Query 004998
Match_columns 720
No_of_seqs 751 out of 3614
Neff 7.9
Searched_HMMs 46136
Date Thu Mar 28 16:23:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004998.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/004998hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00181 protein SPA1-RELATED; 100.0 5.7E-70 1.2E-74 652.7 46.4 580 15-716 1-600 (793)
2 KOG0615 Serine/threonine prote 100.0 3E-43 6.5E-48 365.0 13.0 250 24-369 172-445 (475)
3 KOG0581 Mitogen-activated prot 100.0 1E-39 2.2E-44 336.9 13.0 208 66-369 126-343 (364)
4 KOG0588 Serine/threonine prote 100.0 1.3E-38 2.8E-43 346.6 15.1 234 40-372 34-274 (786)
5 KOG0591 NIMA (never in mitosis 100.0 7.4E-39 1.6E-43 317.4 11.4 204 66-367 67-282 (375)
6 KOG0575 Polo-like serine/threo 100.0 1.7E-38 3.7E-43 345.1 15.2 243 26-367 20-275 (592)
7 KOG0593 Predicted protein kina 100.0 1.4E-38 2.9E-43 318.4 12.1 215 58-366 40-289 (396)
8 KOG0598 Ribosomal protein S6 k 100.0 1.9E-38 4.1E-43 327.5 10.8 225 66-386 74-307 (357)
9 KOG0661 MAPK related serine/th 100.0 2.8E-38 6.1E-43 333.2 12.1 208 66-367 57-297 (538)
10 KOG0592 3-phosphoinositide-dep 100.0 8.5E-38 1.8E-42 334.2 14.6 216 66-367 122-344 (604)
11 KOG0198 MEKK and related serin 100.0 4.4E-37 9.4E-42 322.4 16.2 216 64-369 61-284 (313)
12 KOG0583 Serine/threonine prote 100.0 1.7E-36 3.6E-41 329.7 16.4 202 66-366 68-280 (370)
13 KOG0605 NDR and related serine 100.0 6E-37 1.3E-41 328.2 11.3 274 66-393 190-476 (550)
14 KOG0660 Mitogen-activated prot 100.0 4.6E-37 1E-41 316.1 9.9 226 60-374 64-323 (359)
15 KOG0578 p21-activated serine/t 100.0 2.8E-36 6E-41 325.5 15.7 228 41-367 297-529 (550)
16 KOG0600 Cdc2-related protein k 100.0 4.6E-36 1E-40 318.6 15.1 233 43-367 143-406 (560)
17 KOG0033 Ca2+/calmodulin-depend 100.0 8.6E-36 1.9E-40 290.2 14.9 208 63-367 56-273 (355)
18 KOG0616 cAMP-dependent protein 100.0 3.4E-36 7.3E-41 300.9 10.8 213 66-380 93-317 (355)
19 KOG0611 Predicted serine/threo 100.0 4.9E-36 1.1E-40 308.9 11.8 226 43-367 79-309 (668)
20 KOG0595 Serine/threonine-prote 100.0 6.4E-36 1.4E-40 311.1 12.6 213 65-368 57-275 (429)
21 KOG0610 Putative serine/threon 100.0 4.5E-35 9.7E-40 304.8 18.0 272 63-373 123-404 (459)
22 KOG0663 Protein kinase PITSLRE 100.0 2E-35 4.3E-40 299.4 13.3 235 40-369 99-369 (419)
23 KOG0659 Cdk activating kinase 100.0 2.7E-35 5.9E-40 290.5 13.3 234 41-369 26-289 (318)
24 KOG0192 Tyrosine kinase specif 100.0 1.2E-34 2.7E-39 312.5 16.1 207 61-360 83-298 (362)
25 KOG0585 Ca2+/calmodulin-depend 100.0 9.9E-35 2.1E-39 305.9 14.0 216 65-369 156-380 (576)
26 KOG0599 Phosphorylase kinase g 100.0 3.9E-35 8.5E-40 289.4 9.6 231 41-367 41-289 (411)
27 KOG1035 eIF-2alpha kinase GCN2 100.0 1.9E-34 4.1E-39 331.7 16.3 264 29-366 484-876 (1351)
28 KOG0594 Protein kinase PCTAIRE 100.0 6.7E-34 1.4E-38 293.8 15.1 239 43-372 37-313 (323)
29 KOG0577 Serine/threonine prote 100.0 2.1E-34 4.5E-39 308.5 11.5 231 40-369 49-286 (948)
30 KOG0582 Ste20-like serine/thre 100.0 4.1E-34 8.9E-39 299.7 13.4 234 43-369 52-301 (516)
31 KOG0597 Serine-threonine prote 100.0 2E-34 4.4E-39 307.9 10.3 206 66-369 50-259 (808)
32 KOG0032 Ca2+/calmodulin-depend 100.0 3.6E-33 7.8E-38 303.6 20.0 242 28-367 39-299 (382)
33 KOG0589 Serine/threonine prote 100.0 6E-34 1.3E-38 306.0 12.8 211 63-367 49-264 (426)
34 cd05612 STKc_PRKX_like Catalyt 100.0 7.1E-34 1.5E-38 301.4 12.6 203 64-367 48-260 (291)
35 KOG0694 Serine/threonine prote 100.0 3.1E-34 6.7E-39 315.1 10.0 220 75-393 427-657 (694)
36 PTZ00263 protein kinase A cata 100.0 1.1E-33 2.4E-38 305.4 13.7 203 64-367 65-277 (329)
37 cd05571 STKc_PKB Catalytic dom 100.0 1.8E-33 3.9E-38 303.0 14.7 207 63-367 41-257 (323)
38 cd05585 STKc_YPK1_like Catalyt 100.0 2.1E-33 4.5E-38 300.9 14.3 207 63-367 39-253 (312)
39 KOG0658 Glycogen synthase kina 100.0 3.5E-34 7.6E-39 295.3 7.2 214 66-370 66-315 (364)
40 cd07862 STKc_CDK6 Catalytic do 100.0 6.5E-33 1.4E-37 293.1 16.8 204 70-364 57-290 (290)
41 cd07859 STKc_TDY_MAPK_plant Ca 100.0 4.8E-33 1E-37 300.6 15.5 218 63-369 45-298 (338)
42 cd07869 STKc_PFTAIRE1 Catalyti 100.0 5.7E-33 1.2E-37 296.0 15.6 213 63-369 49-296 (303)
43 cd07871 STKc_PCTAIRE3 Catalyti 100.0 6.3E-33 1.4E-37 293.6 15.9 207 64-364 50-288 (288)
44 KOG0604 MAP kinase-activated p 100.0 5.3E-33 1.2E-37 277.9 13.7 202 74-367 112-328 (400)
45 PTZ00426 cAMP-dependent protei 100.0 6.4E-33 1.4E-37 301.0 15.5 202 65-367 79-290 (340)
46 cd05631 STKc_GRK4 Catalytic do 100.0 2.9E-33 6.2E-38 295.7 12.0 208 64-368 47-268 (285)
47 KOG0579 Ste20-like serine/thre 100.0 4.9E-33 1.1E-37 299.3 13.8 210 66-369 78-297 (1187)
48 KOG0580 Serine/threonine prote 100.0 2.2E-33 4.7E-38 273.5 9.4 243 24-367 22-279 (281)
49 KOG4721 Serine/threonine prote 100.0 9.1E-33 2E-37 294.9 14.7 243 13-365 121-368 (904)
50 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 7.9E-33 1.7E-37 299.1 14.5 204 65-367 49-263 (333)
51 cd07848 STKc_CDKL5 Catalytic d 100.0 1.5E-32 3.4E-37 289.7 16.1 206 65-364 48-287 (287)
52 cd05626 STKc_LATS2 Catalytic d 100.0 1.5E-32 3.3E-37 302.7 16.5 257 63-367 47-311 (381)
53 cd05593 STKc_PKB_gamma Catalyt 100.0 1.2E-32 2.6E-37 297.3 15.3 207 63-367 41-257 (328)
54 cd05573 STKc_ROCK_NDR_like Cat 100.0 9.5E-33 2.1E-37 300.1 13.9 235 65-367 49-291 (350)
55 cd07868 STKc_CDK8 Catalytic do 100.0 2.2E-32 4.8E-37 293.0 15.9 211 65-364 46-317 (317)
56 PTZ00283 serine/threonine prot 100.0 4.8E-32 1E-36 308.1 19.5 219 62-369 76-305 (496)
57 cd05595 STKc_PKB_beta Catalyti 100.0 1.5E-32 3.3E-37 295.9 14.2 204 65-367 43-257 (323)
58 cd05628 STKc_NDR1 Catalytic do 100.0 1.3E-32 2.9E-37 301.1 13.8 240 65-367 49-299 (363)
59 cd07876 STKc_JNK2 Catalytic do 100.0 3.2E-32 7E-37 297.5 16.5 212 63-369 66-323 (359)
60 KOG0596 Dual specificity; seri 100.0 1.6E-32 3.4E-37 293.7 13.5 229 43-367 386-633 (677)
61 cd05594 STKc_PKB_alpha Catalyt 100.0 2.4E-32 5.2E-37 294.4 15.0 208 63-367 41-258 (325)
62 cd05625 STKc_LATS1 Catalytic d 100.0 1.2E-32 2.6E-37 303.5 12.8 255 64-367 48-311 (382)
63 PHA03212 serine/threonine kina 100.0 2.8E-32 6.1E-37 301.3 15.6 212 65-370 131-385 (391)
64 cd05599 STKc_NDR_like Catalyti 100.0 2.9E-32 6.2E-37 298.3 14.9 244 65-367 49-302 (364)
65 KOG0197 Tyrosine kinases [Sign 100.0 4.1E-32 8.8E-37 292.8 15.7 232 30-359 212-455 (468)
66 cd05601 STKc_CRIK Catalytic do 100.0 2.6E-32 5.6E-37 294.6 14.0 209 64-367 48-269 (330)
67 cd05590 STKc_nPKC_eta Catalyti 100.0 1.3E-32 2.8E-37 295.9 11.6 204 66-367 44-259 (320)
68 cd07878 STKc_p38beta_MAPK11 Ca 100.0 2.5E-32 5.4E-37 296.3 13.8 210 64-369 61-306 (343)
69 cd05598 STKc_LATS Catalytic do 100.0 2.1E-32 4.6E-37 300.9 13.3 250 65-367 49-307 (376)
70 PTZ00267 NIMA-related protein 100.0 5.6E-32 1.2E-36 306.7 17.1 210 65-367 113-329 (478)
71 cd07875 STKc_JNK1 Catalytic do 100.0 6E-32 1.3E-36 295.9 16.7 212 63-369 69-326 (364)
72 cd07863 STKc_CDK4 Catalytic do 100.0 7.6E-32 1.6E-36 284.4 16.8 203 71-364 56-288 (288)
73 cd05629 STKc_NDR_like_fungal C 100.0 2.7E-32 5.8E-37 300.2 13.6 254 64-367 48-311 (377)
74 cd06649 PKc_MEK2 Catalytic dom 100.0 4.6E-32 1E-36 293.0 15.0 207 63-367 49-307 (331)
75 PHA03209 serine/threonine kina 100.0 5.6E-32 1.2E-36 295.6 15.6 206 66-366 106-356 (357)
76 PTZ00036 glycogen synthase kin 100.0 4.5E-32 9.7E-37 304.3 15.1 213 66-369 108-359 (440)
77 cd07874 STKc_JNK3 Catalytic do 100.0 3.4E-32 7.4E-37 296.8 13.8 213 63-369 62-319 (355)
78 cd05596 STKc_ROCK Catalytic do 100.0 4.7E-32 1E-36 297.6 14.0 206 66-367 92-310 (370)
79 cd05584 STKc_p70S6K Catalytic 100.0 1.3E-31 2.7E-36 288.6 16.3 206 65-367 48-262 (323)
80 cd05588 STKc_aPKC Catalytic do 100.0 6.5E-32 1.4E-36 291.7 14.0 205 66-367 44-268 (329)
81 cd05591 STKc_nPKC_epsilon Cata 100.0 7.3E-32 1.6E-36 290.1 14.4 204 66-367 44-260 (321)
82 cd05627 STKc_NDR2 Catalytic do 100.0 6.9E-32 1.5E-36 295.1 14.1 240 65-367 49-299 (360)
83 PHA02988 hypothetical protein; 100.0 1.2E-31 2.5E-36 283.5 15.3 203 63-360 64-274 (283)
84 cd05614 STKc_MSK2_N N-terminal 100.0 1.2E-31 2.6E-36 289.7 15.5 208 64-367 51-273 (332)
85 cd05620 STKc_nPKC_delta Cataly 100.0 1E-31 2.2E-36 288.5 14.6 204 66-367 44-254 (316)
86 KOG0201 Serine/threonine prote 100.0 4.3E-33 9.4E-38 292.0 3.5 207 64-367 58-269 (467)
87 cd05618 STKc_aPKC_iota Catalyt 100.0 1.2E-31 2.5E-36 289.8 14.4 206 66-367 44-268 (329)
88 cd05592 STKc_nPKC_theta_delta 100.0 1.3E-31 2.8E-36 287.7 14.6 203 67-367 45-254 (316)
89 cd05608 STKc_GRK1 Catalytic do 100.0 9.5E-32 2.1E-36 283.4 13.4 207 65-367 41-263 (280)
90 cd05586 STKc_Sck1_like Catalyt 100.0 1E-31 2.2E-36 290.1 13.8 205 67-367 43-259 (330)
91 cd05582 STKc_RSK_N N-terminal 100.0 1.4E-31 3E-36 287.6 14.6 207 63-367 44-260 (318)
92 cd07853 STKc_NLK Catalytic dom 100.0 1.7E-31 3.8E-36 293.2 15.7 214 63-367 45-294 (372)
93 KOG4717 Serine/threonine prote 100.0 9.8E-32 2.1E-36 284.1 13.0 205 66-369 66-278 (864)
94 cd05619 STKc_nPKC_theta Cataly 100.0 1.3E-31 2.8E-36 287.8 14.2 204 66-367 44-254 (316)
95 cd05102 PTKc_VEGFR3 Catalytic 100.0 1.8E-31 4E-36 288.9 15.6 206 64-360 57-329 (338)
96 cd05570 STKc_PKC Catalytic dom 100.0 1.2E-31 2.7E-36 288.1 13.9 204 66-367 44-258 (318)
97 cd05575 STKc_SGK Catalytic dom 100.0 2.7E-31 5.8E-36 286.0 16.4 201 70-367 49-257 (323)
98 KOG0667 Dual-specificity tyros 100.0 1E-31 2.2E-36 295.4 13.0 205 66-367 231-508 (586)
99 cd05621 STKc_ROCK2 Catalytic d 100.0 2.7E-31 5.9E-36 291.5 16.3 206 66-367 92-310 (370)
100 cd07867 STKc_CDC2L6 Catalytic 100.0 2.3E-31 4.9E-36 285.0 15.1 212 64-364 45-317 (317)
101 KOG4279 Serine/threonine prote 100.0 6.8E-32 1.5E-36 293.2 10.8 225 49-367 602-838 (1226)
102 KOG0584 Serine/threonine prote 100.0 9.1E-32 2E-36 293.1 11.3 209 62-367 86-302 (632)
103 cd05607 STKc_GRK7 Catalytic do 100.0 5.2E-31 1.1E-35 277.3 16.3 207 66-367 42-260 (277)
104 cd05589 STKc_PKN Catalytic dom 100.0 4.1E-31 9E-36 284.7 15.9 201 68-367 53-263 (324)
105 PHA03207 serine/threonine kina 100.0 3.1E-31 6.7E-36 293.4 15.1 210 65-367 134-381 (392)
106 cd06625 STKc_MEKK3_like Cataly 100.0 6.1E-31 1.3E-35 273.4 16.4 208 64-364 51-263 (263)
107 cd07839 STKc_CDK5 Catalytic do 100.0 4.5E-31 9.8E-36 277.9 15.1 207 64-364 46-284 (284)
108 cd07872 STKc_PCTAIRE2 Catalyti 100.0 5.7E-31 1.2E-35 281.4 16.0 210 64-367 51-292 (309)
109 cd06650 PKc_MEK1 Catalytic dom 100.0 3.4E-31 7.4E-36 286.6 14.4 207 63-367 49-305 (333)
110 cd05616 STKc_cPKC_beta Catalyt 100.0 3.4E-31 7.5E-36 285.1 14.2 205 66-367 49-263 (323)
111 KOG4645 MAPKKK (MAP kinase kin 100.0 4.5E-32 9.7E-37 313.5 7.6 237 40-369 1258-1502(1509)
112 cd05604 STKc_SGK3 Catalytic do 100.0 6.3E-31 1.4E-35 283.4 15.8 202 69-367 48-257 (325)
113 cd05597 STKc_DMPK_like Catalyt 100.0 4.6E-31 9.9E-36 285.3 14.6 208 66-367 50-272 (331)
114 cd05605 STKc_GRK4_like Catalyt 100.0 4.8E-31 1.1E-35 278.7 14.5 206 65-367 48-267 (285)
115 cd05587 STKc_cPKC Catalytic do 100.0 4.5E-31 9.8E-36 284.3 14.4 205 65-367 48-263 (324)
116 cd05617 STKc_aPKC_zeta Catalyt 100.0 3.6E-31 7.9E-36 285.6 13.7 206 66-368 44-267 (327)
117 PTZ00284 protein kinase; Provi 100.0 4.8E-31 1E-35 298.6 14.8 220 67-368 175-445 (467)
118 PHA03211 serine/threonine kina 100.0 6.4E-31 1.4E-35 295.0 15.6 209 66-366 209-460 (461)
119 cd05602 STKc_SGK1 Catalytic do 100.0 1.2E-30 2.6E-35 281.2 16.1 201 69-367 48-257 (325)
120 cd05603 STKc_SGK2 Catalytic do 100.0 1.4E-30 3.1E-35 280.0 16.7 202 69-367 48-257 (321)
121 PLN00034 mitogen-activated pro 100.0 6.1E-31 1.3E-35 286.8 14.0 206 65-369 120-336 (353)
122 KOG0666 Cyclin C-dependent kin 100.0 1.7E-31 3.7E-36 268.1 8.7 216 65-370 75-346 (438)
123 cd08227 PK_STRAD_alpha Pseudok 100.0 1.5E-30 3.2E-35 280.6 16.0 214 66-367 48-313 (327)
124 PTZ00266 NIMA-related protein 100.0 6.7E-31 1.4E-35 309.2 13.9 226 64-366 59-300 (1021)
125 cd05622 STKc_ROCK1 Catalytic d 100.0 1.9E-30 4.1E-35 285.0 16.4 206 66-367 92-310 (371)
126 cd06643 STKc_SLK Catalytic dom 100.0 3.7E-30 8.1E-35 271.0 17.6 209 65-367 50-268 (282)
127 cd05624 STKc_MRCK_beta Catalyt 100.0 1.1E-30 2.5E-35 282.2 13.8 208 66-367 50-272 (331)
128 cd05574 STKc_phototropin_like 100.0 2.1E-30 4.6E-35 277.6 15.8 242 63-369 47-297 (316)
129 cd05623 STKc_MRCK_alpha Cataly 100.0 2.8E-30 6E-35 279.2 16.7 208 66-367 50-272 (332)
130 cd05630 STKc_GRK6 Catalytic do 100.0 1.2E-30 2.7E-35 275.7 13.7 206 66-367 49-267 (285)
131 cd06631 STKc_YSK4 Catalytic do 100.0 2.7E-30 5.9E-35 269.2 16.0 212 64-364 49-265 (265)
132 cd07873 STKc_PCTAIRE1 Catalyti 100.0 2.9E-30 6.4E-35 274.7 16.2 211 64-368 51-293 (301)
133 cd06628 STKc_MAPKKK_Byr2_like 100.0 4.1E-30 9E-35 267.9 16.6 210 64-364 53-267 (267)
134 cd08529 STKc_FA2-like Catalyti 100.0 4.9E-30 1.1E-34 265.3 16.9 206 64-364 46-256 (256)
135 cd08223 STKc_Nek4 Catalytic do 100.0 3.4E-30 7.3E-35 266.8 15.7 207 64-364 46-257 (257)
136 cd07861 STKc_CDK1_euk Catalyti 100.0 2.8E-30 6E-35 271.9 14.7 205 66-364 48-285 (285)
137 cd06651 STKc_MEKK3 Catalytic d 100.0 5.6E-30 1.2E-34 267.3 16.2 211 63-365 50-265 (266)
138 KOG0612 Rho-associated, coiled 100.0 3.9E-31 8.4E-36 302.3 7.8 236 58-393 118-369 (1317)
139 cd07865 STKc_CDK9 Catalytic do 100.0 6.7E-30 1.4E-34 272.1 16.8 212 65-364 59-310 (310)
140 cd05064 PTKc_EphR_A10 Catalyti 100.0 4.1E-30 8.8E-35 268.6 14.8 203 63-360 52-260 (266)
141 cd06644 STKc_STK10_LOK Catalyt 100.0 1.4E-29 3.1E-34 268.1 18.7 210 66-370 58-278 (292)
142 cd06637 STKc_TNIK Catalytic do 100.0 7.3E-30 1.6E-34 266.8 16.2 209 65-364 50-272 (272)
143 cd06611 STKc_SLK_like Catalyti 100.0 8.4E-30 1.8E-34 267.9 16.7 208 65-367 50-268 (280)
144 cd06645 STKc_MAP4K3 Catalytic 100.0 6.9E-30 1.5E-34 266.5 15.9 204 65-363 54-267 (267)
145 cd05572 STKc_cGK_PKG Catalytic 100.0 4.8E-30 1E-34 266.9 14.5 208 64-367 40-258 (262)
146 cd07855 STKc_ERK5 Catalytic do 100.0 3.2E-30 6.9E-35 278.9 13.6 222 64-372 51-305 (334)
147 PHA03210 serine/threonine kina 100.0 4.6E-30 1E-34 292.4 14.9 210 65-367 211-460 (501)
148 cd06612 STKc_MST1_2 Catalytic 100.0 9.5E-30 2.1E-34 263.1 15.6 204 66-364 47-256 (256)
149 cd07831 STKc_MOK Catalytic dom 100.0 1.4E-29 3.1E-34 265.8 17.2 204 66-364 46-282 (282)
150 cd05615 STKc_cPKC_alpha Cataly 100.0 4.9E-30 1.1E-34 276.3 13.8 205 66-367 49-263 (323)
151 cd05632 STKc_GRK5 Catalytic do 100.0 7.4E-30 1.6E-34 269.7 14.9 207 65-367 48-267 (285)
152 cd06654 STKc_PAK1 Catalytic do 100.0 1E-29 2.2E-34 270.2 15.8 208 66-369 66-278 (296)
153 cd08217 STKc_Nek2 Catalytic do 100.0 8.9E-30 1.9E-34 264.0 15.0 209 63-364 45-265 (265)
154 KOG0986 G protein-coupled rece 100.0 2.5E-30 5.5E-35 271.0 10.7 208 66-369 234-454 (591)
155 cd07845 STKc_CDK10 Catalytic d 100.0 1.6E-29 3.5E-34 270.1 17.2 214 65-370 54-299 (309)
156 cd08220 STKc_Nek8 Catalytic do 100.0 1.2E-29 2.5E-34 262.4 15.5 206 63-364 45-256 (256)
157 cd07850 STKc_JNK Catalytic dom 100.0 8.5E-30 1.8E-34 277.8 15.1 210 65-369 63-319 (353)
158 cd07832 STKc_CCRK Catalytic do 100.0 1.4E-29 3.1E-34 266.4 16.2 209 64-365 46-286 (286)
159 KOG0607 MAP kinase-interacting 100.0 2.5E-30 5.4E-35 260.4 9.7 218 62-367 120-367 (463)
160 cd07860 STKc_CDK2_3 Catalytic 100.0 1.5E-29 3.3E-34 266.3 16.2 208 63-364 45-284 (284)
161 cd05104 PTKc_Kit Catalytic dom 100.0 9.1E-30 2E-34 280.0 15.0 204 65-360 86-369 (375)
162 cd06619 PKc_MKK5 Catalytic dom 100.0 1.5E-29 3.3E-34 266.2 15.9 206 66-372 48-264 (279)
163 cd06624 STKc_ASK Catalytic dom 100.0 1.3E-29 2.8E-34 264.8 15.1 207 64-364 52-268 (268)
164 cd05048 PTKc_Ror Catalytic Dom 100.0 1.5E-29 3.2E-34 266.2 15.7 203 65-360 56-278 (283)
165 cd06639 STKc_myosinIIIB Cataly 100.0 2.2E-29 4.8E-34 266.4 16.8 209 66-365 67-291 (291)
166 KOG1989 ARK protein kinase fam 100.0 1.9E-30 4.2E-35 293.8 9.2 209 66-360 83-306 (738)
167 cd06633 STKc_TAO3 Catalytic do 100.0 5.9E-29 1.3E-33 266.6 20.4 206 64-368 68-280 (313)
168 cd06615 PKc_MEK Catalytic doma 100.0 1.1E-29 2.4E-34 271.5 14.6 205 65-367 47-293 (308)
169 KOG0603 Ribosomal protein S6 k 100.0 5.6E-30 1.2E-34 280.4 12.3 193 69-364 368-566 (612)
170 cd05633 STKc_GRK3 Catalytic do 100.0 1.3E-29 2.8E-34 267.1 14.8 201 70-368 50-262 (279)
171 cd06652 STKc_MEKK2 Catalytic d 100.0 2.3E-29 5E-34 262.4 16.4 211 63-365 50-265 (265)
172 cd06632 STKc_MEKK1_plant Catal 100.0 2E-29 4.3E-34 260.8 15.7 206 63-364 48-258 (258)
173 PF00069 Pkinase: Protein kina 100.0 3.1E-30 6.7E-35 267.2 9.6 204 66-364 47-260 (260)
174 cd06655 STKc_PAK2 Catalytic do 100.0 1.9E-29 4.1E-34 268.2 15.9 208 65-368 64-276 (296)
175 cd06636 STKc_MAP4K4_6 Catalyti 100.0 1.5E-29 3.3E-34 266.2 14.9 210 64-364 59-282 (282)
176 cd08221 STKc_Nek9 Catalytic do 100.0 2.4E-29 5.3E-34 260.4 16.2 207 63-364 45-256 (256)
177 cd07844 STKc_PCTAIRE_like Cata 100.0 1.7E-29 3.7E-34 267.0 15.3 206 65-364 51-291 (291)
178 cd06605 PKc_MAPKK Catalytic do 100.0 7.9E-30 1.7E-34 265.3 12.4 207 65-367 47-263 (265)
179 cd06609 STKc_MST3_like Catalyt 100.0 1.8E-29 3.9E-34 264.5 15.0 207 65-369 47-259 (274)
180 cd06638 STKc_myosinIIIA Cataly 100.0 2.7E-29 5.9E-34 264.6 16.3 208 66-364 63-286 (286)
181 KOG0662 Cyclin-dependent kinas 100.0 7.2E-30 1.6E-34 238.2 10.4 209 65-367 49-289 (292)
182 cd05084 PTKc_Fes Catalytic dom 100.0 2.2E-29 4.7E-34 260.4 15.2 203 64-360 40-248 (252)
183 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 4.9E-29 1.1E-33 263.5 18.2 212 64-370 46-275 (287)
184 cd06630 STKc_MEKK1 Catalytic d 100.0 2.7E-29 5.9E-34 261.7 16.0 212 63-365 49-268 (268)
185 cd05580 STKc_PKA Catalytic dom 100.0 3E-29 6.5E-34 265.5 16.5 204 63-367 47-260 (290)
186 KOG0586 Serine/threonine prote 100.0 9E-30 2E-34 277.4 12.7 208 65-370 103-315 (596)
187 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 2.2E-29 4.7E-34 265.6 15.2 211 64-370 46-271 (286)
188 cd06656 STKc_PAK3 Catalytic do 100.0 1.3E-29 2.8E-34 269.6 13.5 209 65-369 64-277 (297)
189 cd08216 PK_STRAD Pseudokinase 100.0 2.7E-29 5.8E-34 268.7 16.0 220 62-368 44-302 (314)
190 cd07866 STKc_BUR1 Catalytic do 100.0 4E-29 8.8E-34 266.2 17.2 221 65-364 55-311 (311)
191 cd05106 PTKc_CSF-1R Catalytic 100.0 1.5E-29 3.3E-34 278.1 14.4 203 65-360 89-367 (374)
192 cd06607 STKc_TAO Catalytic dom 100.0 4.3E-29 9.4E-34 266.6 17.4 205 65-368 63-274 (307)
193 cd06613 STKc_MAP4K3_like Catal 100.0 3.2E-29 6.9E-34 260.1 15.8 203 66-363 49-262 (262)
194 cd06659 STKc_PAK6 Catalytic do 100.0 2.8E-29 6E-34 267.1 15.1 208 65-369 66-279 (297)
195 PHA03390 pk1 serine/threonine- 100.0 3.8E-29 8.2E-34 261.8 15.7 193 75-366 67-267 (267)
196 cd05609 STKc_MAST Catalytic do 100.0 5.5E-29 1.2E-33 265.5 17.2 221 66-367 50-279 (305)
197 cd06658 STKc_PAK5 Catalytic do 100.0 2.4E-29 5.2E-34 266.9 14.4 208 65-370 67-281 (292)
198 cd06648 STKc_PAK_II Catalytic 100.0 5.1E-29 1.1E-33 263.3 16.8 207 65-369 64-277 (285)
199 cd06634 STKc_TAO2 Catalytic do 100.0 8.2E-29 1.8E-33 264.8 18.3 207 64-369 62-275 (308)
200 cd05113 PTKc_Btk_Bmx Catalytic 100.0 5.1E-29 1.1E-33 258.9 16.1 203 65-361 47-254 (256)
201 KOG1187 Serine/threonine prote 100.0 2.8E-29 6E-34 272.5 14.6 242 22-360 73-347 (361)
202 cd05115 PTKc_Zap-70 Catalytic 100.0 6.8E-29 1.5E-33 258.2 16.8 204 64-360 42-250 (257)
203 cd06635 STKc_TAO1 Catalytic do 100.0 1.7E-28 3.7E-33 263.4 20.4 205 64-367 72-283 (317)
204 KOG0669 Cyclin T-dependent kin 100.0 1.5E-29 3.2E-34 247.5 10.9 222 63-370 62-324 (376)
205 cd06608 STKc_myosinIII_like Ca 100.0 3.4E-29 7.3E-34 261.4 14.4 208 65-364 50-275 (275)
206 KOG2345 Serine/threonine prote 100.0 3.2E-30 6.9E-35 252.4 6.1 250 27-360 24-295 (302)
207 cd07842 STKc_CDK8_like Catalyt 100.0 4.7E-29 1E-33 266.6 15.6 211 65-364 50-316 (316)
208 cd05096 PTKc_DDR1 Catalytic do 100.0 5.3E-29 1.1E-33 265.4 15.9 203 65-360 67-300 (304)
209 KOG0983 Mitogen-activated prot 100.0 8.6E-30 1.9E-34 251.9 9.0 201 71-367 145-355 (391)
210 cd08218 STKc_Nek1 Catalytic do 100.0 6E-29 1.3E-33 257.5 15.7 206 64-364 46-256 (256)
211 cd05578 STKc_Yank1 Catalytic d 100.0 3.9E-29 8.5E-34 259.4 14.3 204 63-364 46-258 (258)
212 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 5E-29 1.1E-33 260.1 15.2 196 65-361 52-260 (262)
213 cd08226 PK_STRAD_beta Pseudoki 100.0 2.3E-29 4.9E-34 271.5 12.8 218 63-367 45-314 (328)
214 cd05114 PTKc_Tec_Rlk Catalytic 100.0 9.5E-29 2.1E-33 256.4 16.9 201 66-360 48-253 (256)
215 cd06629 STKc_MAPKKK_Bck1_like 100.0 9.1E-29 2E-33 258.7 16.8 206 66-364 57-272 (272)
216 cd05082 PTKc_Csk Catalytic dom 100.0 4.6E-29 1E-33 258.7 14.4 198 65-360 47-251 (256)
217 KOG4236 Serine/threonine prote 100.0 1.8E-29 3.9E-34 267.6 11.4 215 66-375 612-833 (888)
218 cd05093 PTKc_TrkB Catalytic do 100.0 5.6E-29 1.2E-33 263.2 15.2 203 65-360 55-274 (288)
219 cd05088 PTKc_Tie2 Catalytic do 100.0 3.7E-29 8E-34 266.8 13.9 201 65-361 55-276 (303)
220 cd05054 PTKc_VEGFR Catalytic d 100.0 5.5E-29 1.2E-33 269.8 15.5 204 66-360 59-328 (337)
221 cd08219 STKc_Nek3 Catalytic do 100.0 6.1E-29 1.3E-33 257.5 15.2 203 64-361 45-252 (255)
222 cd05116 PTKc_Syk Catalytic dom 100.0 7.3E-29 1.6E-33 257.5 15.8 201 66-360 45-250 (257)
223 cd07843 STKc_CDC2L1 Catalytic 100.0 8E-29 1.7E-33 262.3 16.4 208 65-364 52-293 (293)
224 cd07851 STKc_p38 Catalytic dom 100.0 3.7E-29 7.9E-34 271.7 14.1 209 66-370 63-307 (343)
225 KOG0665 Jun-N-terminal kinase 100.0 7.4E-30 1.6E-34 258.1 7.9 213 59-365 57-314 (369)
226 cd07849 STKc_ERK1_2_like Catal 100.0 5.9E-29 1.3E-33 269.2 15.4 219 63-370 49-301 (336)
227 cd05111 PTK_HER3 Pseudokinase 100.0 1.2E-28 2.6E-33 259.5 17.3 203 64-360 56-263 (279)
228 cd07858 STKc_TEY_MAPK_plant Ca 100.0 3.6E-29 7.8E-34 271.1 13.6 218 63-371 50-301 (337)
229 cd05094 PTKc_TrkC Catalytic do 100.0 9.7E-29 2.1E-33 261.7 16.6 202 66-360 56-277 (291)
230 cd05089 PTKc_Tie1 Catalytic do 100.0 7.9E-29 1.7E-33 263.3 15.9 201 64-360 49-270 (297)
231 cd06617 PKc_MKK3_6 Catalytic d 100.0 6.2E-29 1.3E-33 261.3 15.0 204 70-368 53-268 (283)
232 cd07877 STKc_p38alpha_MAPK14 C 100.0 3.2E-29 6.9E-34 272.5 13.2 211 64-370 63-309 (345)
233 cd07837 STKc_CdkB_plant Cataly 100.0 8.9E-29 1.9E-33 261.9 16.2 211 65-365 48-295 (295)
234 cd05576 STKc_RPK118_like Catal 100.0 3.6E-29 7.8E-34 257.2 12.7 195 69-364 37-237 (237)
235 cd07870 STKc_PFTAIRE2 Catalyti 100.0 1E-28 2.2E-33 261.3 16.5 207 64-364 50-291 (291)
236 cd05577 STKc_GRK Catalytic dom 100.0 8.1E-29 1.7E-33 260.3 15.4 206 66-367 42-260 (277)
237 cd05108 PTKc_EGFR Catalytic do 100.0 7.3E-29 1.6E-33 266.1 15.3 203 64-360 56-263 (316)
238 cd05611 STKc_Rim15_like Cataly 100.0 1.1E-28 2.3E-33 256.4 16.0 198 70-367 50-257 (260)
239 cd07847 STKc_CDKL1_4 Catalytic 100.0 1.2E-28 2.5E-33 259.5 16.4 205 65-364 48-286 (286)
240 cd05059 PTKc_Tec_like Catalyti 100.0 1E-28 2.3E-33 256.2 15.9 201 66-360 48-253 (256)
241 cd08228 STKc_Nek6 Catalytic do 100.0 7.3E-29 1.6E-33 258.5 14.7 204 63-360 48-260 (267)
242 cd07880 STKc_p38gamma_MAPK12 C 100.0 4.7E-29 1E-33 270.9 13.7 211 64-370 61-307 (343)
243 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 9.3E-29 2E-33 257.1 15.3 201 66-360 48-255 (258)
244 cd06640 STKc_MST4 Catalytic do 100.0 7.9E-29 1.7E-33 260.4 14.9 207 63-367 48-259 (277)
245 cd05052 PTKc_Abl Catalytic dom 100.0 1.4E-28 3.1E-33 256.3 16.5 200 66-360 51-257 (263)
246 cd05579 STKc_MAST_like Catalyt 100.0 7.9E-29 1.7E-33 256.9 14.5 217 63-367 39-263 (265)
247 cd07879 STKc_p38delta_MAPK13 C 100.0 7.7E-29 1.7E-33 269.1 15.1 209 65-370 62-306 (342)
248 cd06642 STKc_STK25-YSK1 Cataly 100.0 4.5E-29 9.7E-34 262.1 12.8 207 63-367 48-259 (277)
249 cd07841 STKc_CDK7 Catalytic do 100.0 1E-28 2.3E-33 262.0 15.7 209 66-369 51-290 (298)
250 cd05049 PTKc_Trk Catalytic dom 100.0 1.3E-28 2.7E-33 258.6 16.2 203 65-360 56-276 (280)
251 cd06646 STKc_MAP4K5 Catalytic 100.0 6.6E-29 1.4E-33 259.1 13.9 202 66-363 55-267 (267)
252 cd05090 PTKc_Ror1 Catalytic do 100.0 1.3E-28 2.8E-33 259.4 16.3 205 64-361 54-279 (283)
253 cd05606 STKc_beta_ARK Catalyti 100.0 1E-28 2.2E-33 260.1 15.4 202 69-368 49-262 (278)
254 cd07857 STKc_MPK1 Catalytic do 100.0 1E-28 2.2E-33 266.9 15.8 218 65-369 49-300 (332)
255 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 1.8E-28 4E-33 258.5 17.4 209 63-360 52-278 (284)
256 cd06626 STKc_MEKK4 Catalytic d 100.0 1.8E-28 4E-33 254.6 17.0 210 63-364 45-264 (264)
257 cd05058 PTKc_Met_Ron Catalytic 100.0 1.5E-28 3.2E-33 255.5 16.2 204 66-360 45-254 (262)
258 KOG0574 STE20-like serine/thre 100.0 4.9E-30 1.1E-34 256.0 4.8 207 66-368 77-290 (502)
259 cd05053 PTKc_FGFR Catalytic do 100.0 1.5E-28 3.2E-33 260.1 16.5 205 64-361 62-287 (293)
260 cd05062 PTKc_IGF-1R Catalytic 100.0 1.2E-28 2.6E-33 258.9 15.6 204 65-361 57-274 (277)
261 cd08225 STKc_Nek5 Catalytic do 100.0 1E-28 2.2E-33 255.5 14.7 205 65-364 47-257 (257)
262 cd06616 PKc_MKK4 Catalytic dom 100.0 8.8E-29 1.9E-33 261.2 14.3 209 64-367 49-273 (288)
263 KOG0690 Serine/threonine prote 100.0 8.9E-30 1.9E-34 256.7 6.3 221 66-385 217-449 (516)
264 cd00192 PTKc Catalytic domain 100.0 2E-28 4.2E-33 253.2 16.5 204 65-361 44-260 (262)
265 cd07834 STKc_MAPK Catalytic do 100.0 8.7E-29 1.9E-33 266.8 14.1 218 64-370 46-298 (330)
266 PTZ00024 cyclin-dependent prot 100.0 2.5E-28 5.4E-33 264.0 17.4 225 64-370 67-322 (335)
267 KOG0608 Warts/lats-like serine 100.0 2.4E-29 5.1E-34 271.5 9.1 248 66-369 678-936 (1034)
268 cd06610 STKc_OSR1_SPAK Catalyt 100.0 1.8E-28 4E-33 254.9 15.5 208 65-364 47-267 (267)
269 cd06606 STKc_MAPKKK Catalytic 100.0 2.2E-28 4.9E-33 251.9 16.0 210 64-364 46-260 (260)
270 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 1.3E-28 2.8E-33 259.6 14.6 207 64-367 50-272 (284)
271 cd05075 PTKc_Axl Catalytic dom 100.0 2.2E-28 4.8E-33 255.6 16.1 206 66-360 49-266 (272)
272 cd05061 PTKc_InsR Catalytic do 100.0 2.4E-28 5.2E-33 258.3 16.4 210 65-367 57-286 (288)
273 cd05091 PTKc_Ror2 Catalytic do 100.0 2.1E-28 4.7E-33 257.6 15.9 203 64-360 55-278 (283)
274 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 2.4E-28 5.2E-33 256.7 16.2 194 66-361 65-272 (274)
275 cd05040 PTKc_Ack_like Catalyti 100.0 2.6E-28 5.7E-33 252.9 16.1 205 63-360 42-253 (257)
276 cd07854 STKc_MAPK4_6 Catalytic 100.0 7.7E-29 1.7E-33 269.1 12.6 215 66-369 51-308 (342)
277 cd06623 PKc_MAPKK_plant_like C 100.0 1.9E-28 4E-33 254.4 14.9 209 64-367 46-262 (264)
278 cd05033 PTKc_EphR Catalytic do 100.0 3.2E-28 7E-33 253.8 16.7 203 65-360 53-260 (266)
279 cd05109 PTKc_HER2 Catalytic do 100.0 2.6E-28 5.6E-33 256.6 15.9 203 64-360 56-263 (279)
280 cd05036 PTKc_ALK_LTK Catalytic 100.0 2.4E-28 5.2E-33 256.7 15.7 202 66-361 58-274 (277)
281 cd06917 STKc_NAK1_like Catalyt 100.0 1.8E-28 4E-33 257.1 14.5 208 63-368 45-262 (277)
282 cd06653 STKc_MEKK3_like_1 Cata 100.0 3.7E-28 8.1E-33 253.3 16.6 210 63-364 50-264 (264)
283 cd07836 STKc_Pho85 Catalytic d 100.0 2.4E-28 5.2E-33 257.0 15.2 205 66-364 47-284 (284)
284 cd08229 STKc_Nek7 Catalytic do 100.0 1.6E-28 3.6E-33 255.8 13.8 203 64-360 49-260 (267)
285 cd05122 PKc_STE Catalytic doma 100.0 3.9E-28 8.4E-33 249.1 16.3 204 64-363 44-253 (253)
286 cd05085 PTKc_Fer Catalytic dom 100.0 4.3E-28 9.4E-33 250.2 16.7 204 63-360 38-246 (250)
287 cd05610 STKc_MASTL Catalytic d 100.0 1.8E-28 3.9E-33 288.1 15.6 103 63-170 50-153 (669)
288 cd05060 PTKc_Syk_like Catalyti 100.0 3.9E-28 8.4E-33 251.9 16.2 202 65-360 44-250 (257)
289 cd07835 STKc_CDK1_like Catalyt 100.0 3.4E-28 7.4E-33 255.9 16.0 205 66-364 47-283 (283)
290 cd05072 PTKc_Lyn Catalytic dom 100.0 3.8E-28 8.3E-33 252.4 16.0 200 66-360 50-256 (261)
291 cd08215 STKc_Nek Catalytic dom 100.0 3.3E-28 7.2E-33 250.9 15.2 204 65-364 47-258 (258)
292 KOG0671 LAMMER dual specificit 100.0 1.9E-28 4.1E-33 253.3 13.2 224 66-368 134-413 (415)
293 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 3.2E-28 7E-33 252.1 15.0 196 63-360 47-256 (259)
294 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 4.1E-28 8.9E-33 255.6 16.1 203 66-360 55-276 (283)
295 cd05055 PTKc_PDGFR Catalytic d 100.0 4.3E-28 9.4E-33 258.6 16.4 204 65-360 86-296 (302)
296 cd07833 STKc_CDKL Catalytic do 100.0 4.1E-28 8.9E-33 255.5 16.1 207 64-364 47-288 (288)
297 cd06614 STKc_PAK Catalytic dom 100.0 3.6E-28 7.8E-33 256.4 15.6 208 65-367 63-276 (286)
298 cd05068 PTKc_Frk_like Catalyti 100.0 4.9E-28 1.1E-32 251.7 16.4 201 66-360 50-256 (261)
299 cd05066 PTKc_EphR_A Catalytic 100.0 4.4E-28 9.6E-33 253.1 16.1 205 64-360 52-261 (267)
300 cd07852 STKc_MAPK15 Catalytic 100.0 2.9E-28 6.3E-33 263.8 15.2 216 65-369 54-303 (337)
301 cd05051 PTKc_DDR Catalytic dom 100.0 4E-28 8.7E-33 257.0 15.7 202 66-360 68-292 (296)
302 cd05105 PTKc_PDGFR_alpha Catal 100.0 3.3E-28 7.1E-33 269.4 15.6 203 65-360 88-392 (400)
303 cd05092 PTKc_TrkA Catalytic do 100.0 4.4E-28 9.6E-33 255.2 15.8 202 66-360 56-276 (280)
304 cd07846 STKc_CDKL2_3 Catalytic 100.0 1.9E-28 4.1E-33 258.1 13.0 204 66-364 49-286 (286)
305 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 4.9E-28 1.1E-32 251.9 16.0 204 63-360 48-260 (267)
306 cd05032 PTKc_InsR_like Catalyt 100.0 6E-28 1.3E-32 253.0 16.7 202 66-360 58-273 (277)
307 cd05118 STKc_CMGC Catalytic do 100.0 2.9E-28 6.2E-33 255.9 14.2 208 63-364 44-283 (283)
308 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 5.5E-28 1.2E-32 251.3 16.1 201 65-360 49-255 (260)
309 cd08222 STKc_Nek11 Catalytic d 100.0 4.4E-28 9.6E-33 251.8 15.3 205 63-364 48-260 (260)
310 cd05083 PTKc_Chk Catalytic dom 100.0 5.7E-28 1.2E-32 250.2 15.8 196 66-360 48-249 (254)
311 cd05056 PTKc_FAK Catalytic dom 100.0 6.3E-28 1.4E-32 252.2 16.1 202 64-360 54-260 (270)
312 cd05063 PTKc_EphR_A2 Catalytic 100.0 7.6E-28 1.6E-32 251.2 16.7 204 65-360 54-262 (268)
313 cd06641 STKc_MST3 Catalytic do 100.0 3.3E-28 7.2E-33 255.6 13.9 205 65-367 50-259 (277)
314 cd05101 PTKc_FGFR2 Catalytic d 100.0 6.5E-28 1.4E-32 257.1 16.3 205 63-360 66-291 (304)
315 cd07838 STKc_CDK4_6_like Catal 100.0 7.6E-28 1.6E-32 253.2 16.5 203 71-364 55-287 (287)
316 cd05050 PTKc_Musk Catalytic do 100.0 5E-28 1.1E-32 255.6 15.2 204 64-360 55-284 (288)
317 PLN00009 cyclin-dependent kina 100.0 5.7E-28 1.2E-32 255.9 15.7 209 66-368 50-291 (294)
318 KOG0614 cGMP-dependent protein 100.0 1.4E-29 3E-34 268.0 3.2 224 66-386 469-703 (732)
319 cd06647 STKc_PAK_I Catalytic d 100.0 3.6E-28 7.9E-33 257.9 14.1 207 65-368 64-276 (293)
320 cd06618 PKc_MKK7 Catalytic dom 100.0 5.9E-28 1.3E-32 256.4 15.7 209 66-369 62-281 (296)
321 cd05035 PTKc_Axl_like Catalyti 100.0 7.6E-28 1.6E-32 251.3 16.3 207 65-360 49-267 (273)
322 cd07864 STKc_CDK12 Catalytic d 100.0 8.2E-28 1.8E-32 255.4 16.8 210 65-364 54-302 (302)
323 cd05047 PTKc_Tie Catalytic dom 100.0 6E-28 1.3E-32 252.7 15.5 200 65-360 43-263 (270)
324 cd05069 PTKc_Yes Catalytic dom 100.0 8E-28 1.7E-32 250.2 16.2 201 65-360 49-255 (260)
325 cd05041 PTKc_Fes_like Catalyti 100.0 8.8E-28 1.9E-32 248.0 16.3 203 65-360 40-247 (251)
326 cd05071 PTKc_Src Catalytic dom 100.0 9.3E-28 2E-32 250.2 16.4 201 65-360 49-255 (262)
327 cd05099 PTKc_FGFR4 Catalytic d 100.0 1E-27 2.2E-32 257.0 17.0 203 65-360 65-288 (314)
328 cd05103 PTKc_VEGFR2 Catalytic 100.0 6.4E-28 1.4E-32 262.1 15.4 206 65-361 58-335 (343)
329 cd05098 PTKc_FGFR1 Catalytic d 100.0 6.8E-28 1.5E-32 257.4 15.2 204 64-360 70-294 (307)
330 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 9.2E-28 2E-32 252.9 16.0 208 64-360 52-278 (284)
331 cd08530 STKc_CNK2-like Catalyt 100.0 8.7E-28 1.9E-32 248.2 15.5 205 63-364 45-256 (256)
332 cd05148 PTKc_Srm_Brk Catalytic 100.0 1E-27 2.2E-32 249.0 16.1 201 65-360 50-256 (261)
333 cd05112 PTKc_Itk Catalytic dom 100.0 9.4E-28 2E-32 248.5 15.5 202 65-360 47-253 (256)
334 cd06657 STKc_PAK4 Catalytic do 100.0 9.4E-28 2E-32 254.8 15.4 208 64-369 64-278 (292)
335 PRK13184 pknD serine/threonine 100.0 3.5E-28 7.6E-33 285.3 13.2 220 63-360 48-284 (932)
336 cd07830 STKc_MAK_like Catalyti 99.9 1.5E-27 3.2E-32 250.8 16.6 206 64-364 44-283 (283)
337 cd05045 PTKc_RET Catalytic dom 99.9 1.2E-27 2.5E-32 253.2 15.8 204 64-360 50-281 (290)
338 cd07840 STKc_CDK9_like Catalyt 99.9 1.2E-27 2.7E-32 251.3 15.9 207 66-364 47-287 (287)
339 cd05065 PTKc_EphR_B Catalytic 99.9 1.6E-27 3.5E-32 249.0 16.6 206 65-360 53-263 (269)
340 KOG0194 Protein tyrosine kinas 99.9 6.2E-28 1.3E-32 264.3 14.0 200 66-360 210-415 (474)
341 cd07856 STKc_Sty1_Hog1 Catalyt 99.9 9.6E-28 2.1E-32 259.1 15.1 210 66-373 58-300 (328)
342 cd05097 PTKc_DDR_like Catalyti 99.9 1.5E-27 3.2E-32 253.1 16.3 204 65-360 65-291 (295)
343 cd05042 PTKc_Aatyk Catalytic d 99.9 1.3E-27 2.8E-32 249.7 15.3 202 66-360 44-265 (269)
344 cd05044 PTKc_c-ros Catalytic d 99.9 1.8E-27 3.8E-32 248.4 16.3 204 64-360 46-265 (269)
345 cd05123 STKc_AGC Catalytic dom 99.9 1.1E-27 2.3E-32 246.8 14.4 204 63-364 39-250 (250)
346 cd05039 PTKc_Csk_like Catalyti 99.9 1.7E-27 3.6E-32 246.8 15.7 199 63-360 46-251 (256)
347 PF07714 Pkinase_Tyr: Protein 99.9 3.1E-28 6.7E-33 253.8 10.1 202 66-360 50-257 (259)
348 cd06627 STKc_Cdc7_like Catalyt 99.9 1.7E-27 3.7E-32 245.5 15.5 206 63-364 45-254 (254)
349 cd05110 PTKc_HER4 Catalytic do 99.9 1.3E-27 2.8E-32 254.8 15.0 202 65-360 57-263 (303)
350 KOG1095 Protein tyrosine kinas 99.9 4.8E-28 1E-32 282.2 12.5 249 18-360 686-956 (1025)
351 cd05086 PTKc_Aatyk2 Catalytic 99.9 2.5E-27 5.5E-32 247.8 16.6 202 66-360 44-264 (268)
352 cd05100 PTKc_FGFR3 Catalytic d 99.9 1.9E-27 4.1E-32 257.2 15.9 203 65-360 65-288 (334)
353 cd05581 STKc_PDK1 Catalytic do 99.9 8.7E-28 1.9E-32 251.6 12.7 221 66-364 50-280 (280)
354 cd05043 PTK_Ryk Pseudokinase d 99.9 1.8E-27 4E-32 250.1 15.2 204 64-360 55-271 (280)
355 cd05067 PTKc_Lck_Blk Catalytic 99.9 2.4E-27 5.1E-32 246.5 15.8 200 65-360 49-255 (260)
356 cd05087 PTKc_Aatyk1_Aatyk3 Cat 99.9 2.6E-27 5.7E-32 247.5 16.3 204 64-360 42-265 (269)
357 KOG1026 Nerve growth factor re 99.9 5.1E-28 1.1E-32 272.9 11.6 203 63-359 535-756 (774)
358 KOG1027 Serine/threonine prote 99.9 1.4E-27 3E-32 266.7 14.7 210 64-367 549-773 (903)
359 cd05095 PTKc_DDR2 Catalytic do 99.9 3.1E-27 6.7E-32 250.9 16.6 203 65-360 67-292 (296)
360 cd05057 PTKc_EGFR_like Catalyt 99.9 4E-27 8.8E-32 247.5 17.1 204 63-360 55-263 (279)
361 cd05046 PTK_CCK4 Pseudokinase 99.9 2.5E-27 5.4E-32 248.2 15.4 203 64-360 55-271 (275)
362 smart00219 TyrKc Tyrosine kina 99.9 3.2E-27 6.9E-32 244.0 15.9 201 66-360 50-256 (258)
363 KOG0696 Serine/threonine prote 99.9 4.7E-28 1E-32 250.7 9.0 219 68-384 400-630 (683)
364 cd05034 PTKc_Src_like Catalyti 99.9 3.4E-27 7.4E-32 245.1 15.6 202 65-360 49-256 (261)
365 cd07829 STKc_CDK_like Catalyti 99.9 3.1E-27 6.7E-32 247.9 15.3 205 66-364 47-282 (282)
366 cd05613 STKc_MSK1_N N-terminal 99.9 2.5E-27 5.5E-32 250.5 14.6 209 65-368 52-275 (290)
367 cd05073 PTKc_Hck Catalytic dom 99.9 7.1E-27 1.5E-31 243.0 16.7 200 66-360 50-255 (260)
368 KOG1006 Mitogen-activated prot 99.9 1.9E-28 4.2E-33 241.7 3.6 228 44-367 91-333 (361)
369 cd05107 PTKc_PDGFR_beta Cataly 99.9 6.1E-27 1.3E-31 259.3 15.9 204 65-360 88-394 (401)
370 cd05038 PTKc_Jak_rpt2 Catalyti 99.9 1.2E-26 2.7E-31 243.6 16.8 206 65-360 54-278 (284)
371 PLN03225 Serine/threonine-prot 99.9 8.1E-27 1.7E-31 268.1 15.9 188 93-369 207-458 (566)
372 cd05583 STKc_MSK_N N-terminal 99.9 7.5E-27 1.6E-31 246.6 14.3 210 64-368 51-273 (288)
373 KOG0193 Serine/threonine prote 99.9 1E-27 2.2E-32 260.0 6.7 201 66-360 437-648 (678)
374 PHA02882 putative serine/threo 99.9 1.2E-26 2.5E-31 246.6 14.5 205 69-360 75-291 (294)
375 cd05074 PTKc_Tyro3 Catalytic d 99.9 2.3E-26 4.9E-31 240.6 16.4 207 65-360 49-267 (273)
376 cd08528 STKc_Nek10 Catalytic d 99.9 2.3E-26 5E-31 240.1 15.5 199 66-360 57-265 (269)
377 KOG0695 Serine/threonine prote 99.9 2.3E-27 4.9E-32 239.9 7.3 217 73-386 307-542 (593)
378 smart00220 S_TKc Serine/Threon 99.9 4E-26 8.7E-31 232.2 14.7 204 65-364 35-244 (244)
379 KOG0668 Casein kinase II, alph 99.9 1.1E-26 2.5E-31 224.6 8.1 207 65-368 80-329 (338)
380 KOG0587 Traf2- and Nck-interac 99.9 1E-25 2.2E-30 253.1 15.1 211 65-367 63-288 (953)
381 KOG4250 TANK binding protein k 99.9 3.2E-26 6.9E-31 252.8 10.3 205 14-312 6-228 (732)
382 KOG4257 Focal adhesion tyrosin 99.9 3E-26 6.5E-31 247.5 9.6 202 64-360 438-644 (974)
383 KOG4278 Protein tyrosine kinas 99.9 7.2E-26 1.6E-30 243.9 11.7 201 66-360 312-518 (1157)
384 KOG1151 Tousled-like protein k 99.9 2.2E-25 4.8E-30 232.5 12.3 214 66-367 516-747 (775)
385 KOG1290 Serine/threonine prote 99.9 6.6E-25 1.4E-29 232.5 15.6 92 66-157 123-224 (590)
386 KOG0196 Tyrosine kinase, EPH ( 99.9 1.1E-25 2.4E-30 249.1 9.4 203 64-360 677-886 (996)
387 KOG0664 Nemo-like MAPK-related 99.9 2.4E-26 5.2E-31 227.1 2.7 214 63-368 98-350 (449)
388 KOG1094 Discoidin domain recep 99.9 7.3E-26 1.6E-30 243.5 5.8 205 62-359 580-798 (807)
389 smart00750 KIND kinase non-cat 99.9 3.8E-25 8.3E-30 216.2 9.3 159 105-366 1-170 (176)
390 KOG0670 U4/U6-associated splic 99.9 4.9E-25 1.1E-29 234.2 9.3 204 66-366 477-751 (752)
391 KOG2052 Activin A type IB rece 99.9 8.7E-25 1.9E-29 229.7 10.2 212 59-359 248-497 (513)
392 KOG0199 ACK and related non-re 99.9 1.2E-24 2.7E-29 237.8 9.8 206 66-364 160-371 (1039)
393 KOG1152 Signal transduction se 99.9 7.9E-25 1.7E-29 235.4 7.9 147 66-309 615-770 (772)
394 PLN03224 probable serine/threo 99.9 1.1E-23 2.4E-28 236.9 16.8 212 66-366 221-505 (507)
395 PLN00113 leucine-rich repeat r 99.9 3.1E-24 6.8E-29 264.0 12.0 192 66-360 732-946 (968)
396 KOG3653 Transforming growth fa 99.9 2.2E-24 4.7E-29 228.3 7.5 224 40-358 231-496 (534)
397 KOG0576 Mitogen-activated prot 99.9 1.1E-23 2.5E-28 230.0 11.9 207 66-367 61-277 (829)
398 KOG1167 Serine/threonine prote 99.9 1.5E-23 3.2E-28 219.9 10.5 249 63-367 80-387 (418)
399 KOG0984 Mitogen-activated prot 99.9 2.8E-23 6E-28 198.6 9.5 159 71-324 99-268 (282)
400 KOG0200 Fibroblast/platelet-de 99.9 1.1E-22 2.4E-27 236.0 14.9 204 66-360 350-574 (609)
401 KOG1033 eIF-2alpha kinase PEK/ 99.9 1E-23 2.3E-28 227.3 3.8 183 95-364 330-515 (516)
402 KOG1025 Epidermal growth facto 99.9 5.2E-23 1.1E-27 228.7 8.4 201 66-360 747-952 (1177)
403 cd00180 PKc Catalytic domain o 99.9 8.6E-22 1.9E-26 194.9 13.4 175 64-362 38-215 (215)
404 KOG1024 Receptor-like protein 99.8 4.2E-21 9.2E-26 198.6 12.9 202 66-360 336-550 (563)
405 KOG0590 Checkpoint kinase and 99.8 3.7E-21 8.1E-26 220.9 8.6 213 64-368 368-592 (601)
406 KOG1345 Serine/threonine kinas 99.8 2.7E-20 5.9E-25 184.7 8.8 180 75-352 79-275 (378)
407 KOG4158 BRPK/PTEN-induced prot 99.8 3.8E-19 8.2E-24 184.6 12.3 227 44-360 245-512 (598)
408 smart00221 STYKc Protein kinas 99.8 6.1E-19 1.3E-23 177.8 12.3 169 64-325 44-218 (225)
409 COG0515 SPS1 Serine/threonine 99.7 6.4E-17 1.4E-21 169.9 14.6 217 63-367 43-281 (384)
410 KOG0603 Ribosomal protein S6 k 99.7 2.8E-18 6E-23 188.9 2.8 213 63-382 42-265 (612)
411 KOG1240 Protein kinase contain 99.7 1E-17 2.2E-22 192.5 1.6 202 71-361 75-291 (1431)
412 KOG0606 Microtubule-associated 99.6 1.4E-16 2.9E-21 183.4 5.6 164 131-369 153-323 (1205)
413 KOG0272 U4/U6 small nuclear ri 99.6 2.3E-15 5E-20 156.8 10.6 125 580-717 323-455 (459)
414 KOG0275 Conserved WD40 repeat- 99.6 6.3E-16 1.4E-20 155.6 5.3 112 605-718 211-332 (508)
415 KOG0271 Notchless-like WD40 re 99.6 4.2E-15 9.1E-20 153.0 10.5 118 587-713 94-226 (480)
416 KOG0271 Notchless-like WD40 re 99.6 7.5E-15 1.6E-19 151.1 10.7 109 602-718 362-477 (480)
417 PRK09188 serine/threonine prot 99.6 3.9E-15 8.5E-20 161.2 8.9 93 63-171 67-162 (365)
418 KOG0279 G protein beta subunit 99.6 1.7E-14 3.6E-19 143.5 11.1 112 601-718 99-218 (315)
419 KOG1164 Casein kinase (serine/ 99.6 5.6E-14 1.2E-18 151.5 16.0 213 63-360 62-292 (322)
420 KOG0195 Integrin-linked kinase 99.6 6.4E-15 1.4E-19 146.5 7.9 195 66-359 236-440 (448)
421 PTZ00421 coronin; Provisional 99.5 6.6E-14 1.4E-18 158.0 16.1 113 603-716 71-192 (493)
422 KOG0272 U4/U6 small nuclear ri 99.5 5.3E-15 1.1E-19 154.2 6.5 124 578-714 237-367 (459)
423 KOG0266 WD40 repeat-containing 99.5 5.1E-14 1.1E-18 158.7 14.7 108 602-716 198-312 (456)
424 PRK10359 lipopolysaccharide co 99.5 5.8E-15 1.3E-19 149.3 5.7 96 64-169 82-182 (232)
425 KOG0273 Beta-transducin family 99.5 5.4E-14 1.2E-18 148.4 11.6 109 600-716 352-476 (524)
426 KOG0263 Transcription initiati 99.5 4.8E-14 1E-18 157.2 11.7 119 587-714 512-641 (707)
427 KOG1023 Natriuretic peptide re 99.5 2.3E-13 5.1E-18 150.3 16.7 198 71-360 1-219 (484)
428 PRK10345 hypothetical protein; 99.5 3.2E-14 7E-19 143.0 8.8 99 65-168 44-156 (210)
429 PTZ00420 coronin; Provisional 99.5 3.1E-13 6.7E-18 153.7 16.3 113 603-715 70-190 (568)
430 KOG0318 WD40 repeat stress pro 99.5 3.4E-13 7.4E-18 144.0 14.1 89 592-694 180-272 (603)
431 KOG0266 WD40 repeat-containing 99.5 2.9E-13 6.2E-18 152.6 14.5 127 582-717 217-360 (456)
432 KOG0263 Transcription initiati 99.5 1.2E-13 2.7E-18 154.0 10.8 132 576-716 459-601 (707)
433 KOG0590 Checkpoint kinase and 99.5 2.8E-14 6.1E-19 164.3 4.5 213 62-366 65-291 (601)
434 PF14531 Kinase-like: Kinase-l 99.5 1.6E-14 3.4E-19 150.4 1.7 157 96-352 114-288 (288)
435 KOG1165 Casein kinase (serine/ 99.5 2.2E-13 4.8E-18 139.4 9.9 196 27-311 31-239 (449)
436 cd05147 RIO1_euk RIO kinase fa 99.4 1.3E-13 2.9E-18 136.9 6.7 101 66-174 68-170 (190)
437 KOG0283 WD40 repeat-containing 99.4 3.4E-13 7.4E-18 151.7 10.6 112 601-714 260-432 (712)
438 KOG0279 G protein beta subunit 99.4 9.5E-13 2E-17 131.2 12.4 106 603-717 59-175 (315)
439 cd05145 RIO1_like RIO kinase f 99.4 3.1E-13 6.6E-18 134.4 7.9 100 65-173 67-169 (190)
440 KOG0316 Conserved WD40 repeat- 99.4 9.5E-13 2.1E-17 128.2 10.9 104 603-715 13-124 (307)
441 KOG0284 Polyadenylation factor 99.4 3.4E-13 7.4E-18 140.2 8.2 128 576-716 154-288 (464)
442 PRK12274 serine/threonine prot 99.4 5.6E-13 1.2E-17 132.3 8.4 92 63-170 47-141 (218)
443 KOG1163 Casein kinase (serine/ 99.4 8.3E-13 1.8E-17 129.9 9.3 135 95-312 85-225 (341)
444 KOG0291 WD40-repeat-containing 99.4 1.6E-12 3.5E-17 143.9 12.5 84 603-694 346-429 (893)
445 KOG0285 Pleiotropic regulator 99.4 1.6E-12 3.4E-17 133.2 10.3 108 601-717 145-260 (460)
446 KOG0313 Microtubule binding pr 99.4 1.4E-12 3.1E-17 134.7 9.9 127 580-718 279-414 (423)
447 KOG0295 WD40 repeat-containing 99.4 4.5E-12 9.8E-17 130.4 13.5 122 586-715 253-399 (406)
448 KOG0276 Vesicle coat complex C 99.3 1.8E-12 3.8E-17 140.9 8.7 127 576-714 113-249 (794)
449 KOG0265 U5 snRNP-specific prot 99.3 8E-12 1.7E-16 125.8 12.3 86 601-694 41-127 (338)
450 KOG0645 WD40 repeat protein [G 99.3 2.2E-11 4.8E-16 121.1 13.8 116 590-715 93-218 (312)
451 KOG0282 mRNA splicing factor [ 99.3 1.4E-12 3.1E-17 138.3 5.8 107 601-714 208-322 (503)
452 KOG0319 WD40-repeat-containing 99.3 1E-11 2.2E-16 137.6 12.4 125 579-717 482-614 (775)
453 PTZ00420 coronin; Provisional 99.3 2E-11 4.3E-16 139.0 15.1 103 603-714 121-236 (568)
454 KOG0285 Pleiotropic regulator 99.3 5.7E-12 1.2E-16 129.2 8.5 128 576-717 209-344 (460)
455 KOG1407 WD40 repeat protein [F 99.3 8.1E-12 1.7E-16 123.5 8.9 108 601-713 14-127 (313)
456 KOG0283 WD40 repeat-containing 99.3 8.6E-12 1.9E-16 140.5 10.0 104 602-714 364-473 (712)
457 KOG0286 G-protein beta subunit 99.3 2.3E-11 4.9E-16 122.1 11.7 119 578-710 162-291 (343)
458 KOG0647 mRNA export protein (c 99.3 1.8E-11 3.8E-16 123.4 10.9 103 607-715 27-138 (347)
459 PTZ00421 coronin; Provisional 99.3 4.4E-11 9.6E-16 135.2 14.7 102 602-712 120-231 (493)
460 KOG0601 Cyclin-dependent kinas 99.3 9.9E-12 2.1E-16 137.6 8.5 219 59-367 159-385 (524)
461 KOG0293 WD40 repeat-containing 99.3 1.6E-11 3.5E-16 127.9 9.5 106 603-715 220-335 (519)
462 KOG0295 WD40 repeat-containing 99.3 3E-11 6.5E-16 124.4 11.2 128 576-715 209-357 (406)
463 PRK01723 3-deoxy-D-manno-octul 99.2 1.1E-11 2.3E-16 127.8 7.8 103 63-171 86-192 (239)
464 KOG0286 G-protein beta subunit 99.2 5.5E-11 1.2E-15 119.4 12.4 107 602-717 140-254 (343)
465 KOG0303 Actin-binding protein 99.2 1.8E-11 3.8E-16 127.1 9.0 112 602-714 76-195 (472)
466 KOG0316 Conserved WD40 repeat- 99.2 3.7E-11 8.1E-16 117.2 10.6 125 580-718 79-209 (307)
467 KOG0313 Microtubule binding pr 99.2 5.9E-11 1.3E-15 122.8 11.9 112 605-718 191-326 (423)
468 KOG1166 Mitotic checkpoint ser 99.2 1.2E-11 2.6E-16 145.8 7.6 123 96-307 769-899 (974)
469 KOG0275 Conserved WD40 repeat- 99.2 3.5E-12 7.7E-17 128.8 2.5 125 581-714 234-370 (508)
470 KOG1266 Protein kinase [Signal 99.2 6.5E-12 1.4E-16 128.7 4.1 206 71-367 121-337 (458)
471 KOG0645 WD40 repeat protein [G 99.2 1.2E-10 2.7E-15 115.8 12.9 108 602-715 9-128 (312)
472 KOG0302 Ribosome Assembly prot 99.2 5.4E-11 1.2E-15 123.0 10.6 107 602-714 252-371 (440)
473 KOG0292 Vesicle coat complex C 99.2 2.4E-11 5.3E-16 136.5 8.5 128 576-716 25-159 (1202)
474 KOG0606 Microtubule-associated 99.2 4.2E-11 9.1E-16 138.8 10.3 228 70-367 857-1098(1205)
475 KOG0284 Polyadenylation factor 99.2 3.2E-11 7E-16 125.7 7.6 102 581-690 193-297 (464)
476 KOG0264 Nucleosome remodeling 99.2 8.4E-11 1.8E-15 124.4 10.7 99 583-687 243-347 (422)
477 KOG0310 Conserved WD40 repeat- 99.2 1.3E-10 2.8E-15 123.9 11.9 121 580-714 131-260 (487)
478 KOG0319 WD40-repeat-containing 99.2 9.4E-11 2E-15 130.1 11.2 100 605-713 461-568 (775)
479 KOG0310 Conserved WD40 repeat- 99.2 1.6E-10 3.5E-15 123.1 12.3 106 603-716 106-220 (487)
480 PRK14879 serine/threonine prot 99.2 4.3E-11 9.2E-16 120.6 7.5 98 63-170 45-143 (211)
481 KOG0277 Peroxisomal targeting 99.2 2.9E-11 6.4E-16 119.2 5.7 109 603-718 186-305 (311)
482 KOG0315 G-protein beta subunit 99.1 2.3E-10 4.9E-15 112.7 11.1 85 603-694 211-295 (311)
483 KOG0305 Anaphase promoting com 99.1 1.5E-10 3.3E-15 127.3 10.9 84 603-694 297-383 (484)
484 smart00090 RIO RIO-like kinase 99.1 4.5E-11 9.8E-16 122.9 6.3 102 65-174 98-201 (237)
485 KOG0277 Peroxisomal targeting 99.1 2.2E-10 4.8E-15 113.1 10.4 118 590-714 127-257 (311)
486 PRK09605 bifunctional UGMP fam 99.1 7E-11 1.5E-15 136.2 7.9 94 63-170 382-476 (535)
487 KOG0973 Histone transcription 99.1 2E-10 4.3E-15 132.7 11.2 112 603-715 65-194 (942)
488 PLN00181 protein SPA1-RELATED; 99.1 5.3E-10 1.1E-14 135.1 15.3 104 603-715 571-683 (793)
489 KOG0278 Serine/threonine kinas 99.1 6.3E-11 1.4E-15 116.5 5.9 95 605-707 98-199 (334)
490 KOG0273 Beta-transducin family 99.1 4.6E-10 1E-14 119.1 11.9 123 577-708 368-509 (524)
491 KOG0315 G-protein beta subunit 99.1 4E-10 8.8E-15 110.9 10.5 98 602-708 78-183 (311)
492 KOG0772 Uncharacterized conser 99.1 1.5E-10 3.2E-15 123.7 8.0 112 602-713 162-338 (641)
493 KOG0264 Nucleosome remodeling 99.1 2.6E-10 5.6E-15 120.7 9.4 107 601-713 221-338 (422)
494 TIGR03724 arch_bud32 Kae1-asso 99.1 1.1E-10 2.5E-15 116.4 6.5 95 63-170 43-138 (199)
495 KOG0282 mRNA splicing factor [ 99.1 8.8E-11 1.9E-15 124.9 5.1 126 576-714 231-364 (503)
496 KOG0640 mRNA cleavage stimulat 99.1 3.6E-10 7.8E-15 114.1 9.2 110 603-718 168-287 (430)
497 KOG0643 Translation initiation 99.1 1.1E-09 2.3E-14 109.0 12.1 134 581-715 23-213 (327)
498 KOG1407 WD40 repeat protein [F 99.1 6.9E-10 1.5E-14 110.1 10.2 113 584-711 171-291 (313)
499 KOG1273 WD40 repeat protein [G 99.1 5E-10 1.1E-14 113.5 8.9 85 610-703 26-117 (405)
500 KOG0276 Vesicle coat complex C 99.0 1.3E-09 2.9E-14 118.9 12.1 119 584-713 79-206 (794)
No 1
>PLN00181 protein SPA1-RELATED; Provisional
Probab=100.00 E-value=5.7e-70 Score=652.65 Aligned_cols=580 Identities=60% Similarity=0.930 Sum_probs=433.9
Q ss_pred cCCCcccccccccCCccc-ccccccCCCCCCccccccccccCCCCccceeeeehhhhcccCCC-CCceeccccee----e
Q 004998 15 MEGSSDSAWQDSDSSRAL-NISGVSDRNPRLLRGERFGVRGDDSNDFELRKHSDGVELTHGDH-LRNQGGLSGVC----E 88 (720)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~e~~~Ls~l~H-pnIV~l~~~~~----~ 88 (720)
|||++++ ++|+| |++++..++.+. .+.+.| +||+++++ .+ .
T Consensus 1 ~~~~~~~------~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~-~~~~~~~ 47 (793)
T PLN00181 1 MKGSSES------NSRGLNNTSGVSEFCTDG--------------------------SKSLSHIDYVRSLLG-SHKEGNL 47 (793)
T ss_pred CCCcccC------CCcCccCcccccccCCCc--------------------------cchhhHHHHHHHhhc-ccCCccc
Confidence 7887765 78888 888888877766 234556 68888888 34 2
Q ss_pred cCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcc
Q 004998 89 NEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASC 168 (720)
Q Consensus 89 ~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a 168 (720)
++.....++.+|||.+++|.+||......+++.+++.|++||+.||+|||++|||||||||+||||+..|.+|++|||.+
T Consensus 48 ~~~~~~~~~~~~e~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP~NiLl~~~~~~k~~d~~~~ 127 (793)
T PLN00181 48 DGLDDDSIVRALECEDVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASC 127 (793)
T ss_pred cccccchhhhhhccCCccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeeccCCchhEEEcccCcEEEeecccc
Confidence 22233357888999888999999766667999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccCCCcccccccccccccccccc
Q 004998 169 SDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKIL 248 (720)
Q Consensus 169 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~ 248 (720)
.+.+.+. ...++++|||+++......... .
T Consensus 128 ~~~~~~~--------------------------~~~~ki~DfG~a~~~~~~~~~~-----------------------~- 157 (793)
T PLN00181 128 SDSGSDE--------------------------DATTKSREIGSSRREEILSERR-----------------------I- 157 (793)
T ss_pred Ccccccc--------------------------cCcccccccccccccccccccc-----------------------h-
Confidence 7654321 1235679999987432110000 0
Q ss_pred ccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhccccCCCCchHHHHHHHhhcCCCCc
Q 004998 249 DNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFCPFSTGEEKTRTMSSLRHRVLPP 328 (720)
Q Consensus 249 d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLltpf~~~~~~~~~~~~l~~~~~p~ 328 (720)
..........++......+||++|||||++.+..|+.++|||||||+||||++|+.+.......+..+....+|+
T Consensus 158 -----~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~~~~~~~~~~~~~ 232 (793)
T PLN00181 158 -----EKLEEVKKQPFPMKQILAMEMSWYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSRTMSSLRHRVLPP 232 (793)
T ss_pred -----hhhhccccCCCcccccccCCCcceEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHHHHHHHHHhhcCh
Confidence 000011122233333446899999999999999999999999999999999998877665555566666666676
Q ss_pred cccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCccchHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 004998 329 QLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEEREAAIELREQIDEEELLLEFLLLVQQRKQESAKKL 408 (720)
Q Consensus 329 ~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~~l~e~~~~~~~~e~~~~~e~L~~fL~~l~~qK~e~~~~l 408 (720)
.....++...+++.+||+++|.+||++.|+|+||||......+.+++......+..++.+.+.+|+...++++++++.++
T Consensus 233 ~~~~~~~~~~~~~~~~L~~~P~~Rps~~eil~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 312 (793)
T PLN00181 233 QILLNWPKEASFCLWLLHPEPSCRPSMSELLQSEFINEPRENLEEREAAMELRDRIEEQELLLEFLFLIQQRKQEAADKL 312 (793)
T ss_pred hhhhcCHHHHHHHHHhCCCChhhCcChHHHhhchhhhhhhHHhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 66667788889999999999999999999999999998765555555555555555666777888888889999999999
Q ss_pred HHHHHhhhcchHHHHHHHHHHHhcCCCCcchhcccccCCCCCCCCccccCCCCCcccCcccccccccccccccccccccc
Q 004998 409 QDIVSFICSDIEEVSKQQAILRKKGGLGSFAELANDDLSGLNIPSLNIIDNDCSATMGSRKRFRPELQLHHLEECDDNLD 488 (720)
Q Consensus 409 q~el~~Le~Di~evE~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 488 (720)
+.+++.|+.||+++++|+......+... ......++++..+......+.....
T Consensus 313 ~~~~~~l~~~i~~~~~r~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~~~~~~~~~~-- 365 (793)
T PLN00181 313 QDTISLLSSDIDQVVKRQLVLQQKGSDV-------------------------RSFLASRKRIRQGAETLAAEEENDD-- 365 (793)
T ss_pred HHHHHHHHHHHHHHHhhhhhhccccccc-------------------------ccccccchhhhccccchhhcccccc--
Confidence 9999999999999998775543322111 1112223333333322211111110
Q ss_pred ccccCCCCCCccchhhhhhHHHHhHhHHHHHHHhhccCCCCC---CCCCccccccCCC-CCCCCCcccccccccccCCCc
Q 004998 489 DNQKHNLTGNEERSLFKSSRLMKNFKKLESAYFLTRCRPVKP---SGRPLVRHSQLSS-DGRTSKPLVNERSSINNLGSK 564 (720)
Q Consensus 489 ~~~~~~~~~~~~~~~~~~~r~~~~~~~l~~~y~~~r~~~~~~---~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 564 (720)
..+....+..+.+++++|||.||++||+|||++|++.... ..++..+.++... +++++ +.++.++.+..
T Consensus 366 --~~~~~~~~~~s~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 438 (793)
T PLN00181 366 --NSSKLDDTLESTLLESSRLMRNLKKLESVYFATRYRQIKAAAAAEKPLARYYSALSENGRSS-----EKSSMSNPAKP 438 (793)
T ss_pred --ccccccccccccchhhhHHHHHHHHHHHHHhhhhhccccccccccccccccccccccccccc-----ccccccccccc
Confidence 0001223446677889999999999999999999865332 3444444444443 33332 33444444333
Q ss_pred cC-c-cCCCCCccccchhhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCccccc
Q 004998 565 EG-Y-SEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINE 642 (720)
Q Consensus 565 ~~-~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~ 642 (720)
+. | ....+++|+++|+++|+++++++++++.+.++.|++.+|.+.|++|+|+|||++|||||.|++|+|||+......
T Consensus 439 ~~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~fs~dg~~latgg~D~~I~iwd~~~~~~~ 518 (793)
T PLN00181 439 PDFYINDSRQGGWIDPFLEGLCKYLSFSKLRVKADLKQGDLLNSSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKD 518 (793)
T ss_pred ccccccccccccchhhhhhhhhhhhcccceEEEEeeccccccCCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCccccc
Confidence 22 2 122366789999999999999999999999999999999999999999999999999999999999998765444
Q ss_pred ccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecC-CceEEEecCccc
Q 004998 643 NRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNK-LLIIFRYGMFQE 714 (720)
Q Consensus 643 ~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~-------v~~v~~~~-~~~~~~~~~~~~ 714 (720)
..+.|+|+..+.++++|.+++|+|+++++|||+++||+|+|||+.+++.+.+ |++++|++ .+..+++|+.|.
T Consensus 519 ~~~~~~~~~~~~~~~~v~~l~~~~~~~~~las~~~Dg~v~lWd~~~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg 598 (793)
T PLN00181 519 GRDIHYPVVELASRSKLSGICWNSYIKSQVASSNFEGVVQVWDVARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDG 598 (793)
T ss_pred ccccccceEEecccCceeeEEeccCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCC
Confidence 4567788888888889999999998888999999999999999999988765 89999996 789999999986
Q ss_pred eE
Q 004998 715 VK 716 (720)
Q Consensus 715 ~~ 716 (720)
.-
T Consensus 599 ~v 600 (793)
T PLN00181 599 SV 600 (793)
T ss_pred EE
Confidence 43
No 2
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3e-43 Score=364.98 Aligned_cols=250 Identities=17% Similarity=0.166 Sum_probs=184.7
Q ss_pred ccccCCcccccccccC------CCCCCccccccc-cccCCC----CccceeeeehhhhcccCCCCCceecccceeecCCC
Q 004998 24 QDSDSSRALNISGVSD------RNPRLLRGERFG-VRGDDS----NDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAA 92 (720)
Q Consensus 24 ~~~~~~~~~~~~~~~~------~~~~~~~~~~~~-~~~~~~----~~~~~r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~ 92 (720)
...-.++.+|.|+++. ++.+...+.+|. .+.... ....++-.+|..+|.+|+|||||++++ +|+...
T Consensus 172 d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d-~f~~~d- 249 (475)
T KOG0615|consen 172 DYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKD-FFEVPD- 249 (475)
T ss_pred ceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEee-eeecCC-
Confidence 3444567777777665 444443333333 222111 123334468889999999999999999 776665
Q ss_pred CCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEccC---CceEEeccCcc
Q 004998 93 IDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSF---NHVSFIESASC 168 (720)
Q Consensus 93 ~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~---~~vkliDfg~a 168 (720)
..|+|||| .||+|.+++-.++. +.+...+.+++|++.||.|||++||+||||||+|||+..+ ..+||+|||+|
T Consensus 250 --s~YmVlE~v~GGeLfd~vv~nk~-l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlA 326 (475)
T KOG0615|consen 250 --SSYMVLEYVEGGELFDKVVANKY-LREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLA 326 (475)
T ss_pred --ceEEEEEEecCccHHHHHHhccc-cccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecccchh
Confidence 45999999 99999999955544 8999999999999999999999999999999999999865 66788777666
Q ss_pred cCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccCCCcccccccccccccccccc
Q 004998 169 SDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKIL 248 (720)
Q Consensus 169 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~ 248 (720)
+..|.. .|
T Consensus 327 K~~g~~----------------------------------sf-------------------------------------- 334 (475)
T KOG0615|consen 327 KVSGEG----------------------------------SF-------------------------------------- 334 (475)
T ss_pred hccccc----------------------------------ee--------------------------------------
Confidence 544321 00
Q ss_pred ccccchhhhhcccCCCCccccccccCCcccCCccccCCC---CCccccchhhhhhhhhccccCCCC---chHHHHHHHhh
Q 004998 249 DNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP---VSCASDIYRLGVLLFELFCPFSTG---EEKTRTMSSLR 322 (720)
Q Consensus 249 d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~---~s~~sDIwSLGvll~eLltpf~~~---~~~~~~~~~l~ 322 (720)
-...+|||.|.|||++.+.. +..++|||||||+||-+|++|.++ .....+...+.
T Consensus 335 -------------------m~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~ 395 (475)
T KOG0615|consen 335 -------------------MKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQIL 395 (475)
T ss_pred -------------------hhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHh
Confidence 01268999999999998776 344899999999999999955444 33333455555
Q ss_pred cCCC--CccccccCchH-HHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004998 323 HRVL--PPQLLLKFPKE-ASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 323 ~~~~--p~~~~~~~p~~-~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
.+.+ -|..+...+++ .+||.+||..||++|||+.|+|+||||+....
T Consensus 396 ~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~~~~~ 445 (475)
T KOG0615|consen 396 KGRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALNHPWFKDAPC 445 (475)
T ss_pred cCcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcChhhhcccc
Confidence 5443 23334444444 49999999999999999999999999997643
No 3
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=1e-39 Score=336.92 Aligned_cols=208 Identities=22% Similarity=0.271 Sum_probs=174.1
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH-cCce
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-QGIV 143 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs-~gIv 143 (720)
+|..+|...+||+||++|++|+.... .++++||| +||+|.++++..++ ++|...-.|+.+|+.||.|||. ++||
T Consensus 126 rEl~il~~~~spyIV~~ygaF~~~~~---~isI~mEYMDgGSLd~~~k~~g~-i~E~~L~~ia~~VL~GL~YLh~~~~II 201 (364)
T KOG0581|consen 126 RELEILRSCQSPYIVGFYGAFYSNGE---EISICMEYMDGGSLDDILKRVGR-IPEPVLGKIARAVLRGLSYLHEERKII 201 (364)
T ss_pred HHHHHHhhCCCCCeeeEeEEEEeCCc---eEEeehhhcCCCCHHHHHhhcCC-CCHHHHHHHHHHHHHHHHHHhhccCee
Confidence 89999999999999999996665553 47999999 99999999966544 9999999999999999999995 9999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++..|.|||||||.+...... +
T Consensus 202 HRDIKPsNlLvNskGeVKicDFGVS~~lvnS-------------------------------------~----------- 233 (364)
T KOG0581|consen 202 HRDIKPSNLLVNSKGEVKICDFGVSGILVNS-------------------------------------I----------- 233 (364)
T ss_pred eccCCHHHeeeccCCCEEeccccccHHhhhh-------------------------------------h-----------
Confidence 9999999999999999999999987332000 0
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
....+||..|||||.+.+..|+.++||||||+.++|
T Consensus 234 --------------------------------------------a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE 269 (364)
T KOG0581|consen 234 --------------------------------------------ANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLE 269 (364)
T ss_pred --------------------------------------------cccccccccccChhhhcCCcCCcccceecccHHHHH
Confidence 012589999999999999999999999999999999
Q ss_pred ccc---cCCCC----chHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004998 304 LFC---PFSTG----EEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 304 Llt---pf~~~----~~~~~~~~~l~~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
|++ ||.+. ......+..|.....|......++ +..+|+..||++||.+||++.|+|+|||+++...
T Consensus 270 ~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~Hpfi~~~~~ 343 (364)
T KOG0581|consen 270 LAIGRFPYPPPNPPYLDIFELLCAIVDEPPPRLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQHPFIKKFED 343 (364)
T ss_pred HhhCCCCCCCcCCCCCCHHHHHHHHhcCCCCCCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhcCHHHhhccc
Confidence 999 66653 456677777776554444443354 4569999999999999999999999999997643
No 4
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.3e-38 Score=346.64 Aligned_cols=234 Identities=20% Similarity=0.263 Sum_probs=190.2
Q ss_pred CCCCCcccccccccc-CCCCccceeeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCC
Q 004998 40 RNPRLLRGERFGVRG-DDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRS 117 (720)
Q Consensus 40 ~~~~~~~~~~~~~~~-~~~~~~~~r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~ 117 (720)
...+..++.+++... ..+..--.+.|+|+++|.-+.||||+++|++| ++.. ++|+|.|| .||.|+++|..++.
T Consensus 34 ~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVw-e~~~---~lylvlEyv~gGELFdylv~kG~- 108 (786)
T KOG0588|consen 34 AETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVW-ENKQ---HLYLVLEYVPGGELFDYLVRKGP- 108 (786)
T ss_pred ccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeee-ccCc---eEEEEEEecCCchhHHHHHhhCC-
Confidence 556666777666554 44555566899999999999999999999944 4443 68999999 99999999966554
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchh
Q 004998 118 VDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLD 197 (720)
Q Consensus 118 l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (720)
+++.++.++|+||+.||.|||..+|+||||||+|+||+..+++||+|||+|..--.
T Consensus 109 l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~------------------------ 164 (786)
T KOG0588|consen 109 LPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKNNIKIADFGMASLEVP------------------------ 164 (786)
T ss_pred CCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhcccCEeeeccceeecccC------------------------
Confidence 99999999999999999999999999999999999999999999998888732100
Q ss_pred hHhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcc
Q 004998 198 MLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWY 277 (720)
Q Consensus 198 ~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y 277 (720)
.++.. ..||+|+|
T Consensus 165 -----------------------------------------------gklLe--------------------TSCGSPHY 177 (786)
T KOG0588|consen 165 -----------------------------------------------GKLLE--------------------TSCGSPHY 177 (786)
T ss_pred -----------------------------------------------Ccccc--------------------ccCCCccc
Confidence 01111 14899999
Q ss_pred cCCccccCCCC-Cccccchhhhhhhhhccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCC
Q 004998 278 ASPEELAGAPV-SCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGR 352 (720)
Q Consensus 278 ~APE~l~~~~~-s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~li~~~L~~dP~~R 352 (720)
.|||++.|.+| +.++||||.|||||.||+ ||+..+.. ..+..++++.+.-. ..+ ++..+||.+||..||++|
T Consensus 178 A~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir-~LLlKV~~G~f~MP--s~Is~eaQdLLr~ml~VDp~~R 254 (786)
T KOG0588|consen 178 AAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIR-VLLLKVQRGVFEMP--SNISSEAQDLLRRMLDVDPSTR 254 (786)
T ss_pred CCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHH-HHHHHHHcCcccCC--CcCCHHHHHHHHHHhccCcccc
Confidence 99999999997 899999999999999999 89865554 56667777765322 334 445599999999999999
Q ss_pred CChHHHHcCcccCCCccchH
Q 004998 353 PKMGELLQSEFLNEPRDSME 372 (720)
Q Consensus 353 pta~eiL~hp~~~~~~~~l~ 372 (720)
.|++||+.|||+.+....-.
T Consensus 255 iT~~eI~kHP~l~g~~~~~~ 274 (786)
T KOG0588|consen 255 ITTEEILKHPFLSGYTSLPS 274 (786)
T ss_pred ccHHHHhhCchhhcCCCCCh
Confidence 99999999999998755433
No 5
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=7.4e-39 Score=317.41 Aligned_cols=204 Identities=18% Similarity=0.258 Sum_probs=165.4
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHH---hCCCCCCCHHHHHHHHHHHHHHHHHHHH--
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWL---DKPKRSVDVYECLHIFRQIVEIVYAAHS-- 139 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L---~~~~~~l~~~~~~~i~~QIl~aL~yLHs-- 139 (720)
.|+-+|++|+|||||++|+..+..+.. -++||||| .+|+|.+.| ++..+.+++..++.+|.|++.||.++|+
T Consensus 67 ~Ei~lLkQL~HpNIVqYy~~~f~~~~e--vlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~ 144 (375)
T KOG0591|consen 67 KEISLLKQLNHPNIVQYYAHSFIEDNE--VLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKI 144 (375)
T ss_pred HHHHHHHhcCCchHHHHHHHhhhccch--hhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccc
Confidence 788899999999999999944433332 36899999 999999988 4456669999999999999999999999
Q ss_pred cC--ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCC
Q 004998 140 QG--IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 140 ~g--IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~ 217 (720)
.. |+||||||.||+|+.+|.|||.|||++ ++..
T Consensus 145 ~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~---------------------------------------------r~l~ 179 (375)
T KOG0591|consen 145 PRGTVMHRDIKPANIFLTANGVVKLGDFGLG---------------------------------------------RFLS 179 (375)
T ss_pred cccceeeccCcchheEEcCCCceeeccchhH---------------------------------------------hHhc
Confidence 45 999999999999999999999655555 3322
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhh
Q 004998 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRL 297 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSL 297 (720)
..... ....+|||+||+||.+.+.+|+++||||||
T Consensus 180 s~~tf---------------------------------------------A~S~VGTPyYMSPE~i~~~~Y~~kSDiWsl 214 (375)
T KOG0591|consen 180 SKTTF---------------------------------------------AHSLVGTPYYMSPERIHESGYNFKSDIWSL 214 (375)
T ss_pred chhHH---------------------------------------------HHhhcCCCcccCHHHHhcCCCCcchhHHHH
Confidence 21111 123799999999999999999999999999
Q ss_pred hhhhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchH-HHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 298 GVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKE-ASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 298 Gvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~-~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
||++|||+. ||.+. ........|.++.+||-+...++.. ..+|..|+.+||..||+. +|++...
T Consensus 215 GCllyEMcaL~~PF~g~-n~~~L~~KI~qgd~~~~p~~~YS~~l~~li~~ci~vd~~~RP~t-----~~~v~di 282 (375)
T KOG0591|consen 215 GCLLYEMCALQSPFYGD-NLLSLCKKIEQGDYPPLPDEHYSTDLRELINMCIAVDPEQRPDT-----VPYVQDI 282 (375)
T ss_pred HHHHHHHHhcCCCcccc-cHHHHHHHHHcCCCCCCcHHHhhhHHHHHHHHHccCCcccCCCc-----chHHHHH
Confidence 999999998 89887 5557777888888877664555444 489999999999999986 4554444
No 6
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.7e-38 Score=345.10 Aligned_cols=243 Identities=21% Similarity=0.236 Sum_probs=187.0
Q ss_pred ccCCcccccccccC------CCCCCccccccccccC-CCCccceeeeehhhhcccCCCCCceecccceeecCCCCCcEEE
Q 004998 26 SDSSRALNISGVSD------RNPRLLRGERFGVRGD-DSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVH 98 (720)
Q Consensus 26 ~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~-~~~~~~~r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~l 98 (720)
..-++-+|-|+|.. .+.+...+.+++-... -....+-+-.+|+.|.++|+|||||++|+ +|++.. .+|+
T Consensus 20 Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~-~FEDs~---nVYi 95 (592)
T KOG0575|consen 20 YKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYH-FFEDSN---NVYI 95 (592)
T ss_pred eeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeee-EeecCC---ceEE
Confidence 33456677777766 2344444444443311 11222224447888999999999999999 888886 6799
Q ss_pred EEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcc
Q 004998 99 AIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHE 177 (720)
Q Consensus 99 v~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~ 177 (720)
|+|+ ..++|.++++ ...+++|.+++.+++||+.||.|||+++|||||||..||||+++.+|||.|||+|.....+
T Consensus 96 vLELC~~~sL~el~K-rrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~--- 171 (592)
T KOG0575|consen 96 VLELCHRGSLMELLK-RRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYD--- 171 (592)
T ss_pred EEEecCCccHHHHHH-hcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCcCcEEecccceeeeecCc---
Confidence 9999 8999999886 4456999999999999999999999999999999999999999999999887777432111
Q ss_pred cccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhh
Q 004998 178 EGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQV 257 (720)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~ 257 (720)
T Consensus 172 -------------------------------------------------------------------------------- 171 (592)
T KOG0575|consen 172 -------------------------------------------------------------------------------- 171 (592)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhccc---cCCCCchHHHHHHHhhcCC--CCccccc
Q 004998 258 EEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRV--LPPQLLL 332 (720)
Q Consensus 258 ~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~--~p~~~~~ 332 (720)
++++ .+.+|||.|+|||++....+++.+||||+||+||.||+ ||....- ..++..|.... +|. .
T Consensus 172 ~Erk-------~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~v-kety~~Ik~~~Y~~P~---~ 240 (592)
T KOG0575|consen 172 GERK-------KTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTV-KETYNKIKLNEYSMPS---H 240 (592)
T ss_pred cccc-------ceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchH-HHHHHHHHhcCccccc---c
Confidence 0111 12689999999999999999999999999999999999 5555433 35666666433 333 3
Q ss_pred cCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 333 KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 333 ~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
..+..++||.+||.+||.+|||+++||.|+||...
T Consensus 241 ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff~~g 275 (592)
T KOG0575|consen 241 LSAEAKDLIRKLLRPNPSERPSLDEVLDHPFFKSG 275 (592)
T ss_pred cCHHHHHHHHHHhcCCcccCCCHHHHhcCHhhhCC
Confidence 34555699999999999999999999999999554
No 7
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=1.4e-38 Score=318.42 Aligned_cols=215 Identities=18% Similarity=0.262 Sum_probs=167.4
Q ss_pred Cccceeee--ehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHH
Q 004998 58 NDFELRKH--SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVY 135 (720)
Q Consensus 58 ~~~~~r~~--~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~ 135 (720)
.+...++. ||+.+|.+++|||+|.+++ +|.... .+++|+||...++.+-|......++...++.|++|++.|+.
