQGPEV 185
Query: 225 GCS--DVDLGDDT-RFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVP 281
GC D +G D R++E +NLVFMQY + + G+L PL + IDTG+GLERI +Q V
Sbjct: 186 GCGRPDCQVGCDCDRYLELWNLVFMQYERDEKGNLSPLPRPCIDTGMGLERITATIQGVK 245
Query: 282 NNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRG 341
N++ DL ++ K S+L Y + R ++ ++I DH RA +L++DGV PSN GRG
Sbjct: 246 TNFDCDLFAGLMAKISDLTGFIYGEDKKR-DVAFRVIADHSRAAAFLIADGVLPSNEGRG 304
Query: 342 YVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEE 401
YV+RR+IRRAVR GR LG LE FL A +E + + ++ Q I +
Sbjct: 305 YVLRRIIRRAVRFGRTLG--------LEKPFLYDTASVVVEEMSDVYPELLRAAQTIEKI 356
Query: 402 LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKE 461
L EE RF +TLERG LL++ L + ++G + G F LYDT+GFP +I ++
Sbjct: 357 LVLEEERFRETLERGLALLEE----ELKKLSQAGQ-KVIPGAFIFKLYDTYGFPYDIVRD 411
Query: 462 VAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDS-ADLAEKIPDTEFLGYDTLSA 520
+A E G +DM GF+ EM QR +S+ A L EK EF+GY+T A
Sbjct: 412 IALERGFELDMLGFEKEMAKQRERSRKAWKGEMAKAPQVFIKLLEKGLGKEFVGYETTEA 471
Query: 521 KAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVE 580
+A + +++ +G+ V ++S G E + + TPFY E+GGQ+GD G + +G E
Sbjct: 472 EAEILAMVKDGQEVEEISAGEKAEAVFSETPFYGEAGGQVGDTGLVIGPEGQ------AE 525
Query: 581 VKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIG 640
V D + LG +F+HK ++ G L+ G +V+ V R HHTATHLL AAL++++G
Sbjct: 526 VTDTYR-LGELFIHKLKVKTGKLKKGEKVKLSVFSSRRAAIARHHTATHLLHAALRRLLG 584
Query: 641 QETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRA 700
QAGSLVA +RLRFDF PL E+ +E LIN + D ++ K+M+ +A +
Sbjct: 585 DHVHQAGSLVAPERLRFDFTHFEPLTQEEIFALEDLINARVRDNLPVEVKLMSYQEAVKQ 644
Query: 701 GAIAMFGEKYGEQVKI 716
GA+A+FGEKY ++V++
Sbjct: 645 GAMALFGEKYEDKVRV 660
>gi|408676821|ref|YP_006876648.1| Alanyl-tRNA synthetase [Streptomyces venezuelae ATCC 10712]
gi|328881150|emb|CCA54389.1| Alanyl-tRNA synthetase [Streptomyces venezuelae ATCC 10712]
Length = 889
Score = 547 bits (1410), Expect = e-153, Method: Compositional matrix adjust.
Identities = 306/678 (45%), Positives = 424/678 (62%), Gaps = 33/678 (4%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQRC 112
IR+R+L F+ RGH V+PSASL+ +DPT+LL AGM+ FKP FLG+V RA++ Q+C
Sbjct: 6 IRRRWLSFFEERGHTVVPSASLIADDPTLLLVPAGMVPFKPYFLGEVKPPFSRASSVQKC 65
Query: 113 IRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE-----FGLPANRLW 167
+RT D+E VG+T+RH TFF+M GNFSFGDYFK+ AI+ AWE T +GL +LW
Sbjct: 66 VRTPDIEEVGKTTRHGTFFQMCGNFSFGDYFKEGAIKLAWELLTTPVEHGGYGLEPEKLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCS 227
I+VY++DDEA +IW VGVP E I+R+G DN+W+ G GPCGPCSEI YD P+ G
Sbjct: 126 ITVYQEDDEAEQIWRDVVGVPAERIQRLGKKDNYWSMGVPGPCGPCSEINYDRGPEFGVE 185
Query: 228 DVDLGDDTRFIEFYNLVFMQYNK-----KDDGS-LEPLKQKNIDTGLGLERIARILQKVP 281
+D R++E +NLVFMQY + KDD L L KNIDTGLGLER+A ILQ V
Sbjct: 186 GGPAVNDERYVEIWNLVFMQYERGEGSGKDDFPILGELPSKNIDTGLGLERLAMILQGVQ 245
Query: 282 NNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRG 341
N YETD + +I KA+ L V+Y +++D ++++L+++ DH+R V L+ DGV P N GRG
Sbjct: 246 NMYETDTLQVVIDKATALTGVAYGKAHD-SDVSLRVVADHMRTSVMLIGDGVTPGNEGRG 304
Query: 342 YVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEE 401
YV+RR++RRAVR RLLG G G L + ++ E+ EL T +RI
Sbjct: 305 YVLRRIMRRAVRNMRLLGASGPVVGELVDTVINTMGEQYPELITD--------RKRIETV 356
Query: 402 LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKE 461
EE F++ L+ G +LD A++ T+ +G LSG AFLL+DT+GFP+++T E
Sbjct: 357 ALAEEAAFLKALKGGTNILDT----AVTETKAAGGT-VLSGDKAFLLHDTWGFPIDLTLE 411
Query: 462 VAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSA---DLAEKIPDTEFLGYDTL 518
+A E G+SVD GF M+ QR +++A A K D ++A+ TEF GY
Sbjct: 412 MASEQGLSVDEDGFRRLMKEQRDRAKADAKAKKTGHADMTSYREIADSNGATEFTGYTNT 471
Query: 519 SAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAV 578
++ V LLVNG S+G +VEV+L+RTPFYAE GGQI D G + + G AV
Sbjct: 472 EGESTVVGLLVNGVSSPAASEGDEVEVVLDRTPFYAEGGGQIADQGRIKLHSG-----AV 526
Query: 579 VEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKV 638
+EV+DV++ + V VHKG+++ G + VG A +D + R+ H+ATHL AL+
Sbjct: 527 IEVRDVQQPVPGVSVHKGSVQVGEVTVGATAYATIDVRRRRAIARAHSATHLTHQALRDA 586
Query: 639 IGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAK 698
+G +QAGS R RFDF + L ++E+ IN + + +VM +D+AK
Sbjct: 587 LGPTAAQAGSENQPGRFRFDFGSPNAVPGAVLTDVEQKINEVLSRELEVHAEVMPIDEAK 646
Query: 699 RAGAIAMFGEKYGEQVKI 716
R GAIA FGEKYGE+V++
Sbjct: 647 RQGAIAEFGEKYGEKVRV 664
>gi|205830052|sp|A1R709.2|SYA_ARTAT RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
Length = 892
Score = 547 bits (1410), Expect = e-153, Method: Compositional matrix adjust.
Identities = 300/683 (43%), Positives = 419/683 (61%), Gaps = 39/683 (5%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQRC 112
I KR++DF+ ++GH +PSASLV DP++L T+AGM+ F P + RA + Q+C
Sbjct: 6 ITKRWVDFFVNKGHTAVPSASLVSSDPSLLFTVAGMVPFIPYLTAREEPPYSRATSVQKC 65
Query: 113 IRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE-----FGLPANRLW 167
IRT D+E VG+T+RH TFF+M GNFSFGDYFK++AI++A+E T +GLPA RLW
Sbjct: 66 IRTGDIEEVGKTARHGTFFQMCGNFSFGDYFKEDAIKFAFELLTTSVDDGGYGLPAERLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCS 227
++VYE+DDEA E+W K G+P E I+RMG DN+W++G GP GPCSEIYYD P G
Sbjct: 126 VTVYEEDDEAKELWLKNTGIPAERIQRMGKADNYWSTGQPGPAGPCSEIYYDRGPAYGIE 185
Query: 228 DVDLGDDTRFIEFYNLVFMQY------NKKDDGSLEPLKQKNIDTGLGLERIARILQKVP 281
L D+TR+IE +NLVFMQY +K D + L QKNIDTGLG+ER+A ILQ V
Sbjct: 186 GGPLADETRYIEIWNLVFMQYQIENVRSKVDFDIVGELPQKNIDTGLGMERLAMILQGVE 245
Query: 282 NNYETDLIFPIIKKASELANVSYAQS------NDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
N YETD + P+I KA+EL+ Y + + ++ ++++GDH+R+ + L++DGV P
Sbjct: 246 NMYETDQVRPVIDKAAELSGREYTSAESPEDPHHTDDVRMRVVGDHIRSALMLIADGVAP 305
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN GRGYV+RRLIRRAVR RLLG+ E A LP + + + + V+
Sbjct: 306 SNEGRGYVLRRLIRRAVRAMRLLGV--------EKACLPDLLPASRDAMKGVYPVVETDF 357
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
RI EE F++T+ G L+ DA++ ++ +G VP LSG DAF L+DT+GFP
Sbjct: 358 ARISRIAYAEEKAFLRTIASGTARLE----DAVAESKAAG-VP-LSGADAFALHDTYGFP 411
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKI--PDTEFL 513
+++T E+AEE G+ VD GF M QR+++QA K D + E + +T F
Sbjct: 412 IDLTLEMAEEAGLQVDEAGFRALMLEQRQRAQADAKGKKGGHADLSAYQELLGKGETVFT 471
Query: 514 GYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTN 573
GYD L +A V ++ G+ V S G ++E++LN TPFYAE+GGQ D G +
Sbjct: 472 GYDELEGEAKVRGIVSGGRAVAHASTGDEIELVLNETPFYAEAGGQSADTGLI------T 525
Query: 574 QQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQA 633
VVEV DV++ + + VHK +REG + V A VD + R A+ HT TH++ A
Sbjct: 526 GDGFVVEVLDVQRPIKGLSVHKAIVREGEIGSDALVRAAVDRERRHAAEQAHTGTHIVHA 585
Query: 634 ALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMA 693
AL +++G E +Q GS LRFDF + L EIE + N I + + TKVM
Sbjct: 586 ALHQILGPEATQRGSYNKAGYLRFDFAWGEGLSTATRSEIEEVSNIAIRNNFRVDTKVMG 645
Query: 694 LDDAKRAGAIAMFGEKYGEQVKI 716
L +AK GA+A+FGE YG +V++
Sbjct: 646 LAEAKALGAMALFGENYGSEVRV 668
>gi|119961931|ref|YP_948021.1| alanyl-tRNA synthetase [Arthrobacter aurescens TC1]
gi|403527488|ref|YP_006662375.1| alanyl-tRNA synthetase AlaS [Arthrobacter sp. Rue61a]
gi|119948790|gb|ABM07701.1| alanyl-tRNA synthetase [Arthrobacter aurescens TC1]
gi|403229915|gb|AFR29337.1| alanyl-tRNA synthetase AlaS [Arthrobacter sp. Rue61a]
Length = 918
Score = 547 bits (1409), Expect = e-153, Method: Compositional matrix adjust.
Identities = 300/683 (43%), Positives = 419/683 (61%), Gaps = 39/683 (5%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQRC 112
I KR++DF+ ++GH +PSASLV DP++L T+AGM+ F P + RA + Q+C
Sbjct: 32 ITKRWVDFFVNKGHTAVPSASLVSSDPSLLFTVAGMVPFIPYLTAREEPPYSRATSVQKC 91
Query: 113 IRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE-----FGLPANRLW 167
IRT D+E VG+T+RH TFF+M GNFSFGDYFK++AI++A+E T +GLPA RLW
Sbjct: 92 IRTGDIEEVGKTARHGTFFQMCGNFSFGDYFKEDAIKFAFELLTTSVDDGGYGLPAERLW 151
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCS 227
++VYE+DDEA E+W K G+P E I+RMG DN+W++G GP GPCSEIYYD P G
Sbjct: 152 VTVYEEDDEAKELWLKNTGIPAERIQRMGKADNYWSTGQPGPAGPCSEIYYDRGPAYGIE 211
Query: 228 DVDLGDDTRFIEFYNLVFMQY------NKKDDGSLEPLKQKNIDTGLGLERIARILQKVP 281
L D+TR+IE +NLVFMQY +K D + L QKNIDTGLG+ER+A ILQ V
Sbjct: 212 GGPLADETRYIEIWNLVFMQYQIENVRSKVDFDIVGELPQKNIDTGLGMERLAMILQGVE 271
Query: 282 NNYETDLIFPIIKKASELANVSYAQS------NDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
N YETD + P+I KA+EL+ Y + + ++ ++++GDH+R+ + L++DGV P
Sbjct: 272 NMYETDQVRPVIDKAAELSGREYTSAESPEDPHHTDDVRMRVVGDHIRSALMLIADGVAP 331
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN GRGYV+RRLIRRAVR RLLG+ E A LP + + + + V+
Sbjct: 332 SNEGRGYVLRRLIRRAVRAMRLLGV--------EKACLPDLLPASRDAMKGVYPVVETDF 383
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
RI EE F++T+ G L+ DA++ ++ +G VP LSG DAF L+DT+GFP
Sbjct: 384 ARISRIAYAEEKAFLRTIASGTARLE----DAVAESKAAG-VP-LSGADAFALHDTYGFP 437
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKI--PDTEFL 513
+++T E+AEE G+ VD GF M QR+++QA K D + E + +T F
Sbjct: 438 IDLTLEMAEEAGLQVDEAGFRALMLEQRQRAQADAKGKKGGHADLSAYQELLGKGETVFT 497
Query: 514 GYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTN 573
GYD L +A V ++ G+ V S G ++E++LN TPFYAE+GGQ D G +
Sbjct: 498 GYDELEGEAKVRGIVSGGRAVAHASTGDEIELVLNETPFYAEAGGQSADTGLI------T 551
Query: 574 QQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQA 633
VVEV DV++ + + VHK +REG + V A VD + R A+ HT TH++ A
Sbjct: 552 GDGFVVEVLDVQRPIKGLSVHKAIVREGEIGSDALVRAAVDRERRHAAEQAHTGTHIVHA 611
Query: 634 ALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMA 693
AL +++G E +Q GS LRFDF + L EIE + N I + + TKVM
Sbjct: 612 ALHQILGPEATQRGSYNKAGYLRFDFAWGEGLSTATRSEIEEVSNIAIRNNFRVDTKVMG 671
Query: 694 LDDAKRAGAIAMFGEKYGEQVKI 716
L +AK GA+A+FGE YG +V++
Sbjct: 672 LAEAKALGAMALFGENYGSEVRV 694
>gi|383785783|ref|YP_005470352.1| alanyl-tRNA synthetase [Fervidobacterium pennivorans DSM 9078]
gi|383108630|gb|AFG34233.1| alanyl-tRNA synthetase [Fervidobacterium pennivorans DSM 9078]
Length = 867
Score = 547 bits (1409), Expect = e-153, Method: Compositional matrix adjust.
Identities = 295/675 (43%), Positives = 436/675 (64%), Gaps = 37/675 (5%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
+ D IR+ FL F+ S+GHK LPSASL+P+DP ++ T+AGM+ FKPIF GKV R T
Sbjct: 5 TSDEIREAFLSFFESKGHKRLPSASLIPDDPQLMFTVAGMVPFKPIFWGKVEPVYTRVTT 64
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
Q+C+RTND+ENVGRT RHHTFFEMLGNFSFGDYFKKEAI+WAWEF T +P +LW+
Sbjct: 65 CQKCVRTNDIENVGRTPRHHTFFEMLGNFSFGDYFKKEAIEWAWEFVTKVLEMPEEKLWV 124
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWN-SGATGPCGPCSEIYYDFHPDRGCS 227
++YE DDEAFEIW K +GVP I RMG +DNFW +G TGPCGPCSEI+YD +
Sbjct: 125 TIYEYDDEAFEIW-KSIGVPEHKIIRMGKEDNFWGPAGPTGPCGPCSEIHYDTGLEVPVK 183
Query: 228 D----VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNN 283
D D RFIE +NLVF ++ + ++G+L PL +KNIDTG GLERI+ ++Q V N
Sbjct: 184 DGGIPTPANTDGRFIEIWNLVFTEFYQDEEGNLHPLPRKNIDTGAGLERISAMMQGVLWN 243
Query: 284 YETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYV 343
++TDL PII++ + NV Y + + + ++++++I DH+RA+ ++++DGV PSN GRGYV
Sbjct: 244 FDTDLFAPIIERIQNVLNVKYKE-DPKKDVSIRVIADHVRAVTFMIADGVLPSNEGRGYV 302
Query: 344 VRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELK 403
+RR++RRA+R G LLG K FL I E ++ H+ ++ + + +K
Sbjct: 303 LRRVLRRALRHGVLLGAK--------EPFLYKIVESVVQKMGHVYPEIVEKRSFVENIVK 354
Query: 404 REELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVA 463
EEL+F+ L RG +L+ +++ + +++ +DAF LYDT+GFP++I +++A
Sbjct: 355 GEELKFIMNLSRGLELVQKIIE----------TKGKITAEDAFKLYDTYGFPIDILRDIA 404
Query: 464 EEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTLSAKAI 523
+E+ +D KGF+ ++ QR +S+ A V+ + + E +T F+GY+T+ ++
Sbjct: 405 QENNYELDEKGFEAYLQQQRERSRKAQGEVEFAQKTGYETLEI--ETVFVGYETMESEGT 462
Query: 524 VESLLVNGKPV--IKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEV 581
V + + + V I+ + E++L+ TPFYAE GGQ+ D G + G EV
Sbjct: 463 VVKIRKDNEFVDNIESPEPVQCELVLDVTPFYAEKGGQVSDKGTITWEGGK------FEV 516
Query: 582 KDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQ 641
+ V + + VH+G + G L VG++V + VDP +R+ +HTATHLL AAL+KV+G
Sbjct: 517 EYVYNPVEGIIVHRGKLT-GKLSVGQKVFSKVDP-IRKWTMRNHTATHLLHAALRKVLGT 574
Query: 642 ETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAG 701
QAGSLV +RLRFDF ++ L ++ IE L+N I A + T+V + D+A + G
Sbjct: 575 HVRQAGSLVEPERLRFDFTHYQALTKEQITAIEDLVNEVILSAIPVVTEVKSYDEAVKEG 634
Query: 702 AIAMFGEKYGEQVKI 716
A+A+F EKYG+ V++
Sbjct: 635 AMALFEEKYGDYVRV 649
>gi|255263093|ref|ZP_05342435.1| alanyl-tRNA synthetase [Thalassiobium sp. R2A62]
gi|255105428|gb|EET48102.1| alanyl-tRNA synthetase [Thalassiobium sp. R2A62]
Length = 884
Score = 547 bits (1409), Expect = e-153, Method: Compositional matrix adjust.
Identities = 296/684 (43%), Positives = 426/684 (62%), Gaps = 39/684 (5%)
Query: 46 FPSSGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVP 104
PS D IR RFLD+Y S GH+++ S+ LVP DPT++ +GM+QFK +F G R
Sbjct: 1 MPSLND-IRTRFLDYYKSEGHEIVSSSPLVPRNDPTLMFANSGMVQFKNLFTGAESRDYS 59
Query: 105 RAATSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFG 160
RA ++Q+C+R ND++NVG T+RHHTFFEMLGNFSFGDYFK +AI +AW T E G
Sbjct: 60 RATSAQKCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKDDAINYAWNMVTRELG 119
Query: 161 LPANRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDF 220
+ ++L ++VY DDDEA IW K G+ + I R+ DDNFW G+TGPCGP SEI+YD
Sbjct: 120 INKDKLVVTVYHDDDEAAAIWKKVAGLSDDKIIRIATDDNFWMMGSTGPCGPSSEIFYD- 178
Query: 221 HPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARIL 277
H D G D RF+E +NLVFMQY + +DGS PL ++IDTG+G+ER+A +L
Sbjct: 179 HGDHIWGGPPGSPEEDGDRFVEIWNLVFMQYEQFEDGSRSPLPNQSIDTGMGIERVAALL 238
Query: 278 QKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSN 337
Q +NY TDLI +I+ + AN + + + ++I DHLR+ +L++DGV PSN
Sbjct: 239 QGTNDNYATDLIRALIEAS---ANATSTDPDGPGKTHHRVIADHLRSTSFLIADGVMPSN 295
Query: 338 IGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQR 397
GRGYV+RR++RRA+R LLG + L + + + EL + Q
Sbjct: 296 DGRGYVLRRIMRRAMRHVHLLGAQDPLMHRLVPSLVGQMGAAYPEL---------GQAQA 346
Query: 398 ILEE-LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPV 456
++EE L+ EE RF QTLERG +LLD L D L+ + L GQ AF LYDT+GFP+
Sbjct: 347 LIEETLRLEETRFKQTLERGLRLLDDEL-DGLAEGTD------LPGQAAFKLYDTYGFPL 399
Query: 457 EITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSA--DLAEKIPDTEFLG 514
++T++ E G VD GFD M Q+ +++AA + +VD + D+A++ T+FLG
Sbjct: 400 DLTQDALREKGRGVDSDGFDEAMAEQKAKARAAWSGSGETVDATIWLDIADRDGATDFLG 459
Query: 515 YDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQ 574
YDT +A+A + +++ +G + + G V++++N+TPFY ESGGQ+GD G ++
Sbjct: 460 YDTETAEAQITAIVKHGAEIKSATVGDTVQIVVNQTPFYGESGGQVGDTGVVHA------ 513
Query: 575 QTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAA 634
V D +K+ G VF+H I +G EVG VE VDP R + + +H+ATHLL A
Sbjct: 514 DGLSARVTDTRKTAG-VFIHIAEITKGTFEVGTAVELNVDPTRRSQIRANHSATHLLHEA 572
Query: 635 LKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMAL 694
L++ +G +Q GSL A DRLRFDF+ + L +L+ +E +N +I ++T++M
Sbjct: 573 LRQSLGDHVAQRGSLNAPDRLRFDFSHGKALSLEQLQSVEAEVNAYIRQNTGVETRIMTP 632
Query: 695 DDAKRAGAIAMFGEKYGEQVKISS 718
DDA+ GA A+FGEKYG++V++ S
Sbjct: 633 DDARELGAQALFGEKYGDEVRVVS 656
>gi|455738443|ref|YP_007504709.1| Alanyl-tRNA synthetase [Morganella morganii subsp. morganii KT]
gi|455420006|gb|AGG30336.1| Alanyl-tRNA synthetase [Morganella morganii subsp. morganii KT]
Length = 875
Score = 547 bits (1409), Expect = e-153, Method: Compositional matrix adjust.
Identities = 303/690 (43%), Positives = 434/690 (62%), Gaps = 64/690 (9%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ ++GH+++ S+SLVP DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 8 IRQAFLDFFHTKGHQIVQSSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRPYTRATTAQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AI +AWE T + F LP +
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAINFAWELLTGKEWFNLPKEK 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VY DDEA+ IW EVGVP E I R+G A DNFW G TGPCGPC+EI++
Sbjct: 128 LWVTVYATDDEAYNIWKDEVGVPAERIIRIGDNKGAQYASDNFWQMGDTGPCGPCTEIFF 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG+LEPL + ++DTG+GLERI
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQSDGTLEPLPKPSVDTGMGLERITA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +I +++A V+ A +D T+ +L++I DH+R+ +L+ DGV P
Sbjct: 247 VLQHVNSNYDIDLFRKLI---ADVAKVTGA--DDLTSKSLRVIADHIRSCAFLICDGVIP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN GRGYV+RR+IRRAVR G +LG K L + + EL AR+
Sbjct: 302 SNEGRGYVLRRIIRRAVRHGYMLGAKDTFFYKLVAPLIDVMGSAGEEL---------ARQ 352
Query: 396 QRILEE-LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGF 454
+ ++E+ LK EE +F +TLERG +LLD LA T LSG+ AF LYDT+GF
Sbjct: 353 RVMVEKVLKSEEEQFARTLERGLQLLDDELASLTGDT--------LSGEAAFRLYDTYGF 404
Query: 455 PVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQ------AAHNAVKLSVDDSADLAEKIP 508
P+++T +V E + VD GF+ ME QRR+++ A +N++ + VD +D
Sbjct: 405 PLDLTADVCRERNLKVDEAGFEAAMEEQRRRARENSGFGADYNSL-IKVDKRSD------ 457
Query: 509 DTEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYV 568
F GYD A + +L G+PV +++ G + V+L++T FYAESGGQ+GD G L
Sbjct: 458 ---FSGYDHNEQAATIVALYKEGQPVTELNAGDEGLVILDKTAFYAESGGQVGDTGVL-- 512
Query: 569 TQGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTAT 628
+ Q +V++ + +++G H G + G L V ++ A +D + R +++H+AT
Sbjct: 513 -SSNDAQFSVLDTQKYGQAIG----HAGRVDSGKLTVNHKITAKIDEERRNAIRLNHSAT 567
Query: 629 HLLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQ 688
HL+ AAL++V+G+ SQ GSLV LRFDF+ + ++ E+E L+N I +
Sbjct: 568 HLMHAALRQVLGEHVSQKGSLVNDKYLRFDFSHFEAMTPAQIREVEALVNAEIRKNEPVV 627
Query: 689 TKVMALDDAKRAGAIAMFGEKYGEQVKISS 718
T++M L++AK GA+A+FGEKY E+V++ S
Sbjct: 628 TELMDLEEAKAKGAMALFGEKYDERVRVLS 657
>gi|357402889|ref|YP_004914814.1| alanyl-tRNA synthetase [Streptomyces cattleya NRRL 8057 = DSM
46488]
gi|337769298|emb|CCB78011.1| alanyl-tRNA synthetase [Streptomyces cattleya NRRL 8057 = DSM
46488]
Length = 889
Score = 547 bits (1409), Expect = e-153, Method: Compositional matrix adjust.