T Consensus 40 dd~~VkKIAlREIrmLKqLkH~NLVnLiE-VFrrkr---klhLVFE~~dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~ 115 (396)
T KOG0593|consen 40 DDPVVKKIALREIRMLKQLKHENLVNLIE-VFRRKR---KLHLVFEYCDHTVLHELERYPNGVPSELVKKYLYQLLKAIH 115 (396)
T ss_pred ccHHHHHHHHHHHHHHHhcccchHHHHHH-HHHhcc---eeEEEeeecchHHHHHHHhccCCCCHHHHHHHHHHHHHHhh
Confidence 34555555 8999999999999999999 444433 57999999888888888777777999999999999999999
Q ss_pred HHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccC
Q 004998 136 AAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTA 215 (720)
Q Consensus 136 yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~ 215 (720)
|+|++++|||||||+||||+.+|.+||||||+|+....+ +|.
T Consensus 116 ~cHk~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~p---------------------------------gd~----- 157 (396)
T KOG0593|consen 116 FCHKNNCIHRDIKPENILITQNGVVKLCDFGFARTLSAP---------------------------------GDN----- 157 (396)
T ss_pred hhhhcCeecccCChhheEEecCCcEEeccchhhHhhcCC---------------------------------cch-----
Confidence 999999999999999999999999999998888554221 000
Q ss_pred CCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-CCCccccc
Q 004998 216 PTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDI 294 (720)
Q Consensus 216 ~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDI 294 (720)
-+.++.|.||+|||.+.|. +|++++||
T Consensus 158 ----------------------------------------------------YTDYVATRWYRaPELLvGDtqYG~pVDi 185 (396)
T KOG0593|consen 158 ----------------------------------------------------YTDYVATRWYRAPELLVGDTQYGKPVDI 185 (396)
T ss_pred ----------------------------------------------------hhhhhhhhhccChhhhcccCcCCCcccc
Confidence 0225789999999999995 59999999
Q ss_pred hhhhhhhhhccc--cCCCC-chHHHHHHHhhc-CCC------------------------CccccccCch----HHHHHH
Q 004998 295 YRLGVLLFELFC--PFSTG-EEKTRTMSSLRH-RVL------------------------PPQLLLKFPK----EASFCL 342 (720)
Q Consensus 295 wSLGvll~eLlt--pf~~~-~~~~~~~~~l~~-~~~------------------------p~~~~~~~p~----~~~li~ 342 (720)
||+||++.||++ |+.+. .+....+..... +.+ +..+...+|. .++|+.
T Consensus 186 WAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k 265 (396)
T KOG0593|consen 186 WAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLK 265 (396)
T ss_pred hhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeeecCCCCCccchhhhcccchHHHHHHHH
Confidence 999999999999 55444 333332222111 111 1112223332 349999
Q ss_pred HcCCCCCCCCCChHHHHcCcccCC
Q 004998 343 WLLHPEPSGRPKMGELLQSEFLNE 366 (720)
Q Consensus 343 ~~L~~dP~~Rpta~eiL~hp~~~~ 366 (720)
.||+.||.+|++.+++|.||||..
T Consensus 266 ~cL~~dP~~R~sc~qll~H~yFd~ 289 (396)
T KOG0593|consen 266 KCLKMDPDDRLSCEQLLHHPYFDG 289 (396)
T ss_pred HHhcCCccccccHHHHhcChHHHH
Confidence 999999999999999999999943
No 8
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-38 Score=327.52 Aligned_cols=225 Identities=18% Similarity=0.269 Sum_probs=179.8
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|+.||.+++||.||+++. .|++.. .+|+|+|| .||.|+-.|.+.+. +++..++.|+..|+.||.|||++||||
T Consensus 74 ~Er~IL~~v~hPFiv~l~y-sFQt~~---kLylVld~~~GGeLf~hL~~eg~-F~E~~arfYlaEi~lAL~~LH~~gIiy 148 (357)
T KOG0598|consen 74 AERNILSKIKHPFIVKLIY-SFQTEE---KLYLVLDYLNGGELFYHLQREGR-FSEDRARFYLAEIVLALGYLHSKGIIY 148 (357)
T ss_pred HHHHHHHhCCCCcEeeeEE-ecccCC---eEEEEEeccCCccHHHHHHhcCC-cchhHHHHHHHHHHHHHHHHHhCCeee
Confidence 7788999999999999999 677765 67999999 99999999965554 999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+||||+..|+++|+|||+|+..-... +
T Consensus 149 RDlKPENILLd~~GHi~LtDFgL~k~~~~~~---------------------------------~--------------- 180 (357)
T KOG0598|consen 149 RDLKPENILLDEQGHIKLTDFGLCKEDLKDG---------------------------------D--------------- 180 (357)
T ss_pred ccCCHHHeeecCCCcEEEeccccchhcccCC---------------------------------C---------------
Confidence 9999999999999999999999884321110 0
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhc
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 304 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eL 304 (720)
.....+||+.|||||++.+.+|+.++|+|||||++|||
T Consensus 181 ------------------------------------------~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeM 218 (357)
T KOG0598|consen 181 ------------------------------------------ATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEM 218 (357)
T ss_pred ------------------------------------------ccccccCCccccChHHHhcCCCCcccchHhHHHHHHHH
Confidence 00115899999999999999999999999999999999
Q ss_pred cc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCC----ChHHHHcCcccCCC-ccchHHHHH
Q 004998 305 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP----KMGELLQSEFLNEP-RDSMEEREA 376 (720)
Q Consensus 305 lt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rp----ta~eiL~hp~~~~~-~~~l~e~~~ 376 (720)
++ ||...+.. .++..+.+...+....-..+...+|+.++|..||.+|. .+.+|-+||||... ++.+..++.
T Consensus 219 L~G~pPF~~~~~~-~~~~~I~~~k~~~~p~~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~HpfF~~inW~~l~~k~l 297 (357)
T KOG0598|consen 219 LTGKPPFYAEDVK-KMYDKILKGKLPLPPGYLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRHPFFKGINWEKLLAKKL 297 (357)
T ss_pred hhCCCCCcCccHH-HHHHHHhcCcCCCCCccCCHHHHHHHHHHhccCHHHhcCCCCChHHhhcCcccccCCHHHHHhcCC
Confidence 99 66665544 45555554432222111334556999999999999995 78999999999987 555666555
Q ss_pred HHHHhhhhhH
Q 004998 377 AIELREQIDE 386 (720)
Q Consensus 377 ~~~~~e~~~~ 386 (720)
.+++.+....
T Consensus 298 ~PpF~P~~~~ 307 (357)
T KOG0598|consen 298 SPPFKPNVTG 307 (357)
T ss_pred CCCeecCCCC
Confidence 5555554443
No 9
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-38 Score=333.18 Aligned_cols=208 Identities=21% Similarity=0.301 Sum_probs=167.0
Q ss_pred ehhhhcccCC-CCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l~-HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
||+..|.+|+ |||||+|++++.+.+. .+|+||||+..+|.++++.+++.+++..++.|++||++||+|+|.+|+.|
T Consensus 57 REvksL~kln~hpniikL~Evi~d~~~---~L~fVfE~Md~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFH 133 (538)
T KOG0661|consen 57 REVKSLRKLNPHPNIIKLKEVIRDNDR---ILYFVFEFMDCNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFH 133 (538)
T ss_pred HHHHHHHhcCCCCcchhhHHHhhccCc---eEeeeHHhhhhhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCccc
Confidence 8888999999 9999999995555443 68999999999999999777888999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+|||+.....+||+|||+|+...+.
T Consensus 134 RDlKPENiLi~~~~~iKiaDFGLARev~Sk-------------------------------------------------- 163 (538)
T KOG0661|consen 134 RDLKPENILISGNDVIKIADFGLAREVRSK-------------------------------------------------- 163 (538)
T ss_pred ccCChhheEecccceeEecccccccccccC--------------------------------------------------
Confidence 999999999998899999888887543111
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC-CCccccchhhhhhhhh
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFE 303 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGvll~e 303 (720)
.| -+.++-|.||+|||+|.... |+.++||||+|||++|
T Consensus 164 ---------------------------------------pP--YTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aE 202 (538)
T KOG0661|consen 164 ---------------------------------------PP--YTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAE 202 (538)
T ss_pred ---------------------------------------CC--cchhhhcccccchHHhhhccccCCchHHHHHHHHHHH
Confidence 00 12368899999999987665 9999999999999999
Q ss_pred ccc--c-CCCCchHHHHHHHhh---cC-----------------CCCc-------c-ccccCchHHHHHHHcCCCCCCCC
Q 004998 304 LFC--P-FSTGEEKTRTMSSLR---HR-----------------VLPP-------Q-LLLKFPKEASFCLWLLHPEPSGR 352 (720)
Q Consensus 304 Llt--p-f~~~~~~~~~~~~l~---~~-----------------~~p~-------~-~~~~~p~~~~li~~~L~~dP~~R 352 (720)
+.+ | |++..+.++.++... .. .+|. . ++...++.++||.+||.+||.+|
T Consensus 203 l~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kR 282 (538)
T KOG0661|consen 203 LYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKR 282 (538)
T ss_pred HHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccC
Confidence 998 6 445455444433221 10 1111 1 12222344599999999999999
Q ss_pred CChHHHHcCcccCCC
Q 004998 353 PKMGELLQSEFLNEP 367 (720)
Q Consensus 353 pta~eiL~hp~~~~~ 367 (720)
|||.|+|+||||+..
T Consensus 283 pTA~~al~~pffq~~ 297 (538)
T KOG0661|consen 283 PTASQALQHPFFQVG 297 (538)
T ss_pred ccHHHHhcCcccccc
Confidence 999999999999976
No 10
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=8.5e-38 Score=334.20 Aligned_cols=216 Identities=18% Similarity=0.268 Sum_probs=172.3
Q ss_pred ehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 66 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
+|...|.+| .||.||+||. -|+|+. .+|+|+|| .+|+|.++|++.+. |++..++.|+.||++||+|||++|||
T Consensus 122 ~Ek~~l~~L~~hPgivkLy~-TFQD~~---sLYFvLe~A~nGdll~~i~K~Gs-fde~caR~YAAeIldAleylH~~GII 196 (604)
T KOG0592|consen 122 REKEALTQLSGHPGIVKLYF-TFQDEE---SLYFVLEYAPNGDLLDLIKKYGS-FDETCARFYAAEILDALEYLHSNGII 196 (604)
T ss_pred HHHHHHHHhhCCCCeEEEEE-Eeeccc---ceEEEEEecCCCcHHHHHHHhCc-chHHHHHHHHHHHHHHHHHHHhcCce
Confidence 666778888 8999999999 677765 46999999 99999999977654 99999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+||||+.+++++|.|||.++.++....... ++.
T Consensus 197 HRDlKPENILLd~dmhikITDFGsAK~l~~~~~~~~-------------------------------~~~---------- 235 (604)
T KOG0592|consen 197 HRDLKPENILLDKDGHIKITDFGSAKILSPSQKSQE-------------------------------NPV---------- 235 (604)
T ss_pred eccCChhheeEcCCCcEEEeeccccccCChhhcccc-------------------------------Ccc----------
Confidence 999999999999999999999999976533211000 000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
. .... .. .....+||..|.+||+|.....++++|||+||||||.
T Consensus 236 --------~------------~~~a---------~s-------~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQ 279 (604)
T KOG0592|consen 236 --------D------------PNQA---------SS-------RRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQ 279 (604)
T ss_pred --------C------------cccc---------cC-------cccceeeeecccCHHHhcCCCCCcccchHHHHHHHHH
Confidence 0 0000 00 0123799999999999999999999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhc--CCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 304 LFC---PFSTGEEKTRTMSSLRH--RVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~--~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|+. ||...++. .+++.|.+ -.+|+.++ +...+|+.++|..||.+|+|+.+|.+||||...
T Consensus 280 mlaG~PPFra~Ney-liFqkI~~l~y~fp~~fp---~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF~~V 344 (604)
T KOG0592|consen 280 MLAGQPPFRAANEY-LIFQKIQALDYEFPEGFP---EDARDLIKKLLVRDPSDRLTSQQIKAHPFFEGV 344 (604)
T ss_pred HhcCCCCCccccHH-HHHHHHHHhcccCCCCCC---HHHHHHHHHHHccCccccccHHHHhhCcccccC
Confidence 999 77776665 34444443 23444432 334499999999999999999999999999988
No 11
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.4e-37 Score=322.41 Aligned_cols=216 Identities=21% Similarity=0.250 Sum_probs=167.7
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
.++|..+|++++|||||+++| ....... ..+++.||| .||+|.+++.+.+..+++..++.+.+||++||.|||++||
T Consensus 61 l~~Ei~iL~~l~~p~IV~~~G-~~~~~~~-~~~~i~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~ 138 (313)
T KOG0198|consen 61 LEREIRILSRLNHPNIVQYYG-SSSSREN-DEYNIFMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGI 138 (313)
T ss_pred HHHHHHHHHhCCCCCEEeeCC-ccccccC-eeeEeeeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence 358889999999999999999 3222222 368999999 9999999997665479999999999999999999999999
Q ss_pred eeccCCCCcEEEcc-CCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 143 VVHNVRPSCFVMSS-FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 143 vHrDLKP~NILl~~-~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|||||||+|||++. ++.+||+|||++........
T Consensus 139 vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~--------------------------------------------- 173 (313)
T KOG0198|consen 139 VHCDIKPANILLDPSNGDVKLADFGLAKKLESKGT--------------------------------------------- 173 (313)
T ss_pred eccCcccceEEEeCCCCeEEeccCccccccccccc---------------------------------------------
Confidence 99999999999999 79999999998744321000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-CCCccccchhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVL 300 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGvl 300 (720)
.+.......||+.|||||++.++ ...+++|||||||+
T Consensus 174 ------------------------------------------~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCt 211 (313)
T KOG0198|consen 174 ------------------------------------------KSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCT 211 (313)
T ss_pred ------------------------------------------cccccccccCCccccCchhhcCCCcCCccchhhhcCCE
Confidence 00001125799999999999853 24469999999999
Q ss_pred hhhccc---cCCC-CchHHHHHHHhhcCCCCccccccCchH-HHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004998 301 LFELFC---PFST-GEEKTRTMSSLRHRVLPPQLLLKFPKE-ASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 301 l~eLlt---pf~~-~~~~~~~~~~l~~~~~p~~~~~~~p~~-~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
+.||+| ||.. ................| .++...+.. .+|+.+||..||++||||.++|+|||+.....
T Consensus 212 VvEM~Tg~~PW~~~~~~~~~~~~ig~~~~~P-~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~~~ 284 (313)
T KOG0198|consen 212 VVEMLTGKPPWSEFFEEAEALLLIGREDSLP-EIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQNSI 284 (313)
T ss_pred EEeccCCCCcchhhcchHHHHHHHhccCCCC-CCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhcccc
Confidence 999999 4544 22233344444444444 444445544 49999999999999999999999999987643
No 12
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-36 Score=329.71 Aligned_cols=202 Identities=25% Similarity=0.383 Sum_probs=168.2
Q ss_pred ehhhhcccCC-CCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 66 SDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~Ls~l~-HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
+|..++.+++ ||||+++++ ++.... .+|+|||| .||+|.+++.+ ..++.+.+++.+|+||+.||+|||++||+
T Consensus 68 rEi~~~~~~~~HpnI~~l~e-v~~t~~---~~~ivmEy~~gGdL~~~i~~-~g~l~E~~ar~~F~Qlisav~y~H~~gi~ 142 (370)
T KOG0583|consen 68 REISILRRLRSHPNIIRLLE-VFATPT---KIYIVMEYCSGGDLFDYIVN-KGRLKEDEARKYFRQLISAVAYCHSRGIV 142 (370)
T ss_pred HHHHHHHHhccCCCEeEEEE-EEecCC---eEEEEEEecCCccHHHHHHH-cCCCChHHHHHHHHHHHHHHHHHHhCCEe
Confidence 7888999999 999999999 666665 48999999 88999999976 44599999999999999999999999999
Q ss_pred eccCCCCcEEEccC-CceEEeccCcccCCC-CCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 144 VHNVRPSCFVMSSF-NHVSFIESASCSDSG-SDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 144 HrDLKP~NILl~~~-~~vkliDfg~a~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
||||||+|||++.+ +++||+|||++.... .+ ++
T Consensus 143 HRDLK~ENilld~~~~~~Kl~DFG~s~~~~~~~----------------------------------~~----------- 177 (370)
T KOG0583|consen 143 HRDLKPENILLDGNEGNLKLSDFGLSAISPGED----------------------------------GL----------- 177 (370)
T ss_pred eCCCCHHHEEecCCCCCEEEeccccccccCCCC----------------------------------Cc-----------
Confidence 99999999999998 999999999884331 11 00
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC-C-Cccccchhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-V-SCASDIYRLGV 299 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~-s~~sDIwSLGv 299 (720)
....+||+.|+|||++.+.. | +.++||||+||
T Consensus 178 ----------------------------------------------l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GV 211 (370)
T KOG0583|consen 178 ----------------------------------------------LKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGV 211 (370)
T ss_pred ----------------------------------------------ccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHH
Confidence 01158999999999999987 7 58999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhcCC--CCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCC
Q 004998 300 LLFELFC---PFSTGEEKTRTMSSLRHRV--LPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 366 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~~~--~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~ 366 (720)
+||.|++ ||...... .+...+..+. +|..+. .++..+|+.+||.+||.+|+|+.+|+.||||+.
T Consensus 212 iLy~ml~G~~PF~d~~~~-~l~~ki~~~~~~~p~~~~--S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~~~ 280 (370)
T KOG0583|consen 212 ILYVLLCGRLPFDDSNVP-NLYRKIRKGEFKIPSYLL--SPEARSLIEKMLVPDPSTRITLLEILEHPWFQK 280 (370)
T ss_pred HHHHHHhCCCCCCCccHH-HHHHHHhcCCccCCCCcC--CHHHHHHHHHHcCCCcccCCCHHHHhhChhhcc
Confidence 9999999 67664443 3444455432 333333 667779999999999999999999999999997
No 13
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=6e-37 Score=328.17 Aligned_cols=274 Identities=15% Similarity=0.178 Sum_probs=182.6
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|..+|...++|+||+||. .|++.. .+|||||| +||++..+|.+.+ .|++..++.|+.+++.|++.||+.|+||
T Consensus 190 aERdiL~~~ds~~vVKLyY-sFQD~~---~LYLiMEylPGGD~mTLL~~~~-~L~e~~arfYiaE~vlAI~~iH~~gyIH 264 (550)
T KOG0605|consen 190 AERDILAEVDSPWVVKLYY-SFQDKE---YLYLIMEYLPGGDMMTLLMRKD-TLTEDWARFYIAETVLAIESIHQLGYIH 264 (550)
T ss_pred HHHHHhhhcCCCcEEEEEE-EecCCC---eeEEEEEecCCccHHHHHHhcC-cCchHHHHHHHHHHHHHHHHHHHcCccc
Confidence 3444888899999999999 777776 67999999 9999999995554 4999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhh--hcccccccccccCCCCCCcc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRR--TRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r--~~~~l~Dfgla~~~~~~~~~ 222 (720)
|||||+|+||+..|++||.|||+|..+......+... .++.... ......||.-..+ .
T Consensus 265 RDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~------~ 324 (550)
T KOG0605|consen 265 RDIKPDNLLIDAKGHIKLSDFGLSTGLDKKHRIESYR--------------LDEQMQINLSEAKPSDFPKFNT------P 324 (550)
T ss_pred ccCChhheeecCCCCEeeccccccchhhhhhhhhhhc--------------chhhhhhhhccCCCcccccccc------c
Confidence 9999999999999999999999995432221110000 0000000 0000011100000 0
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
... . -....-.........-.-..+|||.|||||++.+..|+..+|+||||||+|
T Consensus 325 ~~~----------------------~---~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG~Imy 379 (550)
T KOG0605|consen 325 RST----------------------M---SRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLGCIMY 379 (550)
T ss_pred cch----------------------h---hHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHHHHHHH
Confidence 000 0 000000111111111112369999999999999999999999999999999
Q ss_pred hccccCCCC--chHHHHHHHhhcCC----CCccccccCchHHHHHHHcCCCCCCCCC---ChHHHHcCcccCCC-ccchH
Q 004998 303 ELFCPFSTG--EEKTRTMSSLRHRV----LPPQLLLKFPKEASFCLWLLHPEPSGRP---KMGELLQSEFLNEP-RDSME 372 (720)
Q Consensus 303 eLltpf~~~--~~~~~~~~~l~~~~----~p~~~~~~~p~~~~li~~~L~~dP~~Rp---ta~eiL~hp~~~~~-~~~l~ 372 (720)
|||.||+++ +....++..|.++. +|.. ....++..|||.+||. ||.+|. .+.||.+||||+.. ++.+-
T Consensus 380 EmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~-~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~HPfF~~v~W~~l~ 457 (550)
T KOG0605|consen 380 EMLVGYPPFCSETPQETYRKIVNWRETLKFPEE-VDLSDEAKDLITRLLC-DPENRLGSKGAEEIKKHPFFKGVDWDHLR 457 (550)
T ss_pred HHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCc-CcccHHHHHHHHHHhc-CHHHhcCcccHHHHhcCCccccCCcchhh
Confidence 999955443 33345565555432 3332 2333555699999999 999996 69999999999988 45444
Q ss_pred HHHHHHHHhhhhhHHHHHHHH
Q 004998 373 EREAAIELREQIDEEELLLEF 393 (720)
Q Consensus 373 e~~~~~~~~e~~~~~e~L~~f 393 (720)
+.. .++.++..+......|
T Consensus 458 ~~~--apfvP~v~~~~DT~yF 476 (550)
T KOG0605|consen 458 EMP--APFVPQVNSELDTQYF 476 (550)
T ss_pred cCC--CCCCCCCCCccccccc
Confidence 433 4444444443333333
No 14
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.6e-37 Score=316.07 Aligned_cols=226 Identities=18% Similarity=0.222 Sum_probs=172.9
Q ss_pred cceeeeehhhhcccCCCCCceecccceee-cCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 004998 60 FELRKHSDGVELTHGDHLRNQGGLSGVCE-NEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 60 ~~~r~~~e~~~Ls~l~HpnIV~l~~~~~~-~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
..-|..||..+|.+++|+||+.+++++-. ......-+|+|+|+++.+|.+.|+.. ..+++..+..+++||+.||.|+|
T Consensus 64 ~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~DvYiV~elMetDL~~iik~~-~~L~d~H~q~f~YQiLrgLKyiH 142 (359)
T KOG0660|consen 64 DAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDVYLVFELMETDLHQIIKSQ-QDLTDDHAQYFLYQILRGLKYIH 142 (359)
T ss_pred HHHHHHHHHHHHHHhcCCCcceEEeecccccccccceeEEehhHHhhHHHHHHHcC-ccccHHHHHHHHHHHHHhcchhh
Confidence 34477799999999999999999994443 23345569999999999999999554 44999999999999999999999
Q ss_pred HcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCC
Q 004998 139 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
+.||+||||||+|+|++.+..+|++|||+|+...... . .+|
T Consensus 143 SAnViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~~-~------------------------------~~~-------- 183 (359)
T KOG0660|consen 143 SANVIHRDLKPSNLLLNADCDLKICDFGLARYLDKFF-E------------------------------DGF-------- 183 (359)
T ss_pred cccccccccchhheeeccCCCEEeccccceeeccccC-c------------------------------ccc--------
Confidence 9999999999999999999999998888875432110 0 000
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-CCCccccchhh
Q 004998 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRL 297 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSL 297 (720)
-+.++.|.||+|||++... .|+.+.||||+
T Consensus 184 -------------------------------------------------mTeYVaTRWYRAPElll~~~~Yt~aiDiWSv 214 (359)
T KOG0660|consen 184 -------------------------------------------------MTEYVATRWYRAPELLLNSSEYTKAIDIWSV 214 (359)
T ss_pred -------------------------------------------------hhcceeeeeecCHHHHhccccccchhhhhhh
Confidence 1236889999999998654 49999999999
Q ss_pred hhhhhhccc--cCCCCchHHHHHH------------------------Hhhc-CCCC-----ccccccCchHHHHHHHcC
Q 004998 298 GVLLFELFC--PFSTGEEKTRTMS------------------------SLRH-RVLP-----PQLLLKFPKEASFCLWLL 345 (720)
Q Consensus 298 Gvll~eLlt--pf~~~~~~~~~~~------------------------~l~~-~~~p-----~~~~~~~p~~~~li~~~L 345 (720)
||||.||++ |..+.......+. .+.. ...| ..++...|...+|+.+||
T Consensus 215 GCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL 294 (359)
T KOG0660|consen 215 GCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKML 294 (359)
T ss_pred hHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHh
Confidence 999999999 4322211111111 1111 1111 123345566679999999
Q ss_pred CCCCCCCCChHHHHcCcccCCCccchHHH
Q 004998 346 HPEPSGRPKMGELLQSEFLNEPRDSMEER 374 (720)
Q Consensus 346 ~~dP~~Rpta~eiL~hp~~~~~~~~l~e~ 374 (720)
..||.+|+|++|+|+|||+....++-.|.
T Consensus 295 ~fdP~kRita~eAL~hPYl~~~hdp~dEP 323 (359)
T KOG0660|consen 295 VFDPKKRITAEEALAHPYLAPYHDPEDEP 323 (359)
T ss_pred ccCccccCCHHHHhcChhhhhhcCCccCC
Confidence 99999999999999999999998876664
No 15
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-36 Score=325.47 Aligned_cols=228 Identities=17% Similarity=0.241 Sum_probs=178.9
Q ss_pred CCCCccccccccccCCCCccceeeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCC
Q 004998 41 NPRLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVD 119 (720)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~ 119 (720)
+...++++++.+++-....-.| .|..+|...+|+|||.+++.+... ..+|+|||| .||+|.+.+.... ++
T Consensus 297 ~~~~VaiK~m~l~~Q~~keLil---nEi~Vm~~~~H~NiVnfl~Sylv~----deLWVVMEym~ggsLTDvVt~~~--~~ 367 (550)
T KOG0578|consen 297 TKQEVAIKRMDLRKQPKKELLL---NEILVMRDLHHPNIVNFLDSYLVG----DELWVVMEYMEGGSLTDVVTKTR--MT 367 (550)
T ss_pred CCceEEEEEEEeccCCchhhhH---HHHHHHHhccchHHHHHHHHhccc----ceeEEEEeecCCCchhhhhhccc--cc
Confidence 3444555665555443222111 788899999999999999954444 257999999 9999999885443 99
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhH
Q 004998 120 VYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDML 199 (720)
Q Consensus 120 ~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (720)
|.++..|+++++.||+|||.+||||||||.+|||+..+|.+||+|||+|..+....
T Consensus 368 E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~------------------------ 423 (550)
T KOG0578|consen 368 EGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQ------------------------ 423 (550)
T ss_pred HHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCCcEEEeeeeeeecccccc------------------------
Confidence 99999999999999999999999999999999999999999999999994431110
Q ss_pred hhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccC
Q 004998 200 QRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYAS 279 (720)
Q Consensus 200 ~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~A 279 (720)
.+....+|||+|||
T Consensus 424 ------------------------------------------------------------------~KR~TmVGTPYWMA 437 (550)
T KOG0578|consen 424 ------------------------------------------------------------------SKRSTMVGTPYWMA 437 (550)
T ss_pred ------------------------------------------------------------------CccccccCCCCccc
Confidence 01223699999999
Q ss_pred CccccCCCCCccccchhhhhhhhhccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCCh
Q 004998 280 PEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKM 355 (720)
Q Consensus 280 PE~l~~~~~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rpta 355 (720)
||++....|++++||||||+++.||+- ||....+..+.+....++.+.-..+... +...+|+.+||..||.+|++|
T Consensus 438 PEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~ng~P~lk~~~klS~~~kdFL~~cL~~dv~~RasA 517 (550)
T KOG0578|consen 438 PEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPKLKNPEKLSPELKDFLDRCLVVDVEQRASA 517 (550)
T ss_pred hhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhhcCCCCcCCccccCHHHHHHHHHHhhcchhcCCCH
Confidence 999999999999999999999999998 7777655544444433444433333333 455699999999999999999
Q ss_pred HHHHcCcccCCC
Q 004998 356 GELLQSEFLNEP 367 (720)
Q Consensus 356 ~eiL~hp~~~~~ 367 (720)
.|+|+||||+..
T Consensus 518 ~eLL~HpFl~~a 529 (550)
T KOG0578|consen 518 KELLEHPFLKMA 529 (550)
T ss_pred HHHhcChhhhhc
Confidence 999999999554
No 16
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.6e-36 Score=318.59 Aligned_cols=233 Identities=18% Similarity=0.232 Sum_probs=174.2
Q ss_pred CCccccccccccCCCCccceeeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHH
Q 004998 43 RLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYE 122 (720)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~ 122 (720)
..++-+|+.+...... +.+=..||+.||.+|+|||||+|.+.+... ....+|+|+||+..+|.-++..++-.|++.+
T Consensus 143 kivALKKvr~d~~~~~-~~~t~~REI~ILr~l~HpNIikL~eivt~~--~~~siYlVFeYMdhDL~GLl~~p~vkft~~q 219 (560)
T KOG0600|consen 143 KIVALKKVRFDNEKEG-FPITAIREIKILRRLDHPNIIKLEEIVTSK--LSGSIYLVFEYMDHDLSGLLSSPGVKFTEPQ 219 (560)
T ss_pred cEEEEEEeecccCCCc-chHHHHHHHHHHHhcCCCcccceeeEEEec--CCceEEEEEecccchhhhhhcCCCcccChHH
Confidence 3345555555443221 112233899999999999999999966655 1226899999999999999988777899999
Q ss_pred HHHHHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhh
Q 004998 123 CLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRR 202 (720)
Q Consensus 123 ~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r 202 (720)
++.|++||+.||+|||++||+|||||.+||||+.+|.+||+|||+|+.+.....
T Consensus 220 IKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~~-------------------------- 273 (560)
T KOG0600|consen 220 IKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSGS-------------------------- 273 (560)
T ss_pred HHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCCCEEeccccceeeccCCCC--------------------------
Confidence 999999999999999999999999999999999999999988777754322100
Q ss_pred hcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCcc
Q 004998 203 TRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEE 282 (720)
Q Consensus 203 ~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~ 282 (720)
.+ -+..+-|.||+|||+
T Consensus 274 -------------------------------------------------------------~~--~T~rVvTLWYRpPEL 290 (560)
T KOG0600|consen 274 -------------------------------------------------------------AP--YTSRVVTLWYRPPEL 290 (560)
T ss_pred -------------------------------------------------------------cc--cccceEEeeccChHH
Confidence 00 122577999999999
Q ss_pred ccCCC-CCccccchhhhhhhhhccc--c-CCCCchHHHHHHHhhc-CCCCccccc-------------------------
Q 004998 283 LAGAP-VSCASDIYRLGVLLFELFC--P-FSTGEEKTRTMSSLRH-RVLPPQLLL------------------------- 332 (720)
Q Consensus 283 l~~~~-~s~~sDIwSLGvll~eLlt--p-f~~~~~~~~~~~~l~~-~~~p~~~~~------------------------- 332 (720)
|.|.. |++++|+||.||||.||+. | |.+..+..+......- +.+.+..+.
T Consensus 291 LLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~~~~~kp~~~y~r~l~E~~~ 370 (560)
T KOG0600|consen 291 LLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPHATIFKPQQPYKRRLRETFK 370 (560)
T ss_pred hcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCCcccccCCCCcccchHHHHhc
Confidence 99987 9999999999999999999 4 4444444333322221 111111000
Q ss_pred cC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 333 KF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 333 ~~-p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
.. +...+|+..||..||.+|.||.++|+|+||...
T Consensus 371 ~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF~t~ 406 (560)
T KOG0600|consen 371 DFPASALDLLEKLLSLDPDKRGTASSALQSEYFTTE 406 (560)
T ss_pred cCCHHHHHHHHHHhccCccccccHHHHhcCcccccC
Confidence 11 223499999999999999999999999999554
No 17
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=8.6e-36 Score=290.16 Aligned_cols=208 Identities=19% Similarity=0.237 Sum_probs=166.5
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
..++|+.|-..|.|||||+|.+.+-+. ...|+|+|+ .|++|..-|-+. -.+++..+.++++||+++|+|+|.+|
T Consensus 56 ~l~rEarIC~~LqHP~IvrL~~ti~~~----~~~ylvFe~m~G~dl~~eIV~R-~~ySEa~aSH~~rQiLeal~yCH~n~ 130 (355)
T KOG0033|consen 56 KLEREARICRKLQHPNIVRLHDSIQEE----SFHYLVFDLVTGGELFEDIVAR-EFYSEADASHCIQQILEALAYCHSNG 130 (355)
T ss_pred HHHHHHHHHHhcCCCcEeehhhhhccc----ceeEEEEecccchHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 344888888899999999999933332 267999999 999998777333 23799999999999999999999999
Q ss_pred ceeccCCCCcEEEcc---CCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCC
Q 004998 142 IVVHNVRPSCFVMSS---FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 142 IvHrDLKP~NILl~~---~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
|||||+||+|+|+-+ ..-+||+|||++.+.+..
T Consensus 131 IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g-------------------------------------------- 166 (355)
T KOG0033|consen 131 IVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDG-------------------------------------------- 166 (355)
T ss_pred ceeccCChhheeeeeccCCCceeecccceEEEeCCc--------------------------------------------
Confidence 999999999999963 335889888888554311
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhh
Q 004998 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
... .| .+|||.|||||++...+|+..+|||+.|
T Consensus 167 ----------~~~------------------~G-------------------~~GtP~fmaPEvvrkdpy~kpvDiW~cG 199 (355)
T KOG0033|consen 167 ----------EAW------------------HG-------------------FAGTPGYLSPEVLKKDPYSKPVDIWACG 199 (355)
T ss_pred ----------ccc------------------cc-------------------ccCCCcccCHHHhhcCCCCCcchhhhhh
Confidence 000 11 5899999999999999999999999999
Q ss_pred hhhhhccc---cCCCCchHHHHHHHhhcCC--CCc-cccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 299 VLLFELFC---PFSTGEEKTRTMSSLRHRV--LPP-QLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~--~p~-~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|+||-||. ||.+... ...+..|..+. +|+ .+....|...+|+.+||..||.+|.|+.|+|+|||+.+.
T Consensus 200 ViLfiLL~G~~PF~~~~~-~rlye~I~~g~yd~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~HpWi~~r 273 (355)
T KOG0033|consen 200 VILYILLVGYPPFWDEDQ-HRLYEQIKAGAYDYPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALKHPWICNR 273 (355)
T ss_pred HHHHHHHhCCCCCCCccH-HHHHHHHhccccCCCCcccCcCCHHHHHHHHHHhccChhhhccHHHHhCCchhcch
Confidence 99999999 5655333 35666666543 333 455555666699999999999999999999999999985
No 18
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-36 Score=300.89 Aligned_cols=213 Identities=15% Similarity=0.220 Sum_probs=174.7
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|..+|..+.||.++++++ .+.+.. .+|+|||| +||.|..+|++.++ +++..++.|+.||+.||+|||+.+|++
T Consensus 93 nEk~vL~~v~~PFlv~l~~-t~~d~~---~lymvmeyv~GGElFS~Lrk~~r-F~e~~arFYAAeivlAleylH~~~iiY 167 (355)
T KOG0616|consen 93 NEKRVLKAVSHPFLVKLYG-TFKDNS---NLYMVMEYVPGGELFSYLRKSGR-FSEPHARFYAAEIVLALEYLHSLDIIY 167 (355)
T ss_pred hHHHHHhhccCceeEEEEE-eeccCC---eEEEEEeccCCccHHHHHHhcCC-CCchhHHHHHHHHHHHHHHHHhcCeee
Confidence 6778999999999999999 454443 68999999 99999999977655 999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+||||+.+|++||+|||+|+....
T Consensus 168 RDLKPENiLlD~~G~iKitDFGFAK~v~~--------------------------------------------------- 196 (355)
T KOG0616|consen 168 RDLKPENLLLDQNGHIKITDFGFAKRVSG--------------------------------------------------- 196 (355)
T ss_pred ccCChHHeeeccCCcEEEEeccceEEecC---------------------------------------------------
Confidence 99999999999999999998888732100
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhc
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 304 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eL 304 (720)
..-..+|||.|+|||++...+|..++|.|||||++|||
T Consensus 197 ------------------------------------------rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEM 234 (355)
T KOG0616|consen 197 ------------------------------------------RTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEM 234 (355)
T ss_pred ------------------------------------------cEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHH
Confidence 00126899999999999999999999999999999999
Q ss_pred cc---cCCCCchHHHHHHHhhcCC--CCccccccCchHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCC-ccchHH
Q 004998 305 FC---PFSTGEEKTRTMSSLRHRV--LPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP-RDSMEE 373 (720)
Q Consensus 305 lt---pf~~~~~~~~~~~~l~~~~--~p~~~~~~~p~~~~li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~-~~~l~e 373 (720)
+. ||...++ ..++..|..+. +|+.+ .+...+|+..+|+.|-.+|. ...+|..||||+.. +..+..
T Consensus 235 laG~pPF~~~~~-~~iY~KI~~~~v~fP~~f---s~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~wF~~v~W~~i~~ 310 (355)
T KOG0616|consen 235 LAGYPPFYDDNP-IQIYEKILEGKVKFPSYF---SSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHPWFKGVDWEAILQ 310 (355)
T ss_pred HcCCCCCcCCCh-HHHHHHHHhCcccCCccc---CHHHHHHHHHHHhhhhHhhhcCcCCCccccccCcccccccHHHHhh
Confidence 99 5665555 46666666543 44443 35667999999999999993 57899999999986 445555
Q ss_pred HHHHHHH
Q 004998 374 REAAIEL 380 (720)
Q Consensus 374 ~~~~~~~ 380 (720)
++-..++
T Consensus 311 r~ie~P~ 317 (355)
T KOG0616|consen 311 RKIEPPF 317 (355)
T ss_pred ccccCCC
Confidence 4443343
No 19
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=4.9e-36 Score=308.91 Aligned_cols=226 Identities=19% Similarity=0.270 Sum_probs=180.1
Q ss_pred CCccccccccccCCCCccceeeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHH
Q 004998 43 RLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVY 121 (720)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~ 121 (720)
+.++++-|.-..-.+.....+..||+.|++.|+||||+++|. +|+..+ .+.||||| .+|.|.+|+...+ .|++.
T Consensus 79 R~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyE-VFENkd---KIvivMEYaS~GeLYDYiSer~-~LsEr 153 (668)
T KOG0611|consen 79 REVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYE-VFENKD---KIVIVMEYASGGELYDYISERG-SLSER 153 (668)
T ss_pred cEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhh-hhcCCc---eEEEEEEecCCccHHHHHHHhc-cccHH
Confidence 334444444333344445556668888999999999999999 666655 57999999 9999999995554 49999
Q ss_pred HHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhh
Q 004998 122 ECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQR 201 (720)
Q Consensus 122 ~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (720)
+++++|+||+.||.|+|.++|+|||||.+|||++.++++||+|||++-.+...
T Consensus 154 EaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~NiKIADFGLSNly~~~--------------------------- 206 (668)
T KOG0611|consen 154 EARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNNNIKIADFGLSNLYADK--------------------------- 206 (668)
T ss_pred HHHHHHHHHHHHHHHHhhccceecccchhheeecCCCCeeeeccchhhhhccc---------------------------
Confidence 99999999999999999999999999999999999999999988887322111
Q ss_pred hhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCc
Q 004998 202 RTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPE 281 (720)
Q Consensus 202 r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE 281 (720)
.| -..++|+|-|.+||
T Consensus 207 -------kf---------------------------------------------------------LqTFCGSPLYASPE 222 (668)
T KOG0611|consen 207 -------KF---------------------------------------------------------LQTFCGSPLYASPE 222 (668)
T ss_pred -------cH---------------------------------------------------------HHHhcCCcccCCcc
Confidence 01 01258999999999
Q ss_pred cccCCCC-Cccccchhhhhhhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHH
Q 004998 282 ELAGAPV-SCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGE 357 (720)
Q Consensus 282 ~l~~~~~-s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~e 357 (720)
+++|.+| ++.+|-|||||+||.|+. ||++.+.. .+...|..+.+.... .-++...||+|||..||.+|.|+.+
T Consensus 223 IvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk-~lvrQIs~GaYrEP~--~PSdA~gLIRwmLmVNP~RRATieD 299 (668)
T KOG0611|consen 223 IVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHK-RLVRQISRGAYREPE--TPSDASGLIRWMLMVNPERRATIED 299 (668)
T ss_pred ccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHH-HHHHHhhcccccCCC--CCchHHHHHHHHHhcCcccchhHHH
Confidence 9999997 799999999999999998 89887665 555666665543321 1244569999999999999999999
Q ss_pred HHcCcccCCC
Q 004998 358 LLQSEFLNEP 367 (720)
Q Consensus 358 iL~hp~~~~~ 367 (720)
|..|=|++-.
T Consensus 300 iAsHWWvNwg 309 (668)
T KOG0611|consen 300 IASHWWVNWG 309 (668)
T ss_pred Hhhhheeecc
Confidence 9999888743
No 20
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=6.4e-36 Score=311.15 Aligned_cols=213 Identities=16% Similarity=0.254 Sum_probs=164.5
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
+.|+.+|+.++|||||++++ ++++++ .+|+|||| .||+|.+||++.++ +++..++.++.||+.||++||+++||
T Consensus 57 ~~Ei~iLkel~H~nIV~l~d-~~~~~~---~i~lVMEyC~gGDLs~yi~~~~~-l~e~t~r~Fm~QLA~alq~L~~~~Ii 131 (429)
T KOG0595|consen 57 LSEIKILKELKHPNIVRLLD-CIEDDD---FIYLVMEYCNGGDLSDYIRRRGR-LPEATARHFMQQLASALQFLHENNII 131 (429)
T ss_pred HHHHHHHHhcCCcceeeEEE-EEecCC---eEEEEEEeCCCCCHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 48899999999999999999 666665 68999999 89999999976654 99999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||.||||+........ ..+|++|||+|+......
T Consensus 132 HRDLKPQNiLLs~~~~~~~~---------------------------------------~~LKIADFGfAR~L~~~~--- 169 (429)
T KOG0595|consen 132 HRDLKPQNILLSTTARNDTS---------------------------------------PVLKIADFGFARFLQPGS--- 169 (429)
T ss_pred eccCCcceEEeccCCCCCCC---------------------------------------ceEEecccchhhhCCchh---
Confidence 99999999999864110000 123445666555433210
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
-....+|+|.|||||+++...|+.++|+||+|+|||+
T Consensus 170 -------------------------------------------~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq 206 (429)
T KOG0595|consen 170 -------------------------------------------MAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQ 206 (429)
T ss_pred -------------------------------------------HHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHH
Confidence 0012689999999999999999999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhc-CCCCccccc-cCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004998 304 LFC---PFSTGEEKTRTMSSLRH-RVLPPQLLL-KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~-~~~p~~~~~-~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
|++ ||...... +....+.. ....+.+.. ..+...+|+..+|..+|.+|.+..+.+.|+++....
T Consensus 207 ~l~g~~Pf~a~t~~-eL~~~~~k~~~~~~~~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~~~~~~l~~~p 275 (429)
T KOG0595|consen 207 CLTGKPPFDAETPK-ELLLYIKKGNEIVPVLPAELSNPLRELLISLLQRNPKDRISFEDFFDHPFLAANP 275 (429)
T ss_pred HHhCCCCccccCHH-HHHHHHhccccccCchhhhccCchhhhhhHHHhcCccccCchHHhhhhhhcccCc
Confidence 999 56554443 33334443 223333333 334445999999999999999999999999998763
No 21
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=4.5e-35 Score=304.79 Aligned_cols=272 Identities=15% Similarity=0.160 Sum_probs=185.6
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHH-hCCCCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWL-DKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L-~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
|...|..||+.++||.++.||. .++.+. ..|++||| .||+|...+ +++++.+++..++.|+..|+.||+|||-.
T Consensus 123 Ra~tE~eIL~~lDHPFlPTLYa-~fet~~---~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHml 198 (459)
T KOG0610|consen 123 RAQTEREILSLLDHPFLPTLYA-SFETDK---YSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHML 198 (459)
T ss_pred HHHHHHHHHHhcCCCccchhhh-eeeccc---eeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhh
Confidence 6678899999999999999999 665554 67999999 999999988 56677799999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeccCcccCCCC-CCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004998 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGS-DSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
|||.|||||+||||.++|+|.|+||.++..... +.+- ...+..+.............-|.+.......
T Consensus 199 GivYRDLKPENILvredGHIMLsDFDLS~~~~~~Pt~~-----------~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~ 267 (459)
T KOG0610|consen 199 GIVYRDLKPENILVREDGHIMLSDFDLSLRCPVSPTLV-----------KSSSPRSSGSQPSCRSRQPSCFSPRCLSSSK 267 (459)
T ss_pred ceeeccCCcceeEEecCCcEEeeeccccccCCCCCeee-----------ccCCCCCCCCCcccccccccccccchhcccc
Confidence 999999999999999999999999999854311 1000 0000000000000000000111100000000
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhh
Q 004998 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
... . ...... +...+... .....+....+||-.|+|||++.|...+.++|+|+|||
T Consensus 268 ~~~------------------k--~~~~~~-~~~p~~~a---ep~~~RSnSFVGThEYlAPEvI~G~GHgsAVDWWtfGI 323 (459)
T KOG0610|consen 268 KRK------------------K--KDESAS-RSLPELVA---EPTGARSNSFVGTHEYLAPEVIRGEGHGSAVDWWTFGI 323 (459)
T ss_pred ccc------------------c--cccccc-ccchhhhc---CCCCccccccccccccccceeeecCCCCchhhHHHHHH
Confidence 000 0 000000 00011100 11112334589999999999999999999999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCC----hHHHHcCcccCCCccchH
Q 004998 300 LLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK----MGELLQSEFLNEPRDSME 372 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpt----a~eiL~hp~~~~~~~~l~ 372 (720)
+|||||. ||.+.+........+.+...-|..+.......|||+++|.+||++|.. |.||.+||||.+..-.+.
T Consensus 324 flYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~HpFF~gVnWaLi 403 (459)
T KOG0610|consen 324 FLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPEEPEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKRHPFFEGVNWALI 403 (459)
T ss_pred HHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCCCCcchhHHHHHHHHHhccChhhhhccccchHHhhcCccccCCChhhe
Confidence 9999997 999887775555555443322332233345559999999999999987 999999999999865544
Q ss_pred H
Q 004998 373 E 373 (720)
Q Consensus 373 e 373 (720)
.
T Consensus 404 r 404 (459)
T KOG0610|consen 404 R 404 (459)
T ss_pred e
Confidence 3
No 22
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=2e-35 Score=299.35 Aligned_cols=235 Identities=18% Similarity=0.229 Sum_probs=180.2
Q ss_pred CCCCCccccccccccCCCCccce--eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCC
Q 004998 40 RNPRLLRGERFGVRGDDSNDFEL--RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRS 117 (720)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~--r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~ 117 (720)
++.+-++-+|+....+ ...| -.-||+.+|.+++|||||.+-.++.. .+...+|+||||...+|..+|..-..+
T Consensus 99 ~t~eIVALKr~kmeke---k~GFPItsLREIniLl~~~H~NIV~vkEVVvG--~~~d~iy~VMe~~EhDLksl~d~m~q~ 173 (419)
T KOG0663|consen 99 KTDEIVALKRLKMEKE---KEGFPITSLREINILLKARHPNIVEVKEVVVG--SNMDKIYIVMEYVEHDLKSLMETMKQP 173 (419)
T ss_pred CcceeEEeeecccccc---cCCCcchhHHHHHHHHhcCCCCeeeeEEEEec--cccceeeeeHHHHHhhHHHHHHhccCC
Confidence 4444455555555442 2333 23388999999999999999995543 334469999999889999999777778
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchh
Q 004998 118 VDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLD 197 (720)
Q Consensus 118 l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (720)
+...+++.++.|++.||.|||.+.|+||||||+|+|++..|.+|++|||+|+.+|.+..
T Consensus 174 F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~k--------------------- 232 (419)
T KOG0663|consen 174 FLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKGILKIADFGLAREYGSPLK--------------------- 232 (419)
T ss_pred CchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCCcEEecccchhhhhcCCcc---------------------
Confidence 99999999999999999999999999999999999999999999999999987766510
Q ss_pred hHhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcc
Q 004998 198 MLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWY 277 (720)
Q Consensus 198 ~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y 277 (720)
.-+..+-|.||
T Consensus 233 ---------------------------------------------------------------------~~T~lVVTLWY 243 (419)
T KOG0663|consen 233 ---------------------------------------------------------------------PYTPLVVTLWY 243 (419)
T ss_pred ---------------------------------------------------------------------cCcceEEEeee
Confidence 01235779999
Q ss_pred cCCccccCCC-CCccccchhhhhhhhhccc--c-CCCCchHHHHHHHhhc------CCCC--------------cc----
Q 004998 278 ASPEELAGAP-VSCASDIYRLGVLLFELFC--P-FSTGEEKTRTMSSLRH------RVLP--------------PQ---- 329 (720)
Q Consensus 278 ~APE~l~~~~-~s~~sDIwSLGvll~eLlt--p-f~~~~~~~~~~~~l~~------~~~p--------------~~---- 329 (720)
+|||++.|.. |++++|+||+|||+.||++ | |++..+..+....+.- .+.| ..
T Consensus 244 RaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp~~k~~~f~~~pyn~ 323 (419)
T KOG0663|consen 244 RAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPAVKKMTFSEHPYNN 323 (419)
T ss_pred cCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccccchhhccccCCCCchh
Confidence 9999999987 9999999999999999999 5 4444444333333221 1111 00
Q ss_pred ----cccc-C-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004998 330 ----LLLK-F-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 330 ----~~~~-~-p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
+... . ....+|+..+|.+||.+|.||.|.|+|+||.+...
T Consensus 324 lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e~P~ 369 (419)
T KOG0663|consen 324 LRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRETPL 369 (419)
T ss_pred hhhhccccccchhHHHHHHHHhccCccccccHHHhhcccccccCCC
Confidence 1001 1 12248999999999999999999999999998644
No 23
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=2.7e-35 Score=290.52 Aligned_cols=234 Identities=15% Similarity=0.206 Sum_probs=180.4
Q ss_pred CCCCccccccccccCCCCccceeeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCH
Q 004998 41 NPRLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDV 120 (720)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~ 120 (720)
+.+.++.++|... .....-.+-.-||+..|..++||||+.+.+ +|.... .+-+|+||...+|...|+.....++.
T Consensus 26 t~~~VAIKKIkl~-~~kdGi~~talREIK~Lqel~h~nIi~LiD-~F~~~~---~l~lVfEfm~tdLe~vIkd~~i~l~p 100 (318)
T KOG0659|consen 26 TGKRVAIKKIKLG-NAKDGINRTALREIKLLQELKHPNIIELID-VFPHKS---NLSLVFEFMPTDLEVVIKDKNIILSP 100 (318)
T ss_pred CCcEEEEEEeecc-ccccCccHHHHHHHHHHHHccCcchhhhhh-hccCCC---ceEEEEEeccccHHHHhcccccccCH
Confidence 4444566666554 222222334448899999999999999999 444433 46899999999999999888888999
Q ss_pred HHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHh
Q 004998 121 YECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQ 200 (720)
Q Consensus 121 ~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (720)
.+++.|+.+++.||+|||++.|+||||||.|+||+++|.+|++|||+++.+|.+...
T Consensus 101 a~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~----------------------- 157 (318)
T KOG0659|consen 101 ADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRI----------------------- 157 (318)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCcEEeecccchhccCCCCcc-----------------------
Confidence 999999999999999999999999999999999999999999999999777655211
Q ss_pred hhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCC
Q 004998 201 RRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASP 280 (720)
Q Consensus 201 ~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~AP 280 (720)
.+..+-|.||+||
T Consensus 158 -------------------------------------------------------------------~~~~V~TRWYRAP 170 (318)
T KOG0659|consen 158 -------------------------------------------------------------------QTHQVVTRWYRAP 170 (318)
T ss_pred -------------------------------------------------------------------cccceeeeeccCh
Confidence 0113569999999
Q ss_pred ccccCCC-CCccccchhhhhhhhhccc--cCCCCchHHHHHHHh-hc-CC--------------------CCcc-----c
Q 004998 281 EELAGAP-VSCASDIYRLGVLLFELFC--PFSTGEEKTRTMSSL-RH-RV--------------------LPPQ-----L 330 (720)
Q Consensus 281 E~l~~~~-~s~~sDIwSLGvll~eLlt--pf~~~~~~~~~~~~l-~~-~~--------------------~p~~-----~ 330 (720)
|.+.|.. |+..+||||.|||+.||+- ||.+.+...+.+..+ +. +. +|.. +
T Consensus 171 ELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~~~P~~~~~~lf 250 (318)
T KOG0659|consen 171 ELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQQFPKPPLNNLF 250 (318)
T ss_pred HHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHHhcCCCCcccccc
Confidence 9999987 9999999999999999998 876654433333222 21 10 1111 1
Q ss_pred cccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004998 331 LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 331 ~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
....++..||+..||.+||.+|+|+.|+|+|+||+....
T Consensus 251 ~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~~P~ 289 (318)
T KOG0659|consen 251 PAASSDALDLLSKMLTYNPKKRITASQALKHPYFKSLPL 289 (318)
T ss_pred ccccHHHHHHHHhhhccCchhcccHHHHhcchhhhcCCC
Confidence 122234459999999999999999999999999997533
No 24
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-34 Score=312.50 Aligned_cols=207 Identities=19% Similarity=0.232 Sum_probs=165.5
Q ss_pred ceeeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHH
Q 004998 61 ELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 61 ~~r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
.....+|..+|++++|||||+++| ++..... .+++|||| .+|+|.++|.+ ..+.++...+..|+.||+.|+.|||
T Consensus 83 ~~~f~~E~~il~~l~HpNIV~f~G-~~~~~~~--~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH 159 (362)
T KOG0192|consen 83 RKAFRREASLLSRLRHPNIVQFYG-ACTSPPG--SLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLH 159 (362)
T ss_pred HHHHHHHHHHHHhCCCCCeeeEEE-EEcCCCC--ceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHh
Confidence 334558888999999999999999 5555432 47999999 99999999965 4667999999999999999999999
Q ss_pred HcC-ceeccCCCCcEEEccCC-ceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCC
Q 004998 139 SQG-IVVHNVRPSCFVMSSFN-HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 216 (720)
Q Consensus 139 s~g-IvHrDLKP~NILl~~~~-~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~ 216 (720)
+++ ||||||||+|||++.++ ++||+|||+++......
T Consensus 160 ~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~----------------------------------------- 198 (362)
T KOG0192|consen 160 SEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK----------------------------------------- 198 (362)
T ss_pred cCCCeeecccChhhEEEcCCCCEEEECCCccceeecccc-----------------------------------------
Confidence 999 99999999999999997 99998888774321100
Q ss_pred CCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCcccc--CCCCCccccc
Q 004998 217 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA--GAPVSCASDI 294 (720)
Q Consensus 217 ~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~--~~~~s~~sDI 294 (720)
...+...||+.|||||++. ...|+.++||
T Consensus 199 -------------------------------------------------~~~~~~~GT~~wMAPEv~~~~~~~~~~K~Dv 229 (362)
T KOG0192|consen 199 -------------------------------------------------TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDV 229 (362)
T ss_pred -------------------------------------------------ccccCCCCCccccChhhhcCCCCcCCccchh
Confidence 0001146899999999999 5579999999
Q ss_pred hhhhhhhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 295 YRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 295 wSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||||+||||+| ||........+.....++..|+......+....|+.+||+.||..||+..+|+.
T Consensus 230 ySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~~~Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~ 298 (362)
T KOG0192|consen 230 YSFGIVLWELLTGEIPFEDLAPVQVASAVVVGGLRPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVS 298 (362)
T ss_pred hhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHH
Confidence 999999999999 898887743344444344444433334455569999999999999999999874
No 25
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=9.9e-35 Score=305.91 Aligned_cols=216 Identities=19% Similarity=0.234 Sum_probs=168.7
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|+.+|+++.|||||+|++ +. ++.....+|||+|| ..|.+. |.......+++.+++.|+++++.||+|||.||||
T Consensus 156 ~~EIailKkl~H~nVV~LiE-vL-DDP~s~~~YlVley~s~G~v~-w~p~d~~els~~~Ar~ylrDvv~GLEYLH~Qgii 232 (576)
T KOG0585|consen 156 RREIAILKKLHHPNVVKLIE-VL-DDPESDKLYLVLEYCSKGEVK-WCPPDKPELSEQQARKYLRDVVLGLEYLHYQGII 232 (576)
T ss_pred HHHHHHHHhcCCcCeeEEEE-ee-cCcccCceEEEEEeccCCccc-cCCCCcccccHHHHHHHHHHHHHHHHHHHhcCee
Confidence 38999999999999999999 44 55556689999999 666653 3422222389999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|+||+++|+|||.|||.+..+.....+ ++
T Consensus 233 HRDIKPsNLLl~~~g~VKIsDFGVs~~~~~~~~~-------------------------------~~------------- 268 (576)
T KOG0585|consen 233 HRDIKPSNLLLSSDGTVKISDFGVSNEFPQGSDE-------------------------------GS------------- 268 (576)
T ss_pred ccccchhheEEcCCCcEEeeccceeeecccCCcc-------------------------------cc-------------
Confidence 9999999999999999999999998543111000 00
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC----CCccccchhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP----VSCASDIYRLGV 299 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~----~s~~sDIwSLGv 299 (720)
. . .-...+|||.|+|||.+.+.. .+.+.|||||||
T Consensus 269 -d-------------------~---------------------~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGV 307 (576)
T KOG0585|consen 269 -D-------------------D---------------------QLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGV 307 (576)
T ss_pred -H-------------------H---------------------HHhhcCCCccccchHhhcCCCCccccchhhhhhhhhh
Confidence 0 0 000148999999999998733 478999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhc-CCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004998 300 LLFELFC---PFSTGEEKTRTMSSLRH-RVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~-~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
+||-|+. ||...... ..+..|.+ ...-|......+...+||++||.+||.+|.++.+|..|||.....+
T Consensus 308 TLYCllfG~~PF~~~~~~-~l~~KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~g~ 380 (576)
T KOG0585|consen 308 TLYCLLFGQLPFFDDFEL-ELFDKIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRDGD 380 (576)
T ss_pred hHHHhhhccCCcccchHH-HHHHHHhcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhheecceeccCCC
Confidence 9999998 88887666 44444444 3334444445666679999999999999999999999999998733
No 26
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.9e-35 Score=289.38 Aligned_cols=231 Identities=16% Similarity=0.153 Sum_probs=176.2
Q ss_pred CCCCccccccccccCCCCccc---eeee--ehhhhccc-CCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC
Q 004998 41 NPRLLRGERFGVRGDDSNDFE---LRKH--SDGVELTH-GDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK 113 (720)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~---~r~~--~e~~~Ls~-l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~ 113 (720)
+....+++.+...+.+..... .|++ +|..||.+ ..||+|+.+.+ +|+.+. .+++|+|+ ..|.|.++|..
T Consensus 41 t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D-~yes~s---F~FlVFdl~prGELFDyLts 116 (411)
T KOG0599|consen 41 TGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQD-VYESDA---FVFLVFDLMPRGELFDYLTS 116 (411)
T ss_pred cccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeee-eccCcc---hhhhhhhhcccchHHHHhhh
Confidence 444455555555544443322 3444 67778888 67999999999 777765 57999999 89999999954
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCC
Q 004998 114 PKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSP 193 (720)
Q Consensus 114 ~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~ 193 (720)
. -.+++.+.+.|++||++|+.|||.++||||||||+|||++++.+++|.|||+++.....+
T Consensus 117 ~-VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn~~i~isDFGFa~~l~~Ge------------------ 177 (411)
T KOG0599|consen 117 K-VTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDNMNIKISDFGFACQLEPGE------------------ 177 (411)
T ss_pred h-eeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeeccccceEEeccceeeccCCch------------------
Confidence 4 349999999999999999999999999999999999999999999999999885432110
Q ss_pred CchhhHhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCcccccccc
Q 004998 194 LPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLME 273 (720)
Q Consensus 194 ~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~G 273 (720)
+-...+|
T Consensus 178 -------------------------------------------------------------------------kLrelCG 184 (411)
T KOG0599|consen 178 -------------------------------------------------------------------------KLRELCG 184 (411)
T ss_pred -------------------------------------------------------------------------hHHHhcC
Confidence 1123689
Q ss_pred CCcccCCccccC------CCCCccccchhhhhhhhhccccCCCCchHH--HHHHHhhcCCC---CccccccCchHHHHHH
Q 004998 274 TNWYASPEELAG------APVSCASDIYRLGVLLFELFCPFSTGEEKT--RTMSSLRHRVL---PPQLLLKFPKEASFCL 342 (720)
Q Consensus 274 T~~Y~APE~l~~------~~~s~~sDIwSLGvll~eLltpf~~~~~~~--~~~~~l~~~~~---p~~~~~~~p~~~~li~ 342 (720)
||+|+|||.+.. ..|+..+|+|++|||||.||.+.+++-... .+...|..+.+ .|.+........+||.
T Consensus 185 TPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGkyqF~speWadis~~~KdLIs 264 (411)
T KOG0599|consen 185 TPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKYQFRSPEWADISATVKDLIS 264 (411)
T ss_pred CCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhcccccCCcchhhccccHHHHHH
Confidence 999999999843 238999999999999999999555543322 22333444432 3444444455569999
Q ss_pred HcCCCCCCCCCChHHHHcCcccCCC
Q 004998 343 WLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 343 ~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
+||+.||.+|.|++|+|+||||.+.
T Consensus 265 rlLqVdp~~Ritake~LaHpff~q~ 289 (411)
T KOG0599|consen 265 RLLQVDPTKRITAKEALAHPFFIQI 289 (411)
T ss_pred HHHeeCchhcccHHHHhcChHHHHH
Confidence 9999999999999999999999764
No 27
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=1.9e-34 Score=331.73 Aligned_cols=264 Identities=23% Similarity=0.313 Sum_probs=200.9
Q ss_pred CcccccccccC-------CCCCCccccccccccCCCCccceeeeehhhhcccCCCCCceecccceeecCC----------
Q 004998 29 SRALNISGVSD-------RNPRLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEA---------- 91 (720)
Q Consensus 29 ~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~---------- 91 (720)
...||.|+|+. -+.+..+++||...+ +.....+..+|+.+|++|+|||||+||..|.+...
T Consensus 484 L~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~--s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~ei~~~ 561 (1351)
T KOG1035|consen 484 LELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA--SDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVLEIVAS 561 (1351)
T ss_pred HHHhcCCCCceEEEEeecccchhhhhhhccCch--HHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcccccccccc
Confidence 34667777776 455677888888877 33333455589999999999999999986654100
Q ss_pred --------------------------------------------------------------------------------
Q 004998 92 -------------------------------------------------------------------------------- 91 (720)
Q Consensus 92 -------------------------------------------------------------------------------- 91 (720)
T Consensus 562 ~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~e~~~~ 641 (1351)
T KOG1035|consen 562 DSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDSEGSVI 641 (1351)
T ss_pred chhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccccCCccc
Confidence
Q ss_pred -------------------------CCCcEEEEEecCCCCHHHHH-hCCCCCCCHHHHHHHHHHHHHHHHHHHHcCceec
Q 004998 92 -------------------------AIDPFVHAIEWGDVSLRQWL-DKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 145 (720)
Q Consensus 92 -------------------------~~~~~~lv~E~~ggsL~~~L-~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHr 145 (720)
....+||-|||+.-+|.+++ +.+...-.....+++|+||++||.|+|++|||||
T Consensus 642 ~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~~giIHR 721 (1351)
T KOG1035|consen 642 LDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHDQGIIHR 721 (1351)
T ss_pred cCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHhCceeec
Confidence 00236999999555555555 4333211578999999999999999999999999
Q ss_pred cCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccccc
Q 004998 146 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 225 (720)
Q Consensus 146 DLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~ 225 (720)
||||.||+|+++++|||.|||++...-.. .+++.+... ...
T Consensus 722 DLKP~NIFLd~~~~VKIGDFGLAt~~~~~---------------------------------~~~~d~~~~-----~~~- 762 (1351)
T KOG1035|consen 722 DLKPRNIFLDSRNSVKIGDFGLATDLKEN---------------------------------LESIDQDLS-----FST- 762 (1351)
T ss_pred cCCcceeEEcCCCCeeecccccchhhhhh---------------------------------hhhHhhccC-----ccc-
Confidence 99999999999999999999988542100 000000000 000
Q ss_pred ccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC---CCccccchhhhhhhh
Q 004998 226 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP---VSCASDIYRLGVLLF 302 (720)
Q Consensus 226 ~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~---~s~~sDIwSLGvll~ 302 (720)
..........+..+||.-|+|||++.+.. |+.++|||||||+||
T Consensus 763 ---------------------------------~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIVlF 809 (1351)
T KOG1035|consen 763 ---------------------------------NRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYNSKIDMYSLGIVLF 809 (1351)
T ss_pred ---------------------------------cccCCCCcccccccceeeeecHHHhcccccccccchhhhHHHHHHHH
Confidence 00000011224479999999999997765 999999999999999
Q ss_pred hccccCCCCchHHHHHHHhhcCCCCcc---ccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCC
Q 004998 303 ELFCPFSTGEEKTRTMSSLRHRVLPPQ---LLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 366 (720)
Q Consensus 303 eLltpf~~~~~~~~~~~~l~~~~~p~~---~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~ 366 (720)
||+.||.+..+...++..++.+.+|.. +.+..|.++.+|.|||..||.+||||.|+|++.||..
T Consensus 810 EM~yPF~TsMERa~iL~~LR~g~iP~~~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~s~llpp 876 (1351)
T KOG1035|consen 810 EMLYPFGTSMERASILTNLRKGSIPEPADFFDPEHPEEASLIRWLLSHDPSKRPTATELLNSELLPP 876 (1351)
T ss_pred HHhccCCchHHHHHHHHhcccCCCCCCcccccccchHHHHHHHHHhcCCCccCCCHHHHhhccCCCc
Confidence 999999999999999999999999888 7888899999999999999999999999999999986
No 28
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=6.7e-34 Score=293.76 Aligned_cols=239 Identities=18% Similarity=0.237 Sum_probs=176.7
Q ss_pred CCccccccccccCCCCccceeeeehhhhcccCCCCC-ceecccceeecCC--CCCcEEEEEecCCCCHHHHHhCCC---C
Q 004998 43 RLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLR-NQGGLSGVCENEA--AIDPFVHAIEWGDVSLRQWLDKPK---R 116 (720)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~r~~~e~~~Ls~l~Hpn-IV~l~~~~~~~~~--~~~~~~lv~E~~ggsL~~~L~~~~---~ 116 (720)
..++.+++.+..+. +..-.-..||+-+|.+++|+| ||.+++++..... ....+++|+||...+|..++.... .
T Consensus 37 ~~VALKkirl~~~~-EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~l~lvfe~~d~DL~~ymd~~~~~~~ 115 (323)
T KOG0594|consen 37 KFVALKKIRLEFEE-EGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGKLYLVFEFLDRDLKKYMDSLPKKPQ 115 (323)
T ss_pred CEEEEEEEeccccc-cCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccceEEEEEEeecccHHHHHHhcccccc
Confidence 34455555554332 111112237888999999999 9999994443331 233579999999899999996544 3
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCch
Q 004998 117 SVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPL 196 (720)
Q Consensus 117 ~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 196 (720)
.++...++.+++||+.||+|||++||+||||||.||||+++|.+||+|||+++.++.+.-
T Consensus 116 g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlAra~~ip~~-------------------- 175 (323)
T KOG0594|consen 116 GLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSGVLKLADFGLARAFSIPMR-------------------- 175 (323)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCCcEeeeccchHHHhcCCcc--------------------
Confidence 588899999999999999999999999999999999999999999999998865433210
Q ss_pred hhHhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCc
Q 004998 197 DMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNW 276 (720)
Q Consensus 197 ~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~ 276 (720)
.-+..++|.|
T Consensus 176 ----------------------------------------------------------------------~yt~evvTlW 185 (323)
T KOG0594|consen 176 ----------------------------------------------------------------------TYTPEVVTLW 185 (323)
T ss_pred ----------------------------------------------------------------------cccccEEEee
Confidence 0122578999
Q ss_pred ccCCccccCCC-CCccccchhhhhhhhhccc--c-CCCCchHHHHHHHhhcCCCC-------------------cc----
Q 004998 277 YASPEELAGAP-VSCASDIYRLGVLLFELFC--P-FSTGEEKTRTMSSLRHRVLP-------------------PQ---- 329 (720)
Q Consensus 277 Y~APE~l~~~~-~s~~sDIwSLGvll~eLlt--p-f~~~~~~~~~~~~l~~~~~p-------------------~~---- 329 (720)
|+|||++.|.. |++.+||||+|||++||++ | |++..+........+.--.| ..
T Consensus 186 YRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~ 265 (323)
T KOG0594|consen 186 YRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGVSSLPDYKAPFPKWPGPK 265 (323)
T ss_pred ccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCccccccccccCcCCCCcc
Confidence 99999999985 9999999999999999999 4 55555544433333321111 00
Q ss_pred -c----cccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCccchH
Q 004998 330 -L----LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSME 372 (720)
Q Consensus 330 -~----~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~~l~ 372 (720)
+ ....+...+++.+||+++|.+|.|+..+|.||||........
T Consensus 266 ~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~~~~~~ 313 (323)
T KOG0594|consen 266 DLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSELPEKSS 313 (323)
T ss_pred chHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhcccccchh
Confidence 0 011134459999999999999999999999999998855433
No 29
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-34 Score=308.52 Aligned_cols=231 Identities=17% Similarity=0.175 Sum_probs=192.0
Q ss_pred CCCCCccccccccccCCCCccceeeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCC
Q 004998 40 RNPRLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVD 119 (720)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~ 119 (720)
+|...+++++..++|.-+....--...|+.+|.+++|||+|.+-+ +|..+. ..|+||||+-|+-.|+|.-...++.
T Consensus 49 ~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkg-CyLre~---TaWLVMEYClGSAsDlleVhkKplq 124 (948)
T KOG0577|consen 49 RNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKG-CYLREH---TAWLVMEYCLGSASDLLEVHKKPLQ 124 (948)
T ss_pred CccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccc-eeeccc---hHHHHHHHHhccHHHHHHHHhccch
Confidence 788888999999999887766666668888999999999999999 665553 4699999988899998866666799
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhH
Q 004998 120 VYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDML 199 (720)
Q Consensus 120 ~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (720)
+.++..|..+.+.||.|||+.+.||||||..|||+++.|.|||.|||.++....
T Consensus 125 EvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~P-------------------------- 178 (948)
T KOG0577|consen 125 EVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPGLVKLADFGSASIMAP-------------------------- 178 (948)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCCeeeeccccchhhcCc--------------------------
Confidence 999999999999999999999999999999999999999999999988733210
Q ss_pred hhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccC
Q 004998 200 QRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYAS 279 (720)
Q Consensus 200 ~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~A 279 (720)
...++|||+|||
T Consensus 179 --------------------------------------------------------------------AnsFvGTPywMA 190 (948)
T KOG0577|consen 179 --------------------------------------------------------------------ANSFVGTPYWMA 190 (948)
T ss_pred --------------------------------------------------------------------hhcccCCccccc
Confidence 012689999999
Q ss_pred CccccC---CCCCccccchhhhhhhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHH-HHHHHcCCCCCCCC
Q 004998 280 PEELAG---APVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEA-SFCLWLLHPEPSGR 352 (720)
Q Consensus 280 PE~l~~---~~~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~-~li~~~L~~dP~~R 352 (720)
||++.. +.|+-++||||||++..||.- |++..+... +...|.....|.-..+.|++.. .|+..||++-|.+|
T Consensus 191 PEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMS-ALYHIAQNesPtLqs~eWS~~F~~Fvd~CLqKipqeR 269 (948)
T KOG0577|consen 191 PEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-ALYHIAQNESPTLQSNEWSDYFRNFVDSCLQKIPQER 269 (948)
T ss_pred hhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHH-HHHHHHhcCCCCCCCchhHHHHHHHHHHHHhhCcccC
Confidence 999853 449999999999999999998 777666554 3444555555554556777665 99999999999999
Q ss_pred CChHHHHcCcccCCCcc
Q 004998 353 PKMGELLQSEFLNEPRD 369 (720)
Q Consensus 353 pta~eiL~hp~~~~~~~ 369 (720)
||.+++|.|+|+...+.
T Consensus 270 ptse~ll~H~fv~R~Rp 286 (948)
T KOG0577|consen 270 PTSEELLKHRFVLRERP 286 (948)
T ss_pred CcHHHHhhcchhccCCC
Confidence 99999999999987744
No 30
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-34 Score=299.68 Aligned_cols=234 Identities=16% Similarity=0.170 Sum_probs=175.7
Q ss_pred CCccccccccccCCCCccceeeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCH
Q 004998 43 RLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDV 120 (720)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~ 120 (720)
..++++++.+-.-...-..+| +|...++.++|||||+++. .|..+. .+|+||.| .+|++.++|+. ....++|
T Consensus 52 e~VAIK~inLEkc~~~ld~l~--kE~~~msl~~HPNIv~~~~-sFvv~~---~LWvVmpfMa~GS~ldIik~~~~~Gl~E 125 (516)
T KOG0582|consen 52 EVVAIKIINLEKCNNDLDALR--KEVQTMSLIDHPNIVTYHC-SFVVDS---ELWVVMPFMAGGSLLDIIKTYYPDGLEE 125 (516)
T ss_pred CEEEEEEeehhhhhhhHHHHH--HHHHHhhhcCCCCcceEEE-EEEecc---eeEEeehhhcCCcHHHHHHHHccccccH
Confidence 444555555544333322333 4566888899999999999 554444 47999999 99999999943 3344999
Q ss_pred HHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHh
Q 004998 121 YECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQ 200 (720)
Q Consensus 121 ~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (720)
..+..|+++++.||+|||.+|-||||||+.||||+.+|.|||.|||.....
T Consensus 126 ~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l----------------------------- 176 (516)
T KOG0582|consen 126 ASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTVKLADFGVSASL----------------------------- 176 (516)
T ss_pred HHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCcEEEcCceeeeee-----------------------------
Confidence 999999999999999999999999999999999999999999999876221
Q ss_pred hhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCC
Q 004998 201 RRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASP 280 (720)
Q Consensus 201 ~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~AP 280 (720)
.|-|. + +. .+....+||++||||
T Consensus 177 -------~~~G~-R-----------------------------------------------~~--~rf~tfvgtp~wmAP 199 (516)
T KOG0582|consen 177 -------FDSGD-R-----------------------------------------------QV--TRFNTFVGTPCWMAP 199 (516)
T ss_pred -------cccCc-e-----------------------------------------------ee--EeeccccCcccccCh
Confidence 11110 0 00 000125899999999
Q ss_pred ccccCCC--CCccccchhhhhhhhhccc---cCCCCchHHHHHHHhhcCCCCccccccC--------ch-HHHHHHHcCC
Q 004998 281 EELAGAP--VSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF--------PK-EASFCLWLLH 346 (720)
Q Consensus 281 E~l~~~~--~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~--------p~-~~~li~~~L~ 346 (720)
|++...- |++++||||||++..||.+ ||....+....+..+.+..+.+. .... ++ ...++..||.
T Consensus 200 Evl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~-t~~~~~d~~k~~~ksf~e~i~~CL~ 278 (516)
T KOG0582|consen 200 EVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLL-TSGLDKDEDKKFSKSFREMIALCLV 278 (516)
T ss_pred HHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCcc-cccCChHHhhhhcHHHHHHHHHHhh
Confidence 9975543 9999999999999999999 88777776666666665433222 2222 22 2389999999
Q ss_pred CCCCCCCChHHHHcCcccCCCcc
Q 004998 347 PEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 347 ~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
.||.+||||.++|.|+||+....
T Consensus 279 kDP~kRptAskLlkh~FFk~~k~ 301 (516)
T KOG0582|consen 279 KDPSKRPTASKLLKHAFFKKAKS 301 (516)
T ss_pred cCcccCCCHHHHhccHHHhhccc
Confidence 99999999999999999998744
No 31
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=2e-34 Score=307.94 Aligned_cols=206 Identities=20% Similarity=0.271 Sum_probs=168.1
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCceec
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 145 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHr 145 (720)
+|+.|+..++|||||.+++ +|+... ++|+|.||.-|+|+.+|...+ .++++.++.|.+|++.||.|||+.+|+||
T Consensus 50 ~ev~i~r~lkHpniv~m~e-sfEt~~---~~~vVte~a~g~L~~il~~d~-~lpEe~v~~~a~~LVsaL~yLhs~rilhr 124 (808)
T KOG0597|consen 50 QEVRILRSLKHPNIVEMLE-SFETSA---HLWVVTEYAVGDLFTILEQDG-KLPEEQVRAIAYDLVSALYYLHSNRILHR 124 (808)
T ss_pred HHHHHHHhcCCcchhhHHH-hhcccc---eEEEEehhhhhhHHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHHhcCcccc
Confidence 6777999999999999999 787775 679999996669999996555 49999999999999999999999999999
Q ss_pred cCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccccc
Q 004998 146 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 225 (720)
Q Consensus 146 DLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~ 225 (720)
|+||.|||+...|.+|++|||+++..+... .
T Consensus 125 d~kPqniLl~~~~~~KlcdFg~Ar~m~~~t---------------------------------------------~---- 155 (808)
T KOG0597|consen 125 DMKPQNILLEKGGTLKLCDFGLARAMSTNT---------------------------------------------S---- 155 (808)
T ss_pred cCCcceeeecCCCceeechhhhhhhcccCc---------------------------------------------e----
Confidence 999999999999999998887774321110 0
Q ss_pred ccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhcc
Q 004998 226 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 305 (720)
Q Consensus 226 ~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLl 305 (720)
-.+...|||.|||||++.+.+|+..+|+||||||+|||+
T Consensus 156 -----------------------------------------vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~ 194 (808)
T KOG0597|consen 156 -----------------------------------------VLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELY 194 (808)
T ss_pred -----------------------------------------eeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHh
Confidence 001257999999999999999999999999999999999
Q ss_pred c---cCCCCchHHHHHHHhhc-CCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004998 306 C---PFSTGEEKTRTMSSLRH-RVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 306 t---pf~~~~~~~~~~~~l~~-~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
+ ||....-. ...+.|.+ ...||. ...+....|+..+|.+||.+|.|..+++.|||+++...
T Consensus 195 ~G~PPF~a~si~-~Lv~~I~~d~v~~p~--~~S~~f~nfl~gLL~kdP~~RltW~~Ll~HpF~k~~~~ 259 (808)
T KOG0597|consen 195 VGQPPFYARSIT-QLVKSILKDPVKPPS--TASSSFVNFLQGLLIKDPAQRLTWTDLLGHPFWKGKIN 259 (808)
T ss_pred cCCCCchHHHHH-HHHHHHhcCCCCCcc--cccHHHHHHHHHHhhcChhhcccHHHHhcChHHhhhhh
Confidence 9 55443333 33333433 333333 44566679999999999999999999999999987643
No 32
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-33 Score=303.57 Aligned_cols=242 Identities=18% Similarity=0.198 Sum_probs=180.9
Q ss_pred CCcccccccccC------CC-CCCccccccccccCCCCccceeeeehhhhcccCC-CCCceecccceeecCCCCCcEEEE
Q 004998 28 SSRALNISGVSD------RN-PRLLRGERFGVRGDDSNDFELRKHSDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHA 99 (720)
Q Consensus 28 ~~~~~~~~~~~~------~~-~~~~~~~~~~~~~~~~~~~~~r~~~e~~~Ls~l~-HpnIV~l~~~~~~~~~~~~~~~lv 99 (720)
-.+.+|.+.|+. .. .+..+.+.+.-..........-..+|..+|.++. |||||.+++ +|++.. .+++|
T Consensus 39 l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~-~~e~~~---~~~lv 114 (382)
T KOG0032|consen 39 LGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKD-AFEDPD---SVYLV 114 (382)
T ss_pred ehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEE-EEEcCC---eEEEE
Confidence 345666666665 22 2223333322222222222233447888999999 999999999 777765 67999
Q ss_pred Eec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEccC----CceEEeccCcccCCCCC
Q 004998 100 IEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSF----NHVSFIESASCSDSGSD 174 (720)
Q Consensus 100 ~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~----~~vkliDfg~a~~~g~~ 174 (720)
||+ .||.|.+.|.+. . +++..+..+++||+.++.|||+.||+||||||+|||+... +.+|++|||++......
T Consensus 115 mEL~~GGeLfd~i~~~-~-~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~~ 192 (382)
T KOG0032|consen 115 MELCEGGELFDRIVKK-H-YSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKPG 192 (382)
T ss_pred EEecCCchHHHHHHHc-c-CCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEccCC
Confidence 999 999999999554 3 9999999999999999999999999999999999999733 47999888887433211
Q ss_pred CcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccch
Q 004998 175 SHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNV 254 (720)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~ 254 (720)
.
T Consensus 193 ~------------------------------------------------------------------------------- 193 (382)
T KOG0032|consen 193 E------------------------------------------------------------------------------- 193 (382)
T ss_pred c-------------------------------------------------------------------------------
Confidence 0
Q ss_pred hhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhccc---cCCCCchHHHHHHHhhcCC--CCcc
Q 004998 255 EQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRV--LPPQ 329 (720)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~--~p~~ 329 (720)
.....+||+.|+|||++.+.+|+..+||||+||++|.|++ ||.......... .+..+. ++..
T Consensus 194 ------------~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~-~i~~~~~~f~~~ 260 (382)
T KOG0032|consen 194 ------------RLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFL-AILRGDFDFTSE 260 (382)
T ss_pred ------------eEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHH-HHHcCCCCCCCC
Confidence 0012689999999999999999999999999999999999 666655443333 333332 3333
Q ss_pred ccc-cCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 330 LLL-KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 330 ~~~-~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
.+. .+....+|+..||..||..|+|+.++|+|||++..
T Consensus 261 ~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~HpWi~~~ 299 (382)
T KOG0032|consen 261 PWDDISESAKDFIRKLLEFDPRKRLTAAQALQHPWIKSI 299 (382)
T ss_pred CccccCHHHHHHHHHhcccCcccCCCHHHHhcCccccCC
Confidence 333 34444599999999999999999999999999986
No 33
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=6e-34 Score=306.01 Aligned_cols=211 Identities=18% Similarity=0.197 Sum_probs=173.3
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHh-CCCCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLD-KPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~-~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
-.+.|..+++++.|||||.+++.|.+++. .++|||+| .||+|.+.|. +.+..+++..+..||.||+.||.|||+.
T Consensus 49 ~A~~E~~lis~~~hP~iv~y~ds~~~~~~---~l~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~ 125 (426)
T KOG0589|consen 49 SAIQEMDLLSKLLHPNIVEYKDSFEEDGQ---LLCIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHEN 125 (426)
T ss_pred HHHHHHHHHHhccCCCeeeeccchhcCCc---eEEEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhh
Confidence 34588899999999999999996666653 48999999 9999999993 3446689999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004998 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
.|+|||||+.||+++.++.|+|.|||+++..+.+. +|
T Consensus 126 ~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~---------------------------------~~---------- 162 (426)
T KOG0589|consen 126 RVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPED---------------------------------SL---------- 162 (426)
T ss_pred hhhcccchhhhhhccccCceeecchhhhhhcCCch---------------------------------hh----------
Confidence 99999999999999999999997777775543321 00
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhh
Q 004998 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
....+|||.||+||++.+.+|+.++|||||||+
T Consensus 163 -----------------------------------------------a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~ 195 (426)
T KOG0589|consen 163 -----------------------------------------------ASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCC 195 (426)
T ss_pred -----------------------------------------------hheecCCCcccCHHHhCCCCCCccCcchhhcch
Confidence 012689999999999999999999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
+|||++ +|...+...-..+ +......|...........++..||..+|..||++.++|.+|.+...
T Consensus 196 ~yEm~~lk~aF~a~~m~~Li~k-i~~~~~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~P~l~~~ 264 (426)
T KOG0589|consen 196 LYEMCTLKPAFKASNMSELILK-INRGLYSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRRPHLLRY 264 (426)
T ss_pred HHHHHhcccccCccchHHHHHH-HhhccCCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhChhhhhH
Confidence 999999 6777665544444 44444555444455566699999999999999999999999876654
No 34
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=7.1e-34 Score=301.40 Aligned_cols=203 Identities=16% Similarity=0.161 Sum_probs=162.1
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..+|.+++||||+++++ ++.+.. .+|++||| .+++|.+++.+.+ .+++..++.++.||+.||.|||++||
T Consensus 48 ~~~E~~~l~~l~hp~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i 122 (291)
T cd05612 48 VHNEKRVLKEVSHPFIIRLFW-TEHDQR---FLYMLMEYVPGGELFSYLRNSG-RFSNSTGLFYASEIVCALEYLHSKEI 122 (291)
T ss_pred HHHHHHHHHhCCCCcHhhhHh-hhccCC---eEEEEEeCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 346778999999999999999 444432 68999999 8999999995544 48999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.+||+|||++......
T Consensus 123 ~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~------------------------------------------------ 154 (291)
T cd05612 123 VYRDLKPENILLDKEGHIKLTDFGFAKKLRDR------------------------------------------------ 154 (291)
T ss_pred eecCCCHHHeEECCCCCEEEEecCcchhccCC------------------------------------------------
Confidence 99999999999999999999999887321000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
.....||+.|+|||++.+..++.++|||||||++|
T Consensus 155 ---------------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ 189 (291)
T cd05612 155 ---------------------------------------------TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIY 189 (291)
T ss_pred ---------------------------------------------cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHH
Confidence 00136899999999999888999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCCCCccccc-cCchHHHHHHHcCCCCCCCCCC-----hHHHHcCcccCCC
Q 004998 303 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEP 367 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~-~~p~~~~li~~~L~~dP~~Rpt-----a~eiL~hp~~~~~ 367 (720)
||++ ||...... ..+..+..... .++. ..+...+||.+||..||.+||+ +.++++||||...
T Consensus 190 ~l~~g~~pf~~~~~~-~~~~~i~~~~~--~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~ 260 (291)
T cd05612 190 EMLVGYPPFFDDNPF-GIYEKILAGKL--EFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFKSV 260 (291)
T ss_pred HHHhCCCCCCCCCHH-HHHHHHHhCCc--CCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCccccCC
Confidence 9999 66655443 33333333221 1112 2345569999999999999995 9999999999865
No 35
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-34 Score=315.11 Aligned_cols=220 Identities=19% Similarity=0.278 Sum_probs=176.9
Q ss_pred CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEE
Q 004998 75 DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFV 153 (720)
Q Consensus 75 ~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NIL 153 (720)
+||.++++|. +|+... ++|+|||| .||++..+. ....+++..++.|+..|+.||.|||++|||+||||.+|||
T Consensus 427 ~HPFL~~L~~-~fQT~~---~l~fvmey~~Ggdm~~~~--~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiL 500 (694)
T KOG0694|consen 427 RHPFLVNLFS-CFQTKE---HLFFVMEYVAGGDLMHHI--HTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLL 500 (694)
T ss_pred cCCeEeeccc-ccccCC---eEEEEEEecCCCcEEEEE--ecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheE
Confidence 6999999999 777665 78999999 999965544 2234999999999999999999999999999999999999
Q ss_pred EccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccCCCccc
Q 004998 154 MSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYG 233 (720)
Q Consensus 154 l~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~ 233 (720)
|+.+|++||+|||+|+.--.. ++
T Consensus 501 LD~eGh~kiADFGlcKe~m~~---------------------------------g~------------------------ 523 (694)
T KOG0694|consen 501 LDTEGHVKIADFGLCKEGMGQ---------------------------------GD------------------------ 523 (694)
T ss_pred EcccCcEEecccccccccCCC---------------------------------CC------------------------
Confidence 999999999999998531000 00
Q ss_pred cccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhccc---cCCC
Q 004998 234 THVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFST 310 (720)
Q Consensus 234 ~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt---pf~~ 310 (720)
+..+.+|||.|||||++.+..|+.++|+|||||+|||||. ||.+
T Consensus 524 ---------------------------------~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~g 570 (694)
T KOG0694|consen 524 ---------------------------------RTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPG 570 (694)
T ss_pred ---------------------------------ccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCC
Confidence 1122699999999999999999999999999999999999 8988
Q ss_pred CchHHHHHHHhhcCCCCccccccCchH-HHHHHHcCCCCCCCCCC-----hHHHHcCcccCCC-ccchHHHHHHHHHhhh
Q 004998 311 GEEKTRTMSSLRHRVLPPQLLLKFPKE-ASFCLWLLHPEPSGRPK-----MGELLQSEFLNEP-RDSMEEREAAIELREQ 383 (720)
Q Consensus 311 ~~~~~~~~~~l~~~~~p~~~~~~~p~~-~~li~~~L~~dP~~Rpt-----a~eiL~hp~~~~~-~~~l~e~~~~~~~~e~ 383 (720)
.++....-..+....+.|.+ ++.+ .+++.++|..+|++|.. +++|.+||||+.. ++.++.+..++++.+.
T Consensus 571 ddEee~FdsI~~d~~~yP~~---ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~hpFFr~i~w~~L~~r~i~PPf~P~ 647 (694)
T KOG0694|consen 571 DDEEEVFDSIVNDEVRYPRF---LSKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKHPFFRSIDWDDLLNRRIKPPFVPT 647 (694)
T ss_pred CCHHHHHHHHhcCCCCCCCc---ccHHHHHHHHHHhccCcccccCCCCCCchhhhhCCccccCCHHHHhhccCCCCCCcc
Confidence 77764433344333333333 2444 49999999999999973 6899999999987 6677777878888887
Q ss_pred hhHHHHHHHH
Q 004998 384 IDEEELLLEF 393 (720)
Q Consensus 384 ~~~~e~L~~f 393 (720)
+...+....|
T Consensus 648 i~~~~D~snF 657 (694)
T KOG0694|consen 648 IKGPEDVSNF 657 (694)
T ss_pred cCChhhhccc
Confidence 7765555544
No 36
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=1.1e-33 Score=305.44 Aligned_cols=203 Identities=16% Similarity=0.179 Sum_probs=163.4
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..+|.+++||||+++++ .+.++. .+|++||| .|++|.+++.+.+ .+++..+..++.||+.||.|||++||
T Consensus 65 ~~~E~~~l~~l~hp~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~i 139 (329)
T PTZ00263 65 VAQEKSILMELSHPFIVNMMC-SFQDEN---RVYFLLEFVVGGELFTHLRKAG-RFPNDVAKFYHAELVLAFEYLHSKDI 139 (329)
T ss_pred HHHHHHHHHhCCCCCCCcEEE-EEEcCC---EEEEEEcCCCCChHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 346788999999999999999 555443 67999999 8999999996544 48999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.+||+|||++......
T Consensus 140 vH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~------------------------------------------------ 171 (329)
T PTZ00263 140 IYRDLKPENLLLDNKGHVKVTDFGFAKKVPDR------------------------------------------------ 171 (329)
T ss_pred eecCCCHHHEEECCCCCEEEeeccCceEcCCC------------------------------------------------
Confidence 99999999999999999999998877321100
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
.....||+.|+|||++.+..++.++|||||||++|
T Consensus 172 ---------------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ 206 (329)
T PTZ00263 172 ---------------------------------------------TFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLY 206 (329)
T ss_pred ---------------------------------------------cceecCChhhcCHHHHcCCCCCCcceeechHHHHH
Confidence 00136899999999999988999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCCCCccccc-cCchHHHHHHHcCCCCCCCCCC-----hHHHHcCcccCCC
Q 004998 303 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEP 367 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~-~~p~~~~li~~~L~~dP~~Rpt-----a~eiL~hp~~~~~ 367 (720)
||++ ||...... ..+..+....++ ++. ..+...+||.+||+.||.+||+ +.+++.||||...
T Consensus 207 elltg~~pf~~~~~~-~~~~~i~~~~~~--~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp~f~~~ 277 (329)
T PTZ00263 207 EFIAGYPPFFDDTPF-RIYEKILAGRLK--FPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPYFHGA 277 (329)
T ss_pred HHHcCCCCCCCCCHH-HHHHHHhcCCcC--CCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCccCCC
Confidence 9999 66554433 344444443322 112 2234559999999999999986 7999999999874
No 37
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=1.8e-33 Score=302.97 Aligned_cols=207 Identities=18% Similarity=0.257 Sum_probs=163.5
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++||||+++++ .+.... .+|+|||| .|++|.+++.+. ..+++..++.++.||+.||+|||++|
T Consensus 41 ~~~~e~~~l~~l~hp~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~ 115 (323)
T cd05571 41 HTLTESRVLQNTRHPFLTALKY-SFQTHD---RLCFVMEYANGGELFFHLSRE-RVFSEDRARFYGAEIVSALGYLHSCD 115 (323)
T ss_pred HHHHHHHHHHhCCCCCCCCEEE-EEEcCC---EEEEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3346778999999999999999 555443 67999999 899999999554 35899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||+++...... .
T Consensus 116 ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~---------------------------------~------------ 150 (323)
T cd05571 116 VVYRDLKLENLMLDKDGHIKITDFGLCKEGISDG---------------------------------A------------ 150 (323)
T ss_pred eEeCCCCHHHEEECCCCCEEEeeCCCCcccccCC---------------------------------C------------
Confidence 9999999999999999999999998873210000 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
.....+||+.|+|||++.+..++.++|||||||++
T Consensus 151 ---------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il 185 (323)
T cd05571 151 ---------------------------------------------TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVM 185 (323)
T ss_pred ---------------------------------------------cccceecCccccChhhhcCCCCCccccCcccchhh
Confidence 00114689999999999998899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccc-cCchHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCC
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 367 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~-~~p~~~~li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~ 367 (720)
|||++ ||...... .....+..... .++. ..+...+||.+||+.||++|| ++.++++||||...
T Consensus 186 ~elltg~~Pf~~~~~~-~~~~~~~~~~~--~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h~~f~~~ 257 (323)
T cd05571 186 YEMMCGRLPFYNQDHE-KLFELILMEEI--RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHRFFASI 257 (323)
T ss_pred hhhhcCCCCCCCCCHH-HHHHHHHcCCC--CCCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcCCCcCCC
Confidence 99999 66554433 23333332211 1222 234456999999999999999 89999999999885
No 38
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=2.1e-33 Score=300.89 Aligned_cols=207 Identities=17% Similarity=0.248 Sum_probs=163.3
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++||||+++++ ++.... .+|+|||| .|++|.+++...+ .+++..+..++.||+.||.|||++|
T Consensus 39 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~ 113 (312)
T cd05585 39 HTLAERTVLAQVNCPFIVPLKF-SFQSPE---KLYLVLAFINGGELFHHLQREG-RFDLSRARFYTAELLCALENLHKFN 113 (312)
T ss_pred HHHHHHHHHHhCCCCcEeceee-EEecCC---eEEEEEcCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3446788999999999999998 555443 67999999 9999999995543 4999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.++|+|||++....... +
T Consensus 114 i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~---------------------------------~------------ 148 (312)
T cd05585 114 VIYRDLKPENILLDYQGHIALCDFGLCKLNMKDD---------------------------------D------------ 148 (312)
T ss_pred eEeCCCCHHHeEECCCCcEEEEECcccccCccCC---------------------------------C------------
Confidence 9999999999999999999999998874210000 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......||+.|+|||++.+..++.++|||||||++
T Consensus 149 ---------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil 183 (312)
T cd05585 149 ---------------------------------------------KTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLL 183 (312)
T ss_pred ---------------------------------------------ccccccCCcccCCHHHHcCCCCCCccceechhHHH
Confidence 00114689999999999998899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCC---ChHHHHcCcccCCC
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRP---KMGELLQSEFLNEP 367 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rp---ta~eiL~hp~~~~~ 367 (720)
|||++ ||...... .....+... +..++... +...+|+.+||.+||.+|| ++.|+|.||||...
T Consensus 184 ~el~tg~~pf~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~hp~~~~~ 253 (312)
T cd05585 184 YEMLTGLPPFYDENVN-EMYRKILQE--PLRFPDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNHPFFSQL 253 (312)
T ss_pred HHHHhCCCCcCCCCHH-HHHHHHHcC--CCCCCCcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcCCCcCCC
Confidence 99999 66554433 233333322 12222333 3445999999999999997 58999999999875
No 39
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.5e-34 Score=295.32 Aligned_cols=214 Identities=18% Similarity=0.219 Sum_probs=165.7
Q ss_pred ehhhhcccCCCCCceecccceeecCCC-CCcEEEEEecCCCCHHHHHhC---CCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAA-IDPFVHAIEWGDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~-~~~~~lv~E~~ggsL~~~L~~---~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+|..+|..++|||||+|...++..... .....+||||...+|.++++. .+..++..+++-|.+||++||.|||+.|
T Consensus 66 rEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVleymP~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~ 145 (364)
T KOG0658|consen 66 RELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVLEYMPETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHG 145 (364)
T ss_pred HHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHHHhchHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcC
Confidence 888999999999999999855544443 346788999988999999963 3556999999999999999999999999
Q ss_pred ceeccCCCCcEEEccC-CceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004998 142 IVVHNVRPSCFVMSSF-NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 142 IvHrDLKP~NILl~~~-~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
|+||||||.|+|++.+ |.+||||||.|+.....+
T Consensus 146 IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~e--------------------------------------------- 180 (364)
T KOG0658|consen 146 ICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKGE--------------------------------------------- 180 (364)
T ss_pred cccCCCChheEEEcCCCCeEEeccCCcceeeccCC---------------------------------------------
Confidence 9999999999999955 999999999985431110
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC-CCccccchhhhh
Q 004998 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGV 299 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGv 299 (720)
.+..+..|..|+|||.+.|.. |+++.||||.||
T Consensus 181 ----------------------------------------------pniSYicSRyYRaPELifga~~Yt~~IDiWSaGC 214 (364)
T KOG0658|consen 181 ----------------------------------------------PNISYICSRYYRAPELIFGATEYTTSIDIWSAGC 214 (364)
T ss_pred ----------------------------------------------CceeEEEeccccCHHHHcCccccCceeEEhhhhH
Confidence 011256799999999999987 999999999999
Q ss_pred hhhhccc--c-CCCCchHHHHHHHhhc-C-----------------CCCc---c-----ccc-cCchHHHHHHHcCCCCC
Q 004998 300 LLFELFC--P-FSTGEEKTRTMSSLRH-R-----------------VLPP---Q-----LLL-KFPKEASFCLWLLHPEP 349 (720)
Q Consensus 300 ll~eLlt--p-f~~~~~~~~~~~~l~~-~-----------------~~p~---~-----~~~-~~p~~~~li~~~L~~dP 349 (720)
++.||+- | |++.....+....+.- + .+|. . +.. ..|+..+|+.++|.++|
T Consensus 215 V~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P 294 (364)
T KOG0658|consen 215 VMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSP 294 (364)
T ss_pred HHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccCh
Confidence 9999998 4 4443333222221110 0 0010 0 111 23455699999999999
Q ss_pred CCCCChHHHHcCcccCCCccc
Q 004998 350 SGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 350 ~~Rpta~eiL~hp~~~~~~~~ 370 (720)
.+|.++.|+|.||||.+.+++
T Consensus 295 ~~R~~~~~~l~h~fFdelr~~ 315 (364)
T KOG0658|consen 295 SKRLSALEALAHPFFDELRDP 315 (364)
T ss_pred hhcCCHHHHhcchhhHHhhCc
Confidence 999999999999999988664
No 40
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=6.5e-33 Score=293.06 Aligned_cols=204 Identities=17% Similarity=0.222 Sum_probs=152.4
Q ss_pred hcccCCCCCceecccceeec-CCCCCcEEEEEecCCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccC
Q 004998 70 ELTHGDHLRNQGGLSGVCEN-EAAIDPFVHAIEWGDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 147 (720)
Q Consensus 70 ~Ls~l~HpnIV~l~~~~~~~-~~~~~~~~lv~E~~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDL 147 (720)
.|..++||||+++++.+... ......++++|||.+++|.+++.. ....+++..++.++.||+.||.|||++||+||||
T Consensus 57 ~l~~~~hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dl 136 (290)
T cd07862 57 HLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDL 136 (290)
T ss_pred hhcccCCCCcceEEEEEecccCCCCCcEEEEEccCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCC
Confidence 34456799999999943322 122346899999977899999944 3345899999999999999999999999999999
Q ss_pred CCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccccccc
Q 004998 148 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 227 (720)
Q Consensus 148 KP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q 227 (720)
||+|||++.++.+||+|||++.......
T Consensus 137 kp~Nil~~~~~~~kl~Dfg~~~~~~~~~---------------------------------------------------- 164 (290)
T cd07862 137 KPQNILVTSSGQIKLADFGLARIYSFQM---------------------------------------------------- 164 (290)
T ss_pred CHHHEEEcCCCCEEEccccceEeccCCc----------------------------------------------------
Confidence 9999999999999999988873321000
Q ss_pred CCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhccc-
Q 004998 228 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 306 (720)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt- 306 (720)
......||+.|+|||++.+..++.++|||||||++|||++
T Consensus 165 ---------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g 205 (290)
T cd07862 165 ---------------------------------------ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRR 205 (290)
T ss_pred ---------------------------------------ccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcC
Confidence 0011367999999999988889999999999999999999
Q ss_pred --cCCCCchHHHHHHHhhcCCCC--c----------------------cccccC-chHHHHHHHcCCCCCCCCCChHHHH
Q 004998 307 --PFSTGEEKTRTMSSLRHRVLP--P----------------------QLLLKF-PKEASFCLWLLHPEPSGRPKMGELL 359 (720)
Q Consensus 307 --pf~~~~~~~~~~~~l~~~~~p--~----------------------~~~~~~-p~~~~li~~~L~~dP~~Rpta~eiL 359 (720)
||............+.....| . .+.... +...+|+.+||++||++|||+.|+|
T Consensus 206 ~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l 285 (290)
T cd07862 206 KPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSAL 285 (290)
T ss_pred CCCcCCCCHHHHHHHHHHHhCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHh
Confidence 565544332222222111000 0 011122 2335999999999999999999999
Q ss_pred cCccc
Q 004998 360 QSEFL 364 (720)
Q Consensus 360 ~hp~~ 364 (720)
+||||
T Consensus 286 ~hp~f 290 (290)
T cd07862 286 SHPYF 290 (290)
T ss_pred cCCCC
Confidence 99997
No 41
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=4.8e-33 Score=300.60 Aligned_cols=218 Identities=15% Similarity=0.175 Sum_probs=161.6
Q ss_pred eeeehhhhcccCCCCCceecccceeecC-CCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENE-AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~-~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|++++||||+++++++.... .....+|++|||.+++|.+++.... .+++..++.++.||+.||.|||++|
T Consensus 45 ~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~ 123 (338)
T cd07859 45 RILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYVVFELMESDLHQVIKAND-DLTPEHHQFFLYQLLRALKYIHTAN 123 (338)
T ss_pred HHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEEEEEecCCCCHHHHHHhcc-cCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 4457888999999999999999443222 2233589999998789999995543 4999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||++.........
T Consensus 124 ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~-------------------------------------------- 159 (338)
T cd07859 124 VFHRDLKPKNILANADCKLKICDFGLARVAFNDTPT-------------------------------------------- 159 (338)
T ss_pred eecCCCCHHHeEECCCCcEEEccCccccccccccCc--------------------------------------------
Confidence 999999999999999999999999887432111000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC--CCCCccccchhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG--APVSCASDIYRLGV 299 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~--~~~s~~sDIwSLGv 299 (720)
.......+||+.|+|||++.+ ..++.++|||||||
T Consensus 160 -------------------------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGv 196 (338)
T cd07859 160 -------------------------------------------AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGC 196 (338)
T ss_pred -------------------------------------------cccccCCCCCCCcCCHHHHhccccccCchhHHHHHHH
Confidence 000011478999999999876 55899999999999
Q ss_pred hhhhccc---cCCCCchHHHH--H------------------------HHhhcCCCCc----cccccCchHHHHHHHcCC
Q 004998 300 LLFELFC---PFSTGEEKTRT--M------------------------SSLRHRVLPP----QLLLKFPKEASFCLWLLH 346 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~--~------------------------~~l~~~~~p~----~~~~~~p~~~~li~~~L~ 346 (720)
++|||++ ||......... + ..+... .+. .+....+...+|+.+||.
T Consensus 197 vl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~ 275 (338)
T cd07859 197 IFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEKARRYLSSMRKK-QPVPFSQKFPNADPLALRLLERLLA 275 (338)
T ss_pred HHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhhccc-CCCchHHhcCCCChHHHHHHHHHcC
Confidence 9999999 55443221100 0 001100 111 111223445699999999
Q ss_pred CCCCCCCChHHHHcCcccCCCcc
Q 004998 347 PEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 347 ~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
.||++|||+.|+|+||||+....
T Consensus 276 ~~P~~Rpt~~e~l~hp~f~~~~~ 298 (338)
T cd07859 276 FDPKDRPTAEEALADPYFKGLAK 298 (338)
T ss_pred cCcccCCCHHHHhcCchhhhcCc
Confidence 99999999999999999987644
No 42
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=5.7e-33 Score=295.97 Aligned_cols=213 Identities=15% Similarity=0.200 Sum_probs=161.3
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
+..+|..+++.++||||+++++ ++.+.. ..|+||||.+++|.+++......+++..++.++.||+.||.|||++||
T Consensus 49 ~~~~E~~~l~~l~h~niv~~~~-~~~~~~---~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i 124 (303)
T cd07869 49 TAIREASLLKGLKHANIVLLHD-IIHTKE---TLTLVFEYVHTDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYI 124 (303)
T ss_pred hHHHHHHHHhhCCCCCcCeEEE-EEecCC---eEEEEEECCCcCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 4446888999999999999999 555443 679999997789999996665669999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.+||+|||++....... .
T Consensus 125 vH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~--------------------------------~-------------- 158 (303)
T cd07869 125 LHRDLKPQNLLISDTGELKLADFGLARAKSVPS--------------------------------H-------------- 158 (303)
T ss_pred ecCCCCHHHEEECCCCCEEECCCCcceeccCCC--------------------------------c--------------
Confidence 999999999999999999999998873211100 0
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC-CCccccchhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLL 301 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGvll 301 (720)
......||+.|+|||++.+.. ++.++|||||||++
T Consensus 159 --------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il 194 (303)
T cd07869 159 --------------------------------------------TYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIF 194 (303)
T ss_pred --------------------------------------------cCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHH
Confidence 000135799999999987654 88999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhc--CC-----------------------CCcccc------ccCchHHHHHHHcCCC
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRH--RV-----------------------LPPQLL------LKFPKEASFCLWLLHP 347 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~--~~-----------------------~p~~~~------~~~p~~~~li~~~L~~ 347 (720)
|||++ ||............+.. +. .+..+. ...+...+|+.+||++
T Consensus 195 ~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~ 274 (303)
T cd07869 195 VEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQC 274 (303)
T ss_pred HHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhcc
Confidence 99999 66654332222211110 00 000000 0113445999999999
Q ss_pred CCCCCCChHHHHcCcccCCCcc
Q 004998 348 EPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 348 dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
||.+|||+.|+|+||||+....
T Consensus 275 dp~~R~s~~~~l~h~~f~~~~~ 296 (303)
T cd07869 275 FPKNRLSAQAALSHEYFSDLPP 296 (303)
T ss_pred CchhccCHHHHhcCcccccCCh
Confidence 9999999999999999988643
No 43
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=6.3e-33 Score=293.57 Aligned_cols=207 Identities=16% Similarity=0.199 Sum_probs=157.2
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..+|..++.+++||||+++++ ++.... .+++||||.+++|.+++...+..+++..++.++.||+.||+|||++||+
T Consensus 50 ~~~E~~~l~~l~h~niv~~~~-~~~~~~---~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~iv 125 (288)
T cd07871 50 AIREVSLLKNLKHANIVTLHD-IIHTER---CLTLVFEYLDSDLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKIL 125 (288)
T ss_pred HHHHHHHHHhCCCCCEeeEEE-EEcCCC---eEEEEEeCCCcCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 346888999999999999999 554443 5799999966799999966555689999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.+||+|||++....... .
T Consensus 126 H~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~---------------------------------~-------------- 158 (288)
T cd07871 126 HRDLKPQNLLINEKGELKLADFGLARAKSVPT---------------------------------K-------------- 158 (288)
T ss_pred cCCCCHHHEEECCCCCEEECcCcceeeccCCC---------------------------------c--------------
Confidence 99999999999999999999998873321100 0
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-CCCccccchhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLF 302 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGvll~ 302 (720)
......||+.|+|||++.+. .++.++|||||||++|
T Consensus 159 -------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~ 195 (288)
T cd07871 159 -------------------------------------------TYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILY 195 (288)
T ss_pred -------------------------------------------cccCceecccccChHHhcCCcccCcHHHHHHHHHHHH
Confidence 00013578999999998764 4899999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcC--------------------CCCcc--------ccccCchHHHHHHHcCCCCCCC
Q 004998 303 ELFC---PFSTGEEKTRTMSSLRHR--------------------VLPPQ--------LLLKFPKEASFCLWLLHPEPSG 351 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~--------------------~~p~~--------~~~~~p~~~~li~~~L~~dP~~ 351 (720)
||++ ||............+... .+|.. .....++..+||.+||++||.+
T Consensus 196 ~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~ 275 (288)
T cd07871 196 EMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKS 275 (288)
T ss_pred HHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCccc
Confidence 9999 565543332221111100 00000 0011234459999999999999
Q ss_pred CCChHHHHcCccc
Q 004998 352 RPKMGELLQSEFL 364 (720)
Q Consensus 352 Rpta~eiL~hp~~ 364 (720)
|||++|+|+||||
T Consensus 276 R~t~~~~l~hp~f 288 (288)
T cd07871 276 RISAEAALRHSYF 288 (288)
T ss_pred CCCHHHHhcCCCC
Confidence 9999999999998
No 44
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=5.3e-33 Score=277.85 Aligned_cols=202 Identities=19% Similarity=0.283 Sum_probs=156.5
Q ss_pred CCCCCceecccceeecC-CCCCcEEEEEec-CCCCHHHHH-hCCCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCC
Q 004998 74 GDHLRNQGGLSGVCENE-AAIDPFVHAIEW-GDVSLRQWL-DKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPS 150 (720)
Q Consensus 74 l~HpnIV~l~~~~~~~~-~~~~~~~lv~E~-~ggsL~~~L-~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~ 150 (720)
-.|||||.+++ +|+.. .....+.+|||+ .||.|...| .+....+++.++..|++||..||.|||+.+|.||||||+
T Consensus 112 s~h~~iV~Iid-VyeNs~~~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpE 190 (400)
T KOG0604|consen 112 SGHPHIVSIID-VYENSYQGRKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPE 190 (400)
T ss_pred cCCCceEEeeh-hhhhhccCceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChh
Confidence 45999999999 55443 334457899999 999999999 344556999999999999999999999999999999999
Q ss_pred cEEEc---cCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccccccc
Q 004998 151 CFVMS---SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 227 (720)
Q Consensus 151 NILl~---~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q 227 (720)
|+|.. .+..+||+|||+|+....+ .++
T Consensus 191 NLLyt~t~~na~lKLtDfGFAK~t~~~---------------------------------~~L----------------- 220 (400)
T KOG0604|consen 191 NLLYTTTSPNAPLKLTDFGFAKETQEP---------------------------------GDL----------------- 220 (400)
T ss_pred heeeecCCCCcceEecccccccccCCC---------------------------------ccc-----------------
Confidence 99997 4456788777776432111 000
Q ss_pred CCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhcccc
Q 004998 228 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFCP 307 (720)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLltp 307 (720)
...+-||+|.|||++-...|+.+.|+|||||++|-|||+
T Consensus 221 -----------------------------------------~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCG 259 (400)
T KOG0604|consen 221 -----------------------------------------MTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 259 (400)
T ss_pred -----------------------------------------cCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcC
Confidence 113569999999999888899999999999999999995
Q ss_pred CCCC---ch---HHHHHHHhhc--CCCCccccccCchHH-HHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 308 FSTG---EE---KTRTMSSLRH--RVLPPQLLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 308 f~~~---~~---~~~~~~~l~~--~~~p~~~~~~~p~~~-~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|+++ .. .--+...|+. -.+|..-+...++.+ ++|+.+|..+|.+|.|+.+++.|||+++.
T Consensus 260 yPPFYS~hg~aispgMk~rI~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~~ 328 (400)
T KOG0604|consen 260 YPPFYSNHGLAISPGMKRRIRTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQY 328 (400)
T ss_pred CCcccccCCccCChhHHhHhhccCccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcCchhccc
Confidence 5543 11 0112233333 345555555555555 99999999999999999999999999987
No 45
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=6.4e-33 Score=300.95 Aligned_cols=202 Identities=16% Similarity=0.144 Sum_probs=162.8
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..++..++|||||++++ ++.+.. .+|+|||| .|++|.+++.... .+++..+..++.||+.||.|||++||+
T Consensus 79 ~~E~~~l~~l~hp~Iv~~~~-~~~~~~---~~~lv~Ey~~~g~L~~~i~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~iv 153 (340)
T PTZ00426 79 FSERKILNYINHPFCVNLYG-SFKDES---YLYLVLEFVIGGEFFTFLRRNK-RFPNDVGCFYAAQIVLIFEYLQSLNIV 153 (340)
T ss_pred HHHHHHHHhCCCCCCcceEE-EEEeCC---EEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeE
Confidence 36778999999999999999 555443 68999999 8999999995544 499999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.+||+|||++......
T Consensus 154 HrDLkp~NILl~~~~~ikL~DFG~a~~~~~~------------------------------------------------- 184 (340)
T PTZ00426 154 YRDLKPENLLLDKDGFIKMTDFGFAKVVDTR------------------------------------------------- 184 (340)
T ss_pred ccCCCHHHEEECCCCCEEEecCCCCeecCCC-------------------------------------------------
Confidence 9999999999999999999998887321100
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
.....||+.|+|||++.+..++.++|||||||++||
T Consensus 185 --------------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~e 220 (340)
T PTZ00426 185 --------------------------------------------TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYE 220 (340)
T ss_pred --------------------------------------------cceecCChhhcCHHHHhCCCCCccccccchhhHHHH
Confidence 001368999999999998889999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCCCCcccccc-CchHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCC
Q 004998 304 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLLK-FPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~~~p~~~~~~-~p~~~~li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~ 367 (720)
|++ ||...... .....+...... ++.. .+...+|+.+||+.||.+|+ ++.++++||||...
T Consensus 221 ll~G~~Pf~~~~~~-~~~~~i~~~~~~--~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~f~~~ 290 (340)
T PTZ00426 221 ILVGCPPFYANEPL-LIYQKILEGIIY--FPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPWFGNI 290 (340)
T ss_pred HhcCCCCCCCCCHH-HHHHHHhcCCCC--CCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCCCcCCC
Confidence 999 66654443 334444433221 1122 23445999999999999995 89999999999875
No 46
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=2.9e-33 Score=295.75 Aligned_cols=208 Identities=14% Similarity=0.186 Sum_probs=161.3
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
..+|..+|.+++||||+++++ .+.+.. .++++||| .+++|.+++.. ....+++..++.++.||+.||.|||++|
T Consensus 47 ~~~E~~il~~l~~~~iv~~~~-~~~~~~---~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ 122 (285)
T cd05631 47 ALNEKRILEKVNSRFVVSLAY-AYETKD---ALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRER 122 (285)
T ss_pred HHHHHHHHHhcCCCcEEEEEE-EEccCC---eEEEEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 346788999999999999999 554443 57999999 89999988843 3345899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.++|+|||++.......
T Consensus 123 iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~---------------------------------------------- 156 (285)
T cd05631 123 IVYRDLKPENILLDDRGHIRISDLGLAVQIPEGE---------------------------------------------- 156 (285)
T ss_pred EEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCC----------------------------------------------
Confidence 9999999999999999999999998873210000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......||+.|+|||++.+..++.++|||||||++
T Consensus 157 ---------------------------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil 191 (285)
T cd05631 157 ---------------------------------------------TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLI 191 (285)
T ss_pred ---------------------------------------------eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHH
Confidence 00013689999999999998899999999999999
Q ss_pred hhccc---cCCCCchH---HHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCC-----hHHHHcCcccCCCc
Q 004998 302 FELFC---PFSTGEEK---TRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEPR 368 (720)
Q Consensus 302 ~eLlt---pf~~~~~~---~~~~~~l~~~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rpt-----a~eiL~hp~~~~~~ 368 (720)
|||++ ||...... ......+... +..+.... +...+|+.+||..||.+||+ ++++++||||....
T Consensus 192 ~el~~g~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~~~~~~ 268 (285)
T cd05631 192 YEMIQGQSPFRKRKERVKREEVDRRVKED--QEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPIFKNIN 268 (285)
T ss_pred HHHHhCCCCCCCCCcchhHHHHHHHhhcc--cccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHhhcCCC
Confidence 99999 66554321 1112222111 11222223 34559999999999999997 89999999999873
No 47
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.9e-33 Score=299.29 Aligned_cols=210 Identities=18% Similarity=0.236 Sum_probs=166.6
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|+.||+.++||+||+||+.+|... .++|+.|| +||-....+-.-++.|++.++..+++|+++||.|||+++|||
T Consensus 78 VEIeILa~CdHP~ivkLl~ayy~en----kLwiliEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIH 153 (1187)
T KOG0579|consen 78 VEIEILAECDHPVIVKLLSAYYFEN----KLWILIEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIH 153 (1187)
T ss_pred hhhhhhhcCCChHHHHHHHHHhccC----ceEEEEeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhh
Confidence 6777999999999999999777655 47999999 788888877777788999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
||||..|||++-+|.++|+|||++...-..
T Consensus 154 RDLKAGNiL~TldGdirLADFGVSAKn~~t-------------------------------------------------- 183 (1187)
T KOG0579|consen 154 RDLKAGNILLTLDGDIRLADFGVSAKNKST-------------------------------------------------- 183 (1187)
T ss_pred hhccccceEEEecCcEeeecccccccchhH--------------------------------------------------
Confidence 999999999999999999999886211000
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCcccc-----CCCCCccccchhhhh
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-----GAPVSCASDIYRLGV 299 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~-----~~~~s~~sDIwSLGv 299 (720)
-.+...++|||+|||||+.. ..+|++++||||||+
T Consensus 184 ----------------------------------------~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGI 223 (1187)
T KOG0579|consen 184 ----------------------------------------RQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGI 223 (1187)
T ss_pred ----------------------------------------HhhhccccCCcccccchheeeccccCCCchhhhhHHhhhh
Confidence 00112368999999999975 456999999999999
Q ss_pred hhhhccccCCCC--chHHHHHHHhhcCCCCccc-cccCchH-HHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004998 300 LLFELFCPFSTG--EEKTRTMSSLRHRVLPPQL-LLKFPKE-ASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 300 ll~eLltpf~~~--~~~~~~~~~l~~~~~p~~~-~~~~p~~-~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
+|.||.-.-++. -.....+..+.+..+|.-+ +..|... .||+.+||.+||..||++.+||+||||.....
T Consensus 224 TLIEMAqiEPPHhelnpMRVllKiaKSePPTLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hpfv~~~~S 297 (1187)
T KOG0579|consen 224 TLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKHPFVQNAPS 297 (1187)
T ss_pred HHHHHhccCCCccccchHHHHHHHhhcCCCcccCcchhhhHHHHHHHHHHhcCCccCCCHHHHhhCcccccCCc
Confidence 999999832222 2223444445444433322 3355544 49999999999999999999999999997644
No 48
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.2e-33 Score=273.45 Aligned_cols=243 Identities=16% Similarity=0.225 Sum_probs=184.3
Q ss_pred ccccCCcccccccccC------CCCCCccccccccccCC---CCccceeeeehhhhcccCCCCCceecccceeecCCCCC
Q 004998 24 QDSDSSRALNISGVSD------RNPRLLRGERFGVRGDD---SNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAID 94 (720)
Q Consensus 24 ~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~---~~~~~~r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~ 94 (720)
+.++.+|.||.+-|+. +...+..+-++.+...- .-...+| ||+.|-++|+||||+++|+ +|.+..
T Consensus 22 ~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlr--REiEIqs~L~hpnilrlY~-~fhd~~--- 95 (281)
T KOG0580|consen 22 DDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLR--REIEIQSHLRHPNILRLYG-YFHDSK--- 95 (281)
T ss_pred hhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhh--heeEeecccCCccHHhhhh-heeccc---
Confidence 4557788888888875 22222222222222110 0112223 4555889999999999999 666665
Q ss_pred cEEEEEec-CCCCHHHHHh-CCCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCC
Q 004998 95 PFVHAIEW-GDVSLRQWLD-KPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSG 172 (720)
Q Consensus 95 ~~~lv~E~-~ggsL~~~L~-~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g 172 (720)
.+|+++|| .+|+|...|. .....+++..+..|++|++.||.|+|..+||||||||+|+|++..|.+|++|||-+....
T Consensus 96 riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p 175 (281)
T KOG0580|consen 96 RIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP 175 (281)
T ss_pred eeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCCCeeccCCCceeecC
Confidence 57999999 9999999994 345569999999999999999999999999999999999999999999998887652110
Q ss_pred CCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccCCCcccccccccccccccccccccc
Q 004998 173 SDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRV 252 (720)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~ 252 (720)
.
T Consensus 176 ~------------------------------------------------------------------------------- 176 (281)
T KOG0580|consen 176 S------------------------------------------------------------------------------- 176 (281)
T ss_pred C-------------------------------------------------------------------------------
Confidence 0
Q ss_pred chhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhccc---cCCCCchHHHHHHHhhcCCCCcc
Q 004998 253 NVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQ 329 (720)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~ 329 (720)
.+....+||..|.+||...+..++..+|+|++|++.||++. ||.... ...+++.|++-.+.
T Consensus 177 -------------~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~-~~etYkrI~k~~~~-- 240 (281)
T KOG0580|consen 177 -------------NKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQS-HSETYKRIRKVDLK-- 240 (281)
T ss_pred -------------CCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhh-hHHHHHHHHHcccc--
Confidence 01123689999999999999999999999999999999999 676655 45667777653221
Q ss_pred ccccCch-HHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 330 LLLKFPK-EASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 330 ~~~~~p~-~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
++...+. .+|||.+||..+|.+|.+..|++.|||+...
T Consensus 241 ~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpwI~a~ 279 (281)
T KOG0580|consen 241 FPSTISGGAADLISRLLVKNPIERLALTEVMDHPWIVAN 279 (281)
T ss_pred CCcccChhHHHHHHHHhccCccccccHHHHhhhHHHHhc
Confidence 1133344 4599999999999999999999999998753
No 49
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=9.1e-33 Score=294.92 Aligned_cols=243 Identities=16% Similarity=0.217 Sum_probs=183.0
Q ss_pred eecCCCcccccccccCCcccccccccCCCCCCccccccccccCCCCccceeeeehhhhcccCCCCCceecccceeecCCC
Q 004998 13 IIMEGSSDSAWQDSDSSRALNISGVSDRNPRLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAA 92 (720)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~ 92 (720)
|.+|..++=-|..++.-+++..+.+. .+.++++++ .--+|.++..|.+|+||||+.+.| +|....
T Consensus 121 iPFe~IsELeWlGSGaQGAVF~Grl~---netVAVKKV----------~elkETdIKHLRkLkH~NII~FkG-VCtqsP- 185 (904)
T KOG4721|consen 121 IPFEEISELEWLGSGAQGAVFLGRLH---NETVAVKKV----------RELKETDIKHLRKLKHPNIITFKG-VCTQSP- 185 (904)
T ss_pred CCHHHhhhhhhhccCcccceeeeecc---CceehhHHH----------hhhhhhhHHHHHhccCcceeeEee-eecCCc-
Confidence 45555556666665555554443332 223333321 124568888999999999999999 554443
Q ss_pred CCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCC
Q 004998 93 IDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDS 171 (720)
Q Consensus 93 ~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~ 171 (720)
-+||+||| ..|.|.+.|+. +++++......|..+|+.|+.|||.+.|||||||.-||||+.+..|||+|||.++..
T Consensus 186 --cyCIiMEfCa~GqL~~VLka-~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~ 262 (904)
T KOG4721|consen 186 --CYCIIMEFCAQGQLYEVLKA-GRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDDVVKISDFGTSKEL 262 (904)
T ss_pred --eeEEeeeccccccHHHHHhc-cCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccceEEeccccchHhh
Confidence 58999999 89999999954 456899999999999999999999999999999999999999999999999987432
Q ss_pred CCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccc
Q 004998 172 GSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNR 251 (720)
Q Consensus 172 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g 251 (720)
. |.
T Consensus 263 ~------------------------------------~~----------------------------------------- 265 (904)
T KOG4721|consen 263 S------------------------------------DK----------------------------------------- 265 (904)
T ss_pred h------------------------------------hh-----------------------------------------
Confidence 1 00
Q ss_pred cchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhccc---cCCCCchHHHHHHHhhcCCCCc
Q 004998 252 VNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPP 328 (720)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~ 328 (720)
-+...+.||..|||||++...+++.++|||||||+|||||| ||...+.. .++--+....+.-
T Consensus 266 --------------STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdss-AIIwGVGsNsL~L 330 (904)
T KOG4721|consen 266 --------------STKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSS-AIIWGVGSNSLHL 330 (904)
T ss_pred --------------hhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchh-eeEEeccCCcccc
Confidence 00122689999999999999999999999999999999999 77664433 1222223344444
Q ss_pred cccccCchHH-HHHHHcCCCCCCCCCChHHHHcCcccC
Q 004998 329 QLLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLN 365 (720)
Q Consensus 329 ~~~~~~p~~~-~li~~~L~~dP~~Rpta~eiL~hp~~~ 365 (720)
..+..+|+.. -|++.||.-.|..||++.+||.|==|.
T Consensus 331 pvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~HldIa 368 (904)
T KOG4721|consen 331 PVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDIA 368 (904)
T ss_pred cCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhhc
Confidence 4556777766 678889999999999999999985333
No 50
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=7.9e-33 Score=299.11 Aligned_cols=204 Identities=17% Similarity=0.238 Sum_probs=162.1
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..|..++.+++||||+++++ .+.... .+|+|||| .|++|.+++...+ .+++..++.++.||+.||.|||++||+
T Consensus 49 ~~e~~~l~~~~h~~iv~~~~-~~~~~~---~~~lv~e~~~g~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lH~~~iv 123 (333)
T cd05600 49 LTERDILTTTKSEWLVKLLY-AFQDDE---YLYLAMEYVPGGDFRTLLNNLG-VLSEDHARFYMAEMFEAVDALHELGYI 123 (333)
T ss_pred HHHHHHHHhCCCCCCccEEE-EEEcCC---EEEEEEeCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 36777899999999999999 555443 68999999 8999999995543 489999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.+||+|||++......
T Consensus 124 H~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~~------------------------------------------------- 154 (333)
T cd05600 124 HRDLKPENFLIDASGHIKLTDFGLSKGIVTY------------------------------------------------- 154 (333)
T ss_pred ccCCCHHHEEECCCCCEEEEeCcCCcccccc-------------------------------------------------
Confidence 9999999999999999999999887321000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
....+||+.|+|||++.+..++.++|||||||++||
T Consensus 155 --------------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~e 190 (333)
T cd05600 155 --------------------------------------------ANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYE 190 (333)
T ss_pred --------------------------------------------cCCcccCccccChhHhcCCCCCCccceecchHHHhh
Confidence 011468999999999999899999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcC---CCCcccc----ccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 304 LFC---PFSTGEEKTRTMSSLRHR---VLPPQLL----LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~---~~p~~~~----~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|++ ||...... ..+..+... ...+... ...+...+|+.+||..+|.+||++.++++||||...
T Consensus 191 ll~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h~~~~~~ 263 (333)
T cd05600 191 FLCGFPPFSGSTPN-ETWENLKYWKETLQRPVYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNHPFFKEV 263 (333)
T ss_pred hhhCCCCCCCCCHH-HHHHHHHhccccccCCCCCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhCcccCCC
Confidence 999 66554332 222222221 1111111 223455699999999999999999999999999975
No 51
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=1.5e-32 Score=289.72 Aligned_cols=206 Identities=18% Similarity=0.197 Sum_probs=153.6
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..++.+++||||+++++ ++.... .+|+|||| .++.| +.+......+++..++.++.||+.||.|||+.||+
T Consensus 48 ~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~l-~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~ 122 (287)
T cd07848 48 LRELKMLRTLKQENIVELKE-AFRRRG---KLYLVFEYVEKNML-ELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIV 122 (287)
T ss_pred HHHHHHHHhCCCccccchhh-hEecCC---EEEEEEecCCCCHH-HHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 36788999999999999999 444432 68999999 55544 44534344599999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+||+++.++.+||+|||.+........ .
T Consensus 123 H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~-------------------------------~--------------- 156 (287)
T cd07848 123 HRDIKPENLLISHNDVLKLCDFGFARNLSEGSN-------------------------------A--------------- 156 (287)
T ss_pred cCCCCHHHEEEcCCCcEEEeeccCccccccccc-------------------------------c---------------
Confidence 999999999999999999999988743211000 0
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......||+.|+|||++.+..++.++|||||||++||
T Consensus 157 -------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~e 193 (287)
T cd07848 157 -------------------------------------------NYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGE 193 (287)
T ss_pred -------------------------------------------cccccccccccCCcHHHcCCCCCCchhHHhHHHHHHH
Confidence 0011367999999999998889999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhh-cCCCC-------------------cc---------ccc-cCchHHHHHHHcCCCCCC
Q 004998 304 LFC---PFSTGEEKTRTMSSLR-HRVLP-------------------PQ---------LLL-KFPKEASFCLWLLHPEPS 350 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~-~~~~p-------------------~~---------~~~-~~p~~~~li~~~L~~dP~ 350 (720)
|++ ||.............. .+.+| .. ... ..+...+||.+||++||+
T Consensus 194 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~ 273 (287)
T cd07848 194 LSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPT 273 (287)
T ss_pred HHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcc
Confidence 999 6655433222111100 00000 00 000 122345999999999999
Q ss_pred CCCChHHHHcCccc
Q 004998 351 GRPKMGELLQSEFL 364 (720)
Q Consensus 351 ~Rpta~eiL~hp~~ 364 (720)
+|||++|+|+||||
T Consensus 274 ~R~s~~~~l~hp~f 287 (287)
T cd07848 274 DRYLTEQCLNHPAF 287 (287)
T ss_pred cCCCHHHHhcCCCC
Confidence 99999999999998
No 52
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=1.5e-32 Score=302.70 Aligned_cols=257 Identities=15% Similarity=0.225 Sum_probs=166.2
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++|||||++++ .+.+.. .+|+|||| .|++|.+++.+.. .+++..++.++.||+.||.|||++|
T Consensus 47 ~~~~E~~il~~l~h~~iv~l~~-~~~~~~---~~~lv~E~~~gg~L~~~l~~~~-~~~e~~~~~~~~qi~~aL~~LH~~g 121 (381)
T cd05626 47 HVKAERDILAEADNEWVVKLYY-SFQDKD---NLYFVMDYIPGGDMMSLLIRME-VFPEVLARFYIAELTLAIESVHKMG 121 (381)
T ss_pred HHHHHHHHHHhcCCCCeeeeEE-EEecCC---EEEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3446777999999999999999 555443 68999999 8999999995544 4899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.+++++|+|||++..+............. ..+. ....+... ..+..
T Consensus 122 ivHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~--------~~~~~---------- 181 (381)
T cd05626 122 FIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYYQKGS-HIRQ-DSMEPSDL--------WDDVS---------- 181 (381)
T ss_pred eeecCCcHHHEEECCCCCEEEeeCcCCcccccccccccccccc-cccc-cccCcccc--------ccccc----------
Confidence 9999999999999999999999999986543221100000000 0000 00000000 00000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
.+ ..+. ...+.. ...............+||+.|+|||++.+..++.++|||||||++
T Consensus 182 --~~-----~~~~-----------~~~~~~-----~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il 238 (381)
T cd05626 182 --NC-----RCGD-----------RLKTLE-----QRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVIL 238 (381)
T ss_pred --cc-----cccc-----------ccchhh-----ccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhHH
Confidence 00 0000 000000 000000000001235799999999999988899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhc--CCCCccccccCchHHHHHHHcC--CCCCCCCCChHHHHcCcccCCC
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRH--RVLPPQLLLKFPKEASFCLWLL--HPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~--~~~p~~~~~~~p~~~~li~~~L--~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|||++ ||............+.. ....+......+...+||.+|| ..+|..||++.++++||||...
T Consensus 239 ~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~hp~f~~~ 311 (381)
T cd05626 239 FEMLVGQPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKAHPFFSEV 311 (381)
T ss_pred HHHHhCCCCCcCCCHHHHHHHHHccccccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCcccCCC
Confidence 99999 67655443333322221 1111222233456679999855 5556669999999999999875
No 53
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=1.2e-32 Score=297.29 Aligned_cols=207 Identities=17% Similarity=0.245 Sum_probs=162.5
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|..++||||+++++ ++.... .+|+|||| .+++|.+++... ..+++.+++.++.||+.||+|||++|
T Consensus 41 ~~~~E~~~l~~l~hp~iv~~~~-~~~~~~---~~~lv~Ey~~~g~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~LH~~~ 115 (328)
T cd05593 41 HTLTESRVLKNTRHPFLTSLKY-SFQTKD---RLCFVMEYVNGGELFFHLSRE-RVFSEDRTRFYGAEIVSALDYLHSGK 115 (328)
T ss_pred HHHHHHHHHHhCCCCCCcceEE-EEEcCC---EEEEEEeCCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3446778999999999999998 555443 67999999 899999998544 35999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||++.......
T Consensus 116 ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~---------------------------------------------- 149 (328)
T cd05593 116 IVYRDLKLENLMLDKDGHIKITDFGLCKEGITDA---------------------------------------------- 149 (328)
T ss_pred eEecccCHHHeEECCCCcEEEecCcCCccCCCcc----------------------------------------------
Confidence 9999999999999999999999998873210000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......+||+.|+|||++.+..++.++|||||||++
T Consensus 150 --------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil 185 (328)
T cd05593 150 --------------------------------------------ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVM 185 (328)
T ss_pred --------------------------------------------cccccccCCcCccChhhhcCCCCCccCCccccchHH
Confidence 000114689999999999988899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCcccccc-CchHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCC
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLK-FPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 367 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~-~p~~~~li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~ 367 (720)
|||++ ||...... .....+..... .++.. .+...+|+.+||.+||.+|| ++.++++||||...
T Consensus 186 ~elltG~~Pf~~~~~~-~~~~~~~~~~~--~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~ 257 (328)
T cd05593 186 YEMMCGRLPFYNQDHE-KLFELILMEDI--KFPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSFFTGV 257 (328)
T ss_pred HHHhhCCCCCCCCCHH-HHHHHhccCCc--cCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence 99999 66554332 22223222111 12222 34556999999999999997 89999999999875
No 54
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=99.98 E-value=9.5e-33 Score=300.09 Aligned_cols=235 Identities=17% Similarity=0.231 Sum_probs=167.0
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..|..++..++||||+++++ .+.++. .+|+|||| .|++|.+++.+. ..+++..++.++.||+.||.|||++||+
T Consensus 49 ~~e~~~l~~~~~~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~gii 123 (350)
T cd05573 49 RAERDILADADSPWIVKLYY-SFQDEE---HLYLVMEYMPGGDLMNLLIRK-DVFPEETARFYIAELVLALDSVHKLGFI 123 (350)
T ss_pred HHHHHHHHhcCCCCccchhh-heecCC---eEEEEEcCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 35667899999999999999 454443 68999999 899999999655 4599999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.++|+|||++............... .+.... .
T Consensus 124 H~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~-------------------------~~~~~~--------~ 170 (350)
T cd05573 124 HRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYYLND-------------------------SHNLLF--------R 170 (350)
T ss_pred ccCCCHHHeEECCCCCEEeecCCCCccCcccCcccccccc-------------------------cccccc--------c
Confidence 9999999999999999999999998654332110000000 000000 0
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
.. ...................||+.|+|||++.+..++.++|||||||++||
T Consensus 171 ~~----------------------------~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~e 222 (350)
T cd05573 171 DN----------------------------VLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYE 222 (350)
T ss_pred cc----------------------------ccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhh
Confidence 00 00000000000111123579999999999999999999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhc---CCCCccccccCchHHHHHHHcCCCCCCCCCC-hHHHHcCcccCCC
Q 004998 304 LFC---PFSTGEEKTRTMSSLRH---RVLPPQLLLKFPKEASFCLWLLHPEPSGRPK-MGELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~---~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpt-a~eiL~hp~~~~~ 367 (720)
|++ ||....... ....+.. ....|......+...+||.+||. ||.+||+ +.++++||||...
T Consensus 223 ll~g~~Pf~~~~~~~-~~~~i~~~~~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp~~~~~ 291 (350)
T cd05573 223 MLYGFPPFYSDTLQE-TYNKIINWKESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSHPFFKGI 291 (350)
T ss_pred hccCCCCCCCCCHHH-HHHHHhccCCcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcCCCcCCC
Confidence 999 666555432 2233322 11112222234455699999997 9999999 9999999999875
No 55
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=99.98 E-value=2.2e-32 Score=293.04 Aligned_cols=211 Identities=16% Similarity=0.166 Sum_probs=152.0
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCC--------CCCCCHHHHHHHHHHHHHHHHH
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP--------KRSVDVYECLHIFRQIVEIVYA 136 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~--------~~~l~~~~~~~i~~QIl~aL~y 136 (720)
.+|..+|++++||||+++++ ++.... ...+|++|||.+++|.+++... ...+++..++.++.||+.||+|
T Consensus 46 ~~E~~~l~~l~h~niv~~~~-~~~~~~-~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~ 123 (317)
T cd07868 46 CREIALLRELKHPNVISLQK-VFLSHA-DRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHY 123 (317)
T ss_pred HHHHHHHHhcCCCCCcceee-eEecCC-CcEEEEEEeccCCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHH
Confidence 46888999999999999999 443322 2368999999888999988421 2248999999999999999999
Q ss_pred HHHcCceeccCCCCcEEE----ccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccccccccc
Q 004998 137 AHSQGIVVHNVRPSCFVM----SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQL 212 (720)
Q Consensus 137 LHs~gIvHrDLKP~NILl----~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgl 212 (720)
||++||+||||||+|||+ +..+.+||+|||++...+..... .
T Consensus 124 LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~--------------------------------~-- 169 (317)
T cd07868 124 LHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKP--------------------------------L-- 169 (317)
T ss_pred HHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceeccCCCCcc--------------------------------c--
Confidence 999999999999999999 45678999999887433211000 0
Q ss_pred ccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-CCCcc
Q 004998 213 VTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCA 291 (720)
Q Consensus 213 a~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~ 291 (720)
.......||+.|+|||++.+. .++.+
T Consensus 170 -----------------------------------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~ 196 (317)
T cd07868 170 -----------------------------------------------------ADLDPVVVTFWYRAPELLLGARHYTKA 196 (317)
T ss_pred -----------------------------------------------------cccCCccccccccCCHHHcCCCCcCch
Confidence 000114689999999999875 48999
Q ss_pred ccchhhhhhhhhccc---cCCCCchH--------HHHHHHhhc----------------------------CCCCc-c--
Q 004998 292 SDIYRLGVLLFELFC---PFSTGEEK--------TRTMSSLRH----------------------------RVLPP-Q-- 329 (720)
Q Consensus 292 sDIwSLGvll~eLlt---pf~~~~~~--------~~~~~~l~~----------------------------~~~p~-~-- 329 (720)
+|||||||++|||++ ||...... ...+..+.. ..... .
T Consensus 197 ~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (317)
T cd07868 197 IDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLI 276 (317)
T ss_pred hhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHHhcCCCChHHhHHHhhccchhhhhhhhhccccCccccc
Confidence 999999999999999 55422110 000000000 00000 0
Q ss_pred ------ccccCchHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004998 330 ------LLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 330 ------~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
.....+...+||.+||++||.+|||++|+|+||||
T Consensus 277 ~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07868 277 KYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF 317 (317)
T ss_pred chHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 00011234589999999999999999999999998
No 56
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=99.98 E-value=4.8e-32 Score=308.05 Aligned_cols=219 Identities=19% Similarity=0.247 Sum_probs=168.6
Q ss_pred eeeeehhhhcccCCCCCceecccceeecCC----CCCcEEEEEec-CCCCHHHHHhC---CCCCCCHHHHHHHHHHHHHH
Q 004998 62 LRKHSDGVELTHGDHLRNQGGLSGVCENEA----AIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIVEI 133 (720)
Q Consensus 62 ~r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~----~~~~~~lv~E~-~ggsL~~~L~~---~~~~l~~~~~~~i~~QIl~a 133 (720)
.+..+|..+|..++|+||+++++.+..... ....+++|||| .+++|.++|.. ....+++..+..++.||+.|
T Consensus 76 ~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~a 155 (496)
T PTZ00283 76 NRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLA 155 (496)
T ss_pred HHHHHHHHHHhcCCCCcEEEeecceecccccCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHH
Confidence 345578888999999999999884432221 12247899999 99999999943 23468999999999999999
Q ss_pred HHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccc
Q 004998 134 VYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLV 213 (720)
Q Consensus 134 L~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla 213 (720)
|.|||++||+||||||+|||++.++.+||+|||+++........ +
T Consensus 156 L~~lH~~~IiHrDLKP~NILl~~~~~vkL~DFGls~~~~~~~~~-------------------------------~---- 200 (496)
T PTZ00283 156 VHHVHSKHMIHRDIKSANILLCSNGLVKLGDFGFSKMYAATVSD-------------------------------D---- 200 (496)
T ss_pred HHHHHhCCEecCCCCHHHEEEeCCCCEEEEecccCeeccccccc-------------------------------c----
Confidence 99999999999999999999999999999999987443211000 0
Q ss_pred cCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCcccc
Q 004998 214 TAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASD 293 (720)
Q Consensus 214 ~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sD 293 (720)
.....+||+.|+|||++.+..++.++|
T Consensus 201 -----------------------------------------------------~~~~~~Gt~~Y~aPE~~~~~~~s~k~D 227 (496)
T PTZ00283 201 -----------------------------------------------------VGRTFCGTPYYVAPEIWRRKPYSKKAD 227 (496)
T ss_pred -----------------------------------------------------ccccccCCcceeCHHHhCCCCCCcHHH
Confidence 001146899999999999988999999
Q ss_pred chhhhhhhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004998 294 IYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 294 IwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
||||||++|||++ ||...... ..+..+..+..++......+...+|+.+||+.||.+||++.++++|||++....
T Consensus 228 VwSlGvilyeLltG~~Pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~p~~~~~~~ 305 (496)
T PTZ00283 228 MFSLGVLLYELLTLKRPFDGENME-EVMHKTLAGRYDPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNMPICKLFIS 305 (496)
T ss_pred HHHHHHHHHHHHHCCCCCCCCCHH-HHHHHHhcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhCHHHHHhhh
Confidence 9999999999999 77655443 333333333333332333455669999999999999999999999999886533
No 57
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=99.98 E-value=1.5e-32 Score=295.86 Aligned_cols=204 Identities=19% Similarity=0.273 Sum_probs=161.8
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..++..++||||+++++ ++.... .+|+|||| .+++|.+++.+.. .+++..++.++.||+.||.|||++||+
T Consensus 43 ~~E~~~l~~l~hp~i~~~~~-~~~~~~---~~~lv~E~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~iv 117 (323)
T cd05595 43 VTESRVLQNTRHPFLTALKY-AFQTHD---RLCFVMEYANGGELFFHLSRER-VFTEERARFYGAEIVSALEYLHSRDVV 117 (323)
T ss_pred HHHHHHHHhCCCCCCcceee-EEecCC---EEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeE
Confidence 36778999999999999999 554443 68999999 8999999985443 589999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.+||+|||++........
T Consensus 118 H~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~----------------------------------------------- 150 (323)
T cd05595 118 YRDIKLENLMLDKDGHIKITDFGLCKEGISDGA----------------------------------------------- 150 (323)
T ss_pred ecCCCHHHEEEcCCCCEEecccHHhccccCCCC-----------------------------------------------
Confidence 999999999999999999999988732100000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......||+.|+|||++.+..++.++|||||||++||
T Consensus 151 -------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~e 187 (323)
T cd05595 151 -------------------------------------------TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYE 187 (323)
T ss_pred -------------------------------------------ccccccCCcCcCCcccccCCCCCchhchhhhHHHHHH
Confidence 0001368999999999998889999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcC--CCCccccccCchHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCC
Q 004998 304 LFC---PFSTGEEKTRTMSSLRHR--VLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~--~~p~~~~~~~p~~~~li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~ 367 (720)
|++ ||...... .....+... .+|. ...+...+||.+||.+||.+|| ++.++++||||...
T Consensus 188 ll~g~~Pf~~~~~~-~~~~~~~~~~~~~p~---~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h~~~~~~ 257 (323)
T cd05595 188 MMCGRLPFYNQDHE-RLFELILMEEIRFPR---TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSI 257 (323)
T ss_pred HHhCCCCCCCCCHH-HHHHHHhcCCCCCCC---CCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcCCCcCCC
Confidence 999 66654433 222222221 1222 2234556999999999999998 89999999999985
No 58
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=99.98 E-value=1.3e-32 Score=301.07 Aligned_cols=240 Identities=18% Similarity=0.262 Sum_probs=163.8
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..++.+++||||+++++ .+.+.. .+|+|||| .|++|.+++.+.+ .+++.+++.++.||+.||+|||++||+
T Consensus 49 ~~E~~il~~~~~~~iv~~~~-~~~~~~---~~~lv~E~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~lH~~giv 123 (363)
T cd05628 49 RAERDILVEADSLWVVKMFY-SFQDKL---NLYLIMEFLPGGDMMTLLMKKD-TLTEEETQFYIAETVLAIDSIHQLGFI 123 (363)
T ss_pred HHHHHHHHhCCCCCcceEEE-EEecCC---eEEEEEcCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeE
Confidence 35677899999999999999 555543 67999999 8999999995543 599999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.+||+|||++............... ....+ .++.+.......
T Consensus 124 HrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~~~~~~-------~~~~~------------~~~~~~~~~~~~---- 180 (363)
T cd05628 124 HRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNL-------NHSLP------------SDFTFQNMNSKR---- 180 (363)
T ss_pred ecCCCHHHeEECCCCCEEEeeccCcccccccccccccccc-------ccccc------------cccccccccccc----
Confidence 9999999999999999999999998654221100000000 00000 111000000000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
.. +.............+||+.|+|||++.+..++.++|||||||++||
T Consensus 181 -----------------------~~---------~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~e 228 (363)
T cd05628 181 -----------------------KA---------ETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYE 228 (363)
T ss_pred -----------------------cc---------chhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHH
Confidence 00 0000000000112579999999999999889999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcC----CCCccccccCchHHHHHHHcCCCCCC---CCCChHHHHcCcccCCC
Q 004998 304 LFC---PFSTGEEKTRTMSSLRHR----VLPPQLLLKFPKEASFCLWLLHPEPS---GRPKMGELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~----~~p~~~~~~~p~~~~li~~~L~~dP~---~Rpta~eiL~hp~~~~~ 367 (720)
|++ ||...... ..+..+... .+|+. ....+...+|+.+|+. +|. .||+++||++||||...
T Consensus 229 ll~G~~Pf~~~~~~-~~~~~i~~~~~~~~~p~~-~~~s~~~~~li~~l~~-~~~~r~~r~~~~ei~~hp~f~~~ 299 (363)
T cd05628 229 MLIGYPPFCSETPQ-ETYKKVMNWKETLIFPPE-VPISEKAKDLILRFCC-EWEHRIGAPGVEEIKTNPFFEGV 299 (363)
T ss_pred HHhCCCCCCCCCHH-HHHHHHHcCcCcccCCCc-CCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhCCCCCCCC
Confidence 999 66654433 333333321 12222 2234556699998765 444 45899999999999986
No 59
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.98 E-value=3.2e-32 Score=297.48 Aligned_cols=212 Identities=19% Similarity=0.230 Sum_probs=158.1
Q ss_pred eeeehhhhcccCCCCCceecccceeecCC---CCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEA---AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~---~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
+..+|..++..++||||+++++ ++.... ....+|++|||.+++|.+++.. .+++..+..++.||+.||.|||+
T Consensus 66 ~~~~E~~~l~~l~h~niv~~~~-~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~---~~~~~~~~~~~~qi~~~L~~LH~ 141 (359)
T cd07876 66 RAYRELVLLKCVNHKNIISLLN-VFTPQKSLEEFQDVYLVMELMDANLCQVIHM---ELDHERMSYLLYQMLCGIKHLHS 141 (359)
T ss_pred HHHHHHHHHHhCCCCCEeeeee-eeccCCCccccceeEEEEeCCCcCHHHHHhc---cCCHHHHHHHHHHHHHHHHHHHh
Confidence 3447788999999999999999 443332 2235799999977788887732 38899999999999999999999
Q ss_pred cCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004998 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||+||||||+|||++.++.+||+|||++...... +
T Consensus 142 ~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~~~-----------------------------------~--------- 177 (359)
T cd07876 142 AGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTN-----------------------------------F--------- 177 (359)
T ss_pred CCcccCCCCHHHEEECCCCCEEEecCCCccccccC-----------------------------------c---------
Confidence 99999999999999999999999999887321100 0
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhh
Q 004998 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
......||+.|+|||++.+..++.++|||||||
T Consensus 178 -----------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~ 210 (359)
T cd07876 178 -----------------------------------------------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 210 (359)
T ss_pred -----------------------------------------------cCCCCcccCCCCCchhccCCCCCcchhhHHHHH
Confidence 001136799999999999988999999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhh----------------------c-CCCCcc----cc-------------ccCch
Q 004998 300 LLFELFC---PFSTGEEKTRTMSSLR----------------------H-RVLPPQ----LL-------------LKFPK 336 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~----------------------~-~~~p~~----~~-------------~~~p~ 336 (720)
++|+|++ ||...+........+. . ...+.. .. ...+.
T Consensus 211 il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (359)
T cd07876 211 IMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQ 290 (359)
T ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchh
Confidence 9999999 6654432211110000 0 000000 00 01133
Q ss_pred HHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004998 337 EASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 337 ~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
..+||.+||.+||++|||+.|+|+||||.....
T Consensus 291 ~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~~~ 323 (359)
T cd07876 291 ARDLLSKMLVIDPDKRISVDEALRHPYITVWYD 323 (359)
T ss_pred HHHHHHHHhccCcccCCCHHHHhcCchhhhhcC
Confidence 459999999999999999999999999986433
No 60
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.98 E-value=1.6e-32 Score=293.72 Aligned_cols=229 Identities=21% Similarity=0.253 Sum_probs=168.3
Q ss_pred CCccccccccccCCCC-ccceeeeehhhhcccCC-CCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCH
Q 004998 43 RLLRGERFGVRGDDSN-DFELRKHSDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDV 120 (720)
Q Consensus 43 ~~~~~~~~~~~~~~~~-~~~~r~~~e~~~Ls~l~-HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~ 120 (720)
+..+.+++++.+.+.+ -..|+ .|+..|.+|. |.+||+||+ |+-. ...+|+||||+..+|..+|++....++.
T Consensus 386 ~iyalkkv~~~~~D~qtl~gy~--nEI~lL~KLkg~~~IIqL~D--YEv~--d~~lYmvmE~Gd~DL~kiL~k~~~~~~~ 459 (677)
T KOG0596|consen 386 QIYALKKVVLLEADNQTLDGYR--NEIALLNKLKGHDKIIQLYD--YEVT--DGYLYMVMECGDIDLNKILKKKKSIDPD 459 (677)
T ss_pred cchhhhHHHHhhcCHHHHHHHH--HHHHHHHHhcCCceEEEEee--eecc--CceEEEEeecccccHHHHHHhccCCCch
Confidence 3344455544433221 23334 4555777754 999999999 3333 2368999999999999999887776776
Q ss_pred HHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHh
Q 004998 121 YECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQ 200 (720)
Q Consensus 121 ~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (720)
..++.|..|++.+|.++|.+||||.||||.|||+- .|.+||||||+|.....+..
T Consensus 460 ~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlV-kG~LKLIDFGIA~aI~~DTT------------------------ 514 (677)
T KOG0596|consen 460 WFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLV-KGRLKLIDFGIANAIQPDTT------------------------ 514 (677)
T ss_pred HHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEE-eeeEEeeeechhcccCcccc------------------------
Confidence 79999999999999999999999999999999995 68999999998854332210
Q ss_pred hhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCC
Q 004998 201 RRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASP 280 (720)
Q Consensus 201 ~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~AP 280 (720)
.+ -....+||+.||+|
T Consensus 515 ---------------------------------------------sI-------------------~kdsQvGT~NYMsP 530 (677)
T KOG0596|consen 515 ---------------------------------------------SI-------------------VKDSQVGTVNYMSP 530 (677)
T ss_pred ---------------------------------------------ce-------------------eeccccCcccccCH
Confidence 00 01125899999999
Q ss_pred ccccCCC-----------CCccccchhhhhhhhhccc---cCCCCchHHHHHHHhhcC---CCCccccccCchHHHHHHH
Q 004998 281 EELAGAP-----------VSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHR---VLPPQLLLKFPKEASFCLW 343 (720)
Q Consensus 281 E~l~~~~-----------~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~---~~p~~~~~~~p~~~~li~~ 343 (720)
|.+.... .+.+|||||||||||+|+. ||........-+..|... +.-|.....++ ..++++.
T Consensus 531 EAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~aKl~aI~~P~~~Iefp~~~~~~~-li~~mK~ 609 (677)
T KOG0596|consen 531 EALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQIAKLHAITDPNHEIEFPDIPENDE-LIDVMKC 609 (677)
T ss_pred HHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHHHHHHHhhcCCCccccccCCCCchH-HHHHHHH
Confidence 9985322 5689999999999999998 666554444444444432 12222333332 5699999
Q ss_pred cCCCCCCCCCChHHHHcCcccCCC
Q 004998 344 LLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 344 ~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
||.+||.+||++.++|+|||++..
T Consensus 610 CL~rdPkkR~si~eLLqhpFl~~~ 633 (677)
T KOG0596|consen 610 CLARDPKKRWSIPELLQHPFLQIQ 633 (677)
T ss_pred HHhcCcccCCCcHHHhcCcccccc
Confidence 999999999999999999999985
No 61
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=99.98 E-value=2.4e-32 Score=294.41 Aligned_cols=208 Identities=18% Similarity=0.250 Sum_probs=162.3
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH-c
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-Q 140 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs-~ 140 (720)
+...|..++..++||||+++++ ++.... .+|+|||| .+++|.+++... ..+++..++.++.||+.||.|||+ .
T Consensus 41 ~~~~e~~~l~~~~hp~i~~~~~-~~~~~~---~~~lv~E~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~lH~~~ 115 (325)
T cd05594 41 HTLTENRVLQNSRHPFLTALKY-SFQTHD---RLCFVMEYANGGELFFHLSRE-RVFSEDRARFYGAEIVSALDYLHSEK 115 (325)
T ss_pred HHHHHHHHHHhCCCCCCCceEE-EEEcCC---EEEEEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhcC
Confidence 3446777899999999999998 554443 68999999 899999988544 359999999999999999999998 7
Q ss_pred CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004998 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+|||++.++.+||+|||++....... .
T Consensus 116 ~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~---------------------------------~----------- 151 (325)
T cd05594 116 NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG---------------------------------A----------- 151 (325)
T ss_pred CEEecCCCCCeEEECCCCCEEEecCCCCeecCCCC---------------------------------c-----------
Confidence 99999999999999999999999998873211000 0
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhh
Q 004998 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
......||+.|+|||++.+..++.++|||||||+
T Consensus 152 ----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~i 185 (325)
T cd05594 152 ----------------------------------------------TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVV 185 (325)
T ss_pred ----------------------------------------------ccccccCCcccCCHHHHccCCCCCccccccccce
Confidence 0001368999999999998889999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCC
Q 004998 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 367 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~ 367 (720)
+|||++ ||...... .....+...... ......+...+|+.+||.+||.+|+ ++.++++||||...
T Consensus 186 l~el~tG~~Pf~~~~~~-~~~~~i~~~~~~-~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~ 258 (325)
T cd05594 186 MYEMMCGRLPFYNQDHE-KLFELILMEEIR-FPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKFFAGI 258 (325)
T ss_pred eeeeccCCCCCCCCCHH-HHHHHHhcCCCC-CCCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcCCCcCCC
Confidence 999999 66554332 233333222111 1112335556999999999999996 89999999999885
No 62
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=99.98 E-value=1.2e-32 Score=303.49 Aligned_cols=255 Identities=15% Similarity=0.198 Sum_probs=167.6
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..+|++++|||||++++ .+.++. .+|+|||| .|++|.+++.+.+ .+++..++.++.||+.||+|||++||
T Consensus 48 ~~~E~~il~~~~h~~iv~~~~-~~~~~~---~~~lv~E~~~gg~L~~~l~~~~-~~~e~~~~~~~~qi~~al~~lH~~~i 122 (382)
T cd05625 48 VKAERDILAEADNEWVVRLYY-SFQDKD---NLYFVMDYIPGGDMMSLLIRMG-IFPEDLARFYIAELTCAVESVHKMGF 122 (382)
T ss_pred HHHHHHHHHhCCCCcCCeEEE-EEEeCC---EEEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 336777999999999999999 555443 68999999 8999999995543 48999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.+||+|||++..+............ +. .+ ....+|.... . ..
T Consensus 123 vHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~~~~~~-------------~~--~~--~~~~~~~~~~--~---~~ 180 (382)
T cd05625 123 IHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQSG-------------DH--VR--QDSMDFSNEW--G---DP 180 (382)
T ss_pred ecCCCCHHHEEECCCCCEEEeECCCCccccccccccccccc-------------cc--cc--cccccccccc--c---cc
Confidence 99999999999999999999999998654221100000000 00 00 0000110000 0 00
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
..+. .+.. .. ....... ...........+||+.|+|||++.+..++.++|||||||++|
T Consensus 181 ~~~~-----~~~~--~~-------------~~~~~~~-~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~ 239 (382)
T cd05625 181 ANCR-----CGDR--LK-------------PLERRAA-RQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILY 239 (382)
T ss_pred cccc-----cccc--cc-------------chhhhhc-cccccccccccccCcccCCHHHhcCCCCCCeeeEEechHHHH
Confidence 0000 0000 00 0000000 000000112257999999999999988999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhc--CCCCccccccCchHHHHHHHcCCCCCCCCCC---hHHHHcCcccCCC
Q 004998 303 ELFC---PFSTGEEKTRTMSSLRH--RVLPPQLLLKFPKEASFCLWLLHPEPSGRPK---MGELLQSEFLNEP 367 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~--~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpt---a~eiL~hp~~~~~ 367 (720)
||++ ||............+.. ....|......+...+||.+|+ .+|.+|++ +.++++||||...
T Consensus 240 elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~hp~f~~~ 311 (382)
T cd05625 240 EMLVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKAHPFFKTI 311 (382)
T ss_pred HHHhCCCCCCCCCHHHHHHHHHccCCCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhcCCCcCCc
Confidence 9999 67665544333333321 1111222234456669999987 59999987 9999999999875
No 63
>PHA03212 serine/threonine kinase US3; Provisional
Probab=99.98 E-value=2.8e-32 Score=301.29 Aligned_cols=212 Identities=16% Similarity=0.174 Sum_probs=158.2
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.+|+.+|++++|||||++++ ++.... ..+++||+.+++|.+++.... .+++.+++.|+.||+.||.|||++||||
T Consensus 131 ~~E~~il~~l~HpnIv~~~~-~~~~~~---~~~lv~e~~~~~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~ylH~~~IvH 205 (391)
T PHA03212 131 ATEAHILRAINHPSIIQLKG-TFTYNK---FTCLILPRYKTDLYCYLAAKR-NIAICDILAIERSVLRAIQYLHENRIIH 205 (391)
T ss_pred HHHHHHHHhCCCCCCCCEeE-EEEECC---eeEEEEecCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 36888999999999999999 554443 579999997789999985543 4899999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+|||++.++.+||+|||++....... .
T Consensus 206 rDiKP~NIll~~~~~vkL~DFG~a~~~~~~~---------------------------------~--------------- 237 (391)
T PHA03212 206 RDIKAENIFINHPGDVCLGDFGAACFPVDIN---------------------------------A--------------- 237 (391)
T ss_pred CCCChHhEEEcCCCCEEEEeCCccccccccc---------------------------------c---------------
Confidence 9999999999999999999998873210000 0
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhc
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 304 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eL 304 (720)
.......||+.|+|||++.+..++.++|||||||++|||
T Consensus 238 -----------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~el 276 (391)
T PHA03212 238 -----------------------------------------NKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEM 276 (391)
T ss_pred -----------------------------------------cccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHH
Confidence 000114689999999999988899999999999999999
Q ss_pred cc---cCCCCc------hHHHHHHHhhc--CCCCcc-----------------------------c--cccCc-hHHHHH
Q 004998 305 FC---PFSTGE------EKTRTMSSLRH--RVLPPQ-----------------------------L--LLKFP-KEASFC 341 (720)
Q Consensus 305 lt---pf~~~~------~~~~~~~~l~~--~~~p~~-----------------------------~--~~~~p-~~~~li 341 (720)
++ ||.... .....+..+.. +..|.. + ....| ...+||
T Consensus 277 ltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li 356 (391)
T PHA03212 277 ATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLI 356 (391)
T ss_pred HHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHH
Confidence 98 333211 00001111100 000000 0 00112 344899
Q ss_pred HHcCCCCCCCCCChHHHHcCcccCCCccc
Q 004998 342 LWLLHPEPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 342 ~~~L~~dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
.+||++||.+|||+.|+|+||||.....+
T Consensus 357 ~~mL~~dP~~Rpta~elL~hp~f~~~~~~ 385 (391)
T PHA03212 357 CKMLAFDAHHRPSAEALLDFAAFQDIPDP 385 (391)
T ss_pred HHHhcCChhhCCCHHHHhcChhhccCCCC
Confidence 99999999999999999999999886443
No 64
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=99.98 E-value=2.9e-32 Score=298.33 Aligned_cols=244 Identities=16% Similarity=0.218 Sum_probs=165.2
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..+|..++||||+++++ .+.++. .+|+|||| .|++|.+++...+ .+++..++.|+.||+.||+|||++||+
T Consensus 49 ~~E~~il~~l~h~~iv~~~~-~~~~~~---~~~lv~E~~~~g~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~lH~~~iv 123 (364)
T cd05599 49 RAERDILAEADNPWVVKLYY-SFQDEN---YLYLIMEYLPGGDMMTLLMKKD-TFTEEETRFYIAETILAIDSIHKLGYI 123 (364)
T ss_pred HHHHHHHHhCCCCCCcceEE-EEEcCC---eEEEEECCCCCcHHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeE
Confidence 35777999999999999999 555543 67999999 8999999995544 499999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.++|+|||++.............. .....+.+. .++........
T Consensus 124 H~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~-------~~~~~~~~~---------~~~~~~~~~~~----- 182 (364)
T cd05599 124 HRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFYRI-------LSHALPSNF---------LDFISKPMSSK----- 182 (364)
T ss_pred eccCCHHHeEECCCCCEEEeecccceecccccccccccc-------ccccccccc---------ccccccccccc-----
Confidence 999999999999999999999999865322110000000 000000000 00000000000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
...+.............+||+.|+|||++.+..++.++|||||||++||
T Consensus 183 -------------------------------~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~e 231 (364)
T cd05599 183 -------------------------------RKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYE 231 (364)
T ss_pred -------------------------------ccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHH
Confidence 0000000000000012479999999999998889999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCCCC---ccccccCchHHHHHHHcCCCCCCCCCC---hHHHHcCcccCCC
Q 004998 304 LFC---PFSTGEEKTRTMSSLRHRVLP---PQLLLKFPKEASFCLWLLHPEPSGRPK---MGELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~~~p---~~~~~~~p~~~~li~~~L~~dP~~Rpt---a~eiL~hp~~~~~ 367 (720)
|++ ||...... .....+...... +......+...+||.+||. +|.+|++ +.++++||||...
T Consensus 232 l~~G~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h~~~~~~ 302 (364)
T cd05599 232 MLVGYPPFCSDNPQ-ETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSHPFFKGV 302 (364)
T ss_pred hhcCCCCCCCCCHH-HHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcCCCcCCC
Confidence 999 66554443 233333222111 1111223455699999996 9999997 9999999999986
No 65
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=99.98 E-value=4.1e-32 Score=292.77 Aligned_cols=232 Identities=20% Similarity=0.245 Sum_probs=179.7
Q ss_pred cccccccccC-----CCCCCccccccccccCCCCccceeeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-C
Q 004998 30 RALNISGVSD-----RNPRLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-G 103 (720)
Q Consensus 30 ~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ 103 (720)
|.+|.+-|+. +++....+.+....|..+... |. +|+.+|.+|+|+|||++|+ ++..+. .+|||||| .
T Consensus 212 ~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m~~~~-f~--~Ea~iMk~L~H~~lV~l~g-V~~~~~---piyIVtE~m~ 284 (468)
T KOG0197|consen 212 RELGSGQFGEVWLGKWNGSTKVAVKTIKEGSMSPEA-FL--REAQIMKKLRHEKLVKLYG-VCTKQE---PIYIVTEYMP 284 (468)
T ss_pred HHhcCCccceEEEEEEcCCCcccceEEeccccChhH-HH--HHHHHHHhCcccCeEEEEE-EEecCC---ceEEEEEecc
Confidence 4566666665 666655555555555444332 22 7888999999999999999 554443 68999999 9
Q ss_pred CCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCccccccc
Q 004998 104 DVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNT 182 (720)
Q Consensus 104 ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~ 182 (720)
.|+|.+||+. .+..++..+.+.++.||++|++||+++++|||||-..|||+++++.+||+|||+++..+.+...
T Consensus 285 ~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~----- 359 (468)
T KOG0197|consen 285 KGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYT----- 359 (468)
T ss_pred cCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCceEEEcccccccccCCCcee-----
Confidence 9999999965 5666999999999999999999999999999999999999999999999988888643332111
Q ss_pred ccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccC
Q 004998 183 QNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQ 262 (720)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~ 262 (720)
.....
T Consensus 360 ---------------------------------------------------------------------------~~~~~ 364 (468)
T KOG0197|consen 360 ---------------------------------------------------------------------------ASEGG 364 (468)
T ss_pred ---------------------------------------------------------------------------ecCCC
Confidence 00112
Q ss_pred CCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHH
Q 004998 263 PFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEA 338 (720)
Q Consensus 263 ~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~ 338 (720)
.+| ..|.|||.+....++.+||||||||+||||+| ||+..... +....+..+..-|.... +|...
T Consensus 365 kfP---------IkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~-ev~~~le~GyRlp~P~~-CP~~v 433 (468)
T KOG0197|consen 365 KFP---------IKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNE-EVLELLERGYRLPRPEG-CPDEV 433 (468)
T ss_pred CCC---------ceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHH-HHHHHHhccCcCCCCCC-CCHHH
Confidence 233 34899999999999999999999999999999 66665444 66777777665555443 55554
Q ss_pred -HHHHHcCCCCCCCCCChHHHH
Q 004998 339 -SFCLWLLHPEPSGRPKMGELL 359 (720)
Q Consensus 339 -~li~~~L~~dP~~Rpta~eiL 359 (720)
+++..||+.+|++|||.+.+.
T Consensus 434 Y~lM~~CW~~~P~~RPtF~~L~ 455 (468)
T KOG0197|consen 434 YELMKSCWHEDPEDRPTFETLR 455 (468)
T ss_pred HHHHHHHhhCCcccCCCHHHHH
Confidence 999999999999999998554
No 66
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=99.98 E-value=2.6e-32 Score=294.61 Aligned_cols=209 Identities=16% Similarity=0.190 Sum_probs=161.7
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..++..++||||+++++ ++.+.. .+|+|||| .|++|.+++.+....+++..++.++.||+.||.|||++||
T Consensus 48 ~~~e~~i~~~~~~~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i 123 (330)
T cd05601 48 FEEERDILSISNSPWIPQLQY-AFQDKD---NLYLVMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGY 123 (330)
T ss_pred HHHHHHHHHhCCCCCCcceee-EEecCC---eEEEEECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 346677888999999999998 555443 57999999 8999999996655569999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.+||+|||++.........
T Consensus 124 ~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~--------------------------------------------- 158 (330)
T cd05601 124 VHRDIKPENVLIDRTGHIKLADFGSAARLTANKMV--------------------------------------------- 158 (330)
T ss_pred EcccCchHheEECCCCCEEeccCCCCeECCCCCce---------------------------------------------
Confidence 99999999999999999999999887432111000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCcccc------CCCCCccccchh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA------GAPVSCASDIYR 296 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~------~~~~s~~sDIwS 296 (720)
......||+.|+|||++. +..++.++||||
T Consensus 159 --------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Diws 194 (330)
T cd05601 159 --------------------------------------------NSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWS 194 (330)
T ss_pred --------------------------------------------eeecccCCccccCHHHhccccccccCCCCCcceeec
Confidence 001136899999999986 445789999999
Q ss_pred hhhhhhhccc---cCCCCchHHHHHHHhhcCCC---CccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 297 LGVLLFELFC---PFSTGEEKTRTMSSLRHRVL---PPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 297 LGvll~eLlt---pf~~~~~~~~~~~~l~~~~~---p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|||++|||++ ||...... ..+..+..... .+......+...+|+.+||. +|.+|||+.++++||||...
T Consensus 195 lG~il~el~~g~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h~~~~~~ 269 (330)
T cd05601 195 LGVIAYEMIYGRSPFHEGTSA-KTYNNIMNFQRFLKFPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCHPFFSKI 269 (330)
T ss_pred ccceeeeeccCCCCCCCCCHH-HHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCCCCcCCC
Confidence 9999999999 67654443 23333332211 11112233455699999998 99999999999999999875
No 67
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=99.98 E-value=1.3e-32 Score=295.92 Aligned_cols=204 Identities=16% Similarity=0.247 Sum_probs=159.4
Q ss_pred ehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 66 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.|..++..+ +||||+++++ ++.... .+|+|||| .|++|.+++.+.. .+++..++.++.||+.||.|||++||+
T Consensus 44 ~e~~~l~~~~~h~~iv~~~~-~~~~~~---~~~iv~Ey~~~g~L~~~i~~~~-~l~~~~~~~~~~ql~~~L~~lH~~~iv 118 (320)
T cd05590 44 TEKRILSLARNHPFLTQLYC-CFQTPD---RLFFVMEFVNGGDLMFHIQKSR-RFDEARARFYAAEITSALMFLHDKGII 118 (320)
T ss_pred HHHHHHHhccCCCchhceee-EEEcCC---EEEEEEcCCCCchHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeE
Confidence 455556554 7999999999 555443 57999999 8999999995543 499999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.++|+|||++....... .
T Consensus 119 H~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~---------------------------------~-------------- 151 (320)
T cd05590 119 YRDLKLDNVLLDHEGHCKLADFGMCKEGIFNG---------------------------------K-------------- 151 (320)
T ss_pred eCCCCHHHeEECCCCcEEEeeCCCCeecCcCC---------------------------------C--------------
Confidence 99999999999999999999998873210000 0
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......||+.|+|||++.+..++.++|||||||++||
T Consensus 152 -------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e 188 (320)
T cd05590 152 -------------------------------------------TTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYE 188 (320)
T ss_pred -------------------------------------------cccccccCccccCHHHHcCCCCCCccchhhhHHHHHH
Confidence 0011468999999999998889999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCCCCccccc-cCchHHHHHHHcCCCCCCCCCCh------HHHHcCcccCCC
Q 004998 304 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPKM------GELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~~~p~~~~~-~~p~~~~li~~~L~~dP~~Rpta------~eiL~hp~~~~~ 367 (720)
|++ ||...... .....+...... ++. ..+...+|+.+||+.||.+||++ +++++||||...
T Consensus 189 l~~g~~Pf~~~~~~-~~~~~i~~~~~~--~~~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h~~f~~~ 259 (320)
T cd05590 189 MLCGHAPFEAENED-DLFEAILNDEVV--YPTWLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHPFFKEL 259 (320)
T ss_pred HhhCCCCCCCCCHH-HHHHHHhcCCCC--CCCCCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcCCCcCCC
Confidence 999 67655443 333334332211 112 23445599999999999999998 999999999875
No 68
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=99.98 E-value=2.5e-32 Score=296.34 Aligned_cols=210 Identities=15% Similarity=0.196 Sum_probs=158.6
Q ss_pred eeehhhhcccCCCCCceecccceeecC--CCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENE--AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~--~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
..+|..+|.+++||||+++++++.... .....+|++||+.+++|.+++.. ..+++..++.++.||+.||.|||++|
T Consensus 61 ~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~ 138 (343)
T cd07878 61 TYRELRLLKHMKHENVIGLLDVFTPATSIENFNEVYLVTNLMGADLNNIVKC--QKLSDEHVQFLIYQLLRGLKYIHSAG 138 (343)
T ss_pred HHHHHHHHHhcCCCchhhhhhhhcccccccccCcEEEEeecCCCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 346888999999999999999433221 22345799999999999998853 24999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||++......
T Consensus 139 ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~----------------------------------------------- 171 (343)
T cd07878 139 IIHRDLKPSNVAVNEDCELRILDFGLARQADDE----------------------------------------------- 171 (343)
T ss_pred eecccCChhhEEECCCCCEEEcCCccceecCCC-----------------------------------------------
Confidence 999999999999999999999988877321100
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-CCCCccccchhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVL 300 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sDIwSLGvl 300 (720)
....+||++|+|||++.+ ..++.++|||||||+
T Consensus 172 ----------------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~i 205 (343)
T cd07878 172 ----------------------------------------------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 205 (343)
T ss_pred ----------------------------------------------cCCccccccccCchHhcCCccCCchhhhHhHHHH
Confidence 001367999999999977 458999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhc--CCC-----------------------Cc-----cccccCchHHHHHHHcCCC
Q 004998 301 LFELFC---PFSTGEEKTRTMSSLRH--RVL-----------------------PP-----QLLLKFPKEASFCLWLLHP 347 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~--~~~-----------------------p~-----~~~~~~p~~~~li~~~L~~ 347 (720)
+|+|++ ||........ ...+.. +.. +. .+....+...+|+.+||++
T Consensus 206 l~el~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~ 284 (343)
T cd07878 206 MAELLKGKALFPGNDYIDQ-LKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVL 284 (343)
T ss_pred HHHHHHCCCCCCCCCHHHH-HHHHHHHhCCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCC
Confidence 999999 5654332211 111110 000 00 0111223445999999999
Q ss_pred CCCCCCChHHHHcCcccCCCcc
Q 004998 348 EPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 348 dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
||.+|||+.|+|+||||.....
T Consensus 285 dp~~R~s~~ell~hp~~~~~~~ 306 (343)
T cd07878 285 DSDKRISASEALAHPYFSQYHD 306 (343)
T ss_pred ChhhCCCHHHHhcCcchhccCC
Confidence 9999999999999999987644
No 69
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=99.97 E-value=2.1e-32 Score=300.87 Aligned_cols=250 Identities=12% Similarity=0.162 Sum_probs=165.5
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..+|.+++||||+++++ .+.++. .+|+|||| .|++|.+++.+.+ .+++..++.++.||+.||+|||++||+
T Consensus 49 ~~E~~il~~l~h~~iv~~~~-~~~~~~---~~~lv~E~~~~g~L~~~i~~~~-~~~~~~~~~~~~qi~~al~~lH~~~iv 123 (376)
T cd05598 49 KAERDILAEADNEWVVKLYY-SFQDKD---NLYFVMDYIPGGDMMSLLIRLG-IFEEDLARFYIAELTCAIESVHKMGFI 123 (376)
T ss_pred HHHHHHHHhCCCCCcceEEE-EEEcCC---EEEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeE
Confidence 36778999999999999999 555443 68999999 8999999995544 489999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.++|+|||+|..+........+.. .+. .. .......
T Consensus 124 HrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~~~~~-------------------------~~~--~~--~~~~~~~ 174 (376)
T cd05598 124 HRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQK-------------------------GDH--HR--QDSMEPS 174 (376)
T ss_pred eCCCCHHHEEECCCCCEEEEeCCCCcccccccccccccc-------------------------ccc--cc--ccccccc
Confidence 999999999999999999999999854421110000000 000 00 0000000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
........ ... ...................+||+.|+|||++.+..++.++|||||||++||
T Consensus 175 ~~~~~~~~-------------~~~-----~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilye 236 (376)
T cd05598 175 EEWSEIDR-------------CRL-----KPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYE 236 (376)
T ss_pred cccccccc-------------ccc-----cchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeee
Confidence 00000000 000 000000000000011123589999999999999889999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhc--CCCCccccccCchHHHHHHHcCCCCCCCCC---ChHHHHcCcccCCC
Q 004998 304 LFC---PFSTGEEKTRTMSSLRH--RVLPPQLLLKFPKEASFCLWLLHPEPSGRP---KMGELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~--~~~p~~~~~~~p~~~~li~~~L~~dP~~Rp---ta~eiL~hp~~~~~ 367 (720)
|++ ||............... ....+......+...+||.+|+ .+|.+|+ ++.++++||||...
T Consensus 237 ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h~~~~~~ 307 (376)
T cd05598 237 MLVGQPPFLADTPAETQLKVINWETTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKAHPFFKGI 307 (376)
T ss_pred hhhCCCCCCCCCHHHHHHHHhccCccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCCCCcCCC
Confidence 999 67655443222222211 1111112223445569999977 5999999 99999999999875
No 70
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=99.97 E-value=5.6e-32 Score=306.73 Aligned_cols=210 Identities=20% Similarity=0.253 Sum_probs=166.0
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC---CCCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~---~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
.+|..+|+.++|||||++++ .+..+. .+|+|||| .|++|.++|.. ...++++.++..++.||+.||.|||++
T Consensus 113 ~~E~~~l~~l~Hpniv~~~~-~~~~~~---~~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~ 188 (478)
T PTZ00267 113 RSELHCLAACDHFGIVKHFD-DFKSDD---KLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSR 188 (478)
T ss_pred HHHHHHHHhCCCCCEeEEEE-EEEECC---EEEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 36788999999999999999 555443 68999999 89999998843 234589999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004998 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+|||++.++.+||+|||++..+...... +
T Consensus 189 ~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~~-------------------------------~----------- 226 (478)
T PTZ00267 189 KMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSL-------------------------------D----------- 226 (478)
T ss_pred CEEECCcCHHhEEECCCCcEEEEeCcCceecCCcccc-------------------------------c-----------
Confidence 9999999999999999999999999987432110000 0
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhh
Q 004998 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
.....+||+.|+|||++.+..++.++|||||||+
T Consensus 227 ----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~ 260 (478)
T PTZ00267 227 ----------------------------------------------VASSFCGTPYYLAPELWERKRYSKKADMWSLGVI 260 (478)
T ss_pred ----------------------------------------------cccccCCCccccCHhHhCCCCCCcHHhHHHHHHH
Confidence 0011468999999999998889999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
+|||++ ||...... ..+..+..+..++......+...+||.+||+.||++||++.+++.|||+...
T Consensus 261 l~el~tg~~Pf~~~~~~-~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~~~~~~~ 329 (478)
T PTZ00267 261 LYELLTLHRPFKGPSQR-EIMQQVLYGKYDPFPCPVSSGMKALLDPLLSKNPALRPTTQQLLHTEFLKYV 329 (478)
T ss_pred HHHHHhCCCCCCCCCHH-HHHHHHHhCCCCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHhCHHHHHH
Confidence 999999 66654443 3344444343433322334556699999999999999999999999998654
No 71
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.97 E-value=6e-32 Score=295.95 Aligned_cols=212 Identities=20% Similarity=0.230 Sum_probs=159.6
Q ss_pred eeeehhhhcccCCCCCceecccceeecCC---CCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEA---AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~---~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
+..+|..++..++||||+++++ ++.... ....+|+||||.+++|.+++.. .+++..+..++.||+.||.|||+
T Consensus 69 ~~~~E~~~l~~l~h~~ii~~~~-~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~ 144 (364)
T cd07875 69 RAYRELVLMKCVNHKNIIGLLN-VFTPQKSLEEFQDVYIVMELMDANLCQVIQM---ELDHERMSYLLYQMLCGIKHLHS 144 (364)
T ss_pred HHHHHHHHHHhcCCCCccccce-eecccccccccCeEEEEEeCCCCCHHHHHHh---cCCHHHHHHHHHHHHHHHHHHhh
Confidence 3346788999999999999999 443322 2235799999977789998843 38899999999999999999999
Q ss_pred cCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004998 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||+||||||+|||++.++.+||+|||++...+...
T Consensus 145 ~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~-------------------------------------------- 180 (364)
T cd07875 145 AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF-------------------------------------------- 180 (364)
T ss_pred CCeecCCCCHHHEEECCCCcEEEEeCCCccccCCCC--------------------------------------------
Confidence 999999999999999999999999998874321110
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhh
Q 004998 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
......||+.|+|||++.+..++.++|||||||
T Consensus 181 -----------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~ 213 (364)
T cd07875 181 -----------------------------------------------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 213 (364)
T ss_pred -----------------------------------------------cccCCcccCCcCCHHHHhCCCCCchhhHHhHHH
Confidence 001136799999999999988999999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhcCCC-Ccc-------------------------------c--------cccCch
Q 004998 300 LLFELFC---PFSTGEEKTRTMSSLRHRVL-PPQ-------------------------------L--------LLKFPK 336 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~~~~-p~~-------------------------------~--------~~~~p~ 336 (720)
++|||++ ||............+..... ++. . ....+.
T Consensus 214 il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (364)
T cd07875 214 IMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQ 293 (364)
T ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHH
Confidence 9999999 67654433222111110000 000 0 001123
Q ss_pred HHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004998 337 EASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 337 ~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
..+||.+||+.||.+|||+.|+|+||||....+
T Consensus 294 ~~dll~~mL~~dP~~R~t~~e~L~hp~~~~~~~ 326 (364)
T cd07875 294 ARDLLSKMLVIDASKRISVDEALQHPYINVWYD 326 (364)
T ss_pred HHHHHHHhcCcCcccCCCHHHHhcCcccccccC
Confidence 459999999999999999999999999986433
No 72
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=99.97 E-value=7.6e-32 Score=284.41 Aligned_cols=203 Identities=20% Similarity=0.259 Sum_probs=150.0
Q ss_pred cccCCCCCceecccceeec-CCCCCcEEEEEecCCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCC
Q 004998 71 LTHGDHLRNQGGLSGVCEN-EAAIDPFVHAIEWGDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 148 (720)
Q Consensus 71 Ls~l~HpnIV~l~~~~~~~-~~~~~~~~lv~E~~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLK 148 (720)
|.+++||||+++++.+... ......++++|||..++|.+++.. ....+++.+++.++.||+.||.|||++||+|||||
T Consensus 56 l~~~~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dik 135 (288)
T cd07863 56 LEAFDHPNIVRLMDVCATSRTDRETKVTLVFEHVDQDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLK 135 (288)
T ss_pred hhhcCCCCeeeeeeeeccccCCCCceEEEEEcccccCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCC
Confidence 4456899999999943322 223446899999966799999954 33458999999999999999999999999999999
Q ss_pred CCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccC
Q 004998 149 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 228 (720)
Q Consensus 149 P~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~ 228 (720)
|+|||++.++.+||+|||++.......
T Consensus 136 p~Nili~~~~~~kl~dfg~~~~~~~~~----------------------------------------------------- 162 (288)
T cd07863 136 PENILVTSGGQVKLADFGLARIYSCQM----------------------------------------------------- 162 (288)
T ss_pred HHHEEECCCCCEEECccCccccccCcc-----------------------------------------------------
Confidence 999999999999999988773321100
Q ss_pred CCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhccc--
Q 004998 229 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 306 (720)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt-- 306 (720)
......||+.|+|||++.+..++.++|||||||++|||++
T Consensus 163 --------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~ 204 (288)
T cd07863 163 --------------------------------------ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 204 (288)
T ss_pred --------------------------------------cCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCC
Confidence 0011357899999999998889999999999999999998
Q ss_pred -cCCCCchHHHHHHHhhc-----------------CCCCc-------cccccCch-HHHHHHHcCCCCCCCCCChHHHHc
Q 004998 307 -PFSTGEEKTRTMSSLRH-----------------RVLPP-------QLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 307 -pf~~~~~~~~~~~~l~~-----------------~~~p~-------~~~~~~p~-~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
||............+.. ..+.+ ......+. ..+|+.+||++||.+|||+.|++.
T Consensus 205 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~ 284 (288)
T cd07863 205 PLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ 284 (288)
T ss_pred cCcCCCCHHHHHHHHHHHhCCCChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 44433322111111110 00000 01112233 359999999999999999999999
Q ss_pred Cccc
Q 004998 361 SEFL 364 (720)
Q Consensus 361 hp~~ 364 (720)
||||
T Consensus 285 hp~f 288 (288)
T cd07863 285 HPFF 288 (288)
T ss_pred CCCC
Confidence 9998
No 73
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=99.97 E-value=2.7e-32 Score=300.22 Aligned_cols=254 Identities=13% Similarity=0.140 Sum_probs=164.5
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..++.+++|||||++++ ++.+.. .+|+|||| .|++|.+++... ..+++..++.++.||+.||.|||++||
T Consensus 48 ~~~E~~il~~l~hp~iv~~~~-~~~~~~---~~~lv~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~ql~~aL~~LH~~gi 122 (377)
T cd05629 48 VKAERDVLAESDSPWVVSLYY-SFQDAQ---YLYLIMEFLPGGDLMTMLIKY-DTFSEDVTRFYMAECVLAIEAVHKLGF 122 (377)
T ss_pred HHHHHHHHHhCCCCCcceEEE-EEEcCC---eeEEEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 346777899999999999999 555543 68999999 899999999554 458999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.++|+|||++..+............ .......+. .+ ...+... .
T Consensus 123 vHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~-~~~~~~~~~--~~----------~~~~~~~-------~ 182 (377)
T cd05629 123 IHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAYYQKL-LQGKSNKNR--ID----------NRNSVAV-------D 182 (377)
T ss_pred eccCCCHHHEEECCCCCEEEeeccccccccccccccccccc-ccccccccc--cc----------ccccccc-------c
Confidence 99999999999999999999999998643221100000000 000000000 00 0000000 0
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
..+ .... ......+.+ ..........+||+.|+|||++.+..++.++|||||||++|
T Consensus 183 ~~~----~~~~---------~~~~~~~~~----------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ 239 (377)
T cd05629 183 SIN----LTMS---------SKDQIATWK----------KNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIMF 239 (377)
T ss_pred ccc----cccc---------chhhhhhhh----------hcccccccccCCCccccCHHHHccCCCCCceeeEecchhhh
Confidence 000 0000 000000000 00000111257999999999999888999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCC---CCccccccCchHHHHHHHcCCCCCCCC---CChHHHHcCcccCCC
Q 004998 303 ELFC---PFSTGEEKTRTMSSLRHRV---LPPQLLLKFPKEASFCLWLLHPEPSGR---PKMGELLQSEFLNEP 367 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~~---~p~~~~~~~p~~~~li~~~L~~dP~~R---pta~eiL~hp~~~~~ 367 (720)
||++ ||...... ..+..+.... ..|......+...+||.+||. +|.+| +++.|+++||||...
T Consensus 240 elltG~~Pf~~~~~~-~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~hp~~~~~ 311 (377)
T cd05629 240 ECLIGWPPFCSENSH-ETYRKIINWRETLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSHPFFRGV 311 (377)
T ss_pred hhhcCCCCCCCCCHH-HHHHHHHccCCccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcCCCcCCC
Confidence 9999 66554433 2233332211 111111233455699999997 77765 599999999999875
No 74
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.97 E-value=4.6e-32 Score=293.00 Aligned_cols=207 Identities=18% Similarity=0.181 Sum_probs=159.8
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHc-
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ- 140 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~- 140 (720)
+..+|..+|.+++||||+++++ ++..+. .+++|||| .|++|.+++.... .+++..+..++.||+.||.|||+.
T Consensus 49 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~ 123 (331)
T cd06649 49 QIIRELQVLHECNSPYIVGFYG-AFYSDG---EISICMEHMDGGSLDQVLKEAK-RIPEEILGKVSIAVLRGLAYLREKH 123 (331)
T ss_pred HHHHHHHHHHHCCCCCCCeEEE-EEEECC---EEEEEeecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHhhcC
Confidence 3447888999999999999999 444443 57999999 8999999995543 489999999999999999999986
Q ss_pred CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004998 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
+|+||||||+|||++.++.++|+|||++......
T Consensus 124 ~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~---------------------------------------------- 157 (331)
T cd06649 124 QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---------------------------------------------- 157 (331)
T ss_pred CEEcCCCChhhEEEcCCCcEEEccCccccccccc----------------------------------------------
Confidence 6999999999999999999999998877322100
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhh
Q 004998 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
......||+.|+|||++.+..++.++|||||||+
T Consensus 158 ----------------------------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~i 191 (331)
T cd06649 158 ----------------------------------------------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLS 191 (331)
T ss_pred ----------------------------------------------ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHH
Confidence 0001367999999999998889999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhh----------------------------------------------cCCCCcccc
Q 004998 301 LFELFC---PFSTGEEKTRTMSSLR----------------------------------------------HRVLPPQLL 331 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~----------------------------------------------~~~~p~~~~ 331 (720)
+|||++ ||...... .....+. ....+....
T Consensus 192 l~el~tg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (331)
T cd06649 192 LVELAIGRYPIPPPDAK-ELEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPN 270 (331)
T ss_pred HHHHHhCCCCCCCCCHH-HHHHHhcccccccccCCccccCcccccccccccccccccccchhHHHHHHHHHhCCCcCCCC
Confidence 999999 66543221 1111111 111111111
Q ss_pred c-cCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 332 L-KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 332 ~-~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
. ..++..+||.+||.+||++|||+.+||+||||+..
T Consensus 271 ~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~~~~ 307 (331)
T cd06649 271 GVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFIKRS 307 (331)
T ss_pred ccccHHHHHHHHHHccCCcccCCCHHHHhcChHHhhc
Confidence 1 22445699999999999999999999999999865
No 75
>PHA03209 serine/threonine kinase US3; Provisional
Probab=99.97 E-value=5.6e-32 Score=295.57 Aligned_cols=206 Identities=18% Similarity=0.201 Sum_probs=156.0
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCceec
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 145 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHr 145 (720)
.|..+|.+++||||+++++ ++.... ..++|||+..++|.+++......+++..++.|+.||+.||.|||++|||||
T Consensus 106 ~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHr 181 (357)
T PHA03209 106 IEAMLLQNVNHPSVIRMKD-TLVSGA---ITCMVLPHYSSDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIHR 181 (357)
T ss_pred HHHHHHHhCCCCCCcChhh-eEEeCC---eeEEEEEccCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecC
Confidence 5788999999999999999 444443 578999997789999996666679999999999999999999999999999
Q ss_pred cCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccccc
Q 004998 146 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 225 (720)
Q Consensus 146 DLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~ 225 (720)
||||+|||++.++.++|+|||.+.......
T Consensus 182 Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~-------------------------------------------------- 211 (357)
T PHA03209 182 DVKTENIFINDVDQVCIGDLGAAQFPVVAP-------------------------------------------------- 211 (357)
T ss_pred CCCHHHEEECCCCCEEEecCccccccccCc--------------------------------------------------
Confidence 999999999999999999998873210000
Q ss_pred ccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhcc
Q 004998 226 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 305 (720)
Q Consensus 226 ~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLl 305 (720)
......||+.|+|||++.+..++.++|||||||++|||+
T Consensus 212 -----------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell 250 (357)
T PHA03209 212 -----------------------------------------AFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEML 250 (357)
T ss_pred -----------------------------------------ccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHH
Confidence 000135899999999999988999999999999999999
Q ss_pred c----cCCCCch---------HHHHHHHhhc-CCCCcccc-------------------------------ccCchHHHH
Q 004998 306 C----PFSTGEE---------KTRTMSSLRH-RVLPPQLL-------------------------------LKFPKEASF 340 (720)
Q Consensus 306 t----pf~~~~~---------~~~~~~~l~~-~~~p~~~~-------------------------------~~~p~~~~l 340 (720)
+ +|..... .......+.. +..|..+. .......+|
T Consensus 251 ~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 330 (357)
T PHA03209 251 AYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFL 330 (357)
T ss_pred HcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHH
Confidence 7 2222110 0011111111 11111111 011223479
Q ss_pred HHHcCCCCCCCCCChHHHHcCcccCC
Q 004998 341 CLWLLHPEPSGRPKMGELLQSEFLNE 366 (720)
Q Consensus 341 i~~~L~~dP~~Rpta~eiL~hp~~~~ 366 (720)
|.+||++||.+|||+.|+|+||||+.