Identities = 305/678 (44%), Positives = 420/678 (61%), Gaps = 33/678 (4%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQRC 112
IR+R+L F+ RGH V+PSASL+ +DPT+LL AGM+ FKP FLG+V RA + Q+C
Sbjct: 6 IRRRWLRFFEERGHSVVPSASLIADDPTLLLVNAGMVPFKPYFLGEVKPPYARATSVQKC 65
Query: 113 IRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE-----FGLPANRLW 167
+RT D+E VG+T+RH TFF+M GNFSFGDYFK+ AI +AWE T +GL +LW
Sbjct: 66 VRTPDIEEVGKTTRHGTFFQMCGNFSFGDYFKEGAISYAWELLTTPQAAGGYGLEPEKLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCS 227
I+VYEDDDEA +IW VGVP E I+R+G DNFW+ G GPCGPCSEI YD P G
Sbjct: 126 ITVYEDDDEAEQIWRDVVGVPAERIQRLGKKDNFWSMGVPGPCGPCSEINYDRGPAFGPE 185
Query: 228 DVDLGDDTRFIEFYNLVFMQY------NKKDDGSLEPLKQKNIDTGLGLERIARILQKVP 281
+D R++E +NLVFMQY +K+D L L KNIDTGLGLER+A ILQ V
Sbjct: 186 GGPAVNDERYVEIWNLVFMQYERGAGTSKEDFPILGDLPAKNIDTGLGLERLAMILQGVN 245
Query: 282 NNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRG 341
N YETD + +I KA+EL V Y +D ++++L+++ DHLR L+ DGV P N GRG
Sbjct: 246 NMYETDTLRVVIDKATELTGVRYGDGHD-SDVSLRVVADHLRTSAMLIGDGVTPGNEGRG 304
Query: 342 YVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEE 401
YV+RR++RRA+R RLLG G +L L ++ ++ EL +RI
Sbjct: 305 YVLRRIMRRAIRNMRLLGATGPVVHDLLDVVLNTMGQQYPELLVD--------RKRIETV 356
Query: 402 LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKE 461
EE F++TL+ G +LD A++ T+ G+ L G AFLL+DT+GFP+++T E
Sbjct: 357 ALAEEAAFLKTLKAGTNILDT----AVTETKAKGA-SVLPGDKAFLLHDTWGFPIDLTLE 411
Query: 462 VAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLS-VDDSA--DLAEKIPDTEFLGYDTL 518
+A E G+SVD +GF M+ QR +++A A K D SA ++A+ T F GY
Sbjct: 412 MAAEQGLSVDEEGFRRLMKEQRERAKADARAKKTGHADLSAYREVADNSGATVFTGYTDH 471
Query: 519 SAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAV 578
++ V LLV+G P ++G +VEV+L+RTPFYAE GGQ+ D G + G AV
Sbjct: 472 EGESTVVGLLVDGLPSPAATEGDEVEVVLDRTPFYAEGGGQLADTGRIRTGTG-----AV 526
Query: 579 VEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKV 638
+EV+DV++ + V VHKG ++ G + VG A +D R+ H+ATHL AL+
Sbjct: 527 IEVRDVQQPVPGVTVHKGVVQVGEVTVGAGAHAAIDLVRRRAIARAHSATHLTHQALRDA 586
Query: 639 IGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAK 698
+G +QAGS A R RFDF + T L ++E+ IN + + +VM++ +AK
Sbjct: 587 LGPTAAQAGSENAPGRFRFDFGSPSAVPGTVLNDVEQKINEVLARELDVTAEVMSMAEAK 646
Query: 699 RAGAIAMFGEKYGEQVKI 716
+ GAIA FGEKYGE+V++
Sbjct: 647 KQGAIAEFGEKYGERVRV 664
>gi|423109873|ref|ZP_17097568.1| alanyl-tRNA synthetase [Klebsiella oxytoca 10-5243]
gi|376380808|gb|EHS93550.1| alanyl-tRNA synthetase [Klebsiella oxytoca 10-5243]
Length = 875
Score = 547 bits (1409), Expect = e-153, Method: Compositional matrix adjust.
Identities = 306/687 (44%), Positives = 436/687 (63%), Gaps = 62/687 (9%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTAQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI++AWE T E F LP +
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAIKYAWELLTGENWFALPKEK 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEAF+IW EVGVP E I R+G A DNFW G TGPCGPC+EI++
Sbjct: 128 LWVTVYETDDEAFDIWANEVGVPRERIIRIGDNKGAPFASDNFWQMGDTGPCGPCTEIFF 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGTPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +IK +++ + D +N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRDLIKSVADVTGAT-----DLSNKSLRVIADHIRSCAFLIADGVIP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRA+R G +LG K F + I++ ++K ++
Sbjct: 302 SNENRGYVLRRIIRRAIRHGNMLGAKE--------TFFWKLVAPLIDVMGSAGEELKQQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLQGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQ------AAHNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRARESSGFGADYNAM-IRVDGA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD+L V +L ++GK V V+ G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDSLELNGKVTALFIDGKAVNAVNAGQEAVVILDQTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G V + + +++G H G + G L+VG V+A VD RQR +++H+ATH
Sbjct: 513 KGAGFSFLVSDTQKYGQAIG----HIGKLNGGSLKVGDAVQADVDQARRQRIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G +Q GSLV LRFDF+ + E+ +E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVAQKGSLVNDKALRFDFSHFEAMKPEEIRAVEDLVNAQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKI 716
+M +D A+ +GA+A+FGEKY ++V++
Sbjct: 629 NIMDIDAARESGAMALFGEKYDDRVRV 655
>gi|15606507|ref|NP_213887.1| alanyl-tRNA synthetase [Aquifex aeolicus VF5]
gi|6226165|sp|O67323.1|SYA_AQUAE RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|2983727|gb|AAC07289.1| alanyl-tRNA synthetase [Aquifex aeolicus VF5]
Length = 867
Score = 547 bits (1409), Expect = e-153, Method: Compositional matrix adjust.
Identities = 295/676 (43%), Positives = 420/676 (62%), Gaps = 33/676 (4%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S IR+ FL F+ +GH + SA LVPE DPT+L AGM+ FK +FLG R RA
Sbjct: 4 SAHEIRELFLSFFEKKGHTRVKSAPLVPENDPTLLFVNAGMVPFKNVFLGLEKRPYKRAT 63
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
+ Q+C+R ND+E VG TSRHHTFFEMLGNFSFGDYFKKEAI++AWEF T LP
Sbjct: 64 SCQKCLRVSGKHNDLEQVGYTSRHHTFFEMLGNFSFGDYFKKEAIEYAWEFVTEVLKLPK 123
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPD 223
+L++SVY+DD+EA+ IWN+ +G+P E I R+G +DNFW G GPCGP SEIY D
Sbjct: 124 EKLYVSVYKDDEEAYRIWNEHIGIPSERIWRLGEEDNFWQMGDVGPCGPSSEIYV----D 179
Query: 224 RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNN 283
RG + D R++E +NLVFMQYN+ ++G L PL NIDTG+GLERIA +LQ +N
Sbjct: 180 RG---EEYEGDERYLEIWNLVFMQYNRDENGVLTPLPHPNIDTGMGLERIASVLQGKNSN 236
Query: 284 YETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYV 343
+E D+IFP+I+ E++ Y + + T++ L++I DHLRAI + +SDGV PSN GRGYV
Sbjct: 237 FEIDIIFPLIQFGEEVSGKKYGEKFE-TDVALRVIADHLRAITFAISDGVIPSNEGRGYV 295
Query: 344 VRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELK 403
+RR++RRA+R G LGI E FL + +++ +++ + + +K
Sbjct: 296 IRRILRRAMRFGYKLGI--------ENPFLYKGVDLVVDIMKEPYPELELSREFVKGIVK 347
Query: 404 REELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVA 463
EE RF++TL+ G + + +++ AL R++ LSG++ F YDT+GFPV++ E+A
Sbjct: 348 GEEKRFIKTLKAGMEYIQEVIQKALEEGRKT-----LSGKEVFTAYDTYGFPVDLIDEIA 402
Query: 464 EEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDD-SADLAEKIPDTEFLGYDTLSAKA 522
E G+ +D++GF E+E QR +++ V + L E + F+GY+ + ++
Sbjct: 403 REKGLGIDLEGFQCELEEQRERARKHFKVEAKKVKPVYSHLKELGKTSAFVGYEHMEWES 462
Query: 523 IVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVK 582
V L+ V ++ +G + EV+L TPFY E GGQIGD G + A+ +V+
Sbjct: 463 QVVGLVKGEGLVSELKEGEEGEVVLKETPFYPEGGGQIGDAGII------ESDKALFKVE 516
Query: 583 DVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQE 642
D +K + VH G + +G L+VG V A VD + R +HTATHLL AAL+ V+G+
Sbjct: 517 DTQKPTEGIIVHIGKVLKGTLKVGDTVHARVDKERRWDIMRNHTATHLLHAALRNVLGEH 576
Query: 643 TSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGA 702
QAGSLVA LRFDF L + EL+ +E L+N I + + MA D+A + GA
Sbjct: 577 VRQAGSLVADKYLRFDFTHFSALTEEELKRVEELVNEKIRENLPVNVMEMAYDEALKTGA 636
Query: 703 IAMFGEKYGEQVKISS 718
IA+F EKYGE+V++ S
Sbjct: 637 IAIFEEKYGERVRVIS 652
>gi|217077683|ref|YP_002335401.1| alanyl-tRNA synthetase [Thermosipho africanus TCF52B]
gi|217037538|gb|ACJ76060.1| alanyl-tRNA synthetase [Thermosipho africanus TCF52B]
Length = 859
Score = 547 bits (1409), Expect = e-153, Method: Compositional matrix adjust.
Identities = 298/672 (44%), Positives = 444/672 (66%), Gaps = 37/672 (5%)
Query: 51 DSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQ 110
D IR+ FL+F+ +GHK+LPSASL+PEDP +L TIAGM+ FKPIF GKV R AT Q
Sbjct: 4 DEIRRLFLEFFEKKGHKILPSASLIPEDPQLLFTIAGMVPFKPIFWGKVDPVYTRIATCQ 63
Query: 111 RCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWISV 170
+C+RT D+ENVG+T RHHTFFEMLGNFSFGDYFK+EAI+WAWEF T +P RLWISV
Sbjct: 64 KCVRTTDIENVGKTPRHHTFFEMLGNFSFGDYFKEEAIEWAWEFVTQVLKIPEERLWISV 123
Query: 171 YEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWN-SGATGPCGPCSEIYYDFHPDRGCSD- 228
Y+DD+EA+EIW K +GVP I ++G +DNFW +G TGPCGP +EI+YD D SD
Sbjct: 124 YKDDNEAYEIWRK-IGVPSSKILKLGKEDNFWGPAGPTGPCGPDTEIFYDTQRDVPTSDG 182
Query: 229 ---VDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYE 285
+ RF+E +NLVF ++ + ++G+L PLK+KNIDTG GLER+A ++Q V NN++
Sbjct: 183 KEPTPANTEGRFVEIWNLVFTEFYQDENGNLLPLKRKNIDTGAGLERVAAMMQGVYNNFD 242
Query: 286 TDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVR 345
TDL PII+ + NV Y + +++ ++++++I DH+RA+V+L+SDGVFPSN GRGYV+R
Sbjct: 243 TDLFAPIIEGICNILNVEY-KKDEKIDVSIRVIADHIRALVFLISDGVFPSNEGRGYVLR 301
Query: 346 RLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKRE 405
R++RRA R G+LLG FL + + + ++ ++ +++ E + E
Sbjct: 302 RILRRAARHGKLLGAN--------APFLHKLVDFVVNKMGNVYPEIVEKKEFTKEIILGE 353
Query: 406 ELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEE 465
E RF+Q L +G +L+++++ RE+ ++SG+ AF LYDT+GFP++I +++AEE
Sbjct: 354 EKRFLQNLNKGLELVEKVV-------RENNG--KISGEMAFKLYDTYGFPLDILRDLAEE 404
Query: 466 HGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDS-ADLAEKIPDTEFLGYDTLSAKAIV 524
+G +D +GF+ ME QR +++A V+ + DL K +EF+GY+ + V
Sbjct: 405 NGYVLDEQGFNEYMEKQRLLAKSAAGDVEFTKRTGYEDLKLK---SEFVGYEKYEEYSKV 461
Query: 525 ESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDV 584
++ V+ + ++ +D E++L RTPFYAE GGQ+ D G + +G N + V+ V
Sbjct: 462 LAIKVS--EFVNEAQDADCEIVLERTPFYAEKGGQVSDTG---IIKGENGEFL---VEYV 513
Query: 585 KKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETS 644
+ VH+G ++ G L VG +V A +D + R+ +HTATHLL AAL+KV+G
Sbjct: 514 YSPTEGIIVHRGKLK-GRLSVGEKVYAKIDIEKRKATARNHTATHLLHAALRKVLGTHVR 572
Query: 645 QAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIA 704
QAGSLV ++LRFDF L E+E++E+++N I +A + + D+A + GA+A
Sbjct: 573 QAGSLVESEKLRFDFTHFNALSVDEIEQVEKMVNNVILEAIDVIVEEKDYDEAVKEGAMA 632
Query: 705 MFGEKYGEQVKI 716
+F EKYG++V++
Sbjct: 633 LFEEKYGDKVRV 644
>gi|390949162|ref|YP_006412921.1| alanyl-tRNA synthetase [Thiocystis violascens DSM 198]
gi|390425731|gb|AFL72796.1| alanyl-tRNA synthetase [Thiocystis violascens DSM 198]
Length = 868
Score = 547 bits (1409), Expect = e-153, Method: Compositional matrix adjust.
Identities = 292/671 (43%), Positives = 419/671 (62%), Gaps = 38/671 (5%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
+R FLD++A R H+ + S+ LVP DPT+L T AGM+QFK +FLG+ R RA +SQR
Sbjct: 7 LRASFLDYFAQRQHERVASSPLVPANDPTLLFTNAGMVQFKEVFLGRERRAYQRAVSSQR 66
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK+EAI +AW++ T E LP +LW
Sbjct: 67 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKREAIGFAWDYLTRELALPPEKLW 126
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCS 227
I+V+ +DDEA IW E+G+ R GA DNFW+ G TGPCGPCSEI+YD P+
Sbjct: 127 ITVFTEDDEAAAIWLNEIGIDPARFSRCGAKDNFWSMGETGPCGPCSEIFYDHGPEIPGG 186
Query: 228 DVDLGD--DTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYE 285
D R++E +NLVFMQ+N+ DG+L PL + ++DTG+GLER+A ++Q V +NY+
Sbjct: 187 PPGSPDAEGDRYVEIWNLVFMQFNRDADGNLTPLPRPSVDTGMGLERLAAVMQGVHSNYD 246
Query: 286 TDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVR 345
DL +I A+++ + DR + +L++I DH+R+ +L+ DGV P N GRGYV+R
Sbjct: 247 IDLFRRLIDAAAQVTGCA-----DRADKSLRVIADHIRSAAFLIVDGVTPGNEGRGYVLR 301
Query: 346 RLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKRE 405
R++RRA+R G LG L + + EL T +A+ +RI + E
Sbjct: 302 RIMRRAIRHGYRLGCAEPFFHRLVTPLVTEMGAAYPELLTS-----QAQVERI---VLLE 353
Query: 406 ELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEE 465
E RF +TLE G ++LD+ +A R+ G+ F LYDTFGFP ++T ++A E
Sbjct: 354 EERFAETLEHGMRILDEAIAGLAD--------DRIPGETVFKLYDTFGFPTDLTADIARE 405
Query: 466 HGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTLSAKAIVE 525
G+S+DM GFD M Q+ +++AA + + D+ + +T+F GY+ L +A V
Sbjct: 406 RGLSLDMDGFDAAMGQQKERARAAS---QFGATQTLDIQIQ-GETDFCGYERLREEATVV 461
Query: 526 SLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVK 585
+L NG + + +L+ TPFY ESGGQIGD G+L +T EV D +
Sbjct: 462 ALYCNGVSRDTLDADEEGLAILDLTPFYGESGGQIGDRGWL------TAETGRFEVLDTQ 515
Query: 586 KSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQ 645
K V +H G + EG L VG ++A VD + R ++H+ATHLL AAL++V+G+ Q
Sbjct: 516 KKGEGVVIHIGRVTEGQLAVGDRIDARVDAERRSAIALNHSATHLLHAALRQVLGEHVQQ 575
Query: 646 AGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAM 705
GSLV +RLRFDF+ P+ +L IERL+N + +L++T++M L+DAK +GA+A+
Sbjct: 576 KGSLVGPERLRFDFSHFEPVTREQLLTIERLVNREVRANHLVETRIMNLEDAKASGAVAL 635
Query: 706 FGEKYGEQVKI 716
FGEKY EQV++
Sbjct: 636 FGEKYSEQVRV 646
>gi|392542964|ref|ZP_10290101.1| alanyl-tRNA ligase [Pseudoalteromonas piscicida JCM 20779]
Length = 871
Score = 547 bits (1409), Expect = e-152, Method: Compositional matrix adjust.
Identities = 304/677 (44%), Positives = 423/677 (62%), Gaps = 48/677 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+A + H+V+PS+SL+P D T+L T AGM+QFK FLG R RA +SQR
Sbjct: 13 IRQSFLDFFAKQQHQVVPSSSLIPGNDATLLFTNAGMVQFKDAFLGAEKRPYTRATSSQR 72
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AI++AW F T LP +L
Sbjct: 73 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKTDAIKFAWGFLTDVIKLPKEKLL 132
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDF--HPDRG 225
++VY +DDEAFEIW+K+VGVP + I R+ DNFW+ G TGPCGPCSEI+YD H G
Sbjct: 133 VTVYHEDDEAFEIWSKQVGVPEDRIIRIATADNFWSMGDTGPCGPCSEIFYDHGEHIWGG 192
Query: 226 CSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYE 285
D RFIE +NLVFMQYN+ DG++EPL +++DTG+GLERI+ I+Q V +NYE
Sbjct: 193 PPGSPEEDGDRFIEIWNLVFMQYNRHADGTMEPLPMQSVDTGMGLERISAIMQGVHSNYE 252
Query: 286 TDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVR 345
DL +IK A+++ + + D + +L+++ DH+R+ +L++DGV PSN GRGYV+R
Sbjct: 253 IDLFQALIKAAAQVTD-----AQDLEDKSLRVVADHIRSCAFLIADGVMPSNEGRGYVLR 307
Query: 346 RLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKR- 404
R+IRRAVR G LG KG L A + E EL ++Q I+E++ R
Sbjct: 308 RIIRRAVRHGNKLGAKGAFFYKLVAALAEQMGEAYPEL---------VKQQAIIEKVLRI 358
Query: 405 EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAE 464
EE +F +TL+RG +L+ L T G V + G F LYDT+GFP ++T +VA
Sbjct: 359 EEDQFGKTLDRGLTILEDSL------TGIEGDV--IPGDLVFKLYDTYGFPADLTADVAR 410
Query: 465 EHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKI---PDTEFLGYDTLSAK 521
E +++D +GF ME QR+++QAA AD E++ +T+F GYD
Sbjct: 411 ERFMTIDERGFQACMEEQRKKAQAAGKF-------GADYNERLKSDKNTDFKGYDAEHYT 463
Query: 522 AIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEV 581
V + G+ + G V+L+RTPFYAESGGQ+GD G L V G V
Sbjct: 464 GTVVEIFKEGQHTNTLEDGEQGVVILDRTPFYAESGGQVGDIGVLKVANGE------FVV 517
Query: 582 KDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQ 641
D +K LG+ F H G + G + V + +A +D + R+R K +HTATHL+ AL+ ++G
Sbjct: 518 TDTQK-LGNAFAHHGHVV-GRIGVNDKADARIDAERRERVKKNHTATHLVHKALRDLLGD 575
Query: 642 ETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAG 701
+Q GSLV DRLRFDF+ + +L+++E +N I LQT++M +D AK G
Sbjct: 576 HVTQKGSLVLPDRLRFDFSHFEGVTKAQLQQVEDAVNAEIRRNFALQTELMDIDAAKDKG 635
Query: 702 AIAMFGEKYGEQVKISS 718
A+A+FGEKY ++V++ S
Sbjct: 636 AMALFGEKYDDEVRVVS 652
>gi|302335910|ref|YP_003801117.1| alanyl-tRNA synthetase [Olsenella uli DSM 7084]
gi|301319750|gb|ADK68237.1| alanyl-tRNA synthetase [Olsenella uli DSM 7084]
Length = 880
Score = 546 bits (1408), Expect = e-152, Method: Compositional matrix adjust.
Identities = 299/672 (44%), Positives = 422/672 (62%), Gaps = 32/672 (4%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQRC 112
IR+ +L F+ S+G ++ PS+SLVPEDP++LLT AGM QFK + G + A + Q+C
Sbjct: 13 IREDYLRFFESKGCRLYPSSSLVPEDPSLLLTNAGMNQFKEYYQGTKTMREIGATSCQKC 72
Query: 113 IRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTV--EFGLPANRLWISV 170
+RTND++N+G SRH +FFEMLGNFSFG Y K +AI WAWEF T GLP +RL+++V
Sbjct: 73 LRTNDIDNIG-DSRHLSFFEMLGNFSFGGYTKADAIAWAWEFITAAEHLGLPKDRLYMTV 131
Query: 171 YEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSDVD 230
+EDDDEA E+W+ + GV +HI R+G +DNFW +G TGPCGPCSEIY+D P
Sbjct: 132 FEDDDEAIELWHAQ-GVAYDHISRLGEEDNFWAAGPTGPCGPCSEIYFDQGP--AFEGER 188
Query: 231 LGDD-TRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDLI 289
GDD R++EF+NLVF QY++++DGS+ L +NIDTG+GLERIA I+Q +NYE D++
Sbjct: 189 PGDDGERYLEFWNLVFTQYDRQEDGSMPELPHRNIDTGMGLERIAAIMQHEGSNYEGDVL 248
Query: 290 FPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLIR 349
+I +LA V Y + T+ +L+I+ DH RA+ +++ DG+ PSN GRGYV+RRL+R
Sbjct: 249 RTLIGVGEQLAGVRY-REGAATDTSLRILADHSRAVTFMIGDGILPSNEGRGYVLRRLLR 307
Query: 350 RAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELRF 409
RAV GRL+G+ G +FLP+ A + L + + + I + EE RF
Sbjct: 308 RAVYHGRLMGVHG--------SFLPTYAHEVTRLMADVYPQLVENQALIDGIISAEEERF 359
Query: 410 VQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGVS 469
TL+ GE L AL R ++G LSG+ AF L+DT+GFP+++T+E+A G
Sbjct: 360 GATLDAGEG----NLTAALGRL-DAGEA--LSGEVAFRLHDTYGFPIDLTREIAAAAGHE 412
Query: 470 VDMKGFDIEMENQRRQSQAAHN--AVKLSVDDSADLAEKIPDTEFLGYDTLSAK-AIVES 526
VDM FD M QR +++ A N A S + L++++ +TEF GYD + + A V +
Sbjct: 413 VDMAAFDGAMAKQRERARQAANRDAWGASNNVWVSLSDRLGETEFCGYDEDTVEGARVLA 472
Query: 527 LLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVKK 586
++ +G V +G VEV+L+RT FY E GGQ GD G L + A + V D K
Sbjct: 473 IVRDGSEVDVACRGEHVEVVLDRTSFYGEMGGQQGDSGKLVC------EDATLAVSDAKH 526
Query: 587 SLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQA 646
G H G + G L VG V A++D R+ + +HTATHLL AALK+V+G SQA
Sbjct: 527 RDGGFVSHVGEVTAGELRVGESVRAVIDHGRRELIRRNHTATHLLDAALKRVLGDHVSQA 586
Query: 647 GSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAMF 706
GSLV RLRFDF + E+ +E ++N I A + T VM +++AK +GA+A+F
Sbjct: 587 GSLVGPSRLRFDFTHFEAMSAEEMARVEGMVNAEIFAAEPVVTTVMGIEEAKASGAVALF 646
Query: 707 GEKYGEQVKISS 718
GEKYG+ V++ S
Sbjct: 647 GEKYGDVVRVVS 658
>gi|91202499|emb|CAJ72138.1| strongly similar to alanyl-tRNA synthetase [Candidatus Kuenenia
stuttgartiensis]
Length = 885
Score = 546 bits (1408), Expect = e-152, Method: Compositional matrix adjust.
Identities = 285/677 (42%), Positives = 419/677 (61%), Gaps = 32/677 (4%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR +FL F+ + H + P SLVP+ D T+L T AGM QFK +FLGK + RA T Q+
Sbjct: 6 IRNKFLTFFEKKSHVIWPGDSLVPQGDATLLFTGAGMNQFKDMFLGKGRLNIKRATTCQK 65
Query: 112 CIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWISVY 171
C+RT D+ENVGRT+ HHTFFEMLGNFSFGDYFK+E I WAWEF E LP +L++SVY
Sbjct: 66 CLRTGDLENVGRTASHHTFFEMLGNFSFGDYFKRETIAWAWEFLVQELRLPEEKLFVSVY 125
Query: 172 EDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNS-----GATGPCGPCSEIYYDFHPDRGC 226
+DD E++EIW K + + I G +DNFW + G GPCGPCSEI+YD GC
Sbjct: 126 KDDPESYEIWEKHIRILKSKIYSYGENDNFWPANAPAQGPNGPCGPCSEIFYDQGAGVGC 185
Query: 227 SDVDL---GDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNN 283
+ D RF+E +NLVF Q+++K+DG LEPL KN+DTG+GLER+AR++Q VP N
Sbjct: 186 GREECEPACDCDRFVEIWNLVFTQFDRKEDGRLEPLPNKNVDTGMGLERMARVMQGVPTN 245
Query: 284 YETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYV 343
++ D+ P+IK ++ ++ Y + + ++ I DH++A ++ ++DGV P N GRGYV
Sbjct: 246 FDIDIFAPVIKSIEDITHLRYHDKKENA-VCMRRIADHVKASIFCIADGVLPGNEGRGYV 304
Query: 344 VRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELK 403
RRL+RRA+R G LG+K FL + +L D+K R + I +K
Sbjct: 305 ERRLLRRAIRDGAQLGLK--------ECFLYKLVPIISDLMQDYYPDIKQRRENIARIIK 356
Query: 404 REELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVA 463
EE +F++TLE G L +++ T + + L G++AF LYDT+GFP+++T+ +
Sbjct: 357 SEEEKFLETLELGTVRLKELMD-----TMQKNKIKELPGKEAFKLYDTYGFPLDMTELIL 411
Query: 464 EEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDS--ADLAEKIPDTEFLGYDTLSAK 521
+EHG S+D G ++E++ QR Q++++ + D + E T FLGY+ S +
Sbjct: 412 KEHGFSMDSAGVEVELKRQRMQARSSSSMTGQVFDAGFLGKIKEISKGTTFLGYEKDSCR 471
Query: 522 AIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEV 581
A + +++ + K GS+V ++L++TPFY ESGGQIGD G L ++G++ + +
Sbjct: 472 ARIIAIVQGDYLIEKAEAGSEVSIVLDQTPFYGESGGQIGDTGILE-SEGSH-----ICI 525
Query: 582 KDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQ 641
D KK+ S +H G I +G++ G ++A +D R K +HTATH+L L+ VIG+
Sbjct: 526 TDTKKN-DSFIIHIGKITKGIVRTGDMIDARIDTHRRGLIKRNHTATHVLHWVLRNVIGR 584
Query: 642 ETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAG 701
QAGS+V+ DRLRFDF+ L E+ IE L+N I + L+ K L +A+ AG
Sbjct: 585 HAEQAGSMVSPDRLRFDFHHFSSLTKEEINRIEDLVNEKIMENALVSVKEQTLQEARNAG 644
Query: 702 AIAMFGEKYGEQVKISS 718
A+A+FGEKY E+V++ S
Sbjct: 645 AVALFGEKYEERVRMVS 661
>gi|410662606|ref|YP_006914977.1| alanyl-tRNA ligase [Simiduia agarivorans SA1 = DSM 21679]
gi|409024963|gb|AFU97247.1| alanyl-tRNA ligase [Simiduia agarivorans SA1 = DSM 21679]
Length = 875
Score = 546 bits (1408), Expect = e-152, Method: Compositional matrix adjust.