T Consensus 331 i~~mL~~dP~~Rpta~e~l~hp~f~~ 356 (357)
T PHA03209 331 VHKMLTFDAAMRPSAEEILNYPMFAQ 356 (357)
T ss_pred HHHHHcCCcccCcCHHHHhcCchhcc
Confidence 99999999999999999999999985
No 76
>PTZ00036 glycogen synthase kinase; Provisional
Probab=99.97 E-value=4.5e-32 Score=304.28 Aligned_cols=213 Identities=14% Similarity=0.198 Sum_probs=157.3
Q ss_pred ehhhhcccCCCCCceecccceeec----CCCCCcEEEEEecCCCCHHHHHh---CCCCCCCHHHHHHHHHHHHHHHHHHH
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCEN----EAAIDPFVHAIEWGDVSLRQWLD---KPKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~----~~~~~~~~lv~E~~ggsL~~~L~---~~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
+|..+|..++|||||++++.++.. ......+++||||.+++|.+++. .....+++..++.++.||+.||.|||
T Consensus 108 ~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l~lvmE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH 187 (440)
T PTZ00036 108 RELLIMKNLNHINIIFLKDYYYTECFKKNEKNIFLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIH 187 (440)
T ss_pred HHHHHHHhcCCCCCcceeeeEeecccccCCCceEEEEEEecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 688899999999999998844322 12223577999997778988873 24456999999999999999999999
Q ss_pred HcCceeccCCCCcEEEccCC-ceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCC
Q 004998 139 SQGIVVHNVRPSCFVMSSFN-HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~~~~-~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~ 217 (720)
++||+||||||+|||++.++ .+||+|||+++......
T Consensus 188 ~~~IiHrDLKp~NILl~~~~~~vkL~DFGla~~~~~~~------------------------------------------ 225 (440)
T PTZ00036 188 SKFICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLLAGQ------------------------------------------ 225 (440)
T ss_pred HCCEecCCcCHHHEEEcCCCCceeeeccccchhccCCC------------------------------------------
Confidence 99999999999999998665 69999888874321000
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-CCCccccchh
Q 004998 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYR 296 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwS 296 (720)
......||+.|+|||++.+. .|+.++||||
T Consensus 226 -------------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwS 256 (440)
T PTZ00036 226 -------------------------------------------------RSVSYICSRFYRAPELMLGATNYTTHIDLWS 256 (440)
T ss_pred -------------------------------------------------CcccCCCCcCccCHHHhcCCCCCCcHHHHHH
Confidence 00114679999999998765 4899999999
Q ss_pred hhhhhhhccc---cCCCCchHHHHHHHhhcC------------------CCCc----c----ccccC-chHHHHHHHcCC
Q 004998 297 LGVLLFELFC---PFSTGEEKTRTMSSLRHR------------------VLPP----Q----LLLKF-PKEASFCLWLLH 346 (720)
Q Consensus 297 LGvll~eLlt---pf~~~~~~~~~~~~l~~~------------------~~p~----~----~~~~~-p~~~~li~~~L~ 346 (720)
|||++|||++ ||.+..........+... .+|. . ++... ++..+||.+||.
T Consensus 257 lGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~ 336 (440)
T PTZ00036 257 LGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLK 336 (440)
T ss_pred HHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCC
Confidence 9999999999 555443322222211100 0111 0 11122 344599999999
Q ss_pred CCCCCCCChHHHHcCcccCCCcc
Q 004998 347 PEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 347 ~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
+||.+|||+.|+|+||||....+
T Consensus 337 ~dP~~R~ta~e~l~hp~f~~~~~ 359 (440)
T PTZ00036 337 YEPLKRLNPIEALADPFFDDLRD 359 (440)
T ss_pred CChhHCcCHHHHhCChhHHhhhc
Confidence 99999999999999999987643
No 77
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=99.97 E-value=3.4e-32 Score=296.77 Aligned_cols=213 Identities=19% Similarity=0.222 Sum_probs=158.9
Q ss_pred eeeehhhhcccCCCCCceecccceeecC--CCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENE--AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~--~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+..+|..++..++||||+++++.+.... .....+|++|||.+++|.+++.. .+++..++.++.||+.||.|||++
T Consensus 62 ~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~---~l~~~~~~~~~~qi~~aL~~LH~~ 138 (355)
T cd07874 62 RAYRELVLMKCVNHKNIISLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSA 138 (355)
T ss_pred HHHHHHHHHHHhCCCchhceeeeeeccccccccceeEEEhhhhcccHHHHHhh---cCCHHHHHHHHHHHHHHHHHHHhC
Confidence 4447888999999999999999433222 12235799999977788888843 388999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004998 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+|||++.++.+||+|||+++..+...
T Consensus 139 givHrDikp~Nill~~~~~~kl~Dfg~~~~~~~~~--------------------------------------------- 173 (355)
T cd07874 139 GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF--------------------------------------------- 173 (355)
T ss_pred CcccCCCChHHEEECCCCCEEEeeCcccccCCCcc---------------------------------------------
Confidence 99999999999999999999999998874321110
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhh
Q 004998 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
......||+.|+|||++.+..++.++|||||||+
T Consensus 174 ----------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~i 207 (355)
T cd07874 174 ----------------------------------------------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCI 207 (355)
T ss_pred ----------------------------------------------ccCCccccCCccCHHHHcCCCCCchhhHHHHHHH
Confidence 0011367999999999998889999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhc----------------------C------CCCccc-----------cc-cCchH
Q 004998 301 LFELFC---PFSTGEEKTRTMSSLRH----------------------R------VLPPQL-----------LL-KFPKE 337 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~----------------------~------~~p~~~-----------~~-~~p~~ 337 (720)
+|+|++ ||............+.. . .++..+ .. .....
T Consensus 208 l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (355)
T cd07874 208 MGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQA 287 (355)
T ss_pred HHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHH
Confidence 999999 66554322111111100 0 000000 00 11234
Q ss_pred HHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004998 338 ASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 338 ~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
.+|+.+||.+||++|||+.|+|+||||....+
T Consensus 288 ~~li~~mL~~dP~~Rps~~ell~hp~~~~~~~ 319 (355)
T cd07874 288 RDLLSKMLVIDPAKRISVDEALQHPYINVWYD 319 (355)
T ss_pred HHHHHHHhcCCchhcCCHHHHhcCcchhcccC
Confidence 59999999999999999999999999986544
No 78
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=99.97 E-value=4.7e-32 Score=297.58 Aligned_cols=206 Identities=16% Similarity=0.211 Sum_probs=160.1
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|..++++++||||+++++ ++.++. .+|+|||| .|++|.+++... .+++..+..++.||+.||.|||++||+|
T Consensus 92 ~e~~il~~~~h~~iv~~~~-~~~~~~---~~~lv~Ey~~gg~L~~~l~~~--~l~~~~~~~~~~qi~~aL~~LH~~~ivH 165 (370)
T cd05596 92 EERDIMAHANSEWIVQLHY-AFQDDK---YLYMVMEYMPGGDLVNLMSNY--DIPEKWARFYTAEVVLALDAIHSMGFIH 165 (370)
T ss_pred HHHHHHHhCCCCCcceEEE-EEecCC---EEEEEEcCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 5677899999999999998 555543 68999999 899999998543 3899999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+|||++.++.+||+|||.+........
T Consensus 166 rDLkp~NILl~~~~~~kL~DfG~~~~~~~~~~------------------------------------------------ 197 (370)
T cd05596 166 RDVKPDNMLLDKSGHLKLADFGTCMKMDANGM------------------------------------------------ 197 (370)
T ss_pred cCCCHHHEEEcCCCCEEEEeccceeeccCCCc------------------------------------------------
Confidence 99999999999999999999998743211100
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC----CCCccccchhhhhh
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA----PVSCASDIYRLGVL 300 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~----~~s~~sDIwSLGvl 300 (720)
......+||+.|+|||++.+. .++.++|||||||+
T Consensus 198 -----------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvi 236 (370)
T cd05596 198 -----------------------------------------VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVF 236 (370)
T ss_pred -----------------------------------------ccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHH
Confidence 000114689999999998654 37899999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCC---ccccccCchHHHHHHHcCCCCCCC--CCChHHHHcCcccCCC
Q 004998 301 LFELFC---PFSTGEEKTRTMSSLRHRVLP---PQLLLKFPKEASFCLWLLHPEPSG--RPKMGELLQSEFLNEP 367 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p---~~~~~~~p~~~~li~~~L~~dP~~--Rpta~eiL~hp~~~~~ 367 (720)
+|||++ ||...... ..+..+...... |......+...+||.+||..+|.+ |+++.++++||||+..
T Consensus 237 lyelltG~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~~~~~~ 310 (370)
T cd05596 237 LYEMLVGDTPFYADSLV-GTYSKIMDHKNSLTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSHPFFKND 310 (370)
T ss_pred HHHHHhCCCCcCCCCHH-HHHHHHHcCCCcCCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcCcccCCC
Confidence 999999 66654443 333444332211 111122344459999999999987 9999999999999874
No 79
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=99.97 E-value=1.3e-31 Score=288.60 Aligned_cols=206 Identities=18% Similarity=0.254 Sum_probs=162.7
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..|..+|..++||||+++++ ++..+. .+|++||| .|++|.+++.+.+ .+++..+..++.||+.||.|||++||+
T Consensus 48 ~~E~~il~~l~hp~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~iv 122 (323)
T cd05584 48 KAERNILEAVKHPFIVDLIY-AFQTGG---KLYLILEYLSGGELFMHLEREG-IFMEDTACFYLSEISLALEHLHQQGII 122 (323)
T ss_pred HHHHHHHHhCCCCchhceee-EEecCC---eEEEEEeCCCCchHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 46777999999999999999 554443 57999999 8999999995544 489999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.+||+|||++....... .
T Consensus 123 H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~---------------------------------~-------------- 155 (323)
T cd05584 123 YRDLKPENILLDAQGHVKLTDFGLCKESIHEG---------------------------------T-------------- 155 (323)
T ss_pred cCCCCHHHeEECCCCCEEEeeCcCCeecccCC---------------------------------C--------------
Confidence 99999999999999999999998873210000 0
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......||+.|+|||++.+..++.++|||||||++||
T Consensus 156 -------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e 192 (323)
T cd05584 156 -------------------------------------------VTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYD 192 (323)
T ss_pred -------------------------------------------cccccCCCccccChhhccCCCCCCcceecccHHHHHH
Confidence 0011468999999999998889999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCC
Q 004998 304 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~ 367 (720)
|++ ||...... ..+..+.....+ ......+...+||.+||+++|++|| ++.++++||||...
T Consensus 193 ll~G~~pf~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~~~~~~ 262 (323)
T cd05584 193 MLTGAPPFTAENRK-KTIDKILKGKLN-LPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPFFRHV 262 (323)
T ss_pred HhcCCCCCCCCCHH-HHHHHHHcCCCC-CCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCCCcCCC
Confidence 999 66654443 333333332221 1112234556999999999999999 89999999999875
No 80
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=99.97 E-value=6.5e-32 Score=291.66 Aligned_cols=205 Identities=18% Similarity=0.273 Sum_probs=158.0
Q ss_pred ehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 66 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
+|..++..+ +||||+++++ ++.+.. .+|+|||| .|++|.+++.+. ..+++..++.++.||+.||.|||++||+
T Consensus 44 ~e~~il~~~~~hp~Iv~~~~-~~~~~~---~~~lv~e~~~~g~L~~~~~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~iv 118 (329)
T cd05588 44 TEKHVFETASNHPFLVGLHS-CFQTES---RLFFVIEFVSGGDLMFHMQRQ-RKLPEEHARFYSAEISLALNFLHERGII 118 (329)
T ss_pred HHHHHHHhccCCCCCCceEE-EEEcCC---EEEEEEeCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeE
Confidence 566677776 7999999999 555543 67999999 899999998544 3599999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.+||+|||++...-.. .+
T Consensus 119 H~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~---------------------------------~~-------------- 151 (329)
T cd05588 119 YRDLKLDNVLLDAEGHIKLTDYGMCKEGIRP---------------------------------GD-------------- 151 (329)
T ss_pred ecCCCHHHeEECCCCCEEECcCccccccccC---------------------------------CC--------------
Confidence 9999999999999999999999887321000 00
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
.....+||+.|+|||++.+..++.++|||||||++||
T Consensus 152 -------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~e 188 (329)
T cd05588 152 -------------------------------------------TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFE 188 (329)
T ss_pred -------------------------------------------ccccccCCccccCHHHHcCCCCCCccceechHHHHHH
Confidence 0011468999999999999889999999999999999
Q ss_pred ccc---cCCCC--------chHHHHHHHhhcCCCCccccc-cCchHHHHHHHcCCCCCCCCCC------hHHHHcCcccC
Q 004998 304 LFC---PFSTG--------EEKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPK------MGELLQSEFLN 365 (720)
Q Consensus 304 Llt---pf~~~--------~~~~~~~~~l~~~~~p~~~~~-~~p~~~~li~~~L~~dP~~Rpt------a~eiL~hp~~~ 365 (720)
|++ ||... .........+..... .++. ..+...+|+.+||++||.+||+ +.++++||||.
T Consensus 189 l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~--~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~~~ 266 (329)
T cd05588 189 MMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQI--RIPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFR 266 (329)
T ss_pred HHHCCCCcccccccccccccchHHHHHHHHcCCC--CCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcCCCCC
Confidence 999 66421 111122222332221 1122 2345569999999999999987 78999999997
Q ss_pred CC
Q 004998 366 EP 367 (720)
Q Consensus 366 ~~ 367 (720)
..
T Consensus 267 ~~ 268 (329)
T cd05588 267 NI 268 (329)
T ss_pred CC
Confidence 64
No 81
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=99.97 E-value=7.3e-32 Score=290.13 Aligned_cols=204 Identities=16% Similarity=0.246 Sum_probs=159.3
Q ss_pred ehhhhccc-CCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 66 SDGVELTH-GDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~Ls~-l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.|..++.. .+||||+++++ ++.... .+|+|||| .+++|..++.+.. .+++..++.++.||+.||.|||++||+
T Consensus 44 ~e~~il~~~~~hp~i~~~~~-~~~~~~---~~~lv~E~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~iv 118 (321)
T cd05591 44 TEKRILALAAKHPFLTALHC-CFQTKD---RLFFVMEYVNGGDLMFQIQRSR-KFDEPRSRFYAAEVTLALMFLHRHGVI 118 (321)
T ss_pred HHHHHHHhccCCCCccceee-EEEcCC---eEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 45556654 48999999999 555543 57999999 8999999995543 489999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.++|+|||++.......
T Consensus 119 HrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~------------------------------------------------ 150 (321)
T cd05591 119 YRDLKLDNILLDAEGHCKLADFGMCKEGILNG------------------------------------------------ 150 (321)
T ss_pred ccCCCHHHeEECCCCCEEEeecccceecccCC------------------------------------------------
Confidence 99999999999999999999999873210000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
.......||+.|+|||++.+..++.++|||||||++||
T Consensus 151 ------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~e 188 (321)
T cd05591 151 ------------------------------------------VTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYE 188 (321)
T ss_pred ------------------------------------------ccccccccCccccCHHHHcCCCCCCccceechhHHHHH
Confidence 00011468999999999998889999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCC-CCccccccCchHHHHHHHcCCCCCCCCC-------ChHHHHcCcccCCC
Q 004998 304 LFC---PFSTGEEKTRTMSSLRHRV-LPPQLLLKFPKEASFCLWLLHPEPSGRP-------KMGELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~~-~p~~~~~~~p~~~~li~~~L~~dP~~Rp-------ta~eiL~hp~~~~~ 367 (720)
|++ ||...... .....+.... ..|. ...+...+|+.+||++||++|| ++.++++||||...
T Consensus 189 l~tg~~Pf~~~~~~-~~~~~i~~~~~~~p~--~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp~~~~~ 260 (321)
T cd05591 189 MMAGQPPFEADNED-DLFESILHDDVLYPV--WLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHPFFKEI 260 (321)
T ss_pred HhcCCCCCCCCCHH-HHHHHHHcCCCCCCC--CCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCCccCCC
Confidence 999 67665544 3333333322 1121 1224455999999999999999 89999999999764
No 82
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=99.97 E-value=6.9e-32 Score=295.08 Aligned_cols=240 Identities=16% Similarity=0.236 Sum_probs=164.5
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..|..++.+++||||+++++ .+.+.. .+|+|||| .|++|.+++.+.. .+++..++.++.||+.||.|||++||+
T Consensus 49 ~~e~~~l~~l~~~~iv~~~~-~~~~~~---~~~lv~E~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~~L~~lH~~giv 123 (360)
T cd05627 49 RAERDILVEADGAWVVKMFY-SFQDKR---NLYLIMEFLPGGDMMTLLMKKD-TLSEEATQFYIAETVLAIDAIHQLGFI 123 (360)
T ss_pred HHHHHHHHhCCCCCEeeEEE-EEEcCC---EEEEEEeCCCCccHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeE
Confidence 35667889999999999999 555543 68999999 8999999995543 499999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.++|+|||++............... ....+ .++.+.......
T Consensus 124 HrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~~~~~~-------~~~~~------------~~~~~~~~~~~~---- 180 (360)
T cd05627 124 HRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFYRNL-------THNPP------------SDFSFQNMNSKR---- 180 (360)
T ss_pred ccCCCHHHEEECCCCCEEEeeccCCccccccccccccccc-------ccCCc------------cccccccccccc----
Confidence 9999999999999999999999998654221100000000 00000 011000000000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
..+.............+||+.|+|||++.+..++.++|||||||++||
T Consensus 181 --------------------------------~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilye 228 (360)
T cd05627 181 --------------------------------KAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYE 228 (360)
T ss_pred --------------------------------ccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeee
Confidence 000000000000112579999999999999999999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcC----CCCccccccCchHHHHHHHcCCCCCCCCC---ChHHHHcCcccCCC
Q 004998 304 LFC---PFSTGEEKTRTMSSLRHR----VLPPQLLLKFPKEASFCLWLLHPEPSGRP---KMGELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~----~~p~~~~~~~p~~~~li~~~L~~dP~~Rp---ta~eiL~hp~~~~~ 367 (720)
|++ ||...... ..+..+... .+|+. ....+...+||.+|+. ||.+|+ ++.++++||||...
T Consensus 229 l~tG~~Pf~~~~~~-~~~~~i~~~~~~~~~p~~-~~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~hp~f~~~ 299 (360)
T cd05627 229 MLIGYPPFCSETPQ-ETYRKVMNWKETLVFPPE-VPISEKAKDLILRFCT-DSENRIGSNGVEEIKSHPFFEGV 299 (360)
T ss_pred cccCCCCCCCCCHH-HHHHHHHcCCCceecCCC-CCCCHHHHHHHHHhcc-ChhhcCCCCCHHHHhcCCCCCCC
Confidence 999 66554443 233333321 12221 1233455699999874 999998 58999999999986
No 83
>PHA02988 hypothetical protein; Provisional
Probab=99.97 E-value=1.2e-31 Score=283.53 Aligned_cols=203 Identities=17% Similarity=0.129 Sum_probs=157.7
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH-c
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-Q 140 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs-~ 140 (720)
+..+|..+|.+++|||||++++.+.........++++||| .||+|.+++.+. ..+++.....++.|++.||.|||+ .
T Consensus 64 ~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~ 142 (283)
T PHA02988 64 ITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYCTRGYLREVLDKE-KDLSFKTKLDMAIDCCKGLYNLYKYT 142 (283)
T ss_pred HHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEeCCCCcHHHHHhhC-CCCChhHHHHHHHHHHHHHHHHHhcC
Confidence 3347888999999999999999433322333468999999 999999999554 358999999999999999999998 5
Q ss_pred CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004998 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
+++||||||+|||++.++.+|++|||++...... .
T Consensus 143 ~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~----------------------------------~----------- 177 (283)
T PHA02988 143 NKPYKNLTSVSFLVTENYKLKIICHGLEKILSSP----------------------------------P----------- 177 (283)
T ss_pred CCCCCcCChhhEEECCCCcEEEcccchHhhhccc----------------------------------c-----------
Confidence 9999999999999999999999988877321100 0
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC--CCCCccccchhhh
Q 004998 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG--APVSCASDIYRLG 298 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~--~~~s~~sDIwSLG 298 (720)
...+||+.|+|||++.+ ..++.++||||||
T Consensus 178 ------------------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlG 209 (283)
T PHA02988 178 ------------------------------------------------FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLG 209 (283)
T ss_pred ------------------------------------------------ccccCcccccCHHHhhhccccccchhhhhHHH
Confidence 01357889999999976 5699999999999
Q ss_pred hhhhhccc---cCCCCchHHHHHHHhhcCCCCcccc-ccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 299 VLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLL-LKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~-~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|++|||++ ||...... .....+......+.++ ...+...+|+.+||+.||++|||+.|+++
T Consensus 210 vil~el~~g~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 274 (283)
T PHA02988 210 VVLWEIFTGKIPFENLTTK-EIYDLIINKNNSLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILY 274 (283)
T ss_pred HHHHHHHHCCCCCCCCCHH-HHHHHHHhcCCCCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHH
Confidence 99999999 77765443 3333333222223333 23344559999999999999999999985
No 84
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.97 E-value=1.2e-31 Score=289.68 Aligned_cols=208 Identities=19% Similarity=0.235 Sum_probs=158.9
Q ss_pred eeehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 64 KHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 64 ~~~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
...|..+|.++ +||||+++++ ++.... .+|++||| .|++|.+++.... .+++.+++.++.||+.||.|||++|
T Consensus 51 ~~~e~~~l~~l~~~~~i~~~~~-~~~~~~---~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~ 125 (332)
T cd05614 51 TRTERNVLEHVRQSPFLVTLHY-AFQTEA---KLHLILDYVSGGEMFTHLYQRD-NFSEDEVRFYSGEIILALEHLHKLG 125 (332)
T ss_pred HHHHHHHHHhccCCCCcccEEE-EEecCC---EEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 34677788888 5999999998 554443 57999999 8999999995543 4999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||++..+......
T Consensus 126 ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~~~~-------------------------------------------- 161 (332)
T cd05614 126 IVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEEKE-------------------------------------------- 161 (332)
T ss_pred cEecCCCHHHeEECCCCCEEEeeCcCCccccccCCC--------------------------------------------
Confidence 999999999999999999999999987432111000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC-CCccccchhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVL 300 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGvl 300 (720)
......||+.|+|||++.+.. ++.++|||||||+
T Consensus 162 ---------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~i 196 (332)
T cd05614 162 ---------------------------------------------RTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGIL 196 (332)
T ss_pred ---------------------------------------------ccccccCCccccCHHHhcCCCCCCCccccccchhh
Confidence 001146899999999998764 7899999999999
Q ss_pred hhhccc---cCCCCc---hHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCC
Q 004998 301 LFELFC---PFSTGE---EKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 367 (720)
Q Consensus 301 l~eLlt---pf~~~~---~~~~~~~~l~~~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~ 367 (720)
+|||++ ||.... ........+... .+.+.... +...+|+.+||+.||++|| ++.++++||||...
T Consensus 197 l~elltg~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~ 273 (332)
T cd05614 197 IFELLTGASPFTLEGERNTQSEVSRRILKC--DPPFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFKGL 273 (332)
T ss_pred hhhhhcCCCCCCCCCCCCCHHHHHHHHhcC--CCCCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCCcCCC
Confidence 999999 664321 112222222221 12222233 4455999999999999999 78899999999875
No 85
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=99.97 E-value=1e-31 Score=288.46 Aligned_cols=204 Identities=18% Similarity=0.275 Sum_probs=158.2
Q ss_pred ehhhhccc-CCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 66 SDGVELTH-GDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~Ls~-l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.|..++.. ++||||+++++ ++.+.. .+|+|||| .|++|.+++... ..+++..+..++.||+.||+|||++||+
T Consensus 44 ~e~~~l~~~~~~~~i~~~~~-~~~~~~---~~~lv~E~~~~g~L~~~i~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~iv 118 (316)
T cd05620 44 VEKRVLALAWENPFLTHLYC-TFQTKE---HLFFVMEFLNGGDLMFHIQDK-GRFDLYRATFYAAEIVCGLQFLHSKGII 118 (316)
T ss_pred HHHHHHHhccCCCCccCeeE-EEEeCC---EEEEEECCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeE
Confidence 34445543 58999999999 554443 68999999 899999999554 3489999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.++|+|||++...... +-
T Consensus 119 HrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~----------------------------------~~------------- 151 (316)
T cd05620 119 YRDLKLDNVMLDRDGHIKIADFGMCKENVFG----------------------------------DN------------- 151 (316)
T ss_pred ecCCCHHHeEECCCCCEEeCccCCCeecccC----------------------------------CC-------------
Confidence 9999999999999999999999877321000 00
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......||+.|+|||++.+..++.++|||||||++||
T Consensus 152 -------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~e 188 (316)
T cd05620 152 -------------------------------------------RASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYE 188 (316)
T ss_pred -------------------------------------------ceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHH
Confidence 0011468999999999999889999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCCCCccccc-cCchHHHHHHHcCCCCCCCCCCh-HHHHcCcccCCC
Q 004998 304 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPKM-GELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~~~p~~~~~-~~p~~~~li~~~L~~dP~~Rpta-~eiL~hp~~~~~ 367 (720)
|++ ||...... .....+.... +.++. ..++..+|+.+||+.||.+||++ +++++||||...
T Consensus 189 l~~g~~Pf~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~~h~~f~~~ 254 (316)
T cd05620 189 MLIGQSPFHGDDED-ELFESIRVDT--PHYPRWITKESKDILEKLFERDPTRRLGVVGNIRGHPFFKTI 254 (316)
T ss_pred HHhCCCCCCCCCHH-HHHHHHHhCC--CCCCCCCCHHHHHHHHHHccCCHHHcCCChHHHHcCCCcCCC
Confidence 999 66654432 3333333221 11122 23455699999999999999997 589999999875
No 86
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=4.3e-33 Score=292.04 Aligned_cols=207 Identities=19% Similarity=0.270 Sum_probs=167.4
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
...|+.+|+++++|||.++|+.++... .++++||| .||++.+.|+ .+..+.+.++..++++++.||.|||.++.
T Consensus 58 iqqei~~Ls~~~~~~it~yygsyl~g~----~LwiiMey~~gGsv~~lL~-~~~~~~E~~i~~ilre~l~~l~ylH~~~k 132 (467)
T KOG0201|consen 58 IQQEISVLSQCDSPNITEYYGSYLKGT----KLWIIMEYCGGGSVLDLLK-SGNILDEFEIAVILREVLKGLDYLHSEKK 132 (467)
T ss_pred HHHHHHHHHhcCcchHHhhhhheeecc----cHHHHHHHhcCcchhhhhc-cCCCCccceeeeehHHHHHHhhhhhhcce
Confidence 336888999999999999999444433 57999999 9999999984 44446999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+|||||+.|||+..+|.||++|||++......
T Consensus 133 iHrDIKaanil~s~~g~vkl~DfgVa~ql~~~------------------------------------------------ 164 (467)
T KOG0201|consen 133 IHRDIKAANILLSESGDVKLADFGVAGQLTNT------------------------------------------------ 164 (467)
T ss_pred ecccccccceeEeccCcEEEEecceeeeeech------------------------------------------------
Confidence 99999999999999999999999987322110
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
..+....+|||.|||||++.+..|+.++||||||++.+
T Consensus 165 ------------------------------------------~~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITai 202 (467)
T KOG0201|consen 165 ------------------------------------------VKRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAI 202 (467)
T ss_pred ------------------------------------------hhccccccccccccchhhhccccccchhhhhhhhHHHH
Confidence 00012268999999999999888999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCCCCccccccCch-HHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 303 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~-~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
||++ |+....+ ...+..| ....||.+...+++ ..+|+..||.+||+.||+|.++|+|+|++..
T Consensus 203 Ela~GePP~s~~hP-mrvlflI-pk~~PP~L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh~FIk~a 269 (467)
T KOG0201|consen 203 ELAKGEPPHSKLHP-MRVLFLI-PKSAPPRLDGDFSPPFKEFVEACLDKNPEFRPSAKELLKHKFIKRA 269 (467)
T ss_pred HHhcCCCCCcccCc-ceEEEec-cCCCCCccccccCHHHHHHHHHHhhcCcccCcCHHHHhhhHHHHhc
Confidence 9999 4433333 1222222 33456666666666 6699999999999999999999999999984
No 87
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=99.97 E-value=1.2e-31 Score=289.77 Aligned_cols=206 Identities=18% Similarity=0.270 Sum_probs=156.3
Q ss_pred ehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 66 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
+|..++.++ +||||+++++ ++.... .+|+|||| .+++|..++... ..+++..++.++.||+.||.|||++||+
T Consensus 44 ~E~~~l~~~~~hp~iv~~~~-~~~~~~---~~~lv~E~~~~~~L~~~~~~~-~~l~~~~~~~i~~qi~~~l~~lH~~~iv 118 (329)
T cd05618 44 TEKHVFEQASNHPFLVGLHS-CFQTES---RLFFVIEYVNGGDLMFHMQRQ-RKLPEEHARFYSAEISLALNYLHERGII 118 (329)
T ss_pred HHHHHHHhcCCCCcCCceee-EEEeCC---EEEEEEeCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 455566554 8999999999 555543 67999999 899999988544 3499999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.+||+|||++...-... +
T Consensus 119 H~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~---------------------------------~-------------- 151 (329)
T cd05618 119 YRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG---------------------------------D-------------- 151 (329)
T ss_pred eCCCCHHHEEECCCCCEEEeeCCccccccCCC---------------------------------C--------------
Confidence 99999999999999999999998873210000 0
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......||+.|+|||++.+..++.++|||||||++||
T Consensus 152 -------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e 188 (329)
T cd05618 152 -------------------------------------------TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFE 188 (329)
T ss_pred -------------------------------------------ccccccCCccccCHHHHcCCCCCCccceecccHHHHH
Confidence 0011468999999999999889999999999999999
Q ss_pred ccc---cCCCC--------chHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCC------hHHHHcCcccCC
Q 004998 304 LFC---PFSTG--------EEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK------MGELLQSEFLNE 366 (720)
Q Consensus 304 Llt---pf~~~--------~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpt------a~eiL~hp~~~~ 366 (720)
|++ ||... .........+..... .......+...+|+.+||+.||.+||+ +.++++||||..
T Consensus 189 l~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~-~~p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp~f~~ 267 (329)
T cd05618 189 MMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI-RIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRN 267 (329)
T ss_pred HhhCCCCCccCCCcCCcccccHHHHHHHHhcCCC-CCCCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcCCCCCC
Confidence 999 66311 111112222222211 111122345569999999999999998 479999999987
Q ss_pred C
Q 004998 367 P 367 (720)
Q Consensus 367 ~ 367 (720)
.
T Consensus 268 ~ 268 (329)
T cd05618 268 V 268 (329)
T ss_pred C
Confidence 5
No 88
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=99.97 E-value=1.3e-31 Score=287.70 Aligned_cols=203 Identities=17% Similarity=0.263 Sum_probs=157.2
Q ss_pred hhhhcc-cCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 67 DGVELT-HGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 67 e~~~Ls-~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
|..++. ..+||||+++++ ++..+. .+|+|||| .|++|.+++.... .+++..++.++.||+.||.|||++||+|
T Consensus 45 e~~~l~~~~~hp~i~~~~~-~~~~~~---~~~lv~e~~~gg~L~~~~~~~~-~~~~~~~~~~~~qi~~al~~LH~~~ivH 119 (316)
T cd05592 45 ERRVLALAWEHPFLTHLFC-TFQTKE---HLFFVMEYLNGGDLMFHIQSSG-RFDEARARFYAAEIICGLQFLHKKGIIY 119 (316)
T ss_pred HHHHHHhccCCCCccceee-EEEcCC---EEEEEEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCEEe
Confidence 333444 458999999999 554443 68999999 8999999995544 4999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+|||++.++.+||+|||++.......
T Consensus 120 ~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~------------------------------------------------- 150 (316)
T cd05592 120 RDLKLDNVLLDKDGHIKIADFGMCKENMNGE------------------------------------------------- 150 (316)
T ss_pred CCCCHHHeEECCCCCEEEccCcCCeECCCCC-------------------------------------------------
Confidence 9999999999999999999998873210000
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhc
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 304 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eL 304 (720)
......+||+.|+|||++.+..++.++|||||||++|||
T Consensus 151 -----------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el 189 (316)
T cd05592 151 -----------------------------------------GKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEM 189 (316)
T ss_pred -----------------------------------------CccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHH
Confidence 000114689999999999998899999999999999999
Q ss_pred cc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCCh-HHHHcCcccCCC
Q 004998 305 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKM-GELLQSEFLNEP 367 (720)
Q Consensus 305 lt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta-~eiL~hp~~~~~ 367 (720)
++ ||...... .....+.... +.++...+ ...+|+.+||+.||.+||++ .++++||||...
T Consensus 190 l~G~~Pf~~~~~~-~~~~~i~~~~--~~~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~h~~~~~~ 254 (316)
T cd05592 190 LIGQSPFHGEDED-ELFDSILNDR--PHFPRWISKEAKDCLSKLFERDPTKRLGVDGDIRQHPFFRGI 254 (316)
T ss_pred HhCCCCCCCCCHH-HHHHHHHcCC--CCCCCCCCHHHHHHHHHHccCCHHHcCCChHHHHcCcccCCC
Confidence 99 67655443 3333333221 12222233 44599999999999999986 588899999875
No 89
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=99.97 E-value=9.5e-32 Score=283.38 Aligned_cols=207 Identities=17% Similarity=0.201 Sum_probs=160.0
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC---CCCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~---~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
..|..++..++||||+++++ ++.... .+|++||| .|++|.+++.. ....+++..++.++.||+.||.|||++
T Consensus 41 ~~E~~il~~l~~~~i~~~~~-~~~~~~---~~~lv~e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~ 116 (280)
T cd05608 41 MVEKRILAKVHSRFIVSLAY-AFQTKT---DLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQR 116 (280)
T ss_pred HHHHHHHHhCCCCcEeeeeE-EEcCCC---eEEEEEeCCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 36777999999999999998 554443 57999999 89999988732 334589999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004998 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+||+++.++.++|+|||.+........
T Consensus 117 ~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~-------------------------------------------- 152 (280)
T cd05608 117 RIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQS-------------------------------------------- 152 (280)
T ss_pred CcccCCCCHHHEEECCCCCEEEeeCccceecCCCCc--------------------------------------------
Confidence 999999999999999999999999988733211000
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhh
Q 004998 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
......||+.|+|||++.+..++.++|||||||+
T Consensus 153 ----------------------------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~i 186 (280)
T cd05608 153 ----------------------------------------------KTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVT 186 (280)
T ss_pred ----------------------------------------------cccccCCCcCccCHHHhcCCCCCccccHHHHHHH
Confidence 0001367999999999999999999999999999
Q ss_pred hhhccc---cCCCCchH---HHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCC
Q 004998 301 LFELFC---PFSTGEEK---TRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 367 (720)
Q Consensus 301 l~eLlt---pf~~~~~~---~~~~~~l~~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~ 367 (720)
+|||++ ||...... ......+... +..+....+ ...+|+.+||+.||++|| +++++++||||+..
T Consensus 187 l~el~~g~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h~~~~~~ 263 (280)
T cd05608 187 LYEMIAARGPFRARGEKVENKELKQRILND--SVTYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTHPLFRDL 263 (280)
T ss_pred HHHHHhCCCCCCCCCcchhHHHHHHhhccc--CCCCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcChhhhcC
Confidence 999999 66543221 1111111111 112222333 445999999999999999 88999999999875
No 90
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=99.97 E-value=1e-31 Score=290.09 Aligned_cols=205 Identities=17% Similarity=0.227 Sum_probs=156.4
Q ss_pred hhhhcccC---CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 67 DGVELTHG---DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 67 e~~~Ls~l---~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
|..++... +||||+++++ .+.... .+|+|||| .+++|.+++.+.+ .+++..++.++.||+.||.|||++||
T Consensus 43 e~~~l~~~~~~~~p~i~~~~~-~~~~~~---~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qil~al~~LH~~~i 117 (330)
T cd05586 43 ERNILVRTLLDESPFIVGLKF-SFQTDS---DLYLVTDYMSGGELFWHLQKEG-RFSEDRAKFYIAELVLALEHLHKYDI 117 (330)
T ss_pred HHHHHHHhccCCCCcCcceEE-EEecCC---eEEEEEcCCCCChHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 33444443 7999999999 555443 57999999 8999999995543 49999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.++|+|||++....... .
T Consensus 118 vHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~---------------------------------~------------- 151 (330)
T cd05586 118 VYRDLKPENILLDATGHIALCDFGLSKANLTDN---------------------------------K------------- 151 (330)
T ss_pred EeccCCHHHeEECCCCCEEEecCCcCcCCCCCC---------------------------------C-------------
Confidence 999999999999999999999998873211000 0
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC-CCccccchhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLL 301 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGvll 301 (720)
......||+.|+|||++.+.. ++.++|||||||++
T Consensus 152 --------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil 187 (330)
T cd05586 152 --------------------------------------------TTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLV 187 (330)
T ss_pred --------------------------------------------CccCccCCccccCHHHHcCCCCCCCccceeccccEE
Confidence 001146899999999997654 89999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCC----ChHHHHcCcccCCC
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP----KMGELLQSEFLNEP 367 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rp----ta~eiL~hp~~~~~ 367 (720)
|||++ ||...... ..+..+..+..........+...+|+.+||.+||.+|| ++.++++||||...
T Consensus 188 ~elltG~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h~~~~~~ 259 (330)
T cd05586 188 FEMCCGWSPFYAEDTQ-QMYRNIAFGKVRFPKNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEHPFFADI 259 (330)
T ss_pred EEeccCCCCCCCCCHH-HHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcCccccCC
Confidence 99999 66554333 33444433322111111234456999999999999998 79999999999875
No 91
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=99.97 E-value=1.4e-31 Score=287.56 Aligned_cols=207 Identities=18% Similarity=0.248 Sum_probs=162.8
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+...|..+|.+++||||+++++ ++..+. .+|+|||| .+++|.+++.+.. .+++.+++.++.||+.||.|||++|
T Consensus 44 ~~~~E~~~l~~l~h~niv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lH~~~ 118 (318)
T cd05582 44 RTKMERDILAEVNHPFIVKLHY-AFQTEG---KLYLILDFLRGGDLFTRLSKEV-MFTEEDVKFYLAELALALDHLHSLG 118 (318)
T ss_pred HHHHHHHHHHhCCCCCcccEEE-EEEcCC---EEEEEEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 4456778999999999999999 554443 67999999 8999999995543 4899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.++|+|||++........
T Consensus 119 i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~--------------------------------------------- 153 (318)
T cd05582 119 IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEK--------------------------------------------- 153 (318)
T ss_pred EecCCCCHHHeEECCCCcEEEeeccCCcccCCCCC---------------------------------------------
Confidence 99999999999999999999999988732110000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......||+.|+|||++.+..++.++|||||||++
T Consensus 154 ---------------------------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il 188 (318)
T cd05582 154 ---------------------------------------------KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLM 188 (318)
T ss_pred ---------------------------------------------ceecccCChhhcCHHHHcCCCCCCccceeccceEe
Confidence 00114689999999999988899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccc-cCchHHHHHHHcCCCCCCCCCC-----hHHHHcCcccCCC
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEP 367 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~-~~p~~~~li~~~L~~dP~~Rpt-----a~eiL~hp~~~~~ 367 (720)
|||++ ||...... ..+..+...... ++. ..+...+||.+||++||.+||+ +.+++.||||...
T Consensus 189 ~el~tg~~p~~~~~~~-~~~~~i~~~~~~--~p~~~~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~~~~~~~ 260 (318)
T cd05582 189 FEMLTGSLPFQGKDRK-ETMTMILKAKLG--MPQFLSPEAQSLLRALFKRNPANRLGAGPDGVEEIKRHPFFSTI 260 (318)
T ss_pred eeeccCCCCCCCCCHH-HHHHHHHcCCCC--CCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCCCCcCCC
Confidence 99999 66654433 333333322211 112 2344569999999999999999 6779999999875
No 92
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=99.97 E-value=1.7e-31 Score=293.20 Aligned_cols=214 Identities=18% Similarity=0.233 Sum_probs=160.2
Q ss_pred eeeehhhhcccCCCCCceecccceeecCC--CCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEA--AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~--~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+..+|..+|..++||||+++++ ++.... ....+|++|||.+++|.+++.... .+++..++.++.||+.||.|||++
T Consensus 45 ~~~~E~~~l~~l~h~niv~~~~-~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~-~l~~~~~~~~~~qi~~aL~~LH~~ 122 (372)
T cd07853 45 RVFRELKMLCFFKHDNVLSALD-ILQPPHIDPFEEIYVVTELMQSDLHKIIVSPQ-PLSSDHVKVFLYQILRGLKYLHSA 122 (372)
T ss_pred HHHHHHHHHHhCCCCCcCCHhh-eecCCCccccceEEEEeeccccCHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHhC
Confidence 4457888999999999999999 444332 122579999997789999885543 599999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004998 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+|||++.++.+||+|||++........ .
T Consensus 123 ~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~~-------------------------------------~------ 159 (372)
T cd07853 123 GILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDES-------------------------------------K------ 159 (372)
T ss_pred CeeCCCCChHHEEECCCCCEEeccccceeecccCcc-------------------------------------c------
Confidence 999999999999999999999999888743211000 0
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC-CCccccchhhhh
Q 004998 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGV 299 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGv 299 (720)
......+|++|+|||++.+.. ++.++|||||||
T Consensus 160 ----------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~ 193 (372)
T cd07853 160 ----------------------------------------------HMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGC 193 (372)
T ss_pred ----------------------------------------------cCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHH
Confidence 001135789999999998754 799999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHH----------------------h-hcCCCCccc------c-ccCchHHHHHHHcCC
Q 004998 300 LLFELFC---PFSTGEEKTRTMSS----------------------L-RHRVLPPQL------L-LKFPKEASFCLWLLH 346 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~----------------------l-~~~~~p~~~------~-~~~p~~~~li~~~L~ 346 (720)
++|||++ ||............ + .....++.. . ...+...+||.+||+
T Consensus 194 il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~ 273 (372)
T cd07853 194 IFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLV 273 (372)
T ss_pred HHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCC
Confidence 9999999 66554332111100 1 111111111 1 122344599999999
Q ss_pred CCCCCCCChHHHHcCcccCCC
Q 004998 347 PEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 347 ~dP~~Rpta~eiL~hp~~~~~ 367 (720)
+||.+|||+.|+|+||||...
T Consensus 274 ~dP~~R~t~~e~l~hp~~~~~ 294 (372)
T cd07853 274 FDPDKRISAADALAHPYLDEG 294 (372)
T ss_pred CChhhCcCHHHHhcCHhhCCC
Confidence 999999999999999999886
No 93
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=9.8e-32 Score=284.10 Aligned_cols=205 Identities=19% Similarity=0.288 Sum_probs=162.6
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|...+.-+.|||||+||+ +..... .+|+++|+ .+|+|.+||-++...+.+..+++||.||+.|+.|+|+..|||
T Consensus 66 qEVRCMKLVQHpNiVRLYE-ViDTQT---KlyLiLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVVH 141 (864)
T KOG4717|consen 66 QEVRCMKLVQHPNIVRLYE-VIDTQT---KLYLILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVVH 141 (864)
T ss_pred HHHHHHHHhcCcCeeeeee-hhcccc---eEEEEEEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhhc
Confidence 5666788889999999999 443332 68999999 889999999777777999999999999999999999999999
Q ss_pred ccCCCCcEEEc-cCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 145 HNVRPSCFVMS-SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 145 rDLKP~NILl~-~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
|||||+|+++- .-|-|||.|||++-.|..-
T Consensus 142 RDLKPENVVFFEKlGlVKLTDFGFSNkf~PG------------------------------------------------- 172 (864)
T KOG4717|consen 142 RDLKPENVVFFEKLGLVKLTDFGFSNKFQPG------------------------------------------------- 172 (864)
T ss_pred ccCCcceeEEeeecCceEeeeccccccCCCc-------------------------------------------------
Confidence 99999998876 6788999888876221000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCC-ccccchhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVS-CASDIYRLGVLLF 302 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s-~~sDIwSLGvll~ 302 (720)
.+-+..+|+..|-|||++.|..|+ +++||||||||||
T Consensus 173 ------------------------------------------~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILy 210 (864)
T KOG4717|consen 173 ------------------------------------------KKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILY 210 (864)
T ss_pred ------------------------------------------chhhcccchhhccCchhhhcCccCCcchhhhHHHHHHH
Confidence 011225899999999999999985 6899999999999
Q ss_pred hccc---cCCCCchHHHHHHHhh-cCCCCccccccCchHH-HHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004998 303 ELFC---PFSTGEEKTRTMSSLR-HRVLPPQLLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~-~~~~p~~~~~~~p~~~-~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
.|+| ||...+.....-..+. +...|... ++++ +||..||..||.+|.+.+||..++|++....
T Consensus 211 MLVCGq~PFqeANDSETLTmImDCKYtvPshv----S~eCrdLI~sMLvRdPkkRAslEeI~s~~Wlq~~D~ 278 (864)
T KOG4717|consen 211 MLVCGQPPFQEANDSETLTMIMDCKYTVPSHV----SKECRDLIQSMLVRDPKKRASLEEIVSTSWLQAGDR 278 (864)
T ss_pred HHHhCCCccccccchhhhhhhhcccccCchhh----hHHHHHHHHHHHhcCchhhccHHHHhccccccCCCC
Confidence 9999 7765544432222222 23334333 4444 9999999999999999999999999998744
No 94
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=99.97 E-value=1.3e-31 Score=287.79 Aligned_cols=204 Identities=20% Similarity=0.275 Sum_probs=158.5
Q ss_pred ehhhhccc-CCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 66 SDGVELTH-GDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~Ls~-l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.|..++.. ++||||+++++ ++.+.. .+|+|||| .|++|.+++... ..+++.++..++.||+.||.|||++||+
T Consensus 44 ~e~~~l~~~~~hp~iv~~~~-~~~~~~---~~~lv~ey~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~al~~LH~~~iv 118 (316)
T cd05619 44 VEKRVLSLAWEHPFLTHLYC-TFQTKE---NLFFVMEYLNGGDLMFHIQSC-HKFDLPRATFYAAEIICGLQFLHSKGIV 118 (316)
T ss_pred HHHHHHHhccCCCcCcceEE-EEEeCC---EEEEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCeE
Confidence 34445554 69999999999 554443 58999999 899999999554 3489999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.++|+|||++...... +-
T Consensus 119 Hrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~----------------------------------~~------------- 151 (316)
T cd05619 119 YRDLKLDNILLDTDGHIKIADFGMCKENMLG----------------------------------DA------------- 151 (316)
T ss_pred eCCCCHHHEEECCCCCEEEccCCcceECCCC----------------------------------CC-------------
Confidence 9999999999999999999999877321000 00
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......||+.|+|||++.+..++.++|||||||++||
T Consensus 152 -------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~e 188 (316)
T cd05619 152 -------------------------------------------KTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYE 188 (316)
T ss_pred -------------------------------------------ceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHH
Confidence 0011468999999999998889999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChH-HHHcCcccCCC
Q 004998 304 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMG-ELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rpta~-eiL~hp~~~~~ 367 (720)
|++ ||...... .....+.... +.++... .+..+|+.+||+.||.+||++. ++++||||...
T Consensus 189 l~~G~~pf~~~~~~-~~~~~i~~~~--~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~h~~~~~~ 254 (316)
T cd05619 189 MLIGQSPFHGHDEE-ELFQSIRMDN--PCYPRWLTREAKDILVKLFVREPERRLGVKGDIRQHPFFREI 254 (316)
T ss_pred HHhCCCCCCCCCHH-HHHHHHHhCC--CCCCccCCHHHHHHHHHHhccCHhhcCCChHHHHcCcccCCC
Confidence 999 66554433 3333333221 1122223 3445999999999999999996 89999999886
No 95
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=99.97 E-value=1.8e-31 Score=288.86 Aligned_cols=206 Identities=18% Similarity=0.230 Sum_probs=155.2
Q ss_pred eeehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC--------------------------
Q 004998 64 KHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-------------------------- 115 (720)
Q Consensus 64 ~~~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~-------------------------- 115 (720)
...|..+|.++ +|||||++++ ++.... ..++++||| .+|+|.++|....
T Consensus 57 ~~~E~~~l~~l~~h~niv~~~~-~~~~~~--~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (338)
T cd05102 57 LMSELKILIHIGNHLNVVNLLG-ACTKPN--GPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRV 133 (338)
T ss_pred HHHHHHHHHHhccCcceeeEEe-EecCCC--CceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhcc
Confidence 34677788888 8999999999 443322 257999999 9999999995321
Q ss_pred -----------------------------------CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEccCCce
Q 004998 116 -----------------------------------RSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHV 160 (720)
Q Consensus 116 -----------------------------------~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~v 160 (720)
..+++.++..++.||+.||.|||++||+||||||+|||++.++.+
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~ 213 (338)
T cd05102 134 DRRIEAGQASVLFSRFQPSTSGSTNPPQETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVV 213 (338)
T ss_pred ccccccccCCccccccccccCcccccchhccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcE
Confidence 247788999999999999999999999999999999999999999
Q ss_pred EEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccCCCcccccccccc
Q 004998 161 SFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVE 240 (720)
Q Consensus 161 kliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~ 240 (720)
||+|||+++...... .+
T Consensus 214 kl~DfG~a~~~~~~~---------------------------------~~------------------------------ 230 (338)
T cd05102 214 KICDFGLARDIYKDP---------------------------------DY------------------------------ 230 (338)
T ss_pred EEeecccccccccCc---------------------------------ch------------------------------
Confidence 999998874321100 00
Q ss_pred ccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhccc----cCCCCchHHH
Q 004998 241 GMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTR 316 (720)
Q Consensus 241 ~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~ 316 (720)
. ......+++.|+|||++.+..++.++|||||||+||||++ ||........
T Consensus 231 -------~------------------~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~ 285 (338)
T cd05102 231 -------V------------------RKGSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEE 285 (338)
T ss_pred -------h------------------cccCCCCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHH
Confidence 0 0001245778999999998889999999999999999986 6655433333
Q ss_pred HHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 317 TMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 317 ~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
....+..+..+.......+...+|+.+||+.||.+|||+.|+++
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~el~~ 329 (338)
T cd05102 286 FCQRLKDGTRMRAPENATPEIYRIMLACWQGDPKERPTFSALVE 329 (338)
T ss_pred HHHHHhcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 33444443333222223345569999999999999999999985
No 96
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=99.97 E-value=1.2e-31 Score=288.06 Aligned_cols=204 Identities=19% Similarity=0.247 Sum_probs=159.6
Q ss_pred ehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 66 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
+|..++..+ +||||+++++ ++.... .+|+|||| .|++|..++.+.. .+++..+..++.||+.||.|||++||+
T Consensus 44 ~e~~il~~~~~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~-~l~~~~~~~~~~qi~~~l~~LH~~~iv 118 (318)
T cd05570 44 TEKRVLALAGKHPFLTQLHS-CFQTKD---RLFFVMEYVNGGDLMFHIQRSG-RFDEPRARFYAAEIVLGLQFLHERGII 118 (318)
T ss_pred HHHHHHHhccCCCCccceee-EEEcCC---EEEEEEcCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhCCeE
Confidence 555566665 7999999999 555543 68999999 8999999985543 499999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.++|+|||++...... +.
T Consensus 119 H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----------------------------------~~------------- 151 (318)
T cd05570 119 YRDLKLDNVLLDSEGHIKIADFGMCKEGILG----------------------------------GV------------- 151 (318)
T ss_pred ccCCCHHHeEECCCCcEEecccCCCeecCcC----------------------------------CC-------------
Confidence 9999999999999999999999877321000 00
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
.....+||+.|+|||++.+..++.++|||||||++|+
T Consensus 152 -------------------------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~ 188 (318)
T cd05570 152 -------------------------------------------TTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYE 188 (318)
T ss_pred -------------------------------------------cccceecCccccCHHHhcCCCCCcchhhhhHHHHHHH
Confidence 0011368999999999999889999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCCh-----HHHHcCcccCCC
Q 004998 304 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKM-----GELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rpta-----~eiL~hp~~~~~ 367 (720)
|++ ||...... .....+..... .++... +...+|+.+||+.||.+||++ .++++||||...
T Consensus 189 l~~G~~pf~~~~~~-~~~~~i~~~~~--~~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~~~~~~~ 258 (318)
T cd05570 189 MLAGQSPFEGDDED-ELFQSILEDEV--RYPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGHPFFREI 258 (318)
T ss_pred HhhCCCCCCCCCHH-HHHHHHHcCCC--CCCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence 999 67654433 33333332211 112223 344599999999999999999 999999999875
No 97
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=99.97 E-value=2.7e-31 Score=286.02 Aligned_cols=201 Identities=18% Similarity=0.209 Sum_probs=157.7
Q ss_pred hcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCC
Q 004998 70 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 148 (720)
Q Consensus 70 ~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLK 148 (720)
++..++||||+++++ .+.... .+|+|||| .|++|..++.+. ..+++..++.++.||+.||.|||++||+|||||
T Consensus 49 ~~~~l~hp~iv~~~~-~~~~~~---~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~givH~dik 123 (323)
T cd05575 49 LLKNVKHPFLVGLHY-SFQTAD---KLYFVLDYVNGGELFFHLQRE-RSFPEPRARFYAAEIASALGYLHSLNIIYRDLK 123 (323)
T ss_pred HHhhCCCCCCCCeeE-EEEeCC---EEEEEEcCCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCC
Confidence 567899999999998 554443 67999999 899999999554 358999999999999999999999999999999
Q ss_pred CCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccC
Q 004998 149 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 228 (720)
Q Consensus 149 P~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~ 228 (720)
|+|||++.++.+||+|||++....... +
T Consensus 124 p~NIll~~~~~~kl~Dfg~~~~~~~~~---------------------------------~------------------- 151 (323)
T cd05575 124 PENILLDSQGHVVLTDFGLCKEGIEHS---------------------------------K------------------- 151 (323)
T ss_pred HHHeEECCCCcEEEeccCCCcccccCC---------------------------------C-------------------
Confidence 999999999999999998873210000 0
Q ss_pred CCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhccc--
Q 004998 229 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 306 (720)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt-- 306 (720)
......||+.|+|||++.+..++.++|||||||++|||++
T Consensus 152 --------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~ 193 (323)
T cd05575 152 --------------------------------------TTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGL 193 (323)
T ss_pred --------------------------------------ccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCC
Confidence 0011468999999999999889999999999999999999
Q ss_pred -cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCCh----HHHHcCcccCCC
Q 004998 307 -PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM----GELLQSEFLNEP 367 (720)
Q Consensus 307 -pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta----~eiL~hp~~~~~ 367 (720)
||...... ..+..+...... ......+...+||.+||+.||.+||++ .++++||||...
T Consensus 194 ~pf~~~~~~-~~~~~i~~~~~~-~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~il~~~~~~~~ 257 (323)
T cd05575 194 PPFYSRDTA-EMYDNILNKPLR-LKPNISVSARHLLEGLLQKDRTKRLGAKDDFLEIKNHVFFSSI 257 (323)
T ss_pred CCCCCCCHH-HHHHHHHcCCCC-CCCCCCHHHHHHHHHHhhcCHHhCCCCCCCHHHHHcCCCcCCC
Confidence 66654433 333333332211 111223455699999999999999987 699999999875
No 98
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=99.97 E-value=1e-31 Score=295.43 Aligned_cols=205 Identities=20% Similarity=0.291 Sum_probs=156.2
Q ss_pred ehhhhcccCC-C-----CCceecccceeecCCCCCcEEEEEecCCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHH
Q 004998 66 SDGVELTHGD-H-----LRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 66 ~e~~~Ls~l~-H-----pnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
.|+.+|.+|+ | -|||++++.++ ... ++|||+|+.+.+|.++|+. ...+++...++.|+.||+.||.+||
T Consensus 231 ~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~-fr~---HlciVfELL~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~ 306 (586)
T KOG0667|consen 231 IEIRILELLNKHDPDDKYNIVRMLDYFY-FRN---HLCIVFELLSTNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLH 306 (586)
T ss_pred HHHHHHHHHhccCCCCCeeEEEeeeccc-ccc---ceeeeehhhhhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 7788888887 3 48999999433 333 7899999999999999943 4456999999999999999999999
Q ss_pred HcCceeccCCCCcEEEccC--CceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCC
Q 004998 139 SQGIVVHNVRPSCFVMSSF--NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 216 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~~~--~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~ 216 (720)
+.||||+||||+||||... ..||+||||+++..+.-.
T Consensus 307 ~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q~v----------------------------------------- 345 (586)
T KOG0667|consen 307 ELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQRV----------------------------------------- 345 (586)
T ss_pred hCCeeeccCChhheeeccCCcCceeEEecccccccCCcc-----------------------------------------
Confidence 9999999999999999843 479999999885432110
Q ss_pred CCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchh
Q 004998 217 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYR 296 (720)
Q Consensus 217 ~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwS 296 (720)
..++.+..|+|||++.|.+|+.+.||||
T Consensus 346 ----------------------------------------------------ytYiQSRfYRAPEVILGlpY~~~IDmWS 373 (586)
T KOG0667|consen 346 ----------------------------------------------------YTYIQSRFYRAPEVILGLPYDTAIDMWS 373 (586)
T ss_pred ----------------------------------------------------eeeeeccccccchhhccCCCCCccceee
Confidence 0156688999999999999999999999
Q ss_pred hhhhhhhccc--cCCCCchHHHHHHHhhc--CCCCccccc----------------------------------------
Q 004998 297 LGVLLFELFC--PFSTGEEKTRTMSSLRH--RVLPPQLLL---------------------------------------- 332 (720)
Q Consensus 297 LGvll~eLlt--pf~~~~~~~~~~~~l~~--~~~p~~~~~---------------------------------------- 332 (720)
||||++||++ |+.+.+.....+..|.. +.+|+.++.
T Consensus 374 LGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~ 453 (586)
T KOG0667|consen 374 LGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKA 453 (586)
T ss_pred hhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHhccccceehhccCCceeeeeeecccccccchhhhhhhhhh
Confidence 9999999999 43333222222222211 111110000
Q ss_pred ----cCc----------------hHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 333 ----KFP----------------KEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 333 ----~~p----------------~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
..| ...+|+++||.+||..|+|+.++|+||||.+.
T Consensus 454 ~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp~qal~Hpfl~~~ 508 (586)
T KOG0667|consen 454 RLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERITPAQALNHPFLTGT 508 (586)
T ss_pred cccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCCHHHHhcCcccccc
Confidence 001 12489999999999999999999999999965
No 99
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=99.97 E-value=2.7e-31 Score=291.49 Aligned_cols=206 Identities=17% Similarity=0.223 Sum_probs=158.0
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
+|..+++.++||||+++++ ++.++. .+|+|||| .|++|.+++... .+++..++.++.||+.||.|||++||+|
T Consensus 92 ~e~~i~~~~~hp~iv~~~~-~~~~~~---~~~lv~Ey~~gg~L~~~l~~~--~~~~~~~~~~~~qil~aL~~LH~~~IvH 165 (370)
T cd05621 92 EERDIMAFANSPWVVQLFC-AFQDDK---YLYMVMEYMPGGDLVNLMSNY--DVPEKWAKFYTAEVVLALDAIHSMGLIH 165 (370)
T ss_pred HHHHHHHhCCCCCEeeEEE-EEEcCC---EEEEEEcCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCCeEe
Confidence 5677889999999999999 555543 68999999 899999999543 3899999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+|||++.++.+||+|||++........ .
T Consensus 166 rDLKp~NILl~~~~~~kL~DFG~a~~~~~~~~---------------------------------~-------------- 198 (370)
T cd05621 166 RDVKPDNMLLDKHGHLKLADFGTCMKMDETGM---------------------------------V-------------- 198 (370)
T ss_pred cCCCHHHEEECCCCCEEEEecccceecccCCc---------------------------------e--------------
Confidence 99999999999999999999998743211100 0
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC----CCccccchhhhhh
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP----VSCASDIYRLGVL 300 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~----~s~~sDIwSLGvl 300 (720)
.....+||+.|+|||++.+.. ++.++|||||||+
T Consensus 199 ------------------------------------------~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~i 236 (370)
T cd05621 199 ------------------------------------------RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVF 236 (370)
T ss_pred ------------------------------------------ecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHH
Confidence 001146899999999997643 7899999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCC---ccccccCchHHHHHHHcCCCCCCC--CCChHHHHcCcccCCC
Q 004998 301 LFELFC---PFSTGEEKTRTMSSLRHRVLP---PQLLLKFPKEASFCLWLLHPEPSG--RPKMGELLQSEFLNEP 367 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p---~~~~~~~p~~~~li~~~L~~dP~~--Rpta~eiL~hp~~~~~ 367 (720)
+|||++ ||...... ..+..+...... |......+...+|+.+||..+|.+ |+++.|+++||||+..
T Consensus 237 lyell~G~~Pf~~~~~~-~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp~~~~~ 310 (370)
T cd05621 237 LFEMLVGDTPFYADSLV-GTYSKIMDHKNSLNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPFFKND 310 (370)
T ss_pred HHHHHhCCCCCCCCCHH-HHHHHHHhCCcccCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcCcccCCC
Confidence 999999 67655443 233333322111 111122344559999999865543 8999999999999874
No 100
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=99.97 E-value=2.3e-31 Score=284.95 Aligned_cols=212 Identities=17% Similarity=0.191 Sum_probs=151.4
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhC--------CCCCCCHHHHHHHHHHHHHHHH
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK--------PKRSVDVYECLHIFRQIVEIVY 135 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~--------~~~~l~~~~~~~i~~QIl~aL~ 135 (720)
..+|..+|++++||||+++++ ++.... ...+|++|||.+++|.+++.. ....+++..++.++.||+.||.
T Consensus 45 ~~~E~~~l~~l~h~niv~~~~-~~~~~~-~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~ 122 (317)
T cd07867 45 ACREIALLRELKHPNVIALQK-VFLSHS-DRKVWLLFDYAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIH 122 (317)
T ss_pred HHHHHHHHHhCCCCCeeeEEE-EEeccC-CCeEEEEEeeeCCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHH
Confidence 346888999999999999999 443322 236899999977899988832 1224889999999999999999
Q ss_pred HHHHcCceeccCCCCcEEE----ccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccc
Q 004998 136 AAHSQGIVVHNVRPSCFVM----SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQ 211 (720)
Q Consensus 136 yLHs~gIvHrDLKP~NILl----~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfg 211 (720)
|||++||+||||||+|||+ +.++.+||+|||+++..+..... .
T Consensus 123 ~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~--------------------------------~- 169 (317)
T cd07867 123 YLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKP--------------------------------L- 169 (317)
T ss_pred HHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccceeccCCCccc--------------------------------c-
Confidence 9999999999999999999 45678999999888543211000 0
Q ss_pred cccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC-CCc
Q 004998 212 LVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSC 290 (720)
Q Consensus 212 la~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~ 290 (720)
.......||+.|+|||++.+.. ++.
T Consensus 170 ------------------------------------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~ 195 (317)
T cd07867 170 ------------------------------------------------------ADLDPVVVTFWYRAPELLLGARHYTK 195 (317)
T ss_pred ------------------------------------------------------cccCcceecccccCcHHhcCCCccCc
Confidence 0001146799999999997754 899
Q ss_pred cccchhhhhhhhhccc---cCCCCchH---------HHH---H-----------HHhhc-------------CCCC-ccc
Q 004998 291 ASDIYRLGVLLFELFC---PFSTGEEK---------TRT---M-----------SSLRH-------------RVLP-PQL 330 (720)
Q Consensus 291 ~sDIwSLGvll~eLlt---pf~~~~~~---------~~~---~-----------~~l~~-------------~~~p-~~~ 330 (720)
++|||||||++|||++ ||...... ... . ..+.. .... +..
T Consensus 196 ~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (317)
T cd07867 196 AIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSL 275 (317)
T ss_pred HHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHHhcCCCChhhhhhhhhcccchhhhhhhcccccCCchh
Confidence 9999999999999999 55422110 000 0 00000 0000 000
Q ss_pred --------cccCchHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004998 331 --------LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 331 --------~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
....+...+|+.+||..||.+|||+.|+|+||||
T Consensus 276 ~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07867 276 IKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDPYF 317 (317)
T ss_pred hhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 0011234489999999999999999999999998
No 101
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=6.8e-32 Score=293.24 Aligned_cols=225 Identities=20% Similarity=0.247 Sum_probs=174.9
Q ss_pred ccccccCCCCccce--eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCC--CHHHH
Q 004998 49 RFGVRGDDSNDFEL--RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSV--DVYEC 123 (720)
Q Consensus 49 ~~~~~~~~~~~~~~--r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l--~~~~~ 123 (720)
||.+..-...++++ --+.|+.+-++|+|.|||+++|.+-+.+ ++-|.||- +||+|..+|+..-+++ ++..+
T Consensus 602 rIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senG----f~kIFMEqVPGGSLSsLLrskWGPlKDNEstm 677 (1226)
T KOG4279|consen 602 RIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENG----FFKIFMEQVPGGSLSSLLRSKWGPLKDNESTM 677 (1226)
T ss_pred EEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCC----eEEEEeecCCCCcHHHHHHhccCCCccchhHH
Confidence 44444444444443 3447777788899999999999432333 78899999 9999999998877778 89999
Q ss_pred HHHHHHHHHHHHHHHHcCceeccCCCCcEEEc-cCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhh
Q 004998 124 LHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMS-SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRR 202 (720)
Q Consensus 124 ~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~-~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r 202 (720)
-.|.+||++||.|||.+.|||||||-+|+|++ -+|.+||.|||.++...
T Consensus 678 ~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLA------------------------------ 727 (1226)
T KOG4279|consen 678 NFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLA------------------------------ 727 (1226)
T ss_pred HHHHHHHHHHhhhhhhcceeeccccCCcEEEeeccceEEecccccchhhc------------------------------
Confidence 99999999999999999999999999999997 68999999999884321
Q ss_pred hcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCcc
Q 004998 203 TRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEE 282 (720)
Q Consensus 203 ~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~ 282 (720)
.. .|.+. ...||..|||||+
T Consensus 728 ------gi-----------------------------------------------------nP~TE-TFTGTLQYMAPEv 747 (1226)
T KOG4279|consen 728 ------GI-----------------------------------------------------NPCTE-TFTGTLQYMAPEV 747 (1226)
T ss_pred ------cC-----------------------------------------------------Ccccc-ccccchhhhChHh
Confidence 00 01111 1579999999999
Q ss_pred ccCCC--CCccccchhhhhhhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchH-HHHHHHcCCCCCCCCCChH
Q 004998 283 LAGAP--VSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKE-ASFCLWLLHPEPSGRPKMG 356 (720)
Q Consensus 283 l~~~~--~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~-~~li~~~L~~dP~~Rpta~ 356 (720)
+..++ |+.++|||||||++.||.| ||........+|-.+.--...|.++...+.+ ..||++|+.+||.+||+|.
T Consensus 748 IDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkVGmyKvHP~iPeelsaeak~FilrcFepd~~~R~sA~ 827 (1226)
T KOG4279|consen 748 IDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKVGMYKVHPPIPEELSAEAKNFILRCFEPDPCDRPSAK 827 (1226)
T ss_pred hccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhhcceecCCCCcHHHHHHHHHHHHHHcCCCcccCccHH
Confidence 98776 9999999999999999999 6655544555555554333333444444444 4999999999999999999
Q ss_pred HHHcCcccCCC
Q 004998 357 ELLQSEFLNEP 367 (720)
Q Consensus 357 eiL~hp~~~~~ 367 (720)
++|+.||++..
T Consensus 828 ~LL~DpFlq~~ 838 (1226)
T KOG4279|consen 828 DLLQDPFLQHN 838 (1226)
T ss_pred HhccCcccccC
Confidence 99999999876
No 102
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.97 E-value=9.1e-32 Score=293.14 Aligned_cols=209 Identities=20% Similarity=0.229 Sum_probs=177.7
Q ss_pred eeeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004998 62 LRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 62 ~r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
-|...|+.+|..|+|||||++|+.|..... ..+.+|.|+ ..|+|++|+++.++ ++...++.|++||+.||.|||++
T Consensus 86 eR~~~Ev~lLKsL~H~NIirfy~SW~d~~n--~~in~iTEL~TSGtLr~Y~kk~~~-vn~kaik~W~RQILkGL~yLHs~ 162 (632)
T KOG0584|consen 86 ERLYSEVHLLKSLKHPNIIRFYDSWVDTDN--KTINFITELFTSGTLREYRKKHRR-VNIKAIKSWCRQILKGLVYLHSQ 162 (632)
T ss_pred HHHHHHHHHHccCCCCceeeeeeheecCCC--ceeeeeeecccCCcHHHHHHHhcc-CCHHHHHHHHHHHHHHhhhhhcC
Confidence 367788899999999999999995554443 467899999 99999999976655 99999999999999999999997
Q ss_pred --CceeccCCCCcEEEc-cCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCC
Q 004998 141 --GIVVHNVRPSCFVMS-SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 141 --gIvHrDLKP~NILl~-~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~ 217 (720)
.|||||||.+||+|+ ..|.|||.|+|+| ....
T Consensus 163 ~PPIIHRDLKCDNIFinG~~G~VKIGDLGLA---------------------------------------------tl~r 197 (632)
T KOG0584|consen 163 DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLA---------------------------------------------TLLR 197 (632)
T ss_pred CCCccccccccceEEEcCCcCceeecchhHH---------------------------------------------HHhh
Confidence 699999999999998 5688999666655 2211
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhh
Q 004998 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRL 297 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSL 297 (720)
.. .....+|||.|||||++. ..|...+|||||
T Consensus 198 ~s-----------------------------------------------~aksvIGTPEFMAPEmYE-E~YnE~VDVYaF 229 (632)
T KOG0584|consen 198 KS-----------------------------------------------HAKSVIGTPEFMAPEMYE-ENYNELVDVYAF 229 (632)
T ss_pred cc-----------------------------------------------ccceeccCccccChHHHh-hhcchhhhhhhh
Confidence 10 011258999999999997 449999999999
Q ss_pred hhhhhhccc---cCCCCchHHHHHHHhhcCCCCccccc-cCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 298 GVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 298 Gvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~-~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|+.+.||+| ||........+++.+..++.|..+.. ..|...+||.+||.. .+.|||+.|+|.||||...
T Consensus 230 GMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~sl~kV~dPevr~fIekCl~~-~~~R~sa~eLL~d~Ff~~d 302 (632)
T KOG0584|consen 230 GMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKPAALSKVKDPEVREFIEKCLAT-KSERLSAKELLKDPFFDED 302 (632)
T ss_pred hHHHHHHHhccCChhhhCCHHHHHHHHHcCCCHHHhhccCCHHHHHHHHHHhcC-chhccCHHHHhhChhhccc
Confidence 999999999 89888888999999999999887755 456677999999999 9999999999999999986
No 103
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=99.97 E-value=5.2e-31 Score=277.31 Aligned_cols=207 Identities=16% Similarity=0.195 Sum_probs=159.2
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.|..++.+++||||+++++ .++.+. .+|++||| .|++|.+++.. ....+++..+..++.||+.||.|||+.||+
T Consensus 42 ~E~~il~~l~hp~i~~~~~-~~~~~~---~~~lv~e~~~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~iv 117 (277)
T cd05607 42 LEKEILEKVNSPFIVNLAY-AFESKT---HLCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIV 117 (277)
T ss_pred HHHHHHHhcCCCcEEEEEE-EEecCC---eEEEEEecCCCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEE
Confidence 4677999999999999998 555443 68999999 89999998843 334589999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+||+++.++.++|+|||.+.......
T Consensus 118 H~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~------------------------------------------------ 149 (277)
T cd05607 118 YRDMKPENVLLDDQGNCRLSDLGLAVELKDGK------------------------------------------------ 149 (277)
T ss_pred EccCChHhEEEcCCCCEEEeeceeeeecCCCc------------------------------------------------
Confidence 99999999999999999999998773221100
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......||+.|+|||++.+..++.++|||||||++||
T Consensus 150 -------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~e 186 (277)
T cd05607 150 -------------------------------------------TITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYE 186 (277)
T ss_pred -------------------------------------------eeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHH
Confidence 0001357899999999998889999999999999999
Q ss_pred ccc---cCCCCchH---HHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCCh----HHHHcCcccCCC
Q 004998 304 LFC---PFSTGEEK---TRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM----GELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~~~---~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta----~eiL~hp~~~~~ 367 (720)
|++ ||...... ............+.......+...+|+.+||.+||.+||++ .+++.||||...
T Consensus 187 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~~h~~f~~~ 260 (277)
T cd05607 187 MVAGRTPFKDHKEKVAKEELKRRTLEDEVKFEHQNFTEESKDICRLFLAKKPEDRLGSREKNDDPRKHEFFKTI 260 (277)
T ss_pred HHhCCCCCCCCcchhhHHHHHHHhhccccccccccCCHHHHHHHHHHhccCHhhCCCCccchhhhhcChhhcCC
Confidence 999 66543221 12222222222221112233455699999999999999999 677899999875
No 104
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=99.97 E-value=4.1e-31 Score=284.66 Aligned_cols=201 Identities=15% Similarity=0.197 Sum_probs=157.7
Q ss_pred hhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCceecc
Q 004998 68 GVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 146 (720)
Q Consensus 68 ~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrD 146 (720)
..++..++||||+++++ ++.... .+|+|||| .|++|..++... .+++..++.++.||+.||.|||++||+|||
T Consensus 53 ~~~~~~l~hp~i~~~~~-~~~~~~---~~~lv~E~~~~~~L~~~~~~~--~l~~~~~~~~~~qi~~al~~lH~~~ivHrd 126 (324)
T cd05589 53 FETANSERHPFLVNLFA-CFQTED---HVCFVMEYAAGGDLMMHIHTD--VFSEPRAVFYAACVVLGLQYLHENKIVYRD 126 (324)
T ss_pred HHhccccCCCChhceee-EEEcCC---EEEEEEcCCCCCcHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeEecC
Confidence 34567889999999999 555543 68999999 999999988542 499999999999999999999999999999
Q ss_pred CCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccc
Q 004998 147 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 226 (720)
Q Consensus 147 LKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~ 226 (720)
|||+|||++.++.+||+|||++.......
T Consensus 127 lkp~Nill~~~~~~kL~Dfg~~~~~~~~~--------------------------------------------------- 155 (324)
T cd05589 127 LKLDNLLLDTEGFVKIADFGLCKEGMGFG--------------------------------------------------- 155 (324)
T ss_pred CCHHHeEECCCCcEEeCcccCCccCCCCC---------------------------------------------------
Confidence 99999999999999999998873210000
Q ss_pred cCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhccc
Q 004998 227 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC 306 (720)
Q Consensus 227 q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt 306 (720)
......+||+.|+|||.+.+..++.++|||||||++|||++
T Consensus 156 ---------------------------------------~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~ 196 (324)
T cd05589 156 ---------------------------------------DRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLV 196 (324)
T ss_pred ---------------------------------------CcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHh
Confidence 00011468999999999998889999999999999999999
Q ss_pred ---cCCCCchHHHHHHHhhcCCCCcccccc-CchHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCC
Q 004998 307 ---PFSTGEEKTRTMSSLRHRVLPPQLLLK-FPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 367 (720)
Q Consensus 307 ---pf~~~~~~~~~~~~l~~~~~p~~~~~~-~p~~~~li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~ 367 (720)
||...... .....+..... .++.. .+...+||.+||+.||.+|| ++.++++||||...
T Consensus 197 G~~pf~~~~~~-~~~~~i~~~~~--~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~~f~~~ 263 (324)
T cd05589 197 GESPFPGDDEE-EVFDSIVNDEV--RYPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQPFFRDI 263 (324)
T ss_pred CCCCCCCCCHH-HHHHHHHhCCC--CCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCCCcCCC
Confidence 66655443 23333332211 11122 34456999999999999999 69999999999875
No 105
>PHA03207 serine/threonine kinase US3; Provisional
Probab=99.97 E-value=3.1e-31 Score=293.39 Aligned_cols=210 Identities=14% Similarity=0.168 Sum_probs=158.5
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.+|..+|.+++|||||++++ ++.... .+|++||+.+++|.+++.. ...+++.+++.|+.||+.||.|||++||||
T Consensus 134 ~~E~~il~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~l~~~l~~-~~~l~~~~~~~i~~ql~~aL~~LH~~givH 208 (392)
T PHA03207 134 GREIDILKTISHRAIINLIH-AYRWKS---TVCMVMPKYKCDLFTYVDR-SGPLPLEQAITIQRRLLEALAYLHGRGIIH 208 (392)
T ss_pred HHHHHHHHhcCCCCccceee-eEeeCC---EEEEEehhcCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 36888999999999999999 554433 6799999977899999943 345999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+|||++.++.++|+|||++.........
T Consensus 209 rDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~----------------------------------------------- 241 (392)
T PHA03207 209 RDVKTENIFLDEPENAVLGDFGAACKLDAHPDT----------------------------------------------- 241 (392)
T ss_pred cCCCHHHEEEcCCCCEEEccCccccccCccccc-----------------------------------------------
Confidence 999999999999999999999987432111000
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhc
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 304 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eL 304 (720)
.......||+.|+|||++.+..++.++|||||||++|||
T Consensus 242 -----------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el 280 (392)
T PHA03207 242 -----------------------------------------PQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEM 280 (392)
T ss_pred -----------------------------------------ccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHH
Confidence 000114689999999999988899999999999999999
Q ss_pred cc---cCCCCch---H---HHHHHHhhc----------------------CCCCcccc------cc-CchHHHHHHHcCC
Q 004998 305 FC---PFSTGEE---K---TRTMSSLRH----------------------RVLPPQLL------LK-FPKEASFCLWLLH 346 (720)
Q Consensus 305 lt---pf~~~~~---~---~~~~~~l~~----------------------~~~p~~~~------~~-~p~~~~li~~~L~ 346 (720)
++ ||.+... . ......+.. ...++... .. .....+||.+||+
T Consensus 281 ~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~ 360 (392)
T PHA03207 281 SVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLT 360 (392)
T ss_pred HHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhc
Confidence 98 6654321 0 011111100 00000000 01 1234489999999
Q ss_pred CCCCCCCChHHHHcCcccCCC
Q 004998 347 PEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 347 ~dP~~Rpta~eiL~hp~~~~~ 367 (720)
+||.+|||+.|+|.||||...
T Consensus 361 ~dp~~Rpsa~e~l~~p~f~~~ 381 (392)
T PHA03207 361 FDQEFRPSAQDILSLPLFTKE 381 (392)
T ss_pred cChhhCCCHHHHhhCchhhcc
Confidence 999999999999999999865
No 106
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=99.97 E-value=6.1e-31 Score=273.36 Aligned_cols=208 Identities=18% Similarity=0.200 Sum_probs=161.7
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
.++|..++.+++||||+++++ +++... .++++||| .|++|.+++.... .+++..++.++.||+.||.|||+.||
T Consensus 51 ~~~e~~~l~~l~~~~i~~~~~-~~~~~~---~~~~v~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lH~~~i 125 (263)
T cd06625 51 LECEIQLLKNLQHERIVQYYG-CLRDDE---TLSIFMEYMPGGSVKDQLKAYG-ALTETVTRKYTRQILEGVEYLHSNMI 125 (263)
T ss_pred HHHHHHHHHhCCCCCeeeeEE-EEccCC---eEEEEEEECCCCcHHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 346777999999999999999 554443 68999999 8999999995543 48999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.++|+|||.+......... ..
T Consensus 126 ~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~~-------------------------------~~------------ 162 (263)
T cd06625 126 VHRDIKGANILRDSAGNVKLGDFGASKRLQTICSS-------------------------------GT------------ 162 (263)
T ss_pred ecCCCCHHHEEEcCCCCEEEeecccceeccccccc-------------------------------cc------------
Confidence 99999999999999999999999887432110000 00
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......|+..|+|||++.+..++.++|||||||++|
T Consensus 163 --------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ 198 (263)
T cd06625 163 --------------------------------------------GMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVV 198 (263)
T ss_pred --------------------------------------------cccCCCcCccccCcceeccCCCCchhhhHHHHHHHH
Confidence 000135788999999999988999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004998 303 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
||++ ||............. .....+.+.... +...+|+.+||..+|.+|||+.++++||||
T Consensus 199 el~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 263 (263)
T cd06625 199 EMLTEKPPWAEFEAMAAIFKIA-TQPTNPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRHFFV 263 (263)
T ss_pred HHHhCCCCccccchHHHHHHHh-ccCCCCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhCCCC
Confidence 9999 565544433333322 222223333333 445599999999999999999999999997
No 107
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=99.97 E-value=4.5e-31 Score=277.94 Aligned_cols=207 Identities=17% Similarity=0.227 Sum_probs=156.2
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..+|..++++++||||+++++ ++.+.. .+|+++||.+++|.+++......+++..++.++.||+.||.|||++||+
T Consensus 46 ~~~ei~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~ 121 (284)
T cd07839 46 ALREICLLKELKHKNIVRLYD-VLHSDK---KLTLVFEYCDQDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVL 121 (284)
T ss_pred hhHHHHHHHhcCCCCeeeHHH-HhccCC---ceEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEe
Confidence 346778999999999999999 444433 6799999977799999865555699999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+||+++.++.++|+|||.+...+.... .
T Consensus 122 H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~--------------------------------~-------------- 155 (284)
T cd07839 122 HRDLKPQNLLINKNGELKLADFGLARAFGIPVR--------------------------------C-------------- 155 (284)
T ss_pred cCCCCHHHEEEcCCCcEEECccchhhccCCCCC--------------------------------C--------------
Confidence 999999999999999999999988743321100 0
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC-CCccccchhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLF 302 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGvll~ 302 (720)
.....+++.|+|||.+.+.. ++.++|||||||++|
T Consensus 156 --------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~ 191 (284)
T cd07839 156 --------------------------------------------YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFA 191 (284)
T ss_pred --------------------------------------------cCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHH
Confidence 00135688999999987755 799999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhc-------------------CCCCc---------cccccCchHHHHHHHcCCCCCCC
Q 004998 303 ELFC---PFSTGEEKTRTMSSLRH-------------------RVLPP---------QLLLKFPKEASFCLWLLHPEPSG 351 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~-------------------~~~p~---------~~~~~~p~~~~li~~~L~~dP~~ 351 (720)
||++ ||............+.. ...+. ......+...+|+.+||+.||.+
T Consensus 192 ~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~ 271 (284)
T cd07839 192 ELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQ 271 (284)
T ss_pred HHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhh
Confidence 9998 54333222222211110 00000 00112234459999999999999
Q ss_pred CCChHHHHcCccc
Q 004998 352 RPKMGELLQSEFL 364 (720)
Q Consensus 352 Rpta~eiL~hp~~ 364 (720)
|||+++++.||||
T Consensus 272 R~t~~~il~h~~f 284 (284)
T cd07839 272 RISAEEALQHPYF 284 (284)
T ss_pred cCCHHHHhcCCCC
Confidence 9999999999997
No 108
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=99.97 E-value=5.7e-31 Score=281.37 Aligned_cols=210 Identities=14% Similarity=0.197 Sum_probs=158.9
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..+|..++.+++||||+++++ ++..+. .+|+||||.+++|.+++...+..+++..++.++.||+.||.|||++||+
T Consensus 51 ~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~iv 126 (309)
T cd07872 51 AIREVSLLKDLKHANIVTLHD-IVHTDK---SLTLVFEYLDKDLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVL 126 (309)
T ss_pred HHHHHHHHHhCCCCCcceEEE-EEeeCC---eEEEEEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 336788999999999999999 554443 5799999966799999966555689999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.+||+|||++........
T Consensus 127 H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~----------------------------------------------- 159 (309)
T cd07872 127 HRDLKPQNLLINERGELKLADFGLARAKSVPTK----------------------------------------------- 159 (309)
T ss_pred cCCCCHHHEEECCCCCEEECccccceecCCCcc-----------------------------------------------
Confidence 999999999999999999999988733211100
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-CCCccccchhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLF 302 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGvll~ 302 (720)
......+|+.|+|||++.+. .++.++|||||||++|
T Consensus 160 -------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~ 196 (309)
T cd07872 160 -------------------------------------------TYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFF 196 (309)
T ss_pred -------------------------------------------ccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHH
Confidence 00013568999999998764 4899999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhc--C------------------CCCcc--------ccccCchHHHHHHHcCCCCCCC
Q 004998 303 ELFC---PFSTGEEKTRTMSSLRH--R------------------VLPPQ--------LLLKFPKEASFCLWLLHPEPSG 351 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~--~------------------~~p~~--------~~~~~p~~~~li~~~L~~dP~~ 351 (720)
||++ ||............+.. . ..+.. .....+...+|+.+||+.||.+
T Consensus 197 el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~ 276 (309)
T cd07872 197 EMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKK 276 (309)
T ss_pred HHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhh
Confidence 9999 56554332211111110 0 00100 0111234459999999999999
Q ss_pred CCChHHHHcCcccCCC
Q 004998 352 RPKMGELLQSEFLNEP 367 (720)
Q Consensus 352 Rpta~eiL~hp~~~~~ 367 (720)
|||+.|+|+||||+..
T Consensus 277 R~t~~e~l~h~~~~~~ 292 (309)
T cd07872 277 RISAEEAMKHAYFRSL 292 (309)
T ss_pred CCCHHHHhcChhhhhc
Confidence 9999999999999876
No 109
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.97 E-value=3.4e-31 Score=286.56 Aligned_cols=207 Identities=18% Similarity=0.202 Sum_probs=158.2
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHc-
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ- 140 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~- 140 (720)
+..+|..+|.+++||||+++++ ++.... .+|+|||| .|++|.+++...+ .+++..+..++.||+.||.|||+.
T Consensus 49 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~l~~~l~~lH~~~ 123 (333)
T cd06650 49 QIIRELQVLHECNSPYIVGFYG-AFYSDG---EISICMEHMDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYLREKH 123 (333)
T ss_pred HHHHHHHHHHHCCCCcccceeE-EEEECC---EEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhcC
Confidence 3447888999999999999999 554443 68999999 8999999996543 489999999999999999999985
Q ss_pred CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004998 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
+|+||||||+|||++.++.+||+|||++......
T Consensus 124 ~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~---------------------------------------------- 157 (333)
T cd06650 124 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---------------------------------------------- 157 (333)
T ss_pred CEEecCCChhhEEEcCCCCEEEeeCCcchhhhhh----------------------------------------------
Confidence 7999999999999999999999999877321000
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhh
Q 004998 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
......||+.|+|||++.+..++.++|||||||+
T Consensus 158 ----------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~i 191 (333)
T cd06650 158 ----------------------------------------------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLS 191 (333)
T ss_pred ----------------------------------------------ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHH
Confidence 0001367899999999998889999999999999
Q ss_pred hhhccc---cCCCCchHHHH--H-----------------------------------------HHhhcCCCCcccc-c-
Q 004998 301 LFELFC---PFSTGEEKTRT--M-----------------------------------------SSLRHRVLPPQLL-L- 332 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~--~-----------------------------------------~~l~~~~~p~~~~-~- 332 (720)
+|||++ ||......... + ..+... .++.+. .
T Consensus 192 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 270 (333)
T cd06650 192 LVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGRPLSSYGPDSRPPMAIFELLDYIVNE-PPPKLPSGV 270 (333)
T ss_pred HHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCccchhhhhcccccccccHHHHHHHHhcC-CCccCCCCC
Confidence 999998 56543221100 0 000000 111111 1
Q ss_pred cCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 333 KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 333 ~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
..+...+|+.+||++||++|||+.|++.||||+..
T Consensus 271 ~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~~~~ 305 (333)
T cd06650 271 FGAEFQDFVNKCLIKNPAERADLKQLMVHAFIKRS 305 (333)
T ss_pred cCHHHHHHHHHhccCCcccCcCHHHHhhCHHHhcC
Confidence 12334599999999999999999999999999865
No 110
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=99.97 E-value=3.4e-31 Score=285.15 Aligned_cols=205 Identities=17% Similarity=0.230 Sum_probs=158.0
Q ss_pred ehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 66 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.|..++..+ .||+|+++++ ++.... .+|+|||| .+++|.+++.... .+++.+++.++.||+.||.|||++||+
T Consensus 49 ~e~~~l~~~~~~~~i~~~~~-~~~~~~---~~~lv~E~~~~g~L~~~~~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~iv 123 (323)
T cd05616 49 VEKRVLALSGKPPFLTQLHS-CFQTMD---RLYFVMEYVNGGDLMYQIQQVG-RFKEPHAVFYAAEIAIGLFFLHSKGII 123 (323)
T ss_pred HHHHHHHhccCCCeEeeEEE-EEecCC---EEEEEEcCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCEE
Confidence 444555554 5889999988 555543 57999999 8999999995543 499999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.+||+|||++....... .
T Consensus 124 HrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~----------------------------------~------------- 156 (323)
T cd05616 124 YRDLKLDNVMLDSEGHIKIADFGMCKENMWDG----------------------------------V------------- 156 (323)
T ss_pred ecCCCHHHeEECCCCcEEEccCCCceecCCCC----------------------------------C-------------
Confidence 99999999999999999999998873211100 0
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......||+.|+|||++.+..++.++|||||||++||
T Consensus 157 -------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~e 193 (323)
T cd05616 157 -------------------------------------------TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYE 193 (323)
T ss_pred -------------------------------------------ccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHH
Confidence 0011468999999999999999999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCCh-----HHHHcCcccCCC
Q 004998 304 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM-----GELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta-----~eiL~hp~~~~~ 367 (720)
|++ ||...... .....+...... ......++..+|+.+||+.+|.+|+++ .++++||||...
T Consensus 194 lltg~~Pf~~~~~~-~~~~~i~~~~~~-~p~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~~~~~ 263 (323)
T cd05616 194 MLAGQAPFEGEDED-ELFQSIMEHNVA-YPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYI 263 (323)
T ss_pred HHhCCCCCCCCCHH-HHHHHHHhCCCC-CCCcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcCCCcCCC
Confidence 999 67655443 333333332211 111233455699999999999999974 899999999875
No 111
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.97 E-value=4.5e-32 Score=313.47 Aligned_cols=237 Identities=19% Similarity=0.204 Sum_probs=184.2
Q ss_pred CCCCCccccccccccCCCCccceee-eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCC
Q 004998 40 RNPRLLRGERFGVRGDDSNDFELRK-HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRS 117 (720)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~r~-~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~ 117 (720)
.+....+.+-|.+-... ...+.. .+|-.+|..++|||+|++||+- .+...++|.||| .||+|.+.+ ..++.
T Consensus 1258 ~tGellAvKEI~iq~~~--~k~~~~i~eEm~vlE~lnHpNlV~YyGVE----vHRekv~IFMEyC~~GsLa~ll-~~gri 1330 (1509)
T KOG4645|consen 1258 DTGELLAVKEIKIQDSD--HKTFKLIAEEMKVLEGLNHPNLVRYYGVE----VHREKVYIFMEYCEGGSLASLL-EHGRI 1330 (1509)
T ss_pred CccchhhhhhhhcCccc--cccCcchHHHHHHHHhccCccccccCcee----ecHHHHHHHHHHhccCcHHHHH-Hhcch
Confidence 34444444444332222 444433 3788899999999999999932 223357999999 999999988 44555
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchh
Q 004998 118 VDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLD 197 (720)
Q Consensus 118 l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (720)
.++...+.+..|++.||.|||++|||||||||+||+|+.+|-+|+.|||.|...-..
T Consensus 1331 ~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~----------------------- 1387 (1509)
T KOG4645|consen 1331 EDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNN----------------------- 1387 (1509)
T ss_pred hhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCCcEEeecccceeEecCc-----------------------
Confidence 888899999999999999999999999999999999999999999999988432111
Q ss_pred hHhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcc
Q 004998 198 MLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWY 277 (720)
Q Consensus 198 ~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y 277 (720)
.+++|..-...+||+.|
T Consensus 1388 ---------------------------------------------------------------~~~~~~el~~~~GT~~Y 1404 (1509)
T KOG4645|consen 1388 ---------------------------------------------------------------AQTMPGELQSMMGTPMY 1404 (1509)
T ss_pred ---------------------------------------------------------------hhcCCHHHHhhcCCchh
Confidence 01111111236899999
Q ss_pred cCCccccCCC---CCccccchhhhhhhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCC
Q 004998 278 ASPEELAGAP---VSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSG 351 (720)
Q Consensus 278 ~APE~l~~~~---~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~ 351 (720)
||||++.+.. ..-++|||||||++.||+| ||...+...++|..+..+..|+......+...+||..||..||+.
T Consensus 1405 MAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~~gh~Pq~P~~ls~~g~dFle~Cl~~dP~~ 1484 (1509)
T KOG4645|consen 1405 MAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVAAGHKPQIPERLSSEGRDFLEHCLEQDPKM 1484 (1509)
T ss_pred cCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHhccCCCCCchhhhHhHHHHHHHHHhcCchh
Confidence 9999997754 5779999999999999999 777777777888888877777766665566669999999999999
Q ss_pred CCChHHHHcCcccCCCcc
Q 004998 352 RPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 352 Rpta~eiL~hp~~~~~~~ 369 (720)
|.++.|||+|-|-+...+
T Consensus 1485 Rw~~~qlle~~f~~~~~d 1502 (1509)
T KOG4645|consen 1485 RWTASQLLEHAFGKSCTD 1502 (1509)
T ss_pred hhHHHHHHHhhccccccc
Confidence 999999999999776543
No 112
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=99.97 E-value=6.3e-31 Score=283.39 Aligned_cols=202 Identities=19% Similarity=0.219 Sum_probs=158.1
Q ss_pred hhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccC
Q 004998 69 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 147 (720)
Q Consensus 69 ~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDL 147 (720)
.++..++||||+++++ .+.... .+|++||| .|++|..++.+. ..+++..++.++.||+.||+|||++||+||||
T Consensus 48 ~~l~~~~hp~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~al~~lH~~givH~Dl 122 (325)
T cd05604 48 VLLKNVKHPFLVGLHY-SFQTTE---KLYFVLDFVNGGELFFHLQRE-RSFPEPRARFYAAEIASALGYLHSINIVYRDL 122 (325)
T ss_pred HHHHhCCCCCCccEEE-EEecCC---EEEEEEcCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCC
Confidence 3577899999999998 554443 57999999 899999998544 35999999999999999999999999999999
Q ss_pred CCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccccccc
Q 004998 148 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 227 (720)
Q Consensus 148 KP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q 227 (720)
||+|||++.++.+||+|||++...... .+
T Consensus 123 kp~NIll~~~~~~kL~DfG~~~~~~~~---------------------------------~~------------------ 151 (325)
T cd05604 123 KPENILLDSQGHVVLTDFGLCKEGIAQ---------------------------------SD------------------ 151 (325)
T ss_pred CHHHeEECCCCCEEEeecCCcccCCCC---------------------------------CC------------------
Confidence 999999999999999999987321000 00
Q ss_pred CCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhccc-
Q 004998 228 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 306 (720)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt- 306 (720)
......||+.|+|||++.+..++.++|||||||++|||++
T Consensus 152 ---------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G 192 (325)
T cd05604 152 ---------------------------------------TTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYG 192 (325)
T ss_pred ---------------------------------------CcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcC
Confidence 0011468999999999999889999999999999999999
Q ss_pred --cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCCh----HHHHcCcccCCC
Q 004998 307 --PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM----GELLQSEFLNEP 367 (720)
Q Consensus 307 --pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta----~eiL~hp~~~~~ 367 (720)
||...... .....+....+. ......+...+++.+||+.+|.+||++ .+++.||||...
T Consensus 193 ~~pf~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h~~f~~~ 257 (325)
T cd05604 193 LPPFYCRDVA-EMYDNILHKPLV-LRPGASLTAWSILEELLEKDRQRRLGAKEDFLEIQEHPFFESL 257 (325)
T ss_pred CCCCCCCCHH-HHHHHHHcCCcc-CCCCCCHHHHHHHHHHhccCHHhcCCCCCCHHHHhcCCCcCCC
Confidence 66654433 333333332211 111233445599999999999999976 589999999875
No 113
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=99.97 E-value=4.6e-31 Score=285.31 Aligned_cols=208 Identities=17% Similarity=0.242 Sum_probs=157.8
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|..++..++||||+++++ +++.+. .+|+|||| .|++|.+++.+....+++..++.++.||+.||+|||++||+|
T Consensus 50 ~e~~~l~~~~~~~i~~~~~-~~~~~~---~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH 125 (331)
T cd05597 50 EERDVLVNGDRRWITNLHY-AFQDEN---NLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVH 125 (331)
T ss_pred HHHHHHHhCCCCCCCceEE-EEecCC---eEEEEEecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEE
Confidence 4666788899999999999 555543 68999999 899999999665556999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+|||++.++.+||+|||++........
T Consensus 126 ~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~------------------------------------------------ 157 (331)
T cd05597 126 RDIKPDNVLLDKNGHIRLADFGSCLRLLADGT------------------------------------------------ 157 (331)
T ss_pred CCCCHHHEEECCCCCEEEEECCceeecCCCCC------------------------------------------------
Confidence 99999999999999999999998733211000
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-----CCCCccccchhhhh
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-----APVSCASDIYRLGV 299 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-----~~~s~~sDIwSLGv 299 (720)
......+||+.|+|||++.+ ..++.++|||||||
T Consensus 158 -----------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~ 196 (331)
T cd05597 158 -----------------------------------------VQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGV 196 (331)
T ss_pred -----------------------------------------ccccceeccccccCHHHHhhccccccCCCCcceeehhhh
Confidence 00011368999999999963 34788999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhc----CCCCccccccCchHHHHHHHcCCCCCCC--CCChHHHHcCcccCCC
Q 004998 300 LLFELFC---PFSTGEEKTRTMSSLRH----RVLPPQLLLKFPKEASFCLWLLHPEPSG--RPKMGELLQSEFLNEP 367 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~----~~~p~~~~~~~p~~~~li~~~L~~dP~~--Rpta~eiL~hp~~~~~ 367 (720)
++|||++ ||....... .+..+.. ..+++......+...+|+.+||..++.. |+++.++++||||...
T Consensus 197 ~l~el~~g~~Pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~hp~~~~~ 272 (331)
T cd05597 197 CMYEMLYGETPFYAESLVE-TYGKIMNHKEHFQFPPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDHPFFEGI 272 (331)
T ss_pred HHHHHhhCCCCCCCCCHHH-HHHHHHcCCCcccCCCccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCCCCCCC
Confidence 9999999 665543332 2222222 1223322223344559999988664443 7899999999999875
No 114
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=99.97 E-value=4.8e-31 Score=278.72 Aligned_cols=206 Identities=16% Similarity=0.216 Sum_probs=160.7
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
.+|..++.+++||||+++++ .+..+. .+|++||| .+++|.+++.. ....+++..+..++.||+.||.|||+.||
T Consensus 48 ~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i 123 (285)
T cd05605 48 LNEKQILEKVNSRFVVSLAY-AYETKD---ALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERI 123 (285)
T ss_pred HHHHHHHHhcCCCCEeeeee-eecCCC---eEEEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 36778999999999999999 454443 68999999 89999998843 33458999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.++|+|||.+.......
T Consensus 124 vH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~----------------------------------------------- 156 (285)
T cd05605 124 VYRDLKPENILLDDYGHIRISDLGLAVEIPEGE----------------------------------------------- 156 (285)
T ss_pred EecCCCHHHEEECCCCCEEEeeCCCceecCCCC-----------------------------------------------
Confidence 999999999999999999999988763210000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......|++.|+|||++.+..++.++||||+||++|
T Consensus 157 --------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~ 192 (285)
T cd05605 157 --------------------------------------------TIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIY 192 (285)
T ss_pred --------------------------------------------ccccccCCCCccCcHHhcCCCCCccccchhHHHHHH
Confidence 000136799999999999888999999999999999
Q ss_pred hccc---cCCCCchHH---HHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCC
Q 004998 303 ELFC---PFSTGEEKT---RTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 367 (720)
Q Consensus 303 eLlt---pf~~~~~~~---~~~~~l~~~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~ 367 (720)
||++ ||....... .....+... ++.+.... +...+|+.+||+.||.+|| +++++++||||...
T Consensus 193 el~~g~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~ 267 (285)
T cd05605 193 EMIEGKSPFRQRKEKVKREEVERRVKED--QEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFFRTA 267 (285)
T ss_pred HHHHCCCCCCCCchhhHHHHHHHHhhhc--ccccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcCcCccCC
Confidence 9998 666543221 122222211 12222223 3445999999999999999 89999999999875
No 115
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=99.97 E-value=4.5e-31 Score=284.34 Aligned_cols=205 Identities=17% Similarity=0.237 Sum_probs=158.6
Q ss_pred eehhhhcccCCCCC-ceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 65 HSDGVELTHGDHLR-NQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 65 ~~e~~~Ls~l~Hpn-IV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..|..++..+.|++ |+++++ ++.... .+|+|||| .|++|.+++.... .+++..++.++.||+.||.|||++||
T Consensus 48 ~~e~~~l~~~~~~~~i~~~~~-~~~~~~---~~~lv~E~~~~g~L~~~~~~~~-~~~~~~~~~~~~qi~~al~~lH~~~i 122 (324)
T cd05587 48 MVEKRVLALPGKPPFLTQLHS-CFQTMD---RLYFVMEYVNGGDLMYHIQQVG-KFKEPHAVFYAAEIAIGLFFLHSKGI 122 (324)
T ss_pred HHHHHHHHhcCCCCceeeeEE-EEEcCC---EEEEEEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 35666788887765 777777 554443 58999999 8999999995544 48999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.++|+|||++.......
T Consensus 123 vH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~----------------------------------------------- 155 (324)
T cd05587 123 IYRDLKLDNVMLDAEGHIKIADFGMCKENIFGG----------------------------------------------- 155 (324)
T ss_pred EecCCCHHHeEEcCCCCEEEeecCcceecCCCC-----------------------------------------------
Confidence 999999999999999999999999873210000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
.......||+.|+|||++.+..++.++|||||||++|
T Consensus 156 -------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ 192 (324)
T cd05587 156 -------------------------------------------KTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLY 192 (324)
T ss_pred -------------------------------------------CceeeecCCccccChhhhcCCCCCcccchhhhHHHHH
Confidence 0001146899999999999988999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCCCCcccccc-CchHHHHHHHcCCCCCCCCCCh-----HHHHcCcccCCC
Q 004998 303 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLK-FPKEASFCLWLLHPEPSGRPKM-----GELLQSEFLNEP 367 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~-~p~~~~li~~~L~~dP~~Rpta-----~eiL~hp~~~~~ 367 (720)
||++ ||...... .....+..... .++.. .+...+|+.+||++||.+|+++ .++++||||...
T Consensus 193 elltG~~pf~~~~~~-~~~~~i~~~~~--~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~hp~~~~~ 263 (324)
T cd05587 193 EMLAGQPPFDGEDED-ELFQSIMEHNV--SYPKSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREHAFFRRI 263 (324)
T ss_pred HHHhCCCCCCCCCHH-HHHHHHHcCCC--CCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence 9999 67655443 33333333221 12222 3445599999999999999976 899999999875
No 116
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=99.97 E-value=3.6e-31 Score=285.58 Aligned_cols=206 Identities=16% Similarity=0.249 Sum_probs=158.2
Q ss_pred ehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 66 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.|..++.++ +||||+++++ ++.... .+|+|||| .|++|.+++.... .+++..++.++.||+.||.|||++||+
T Consensus 44 ~e~~~~~~~~~~~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~-~l~~~~~~~~~~qi~~al~~lH~~~iv 118 (327)
T cd05617 44 TEKHVFEQASSNPFLVGLHS-CFQTTS---RLFLVIEYVNGGDLMFHMQRQR-KLPEEHARFYAAEICIALNFLHERGII 118 (327)
T ss_pred HHHHHHHhhcCCCCEeeEEE-EEEeCC---EEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 555566666 6999999999 555543 68999999 8999999885443 499999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.+||+|||++....... +
T Consensus 119 HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~---------------------------------~-------------- 151 (327)
T cd05617 119 YRDLKLDNVLLDADGHIKLTDYGMCKEGLGPG---------------------------------D-------------- 151 (327)
T ss_pred ccCCCHHHEEEeCCCCEEEeccccceeccCCC---------------------------------C--------------
Confidence 99999999999999999999998873210000 0
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
.....+||+.|+|||++.+..++.++|||||||++||
T Consensus 152 -------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~e 188 (327)
T cd05617 152 -------------------------------------------TTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFE 188 (327)
T ss_pred -------------------------------------------ceecccCCcccCCHHHHCCCCCCchheeehhHHHHHH
Confidence 0011468999999999999889999999999999999
Q ss_pred ccc---cCCCC------chHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCC------hHHHHcCcccCCC
Q 004998 304 LFC---PFSTG------EEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPK------MGELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~------~~~~~~~~~l~~~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rpt------a~eiL~hp~~~~~ 367 (720)
|++ ||... .........+.... ..++... +...+++.+||.+||.+|++ +.++++||||...
T Consensus 189 ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~--~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~~f~~~ 266 (327)
T cd05617 189 MMAGRSPFDIITDNPDMNTEDYLFQVILEKP--IRIPRFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSHTFFRSI 266 (327)
T ss_pred HHhCCCCCCccCCCcccccHHHHHHHHHhCC--CCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcCCCCCCC
Confidence 999 66421 11122233332221 1122223 44559999999999999997 4699999999986
Q ss_pred c
Q 004998 368 R 368 (720)
Q Consensus 368 ~ 368 (720)
.
T Consensus 267 ~ 267 (327)
T cd05617 267 D 267 (327)
T ss_pred C
Confidence 3
No 117
>PTZ00284 protein kinase; Provisional
Probab=99.97 E-value=4.8e-31 Score=298.55 Aligned_cols=220 Identities=15% Similarity=0.181 Sum_probs=148.2
Q ss_pred hhhhcccCC------CCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH-
Q 004998 67 DGVELTHGD------HLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS- 139 (720)
Q Consensus 67 e~~~Ls~l~------HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs- 139 (720)
|..++..+. |++|+.+++ ++..+. .++|+|||+.|++|.+++.+.+ .+++..++.|+.||+.||+|||+
T Consensus 175 e~~~l~~l~~~~~~~~~~i~~i~~-~~~~~~--~~~~iv~~~~g~~l~~~l~~~~-~l~~~~~~~i~~qi~~aL~yLH~~ 250 (467)
T PTZ00284 175 EIQFMEKVRQADPADRFPLMKIQR-YFQNET--GHMCIVMPKYGPCLLDWIMKHG-PFSHRHLAQIIFQTGVALDYFHTE 250 (467)
T ss_pred HHHHHHHHhhcCcccCcceeeeEE-EEEcCC--ceEEEEEeccCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhc
Confidence 444554444 455888888 444332 3689999998999999995543 59999999999999999999998
Q ss_pred cCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004998 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
.|||||||||+|||++.++... ++...... ......++++|||.+.....
T Consensus 251 ~gIiHrDlKP~NILl~~~~~~~--~~~~~~~~---------------------------~~~~~~vkl~DfG~~~~~~~- 300 (467)
T PTZ00284 251 LHLMHTDLKPENILMETSDTVV--DPVTNRAL---------------------------PPDPCRVRICDLGGCCDERH- 300 (467)
T ss_pred CCeecCCCCHHHEEEecCCccc--cccccccc---------------------------CCCCceEEECCCCccccCcc-
Confidence 5999999999999998765311 11100000 00001234455554321000
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhh
Q 004998 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
.....+||+.|+|||++.+..|+.++|||||||
T Consensus 301 -----------------------------------------------~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGv 333 (467)
T PTZ00284 301 -----------------------------------------------SRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGC 333 (467)
T ss_pred -----------------------------------------------ccccccCCccccCcHHhhcCCCCcHHHHHHHHH
Confidence 001257899999999999999999999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhc--CCCCcccc---------------------------------------ccCc
Q 004998 300 LLFELFC---PFSTGEEKTRTMSSLRH--RVLPPQLL---------------------------------------LKFP 335 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~--~~~p~~~~---------------------------------------~~~p 335 (720)
++|||++ ||......... ..+.. +.+|..+. ...+
T Consensus 334 il~elltG~~pf~~~~~~~~~-~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (467)
T PTZ00284 334 IIYELYTGKLLYDTHDNLEHL-HLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDD 412 (467)
T ss_pred HHHHHHhCCCCCCCCChHHHH-HHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchH
Confidence 9999999 66554332111 11100 11111100 0112
Q ss_pred hHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004998 336 KEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 336 ~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
...+||.+||++||.+|||++|+|+||||....
T Consensus 413 ~~~dli~~mL~~dP~~R~ta~e~L~Hp~~~~~~ 445 (467)
T PTZ00284 413 LLCDLIYGLLHYDRQKRLNARQMTTHPYVLKYY 445 (467)
T ss_pred HHHHHHHHhCCcChhhCCCHHHHhcCccccccC
Confidence 345999999999999999999999999998753
No 118
>PHA03211 serine/threonine kinase US3; Provisional
Probab=99.97 E-value=6.4e-31 Score=294.99 Aligned_cols=209 Identities=15% Similarity=0.172 Sum_probs=157.1
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCceec
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 145 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHr 145 (720)
+|..+|++++|||||++++ ++..+. ..+++||+..++|.+++......+++..++.|+.||+.||.|||++|||||
T Consensus 209 ~E~~iL~~L~HpnIv~l~~-~~~~~~---~~~lv~e~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHr 284 (461)
T PHA03211 209 HEARLLRRLSHPAVLALLD-VRVVGG---LTCLVLPKYRSDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHR 284 (461)
T ss_pred HHHHHHHHCCCCCCCcEEE-EEEECC---EEEEEEEccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEC
Confidence 6888999999999999999 444432 578999997789999996655569999999999999999999999999999
Q ss_pred cCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccccc
Q 004998 146 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 225 (720)
Q Consensus 146 DLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~ 225 (720)
||||+||||+.++.++|+|||+++....... ..
T Consensus 285 DLKP~NILl~~~~~vkL~DFGla~~~~~~~~-------------------------------~~---------------- 317 (461)
T PHA03211 285 DIKTENVLVNGPEDICLGDFGAACFARGSWS-------------------------------TP---------------- 317 (461)
T ss_pred cCCHHHEEECCCCCEEEcccCCceecccccc-------------------------------cc----------------
Confidence 9999999999999999999988743210000 00
Q ss_pred ccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhcc
Q 004998 226 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 305 (720)
Q Consensus 226 ~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLl 305 (720)
......||+.|+|||++.+..++.++|||||||+||||+
T Consensus 318 -----------------------------------------~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~ 356 (461)
T PHA03211 318 -----------------------------------------FHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAA 356 (461)
T ss_pred -----------------------------------------cccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHH
Confidence 000146899999999999988999999999999999998
Q ss_pred c---cCCCCc-------hHHHHHHHhhcCC-----CCcc---------------------c-------cccCchHHHHHH
Q 004998 306 C---PFSTGE-------EKTRTMSSLRHRV-----LPPQ---------------------L-------LLKFPKEASFCL 342 (720)
Q Consensus 306 t---pf~~~~-------~~~~~~~~l~~~~-----~p~~---------------------~-------~~~~p~~~~li~ 342 (720)
+ ++.... ........+.... +++. . ....+...+||.
T Consensus 357 ~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~ 436 (461)
T PHA03211 357 VHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVC 436 (461)
T ss_pred HcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHH
Confidence 6 222110 0111222222111 1110 0 011124558999
Q ss_pred HcCCCCCCCCCChHHHHcCcccCC
Q 004998 343 WLLHPEPSGRPKMGELLQSEFLNE 366 (720)
Q Consensus 343 ~~L~~dP~~Rpta~eiL~hp~~~~ 366 (720)
+||..||.+|||+.|+|+||||+.
T Consensus 437 ~mL~~DP~~RPsa~elL~hp~f~~ 460 (461)
T PHA03211 437 RALTFDGARRPSAAELLRLPLFQS 460 (461)
T ss_pred HHcccChhhCcCHHHHhhCcccCC
Confidence 999999999999999999999975
No 119
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=99.97 E-value=1.2e-30 Score=281.25 Aligned_cols=201 Identities=18% Similarity=0.233 Sum_probs=157.5
Q ss_pred hhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccC
Q 004998 69 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 147 (720)
Q Consensus 69 ~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDL 147 (720)
.++..++||||+++++ ++.... .+|++||| .|++|.+++.... .+++..++.++.||+.||.|||++||+||||
T Consensus 48 ~~l~~~~h~~Iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~L~~lH~~giiHrDl 122 (325)
T cd05602 48 VLLKNVKHPFLVGLHF-SFQTAD---KLYFVLDYINGGELFYHLQRER-CFLEPRARFYAAEIASALGYLHSLNIVYRDL 122 (325)
T ss_pred HHHHhCCCCCCCceeE-EEEcCC---eEEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeEecCC
Confidence 3567899999999999 554443 57999999 8999999995543 4899999999999999999999999999999
Q ss_pred CCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccccccc
Q 004998 148 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 227 (720)
Q Consensus 148 KP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q 227 (720)
||+|||++.++.++|+|||++....... .
T Consensus 123 kp~Nili~~~~~~kl~DfG~a~~~~~~~---------------------------------~------------------ 151 (325)
T cd05602 123 KPENILLDSQGHIVLTDFGLCKENIEHN---------------------------------G------------------ 151 (325)
T ss_pred CHHHeEECCCCCEEEccCCCCcccccCC---------------------------------C------------------
Confidence 9999999999999999998873210000 0
Q ss_pred CCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhccc-
Q 004998 228 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 306 (720)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt- 306 (720)
.....+||+.|+|||++.+..++.++|||||||++|||++
T Consensus 152 ---------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g 192 (325)
T cd05602 152 ---------------------------------------TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYG 192 (325)
T ss_pred ---------------------------------------CcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcC
Confidence 0011468999999999999889999999999999999999
Q ss_pred --cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChH----HHHcCcccCCC
Q 004998 307 --PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMG----ELLQSEFLNEP 367 (720)
Q Consensus 307 --pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rpta~----eiL~hp~~~~~ 367 (720)
||...... ..+..+..... .+.... +...+|+.+||+.||.+||++. ++++|+||...
T Consensus 193 ~~pf~~~~~~-~~~~~i~~~~~--~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~i~~~~~~~~~ 257 (325)
T cd05602 193 LPPFYSRNTA-EMYDNILNKPL--QLKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKNHIFFSPI 257 (325)
T ss_pred CCCCCCCCHH-HHHHHHHhCCc--CCCCCCCHHHHHHHHHHcccCHHHCCCCCCCHHHHhcCcccCCC
Confidence 66654443 33334333221 122233 3445999999999999999876 89999999764
No 120
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=99.97 E-value=1.4e-30 Score=280.04 Aligned_cols=202 Identities=18% Similarity=0.225 Sum_probs=157.5
Q ss_pred hhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccC
Q 004998 69 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 147 (720)
Q Consensus 69 ~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDL 147 (720)
.++..++||||+++++ .+.+.. .+|+|||| .|++|..++.+. ..+++..+..++.||+.||.|||++||+||||
T Consensus 48 ~~l~~~~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dl 122 (321)
T cd05603 48 VLLKNLKHPFLVGLHY-SFQTAE---KLYFVLDYVNGGELFFHLQRE-RCFLEPRARFYAAEVASAIGYLHSLNIIYRDL 122 (321)
T ss_pred HHHHhCCCCCccceee-EEEcCC---EEEEEEcCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccC
Confidence 3578899999999998 554443 57999999 899999988544 34899999999999999999999999999999
Q ss_pred CCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccccccc
Q 004998 148 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 227 (720)
Q Consensus 148 KP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q 227 (720)
||+||+++.++.+||+|||++.......
T Consensus 123 kp~NIll~~~~~~kl~Dfg~~~~~~~~~---------------------------------------------------- 150 (321)
T cd05603 123 KPENILLDSQGHVVLTDFGLCKEGVEPE---------------------------------------------------- 150 (321)
T ss_pred CHHHeEECCCCCEEEccCCCCccCCCCC----------------------------------------------------
Confidence 9999999999999999998873210000
Q ss_pred CCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhccc-
Q 004998 228 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 306 (720)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt- 306 (720)
......+||+.|+|||++.+..++.++|||||||++|||++
T Consensus 151 --------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g 192 (321)
T cd05603 151 --------------------------------------ETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYG 192 (321)
T ss_pred --------------------------------------CccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcC
Confidence 00011468999999999998889999999999999999999
Q ss_pred --cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCCh----HHHHcCcccCCC
Q 004998 307 --PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM----GELLQSEFLNEP 367 (720)
Q Consensus 307 --pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta----~eiL~hp~~~~~ 367 (720)
||...+.. .....+...... ..........+++.+||+.||.+||++ .++++|+||...
T Consensus 193 ~~pf~~~~~~-~~~~~i~~~~~~-~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~~~~~~~ 257 (321)
T cd05603 193 LPPFYSRDVS-QMYDNILHKPLQ-LPGGKTVAACDLLVGLLHKDQRRRLGAKADFLEIKNHVFFSPI 257 (321)
T ss_pred CCCCCCCCHH-HHHHHHhcCCCC-CCCCCCHHHHHHHHHHccCCHhhcCCCCCCHHHHhCCCCcCCC
Confidence 66554433 333444333211 111233455699999999999999875 599999999865
No 121
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=99.97 E-value=6.1e-31 Score=286.80 Aligned_cols=206 Identities=21% Similarity=0.216 Sum_probs=155.6
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..+|..++||||+++++ ++.... .+|++||| .+++|.+.. ..++..+..++.||+.||.|||++||+
T Consensus 120 ~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~~iv 190 (353)
T PLN00034 120 CREIEILRDVNHPNVVKCHD-MFDHNG---EIQVLLEFMDGGSLEGTH-----IADEQFLADVARQILSGIAYLHRRHIV 190 (353)
T ss_pred HHHHHHHHhCCCCCcceeee-EeccCC---eEEEEEecCCCCcccccc-----cCCHHHHHHHHHHHHHHHHHHHHCCEe
Confidence 37888999999999999999 554443 57999999 888886532 257888899999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.+||+|||++....... +
T Consensus 191 HrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~---------------------------------~-------------- 223 (353)
T PLN00034 191 HRDIKPSNLLINSAKNVKIADFGVSRILAQTM---------------------------------D-------------- 223 (353)
T ss_pred ecCCCHHHEEEcCCCCEEEcccccceeccccc---------------------------------c--------------
Confidence 99999999999999999999998874321100 0
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-----CCCCccccchhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-----APVSCASDIYRLG 298 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-----~~~s~~sDIwSLG 298 (720)
.....+||..|+|||++.. ...+.++||||||
T Consensus 224 -------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslG 260 (353)
T PLN00034 224 -------------------------------------------PCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLG 260 (353)
T ss_pred -------------------------------------------cccccccCccccCccccccccccCcCCCcchhHHHHH
Confidence 0001368999999999843 2246799999999
Q ss_pred hhhhhccc---cCCCC--chHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004998 299 VLLFELFC---PFSTG--EEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 299 vll~eLlt---pf~~~--~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
|++|||++ ||... ......+..+.....+.......+...+||.+||+.||++|||+.|+|+||||.....
T Consensus 261 vil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~hp~~~~~~~ 336 (353)
T PLN00034 261 VSILEFYLGRFPFGVGRQGDWASLMCAICMSQPPEAPATASREFRHFISCCLQREPAKRWSAMQLLQHPFILRAQP 336 (353)
T ss_pred HHHHHHHhCCCCCCCCCCccHHHHHHHHhccCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcCcccccCCc
Confidence 99999999 66532 2222333333322222222233345569999999999999999999999999998743
No 122
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=99.97 E-value=1.7e-31 Score=268.08 Aligned_cols=216 Identities=18% Similarity=0.213 Sum_probs=162.1
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHh----CCCCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLD----KPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~----~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
.||..++..+.|||||.|..++...+. .+++++||...+|.+.|+ ...+.++...++.|+.||++||.|||++
T Consensus 75 cREiaL~REl~h~nvi~Lv~Vfl~~d~---~v~l~fdYAEhDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~N 151 (438)
T KOG0666|consen 75 CREIALLRELKHPNVISLVKVFLSHDK---KVWLLFDYAEHDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSN 151 (438)
T ss_pred HHHHHHHHHhcCCcchhHHHHHhccCc---eEEEEehhhhhhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhh
Confidence 378889999999999999995555332 589999998899999993 2335689999999999999999999999
Q ss_pred CceeccCCCCcEEEccC----CceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCC
Q 004998 141 GIVVHNVRPSCFVMSSF----NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 216 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~----~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~ 216 (720)
=|+||||||.|||+..+ |.|||.|||+++.+..+-.. |
T Consensus 152 WvlHRDLKPaNIlvmgdgperG~VKIaDlGlaR~~~~plkp--------------------------------l------ 193 (438)
T KOG0666|consen 152 WVLHRDLKPANILVMGDGPERGRVKIADLGLARLFNNPLKP--------------------------------L------ 193 (438)
T ss_pred heeeccCCcceEEEeccCCccCeeEeecccHHHHhhccccc--------------------------------c------
Confidence 99999999999999977 88999888887665333100 0
Q ss_pred CCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC-CCccccch
Q 004998 217 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIY 295 (720)
Q Consensus 217 ~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIw 295 (720)
. .....+-|.||+|||++.|.. ||++.|||
T Consensus 194 -------~------------------------------------------s~d~VVVTiWYRAPELLLGa~hYT~AiDvW 224 (438)
T KOG0666|consen 194 -------A------------------------------------------SLDPVVVTIWYRAPELLLGARHYTKAIDVW 224 (438)
T ss_pred -------c------------------------------------------cCCceEEEEEecChHHhcccccccchhhhH
Confidence 0 001256799999999999987 99999999
Q ss_pred hhhhhhhhccc--cC-CCCch------------HHHHHHHhhc------------------------CCCCcc-c-----
Q 004998 296 RLGVLLFELFC--PF-STGEE------------KTRTMSSLRH------------------------RVLPPQ-L----- 330 (720)
Q Consensus 296 SLGvll~eLlt--pf-~~~~~------------~~~~~~~l~~------------------------~~~p~~-~----- 330 (720)
++|||+.||++ |. .+.++ ..+++..+.. ....+. +
T Consensus 225 AiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~ 304 (438)
T KOG0666|consen 225 AIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYH 304 (438)
T ss_pred HHHHHHHHHHccCccccchhhhcccCCCchHHHHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHH
Confidence 99999999999 52 22111 1112222211 100110 0
Q ss_pred --cccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCccc
Q 004998 331 --LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 331 --~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
....|...+|+.+||.+||-+|.|++++|+|+||.+...+
T Consensus 305 ~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~yF~~d~lp 346 (438)
T KOG0666|consen 305 KHKVKDPSALDLLQKLLTYDPIKRITAEQALEHPYFTEDPLP 346 (438)
T ss_pred HhcCCCchHHHHHHHHhccCchhhccHHHHhcccccccCCCC
Confidence 0022334599999999999999999999999999987443
No 123
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=99.97 E-value=1.5e-30 Score=280.60 Aligned_cols=214 Identities=18% Similarity=0.157 Sum_probs=156.1
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
+|..+++.++|||||++++ ++..+. .+|+|||| .+++|.+++... ...+++..++.++.||+.||+|||++||+
T Consensus 48 ~e~~~l~~l~hpniv~~~~-~~~~~~---~~~lv~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ii 123 (327)
T cd08227 48 GELHVSKLFNHPNIVPYRA-TFIADN---ELWVVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYV 123 (327)
T ss_pred HHHHHHHhcCCCCeeeEEE-EEEECC---EEEEEEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEe
Confidence 5777899999999999999 554443 57999999 899999999542 34589999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.+++.||+.+... .++|.....
T Consensus 124 H~dlkp~Nil~~~~~~~~l~~~~~~~~~------------------------------------~~~~~~~~~------- 160 (327)
T cd08227 124 HRSVKASHILISVDGKVYLSGLRSNLSM------------------------------------INHGQRLRV------- 160 (327)
T ss_pred cCCCChhhEEEecCCcEEEcccchhhcc------------------------------------ccccccccc-------
Confidence 9999999999999999999988765221 111100000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC--CCCccccchhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA--PVSCASDIYRLGVLL 301 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~--~~s~~sDIwSLGvll 301 (720)
..+ ++ ....++..|+|||++.+. .++.++|||||||++
T Consensus 161 -----------------------~~~--------------~~---~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il 200 (327)
T cd08227 161 -----------------------VHD--------------FP---KYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITA 200 (327)
T ss_pred -----------------------ccc--------------cc---ccccceecccChHHhhcccCCCCchhhHHHHHHHH
Confidence 000 00 012467789999999763 489999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCC---------c------------------------------------ccccc
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRHRVLP---------P------------------------------------QLLLK 333 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p---------~------------------------------------~~~~~ 333 (720)
|||++ ||............+.. ..+ + .....
T Consensus 201 ~el~~g~~pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (327)
T cd08227 201 CELANGHVPFKDMPATQMLLEKLNG-TVPCLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTF 279 (327)
T ss_pred HHHHHCCCCCCCcchhHHHHHHhcC-CccccccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCccccccccc
Confidence 99999 66543322222222111 000 0 00001
Q ss_pred CchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 334 FPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 334 ~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
.+...+|+.+||++||++|||+.|+++||||+..
T Consensus 280 ~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f~~~ 313 (327)
T cd08227 280 SPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQI 313 (327)
T ss_pred CHHHHHHHHHHHhhCchhcCCHHHHhcChhhhhc
Confidence 2345599999999999999999999999999875
No 124
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=99.97 E-value=6.7e-31 Score=309.20 Aligned_cols=226 Identities=16% Similarity=0.166 Sum_probs=157.8
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC---CCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~---~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
...|+.+|.+++|||||++++.++.... ..+|+|||| .+++|.++|.. ....+++..++.|+.||+.||.|||+
T Consensus 59 ~~~EI~IL~~L~HPNIVrl~d~f~de~~--~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs 136 (1021)
T PTZ00266 59 LVIEVNVMRELKHKNIVRYIDRFLNKAN--QKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHN 136 (1021)
T ss_pred HHHHHHHHHHcCCCCcCeEEEEEEecCC--CEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 3468889999999999999994443322 368999999 89999999943 23459999999999999999999998
Q ss_pred c-------CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccccccccc
Q 004998 140 Q-------GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQL 212 (720)
Q Consensus 140 ~-------gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgl 212 (720)
. +||||||||+||||+.... .+.+..... .....+..++|+|||+
T Consensus 137 ~g~~~~~k~IVHRDLKPeNILL~s~~~-~lg~i~~~~---------------------------~n~ng~~iVKLsDFGl 188 (1021)
T PTZ00266 137 LKDGPNGERVLHRDLKPQNIFLSTGIR-HIGKITAQA---------------------------NNLNGRPIAKIGDFGL 188 (1021)
T ss_pred cccccccCCceeccCcHHHeEeecCcc-ccccccccc---------------------------cccCCCCceEEccCCc
Confidence 4 4999999999999975321 000000000 0000011234455555
Q ss_pred ccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC--CCCc
Q 004998 213 VTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA--PVSC 290 (720)
Q Consensus 213 a~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~--~~s~ 290 (720)
+....... .....+||+.|+|||++.+. .++.
T Consensus 189 Ar~l~~~s----------------------------------------------~~~s~vGTp~YmAPEvL~ge~~~~s~ 222 (1021)
T PTZ00266 189 SKNIGIES----------------------------------------------MAHSCVGTPYYWSPELLLHETKSYDD 222 (1021)
T ss_pred cccccccc----------------------------------------------cccccCCCccccCHHHHhccCCCCCc
Confidence 44221100 00114689999999999653 4899
Q ss_pred cccchhhhhhhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCC
Q 004998 291 ASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 366 (720)
Q Consensus 291 ~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~ 366 (720)
++||||||||||||++ ||.........+..+..... ..+....+...+||..||.++|.+||++.|+|+||||..
T Consensus 223 KSDVWSLG~ILYELLTGk~PF~~~~~~~qli~~lk~~p~-lpi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik~ 300 (1021)
T PTZ00266 223 KSDMWALGCIIYELCSGKTPFHKANNFSQLISELKRGPD-LPIKGKSKELNILIKNLLNLSAKERPSALQCLGYQIIKN 300 (1021)
T ss_pred hhHHHHHHHHHHHHHHCCCCCCcCCcHHHHHHHHhcCCC-CCcCCCCHHHHHHHHHHhcCChhHCcCHHHHhccHHHhh
Confidence 9999999999999999 77655554444444443321 112223455669999999999999999999999999963
No 125
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=99.97 E-value=1.9e-30 Score=285.01 Aligned_cols=206 Identities=16% Similarity=0.209 Sum_probs=156.8
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|..++..++||||+++++ .+.++. .+|+|||| .|++|.+++... .+++..++.++.||+.||.|||++||+|
T Consensus 92 ~e~~i~~~~~hp~iv~~~~-~~~~~~---~~~lv~Ey~~gg~L~~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivH 165 (371)
T cd05622 92 EERDIMAFANSPWVVQLFY-AFQDDR---YLYMVMEYMPGGDLVNLMSNY--DVPEKWARFYTAEVVLALDAIHSMGFIH 165 (371)
T ss_pred HHHHHHHhCCCCCCCeEEE-EEEcCC---EEEEEEcCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCCEEe
Confidence 5667888999999999999 554443 68999999 899999998543 3899999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+|||++.++++||+|||++........
T Consensus 166 rDLkp~NIll~~~~~ikL~DfG~a~~~~~~~~------------------------------------------------ 197 (371)
T cd05622 166 RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGM------------------------------------------------ 197 (371)
T ss_pred CCCCHHHEEECCCCCEEEEeCCceeEcCcCCc------------------------------------------------
Confidence 99999999999999999999998743211000
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC----CCccccchhhhhh
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP----VSCASDIYRLGVL 300 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~----~s~~sDIwSLGvl 300 (720)
......+||+.|+|||++.+.. ++.++|||||||+
T Consensus 198 -----------------------------------------~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvi 236 (371)
T cd05622 198 -----------------------------------------VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVF 236 (371)
T ss_pred -----------------------------------------ccccCcccCccccCHHHHhccCCCccCCCccceeehhHH
Confidence 0001146899999999997543 7899999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCC--CC-ccccccCchHHHHHHHcCCCCCCC--CCChHHHHcCcccCCC
Q 004998 301 LFELFC---PFSTGEEKTRTMSSLRHRV--LP-PQLLLKFPKEASFCLWLLHPEPSG--RPKMGELLQSEFLNEP 367 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~--~p-~~~~~~~p~~~~li~~~L~~dP~~--Rpta~eiL~hp~~~~~ 367 (720)
+|||++ ||...... .....+.... ++ +......+...+||.+||..+|.+ |+++.++++||||...
T Consensus 237 lyell~G~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~~~~~~ 310 (371)
T cd05622 237 LYEMLVGDTPFYADSLV-GTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKND 310 (371)
T ss_pred HHHHHhCCCCCCCCCHH-HHHHHHHcCCCcccCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCcccCCC
Confidence 999999 67655443 3334443322 11 111123344459999999844433 7899999999999874
No 126
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=99.97 E-value=3.7e-30 Score=271.01 Aligned_cols=209 Identities=14% Similarity=0.156 Sum_probs=160.2
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..++..++||||+++++ .+.... ..|++||| .+++|..++.+...++++..++.++.||+.||.|||+.||+
T Consensus 50 ~~e~~~l~~l~h~~ii~~~~-~~~~~~---~~~~v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~ 125 (282)
T cd06643 50 MVEIDILASCDHPNIVKLLD-AFYYEN---NLWILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKII 125 (282)
T ss_pred HHHHHHHHHCCCCCeeeEEE-EEeeCC---EEEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 35777899999999999999 444432 57999999 89999998865555699999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+||+++.++.++++|||++....... .
T Consensus 126 H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~---------------------------------~-------------- 158 (282)
T cd06643 126 HRDLKAGNILFTLDGDIKLADFGVSAKNTRTI---------------------------------Q-------------- 158 (282)
T ss_pred ecCCCcccEEEccCCCEEEccccccccccccc---------------------------------c--------------
Confidence 99999999999999999999998873221000 0
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCcccc-----CCCCCccccchhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-----GAPVSCASDIYRLG 298 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~-----~~~~s~~sDIwSLG 298 (720)
......|++.|+|||++. +..++.++||||||
T Consensus 159 -------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG 195 (282)
T cd06643 159 -------------------------------------------RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLG 195 (282)
T ss_pred -------------------------------------------ccccccccccccCHhhccccCCCCCCCCccchhhhHH
Confidence 000135788999999984 33478899999999
Q ss_pred hhhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 299 VLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|++|||++ ||......................+..++ ...+||.+||+++|.+||++.++++||||...
T Consensus 196 vil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 268 (282)
T cd06643 196 ITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQHPFVTVN 268 (282)
T ss_pred HHHHHHccCCCCccccCHHHHHHHHhhcCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCCCEecc
Confidence 99999998 66554443333332222111111222334 45599999999999999999999999999975
No 127
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=99.97 E-value=1.1e-30 Score=282.20 Aligned_cols=208 Identities=15% Similarity=0.221 Sum_probs=159.3
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|..++..++||||+++++ .+.+.. .+|+|||| .|++|.+++.+....+++..++.++.||+.||+|||++||+|
T Consensus 50 ~e~~~l~~~~~~~i~~l~~-~~~~~~---~~~lv~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiH 125 (331)
T cd05624 50 EERNVLVNGDCQWITTLHY-AFQDEN---YLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVH 125 (331)
T ss_pred HHHHHHHhCCCCCEeeEEE-EEEcCC---EEEEEEeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeee
Confidence 4566788899999999999 555443 67999999 899999999664456999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+|||++.++.+||+|||++........
T Consensus 126 rDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~------------------------------------------------ 157 (331)
T cd05624 126 RDIKPDNVLLDMNGHIRLADFGSCLKMNQDGT------------------------------------------------ 157 (331)
T ss_pred ccCchHHEEEcCCCCEEEEeccceeeccCCCc------------------------------------------------
Confidence 99999999999999999999998743211100
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-----CCCCccccchhhhh
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-----APVSCASDIYRLGV 299 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-----~~~s~~sDIwSLGv 299 (720)
.......||+.|+|||++.+ ..++.++|||||||
T Consensus 158 -----------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGv 196 (331)
T cd05624 158 -----------------------------------------VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGV 196 (331)
T ss_pred -----------------------------------------eeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeeh
Confidence 00011368999999999876 45789999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhcC----CCCccccccCchHHHHHHHcCCCCCCC--CCChHHHHcCcccCCC
Q 004998 300 LLFELFC---PFSTGEEKTRTMSSLRHR----VLPPQLLLKFPKEASFCLWLLHPEPSG--RPKMGELLQSEFLNEP 367 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~~----~~p~~~~~~~p~~~~li~~~L~~dP~~--Rpta~eiL~hp~~~~~ 367 (720)
+||||++ ||....... ....+... .+|+......+...+|+.+||..++.+ |++++++++||||...
T Consensus 197 il~ell~g~~Pf~~~~~~~-~~~~i~~~~~~~~~p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h~~f~~~ 272 (331)
T cd05624 197 CMYEMLYGETPFYAESLVE-TYGKIMNHEERFQFPSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHAFFEGI 272 (331)
T ss_pred hhhhhhhCCCCccCCCHHH-HHHHHHcCCCcccCCCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcCCCcCCC
Confidence 9999999 676544432 23333221 123333223345559999999876654 4689999999999874
No 128
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=99.97 E-value=2.1e-30 Score=277.57 Aligned_cols=242 Identities=17% Similarity=0.188 Sum_probs=168.4
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+...|..+|..++||||+++++ .+.... .+|++||| .|++|.+++.+ ....+++..++.++.||+.||.|||+.
T Consensus 47 ~~~~e~~~l~~l~~~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~ 122 (316)
T cd05574 47 RVLTEQEILATLDHPFLPTLYA-SFQTET---YLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLL 122 (316)
T ss_pred HHHHHHHHHHhCCCCCchhhee-eeecCC---EEEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHC
Confidence 3446777999999999999999 444433 67999999 89999999954 345699999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004998 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+|+||||+||+++.++.++|+|||++........... . ....+...
T Consensus 123 ~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~---~-----------------------~~~~~~~~------ 170 (316)
T cd05574 123 GIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPVS---K-----------------------ALRKGSRR------ 170 (316)
T ss_pred CeeccCCChHHeEEcCCCCEEEeecchhhcccccccccc---c-----------------------cccccccc------
Confidence 999999999999999999999999999854322110000 0 00000000
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhh
Q 004998 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
..... ...+.............+||..|+|||++.+..++.++|||||||+
T Consensus 171 -~~~~~----------------------------~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~l 221 (316)
T cd05574 171 -SSVNS----------------------------IPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGIL 221 (316)
T ss_pred -ccccc----------------------------cchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHH
Confidence 00000 0000000000001122578999999999998889999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCC----hHHHHcCcccCCCcc
Q 004998 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK----MGELLQSEFLNEPRD 369 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpt----a~eiL~hp~~~~~~~ 369 (720)
+|+|++ ||............+......+......+...+|+.+||+.||++||| ++|+|+||||+....
T Consensus 222 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~~~~~~~~ 297 (316)
T cd05574 222 LYEMLYGTTPFKGSNRDETFSNILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFFRGVNW 297 (316)
T ss_pred HHHHhhCCCCCCCCchHHHHHHHhcCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCchhhcCCh
Confidence 999999 665544433333223222222222112344559999999999999999 999999999998643
No 129
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=99.97 E-value=2.8e-30 Score=279.24 Aligned_cols=208 Identities=17% Similarity=0.227 Sum_probs=158.7
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|..++..++||||+++++ ++.+.. .+|+|||| .+++|.+++.+....+++..++.++.||+.||.|||++||+|
T Consensus 50 ~e~~~l~~~~~~~i~~~~~-~~~~~~---~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiH 125 (332)
T cd05623 50 EERDVLVNGDNQWITTLHY-AFQDEN---NLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVH 125 (332)
T ss_pred HHHHHHhhCCCCCEeeEEE-EEecCC---EEEEEEeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEe
Confidence 4566788899999999999 555543 67999999 899999999665556999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+|||++.++.++|+|||++....... .
T Consensus 126 rDlkp~Nili~~~~~~kL~DfG~a~~~~~~~---------------------------------~--------------- 157 (332)
T cd05623 126 RDIKPDNILMDMNGHIRLADFGSCLKLMEDG---------------------------------T--------------- 157 (332)
T ss_pred cCCCHHHEEECCCCCEEEeecchheecccCC---------------------------------c---------------
Confidence 9999999999999999999998873221000 0
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-----CCCCccccchhhhh
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-----APVSCASDIYRLGV 299 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-----~~~s~~sDIwSLGv 299 (720)
......+||+.|+|||++.+ ..++.++|||||||
T Consensus 158 -----------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGv 196 (332)
T cd05623 158 -----------------------------------------VQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGV 196 (332)
T ss_pred -----------------------------------------ceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHH
Confidence 00011468999999999863 34899999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhcC----CCCccccccCchHHHHHHHcCCCCCCC--CCChHHHHcCcccCCC
Q 004998 300 LLFELFC---PFSTGEEKTRTMSSLRHR----VLPPQLLLKFPKEASFCLWLLHPEPSG--RPKMGELLQSEFLNEP 367 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~~----~~p~~~~~~~p~~~~li~~~L~~dP~~--Rpta~eiL~hp~~~~~ 367 (720)
++|||++ ||...... ..+..+... .+|.......+...+|+.+||..+|.. |+++.|+++||||...
T Consensus 197 il~ell~g~~Pf~~~~~~-~~~~~i~~~~~~~~~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h~~f~~~ 272 (332)
T cd05623 197 CMYEMLYGETPFYAESLV-ETYGKIMNHKERFQFPAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQHPFFTGI 272 (332)
T ss_pred HHHHHhcCCCCCCCCCHH-HHHHHHhCCCccccCCCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCCCCcCCC
Confidence 9999999 67655443 233333322 123322233444559999999765544 6899999999999875
No 130
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=99.97 E-value=1.2e-30 Score=275.69 Aligned_cols=206 Identities=16% Similarity=0.210 Sum_probs=159.0
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.|..++.+++|+||+.+++ .+.+.. .+|++||| .|++|.+++.. ....+++..+..++.||+.||.|||+.||+
T Consensus 49 ~E~~il~~l~~~~i~~~~~-~~~~~~---~~~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ii 124 (285)
T cd05630 49 NEKQILEKVNSRFVVSLAY-AYETKD---ALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIV 124 (285)
T ss_pred HHHHHHHhCCCCCeeeeeE-EEecCC---EEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEE
Confidence 5778999999999999999 444443 68999999 89999999843 334589999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+||+++.++.++|+|||++.......
T Consensus 125 H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~------------------------------------------------ 156 (285)
T cd05630 125 YRDLKPENILLDDHGHIRISDLGLAVHVPEGQ------------------------------------------------ 156 (285)
T ss_pred eCCCCHHHEEECCCCCEEEeeccceeecCCCc------------------------------------------------
Confidence 99999999999999999999988763210000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......||+.|+|||++.+..++.++|||||||++|+
T Consensus 157 -------------------------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~ 193 (285)
T cd05630 157 -------------------------------------------TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYE 193 (285)
T ss_pred -------------------------------------------cccCCCCCccccChHHHcCCCCCCccccHHHHHHHHH
Confidence 0001367999999999998889999999999999999
Q ss_pred ccc---cCCCCchH--HHHHHHhhcCCCCccccc-cCchHHHHHHHcCCCCCCCCCC-----hHHHHcCcccCCC
Q 004998 304 LFC---PFSTGEEK--TRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~~~--~~~~~~l~~~~~p~~~~~-~~p~~~~li~~~L~~dP~~Rpt-----a~eiL~hp~~~~~ 367 (720)
|++ ||...... ......+.... +..+.. ..+...+|+.+||+.||.+||| +.|+++||||.+.
T Consensus 194 l~~g~~Pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~~~~~ 267 (285)
T cd05630 194 MIAGQSPFQQRKKKIKREEVERLVKEV-QEEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHPLFKQI 267 (285)
T ss_pred HHhCCCCCCCCCccchHHHHHhhhhhh-hhhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcChhhhcc
Confidence 999 66543211 11111111111 112222 2344569999999999999999 8999999999875
No 131
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=99.97 E-value=2.7e-30 Score=269.19 Aligned_cols=212 Identities=17% Similarity=0.216 Sum_probs=162.8
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..+|++++||||+++++ ++.+. ..++++||| .|++|.+++.+.. .+++..++.++.||+.||+|||+.||
T Consensus 49 ~~~e~~~l~~l~~~~i~~~~~-~~~~~---~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i 123 (265)
T cd06631 49 LQEEVDLLKSLKHVNIVQYLG-TCLDD---NTISIFMEFVPGGSISSILNRFG-PLPEPVFCKYTKQILDGVAYLHNNCV 123 (265)
T ss_pred HHHHHHHHHhcCCCCEeeEee-EeecC---CeEEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 446778999999999999999 55444 368999999 8999999995543 48999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+|+||||+||++++++.++|+|||.+......... ...
T Consensus 124 ~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~------------------------------~~~------------ 161 (265)
T cd06631 124 VHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLH------------------------------GTH------------ 161 (265)
T ss_pred ccCCcCHHhEEECCCCeEEeccchhhHhhhhcccc------------------------------ccc------------
Confidence 99999999999999999999999887432111000 000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
........|+..|+|||.+.+..++.++|||||||++|
T Consensus 162 ------------------------------------------~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~ 199 (265)
T cd06631 162 ------------------------------------------SNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVF 199 (265)
T ss_pred ------------------------------------------cccccccCCCccccChhhhcCCCCcchhhHHHHHHHHH
Confidence 00000135789999999999888999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCCCCccccccCch-HHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004998 303 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~-~~~li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
+|++ ||...+...............+.+...++. ..+|+.+||+++|.+||++.++++||||
T Consensus 200 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~ 265 (265)
T cd06631 200 EMATGKPPLASMDRLAAMFYIGAHRGLMPRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLRHDFL 265 (265)
T ss_pred HHHhCCCccccCChHHHHHHhhhccCCCCCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 9999 665544433333222222222333334444 4599999999999999999999999997
No 132
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=99.97 E-value=2.9e-30 Score=274.70 Aligned_cols=211 Identities=15% Similarity=0.185 Sum_probs=158.8
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..+|..++..++||||+++++ ++..+. .+|++|||.+++|.+++......+++..++.++.||+.||.|||++||+
T Consensus 51 ~~~E~~~l~~l~h~nI~~~~~-~~~~~~---~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~ 126 (301)
T cd07873 51 AIREVSLLKDLKHANIVTLHD-IIHTEK---SLTLVFEYLDKDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVL 126 (301)
T ss_pred HHHHHHHHHhcCCCCcceEEE-EEecCC---eEEEEEeccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 346788999999999999999 554443 5799999966799999966556689999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
|+||||+||+++.++.++|+|||.+........
T Consensus 127 H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~----------------------------------------------- 159 (301)
T cd07873 127 HRDLKPQNLLINERGELKLADFGLARAKSIPTK----------------------------------------------- 159 (301)
T ss_pred CCCCCHHHEEECCCCcEEECcCcchhccCCCCC-----------------------------------------------
Confidence 999999999999999999999988733211100
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC-CCccccchhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLF 302 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGvll~ 302 (720)
......+++.|+|||++.+.. ++.++|||||||++|
T Consensus 160 -------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~ 196 (301)
T cd07873 160 -------------------------------------------TYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFY 196 (301)
T ss_pred -------------------------------------------cccccceeecccCcHHHhCCCCCccHHHHHHHHHHHH
Confidence 000124688999999987654 789999999999999
Q ss_pred hccc---cCCCCchHHHHHH--HhhcC------------------CCCcc-------c-cccCchHHHHHHHcCCCCCCC
Q 004998 303 ELFC---PFSTGEEKTRTMS--SLRHR------------------VLPPQ-------L-LLKFPKEASFCLWLLHPEPSG 351 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~--~l~~~------------------~~p~~-------~-~~~~p~~~~li~~~L~~dP~~ 351 (720)
||++ ||........... .+... ..+.. . ....+...+||.+||++||.+
T Consensus 197 el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~ 276 (301)
T cd07873 197 EMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRK 276 (301)
T ss_pred HHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCccc
Confidence 9999 5654432211111 10000 00100 0 012234459999999999999
Q ss_pred CCChHHHHcCcccCCCc
Q 004998 352 RPKMGELLQSEFLNEPR 368 (720)
Q Consensus 352 Rpta~eiL~hp~~~~~~ 368 (720)
|||+.|+|+||||....
T Consensus 277 R~t~~eil~h~~f~~~~ 293 (301)
T cd07873 277 RISAEEAMKHPYFHCLG 293 (301)
T ss_pred CcCHHHHhcCccccccc
Confidence 99999999999998764
No 133
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=99.97 E-value=4.1e-30 Score=267.92 Aligned_cols=210 Identities=16% Similarity=0.217 Sum_probs=161.2
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..++++++||||+++++ ++.... ..+++||| .+++|.+++... ..+++..+..++.||+.||.|||+.|+
T Consensus 53 ~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~l~~~l~~lH~~~i 127 (267)
T cd06628 53 LAREIALLKELQHENIVQYLG-SSLDAD---HLNIFLEYVPGGSVAALLNNY-GAFEETLVRNFVRQILKGLNYLHNRGI 127 (267)
T ss_pred HHHHHHHHHhcCCCCeeeEEE-EEEeCC---ccEEEEEecCCCCHHHHHHhc-cCccHHHHHHHHHHHHHHHHHHHhcCc
Confidence 346788999999999999999 444433 57899999 899999999554 448999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||+|+||++++++.++|+|||.+.......... ..
T Consensus 128 vH~di~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~------------------------------~~------------ 165 (267)
T cd06628 128 IHRDIKGANILVDNKGGIKISDFGISKKLEANSLST------------------------------KT------------ 165 (267)
T ss_pred ccccCCHHHEEEcCCCCEEecccCCCcccccccccC------------------------------Cc------------
Confidence 999999999999999999999998874432110000 00
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
........|+..|+|||.+.+..++.++|||||||++|
T Consensus 166 ------------------------------------------~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~ 203 (267)
T cd06628 166 ------------------------------------------NGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVV 203 (267)
T ss_pred ------------------------------------------cccccccCCCcCccChhHhccCCCCchhhhHHHHHHHH
Confidence 00001135788999999998888999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004998 303 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
+|++ ||........ ...+.....+ .+.... ....+||.+||++||.+||++.++++||||
T Consensus 204 ~l~~g~~p~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 267 (267)
T cd06628 204 EMLTGKHPFPDCTQLQA-IFKIGENASP-EIPSNISSEAIDFLEKTFEIDHNKRPTAAELLKHPFL 267 (267)
T ss_pred HHhhCCCCCCCccHHHH-HHHHhccCCC-cCCcccCHHHHHHHHHHccCCchhCcCHHHHhhCCCC
Confidence 9999 6665444322 2233232222 233333 344599999999999999999999999997
No 134
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=99.97 E-value=4.9e-30 Score=265.27 Aligned_cols=206 Identities=18% Similarity=0.239 Sum_probs=162.7
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
...|..++++++||||+++++ .+... ...|++||| .|++|.+++... ...+++..++.++.||+.||.|||+.|
T Consensus 46 ~~~e~~~l~~l~h~~i~~~~~-~~~~~---~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~ 121 (256)
T cd08529 46 AIDEARVLAKLDSSYIIRYYE-SFLDK---GKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKK 121 (256)
T ss_pred HHHHHHHHHhcCCCCeehhee-eeccC---CEEEEEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 336777899999999999999 44433 268999999 899999999543 456899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+|+||||+||+++.++.++|+|||.+........
T Consensus 122 i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~--------------------------------------------- 156 (256)
T cd08529 122 ILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTN--------------------------------------------- 156 (256)
T ss_pred cccCCCCcceEEEeCCCCEEEcccccceeccCccc---------------------------------------------
Confidence 99999999999999999999999887743211100
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......|+++|+|||++.+..++.++|||||||++
T Consensus 157 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 191 (256)
T cd08529 157 ---------------------------------------------FANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVL 191 (256)
T ss_pred ---------------------------------------------hhhccccCccccCHHHhcCCCCCCccchHHHHHHH
Confidence 00013578899999999988899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
|+|++ ||...... .....+.....++......+...+++.+||+.+|++||++.++++|||+
T Consensus 192 ~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 256 (256)
T cd08529 192 YECCTGKHPFDANNQG-ALILKIIRGVFPPVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRNPSL 256 (256)
T ss_pred HHHHhCCCCCCCCCHH-HHHHHHHcCCCCCCccccCHHHHHHHHHHccCCcccCcCHHHHhhCCCC
Confidence 99999 66655433 3333344444443322333455699999999999999999999999996
No 135
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=99.97 E-value=3.4e-30 Score=266.81 Aligned_cols=207 Identities=17% Similarity=0.245 Sum_probs=161.3
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
...|..++++++||||+++++ .+.... ..+|++||| .+++|.+++.. ....+++.+++.++.||+.||.|||+.|
T Consensus 46 ~~~e~~~l~~l~~~~i~~~~~-~~~~~~--~~~~lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~ 122 (257)
T cd08223 46 AEQEAQLLSQLKHPNIVAYRE-SWEGED--GLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKH 122 (257)
T ss_pred HHHHHHHHHhCCCCCeeeeee-eecCCC--CEEEEEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 346777899999999999998 333221 257999999 88999999954 3445899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+|+||||+||+++.++.++|+|||.+....... .
T Consensus 123 i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~---------------------------------~------------ 157 (257)
T cd08223 123 ILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQC---------------------------------D------------ 157 (257)
T ss_pred eeccCCCchhEEEecCCcEEEecccceEEecccC---------------------------------C------------
Confidence 9999999999999999999999988773221100 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......|++.|+|||++.+..++.++|||||||++
T Consensus 158 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il 192 (257)
T cd08223 158 ---------------------------------------------MASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCV 192 (257)
T ss_pred ---------------------------------------------ccccccCCcCccChhHhcCCCCCchhhhHHHHHHH
Confidence 00013578899999999988899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
|+|++ ||...+.. .....+..+.+++......+...+|+.+||.++|.+||++.++++||||
T Consensus 193 ~~l~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~ 257 (257)
T cd08223 193 YEMATLKHAFNAKDMN-SLVYRIIEGKLPPMPKDYSPELGELIATMLSKRPEKRPSVKSILRQPYI 257 (257)
T ss_pred HHHHcCCCCCCCCCHH-HHHHHHHhcCCCCCccccCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 99999 56544433 2333333443433322333455699999999999999999999999997
No 136
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=99.97 E-value=2.8e-30 Score=271.89 Aligned_cols=205 Identities=17% Similarity=0.216 Sum_probs=154.9
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhC--CCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK--PKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~--~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.|..++.+++||||+++++ ++..+. .+|+||||..++|.+++.. .+..+++..++.++.||+.||.|||++||+
T Consensus 48 ~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~~v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~ 123 (285)
T cd07861 48 REISLLKELQHPNIVCLQD-VLMQES---RLYLIFEFLSMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVL 123 (285)
T ss_pred HHHHHHHhcCCCCEeeeEE-EEeeCC---eEEEEEecCCCCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 5778999999999999999 454443 6799999966799999843 224589999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+||+++.++.++|+|||++...+.+..
T Consensus 124 H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~----------------------------------------------- 156 (285)
T cd07861 124 HRDLKPQNLLIDNKGVIKLADFGLARAFGIPVR----------------------------------------------- 156 (285)
T ss_pred ecCCCHHHEEEcCCCcEEECcccceeecCCCcc-----------------------------------------------
Confidence 999999999999999999999988743221100
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC-CCccccchhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLF 302 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGvll~ 302 (720)
......+++.|+|||.+.+.. ++.++|||||||++|
T Consensus 157 -------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~ 193 (285)
T cd07861 157 -------------------------------------------VYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFA 193 (285)
T ss_pred -------------------------------------------cccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHH
Confidence 000125688999999987654 789999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCC-------------------C--------CccccccCchHHHHHHHcCCCCCCCC
Q 004998 303 ELFC---PFSTGEEKTRTMSSLRHRV-------------------L--------PPQLLLKFPKEASFCLWLLHPEPSGR 352 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~~-------------------~--------p~~~~~~~p~~~~li~~~L~~dP~~R 352 (720)
+|++ ||............+.... . ........++..+||.+||+.||.+|
T Consensus 194 ~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R 273 (285)
T cd07861 194 EMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKR 273 (285)
T ss_pred HHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhC
Confidence 9999 5554433222222111000 0 00011123445599999999999999
Q ss_pred CChHHHHcCccc
Q 004998 353 PKMGELLQSEFL 364 (720)
Q Consensus 353 pta~eiL~hp~~ 364 (720)
||+.+++.||||
T Consensus 274 pt~~~ll~~~~~ 285 (285)
T cd07861 274 ISAKKALNHPYF 285 (285)
T ss_pred CCHHHHhcCCCC
Confidence 999999999997
No 137
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=99.97 E-value=5.6e-30 Score=267.31 Aligned_cols=211 Identities=18% Similarity=0.201 Sum_probs=158.8
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++++++||||+++++ ++.... ...++++||| .+++|.+++.... .+++..++.++.||+.||.|||++|
T Consensus 50 ~~~~e~~~l~~l~h~~i~~~~~-~~~~~~-~~~~~l~~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~LH~~~ 126 (266)
T cd06651 50 ALECEIQLLKNLQHERIVQYYG-CLRDRA-EKTLTIFMEYMPGGSVKDQLKAYG-ALTESVTRKYTRQILEGMSYLHSNM 126 (266)
T ss_pred HHHHHHHHHHHcCCCCeeeEEE-EEEcCC-CCEEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 4456778999999999999999 443322 2367999999 8899999995543 4899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++.++|+|||++........ .+.
T Consensus 127 i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~~-------------------------------~~~----------- 164 (266)
T cd06651 127 IVHRDIKGANILRDSAGNVKLGDFGASKRLQTICM-------------------------------SGT----------- 164 (266)
T ss_pred eeeCCCCHHHEEECCCCCEEEccCCCccccccccc-------------------------------cCC-----------
Confidence 99999999999999999999999887733210000 000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......++..|+|||.+.+..++.++|||||||++
T Consensus 165 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~ 199 (266)
T cd06651 165 ---------------------------------------------GIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTV 199 (266)
T ss_pred ---------------------------------------------ccccCCccccccCHHHhCCCCCCchhhhHHHHHHH
Confidence 00013568899999999988899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccccCchH-HHHHHHcCCCCCCCCCChHHHHcCcccC
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKE-ASFCLWLLHPEPSGRPKMGELLQSEFLN 365 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~-~~li~~~L~~dP~~Rpta~eiL~hp~~~ 365 (720)
|||++ ||.......... .+......+.+....+.. .+|+ +||..+|++||+++|+++||||+
T Consensus 200 ~el~~g~~pf~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~hp~~~ 265 (266)
T cd06651 200 VEMLTEKPPWAEYEAMAAIF-KIATQPTNPQLPSHISEHARDFL-GCIFVEARHRPSAEELLRHPFAQ 265 (266)
T ss_pred HHHHHCCCCccccchHHHHH-HHhcCCCCCCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhcCcccc
Confidence 99999 565443333332 222222233333333333 4666 67789999999999999999986
No 138
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=3.9e-31 Score=302.30 Aligned_cols=236 Identities=18% Similarity=0.232 Sum_probs=179.8
Q ss_pred CccceeeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHH
Q 004998 58 NDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYA 136 (720)
Q Consensus 58 ~~~~~r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~y 136 (720)
...-||+||+ +|...+.++|++++. .|+++. ++|+|||| +||+|..+|.+.+ .+|+.-++.|+..|+.||+-
T Consensus 118 ~tA~F~EERD--imv~~ns~Wiv~Lhy-AFQD~~---~LYlVMdY~pGGDlltLlSk~~-~~pE~~ArFY~aEiVlAlds 190 (1317)
T KOG0612|consen 118 ETACFREERD--IMVFGNSEWIVQLHY-AFQDER---YLYLVMDYMPGGDLLTLLSKFD-RLPEDWARFYTAEIVLALDS 190 (1317)
T ss_pred hHHHHHHHhH--HHHcCCcHHHHHHHH-HhcCcc---ceEEEEecccCchHHHHHhhcC-CChHHHHHHHHHHHHHHHHH
Confidence 3566788888 667778999999998 677775 67999999 9999999997777 69999999999999999999
Q ss_pred HHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCC
Q 004998 137 AHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 216 (720)
Q Consensus 137 LHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~ 216 (720)
||+.|+|||||||+||||+..|++||+|||.|-..+.+ |.+
T Consensus 191 lH~mgyVHRDiKPDNvLld~~GHikLADFGsClkm~~d------------------------------------G~V--- 231 (1317)
T KOG0612|consen 191 LHSMGYVHRDIKPDNVLLDKSGHIKLADFGSCLKMDAD------------------------------------GTV--- 231 (1317)
T ss_pred HHhccceeccCCcceeEecccCcEeeccchhHHhcCCC------------------------------------CcE---
Confidence 99999999999999999999999999999999443322 111
Q ss_pred CCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCcccc----C-CCCCcc
Q 004998 217 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA----G-APVSCA 291 (720)
Q Consensus 217 ~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~----~-~~~s~~ 291 (720)
.....+|||.|++||++. + +.|++.
T Consensus 232 --------------------------------------------------~s~~aVGTPDYISPEvLqs~~~~~g~yG~e 261 (1317)
T KOG0612|consen 232 --------------------------------------------------RSSVAVGTPDYISPEVLQSQGDGKGEYGRE 261 (1317)
T ss_pred --------------------------------------------------EeccccCCCCccCHHHHHhhcCCccccCCc
Confidence 112258999999999994 2 349999
Q ss_pred ccchhhhhhhhhccc---cCCCCchHHHHHHHhh-c---CCCCccccccCchHHHHHHHcCCCCCCCCCC---hHHHHcC
Q 004998 292 SDIYRLGVLLFELFC---PFSTGEEKTRTMSSLR-H---RVLPPQLLLKFPKEASFCLWLLHPEPSGRPK---MGELLQS 361 (720)
Q Consensus 292 sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~-~---~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpt---a~eiL~h 361 (720)
+|+|||||++|||++ ||....-. .++..|. + -.+|+. ....+...+||.++| -+|+.|.. +++|..|
T Consensus 262 cDwWSlGV~~YEMlyG~TPFYadslv-eTY~KIm~hk~~l~FP~~-~~VSeeakdLI~~ll-~~~e~RLgrngiedik~H 338 (1317)
T KOG0612|consen 262 CDWWSLGVFMYEMLYGETPFYADSLV-ETYGKIMNHKESLSFPDE-TDVSEEAKDLIEALL-CDREVRLGRNGIEDIKNH 338 (1317)
T ss_pred cchhhhHHHHHHHHcCCCcchHHHHH-HHHHHHhchhhhcCCCcc-cccCHHHHHHHHHHh-cChhhhcccccHHHHHhC
Confidence 999999999999998 88876544 3333333 3 234522 233344459999988 57888886 9999999
Q ss_pred cccCCCccchHHHHHHHHHhhhhhHHHHHHHH
Q 004998 362 EFLNEPRDSMEEREAAIELREQIDEEELLLEF 393 (720)
Q Consensus 362 p~~~~~~~~l~e~~~~~~~~e~~~~~e~L~~f 393 (720)
|||.+..- -.-++..+|+.+..........|
T Consensus 339 pFF~g~~W-~~iR~~~pP~vPevssd~DTsnF 369 (1317)
T KOG0612|consen 339 PFFEGIDW-DNIRESVPPVVPEVSSDDDTSNF 369 (1317)
T ss_pred ccccCCCh-hhhhhcCCCCCCcCCCCCccccc
Confidence 99998733 22334445555544443334444
No 139
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.97 E-value=6.7e-30 Score=272.13 Aligned_cols=212 Identities=17% Similarity=0.256 Sum_probs=156.6
Q ss_pred eehhhhcccCCCCCceecccceeecCC-----CCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEA-----AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~-----~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
.+|..++++++||||+++++ ++.... .....+++|||.+++|.+++......+++.+++.++.||+.||.|||+
T Consensus 59 ~~e~~~l~~l~h~~iv~~~~-~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~ 137 (310)
T cd07865 59 LREIKILQLLKHENVVNLIE-ICRTKATPYNRYKGSFYLVFEFCEHDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHR 137 (310)
T ss_pred HHHHHHHHhCCCCCccceEE-EEecccccccCCCceEEEEEcCCCcCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHH
Confidence 36778999999999999999 443332 224579999997789999986655569999999999999999999999
Q ss_pred cCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004998 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||+|+||||+||+++.++.++|+|||.+......... .
T Consensus 138 ~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~--------------------------------~--------- 176 (310)
T cd07865 138 NKILHRDMKAANILITKDGILKLADFGLARAFSLSKNS--------------------------------K--------- 176 (310)
T ss_pred CCeeccCCCHHHEEECCCCcEEECcCCCcccccCCccc--------------------------------C---------
Confidence 99999999999999999999999999887432111000 0
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC-CCccccchhhh
Q 004998 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLG 298 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLG 298 (720)
+.......++..|+|||.+.+.. ++.++||||||
T Consensus 177 ---------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG 211 (310)
T cd07865 177 ---------------------------------------------PNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAG 211 (310)
T ss_pred ---------------------------------------------CCCccCcccCccccCcHHhcCCcccCchhhhHHHH
Confidence 00000135788999999987654 78999999999
Q ss_pred hhhhhccc---cCCCCchHH--HHHHHhhcCCCCccc---------------------------c--ccCchHHHHHHHc
Q 004998 299 VLLFELFC---PFSTGEEKT--RTMSSLRHRVLPPQL---------------------------L--LKFPKEASFCLWL 344 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~--~~~~~l~~~~~p~~~---------------------------~--~~~p~~~~li~~~ 344 (720)
|++|||++ ||....... .....+... +++.. . ...+...+||.+|
T Consensus 212 ~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~ 290 (310)
T cd07865 212 CIMAEMWTRSPIMQGNTEQHQLTLISQLCGS-ITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKL 290 (310)
T ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHHHhCC-CChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHH
Confidence 99999998 454433221 111111111 11100 0 0123445899999
Q ss_pred CCCCCCCCCChHHHHcCccc
Q 004998 345 LHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 345 L~~dP~~Rpta~eiL~hp~~ 364 (720)
|+.||.+|||++|+|+||||
T Consensus 291 l~~~P~~R~t~~e~l~h~~f 310 (310)
T cd07865 291 LVLDPAKRIDADTALNHDFF 310 (310)
T ss_pred hcCChhhccCHHHHhcCCCC
Confidence 99999999999999999998
No 140
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=99.97 E-value=4.1e-30 Score=268.64 Aligned_cols=203 Identities=14% Similarity=0.176 Sum_probs=156.6
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
...+|...+.+++||||+++++ ++.... .+++|||| .+++|.+++......+++..++.++.||+.||+|||++|
T Consensus 52 ~~~~e~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~ 127 (266)
T cd05064 52 GFLAEALTLGQFDHSNIVRLEG-VITRGN---TMMIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMG 127 (266)
T ss_pred HHHHHHHHHhcCCCCCcCeEEE-EEecCC---CcEEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3457888999999999999999 444433 57999999 889999999665556999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
++||||||+|||++.++.++++|||.+....... .
T Consensus 128 iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~----------------------------------~----------- 162 (266)
T cd05064 128 YVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEA----------------------------------I----------- 162 (266)
T ss_pred EeeccccHhhEEEcCCCcEEECCCcccccccccc----------------------------------h-----------
Confidence 9999999999999999999998888652210000 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
. ......++..|+|||.+.+..++.++|||||||++
T Consensus 163 -------------------------~-------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l 198 (266)
T cd05064 163 -------------------------Y-------------------TTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVM 198 (266)
T ss_pred -------------------------h-------------------cccCCCCceeecCHHHHhhCCccchhHHHHHHHHH
Confidence 0 00002346789999999988899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||...... .....+..+..++. +..+| ...+++..||.++|.+||++.+|++
T Consensus 199 ~ell~~g~~p~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~ 260 (266)
T cd05064 199 WEVMSYGERPYWDMSGQ-DVIKAVEDGFRLPA-PRNCPNLLHQLMLDCWQKERGERPRFSQIHS 260 (266)
T ss_pred HHHhcCCCCCcCcCCHH-HHHHHHHCCCCCCC-CCCCCHHHHHHHHHHcCCCchhCCCHHHHHH
Confidence 99775 66554433 33444444433332 33444 4459999999999999999999975
No 141
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=99.97 E-value=1.4e-29 Score=268.05 Aligned_cols=210 Identities=17% Similarity=0.213 Sum_probs=160.0
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
+|..+++.++||||+++++ .+..+. .+|+|||| .|++|..++.+....+++..++.++.||+.||.|||++||+|
T Consensus 58 ~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H 133 (292)
T cd06644 58 VEIEILATCNHPYIVKLLG-AFYWDG---KLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIH 133 (292)
T ss_pred HHHHHHHhCCCCcEeeeEE-EEEeCC---eEEEEEecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeee
Confidence 5777899999999999999 444332 68999999 899999888655556999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+||+++.++.++|+|||.+.......
T Consensus 134 ~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~------------------------------------------------- 164 (292)
T cd06644 134 RDLKAGNVLLTLDGDIKLADFGVSAKNVKTL------------------------------------------------- 164 (292)
T ss_pred cCCCcceEEEcCCCCEEEccCccceeccccc-------------------------------------------------
Confidence 9999999999999999999998763211000
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-----CCCCccccchhhhh
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-----APVSCASDIYRLGV 299 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-----~~~s~~sDIwSLGv 299 (720)
.......+++.|+|||++.+ ..++.++|||||||
T Consensus 165 -----------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~ 203 (292)
T cd06644 165 -----------------------------------------QRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGI 203 (292)
T ss_pred -----------------------------------------cccceecCCccccCceeeccccccCCCCCchhhhHhHHH
Confidence 00001357889999999853 34788999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhcCCCCc-cccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCCccc
Q 004998 300 LLFELFC---PFSTGEEKTRTMSSLRHRVLPP-QLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~~~~p~-~~~~~~-p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
++|||++ ||...... .....+.....+. .....+ .+..+|+.+||+.+|++||++.++++||||......
T Consensus 204 il~el~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~~ 278 (292)
T cd06644 204 TLIEMAQIEPPHHELNPM-RVLLKIAKSEPPTLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEHPFVSSVTSN 278 (292)
T ss_pred HHHHHhcCCCCCccccHH-HHHHHHhcCCCccCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcCccccccccc
Confidence 9999999 55443332 2223333222221 112223 345699999999999999999999999999876443
No 142
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=99.97 E-value=7.3e-30 Score=266.82 Aligned_cols=209 Identities=16% Similarity=0.214 Sum_probs=155.7
Q ss_pred eehhhhcccC-CCCCceecccceeecCCC--CCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004998 65 HSDGVELTHG-DHLRNQGGLSGVCENEAA--IDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 65 ~~e~~~Ls~l-~HpnIV~l~~~~~~~~~~--~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
..|..++.++ +||||+++++.+...... ...+|++||| .+++|.+++.. ....+++..++.++.||+.||+|||+
T Consensus 50 ~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~ 129 (272)
T cd06637 50 KQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQ 129 (272)
T ss_pred HHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 3566677777 799999999944433221 2358999999 88999999954 33458999999999999999999999
Q ss_pred cCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004998 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||+|+||||+||+++.++.++|+|||++...... .+
T Consensus 130 ~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~~~~~-----------------------------------~~-------- 166 (272)
T cd06637 130 HKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRT-----------------------------------VG-------- 166 (272)
T ss_pred CCCccCCCCHHHEEECCCCCEEEccCCCceecccc-----------------------------------cc--------
Confidence 99999999999999999999999999887322100 00
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-----CCCCccccc
Q 004998 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-----APVSCASDI 294 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-----~~~s~~sDI 294 (720)
......|++.|+|||++.+ ..++.++||
T Consensus 167 -----------------------------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv 199 (272)
T cd06637 167 -----------------------------------------------RRNTFIGTPYWMAPEVIACDENPDATYDFKSDL 199 (272)
T ss_pred -----------------------------------------------cCCcccccccccCHhHhccccCcCCCCCchhhH
Confidence 0011467899999999863 348889999
Q ss_pred hhhhhhhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004998 295 YRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 295 wSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
|||||++|||++ ||.............. ...+......++ ...+|+.+||..+|.+|||+.+++.||||
T Consensus 200 ~slGv~l~el~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~~ 272 (272)
T cd06637 200 WSLGITAIEMAEGAPPLCDMHPMRALFLIPR-NPAPRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKHPFI 272 (272)
T ss_pred HHHHHHHHHHHhCCCCccccCHHHHHHHHhc-CCCCCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhCCCC
Confidence 999999999999 5544333322222221 111222222333 44599999999999999999999999997
No 143
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=99.97 E-value=8.4e-30 Score=267.87 Aligned_cols=208 Identities=20% Similarity=0.260 Sum_probs=160.8
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..++++++||||+++++ .+.... .+|+|||| .+++|.+++.+....+++..++.++.||+.||.|||++||+
T Consensus 50 ~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~ 125 (280)
T cd06611 50 MVEIDILSECKHPNIVGLYE-AYFYEN---KLWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVI 125 (280)
T ss_pred HHHHHHHHhCCCCceeEEEE-EEecCC---eEEEEeeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 35777999999999999999 444433 57999999 89999999966556699999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
|+||||+||+++.++.++|+|||.+.......
T Consensus 126 h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~------------------------------------------------ 157 (280)
T cd06611 126 HRDLKAGNILLTLDGDVKLADFGVSAKNKSTL------------------------------------------------ 157 (280)
T ss_pred cCCCChhhEEECCCCCEEEccCccchhhcccc------------------------------------------------
Confidence 99999999999999999999888763211000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCcccc-----CCCCCccccchhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-----GAPVSCASDIYRLG 298 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~-----~~~~s~~sDIwSLG 298 (720)
.......|++.|+|||++. ...++.++||||||
T Consensus 158 ------------------------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG 195 (280)
T cd06611 158 ------------------------------------------QKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLG 195 (280)
T ss_pred ------------------------------------------cccceeecchhhcCHHHHhhcccCCCCCCccccHHHHH
Confidence 0001135789999999985 33478899999999
Q ss_pred hhhhhccc---cCCCCchHHHHHHHhhcCCCCc-cccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 299 VLLFELFC---PFSTGEEKTRTMSSLRHRVLPP-QLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~~p~-~~~~~~-p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|++|||++ ||...... ..+..+.....+. .....+ +...+|+.+||+.+|.+||++.++|+||||...
T Consensus 196 ~il~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~ 268 (280)
T cd06611 196 ITLIELAQMEPPHHELNPM-RVLLKILKSEPPTLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKHPFVSDQ 268 (280)
T ss_pred HHHHHHHhCCCCcccCCHH-HHHHHHhcCCCCCcCCcccCCHHHHHHHHHHhccChhhCcCHHHHhcChhhccc
Confidence 99999999 55544333 3333333332221 112233 345599999999999999999999999999886
No 144
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.97 E-value=6.9e-30 Score=266.45 Aligned_cols=204 Identities=18% Similarity=0.250 Sum_probs=155.9
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..++..++||||+++++ .+.... .+|++||| .+++|.+++...+ .+++.+++.++.||+.||.|||++||+
T Consensus 54 ~~e~~~~~~l~h~~ii~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~i~ 128 (267)
T cd06645 54 QQEIIMMKDCKHSNIVAYFG-SYLRRD---KLWICMEFCGGGSLQDIYHVTG-PLSESQIAYVSRETLQGLYYLHSKGKM 128 (267)
T ss_pred HHHHHHHHhCCCCCeeeEEE-EEEeCC---EEEEEEeccCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 35777899999999999999 444433 57999999 8899999985544 499999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
|+||||+||+++.++.++|+|||.+........
T Consensus 129 H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~----------------------------------------------- 161 (267)
T cd06645 129 HRDIKGANILLTDNGHVKLADFGVSAQITATIA----------------------------------------------- 161 (267)
T ss_pred cCCCCHHHEEECCCCCEEECcceeeeEccCccc-----------------------------------------------
Confidence 999999999999999999999988733211000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCcccc---CCCCCccccchhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA---GAPVSCASDIYRLGVL 300 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~---~~~~s~~sDIwSLGvl 300 (720)
......|++.|+|||.+. ...++.++|||||||+
T Consensus 162 -------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~i 198 (267)
T cd06645 162 -------------------------------------------KRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGIT 198 (267)
T ss_pred -------------------------------------------ccccccCcccccChhhhccccCCCCCchhhhHHHHHH
Confidence 000136789999999984 4448899999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCccccc--cCc-hHHHHHHHcCCCCCCCCCChHHHHcCcc
Q 004998 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL--KFP-KEASFCLWLLHPEPSGRPKMGELLQSEF 363 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~--~~p-~~~~li~~~L~~dP~~Rpta~eiL~hp~ 363 (720)
+|+|++ ||..................++.+.. .++ ...+|+.+||..+|++||++.++++|||
T Consensus 199 l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~~~ 267 (267)
T cd06645 199 AIELAELQPPMFDLHPMRALFLMTKSNFQPPKLKDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQHPF 267 (267)
T ss_pred HHHHhcCCCCcccccchhhHHhhhccCCCCCcccccCCCCHHHHHHHHHHccCCchhCcCHHHHhcCCC
Confidence 999999 55443332222222222222322221 233 3459999999999999999999999998
No 145
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.96 E-value=4.8e-30 Score=266.86 Aligned_cols=208 Identities=17% Similarity=0.204 Sum_probs=162.5
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
...|..++..++||||+++++ .+.++. .+|++||| .+++|.+++.+.. .+++..+..++.||+.||.|||++|+
T Consensus 40 ~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~~i~~~l~~lH~~~~ 114 (262)
T cd05572 40 IFSEKEILEECNHPFIVKLYR-TFKDKK---YIYMLMEYCLGGELWTILRDRG-LFDEYTARFYIACVVLAFEYLHNRGI 114 (262)
T ss_pred HHHHHHHHHhCCCCCEeeeee-eEEcCC---ccEEEEecCCCCcHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHhhCCc
Confidence 336677899999999999999 554443 57999999 8999999995543 48999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+|+||||+||+++.++.++|+|||.+.......
T Consensus 115 ~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~----------------------------------------------- 147 (262)
T cd05572 115 IYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ----------------------------------------------- 147 (262)
T ss_pred ccCCCCHHHEEEcCCCCEEEeeCCcccccCccc-----------------------------------------------
Confidence 999999999999999999999988773321100
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......|++.|+|||.+.+..++.++|+|||||++|
T Consensus 148 --------------------------------------------~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~ 183 (262)
T cd05572 148 --------------------------------------------KTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLY 183 (262)
T ss_pred --------------------------------------------ccccccCCcCccChhHhcCCCCCChhhhhhhHHHHH
Confidence 000135788999999998888999999999999999
Q ss_pred hccc---cCCCCc-hHHHHHHHhhcCCCCcccccc-CchHHHHHHHcCCCCCCCCCC-----hHHHHcCcccCCC
Q 004998 303 ELFC---PFSTGE-EKTRTMSSLRHRVLPPQLLLK-FPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEP 367 (720)
Q Consensus 303 eLlt---pf~~~~-~~~~~~~~l~~~~~p~~~~~~-~p~~~~li~~~L~~dP~~Rpt-----a~eiL~hp~~~~~ 367 (720)
+|++ ||.... .....+..+..+......+.. .+...+|+.+||..+|.+||+ +.|+++||||+..
T Consensus 184 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~ 258 (262)
T cd05572 184 ELLTGRPPFGEDDEDPMEIYNDILKGNGKLEFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKHKWFNGF 258 (262)
T ss_pred HHHhCCCCcCCCCCCHHHHHHHHhccCCCCCCCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhcChhhhCC
Confidence 9999 665544 122333333322222222222 345569999999999999999 9999999999864
No 146
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=99.96 E-value=3.2e-30 Score=278.90 Aligned_cols=222 Identities=16% Similarity=0.194 Sum_probs=162.2
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..+|..+|.+++||||+++++.+.........+|++|||.+++|.+++.... .+++..++.++.||+.||.|||++||+
T Consensus 51 ~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~iv 129 (334)
T cd07855 51 TLRELKILRHFKHDNIIAIRDILRPPGADFKDVYVVMDLMESDLHHIIHSDQ-PLTEEHIRYFLYQLLRGLKYIHSANVI 129 (334)
T ss_pred HHHHHHHHHhcCCCCccCHHHhccccCCCCceEEEEEehhhhhHHHHhccCC-CCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 3467889999999999999994433333445789999996679999995443 499999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+||+++.++.+||+|||.+......... .
T Consensus 130 H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~-------------------------------~-------------- 164 (334)
T cd07855 130 HRDLKPSNLLVNEDCELRIGDFGMARGLSSSPTE-------------------------------H-------------- 164 (334)
T ss_pred cCCCCHHHEEEcCCCcEEecccccceeecccCcC-------------------------------C--------------
Confidence 9999999999999999999999887432111000 0
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-CCCCccccchhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLF 302 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sDIwSLGvll~ 302 (720)
.......+|+.+|+|||.+.+ ..++.++|||||||++|
T Consensus 165 -----------------------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~ 203 (334)
T cd07855 165 -----------------------------------------KYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFA 203 (334)
T ss_pred -----------------------------------------CcccccccccccccChHHhcCCcccccccchHHHHHHHH
Confidence 000011467899999999866 34899999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhc-CC--------------------CC---c----cc-cccCchHHHHHHHcCCCCCC
Q 004998 303 ELFC---PFSTGEEKTRTMSSLRH-RV--------------------LP---P----QL-LLKFPKEASFCLWLLHPEPS 350 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~-~~--------------------~p---~----~~-~~~~p~~~~li~~~L~~dP~ 350 (720)
||++ ||............... +. ++ + .+ ....+...+||.+||+.+|.
T Consensus 204 el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~ 283 (334)
T cd07855 204 EMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPE 283 (334)
T ss_pred HHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChh
Confidence 9998 56543322111100000 00 00 0 00 11234445999999999999
Q ss_pred CCCChHHHHcCcccCCCccchH
Q 004998 351 GRPKMGELLQSEFLNEPRDSME 372 (720)
Q Consensus 351 ~Rpta~eiL~hp~~~~~~~~l~ 372 (720)
+||++.++++||||.+...+..
T Consensus 284 ~Rpt~~~~l~~~~~~~~~~~~~ 305 (334)
T cd07855 284 ERITVEQALQHPFLAQYHDPDD 305 (334)
T ss_pred hCcCHHHHHhChhhhhccCCcc
Confidence 9999999999999988755443
No 147
>PHA03210 serine/threonine kinase US3; Provisional
Probab=99.96 E-value=4.6e-30 Score=292.42 Aligned_cols=210 Identities=15% Similarity=0.139 Sum_probs=155.1
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCC----CCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP----KRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~----~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
++|+.+|.+++|||||++++ ++.... ..|+++|+.+++|.+++... .......+++.|+.||+.||.|||++
T Consensus 211 ~~Ei~il~~l~HpnIv~l~~-~~~~~~---~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~ 286 (501)
T PHA03210 211 ENEILALGRLNHENILKIEE-ILRSEA---NTYMITQKYDFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDK 286 (501)
T ss_pred HHHHHHHHhCCCCCcCcEeE-EEEECC---eeEEEEeccccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhC
Confidence 47888999999999999999 555544 56899999778899888332 12234677889999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004998 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
|||||||||+|||++.++.+||+|||++..+......
T Consensus 287 gIiHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~------------------------------------------- 323 (501)
T PHA03210 287 KLIHRDIKLENIFLNCDGKIVLGDFGTAMPFEKEREA------------------------------------------- 323 (501)
T ss_pred CeecCCCCHHHEEECCCCCEEEEeCCCceecCccccc-------------------------------------------
Confidence 9999999999999999999999999988443211000
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhh
Q 004998 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
.....+||+.|+|||++.+..++.++|||||||+
T Consensus 324 ----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvi 357 (501)
T PHA03210 324 ----------------------------------------------FDYGWVGTVATNSPEILAGDGYCEITDIWSCGLI 357 (501)
T ss_pred ----------------------------------------------ccccccCCcCCCCchhhcCCCCCcHHHHHHHHHH
Confidence 0011468999999999999889999999999999
Q ss_pred hhhccc----cCCCC--chHHHHHHHhhc-----CCCCc-----------------------ccc--ccCchHHHHHHHc
Q 004998 301 LFELFC----PFSTG--EEKTRTMSSLRH-----RVLPP-----------------------QLL--LKFPKEASFCLWL 344 (720)
Q Consensus 301 l~eLlt----pf~~~--~~~~~~~~~l~~-----~~~p~-----------------------~~~--~~~p~~~~li~~~ 344 (720)
+|||++ ||... .........+.. ..+|. .+. ...++..++|.+|
T Consensus 358 l~ell~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~km 437 (501)
T PHA03210 358 LLDMLSHDFCPIGDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKM 437 (501)
T ss_pred HHHHHHCCCCCccCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHH
Confidence 999998 33221 111122221111 00110 000 0112334789999
Q ss_pred CCCCCCCCCChHHHHcCcccCCC
Q 004998 345 LHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 345 L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|++||.+|||+.|+|+||||...
T Consensus 438 L~~DP~~Rpsa~elL~hp~f~~~ 460 (501)
T PHA03210 438 LTFDWHLRPGAAELLALPLFSAE 460 (501)
T ss_pred hccCcccCcCHHHHhhChhhhcC
Confidence 99999999999999999999875
No 148
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=99.96 E-value=9.5e-30 Score=263.08 Aligned_cols=204 Identities=16% Similarity=0.200 Sum_probs=158.0
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|..++++++||||+++++ .+... ..+|+++|| .+++|.+++......+++..++.++.||+.||.|||+.||+|
T Consensus 47 ~e~~~~~~l~~~~i~~~~~-~~~~~---~~~~l~~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H 122 (256)
T cd06612 47 KEISILKQCDSPYIVKYYG-SYFKN---TDLWIVMEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIH 122 (256)
T ss_pred HHHHHHHhCCCCcEeeeee-eeecC---CcEEEEEecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 5667889999999999999 44444 368999999 889999999665667999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
+||+|+||+++.++.++|+|||.+........
T Consensus 123 ~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~------------------------------------------------ 154 (256)
T cd06612 123 RDIKAGNILLNEEGQAKLADFGVSGQLTDTMA------------------------------------------------ 154 (256)
T ss_pred CCCCcceEEECCCCcEEEcccccchhcccCcc------------------------------------------------
Confidence 99999999999999999999888733211000
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhc
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 304 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eL 304 (720)
......|+..|+|||.+.+..++.++|||||||++|+|
T Consensus 155 ------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l 192 (256)
T cd06612 155 ------------------------------------------KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEM 192 (256)
T ss_pred ------------------------------------------ccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHH
Confidence 00013568889999999888899999999999999999
Q ss_pred cc---cCCCCchHHHHHHHhhcCCCCc-cccccC-chHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004998 305 FC---PFSTGEEKTRTMSSLRHRVLPP-QLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 305 lt---pf~~~~~~~~~~~~l~~~~~p~-~~~~~~-p~~~~li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
++ ||......... ..+.....+. .....+ +...+|+.+||+.+|.+|||+.|+|+||||
T Consensus 193 ~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~~~~ 256 (256)
T cd06612 193 AEGKPPYSDIHPMRAI-FMIPNKPPPTLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQHPFI 256 (256)
T ss_pred HhCCCCCCCcchhhhh-hhhccCCCCCCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhcCCCC
Confidence 99 55543332222 1221111111 111122 344599999999999999999999999997
No 149
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.96 E-value=1.4e-29 Score=265.82 Aligned_cols=204 Identities=18% Similarity=0.290 Sum_probs=151.8
Q ss_pred ehhhhcccCC-CCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l~-HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
+|..++.++. ||||+++++ ++.+... ..++++|||.+++|.+++......+++.+++.++.||+.||.|||+.||+|
T Consensus 46 ~e~~~l~~l~~h~~i~~~~~-~~~~~~~-~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H 123 (282)
T cd07831 46 REIQALRRLSPHPNILRLIE-VLFDRKT-GRLALVFELMDMNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFH 123 (282)
T ss_pred HHHHHHhhcCCCCCccceEE-EEecCCC-CcEEEEEecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcee
Confidence 5666777775 999999999 4544422 257999999667999999654456899999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+||+++. +.++|+|||.+....... .+
T Consensus 124 ~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~---------------------------------~~-------------- 155 (282)
T cd07831 124 RDIKPENILIKD-DILKLADFGSCRGIYSKP---------------------------------PY-------------- 155 (282)
T ss_pred cccCHHHEEEcC-CCeEEEecccccccccCC---------------------------------Cc--------------
Confidence 999999999999 999999998874321100 00
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-CCCCccccchhhhhhhhh
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLFE 303 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sDIwSLGvll~e 303 (720)
....+++.|+|||++.. ..++.++|||||||++||
T Consensus 156 --------------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~e 191 (282)
T cd07831 156 --------------------------------------------TEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFE 191 (282)
T ss_pred --------------------------------------------CCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHH
Confidence 01356889999998754 447899999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhc--------------------CCCCcc-------cccc-CchHHHHHHHcCCCCCCCC
Q 004998 304 LFC---PFSTGEEKTRTMSSLRH--------------------RVLPPQ-------LLLK-FPKEASFCLWLLHPEPSGR 352 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~--------------------~~~p~~-------~~~~-~p~~~~li~~~L~~dP~~R 352 (720)
|++ ||...+.... ...+.. ...++. +... .....+||.+||+++|++|
T Consensus 192 l~~~~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R 270 (282)
T cd07831 192 ILSLFPLFPGTNELDQ-IAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDER 270 (282)
T ss_pred HHcCCcCCCCCCHHHH-HHHHHHHcCCCCHHHHHhhcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccc
Confidence 998 6654433211 111110 001110 0111 2344599999999999999
Q ss_pred CChHHHHcCccc
Q 004998 353 PKMGELLQSEFL 364 (720)
Q Consensus 353 pta~eiL~hp~~ 364 (720)
|++.++++||||
T Consensus 271 ~~~~~~l~~~~~ 282 (282)
T cd07831 271 ITAKQALRHPYF 282 (282)
T ss_pred cCHHHHhhCCCC
Confidence 999999999997
No 150
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=99.96 E-value=4.9e-30 Score=276.28 Aligned_cols=205 Identities=18% Similarity=0.235 Sum_probs=156.4
Q ss_pred ehhhhcccCC-CCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 66 SDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~Ls~l~-HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.|..++..+. ||+|+++++ ++.... .+|+|||| .|++|.+++...+ .+++.+++.++.||+.||.|||++||+
T Consensus 49 ~e~~~l~~~~~~~~i~~~~~-~~~~~~---~~~lv~Ey~~~g~L~~~i~~~~-~l~~~~~~~i~~qi~~al~~lH~~~iv 123 (323)
T cd05615 49 VEKRVLALQDKPPFLTQLHS-CFQTVD---RLYFVMEYVNGGDLMYHIQQVG-KFKEPQAVFYAAEISVGLFFLHRRGII 123 (323)
T ss_pred HHHHHHHhccCCCchhheee-EEecCC---EEEEEEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 4555666665 566777887 555543 58999999 8999999995544 499999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.++|+|||++........
T Consensus 124 HrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~~----------------------------------------------- 156 (323)
T cd05615 124 YRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGV----------------------------------------------- 156 (323)
T ss_pred ccCCCHHHeEECCCCCEEEeccccccccCCCCc-----------------------------------------------
Confidence 999999999999999999999988732110000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......||+.|+|||++.+..++.++|||||||++||
T Consensus 157 -------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~e 193 (323)
T cd05615 157 -------------------------------------------TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYE 193 (323)
T ss_pred -------------------------------------------cccCccCCccccCHHHHcCCCCCCccchhhhHHHHHH
Confidence 0001368999999999998889999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCC-----hHHHHcCcccCCC
Q 004998 304 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpt-----a~eiL~hp~~~~~ 367 (720)
|++ ||...... .....+...... ......+...+|+.+||+.+|.+|++ ..++++||||...
T Consensus 194 lltG~~pf~~~~~~-~~~~~i~~~~~~-~p~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~f~~~ 263 (323)
T cd05615 194 MLAGQPPFDGEDED-ELFQSIMEHNVS-YPKSLSKEAVSICKGLMTKHPSKRLGCGPEGERDIREHAFFRRI 263 (323)
T ss_pred HHhCCCCCCCCCHH-HHHHHHHhCCCC-CCccCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcCcccCCC
Confidence 999 66655443 233333322211 11122344569999999999999997 4789999999875
No 151
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=99.96 E-value=7.4e-30 Score=269.67 Aligned_cols=207 Identities=18% Similarity=0.252 Sum_probs=160.2
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
.+|..+|.+++|+||+.+++ .+..+. .+|++||| .+++|.+++.. ....+++..+..++.||+.||.|||+.||
T Consensus 48 ~~E~~il~~l~~~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i 123 (285)
T cd05632 48 LNEKQILEKVNSQFVVNLAY-AYETKD---ALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENT 123 (285)
T ss_pred HHHHHHHHHcCCcCceeEEE-EEecCC---EEEEEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 35778999999999999988 444433 67999999 88999998843 33459999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.++|+|||++.......
T Consensus 124 iH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~----------------------------------------------- 156 (285)
T cd05632 124 VYRDLKPENILLDDYGHIRISDLGLAVKIPEGE----------------------------------------------- 156 (285)
T ss_pred eecCCCHHHEEECCCCCEEEecCCcceecCCCC-----------------------------------------------
Confidence 999999999999999999999998763210000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......|++.|+|||.+.+..++.++|||||||++|
T Consensus 157 --------------------------------------------~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~ 192 (285)
T cd05632 157 --------------------------------------------SIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIY 192 (285)
T ss_pred --------------------------------------------cccCCCCCcCccChHHhcCCCCCcccchHHHHHHHH
Confidence 000136799999999998888999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCCC--CccccccC-chHHHHHHHcCCCCCCCCCC-----hHHHHcCcccCCC
Q 004998 303 ELFC---PFSTGEEKTRTMSSLRHRVL--PPQLLLKF-PKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEP 367 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~~~--p~~~~~~~-p~~~~li~~~L~~dP~~Rpt-----a~eiL~hp~~~~~ 367 (720)
||++ ||........ ...+..... ...+.... +...+|+.+||..||++||+ +.++++|+||...