Identities = 293/685 (42%), Positives = 430/685 (62%), Gaps = 54/685 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR FL F+ S+GH ++PS+SL+P DPT+L T AGM+QFK +FLG R RA +SQR
Sbjct: 6 IRDAFLKFFESKGHAIVPSSSLIPGNDPTLLFTNAGMVQFKDVFLGDDKRPYTRAVSSQR 65
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFST--VEFGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK+E I +AWEF T +P +
Sbjct: 66 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRETIGYAWEFLTGAEHLAIPKEK 125
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VY++D EA++IW+KE+GVP E I R+G A DNFW G TGPCGPCSEI+Y
Sbjct: 126 LWVTVYDEDQEAYDIWHKEIGVPAERIIRIGDNKGAKYASDNFWAMGDTGPCGPCSEIFY 185
Query: 219 DFHPD-----RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERI 273
D P+ G D D GD R+IE +N VFMQ+N+ DG + PL + ++DTG+GLERI
Sbjct: 186 DHGPEVAGGPPGSPDED-GD--RYIEIWNNVFMQFNRTPDGVMHPLPKPSVDTGMGLERI 242
Query: 274 ARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGV 333
+ ++Q V +NYE DL +++ A++ + D +N +L++I DH+R+ +L+ DG+
Sbjct: 243 SAVMQHVHSNYEIDLFQNLLQAAAKATG-----TTDLSNQSLRVIADHIRSCAFLVVDGI 297
Query: 334 FPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKA 393
PSN GRGYV+RR++RRA+R G LG + + F +A A E+ V+
Sbjct: 298 VPSNEGRGYVLRRIMRRAIRHGHKLGQQ-------QPFFHTLVAALADEMGAAYPELVE- 349
Query: 394 REQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFG 453
++ I + L EE +F +TL++G +LDQ LA T L G F LYDT+G
Sbjct: 350 QQAHITKVLLAEEEQFAKTLDKGMAVLDQALAQLKGDT--------LDGLTVFSLYDTYG 401
Query: 454 FPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFL 513
FPV++T ++A E G+ +DM ++ M+ QR +++AA + K+ +S L T+F
Sbjct: 402 FPVDLTADIARERGLKLDMAAYESAMQAQRERARAA-GSFKVDYSNSLKLDGA---TDFT 457
Query: 514 GYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTN 573
GYD L+ + V ++L V + G ++++ TPFYAESGGQ GD G+L +
Sbjct: 458 GYDALAGEGKVVAILKGSDTVASLQAGEQGAIVMDVTPFYAESGGQAGDTGYL------S 511
Query: 574 QQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQA 633
A EV+D K G +H G +++GV++VG + A VD +R ++H+ATHLL A
Sbjct: 512 AAGARFEVQDCTKQAGH-HIHHGILQDGVIKVGDTLGAEVDANVRGDTVLNHSATHLLHA 570
Query: 634 ALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMA 693
AL+K++G+ +Q GSLV +RLRFDF+ + + EL IE+++N + + + + T V
Sbjct: 571 ALRKLLGEHVTQKGSLVTAERLRFDFSHNEAVKPAELAAIEQMVNEQVRNNSEVHTDVCD 630
Query: 694 LDDAKRAGAIAMFGEKYGEQVKISS 718
++ AK GA+A+FGEKYG++V++ S
Sbjct: 631 MEQAKAKGAMALFGEKYGDEVRVLS 655
>gi|427426236|ref|ZP_18916300.1| alanine--tRNA ligase [Acinetobacter baumannii WC-136]
gi|425697022|gb|EKU66714.1| alanine--tRNA ligase [Acinetobacter baumannii WC-136]
Length = 883
Score = 546 bits (1408), Expect = e-152, Method: Compositional matrix adjust.
Identities = 299/683 (43%), Positives = 429/683 (62%), Gaps = 50/683 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FL ++ ++GH + S+SLVP DPT+L T AGM QFK FLG R RA TSQ+
Sbjct: 11 IREAFLRYFETQGHTRVASSSLVPANDPTLLFTNAGMNQFKDCFLGLEKRDYVRATTSQK 70
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND++NVG T+RHHTFFEMLGNFSFGDYFK++A+++AWEF T E LP ++
Sbjct: 71 CVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKRDALKFAWEFLTSEQWLALPKDK 130
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
L+ +VY DDEA++IWNKE+G+ E I R+G A DNFW G TGPCGPCSEI++
Sbjct: 131 LYATVYHTDDEAYDIWNKEIGLAPERIIRIGDNKGEKYASDNFWAMGDTGPCGPCSEIFF 190
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D RFIE +N VFMQ+N+ DG L PL ++DTG+GLERI+
Sbjct: 191 D-HGDHIWGGLPGTPEEDGDRFIEIWNNVFMQFNRTADGVLHPLPAPSVDTGMGLERISA 249
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL ++K A+ + + D+ +L+++ DH R+ +L++DGV P
Sbjct: 250 VLQHVNSNYDIDLFQHLLKAAANIIGIE-----DQGQPSLRVVADHARSCCFLIADGVNP 304
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN GRGYV+RR+IRRAVR G LG G F + + IE+ ++ AR+
Sbjct: 305 SNEGRGYVLRRIIRRAVRHGNKLGATG--------TFFYKMLQPLIEVMGDAYPELAARK 356
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
I L REE +F +TLE+G KLL+ LA +T + G F LYDT+GFP
Sbjct: 357 DVIEATLIREEEQFAKTLEQGLKLLEGELAQLKDKT--------IPGATVFKLYDTYGFP 408
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGY 515
++T ++A E +D GF++EM QR Q A +A K +VD + ++ + +T+F GY
Sbjct: 409 TDLTADIARERDFIIDEAGFEVEMAAQR---QRARDAGKFAVDYN-NIVKVEGETQFDGY 464
Query: 516 DTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
+ + + ++ +G V +VS+G + ++LN+TPFYAESGGQIGD G +
Sbjct: 465 INTTGQGQIVAIYKDGVQVDEVSEGDEALIVLNQTPFYAESGGQIGDTGIF------KNE 518
Query: 576 TAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAAL 635
T + EV+D KKS G FVH+G + G L+ + VEAIV +R+ +H+ATHLL AAL
Sbjct: 519 TGIFEVQDTKKS-GGAFVHQGIVTVGSLKADQNVEAIVKADIREATARNHSATHLLHAAL 577
Query: 636 KKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALD 695
++++G Q GSLVA D LRFDF +P+ +L+++ERL+N I + + T+++ ++
Sbjct: 578 RQILGSHVQQKGSLVASDILRFDFANDQPVTFEQLQQVERLVNAEIIANSAVTTELLDIE 637
Query: 696 DAKRAGAIAMFGEKYGEQVKISS 718
AK GA+ +FGEKYG++V++ S
Sbjct: 638 AAKAKGAMMLFGEKYGDEVRVLS 660
>gi|284007755|emb|CBA73582.1| alanyl-tRNA synthetase [Arsenophonus nasoniae]
Length = 899
Score = 546 bits (1408), Expect = e-152, Method: Compositional matrix adjust.
Identities = 296/682 (43%), Positives = 425/682 (62%), Gaps = 48/682 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ ++GH+++PS+SLVP DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 31 IRQAFLDFFHTKGHEIVPSSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRAYSRATTAQR 90
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI++AWE T E F LP R
Sbjct: 91 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAIKYAWELLTSEQWFNLPKER 150
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VY D+ A++IW +E+G+P+E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 151 LWVTVYHTDEAAYKIWQQEIGIPIERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFY 210
Query: 219 DF--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARI 276
D H G D R+IE +N+VFMQ+N++ DGSL+ L ++DTG+GLERIA +
Sbjct: 211 DHGEHILGGPPGSPEEDGDRYIEIWNIVFMQFNRQSDGSLKALPTPSVDTGMGLERIAAV 270
Query: 277 LQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPS 336
LQ V +NYE DL +I ++ +S D N +L++I DH+R+ +L+ DGVFP+
Sbjct: 271 LQHVNSNYEIDLFRQLIASIAKAVALS-----DLNNKSLRVIADHIRSSAFLIGDGVFPA 325
Query: 337 NIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQ 396
N GRGYV+RR+IRRAVR G +LG K L + + + A EL +H +
Sbjct: 326 NEGRGYVLRRIIRRAVRHGYMLGAKETFFYKLVAPLIQVMGDTADELKSH--------QA 377
Query: 397 RILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPV 456
I + LK EE +F +TL RG +LLD LA T L+G+ AF LYDT+GFP
Sbjct: 378 TIEKTLKNEEEQFARTLARGLQLLDDELAQLQGDT--------LAGEIAFRLYDTYGFPF 429
Query: 457 EITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYD 516
++T +V E + VD GF+ ME QR +++ + D D+ + ++F GY+
Sbjct: 430 DLTADVCRERNIKVDEAGFNAAMEQQRYRARESSGFAT----DYNDVIKVDSHSDFSGYE 485
Query: 517 TLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQT 576
+ +A V ++ +GK V +++G + ++L++T FYAESGGQ+GD G L + G Q
Sbjct: 486 NNNQQATVIAIFHHGKSVNVLNQGEEGIIILDKTSFYAESGGQVGDSGILSNSHG---QF 542
Query: 577 AVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALK 636
AV + + +++G H G + G + V VEA +D + R +++H+ATHLL AAL+
Sbjct: 543 AVSDTQKYAQAIG----HLGKVITGSITVNNSVEAKIDIERRNAIRLNHSATHLLHAALR 598
Query: 637 KVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDD 696
V+G+ SQ GSLV LRFDF+ + ++ +IE ++N I + + T +M LD
Sbjct: 599 DVLGEHVSQKGSLVNEKYLRFDFSHFAAMTPKQIRQIEDIVNCQIRKNDPIITTLMDLDA 658
Query: 697 AKRAGAIAMFGEKYGEQVKISS 718
AK GA+A+FGEKY +V++ S
Sbjct: 659 AKEKGAMALFGEKYDAKVRVLS 680
>gi|288933924|ref|YP_003437983.1| alanyl-tRNA synthetase [Klebsiella variicola At-22]
gi|290510997|ref|ZP_06550366.1| alanyl-tRNA synthetase [Klebsiella sp. 1_1_55]
gi|288888653|gb|ADC56971.1| alanyl-tRNA synthetase [Klebsiella variicola At-22]
gi|289775990|gb|EFD83989.1| alanyl-tRNA synthetase [Klebsiella sp. 1_1_55]
Length = 875
Score = 546 bits (1408), Expect = e-152, Method: Compositional matrix adjust.
Identities = 307/687 (44%), Positives = 433/687 (63%), Gaps = 62/687 (9%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTAQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI++AWE T E F LP +
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAIKYAWELLTGENWFALPKEK 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEAF+IW EVGVP E I R+G A DNFW G TGPCGPC+EI++
Sbjct: 128 LWVTVYETDDEAFDIWANEVGVPRERIIRIGDNKGAPFASDNFWQMGDTGPCGPCTEIFF 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +I +++ + D TN +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRDLIASVAKVTGAT-----DLTNKSLRVIADHIRSCAFLIADGVIP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRA+R G +LG K F + I + ++K ++
Sbjct: 302 SNENRGYVLRRIIRRAIRHGNMLGAKD--------TFFWKLVAPLIAVMGSAGEELKQQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ L+ T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELSKLKGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQ------AAHNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRARESSGFGADYNAM-IRVDGV--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD L V +L ++GK V VS G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDHLELNGKVTALFIDGKAVDSVSAGQEAVVILDQTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G AV + + +++G H G + G L+VG V+A VD RQR +++H+ATH
Sbjct: 513 KGAGFSFAVSDTQKYGQAIG----HIGKVASGSLKVGDAVQADVDEARRQRIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G +Q GSLV LRFDF+ + E+ +E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVAQKGSLVNDKALRFDFSHFEAMKPEEIRAVEDLVNAQIRRNLAIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKI 716
+M +D A+ +GA+A+FGEKY ++V++
Sbjct: 629 NIMDIDAARASGAMALFGEKYDDRVRV 655
>gi|348029734|ref|YP_004872420.1| alanyl-tRNA synthetase [Glaciecola nitratireducens FR1064]
gi|347947077|gb|AEP30427.1| alanyl-tRNA synthetase [Glaciecola nitratireducens FR1064]
Length = 863
Score = 546 bits (1408), Expect = e-152, Method: Compositional matrix adjust.
Identities = 306/677 (45%), Positives = 431/677 (63%), Gaps = 54/677 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
+R+ F +++ H+++PS+SLVP +DPT+L T AGM QFK +FLG R RA +SQR
Sbjct: 8 LRRTFFEYFQQHQHQLVPSSSLVPHDDPTLLFTNAGMNQFKDVFLGAEQRSYTRAVSSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK+EAI++AW+F T E GL ++L
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKEEAIKFAWQFLTGELGLEKDKLL 127
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDF--HPDRG 225
++VY +DDEAF+IW +++G+P E I R+ DNFW+ G TGPCGPCSEI+YD H G
Sbjct: 128 VTVYHEDDEAFDIWEQKIGIPAERIIRIATSDNFWSMGDTGPCGPCSEIFYDHGEHIWGG 187
Query: 226 CSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYE 285
D RFIE +NLVFMQ+N++ +G + PL + +IDTG+GLERI+ ILQ V +NYE
Sbjct: 188 PPGSAEEDGDRFIEIWNLVFMQFNRQQNGDMLPLPKPSIDTGMGLERISAILQNVHSNYE 247
Query: 286 TDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVR 345
DL +I A+++ + D + +L++I DH+R+ +L+ DGV PSN GRGYV+R
Sbjct: 248 IDLFQSLIASAAKIVG-----TEDLEDKSLRVIADHIRSCSFLICDGVMPSNEGRGYVLR 302
Query: 346 RLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEE-LKR 404
R+IRRAVR G LG L + + E EL ++Q ++E+ LK
Sbjct: 303 RIIRRAVRHGYKLGANDIFFYKLVNTLVDEMGEAYPELK---------QQQAVVEKVLKT 353
Query: 405 EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAE 464
EE +F +TL RG +L+ DALS S ++ G+ F LYDT+GFP ++T +VA
Sbjct: 354 EEEQFSKTLARGMLILN----DALSEL----SGKQVPGELVFKLYDTYGFPADLTNDVAR 405
Query: 465 EHGVSVDMKGFDIEMENQRRQSQ-----AAHNAVKLSVDDSADLAEKIPDTEFLGYDTLS 519
E G+++D +GF+ M Q+ QSQ A A LSV+ TEF GY +S
Sbjct: 406 EQGLTIDEEGFEAAMAQQKSQSQSASKFGADYANVLSVEHK---------TEFTGYSEVS 456
Query: 520 AKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVV 579
+ V ++V+ K V + S + +LL +TPFYAESGGQ GD G ++ T + T V
Sbjct: 457 GMSTVVDIIVDNKAVGEAS--DEALLLLEKTPFYAESGGQTGDTGL--ISSSTGKATVVD 512
Query: 580 EVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVI 639
VK LGS F H+ I EG+++VG +VE ++D + R R K +H+ATHLL AAL+K++
Sbjct: 513 TVK-----LGSAFAHRVKI-EGLIKVGDKVELLIDGERRDRIKANHSATHLLHAALRKLL 566
Query: 640 GQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKR 699
G +Q GSLV ++LRFDF+ + +L EIE L+N I N L T++M LD+AK
Sbjct: 567 GDHVTQKGSLVDAEKLRFDFSHFESISAKQLIEIENLVNAEIRSNNALSTQLMDLDEAKA 626
Query: 700 AGAIAMFGEKYGEQVKI 716
+GA+A+FGEKY E+V++
Sbjct: 627 SGAMALFGEKYDEKVRV 643
>gi|149911059|ref|ZP_01899687.1| alanyl-tRNA synthetase [Moritella sp. PE36]
gi|149805885|gb|EDM65873.1| alanyl-tRNA synthetase [Moritella sp. PE36]
Length = 873
Score = 546 bits (1408), Expect = e-152, Method: Compositional matrix adjust.
Identities = 306/680 (45%), Positives = 425/680 (62%), Gaps = 50/680 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR FLD++AS+GH S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRNAFLDYFASKGHNKGTSSSLVPANDPTLLFTNAGMNQFKDVFLGAEQRSYTRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
C+R ND++NVG T+RHHTFFEMLGNFSFGDYFK++AI +AWEF TV +P +L
Sbjct: 68 CVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKEDAILFAWEFLTVVLKIPKEKLL 127
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMG--------ADDNFWNSGATGPCGPCSEIYYD 219
++VYE D+EAF W +VGVP + I R+G DNFW+ G TGPCGPCSEI+YD
Sbjct: 128 VTVYESDNEAFSFWANKVGVPEDKIIRIGDKSPEKKFESDNFWSMGDTGPCGPCSEIFYD 187
Query: 220 FHPD--RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARIL 277
D G D RFIE +NLVFMQ+N++ DG++E L + ++DTG+GLERIA I+
Sbjct: 188 HGEDIWGGVPGSPEEDGDRFIEIWNLVFMQFNRQADGTMEELPKPSVDTGMGLERIAAIM 247
Query: 278 QKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSN 337
Q V +NYE D+ +IK +EL + D + +L++I DH+RA +L+SDGV PSN
Sbjct: 248 QNVHSNYEIDIFQSLIKHVAELIG-----TTDLEHKSLRVIADHIRACSFLISDGVMPSN 302
Query: 338 IGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQR 397
GRGYV+RR+IRRAVR G LG K G F + K +EL I D+ ++Q
Sbjct: 303 EGRGYVLRRIIRRAVRHGNKLGAK--------GPFFNKLVAKMVELMGDISDDL-VKQQA 353
Query: 398 ILEE-LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPV 456
I+E+ L EE +F +TLERG +LD L+ + VP G F LYDT+GFP
Sbjct: 354 IVEKILLIEEEQFGKTLERGLNILDNELSQLDGKV-----VP---GDVVFKLYDTYGFPS 405
Query: 457 EITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYD 516
++T ++A E +++D GF ME QR +++ N D ++ + TEFLGY
Sbjct: 406 DLTADIARERELTIDEDGFKTAMEAQRNRARQGSNFGT----DYNEMLKIDAKTEFLGYQ 461
Query: 517 TLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQT 576
TL++ A + +L+ + V ++ G + ++LN+TPFYAE+GGQ GD G + +
Sbjct: 462 TLTSDAQIVALIKDNAEVELLNDGQEGAIVLNKTPFYAEAGGQSGDQGVIKIGD------ 515
Query: 577 AVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALK 636
AV V D KK+ G+ +H G++ GV+EV +V A VD R+ ++H+ THL AAL+
Sbjct: 516 AVFTVTDTKKA-GNATIHFGSV-SGVIEVNSQVIADVDVSRRKAIGLNHSVTHLAHAALR 573
Query: 637 KVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDD 696
KV+G Q GSLV +RLRFDF+ + +L E+ERL+N I + + T+VM +D
Sbjct: 574 KVVGDNVQQKGSLVLPERLRFDFSHFEGVTPAQLIEVERLVNAQIRANHEVVTEVMDIDA 633
Query: 697 AKRAGAIAMFGEKYGEQVKI 716
A+ AGA+A+FGEKY ++V++
Sbjct: 634 AREAGAMALFGEKYDDEVRV 653
>gi|393768171|ref|ZP_10356712.1| alanyl-tRNA synthetase [Methylobacterium sp. GXF4]
gi|392726295|gb|EIZ83619.1| alanyl-tRNA synthetase [Methylobacterium sp. GXF4]
Length = 895
Score = 546 bits (1408), Expect = e-152, Method: Compositional matrix adjust.
Identities = 307/683 (44%), Positives = 427/683 (62%), Gaps = 45/683 (6%)
Query: 51 DSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATS 109
+ IR FLD++A GH+ +PS+SLVP+ DPT++ T AGM+QFK +F G R RA T+
Sbjct: 5 NEIRSTFLDYFARAGHEAVPSSSLVPKNDPTLMFTNAGMVQFKNVFTGVEKRAYDRATTA 64
Query: 110 QRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANR 165
Q+C+R ND++NVG T+RHHTFFEMLGNFSFGDYFK AI+ AW T EFGL +R
Sbjct: 65 QKCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKDRAIELAWTLITKEFGLKPDR 124
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHP--- 222
L ++VY DDDEA +W K G + I R+G DNFW G TGPCGPCSEI+ D P
Sbjct: 125 LLVTVYADDDEAANLWKKIAGFSDDKIIRIGTSDNFWQMGDTGPCGPCSEIFIDQGPALQ 184
Query: 223 --DRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKV 280
G D D GD RF+EF+NLVFMQY + + G PL + +IDTG+GLER+A ILQ V
Sbjct: 185 GGPPGSPDED-GD--RFLEFWNLVFMQYEQLEPGMRNPLPRPSIDTGMGLERMAAILQGV 241
Query: 281 PNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGR 340
+NY+TDL +I +A+ T + ++I DHLRA +L++DGV P N GR
Sbjct: 242 HSNYDTDLFKALIDA---VAHAVSRAPEPATMASYRVIADHLRASSFLVADGVLPGNEGR 298
Query: 341 GYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILE 400
GYV+RR++RRA+R +LG + L + + + EL ++A E I E
Sbjct: 299 GYVLRRIMRRAMRHAEILGAREPTMYRLVPTLVREMGQAYPEL-------MRA-EALIGE 350
Query: 401 ELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITK 460
LK EE RF +TLERG +LD S +R+ S +LSG+ AF LYDT+GFP+++T+
Sbjct: 351 TLKLEETRFRRTLERGLSILD-------SESRDLKSGDKLSGETAFTLYDTYGFPLDLTQ 403
Query: 461 EVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-----LAEKIPDTEFLGY 515
+ + G+ VD + F M+ RQ QAA A K S + + + + E++ TEFLGY
Sbjct: 404 DALKARGIGVDTEAFTAAMQ---RQKQAAREAWKGSGEAATETVWFGIRERVGATEFLGY 460
Query: 516 DTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
+T +A+ IV +LL +G V + G VL+N+TPFYAESGGQ+GD G L ++ G +
Sbjct: 461 ETEAAEGIVTALLRDGAEVKSLEAGQTGLVLVNQTPFYAESGGQVGDTG-LILSAGLRAR 519
Query: 576 TAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAAL 635
V D +K LG +FVH ++ EG+L + + VE VD R+ + +H+ATHLL AL
Sbjct: 520 -----VTDTEKKLGDLFVHHVSVEEGILSLDQPVELKVDHARRKAIRANHSATHLLHEAL 574
Query: 636 KKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALD 695
++V+G +Q GSLV+ DRLRFD + +P+ EL +E + N + + TK+MA+D
Sbjct: 575 RQVLGDHVAQKGSLVSPDRLRFDISHPKPIEADELARVEDIANAVLLQNAPVVTKLMAVD 634
Query: 696 DAKRAGAIAMFGEKYGEQVKISS 718
DA +GA A+FGEKYG++V++ S
Sbjct: 635 DAIASGARALFGEKYGDEVRVVS 657
>gi|320539040|ref|ZP_08038714.1| alanyl-tRNA synthetase [Serratia symbiotica str. Tucson]
gi|320030880|gb|EFW12885.1| alanyl-tRNA synthetase [Serratia symbiotica str. Tucson]
Length = 875
Score = 546 bits (1408), Expect = e-152, Method: Compositional matrix adjust.
Identities = 316/689 (45%), Positives = 430/689 (62%), Gaps = 66/689 (9%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRAYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK EAI +AWE T E F LP +
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHEAISYAWELLTGEDWFNLPKEK 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW+++YE DDEAF+IW K +GVP E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTIYETDDEAFDIWQKHIGVPAERIIRIGYNKGAAFASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR------GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLER 272
D H D G ++ D GD R+IE +N+VFMQ+N++ DG++ PL + ++DTG+GLER
Sbjct: 188 D-HGDHIWGGPPGSAEED-GD--RYIEIWNIVFMQFNRQSDGAMLPLPKPSVDTGMGLER 243
Query: 273 IARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDG 332
IA +LQ V NYE DL +I S +A V+ A D N +L++I DH+RA +L+SDG
Sbjct: 244 IAAVLQHVNANYEIDLFRTLI---SVVAKVTGA--TDLDNKSLRVIADHIRACAFLVSDG 298
Query: 333 VFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVK 392
V PSN RGYV+RR+IRRA+R G +LG K F + IE+ ++K
Sbjct: 299 VSPSNESRGYVLRRIIRRAIRHGNMLGAKD--------TFFYKLVVPLIEVMGSAADELK 350
Query: 393 AREQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTF 452
++ R+ + LK EE +F +TLERG LLD L T L G+ AF LYDTF
Sbjct: 351 RQQSRVEQVLKTEEEQFARTLERGLALLDDELNKLQGET--------LDGEIAFRLYDTF 402
Query: 453 GFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQ-----AAHNAVKLSVDDSADLAEKI 507
GFPV++T +V E G+ VD GF ME QRR+++ A + VD S
Sbjct: 403 GFPVDLTADVCRERGLKVDEAGFQQAMEAQRRRARESSGFCADYNTMIRVDGS------- 455
Query: 508 PDTEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLY 567
+ F GYD +A+V +L +G+PV +++ G + V+L+ TPFY ESGGQ+GD G L
Sbjct: 456 --SRFSGYDYEEQQAMVIALFRDGQPVEQINAGEEAVVVLDGTPFYGESGGQVGDKGVLK 513
Query: 568 VTQGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTA 627
+ A V D +K G H G + +G L+V V+A +D + R R +++H+A
Sbjct: 514 AAR------ADFVVSDTQK-YGQATGHLGKLSQGSLKVKDRVDAQIDTERRNRIRLNHSA 566
Query: 628 THLLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLL 687
THLL AAL++ +G+ +Q GSLV LRFDF+ + + ++ +E L+N + L+
Sbjct: 567 THLLHAALRQTLGEHVAQKGSLVNDKYLRFDFSHYEAMKPEQIRRVEDLVNQQVRRNLLV 626
Query: 688 QTKVMALDDAKRAGAIAMFGEKYGEQVKI 716
QT+VM+LDDAK GA+A+FGEKY + V++
Sbjct: 627 QTEVMSLDDAKEKGAMALFGEKYDDNVRV 655
>gi|376261750|ref|YP_005148470.1| alanine--tRNA ligase [Clostridium sp. BNL1100]
gi|373945744|gb|AEY66665.1| alanine--tRNA ligase [Clostridium sp. BNL1100]
Length = 879
Score = 546 bits (1407), Expect = e-152, Method: Compositional matrix adjust.
Identities = 288/672 (42%), Positives = 431/672 (64%), Gaps = 27/672 (4%)
Query: 51 DSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATS 109
+ +R+R+L F+ S+GH L SA LVP+ DP++LL +GM KP F G+ R T
Sbjct: 7 NELRERYLKFFESKGHLRLASAPLVPKNDPSLLLINSGMAPLKPFFTGQEEPPRKRVTTC 66
Query: 110 QRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWIS 169
Q+CIRT D+ENVG+T+RH T+FEMLGNFSFGDYFK EAI WAWEF T + +P +RLW++
Sbjct: 67 QKCIRTPDIENVGKTARHGTYFEMLGNFSFGDYFKNEAIPWAWEFVTEDLKMPVDRLWVT 126
Query: 170 VYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCS-- 227
+YEDDDEAF+IW+K VG+P E I RMG DNFW G TGPCGPCSEIY+D P++GC
Sbjct: 127 IYEDDDEAFDIWHKVVGLPAERIVRMGKKDNFWEHG-TGPCGPCSEIYFDRGPEKGCGSP 185
Query: 228 DVDLGDDT-RFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYET 286
D +G + R++EF+N VF Q+N+ + G+ L NIDTG+GLER+A I Q V N +E
Sbjct: 186 DCRVGCECDRYVEFWNNVFTQFNRDEQGNYTRLAHPNIDTGMGLERLACISQDVDNLFEV 245
Query: 287 DLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRR 346
D + I+ + A V Y +S ++T++++++I DH+R+ ++ DGV PSN GRGYV+RR
Sbjct: 246 DTVRNILDYICKTAGVEYKKS-EKTDVSIRVITDHIRSTTMMVCDGVLPSNEGRGYVLRR 304
Query: 347 LIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREE 406
L+RRA R GRLLGI FL +A I S ++ + + I + +K EE
Sbjct: 305 LLRRAARHGRLLGIN--------KPFLYDVAMVVINESKEAYPELAEKAEYIKKVIKIEE 356
Query: 407 LRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEH 466
RF T+++G +L++ + + ++ +E + G+ F L+DT+GFP+++T+E+AEE+
Sbjct: 357 ERFEATVDQGIVILNEFIDEIKAKKQEV-----IPGEMVFKLHDTYGFPLDLTREIAEEN 411
Query: 467 GVSVDMKGFDIEMENQRRQSQAAHNAVKLSV--DDSADLAEKIPDTEFLGYDTLSAKAIV 524
G+ +D GF EM++QR++++ AHN+ S D D +K T F+GY+ + ++ +
Sbjct: 412 GLGIDEDGFKKEMDSQRKKARDAHNSKDTSAWSDSVFDKLDKSQKTAFMGYENTACQSEI 471
Query: 525 ESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDV 584
L+ +G V V +G ++ V+L++TPFYAE GGQ+GD G L G V+++++
Sbjct: 472 LYLVKDGDIVDTVQEGDEITVILDKTPFYAEMGGQVGDSGVLTAKNG------VIKIENC 525
Query: 585 KKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETS 644
K+ F+H G + G++E G V A +D K R +HT THLL AL+ V+G
Sbjct: 526 TKTADGKFLHTGFVETGLVETGSTVTASIDEKRRIAINRNHTVTHLLHKALRTVLGDHVH 585
Query: 645 QAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIA 704
QAGSLV ++LRFDF+ + EL+++E + N I + + + M +D+AK+ GA+A
Sbjct: 586 QAGSLVEPNKLRFDFSHFSAMTPEELKKVEDMTNEAILSSMEVDVREMPIDEAKKLGAMA 645
Query: 705 MFGEKYGEQVKI 716
+FGEKYG V++
Sbjct: 646 LFGEKYGNTVRV 657
>gi|444917267|ref|ZP_21237370.1| Alanyl-tRNA synthetase [Cystobacter fuscus DSM 2262]
gi|444711244|gb|ELW52193.1| Alanyl-tRNA synthetase [Cystobacter fuscus DSM 2262]
Length = 897
Score = 546 bits (1407), Expect = e-152, Method: Compositional matrix adjust.
Identities = 291/690 (42%), Positives = 432/690 (62%), Gaps = 43/690 (6%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S IR+ FL F+ RGH+ + S+SLVP+ DPT+L T AGM+QFK +F G+ R RA
Sbjct: 6 SASQIREAFLQFFEGRGHRRVASSSLVPQNDPTLLFTNAGMVQFKDVFTGREKRDYSRAT 65
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
TSQ+C+R ND++NVG T+RHHTFFEMLGNFSFGDYFK +AI + WEF T GL
Sbjct: 66 TSQKCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKADAIAYGWEFVTKTLGLDT 125
Query: 164 NRLWISVYED------DDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIY 217
RL ++V+ D+EAFE+W K+ GVP E I ++G DNFW G TGPCGPCSEI+
Sbjct: 126 KRLAVTVFNGEGGVPWDEEAFELWAKQ-GVPRERIYKLGLKDNFWAMGDTGPCGPCSEIH 184
Query: 218 YDFHPDRGCSDVDLG--------DDTRFIEFYNLVFMQYNKKD-DGSLEPLKQKNIDTGL 268
+ D C++V G D R++E +NLVFMQ+ +K+ D L PL + +IDTG
Sbjct: 185 FHQGDDIPCAEVTAGRACQGVACDCDRWLEIWNLVFMQFERKEKDAPLIPLPKPSIDTGA 244
Query: 269 GLERIARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYL 328
GLERIA ++Q +NY+TDL II + SEL Y Q + +++++ DH RA +L
Sbjct: 245 GLERIASVVQGKRSNYDTDLFQSIISRVSELVGKRYTQED---GASMRVVADHARAAAFL 301
Query: 329 LSDGVFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHID 388
++DGV PSN GRGYV+RR++RRA+R G +LG L F + ++ IEL
Sbjct: 302 IADGVQPSNEGRGYVLRRIMRRAIRHGSILG--------LNELFFFKVVDRVIELMGDAY 353
Query: 389 SDVKAREQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLL 448
+++ ++E + EE F +TL+RG K++D+ +A + +++G +LSG D + L
Sbjct: 354 PELRDSRTFLIEVSRHEEESFRRTLDRGMKMIDESVA----KLKQAGE-KKLSGADIYYL 408
Query: 449 YDTFGFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIP 508
+ T+GFP ++T+ + E G D++GF E+E + +++ A + K + E++
Sbjct: 409 HGTYGFPWDLTEIILRERGFEADVEGFWKEIEKEALKNKFAGSGDKAVGAVYQQVLERVG 468
Query: 509 DTEFLGYDTLS--AKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFL 566
+EFLGY+ + + V ++L G V + G +VE++L+RTPFY ESGGQ+GD G +
Sbjct: 469 QSEFLGYEGVGHEGEGSVRAILKGGAEVPEAHAGDEVELVLDRTPFYGESGGQMGDTGRI 528
Query: 567 YVTQGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHT 626
G V +V D ++ + + VHK + EG L+ G V+A VD + R + +H+
Sbjct: 529 VAHGGKT----VAQVADAQRPVPGLVVHKAKVTEGTLKTGDMVQASVDGERRSSIRANHS 584
Query: 627 ATHLLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANL 686
ATHLL ALK V+G+ QAGS+VA D LRFDF+ P+ + +++E L+NGW+ +
Sbjct: 585 ATHLLHRALKLVLGEHVKQAGSVVAPDYLRFDFSHFSPMTPEQQDQVEDLVNGWVRENTE 644
Query: 687 LQTKVMALDDAKRAGAIAMFGEKYGEQVKI 716
QT++M+L++AK++GA+AMFGEKYGE V++
Sbjct: 645 SQTRIMSLEEAKKSGAVAMFGEKYGETVRV 674
>gi|392308530|ref|ZP_10271064.1| alanyl-tRNA ligase [Pseudoalteromonas citrea NCIMB 1889]
Length = 864
Score = 546 bits (1407), Expect = e-152, Method: Compositional matrix adjust.
Identities = 301/674 (44%), Positives = 426/674 (63%), Gaps = 42/674 (6%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLD++A++ H+++PS+SL+P D T+L AGM+QFK +FLG R RA +SQR
Sbjct: 6 IRQAFLDYFATQQHQIVPSSSLIPGNDATLLFNNAGMVQFKDVFLGAESRPYTRATSSQR 65
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK+EAI +AW+F T LP +L
Sbjct: 66 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQEAITFAWQFLTDVVKLPKEKLL 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDF--HPDRG 225
++VY D+EA++ W+KE+G+ + I R+ DNFW+ G TGPCGPCSEI+YD H G
Sbjct: 126 VTVYHTDEEAYDFWSKEIGLSDDKIIRIDTADNFWSMGDTGPCGPCSEIFYDHGEHIWGG 185
Query: 226 CSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYE 285
D RFIE +NLVFMQYN+ DGS+EPL ++++DTG+GLERIA ILQ V +NYE
Sbjct: 186 PPGSPEEDGDRFIEIWNLVFMQYNRHADGSMEPLPKQSVDTGMGLERIAAILQGVHSNYE 245
Query: 286 TDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVR 345
DL +IK A+ + N + D + +L+++ DH+R+ +L+SDGV PSN GRGYV+R
Sbjct: 246 IDLFQGLIKAAAVVTN-----AKDLEDKSLRVVADHIRSCAFLVSDGVMPSNEGRGYVLR 300
Query: 346 RLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKR- 404
R+IRRAVR G LG G L A + + + EL A++Q I+E++ R
Sbjct: 301 RIIRRAVRHGNKLGASGAFFYKLVAALIEQMGDAYPEL---------AKQQAIIEKVLRI 351
Query: 405 EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAE 464
EE +F +TLERG +L++ LA+ E +P G+ F LYDT+GFP ++T +VA
Sbjct: 352 EEEQFGKTLERGLAILEESLANI-----EGDVIP---GELVFKLYDTYGFPADLTADVAR 403
Query: 465 EHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTLSAKAIV 524
E +++D +GF ME QR+++Q A K D + L + T+F GYD V
Sbjct: 404 ERFMTIDERGFQDCMEVQRKKAQ---QAGKFGADYNEQLKSE-KSTDFKGYDAEHYTGTV 459
Query: 525 ESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDV 584
L G+ V + G + V+L+RTPFYAESGGQ+GD G L VT G V D
Sbjct: 460 IELFFEGQAVNVLEDGQEGIVVLDRTPFYAESGGQVGDSGTLTVTGGE------FAVADT 513
Query: 585 KKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETS 644
+K LG+ F H G + +G + + + +A +D + R R K +HT TH+L AL++++G +
Sbjct: 514 RK-LGNAFAHHGKV-QGRIGINDKADAQIDGERRDRIKKNHTGTHILHEALRQLLGDHVA 571
Query: 645 QAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIA 704
Q GSLV D+LRFDF+ + +L E+E +N I L T++M +DDAK GA+A
Sbjct: 572 QKGSLVMPDKLRFDFSHFEGVTKAQLRELEDAVNAEIRSNFALDTQLMDIDDAKAKGAMA 631
Query: 705 MFGEKYGEQVKISS 718
+FGEKY ++V++ S
Sbjct: 632 LFGEKYDDEVRVVS 645
>gi|311278355|ref|YP_003940586.1| alanyl-tRNA synthetase [Enterobacter cloacae SCF1]
gi|308747550|gb|ADO47302.1| alanyl-tRNA synthetase [Enterobacter cloacae SCF1]
Length = 875
Score = 546 bits (1407), Expect = e-152, Method: Compositional matrix adjust.
Identities = 310/689 (44%), Positives = 434/689 (62%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTAQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AI++AWE T + F LP +
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIKYAWELLTGDNWFALPKEK 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEAF+IW EVGVP E I R+G A DNFW G TGPCGPC+EI++
Sbjct: 128 LWVTVYETDDEAFDIWANEVGVPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFF 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +I+ +++ + D +N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRTLIQAVAKVTGAT-----DLSNKSLRVIADHIRSCAFLIADGVIP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRA+R G +LG K F + +E+ D+K ++
Sbjct: 302 SNENRGYVLRRIIRRAIRHGNMLGAKD--------TFFYKLVGPLVEVMGSAGDDLKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQILKTEEEQFARTLERGLALLDEELAKLSGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQ------AAHNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRARESSGFGADYNAM-IRVDGA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD L V +L V+GK V ++ G D V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDHLELNGKVTALFVDGKAVNSINAGQDAVVILDQTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G AV + + +++G H G + G L+VG V+A VD R R +++H+ATH
Sbjct: 513 KGAGFGFAVSDTQKYGQAIG----HLGKLSNGSLKVGDAVQADVDEVRRARIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL+ V+G +Q GSLV LRFDF+ + E+ +E L+N I ++T
Sbjct: 569 LMHAALRDVLGTHVAQKGSLVNDKALRFDFSHFEAMKPEEIRAVEDLVNAQIRRNLPVET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
VM L+DAK GA+A+FGEKY ++V++ S
Sbjct: 629 HVMELEDAKAKGAMALFGEKYDDRVRVLS 657
>gi|29654361|ref|NP_820053.1| alanyl-tRNA synthetase [Coxiella burnetii RSA 493]
gi|154706669|ref|YP_001424370.1| alanyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111]
gi|41018200|sp|Q83CQ6.1|SYA_COXBU RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|205830040|sp|A9KG28.1|SYA_COXBN RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|29541628|gb|AAO90567.1| alanyl-tRNA synthetase [Coxiella burnetii RSA 493]
gi|154355955|gb|ABS77417.1| alanyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111]
Length = 865
Score = 546 bits (1407), Expect = e-152, Method: Compositional matrix adjust.
Identities = 298/679 (43%), Positives = 430/679 (63%), Gaps = 48/679 (7%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
+ + +R+ FL+++ H+V+P +SL+PE DPT+L T AGM+QFK +FLG R RA
Sbjct: 2 NSNQLRETFLNYFKQLDHEVVPGSSLIPENDPTLLFTNAGMVQFKDVFLGVETRPYQRAV 61
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
+ Q C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI++AW+F T LP
Sbjct: 62 SIQPCMRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAIKFAWDFLTNVLKLPP 121
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHP- 222
RLW++V++DD E+ IW KE+ + E R G DNFW TGPCGPC+EI+YD P
Sbjct: 122 QRLWVTVFQDDFESESIWLKEMKINPERFSRCGEKDNFWQMRDTGPCGPCTEIFYDHGPT 181
Query: 223 -DRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVP 281
G D R++E +NLVFMQYN+ G+L PL + ++DTG+GLER+A ++Q V
Sbjct: 182 ISGGPPGSAEADGDRYVEIWNLVFMQYNRDAKGNLLPLAKPSVDTGMGLERLAAVMQGVH 241
Query: 282 NNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRG 341
+NY+ DL ++K L ++ D N ++++I DH+R++ +L++DGV PSN GRG
Sbjct: 242 DNYDIDLFQYLLKALRTL-----LKTEDLHNTSMRVIVDHIRSVAFLIADGVIPSNEGRG 296
Query: 342 YVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEE 401
YV+RR+IRRAVR G LG E F + + +E ++ + I +
Sbjct: 297 YVLRRIIRRAVRHGYKLG--------QEEPFFYQLTKPLVEEMGGAYPLLRKSQALIEQT 348
Query: 402 LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKE 461
+K+EE++F TL +G K+LD +A SR ++ G F LYDT+GFP ++T +
Sbjct: 349 IKQEEIQFSNTLTKGLKILDHEMAGLPSR--------QIPGNLIFQLYDTYGFPPDLTAD 400
Query: 462 VAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIP---DTEFLGYDTL 518
+A E +D GFD ME QR QSQ AH V A+ A+K +T+F+GY+TL
Sbjct: 401 IARERDFVMDYAGFDKAMERQREQSQQAHQFV-------ANYAQKASIGGETQFVGYETL 453
Query: 519 SAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAV 578
+++A V SLL N +P+ ++++ V+L+RTPFYAESGGQ+GD GFLY +G+
Sbjct: 454 NSQANVISLLQNDQPINRLNESEKGVVVLDRTPFYAESGGQVGDQGFLYFEKGS------ 507
Query: 579 VEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKV 638
VKD KK G +++H G + +G L V +V A VD R +H+ATHLL AL++V
Sbjct: 508 FRVKDTKKQ-GDIYLHIGEMLQGHLNVKDKVRAEVDVS-RFDIMRNHSATHLLHEALRRV 565
Query: 639 IGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT-KVMALDDA 697
+G+ Q GSLV RLRFDF+ +PL EL+ +ERL+N I ANLL T +VM ++A
Sbjct: 566 LGERVMQKGSLVEAKRLRFDFSHAKPLTPEELQAVERLVNQQI-QANLLSTIEVMTPEEA 624
Query: 698 KRAGAIAMFGEKYGEQVKI 716
K+ GA+A+FGE+YG++V++
Sbjct: 625 KKKGALALFGERYGKEVRV 643
>gi|393778053|ref|ZP_10366336.1| alanyl-tRNA synthetase [Ralstonia sp. PBA]
gi|392714939|gb|EIZ02530.1| alanyl-tRNA synthetase [Ralstonia sp. PBA]
Length = 895
Score = 546 bits (1407), Expect = e-152, Method: Compositional matrix adjust.
Identities = 305/679 (44%), Positives = 415/679 (61%), Gaps = 44/679 (6%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR +FL F+ S+GH ++ S+SLVP DPT+L T +GM+QFK +FLG R RA ++QR
Sbjct: 26 IRSKFLSFFESKGHTIVRSSSLVPGNDPTLLFTNSGMVQFKDVFLGTEQRPYTRATSAQR 85
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI++AWE T + LP +LW
Sbjct: 86 SVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAIKFAWELLTTVYQLPPEKLW 145
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYYDF 220
++VY +DDEA +IW KEVGVPVE I R+G A DNFW TGPCGPCSEI+YD
Sbjct: 146 VTVYAEDDEAHDIWAKEVGVPVERIIRIGDNKGARYASDNFWQMADTGPCGPCSEIFYDH 205
Query: 221 HPD--RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQ 278
PD G D R+IE +NLVFMQ+N+ + G+L PL + +DTG+GLERIA +LQ
Sbjct: 206 GPDVWGGPPGSPEEDGDRYIEIWNLVFMQFNRDEQGTLTPLPKPCVDTGMGLERIAAVLQ 265
Query: 279 KVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNI 338
V +NYE DL +I A + D N +LK+I DH+RA +L+ DGV P N
Sbjct: 266 HVHSNYEIDLFQALIHAAGR-----ETATADLANNSLKVIADHIRACSFLVVDGVIPGNE 320
Query: 339 GRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRI 398
GRGYV+RR++RRA+R G LG++ L + + + EL + +QR+
Sbjct: 321 GRGYVLRRIVRRAIRHGYKLGVRKPFFHKLVAELVAQMGDAYPEL--------REAQQRV 372
Query: 399 LEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEI 458
+ L+ EE RF +T+E G +LD +AD ++ G V L G+ AF L+DT+GFP+++
Sbjct: 373 TDVLRAEEERFFETIEHGMSILDAAVADL---KQKGGKV--LDGELAFKLHDTYGFPLDL 427
Query: 459 TKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTL 518
T++VA E+ +SVD FD M QR Q++AA K+ +A L T F GYDTL
Sbjct: 428 TQDVARENELSVDDAAFDTAMNRQREQARAA-GKFKM----AAGLEYAGAKTTFHGYDTL 482
Query: 519 SAK-AIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTA 577
+ A V L V+G V + G V+L+ TPFYAESGGQ GD G L T GT T
Sbjct: 483 DLEVAKVTGLYVDGLAVDTMQPGQQGVVVLDHTPFYAESGGQAGDRGVL--TAGTTAFT- 539
Query: 578 VVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKK 637
V D K VF H G + G L+VG V A VD R R +H+ATHL+ AL++
Sbjct: 540 ---VSDTTKIQPDVFGHHGALAGGTLKVGDSVLARVDALNRARTVRNHSATHLMHKALRE 596
Query: 638 VIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDA 697
V+G Q GSLV D+ RFDF+ + P+ + E+ +E ++N I ++M DDA
Sbjct: 597 VLGGHVQQKGSLVDADKTRFDFSHNAPMTEDEIRRVEAIVNAEILRNEATSAEIMPFDDA 656
Query: 698 KRAGAIAMFGEKYGEQVKI 716
++GA+A+FGEKY + V++
Sbjct: 657 VKSGAMALFGEKYADTVRV 675
>gi|153206762|ref|ZP_01945603.1| alanyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177']
gi|165918516|ref|ZP_02218602.1| alanyl-tRNA synthetase [Coxiella burnetii Q321]
gi|212218396|ref|YP_002305183.1| alanyl-tRNA synthetase [Coxiella burnetii CbuK_Q154]
gi|120577125|gb|EAX33749.1| alanyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177']
gi|165917762|gb|EDR36366.1| alanyl-tRNA synthetase [Coxiella burnetii Q321]
gi|212012658|gb|ACJ20038.1| alanyl-tRNA synthetase [Coxiella burnetii CbuK_Q154]
Length = 865
Score = 546 bits (1407), Expect = e-152, Method: Compositional matrix adjust.
Identities = 298/679 (43%), Positives = 430/679 (63%), Gaps = 48/679 (7%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
+ + +R+ FL+++ H+V+P +SL+PE DPT+L T AGM+QFK +FLG R RA
Sbjct: 2 NSNQLRETFLNYFKQLDHEVVPGSSLIPENDPTLLFTNAGMVQFKDVFLGVETRPYQRAV 61
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
+ Q C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI++AW+F T LP
Sbjct: 62 SIQPCMRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAIKFAWDFLTNVLKLPP 121
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHP- 222
RLW++V++DD E+ IW KE+ + E R G DNFW TGPCGPC+EI+YD P
Sbjct: 122 QRLWVTVFQDDFESESIWLKEMKINPERFSRCGEKDNFWQMRDTGPCGPCTEIFYDHGPT 181
Query: 223 -DRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVP 281
G D R++E +NLVFMQYN+ G+L PL + ++DTG+GLER+A ++Q V
Sbjct: 182 ISGGPPGSAEADGDRYVEIWNLVFMQYNRDAKGNLLPLAKPSVDTGMGLERLAAVMQGVH 241
Query: 282 NNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRG 341
+NY+ DL ++K L ++ D N ++++I DH+R++ +L++DGV PSN GRG
Sbjct: 242 DNYDIDLFQYLLKALRTL-----LKTEDLHNTSMRVIVDHIRSVAFLIADGVIPSNEGRG 296
Query: 342 YVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEE 401
YV+RR+IRRAVR G LG E F + + +E ++ + I +
Sbjct: 297 YVLRRIIRRAVRHGYKLG--------QEEPFFYQLTKPLVEEMGGAYPLLRKSQALIEQT 348
Query: 402 LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKE 461
+K+EE++F TL +G K+LD +A SR ++ G F LYDT+GFP ++T +
Sbjct: 349 IKQEEIQFSNTLTKGLKILDHEMAGLPSR--------QIPGNLIFQLYDTYGFPPDLTAD 400
Query: 462 VAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIP---DTEFLGYDTL 518
+A E +D GFD ME QR QSQ AH V A+ A+K +T+F+GY+TL
Sbjct: 401 IARERDFVMDYAGFDKAMERQREQSQQAHQFV-------ANYAQKASIGGETQFVGYETL 453
Query: 519 SAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAV 578
+++A V SLL N +P+ ++++ V+L+RTPFYAESGGQ+GD GFLY +G+
Sbjct: 454 NSQANVISLLQNDQPINRLNESEKGVVVLDRTPFYAESGGQVGDQGFLYFEKGS------ 507
Query: 579 VEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKV 638
VKD KK G +++H G + +G L V +V A VD R +H+ATHLL AL++V
Sbjct: 508 FRVKDTKKQ-GDIYLHIGEMLQGHLNVKDKVRAEVDVS-RFDIMRNHSATHLLHEALRRV 565
Query: 639 IGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT-KVMALDDA 697
+G+ Q GSLV RLRFDF+ +PL EL+ +ERL+N I ANLL T +VM ++A
Sbjct: 566 LGERVMQKGSLVEAKRLRFDFSHAKPLTPEELQAVERLVNQQI-QANLLSTIEVMTPEEA 624
Query: 698 KRAGAIAMFGEKYGEQVKI 716
K+ GA+A+FGE+YG++V++
Sbjct: 625 KKKGALALFGERYGKEVRV 643
>gi|294141935|ref|YP_003557913.1| alanyl-tRNA synthetase [Shewanella violacea DSS12]
gi|293328404|dbj|BAJ03135.1| alanyl-tRNA synthetase [Shewanella violacea DSS12]
Length = 874
Score = 546 bits (1407), Expect = e-152, Method: Compositional matrix adjust.