T Consensus 193 ~l~~g~~P~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~ 267 (285)
T cd05632 193 EMIEGQSPFRGRKEKVK-REEVDRRVLETEEVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHPFFRNM 267 (285)
T ss_pred HHHhCCCCCCCCCHHHH-HHHHHHhhhccccccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcChhhhcC
Confidence 9999 6655433211 111111111 11222233 34569999999999999999 8899999999987
No 152
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.96 E-value=1e-29 Score=270.24 Aligned_cols=208 Identities=15% Similarity=0.193 Sum_probs=161.3
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
+|..++..++||||+++++ .+..+. ..|+|||| .|++|.+++... .+++.++..++.||+.||.|||+.||+|
T Consensus 66 ~e~~~l~~~~h~~v~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~i~~ql~~aL~~LH~~gi~H 139 (296)
T cd06654 66 NEILVMRENKNPNIVNYLD-SYLVGD---ELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSNQVIH 139 (296)
T ss_pred HHHHHHHhCCCCCEeeEEE-EEEeCC---EEEEeecccCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 5677889999999999999 444433 68999999 899999998543 3899999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+||+++.++.++|+|||.+....... .
T Consensus 140 ~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~---------------------------------~--------------- 171 (296)
T cd06654 140 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQ---------------------------------S--------------- 171 (296)
T ss_pred CCCCHHHEEEcCCCCEEECccccchhccccc---------------------------------c---------------
Confidence 9999999999999999999988763211000 0
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhc
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 304 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eL 304 (720)
......|++.|+|||.+.+..++.++|||||||++|+|
T Consensus 172 ------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l 209 (296)
T cd06654 172 ------------------------------------------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEM 209 (296)
T ss_pred ------------------------------------------ccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHH
Confidence 00013578899999999888899999999999999999
Q ss_pred cc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004998 305 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 305 lt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
++ ||..................+....... +...+|+.+||.++|.+||++.++++||||.....
T Consensus 210 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~~~~~~~~~ 278 (296)
T cd06654 210 IEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIAKP 278 (296)
T ss_pred HhCCCCCCCCCHHHhHHHHhcCCCCCCCCccccCHHHHHHHHHHCcCCcccCcCHHHHhhChhhhccCC
Confidence 99 6655444333222222222221222223 34559999999999999999999999999987633
No 153
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=99.96 E-value=8.9e-30 Score=263.97 Aligned_cols=209 Identities=20% Similarity=0.294 Sum_probs=163.1
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC---CCCCCCHHHHHHHHHHHHHHHHHHH
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~---~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
+...|..+++.++||||+++++.+. ... ...+|++||| .+++|.+++.. ....+++..++.++.||+.||.|||
T Consensus 45 ~~~~e~~~l~~l~~~~i~~~~~~~~-~~~-~~~~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH 122 (265)
T cd08217 45 QLVSEVNILRELKHPNIVRYYDRII-DRS-NQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECH 122 (265)
T ss_pred HHHHHHHHHHhcCCCccceeeeeee-cCC-CCEEEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHh
Confidence 3346778899999999999999333 222 2357999999 89999999943 2456899999999999999999999
Q ss_pred -----HcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccc
Q 004998 139 -----SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLV 213 (720)
Q Consensus 139 -----s~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla 213 (720)
+.+|+|+||||+||+++.++.++|+|||.+....... .+
T Consensus 123 ~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~~~~~---------------------------------~~--- 166 (265)
T cd08217 123 NRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGHDS---------------------------------SF--- 166 (265)
T ss_pred cCccccCcceecCCCHHHEEEecCCCEEEecccccccccCCc---------------------------------cc---
Confidence 9999999999999999999999999998874332110 00
Q ss_pred cCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCcccc
Q 004998 214 TAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASD 293 (720)
Q Consensus 214 ~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sD 293 (720)
.....|++.|+|||.+.+..++.++|
T Consensus 167 ------------------------------------------------------~~~~~~~~~~~~pE~~~~~~~~~~~D 192 (265)
T cd08217 167 ------------------------------------------------------AKTYVGTPYYMSPEQLNHMSYDEKSD 192 (265)
T ss_pred ------------------------------------------------------ccccccCCCccChhhhcCCCCCchhH
Confidence 00135788999999998888999999
Q ss_pred chhhhhhhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004998 294 IYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 294 IwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
+||||+++|+|++ ||.... .......+..+..++......+...+|+.+||..+|.+||++.+|++|||+
T Consensus 193 v~slG~il~~l~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~~~~ 265 (265)
T cd08217 193 IWSLGCLIYELCALSPPFTARN-QLQLASKIKEGKFRRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQLPLI 265 (265)
T ss_pred HHHHHHHHHHHHHCCCcccCcC-HHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCCcccCCCHHHHhhCCCC
Confidence 9999999999999 565543 234444455444433322233445599999999999999999999999996
No 154
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=99.96 E-value=2.5e-30 Score=270.98 Aligned_cols=208 Identities=20% Similarity=0.258 Sum_probs=166.3
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.|..+|..++.|.||.+-. .|+..+ .+|+||.. .||+|.-+|-+ ..+.+++..++.|+.+|+.||.+||..+||
T Consensus 234 nEk~iL~kV~s~FiVslaY-AfeTkd---~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iV 309 (591)
T KOG0986|consen 234 NEKQILEKVSSPFIVSLAY-AFETKD---ALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIV 309 (591)
T ss_pred HHHHHHHHhccCcEEEEee-eecCCC---ceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhccee
Confidence 6788999999999999977 666665 56999999 99999988844 345699999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
.|||||+|||+++.|+|+|+|+|+|.++....
T Consensus 310 YRDLKPeNILLDd~GhvRISDLGLAvei~~g~------------------------------------------------ 341 (591)
T KOG0986|consen 310 YRDLKPENILLDDHGHVRISDLGLAVEIPEGK------------------------------------------------ 341 (591)
T ss_pred eccCChhheeeccCCCeEeeccceEEecCCCC------------------------------------------------
Confidence 99999999999999999999999985431110
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
|. ...+||.+|||||++.+..|+.+.|+|||||+|||
T Consensus 342 -----------------------------------------~~--~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYe 378 (591)
T KOG0986|consen 342 -----------------------------------------PI--RGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYE 378 (591)
T ss_pred -----------------------------------------cc--ccccCcccccCHHHHcCCcccCCccHHHHHhHHHH
Confidence 00 11489999999999999999999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCC--CCccccccCchHH-HHHHHcCCCCCCCCC-----ChHHHHcCcccCCCcc
Q 004998 304 LFC---PFSTGEEKTRTMSSLRHRV--LPPQLLLKFPKEA-SFCLWLLHPEPSGRP-----KMGELLQSEFLNEPRD 369 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~~--~p~~~~~~~p~~~-~li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~~~ 369 (720)
|+. ||....+.. -...+.+++ -+..+....++++ +||..+|+.||++|. .+.++.+||||+...-
T Consensus 379 mi~G~sPFr~~KeKv-k~eEvdrr~~~~~~ey~~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~lnw 454 (591)
T KOG0986|consen 379 MIAGHSPFRQRKEKV-KREEVDRRTLEDPEEYSDKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEHPFFKDLNW 454 (591)
T ss_pred HHcccCchhhhhhhh-hHHHHHHHHhcchhhcccccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhCcccccCCH
Confidence 998 665443321 111222222 2334445555555 999999999999996 6889999999998733
No 155
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.96 E-value=1.6e-29 Score=270.07 Aligned_cols=214 Identities=18% Similarity=0.208 Sum_probs=160.2
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.+|..++.+++||||+++++ ++.... ...+++||||.+++|.+++......+++.+++.++.||+.||.|||+.|++|
T Consensus 54 ~~E~~~l~~l~h~~i~~~~~-~~~~~~-~~~~~lv~e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H 131 (309)
T cd07845 54 LREITLLLNLRHPNIVELKE-VVVGKH-LDSIFLVMEYCEQDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFIIH 131 (309)
T ss_pred hHHHHHHHhCCCCCCcceEE-EEecCC-CCeEEEEEecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 36788999999999999999 443322 2357999999777999999655566999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+||+++.++.++|+|||.+...+....
T Consensus 132 ~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~~------------------------------------------------ 163 (309)
T cd07845 132 RDLKVSNLLLTDKGCLKIADFGLARTYGLPAK------------------------------------------------ 163 (309)
T ss_pred CCCCHHHEEECCCCCEEECccceeeecCCccC------------------------------------------------
Confidence 99999999999999999999988743321100
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-CCCccccchhhhhhhhh
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFE 303 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGvll~e 303 (720)
......+++.|+|||.+.+. .++.++|||||||++||
T Consensus 164 ------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~e 201 (309)
T cd07845 164 ------------------------------------------PMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAE 201 (309)
T ss_pred ------------------------------------------CCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHH
Confidence 00012457889999998764 48999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcC--------------------CCCcc--------ccccCchHHHHHHHcCCCCCCCC
Q 004998 304 LFC---PFSTGEEKTRTMSSLRHR--------------------VLPPQ--------LLLKFPKEASFCLWLLHPEPSGR 352 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~--------------------~~p~~--------~~~~~p~~~~li~~~L~~dP~~R 352 (720)
|++ ||................ .++.. +....+...+||.+||++||++|
T Consensus 202 l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R 281 (309)
T cd07845 202 LLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKR 281 (309)
T ss_pred HHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhC
Confidence 999 555443332221111100 00000 01123445699999999999999
Q ss_pred CChHHHHcCcccCCCccc
Q 004998 353 PKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 353 pta~eiL~hp~~~~~~~~ 370 (720)
||+.++|+||||.....+
T Consensus 282 ~t~~~il~h~~f~~~~~~ 299 (309)
T cd07845 282 ATAEEALESSYFKEKPLP 299 (309)
T ss_pred cCHHHHhcChhhccCCCC
Confidence 999999999999876443
No 156
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=99.96 E-value=1.2e-29 Score=262.43 Aligned_cols=206 Identities=20% Similarity=0.274 Sum_probs=159.3
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+...|..+|++++||||+++++. +..+. .++++||| .+++|.+++... ...+++..++.++.|++.||.|||++
T Consensus 45 ~~~~e~~~l~~~~~~~i~~~~~~-~~~~~---~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~ 120 (256)
T cd08220 45 AAQNECQVLKLLSHPNIIEYYEN-FLEDK---ALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTK 120 (256)
T ss_pred HHHHHHHHHhhCCCCchhheeee-EecCC---EEEEEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 34467789999999999999994 43332 57999999 899999999543 44589999999999999999999999
Q ss_pred CceeccCCCCcEEEccCC-ceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004998 141 GIVVHNVRPSCFVMSSFN-HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~-~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
||+|+||||+||+++.++ .++++|||.+...+...
T Consensus 121 ~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~-------------------------------------------- 156 (256)
T cd08220 121 LILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKS-------------------------------------------- 156 (256)
T ss_pred CeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCc--------------------------------------------
Confidence 999999999999998554 57998888773321110
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhh
Q 004998 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
......|++.|+|||.+.+..++.++|||||||
T Consensus 157 -----------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~ 189 (256)
T cd08220 157 -----------------------------------------------KAYTVVGTPCYISPELCEGKPYNQKSDIWALGC 189 (256)
T ss_pred -----------------------------------------------cccccccCCcccCchhccCCCCCcccchHHHHH
Confidence 000135788999999999888999999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004998 300 LLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
++|+|++ ||............ .....++......+...+|+.+||+++|.+|||+.|+++||||
T Consensus 190 ~l~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~p~~ 256 (256)
T cd08220 190 VLYELASLKRAFEAANLPALVLKI-MSGTFAPISDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQPIC 256 (256)
T ss_pred HHHHHHhCCCCcccCchHHHHHHH-HhcCCCCCCCCcCHHHHHHHHHHccCChhhCCCHHHHhhCCCC
Confidence 9999998 66655444333332 2222222222234556699999999999999999999999997
No 157
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=99.96 E-value=8.5e-30 Score=277.77 Aligned_cols=210 Identities=19% Similarity=0.208 Sum_probs=156.7
Q ss_pred eehhhhcccCCCCCceecccceeecCC---CCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEA---AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~---~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
.+|..++..++||||+++++ ++.... .....|+||||.+++|.+++... +++..+..++.||+.||.|||++|
T Consensus 63 ~~E~~~l~~l~h~~iv~~~~-~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~---l~~~~~~~~~~ql~~aL~~LH~~g 138 (353)
T cd07850 63 YRELVLMKLVNHKNIIGLLN-VFTPQKSLEEFQDVYLVMELMDANLCQVIQMD---LDHERMSYLLYQMLCGIKHLHSAG 138 (353)
T ss_pred HHHHHHHHhcCCCCCcceee-eeccCCCccccCcEEEEEeccCCCHHHHHhhc---CCHHHHHHHHHHHHHHHHHHHhCC
Confidence 36788999999999999999 443322 22357999999777999988432 899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++.++|+|||.+...+...
T Consensus 139 i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~---------------------------------------------- 172 (353)
T cd07850 139 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF---------------------------------------------- 172 (353)
T ss_pred eeeCCCCHHHEEECCCCCEEEccCccceeCCCCC----------------------------------------------
Confidence 9999999999999999999999988873321100
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......+++.|+|||.+.+..++.++|||||||++
T Consensus 173 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l 207 (353)
T cd07850 173 ---------------------------------------------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIM 207 (353)
T ss_pred ---------------------------------------------CCCCCcccccccCHHHHhCCCCCCchhhHhHHHHH
Confidence 00013568899999999998899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCC--------------------------------Cccc--------cccCc-hH
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRHRVL--------------------------------PPQL--------LLKFP-KE 337 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~--------------------------------p~~~--------~~~~p-~~ 337 (720)
|+|++ ||...+........+..... +... ....+ ..
T Consensus 208 ~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (353)
T cd07850 208 GEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQA 287 (353)
T ss_pred HHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHH
Confidence 99998 56544322111111100000 0000 00112 24
Q ss_pred HHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004998 338 ASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 338 ~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
.+||.+||++||++|||+.|+|+||||.....
T Consensus 288 ~~li~~~L~~dP~~R~t~~eiL~~~~~~~~~~ 319 (353)
T cd07850 288 RDLLSKMLVIDPEKRISVDDALQHPYINVWYD 319 (353)
T ss_pred HHHHHHHcCCChhhCcCHHHHhcChhHhhccC
Confidence 59999999999999999999999999875433
No 158
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=99.96 E-value=1.4e-29 Score=266.38 Aligned_cols=209 Identities=19% Similarity=0.254 Sum_probs=157.2
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..+|..++.+++||||+++++ ++..+. .+|+||||.+++|.+++......+++.+++.++.||+.||.|||+.||+
T Consensus 46 ~~~e~~~l~~~~~~~i~~~~~-~~~~~~---~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~ 121 (286)
T cd07832 46 ALREIKALQACQHPYVVKLLD-VFPHGS---GFVLVMEYMPSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIM 121 (286)
T ss_pred HHHHHHHHHhCCCCCCcceee-EEecCC---eeEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 346777999999999999999 454433 6799999999999999966556699999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
|+||||+||+++.++.++++|||.+........
T Consensus 122 H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~----------------------------------------------- 154 (286)
T cd07832 122 HRDLKPANLLISADGVLKIADFGLARLFSEEEP----------------------------------------------- 154 (286)
T ss_pred cCCcCHHHEEEcCCCcEEEeeeeecccccCCCC-----------------------------------------------
Confidence 999999999999999999999988743211100
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC-CCccccchhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLF 302 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGvll~ 302 (720)
.......|+.+|+|||.+.+.. ++.++|||||||++|
T Consensus 155 ------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~ 192 (286)
T cd07832 155 ------------------------------------------RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFA 192 (286)
T ss_pred ------------------------------------------CccccccCcccccCceeeeccccCCchhHHHHHHHHHH
Confidence 0000135789999999987654 689999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcC--------------------CCCc-------cc-cccCchHHHHHHHcCCCCCCC
Q 004998 303 ELFC---PFSTGEEKTRTMSSLRHR--------------------VLPP-------QL-LLKFPKEASFCLWLLHPEPSG 351 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~--------------------~~p~-------~~-~~~~p~~~~li~~~L~~dP~~ 351 (720)
||++ +|............+... ..+. .. ........+|+.+||.++|.+
T Consensus 193 ~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~ 272 (286)
T cd07832 193 ELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSK 272 (286)
T ss_pred HHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhh
Confidence 9999 343333221111111100 0000 00 111233459999999999999
Q ss_pred CCChHHHHcCcccC
Q 004998 352 RPKMGELLQSEFLN 365 (720)
Q Consensus 352 Rpta~eiL~hp~~~ 365 (720)
|||++++|+||||.
T Consensus 273 R~~~~~~l~h~~~~ 286 (286)
T cd07832 273 RLSAAEALRHPYFT 286 (286)
T ss_pred CCCHHHHhhCcCcC
Confidence 99999999999984
No 159
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.96 E-value=2.5e-30 Score=260.42 Aligned_cols=218 Identities=17% Similarity=0.234 Sum_probs=164.1
Q ss_pred eeeeehhhhccc-CCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004998 62 LRKHSDGVELTH-GDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 62 ~r~~~e~~~Ls~-l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
-|..||..++.+ -.|+||++|++ ||+++. .||+|||- .||+|...|.+... +++.++..++++|+.||+|||.
T Consensus 120 ~RvfREVe~f~~Cqgh~nilqLie-fFEdd~---~FYLVfEKm~GGplLshI~~~~~-F~E~EAs~vvkdia~aLdFlH~ 194 (463)
T KOG0607|consen 120 SRVFREVETFYQCQGHKNILQLIE-FFEDDT---RFYLVFEKMRGGPLLSHIQKRKH-FNEREASRVVKDIASALDFLHT 194 (463)
T ss_pred HHHHHHHHHHHHhcCCccHHHHHH-Hhcccc---eEEEEEecccCchHHHHHHHhhh-ccHHHHHHHHHHHHHHHHHHhh
Confidence 355577777777 56999999999 887775 68999999 99999999955443 9999999999999999999999
Q ss_pred cCceeccCCCCcEEEccCCc---eEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCC
Q 004998 140 QGIVVHNVRPSCFVMSSFNH---VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 216 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~---vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~ 216 (720)
+||.||||||+|||-...++ ||||||.+.+..... .|..++.+
T Consensus 195 kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~---------------------------------~~~spast- 240 (463)
T KOG0607|consen 195 KGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLN---------------------------------NDCSPAST- 240 (463)
T ss_pred cCcccccCCccceeecCCCCcCceeeeccccccccccC---------------------------------CCCCCCCC-
Confidence 99999999999999986654 788888665321000 11111100
Q ss_pred CCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCcccc---CC--CCCcc
Q 004998 217 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA---GA--PVSCA 291 (720)
Q Consensus 217 ~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~---~~--~~s~~ 291 (720)
| .-...+|+..|||||+.. +. .|+.+
T Consensus 241 ------------------------------------------------P-~L~tPvGSAEfMAPEVVd~fv~qA~~YDKr 271 (463)
T KOG0607|consen 241 ------------------------------------------------P-ELLTPVGSAEFMAPEVVDVFVDQATFYDKR 271 (463)
T ss_pred ------------------------------------------------c-cccCcccchhhcchhHHhhhcccccccccc
Confidence 0 012368999999999863 22 38999
Q ss_pred ccchhhhhhhhhccccCCCCc------------h-----HHHHHHHhhcC--CCCccccccCchHH-HHHHHcCCCCCCC
Q 004998 292 SDIYRLGVLLFELFCPFSTGE------------E-----KTRTMSSLRHR--VLPPQLLLKFPKEA-SFCLWLLHPEPSG 351 (720)
Q Consensus 292 sDIwSLGvll~eLltpf~~~~------------~-----~~~~~~~l~~~--~~p~~~~~~~p~~~-~li~~~L~~dP~~ 351 (720)
.|.||||||||-||++|.++. + ....+..|..+ .+|..-+..++.++ +++..+|..+|.+
T Consensus 272 CDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~ 351 (463)
T KOG0607|consen 272 CDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQ 351 (463)
T ss_pred ccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHh
Confidence 999999999999999443321 0 12334445543 45666555555555 9999999999999
Q ss_pred CCChHHHHcCcccCCC
Q 004998 352 RPKMGELLQSEFLNEP 367 (720)
Q Consensus 352 Rpta~eiL~hp~~~~~ 367 (720)
|.++.++++|||++..
T Consensus 352 rlsa~~vlnhPw~~~~ 367 (463)
T KOG0607|consen 352 RLSAAQVLNHPWVQRC 367 (463)
T ss_pred hhhhhhccCCcccccc
Confidence 9999999999999986
No 160
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=99.96 E-value=1.5e-29 Score=266.28 Aligned_cols=208 Identities=18% Similarity=0.243 Sum_probs=156.7
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+...|..++++++||||+++++ ++.+.. ..+++|||..++|..++.. ....+++..++.++.||+.||+|||+.|
T Consensus 45 ~~~~E~~~l~~l~h~~i~~~~~-~~~~~~---~~~~v~e~~~~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~ 120 (284)
T cd07860 45 TAIREISLLKELNHPNIVKLLD-VIHTEN---KLYLVFEFLHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHR 120 (284)
T ss_pred HHHHHHHHHHhcCCCCCcchhh-hcccCC---cEEEEeeccccCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3446788999999999999999 444433 5799999966789999843 3455899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
++|+||+|+||+++.++.++|+|||.+...+....
T Consensus 121 i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~--------------------------------------------- 155 (284)
T cd07860 121 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--------------------------------------------- 155 (284)
T ss_pred eecCCCCHHHEEECCCCCEEEeeccchhhcccCcc---------------------------------------------
Confidence 99999999999999999999999988743211100
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC-CCccccchhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVL 300 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGvl 300 (720)
......+++.|+|||++.+.. ++.++|||||||+
T Consensus 156 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~i 190 (284)
T cd07860 156 ---------------------------------------------TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCI 190 (284)
T ss_pred ---------------------------------------------ccccccccccccCCeEEecCCCCCcHHHHHHHHHH
Confidence 000124688999999987755 6889999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCc--------------------------c-ccccCchHHHHHHHcCCCCCC
Q 004998 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPP--------------------------Q-LLLKFPKEASFCLWLLHPEPS 350 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p~--------------------------~-~~~~~p~~~~li~~~L~~dP~ 350 (720)
+|||++ ||............+.....++ . .....+...+||.+||+.||.
T Consensus 191 l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~ 270 (284)
T cd07860 191 FAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPN 270 (284)
T ss_pred HHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcc
Confidence 999999 5655443322222221111100 0 011223445899999999999
Q ss_pred CCCChHHHHcCccc
Q 004998 351 GRPKMGELLQSEFL 364 (720)
Q Consensus 351 ~Rpta~eiL~hp~~ 364 (720)
+|||+++++.||||
T Consensus 271 ~Rpt~~~~l~~~~f 284 (284)
T cd07860 271 KRISAKAALAHPFF 284 (284)
T ss_pred cCCCHHHHhcCCCC
Confidence 99999999999998
No 161
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=99.96 E-value=9.1e-30 Score=280.00 Aligned_cols=204 Identities=15% Similarity=0.181 Sum_probs=154.5
Q ss_pred eehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC---------------------------
Q 004998 65 HSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK--------------------------- 115 (720)
Q Consensus 65 ~~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~--------------------------- 115 (720)
.+|..+|..+ +|||||++++ .+.... ..++|||| .||+|.+++....
T Consensus 86 ~~Ei~il~~l~~HpnIv~l~~-~~~~~~---~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (375)
T cd05104 86 MSELKVLSYLGNHINIVNLLG-ACTVGG---PTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMS 161 (375)
T ss_pred HHHHHHHHHhcCCcceeeeee-eeccCC---cceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhccc
Confidence 3678889888 8999999999 554443 57999999 9999999994321
Q ss_pred -----------------------------------------------CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCC
Q 004998 116 -----------------------------------------------RSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 148 (720)
Q Consensus 116 -----------------------------------------------~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLK 148 (720)
..+++..++.++.||+.||.|||++||+|||||
T Consensus 162 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlk 241 (375)
T cd05104 162 CDSLNEYMDMKPGVSYVVPTKADKRRSVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLA 241 (375)
T ss_pred chhhhhhhhcCCCcccccccccccccccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCc
Confidence 247888999999999999999999999999999
Q ss_pred CCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccC
Q 004998 149 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 228 (720)
Q Consensus 149 P~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~ 228 (720)
|+|||++.++.+||+|||++....... .+
T Consensus 242 p~Nill~~~~~~kl~DfG~a~~~~~~~---------------------------------~~------------------ 270 (375)
T cd05104 242 ARNILLTHGRITKICDFGLARDIRNDS---------------------------------NY------------------ 270 (375)
T ss_pred hhhEEEECCCcEEEecCccceeccCcc---------------------------------cc------------------
Confidence 999999999999999998874321110 00
Q ss_pred CCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhccc--
Q 004998 229 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 306 (720)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt-- 306 (720)
. ......++..|+|||++.+..++.++|||||||++|||++
T Consensus 271 ------------------~-------------------~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g 313 (375)
T cd05104 271 ------------------V-------------------VKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLG 313 (375)
T ss_pred ------------------c-------------------ccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcC
Confidence 0 0000234677999999999889999999999999999997
Q ss_pred --cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 307 --PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 307 --pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
||............+..+..+.......++..+|+.+||+.||++||++.||++
T Consensus 314 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 369 (375)
T cd05104 314 SSPYPGMPVDSKFYKMIKEGYRMLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQ 369 (375)
T ss_pred CCCCCCCCchHHHHHHHHhCccCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHH
Confidence 565543333344444433222221112234569999999999999999999986
No 162
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=99.96 E-value=1.5e-29 Score=266.18 Aligned_cols=206 Identities=18% Similarity=0.185 Sum_probs=157.9
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|..+|.+++||||+++++ .+.... .++++||| .+++|..+. .+++..+..++.||+.||.|||+.||+|
T Consensus 48 ~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~i~H 118 (279)
T cd06619 48 SELEILYKCDSPYIIGFYG-AFFVEN---RISICTEFMDGGSLDVYR-----KIPEHVLGRIAVAVVKGLTYLWSLKILH 118 (279)
T ss_pred HHHHHHHhCCCCCeeeEEE-EEEECC---EEEEEEecCCCCChHHhh-----cCCHHHHHHHHHHHHHHHHHHHHCCEee
Confidence 5677899999999999999 554443 57899999 888887643 3789999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
+||||+||+++.++.++|+|||++......
T Consensus 119 ~dlkp~Nill~~~~~~~l~dfg~~~~~~~~-------------------------------------------------- 148 (279)
T cd06619 119 RDVKPSNMLVNTRGQVKLCDFGVSTQLVNS-------------------------------------------------- 148 (279)
T ss_pred CCCCHHHEEECCCCCEEEeeCCcceecccc--------------------------------------------------
Confidence 999999999999999999999887322100
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhc
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 304 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eL 304 (720)
......||+.|+|||.+.+..++.++|||||||++|+|
T Consensus 149 ------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l 186 (279)
T cd06619 149 ------------------------------------------IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMEL 186 (279)
T ss_pred ------------------------------------------cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHH
Confidence 00013678999999999988899999999999999999
Q ss_pred cc---cCCCCch------HHHHHHHhhcCCCCccccc-cCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCccchH
Q 004998 305 FC---PFSTGEE------KTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSME 372 (720)
Q Consensus 305 lt---pf~~~~~------~~~~~~~l~~~~~p~~~~~-~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~~l~ 372 (720)
++ ||..... .......+.....+..... ..+...+|+.+||+.+|.+||+++|+++||||........
T Consensus 187 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~~~~~~~~~~~ 264 (279)
T cd06619 187 ALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQFSEKFVHFITQCMRKQPKERPAPENLMDHPFIVQYNDGNA 264 (279)
T ss_pred HhCCCCchhhcccccccchHHHHHHHhccCCCCCCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcCcccccccCccH
Confidence 99 5543211 1112222222222221122 2345569999999999999999999999999988744433
No 163
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=99.96 E-value=1.3e-29 Score=264.76 Aligned_cols=207 Identities=19% Similarity=0.218 Sum_probs=155.0
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCC--CHHHHHHHHHHHHHHHHHHHHc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSV--DVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l--~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
..+|..++.+++||||+++++ ++..+ ..+++++|| .+++|.+++......+ ++..+..++.||+.||.|||++
T Consensus 52 ~~~e~~~l~~l~h~~iv~~~~-~~~~~---~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~ 127 (268)
T cd06624 52 LHEEIALHSYLKHRNIVQYLG-SDSEN---GFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDN 127 (268)
T ss_pred HHHHHHHHHhcCCCCeeeeee-eeccC---CEEEEEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHC
Confidence 346778899999999999999 44443 268999999 8999999996543445 8899999999999999999999
Q ss_pred CceeccCCCCcEEEcc-CCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004998 141 GIVVHNVRPSCFVMSS-FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 141 gIvHrDLKP~NILl~~-~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
||+||||||+||+++. .+.++|+|||.+........
T Consensus 128 ~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~------------------------------------------- 164 (268)
T cd06624 128 QIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINP------------------------------------------- 164 (268)
T ss_pred CEeecCCCHHHEEEcCCCCeEEEecchhheecccCCC-------------------------------------------
Confidence 9999999999999975 67899999887733211000
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC--CCccccchhh
Q 004998 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP--VSCASDIYRL 297 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~--~s~~sDIwSL 297 (720)
......|++.|+|||.+.+.. ++.++|||||
T Consensus 165 -----------------------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~sl 197 (268)
T cd06624 165 -----------------------------------------------CTETFTGTLQYMAPEVIDKGPRGYGAPADIWSL 197 (268)
T ss_pred -----------------------------------------------ccccCCCCccccChhhhccccccCCchhhhHHH
Confidence 000124688999999987654 7899999999
Q ss_pred hhhhhhccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004998 298 GVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 298 Gvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
||++|+|++ ||...................+.++... +...+|+.+||+++|.+|||+.|++.||||
T Consensus 198 Gvvl~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 268 (268)
T cd06624 198 GCTIVEMATGKPPFIELGEPQAAMFKVGMFKIHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQDPFL 268 (268)
T ss_pred HHHHHHHHhCCCCCccccChhhhHhhhhhhccCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhCCCC
Confidence 999999999 5543322212221111111122222223 345599999999999999999999999997
No 164
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=99.96 E-value=1.5e-29 Score=266.25 Aligned_cols=203 Identities=20% Similarity=0.249 Sum_probs=157.9
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC---------------CCCCHHHHHHHHH
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---------------RSVDVYECLHIFR 128 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~---------------~~l~~~~~~~i~~ 128 (720)
.+|..++.+++||||+++++ ++.... ..|++||| .+++|.+++.... ..+++.+++.++.
T Consensus 56 ~~ei~~l~~l~h~~i~~~~~-~~~~~~---~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 131 (283)
T cd05048 56 RQEAELMSDLQHPNIVCLLG-VCTKEQ---PTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAI 131 (283)
T ss_pred HHHHHHHHhcCCcccceEEE-EEcCCC---ceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHH
Confidence 46777899999999999999 554432 57999999 8999999994321 3488999999999
Q ss_pred HHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccccc
Q 004998 129 QIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRRE 208 (720)
Q Consensus 129 QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~ 208 (720)
||+.||.|||++||+|+||||+||+++.++.++|+|||++......
T Consensus 132 ~l~~al~~lH~~~i~H~dlkp~Nil~~~~~~~~L~dfg~~~~~~~~---------------------------------- 177 (283)
T cd05048 132 QIAAGMEYLSSHHFVHRDLAARNCLVGEGLTVKISDFGLSRDIYSA---------------------------------- 177 (283)
T ss_pred HHHHHHHHHHhCCeeccccccceEEEcCCCcEEECCCcceeecccc----------------------------------
Confidence 9999999999999999999999999999999999999887432110
Q ss_pred ccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCC
Q 004998 209 DLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV 288 (720)
Q Consensus 209 Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 288 (720)
+. .. ......+++.|+|||.+.+..+
T Consensus 178 ~~----------------------------------~~--------------------~~~~~~~~~~y~aPE~~~~~~~ 203 (283)
T cd05048 178 DY----------------------------------YR--------------------VQSKSLLPVRWMPPEAILYGKF 203 (283)
T ss_pred cc----------------------------------cc--------------------ccCCCcccccccCHHHhccCcC
Confidence 00 00 0001356788999999988889
Q ss_pred Cccccchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 289 SCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 289 s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
+.++|||||||++|||++ ||...... ..+..+..+..++......+...+|+.+||..||.+||++.||++
T Consensus 204 ~~~sDv~slG~il~el~~~g~~p~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~ 278 (283)
T cd05048 204 TTESDIWSFGVVLWEIFSYGLQPYYGFSNQ-EVIEMIRSRQLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHT 278 (283)
T ss_pred chhhhHHHHHHHHHHHHcCCCCCCCCCCHH-HHHHHHHcCCcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 999999999999999997 66554433 445555555444433333345559999999999999999999986
No 165
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=99.96 E-value=2.2e-29 Score=266.38 Aligned_cols=209 Identities=15% Similarity=0.148 Sum_probs=156.0
Q ss_pred ehhhhcccC-CCCCceecccceeecCC-CCCcEEEEEec-CCCCHHHHHhC---CCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004998 66 SDGVELTHG-DHLRNQGGLSGVCENEA-AIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 66 ~e~~~Ls~l-~HpnIV~l~~~~~~~~~-~~~~~~lv~E~-~ggsL~~~L~~---~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
.|..++.++ +||||+++++.+...+. ....+|++||| .|++|.++++. ....+++..++.++.||+.||.|||+
T Consensus 67 ~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~ 146 (291)
T cd06639 67 AEYNILQSLPNHPNVVKFYGMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHN 146 (291)
T ss_pred HHHHHHHHhcCCCCeEEEEEEEEeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 566677777 89999999994443322 23468999999 89999998842 34458999999999999999999999
Q ss_pred cCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004998 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
.||+||||||+||+++.++.++|+|||.+....... .
T Consensus 147 ~~ivH~dlkp~nili~~~~~~kl~dfg~~~~~~~~~----------------------------------~--------- 183 (291)
T cd06639 147 NRIIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTR----------------------------------L--------- 183 (291)
T ss_pred CCeeccCCCHHHEEEcCCCCEEEeecccchhccccc----------------------------------c---------
Confidence 999999999999999999999999998874321110 0
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC-----CCccccc
Q 004998 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-----VSCASDI 294 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-----~s~~sDI 294 (720)
......|+..|+|||.+.... ++.++||
T Consensus 184 -----------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di 216 (291)
T cd06639 184 -----------------------------------------------RRNTSVGTPFWMAPEVIACEQQYDYSYDARCDV 216 (291)
T ss_pred -----------------------------------------------cccCccCCccccChhhhcCCCCcccccCCccch
Confidence 000135788999999986432 6889999
Q ss_pred hhhhhhhhhccc---cCCCCchHHHHHHHhhcCCCCcc-ccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccC
Q 004998 295 YRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQ-LLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLN 365 (720)
Q Consensus 295 wSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~-~~~~~-p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~ 365 (720)
|||||++|||++ ||.......... .+.....+.. ....+ +...+||.+||+++|++||++.|+++||||+
T Consensus 217 ~slGvi~~el~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~ 291 (291)
T cd06639 217 WSLGITAIELGDGDPPLFDMHPVKTLF-KIPRNPPPTLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEHPFIK 291 (291)
T ss_pred HHHHHHHHHHhhCCCCCCCCcHHHHHH-HHhcCCCCCCCcccccCHHHHHHHHHHhhcChhhCcCHHHHhcCcccC
Confidence 999999999999 555443332222 2322222111 11122 3445999999999999999999999999984
No 166
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=99.96 E-value=1.9e-30 Score=293.76 Aligned_cols=209 Identities=20% Similarity=0.256 Sum_probs=154.5
Q ss_pred ehhhhcccCC-CCCceecccceee-c-CCC-CCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004998 66 SDGVELTHGD-HLRNQGGLSGVCE-N-EAA-IDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 66 ~e~~~Ls~l~-HpnIV~l~~~~~~-~-~~~-~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
+|+.+|+.|. |||||.|++.... . ... ...++|.||| .|+.|-++|++ -...|++.++++||+|+++||.+||.
T Consensus 83 ~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~ 162 (738)
T KOG1989|consen 83 REIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHY 162 (738)
T ss_pred HHHHHHHHhcCCCceeeEeccccccccCCCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhc
Confidence 6777899988 9999999993332 2 222 4578999999 66899999942 23349999999999999999999999
Q ss_pred cC--ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCC
Q 004998 140 QG--IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 140 ~g--IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~ 217 (720)
.. |||||||-|||||+.+|+.||||||.++..-.... ..+++.
T Consensus 163 ~~pPiIHRDLKiENvLls~~g~~KLCDFGSatt~~~~~~-----------------~~~e~~------------------ 207 (738)
T KOG1989|consen 163 LKPPIIHRDLKIENVLLSADGNYKLCDFGSATTKILSPT-----------------SAQEVN------------------ 207 (738)
T ss_pred CCCccchhhhhhhheEEcCCCCEEeCcccccccccCCCc-----------------cHHHHH------------------
Confidence 87 99999999999999999999999998843211100 000000
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccc---cCCCCCccccc
Q 004998 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEEL---AGAPVSCASDI 294 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l---~~~~~s~~sDI 294 (720)
...++ ....-|+.|+|||++ .+.+++.|+||
T Consensus 208 ------------------------------------~ve~e----------I~k~TTp~YRsPEMIDlysg~pI~eKsDI 241 (738)
T KOG1989|consen 208 ------------------------------------YVEEE----------IEKYTTPQYRSPEMIDLYSGLPIGEKSDI 241 (738)
T ss_pred ------------------------------------HHHHH----------HHhhCCccccChHHHhhhcCCCCcchhHH
Confidence 00000 112349999999987 56679999999
Q ss_pred hhhhhhhhhccc---cCCCCchHHHHHHHhhcCCC-CccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 295 YRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVL-PPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 295 wSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~-p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|+|||+||-|+. ||...... .|.++.+ -|.+...+....+||..||++||.+||++-+++.
T Consensus 242 WALGclLYkLCy~t~PFe~sg~l-----aIlng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~ 306 (738)
T KOG1989|consen 242 WALGCLLYKLCYFTTPFEESGKL-----AILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLE 306 (738)
T ss_pred HHHHHHHHHHHHhCCCcCcCcce-----eEEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHH
Confidence 999999999987 88775332 1223222 2222344445569999999999999999999986
No 167
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.96 E-value=5.9e-29 Score=266.56 Aligned_cols=206 Identities=17% Similarity=0.203 Sum_probs=161.3
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
...|..++..++||||+++++ ++.+.. ..|++|||..++|.+++.....++++.+++.++.||+.||.|||++||+
T Consensus 68 ~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~ 143 (313)
T cd06633 68 IIKEVKFLQQLKHPNTIEYKG-CYLKEH---TAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMI 143 (313)
T ss_pred HHHHHHHHHhCCCCCCccEEE-EEEeCC---EEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 346778999999999999999 554443 5799999966789998866556699999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
|+||||+||+++.++.++|+|||.+......
T Consensus 144 H~dl~p~nili~~~~~~kL~dfg~~~~~~~~------------------------------------------------- 174 (313)
T cd06633 144 HRDIKAGNILLTEPGQVKLADFGSASKSSPA------------------------------------------------- 174 (313)
T ss_pred cCCCChhhEEECCCCCEEEeecCCCcccCCC-------------------------------------------------
Confidence 9999999999999999999988876211000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCcccc---CCCCCccccchhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA---GAPVSCASDIYRLGVL 300 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~---~~~~s~~sDIwSLGvl 300 (720)
....|+..|+|||++. ...++.++|||||||+
T Consensus 175 ---------------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvi 209 (313)
T cd06633 175 ---------------------------------------------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT 209 (313)
T ss_pred ---------------------------------------------CCccccccccChhhccccCCCCCCchhhHHHHHHH
Confidence 0135788999999984 3458899999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004998 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
+|+|++ ||.......... .+.....+......++ ...+|+.+||+++|.+||++.+++.||||....
T Consensus 210 l~el~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~~~~~~~~ 280 (313)
T cd06633 210 CIELAERKPPLFNMNAMSALY-HIAQNDSPTLQSNEWTDSFRGFVDYCLQKIPQERPASAELLRHDFVRRDR 280 (313)
T ss_pred HHHHHhCCCCCCCCChHHHHH-HHHhcCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCcccCCCc
Confidence 999998 555544333332 2333333333333344 356999999999999999999999999999753
No 168
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=99.96 E-value=1.1e-29 Score=271.51 Aligned_cols=205 Identities=20% Similarity=0.204 Sum_probs=156.9
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH-cCc
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-QGI 142 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs-~gI 142 (720)
.+|..++.+++||||+++++ .+..+. .+|++||| .|++|.+++.+. ..+++..+..++.||+.||.|||+ .+|
T Consensus 47 ~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~ey~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~~i 121 (308)
T cd06615 47 IRELKVLHECNSPYIVGFYG-AFYSDG---EISICMEHMDGGSLDQVLKKA-GRIPENILGKISIAVLRGLTYLREKHKI 121 (308)
T ss_pred HHHHHHHHhCCCCCCCeEEE-EEeeCC---EEEEEeeccCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhhCCE
Confidence 36788999999999999999 554443 67999999 899999999654 448999999999999999999997 699
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+|+||||+|||++.++.++|+|||.+......
T Consensus 122 ~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~------------------------------------------------ 153 (308)
T cd06615 122 MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS------------------------------------------------ 153 (308)
T ss_pred EECCCChHHEEEecCCcEEEccCCCccccccc------------------------------------------------
Confidence 99999999999999999999988876221000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......|++.|+|||.+.+..++.++|||||||++|
T Consensus 154 --------------------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~ 189 (308)
T cd06615 154 --------------------------------------------MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLV 189 (308)
T ss_pred --------------------------------------------ccccCCCCcCccChhHhcCCCCCccchHHHHHHHHH
Confidence 000136788999999998888999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcC-----------------------------------CCCccccc--cCchHHHHHH
Q 004998 303 ELFC---PFSTGEEKTRTMSSLRHR-----------------------------------VLPPQLLL--KFPKEASFCL 342 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~-----------------------------------~~p~~~~~--~~p~~~~li~ 342 (720)
+|++ ||...... .....+... ..++..+. ..+...+|+.
T Consensus 190 ~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 268 (308)
T cd06615 190 EMAIGRYPIPPPDAK-ELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVD 268 (308)
T ss_pred HHHhCCCCCCCcchh-hHHHhhcCccccccccCCcccccCCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHH
Confidence 9999 55433211 111111100 00111110 1234569999
Q ss_pred HcCCCCCCCCCChHHHHcCcccCCC
Q 004998 343 WLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 343 ~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
+||..+|++|||+.++++||||...
T Consensus 269 ~~l~~~P~~Rpt~~~ll~~~~~~~~ 293 (308)
T cd06615 269 KCLKKNPKERADLKELTKHPFIKRA 293 (308)
T ss_pred HHccCChhhCcCHHHHhcChhhhhc
Confidence 9999999999999999999999764
No 169
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.96 E-value=5.6e-30 Score=280.41 Aligned_cols=193 Identities=22% Similarity=0.247 Sum_probs=151.9
Q ss_pred hhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccC
Q 004998 69 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 147 (720)
Q Consensus 69 ~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDL 147 (720)
..+..-+||||+++.+ ++.++. ++|+|||+ .|+-|.+.+.... ....++..|++||+.||.|||++|||||||
T Consensus 368 ~~~~~~~h~niv~~~~-v~~~~~---~~~~v~e~l~g~ell~ri~~~~--~~~~e~~~w~~~lv~Av~~LH~~gvvhRDL 441 (612)
T KOG0603|consen 368 ISLLVRDHPNIVKSHD-VYEDGK---EIYLVMELLDGGELLRRIRSKP--EFCSEASQWAAELVSAVDYLHEQGVVHRDL 441 (612)
T ss_pred hhhhhcCCCcceeecc-eecCCc---eeeeeehhccccHHHHHHHhcc--hhHHHHHHHHHHHHHHHHHHHhcCeeecCC
Confidence 3455578999999999 676665 57999999 7777766664433 223788899999999999999999999999
Q ss_pred CCCcEEE-ccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccc
Q 004998 148 RPSCFVM-SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 226 (720)
Q Consensus 148 KP~NILl-~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~ 226 (720)
||+|||+ ...++++|+|||.++..... +
T Consensus 442 kp~NIL~~~~~g~lrltyFG~a~~~~~~--------------------------------------------------~- 470 (612)
T KOG0603|consen 442 KPGNILLDGSAGHLRLTYFGFWSELERS--------------------------------------------------C- 470 (612)
T ss_pred ChhheeecCCCCcEEEEEechhhhCchh--------------------------------------------------h-
Confidence 9999999 58999999999988432111 0
Q ss_pred cCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhccc
Q 004998 227 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC 306 (720)
Q Consensus 227 q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt 306 (720)
...+=|..|.|||++....|+.++||||||++||+||+
T Consensus 471 ------------------------------------------~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~ 508 (612)
T KOG0603|consen 471 ------------------------------------------DTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLT 508 (612)
T ss_pred ------------------------------------------cccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHh
Confidence 00133788999999998889999999999999999999
Q ss_pred ---cCCCCchHHHHHHHhhcCCCCccccccCchHH-HHHHHcCCCCCCCCCChHHHHcCccc
Q 004998 307 ---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 307 ---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~-~li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
||........++..+ .++.+....+..+ +|+.+||++||.+||++.+++.||||
T Consensus 509 G~tp~~~~P~~~ei~~~i----~~~~~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~ 566 (612)
T KOG0603|consen 509 GRTLFAAHPAGIEIHTRI----QMPKFSECVSDEAKDLLQQLLQVDPALRLGADEIGAHPWF 566 (612)
T ss_pred CCCccccCCchHHHHHhh----cCCccccccCHHHHHHHHHhccCChhhCcChhhhccCcch
Confidence 555444433444444 4444444445554 99999999999999999999999999
No 170
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.96 E-value=1.3e-29 Score=267.06 Aligned_cols=201 Identities=18% Similarity=0.224 Sum_probs=152.6
Q ss_pred hcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCC
Q 004998 70 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 148 (720)
Q Consensus 70 ~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLK 148 (720)
++...+||||+.+++ .+..+. .+++|||| .|++|.+++...+ .+++..+..++.||+.||.|||++||+|||||
T Consensus 50 ~~~~~~~~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~i~~~~-~l~~~~~~~i~~qi~~al~~lH~~~ivH~dik 124 (279)
T cd05633 50 LVSTGDCPFIVCMTY-AFHTPD---KLCFILDLMNGGDLHYHLSQHG-VFSEKEMRFYATEIILGLEHMHNRFVVYRDLK 124 (279)
T ss_pred HHhhCCCCcEeEEEE-EEecCC---eEEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCC
Confidence 444568999999998 554433 57999999 9999999995544 49999999999999999999999999999999
Q ss_pred CCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccC
Q 004998 149 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 228 (720)
Q Consensus 149 P~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~ 228 (720)
|+|||++.++.++++|||++...+...
T Consensus 125 p~Nil~~~~~~~~l~dfg~~~~~~~~~----------------------------------------------------- 151 (279)
T cd05633 125 PANILLDEHGHVRISDLGLACDFSKKK----------------------------------------------------- 151 (279)
T ss_pred HHHEEECCCCCEEEccCCcceeccccC-----------------------------------------------------
Confidence 999999999999999998873221000
Q ss_pred CCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-CCCCccccchhhhhhhhhccc-
Q 004998 229 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLFELFC- 306 (720)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sDIwSLGvll~eLlt- 306 (720)
.....||+.|+|||.+.+ ..++.++|||||||++|||++
T Consensus 152 ---------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g 192 (279)
T cd05633 152 ---------------------------------------PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRG 192 (279)
T ss_pred ---------------------------------------ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhC
Confidence 001257899999999864 458999999999999999999
Q ss_pred --cCCCCchHH-HHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCCc
Q 004998 307 --PFSTGEEKT-RTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEPR 368 (720)
Q Consensus 307 --pf~~~~~~~-~~~~~l~~~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~~ 368 (720)
||....... ....... ...+..++... +...+|+.+||+.||++|| ++.|+++||||+...
T Consensus 193 ~~pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~~~~~~~ 262 (279)
T cd05633 193 HSPFRQHKTKDKHEIDRMT-LTVNVELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFFKGID 262 (279)
T ss_pred CCCcCCCCCcCHHHHHHHh-hcCCcCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCccccCCC
Confidence 664332111 1111111 11222222233 4556999999999999999 699999999999863
No 171
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=99.96 E-value=2.3e-29 Score=262.36 Aligned_cols=211 Identities=18% Similarity=0.178 Sum_probs=158.2
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+.++|..++.+++||||+++++ ++.+.. ...++++||| .|++|.+++.+.. .+++..++.++.||+.||.|||++|
T Consensus 50 ~~~~E~~~l~~l~h~~i~~~~~-~~~~~~-~~~~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~l~~~l~~lH~~~ 126 (265)
T cd06652 50 ALECEIQLLKNLLHERIVQYYG-CLRDPM-ERTLSIFMEHMPGGSIKDQLKSYG-ALTENVTRKYTRQILEGVSYLHSNM 126 (265)
T ss_pred HHHHHHHHHHhcCCCCeeeEEe-EeccCC-CceEEEEEEecCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3446788999999999999999 443332 2357899999 8999999996543 4899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+|+||||+||+++.++.++|+|||.+......... .-
T Consensus 127 i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~~~-------------------------------~~----------- 164 (265)
T cd06652 127 IVHRDIKGANILRDSVGNVKLGDFGASKRLQTICLS-------------------------------GT----------- 164 (265)
T ss_pred EecCCCCHHHEEecCCCCEEECcCcccccccccccc-------------------------------cc-----------
Confidence 999999999999999999999999877432110000 00
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......|+..|+|||++.+..++.++|||||||++
T Consensus 165 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il 199 (265)
T cd06652 165 ---------------------------------------------GMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTV 199 (265)
T ss_pred ---------------------------------------------ccccCCCCccccChhhhcCCCCCcchhHHHHHHHH
Confidence 00013578899999999888899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccC
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLN 365 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~hp~~~ 365 (720)
|||++ ||........... +......+..+...+ ...+++.+|| .+|+.||+++|+++|||+.
T Consensus 200 ~el~~g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~l-~~p~~Rp~~~~il~~~~~~ 265 (265)
T cd06652 200 VEMLTEKPPWAEFEAMAAIFK-IATQPTNPVLPPHVSDHCRDFLKRIF-VEAKLRPSADELLRHTFVH 265 (265)
T ss_pred HHHhhCCCCCCccchHHHHHH-HhcCCCCCCCchhhCHHHHHHHHHHh-cChhhCCCHHHHhcCcccC
Confidence 99999 5544433333222 222222222222333 3458999999 4999999999999999984
No 172
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=99.96 E-value=2e-29 Score=260.77 Aligned_cols=206 Identities=21% Similarity=0.195 Sum_probs=159.8
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+++.++||||+++++ ++..+. .+|++||| .+++|.+++.+.. .+++..+..++.||+.||.|||+.|
T Consensus 48 ~~~~e~~~l~~~~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~ 122 (258)
T cd06632 48 QLEQEIALLSKLQHPNIVQYLG-TEREED---NLYIFLELVPGGSLAKLLKKYG-SFPEPVIRLYTRQILLGLEYLHDRN 122 (258)
T ss_pred HHHHHHHHHHhcCCCCchheee-eEecCC---eEEEEEEecCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3447778999999999999999 444443 67999999 8999999995543 4899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+|+||+|+||+++.++.+||+|||.+.......
T Consensus 123 i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~---------------------------------------------- 156 (258)
T cd06632 123 TVHRDIKGANILVDTNGVVKLADFGMAKQVVEFS---------------------------------------------- 156 (258)
T ss_pred cccCCCCHHHEEECCCCCEEEccCccceeccccc----------------------------------------------
Confidence 9999999999999999999999988763221100
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC-CCccccchhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVL 300 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGvl 300 (720)
......|++.|+|||.+.... ++.++|+|||||+
T Consensus 157 ---------------------------------------------~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~ 191 (258)
T cd06632 157 ---------------------------------------------FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCT 191 (258)
T ss_pred ---------------------------------------------cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHH
Confidence 000135788999999997776 8999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004998 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
+|+|++ ||..................+.......+...+|+.+||+.+|.+||++.+++.|||+
T Consensus 192 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~ 258 (258)
T cd06632 192 VLEMATGKPPWSQLEGVAAVFKIGRSKELPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLEHPFV 258 (258)
T ss_pred HHHHHhCCCCcccCcHHHHHHHHHhcccCCCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhcCCCC
Confidence 999999 6655443322222222122222222223455699999999999999999999999996
No 173
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=99.96 E-value=3.1e-30 Score=267.16 Aligned_cols=204 Identities=25% Similarity=0.363 Sum_probs=157.2
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
+|..++.+++||||+++++ ++.+.. .++++||+ .+++|.++|.+ ...+++.+++.++.||+.||.+||+.||+|
T Consensus 47 ~e~~~~~~l~~~~i~~~~~-~~~~~~---~~~~v~~~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H 121 (260)
T PF00069_consen 47 REIKILRRLRHPNIVQILD-VFQDDN---YLYIVMEYCPGGSLQDYLQK-NKPLSEEEILKIAYQILEALAYLHSKGIVH 121 (260)
T ss_dssp HHHHHHHHHTBTTBCHEEE-EEEESS---EEEEEEEEETTEBHHHHHHH-HSSBBHHHHHHHHHHHHHHHHHHHHTTEEE
T ss_pred hhhhccccccccccccccc-cccccc---cccccccccccccccccccc-cccccccccccccccccccccccccccccc
Confidence 4778899999999999999 554432 57899999 77799999963 334899999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
+||||+||+++.++.++|+|||.+...... .
T Consensus 122 ~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~-----------------------------------~-------------- 152 (260)
T PF00069_consen 122 RDIKPENILLDENGEVKLIDFGSSVKLSEN-----------------------------------N-------------- 152 (260)
T ss_dssp SSBSGGGEEESTTSEEEESSGTTTEESTST-----------------------------------T--------------
T ss_pred cccccccccccccccccccccccccccccc-----------------------------------c--------------
Confidence 999999999999999999999887321000 0
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCcccc-CCCCCccccchhhhhhhhh
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-GAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~-~~~~s~~sDIwSLGvll~e 303 (720)
.......+++.|+|||++. +..++.++||||||+++|+
T Consensus 153 -----------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~ 191 (260)
T PF00069_consen 153 -----------------------------------------ENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYE 191 (260)
T ss_dssp -----------------------------------------SEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHH
T ss_pred -----------------------------------------ccccccccccccccccccccccccccccccccccccccc
Confidence 0001146799999999998 7779999999999999999
Q ss_pred ccc---cCCCCc--hHHHHHHHhhcCCCCcccccc---CchHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004998 304 LFC---PFSTGE--EKTRTMSSLRHRVLPPQLLLK---FPKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 304 Llt---pf~~~~--~~~~~~~~l~~~~~p~~~~~~---~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
|++ ||.... ..............+...... .+...+++.+||+.||++||++.++++||||
T Consensus 192 l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~~~~ 260 (260)
T PF00069_consen 192 LLTGKLPFEESNSDDQLEIIEKILKRPLPSSSQQSREKSEELRDLIKKMLSKDPEQRPSAEELLKHPWF 260 (260)
T ss_dssp HHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTTSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTSGGG
T ss_pred ccccccccccccchhhhhhhhhcccccccccccccchhHHHHHHHHHHHccCChhHCcCHHHHhcCCCC
Confidence 999 666541 122222222221111111111 1455699999999999999999999999997
No 174
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.96 E-value=1.9e-29 Score=268.21 Aligned_cols=208 Identities=15% Similarity=0.190 Sum_probs=161.6
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..|..+++.++||||+++++ .+.... .+|+++|| .+++|.+++... .+++.++..++.||+.||.|||++|++
T Consensus 64 ~~e~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~--~l~~~~~~~i~~~l~~al~~LH~~~i~ 137 (296)
T cd06655 64 INEILVMKELKNPNIVNFLD-SFLVGD---ELFVVMEYLAGGSLTDVVTET--CMDEAQIAAVCRECLQALEFLHANQVI 137 (296)
T ss_pred HHHHHHHHhcCCCceeeeee-eEecCc---eEEEEEEecCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 35777899999999999999 454433 67999999 899999998543 389999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
|+||||+||+++.++.++|+|||.+........
T Consensus 138 H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~----------------------------------------------- 170 (296)
T cd06655 138 HRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQS----------------------------------------------- 170 (296)
T ss_pred cCCCCHHHEEECCCCCEEEccCccchhcccccc-----------------------------------------------
Confidence 999999999999999999999987743211000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......|++.|+|||.+.+..++.++|||||||++|+
T Consensus 171 -------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~ 207 (296)
T cd06655 171 -------------------------------------------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIE 207 (296)
T ss_pred -------------------------------------------cCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHH
Confidence 0001357889999999988889999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004998 304 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
|++ ||..................+....... +...+|+.+||..||.+||++.++++||||....
T Consensus 208 lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~~~~~~~~ 276 (296)
T cd06655 208 MVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFLKLAK 276 (296)
T ss_pred HHhCCCCCCCCCHHHHHHHHHhcCCcccCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhhChHhhhcc
Confidence 999 6665544333222222221111122223 3455999999999999999999999999998753
No 175
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=99.96 E-value=1.5e-29 Score=266.23 Aligned_cols=210 Identities=16% Similarity=0.193 Sum_probs=156.6
Q ss_pred eeehhhhcccC-CCCCceecccceeecC--CCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHH
Q 004998 64 KHSDGVELTHG-DHLRNQGGLSGVCENE--AAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 64 ~~~e~~~Ls~l-~HpnIV~l~~~~~~~~--~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
.+.|..++.++ +||||+++++.++... .....+|++||| .+++|.+++.. ....+++..++.++.||+.||.|||
T Consensus 59 ~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH 138 (282)
T cd06636 59 IKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLH 138 (282)
T ss_pred HHHHHHHHHHhcCCCcEEEEeeehhcccccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 34566677777 7999999999444322 223478999999 88899999943 3345889999999999999999999
Q ss_pred HcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCC
Q 004998 139 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
++||+|+||||+||+++.++.++|+|||.+........
T Consensus 139 ~~~ivH~dl~~~nili~~~~~~~l~dfg~~~~~~~~~~------------------------------------------ 176 (282)
T cd06636 139 AHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVG------------------------------------------ 176 (282)
T ss_pred HCCcccCCCCHHHEEECCCCCEEEeeCcchhhhhcccc------------------------------------------
Confidence 99999999999999999999999999887732210000
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCcccc-----CCCCCcccc
Q 004998 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-----GAPVSCASD 293 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~-----~~~~s~~sD 293 (720)
......|++.|+|||++. +..++.++|
T Consensus 177 ------------------------------------------------~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~D 208 (282)
T cd06636 177 ------------------------------------------------RRNTFIGTPYWMAPEVIACDENPDATYDYRSD 208 (282)
T ss_pred ------------------------------------------------CCCcccccccccCHhhcCcccCcCcCCCcccc
Confidence 000136789999999986 334888999
Q ss_pred chhhhhhhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004998 294 IYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 294 IwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
||||||++|||++ ||.......... .+.....+......++ ...+||.+||+.||.+||++.|||+||||
T Consensus 209 vwslG~~l~el~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~~~~ 282 (282)
T cd06636 209 IWSLGITAIEMAEGAPPLCDMHPMRALF-LIPRNPPPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKHPFI 282 (282)
T ss_pred hhHHHHHHHHHHhCCCCccccCHHhhhh-hHhhCCCCCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhcCCCC
Confidence 9999999999999 554433322222 2222222222222334 44699999999999999999999999997
No 176
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=99.96 E-value=2.4e-29 Score=260.43 Aligned_cols=207 Identities=19% Similarity=0.250 Sum_probs=163.9
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+..+|..++++++||||+++++ ++.... ..+++||| .+++|.+++.+. ...+++..+..++.|++.||.|||+.
T Consensus 45 ~~~~e~~~l~~~~h~~i~~~~~-~~~~~~---~~~~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~ 120 (256)
T cd08221 45 DALNEIVILSLLQHPNIIAYYN-HFMDDN---TLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKA 120 (256)
T ss_pred HHHHHHHHHHhCCCCCeeEEEe-EEecCC---eEEEEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 3447788999999999999999 444432 57999999 899999999543 45589999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004998 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
|++|+||||+||+++.++.+|++|||.+........
T Consensus 121 ~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~-------------------------------------------- 156 (256)
T cd08221 121 GILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYS-------------------------------------------- 156 (256)
T ss_pred CccccCCChHhEEEeCCCCEEECcCcceEEcccccc--------------------------------------------
Confidence 999999999999999999999999887733211100
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhh
Q 004998 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
......|++.|+|||.+.+..++.++|||||||+
T Consensus 157 ----------------------------------------------~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i 190 (256)
T cd08221 157 ----------------------------------------------MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCV 190 (256)
T ss_pred ----------------------------------------------cccccCCCccccCHhhcCCCCCCCcchhHHHHHH
Confidence 0001357899999999988888999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004998 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
+|||++ ||...... .....+..+.+++.......+..+|+.+||+++|.+||++.++|+|||+
T Consensus 191 ~~~l~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~~l 256 (256)
T cd08221 191 LYELLTLKRTFDATNPL-NLVVKIVQGNYTPVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQPLL 256 (256)
T ss_pred HHHHHHCCCCCCCCCHH-HHHHHHHcCCCCCCccccCHHHHHHHHHHcccCcccCCCHHHHhhCcCC
Confidence 999999 55544333 3444444444444433334455699999999999999999999999986
No 177
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=99.96 E-value=1.7e-29 Score=267.03 Aligned_cols=206 Identities=16% Similarity=0.270 Sum_probs=154.6
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.+|..++++++||||+++++ ++.+.. ..|+||||.+++|.+++......+++..++.++.||+.||.|||++||+|
T Consensus 51 ~~E~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H 126 (291)
T cd07844 51 IREASLLKDLKHANIVTLHD-IIHTKK---TLTLVFEYLDTDLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLH 126 (291)
T ss_pred HHHHHHHhhCCCcceeeEEE-EEecCC---eEEEEEecCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 36888999999999999999 554443 67999999667999999665556899999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+||+++.++.++|+|||.+.....+..
T Consensus 127 ~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~------------------------------------------------ 158 (291)
T cd07844 127 RDLKPQNLLISERGELKLADFGLARAKSVPSK------------------------------------------------ 158 (291)
T ss_pred ccCCHHHEEEcCCCCEEECccccccccCCCCc------------------------------------------------
Confidence 99999999999999999999887732211000
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-CCCccccchhhhhhhhh
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFE 303 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGvll~e 303 (720)
......++..|+|||++.+. .++.++|||||||++|+
T Consensus 159 ------------------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~ 196 (291)
T cd07844 159 ------------------------------------------TYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYE 196 (291)
T ss_pred ------------------------------------------cccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHH
Confidence 00002457889999998764 48899999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhc---CC---------------------C-Cccc----ccc--CchHHHHHHHcCCCCC
Q 004998 304 LFC---PFSTGEEKTRTMSSLRH---RV---------------------L-PPQL----LLK--FPKEASFCLWLLHPEP 349 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~---~~---------------------~-p~~~----~~~--~p~~~~li~~~L~~dP 349 (720)
|++ ||............+.. .. . +..+ ... .+...+|+.+||+++|
T Consensus 197 l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p 276 (291)
T cd07844 197 MATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEP 276 (291)
T ss_pred HHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCc
Confidence 998 55443322111111100 00 0 0000 011 1445599999999999
Q ss_pred CCCCChHHHHcCccc
Q 004998 350 SGRPKMGELLQSEFL 364 (720)
Q Consensus 350 ~~Rpta~eiL~hp~~ 364 (720)
.+|||+.++|+||||
T Consensus 277 ~~Rps~~e~l~~~~f 291 (291)
T cd07844 277 KKRISAAEAMKHPYF 291 (291)
T ss_pred ccccCHHHHhcCCCC
Confidence 999999999999998
No 178
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=99.96 E-value=7.9e-30 Score=265.28 Aligned_cols=207 Identities=19% Similarity=0.218 Sum_probs=161.4
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH-cCc
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-QGI 142 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs-~gI 142 (720)
.+|..++++++||||+++++ .+... ..+++++|| .+++|.+++......+++..+..++.||+.||.|||+ .|+
T Consensus 47 ~~e~~~l~~~~~~~i~~~~~-~~~~~---~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i 122 (265)
T cd06605 47 LRELDILHKCNSPYIVGFYG-AFYNN---GDISICMEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKI 122 (265)
T ss_pred HHHHHHHHHCCCCchhhhhe-eeecC---CEEEEEEEecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCe
Confidence 36777889999999999999 44444 368999999 7799999996554569999999999999999999999 999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+|+||||+||+++.++.++|+|||.+.......
T Consensus 123 ~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~----------------------------------------------- 155 (265)
T cd06605 123 IHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSL----------------------------------------------- 155 (265)
T ss_pred ecCCCCHHHEEECCCCCEEEeecccchhhHHHH-----------------------------------------------
Confidence 999999999999999999999998763210000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
. ....++..|+|||.+.+..++.++|||||||++|
T Consensus 156 --------------------------------------------~-~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~ 190 (265)
T cd06605 156 --------------------------------------------A-KTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLI 190 (265)
T ss_pred --------------------------------------------h-hcccCChhccCHHHHcCCCCCchhhHHHHHHHHH
Confidence 0 0035688899999999888999999999999999
Q ss_pred hccc---cCCCCc----hHHHHHHHhhcCCCCccccc-cCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 303 ELFC---PFSTGE----EKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 303 eLlt---pf~~~~----~~~~~~~~l~~~~~p~~~~~-~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
+|++ ||.... .....+..+.....+..... ..+...+||.+||..||.+|||+.+++.||||+..
T Consensus 191 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~~~~ 263 (265)
T cd06605 191 ELATGRFPYPPENDPPDGIFELLQYIVNEPPPRLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLEHPFIKKY 263 (265)
T ss_pred HHHhCCCCCCccccccccHHHHHHHHhcCCCCCCChhhcCHHHHHHHHHHcCCCchhCcCHHHHhhCchhhcc
Confidence 9999 555431 22223333333222222222 23345699999999999999999999999999865
No 179
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=99.96 E-value=1.8e-29 Score=264.50 Aligned_cols=207 Identities=19% Similarity=0.251 Sum_probs=163.3
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..+++.++||||+++++ .+.++ ..+|+++|| .+++|.+++... .+++..++.++.||+.||.|||++||+
T Consensus 47 ~~e~~~l~~l~h~~i~~~~~-~~~~~---~~~~~v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~ql~~~l~~lh~~~i~ 120 (274)
T cd06609 47 QQEIQFLSQCRSPYITKYYG-SFLKG---SKLWIIMEYCGGGSCLDLLKPG--KLDETYIAFILREVLLGLEYLHEEGKI 120 (274)
T ss_pred HHHHHHHHHcCCCCeeeeeE-EEEEC---CeEEEEEEeeCCCcHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 46777899999999999999 44444 368999999 899999999654 589999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
|+||+|+||+++.++.++|+|||.+...+....
T Consensus 121 h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~----------------------------------------------- 153 (274)
T cd06609 121 HRDIKAANILLSEEGDVKLADFGVSGQLTSTMS----------------------------------------------- 153 (274)
T ss_pred cCCCCHHHEEECCCCCEEEcccccceeeccccc-----------------------------------------------
Confidence 999999999999999999999888743321100
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......|++.|+|||.+.+..++.++|||||||++|+
T Consensus 154 -------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~ 190 (274)
T cd06609 154 -------------------------------------------KRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIE 190 (274)
T ss_pred -------------------------------------------ccccccCCccccChhhhccCCCCchhhHHHHHHHHHH
Confidence 0011357889999999998889999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCCCCcccccc-C-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004998 304 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLLK-F-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~~~p~~~~~~-~-p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
|++ ||...... .....+.... ++.+... . +...+++.+||..+|++|||++++++||||.....
T Consensus 191 l~tg~~p~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~~~~~~~~~ 259 (274)
T cd06609 191 LAKGEPPLSDLHPM-RVLFLIPKNN-PPSLEGNKFSKPFKDFVSLCLNKDPKERPSAKELLKHKFIKKAKK 259 (274)
T ss_pred HHhCCCCcccCchH-HHHHHhhhcC-CCCCcccccCHHHHHHHHHHhhCChhhCcCHHHHhhChhhcCCCc
Confidence 999 55443332 2223333332 2222222 3 44569999999999999999999999999988644
No 180
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=99.96 E-value=2.7e-29 Score=264.65 Aligned_cols=208 Identities=15% Similarity=0.154 Sum_probs=155.2
Q ss_pred ehhhhcccC-CCCCceecccceeecC-CCCCcEEEEEec-CCCCHHHHHhC---CCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004998 66 SDGVELTHG-DHLRNQGGLSGVCENE-AAIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 66 ~e~~~Ls~l-~HpnIV~l~~~~~~~~-~~~~~~~lv~E~-~ggsL~~~L~~---~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
.|..++..+ +||||+++++.++... .....++++||| .|++|.+++.. ....+++..+..++.||+.||.|||+
T Consensus 63 ~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~ 142 (286)
T cd06638 63 AEYNILKALSDHPNVVKFYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHV 142 (286)
T ss_pred HHHHHHHHHhcCCCeeeeeeeeeecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHh
Confidence 566678888 7999999999444322 233468999999 89999998842 33458999999999999999999999
Q ss_pred cCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004998 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
++|+||||||+||+++.++.++++|||.+....... .
T Consensus 143 ~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~----------------------------------~--------- 179 (286)
T cd06638 143 NKTIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTR----------------------------------L--------- 179 (286)
T ss_pred CCccccCCCHHhEEECCCCCEEEccCCceeecccCC----------------------------------C---------
Confidence 999999999999999999999999988873321000 0
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-----CCCCccccc
Q 004998 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-----APVSCASDI 294 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-----~~~s~~sDI 294 (720)
......|++.|+|||++.. ..++.++||
T Consensus 180 -----------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv 212 (286)
T cd06638 180 -----------------------------------------------RRNTSVGTPFWMAPEVIACEQQLDSTYDARCDV 212 (286)
T ss_pred -----------------------------------------------ccccccCCCcccChhhhchhhhccccccchhhh
Confidence 0001357899999999853 337899999
Q ss_pred hhhhhhhhhccc---cCCCCchHHHHHHHhhcCCCCcc-ccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004998 295 YRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQ-LLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 295 wSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~-~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
|||||++|||++ ||......... ..+.....+.. ....++ ...+|+.+||+.+|++|||+.|+++|+||
T Consensus 213 ~slGvi~~el~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~~~ 286 (286)
T cd06638 213 WSLGITAIELGDGDPPLADLHPMRAL-FKIPRNPPPTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHVFI 286 (286)
T ss_pred hhHHHHHHHHhcCCCCCCCCchhHHH-hhccccCCCcccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhcccC
Confidence 999999999998 55544333222 22222221211 122223 45699999999999999999999999997
No 181
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.96 E-value=7.2e-30 Score=238.24 Aligned_cols=209 Identities=17% Similarity=0.223 Sum_probs=165.7
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
-||+.+|..++|.|||+++++ ...+. .+.+|+||+..+|..+...-++.++.+.++.++.|++.||.|+|++++.|
T Consensus 49 lreicllkelkhknivrl~dv-lhsdk---kltlvfe~cdqdlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnvlh 124 (292)
T KOG0662|consen 49 LREICLLKELKHKNIVRLHDV-LHSDK---KLTLVFEFCDQDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLH 124 (292)
T ss_pred HHHHHHHHHhhhcceeehhhh-hccCc---eeEEeHHHhhHHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhh
Confidence 378889999999999999994 44443 46899999999999999777777999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||.|+||+.+|.+|++|||+++.+|.+..+.
T Consensus 125 rdlkpqnllin~ngelkladfglarafgipvrcy---------------------------------------------- 158 (292)
T KOG0662|consen 125 RDLKPQNLLINRNGELKLADFGLARAFGIPVRCY---------------------------------------------- 158 (292)
T ss_pred ccCCcceEEeccCCcEEecccchhhhcCCceEee----------------------------------------------
Confidence 9999999999999999999999997776652210
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC-CCccccchhhhhhhhh
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFE 303 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGvll~e 303 (720)
...+-|.||++|.++.|.. |+++.|+||.|||+.|
T Consensus 159 --------------------------------------------saevvtlwyrppdvlfgakly~tsidmwsagcifae 194 (292)
T KOG0662|consen 159 --------------------------------------------SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAE 194 (292)
T ss_pred --------------------------------------------eceeeeeeccCcceeeeeehhccchHhhhcchHHHH
Confidence 0135699999999999988 9999999999999999
Q ss_pred ccc---cCCCC-chHHHHHHHhhcCC------CC-----------cccc------ccCc----hHHHHHHHcCCCCCCCC
Q 004998 304 LFC---PFSTG-EEKTRTMSSLRHRV------LP-----------PQLL------LKFP----KEASFCLWLLHPEPSGR 352 (720)
Q Consensus 304 Llt---pf~~~-~~~~~~~~~l~~~~------~p-----------~~~~------~~~p----~~~~li~~~L~~dP~~R 352 (720)
|.. |..+. +...+.+...+.-. .| |.++ ...| ...+|+.++|.-+|..|
T Consensus 195 lanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qr 274 (292)
T KOG0662|consen 195 LANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQR 274 (292)
T ss_pred HhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccc
Confidence 998 54443 33333333332110 00 0000 0111 22489999999999999
Q ss_pred CChHHHHcCcccCCC
Q 004998 353 PKMGELLQSEFLNEP 367 (720)
Q Consensus 353 pta~eiL~hp~~~~~ 367 (720)
.+++++|+||||...
T Consensus 275 isaeaalqhpyf~d~ 289 (292)
T KOG0662|consen 275 ISAEAALQHPYFSDF 289 (292)
T ss_pred cCHHHHhcCcccccc
Confidence 999999999999864
No 182
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=99.96 E-value=2.2e-29 Score=260.37 Aligned_cols=203 Identities=15% Similarity=0.184 Sum_probs=153.9
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..+|.+++||||+++++ ++.... .+|+|||| .+++|.+++......+++..++.++.||+.||.|||++||
T Consensus 40 ~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i 115 (252)
T cd05084 40 FLQEARILKQYSHPNIVRLIG-VCTQKQ---PIYIVMELVQGGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHC 115 (252)
T ss_pred HHHHHHHHHhCCCCCcceEEE-EEcCCC---CeEEEEeeccCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 346777899999999999999 554443 57999999 8999999996655568999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.++|+|||.+...... .+ .
T Consensus 116 ~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~----------------------------------~~---~-------- 150 (252)
T cd05084 116 IHRDLAARNCLVTEKNVLKISDFGMSREEEDG----------------------------------VY---A-------- 150 (252)
T ss_pred cccccchheEEEcCCCcEEECccccCcccccc----------------------------------cc---c--------
Confidence 99999999999999999999999887321100 00 0
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
........+..|+|||.+.+..++.++|||||||++|
T Consensus 151 -------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ 187 (252)
T cd05084 151 -------------------------------------------STGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLW 187 (252)
T ss_pred -------------------------------------------ccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHH
Confidence 0000012245699999998888999999999999999
Q ss_pred hccc----cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 303 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 303 eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
||++ ||...... .....+.....++ ..... +...+|+.+||+++|++|||+.++++
T Consensus 188 e~~~~~~~p~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 248 (252)
T cd05084 188 EAFSLGAVPYANLSNQ-QTREAIEQGVRLP-CPELCPDAVYRLMERCWEYDPGQRPSFSTVHQ 248 (252)
T ss_pred HHHhCCCCCccccCHH-HHHHHHHcCCCCC-CcccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 9997 45433322 3333333332222 22333 34459999999999999999999975
No 183
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.96 E-value=4.9e-29 Score=263.46 Aligned_cols=212 Identities=18% Similarity=0.234 Sum_probs=160.1
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHh---CCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLD---KPKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~---~~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
..+|..++++++||||+++++ ++.... ...+|++||| .|++|.+++. .....+++..+..++.||+.||.|||+
T Consensus 46 ~~~e~~~l~~l~h~~iv~~~~-~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~ 123 (287)
T cd06621 46 ILRELEINKSCKSPYIVKYYG-AFLDES-SSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHS 123 (287)
T ss_pred HHHHHHHHHhCCCCCeeeeee-EEEccC-CCeEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 346778999999999999999 443332 2357999999 8999998873 234558999999999999999999999
Q ss_pred cCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004998 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
.|++|+||+|+||+++.++.++|+|||++.......
T Consensus 124 ~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~-------------------------------------------- 159 (287)
T cd06621 124 RKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSL-------------------------------------------- 159 (287)
T ss_pred CCcccCCCCHHHEEEecCCeEEEeeccccccccccc--------------------------------------------
Confidence 999999999999999999999999998873211000
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhh
Q 004998 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
.....++..|+|||.+.+..++.++|||||||
T Consensus 160 ------------------------------------------------~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~ 191 (287)
T cd06621 160 ------------------------------------------------AGTFTGTSFYMAPERIQGKPYSITSDVWSLGL 191 (287)
T ss_pred ------------------------------------------------cccccCCccccCHHHhcCCCCCchhhHHHHHH
Confidence 00124578899999998888999999999999
Q ss_pred hhhhccc---cCCCCc----hHHHHHHHhhcCCCCcccc------ccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccC
Q 004998 300 LLFELFC---PFSTGE----EKTRTMSSLRHRVLPPQLL------LKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLN 365 (720)
Q Consensus 300 ll~eLlt---pf~~~~----~~~~~~~~l~~~~~p~~~~------~~~p-~~~~li~~~L~~dP~~Rpta~eiL~hp~~~ 365 (720)
++|+|++ ||.... ........+... .++.+. ..++ ...+|+.+||+++|.+|||+.|++.||||.
T Consensus 192 il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~~~ 270 (287)
T cd06621 192 TLLEVAQNRFPFPPEGEPPLGPIELLSYIVNM-PNPELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWIK 270 (287)
T ss_pred HHHHHHhCCCCCCcccCCCCChHHHHHHHhcC-CchhhccCCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhCcccc
Confidence 9999999 554431 112222222221 111111 1222 345999999999999999999999999997
Q ss_pred CCccc
Q 004998 366 EPRDS 370 (720)
Q Consensus 366 ~~~~~ 370 (720)
.....
T Consensus 271 ~~~~~ 275 (287)
T cd06621 271 AQMKK 275 (287)
T ss_pred ccccc
Confidence 76443
No 184
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=99.96 E-value=2.7e-29 Score=261.71 Aligned_cols=212 Identities=16% Similarity=0.235 Sum_probs=160.2
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|++++||||+++++ ++.+.. .++++||| .|++|.+++.+.. ++++..++.++.||+.||.|||++|
T Consensus 49 ~~~~e~~~l~~l~h~~iv~~~~-~~~~~~---~~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~ql~~al~~LH~~~ 123 (268)
T cd06630 49 ALRKEIRLMARLNHPHIIRMLG-ATCEDS---HFNLFVEWMAGGSVSHLLSKYG-AFKEAVIINYTEQLLRGLSYLHENQ 123 (268)
T ss_pred HHHHHHHHHHHcCCCceehhhc-eeccCC---eEEEEEeccCCCcHHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3347888999999999999999 444443 57999999 9999999995543 5899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCC-ceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004998 142 IVVHNVRPSCFVMSSFN-HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~-~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
++|+||||+||+++.++ .++|+|||.+.......... .+
T Consensus 124 i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~~~-----------------------------~~----------- 163 (268)
T cd06630 124 IIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTGA-----------------------------GE----------- 163 (268)
T ss_pred eecCCCCHHHEEEcCCCCEEEEcccccccccccccccC-----------------------------Cc-----------
Confidence 99999999999998765 58999988874332110000 00
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhh
Q 004998 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
......|+..|+|||.+.+..++.++|||||||+
T Consensus 164 ----------------------------------------------~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~ 197 (268)
T cd06630 164 ----------------------------------------------FQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCV 197 (268)
T ss_pred ----------------------------------------------cccccccccceeCHhHhccCCCCcccchHHHHHH
Confidence 0011357889999999988889999999999999
Q ss_pred hhhccc---cCCCCch--HHHHHHHhhcCCCCcccccc-CchHHHHHHHcCCCCCCCCCChHHHHcCcccC
Q 004998 301 LFELFC---PFSTGEE--KTRTMSSLRHRVLPPQLLLK-FPKEASFCLWLLHPEPSGRPKMGELLQSEFLN 365 (720)
Q Consensus 301 l~eLlt---pf~~~~~--~~~~~~~l~~~~~p~~~~~~-~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~ 365 (720)
+|+|++ ||..... .......+.....++..... .+...+|+.+||..+|.+||++.++++||||.
T Consensus 198 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~~~~~ 268 (268)
T cd06630 198 IIEMATAKPPWNAEKHSNHLALIFKIASATTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKHPVFR 268 (268)
T ss_pred HHHHHhCCCCCCCCCCcchHHHHHHHhccCCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcCcccC
Confidence 999999 5543221 12222222222223333333 34556999999999999999999999999985
No 185
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=99.96 E-value=3e-29 Score=265.49 Aligned_cols=204 Identities=15% Similarity=0.160 Sum_probs=161.8
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++||||+++++ ++..+. .+|++||| .+++|.+++... ..+++..++.++.||+.||.|||+.|
T Consensus 47 ~~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~~v~e~~~~~~L~~~~~~~-~~l~~~~~~~~~~qil~~l~~lH~~~ 121 (290)
T cd05580 47 HVLNEKRILQSIRHPFLVNLYG-SFQDDS---NLYLVMEYVPGGELFSHLRKS-GRFPEPVARFYAAQVVLALEYLHSLD 121 (290)
T ss_pred HHHHHHHHHHhCCCCCccceee-EEEcCC---eEEEEEecCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3446778999999999999999 444443 57999999 699999999554 45999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+|+||+|+||+++.++.++|+|||++......
T Consensus 122 i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~----------------------------------------------- 154 (290)
T cd05580 122 IVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR----------------------------------------------- 154 (290)
T ss_pred EecCCCCHHHEEECCCCCEEEeeCCCccccCCC-----------------------------------------------
Confidence 999999999999999999999999877322100
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
.....|++.|+|||.+.+..++.++||||||+++
T Consensus 155 ----------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 188 (290)
T cd05580 155 ----------------------------------------------TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILI 188 (290)
T ss_pred ----------------------------------------------CCCCCCCccccChhhhcCCCCCccccHHHHHHHH
Confidence 0013578899999999888889999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccc-cCchHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCC
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 367 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~-~~p~~~~li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~ 367 (720)
|+|++ ||...... .....+..... .++. ..+...+++.+||..||.+|+ +++|+++||||...
T Consensus 189 ~~l~~g~~p~~~~~~~-~~~~~~~~~~~--~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~ 260 (290)
T cd05580 189 YEMLAGYPPFFDDNPI-QIYEKILEGKV--RFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWFAGI 260 (290)
T ss_pred HHHHhCCCCCCCCCHH-HHHHHHhcCCc--cCCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcCcccccC
Confidence 99999 66554432 23333332221 1122 234556999999999999999 89999999999775
No 186
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.96 E-value=9e-30 Score=277.40 Aligned_cols=208 Identities=22% Similarity=0.224 Sum_probs=166.7
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..++..++|||||++|. +.+... .+|+|||| .+|.|+++|.+.++ +.+.+++.+|.|++.||+|||+++||
T Consensus 103 ~rev~imk~l~HPnIvkl~~-v~~t~~---~lylV~eya~~ge~~~yl~~~gr-~~e~~ar~~F~q~vsaveYcH~k~iv 177 (596)
T KOG0586|consen 103 GREVDIMKSLNHPNIVKLFS-VIETEA---TLYLVMEYASGGELFDYLVKHGR-MKEKEARAKFRQIVSAVEYCHSKNIV 177 (596)
T ss_pred HHHHHHHHhcCCcceeeeee-eeeecc---eeEEEEEeccCchhHHHHHhccc-chhhhhhhhhHHHHHHHHHHhhccee
Confidence 38899999999999999999 666554 57999999 99999999977776 77799999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
|||||.+||||+.+.++||+|||++..+.....
T Consensus 178 HrdLk~eNilL~~~mnikIaDfgfS~~~~~~~~----------------------------------------------- 210 (596)
T KOG0586|consen 178 HRDLKAENILLDENMNIKIADFGFSTFFDYGLM----------------------------------------------- 210 (596)
T ss_pred ccccchhhcccccccceeeeccccceeeccccc-----------------------------------------------
Confidence 999999999999999999999988743321100
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCC-Cccccchhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYRLGVLLF 302 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~-s~~sDIwSLGvll~ 302 (720)
....+|++.|.|||++.+..| ++.+|+||||++||
T Consensus 211 --------------------------------------------lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly 246 (596)
T KOG0586|consen 211 --------------------------------------------LQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLY 246 (596)
T ss_pred --------------------------------------------ccccCCCCCccChHhhcCcccCCcceehhhhhhhhe
Confidence 012589999999999999985 78999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCccc
Q 004998 303 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
-|++ ||++..-..---..++....-|.+ ...+..++|.++|.++|.+|+++++++.|.|+......
T Consensus 247 ~LV~GsLPFDG~~lk~Lr~rvl~gk~rIp~~--ms~dce~lLrk~lvl~Pskr~~~dqim~~~W~n~~~~~ 315 (596)
T KOG0586|consen 247 ALVEGSLPFDGQNLKELRPRVLRGKYRIPFY--MSCDCEDLLRKFLVLNPSKRGPCDQIMKDRWRNDLLEA 315 (596)
T ss_pred eeeecccccCCcccccccchheeeeecccce--eechhHHHHHHhhccCccccCCHHHhhhhcccchhhhh
Confidence 9999 888754332212222222111211 12334589999999999999999999999999876443
No 187
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.96 E-value=2.2e-29 Score=265.55 Aligned_cols=211 Identities=14% Similarity=0.144 Sum_probs=160.3
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC--CCCCCHHHHHHHHHHHHHHHHHHHH-
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP--KRSVDVYECLHIFRQIVEIVYAAHS- 139 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~--~~~l~~~~~~~i~~QIl~aL~yLHs- 139 (720)
..+|..+|.+++||||+++++ .+.... .+|++||| .|++|.+++... ...+++..++.++.||+.||.|||+
T Consensus 46 ~~~e~~~l~~~~~~~i~~~~~-~~~~~~---~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~ 121 (286)
T cd06622 46 IIMELDILHKAVSPYIVDFYG-AFFIEG---AVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEE 121 (286)
T ss_pred HHHHHHHHHhcCCCcHHhhhh-heecCC---eEEEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhc
Confidence 346777899999999999999 444432 67999999 899999988553 2358999999999999999999997
Q ss_pred cCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004998 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
.||+|+||||+||+++.++.++|+|||.+.......
T Consensus 122 ~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~-------------------------------------------- 157 (286)
T cd06622 122 HNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASL-------------------------------------------- 157 (286)
T ss_pred CCEeeCCCCHHHEEECCCCCEEEeecCCcccccCCc--------------------------------------------
Confidence 599999999999999999999999988773221000
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC------CCcccc
Q 004998 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP------VSCASD 293 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~------~s~~sD 293 (720)
.....|++.|+|||.+.+.. ++.++|
T Consensus 158 ------------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~D 189 (286)
T cd06622 158 ------------------------------------------------AKTNIGCQSYMAPERIKSGGPNQNPTYTVQSD 189 (286)
T ss_pred ------------------------------------------------cccCCCccCccCcchhcCCCCCccCCCCcccc
Confidence 00124688899999985543 588999
Q ss_pred chhhhhhhhhccc---cCCCCchH--HHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004998 294 IYRLGVLLFELFC---PFSTGEEK--TRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 294 IwSLGvll~eLlt---pf~~~~~~--~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
||||||++|+|++ ||...... ......+.....+.......+...+|+.+||+.+|.+||++.++++||||....
T Consensus 190 iwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~~~~~~~ 269 (286)
T cd06622 190 VWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDPPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHPWLVKYK 269 (286)
T ss_pred hHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcCCCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcChhhhhcc
Confidence 9999999999999 66543222 122223333333332222334455999999999999999999999999998774
Q ss_pred cc
Q 004998 369 DS 370 (720)
Q Consensus 369 ~~ 370 (720)
..
T Consensus 270 ~~ 271 (286)
T cd06622 270 NA 271 (286)
T ss_pred CC
Confidence 43
No 188
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.96 E-value=1.3e-29 Score=269.59 Aligned_cols=209 Identities=14% Similarity=0.183 Sum_probs=161.0
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..|..+++.++||||+++++ .+..+. .+|+|||| .+++|.+++.+. .+++..+..++.|++.||.|||+.||+
T Consensus 64 ~~e~~~l~~~~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~l~~~L~~LH~~~i~ 137 (297)
T cd06656 64 INEILVMRENKNPNIVNYLD-SYLVGD---ELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALDFLHSNQVI 137 (297)
T ss_pred HHHHHHHHhCCCCCEeeEEE-EEecCC---EEEEeecccCCCCHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 46777899999999999999 444433 67999999 899999998543 389999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.++|+|||.+........
T Consensus 138 H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~----------------------------------------------- 170 (297)
T cd06656 138 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS----------------------------------------------- 170 (297)
T ss_pred cCCCCHHHEEECCCCCEEECcCccceEccCCcc-----------------------------------------------
Confidence 999999999999999999999987732211000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......|++.|+|||.+.+..++.++|||||||++|+
T Consensus 171 -------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~ 207 (297)
T cd06656 171 -------------------------------------------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIE 207 (297)
T ss_pred -------------------------------------------CcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHH
Confidence 0001357889999999998889999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004998 304 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
|++ ||...............+..+.......+ ...+|+.+||..+|.+||++.++++||||.....
T Consensus 208 l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~ 277 (297)
T cd06656 208 MVEGEPPYLNENPLRALYLIATNGTPELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFLKLAKP 277 (297)
T ss_pred HHhCCCCCCCCCcchheeeeccCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhccccc
Confidence 999 66544332222222222222212222333 3459999999999999999999999999987643
No 189
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.96 E-value=2.7e-29 Score=268.66 Aligned_cols=220 Identities=16% Similarity=0.159 Sum_probs=160.4
Q ss_pred eeeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004998 62 LRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 62 ~r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
-+...|..+++.++||||+++++ ++.... .+|++||| .+++|.+++.. ....+++..+..++.||+.||.|||+
T Consensus 44 ~~~~~Ei~~l~~l~h~~i~~~~~-~~~~~~---~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~ 119 (314)
T cd08216 44 KLLQQEIITSRQLQHPNILPYVT-SFIVDS---ELYVVSPLMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHS 119 (314)
T ss_pred HHHHHHHHHHHhcCCcchhhhhh-eeecCC---eEEEEEeccCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHH
Confidence 35557788999999999999999 444433 57999999 88999999954 33458999999999999999999999
Q ss_pred cCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004998 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||+||||||+||+++.++.++++||+.+......... .....++
T Consensus 120 ~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~--------------------------~~~~~~~--------- 164 (314)
T cd08216 120 KGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKR--------------------------QRVVHDF--------- 164 (314)
T ss_pred CCeecCCCCcceEEEecCCceEEecCccceeecccccc--------------------------ccccccc---------
Confidence 99999999999999999999999999877432110000 0000000
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC--CCCccccchhh
Q 004998 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA--PVSCASDIYRL 297 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~--~~s~~sDIwSL 297 (720)
.....++..|+|||++.+. .++.++|||||
T Consensus 165 ------------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~ 196 (314)
T cd08216 165 ------------------------------------------------PKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSV 196 (314)
T ss_pred ------------------------------------------------cccccccccccCHHHhcCCCCCCCcchhHHHH
Confidence 0113568889999999764 48899999999
Q ss_pred hhhhhhccc---cCCCCchHHHHHHHhhcCC--------CCcc-----------------------cc-ccCchHHHHHH
Q 004998 298 GVLLFELFC---PFSTGEEKTRTMSSLRHRV--------LPPQ-----------------------LL-LKFPKEASFCL 342 (720)
Q Consensus 298 Gvll~eLlt---pf~~~~~~~~~~~~l~~~~--------~p~~-----------------------~~-~~~p~~~~li~ 342 (720)
||++|||++ ||............+.... .+.. .. ...+...+|+.
T Consensus 197 G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 276 (314)
T cd08216 197 GITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVE 276 (314)
T ss_pred HHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHH
Confidence 999999998 6655443333222222110 0000 00 00123448999
Q ss_pred HcCCCCCCCCCChHHHHcCcccCCCc
Q 004998 343 WLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 343 ~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
+||.+||++|||+.++|+||||+...
T Consensus 277 ~~l~~~P~~Rpt~~~ll~~p~~~~~~ 302 (314)
T cd08216 277 LCLQRDPESRPSASQLLNHSFFKQCK 302 (314)
T ss_pred HHhhcCCCcCcCHHHHhcCchHhhhc
Confidence 99999999999999999999998764
No 190
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.96 E-value=4e-29 Score=266.23 Aligned_cols=221 Identities=15% Similarity=0.159 Sum_probs=158.5
Q ss_pred eehhhhcccCCCCCceecccceeecCC----CCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEA----AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~----~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
.+|..++..++||||+++++.++.... ....+|++|||.+++|..++......+++..++.++.||+.||.|||++
T Consensus 55 ~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~lv~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~ 134 (311)
T cd07866 55 LREIKILKKLKHPNVVPLIDMAVERPDKSKRKRGSVYMVTPYMDHDLSGLLENPSVKLTESQIKCYMLQLLEGINYLHEN 134 (311)
T ss_pred HHHHHHHHhcCCCCccchhhheecccccccccCceEEEEEecCCcCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 467779999999999999995543332 1335799999977789988866555699999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004998 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+|+||||+||+++.++.++|+|||++.......... ..+
T Consensus 135 ~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~------------------------------~~~--------- 175 (311)
T cd07866 135 HILHRDIKAANILIDNQGILKIADFGLARPYDGPPPNP------------------------------KGG--------- 175 (311)
T ss_pred CeecCCCCHHHEEECCCCCEEECcCccchhccCCCccc------------------------------ccC---------
Confidence 99999999999999999999999999885432210000 000
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-CCCccccchhhhh
Q 004998 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGV 299 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGv 299 (720)
........+...|++.|+|||.+.+. .++.++|||||||
T Consensus 176 ----------------------------------------~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~ 215 (311)
T cd07866 176 ----------------------------------------GGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGC 215 (311)
T ss_pred ----------------------------------------CcccccccccceeccCcCChHHhhCCCccCchhHhHHHHH
Confidence 00000011224679999999998765 4899999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhh--cCC----------------------CCcc----ccccCchHHHHHHHcCCCC
Q 004998 300 LLFELFC---PFSTGEEKTRTMSSLR--HRV----------------------LPPQ----LLLKFPKEASFCLWLLHPE 348 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~--~~~----------------------~p~~----~~~~~p~~~~li~~~L~~d 348 (720)
++|||++ ||.............. ... .++. +....+...+|+.+||..|
T Consensus 216 il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~ 295 (311)
T cd07866 216 VFAEMFTRRPILQGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLD 295 (311)
T ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccC
Confidence 9999999 4443332211111110 000 0111 1112244569999999999
Q ss_pred CCCCCChHHHHcCccc
Q 004998 349 PSGRPKMGELLQSEFL 364 (720)
Q Consensus 349 P~~Rpta~eiL~hp~~ 364 (720)
|.+|||+.|++.||||
T Consensus 296 p~~R~t~~ell~~~~f 311 (311)
T cd07866 296 PYKRLTASDALEHPYF 311 (311)
T ss_pred cccCcCHHHHhcCCCC
Confidence 9999999999999998
No 191
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=99.96 E-value=1.5e-29 Score=278.11 Aligned_cols=203 Identities=18% Similarity=0.198 Sum_probs=152.9
Q ss_pred eehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC----------------------------
Q 004998 65 HSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---------------------------- 114 (720)
Q Consensus 65 ~~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~---------------------------- 114 (720)
.+|..+++.+ +|||||++++ .+.... .+|++||| .+++|.+++.+.
T Consensus 89 ~~E~~il~~l~~h~nIv~~~~-~~~~~~---~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (374)
T cd05106 89 MSELKILSHLGQHKNIVNLLG-ACTHGG---PVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEK 164 (374)
T ss_pred HHHHHHHHhhccCCceeeEee-EecCCC---CeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhc
Confidence 3677888888 8999999999 444433 67999999 999999998432
Q ss_pred -----------------------------------------CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEE
Q 004998 115 -----------------------------------------KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFV 153 (720)
Q Consensus 115 -----------------------------------------~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NIL 153 (720)
..++++.+++.|+.||+.||.|||++||+||||||+|||
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil 244 (374)
T cd05106 165 KYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVL 244 (374)
T ss_pred ccccccccccccccccccccCCccccccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEE
Confidence 124788899999999999999999999999999999999
Q ss_pred EccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccCCCccc
Q 004998 154 MSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYG 233 (720)
Q Consensus 154 l~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~ 233 (720)
++.++.++|+|||++....... .+
T Consensus 245 ~~~~~~~kL~DfGla~~~~~~~---------------------------------~~----------------------- 268 (374)
T cd05106 245 LTDGRVAKICDFGLARDIMNDS---------------------------------NY----------------------- 268 (374)
T ss_pred EeCCCeEEEeeceeeeeccCCc---------------------------------ce-----------------------
Confidence 9999999999998874321110 00
Q ss_pred cccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhccc----cCC
Q 004998 234 THVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC----PFS 309 (720)
Q Consensus 234 ~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt----pf~ 309 (720)
. ......+++.|+|||++.+..++.++|||||||++|||++ ||.
T Consensus 269 -------------------------------~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~ 316 (374)
T cd05106 269 -------------------------------V-VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYP 316 (374)
T ss_pred -------------------------------e-eccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCc
Confidence 0 0000234677999999988889999999999999999985 665
Q ss_pred CCchHHHHHHHhhcCCCCcccccc-CchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 310 TGEEKTRTMSSLRHRVLPPQLLLK-FPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 310 ~~~~~~~~~~~l~~~~~p~~~~~~-~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
...........+..+. .+..+.. .+...+++.+||+.||.+|||+.++++
T Consensus 317 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~ 367 (374)
T cd05106 317 GILVNSKFYKMVKRGY-QMSRPDFAPPEIYSIMKMCWNLEPTERPTFSQISQ 367 (374)
T ss_pred cccccHHHHHHHHccc-CccCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 5433323333333322 2222222 355569999999999999999999976
No 192
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=99.96 E-value=4.3e-29 Score=266.60 Aligned_cols=205 Identities=17% Similarity=0.164 Sum_probs=158.9
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.+|..++..++||||+++++ ++.+.. ..|+||||..++|.+++......+++..+..++.||+.||.|||++||+|
T Consensus 63 ~~Ei~~l~~l~h~niv~~~~-~~~~~~---~~~lv~e~~~g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H 138 (307)
T cd06607 63 IKEVRFLQQLRHPNTIEYKG-CYLREH---TAWLVMEYCLGSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHERIH 138 (307)
T ss_pred HHHHHHHHhCCCCCEEEEEE-EEEeCC---eEEEEHHhhCCCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCCcee
Confidence 36777899999999999999 554443 57999999667888888554456999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
+||+|+||+++.++.++|+|||.+......
T Consensus 139 ~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~-------------------------------------------------- 168 (307)
T cd06607 139 RDIKAGNILLTEPGTVKLADFGSASLVSPA-------------------------------------------------- 168 (307)
T ss_pred cCCCcccEEECCCCCEEEeecCcceecCCC--------------------------------------------------
Confidence 999999999999999999988876221000
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCcccc---CCCCCccccchhhhhhh
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA---GAPVSCASDIYRLGVLL 301 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~---~~~~s~~sDIwSLGvll 301 (720)
....|++.|+|||++. ...++.++|||||||++
T Consensus 169 --------------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il 204 (307)
T cd06607 169 --------------------------------------------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITC 204 (307)
T ss_pred --------------------------------------------CCccCCccccCceeeeccCCCCCCcccchHHHHHHH
Confidence 0135678899999984 34488999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccccCch-HHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~-~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
|||++ ||........ ...+.....+......++. ..+|+.+||..+|++||++.+++.||||....
T Consensus 205 ~el~tg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 274 (307)
T cd06607 205 IELAERKPPLFNMNAMSA-LYHIAQNDSPTLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHRFVLRER 274 (307)
T ss_pred HHHHcCCCCCCCccHHHH-HHHHhcCCCCCCCchhhCHHHHHHHHHHhcCChhhCcCHHHHhcChhhcccC
Confidence 99999 4544333322 2223333233222233444 45999999999999999999999999998764
No 193
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=99.96 E-value=3.2e-29 Score=260.06 Aligned_cols=203 Identities=18% Similarity=0.230 Sum_probs=157.1
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|..++++++||||+++++ .+.... .+|++||| .+++|.+++......+++.+++.++.||+.||.|||++||+|
T Consensus 49 ~e~~~l~~~~h~~i~~~~~-~~~~~~---~~~l~~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h 124 (262)
T cd06613 49 QEISMLKECRHPNIVAYFG-SYLRRD---KLWIVMEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIH 124 (262)
T ss_pred HHHHHHHhCCCCChhceEE-EEEeCC---EEEEEEeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCcee
Confidence 6677899999999999999 444433 58999999 889999999665456999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
+||||+||+++.++.++|+|||.+........
T Consensus 125 ~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~------------------------------------------------ 156 (262)
T cd06613 125 RDIKGANILLTEDGDVKLADFGVSAQLTATIA------------------------------------------------ 156 (262)
T ss_pred cCCChhhEEECCCCCEEECccccchhhhhhhh------------------------------------------------
Confidence 99999999999999999999887732210000
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC---CCCccccchhhhhhh
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA---PVSCASDIYRLGVLL 301 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~---~~s~~sDIwSLGvll 301 (720)
......++..|+|||.+.+. .++.++|||||||++
T Consensus 157 ------------------------------------------~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l 194 (262)
T cd06613 157 ------------------------------------------KRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITA 194 (262)
T ss_pred ------------------------------------------ccccccCCccccCchhhcccccCCcCchhhhHHHHHHH
Confidence 00013578899999999876 789999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCc-cc--cccC-chHHHHHHHcCCCCCCCCCChHHHHcCcc
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRHRVLPP-QL--LLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEF 363 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~-~~--~~~~-p~~~~li~~~L~~dP~~Rpta~eiL~hp~ 363 (720)
|||++ ||......... ..+....+++ .+ ...+ +...+|+.+||..+|..|||+.+++.|+|
T Consensus 195 ~~~~tg~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~ 262 (262)
T cd06613 195 IELAELQPPMFDLHPMRAL-FLISKSNFPPPKLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQHPF 262 (262)
T ss_pred HHHHhCCCCCCCCCHHHHH-HHHHhccCCCccccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcCCC
Confidence 99999 55544333222 2222222222 11 1122 33459999999999999999999999998
No 194
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=99.96 E-value=2.8e-29 Score=267.08 Aligned_cols=208 Identities=18% Similarity=0.290 Sum_probs=161.2
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..++..++||||+++++ ++..+. ..|++||| .+++|.+++.. ..+++..++.++.||+.||.|||++||+
T Consensus 66 ~~e~~~l~~l~hp~i~~~~~-~~~~~~---~~~iv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~~iv 139 (297)
T cd06659 66 FNEVVIMRDYQHQNVVEMYK-SYLVGE---ELWVLMEFLQGGALTDIVSQ--TRLNEEQIATVCESVLQALCYLHSQGVI 139 (297)
T ss_pred HHHHHHHHhCCCCchhhhhh-heeeCC---eEEEEEecCCCCCHHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 36777899999999999999 444443 57999999 88999998744 2489999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+||+++.++.++|+|||.+........
T Consensus 140 H~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~----------------------------------------------- 172 (297)
T cd06659 140 HRDIKSDSILLTLDGRVKLSDFGFCAQISKDVP----------------------------------------------- 172 (297)
T ss_pred cCCCCHHHeEEccCCcEEEeechhHhhcccccc-----------------------------------------------
Confidence 999999999999999999999988732211100
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......|+..|+|||++.+..++.++|||||||++||
T Consensus 173 -------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e 209 (297)
T cd06659 173 -------------------------------------------KRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIE 209 (297)
T ss_pred -------------------------------------------cccceecCccccCHHHHccCCCCchhhHHHHHHHHHH
Confidence 0001357899999999988889999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCCCCc-ccc-ccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004998 304 LFC---PFSTGEEKTRTMSSLRHRVLPP-QLL-LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~~~p~-~~~-~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
|++ ||...... ..+..+.....+. ... ...+...+|+.+||+.+|.+||++.++++||||.+...
T Consensus 210 l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~~~~~~~~~ 279 (297)
T cd06659 210 MVDGEPPYFSDSPV-QAMKRLRDSPPPKLKNAHKISPVLRDFLERMLTREPQERATAQELLDHPFLLQTGL 279 (297)
T ss_pred HHhCCCCCCCCCHH-HHHHHHhccCCCCccccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhChhhccCCC
Confidence 999 55543332 2333333221111 111 22334569999999999999999999999999987743
No 195
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.96 E-value=3.8e-29 Score=261.81 Aligned_cols=193 Identities=21% Similarity=0.262 Sum_probs=150.1
Q ss_pred CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEE
Q 004998 75 DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFV 153 (720)
Q Consensus 75 ~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NIL 153 (720)
+||||+++++ .+.... .+|+|||| .|++|.+++.... .+++.+++.++.||+.||.|||+.||+||||||+||+
T Consensus 67 ~h~~iv~~~~-~~~~~~---~~~iv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil 141 (267)
T PHA03390 67 DNPNFIKLYY-SVTTLK---GHVLIMDYIKDGDLFDLLKKEG-KLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVL 141 (267)
T ss_pred cCCCEEEEEE-EEecCC---eeEEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEE
Confidence 7999999999 554443 68999999 8999999996544 6999999999999999999999999999999999999
Q ss_pred EccCC-ceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccCCCcc
Q 004998 154 MSSFN-HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAY 232 (720)
Q Consensus 154 l~~~~-~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~ 232 (720)
++.++ .++++|||.+...+..
T Consensus 142 ~~~~~~~~~l~dfg~~~~~~~~---------------------------------------------------------- 163 (267)
T PHA03390 142 YDRAKDRIYLCDYGLCKIIGTP---------------------------------------------------------- 163 (267)
T ss_pred EeCCCCeEEEecCccceecCCC----------------------------------------------------------
Confidence 99888 9999988876322100
Q ss_pred ccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhccc---cCC
Q 004998 233 GTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFS 309 (720)
Q Consensus 233 ~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt---pf~ 309 (720)
....|+..|+|||++.+..++.++|||||||++|||++ ||.
T Consensus 164 ------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~ 207 (267)
T PHA03390 164 ------------------------------------SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFK 207 (267)
T ss_pred ------------------------------------ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCC
Confidence 00246889999999998889999999999999999999 665
Q ss_pred CCchHHHHHHHhhc--CCCCccccccCchHHHHHHHcCCCCCCCCCC-hHHHHcCcccCC
Q 004998 310 TGEEKTRTMSSLRH--RVLPPQLLLKFPKEASFCLWLLHPEPSGRPK-MGELLQSEFLNE 366 (720)
Q Consensus 310 ~~~~~~~~~~~l~~--~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpt-a~eiL~hp~~~~ 366 (720)
...........+.. ....+.+....+...+||.+||+++|.+||+ ++++|+||||..
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h~~~~~ 267 (267)
T PHA03390 208 EDEDEELDLESLLKRQQKKLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKHPFLKI 267 (267)
T ss_pred CCCcchhhHHHHHHhhcccCCcccccCHHHHHHHHHHhccChhhCCchHHHHhcCCcccC
Confidence 33221111111111 1111222234456669999999999999996 699999999963
No 196
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=99.96 E-value=5.5e-29 Score=265.55 Aligned_cols=221 Identities=16% Similarity=0.181 Sum_probs=161.8
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|..++..++||||+++++ .+..+. .+|++||| .|++|.+++...+ .+++..+..++.||+.||.|||+.||+|
T Consensus 50 ~e~~~l~~~~~~~i~~~~~-~~~~~~---~~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~i~H 124 (305)
T cd05609 50 VERDILTFAENPFVVSMFC-SFETKR---HLCMVMEYVEGGDCATLLKNIG-ALPVDMARMYFAETVLALEYLHNYGIVH 124 (305)
T ss_pred HHHHHHHhCCCCCeeeeEE-EEecCC---EEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 5677889999999999998 444433 67999999 8999999995543 5899999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+||+++.++.++++|||.+......... .+ .+.....
T Consensus 125 ~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~-~~---------------------------~~~~~~~---------- 166 (305)
T cd05609 125 RDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTT-NL---------------------------YEGHIEK---------- 166 (305)
T ss_pred cCCchHHEEECCCCCEEEeeCCCccccCcCccc-cc---------------------------ccccccc----------
Confidence 999999999999999999999987421110000 00 0000000
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhc
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 304 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eL 304 (720)
...........|+..|+|||.+.+..++.++|||||||++|||
T Consensus 167 -------------------------------------~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el 209 (305)
T cd05609 167 -------------------------------------DTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEF 209 (305)
T ss_pred -------------------------------------chhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHH
Confidence 0000000113578899999999888899999999999999999
Q ss_pred cc---cCCCCchHHHHHHHhhcCCC-CccccccCc-hHHHHHHHcCCCCCCCCCC---hHHHHcCcccCCC
Q 004998 305 FC---PFSTGEEKTRTMSSLRHRVL-PPQLLLKFP-KEASFCLWLLHPEPSGRPK---MGELLQSEFLNEP 367 (720)
Q Consensus 305 lt---pf~~~~~~~~~~~~l~~~~~-p~~~~~~~p-~~~~li~~~L~~dP~~Rpt---a~eiL~hp~~~~~ 367 (720)
++ ||.+.... ........... .+......+ ...+||.+||+++|++||+ +.++|+||||...
T Consensus 210 ~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~~~~~~ 279 (305)
T cd05609 210 LVGCVPFFGDTPE-ELFGQVISDDIEWPEGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRFFLGL 279 (305)
T ss_pred HhCCCCCCCCCHH-HHHHHHHhcccCCCCccccCCHHHHHHHHHHhccChhhccCccCHHHHHhCccccCC
Confidence 99 66654333 33333333221 122222333 4569999999999999997 7999999999775
No 197
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=99.96 E-value=2.4e-29 Score=266.93 Aligned_cols=208 Identities=19% Similarity=0.323 Sum_probs=161.5
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..++..++||||+++++ .+..+. ..|++||| .+++|.+++... .+++.+++.++.||+.||.|||++||+
T Consensus 67 ~~e~~~l~~l~h~~ii~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~--~l~~~~~~~~~~qi~~~l~~LH~~~iv 140 (292)
T cd06658 67 FNEVVIMRDYHHENVVDMYN-SYLVGD---ELWVVMEFLEGGALTDIVTHT--RMNEEQIATVCLSVLRALSYLHNQGVI 140 (292)
T ss_pred HHHHHHHHhCCCCcHHHHHH-heecCC---eEEEEEeCCCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCEe
Confidence 36778899999999999999 444433 67999999 889999988443 389999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+||+++.++.++|+|||++...... .
T Consensus 141 H~dlkp~Nill~~~~~~kL~dfg~~~~~~~~-----------------------------------~------------- 172 (292)
T cd06658 141 HRDIKSDSILLTSDGRIKLSDFGFCAQVSKE-----------------------------------V------------- 172 (292)
T ss_pred ecCCCHHHEEEcCCCCEEEccCcchhhcccc-----------------------------------c-------------
Confidence 9999999999999999999999877322100 0
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
+ ......|++.|+|||.+.+..++.++|||||||++||
T Consensus 173 -----------------------------------------~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~e 210 (292)
T cd06658 173 -----------------------------------------P-KRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIE 210 (292)
T ss_pred -----------------------------------------c-cCceeecCccccCHHHHccCCCCchhhHHHHHHHHHH
Confidence 0 0001357899999999988889999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCCCCcccc---ccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCccc
Q 004998 304 LFC---PFSTGEEKTRTMSSLRHRVLPPQLL---LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~~~p~~~~---~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
|++ ||...... ..+..+... .++.+. ...+...+|+.+||..||.+|||+.++++||||.....+
T Consensus 211 l~~g~~p~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~~~~~~~ 281 (292)
T cd06658 211 MIDGEPPYFNEPPL-QAMRRIRDN-LPPRVKDSHKVSSVLRGFLDLMLVREPSQRATAQELLQHPFLKLAGPP 281 (292)
T ss_pred HHhCCCCCCCCCHH-HHHHHHHhc-CCCccccccccCHHHHHHHHHHccCChhHCcCHHHHhhChhhhccCCc
Confidence 999 56544332 223333322 222211 223445699999999999999999999999999976443
No 198
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=99.96 E-value=5.1e-29 Score=263.28 Aligned_cols=207 Identities=19% Similarity=0.339 Sum_probs=163.1
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..++..++||||+++++ .+.... ..|+++|| .|++|.+++.. ..+++.+++.++.||+.||.|||++||+
T Consensus 64 ~~e~~~l~~~~h~~vv~~~~-~~~~~~---~~~~v~e~~~~~~L~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~~i~ 137 (285)
T cd06648 64 FNEVVIMRDYQHPNIVEMYS-SYLVGD---ELWVVMEFLEGGALTDIVTH--TRMNEEQIATVCLAVLKALSFLHAQGVI 137 (285)
T ss_pred HHHHHHHHHcCCCChheEEE-EEEcCC---eEEEEEeccCCCCHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 36777899999999999999 444433 57999999 89999999965 3489999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||+|+||+++.++.++|+|||.+.......
T Consensus 138 H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~------------------------------------------------ 169 (285)
T cd06648 138 HRDIKSDSILLTSDGRVKLSDFGFCAQVSKEV------------------------------------------------ 169 (285)
T ss_pred cCCCChhhEEEcCCCcEEEcccccchhhccCC------------------------------------------------
Confidence 99999999999999999999988763211100
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
+ ......|++.|+|||.+.+..++.++|||||||++||
T Consensus 170 -----------------------------------------~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~e 207 (285)
T cd06648 170 -----------------------------------------P-RRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIE 207 (285)
T ss_pred -----------------------------------------c-ccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHH
Confidence 0 0001357899999999988889999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCCCCccccc---cCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004998 304 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLL---KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~~~p~~~~~---~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
|++ ||...... ..+..+.... ++.... ..+...+|+.+||+++|++||++.++++||||.....
T Consensus 208 ll~g~~p~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~ 277 (285)
T cd06648 208 MVDGEPPYFNEPPL-QAMKRIRDNL-PPKLKNLHKVSPRLRSFLDRMLVRDPAQRATAAELLNHPFLAKAGP 277 (285)
T ss_pred HHhCCCCCcCCCHH-HHHHHHHhcC-CCCCcccccCCHHHHHHHHHHcccChhhCcCHHHHccCcccccCCC
Confidence 999 66554332 3344444432 222111 2345569999999999999999999999999988754
No 199
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.96 E-value=8.2e-29 Score=264.80 Aligned_cols=207 Identities=16% Similarity=0.150 Sum_probs=160.1
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
...|..+++.++||||+++++ ++.... ..++||||..++|.+++......+++..+..++.||+.||.|||+.|++
T Consensus 62 ~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~ 137 (308)
T cd06634 62 IIKEVRFLQKLRHPNTIQYRG-CYLREH---TAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMI 137 (308)
T ss_pred HHHHHHHHHhCCCCCcccEEE-EEEcCC---eeEEEEEccCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 336778999999999999999 444432 5799999966789888855555689999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+||+++.++.++++|||.+......
T Consensus 138 H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~------------------------------------------------- 168 (308)
T cd06634 138 HRDVKAGNILLSEPGLVKLGDFGSASIMAPA------------------------------------------------- 168 (308)
T ss_pred cCCCCHHhEEECCCCcEEECCcccceeecCc-------------------------------------------------
Confidence 9999999999999999999888876221000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC---CCCCccccchhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG---APVSCASDIYRLGVL 300 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~---~~~s~~sDIwSLGvl 300 (720)
....|++.|+|||.+.+ ..++.++|||||||+
T Consensus 169 ---------------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~i 203 (308)
T cd06634 169 ---------------------------------------------NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT 203 (308)
T ss_pred ---------------------------------------------ccccCCccccCHHHHhhcccCCCCcccchHHHHHH
Confidence 01356889999999853 447889999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004998 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
+|+|++ ||........ ...+.....+......++ ...+||.+||.++|.+||++.+++.|||+.....
T Consensus 204 l~el~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~~~~ 275 (308)
T cd06634 204 CIELAERKPPLFNMNAMSA-LYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERP 275 (308)
T ss_pred HHHHHcCCCCCccccHHHH-HHHHhhcCCCCcCcccccHHHHHHHHHHhhCCcccCCCHHHHhhCccccccCC
Confidence 999998 5544433322 223333333333233344 3459999999999999999999999999998644
No 200
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=99.96 E-value=5.1e-29 Score=258.87 Aligned_cols=203 Identities=16% Similarity=0.211 Sum_probs=155.9
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..|..++.+++||||+++++ ++.... .++++||| .+++|.+++......+++..++.++.||+.||.|||+.||+
T Consensus 47 ~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~ 122 (256)
T cd05113 47 IEEAKVMMKLSHEKLVQLYG-VCTKQR---PIYIVTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFI 122 (256)
T ss_pred HHHHHHHhcCCCCCeeeEEE-EEccCC---CcEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 35778899999999999999 554433 57999999 88999999965544689999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
|+||||+||+++.++.+||+|||.+.....+. +
T Consensus 123 H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~----------------------------------~------------- 155 (256)
T cd05113 123 HRDLAARNCLVDDQGCVKVSDFGLSRYVLDDE----------------------------------Y------------- 155 (256)
T ss_pred ccccCcceEEEcCCCCEEECCCccceecCCCc----------------------------------e-------------
Confidence 99999999999999999999988763321100 0
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
. ......++..|+|||.+.+..++.++|||||||++|+
T Consensus 156 -----------------------~-------------------~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~ 193 (256)
T cd05113 156 -----------------------T-------------------SSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWE 193 (256)
T ss_pred -----------------------e-------------------ecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHH
Confidence 0 0000234678999999988889999999999999999
Q ss_pred ccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004998 304 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 304 Llt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~h 361 (720)
|++ ||...... .....+.....++......+...+++.+||+++|.+||++.+|+.+
T Consensus 194 l~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~ 254 (256)
T cd05113 194 VYSLGKMPYERFNNS-ETVEKVSQGLRLYRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSS 254 (256)
T ss_pred HhcCCCCCcCcCCHH-HHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHh
Confidence 997 55443332 3333344333332222233455699999999999999999999863
No 201
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=2.8e-29 Score=272.53 Aligned_cols=242 Identities=19% Similarity=0.227 Sum_probs=171.3
Q ss_pred ccccccCCcccccccccCCC------CCCccccccccccCCCCccceeeeehhhhcccCCCCCceecccceeecCCCCCc
Q 004998 22 AWQDSDSSRALNISGVSDRN------PRLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDP 95 (720)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~ 95 (720)
|..+++..+.+|.++++... ...++++|........ ......|..+|++++|||+|+|+| +|.+... .
T Consensus 73 AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~---~~eF~~Ei~~ls~l~H~Nlv~LlG-yC~e~~~--~ 146 (361)
T KOG1187|consen 73 ATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQG---EREFLNEVEILSRLRHPNLVKLLG-YCLEGGE--H 146 (361)
T ss_pred HHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcc---hhHHHHHHHHHhcCCCcCcccEEE-EEecCCc--e
Confidence 44566666667777665522 2333444322222211 122447888999999999999999 5654432 4
Q ss_pred EEEEEec-CCCCHHHHHhCCCC-CCCHHHHHHHHHHHHHHHHHHHHc---CceeccCCCCcEEEccCCceEEeccCcccC
Q 004998 96 FVHAIEW-GDVSLRQWLDKPKR-SVDVYECLHIFRQIVEIVYAAHSQ---GIVVHNVRPSCFVMSSFNHVSFIESASCSD 170 (720)
Q Consensus 96 ~~lv~E~-~ggsL~~~L~~~~~-~l~~~~~~~i~~QIl~aL~yLHs~---gIvHrDLKP~NILl~~~~~vkliDfg~a~~ 170 (720)
.++|+|| ..|+|.++|..... +++|...+.|+.+++.||+|||.. .||||||||+||||+.+.++||+|||+|+.
T Consensus 147 ~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~ 226 (361)
T KOG1187|consen 147 RLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAKL 226 (361)
T ss_pred EEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCccCccc
Confidence 6999999 88999999955444 799999999999999999999984 499999999999999999999988888732
Q ss_pred CCC-CCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccc
Q 004998 171 SGS-DSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILD 249 (720)
Q Consensus 171 ~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d 249 (720)
... ..
T Consensus 227 ~~~~~~-------------------------------------------------------------------------- 232 (361)
T KOG1187|consen 227 GPEGDT-------------------------------------------------------------------------- 232 (361)
T ss_pred CCcccc--------------------------------------------------------------------------
Confidence 211 00
Q ss_pred cccchhhhhcccCCCCcccccc-ccCCcccCCccccCCCCCccccchhhhhhhhhcccc---CCCCc------hHHHHHH
Q 004998 250 NRVNVEQVEEKKQPFPMKQILL-METNWYASPEELAGAPVSCASDIYRLGVLLFELFCP---FSTGE------EKTRTMS 319 (720)
Q Consensus 250 ~g~~~~~~~~~~~~~~~~~~~~-~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLltp---f~~~~------~~~~~~~ 319 (720)
..... .||.+|+|||.+..+..+.++|||||||+|.||+++ ..... -......
T Consensus 233 -----------------~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~ 295 (361)
T KOG1187|consen 233 -----------------SVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKP 295 (361)
T ss_pred -----------------ceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHH
Confidence 00001 689999999999888899999999999999999993 22211 1111122
Q ss_pred Hhhc----CCCCcccc-ccCc--h----HHHHHHHcCCCCCCCCCChHHHHc
Q 004998 320 SLRH----RVLPPQLL-LKFP--K----EASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 320 ~l~~----~~~p~~~~-~~~p--~----~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
.+.. .++.|.+. ..++ + .+.+..+|++.+|..||++.|+++
T Consensus 296 ~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~ 347 (361)
T KOG1187|consen 296 LLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVK 347 (361)
T ss_pred HHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHH
Confidence 2222 23445544 3444 2 237899999999999999999754
No 202
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=99.96 E-value=6.8e-29 Score=258.16 Aligned_cols=204 Identities=14% Similarity=0.140 Sum_probs=156.7
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..++.+++||||+++++ +++.. .+++|||| .+++|.+++......+++..++.++.||+.||.|||++|+
T Consensus 42 ~~~E~~~l~~l~h~~ii~~~~-~~~~~----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i 116 (257)
T cd05115 42 MMREAEIMHQLDNPYIVRMIG-VCEAE----ALMLVMEMASGGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNF 116 (257)
T ss_pred HHHHHHHHHhcCCCCeEEEEE-EEcCC----CeEEEEEeCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCe
Confidence 346778999999999999999 55432 57999999 8999999996555569999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.+||+|||.+.........
T Consensus 117 ~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~--------------------------------------------- 151 (257)
T cd05115 117 VHRDLAARNVLLVNQHYAKISDFGLSKALGADDSY--------------------------------------------- 151 (257)
T ss_pred eecccchheEEEcCCCcEEeccCCccccccCCccc---------------------------------------------
Confidence 99999999999999999999999887432111000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
.. ......++..|+|||.+.+..++.++|||||||++|
T Consensus 152 ----------------------~~--------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ 189 (257)
T cd05115 152 ----------------------YK--------------------ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMW 189 (257)
T ss_pred ----------------------ee--------------------ccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHH
Confidence 00 000012356899999998888999999999999999
Q ss_pred hccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 303 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 303 eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
||++ ||...... .....+..+..++......+...+++.+||..+|++||++.+|++
T Consensus 190 el~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~ 250 (257)
T cd05115 190 EAFSYGQKPYKKMKGP-EVMSFIEQGKRLDCPAECPPEMYALMKDCWIYKWEDRPNFAKVEE 250 (257)
T ss_pred HHhcCCCCCcCcCCHH-HHHHHHHCCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 9985 55544333 344444444333322333455569999999999999999999875
No 203
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.96 E-value=1.7e-28 Score=263.41 Aligned_cols=205 Identities=16% Similarity=0.165 Sum_probs=159.1
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
...|..+++.++||||+++++ ++..+. ..|++|||..++|.+++.....++++..+..++.||+.||.|||++||+
T Consensus 72 ~~~e~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~ 147 (317)
T cd06635 72 IIKEVKFLQRIKHPNSIEYKG-CYLREH---TAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMI 147 (317)
T ss_pred HHHHHHHHHhCCCCCEEEEEE-EEeeCC---eEEEEEeCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 336778999999999999999 554443 5799999966789888855556699999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||+|+||+++.++.++|+|||.+......
T Consensus 148 H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~------------------------------------------------- 178 (317)
T cd06635 148 HRDIKAGNILLTEPGQVKLADFGSASIASPA------------------------------------------------- 178 (317)
T ss_pred cCCCCcccEEECCCCCEEEecCCCccccCCc-------------------------------------------------
Confidence 9999999999999999999988876221000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCcccc---CCCCCccccchhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA---GAPVSCASDIYRLGVL 300 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~---~~~~s~~sDIwSLGvl 300 (720)
....|++.|+|||.+. ...++.++|||||||+
T Consensus 179 ---------------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvi 213 (317)
T cd06635 179 ---------------------------------------------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT 213 (317)
T ss_pred ---------------------------------------------ccccCCccccChhhhhcCCCCCCCccccHHHHHHH
Confidence 0135688899999984 3458999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
+|||++ ||........ ...+.....++.....++ ...+|+.+||+.+|.+||++.++++|+|+...
T Consensus 214 l~el~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~ 283 (317)
T cd06635 214 CIELAERKPPLFNMNAMSA-LYHIAQNESPTLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLRE 283 (317)
T ss_pred HHHHHhCCCCCCCccHHHH-HHHHHhccCCCCCCccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhcc
Confidence 999999 5544433322 223333333333233333 44599999999999999999999999998765
No 204
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.96 E-value=1.5e-29 Score=247.55 Aligned_cols=222 Identities=14% Similarity=0.187 Sum_probs=166.0
Q ss_pred eeeehhhhcccCCCCCceecccceeecCC----CCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEA----AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~----~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
-.-+|..+|..+.|+|++.+++++-.... ....+|+||.++..+|.-+|......++..++..++.+++.||.|+|
T Consensus 62 talreikiL~~lkHenv~nliEic~tk~Tp~~r~r~t~ylVf~~cehDLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iH 141 (376)
T KOG0669|consen 62 TALREIKILQLLKHENVVNLIEICRTKATPTNRDRATFYLVFDFCEHDLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIH 141 (376)
T ss_pred HHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccceeeeeHHHhhhhHHHHhcCccccccHHHHHHHHHHHHHHHHHHH
Confidence 34478889999999999999983332211 12248999999999999999666566999999999999999999999
Q ss_pred HcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCC
Q 004998 139 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
...|+|||+||+|+||+.+|.+||+|||+++.+....-.
T Consensus 142 r~kilHRDmKaaNvLIt~dgilklADFGlar~fs~~~n~----------------------------------------- 180 (376)
T KOG0669|consen 142 RNKILHRDMKAANVLITKDGILKLADFGLARAFSTSKNV----------------------------------------- 180 (376)
T ss_pred HhhHHhhcccHhhEEEcCCceEEeeccccccceeccccc-----------------------------------------
Confidence 999999999999999999999999888887543211000
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC-CCccccchhh
Q 004998 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRL 297 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSL 297 (720)
.+.+-+..+-|.||++||.+.|.. |+++.|||+.
T Consensus 181 ---------------------------------------------~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgA 215 (376)
T KOG0669|consen 181 ---------------------------------------------VKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGA 215 (376)
T ss_pred ---------------------------------------------CCCCcccceeeeecCCHHHhhcccccCCcchhHhH
Confidence 000112256799999999999876 9999999999
Q ss_pred hhhhhhccc--cCCCCchHHHHHH---HhhcCCCCcccc-------------------------------ccCchHHHHH
Q 004998 298 GVLLFELFC--PFSTGEEKTRTMS---SLRHRVLPPQLL-------------------------------LKFPKEASFC 341 (720)
Q Consensus 298 Gvll~eLlt--pf~~~~~~~~~~~---~l~~~~~p~~~~-------------------------------~~~p~~~~li 341 (720)
|||+.||++ |....+....... .+...+.+..++ ..-+..++|+
T Consensus 216 gCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLl 295 (376)
T KOG0669|consen 216 GCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLL 295 (376)
T ss_pred HHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHH
Confidence 999999999 5433332222222 222211111100 0112446999
Q ss_pred HHcCCCCCCCCCChHHHHcCcccCCCccc
Q 004998 342 LWLLHPEPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 342 ~~~L~~dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
..||..||.+|+.+.++|+|.||....-+
T Consensus 296 e~ll~~DP~kR~~ad~alnh~~F~kdp~p 324 (376)
T KOG0669|consen 296 EKLLKLDPTKRIDADQALNHDFFWKDPMP 324 (376)
T ss_pred HHHhccCcccCcchHhhhchhhhhcCCcc
Confidence 99999999999999999999999886444
No 205
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=99.96 E-value=3.4e-29 Score=261.36 Aligned_cols=208 Identities=16% Similarity=0.181 Sum_probs=155.8
Q ss_pred eehhhhcccC-CCCCceecccceeecCC---CCCcEEEEEec-CCCCHHHHHhCC---CCCCCHHHHHHHHHHHHHHHHH
Q 004998 65 HSDGVELTHG-DHLRNQGGLSGVCENEA---AIDPFVHAIEW-GDVSLRQWLDKP---KRSVDVYECLHIFRQIVEIVYA 136 (720)
Q Consensus 65 ~~e~~~Ls~l-~HpnIV~l~~~~~~~~~---~~~~~~lv~E~-~ggsL~~~L~~~---~~~l~~~~~~~i~~QIl~aL~y 136 (720)
.+|..++.++ +||||+++++ ++.... ....+|++||| .+++|.+++... ...+++..++.++.||+.||.|
T Consensus 50 ~~e~~~l~~~~~h~~i~~~~~-~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~ 128 (275)
T cd06608 50 KEEYNILRKYSNHPNIATFYG-AFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAY 128 (275)
T ss_pred HHHHHHHHHhcCCCChheEEE-EEEecCCCCcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHH
Confidence 3666788887 7999999999 443332 24568999999 889999988432 3568999999999999999999
Q ss_pred HHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCC
Q 004998 137 AHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 216 (720)
Q Consensus 137 LHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~ 216 (720)
||++||+|+||+|+||+++.++.++|+|||.+.......
T Consensus 129 lH~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~----------------------------------------- 167 (275)
T cd06608 129 LHENKVIHRDIKGQNILLTKNAEVKLVDFGVSAQLDSTL----------------------------------------- 167 (275)
T ss_pred HhcCCcccCCCCHHHEEEccCCeEEECCCccceecccch-----------------------------------------
Confidence 999999999999999999999999999988773221000
Q ss_pred CCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-----CCCcc
Q 004998 217 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-----PVSCA 291 (720)
Q Consensus 217 ~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-----~~s~~ 291 (720)
.......|++.|+|||++... .++.+
T Consensus 168 -------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~ 198 (275)
T cd06608 168 -------------------------------------------------GRRNTFIGTPYWMAPEVIACDEQPDASYDAR 198 (275)
T ss_pred -------------------------------------------------hhhcCccccccccCHhHhcccccccCCcccc
Confidence 000013578899999998542 37889
Q ss_pred ccchhhhhhhhhccc---cCCCCchHHHHHHHhhcCCCCccc-cccCc-hHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004998 292 SDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQL-LLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 292 sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~-~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
+|||||||++|+|++ ||........... +.....+... ...++ ...+|+.+||..||++|||+.++++|||+
T Consensus 199 ~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~~~~ 275 (275)
T cd06608 199 SDVWSLGITAIELADGKPPLCDMHPMRALFK-IPRNPPPTLKSPENWSKKFNDFISECLIKNYEQRPFMEELLEHPFI 275 (275)
T ss_pred ccHHHhHHHHHHHHhCCCCccccchHHHHHH-hhccCCCCCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcCCCC
Confidence 999999999999999 6654433322222 2222222111 11133 34599999999999999999999999996
No 206
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=99.96 E-value=3.2e-30 Score=252.42 Aligned_cols=250 Identities=15% Similarity=0.129 Sum_probs=168.2
Q ss_pred cCCcccccccccC-------CCCCCccccccccccCCCCccceeeeehhhhcccCCCCCceecccceeec-CCCCCcEEE
Q 004998 27 DSSRALNISGVSD-------RNPRLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCEN-EAAIDPFVH 98 (720)
Q Consensus 27 ~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~r~~~e~~~Ls~l~HpnIV~l~~~~~~~-~~~~~~~~l 98 (720)
..-+.+|.+|++- .+.+..+-+|+.+... +..-+.-+|+..-++++||||+++++..... .+.....|+
T Consensus 24 ri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~---~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~yl 100 (302)
T KOG2345|consen 24 RIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQ---EDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAYL 100 (302)
T ss_pred EEeeeecCCCceeeeeecccCcccchhhheeeccch---HHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEEE
Confidence 4456677777765 3444455555555431 1222223666778889999999999833322 224456899
Q ss_pred EEec-CCCCHHHHHh---CCCCCCCHHHHHHHHHHHHHHHHHHHHcC--ceeccCCCCcEEEccCCceEEeccCcccCCC
Q 004998 99 AIEW-GDVSLRQWLD---KPKRSVDVYECLHIFRQIVEIVYAAHSQG--IVVHNVRPSCFVMSSFNHVSFIESASCSDSG 172 (720)
Q Consensus 99 v~E~-~ggsL~~~L~---~~~~~l~~~~~~~i~~QIl~aL~yLHs~g--IvHrDLKP~NILl~~~~~vkliDfg~a~~~g 172 (720)
+++| ..|+|.+.+. ..+..+++.+++.||.+|++||.+||+.. ++||||||.|||+++++.+++.|||.++...
T Consensus 101 l~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D~GS~~~a~ 180 (302)
T KOG2345|consen 101 LLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMDLGSATQAP 180 (302)
T ss_pred EeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEeccCccccc
Confidence 9999 9999999993 34446999999999999999999999998 9999999999999999999999999985421
Q ss_pred CCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccCCCcccccccccccccccccccccc
Q 004998 173 SDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRV 252 (720)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~ 252 (720)
..-- ..+ +...+.+.
T Consensus 181 i~i~-----------------------~~~----------------------------------------~a~~lQe~-- 195 (302)
T KOG2345|consen 181 IQIE-----------------------GSR----------------------------------------QALRLQEW-- 195 (302)
T ss_pred eEee-----------------------chH----------------------------------------HHHHHHHH--
Confidence 1100 000 00000000
Q ss_pred chhhhhcccCCCCccccccccCCcccCCccccCCC---CCccccchhhhhhhhhccc---cCCCCchHH--HHHHHhhcC
Q 004998 253 NVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP---VSCASDIYRLGVLLFELFC---PFSTGEEKT--RTMSSLRHR 324 (720)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~---~s~~sDIwSLGvll~eLlt---pf~~~~~~~--~~~~~l~~~ 324 (720)
.....|..|+|||.+.-.. .+.++|||||||+||+|+. ||....... .+.......
T Consensus 196 ----------------a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaLAv~n~q 259 (302)
T KOG2345|consen 196 ----------------AEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLALAVQNAQ 259 (302)
T ss_pred ----------------HHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEEEeeeccc
Confidence 0123488899999996443 7899999999999999998 665421110 001111111
Q ss_pred CCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 325 VLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 325 ~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
...|.-........+|+++||++||.+||++.+++.
T Consensus 260 ~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~ 295 (302)
T KOG2345|consen 260 ISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLS 295 (302)
T ss_pred cccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHH
Confidence 111221222233349999999999999999999986
No 207
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=99.96 E-value=4.7e-29 Score=266.55 Aligned_cols=211 Identities=19% Similarity=0.202 Sum_probs=153.4
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhC----CCCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK----PKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~----~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
.+|..++..++||||+++++ ++.+.. ...+|+||||.+++|.+++.. ....+++..++.++.||+.||.|||++
T Consensus 50 ~~e~~~l~~l~h~~i~~~~~-~~~~~~-~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~ 127 (316)
T cd07842 50 CREIALLRELKHENVVSLVE-VFLEHA-DKSVYLLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSN 127 (316)
T ss_pred HHHHHHHHhcCCCCccceEE-EEeCCC-CceEEEEEeCCCcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhC
Confidence 36778999999999999999 554432 236899999977789888732 123589999999999999999999999
Q ss_pred CceeccCCCCcEEEcc----CCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCC
Q 004998 141 GIVVHNVRPSCFVMSS----FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 216 (720)
Q Consensus 141 gIvHrDLKP~NILl~~----~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~ 216 (720)
||+||||||+||+++. ++.+|++|||++.........
T Consensus 128 ~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~~~~~~~~--------------------------------------- 168 (316)
T cd07842 128 WVLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNAPLKP--------------------------------------- 168 (316)
T ss_pred CEeeCCCCHHHEEEcCCCCccceEEECCCccccccCCCccc---------------------------------------
Confidence 9999999999999998 899999998887432111000
Q ss_pred CCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-CCCccccch
Q 004998 217 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIY 295 (720)
Q Consensus 217 ~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIw 295 (720)
........++++|+|||++.+. .++.++|||
T Consensus 169 ------------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~ 200 (316)
T cd07842 169 ------------------------------------------------LADLDPVVVTIWYRAPELLLGARHYTKAIDIW 200 (316)
T ss_pred ------------------------------------------------ccccCCccccccccCHHHHhCCCCCCcHHHHH
Confidence 0000114678999999998765 489999999
Q ss_pred hhhhhhhhccc---cCCCCchHH------------HHHHHhh------------------------cCCCC-cccc----
Q 004998 296 RLGVLLFELFC---PFSTGEEKT------------RTMSSLR------------------------HRVLP-PQLL---- 331 (720)
Q Consensus 296 SLGvll~eLlt---pf~~~~~~~------------~~~~~l~------------------------~~~~p-~~~~---- 331 (720)
||||++|+|++ ||....... .....+. ....+ ..+.
T Consensus 201 slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (316)
T cd07842 201 AIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWME 280 (316)
T ss_pred HHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHH
Confidence 99999999999 554322110 0000000 00001 0000
Q ss_pred ---ccCchHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004998 332 ---LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 332 ---~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
...+...+++.+||++||++|||+.|+++||||
T Consensus 281 ~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~~~f 316 (316)
T cd07842 281 KHKKPDSQGFDLLRKLLEYDPTKRITAEEALEHPYF 316 (316)
T ss_pred hccCCCHHHHHHHHHHhcCCcccCcCHHHHhcCCCC
Confidence 122345599999999999999999999999998
No 208
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=99.96 E-value=5.3e-29 Score=265.43 Aligned_cols=203 Identities=15% Similarity=0.154 Sum_probs=149.8
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC------------------CCCCHHHHHH
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK------------------RSVDVYECLH 125 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~------------------~~l~~~~~~~ 125 (720)
.+|..+|.+++||||+++++ ++.+.. .++++||| .+++|.+++.... ..+++..++.
T Consensus 67 ~~E~~~l~~l~h~niv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (304)
T cd05096 67 LKEVKILSRLKDPNIIRLLG-VCVDED---PLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLH 142 (304)
T ss_pred HHHHHHHhhcCCCCeeEEEE-EEecCC---ceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHH
Confidence 36778999999999999999 554443 57999999 8999999984321 2367788999
Q ss_pred HHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcc
Q 004998 126 IFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRL 205 (720)
Q Consensus 126 i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 205 (720)
++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++.....
T Consensus 143 i~~~i~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~------------------------------- 191 (304)
T cd05096 143 VALQIASGMKYLSSLNFVHRDLATRNCLVGENLTIKIADFGMSRNLYAG------------------------------- 191 (304)
T ss_pred HHHHHHHHHHHHHHCCccccCcchhheEEcCCccEEECCCccceecccC-------------------------------
Confidence 9999999999999999999999999999999999999999887432110
Q ss_pred cccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC
Q 004998 206 RREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG 285 (720)
Q Consensus 206 ~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 285 (720)
+. .. ......++..|+|||++.+
T Consensus 192 ---~~----------------------------------~~--------------------~~~~~~~~~~y~aPE~~~~ 214 (304)
T cd05096 192 ---DY----------------------------------YR--------------------IQGRAVLPIRWMAWECILM 214 (304)
T ss_pred ---ce----------------------------------eE--------------------ecCcCCCCccccCHHHHhc
Confidence 00 00 0001245788999999988
Q ss_pred CCCCccccchhhhhhhhhccc-----cCCCCchHHHHHHHh----hcC--CCCccccccC-chHHHHHHHcCCCCCCCCC
Q 004998 286 APVSCASDIYRLGVLLFELFC-----PFSTGEEKTRTMSSL----RHR--VLPPQLLLKF-PKEASFCLWLLHPEPSGRP 353 (720)
Q Consensus 286 ~~~s~~sDIwSLGvll~eLlt-----pf~~~~~~~~~~~~l----~~~--~~p~~~~~~~-p~~~~li~~~L~~dP~~Rp 353 (720)
..++.++|||||||++|||++ ||...... ...... ... .......... +...+|+.+||..||.+||
T Consensus 215 ~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP 293 (304)
T cd05096 215 GKFTTASDVWAFGVTLWEILMLCKEQPYGELTDE-QVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERP 293 (304)
T ss_pred CCCCchhhhHHHHHHHHHHHHccCCCCCCcCCHH-HHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCc
Confidence 889999999999999999985 55543322 111111 111 1111111223 3455999999999999999
Q ss_pred ChHHHHc
Q 004998 354 KMGELLQ 360 (720)
Q Consensus 354 ta~eiL~ 360 (720)
|+.+|.+
T Consensus 294 s~~~i~~ 300 (304)
T cd05096 294 SFSDIHA 300 (304)
T ss_pred CHHHHHH
Confidence 9999954
No 209
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=99.96 E-value=8.6e-30 Score=251.92 Aligned_cols=201 Identities=18% Similarity=0.238 Sum_probs=163.2
Q ss_pred cccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH-cCceeccCCC
Q 004998 71 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-QGIVVHNVRP 149 (720)
Q Consensus 71 Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs-~gIvHrDLKP 149 (720)
+...+.|.||+.||.|..+. .+++.||..+.-+..+|+.-.++++|..+-++...++.||.||-. +||||||+||
T Consensus 145 ~~s~dcpyIV~c~GyFi~n~----dV~IcMelMs~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKP 220 (391)
T KOG0983|consen 145 LKSHDCPYIVQCFGYFITNT----DVFICMELMSTCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKP 220 (391)
T ss_pred hhccCCCeeeeeeeEEeeCc----hHHHHHHHHHHHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCc
Confidence 33455899999999444443 368899998778888887767779999999999999999999996 6999999999
Q ss_pred CcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccCC
Q 004998 150 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 229 (720)
Q Consensus 150 ~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~ 229 (720)
+|||++..|++||||||++-.. .|- +
T Consensus 221 SNILlDe~GniKlCDFGIsGrl------------------------------------vdS---k--------------- 246 (391)
T KOG0983|consen 221 SNILLDERGNIKLCDFGISGRL------------------------------------VDS---K--------------- 246 (391)
T ss_pred cceEEccCCCEEeeccccccee------------------------------------ecc---c---------------
Confidence 9999999999999999987211 110 0
Q ss_pred CccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC---CCCccccchhhhhhhhhccc
Q 004998 230 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA---PVSCASDIYRLGVLLFELFC 306 (720)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~---~~s~~sDIwSLGvll~eLlt 306 (720)
..+...|.+.|||||-+.-. .|+..+||||||+.|+||.|
T Consensus 247 -------------------------------------AhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaT 289 (391)
T KOG0983|consen 247 -------------------------------------AHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELAT 289 (391)
T ss_pred -------------------------------------ccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhc
Confidence 01123689999999998544 39999999999999999999
Q ss_pred ---cCCCCchHHHHHHHhhcCCCCccccc---cCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 307 ---PFSTGEEKTRTMSSLRHRVLPPQLLL---KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 307 ---pf~~~~~~~~~~~~l~~~~~p~~~~~---~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
||........++..+.+. .||.+.. ..|...+|+..||.+|+.+||.-.++|+|||+...
T Consensus 290 g~yPy~~c~tdFe~ltkvln~-ePP~L~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h~Fi~~y 355 (391)
T KOG0983|consen 290 GQYPYKGCKTDFEVLTKVLNE-EPPLLPGHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEHPFIKRY 355 (391)
T ss_pred ccCCCCCCCccHHHHHHHHhc-CCCCCCcccCcCHHHHHHHHHHhhcCcccCcchHHHhcCcceeec
Confidence 888877777777777764 3454433 45777899999999999999999999999999886
No 210
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=99.96 E-value=6e-29 Score=257.50 Aligned_cols=206 Identities=17% Similarity=0.231 Sum_probs=162.0
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
...|..++++++||||+++++ ++.... ..|++||| .+++|.+++.. ....+++..++.++.||+.||.|||++|
T Consensus 46 ~~~e~~~l~~l~~~~i~~~~~-~~~~~~---~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 121 (256)
T cd08218 46 SRKEVAVLSNMKHPNIVQYQE-SFEENG---NLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRK 121 (256)
T ss_pred HHHHHHHHHhCCCCCeeeeEe-eecCCC---eEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 346777999999999999999 444433 68999999 89999999954 3345899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
++|+||+|+||+++.++.++++|||.+........
T Consensus 122 i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~--------------------------------------------- 156 (256)
T cd08218 122 ILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVE--------------------------------------------- 156 (256)
T ss_pred EecCCCCHHHEEEcCCCCEEEeeccceeecCcchh---------------------------------------------
Confidence 99999999999999999999999887732211000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......|++.|+|||++.+..++.++|+|||||++
T Consensus 157 ---------------------------------------------~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~ 191 (256)
T cd08218 157 ---------------------------------------------LARTCIGTPYYLSPEICENRPYNNKSDIWALGCVL 191 (256)
T ss_pred ---------------------------------------------hhhhccCCccccCHHHhCCCCCCCccchhHHHHHH
Confidence 00013578889999999888899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
|+|++ ||....... ....+..+..++......+...++|.+||+.+|.+||++.++++||||
T Consensus 192 ~~l~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~~~~ 256 (256)
T cd08218 192 YEMCTLKHAFEAGNMKN-LVLKIIRGSYPPVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEKNFI 256 (256)
T ss_pred HHHHcCCCCccCCCHHH-HHHHHhcCCCCCCcccCCHHHHHHHHHHhhCChhhCcCHHHHhhCcCC
Confidence 99999 555544433 333333444443333334456699999999999999999999999997
No 211
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=99.96 E-value=3.9e-29 Score=259.40 Aligned_cols=204 Identities=17% Similarity=0.176 Sum_probs=160.4
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++++++||||+++++ .+..+. .+|++||| .|++|.+++... .++++..+..++.||+.||.|||++|
T Consensus 46 ~~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~i~~~l~~lh~~~ 120 (258)
T cd05578 46 NVLNERRILQELNHPFLVNLWY-SFQDEE---NMYLVVDLLLGGDLRYHLSQK-VKFSEEQVKFWICEIVLALEYLHSKG 120 (258)
T ss_pred HHHHHHHHHHhCCCCChHHHHH-hhcCCC---eEEEEEeCCCCCCHHHHHHhc-CCcCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3446777899999999999999 444333 68999999 899999999655 45999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+|+||+|+||+++.++.++|+|||.+.......
T Consensus 121 i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~---------------------------------------------- 154 (258)
T cd05578 121 IIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT---------------------------------------------- 154 (258)
T ss_pred eeccCCCHHHeEEcCCCCEEEeecccccccCCCc----------------------------------------------
Confidence 9999999999999999999999998774321110
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......|+..|+|||.+.+..++.++|+|||||++
T Consensus 155 ---------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l 189 (258)
T cd05578 155 ---------------------------------------------LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTA 189 (258)
T ss_pred ---------------------------------------------cccccCCChhhcCHHHHcccCCCCcccchhhHHHH
Confidence 00013568889999999888899999999999999
Q ss_pred hhccc---cCCCCch--HHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCCh--HHHHcCccc
Q 004998 302 FELFC---PFSTGEE--KTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKM--GELLQSEFL 364 (720)
Q Consensus 302 ~eLlt---pf~~~~~--~~~~~~~l~~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta--~eiL~hp~~ 364 (720)
|+|++ ||..... .......... ..+..+..+| ...+++.+||..||.+||++ .|+++||||
T Consensus 190 ~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~~~~~ 258 (258)
T cd05578 190 YECLRGKRPYRGHSRTIRDQIRAKQET--ADVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLKNHPYF 258 (258)
T ss_pred HHHHhCCCCCCCCCccHHHHHHHHhcc--ccccCcccCcHHHHHHHHHHccCChhHcCCccHHHHhcCCCC
Confidence 99998 5554432 2222322221 2222233344 45599999999999999999 999999997
No 212
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=99.96 E-value=5e-29 Score=260.06 Aligned_cols=196 Identities=12% Similarity=0.129 Sum_probs=145.5
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..|..++..++||||+++++ ++.... ..+++||| .+++|..++......+++..++.++.||+.||+|||++||+
T Consensus 52 ~~~~~~l~~l~hp~iv~~~~-~~~~~~---~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iv 127 (262)
T cd05077 52 FETASMMRQVSHKHIVLLYG-VCVRDV---ENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLV 127 (262)
T ss_pred HHHHHHHHhCCCCCEeeEEE-EEecCC---CCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeE
Confidence 35667889999999999999 444443 45899999 88999998865555699999999999999999999999999
Q ss_pred eccCCCCcEEEccCCc-------eEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCC
Q 004998 144 VHNVRPSCFVMSSFNH-------VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 216 (720)
Q Consensus 144 HrDLKP~NILl~~~~~-------vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~ 216 (720)
||||||+|||++.++. ++++|||.+......
T Consensus 128 H~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~~~~~~~------------------------------------------ 165 (262)
T cd05077 128 HGNVCTKNILLAREGIDGECGPFIKLSDPGIPITVLSR------------------------------------------ 165 (262)
T ss_pred CCCCCcccEEEecCCccCCCCceeEeCCCCCCccccCc------------------------------------------
Confidence 9999999999986654 666666554211000
Q ss_pred CCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCcccc-CCCCCccccch
Q 004998 217 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-GAPVSCASDIY 295 (720)
Q Consensus 217 ~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~-~~~~s~~sDIw 295 (720)
....++..|+|||.+. +..++.++|||
T Consensus 166 ----------------------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~~Diw 193 (262)
T cd05077 166 ----------------------------------------------------QECVERIPWIAPECVEDSKNLSIAADKW 193 (262)
T ss_pred ----------------------------------------------------ccccccccccChhhhcCCCCCCchhHHH
Confidence 0135678899999987 45589999999
Q ss_pred hhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004998 296 RLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 296 SLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~h 361 (720)
||||++|||++ ||...... . ...+.....+ ......+...+|+.+||+.||.+||++.+|+++
T Consensus 194 slG~~l~el~~~~~~p~~~~~~~-~-~~~~~~~~~~-~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~ 260 (262)
T cd05077 194 SFGTTLWEICYNGEIPLKDKTLA-E-KERFYEGQCM-LVTPSCKELADLMTHCMNYDPNQRPFFRAIMRD 260 (262)
T ss_pred HHHHHHHHHHhCCCCCCCCcchh-H-HHHHHhcCcc-CCCCChHHHHHHHHHHcCCChhhCcCHHHHHHh
Confidence 99999999984 44433221 1 1112222111 111223455699999999999999999999864
No 213
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.96 E-value=2.3e-29 Score=271.54 Aligned_cols=218 Identities=18% Similarity=0.160 Sum_probs=155.8
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+..+|..+++.++||||+++++ ++..+. .++++||| .+++|.+++.+. ...+++..++.++.||+.||+|||+.
T Consensus 45 ~~~~e~~~~~~l~h~niv~~~~-~~~~~~---~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~ 120 (328)
T cd08226 45 ALQNEVVLSHFFRHPNIMTSWT-VFTTGS---WLWVISPFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQN 120 (328)
T ss_pred HHHHHHHHHHhCCCCCcceEee-eEecCC---ceEEEEecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 3346777888899999999999 555543 57999999 889999999543 33589999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004998 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+|||++.++.++++||+.+...... ++..+.
T Consensus 121 ~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~-----------------------------------~~~~~~----- 160 (328)
T cd08226 121 GYIHRNIKASHILISGDGLVSLSGLSHLYSLVRN-----------------------------------GQKAKV----- 160 (328)
T ss_pred CeecCCCCHHHEEEeCCCcEEEechHHHhhhhcc-----------------------------------Cccccc-----
Confidence 9999999999999999999999888654211000 000000
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC--CCCccccchhhh
Q 004998 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA--PVSCASDIYRLG 298 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~--~~s~~sDIwSLG 298 (720)
..+ .+ ....++..|+|||++.+. .++.++||||||
T Consensus 161 --------------------------~~~--------------~~---~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG 197 (328)
T cd08226 161 --------------------------VYD--------------FP---QFSTSVLPWLSPELLRQDLYGYNVKSDIYSVG 197 (328)
T ss_pred --------------------------ccc--------------cc---ccccCccCccChhhhcCCCCCCCchhhHHHHH
Confidence 000 00 001346679999999764 378999999999
Q ss_pred hhhhhccc---cCCCCchHHHHHHHhhcCCCCc---------------------------------------------cc
Q 004998 299 VLLFELFC---PFSTGEEKTRTMSSLRHRVLPP---------------------------------------------QL 330 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~~p~---------------------------------------------~~ 330 (720)
|++|||++ ||............+......+ ..
T Consensus 198 ~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (328)
T cd08226 198 ITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSS 277 (328)
T ss_pred HHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhhhhhccchhhhhcccccchhccccccccccccccchhh
Confidence 99999998 5544333322222222111000 00
Q ss_pred cccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 331 LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 331 ~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
....+...+|+.+||..||++|||+.|+|+||||...
T Consensus 278 ~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~~ 314 (328)
T cd08226 278 KTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQV 314 (328)
T ss_pred hhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHHH
Confidence 0112334599999999999999999999999999765
No 214
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=99.96 E-value=9.5e-29 Score=256.36 Aligned_cols=201 Identities=17% Similarity=0.208 Sum_probs=154.5
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|..+|.+++||||+++++ ++.... .++++||| .+++|.+++......+++..++.++.||+.||.|||++||+|
T Consensus 48 ~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H 123 (256)
T cd05114 48 EEAKVMMKLSHPKLVQLYG-VCTQQK---PLYIVTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIH 123 (256)
T ss_pred HHHHHHHHCCCCCceeEEE-EEccCC---CEEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 5777999999999999999 554443 57999999 899999999654445899999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+||+++.++.++++|||.+.........
T Consensus 124 ~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~----------------------------------------------- 156 (256)
T cd05114 124 RDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYT----------------------------------------------- 156 (256)
T ss_pred cccCcceEEEcCCCeEEECCCCCccccCCCcee-----------------------------------------------
Confidence 999999999999999999988877432111000
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhc
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 304 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eL 304 (720)
......++..|+|||.+.+..++.++|||||||++|||
T Consensus 157 ------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el 194 (256)
T cd05114 157 ------------------------------------------SSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEV 194 (256)
T ss_pred ------------------------------------------ccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHH
Confidence 00001345679999999888899999999999999999
Q ss_pred cc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 305 FC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 305 lt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
++ ||...... .....+..+..+.......+...+|+.+||..+|.+||++.++++
T Consensus 195 ~~~g~~p~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~ 253 (256)
T cd05114 195 FTEGKMPFEKKSNY-EVVEMISRGFRLYRPKLASMTVYEVMYSCWHEKPEGRPTFAELLR 253 (256)
T ss_pred HcCCCCCCCCCCHH-HHHHHHHCCCCCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 98 55544333 333444433222221222334569999999999999999999986
No 215
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=99.96 E-value=9.1e-29 Score=258.71 Aligned_cols=206 Identities=20% Similarity=0.264 Sum_probs=157.5
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|..++.+++||||+++++ ++.... .+++|||| .|++|.+++.+.+ .+++..++.++.||+.||.|||++|++|
T Consensus 57 ~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lH~~~i~H 131 (272)
T cd06629 57 SEIETLKDLDHLNIVQYLG-FETTEE---YLSIFLEYVPGGSIGSCLRTYG-RFEEQLVRFFTEQVLEGLAYLHSKGILH 131 (272)
T ss_pred HHHHHHHhcCCCCcceEEE-EeccCC---ceEEEEecCCCCcHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHhhCCeee
Confidence 5777899999999999999 554443 57999999 8999999996553 5899999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||+|+||+++.++.++++|||.+....... ..
T Consensus 132 ~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~---------------------------------~~-------------- 164 (272)
T cd06629 132 RDLKADNLLVDADGICKISDFGISKKSDDIY---------------------------------DN-------------- 164 (272)
T ss_pred cCCChhhEEEcCCCeEEEeeccccccccccc---------------------------------cc--------------
Confidence 9999999999999999999998873321000 00
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC--CCccccchhhhhhhh
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP--VSCASDIYRLGVLLF 302 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~--~s~~sDIwSLGvll~ 302 (720)
.......|+..|+|||.+.... ++.++|+||||+++|
T Consensus 165 -----------------------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~ 203 (272)
T cd06629 165 -----------------------------------------DQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVL 203 (272)
T ss_pred -----------------------------------------cccccccCCccccCHHHhccccCCCCccchhHHHHHHHH
Confidence 0001135788999999987654 789999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhc---CCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004998 303 ELFC---PFSTGEEKTRTMSSLRH---RVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~---~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
+|++ ||............... ..+++......+ ...+|+.+||+++|..||++.++|+||||
T Consensus 204 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~ 272 (272)
T cd06629 204 EMFAGRRPWSDEEAIAAMFKLGNKRSAPPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQHPFI 272 (272)
T ss_pred HHHhCCCCCcCcchHHHHHHhhccccCCcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhCCCC
Confidence 9999 55443333222221111 122222222333 44599999999999999999999999997
No 216
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=99.96 E-value=4.6e-29 Score=258.72 Aligned_cols=198 Identities=15% Similarity=0.151 Sum_probs=152.4
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~-~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..|..++++++||||+++++.++..+. ..|++||| .+++|.+++.+.. ..+++..++.++.||+.||.|||++||
T Consensus 47 ~~e~~~l~~l~~~~i~~~~~~~~~~~~---~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i 123 (256)
T cd05082 47 LAEASVMTQLRHSNLVQLLGVIVEEKG---GLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNF 123 (256)
T ss_pred HHHHHHHHhCCCCCeeeEEEEEEcCCC---ceEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence 367779999999999999994444332 57999999 8899999995433 348999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.+|++|||.+...... .
T Consensus 124 ~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~---------------------------------~-------------- 156 (256)
T cd05082 124 VHRDLAARNVLVSEDNVAKVSDFGLTKEASST---------------------------------Q-------------- 156 (256)
T ss_pred eccccchheEEEcCCCcEEecCCccceecccc---------------------------------C--------------
Confidence 99999999999999999999998877321000 0
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
....++..|+|||++.+..++.++|||||||++|
T Consensus 157 ----------------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~ 190 (256)
T cd05082 157 ----------------------------------------------DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLW 190 (256)
T ss_pred ----------------------------------------------CCCccceeecCHHHHccCCCCchhhhHHHHHHHH
Confidence 0012356799999998888999999999999999
Q ss_pred hccc----cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 303 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 303 eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
||++ ||..... ......+.... ++......| ...+|+.+||+.+|++|||+.++++
T Consensus 191 ~l~~~g~~p~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 251 (256)
T cd05082 191 EIYSFGRVPYPRIPL-KDVVPRVEKGY-KMDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLRE 251 (256)
T ss_pred HHHhCCCCCCCCCCH-HHHHHHHhcCC-CCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 9996 5544322 23333343332 222333334 4459999999999999999999975
No 217
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.96 E-value=1.8e-29 Score=267.60 Aligned_cols=215 Identities=17% Similarity=0.189 Sum_probs=169.9
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHH-hCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWL-DKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L-~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|..||.++.||.||.+-. .|+..+ .+++|||-..|+..+.| ....+.+++...+.++.||+.||.|||-+||||
T Consensus 612 ~EVaILq~l~HPGiV~le~-M~ET~e---rvFVVMEKl~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvH 687 (888)
T KOG4236|consen 612 NEVAILQNLHHPGIVNLEC-MFETPE---RVFVVMEKLHGDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVH 687 (888)
T ss_pred HHHHHHHhcCCCCeeEEEE-eecCCc---eEEEEehhhcchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceee
Confidence 5667999999999999988 565554 57999999666766666 444455999999999999999999999999999
Q ss_pred ccCCCCcEEEcc---CCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 145 HNVRPSCFVMSS---FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 145 rDLKP~NILl~~---~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
+||||+|||+.+ .-++||||||+++..|... |
T Consensus 688 CDLKPENVLLas~~~FPQvKlCDFGfARiIgEks----------------------------------F----------- 722 (888)
T KOG4236|consen 688 CDLKPENVLLASASPFPQVKLCDFGFARIIGEKS----------------------------------F----------- 722 (888)
T ss_pred ccCCchheeeccCCCCCceeeccccceeecchhh----------------------------------h-----------
Confidence 999999999973 3578888888887655431 1
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
....+|||.|+|||++....|..+-|+||+|||+
T Consensus 723 ----------------------------------------------RrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIi 756 (888)
T KOG4236|consen 723 ----------------------------------------------RRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVII 756 (888)
T ss_pred ----------------------------------------------hhhhcCCccccCHHHHhhccccccccceeeeEEE
Confidence 1126899999999999999999999999999999
Q ss_pred hhccccCCCCchHHHHHHHhhcC--CCCccccccCchHH-HHHHHcCCCCCCCCCChHHHHcCcccCCCccchHHHH
Q 004998 302 FELFCPFSTGEEKTRTMSSLRHR--VLPPQLLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEERE 375 (720)
Q Consensus 302 ~eLltpf~~~~~~~~~~~~l~~~--~~p~~~~~~~p~~~-~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~~l~e~~ 375 (720)
|--|++-.++++...+...|.+. .+|+..+.+.+.++ |||..+|+..-.+|.+++..|.|||++..+.-+.-++
T Consensus 757 YVsLSGTFPFNEdEdIndQIQNAaFMyPp~PW~eis~~AidlIn~LLqVkm~kRysvdk~lsh~Wlq~yq~w~DLRe 833 (888)
T KOG4236|consen 757 YVSLSGTFPFNEDEDINDQIQNAAFMYPPNPWSEISPEAIDLINNLLQVKMRKRYSVDKSLSHPWLQDYQTWLDLRE 833 (888)
T ss_pred EEEecccccCCCccchhHHhhccccccCCCchhhcCHHHHHHHHHHHHHHHHHhcchHhhccchhhhcchHHHHHHH
Confidence 99998333333333334444432 35666666665555 9999999999999999999999999999855444433
No 218
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=99.96 E-value=5.6e-29 Score=263.17 Aligned_cols=203 Identities=19% Similarity=0.190 Sum_probs=155.5
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC------------CCCCHHHHHHHHHHHH
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK------------RSVDVYECLHIFRQIV 131 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~------------~~l~~~~~~~i~~QIl 131 (720)
.+|..++.+++||||+++++ ++.... .++++||| .+++|.++|.... ..+++..++.++.||+
T Consensus 55 ~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~ 130 (288)
T cd05093 55 HREAELLTNLQHEHIVKFYG-VCVEGD---PLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIA 130 (288)
T ss_pred HHHHHHHHhCCCCCcceEEE-EEecCC---ccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHH
Confidence 46778999999999999999 554433 57999999 8999999995322 2489999999999999
Q ss_pred HHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccc
Q 004998 132 EIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQ 211 (720)
Q Consensus 132 ~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfg 211 (720)
.||+|||++||+||||||+||+++.++.++|+|||.+....... .
T Consensus 131 ~aL~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~----------------------------------~- 175 (288)
T cd05093 131 AGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTD----------------------------------Y- 175 (288)
T ss_pred HHHHHHHhCCeeecccCcceEEEccCCcEEeccCCccccccCCc----------------------------------e-
Confidence 99999999999999999999999999999999998874321110 0
Q ss_pred cccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCcc
Q 004998 212 LVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCA 291 (720)
Q Consensus 212 la~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~ 291 (720)
........+++.|+|||.+.+..++.+
T Consensus 176 -----------------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~ 202 (288)
T cd05093 176 -----------------------------------------------------YRVGGHTMLPIRWMPPESIMYRKFTTE 202 (288)
T ss_pred -----------------------------------------------------eecCCCCCccccccCHHHhccCCCCch
Confidence 000001245778999999988889999
Q ss_pred ccchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 292 SDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 292 sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
+|||||||++|+|++ ||...... .....+..+..++......+...+|+.+||++||.+|||+.+++.
T Consensus 203 sDiwslG~il~~l~t~g~~p~~~~~~~-~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~ 274 (288)
T cd05093 203 SDVWSLGVVLWEIFTYGKQPWYQLSNN-EVIECITQGRVLQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHS 274 (288)
T ss_pred hhHHHHHHHHHHHHhCCCCCCCCCCHH-HHHHHHHcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 999999999999997 44443332 333444444333322233345669999999999999999999964
No 219
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=99.96 E-value=3.7e-29 Score=266.84 Aligned_cols=201 Identities=15% Similarity=0.157 Sum_probs=151.8
Q ss_pred eehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC---------------CCCCHHHHHHHH
Q 004998 65 HSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---------------RSVDVYECLHIF 127 (720)
Q Consensus 65 ~~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~---------------~~l~~~~~~~i~ 127 (720)
.+|..++.++ +||||+++++ ++..+. .+|++||| .+++|.+++.+.. ..+++..++.++
T Consensus 55 ~~Ei~~l~~l~~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 130 (303)
T cd05088 55 AGELEVLCKLGHHPNIINLLG-ACEHRG---YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 130 (303)
T ss_pred HHHHHHHHHhcCCCCcceEEE-EECCCC---CceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHH
Confidence 3577788888 8999999999 554443 57999999 8999999995322 247899999999
Q ss_pred HHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccc
Q 004998 128 RQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRR 207 (720)
Q Consensus 128 ~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l 207 (720)
.||+.||+|||++||+||||||+|||++.++.++|+|||++......
T Consensus 131 ~qi~~al~~LH~~gi~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~--------------------------------- 177 (303)
T cd05088 131 ADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVY--------------------------------- 177 (303)
T ss_pred HHHHHHHHHHHhCCccccccchheEEecCCCcEEeCccccCcccchh---------------------------------
Confidence 99999999999999999999999999999999999988876311000
Q ss_pred cccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC
Q 004998 208 EDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP 287 (720)
Q Consensus 208 ~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~ 287 (720)
. ......++..|+|||.+.+..
T Consensus 178 ----~------------------------------------------------------~~~~~~~~~~y~aPE~~~~~~ 199 (303)
T cd05088 178 ----V------------------------------------------------------KKTMGRLPVRWMAIESLNYSV 199 (303)
T ss_pred ----h------------------------------------------------------hcccCCCcccccCHHHHhccC
Confidence 0 000012356799999998888
Q ss_pred CCccccchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004998 288 VSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 288 ~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~h 361 (720)
++.++|||||||++|||++ ||...... .....+.....++......+...+|+.+||+.+|++||++.+++++
T Consensus 200 ~~~~~Di~slG~il~ellt~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 276 (303)
T cd05088 200 YTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA-ELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS 276 (303)
T ss_pred CcccccchhhhhHHHHHHhcCCCCcccCChH-HHHHHHhcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 9999999999999999996 55443332 2333333222222222233455699999999999999999999874
No 220
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=99.96 E-value=5.5e-29 Score=269.80 Aligned_cols=204 Identities=18% Similarity=0.220 Sum_probs=154.4
Q ss_pred ehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC----------------------------
Q 004998 66 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---------------------------- 115 (720)
Q Consensus 66 ~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~---------------------------- 115 (720)
.|..++.++ +||||+++++.+...+ ..++++||| .+++|.++|....
T Consensus 59 ~E~~~~~~l~~h~niv~~~~~~~~~~---~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (337)
T cd05054 59 TELKILIHIGHHLNVVNLLGACTKPG---GPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDS 135 (337)
T ss_pred HHHHHHHhhccCcchhheeeeEecCC---CCEEEEEecCCCCCHHHHHHhcccccccccccccccccccccccccccccc
Confidence 567788888 8999999999443332 267899999 9999999984311
Q ss_pred --------------------------------CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEe
Q 004998 116 --------------------------------RSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFI 163 (720)
Q Consensus 116 --------------------------------~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkli 163 (720)
..+++..+..++.||+.||.|||++||+||||||+|||++.++.++|+
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~ 215 (337)
T cd05054 136 VSSSQSSASSGFIEDKSLSDVEEDEEGDELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKIC 215 (337)
T ss_pred CCccccccccccccCcchhhcccchhhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEe
Confidence 257899999999999999999999999999999999999999999999
Q ss_pred ccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccCCCccccccccccccc
Q 004998 164 ESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQ 243 (720)
Q Consensus 164 Dfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~ 243 (720)
|||++........ .
T Consensus 216 DfG~a~~~~~~~~--------------------------------~---------------------------------- 229 (337)
T cd05054 216 DFGLARDIYKDPD--------------------------------Y---------------------------------- 229 (337)
T ss_pred ccccchhcccCcc--------------------------------h----------------------------------
Confidence 9998743211000 0
Q ss_pred cccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhccc----cCCCCchHHHHHH
Q 004998 244 EHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMS 319 (720)
Q Consensus 244 ~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~ 319 (720)
.......++..|+|||++.+..++.++|||||||++|||++ ||...........
T Consensus 230 ----------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~ 287 (337)
T cd05054 230 ----------------------VRKGDARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCR 287 (337)
T ss_pred ----------------------hhccCCCCCccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHH
Confidence 00001245678999999999999999999999999999986 5654333323333
Q ss_pred HhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 320 SLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 320 ~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
.+..+..+.......+...+++.+||+.+|++||++.|+++
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~ 328 (337)
T cd05054 288 RLKEGTRMRAPEYATPEIYSIMLDCWHNNPEDRPTFSELVE 328 (337)
T ss_pred HHhccCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 44443333222233455669999999999999999999987
No 221
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=99.96 E-value=6.1e-29 Score=257.50 Aligned_cols=203 Identities=18% Similarity=0.214 Sum_probs=158.4
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
...|..+++.++||||+++++ .+.+.. .+|++||| .+++|.+++.. ....+++..++.++.||+.||.|||++|
T Consensus 45 ~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~ 120 (255)
T cd08219 45 SRKEAVLLAKMKHPNIVAFKE-SFEADG---HLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKR 120 (255)
T ss_pred HHHHHHHHHhCCCCCcceEEE-EEEECC---EEEEEEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence 346777899999999999999 555443 68999999 89999999843 4455899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+|+||||+||+++.++.++++|||.+....... .+
T Consensus 121 i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~---------------------------------~~----------- 156 (255)
T cd08219 121 VLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPG---------------------------------AY----------- 156 (255)
T ss_pred cccCCCCcceEEECCCCcEEEcccCcceeecccc---------------------------------cc-----------
Confidence 9999999999999999999999998873321110 00
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
.....|++.|+|||++.+..++.++||||||+++
T Consensus 157 ----------------------------------------------~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~ 190 (255)
T cd08219 157 ----------------------------------------------ACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCIL 190 (255)
T ss_pred ----------------------------------------------cccccCCccccCHHHHccCCcCchhhhhhhchhh
Confidence 0013578899999999888899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~h 361 (720)
|+|++ ||...... .....+..+..++..........+|+.+||+.||.+||++.+++.-
T Consensus 191 ~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 191 YELCTLKHPFQANSWK-NLILKVCQGSYKPLPSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred eehhhccCCCCCCCHH-HHHHHHhcCCCCCCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 99998 66554332 3333444444433322233445699999999999999999999863
No 222
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=99.96 E-value=7.3e-29 Score=257.54 Aligned_cols=201 Identities=14% Similarity=0.130 Sum_probs=155.3
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|..+++.++||||+++++ ++..+ .++++||| .+++|.+++.... .+++..+..++.||+.||.|||++||+|
T Consensus 45 ~e~~~l~~l~h~~i~~~~~-~~~~~----~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~al~~lH~~~i~H 118 (257)
T cd05116 45 REANVMQQLDNPYIVRMIG-ICEAE----SWMLVMELAELGPLNKFLQKNK-HVTEKNITELVHQVSMGMKYLEETNFVH 118 (257)
T ss_pred HHHHHHHhCCCCCcceEEE-EEcCC----CcEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCEee
Confidence 6777999999999999999 55432 46899999 8899999995443 4899999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||.||+++.++.++|+|||.+...+.... +
T Consensus 119 ~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~---------------------------------~-------------- 151 (257)
T cd05116 119 RDLAARNVLLVTQHYAKISDFGLSKALGADEN---------------------------------Y-------------- 151 (257)
T ss_pred cccchhhEEEcCCCeEEECCCccccccCCCCC---------------------------------e--------------
Confidence 99999999999999999999888743321100 0
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhc
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 304 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eL 304 (720)
. .......++..|+|||.+....++.++|||||||++|||
T Consensus 152 ~----------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el 191 (257)
T cd05116 152 Y----------------------------------------KAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEA 191 (257)
T ss_pred e----------------------------------------eecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHH
Confidence 0 000002346789999999888899999999999999999
Q ss_pred cc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 305 FC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 305 lt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
++ ||...... .....+..+..++......++..+||.+||.+||++||++.+|.+
T Consensus 192 ~t~g~~p~~~~~~~-~~~~~i~~~~~~~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~ 250 (257)
T cd05116 192 FSYGQKPYKGMKGN-EVTQMIESGERMECPQRCPPEMYDLMKLCWTYGVDERPGFAVVEL 250 (257)
T ss_pred HhCCCCCCCCCCHH-HHHHHHHCCCCCCCCCCCCHHHHHHHHHHhccCchhCcCHHHHHH
Confidence 96 55544332 444455554443333334455669999999999999999999864
No 223
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=99.96 E-value=8e-29 Score=262.33 Aligned_cols=208 Identities=18% Similarity=0.208 Sum_probs=155.3
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.+|..++.+++||||+++++. +.... ....|++|||.+++|.+++......+++.+++.++.||+.||.|||++||+|
T Consensus 52 ~~e~~~l~~l~h~ni~~~~~~-~~~~~-~~~~~lv~e~~~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H 129 (293)
T cd07843 52 LREINILLKLQHPNIVTVKEV-VVGSN-LDKIYMVMEYVEHDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILH 129 (293)
T ss_pred HHHHHHHHhcCCCCEEEEEEE-EEecC-CCcEEEEehhcCcCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeee
Confidence 357788999999999999994 43331 2368999999667999999655556999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
+||||+||+++.++.++|+|||.+...+.... .
T Consensus 130 ~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~--------------------------------~--------------- 162 (293)
T cd07843 130 RDLKTSNLLLNNRGILKICDFGLAREYGSPLK--------------------------------P--------------- 162 (293)
T ss_pred ccCCHHHEEECCCCcEEEeecCceeeccCCcc--------------------------------c---------------
Confidence 99999999999999999999988743321100 0
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC-CCccccchhhhhhhhh
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFE 303 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGvll~e 303 (720)
.....+++.|+|||.+.+.. ++.++|||||||++||
T Consensus 163 -------------------------------------------~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~ 199 (293)
T cd07843 163 -------------------------------------------YTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAE 199 (293)
T ss_pred -------------------------------------------cccccccccccCchhhcCCccccchhhHHHHHHHHHH
Confidence 00124688999999987654 6899999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhc--------------------C--------CCCcccccc--CchHHHHHHHcCCCCCC
Q 004998 304 LFC---PFSTGEEKTRTMSSLRH--------------------R--------VLPPQLLLK--FPKEASFCLWLLHPEPS 350 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~--------------------~--------~~p~~~~~~--~p~~~~li~~~L~~dP~ 350 (720)
|++ ||............... . .+...+... .+...+|+.+||+.+|+
T Consensus 200 l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~ 279 (293)
T cd07843 200 LLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPA 279 (293)
T ss_pred HHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCcc
Confidence 999 44433222111111000 0 000111111 23345999999999999
Q ss_pred CCCChHHHHcCccc
Q 004998 351 GRPKMGELLQSEFL 364 (720)
Q Consensus 351 ~Rpta~eiL~hp~~ 364 (720)
+|||+.|+|+||||
T Consensus 280 ~R~t~~ell~~~~f 293 (293)
T cd07843 280 KRISAEDALKHPYF 293 (293)
T ss_pred ccCCHHHHhcCCCC
Confidence 99999999999998
No 224
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.96 E-value=3.7e-29 Score=271.74 Aligned_cols=209 Identities=17% Similarity=0.211 Sum_probs=158.7
Q ss_pred ehhhhcccCCCCCceecccceeecC--CCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENE--AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~--~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
+|..+++.++||||+++++.+.... .....+|+|+||.|++|.+++... .+++..++.++.||+.||.|||+.||+
T Consensus 63 ~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~--~l~~~~~~~~~~ql~~aL~~LH~~gi~ 140 (343)
T cd07851 63 RELRLLKHMDHENVIGLLDVFTPASSLEDFQDVYLVTHLMGADLNNIVKCQ--KLSDDHIQFLVYQILRGLKYIHSAGII 140 (343)
T ss_pred HHHHHHHhccCCCHHHHHHHhhccccccccccEEEEEecCCCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 5778999999999999998443222 223358999999888999998542 499999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+||+++.++.++|+|||.+......
T Consensus 141 H~dlkp~Nill~~~~~~kL~dfg~~~~~~~~------------------------------------------------- 171 (343)
T cd07851 141 HRDLKPSNIAVNEDCELKILDFGLARHTDDE------------------------------------------------- 171 (343)
T ss_pred cCCCCHHHeEECCCCCEEEcccccccccccc-------------------------------------------------
Confidence 9999999999999999999999887332100
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-CCCccccchhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLF 302 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGvll~ 302 (720)
.....++..|+|||.+.+. .++.++|||||||++|
T Consensus 172 --------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~ 207 (343)
T cd07851 172 --------------------------------------------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 207 (343)
T ss_pred --------------------------------------------ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHH
Confidence 0013568899999998654 5789999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhc--CCCCc----------------------------cccccCchHHHHHHHcCCCCC
Q 004998 303 ELFC---PFSTGEEKTRTMSSLRH--RVLPP----------------------------QLLLKFPKEASFCLWLLHPEP 349 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~--~~~p~----------------------------~~~~~~p~~~~li~~~L~~dP 349 (720)
||++ ||........ ...+.. +..++ ......+...+|+.+||..+|
T Consensus 208 elltg~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P 286 (343)
T cd07851 208 ELLTGKTLFPGSDHIDQ-LKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDP 286 (343)
T ss_pred HHHhCCCCCCCCChHHH-HHHHHHhcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCCh
Confidence 9999 5654433221 111111 00110 011123445599999999999
Q ss_pred CCCCChHHHHcCcccCCCccc
Q 004998 350 SGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 350 ~~Rpta~eiL~hp~~~~~~~~ 370 (720)
.+|||+.+|++||||......
T Consensus 287 ~~Rpt~~ell~h~~~~~~~~~ 307 (343)
T cd07851 287 DKRITAAEALAHPYLAEYHDP 307 (343)
T ss_pred hhCCCHHHHhcCCCccccCCC
Confidence 999999999999999987444
No 225
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.96 E-value=7.4e-30 Score=258.08 Aligned_cols=213 Identities=18% Similarity=0.213 Sum_probs=160.8
Q ss_pred ccceeeeehhhhcccCCCCCceecccceeec--CCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHH
Q 004998 59 DFELRKHSDGVELTHGDHLRNQGGLSGVCEN--EAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYA 136 (720)
Q Consensus 59 ~~~~r~~~e~~~Ls~l~HpnIV~l~~~~~~~--~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~y 136 (720)
....|..||..++..++|+||++++.++... ......+|+|||+...+|.+.+. -.++-..+..|++|++.|+.|
T Consensus 57 ~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~y~v~e~m~~nl~~vi~---~elDH~tis~i~yq~~~~ik~ 133 (369)
T KOG0665|consen 57 THAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEVYLVMELMDANLCQVIL---MELDHETISYILYQMLCGIKH 133 (369)
T ss_pred ccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhHHHHHHhhhhHHHHHHH---HhcchHHHHHHHHHHHHHHHH
Confidence 4555888999999999999999999943321 12233479999999999999884 227788999999999999999
Q ss_pred HHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCC
Q 004998 137 AHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 216 (720)
Q Consensus 137 LHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~ 216 (720)
||+.||+||||||+||++..++.+|+.|||.++.-+. ||
T Consensus 134 lhs~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~-----------------------------------~~------ 172 (369)
T KOG0665|consen 134 LHSAGIIHRDLKPSNIVVNSDCTLKILDFGLARTEDT-----------------------------------DF------ 172 (369)
T ss_pred HHhcceeecccCcccceecchhheeeccchhhcccCc-----------------------------------cc------
Confidence 9999999999999999999999999998888743211 11
Q ss_pred CCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchh
Q 004998 217 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYR 296 (720)
Q Consensus 217 ~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwS 296 (720)
.-+.++.|..|.|||++.+..|...+||||
T Consensus 173 --------------------------------------------------~mtpyVvtRyyrapevil~~~~ke~vdiwS 202 (369)
T KOG0665|consen 173 --------------------------------------------------MMTPYVVTRYYRAPEVILGMGYKENVDIWS 202 (369)
T ss_pred --------------------------------------------------ccCchhheeeccCchheeccCCcccchhhh
Confidence 112368899999999999999999999999
Q ss_pred hhhhhhhcccc---CCCCchHHHH--------------HHHhh------------------cCCCCcc-----ccc---c
Q 004998 297 LGVLLFELFCP---FSTGEEKTRT--------------MSSLR------------------HRVLPPQ-----LLL---K 333 (720)
Q Consensus 297 LGvll~eLltp---f~~~~~~~~~--------------~~~l~------------------~~~~p~~-----~~~---~ 333 (720)
+||++.||+++ |++....... +..+. ...+|.. ... .
T Consensus 203 vGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~ 282 (369)
T KOG0665|consen 203 VGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLD 282 (369)
T ss_pred hhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccc
Confidence 99999999982 3332211111 11110 0011111 111 1
Q ss_pred CchHHHHHHHcCCCCCCCCCChHHHHcCcccC
Q 004998 334 FPKEASFCLWLLHPEPSGRPKMGELLQSEFLN 365 (720)
Q Consensus 334 ~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~ 365 (720)
.....+++.+||..||++|.+++++|+||||+
T Consensus 283 ~~~ardll~~MLvi~pe~Risv~daL~HPY~~ 314 (369)
T KOG0665|consen 283 CSLARDLLSKMLVIDPEKRISVDDALRHPYIK 314 (369)
T ss_pred hHHHHHHHHHhhccChhhcccHHHHhcCCeee
Confidence 11223899999999999999999999999998
No 226
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=99.96 E-value=5.9e-29 Score=269.21 Aligned_cols=219 Identities=17% Similarity=0.201 Sum_probs=159.6
Q ss_pred eeeehhhhcccCCCCCceecccceeecC-CCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENE-AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~-~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+...|..++.+++||||+++++.+.... .....+|++|||.+++|.+++... .+++..++.++.||+.||.|||+.|
T Consensus 49 ~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~--~l~~~~~~~i~~ql~~aL~~LH~~~ 126 (336)
T cd07849 49 RTLREIKILRRFKHENIIGILDIIRPPSFESFNDVYIVQELMETDLYKLIKTQ--HLSNDHIQYFLYQILRGLKYIHSAN 126 (336)
T ss_pred HHHHHHHHHHhCCCCCcCchhheeecccccccceEEEEehhcccCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3446888999999999999999433222 123457999999777999888443 4999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++.++|+|||++......... .
T Consensus 127 ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~--------------------------------~----------- 163 (336)
T cd07849 127 VLHRDLKPSNLLLNTNCDLKICDFGLARIADPEHDH--------------------------------T----------- 163 (336)
T ss_pred eeccCCCHHHEEECCCCCEEECcccceeeccccccc--------------------------------c-----------
Confidence 999999999999999999999999887432111000 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-CCCCccccchhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVL 300 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sDIwSLGvl 300 (720)
. ......||+.|+|||.+.+ ..++.++|||||||+
T Consensus 164 -----------------------------------------~---~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvi 199 (336)
T cd07849 164 -----------------------------------------G---FLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCI 199 (336)
T ss_pred -----------------------------------------C---CcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHH
Confidence 0 0011467999999998765 458999999999999
Q ss_pred hhhccc---cCCCCchHHHH--HHHhhcCC-------------------CC--c------cccccCchHHHHHHHcCCCC
Q 004998 301 LFELFC---PFSTGEEKTRT--MSSLRHRV-------------------LP--P------QLLLKFPKEASFCLWLLHPE 348 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~--~~~l~~~~-------------------~p--~------~~~~~~p~~~~li~~~L~~d 348 (720)
+|+|++ ||......... +..+.... .+ + ......+...+|+.+||+.+
T Consensus 200 l~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~d 279 (336)
T cd07849 200 LAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFN 279 (336)
T ss_pred HHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCC
Confidence 999999 55433221110 00000000 00 0 01122345569999999999
Q ss_pred CCCCCChHHHHcCcccCCCccc
Q 004998 349 PSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 349 P~~Rpta~eiL~hp~~~~~~~~ 370 (720)
|++|||+.|+++||||....+.
T Consensus 280 P~~Rpt~~e~l~hp~~~~~~~~ 301 (336)
T cd07849 280 PHKRITVEEALAHPYLEQYHDP 301 (336)
T ss_pred hhhCcCHHHHhcCccccccCCC
Confidence 9999999999999999988654
No 227
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=99.96 E-value=1.2e-28 Score=259.47 Aligned_cols=203 Identities=15% Similarity=0.098 Sum_probs=154.3
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
...|...+++++||||+++++ ++... ..++++|| .+++|.+++......+++..++.++.||+.||.|||++|+
T Consensus 56 ~~~~~~~l~~l~h~~iv~~~~-~~~~~----~~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i 130 (279)
T cd05111 56 ITDHMLAMGSLDHAYIVRLLG-ICPGA----SLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRM 130 (279)
T ss_pred HHHHHHHHhcCCCCCcceEEE-EECCC----ccEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence 346667889999999999999 44322 35788999 8999999996655669999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.+||+|||.++........ .
T Consensus 131 iH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~~~~--------------------------------~------------ 166 (279)
T cd05111 131 VHRNLAARNILLKSDSIVQIADFGVADLLYPDDKK--------------------------------Y------------ 166 (279)
T ss_pred eccccCcceEEEcCCCcEEEcCCccceeccCCCcc--------------------------------c------------
Confidence 99999999999999999999999887432111000 0
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......++..|+|||.+.+..++.++|||||||++|
T Consensus 167 --------------------------------------------~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~ 202 (279)
T cd05111 167 --------------------------------------------FYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVW 202 (279)
T ss_pred --------------------------------------------ccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHH
Confidence 000124577899999998888999999999999999
Q ss_pred hccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 303 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 303 eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
||++ ||...... .....+..+..++..........+++.+||..||+.|||+.|+++
T Consensus 203 el~t~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~ 263 (279)
T cd05111 203 EMMSYGAEPYAGMRPH-EVPDLLEKGERLAQPQICTIDVYMVMVKCWMIDENVRPTFKELAN 263 (279)
T ss_pred HHHcCCCCCCCCCCHH-HHHHHHHCCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 9997 55443322 223333333333322222234569999999999999999999975
No 228
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.96 E-value=3.6e-29 Score=271.09 Aligned_cols=218 Identities=18% Similarity=0.223 Sum_probs=159.4
Q ss_pred eeeehhhhcccCCCCCceecccceeecC-CCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENE-AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~-~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|..++||||+++++.+.... .....+|++|||.+++|.+++...+ .+++..++.++.||+.||.|||++|
T Consensus 50 ~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~-~l~~~~~~~i~~qi~~aL~~LH~~~ 128 (337)
T cd07858 50 RTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDVYIVYELMDTDLHQIIRSSQ-TLSDDHCQYFLYQLLRGLKYIHSAN 128 (337)
T ss_pred HHHHHHHHHHhcCCCCccchHHheecccccccCcEEEEEeCCCCCHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3446888999999999999999433221 1223589999997789999996544 5999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
++||||||+||+++.++.++|+|||++...... ..+
T Consensus 129 i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~---------------------------------~~~----------- 164 (337)
T cd07858 129 VLHRDLKPSNLLLNANCDLKICDFGLARTTSEK---------------------------------GDF----------- 164 (337)
T ss_pred EecCCCCHHHEEEcCCCCEEECcCccccccCCC---------------------------------ccc-----------
Confidence 999999999999999999999998877332110 000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-CCCCccccchhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVL 300 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sDIwSLGvl 300 (720)
.....++..|+|||.+.+ ..++.++|||||||+
T Consensus 165 ----------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~i 198 (337)
T cd07858 165 ----------------------------------------------MTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCI 198 (337)
T ss_pred ----------------------------------------------ccccccccCccChHHHhcCCCCCCcccHHHHHHH
Confidence 001356889999999865 358999999999999
Q ss_pred hhhccc---cCCCCchHH--HHHHHhhc------------------------CCCC---ccccccCchHHHHHHHcCCCC
Q 004998 301 LFELFC---PFSTGEEKT--RTMSSLRH------------------------RVLP---PQLLLKFPKEASFCLWLLHPE 348 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~--~~~~~l~~------------------------~~~p---~~~~~~~p~~~~li~~~L~~d 348 (720)
+|+|++ ||...+... ........ ...+ .......+...+|+.+||+++
T Consensus 199 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~ 278 (337)
T cd07858 199 FAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFD 278 (337)
T ss_pred HHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCC
Confidence 999998 454322110 00000000 0000 001122344459999999999
Q ss_pred CCCCCChHHHHcCcccCCCccch
Q 004998 349 PSGRPKMGELLQSEFLNEPRDSM 371 (720)
Q Consensus 349 P~~Rpta~eiL~hp~~~~~~~~l 371 (720)
|++|||+.++|+||||.......
T Consensus 279 P~~Rps~~ell~h~~~~~~~~~~ 301 (337)
T cd07858 279 PSKRITVEEALAHPYLASLHDPS 301 (337)
T ss_pred hhhccCHHHHHcCcchhhhcCcc
Confidence 99999999999999998865543
No 229
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=99.96 E-value=9.7e-29 Score=261.71 Aligned_cols=202 Identities=18% Similarity=0.200 Sum_probs=155.4
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC---------------CCCCHHHHHHHHHH
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---------------RSVDVYECLHIFRQ 129 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~---------------~~l~~~~~~~i~~Q 129 (720)
+|..++++++||||+++++ ++.... ..++|||| .+++|.+++.... ..+++..++.++.|
T Consensus 56 ~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 131 (291)
T cd05094 56 REAELLTNLQHEHIVKFYG-VCGDGD---PLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQ 131 (291)
T ss_pred HHHHHHhcCCCCCcceEEE-EEccCC---ceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHH
Confidence 6777899999999999999 554443 57999999 8999999995422 23789999999999
Q ss_pred HHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccc
Q 004998 130 IVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRRED 209 (720)
Q Consensus 130 Il~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~D 209 (720)
|+.||.|||++||+||||||+|||++.++.++|+|||.+........