Identities = 300/679 (44%), Positives = 428/679 (63%), Gaps = 46/679 (6%)
Query: 52 SIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQ 110
++R FL+++ GH+V+ S+SLVP DPT+L T AGM QFK +FLG+ R RA +SQ
Sbjct: 7 ALRTAFLEYFHKNGHQVVDSSSLVPVNDPTLLFTNAGMNQFKDVFLGEDKRNYTRATSSQ 66
Query: 111 RCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRL 166
RC+R ND++NVG T+RHHTFFEMLGNFSFGDYFK+EAI +AW F T E +P RL
Sbjct: 67 RCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKREAITYAWNFLTQELKIPKERL 126
Query: 167 WISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYYD 219
+++YE D+EA++IW KE+GV +++ R+G A DNFW G TGPCGPCSEI+YD
Sbjct: 127 CVTIYETDNEAYDIWTKEIGVSEDNLIRIGDNKGAPYASDNFWQMGDTGPCGPCSEIFYD 186
Query: 220 F--HPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARIL 277
H G D RFIE +N+VFMQYN++ +G + L + ++DTG+G+ERIA I+
Sbjct: 187 HGEHIWGGRPGTPEEDGDRFIEIWNIVFMQYNRQSNGDMLALPKPSVDTGMGIERIAAIM 246
Query: 278 QKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSN 337
Q V +NYE D+ +IKK +E+ V+ D N +L++I DH+R+ +L++DGV PSN
Sbjct: 247 QGVHSNYEIDIFQALIKKTAEILAVT-----DLENKSLRVISDHIRSCAFLIADGVMPSN 301
Query: 338 IGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQR 397
GRGYV+RR+IRRAVR G LG +F + I + + +
Sbjct: 302 EGRGYVLRRIIRRAVRHGNKLGAT--------DSFFYKLVPTLILVMGDAAKGLVETQDI 353
Query: 398 ILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVE 457
+++ LK EE +F +TLERG +LD L +AL +G V L G+ AF LYDT+GFPV+
Sbjct: 354 VVKSLKAEEEQFARTLERGLGILDGAL-NAL-----TGKV--LDGETAFKLYDTYGFPVD 405
Query: 458 ITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDT 517
+T +V E ++VD GF++ M QR+++QAA +DS + E +TEF GY
Sbjct: 406 LTADVCREREITVDEAGFELAMSEQRKRAQAA-GQFATDYNDSLKIDE---ETEFSGYLD 461
Query: 518 LSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTA 577
L + A + ++ G+ V +++ G + V+L+ TPFY ESGGQ GD G L G +
Sbjct: 462 LVSNAKITAIYKEGESVTEINAGEEAVVVLDTTPFYGESGGQSGDSGTLSAA-GFD---- 516
Query: 578 VVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKK 637
VKD +K G H GT++ G L +G+ +EA VD LRQR +++H+ THLL AAL++
Sbjct: 517 -FIVKDTQK-YGQAIGHIGTLKTGSLSLGQSLEASVDKALRQRTELNHSVTHLLHAALRQ 574
Query: 638 VIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDA 697
++G SQ GSLV +RLRFDF+ + EL+ +E L+N I + L +VM +D A
Sbjct: 575 LLGTHVSQKGSLVDPERLRFDFSHFEGVKPEELQAVEDLVNTQIRCNHELTAQVMTIDAA 634
Query: 698 KRAGAIAMFGEKYGEQVKI 716
K GA+A+FGEKY ++V++
Sbjct: 635 KDKGAMALFGEKYADEVRV 653
>gi|293608692|ref|ZP_06690995.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292829265|gb|EFF87627.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 878
Score = 546 bits (1407), Expect = e-152, Method: Compositional matrix adjust.
Identities = 299/683 (43%), Positives = 429/683 (62%), Gaps = 50/683 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FL ++ ++GH + S+SLVP DPT+L T AGM QFK FLG R RA TSQ+
Sbjct: 6 IREAFLRYFETQGHTRVASSSLVPANDPTLLFTNAGMNQFKDCFLGLEKRDYVRATTSQK 65
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND++NVG T+RHHTFFEMLGNFSFGDYFK++A+++AWEF T E LP ++
Sbjct: 66 CVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKRDALKFAWEFLTSEQWLALPKDK 125
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
L+ +VY DDEA++IWNKE+G+ E I R+G A DNFW G TGPCGPCSEI++
Sbjct: 126 LYATVYHTDDEAYDIWNKEIGLAPERIIRIGDNKGEKYASDNFWAMGDTGPCGPCSEIFF 185
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D RFIE +N VFMQ+N+ DG L PL ++DTG+GLERI+
Sbjct: 186 D-HGDHIWGGLPGTPEEDGDRFIEIWNNVFMQFNRTADGVLHPLPAPSVDTGMGLERISA 244
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL ++K A+ + + D+ +L+++ DH R+ +L++DGV P
Sbjct: 245 VLQHVNSNYDIDLFQHLLKAAANIIGIE-----DQGQPSLRVVADHARSCCFLIADGVNP 299
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN GRGYV+RR+IRRAVR G LG G F + + IE+ ++ AR+
Sbjct: 300 SNEGRGYVLRRIIRRAVRHGNKLGATG--------TFFYKMLQPLIEVMGDAYPELAARK 351
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
I L REE +F +TLE+G KLL+ LA +T + G F LYDT+GFP
Sbjct: 352 DVIEATLIREEEQFAKTLEQGLKLLEGELAQLKDKT--------IPGATVFKLYDTYGFP 403
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGY 515
++T ++A E +D GF++EM QR Q A +A K +VD + ++ + +T+F GY
Sbjct: 404 TDLTADIARERDFIIDEAGFEVEMAAQR---QRARDAGKFAVDYN-NIVKVEGETQFDGY 459
Query: 516 DTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
+ + + ++ +G V +VS+G + ++LN+TPFYAESGGQIGD G +
Sbjct: 460 INTTGQGQIVAIYKDGVQVDEVSEGDEALIVLNQTPFYAESGGQIGDTGIF------KNE 513
Query: 576 TAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAAL 635
T + EV+D KKS G FVH+G + G L+ + VEAIV +R+ +H+ATHLL AAL
Sbjct: 514 TGIFEVQDTKKS-GGAFVHQGIVTVGSLKADQNVEAIVKADIREATARNHSATHLLHAAL 572
Query: 636 KKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALD 695
++++G Q GSLVA D LRFDF +P+ +L+++ERL+N I + + T+++ ++
Sbjct: 573 RQILGSHVQQKGSLVASDILRFDFANDQPVTFEQLQQVERLVNAEIIANSAVTTELLDIE 632
Query: 696 DAKRAGAIAMFGEKYGEQVKISS 718
AK GA+ +FGEKYG++V++ S
Sbjct: 633 AAKAKGAMMLFGEKYGDEVRVLS 655
>gi|344206948|ref|YP_004792089.1| alanyl-tRNA synthetase [Stenotrophomonas maltophilia JV3]
gi|343778310|gb|AEM50863.1| alanyl-tRNA synthetase [Stenotrophomonas maltophilia JV3]
Length = 882
Score = 546 bits (1407), Expect = e-152, Method: Compositional matrix adjust.
Identities = 320/695 (46%), Positives = 429/695 (61%), Gaps = 53/695 (7%)
Query: 41 DKSQDFPSSGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKV 99
+ S F +S IR FL+F+ +GH ++PSA LVP DPT+L T +GM+QFK +FLG
Sbjct: 2 NASAKFTTS--QIRSDFLEFFKGKGHTIVPSAPLVPGNDPTLLFTNSGMVQFKDVFLGAE 59
Query: 100 PRQVPRAATSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFS 155
R RAA QRC+R ND++ VG T+RHHTFFEMLGN+SFGDYFKK+AI WAWE
Sbjct: 60 KRSYVRAADVQRCLRAGGKHNDLDQVGYTARHHTFFEMLGNWSFGDYFKKDAIAWAWELL 119
Query: 156 TVEFGLPANRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATG 208
T + LPA RL ++VY+ DDEA+ +W VGVP E I R+G A DNFW TG
Sbjct: 120 TQVWKLPAERLLVTVYQTDDEAYALWRDMVGVPEERIVRIGDNKGAPFASDNFWQMADTG 179
Query: 209 PCGPCSEIYYDFHPDR------GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQK 262
PCGPC+EI+YD H D G D D GD RFIE +NLVFMQ++++ DG+L PL
Sbjct: 180 PCGPCTEIFYD-HGDHIAGGPPGSPDED-GD--RFIEIWNLVFMQFDRQPDGTLVPLPAP 235
Query: 263 NIDTGLGLERIARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHL 322
+DTG+GLER+A ILQ V NYE DL +I+KASEL + D N +L++I DH+
Sbjct: 236 CVDTGMGLERLAAILQHVHTNYEIDLFQALIRKASELTGTA-----DLENKSLRVIADHI 290
Query: 323 RAIVYLLSDGVFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIE 382
RA +L+ DGV PSN GRGYV+RR+IRRA+R G +LG++ L + + E E
Sbjct: 291 RACSFLIVDGVLPSNEGRGYVLRRIIRRALRHGWMLGVRQPFFSKLVPTLVEQMGEAYPE 350
Query: 383 LSTHIDSDVKAREQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSG 442
L +D+ +A L+ EE RF +TL+ G K+ + + A +G +P G
Sbjct: 351 LPAAVDTVTRA--------LQAEEERFAETLDAGMKIFEDVAGKA-----SNGVIP---G 394
Query: 443 QDAFLLYDTFGFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD 502
DAF LYDT+GFP+++T+++A E ++VD+ GFD ME QR ++AA V A+
Sbjct: 395 VDAFRLYDTYGFPLDLTQDIARERDLTVDIAGFDAAMEQQRETARAA-GKFGGGVTLPAE 453
Query: 503 LAEKIPDTEFLGYDTLSAKAI-VESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIG 561
L + T FLGYD L A + V +LL +G+PV G V V+ N+TPFYAESGGQ+G
Sbjct: 454 LVATLSPTVFLGYDRLQADGLSVLALLKDGRPVQSADAGDAVIVITNQTPFYAESGGQVG 513
Query: 562 DYGFLYVTQGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRA 621
D G L T +V V+D +K G H GT+ EG L+VG + VD + R
Sbjct: 514 DTGVL-----TGNGVRLV-VEDTQKFAGQFHGHVGTLSEGGLKVGDVLSGQVDGERRGAT 567
Query: 622 KVHHTATHLLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWI 681
++H+ATHLL AAL++V+G Q GSLVA DRLRFDF+ +P+ EL IER +N +
Sbjct: 568 ILNHSATHLLHAALREVLGTHVQQKGSLVAPDRLRFDFSHFQPISAEELAVIERKVNQQV 627
Query: 682 GDANLLQTKVMALDDAKRAGAIAMFGEKYGEQVKI 716
N + MA+ +A GA+A+FGEKYGE V++
Sbjct: 628 RANNAAEVHTMAMQEALDFGAMALFGEKYGEHVRV 662
>gi|421724108|ref|ZP_16163347.1| alanyl-tRNA ligase [Klebsiella oxytoca M5al]
gi|410375088|gb|EKP29730.1| alanyl-tRNA ligase [Klebsiella oxytoca M5al]
Length = 875
Score = 546 bits (1407), Expect = e-152, Method: Compositional matrix adjust.
Identities = 309/689 (44%), Positives = 434/689 (62%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTAQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI++AWE T E F LP +
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAIKYAWELLTGESWFALPKEK 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEAF+IW EVGVP E I R+G A DNFW G TGPCGPC+EI++
Sbjct: 128 LWVTVYETDDEAFDIWANEVGVPRERIIRIGDNKGAPFASDNFWQMGDTGPCGPCTEIFF 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGTPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +IK +++ + D +N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRDLIKSVAKVTGAT-----DLSNKSLRVIADHIRSCAFLIADGVIP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRA+R G +LG K F + I++ ++K ++
Sbjct: 302 SNENRGYVLRRIIRRAIRHGNMLGAKE--------TFFWKLVAPLIDVMGSAGEELKQQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLQGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQ------AAHNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD
Sbjct: 406 VDLTADVCRERNIKVDEPGFEAAMEEQRRRARESSGFGADYNAM-IRVDGV--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD+L V +L ++GK V V+ G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDSLELNGKVTALFIDGKAVDAVNAGQEAVVILDQTPFYAESGGQVGDKGELKGA 515
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+ Q V D +K G H G + G L+VG V+A VD RQR +++H+ATH
Sbjct: 516 GFSFQ------VNDAQK-YGQAIGHIGKVTGGSLKVGDAVQADVDEARRQRIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G +Q GSLV LRFDF+ + E+ +E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVAQKGSLVNDKALRFDFSHFEAMKPEEIRAVEDLVNAQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M +D A+ +GA+A+FGEKY ++V++ S
Sbjct: 629 NIMDIDAARESGAMALFGEKYDDRVRVLS 657
>gi|423125360|ref|ZP_17113039.1| alanyl-tRNA synthetase [Klebsiella oxytoca 10-5250]
gi|376398966|gb|EHT11587.1| alanyl-tRNA synthetase [Klebsiella oxytoca 10-5250]
Length = 875
Score = 546 bits (1407), Expect = e-152, Method: Compositional matrix adjust.
Identities = 306/689 (44%), Positives = 437/689 (63%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTAQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI++AWE T E F LP +
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAIKYAWELLTGESWFALPKEK 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEAF+IW +VGVP E I R+G A DNFW G TGPCGPC+EI++
Sbjct: 128 LWVTVYETDDEAFDIWANDVGVPRERIIRIGDNKGAPFASDNFWQMGDTGPCGPCTEIFF 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGTPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +IK +++ + D +N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRDLIKNVAKVTGAT-----DLSNKSLRVIADHIRSCAFLIADGVIP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRA+R G +LG K F + I++ ++K ++
Sbjct: 302 SNENRGYVLRRIIRRAIRHGNMLGAKE--------TFFWKLVAPLIDVMGSAGDELKQQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLQGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQ------AAHNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRARESSGFGADYNAM-IRVDGA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD+L V +L ++GK V V+ G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDSLELNGKVTALFIDGKAVDAVNAGQEAVVILDQTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G V + + +++G H G + G L+VG V+A VD RQR +++H+ATH
Sbjct: 513 KGAGFSFHVNDAQKYGQAIG----HIGKVTSGSLKVGDAVQADVDEARRQRIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G +Q GSLV LRFDF+ + E+ +E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVAQKGSLVNDKALRFDFSHFEAMKPEEIRAVEDLVNAQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+M +D A+ +GA+A+FGEKY ++V++ S
Sbjct: 629 NIMDIDAARESGAMALFGEKYDDRVRVLS 657
>gi|399050734|ref|ZP_10740778.1| alanine--tRNA ligase [Brevibacillus sp. CF112]
gi|433545189|ref|ZP_20501549.1| alanyl-tRNA synthetase [Brevibacillus agri BAB-2500]
gi|398051450|gb|EJL43772.1| alanine--tRNA ligase [Brevibacillus sp. CF112]
gi|432183578|gb|ELK41119.1| alanyl-tRNA synthetase [Brevibacillus agri BAB-2500]
Length = 882
Score = 546 bits (1406), Expect = e-152, Method: Compositional matrix adjust.
Identities = 298/676 (44%), Positives = 426/676 (63%), Gaps = 31/676 (4%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
+G+ IR+ FLDF+ +GH++ PSA LVP +DP++L +G+ K F G++ PR
Sbjct: 5 TGNQIRQMFLDFFVEKGHRIEPSAPLVPIDDPSLLWINSGVATLKKYFDGRIIPDNPRIT 64
Query: 108 TSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
SQ+ IRTND+ENVGRT+RHHTFFEMLGNFS GDYFK EAI+WAWEF T G R
Sbjct: 65 NSQKSIRTNDIENVGRTARHHTFFEMLGNFSIGDYFKAEAIEWAWEFLTSPKWIGFDPER 124
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRG 225
L ++++ +D+EAFE+WNK++G+P E I R+ + NFW+ G GP GP +EI+YD + G
Sbjct: 125 LSVTIHPEDEEAFELWNKKIGIPEERIIRL--EGNFWDIG-EGPSGPNTEIFYDRGEEFG 181
Query: 226 C--SDVDL---GDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKV 280
+D +L G++ R++E +NLVF Q+N DG+ PL +KNIDTG+GLER+A ILQ V
Sbjct: 182 NDPNDPELYPGGENERYLEVWNLVFSQFNHNPDGTYTPLPKKNIDTGMGLERMASILQGV 241
Query: 281 PNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGR 340
NN+ETDL+FP+I++ S ++ V Y S + ++ LK+I DH R +V+ + DG PSN GR
Sbjct: 242 DNNFETDLLFPLIEQTSAISGVKYKTSPE-LDVALKVIADHARTVVFAIGDGALPSNEGR 300
Query: 341 GYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILE 400
GYV+RRL+RRAVR G+ LG+ E FL S+ E ++ +V + + I +
Sbjct: 301 GYVIRRLLRRAVRMGKKLGV--------EKPFLYSLTETVGKMMGEFYPEVVQKREFIEK 352
Query: 401 ELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITK 460
++ EE RF +TL G +L +M+ A +ESG +LSGQD F +YDT+GFPV++T+
Sbjct: 353 VIRAEEERFHETLNDGLAILSEMVKAA----KESGQ-SQLSGQDVFKMYDTYGFPVDLTE 407
Query: 461 EVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTLSA 520
+ A E G++VD GF+ ME QR +++AA V L+E +EF+GY L A
Sbjct: 408 DFANEQGLTVDRDGFEQAMEEQRERARAARQDVDSMQIQGGPLSELTVTSEFVGYTELVA 467
Query: 521 KAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVE 580
VE+++++ + + +G V+V+L++TPFYAESGGQI D G+L +
Sbjct: 468 TGKVEAIILDNQLADEAEEGQTVQVILDQTPFYAESGGQINDEGYLL------SDSVKAR 521
Query: 581 VKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIG 640
V DV+K VH I G L G V A V+ + R +HTATHLL ALK V+G
Sbjct: 522 VTDVQKGPKGQNVHSVIIEAGTLRKGDTVRAEVNREARLAITKNHTATHLLHQALKDVLG 581
Query: 641 QETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRA 700
+QAGSLVA +RLRFDF + ELE IE ++N + + ++ L +AK
Sbjct: 582 THVNQAGSLVAPERLRFDFTHISAITPEELERIEAIVNEKVWENLAVEISNKPLAEAKAM 641
Query: 701 GAIAMFGEKYGEQVKI 716
GA+A+FGEKYG+ V++
Sbjct: 642 GAMALFGEKYGDIVRV 657
>gi|187924800|ref|YP_001896442.1| alanyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
gi|205830007|sp|B2SZN0.1|SYA_BURPP RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|187715994|gb|ACD17218.1| alanyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
Length = 874
Score = 546 bits (1406), Expect = e-152, Method: Compositional matrix adjust.
Identities = 299/681 (43%), Positives = 416/681 (61%), Gaps = 48/681 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR++FL F+ S+GH ++ S+SLVP DPT+L T +GM+QFK +FLG R RA T+QR
Sbjct: 6 IREKFLKFFESKGHTIVRSSSLVPGNDPTLLFTNSGMVQFKDVFLGAESRPYSRATTAQR 65
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI +AWE T + LP ++LW
Sbjct: 66 SVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAIHYAWELLTGVYQLPKDKLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYYDF 220
++VY +DDEA +IW KEVGVPVE I R+G A DNFW GPCGPCSEI+YD
Sbjct: 126 VTVYHEDDEAHDIWAKEVGVPVERIIRIGDNKGARYASDNFWQMADVGPCGPCSEIFYDH 185
Query: 221 HPD--RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQ 278
PD G D R+IE +NLVFMQ+++ G++ PL ++ +DTG+GLERIA +LQ
Sbjct: 186 GPDVWGGPPGSPEEDGDRYIEIWNLVFMQFSRDAQGNMTPLPKQCVDTGMGLERIAAVLQ 245
Query: 279 KVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNI 338
V +NYE DL +IK A VS D TN +LK+I DH+RA +L+ DGV P N
Sbjct: 246 HVHSNYEIDLFQALIKAAGRETGVS-----DLTNNSLKVIADHIRACSFLIVDGVIPGNE 300
Query: 339 GRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRI 398
GRGYV+RR++RRA+R G LG K G+F + + ++K EQR+
Sbjct: 301 GRGYVLRRIVRRAIRHGYKLGKK--------GSFFHRMVADLVAQMGDAYPELKEAEQRV 352
Query: 399 LEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEI 458
+ L++EE RF +T+E G +L+ LAD ++ ++ L G+ AF L+DT+GFP+++
Sbjct: 353 TDVLRQEEERFFETIEHGMSILESALADLEAKGGKT-----LDGELAFKLHDTYGFPLDL 407
Query: 459 TKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTL 518
T +V E V+VD FD M QR Q++AA K+ + L T F GY+ +
Sbjct: 408 TADVCREREVTVDEAAFDEAMARQREQARAA-GKFKM----AQGLEYSGAKTTFHGYEEI 462
Query: 519 ---SAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
AK I +L V+G V +V G V+L+ TPFYAESGGQ+GD G L
Sbjct: 463 VFDDAKVI--ALYVDGASVKEVRDGRQAVVVLDHTPFYAESGGQVGDQGVL------ANA 514
Query: 576 TAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAAL 635
+ V D K V H GT+ +G L+VG V+A +D R R +H+ATHL+ AL
Sbjct: 515 SVRFAVSDTLKVQADVVGHHGTLEQGTLKVGDVVKAEIDAVRRARTARNHSATHLMHKAL 574
Query: 636 KKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALD 695
++V+G Q GSLV D+ RFDF + P+ D ++ +E ++N + +VM D
Sbjct: 575 REVLGSHVQQKGSLVDADKTRFDFAHNAPMTDEQIRRVEEIVNAEVLANAPGIVRVMPFD 634
Query: 696 DAKRAGAIAMFGEKYGEQVKI 716
+A + GA+A+FGEKYG++V++
Sbjct: 635 EAVKGGAMALFGEKYGDEVRV 655
>gi|84517390|ref|ZP_01004743.1| alanyl-tRNA synthetase [Loktanella vestfoldensis SKA53]
gi|84508754|gb|EAQ05218.1| alanyl-tRNA synthetase [Loktanella vestfoldensis SKA53]
Length = 884
Score = 546 bits (1406), Expect = e-152, Method: Compositional matrix adjust.
Identities = 301/677 (44%), Positives = 431/677 (63%), Gaps = 41/677 (6%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR FL+++ +GH+V+PS+ LVP DPT++ T +GM+QFK +F G R RA TSQ+
Sbjct: 7 IRSTFLNYFEKQGHRVVPSSPLVPRNDPTLMFTNSGMVQFKNLFTGVETRDYSRATTSQK 66
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
C+R ND++NVG T+RHHTFFEMLGNFSFGDYFK +AI +AWE T +FG+ +RL
Sbjct: 67 CVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKSDAIPFAWELLTRDFGIDKSRLL 126
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDR--- 224
+VY DDEAF++W K++GVP + I R+ DDNFW G TGPCGPC+EI+YD H D
Sbjct: 127 TTVYHTDDEAFDLW-KKIGVPEDRIIRIPTDDNFWRMGPTGPCGPCTEIFYD-HGDHIWG 184
Query: 225 GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNY 284
G D RFIE +N+VFMQ + +DGS+ PL ++IDTG+GLERI +LQ +NY
Sbjct: 185 GPPGSPEEDGDRFIEIWNVVFMQNEQFEDGSMRPLDMQSIDTGMGLERIGALLQGKHDNY 244
Query: 285 ETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVV 344
+TD++ +I+ + AN + + + N + ++I DHLR+ +L+++GV PSN GRGYV+
Sbjct: 245 DTDVMRALIEAS---ANATSSDPDGPGNTHHRVIADHLRSTSFLIAEGVLPSNEGRGYVL 301
Query: 345 RRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEE-LK 403
RR++RRA+R LLG K L A + + EL + QR++EE L
Sbjct: 302 RRIMRRAMRHAHLLGAKDPVMHRLVSALVQQMGAAYPEL---------GQGQRLIEETLM 352
Query: 404 REELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVA 463
EE+RF QTL+RG KLLD D L+ E ++P G+ AF LYDT+GFP+++T++
Sbjct: 353 NEEIRFKQTLDRGLKLLD----DELAGLPEDAALP---GEAAFKLYDTYGFPLDLTQDAL 405
Query: 464 EEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSA--DLAEKIPDTEFLGYDTLSAK 521
E G +VD GFD M Q+ +++AA + + D + D+A+ T+FLGYD+L +
Sbjct: 406 REKGRAVDTDGFDAAMAAQKAKARAAWSGTGEAADSAIWFDVADLAGPTDFLGYDSLDVE 465
Query: 522 AIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEV 581
+++L+ +G V + G V+++LN+T FYAESGGQ+GD G L GT Q +
Sbjct: 466 GQIKALVADGAMVQQA--GGAVQIVLNQTSFYAESGGQVGDAGILQTDTGTAQ------I 517
Query: 582 KDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQ 641
D KK G VF+H T+ G + VG+ VD R + +H+ATHLL AL++ +G
Sbjct: 518 TDTKKVAG-VFIHFATVTNGTIAVGQGAALRVDAGRRAAVQANHSATHLLNEALRETLGD 576
Query: 642 ETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAG 701
+Q GSL A DRLRFDF+ +P+ EL +IER +N I ++T++MA DDA+ G
Sbjct: 577 HIAQRGSLNAPDRLRFDFSHTKPVSADELAQIERDVNALIRQNTRVETRIMAPDDARALG 636
Query: 702 AIAMFGEKYGEQVKISS 718
A A+FGEKYG++V++ S
Sbjct: 637 AQALFGEKYGDEVRVVS 653
>gi|326204671|ref|ZP_08194527.1| alanyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782]
gi|325985238|gb|EGD46078.1| alanyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782]
Length = 879
Score = 546 bits (1406), Expect = e-152, Method: Compositional matrix adjust.
Identities = 286/672 (42%), Positives = 430/672 (63%), Gaps = 27/672 (4%)
Query: 51 DSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATS 109
+ +R+R+L F+ S+GH L SA LVP+ DP++LL +GM KP F G+ R T
Sbjct: 7 NELRERYLKFFESKGHLRLASAPLVPKNDPSLLLINSGMAPLKPFFTGQEEPPRKRVTTC 66
Query: 110 QRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWIS 169
Q+CIRT D+ENVG+T+RH T+FEMLGNFSFGDYFK EAI WAWEF T + +P +LW++
Sbjct: 67 QKCIRTPDIENVGKTARHGTYFEMLGNFSFGDYFKNEAIPWAWEFVTEDLKMPVEKLWVT 126
Query: 170 VYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCS-- 227
+YEDDDEAF+IW+K VG+P E I RMG DNFW G TGPCGPCSEIY+D P++GC
Sbjct: 127 IYEDDDEAFDIWHKVVGLPAERIVRMGKKDNFWEHG-TGPCGPCSEIYFDRGPEKGCGSP 185
Query: 228 DVDLGDDT-RFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYET 286
D +G + R++EF+N VF Q+N+ + G+ L NIDTG+GLER+A I Q V N +E
Sbjct: 186 DCKVGCECDRYVEFWNNVFTQFNRDEQGNYTRLTHPNIDTGMGLERLACISQDVDNLFEV 245
Query: 287 DLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRR 346
D ++ I+ + A V Y +S ++T++++++I DH+R+ ++ DGV PSN GRGYV+RR
Sbjct: 246 DTVWNILDYICKTAGVEYKKS-EKTDVSIRVITDHIRSTTMMVCDGVLPSNEGRGYVLRR 304
Query: 347 LIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREE 406
L+RRA R GRLLGI FL +A I S ++ + I + +K EE
Sbjct: 305 LLRRAARHGRLLGIN--------KPFLYDVAMVVINESKEAYPELAEKAGYIKKVIKIEE 356
Query: 407 LRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEH 466
RF T+++G +L+ + + ++ +E + G+ F L+DT+GFP+++T+E+AEE+
Sbjct: 357 ERFEATVDQGIVILNDFIDEIKAKKQEV-----IPGEMVFKLHDTYGFPLDLTREIAEEN 411
Query: 467 GVSVDMKGFDIEMENQRRQSQAAHNAVKLSV--DDSADLAEKIPDTEFLGYDTLSAKAIV 524
G+ +D GF EM+ QR++++ AHN+ S D D +K T F+GY+ + ++++
Sbjct: 412 GLGIDEDGFKKEMDAQRKKARDAHNSKDTSAWSDSVFDKLDKSQKTAFVGYENIVCESVI 471
Query: 525 ESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDV 584
++ +G+ V +G ++ V+L++TPFYAE GGQ+GD G L G V+++++
Sbjct: 472 LYIVKDGEIVDTAQEGDEITVILDKTPFYAEMGGQVGDSGALIAKNG------VIKIENC 525
Query: 585 KKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETS 644
K+ F+H G + G++E G V A +D K R +HT THLL AL+ V+G
Sbjct: 526 TKTADGKFLHTGFVETGLVETGSTVTASIDEKRRTAINRNHTVTHLLHKALRTVLGDHVH 585
Query: 645 QAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIA 704
QAGSLV ++LRFDF+ + EL+++E + N I ++ + K M +D+AK+ GA+A
Sbjct: 586 QAGSLVEPNKLRFDFSHFSAMTPEELKKVEDMTNEAILNSMEVDVKEMPIDEAKKLGAMA 645
Query: 705 MFGEKYGEQVKI 716
+FGEKYG V++
Sbjct: 646 LFGEKYGNTVRV 657
>gi|152971551|ref|YP_001336660.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae MGH
78578]
gi|205830073|sp|A6TCV9.1|SYA_KLEP7 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|150956400|gb|ABR78430.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae MGH
78578]
Length = 875
Score = 546 bits (1406), Expect = e-152, Method: Compositional matrix adjust.
Identities = 306/687 (44%), Positives = 434/687 (63%), Gaps = 62/687 (9%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTAQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI++AWE T E F LP +
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAIKYAWELLTGENWFALPKEK 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEAF+IW EVGVP E I R+G A DNFW G TGPCGPC+EI++
Sbjct: 128 LWVTVYETDDEAFDIWANEVGVPRERIIRIGDNKGAPFASDNFWQMGDTGPCGPCTEIFF 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +I +++ + D TN +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRDLIASVAKVTGAT-----DLTNKSLRVIADHIRSCAFLVADGVIP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRA+R G +LG K F + I++ ++K ++
Sbjct: 302 SNENRGYVLRRIIRRAIRHGNMLGAKD--------TFFWKLVAPLIDVMGSAGDELKQQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ L+ T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELSKLKGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQ------AAHNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD +
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRARESSGFGADYNAM-IRVDGA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD L V +L ++GK V VS G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDHLELNGKVTALFIDGKAVDSVSAGQEAVVILDQTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G AV + + +++G H G + G L+VG V+A VD R R +++H+ATH
Sbjct: 513 KGAGFSFAVSDTQKYGQAIG----HIGKVASGSLKVGDAVQADVDEARRHRIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G +Q GSLV LRFDF+ + E+ +E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVAQKGSLVNDKALRFDFSHFEAMKPEEIRAVEDLVNAQIRRNLAIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKI 716
+M +D A+ +GA+A+FGEKY ++V++
Sbjct: 629 NIMDIDAARASGAMALFGEKYDDRVRV 655
>gi|357417032|ref|YP_004930052.1| alanyl-tRNA synthetase [Pseudoxanthomonas spadix BD-a59]
gi|355334610|gb|AER56011.1| alanyl-tRNA synthetase [Pseudoxanthomonas spadix BD-a59]
Length = 883
Score = 546 bits (1406), Expect = e-152, Method: Compositional matrix adjust.
Identities = 307/686 (44%), Positives = 424/686 (61%), Gaps = 49/686 (7%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
S + +R+ FLDF+ +GH ++PSA LVP DPT+L T +GM+QFK +FLG R RAA
Sbjct: 7 SSNQVRQDFLDFFRGKGHTIVPSAPLVPGNDPTLLFTNSGMVQFKDVFLGAEKRSYVRAA 66
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
QRC+R ND++ VG T+RHHTFFEMLGN+SFGDYFKK+AI WAWE T + LPA
Sbjct: 67 DVQRCLRAGGKHNDLDQVGYTARHHTFFEMLGNWSFGDYFKKDAIAWAWELLTQVWKLPA 126
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEI 216
RL ++VY D+EA+ +W++ +G+P E I R+G A DNFW TGPCGPC+EI
Sbjct: 127 ERLLVTVYHTDEEAYALWHEMIGIPAERIVRIGDNKGAPFASDNFWQMADTGPCGPCTEI 186
Query: 217 YYDFHPD-----RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLE 271
+YD D G D D GD RFIE +NLVFMQ++++ DG+L PL +DTG+GLE
Sbjct: 187 FYDHGADIAGGPPGSPDED-GD--RFIEIWNLVFMQFDRQPDGTLVPLPAPCVDTGMGLE 243
Query: 272 RIARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSD 331
R+ +LQ V +NYE DL +IK A+ L + D N +L++I DH+RA +L+ D
Sbjct: 244 RLVAVLQHVHSNYEIDLFQTLIKDAARL-----TATTDLENKSLRVIADHIRACAFLIVD 298
Query: 332 GVFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDV 391
GV PSN GRGYV+RR+IRRA+R G +LG++ F + L ++
Sbjct: 299 GVLPSNEGRGYVLRRIIRRALRHGWMLGVR--------QPFFFQLVPTLSALMGDAYPEL 350
Query: 392 KAREQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDT 451
AR+ + LK EE RF +TL+ G ++ +++ A A +T + G DAF LYDT
Sbjct: 351 PARQDLVERALKAEEERFAETLDAGMRIFEEVAARAKGKT--------IPGVDAFRLYDT 402
Query: 452 FGFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTE 511
+GFPV++T ++A E G+ VD+ GFD M QR+ ++AA A+L ++ TE
Sbjct: 403 YGFPVDLTADIARERGMEVDLAGFDEAMAQQRQTARAAGRFAS-GTGLPAELVAQLRPTE 461
Query: 512 FLGYDTLSAKAI-VESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQ 570
FLGYD L A+ + V +LL +G+PV ++ G VLL RTPFYAESGGQ+GD G L +
Sbjct: 462 FLGYDCLQAQDLPVVALLRDGRPVQRLEAGESGVVLLARTPFYAESGGQVGDTGVLEGER 521
Query: 571 GTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHL 630
G EV D K G H G + +GVL VG + A D + R ++H+ATHL
Sbjct: 522 GR------FEVSDTLKLAGQFHGHVGRVSQGVLAVGDVLSATADAQRRGATILNHSATHL 575
Query: 631 LQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTK 690
L AAL+ ++G Q GSLVA DRLRFDF+ +P+ +EL E+ER +N I + ++
Sbjct: 576 LHAALRSLLGTHVQQKGSLVAPDRLRFDFSHFQPVSASELAEVERRVNAEIRRNHAVEIH 635
Query: 691 VMALDDAKRAGAIAMFGEKYGEQVKI 716
M + +A GA+A+FGEKYGE V++
Sbjct: 636 HMGMQEALEFGAMALFGEKYGEHVRV 661
>gi|83955444|ref|ZP_00964075.1| alanyl-tRNA synthetase [Sulfitobacter sp. NAS-14.1]
gi|83840088|gb|EAP79263.1| alanyl-tRNA synthetase [Sulfitobacter sp. NAS-14.1]
Length = 886
Score = 546 bits (1406), Expect = e-152, Method: Compositional matrix adjust.
Identities = 293/678 (43%), Positives = 416/678 (61%), Gaps = 36/678 (5%)
Query: 51 DSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATS 109
+ IR FL ++ +GH + PS+ LVP DPT++ +GM+QFK +F G R RA T+
Sbjct: 5 NDIRSTFLGYFEKQGHSIQPSSPLVPRNDPTLMFANSGMVQFKNLFTGVETRDYSRATTA 64
Query: 110 QRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANR 165
Q+C+R ND++NVG T+RHHTFFEMLGNFSFGDYFK EAI ++WE T E G+ NR
Sbjct: 65 QKCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKAEAIAFSWELITKELGIDPNR 124
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDR- 224
L+++VY DDEA EIW K G+P + I R+ DDNFW G TGPCGPCSEI+YD H D
Sbjct: 125 LYVTVYHTDDEAAEIWKKVAGLPDDRIIRIATDDNFWMMGPTGPCGPCSEIFYD-HGDHI 183
Query: 225 --GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPN 282
G D RF+E +NLVFMQY + +DGS L ++IDTG+G+ER+A +LQ +
Sbjct: 184 WGGPPGSPEEDGDRFVEIWNLVFMQYEQFEDGSRTALPNQSIDTGMGIERVAALLQGTND 243
Query: 283 NYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGY 342
NY TDL+ +I+ + A+ S + + ++I DHLR+ +L++DGV PSN GRGY
Sbjct: 244 NYATDLMRNLIEAS---AHASSTDPDGPGKTHHRVIADHLRSTSFLIADGVMPSNDGRGY 300
Query: 343 VVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEEL 402
V+RR++RRA+R LLG+K L + + EL + I E L
Sbjct: 301 VLRRIMRRAMRHAHLLGLKDPLMHRLVPELVRQMGGAYPELGQ--------AQSLITETL 352
Query: 403 KREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEV 462
EE RF QTL+RG KLLD D L +P G+ AF LYDT+GFPV++T++
Sbjct: 353 LLEETRFKQTLDRGLKLLD----DELKGLPAGADLP---GEAAFKLYDTYGFPVDLTQDA 405
Query: 463 AEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSA--DLAEKIPDTEFLGYDTLSA 520
E VD++GF+ M+ Q+ +++AA + + D + D+AEK T+FLGYDT +A
Sbjct: 406 LREQDRKVDLEGFNAAMDAQKAKARAAWSGSGEAADATVWFDVAEKSGTTDFLGYDTETA 465
Query: 521 KAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVE 580
+ + +L+ +G V +V +G V++ LN+TPFYAESGGQ+GD G + G VV
Sbjct: 466 EGQIVALIQDGAQVAEVKQGDAVQIALNQTPFYAESGGQVGDTGTIKTDSG------VVT 519
Query: 581 VKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIG 640
V D +K+ G VF+H G + EG ++ + VD R + +H+ATHLL AL+K +G
Sbjct: 520 VTDTRKTAG-VFIHIGEVTEGTVKTSQAAVLDVDHARRTSIRANHSATHLLNEALRKTLG 578
Query: 641 QETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRA 700
Q GSL A DRLRFD++ + + +L +E +N +I ++T++M DDA+
Sbjct: 579 DHVMQRGSLNAADRLRFDYSHNHAMTTDQLAAVEEEVNSYIRQNTAVETRIMTPDDAREM 638
Query: 701 GAIAMFGEKYGEQVKISS 718
GA A+FGEKYG++V++ S
Sbjct: 639 GAQALFGEKYGDEVRVVS 656
>gi|88860236|ref|ZP_01134874.1| alanyl-tRNA synthetase [Pseudoalteromonas tunicata D2]
gi|88817434|gb|EAR27251.1| alanyl-tRNA synthetase [Pseudoalteromonas tunicata D2]
Length = 866
Score = 546 bits (1406), Expect = e-152, Method: Compositional matrix adjust.
Identities = 303/677 (44%), Positives = 426/677 (62%), Gaps = 48/677 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLD+++S+ H+ + S+SLVP DPT+L T AGM+QFK +FLG R RA +SQR
Sbjct: 9 IRQAFLDYFSSKQHQAIASSSLVPGNDPTLLFTNAGMVQFKDVFLGADKRPYTRATSSQR 68
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI++AWEF T LP +L
Sbjct: 69 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKEDAIKFAWEFLTTVLKLPTEKLL 128
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPD---- 223
++VY DDEAF+IW+K+VG+P + I R+ DNFW+ G TGPCGPCSEI+YD D
Sbjct: 129 VTVYHTDDEAFDIWHKQVGLPADRIIRITTTDNFWSMGDTGPCGPCSEIFYDHGDDIWGG 188
Query: 224 -RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPN 282
G ++ D GD RFIE +NLVFMQ+N+ DGS+EPL ++++DTG+GLERI+ I+Q V +
Sbjct: 189 PPGSAEED-GD--RFIEIWNLVFMQFNRHADGSMEPLPKQSVDTGMGLERISAIMQGVHS 245
Query: 283 NYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGY 342
NYE D+ +I+ A+++ N + D + +L++I DH+R+ +L++DGV PSN GRGY
Sbjct: 246 NYEIDIFQGLIRAAADVTN-----AQDLEDKSLRVIADHIRSCAFLIADGVMPSNEGRGY 300
Query: 343 VVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEEL 402
V+RR+IRRAVR G LG K + L GA + + EL +++ I+E++
Sbjct: 301 VLRRIIRRAVRHGNKLGAKDNFFHKLVGALAEQMGDAYQELY---------KQREIIEKV 351
Query: 403 KR-EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKE 461
R EE +F +TLERG +L+ L D +G V + G F LYDT+GFP ++T +
Sbjct: 352 LRIEEEQFSKTLERGLAILEDGLKDI------TGDV--IPGDVVFKLYDTYGFPADLTAD 403
Query: 462 VAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTLSAK 521
VA E +++D GF M QR+ +Q A K D + L T+F GY+
Sbjct: 404 VARERFMTIDEPGFQACMAAQRKMAQ---QAGKFGTDYNEQLKSD-KHTDFKGYEHEHFS 459
Query: 522 AIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEV 581
V L G+ V ++ G V+L+RTPFYAESGGQ GD G L + G V
Sbjct: 460 GTVIELFFEGQSVNSLADGQKGIVVLDRTPFYAESGGQAGDKGILKIAGGE------FSV 513
Query: 582 KDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQ 641
+ K LG+ F H G I +G + + V+A +D R + +HTATHLL AL++V+G+
Sbjct: 514 YNTTK-LGNAFAHTGVI-QGQIALNDRVDAQIDTTRRDNIRKNHTATHLLHEALRQVLGE 571
Query: 642 ETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAG 701
Q GSLV +RLRFDF+ + +L EIE ++N I LQT++M +DDAK G
Sbjct: 572 HVGQKGSLVESERLRFDFSHFEGVTKAQLIEIELMVNAEIRRNVDLQTELMQIDDAKAKG 631
Query: 702 AIAMFGEKYGEQVKISS 718
A+A+FGEKY ++V++ S
Sbjct: 632 AMALFGEKYDDEVRVVS 648
>gi|86138306|ref|ZP_01056880.1| alanyl-tRNA synthetase [Roseobacter sp. MED193]
gi|85824831|gb|EAQ45032.1| alanyl-tRNA synthetase [Roseobacter sp. MED193]
Length = 883
Score = 546 bits (1406), Expect = e-152, Method: Compositional matrix adjust.
Identities = 307/679 (45%), Positives = 430/679 (63%), Gaps = 39/679 (5%)
Query: 51 DSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATS 109
+ IR FL+++A +GH+++ S+ LVP DPT++ +GM+QFK +F G R RA T+
Sbjct: 5 NDIRSTFLNYFAKQGHEIVDSSPLVPRNDPTLMFVNSGMVQFKNLFTGVETRDYQRATTA 64
Query: 110 QRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANR 165
Q+C+R ND++NVG T+RHHTFFEMLGNFSFGDYFK++AI +AWE T EFG+ NR
Sbjct: 65 QKCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKEDAIPFAWELITKEFGIDKNR 124
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDR- 224
L +VY DDEAF IW K++GVP + I R+ DNFW G TGPCGPC+EI+YD H D
Sbjct: 125 LLTTVYHTDDEAFAIW-KKLGVPEDRIIRIDTADNFWQMGPTGPCGPCTEIFYD-HGDHI 182
Query: 225 --GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPN 282
G D RFIE +N+VFMQ K +DGS+ PL ++IDTG+GLERI +LQ +
Sbjct: 183 WGGPPGSPEEDGDRFIEIWNVVFMQNEKFEDGSMTPLDMQSIDTGMGLERIGALLQGSHD 242
Query: 283 NYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGY 342
NY+TDL +I+ + A+V+ + N++ ++I DHLR+ +L++DGV PSN GRGY
Sbjct: 243 NYDTDLFKSLIEAS---ADVTSSDPYGDQNVHHRVIADHLRSTSFLMADGVMPSNDGRGY 299
Query: 343 VVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEE- 401
V+RR++RRA+R LLG K L A + + EL + Q ++EE
Sbjct: 300 VLRRIMRRAMRHAHLLGAKDPVMHRLVPALVQQMGAAYPEL---------GQAQSMIEET 350
Query: 402 LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKE 461
LK EE RF QTLERG KLLD D +S E +P G AF LYDTFGFP+++T++
Sbjct: 351 LKLEETRFKQTLERGLKLLD----DEVSGLDEGAPLP---GSAAFKLYDTFGFPLDLTQD 403
Query: 462 VAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSA--DLAEKIPDTEFLGYDTLS 519
E G VD GFD M Q+ +++AA + D + D+A+K T+FLGY+T
Sbjct: 404 ALREKGREVDTDGFDSAMAEQKAKARAAWAGSGEAADSTVWFDIADKHGATDFLGYETEI 463
Query: 520 AKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVV 579
A+ V +L+ +G V + G V+++LN+TPFYAESGGQ+GD G + V G +V
Sbjct: 464 AEGQVVALVKDGGEVSEAGLGDKVQLVLNQTPFYAESGGQVGDSGEIRVDGG------LV 517
Query: 580 EVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVI 639
+V D KKS G VF+H G + EG++ G + +VDP R + +H+ATHLL AL + +
Sbjct: 518 QVSDTKKSAG-VFIHIGQVVEGLVTAGAPAQLVVDPTRRSAIRANHSATHLLHEALLEAL 576
Query: 640 GQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKR 699
G+ +Q GSL A DRLRFDF+ + L D EL ++ +N +I ++T++M DDA+
Sbjct: 577 GEHVAQRGSLNADDRLRFDFSHTKALSDAELCQVSADVNAFIRQNTPVETRIMTPDDARA 636
Query: 700 AGAIAMFGEKYGEQVKISS 718
GA A+FGEKYG++V++ S
Sbjct: 637 LGAQALFGEKYGDEVRVVS 655
>gi|414161985|ref|ZP_11418232.1| alanyl-tRNA synthetase [Afipia felis ATCC 53690]
gi|410879765|gb|EKS27605.1| alanyl-tRNA synthetase [Afipia felis ATCC 53690]
Length = 886
Score = 546 bits (1406), Expect = e-152, Method: Compositional matrix adjust.
Identities = 301/684 (44%), Positives = 425/684 (62%), Gaps = 46/684 (6%)
Query: 51 DSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATS 109
+ IR FL+F+A GH+++PS+ LVP DPT++ T AGM+QFK +F G R RA TS
Sbjct: 5 NEIRSGFLNFFAKNGHEIVPSSPLVPRNDPTLMFTNAGMVQFKNVFTGLEKRPYQRATTS 64
Query: 110 QRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANR 165
Q+C+R ND++NVG T+RHHTFFEMLGNFSFG+YFK AI+ AW T +F LP +R
Sbjct: 65 QKCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGNYFKDRAIELAWTLITKDFALPKDR 124
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDR- 224
L ++VY +DDEAF++W K G+P I R+G DNFW G TGPCGPCSEI++D H D+
Sbjct: 125 LLVTVYAEDDEAFDLWKKIAGLPESKIIRIGTSDNFWQMGDTGPCGPCSEIFFD-HGDKV 183
Query: 225 -----GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQK 279
G D D GD RFIE +NLVFMQ+++ G+ PL +IDTG+GLER+A +LQ
Sbjct: 184 PGGPPGSPDED-GD--RFIEIWNLVFMQFDQIAPGNRNPLPHPSIDTGMGLERVAAVLQG 240
Query: 280 VPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIG 339
+NYE DL +I+ SEL A + +L++I DHLRA +L++DGV PSN G
Sbjct: 241 KHDNYEIDLFVALIRAISELTG---ADPHGPMAPSLRVIADHLRASSFLIADGVLPSNEG 297
Query: 340 RGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRIL 399
RGYV+RR++RRA+R +LLG K L A + + + EL V+A E I
Sbjct: 298 RGYVLRRIMRRAMRHAQLLGAKDPLMHRLVWALVREMGQAYPEL-------VRA-EALIE 349
Query: 400 EELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEIT 459
E LK EE RF +TL+RG +LD+ S + G + G+ AF LYDT+GFP+++T
Sbjct: 350 ETLKLEETRFRKTLDRGLAILDEK-----SASLHKGDM--FDGETAFTLYDTYGFPLDLT 402
Query: 460 KEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSAD-----LAEKIPDTEFLG 514
++ G+ VD+ F ME Q+ +++A+ S D +A+ L E++ TEFLG
Sbjct: 403 QDALRNRGIGVDLASFTDAMERQKAKARASWAG---SGDTAAEKIWFPLREELGATEFLG 459
Query: 515 YDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQ 574
YDT A+ +V +L+ +G V + G V+LN+TPFY ESGGQ+GD G L T
Sbjct: 460 YDTEIAEGVVTALVKDGASVDSLKAGDSASVVLNQTPFYGESGGQVGDIGLL-----TGD 514
Query: 575 QTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAA 634
V D +K G +FVH G + +G L+ G ++ VD R + +H+ATHLL A
Sbjct: 515 GGVRFRVTDTQKKAGDLFVHVGQLEQGTLKKGAALQLEVDHARRGAIRANHSATHLLHEA 574
Query: 635 LKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMAL 694
L++V+G +Q GSLV+ +RLRFDF +P+ EL IE + N + + + T++M +
Sbjct: 575 LRQVLGDHIAQRGSLVSPERLRFDFAHTKPITADELRRIEDIANDIVLENGEVATRLMGI 634
Query: 695 DDAKRAGAIAMFGEKYGEQVKISS 718
+DA+ +GA A+FGEKYG++V++ S
Sbjct: 635 EDARSSGARALFGEKYGDEVRVVS 658
>gi|375134044|ref|YP_004994694.1| alanyl-tRNA synthetase [Acinetobacter calcoaceticus PHEA-2]
gi|325121489|gb|ADY81012.1| alanyl-tRNA synthetase [Acinetobacter calcoaceticus PHEA-2]
Length = 883
Score = 546 bits (1406), Expect = e-152, Method: Compositional matrix adjust.
Identities = 299/683 (43%), Positives = 429/683 (62%), Gaps = 50/683 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FL ++ ++GH + S+SLVP DPT+L T AGM QFK FLG R RA TSQ+
Sbjct: 11 IREAFLRYFETQGHTRVASSSLVPANDPTLLFTNAGMNQFKDCFLGLEKRDYVRATTSQK 70
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND++NVG T+RHHTFFEMLGNFSFGDYFK++A+++AWEF T E LP ++
Sbjct: 71 CVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKRDALKFAWEFLTSEQWLALPKDK 130
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
L+ +VY DDEA++IWNKE+G+ E I R+G A DNFW G TGPCGPCSEI++
Sbjct: 131 LYATVYHTDDEAYDIWNKEIGLAPERIIRIGDNKGEKYASDNFWAMGDTGPCGPCSEIFF 190
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D RFIE +N VFMQ+N+ DG L PL ++DTG+GLERI+
Sbjct: 191 D-HGDHIWGGLPGSPEEDGDRFIEIWNNVFMQFNRTADGVLHPLPAPSVDTGMGLERISA 249
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL ++K A+ + + D+ +L+++ DH R+ +L++DGV P
Sbjct: 250 VLQHVNSNYDIDLFQHLLKAAANIIGIE-----DQGQPSLRVVADHARSCCFLIADGVNP 304
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN GRGYV+RR+IRRAVR G LG G F + + IE+ ++ AR+
Sbjct: 305 SNEGRGYVLRRIIRRAVRHGNKLGATG--------TFFYKMLQPLIEVMGDAYPELAARK 356
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
I L REE +F +TLE+G KLL+ LA +T + G F LYDT+GFP
Sbjct: 357 DVIEATLIREEEQFAKTLEQGLKLLEGELAQLKDKT--------IPGATVFKLYDTYGFP 408
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGY 515
++T ++A E +D GF++EM QR Q A +A K +VD + ++ + +T+F GY
Sbjct: 409 TDLTADIARERDFIIDEAGFEVEMAAQR---QRARDAGKFAVDYN-NIVKVEGETQFDGY 464
Query: 516 DTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQ 575
+ + + ++ +G V +VS+G + ++LN+TPFYAESGGQIGD G +
Sbjct: 465 INTTGQGQIVAIYKDGVQVDEVSEGDEALIVLNQTPFYAESGGQIGDTGIF------KNE 518
Query: 576 TAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAAL 635
T + EV+D KKS G FVH+G + G L+ + VEAIV +R+ +H+ATHLL AAL
Sbjct: 519 TGIFEVQDTKKS-GGAFVHQGIVTVGSLKADQNVEAIVKADIREATARNHSATHLLHAAL 577
Query: 636 KKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALD 695
++++G Q GSLVA D LRFDF +P+ +L+++ERL+N I + + T+++ ++
Sbjct: 578 RQILGSHVQQKGSLVASDILRFDFANDQPVTFEQLQQVERLVNAEIIANSAVTTELLDIE 637
Query: 696 DAKRAGAIAMFGEKYGEQVKISS 718
AK GA+ +FGEKYG++V++ S
Sbjct: 638 AAKAKGAMMLFGEKYGDEVRVLS 660
>gi|357414541|ref|YP_004926277.1| alanyl-tRNA synthetase [Streptomyces flavogriseus ATCC 33331]
gi|320011910|gb|ADW06760.1| alanyl-tRNA synthetase [Streptomyces flavogriseus ATCC 33331]
Length = 889
Score = 546 bits (1406), Expect = e-152, Method: Compositional matrix adjust.
Identities = 301/678 (44%), Positives = 428/678 (63%), Gaps = 33/678 (4%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQRC 112
IR+R+L F+ RGH V+PSASL+ +DPT+LL AGM+ FKP FLG+V PR + Q+C
Sbjct: 6 IRRRWLSFFEERGHTVVPSASLIADDPTLLLVPAGMVPFKPYFLGEVKPPAPRVTSVQKC 65
Query: 113 IRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFST--VE---FGLPANRLW 167
+RT D+E VG+T+RH TFF+M GNFSFGDYFK+ AI++AW T VE FGL RLW
Sbjct: 66 VRTPDIEEVGKTTRHGTFFQMCGNFSFGDYFKEGAIEFAWAALTNSVEEGGFGLDPERLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCS 227
I+VY DDDEA +IW +++GVP E I+R+G DNFW+ G GPCGPCSEI YD P+ G
Sbjct: 126 ITVYLDDDEAEQIWREKIGVPAERIQRLGKKDNFWSMGVPGPCGPCSEINYDRGPEFGVE 185
Query: 228 DVDLGDDTRFIEFYNLVFMQY------NKKDDGSLEPLKQKNIDTGLGLERIARILQKVP 281
+D R++E +NLVFMQY K+D L L +NIDTGLGLER+A ILQ V
Sbjct: 186 GGPAVNDERYVEIWNLVFMQYERGAGDGKEDFPILGDLPSQNIDTGLGLERLAMILQGVQ 245
Query: 282 NNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRG 341
N YETD + ++ KA+EL V Y ++ ++++L+++ DH+R V L+ DGV P N GRG
Sbjct: 246 NMYETDTLRVVMDKATELTGVRYG-ADQGSDVSLRVVADHVRTSVMLIGDGVTPGNEGRG 304
Query: 342 YVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEE 401
YV+RR++RRA+R RL+G G +L + ++ ++ EL T +RI
Sbjct: 305 YVLRRIMRRAIRNMRLMGATGPVVRDLVDVVVDTMGQQYPELITD--------RKRIETV 356
Query: 402 LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKE 461
EE F++ L+ G +LD A++ T+ +G L+G AFLL+DT+GFP+++T E
Sbjct: 357 ALAEEAAFLKALKGGTNILDT----AVTETKAAGG-KVLAGDKAFLLHDTWGFPIDLTLE 411
Query: 462 VAEEHGVSVDMKGFDIEMENQR-RQSQAAHNAVKLSVDDSA--DLAEKIPDTEFLGYDTL 518
+A E G+SVD GF M+ QR R A D SA ++A++ TEF GY ++
Sbjct: 412 MAAEQGLSVDEDGFRRLMKEQRERAKADAKAKKTGHADLSAYREVADRSGVTEFTGYASI 471
Query: 519 SAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAV 578
++ + LLV+G P ++G +VEV+L+RTPFYAE GGQ+ D G + + G AV
Sbjct: 472 EGESKIVGLLVDGVPSPAATEGDEVEVVLDRTPFYAEGGGQLADQGRIKLDSG-----AV 526
Query: 579 VEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKV 638
++V+DV++ + V VHKG+++ G + VG A +D R+ H+ATHL AL+
Sbjct: 527 IQVRDVQQPVPGVSVHKGSVQVGEVTVGASAYAAIDNTRRRAIARAHSATHLTHQALRDA 586
Query: 639 IGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAK 698
+G +QAGS + R RFDF + T L ++E+ IN + +Q +VM++DDAK
Sbjct: 587 LGPTAAQAGSENSPGRFRFDFGSPAAVPGTVLTDVEQKINEVLSRELDVQAEVMSIDDAK 646
Query: 699 RAGAIAMFGEKYGEQVKI 716
+ GAIA FGEKYGE+V++
Sbjct: 647 KQGAIAEFGEKYGERVRV 664
>gi|348026436|ref|YP_004766241.1| alanyl-tRNA synthetase [Megasphaera elsdenii DSM 20460]
gi|341822490|emb|CCC73414.1| alanine--tRNA ligase [Megasphaera elsdenii DSM 20460]
Length = 869
Score = 546 bits (1406), Expect = e-152, Method: Compositional matrix adjust.
Identities = 295/669 (44%), Positives = 412/669 (61%), Gaps = 37/669 (5%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
+G+ IRK +L F+ S+ H +L S L+PE DP++LL AGM KP F GK+ R
Sbjct: 5 TGNEIRKAYLQFFKSKEHLILHSFPLIPENDPSLLLIGAGMAPLKPYFTGKLVPPSYRVT 64
Query: 108 TSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
TSQ+CIRT+D++NVGRT+RHHTFFEMLGNFSFG+YFKKEAI WAWEF T L ++L+
Sbjct: 65 TSQKCIRTDDIDNVGRTARHHTFFEMLGNFSFGNYFKKEAISWAWEFLTKVLELDTDKLY 124
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCS 227
+++Y DD EA++ W+ +G+ E I + DDNFW G GPCGP SEI+YD P+RGC
Sbjct: 125 VTIYPDDKEAYDYWHNMIGLADERIFKF--DDNFWEIG-EGPCGPDSEIFYDLGPERGCG 181
Query: 228 D--VDLGDDT-RFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNY 284
+G D R++E +NLVF QYN+ DG EPL +KNIDTG GLER+A ++Q+ +N+
Sbjct: 182 KPTCTVGCDCDRYLEIWNLVFTQYNRTKDGKYEPLAKKNIDTGCGLERLASVIQQKESNF 241
Query: 285 ETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVV 344
ETDLIFPII+K ++ Y S+ R + +K+I DH+RAI +++SDG+ PSN GRGYV+
Sbjct: 242 ETDLIFPIIEKVIAISGGDY--SDPRQKMAMKVIADHIRAITFMISDGILPSNEGRGYVL 299
Query: 345 RRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKR 404
RR++RRAVR GRLLGI + FL + + +++ + + E I + +
Sbjct: 300 RRILRRAVRFGRLLGI--------QDLFLAGLVDTVLDILGDEYPETREHEALIKQIINT 351
Query: 405 EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAE 464
EE +F TL +G +LL+ M+A G L+G + F LYDT+GFP+E+T+E+A
Sbjct: 352 EEKQFSATLAQGMELLNDMMAHV-------GDDKVLTGAEVFKLYDTYGFPMELTEEIAG 404
Query: 465 EHGVSVDMKGFDIEMENQRRQSQAAHNAV--KLSVDDSADLAEKIPDTEFLGYDTLSAKA 522
E G VD GF M+ Q+ +++AAH V K++ D+ L D L D + KA
Sbjct: 405 EQGFKVDKDGFQAAMKEQQDRARAAHTKVSAKVATPDTTKL-----DQSKLVNDESAVKA 459
Query: 523 IVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVK 582
+ + +G + + G +V ++L+ PF+AE GGQ+ D G L +G +V
Sbjct: 460 TIAMIGKDGVEISEARDGQEVTIILDDNPFHAEGGGQLSDTGVLCAAEGK------AKVT 513
Query: 583 DVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQE 642
D + + I EGVL G V+ VD + +HTATHLLQAAL+KV+G
Sbjct: 514 DAQALPNGLVYLIAEITEGVLRTGDAVDIAVDKQRHLNLARNHTATHLLQAALRKVLGNH 573
Query: 643 TSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGA 702
+QAGSLV D LRFDF P+ EL++IE L+N I + + MALD AK GA
Sbjct: 574 VNQAGSLVTPDHLRFDFTHFSPVTQAELDKIEALVNEEILKNVPVTIEEMALDAAKEKGA 633
Query: 703 IAMFGEKYG 711
+A+FGEKYG
Sbjct: 634 MALFGEKYG 642
>gi|381196651|ref|ZP_09903993.1| alanyl-tRNA synthetase [Acinetobacter lwoffii WJ10621]
Length = 892
Score = 546 bits (1406), Expect = e-152, Method: Compositional matrix adjust.
Identities = 299/692 (43%), Positives = 434/692 (62%), Gaps = 54/692 (7%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FL ++ S+GH + S+SLVP DPT+L T AGM QFK FLG R RA +SQ+
Sbjct: 6 IREAFLSYFESQGHTRVASSSLVPANDPTLLFTNAGMNQFKDCFLGLEKRDYVRAVSSQK 65
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND++NVG T+RHHTFFEMLGNFSFGDYFK++AI++AW+F T E LP ++
Sbjct: 66 CVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKRDAIKFAWDFLTGEAWLALPKDK 125
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
L+ +VY DDEAF+IWNKE+G+ I R+G A DNFW G TGPCGPCSEI++
Sbjct: 126 LYATVYHTDDEAFDIWNKEIGLDASRIIRIGDNKGGQYASDNFWAMGDTGPCGPCSEIFF 185
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D RFIE +N VFMQ+N+ DG L PL ++DTG+GLERI+
Sbjct: 186 D-HGDHIWGGLPGTPEEDGDRFIEIWNNVFMQFNRTADGVLHPLPAPSVDTGMGLERISA 244
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTN---------LNLKIIGDHLRAIV 326
+LQ V +NYE DL ++K A+E+ + A + +LK++ DH R+
Sbjct: 245 VLQHVNSNYEIDLFQHLLKAAAEIIGLDTAAHEAEASEKGTPVQYPASLKVVADHARSCS 304
Query: 327 YLLSDGVFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTH 386
+L++DGV PSN GRGYV+RR+IRRAVR G LG G +F + + IE+
Sbjct: 305 FLIADGVNPSNEGRGYVLRRIIRRAVRHGNKLGATG--------SFFHKMLQPLIEVMGQ 356
Query: 387 IDSDVKAREQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAF 446
+++ ++ RI +L +EE +F +TLE+G KLL+ LA + GSV + G+ F
Sbjct: 357 AYPELETQKVRIEAQLLKEEEQFAKTLEQGLKLLEGELA------QLKGSV--IPGEVVF 408
Query: 447 LLYDTFGFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEK 506
LYDT+GFP ++T ++A E +++D GF++EM QR Q A +A K ++D ++ + +
Sbjct: 409 KLYDTYGFPTDLTADIARERDLTIDETGFEVEMAAQR---QRARDAGKFAIDYNS-VVKV 464
Query: 507 IPDTEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFL 566
+T+F GYD + + ++ G+ V ++ +G + ++LN+TPFYAESGGQIGD G
Sbjct: 465 EGETQFNGYDATVGEGQIIAIYKYGEQVDEIVEGDEALIVLNQTPFYAESGGQIGDTGIF 524
Query: 567 YVTQGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHT 626
T + EV+D KKS G FVH+G + G +++ + VEA V +R +H+
Sbjct: 525 ------KNDTGIFEVQDTKKS-GGAFVHQGIVTVGSIKLAQNVEATVKADIRAATARNHS 577
Query: 627 ATHLLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANL 686
ATHLL AAL++++G+ Q GSLVA D LRFDF +P+ +L+EIERL+N +
Sbjct: 578 ATHLLHAALRQILGEHVQQKGSLVASDILRFDFANDQPVSFEQLQEIERLVNAEVIANTA 637
Query: 687 LQTKVMALDDAKRAGAIAMFGEKYGEQVKISS 718
+ T+++ ++ AK GA+ +FGEKYG++V++ S
Sbjct: 638 VSTELLDIESAKAKGAMMLFGEKYGDEVRVLS 669
>gi|333925650|ref|YP_004499229.1| alanyl-tRNA synthetase [Serratia sp. AS12]
gi|333930603|ref|YP_004504181.1| alanyl-tRNA synthetase [Serratia plymuthica AS9]
gi|386327474|ref|YP_006023644.1| alanyl-tRNA synthetase [Serratia sp. AS13]
gi|333472210|gb|AEF43920.1| alanyl-tRNA synthetase [Serratia plymuthica AS9]
gi|333489710|gb|AEF48872.1| alanyl-tRNA synthetase [Serratia sp. AS12]
gi|333959807|gb|AEG26580.1| alanyl-tRNA synthetase [Serratia sp. AS13]
Length = 875
Score = 546 bits (1406), Expect = e-152, Method: Compositional matrix adjust.
Identities = 315/691 (45%), Positives = 437/691 (63%), Gaps = 70/691 (10%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA TSQR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRAYSRATTSQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AI +AWE T E F LP R
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAISYAWELLTGENWFNLPKER 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEAF+IW K++GVP E I R+G A DNFW G TGPCGPC+EI+Y
Sbjct: 128 LWVTVYETDDEAFDIWQKQIGVPAERIIRIGDNKGAAFASDNFWQMGDTGPCGPCTEIFY 187
Query: 219 DFHPDR------GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLER 272
D H D G ++ D GD R+IE +N+VFMQ+N++ DG++ PL + ++DTG+GLER
Sbjct: 188 D-HGDHIWGGPPGSAEED-GD--RYIEIWNIVFMQFNRQSDGTMLPLPKPSVDTGMGLER 243
Query: 273 IARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDG 332
IA +LQ V +NYE DL +I +++ D N +L++I DH+R+ +L+SDG
Sbjct: 244 IAAVLQHVNSNYEIDLFSKLITAVAKVTGAV-----DLDNKSLRVIADHIRSCAFLVSDG 298
Query: 333 VFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVK 392
V PS+ GRGYV+RR+IRRA+R G +LG K +F + IE+ ++K
Sbjct: 299 VMPSSEGRGYVLRRIIRRAIRHGNMLGAKE--------SFFYKLVAPLIEVMGPAADELK 350
Query: 393 AREQRILEE-LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDT 451
R+Q ++E+ LK EE +F +TLERG LLD+ LA+ T L G+ AF LYDT
Sbjct: 351 -RQQSLVEKVLKTEEDQFARTLERGLALLDEELANLQGDT--------LDGEAAFRLYDT 401
Query: 452 FGFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQ------AAHNAVKLSVDDSADLAE 505
+GFPV++T +V E G+ VD GF+ ME QRR+++ A +N++ + VD +
Sbjct: 402 YGFPVDLTADVCRERGLKVDEAGFEQAMEAQRRRARESSGFGADYNSM-IRVDGA----- 455
Query: 506 KIPDTEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGF 565
++F GYD +A V +L +G+PV ++ G + V+L+ TPFY ESGGQ+GD G
Sbjct: 456 ----SQFSGYDHEEQQATVTALFRDGQPVDEIHAGEEAVVVLDETPFYGESGGQVGDKGV 511
Query: 566 LYVTQGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHH 625
L A V D +K G H+G + GVL+V V+A +D R R +++H
Sbjct: 512 LKAV------GADFVVSDTQK-YGQAIGHQGKLSHGVLKVKDRVDAQIDIARRNRIRLNH 564
Query: 626 TATHLLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDAN 685
+ATHLL AAL++ +G+ +Q GSLV LRFDF+ + ++ +E L+N +
Sbjct: 565 SATHLLHAALRQTLGEHVAQKGSLVNDKYLRFDFSHFEAMKPEQIRVVEDLVNQQVRRNL 624
Query: 686 LLQTKVMALDDAKRAGAIAMFGEKYGEQVKI 716
+QT+VMALDDAK GA+A+FGEKY + V++
Sbjct: 625 PVQTEVMALDDAKEKGAMALFGEKYDDSVRV 655
>gi|365848108|ref|ZP_09388588.1| alanine--tRNA ligase [Yokenella regensburgei ATCC 43003]
gi|364571502|gb|EHM49089.1| alanine--tRNA ligase [Yokenella regensburgei ATCC 43003]
Length = 875
Score = 546 bits (1406), Expect = e-152, Method: Compositional matrix adjust.
Identities = 308/689 (44%), Positives = 434/689 (62%), Gaps = 62/689 (8%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR+ FLDF+ S+GH+V+ S+SLVP DPT+L T AGM QFK +FLG R RA T+QR
Sbjct: 8 IRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTAQR 67
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVE--FGLPANR 165
C+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK +AI +AWE T E F LP ++
Sbjct: 68 CVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAINYAWELLTGENWFNLPKDK 127
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYY 218
LW++VYE DDEAFEIW EVGVP E I R+G A DNFW G TGPCGPC+EI++
Sbjct: 128 LWVTVYETDDEAFEIWANEVGVPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFF 187
Query: 219 DFHPDR---GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
D H D G D R+IE +N+VFMQ+N++ DG++EPL + ++DTG+GLERIA
Sbjct: 188 D-HGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAA 246
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ V +NY+ DL +I+ +++ + D +N +L++I DH+R+ +L++DGV P
Sbjct: 247 VLQHVNSNYDIDLFRTLIQAVAKVTGAT-----DLSNKSLRVIADHIRSCAFLIADGVMP 301
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN RGYV+RR+IRRA+R G +LG K F + +++ ++K ++
Sbjct: 302 SNESRGYVLRRIIRRAIRHGNMLGAKD--------TFFYKLVGPLVDVMGAAGEELKRQQ 353
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
++ + LK EE +F +TLERG LLD+ LA T L G+ AF LYDT+GFP
Sbjct: 354 AQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDT--------LDGETAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQ------AAHNAVKLSVDDSADLAEKIPD 509
V++T +V E + VD GF+ ME QRR+++ A +NA+ + VD++
Sbjct: 406 VDLTADVCRERNIKVDEAGFEAAMEEQRRRARESSGFGADYNAM-IRVDEA--------- 455
Query: 510 TEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVT 569
+EF GYD L V +L ++GK V V+ G + V+L++TPFYAESGGQ+GD G L
Sbjct: 456 SEFKGYDNLELNGKVTALFIDGKAVDSVNAGQEAVVVLDQTPFYAESGGQVGDKGEL--- 512
Query: 570 QGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATH 629
+G V + + +++G H G + G L+VG V+A VD R R +++H+ATH
Sbjct: 513 KGAGFAFTVTDTQKYGQAIG----HLGKLATGSLKVGDAVQADVDEARRARIRLNHSATH 568
Query: 630 LLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQT 689
L+ AAL++V+G +Q GSLV LRFDF+ + E+ +E L+N I ++T
Sbjct: 569 LMHAALRQVLGTHVAQKGSLVNDKALRFDFSHFEAMKPEEIRAVEDLVNAQIRRNLPIET 628
Query: 690 KVMALDDAKRAGAIAMFGEKYGEQVKISS 718
KVM L+ AK GA+A+FGEKY + V++ S
Sbjct: 629 KVMDLEAAKAKGAMALFGEKYDDHVRVLS 657
>gi|352081860|ref|ZP_08952702.1| alanyl-tRNA synthetase [Rhodanobacter sp. 2APBS1]
gi|351682766|gb|EHA65862.1| alanyl-tRNA synthetase [Rhodanobacter sp. 2APBS1]
Length = 880
Score = 546 bits (1406), Expect = e-152, Method: Compositional matrix adjust.
Identities = 308/683 (45%), Positives = 428/683 (62%), Gaps = 46/683 (6%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR FLD++ S+GH ++PS+SLVP DPT+L T +GM+QFK +FLG RAA QR
Sbjct: 6 IRSAFLDYFRSKGHTIVPSSSLVPASDPTLLFTNSGMVQFKNVFLGSEKLSYVRAADVQR 65
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
C+R ND++ VG T+RHHTFFEMLGN+SFGDYFK++AI +AWE T F LPA++LW
Sbjct: 66 CLRAGGKHNDLDAVGYTARHHTFFEMLGNWSFGDYFKRDAIAYAWELLTQVFKLPADKLW 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYYDF 220
+++Y DDEAF+IWNK+VGVP E I R+G A DNFW TGPCGPC+EI+YD
Sbjct: 126 VTIYHTDDEAFDIWNKQVGVPAERIVRIGDNKGAPYASDNFWQMADTGPCGPCTEIFYDH 185
Query: 221 HP-----DRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIAR 275
G D D GD R+IE +NLVFMQ+++ DG+L PL +DTG+GLER+A
Sbjct: 186 GAAIAGGPPGSPDED-GD--RYIEIWNLVFMQFDRAPDGTLSPLPAPCVDTGMGLERLAA 242
Query: 276 ILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFP 335
+LQ +NYE DL +I+ A EL + D N +L++I DH+RA +L+ DGV P
Sbjct: 243 VLQHKHSNYEIDLFAHLIRVAGELTG-----TKDLGNKSLRVIADHIRACSFLIVDGVLP 297
Query: 336 SNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKARE 395
SN GRGYV+RR+IRRA+R G +LG++GD F + + +E ++ A++
Sbjct: 298 SNEGRGYVLRRIIRRALRHGWMLGVRGD--------FFWKMVQPLVEEMGEAYPELPAKQ 349
Query: 396 QRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFP 455
+ + L+ EE RF +TLE G +L D D +++R + S +SG DAF LYDT+GFP
Sbjct: 350 AFVEDALRTEEHRFGETLEHGMRLFD----DIANKSRAAKSGETISGVDAFRLYDTYGFP 405
Query: 456 VEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGY 515
V++T ++A E G+ VDM GF+ M QR +++AA + A+LA ++ T FLGY
Sbjct: 406 VDLTADIARERGLEVDMAGFEQAMNEQRARARAA-GKFEAKGQMPAELASELKPTIFLGY 464
Query: 516 DTL-SAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQ 574
+ L S + V ++ GK V ++ +G + ++L+RTPFYAESGGQ+GD G L G
Sbjct: 465 EALQSEGSKVLGIVRGGKQVDQLGEGEEGLLILDRTPFYAESGGQVGDTGTLSNAAGR-- 522
Query: 575 QTAVVEVKDVKKSLGSVFVHKGTIREG-VLEVGREVEAIVDPKLRQRAKVHHTATHLLQA 633
EV D K G F H G G L G VEA VD RQ ++H+ATHLL A
Sbjct: 523 ----FEVADTLKMGGVFFGHAGRWHGGRPLRTGDTVEARVDASRRQAIVLNHSATHLLHA 578
Query: 634 ALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMA 693
AL++V+G +Q GSLVA +RLRFDF+ H+P+ E+ +E ++N + + M
Sbjct: 579 ALRQVLGTHVAQKGSLVAPERLRFDFSHHKPMSHDEVARVEAMVNAEVRRNAAAEVHNMG 638
Query: 694 LDDAKRAGAIAMFGEKYGEQVKI 716
D A GA+A+FGEKYG++V++
Sbjct: 639 YDQAIEFGAMALFGEKYGDEVRV 661
>gi|220929512|ref|YP_002506421.1| alanyl-tRNA synthetase [Clostridium cellulolyticum H10]
gi|219999840|gb|ACL76441.1| alanyl-tRNA synthetase [Clostridium cellulolyticum H10]
Length = 879
Score = 546 bits (1406), Expect = e-152, Method: Compositional matrix adjust.
Identities = 285/672 (42%), Positives = 432/672 (64%), Gaps = 27/672 (4%)
Query: 51 DSIRKRFLDFYASRGHKVLPSASLVPE-DPTVLLTIAGMLQFKPIFLGKVPRQVPRAATS 109
+ +R+R+L F+ S+GH LPSA LVP+ DP++LL +GM KP F G+ R T
Sbjct: 7 NELRERYLKFFESKGHLRLPSAPLVPKNDPSLLLINSGMAPLKPFFTGQEEPPRKRVTTC 66
Query: 110 QRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWIS 169
Q+CIRT D+ENVG+T+RH T+FEMLGNFSFGDYFK EAI WAWEF T + +P ++LW++
Sbjct: 67 QKCIRTPDIENVGKTARHGTYFEMLGNFSFGDYFKNEAIPWAWEFVTKDLEMPVDKLWVT 126
Query: 170 VYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCS-- 227
+YEDDDEAF+IW+K VG+P E I RMG DNFW G GPCGPCSEIY+D P++GC
Sbjct: 127 IYEDDDEAFDIWHKVVGLPAERIVRMGKKDNFWEHG-IGPCGPCSEIYFDRGPEKGCGSP 185
Query: 228 DVDLGDDT-RFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYET 286
D +G + R++EF+N VF Q+NK + G+ L NIDTG+GLER+A I Q V N +E
Sbjct: 186 DCKVGCECDRYVEFWNNVFTQFNKDEQGNYTRLAHPNIDTGMGLERLACISQDVDNLFEV 245
Query: 287 DLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRR 346
D ++ I++ + A V Y +S ++T+++++++ DH+R+ ++ DGV PSN GRGYV+RR
Sbjct: 246 DTVWNILEFICKTAGVEYKKS-EKTDVSIRVVTDHIRSTTMMVCDGVLPSNEGRGYVLRR 304
Query: 347 LIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREE 406
L+RRA R GRLLGI FL +A I S ++ + I + +K EE
Sbjct: 305 LLRRAARHGRLLGIN--------KPFLYDVAMVVINESKEAYPELAEKADYIKKVIKIEE 356
Query: 407 LRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEH 466
RF T+++G +L++ + + + + +P G+ F L+DT+GFP+++T+E+AEE+
Sbjct: 357 ERFEATVDQGIIILNEFIDEI--KAEKQNVIP---GEMVFKLHDTYGFPLDLTREIAEEN 411
Query: 467 GVSVDMKGFDIEMENQRRQSQAAHNAVKLSV--DDSADLAEKIPDTEFLGYDTLSAKAIV 524
G+ +D +GF EM+ QR++++ AHN+ S D D +K T F+GY+ ++ +++
Sbjct: 412 GLGIDEEGFKREMDAQRKKARDAHNSKDTSAWSDSVYDKLDKSQKTAFVGYENTASDSVI 471
Query: 525 ESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDV 584
++ +G+ V +G ++ V+L++TPFYAE GGQ+GD G L G V++++
Sbjct: 472 LYIVKDGEIVDTAQEGDEITVILDKTPFYAEMGGQVGDTGILTAQNGK------VKIENC 525
Query: 585 KKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETS 644
K+ F+H G + G++E G + A +D K R +HT THLL AL+ V+G
Sbjct: 526 TKTADGKFLHTGFVETGIVETGSTITASIDEKRRIAINRNHTVTHLLHKALRTVLGDHVH 585
Query: 645 QAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIA 704
QAGSLV ++LRFDF+ + EL+++E + N I + + K M++D+AK+ GA+A
Sbjct: 586 QAGSLVEPNKLRFDFSHFSAMTPEELKKVEDITNEVILSSMNVNIKEMSIDEAKKLGALA 645
Query: 705 MFGEKYGEQVKI 716
+FGEKYG V++
Sbjct: 646 LFGEKYGNTVRV 657
>gi|291286777|ref|YP_003503593.1| alanyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
gi|290883937|gb|ADD67637.1| alanyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
Length = 877
Score = 546 bits (1406), Expect = e-152, Method: Compositional matrix adjust.
Identities = 288/679 (42%), Positives = 430/679 (63%), Gaps = 37/679 (5%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAA 107
+G IRK+FL+++A GH+++ S+SLVP +DPT+L T AGM QFK FLG+ R RA
Sbjct: 4 TGQEIRKKFLEYFAEHGHEIVSSSSLVPHDDPTLLFTNAGMNQFKDTFLGRETRSYTRAT 63
Query: 108 TSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPA 163
TSQ+ +R ND+ENVG TSRHHTFFEMLGNFSFGDYFK++AI++ WEF T GLPA
Sbjct: 64 TSQKVVRAGGKHNDLENVGVTSRHHTFFEMLGNFSFGDYFKEDAIKFGWEFLTKVVGLPA 123
Query: 164 NRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPD 223
++++SVY DD+EA +IW +G+ + I+ G DNFW G TGPCGPCSEI+ D
Sbjct: 124 EKMFVSVYNDDEEAAQIWRDVIGLDAKDIEYRGEKDNFWAMGDTGPCGPCSEIHIDQGEH 183
Query: 224 RGCSDVDLGDDT---RFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKV 280
GC D + R +E +NLVFMQYN+ +DG+L PL + +IDTG+GLER+A ++Q V
Sbjct: 184 TGCQSPDCDRNCECDRHLELWNLVFMQYNRSEDGTLTPLPKPSIDTGMGLERVASVVQGV 243
Query: 281 PNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGR 340
+NY+TDL PIIK ++LA Y S ++ N+++++I DH RA +L+ DGV P+N GR
Sbjct: 244 TSNYDTDLFLPIIKYIADLAGKKYGDS-EKDNVSMRVIADHSRAATFLIGDGVLPANDGR 302
Query: 341 GYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILE 400
GYV+RR++RRA+R GR+LG LEGAF + ++ ++ ++ I +
Sbjct: 303 GYVLRRIMRRAMRHGRMLG--------LEGAFFYKVCGFVVDFMKGHYIELADKKPYIAK 354
Query: 401 ELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITK 460
+ EE F +TL G K++D++ L + ++S ++ SG+D F +YDTFGFPV++
Sbjct: 355 VVTNEEQSFSRTLNTGLKIIDEL----LEKNKDSKTI---SGEDIFKMYDTFGFPVDLLA 407
Query: 461 EVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDT---EFLGYDT 517
++AE++G +D GF+ EM Q+ +++ + + AD+ K+ T EF+GY+
Sbjct: 408 DIAEDNGYVLDNAGFEQEMHTQQERAKKSWSGS--GEQRVADVYIKLASTLKSEFVGYEE 465
Query: 518 LSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTA 577
L A++ V +++ N + ++G + +++L +TPFYAE GGQ GD G++ TA
Sbjct: 466 LEAESEVAAIIKNDAQS-ETAEG-ECDIILTKTPFYAEGGGQAGDIGYI------KTDTA 517
Query: 578 VVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKK 637
V +V K + +G GV+++G V+A VD R+ + +HT+TH+L AL+
Sbjct: 518 VFKVTGTHKYGDGMIAMRGFTELGVIKMGETVKAQVDKTARRATERNHTSTHILHKALQM 577
Query: 638 VIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDA 697
V+G QAGS V +RLRFDFN + P+ E+ IE + N I L+ M +DDA
Sbjct: 578 VLGDHVRQAGSQVNPERLRFDFNHYAPVSAEEIMRIEEIANEEIQANTALKKTYMNIDDA 637
Query: 698 KRAGAIAMFGEKYGEQVKI 716
+GA+A+FGEKYG +V++
Sbjct: 638 VNSGAMALFGEKYGNKVRV 656
>gi|326317055|ref|YP_004234727.1| alanyl-tRNA synthetase [Acidovorax avenae subsp. avenae ATCC 19860]
gi|323373891|gb|ADX46160.1| alanyl-tRNA synthetase [Acidovorax avenae subsp. avenae ATCC 19860]
Length = 876
Score = 546 bits (1406), Expect = e-152, Method: Compositional matrix adjust.
Identities = 298/692 (43%), Positives = 409/692 (59%), Gaps = 63/692 (9%)
Query: 47 PSSGDSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPR 105
PSS IRK FLDF+AS+GH V+PS+ LVP DPT++ T +GM+QFK +FLG R R
Sbjct: 7 PSSVADIRKSFLDFFASKGHTVVPSSPLVPGNDPTLMFTNSGMVQFKDVFLGTDKRPYVR 66
Query: 106 AATSQRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGL 161
A + Q C+R ND+ENVG T+RHHTFFEMLGN+SFGDYFK+E+++WAWE T +GL
Sbjct: 67 ATSVQACLRAGGKHNDLENVGYTARHHTFFEMLGNWSFGDYFKRESLKWAWELLTEVYGL 126
Query: 162 PANRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMGAD-------DNFWNSGATGPCGPCS 214
P RL +VY +DDEA++IW KE+G+P E + R+G + DNFW TGPCGPCS
Sbjct: 127 PKERLLATVYAEDDEAYDIWTKEIGLPPERVIRIGDNKGGRYKSDNFWMMADTGPCGPCS 186
Query: 215 EIYYD----------FHPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNI 264
EI+YD PD D RFIE +N VFMQ++ +DGS+ PL +
Sbjct: 187 EIFYDHGPHIPGGPPGSPDE--------DGDRFIEIWNNVFMQFDMAEDGSVTPLPAPCV 238
Query: 265 DTGLGLERIARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRA 324
DTG+GLER+A ILQ V +NYE DL +I+ A + D N +LK+I DH+RA
Sbjct: 239 DTGMGLERLAAILQHVHSNYEIDLFAALIQAAGRETGTA-----DLANPSLKVIADHIRA 293
Query: 325 IVYLLSDGVFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELS 384
+L+SDGV PSN GRGYV RR++RRA+R G LG K F + + ++
Sbjct: 294 TAFLVSDGVIPSNEGRGYVQRRIVRRAIRHGYKLGRK--------TPFFHKLVKDLVQQM 345
Query: 385 THIDSDVKAREQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQD 444
++ +EQRI E LK EE RF +TL G +LD L G L G
Sbjct: 346 GDAYPKLREQEQRITEVLKAEEERFFETLANGMDILDAAL---------GGGAKVLPGDV 396
Query: 445 AFLLYDTFGFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLA 504
AF L+DT+GFP+++T +V E GV+VD GF+ M+ Q+ Q++AA K +D + + A
Sbjct: 397 AFKLHDTYGFPLDLTNDVCRERGVTVDEDGFNAAMDRQKAQARAAG---KFKMDKALEYA 453
Query: 505 EKIPDTEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYG 564
+ F GYD L+ A + ++ V+G + G + V+L+ TPFYAESGGQ+GD G
Sbjct: 454 GEA--NRFSGYDGLAESAKIVAIYVDGTSAQALEAGQNGVVVLDNTPFYAESGGQVGDQG 511
Query: 565 FLYVTQGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVH 624
++ A V D K V+ H G + G L VG V+A VD LR +
Sbjct: 512 VIHAG------GARFAVDDTLKIRADVYGHHGRLESGTLRVGDAVQAEVDAALRAATMRN 565
Query: 625 HTATHLLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDA 684
H+ TH++ AL++V+G Q GSLV +R RFDF + P+ D ++ EIER +N I
Sbjct: 566 HSVTHIMHKALREVLGSHVQQKGSLVNAERTRFDFAHNAPVTDAQIREIERRVNEEILAN 625
Query: 685 NLLQTKVMALDDAKRAGAIAMFGEKYGEQVKI 716
+VM ++ A++ GA+ +FGEKYGE V++
Sbjct: 626 TPTGARVMDIESAQKTGAMMLFGEKYGETVRV 657
>gi|404368668|ref|ZP_10974018.1| alanyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
gi|313687962|gb|EFS24797.1| alanyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
Length = 866
Score = 546 bits (1406), Expect = e-152, Method: Compositional matrix adjust.
Identities = 299/678 (44%), Positives = 433/678 (63%), Gaps = 39/678 (5%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
+G+ IRK F++F+ ++ HK SASL+P+D T+LLT+AGM+ FKP FLG+ PR T
Sbjct: 3 TGNQIRKEFIEFFEAKHHKHFESASLIPDDATLLLTVAGMVPFKPYFLGQKEAPYPRVTT 62
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
Q+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFKKEAI+W+WEF T + ++LW+
Sbjct: 63 YQKCIRTNDLENVGRTARHHTFFEMLGNFSFGDYFKKEAIEWSWEFVTEVLKIDKDKLWV 122
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
SV+ DDEA +IW ++ P E + R+G D+N+W +G TG CGPCSEI+ D P G +
Sbjct: 123 SVFTTDDEAEQIWIEKCNFPKERLVRLGEDENWWAAGPTGSCGPCSEIHVDLGPAYGGDE 182
Query: 229 V----DLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNY 284
D G D RFIE +NLVF ++N+ +DGSLEPL +KNIDTG GLERIA ++Q NN+
Sbjct: 183 NSKLGDEGTDNRFIEIWNLVFTEWNRMEDGSLEPLPKKNIDTGAGLERIAAMVQGKSNNF 242
Query: 285 ETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVV 344
ETDL+FP++++A +L N Y + ++ N +LK+I DH RA+ +L++DGV PSN GRGYV+
Sbjct: 243 ETDLLFPLVEEAVKLTNSQYGR-DEEENFSLKVITDHSRAVTFLINDGVIPSNEGRGYVL 301
Query: 345 RRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKR 404
RR++RRAVR GRLL G+ L FL + +K + + + D+++ I + +K
Sbjct: 302 RRILRRAVRHGRLL-----GQSEL---FLYKMVDKVVSMMENAYPDLRSNIDHIKKVVKI 353
Query: 405 EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAE 464
EE +F +TL++G +L++Q + + + +G + +L G+ F LYDT+GFP E+T+E+ +
Sbjct: 354 EEEKFSRTLDQGMQLVNQ----EIEKLKAAG-ITKLDGEVTFKLYDTYGFPYELTEEICQ 408
Query: 465 EHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDS--ADLAEKIPDTEFLGYDTLSAKA 522
E + + + F+ +M Q+ +++AA V DS + +K TEF GY TL
Sbjct: 409 EKEIEISKEEFEAKMTEQKEKARAAREVVMEKGQDSFIEEFYDKYGATEFTGYTTLKD-- 466
Query: 523 IVESLLVNGKPVIKVSKGSDVEVLL--NRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVE 580
GK ++ G D + L+ + TPFY ESGGQ D G + G + V+
Sbjct: 467 -------TGK-LLSARDGKDGKKLMIFDTTPFYGESGGQAADIG---IITGNGFEGKVI- 514
Query: 581 VKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIG 640
DV+K G +F H + +G G E VD R +HTATHLL AL++V+G
Sbjct: 515 --DVQKQKG-IFTHTVEVLKGTPIEGEEYFLEVDEANRMATAKNHTATHLLHEALREVLG 571
Query: 641 QETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRA 700
QAGS V +RLRFDFN + + ELE++E L+N I +A + M++D+AK+A
Sbjct: 572 SHVQQAGSFVNGERLRFDFNHYEAMTGEELEKVEELVNEKIAEAINVSVADMSMDEAKKA 631
Query: 701 GAIAMFGEKYGEQVKISS 718
GA A+FG+KYG+ V++ S
Sbjct: 632 GATALFGDKYGDVVRVVS 649
>gi|373496502|ref|ZP_09587048.1| alanyl-tRNA synthetase [Fusobacterium sp. 12_1B]
gi|371965391|gb|EHO82891.1| alanyl-tRNA synthetase [Fusobacterium sp. 12_1B]
Length = 866
Score = 546 bits (1406), Expect = e-152, Method: Compositional matrix adjust.
Identities = 299/678 (44%), Positives = 433/678 (63%), Gaps = 39/678 (5%)
Query: 49 SGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAAT 108
+G+ IRK F++F+ ++ HK SASL+P+D T+LLT+AGM+ FKP FLG+ PR T
Sbjct: 3 TGNQIRKEFIEFFEAKHHKHFESASLIPDDATLLLTVAGMVPFKPYFLGQKEAPYPRVTT 62
Query: 109 SQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWI 168
Q+CIRTND+ENVGRT+RHHTFFEMLGNFSFGDYFKKEAI+W+WEF T + ++LW+
Sbjct: 63 YQKCIRTNDLENVGRTARHHTFFEMLGNFSFGDYFKKEAIEWSWEFVTEVLKIDKDKLWV 122
Query: 169 SVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSD 228
SV+ DDEA +IW ++ P E + R+G D+N+W +G TG CGPCSEI+ D P G +
Sbjct: 123 SVFTTDDEAEQIWIEKCNFPKERLVRLGEDENWWAAGPTGSCGPCSEIHVDLGPAYGGDE 182
Query: 229 V----DLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNY 284
D G D RFIE +NLVF ++N+ +DGSLEPL +KNIDTG GLERIA ++Q NN+
Sbjct: 183 NSKLGDEGTDNRFIEIWNLVFTEWNRMEDGSLEPLPKKNIDTGAGLERIAAMVQGKSNNF 242
Query: 285 ETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVV 344
ETDL+FP++++A +L N Y + ++ N +LK+I DH RA+ +L++DGV PSN GRGYV+
Sbjct: 243 ETDLLFPLVEEAVKLTNSQYGR-DEEENFSLKVITDHSRAVTFLINDGVIPSNEGRGYVL 301
Query: 345 RRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKR 404
RR++RRAVR GRLL G+ L FL + +K + + + D+++ I + +K
Sbjct: 302 RRILRRAVRHGRLL-----GQSEL---FLYKMVDKVVSMMENAYPDLRSNIDHIKKVVKI 353
Query: 405 EELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAE 464
EE +F +TL++G +L++Q + + + +G + +L G+ F LYDT+GFP E+T+E+ +
Sbjct: 354 EEEKFSRTLDQGMQLVNQ----EIEKLKAAG-ITKLDGEVTFKLYDTYGFPYELTEEICQ 408
Query: 465 EHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDS--ADLAEKIPDTEFLGYDTLSAKA 522
E + + + F+ +M Q+ +++AA V DS + +K TEF GY TL
Sbjct: 409 EKEIEISKEEFEAKMTEQKEKARAAREVVMEKGQDSFIEEFYDKYGATEFTGYTTLKD-- 466
Query: 523 IVESLLVNGKPVIKVSKGSDVEVLL--NRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVE 580
GK ++ G D + L+ + TPFY ESGGQ D G + G + V+
Sbjct: 467 -------TGK-LLSARDGKDGKKLMIFDTTPFYGESGGQAADIG---IITGNGFEGKVI- 514
Query: 581 VKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIG 640
DV+K G +F H + +G G E VD R +HTATHLL AL++V+G
Sbjct: 515 --DVQKQKG-IFTHTVEVLKGTPIEGEEYFLEVDEANRMATAKNHTATHLLHEALREVLG 571
Query: 641 QETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRA 700
QAGS V +RLRFDFN + + ELE++E L+N I +A + M++D+AK+A
Sbjct: 572 SHVQQAGSFVNGERLRFDFNHYEAMTGEELEKVEELVNEKIAEAINVSVADMSMDEAKKA 631
Query: 701 GAIAMFGEKYGEQVKISS 718
GA A+FG+KYG+ V++ S
Sbjct: 632 GATALFGDKYGDVVRVVS 649
>gi|159044191|ref|YP_001532985.1| alanyl-tRNA synthetase [Dinoroseobacter shibae DFL 12]
gi|205830080|sp|A8LL20.1|SYA_DINSH RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|157911951|gb|ABV93384.1| alanyl-tRNA synthase [Dinoroseobacter shibae DFL 12]
Length = 887
Score = 546 bits (1406), Expect = e-152, Method: Compositional matrix adjust.
Identities = 300/679 (44%), Positives = 432/679 (63%), Gaps = 38/679 (5%)
Query: 51 DSIRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATS 109
+ IR FL+F+ GH+++ S+ LVP DPT++ T AGM+QFK +F G R RA TS
Sbjct: 5 NEIRSTFLNFFGGHGHEIVDSSPLVPRNDPTLMFTNAGMVQFKNVFTGLEHRDYNRATTS 64
Query: 110 QRCIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANR 165
Q+C+R ND++NVG T+RHHTFFEMLGNFSFGDYFK++AI +AW+ T EFG+ +R
Sbjct: 65 QKCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKEDAIPFAWDLITKEFGIDKSR 124
Query: 166 LWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDR- 224
L ++VY DDEA EIW K G+ + I R+ +DNFW G TGPCGPC+EI+YD H D
Sbjct: 125 LLVTVYHTDDEAAEIWKKHAGLSDDRIIRIPTNDNFWMMGPTGPCGPCTEIFYD-HGDHI 183
Query: 225 --GCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPN 282
G D RFIE +NLVFMQ+ + +DG+ EPL + +IDTG+GLERI +LQ +
Sbjct: 184 WGGPPGSPEEDGDRFIEIWNLVFMQFEQFEDGTREPLPKPSIDTGMGLERIGALLQGSHD 243
Query: 283 NYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGY 342
NY+TDL +I+ ++ +V D+ N++ ++I DHLR+ +L++DGV PSN GRGY
Sbjct: 244 NYDTDLFKTLIEASAHATSVD--PYGDK-NVHHRVIADHLRSTSFLIADGVMPSNEGRGY 300
Query: 343 VVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEE- 401
V+RR++RRA+R LLG + L A + + + EL R Q ++EE
Sbjct: 301 VLRRIMRRAMRHAHLLGAQDPVMYRLVPALVGQMGQAFPEL---------GRAQALIEET 351
Query: 402 LKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKE 461
L EE RF QTL+RG KLLD+ +AD E G++P G+ AF LYDT+GFP+++T++
Sbjct: 352 LMLEETRFRQTLDRGLKLLDEAVAD----VPEGGALP---GETAFKLYDTYGFPLDLTQD 404
Query: 462 VAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSA--DLAEKIPDTEFLGYDTLS 519
E G +V+ +GFD M +Q+ +++AA + D+S DLAE TEFLGYDT
Sbjct: 405 ALREKGRAVETEGFDAAMADQKAKARAAWAGSGETADESIWFDLAETHGATEFLGYDTEV 464
Query: 520 AKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVV 579
A+ V +L+ +G V ++++G ++LN+TPFYAESGGQ+GD G + G+
Sbjct: 465 AEGQVLALVKDGAQVAQLAEGETGWMVLNQTPFYAESGGQVGDSGGYLKSNGSGA----- 519
Query: 580 EVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVI 639
+ D +K G +F HK T + L+ G +E VDP R + +H+ATHLL AL++ +
Sbjct: 520 -IHDTQKRNG-LFAHKVTPKAQPLKAGDVLEMRVDPARRTAIRANHSATHLLHEALRQAL 577
Query: 640 GQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKR 699
G +Q GSL A DRLRFDF+ + L EL+++E +N +I + ++T++M D A+
Sbjct: 578 GAHVAQRGSLNAADRLRFDFSHSKALTLEELQKVEAEVNAYIRQNSPVETRIMTPDAARD 637
Query: 700 AGAIAMFGEKYGEQVKISS 718
GA A+FGEKYG++V++ S
Sbjct: 638 LGAQALFGEKYGDEVRVVS 656
>gi|413958429|ref|ZP_11397668.1| alanyl-tRNA ligase [Burkholderia sp. SJ98]
gi|413941009|gb|EKS72969.1| alanyl-tRNA ligase [Burkholderia sp. SJ98]
Length = 874
Score = 545 bits (1405), Expect = e-152, Method: Compositional matrix adjust.
Identities = 300/679 (44%), Positives = 415/679 (61%), Gaps = 44/679 (6%)
Query: 53 IRKRFLDFYASRGHKVLPSASLVP-EDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQR 111
IR++FL F+ S+GH ++ S+SLVP DPT+L T +GM+QFK +FLG R RA T+QR
Sbjct: 6 IREKFLKFFESKGHTIVRSSSLVPGNDPTLLFTNSGMVQFKDVFLGSESRPYSRATTAQR 65
Query: 112 CIRT----NDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLW 167
+R ND+ENVG T+RHHTFFEMLGNFSFGDYFK++AI + WE T + LPA +L
Sbjct: 66 SVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAIHYCWELLTKVYNLPAEKLT 125
Query: 168 ISVYEDDDEAFEIWNKEVGVPVEHIKRMG-------ADDNFWNSGATGPCGPCSEIYYDF 220
++VY++DDEAF+IW KE+GVPVE I R+G A DNFW TGPCGPCSE++YD
Sbjct: 126 VTVYQEDDEAFDIWAKEIGVPVERIIRIGDNKGARYASDNFWQMADTGPCGPCSEVFYDH 185
Query: 221 HPD--RGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQ 278
P+ G D RFIE +NLVFMQ+N+ G++ PL ++ +DTG+GLER+A +LQ
Sbjct: 186 GPEIWGGPPGSPEEDGDRFIEIWNLVFMQFNRDAQGNMTPLPKQCVDTGMGLERLAAVLQ 245
Query: 279 KVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNI 338
V +NYE DL +IK A+ N + D N +LK+I DH+RA +L+ DGV P N
Sbjct: 246 HVHSNYEIDLFQNLIKAAARETN-----TPDLENNSLKVIADHIRACSFLIVDGVIPGNE 300
Query: 339 GRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRI 398
GRGYV+RR++RRA+R G LG K GAF + + ++ +QR+
Sbjct: 301 GRGYVLRRIVRRAIRHGYKLGKK--------GAFFHKLVADLVAEMGAAYPELTDAQQRV 352
Query: 399 LEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEI 458
+ L++EE RF +T+E G +L+ LAD E V +L G+ AF L+DT+GFP+++
Sbjct: 353 TDVLRQEEERFFETIEHGMSILEGELADL-----EKKGVKQLDGELAFKLHDTYGFPLDL 407
Query: 459 TKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDT- 517
T +V E GV+VD FD M QR Q++AA KL +A L + F GY+
Sbjct: 408 TADVCRERGVTVDEPAFDDAMARQRDQARAA-GKFKL----AAGLEYSGAKSTFHGYEKE 462
Query: 518 LSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTA 577
+ A + +L V G V +V G V+L+ TPFYAESGGQ+GD G L +
Sbjct: 463 IFDDAKILALYVEGASVNEVKDGQQAVVVLDHTPFYAESGGQVGDQGVL------ANASV 516
Query: 578 VVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKK 637
V D K V H GT+ +G L+VG V+A +D R R +H+ATHL+ AL++
Sbjct: 517 RFAVADTLKVQADVVGHHGTVEQGTLKVGDVVKAEIDGVRRARTARNHSATHLMHKALRE 576
Query: 638 VIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDA 697
V+G Q GSLV D+ RFDF + P+ D E+ +E+++N I +VM DDA
Sbjct: 577 VLGGHVQQKGSLVDADKTRFDFAHNAPMSDEEIRRVEQIVNNEIIANAPGVVRVMPYDDA 636
Query: 698 KRAGAIAMFGEKYGEQVKI 716
+ GA+A+FGEKYG+ V++
Sbjct: 637 VKGGAMALFGEKYGDTVRV 655
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.137 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,310,076,735
Number of Sequences: 23463169
Number of extensions: 501273139
Number of successful extensions: 1360364
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 6544
Number of HSP's successfully gapped in prelim test: 798
Number of HSP's that attempted gapping in prelim test: 1306804
Number of HSP's gapped (non-prelim): 8604
length of query: 720
length of database: 8,064,228,071
effective HSP length: 150
effective length of query: 570
effective length of database: 8,839,720,017
effective search space: 5038640409690
effective search space used: 5038640409690
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 81 (35.8 bits)