T Consensus 132 i~~al~~lH~~~i~H~dlkp~Nil~~~~~~~~l~dfg~a~~~~~~~~--------------------------------- 178 (291)
T cd05094 132 IASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDY--------------------------------- 178 (291)
T ss_pred HHHHHHHHHhCCeeecccCcceEEEccCCcEEECCCCcccccCCCce---------------------------------
Confidence 99999999999999999999999999999999999988743211100
Q ss_pred cccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCC
Q 004998 210 LQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVS 289 (720)
Q Consensus 210 fgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s 289 (720)
. .......++..|+|||.+.+..++
T Consensus 179 ~-------------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~ 203 (291)
T cd05094 179 Y-------------------------------------------------------RVGGHTMLPIRWMPPESIMYRKFT 203 (291)
T ss_pred e-------------------------------------------------------ecCCCCCcceeecChHHhccCCCC
Confidence 0 000013467889999999988899
Q ss_pred ccccchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 290 CASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 290 ~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
.++|||||||++|||++ ||...... .....+..+..+.......+...+|+.+||+.+|++||++.++++
T Consensus 204 ~~~Di~slG~il~el~t~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~ 277 (291)
T cd05094 204 TESDVWSFGVILWEIFTYGKQPWFQLSNT-EVIECITQGRVLERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYK 277 (291)
T ss_pred chhhHHHHHHHHHHHHhCCCCCCCCCCHH-HHHHHHhCCCCCCCCccCCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence 99999999999999997 44443332 334444444333322222334569999999999999999999975
No 230
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=99.96 E-value=7.9e-29 Score=263.32 Aligned_cols=201 Identities=13% Similarity=0.107 Sum_probs=151.9
Q ss_pred eeehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC---------------CCCCHHHHHHH
Q 004998 64 KHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---------------RSVDVYECLHI 126 (720)
Q Consensus 64 ~~~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~---------------~~l~~~~~~~i 126 (720)
..+|..++.++ +||||+++++ ++.... .+|++||| .+++|.+++.+.. ..+++..++.+
T Consensus 49 ~~~E~~~l~~l~~hp~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i 124 (297)
T cd05089 49 FAGELEVLCKLGHHPNIINLLG-ACENRG---YLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQF 124 (297)
T ss_pred HHHHHHHHHhhcCCCchhheEE-EEccCC---cceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHH
Confidence 34677788888 7999999999 444433 57999999 8899999994421 24889999999
Q ss_pred HHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccc
Q 004998 127 FRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLR 206 (720)
Q Consensus 127 ~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 206 (720)
+.||+.||+|||++||+||||||+|||++.++.+||+|||++......
T Consensus 125 ~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~-------------------------------- 172 (297)
T cd05089 125 ASDVATGMQYLSEKQFIHRDLAARNVLVGENLASKIADFGLSRGEEVY-------------------------------- 172 (297)
T ss_pred HHHHHHHHHHHHHCCcccCcCCcceEEECCCCeEEECCcCCCccccce--------------------------------
Confidence 999999999999999999999999999999999999988876311000
Q ss_pred ccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC
Q 004998 207 REDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA 286 (720)
Q Consensus 207 l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 286 (720)
+ . ......+..|+|||.+.+.
T Consensus 173 ---~--~------------------------------------------------------~~~~~~~~~y~aPE~~~~~ 193 (297)
T cd05089 173 ---V--K------------------------------------------------------KTMGRLPVRWMAIESLNYS 193 (297)
T ss_pred ---e--c------------------------------------------------------cCCCCcCccccCchhhccC
Confidence 0 0 0001124569999999888
Q ss_pred CCCccccchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 287 PVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 287 ~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
.++.++|||||||++|||++ ||...... .....+..+..++......+...+|+.+||..+|.+||+++++++
T Consensus 194 ~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 270 (297)
T cd05089 194 VYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCA-ELYEKLPQGYRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISV 270 (297)
T ss_pred CCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH-HHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 89999999999999999996 66554433 333344433332222223345569999999999999999999975
No 231
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=99.96 E-value=6.2e-29 Score=261.32 Aligned_cols=204 Identities=19% Similarity=0.196 Sum_probs=154.1
Q ss_pred hcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhC---CCCCCCHHHHHHHHHHHHHHHHHHHHc-Cceec
Q 004998 70 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHSQ-GIVVH 145 (720)
Q Consensus 70 ~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~---~~~~l~~~~~~~i~~QIl~aL~yLHs~-gIvHr 145 (720)
.++.++||||+++++ .+..+. .+|++|||..++|.+++.. ....+++..++.++.||+.||.|||++ +++||
T Consensus 53 ~~~~~~~~~iv~~~~-~~~~~~---~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~ 128 (283)
T cd06617 53 SMRSVDCPYTVTFYG-ALFREG---DVWICMEVMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHR 128 (283)
T ss_pred HHHHcCCCCeeeeeE-EEecCC---cEEEEhhhhcccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecC
Confidence 456689999999999 444333 5799999977899888733 334589999999999999999999997 99999
Q ss_pred cCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccccc
Q 004998 146 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 225 (720)
Q Consensus 146 DLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~ 225 (720)
||||+||+++.++.+||+|||.+.......
T Consensus 129 dlkp~nil~~~~~~~kl~dfg~~~~~~~~~-------------------------------------------------- 158 (283)
T cd06617 129 DVKPSNVLINRNGQVKLCDFGISGYLVDSV-------------------------------------------------- 158 (283)
T ss_pred CCCHHHEEECCCCCEEEeeccccccccccc--------------------------------------------------
Confidence 999999999999999999988873221000
Q ss_pred ccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC----CCCCccccchhhhhhh
Q 004998 226 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG----APVSCASDIYRLGVLL 301 (720)
Q Consensus 226 ~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~----~~~s~~sDIwSLGvll 301 (720)
......|+..|+|||.+.+ ..++.++|||||||++
T Consensus 159 -----------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l 197 (283)
T cd06617 159 -----------------------------------------AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITM 197 (283)
T ss_pred -----------------------------------------ccccccCCccccChhhcCCcccccccCccccchhhHHHH
Confidence 0001356888999999865 3478999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
|+|++ ||..................+......+| ...+|+.+||..+|.+||++.++++||||....
T Consensus 198 ~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 268 (283)
T cd06617 198 IELATGRFPYDSWKTPFQQLKQVVEEPSPQLPAEKFSPEFQDFVNKCLKKNYKERPNYPELLQHPFFELHL 268 (283)
T ss_pred HHHHhCCCCCCccccCHHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhhhcc
Confidence 99999 55443222222333333322222222344 445999999999999999999999999999864
No 232
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.96 E-value=3.2e-29 Score=272.47 Aligned_cols=211 Identities=16% Similarity=0.212 Sum_probs=157.7
Q ss_pred eeehhhhcccCCCCCceecccceeecCC---CCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEA---AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~---~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
..+|..++.+++||||+++++ ++.... ....+|+++++.|++|.+++... .+++..++.++.||+.||.|||++
T Consensus 63 ~~~Ei~~l~~l~h~~iv~~~~-~~~~~~~~~~~~~~~lv~~~~~~~L~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~ 139 (345)
T cd07877 63 TYRELRLLKHMKHENVIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQILRGLKYIHSA 139 (345)
T ss_pred HHHHHHHHHHcCCCcccceee-eeeecccccccccEEEEehhcccCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC
Confidence 336778999999999999999 443322 22357899999889999988543 389999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004998 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+||+++.++.++|+|||++......
T Consensus 140 ~ivH~dlkp~NIll~~~~~~kl~dfg~~~~~~~~---------------------------------------------- 173 (345)
T cd07877 140 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---------------------------------------------- 173 (345)
T ss_pred CeeecCCChHHEEEcCCCCEEEeccccccccccc----------------------------------------------
Confidence 9999999999999999999999988876321000
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-CCCCccccchhhhh
Q 004998 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGV 299 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sDIwSLGv 299 (720)
.....|+++|+|||.+.+ ..++.++|||||||
T Consensus 174 -----------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~ 206 (345)
T cd07877 174 -----------------------------------------------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 206 (345)
T ss_pred -----------------------------------------------ccccccCCCccCHHHHhCccCCCchhhHHHHHH
Confidence 001357889999999876 45889999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhc-CC-----------------------CCc-c----ccccCchHHHHHHHcCCC
Q 004998 300 LLFELFC---PFSTGEEKTRTMSSLRH-RV-----------------------LPP-Q----LLLKFPKEASFCLWLLHP 347 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~-~~-----------------------~p~-~----~~~~~p~~~~li~~~L~~ 347 (720)
++|||++ ||............+.. .. .+. . +....+...+||.+||++
T Consensus 207 il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~ 286 (345)
T cd07877 207 IMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVL 286 (345)
T ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCC
Confidence 9999998 55443322111111100 00 000 0 111234556999999999
Q ss_pred CCCCCCChHHHHcCcccCCCccc
Q 004998 348 EPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 348 dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
||.+||++.++++||||.+...+
T Consensus 287 dp~~R~t~~e~l~h~~f~~~~~~ 309 (345)
T cd07877 287 DSDKRITAAQALAHAYFAQYHDP 309 (345)
T ss_pred ChhhcCCHHHHhcChhhhhcCCC
Confidence 99999999999999999976443
No 233
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=99.96 E-value=8.9e-29 Score=261.91 Aligned_cols=211 Identities=17% Similarity=0.218 Sum_probs=153.6
Q ss_pred eehhhhcccCC-CCCceecccceeecCC-CCCcEEEEEecCCCCHHHHHhCC----CCCCCHHHHHHHHHHHHHHHHHHH
Q 004998 65 HSDGVELTHGD-HLRNQGGLSGVCENEA-AIDPFVHAIEWGDVSLRQWLDKP----KRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 65 ~~e~~~Ls~l~-HpnIV~l~~~~~~~~~-~~~~~~lv~E~~ggsL~~~L~~~----~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
.+|..+++.+. ||||+++++.+..... ....+|++|||..++|.+++... ...+++..++.++.||+.||.|||
T Consensus 48 ~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH 127 (295)
T cd07837 48 LREISLLQMLSESIYIVRLLDVEHVEEKNGKPSLYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCH 127 (295)
T ss_pred HHHHHHHHHccCCCCccceeeeEeecCCCCCceEEEEeeccCcCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 35777888885 6999999994443332 23347999999666899998432 235899999999999999999999
Q ss_pred HcCceeccCCCCcEEEcc-CCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCC
Q 004998 139 SQGIVVHNVRPSCFVMSS-FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~~-~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~ 217 (720)
++||+||||||+||+++. ++.++|+|||.+..+.... .
T Consensus 128 ~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~~~~~~~~--------------------------------~--------- 166 (295)
T cd07837 128 KHGVMHRDLKPQNLLVDKQKGLLKIADLGLGRAFSIPV--------------------------------K--------- 166 (295)
T ss_pred HCCeeecCCChHHEEEecCCCeEEEeecccceecCCCc--------------------------------c---------
Confidence 999999999999999998 8899999988774321110 0
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-CCCccccchh
Q 004998 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYR 296 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwS 296 (720)
......++++|+|||.+.+. .++.++||||
T Consensus 167 -------------------------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s 197 (295)
T cd07837 167 -------------------------------------------------SYTHEIVTLWYRAPEVLLGSTHYSTPVDIWS 197 (295)
T ss_pred -------------------------------------------------ccCCcccccCCCChHHhhCCCCCCchHHHHH
Confidence 00012468899999998764 4799999999
Q ss_pred hhhhhhhccc---cCCCCchHHHHHHHhhcCC------------------CC---cc----c-cccCchHHHHHHHcCCC
Q 004998 297 LGVLLFELFC---PFSTGEEKTRTMSSLRHRV------------------LP---PQ----L-LLKFPKEASFCLWLLHP 347 (720)
Q Consensus 297 LGvll~eLlt---pf~~~~~~~~~~~~l~~~~------------------~p---~~----~-~~~~p~~~~li~~~L~~ 347 (720)
|||++|+|++ ||................. .+ +. . ....+...+||.+||.+
T Consensus 198 lG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 277 (295)
T cd07837 198 VGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRY 277 (295)
T ss_pred HHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccC
Confidence 9999999999 5655443322222111100 00 00 0 11223445999999999
Q ss_pred CCCCCCChHHHHcCcccC
Q 004998 348 EPSGRPKMGELLQSEFLN 365 (720)
Q Consensus 348 dP~~Rpta~eiL~hp~~~ 365 (720)
||.+||++.|+|.||||+
T Consensus 278 ~P~~R~~~~eil~~~~~~ 295 (295)
T cd07837 278 DPAKRISAKAALTHPYFD 295 (295)
T ss_pred ChhhcCCHHHHhcCCCcC
Confidence 999999999999999985
No 234
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.96 E-value=3.6e-29 Score=257.16 Aligned_cols=195 Identities=17% Similarity=0.150 Sum_probs=147.0
Q ss_pred hhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccC
Q 004998 69 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 147 (720)
Q Consensus 69 ~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDL 147 (720)
..+....||||+++++ ++... ..+|++||| .|++|.+++.+.. .+++..+..++.||+.||.|||++||+||||
T Consensus 37 ~~~~~~~~~~i~~~~~-~~~~~---~~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dl 111 (237)
T cd05576 37 LTIIPHCVPNMVCLHK-YIVSE---DSVFLVLQHAEGGKLWSHISKFL-NIPEECVKRWAAEMVVALDALHREGIVCRDL 111 (237)
T ss_pred HHHHhcCCCceeehhh-heecC---CeEEEEEecCCCCCHHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHhCCeeccCC
Confidence 3444567999999999 44433 268999999 8999999995543 4999999999999999999999999999999
Q ss_pred CCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccccccc
Q 004998 148 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 227 (720)
Q Consensus 148 KP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q 227 (720)
||+||+++.++.++++|||.+...+...
T Consensus 112 kp~Nil~~~~~~~~l~df~~~~~~~~~~---------------------------------------------------- 139 (237)
T cd05576 112 NPNNILLDDRGHIQLTYFSRWSEVEDSC---------------------------------------------------- 139 (237)
T ss_pred CHHHEEEcCCCCEEEecccchhcccccc----------------------------------------------------
Confidence 9999999999999999888663211000
Q ss_pred CCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhcccc
Q 004998 228 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFCP 307 (720)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLltp 307 (720)
....++..|+|||.+.+..++.++||||+||++|||+++
T Consensus 140 -----------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g 178 (237)
T cd05576 140 -----------------------------------------DGEAVENMYCAPEVGGISEETEACDWWSLGAILFELLTG 178 (237)
T ss_pred -----------------------------------------ccCCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHC
Confidence 002346779999999888899999999999999999995
Q ss_pred CCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCCh-----HHHHcCccc
Q 004998 308 FSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM-----GELLQSEFL 364 (720)
Q Consensus 308 f~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta-----~eiL~hp~~ 364 (720)
..................+|+. ..+...+||.+||+.||++||++ +++++||||
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h~~~ 237 (237)
T cd05576 179 KTLVECHPSGINTHTTLNIPEW---VSEEARSLLQQLLQFNPTERLGAGVAGVEDIKSHPFF 237 (237)
T ss_pred cchhhcCchhcccccccCCccc---CCHHHHHHHHHHccCCHHHhcCCCccchHHHHcCCCC
Confidence 4322111000000000112211 22445699999999999999986 999999997
No 235
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=99.96 E-value=1e-28 Score=261.25 Aligned_cols=207 Identities=18% Similarity=0.253 Sum_probs=154.6
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..+|..++..++||||+++++ ++..+. ..|++|||.+++|.+++......+++..++.++.||+.||.|||+.||+
T Consensus 50 ~~~e~~~l~~l~h~ni~~~~~-~~~~~~---~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~ 125 (291)
T cd07870 50 AIREASLLKGLKHANIVLLHD-IIHTKE---TLTFVFEYMHTDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHIL 125 (291)
T ss_pred HHHHHHHHHhcCCCCEeEEEE-EEecCC---eEEEEEecccCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 346778899999999999999 454443 5799999966889888855445588999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
|+||||+||+++.++.++|+|||.++.......
T Consensus 126 H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~----------------------------------------------- 158 (291)
T cd07870 126 HRDLKPQNLLISYLGELKLADFGLARAKSIPSQ----------------------------------------------- 158 (291)
T ss_pred cCCCChHHEEEcCCCcEEEeccccccccCCCCC-----------------------------------------------
Confidence 999999999999999999999988743211100
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-CCCccccchhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLF 302 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGvll~ 302 (720)
......+++.|+|||.+.+. .++.++|||||||++|
T Consensus 159 -------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~ 195 (291)
T cd07870 159 -------------------------------------------TYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFI 195 (291)
T ss_pred -------------------------------------------CCCCccccccccCCceeecCCCCCcHHHHHHHHHHHH
Confidence 00012468899999998764 3788999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhc--C-----------------------CCCccc------cccCchHHHHHHHcCCCC
Q 004998 303 ELFC---PFSTGEEKTRTMSSLRH--R-----------------------VLPPQL------LLKFPKEASFCLWLLHPE 348 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~--~-----------------------~~p~~~------~~~~p~~~~li~~~L~~d 348 (720)
||++ ||............+.. + ..+..+ ....+...+|+.+||..|
T Consensus 196 ~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~d 275 (291)
T cd07870 196 EMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMF 275 (291)
T ss_pred HHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcC
Confidence 9999 56543332222211110 0 000000 011234459999999999
Q ss_pred CCCCCChHHHHcCccc
Q 004998 349 PSGRPKMGELLQSEFL 364 (720)
Q Consensus 349 P~~Rpta~eiL~hp~~ 364 (720)
|.+|||+.|++.||||
T Consensus 276 p~~R~t~~~~l~h~~~ 291 (291)
T cd07870 276 PKDRISAQDALLHPYF 291 (291)
T ss_pred cccCcCHHHHhcCCCC
Confidence 9999999999999997
No 236
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=99.96 E-value=8.1e-29 Score=260.30 Aligned_cols=206 Identities=17% Similarity=0.210 Sum_probs=158.4
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~-~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.|..+|.+++||||+++++ .++... .+|++||| .+++|.+++.+.. ..+++.+++.++.||+.||.|||+.||+
T Consensus 42 ~e~~~l~~l~~~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~ 117 (277)
T cd05577 42 NEKKILEKVSSRFIVSLAY-AFETKD---DLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIV 117 (277)
T ss_pred HHHHHHHhCCCCCEeeeee-EEecCC---eEEEEEecCCCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 5778899999999999998 554443 67999999 8899999995433 3589999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||+|+||+++.++.++|+|||.+...... ..
T Consensus 118 H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~---------------------------------~~-------------- 150 (277)
T cd05577 118 YRDLKPENVLLDDHGNVRISDLGLAVELKGG---------------------------------KK-------------- 150 (277)
T ss_pred cCCCCHHHEEECCCCCEEEccCcchhhhccC---------------------------------Cc--------------
Confidence 9999999999999999999998876321100 00
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
.....++..|+|||.+.+..++.++|||||||++|+
T Consensus 151 --------------------------------------------~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~ 186 (277)
T cd05577 151 --------------------------------------------IKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYE 186 (277)
T ss_pred --------------------------------------------cccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHH
Confidence 001246788999999988889999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcC--CCCccccc-cCchHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCC
Q 004998 304 LFC---PFSTGEEKTRTMSSLRHR--VLPPQLLL-KFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~--~~p~~~~~-~~p~~~~li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~ 367 (720)
|++ ||....... ....+... ..+..... ..+...+||.+||+.||.+|| ++.+++.||||...
T Consensus 187 l~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h~~~~~~ 260 (277)
T cd05577 187 MIAGRSPFRQRKEKV-EKEELKRRTLEMAVEYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREHPLFKDL 260 (277)
T ss_pred HhhCCCCCCCCcccc-cHHHHHhccccccccCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHhChhhhcC
Confidence 999 665432210 11111111 11222222 234556999999999999999 88889999999765
No 237
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=99.96 E-value=7.3e-29 Score=266.05 Aligned_cols=203 Identities=15% Similarity=0.122 Sum_probs=155.8
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
...|..+++.++||||+++++ ++... ..++++|| .+|+|.+++......+++..++.++.||+.||+|||++||
T Consensus 56 ~~~e~~~l~~l~h~niv~~~g-~~~~~----~~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i 130 (316)
T cd05108 56 ILDEAYVMASVDNPHVCRLLG-ICLTS----TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRL 130 (316)
T ss_pred HHHHHHHHHhCCCCCCCeEEE-EEcCC----CceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCe
Confidence 336777999999999999999 44433 35788998 9999999997665568999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.+||+|||++......... +
T Consensus 131 iH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~--------------------------------~------------ 166 (316)
T cd05108 131 VHRDLAARNVLVKTPQHVKITDFGLAKLLGADEKE--------------------------------Y------------ 166 (316)
T ss_pred eccccchhheEecCCCcEEEccccccccccCCCcc--------------------------------e------------
Confidence 99999999999999999999999887443211000 0
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......++..|+|||++.+..++.++|||||||++|
T Consensus 167 --------------------------------------------~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~ 202 (316)
T cd05108 167 --------------------------------------------HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVW 202 (316)
T ss_pred --------------------------------------------eccCCccceeecChHHhccCCCCchhhhHHHHHHHH
Confidence 000013466799999999888999999999999999
Q ss_pred hccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 303 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 303 eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
||++ ||..... ......+.....++..........+++.+||..+|.+||++.+++.
T Consensus 203 el~t~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~ 263 (316)
T cd05108 203 ELMTFGSKPYDGIPA-SEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELII 263 (316)
T ss_pred HHHcCCCCCCCCCCH-HHHHHHHhCCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 9986 5544322 2333333333333333333455669999999999999999999986
No 238
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.96 E-value=1.1e-28 Score=256.44 Aligned_cols=198 Identities=16% Similarity=0.242 Sum_probs=155.1
Q ss_pred hcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCC
Q 004998 70 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 148 (720)
Q Consensus 70 ~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLK 148 (720)
+....+||||+++++ .+.... .+|++||| .|++|.+++.... .+++..+..++.||+.||.|||+.||+|+||+
T Consensus 50 ~~~~~~~~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~ 124 (260)
T cd05611 50 MMIQGESPYVAKLYY-SFQSKD---YLYLVMEYLNGGDCASLIKTLG-GLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIK 124 (260)
T ss_pred HhhcCCCCCeeeeee-eEEcCC---eEEEEEeccCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCC
Confidence 455679999999999 454433 68999999 8999999995543 48999999999999999999999999999999
Q ss_pred CCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccC
Q 004998 149 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 228 (720)
Q Consensus 149 P~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~ 228 (720)
|+||+++.++.++|+|||.+......
T Consensus 125 p~nil~~~~~~~~l~dfg~~~~~~~~------------------------------------------------------ 150 (260)
T cd05611 125 PENLLIDQTGHLKLTDFGLSRNGLEN------------------------------------------------------ 150 (260)
T ss_pred HHHeEECCCCcEEEeecccceecccc------------------------------------------------------
Confidence 99999999999999988876321000
Q ss_pred CCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhccc--
Q 004998 229 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 306 (720)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt-- 306 (720)
....|++.|+|||.+.+..++.++||||||+++|+|++
T Consensus 151 ----------------------------------------~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~ 190 (260)
T cd05611 151 ----------------------------------------KKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGY 190 (260)
T ss_pred ----------------------------------------ccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCC
Confidence 01356888999999988889999999999999999998
Q ss_pred -cCCCCchHHHHHHHhhcC--CCCccccccC-chHHHHHHHcCCCCCCCCCCh---HHHHcCcccCCC
Q 004998 307 -PFSTGEEKTRTMSSLRHR--VLPPQLLLKF-PKEASFCLWLLHPEPSGRPKM---GELLQSEFLNEP 367 (720)
Q Consensus 307 -pf~~~~~~~~~~~~l~~~--~~p~~~~~~~-p~~~~li~~~L~~dP~~Rpta---~eiL~hp~~~~~ 367 (720)
||...... .....+... ..++...... +...+||.+||+.+|++||++ .|+|.||||...
T Consensus 191 ~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~~~~~~~ 257 (260)
T cd05611 191 PPFHAETPD-AVFDNILSRRINWPEEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKSHPFFKSI 257 (260)
T ss_pred CCCCCCCHH-HHHHHHHhcccCCCCcccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHcChHhhcC
Confidence 66554433 233333222 2233333333 445699999999999999954 799999999765
No 239
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=99.96 E-value=1.2e-28 Score=259.50 Aligned_cols=205 Identities=17% Similarity=0.233 Sum_probs=153.4
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..|..++.+++||||+++++ .+.... .++++||| .+++|..++... ..+++..++.++.||+.||.|||++||+
T Consensus 48 ~~e~~~l~~~~h~~i~~~~~-~~~~~~---~~~~v~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~ql~~~l~~LH~~~i~ 122 (286)
T cd07847 48 LREIRMLKQLKHPNLVNLIE-VFRRKR---KLHLVFEYCDHTVLNELEKNP-RGVPEHLIKKIIWQTLQAVNFCHKHNCI 122 (286)
T ss_pred HHHHHHHHhCCCCCEeeeee-EEeeCC---EEEEEEeccCccHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCce
Confidence 36777999999999999999 554443 57999999 777777766443 3599999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
|+||||+||+++.++.++|+|||.+........
T Consensus 123 H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~----------------------------------------------- 155 (286)
T cd07847 123 HRDVKPENILITKQGQIKLCDFGFARILTGPGD----------------------------------------------- 155 (286)
T ss_pred ecCCChhhEEEcCCCcEEECccccceecCCCcc-----------------------------------------------
Confidence 999999999999999999999888733211000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-CCCccccchhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLF 302 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGvll~ 302 (720)
......++.+|+|||.+.+. .++.++|||||||++|
T Consensus 156 -------------------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~ 192 (286)
T cd07847 156 -------------------------------------------DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFA 192 (286)
T ss_pred -------------------------------------------cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHH
Confidence 00013468899999998764 4789999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhc--C------------------CCCc-c--------ccccCchHHHHHHHcCCCCCC
Q 004998 303 ELFC---PFSTGEEKTRTMSSLRH--R------------------VLPP-Q--------LLLKFPKEASFCLWLLHPEPS 350 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~--~------------------~~p~-~--------~~~~~p~~~~li~~~L~~dP~ 350 (720)
||++ ||............... . ..|. . +....+...+|+.+||+++|+
T Consensus 193 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~ 272 (286)
T cd07847 193 ELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPT 272 (286)
T ss_pred HHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCcc
Confidence 9999 56544333222211100 0 0000 0 111123345999999999999
Q ss_pred CCCChHHHHcCccc
Q 004998 351 GRPKMGELLQSEFL 364 (720)
Q Consensus 351 ~Rpta~eiL~hp~~ 364 (720)
+||++.|++.||||
T Consensus 273 ~Rp~~~eil~~~~f 286 (286)
T cd07847 273 ERLSCEELLEHPYF 286 (286)
T ss_pred ccCCHHHHhcCCCC
Confidence 99999999999997
No 240
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=99.96 E-value=1e-28 Score=256.23 Aligned_cols=201 Identities=17% Similarity=0.209 Sum_probs=154.2
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|..++.+++||||+++++ ++.... .+|++||| .|++|.+++......+++..++.++.||+.||.|||++||+|
T Consensus 48 ~e~~~l~~l~~~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H 123 (256)
T cd05059 48 EEAKVMMKLSHPNLVQLYG-VCTKQR---PIFIVTEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIH 123 (256)
T ss_pred HHHHHHHhCCCCCEEEEEE-EEcCCC---ceEEEEecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 5777899999999999999 444433 57999999 899999999655456899999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+||+++.++.+||+|||.+.........
T Consensus 124 ~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~----------------------------------------------- 156 (256)
T cd05059 124 RDLAARNCLVGEDNVVKVSDFGLARYVLDDQYT----------------------------------------------- 156 (256)
T ss_pred ccccHhhEEECCCCcEEECCcccceeccccccc-----------------------------------------------
Confidence 999999999999999999998877432111000
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhc
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 304 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eL 304 (720)
+ .....++..|+|||.+.+..++.++|||||||++|||
T Consensus 157 ~------------------------------------------~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l 194 (256)
T cd05059 157 S------------------------------------------SQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEV 194 (256)
T ss_pred c------------------------------------------cCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHH
Confidence 0 0001234579999999988899999999999999999
Q ss_pred cc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 305 FC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 305 lt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
++ ||...... .....+.....++......+...+++.+||+.+|++|||+.++++
T Consensus 195 ~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~ 253 (256)
T cd05059 195 FSEGKMPYERFSNS-EVVESVSAGYRLYRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLS 253 (256)
T ss_pred hccCCCCCCCCCHH-HHHHHHHcCCcCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 97 55443332 333444433222222223344559999999999999999999986
No 241
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=99.96 E-value=7.3e-29 Score=258.53 Aligned_cols=204 Identities=21% Similarity=0.265 Sum_probs=158.6
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHh---CCCCCCCHHHHHHHHHHHHHHHHHHH
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLD---KPKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~---~~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
+...|..++++++||||+++++ .+.... ..+++||| .+++|.+++. .....+++..++.++.||+.||.|||
T Consensus 48 ~~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH 123 (267)
T cd08228 48 DCVKEIDLLKQLNHPNVIKYLD-SFIEDN---ELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMH 123 (267)
T ss_pred HHHHHHHHHHhCCCcceeeeee-eEEECC---eEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHh
Confidence 3446788999999999999999 444432 57999999 8899999883 23345899999999999999999999
Q ss_pred HcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCC
Q 004998 139 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
++||+|+||||+||+++.++.++++|||.+........
T Consensus 124 ~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~~------------------------------------------ 161 (267)
T cd08228 124 SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT------------------------------------------ 161 (267)
T ss_pred hCCeeCCCCCHHHEEEcCCCCEEECccccceeccchhH------------------------------------------
Confidence 99999999999999999999999999887733211000
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhh
Q 004998 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
......|++.|+|||.+.+..++.++||||||
T Consensus 162 ------------------------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG 193 (267)
T cd08228 162 ------------------------------------------------AAHSLVGTPYYMSPERIHENGYNFKSDIWSLG 193 (267)
T ss_pred ------------------------------------------------HHhcCCCCccccChhhhccCCCCchhhHHHHH
Confidence 00013578899999999888899999999999
Q ss_pred hhhhhccc---cCCCCc-hHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 299 VLLFELFC---PFSTGE-EKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 299 vll~eLlt---pf~~~~-~~~~~~~~l~~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|++|||++ ||.... ........+.....++......+ ...+|+.+||..+|++||++.++++
T Consensus 194 ~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~ 260 (267)
T cd08228 194 CLLYEMAALQSPFYGDKMNLFSLCQKIEQCDYPPLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQ 260 (267)
T ss_pred HHHHHHhcCCCCCccccccHHHHHHHHhcCCCCCCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHH
Confidence 99999998 554432 22334444444445554443444 4569999999999999999999986
No 242
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.96 E-value=4.7e-29 Score=270.94 Aligned_cols=211 Identities=16% Similarity=0.230 Sum_probs=159.0
Q ss_pred eeehhhhcccCCCCCceecccceeecCCC---CCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAA---IDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~---~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
..+|..+|.+++||||+++++ ++..... ...+++||||.|++|.+++.. ..+++..++.++.||+.||.|||+.
T Consensus 61 ~~~E~~~l~~l~h~~iv~~~~-~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~--~~l~~~~~~~i~~qi~~al~~LH~~ 137 (343)
T cd07880 61 AYRELRLLKHMKHENVIGLLD-VFTPDLSLDRFHDFYLVMPFMGTDLGKLMKH--EKLSEDRIQFLVYQMLKGLKYIHAA 137 (343)
T ss_pred HHHHHHHHHhcCCCCccceee-eecCCccccccceEEEEEecCCCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 336788999999999999999 4443322 234799999988899998854 3489999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004998 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+||+++.++.++++|||.+......
T Consensus 138 gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~---------------------------------------------- 171 (343)
T cd07880 138 GIIHRDLKPGNLAVNEDCELKILDFGLARQTDSE---------------------------------------------- 171 (343)
T ss_pred CeecCCCCHHHEEEcCCCCEEEeecccccccccC----------------------------------------------
Confidence 9999999999999999999999999877321100
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-CCCccccchhhhh
Q 004998 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGV 299 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGv 299 (720)
.....+++.|+|||.+.+. .++.++|||||||
T Consensus 172 -----------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ 204 (343)
T cd07880 172 -----------------------------------------------MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGC 204 (343)
T ss_pred -----------------------------------------------ccccccCCcccCHHHHhCCCCCCcHHHHHHHHH
Confidence 0013568899999998763 4889999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhcCCC-------------------------Ccc---c-cccCchHHHHHHHcCCC
Q 004998 300 LLFELFC---PFSTGEEKTRTMSSLRHRVL-------------------------PPQ---L-LLKFPKEASFCLWLLHP 347 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~~~~-------------------------p~~---~-~~~~p~~~~li~~~L~~ 347 (720)
++|+|++ ||............+..... +.. + ....+...+++.+||+.
T Consensus 205 ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~ 284 (343)
T cd07880 205 IMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVL 284 (343)
T ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCC
Confidence 9999999 56544332222211110000 000 1 11223445999999999
Q ss_pred CCCCCCChHHHHcCcccCCCccc
Q 004998 348 EPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 348 dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
||.+|||+.+++.||||......
T Consensus 285 dP~~R~t~~~~l~~~~~~~~~~~ 307 (343)
T cd07880 285 DAESRITAAEALAHPYFEEFHDP 307 (343)
T ss_pred ChhhCCCHHHHhcCccHhhhcCc
Confidence 99999999999999999986443
No 243
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=99.96 E-value=9.3e-29 Score=257.05 Aligned_cols=201 Identities=17% Similarity=0.216 Sum_probs=148.4
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|..++..++||||+++++ ++..+. ..++|||| .+++|.+++......+++..++.++.||+.||.|||++||+|
T Consensus 48 ~e~~~l~~~~h~~iv~~~~-~~~~~~---~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH 123 (258)
T cd05078 48 EAASMMSQLSHKHLVLNYG-VCVCGD---ESIMVQEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTH 123 (258)
T ss_pred HHHHHHHhCCCCChhheee-EEEeCC---CcEEEEecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 5667889999999999999 444433 46899999 899999999665556899999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+||+++.++..++.+++.. +++|||++.....
T Consensus 124 ~dlkp~nili~~~~~~~~~~~~~~-------------------------------------~l~d~g~~~~~~~------ 160 (258)
T cd05078 124 GNVCAKNVLLIREEDRKTGNPPFI-------------------------------------KLSDPGISITVLP------ 160 (258)
T ss_pred CCCccceEEEecccccccCCCceE-------------------------------------EecccccccccCC------
Confidence 999999999998776544333221 2345544321110
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-CCCccccchhhhhhhhh
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFE 303 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGvll~e 303 (720)
.....+++.|+|||++.+. .++.++|||||||++||
T Consensus 161 -------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ 197 (258)
T cd05078 161 -------------------------------------------KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWE 197 (258)
T ss_pred -------------------------------------------chhccccCCccCchhccCCCCCCchhhHHHHHHHHHH
Confidence 0013567889999999874 47999999999999999
Q ss_pred cccc----CCCCchHHHHHHHhhc-CCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 304 LFCP----FSTGEEKTRTMSSLRH-RVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 304 Lltp----f~~~~~~~~~~~~l~~-~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|+++ |...... ........ ..+|+ ..+++..+|+.+||+.||++|||+++|++
T Consensus 198 l~~g~~~~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~li~~~l~~~p~~Rps~~~il~ 255 (258)
T cd05078 198 IFSGGDKPLSALDSQ-KKLQFYEDRHQLPA---PKWTELANLINQCMDYEPDFRPSFRAIIR 255 (258)
T ss_pred HHcCCCCChhhccHH-HHHHHHHccccCCC---CCcHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 9993 2222221 11211111 12222 34466779999999999999999999986
No 244
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=99.96 E-value=7.9e-29 Score=260.37 Aligned_cols=207 Identities=19% Similarity=0.254 Sum_probs=161.0
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++++++||||+++++ .+.++. .+|+|||| .|++|.+++... ++++..+..++.||+.||+|||+.|
T Consensus 48 ~~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~i~~~--~l~~~~~~~~~~~l~~~l~~lh~~~ 121 (277)
T cd06640 48 DIQQEITVLSQCDSPYVTKYYG-SYLKGT---KLWIIMEYLGGGSALDLLRAG--PFDEFQIATMLKEILKGLDYLHSEK 121 (277)
T ss_pred HHHHHHHHHHhCCCCCEeeEEE-EEEECC---EEEEEEecCCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3446777899999999999999 554443 68999999 899999999543 4899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
++|+||+|+||+++.++.++++|||.+....... .
T Consensus 122 ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~----------------------------------~----------- 156 (277)
T cd06640 122 KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ----------------------------------I----------- 156 (277)
T ss_pred ccCcCCChhhEEEcCCCCEEEcccccceeccCCc----------------------------------c-----------
Confidence 9999999999999999999999988773321100 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......++..|+|||.+.+..++.++|+|||||++
T Consensus 157 ---------------------------------------------~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il 191 (277)
T cd06640 157 ---------------------------------------------KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITA 191 (277)
T ss_pred ---------------------------------------------ccccccCcccccCHhHhccCCCccHHHHHHHHHHH
Confidence 00013568899999999888899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|||++ ||...... .....+... .++.+.... +...+|+.+||+.+|++||++.++++||||...
T Consensus 192 ~el~tg~~p~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 259 (277)
T cd06640 192 IELAKGEPPNSDMHPM-RVLFLIPKN-NPPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKHKFIVKN 259 (277)
T ss_pred HHHHHCCCCCCCcChH-hHhhhhhcC-CCCCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhChHhhhc
Confidence 99999 45433322 222222222 233333333 344599999999999999999999999999765
No 245
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=99.96 E-value=1.4e-28 Score=256.27 Aligned_cols=200 Identities=19% Similarity=0.208 Sum_probs=153.4
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
+|..+|..++||||+++++ ++..+. .++++||| .+++|.+++.. ....+++..++.++.||+.||.|||++|++
T Consensus 51 ~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~ 126 (263)
T cd05052 51 KEAAVMKEIKHPNLVQLLG-VCTREP---PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFI 126 (263)
T ss_pred HHHHHHHhCCCCChhheEE-EEcCCC---CcEEEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEe
Confidence 5777899999999999999 444433 57999999 89999999954 334589999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+||++++++.++|+|||.+.........
T Consensus 127 H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~---------------------------------------------- 160 (263)
T cd05052 127 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT---------------------------------------------- 160 (263)
T ss_pred ecccCcceEEEcCCCcEEeCCCccccccccceee----------------------------------------------
Confidence 9999999999999999999988887332111000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......++..|+|||.+.+..++.++|||||||++||
T Consensus 161 -------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e 197 (263)
T cd05052 161 -------------------------------------------AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 197 (263)
T ss_pred -------------------------------------------ccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHH
Confidence 0000123567999999988889999999999999999
Q ss_pred ccc----cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 304 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 304 Llt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|++ ||..... ......+..... +...... +...+|+.+||..+|++||++.++++
T Consensus 198 l~t~g~~p~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~ 257 (263)
T cd05052 198 IATYGMSPYPGIDL-SQVYELLEKGYR-MERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQ 257 (263)
T ss_pred HHcCCCCCCCCCCH-HHHHHHHHCCCC-CCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 997 5554332 233344443322 2233333 44559999999999999999999976
No 246
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.96 E-value=7.9e-29 Score=256.87 Aligned_cols=217 Identities=17% Similarity=0.216 Sum_probs=163.2
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+...|..++.+++||||+++++ .+..+ ..+|++||| .+++|.+++.+.+ .+++..++.++.||+.||.|||++|
T Consensus 39 ~~~~e~~~l~~~~h~~i~~~~~-~~~~~---~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~L~~lH~~~ 113 (265)
T cd05579 39 QVLTERDILSQAQSPYVVKLYY-SFQGK---KNLYLVMEYLPGGDLASLLENVG-SLDEDVARIYIAEIVLALEYLHSNG 113 (265)
T ss_pred HHHHHHHHHHhCCCcchhHHHH-heecC---cEEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcC
Confidence 3346677899999999999999 44443 267999999 7899999996544 5999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+|+||+|+||+++.++.++|+|||++......... .. .
T Consensus 114 i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~-------------------------------~~------~---- 152 (265)
T cd05579 114 IIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQI-------------------------------NL------N---- 152 (265)
T ss_pred eecCCCCHHHeEEcCCCCEEEEecccchhcccCccc-------------------------------cc------c----
Confidence 999999999999999999999999987432111000 00 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
..........++..|+|||.+.+..++.++|||||||++
T Consensus 153 -----------------------------------------~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~ 191 (265)
T cd05579 153 -----------------------------------------DDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCIL 191 (265)
T ss_pred -----------------------------------------cccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHH
Confidence 000000114578899999999888899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCC-ccccccCchHHHHHHHcCCCCCCCCCCh---HHHHcCcccCCC
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRHRVLP-PQLLLKFPKEASFCLWLLHPEPSGRPKM---GELLQSEFLNEP 367 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p-~~~~~~~p~~~~li~~~L~~dP~~Rpta---~eiL~hp~~~~~ 367 (720)
|+|++ ||...... .....+..+.++ +......+...+|+.+||+.+|.+|||+ .++|+||||+..
T Consensus 192 ~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~~~~~~~ 263 (265)
T cd05579 192 YEFLVGIPPFHGETPE-EIFQNILNGKIEWPEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNHPFFKGI 263 (265)
T ss_pred HHHHhCCCCCCCCCHH-HHHHHHhcCCcCCCccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcCccccCC
Confidence 99999 66544433 233333332222 2221123455699999999999999999 999999999864
No 247
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.96 E-value=7.7e-29 Score=269.10 Aligned_cols=209 Identities=16% Similarity=0.248 Sum_probs=157.2
Q ss_pred eehhhhcccCCCCCceecccceeecCC---CCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEA---AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~---~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
.+|..++.+++||||+++++ ++.... ....+|++|||...+|.+++. ..+++..+..++.||+.||.|||++|
T Consensus 62 ~~e~~~l~~l~h~niv~~~~-~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~---~~~~~~~~~~~~~qi~~aL~~LH~~~ 137 (342)
T cd07879 62 YRELTLLKHMQHENVIGLLD-VFTSAVSGDEFQDFYLVMPYMQTDLQKIMG---HPLSEDKVQYLVYQMLCGLKYIHSAG 137 (342)
T ss_pred HHHHHHHHhcCCCCccchhh-eecccccCCCCceEEEEecccccCHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 46788999999999999999 443322 223579999996678888762 24899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++.++|+|||++......
T Consensus 138 i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~~~----------------------------------------------- 170 (342)
T cd07879 138 IIHRDLKPGNLAVNEDCELKILDFGLARHADAE----------------------------------------------- 170 (342)
T ss_pred cccCCCCHHHEEECCCCCEEEeeCCCCcCCCCC-----------------------------------------------
Confidence 999999999999999999999999877321000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-CCCccccchhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVL 300 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGvl 300 (720)
.....+++.|+|||.+.+. .++.++|||||||+
T Consensus 171 ----------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvi 204 (342)
T cd07879 171 ----------------------------------------------MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCI 204 (342)
T ss_pred ----------------------------------------------CCCceeeecccChhhhcCccccCchHHHHHHHHH
Confidence 0013568899999998764 48999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcC------------------------CCC-cc----ccccCchHHHHHHHcCCCC
Q 004998 301 LFELFC---PFSTGEEKTRTMSSLRHR------------------------VLP-PQ----LLLKFPKEASFCLWLLHPE 348 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~------------------------~~p-~~----~~~~~p~~~~li~~~L~~d 348 (720)
+|||++ ||............+... ..+ .. +....+...+|+.+||+.|
T Consensus 205 l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~d 284 (342)
T cd07879 205 MAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELD 284 (342)
T ss_pred HHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCC
Confidence 999999 665543222111111100 000 00 1122334569999999999
Q ss_pred CCCCCChHHHHcCcccCCCccc
Q 004998 349 PSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 349 P~~Rpta~eiL~hp~~~~~~~~ 370 (720)
|.+||++.+++.||||......
T Consensus 285 P~~R~~~~e~l~h~~f~~~~~~ 306 (342)
T cd07879 285 VDKRLTATEALEHPYFDSFRDA 306 (342)
T ss_pred hhhCcCHHHHhcCcchhhcccc
Confidence 9999999999999999987553
No 248
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=99.96 E-value=4.5e-29 Score=262.07 Aligned_cols=207 Identities=18% Similarity=0.221 Sum_probs=159.8
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++++++||||+++++ ++.... .+|+|||| .+++|.+++.. ..+++..++.++.||+.||.|||++|
T Consensus 48 ~~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~ 121 (277)
T cd06642 48 DIQQEITVLSQCDSPYITRYYG-SYLKGT---KLWIIMEYLGGGSALDLLKP--GPLEETYIATILREILKGLDYLHSER 121 (277)
T ss_pred HHHHHHHHHHcCCCCccHhhhc-ccccCC---ceEEEEEccCCCcHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhcCC
Confidence 3447788999999999999999 444433 57999999 88999998854 34899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+|+||+|+||+++.++.++++|||++....... .
T Consensus 122 ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~----------------------------------~----------- 156 (277)
T cd06642 122 KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ----------------------------------I----------- 156 (277)
T ss_pred eeccCCChheEEEeCCCCEEEccccccccccCcc----------------------------------h-----------
Confidence 9999999999999999999999888773221000 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......|+..|+|||.+.+..++.++|||||||++
T Consensus 157 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il 191 (277)
T cd06642 157 ---------------------------------------------KRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITA 191 (277)
T ss_pred ---------------------------------------------hhhcccCcccccCHHHhCcCCCchhhhHHHHHHHH
Confidence 00013578899999999888899999999999999
Q ss_pred hhcccc---CCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 302 FELFCP---FSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 302 ~eLltp---f~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|||+++ |...... .....+... .++.+....+ ...+|+.+||+.+|.+||++.++++||||...
T Consensus 192 ~el~tg~~p~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 259 (277)
T cd06642 192 IELAKGEPPNSDLHPM-RVLFLIPKN-SPPTLEGQYSKPFKEFVEACLNKDPRFRPTAKELLKHKFITRY 259 (277)
T ss_pred HHHHhCCCCCcccchh-hHHhhhhcC-CCCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHhHHHHHH
Confidence 999994 4322222 112222222 2333333333 34599999999999999999999999998764
No 249
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=99.96 E-value=1e-28 Score=261.97 Aligned_cols=209 Identities=16% Similarity=0.229 Sum_probs=157.1
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCceec
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 145 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHr 145 (720)
.|..++.+++||||+++++ ++.+. ..+++||||.+++|.+++......+++..++.++.||+.||.|||++||+|+
T Consensus 51 ~e~~~l~~~~h~~i~~~~~-~~~~~---~~~~lv~e~~~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~ 126 (298)
T cd07841 51 REIKLLQELKHPNIIGLLD-VFGHK---SNINLVFEFMETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILHR 126 (298)
T ss_pred HHHHHHhhcCCCCChhhhh-eeecC---CEEEEEEcccCCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeec
Confidence 5777899999999999999 55443 2679999998889999996554469999999999999999999999999999
Q ss_pred cCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccccc
Q 004998 146 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 225 (720)
Q Consensus 146 DLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~ 225 (720)
||||+||+++.++.++|+|||.+...+....
T Consensus 127 dl~p~nill~~~~~~~l~dfg~~~~~~~~~~------------------------------------------------- 157 (298)
T cd07841 127 DLKPNNLLIASDGVLKLADFGLARSFGSPNR------------------------------------------------- 157 (298)
T ss_pred CCChhhEEEcCCCCEEEccceeeeeccCCCc-------------------------------------------------
Confidence 9999999999999999999888743321100
Q ss_pred ccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-CCCccccchhhhhhhhhc
Q 004998 226 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFEL 304 (720)
Q Consensus 226 ~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGvll~eL 304 (720)
......+++.|+|||.+.+. .++.++|||||||++|||
T Consensus 158 -----------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~ 196 (298)
T cd07841 158 -----------------------------------------KMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAEL 196 (298)
T ss_pred -----------------------------------------cccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHH
Confidence 00012457889999998654 478999999999999999
Q ss_pred ccc---CCCCchHHHHHHHhhcCC-C---------------------Ccc-----ccccCchHHHHHHHcCCCCCCCCCC
Q 004998 305 FCP---FSTGEEKTRTMSSLRHRV-L---------------------PPQ-----LLLKFPKEASFCLWLLHPEPSGRPK 354 (720)
Q Consensus 305 ltp---f~~~~~~~~~~~~l~~~~-~---------------------p~~-----~~~~~p~~~~li~~~L~~dP~~Rpt 354 (720)
+++ |...... .....+.... . ++. +........+||.+||.++|++|||
T Consensus 197 ~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s 275 (298)
T cd07841 197 LLRVPFLPGDSDI-DQLGKIFEALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRIT 275 (298)
T ss_pred HcCCccccCCccH-HHHHHHHHHcCCCchhhhhhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcC
Confidence 993 3322221 1111111000 0 000 0111234458999999999999999
Q ss_pred hHHHHcCcccCCCcc
Q 004998 355 MGELLQSEFLNEPRD 369 (720)
Q Consensus 355 a~eiL~hp~~~~~~~ 369 (720)
+.|+|+||||.+...
T Consensus 276 ~~e~l~~~~~~~~~~ 290 (298)
T cd07841 276 ARQALEHPYFSNDPA 290 (298)
T ss_pred HHHHhhCccccCCCC
Confidence 999999999998643
No 250
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=99.96 E-value=1.3e-28 Score=258.59 Aligned_cols=203 Identities=17% Similarity=0.174 Sum_probs=156.2
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC-------------CCCCHHHHHHHHHHH
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-------------RSVDVYECLHIFRQI 130 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~-------------~~l~~~~~~~i~~QI 130 (720)
.+|..+|..++||||+++++ ++... ...+++||| .+++|.++|...+ ..+++..+..++.||
T Consensus 56 ~~e~~~l~~l~~~~i~~~~~-~~~~~---~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i 131 (280)
T cd05049 56 EREAELLTNFQHENIVKFYG-VCTEG---DPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQI 131 (280)
T ss_pred HHHHHHHHhcCCCCchheee-EEecC---CCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHH
Confidence 36777899999999999999 44444 368999999 9999999995432 347889999999999
Q ss_pred HHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccccccc
Q 004998 131 VEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDL 210 (720)
Q Consensus 131 l~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Df 210 (720)
+.||.|||++|++||||||+||+++.++.++|+|||.+....... .+
T Consensus 132 ~~~l~~lH~~~i~h~dlkp~nili~~~~~~kl~d~g~~~~~~~~~---------------------------------~~ 178 (280)
T cd05049 132 ASGMVYLASQHFVHRDLATRNCLVGYDLVVKIGDFGMSRDVYTTD---------------------------------YY 178 (280)
T ss_pred HHHHHHHhhCCeeccccccceEEEcCCCeEEECCcccceecccCc---------------------------------ce
Confidence 999999999999999999999999999999999998874321110 00
Q ss_pred ccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCc
Q 004998 211 QLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSC 290 (720)
Q Consensus 211 gla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~ 290 (720)
. ......+++.|+|||++.+..++.
T Consensus 179 ~-------------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~ 203 (280)
T cd05049 179 R-------------------------------------------------------VGGHTMLPIRWMPPESIMYRKFTT 203 (280)
T ss_pred e-------------------------------------------------------cCCCCcccceecChhhhccCCcch
Confidence 0 000124578899999999988999
Q ss_pred cccchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 291 ASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 291 ~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
++|||||||++|||++ ||...... .....+..+..++......+...+|+.+||..||.+||++.|+++
T Consensus 204 ~~Di~slG~il~e~~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 276 (280)
T cd05049 204 ESDVWSFGVVLWEIFTYGKQPWYGLSNE-EVIECITQGRLLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHE 276 (280)
T ss_pred hhhHHHHHHHHHHHHhcCCCCCCCCCHH-HHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 9999999999999997 55443332 344444444443332233345569999999999999999999985
No 251
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.96 E-value=6.6e-29 Score=259.05 Aligned_cols=202 Identities=16% Similarity=0.218 Sum_probs=152.6
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
+|..++.+++||||+++++ .+.... .+|+|||| .+++|.+++... ..+++..+..++.||+.||.|||+.||+|
T Consensus 55 ~e~~~l~~~~h~~ii~~~~-~~~~~~---~~~iv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H 129 (267)
T cd06646 55 QEIFMVKECKHCNIVAYFG-SYLSRE---KLWICMEYCGGGSLQDIYHVT-GPLSELQIAYVCRETLQGLAYLHSKGKMH 129 (267)
T ss_pred HHHHHHHhcCCCCeeeeeE-EEEeCC---EEEEEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 6778999999999999999 444432 57999999 889999998544 35899999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+||+++.++.++|+|||.+........
T Consensus 130 ~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~------------------------------------------------ 161 (267)
T cd06646 130 RDIKGANILLTDNGDVKLADFGVAAKITATIA------------------------------------------------ 161 (267)
T ss_pred cCCCHHHEEECCCCCEEECcCccceeeccccc------------------------------------------------
Confidence 99999999999999999999888733211000
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC---CCCCccccchhhhhhh
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG---APVSCASDIYRLGVLL 301 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~---~~~s~~sDIwSLGvll 301 (720)
......|++.|+|||.+.+ ..++.++|||||||++
T Consensus 162 ------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il 199 (267)
T cd06646 162 ------------------------------------------KRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITA 199 (267)
T ss_pred ------------------------------------------ccCccccCccccCHhHcccccCCCCcchhhHHHHHHHH
Confidence 0001357889999999853 3378899999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCC-CCccc--cccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcc
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRHRV-LPPQL--LLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEF 363 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~-~p~~~--~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~hp~ 363 (720)
|||++ ||........ ...+.... .++.+ ...++ ...+|+.+||..+|++|||++++|+|+|
T Consensus 200 ~el~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l~ 267 (267)
T cd06646 200 IELAELQPPMFDLHPMRA-LFLMSKSNFQPPKLKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHLF 267 (267)
T ss_pred HHHHhCCCCccccchhhh-heeeecCCCCCCCCccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCCC
Confidence 99999 4433222211 11111111 22222 12233 4459999999999999999999999987
No 252
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.96 E-value=1.3e-28 Score=259.41 Aligned_cols=205 Identities=22% Similarity=0.230 Sum_probs=157.1
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC----------------CCCCCHHHHHHH
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP----------------KRSVDVYECLHI 126 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~----------------~~~l~~~~~~~i 126 (720)
..+|..++++++||||+++++ ++..+. ..|++||| .+++|.+++... ...+++..+..+
T Consensus 54 ~~~E~~~l~~l~h~niv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 129 (283)
T cd05090 54 FQQEASLMAELHHPNIVCLLG-VVTQEQ---PVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHI 129 (283)
T ss_pred HHHHHHHHhhCCCCCeeeEEE-EEecCC---ceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHH
Confidence 346778999999999999999 444443 57999999 889999998422 124788999999
Q ss_pred HHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccc
Q 004998 127 FRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLR 206 (720)
Q Consensus 127 ~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 206 (720)
+.||+.||.|||++||+||||||+|||++.++.++|+|||++......
T Consensus 130 ~~~i~~al~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~-------------------------------- 177 (283)
T cd05090 130 AIQIAAGMEYLSSHFFVHKDLAARNILIGEQLHVKISDLGLSREIYSA-------------------------------- 177 (283)
T ss_pred HHHHHHHHHHHHhcCeehhccccceEEEcCCCcEEeccccccccccCC--------------------------------
Confidence 999999999999999999999999999999999999999887432111
Q ss_pred ccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC
Q 004998 207 REDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA 286 (720)
Q Consensus 207 l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 286 (720)
++.. ......++..|+|||.+.+.
T Consensus 178 --~~~~------------------------------------------------------~~~~~~~~~~y~aPE~~~~~ 201 (283)
T cd05090 178 --DYYR------------------------------------------------------VQPKSLLPIRWMPPEAIMYG 201 (283)
T ss_pred --ccee------------------------------------------------------cccCCCccceecChHHhccC
Confidence 0000 00012356789999999888
Q ss_pred CCCccccchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004998 287 PVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 287 ~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~h 361 (720)
.++.++|||||||++|||++ ||..... ...+..+.....++......+...+++.+||+.||.+||++.+|+++
T Consensus 202 ~~~~~~Dv~slG~il~el~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~ 279 (283)
T cd05090 202 KFSSDSDIWSFGVVLWEIFSFGLQPYYGFSN-QEVIEMVRKRQLLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTR 279 (283)
T ss_pred CCCchhhhHHHHHHHHHHHcCCCCCCCCCCH-HHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence 89999999999999999997 5655433 24445555444443333333455699999999999999999999863
No 253
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.96 E-value=1e-28 Score=260.07 Aligned_cols=202 Identities=17% Similarity=0.212 Sum_probs=154.2
Q ss_pred hhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccC
Q 004998 69 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 147 (720)
Q Consensus 69 ~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDL 147 (720)
.++...+||||+.+++ .+.... .+|+|||| .|++|.+++...+ .+++..++.++.|++.||.|||+.||+||||
T Consensus 49 ~~~~~~~~~~i~~~~~-~~~~~~---~~~~v~e~~~g~~L~~~l~~~~-~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di 123 (278)
T cd05606 49 SLVSTGDCPFIVCMSY-AFHTPD---KLSFILDLMNGGDLHYHLSQHG-VFSEAEMRFYAAEIILGLEHMHNRFVVYRDL 123 (278)
T ss_pred HHHHhCCCCcEeeeee-eeecCC---EEEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCEEcCCC
Confidence 3455678999999998 454443 57999999 8999999995543 5999999999999999999999999999999
Q ss_pred CCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccccccc
Q 004998 148 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 227 (720)
Q Consensus 148 KP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q 227 (720)
||+||+++.++.++|+|||.+..+...
T Consensus 124 ~p~nili~~~~~~kl~dfg~~~~~~~~----------------------------------------------------- 150 (278)
T cd05606 124 KPANILLDEHGHVRISDLGLACDFSKK----------------------------------------------------- 150 (278)
T ss_pred CHHHEEECCCCCEEEccCcCccccCcc-----------------------------------------------------
Confidence 999999999999999999877322100
Q ss_pred CCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-CCCccccchhhhhhhhhccc
Q 004998 228 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFELFC 306 (720)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGvll~eLlt 306 (720)
......|+..|+|||.+.+. .++.++||||+||++|||++
T Consensus 151 ---------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~ 191 (278)
T cd05606 151 ---------------------------------------KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLR 191 (278)
T ss_pred ---------------------------------------CCcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHh
Confidence 00013578999999999754 58999999999999999999
Q ss_pred ---cCCCCchH-HHHHHHhhcCCCCcccccc-CchHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCCc
Q 004998 307 ---PFSTGEEK-TRTMSSLRHRVLPPQLLLK-FPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEPR 368 (720)
Q Consensus 307 ---pf~~~~~~-~~~~~~l~~~~~p~~~~~~-~p~~~~li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~~ 368 (720)
||...... .......... .++.++.. .+...+++.+||..+|.+|| ++.++++||||....
T Consensus 192 g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~~~~~~~ 262 (278)
T cd05606 192 GHSPFRQHKTKDKHEIDRMTLT-MAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFFRSLD 262 (278)
T ss_pred CCCCCCCCCccchHHHHHHhhc-cCCCCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhCccccCCC
Confidence 66543111 1111111111 12222222 34556999999999999999 999999999998863
No 254
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.96 E-value=1e-28 Score=266.92 Aligned_cols=218 Identities=16% Similarity=0.143 Sum_probs=158.5
Q ss_pred eehhhhcccC-CCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..++.++ +||||+++++...........+|++|||.+++|.+++... ..+++..++.++.||+.||.|||++||+
T Consensus 49 ~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~e~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~giv 127 (332)
T cd07857 49 LRELKLLRHFRGHKNITCLYDMDIVFPGNFNELYLYEELMEADLHQIIRSG-QPLTDAHFQSFIYQILCGLKYIHSANVL 127 (332)
T ss_pred HHHHHHHHHhcCCCChheeeeeeeeccccCCcEEEEEecccCCHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 3577788888 5999999998443333334468999999778999999543 4599999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+||+++.++.++|+|||.+......... .
T Consensus 128 H~dlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~-------------------------------~-------------- 162 (332)
T cd07857 128 HRDLKPGNLLVNADCELKICDFGLARGFSENPGE-------------------------------N-------------- 162 (332)
T ss_pred cCCCCHHHeEEcCCCCEEeCcCCCceeccccccc-------------------------------c--------------
Confidence 9999999999999999999999987443111000 0
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-CCCCccccchhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLF 302 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sDIwSLGvll~ 302 (720)
........||+.|+|||.+.+ ..++.++|||||||++|
T Consensus 163 -----------------------------------------~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~ 201 (332)
T cd07857 163 -----------------------------------------AGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILA 201 (332)
T ss_pred -----------------------------------------cccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHH
Confidence 000011468999999998866 45899999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhh-----------------------c--CCCCc----cccccCchHHHHHHHcCCCCCC
Q 004998 303 ELFC---PFSTGEEKTRTMSSLR-----------------------H--RVLPP----QLLLKFPKEASFCLWLLHPEPS 350 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~-----------------------~--~~~p~----~~~~~~p~~~~li~~~L~~dP~ 350 (720)
+|++ ||............+. . ..... ......+...+|+.+||++||.
T Consensus 202 ~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~ 281 (332)
T cd07857 202 ELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPT 281 (332)
T ss_pred HHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcc
Confidence 9998 4543322111100000 0 00000 1111234556999999999999
Q ss_pred CCCChHHHHcCcccCCCcc
Q 004998 351 GRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 351 ~Rpta~eiL~hp~~~~~~~ 369 (720)
+|||+.+++.||||....+
T Consensus 282 ~R~t~~~ll~~~~~~~~~~ 300 (332)
T cd07857 282 KRISVEEALEHPYLAIWHD 300 (332)
T ss_pred cCCCHHHHhcChhhhhhcC
Confidence 9999999999999986644
No 255
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=99.96 E-value=1.8e-28 Score=258.51 Aligned_cols=209 Identities=17% Similarity=0.143 Sum_probs=154.6
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|++++||||+++++ ++... ....++++||| .|++|.+++.+....+++..+..++.||+.||+|||++|
T Consensus 52 ~~~~e~~~l~~l~h~~i~~~~~-~~~~~-~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~g 129 (284)
T cd05079 52 DLKKEIEILRNLYHENIVKYKG-ICTED-GGNGIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQ 129 (284)
T ss_pred HHHHHHHHHHhCCCCCeeeeee-EEecC-CCCceEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 4457788999999999999999 44433 12357999999 899999999655456899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++.++|+|||.+........ .
T Consensus 130 i~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~---------------------------------~----------- 165 (284)
T cd05079 130 YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKE---------------------------------Y----------- 165 (284)
T ss_pred eeecccchheEEEcCCCCEEECCCccccccccCcc---------------------------------c-----------
Confidence 99999999999999999999999888743211100 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
. . ......++..|+|||.+.+..++.++|||||||++
T Consensus 166 -~----------------------~--------------------~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il 202 (284)
T cd05079 166 -Y----------------------T--------------------VKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTL 202 (284)
T ss_pred -e----------------------e--------------------ecCCCCCCccccCHHHhccCCCCccccchhhhhhh
Confidence 0 0 00012457789999999888899999999999999
Q ss_pred hhccccCCCC-----------------chHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 302 FELFCPFSTG-----------------EEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLltpf~~~-----------------~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||+++..+. .........+......+......+...+|+.+||+.+|.+|||+.++++
T Consensus 203 ~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 278 (284)
T cd05079 203 YELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIE 278 (284)
T ss_pred hhhhcCCCCCccccchhhhhcccccccccHHHHHHHHHcCccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 9999821110 0011111222222222222233445669999999999999999999986
No 256
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=99.96 E-value=1.8e-28 Score=254.63 Aligned_cols=210 Identities=20% Similarity=0.245 Sum_probs=159.8
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
....|..++.+++||||+++++ ++... ..+++++|| .+++|.+++.+. ..+++..++.++.||+.||.|||+.|
T Consensus 45 ~~~~e~~~~~~l~~~~i~~~~~-~~~~~---~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~ 119 (264)
T cd06626 45 EIADEMKVLELLKHPNLVKYYG-VEVHR---EKVYIFMEYCSGGTLEELLEHG-RILDEHVIRVYTLQLLEGLAYLHSHG 119 (264)
T ss_pred HHHHHHHHHHhCCCCChhheee-eEecC---CEEEEEEecCCCCcHHHHHhhc-CCCChHHHHHHHHHHHHHHHHHHHCC
Confidence 3346777999999999999999 44333 368999999 899999999654 34899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+|+||+|+||+++.++.++|+|||.+.......... ..+
T Consensus 120 i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~-----------------------------~~~----------- 159 (264)
T cd06626 120 IVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTM-----------------------------GEE----------- 159 (264)
T ss_pred cccCCCCHHHEEECCCCCEEEcccccccccCCCCCcc-----------------------------ccc-----------
Confidence 9999999999999999999999998874432210000 000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC---CCccccchhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP---VSCASDIYRLG 298 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~---~s~~sDIwSLG 298 (720)
.....+++.|+|||.+.+.. ++.++||||||
T Consensus 160 ----------------------------------------------~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G 193 (264)
T cd06626 160 ----------------------------------------------VQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLG 193 (264)
T ss_pred ----------------------------------------------ccCCcCCcCccChhhccCCCCCCCCcccchHHHH
Confidence 00135688999999998766 89999999999
Q ss_pred hhhhhccc---cCCCCchHHHHHHHhhcCCCCccccc---cCchHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004998 299 VLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL---KFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~---~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
|++|+|++ ||............+.... ++.++. ..+...+|+.+||+.+|.+|||+.+++.|||+
T Consensus 194 ~il~~l~~g~~pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~ 264 (264)
T cd06626 194 CVVLEMATGKRPWSELDNEFQIMFHVGAGH-KPPIPDSLQLSPEGKDFLDRCLESDPKKRPTASELLQHPFV 264 (264)
T ss_pred HHHHHHHhCCCCccCCcchHHHHHHHhcCC-CCCCCcccccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 99999999 6654433322222232222 222222 13555699999999999999999999999996
No 257
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=99.96 E-value=1.5e-28 Score=255.45 Aligned_cols=204 Identities=17% Similarity=0.182 Sum_probs=152.0
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|..+++.++||||+++++ ++.... ...+++||| .+++|.+++.+....+++..+..++.||+.||.|||+.||+|
T Consensus 45 ~e~~~l~~l~h~~iv~~~~-~~~~~~--~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H 121 (262)
T cd05058 45 KEGIIMKDFSHPNVLSLLG-ICLPSE--GSPLVVLPYMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVH 121 (262)
T ss_pred HHHHHHccCCCCCcceEEE-EeecCC--CCcEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 5677899999999999999 443222 246899999 999999999665555788889999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+|||++.++.+||+|||+++...... .+.+.
T Consensus 122 ~dlk~~nili~~~~~~kl~dfg~~~~~~~~~---------------------------------~~~~~----------- 157 (262)
T cd05058 122 RDLAARNCMLDESFTVKVADFGLARDIYDKE---------------------------------YYSVH----------- 157 (262)
T ss_pred cccCcceEEEcCCCcEEECCccccccccCCc---------------------------------ceeec-----------
Confidence 9999999999999999999998874321110 00000
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhc
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 304 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eL 304 (720)
......+++.|+|||.+.+..++.++|||||||++|||
T Consensus 158 ------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el 195 (262)
T cd05058 158 ------------------------------------------NHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL 195 (262)
T ss_pred ------------------------------------------ccccCcCCccccChhHhccCccchHHHHHHHHHHHHHH
Confidence 00012356789999999888899999999999999999
Q ss_pred cc----cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 305 FC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 305 lt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
++ ||...... .....+..+..++. ....| ...+++.+||+++|++||++.++++
T Consensus 196 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~ 254 (262)
T cd05058 196 MTRGAPPYPDVDSF-DITVYLLQGRRLLQ-PEYCPDPLYEVMLSCWHPKPEMRPTFSELVS 254 (262)
T ss_pred HcCCCCCCCCCCHH-HHHHHHhcCCCCCC-CCcCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 98 33333322 23333333322222 22233 4559999999999999999999986
No 258
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=99.96 E-value=4.9e-30 Score=256.03 Aligned_cols=207 Identities=14% Similarity=0.208 Sum_probs=166.2
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|+-|+.+.+.|+||++|+.+|... .+|+|||| +.|++.+.++....++++.++..+++..+.||.|||...-||
T Consensus 77 KEISIMQQC~S~yVVKYYGSYFK~s----DLWIVMEYCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIH 152 (502)
T KOG0574|consen 77 KEISIMQQCKSKYVVKYYGSYFKHS----DLWIVMEYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIH 152 (502)
T ss_pred HHHHHHHHcCCchhhhhhhhhccCC----ceEeehhhcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 6778999999999999999666544 47999999 789999999877888999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
||||..|||++-+|+.||+|||.+-.. +|- +
T Consensus 153 RDIKAGNILLNT~G~AKLADFGVAGQL------------------------------------TDT-M------------ 183 (502)
T KOG0574|consen 153 RDIKAGNILLNTDGIAKLADFGVAGQL------------------------------------TDT-M------------ 183 (502)
T ss_pred hhcccccEEEcccchhhhhhccccchh------------------------------------hhh-H------------
Confidence 999999999999999999999988221 110 0
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhc
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 304 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eL 304 (720)
.+....+|||.|||||++..-.|.+.+||||||++..||
T Consensus 184 -----------------------------------------AKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEM 222 (502)
T KOG0574|consen 184 -----------------------------------------AKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEM 222 (502)
T ss_pred -----------------------------------------HhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhh
Confidence 011236899999999999999999999999999999999
Q ss_pred cc---cCCCCchHHHHHHHhhcCCCCccc--cccCchHH-HHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004998 305 FC---PFSTGEEKTRTMSSLRHRVLPPQL--LLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 305 lt---pf~~~~~~~~~~~~l~~~~~p~~~--~~~~p~~~-~li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
.. ||....+. +++-.+-. ..||.+ +..|+... ||++.||.+.|++|.||.++++|||++...
T Consensus 223 AEG~PPYsDIHPM-RAIFMIPT-~PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H~FiknA~ 290 (502)
T KOG0574|consen 223 AEGRPPYSDIHPM-RAIFMIPT-KPPPTFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEHTFIKNAP 290 (502)
T ss_pred hcCCCCccccccc-ceeEeccC-CCCCCCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhhhhhcCCC
Confidence 98 44333222 11111111 223333 23555544 999999999999999999999999999863
No 259
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=99.96 E-value=1.5e-28 Score=260.13 Aligned_cols=205 Identities=17% Similarity=0.182 Sum_probs=156.5
Q ss_pred eeehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC---------------CCCCCCHHHHHHH
Q 004998 64 KHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK---------------PKRSVDVYECLHI 126 (720)
Q Consensus 64 ~~~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~---------------~~~~l~~~~~~~i 126 (720)
..+|..++.++ +||||+++++ ++.... .++++||| .+++|.+++.. ....+++..++.+
T Consensus 62 ~~~E~~~l~~l~~h~~i~~~~~-~~~~~~---~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i 137 (293)
T cd05053 62 LVSEMEMMKMIGKHKNIINLLG-VCTQEG---PLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSF 137 (293)
T ss_pred HHHHHHHHHhhcCCCCeeeEEE-EEcCCC---CeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHH
Confidence 33677788888 8999999999 444432 57999999 89999999942 2345899999999
Q ss_pred HHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccc
Q 004998 127 FRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLR 206 (720)
Q Consensus 127 ~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 206 (720)
+.||+.||+|||+.||+||||||+||+++.++.++|+|||.+.........
T Consensus 138 ~~qi~~al~~LH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~----------------------------- 188 (293)
T cd05053 138 AYQVARGMEFLASKKCIHRDLAARNVLVTEDHVMKIADFGLARDIHHIDYY----------------------------- 188 (293)
T ss_pred HHHHHHHHHHHHHCCccccccceeeEEEcCCCeEEeCccccccccccccce-----------------------------
Confidence 999999999999999999999999999999999999999887432111000
Q ss_pred ccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC
Q 004998 207 REDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA 286 (720)
Q Consensus 207 l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 286 (720)
. ......++..|+|||++.+.
T Consensus 189 ----------------~-------------------------------------------~~~~~~~~~~y~aPE~~~~~ 209 (293)
T cd05053 189 ----------------R-------------------------------------------KTTNGRLPVKWMAPEALFDR 209 (293)
T ss_pred ----------------e-------------------------------------------ccCCCCCCccccCHHHhccC
Confidence 0 00001235679999999888
Q ss_pred CCCccccchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004998 287 PVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 287 ~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~h 361 (720)
.++.++|||||||++|||++ ||..... ......+.....++......+...+|+.+||.++|.+|||+.|++++
T Consensus 210 ~~~~~~Di~slG~il~el~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~ 287 (293)
T cd05053 210 VYTHQSDVWSFGVLLWEIFTLGGSPYPGIPV-EELFKLLKEGYRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVED 287 (293)
T ss_pred CcCcccceeehhhHHHHHhcCCCCCCCCCCH-HHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence 89999999999999999987 5554433 23444444444333333344556699999999999999999999873
No 260
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=99.96 E-value=1.2e-28 Score=258.88 Aligned_cols=204 Identities=14% Similarity=0.107 Sum_probs=153.7
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC---------CCCCHHHHHHHHHHHHHHH
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---------RSVDVYECLHIFRQIVEIV 134 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~---------~~l~~~~~~~i~~QIl~aL 134 (720)
.+|..++..++||||+++++ ++.... ..+++||| .+++|.+++.+.. ..++...+..++.||+.||
T Consensus 57 ~~e~~~l~~l~~~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 132 (277)
T cd05062 57 LNEASVMKEFNCHHVVRLLG-VVSQGQ---PTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGM 132 (277)
T ss_pred HHHHHHHHhCCCCCeeeEEE-EEcCCC---CeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHH
Confidence 36778899999999999999 554333 57999999 9999999994321 2357788999999999999
Q ss_pred HHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccccccccccc
Q 004998 135 YAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVT 214 (720)
Q Consensus 135 ~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~ 214 (720)
.|||+.|++|+||||+||+++.++.++++|||++.........
T Consensus 133 ~~lH~~~~vH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~------------------------------------- 175 (277)
T cd05062 133 AYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY------------------------------------- 175 (277)
T ss_pred HHHHHCCcccCCcchheEEEcCCCCEEECCCCCccccCCccee-------------------------------------
Confidence 9999999999999999999999999999998887432111000
Q ss_pred CCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccc
Q 004998 215 APTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDI 294 (720)
Q Consensus 215 ~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDI 294 (720)
.......+++.|+|||++.+..++.++||
T Consensus 176 ---------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di 204 (277)
T cd05062 176 ---------------------------------------------------RKGGKGLLPVRWMSPESLKDGVFTTYSDV 204 (277)
T ss_pred ---------------------------------------------------ecCCCCccCHhhcChhHhhcCCcCchhHH
Confidence 00001245778999999998889999999
Q ss_pred hhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004998 295 YRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 295 wSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~h 361 (720)
|||||++|||++ ||...... .....+.....++......+...+|+.+||+.+|++|||+.|++++
T Consensus 205 ~slG~~l~el~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 274 (277)
T cd05062 205 WSFGVVLWEIATLAEQPYQGMSNE-QVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 274 (277)
T ss_pred HHHHHHHHHHHcCCCCCCCCCCHH-HHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 999999999997 55544332 3333333333332222223345699999999999999999999863
No 261
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=99.96 E-value=1e-28 Score=255.54 Aligned_cols=205 Identities=18% Similarity=0.232 Sum_probs=158.3
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
.+|..++++++||||+++++ .+.... ..|+++|| .+++|.+++.. ....+++..++.++.||+.||.|||+.||
T Consensus 47 ~~E~~~l~~~~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i 122 (257)
T cd08225 47 KKEVILLAKMKHPNIVTFFA-SFQENG---RLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKI 122 (257)
T ss_pred HHHHHHHHhCCCCChhhhhh-eeccCC---eEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 36778999999999999999 454443 67999999 89999999944 33358999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCc-eEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 143 VVHNVRPSCFVMSSFNH-VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~-vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
+|+||||+||+++.++. ++++|||.+...+.. .+.
T Consensus 123 ~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~---------------------------------~~~----------- 158 (257)
T cd08225 123 LHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDS---------------------------------MEL----------- 158 (257)
T ss_pred ccccCCHHHEEEcCCCCeEEecccccchhccCC---------------------------------ccc-----------
Confidence 99999999999997754 699888876332111 000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
.....|++.|+|||.+.+..++.++|+|||||++
T Consensus 159 ----------------------------------------------~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il 192 (257)
T cd08225 159 ----------------------------------------------AYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVL 192 (257)
T ss_pred ----------------------------------------------ccccCCCccccCHHHHcCCCCCchhhHHHHHHHH
Confidence 0013578899999999888899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
|||++ ||......... ..+.....++..........+++.+||..+|++|||+.++++||||
T Consensus 193 ~~l~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~~~~ 257 (257)
T cd08225 193 YELCTLKHPFEGNNLHQLV-LKICQGYFAPISPNFSRDLRSLISQLFKVSPRDRPSITSILKRPFL 257 (257)
T ss_pred HHHHhCCCCCCCccHHHHH-HHHhcccCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHhhCCCC
Confidence 99998 55544333222 2333333333322233455699999999999999999999999997
No 262
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.96 E-value=8.8e-29 Score=261.22 Aligned_cols=209 Identities=17% Similarity=0.147 Sum_probs=154.7
Q ss_pred eeehhhhcccCC-CCCceecccceeecCCCCCcEEEEEecCCCCHHHHHh----CCCCCCCHHHHHHHHHHHHHHHHHHH
Q 004998 64 KHSDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLD----KPKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 64 ~~~e~~~Ls~l~-HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~----~~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
...|..++.++. ||||+++++. +..+. ..+++|||.+++|.++.. .....+++..+..++.|++.||+|||
T Consensus 49 ~~~e~~~l~~~~~~~~iv~~~~~-~~~~~---~~~~~~e~~~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh 124 (288)
T cd06616 49 LLMDLDVVMRSSDCPYIVKFYGA-LFREG---DCWICMELMDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLK 124 (288)
T ss_pred HHHHHHHHHHhcCCCCEeeeeeE-EecCC---cEEEEEecccCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHh
Confidence 346677788886 9999999994 43332 578999997777766441 23355999999999999999999999
Q ss_pred Hc-CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCC
Q 004998 139 SQ-GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 139 s~-gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~ 217 (720)
+. ||+||||||+||+++.++.++|+|||++.......
T Consensus 125 ~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~------------------------------------------ 162 (288)
T cd06616 125 EELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSI------------------------------------------ 162 (288)
T ss_pred hcCCeeccCCCHHHEEEccCCcEEEeecchhHHhccCC------------------------------------------
Confidence 74 99999999999999999999999988773221100
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC---CCCccccc
Q 004998 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA---PVSCASDI 294 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~---~~s~~sDI 294 (720)
......|++.|+|||++.+. .++.++||
T Consensus 163 -------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di 193 (288)
T cd06616 163 -------------------------------------------------AKTRDAGCRPYMAPERIDPSARDGYDVRSDV 193 (288)
T ss_pred -------------------------------------------------ccccccCccCccCHHHhccccccCCcchhhh
Confidence 00012568889999999776 58999999
Q ss_pred hhhhhhhhhccc---cCCCCchHHHHHHHhhcCCCCcc---cc-ccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 295 YRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQ---LL-LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 295 wSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~---~~-~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|||||++|||++ ||.........+..+.....|.. .. ...+...+|+.+||+++|++|||+.+|+.||||...
T Consensus 194 ~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~~~~~~~ 273 (288)
T cd06616 194 WSLGITLYEVATGKFPYPKWNSVFDQLTQVVKGDPPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEHPFIKDY 273 (288)
T ss_pred hHHHHHHHHHHhCCCCchhcchHHHHHhhhcCCCCCcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhch
Confidence 999999999998 55544322222222222222111 11 122345599999999999999999999999999875
No 263
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=8.9e-30 Score=256.69 Aligned_cols=221 Identities=17% Similarity=0.272 Sum_probs=172.2
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|..+|...+||.+..|-. .|+..+ .+|+|||| .||.|.-.|.+ .+.+++..++.+-..|+.||.|||+++||.
T Consensus 217 TE~RVL~~~~HPFLt~LKY-sFQt~d---rlCFVMeyanGGeLf~HLsr-er~FsE~RtRFYGaEIvsAL~YLHs~~ivY 291 (516)
T KOG0690|consen 217 TENRVLQNCRHPFLTSLKY-SFQTQD---RLCFVMEYANGGELFFHLSR-ERVFSEDRTRFYGAEIVSALGYLHSRNIVY 291 (516)
T ss_pred hHHHHHHhccCcHHHHhhh-hhccCc---eEEEEEEEccCceEeeehhh-hhcccchhhhhhhHHHHHHhhhhhhCCeee
Confidence 5566788999999988876 455543 68999999 99999988843 456999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
||||.+|+|++.+|++||.|||+|+.--.. ++
T Consensus 292 RDlKLENLlLDkDGHIKitDFGLCKE~I~~---------------------------------g~--------------- 323 (516)
T KOG0690|consen 292 RDLKLENLLLDKDGHIKITDFGLCKEEIKY---------------------------------GD--------------- 323 (516)
T ss_pred eechhhhheeccCCceEeeecccchhcccc---------------------------------cc---------------
Confidence 999999999999999999999999532111 00
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhc
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 304 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eL 304 (720)
+....+|||.|+|||++....|+.++|+|.+||++|||
T Consensus 324 ------------------------------------------t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEM 361 (516)
T KOG0690|consen 324 ------------------------------------------TTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEM 361 (516)
T ss_pred ------------------------------------------eeccccCChhhcCchhhccccccceeehhhhhHHHHHH
Confidence 01126899999999999999999999999999999999
Q ss_pred cc---cCCCCchHHHHHHHhh-c-CCCCccccccCchHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCC-ccchHH
Q 004998 305 FC---PFSTGEEKTRTMSSLR-H-RVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP-RDSMEE 373 (720)
Q Consensus 305 lt---pf~~~~~~~~~~~~l~-~-~~~p~~~~~~~p~~~~li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~-~~~l~e 373 (720)
+| ||...+.. ..+..|. . -.+|..+ .|+...|+..+|.+||.+|. .+.||.+|+||... +...-.
T Consensus 362 mCGRLPFyn~dh~-kLFeLIl~ed~kFPr~l---s~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~FF~~v~W~~~~~ 437 (516)
T KOG0690|consen 362 MCGRLPFYNKDHE-KLFELILMEDLKFPRTL---SPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHRFFASVDWEATYR 437 (516)
T ss_pred HhccCcccccchh-HHHHHHHhhhccCCccC---CHHHHHHHHHHhhcChHhhcCCCchhHHHHHhhhhhccCCHHHHHH
Confidence 99 88765443 2222222 1 2233332 35556999999999999995 58999999999987 444445
Q ss_pred HHHHHHHhhhhh
Q 004998 374 REAAIELREQID 385 (720)
Q Consensus 374 ~~~~~~~~e~~~ 385 (720)
++..+++.++..
T Consensus 438 Kki~PPfKPqVt 449 (516)
T KOG0690|consen 438 KKIEPPFKPQVT 449 (516)
T ss_pred hccCCCCCCCcc
Confidence 555555555443
No 264
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=99.96 E-value=2e-28 Score=253.20 Aligned_cols=204 Identities=20% Similarity=0.248 Sum_probs=158.7
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC--------CCCCCHHHHHHHHHHHHHHHH
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP--------KRSVDVYECLHIFRQIVEIVY 135 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~--------~~~l~~~~~~~i~~QIl~aL~ 135 (720)
.+|..++..++||||+++++ ++... ..++++||| .+++|.+++... ...+++..++.++.||+.||.
T Consensus 44 ~~e~~~l~~~~~~~i~~~~~-~~~~~---~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~ 119 (262)
T cd00192 44 LKEARVMKKLGHPNVVRLLG-VCTEE---EPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGME 119 (262)
T ss_pred HHHHHHHhhcCCCChheeee-eecCC---CceEEEEEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHH
Confidence 36777899999999999999 55443 368999999 799999999654 356999999999999999999
Q ss_pred HHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccC
Q 004998 136 AAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTA 215 (720)
Q Consensus 136 yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~ 215 (720)
|||++||+|+||||+||+++.++.++|+|||.+....... .+
T Consensus 120 ~lH~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~---------------------------------~~----- 161 (262)
T cd00192 120 YLASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDD---------------------------------YY----- 161 (262)
T ss_pred HHHcCCcccCccCcceEEECCCCcEEEccccccccccccc---------------------------------cc-----
Confidence 9999999999999999999999999999998874432110 00
Q ss_pred CCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccch
Q 004998 216 PTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIY 295 (720)
Q Consensus 216 ~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIw 295 (720)
.......+++.|+|||.+.+..++.++|||
T Consensus 162 --------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~ 191 (262)
T cd00192 162 --------------------------------------------------RKKTGGKLPIRWMAPESLKDGIFTSKSDVW 191 (262)
T ss_pred --------------------------------------------------ccccCCCcCccccCHHHhccCCcchhhccH
Confidence 000013468889999999888899999999
Q ss_pred hhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004998 296 RLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 296 SLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~h 361 (720)
||||++|||++ ||..... ......+......+......+...+++.+||..+|.+|||+.+++++
T Consensus 192 slG~il~~l~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 260 (262)
T cd00192 192 SFGVLLWEIFTLGATPYPGLSN-EEVLEYLRKGYRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVER 260 (262)
T ss_pred HHHHHHHHHHhcCCCCCCCCCH-HHHHHHHHcCCCCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 99999999997 5554432 23444444333332222334556699999999999999999999864
No 265
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.96 E-value=8.7e-29 Score=266.76 Aligned_cols=218 Identities=17% Similarity=0.198 Sum_probs=161.9
Q ss_pred eeehhhhcccCCCCCceecccceeecC-CCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENE-AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~-~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..++..++||||+++++.+.... .....+|++|||.+++|.+++.... .+++..++.++.||+.||.|||++||
T Consensus 46 ~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~-~l~~~~~~~i~~~l~~~l~~LH~~gi 124 (330)
T cd07834 46 ILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVYIVTELMETDLHKVIKSPQ-PLTDDHIQYFLYQILRGLKYLHSANV 124 (330)
T ss_pred HHHHHHHHHhcCCcchhhhhhhhcccCcccccceEEEecchhhhHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 336777899999999999999443332 2334689999996679999995544 69999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.++|+|||.+.........
T Consensus 125 ~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~~~--------------------------------------------- 159 (330)
T cd07834 125 IHRDLKPSNILVNSNCDLKICDFGLARGVDPDEDE--------------------------------------------- 159 (330)
T ss_pred ecCCCCHHHEEEcCCCCEEEcccCceEeecccccc---------------------------------------------
Confidence 99999999999999999999999887432111000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-CCCccccchhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLL 301 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGvll 301 (720)
+.......++++|+|||.+.+. .++.++|||||||++
T Consensus 160 ------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il 197 (330)
T cd07834 160 ------------------------------------------KGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIF 197 (330)
T ss_pred ------------------------------------------cccccccccccCcCCceeeecccCCCcchhHHHHHHHH
Confidence 0000113578999999999888 689999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhc--CCCCcc----------------------------ccccCchHHHHHHHcCCCC
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRH--RVLPPQ----------------------------LLLKFPKEASFCLWLLHPE 348 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~--~~~p~~----------------------------~~~~~p~~~~li~~~L~~d 348 (720)
|+|++ ||....... .+..+.. +..++. .....+...+|+.+||+++
T Consensus 198 ~~l~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~ 276 (330)
T cd07834 198 AELLTRKPLFPGRDYID-QLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFD 276 (330)
T ss_pred HHHHcCCCCcCCCCHHH-HHHHHHHhcCCCChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCC
Confidence 99999 554433221 1111111 000000 0112234459999999999
Q ss_pred CCCCCChHHHHcCcccCCCccc
Q 004998 349 PSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 349 P~~Rpta~eiL~hp~~~~~~~~ 370 (720)
|.+||++.++++||||......
T Consensus 277 P~~Rpt~~~ll~~~~~~~~~~~ 298 (330)
T cd07834 277 PKKRITADEALAHPYLAQLHDP 298 (330)
T ss_pred hhhCCCHHHHHhCccHHhhccc
Confidence 9999999999999999987553
No 266
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.96 E-value=2.5e-28 Score=263.99 Aligned_cols=225 Identities=17% Similarity=0.178 Sum_probs=161.7
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..+|..++.+++||||+++++ ++..+. .++++|||..++|.+++.... .+++..+..++.||+.||.|||+.||+
T Consensus 67 ~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~l~~~l~~~~-~~~~~~~~~~~~ql~~aL~~LH~~~i~ 141 (335)
T PTZ00024 67 TLRELKIMNEIKHENIMGLVD-VYVEGD---FINLVMDIMASDLKKVVDRKI-RLTESQVKCILLQILNGLNVLHKWYFM 141 (335)
T ss_pred HHHHHHHHHhCCCcceeeeeE-EEecCC---cEEEEEeccccCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 346788999999999999999 444443 679999996679999995543 489999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
|+||||+||+++.++.++|+|||.+...+.......... +... .
T Consensus 142 H~dl~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~--------------------------~~~~----~------ 185 (335)
T PTZ00024 142 HRDLSPANIFINSKGICKIADFGLARRYGYPPYSDTLSK--------------------------DETM----Q------ 185 (335)
T ss_pred cccccHHHeEECCCCCEEECCccceeecccccccccccc--------------------------cccc----c------
Confidence 999999999999999999999998865433211100000 0000 0
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC-CCccccchhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLF 302 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGvll~ 302 (720)
.........+++.|+|||.+.+.. ++.++|||||||++|
T Consensus 186 ----------------------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~ 225 (335)
T PTZ00024 186 ----------------------------------------RREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFA 225 (335)
T ss_pred ----------------------------------------ccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHH
Confidence 000001135688999999997654 799999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhc---CCC--------------------Cccc----cccCchHHHHHHHcCCCCCCCC
Q 004998 303 ELFC---PFSTGEEKTRTMSSLRH---RVL--------------------PPQL----LLKFPKEASFCLWLLHPEPSGR 352 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~---~~~--------------------p~~~----~~~~p~~~~li~~~L~~dP~~R 352 (720)
||++ ||....... .+..+.. ... ++.+ ........+|+.+||.++|++|
T Consensus 226 el~tg~~p~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R 304 (335)
T PTZ00024 226 ELLTGKPLFPGENEID-QLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLER 304 (335)
T ss_pred HHHhCCCCCCCCCHHH-HHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhc
Confidence 9999 555443322 1111111 000 0000 1112334599999999999999
Q ss_pred CChHHHHcCcccCCCccc
Q 004998 353 PKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 353 pta~eiL~hp~~~~~~~~ 370 (720)
|+++|+|.||||+.....
T Consensus 305 ~s~~~~l~~~~~~~~~~~ 322 (335)
T PTZ00024 305 ISAKEALKHEYFKSDPLP 322 (335)
T ss_pred cCHHHHhcCcccCCCCCC
Confidence 999999999999976443
No 267
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.96 E-value=2.4e-29 Score=271.54 Aligned_cols=248 Identities=14% Similarity=0.168 Sum_probs=167.6
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|..||+..+.++||+||. .|++.+ .+|+||+| .||++..+|.+.+- |+|..++.|+..+.+|+++.|..|+||
T Consensus 678 AERDILAEADn~WVVrLyy-SFQDkd---nLYFVMdYIPGGDmMSLLIrmgI-FeE~LARFYIAEltcAiesVHkmGFIH 752 (1034)
T KOG0608|consen 678 AERDILAEADNEWVVRLYY-SFQDKD---NLYFVMDYIPGGDMMSLLIRMGI-FEEDLARFYIAELTCAIESVHKMGFIH 752 (1034)
T ss_pred hhhhhHhhcCCcceEEEEE-EeccCC---ceEEEEeccCCccHHHHHHHhcc-CHHHHHHHHHHHHHHHHHHHHhcccee
Confidence 5556999999999999999 777776 46999999 99999999966554 999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+||||+.+|++||.|||+|..+.-..- ...++ .+|-- +..+
T Consensus 753 RDiKPDNILIDrdGHIKLTDFGLCTGfRWTHd---------------------skYYq----~gdH~--------RqDS- 798 (1034)
T KOG0608|consen 753 RDIKPDNILIDRDGHIKLTDFGLCTGFRWTHD---------------------SKYYQ----EGDHH--------RQDS- 798 (1034)
T ss_pred cccCccceEEccCCceeeeeccccccceeccc---------------------ccccc----CCCcc--------cccc-
Confidence 99999999999999999999999965421100 00000 00000 0000
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcc--cCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEK--KQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~--~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
+ .-...+.|.+-+...-+.+ .+..-......+||+.|+|||++....|+..+|+||.|||||
T Consensus 799 -m---------------ep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~ 862 (1034)
T KOG0608|consen 799 -M---------------EPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILY 862 (1034)
T ss_pred -C---------------CCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHH
Confidence 0 0000111111110000000 112222233479999999999999999999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhc-CCCCccccccCchHH-HHHHHcCCCCCCCCC---ChHHHHcCcccCCCcc
Q 004998 303 ELFC---PFSTGEEKTRTMSSLRH-RVLPPQLLLKFPKEA-SFCLWLLHPEPSGRP---KMGELLQSEFLNEPRD 369 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~-~~~p~~~~~~~p~~~-~li~~~L~~dP~~Rp---ta~eiL~hp~~~~~~~ 369 (720)
||+. ||.........+..+.= ..+.-....+.++++ +||.++. .++++|. .++++..||||+...-
T Consensus 863 em~~g~~pf~~~tp~~tq~kv~nw~~~l~~~~~~~ls~e~~~li~kLc-~sad~RLGkng~d~vKaHpfFkgIDf 936 (1034)
T KOG0608|consen 863 EMLVGQPPFLADTPGETQYKVINWRNFLHIPYQGNLSKEALDLIQKLC-CSADSRLGKNGADQVKAHPFFKGIDF 936 (1034)
T ss_pred HHhhCCCCccCCCCCcceeeeeehhhccccccccccCHHHHHHHHHHh-cChhhhhcccchhhhhcCccccccch
Confidence 9998 67655443222222110 111111223444444 7877755 5778886 5778999999999844
No 268
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=99.96 E-value=1.8e-28 Score=254.88 Aligned_cols=208 Identities=15% Similarity=0.227 Sum_probs=158.3
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC--CCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP--KRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~--~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
.+|..+|+.++||||+++++ .+..+. .+|++||+ .|++|.+++... ...+++..++.++.||+.||.|||++|
T Consensus 47 ~~e~~~l~~l~~~~i~~~~~-~~~~~~---~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~ 122 (267)
T cd06610 47 RKEVQAMSQCNHPNVVKYYT-SFVVGD---ELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNG 122 (267)
T ss_pred HHHHHHHHhcCCCCEEEEEE-EEeeCC---EEEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 46777899999999999999 444433 67999999 899999999542 245899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||++++++.++|+|||.+.........
T Consensus 123 i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~-------------------------------------------- 158 (267)
T cd06610 123 QIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDR-------------------------------------------- 158 (267)
T ss_pred eecCCCCHHhEEEcCCCCEEEcccchHHHhccCccc--------------------------------------------
Confidence 999999999999999999999999887432111000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-CCCccccchhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVL 300 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGvl 300 (720)
. . .......|+..|+|||.+... .++.++|+|||||+
T Consensus 159 -----------------------~----------------~---~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i 196 (267)
T cd06610 159 -----------------------T----------------R---KVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGIT 196 (267)
T ss_pred -----------------------c----------------c---cccccccCChhhcChHHHccccCcCcccchHhHhHH
Confidence 0 0 000114678999999998777 68999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCcccc------ccCchHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004998 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLL------LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~------~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
+|+|++ ||............+.. . ++.+. ...+...+|+.+||..||++||++.++++||||
T Consensus 197 ~~~l~~g~~p~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~p~~ 267 (267)
T cd06610 197 AIELATGAAPYSKYPPMKVLMLTLQN-D-PPSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKHKFF 267 (267)
T ss_pred HHHHHhCCCCccccChhhhHHHHhcC-C-CCCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhhCCCC
Confidence 999999 56544333222232222 1 11111 122344699999999999999999999999997
No 269
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.96 E-value=2.2e-28 Score=251.91 Aligned_cols=210 Identities=21% Similarity=0.235 Sum_probs=162.8
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..++++++||||+++++ .+.... ...+++++|| .+++|.+++.+.. .+++..++.++.|++.||.|||+.|+
T Consensus 46 ~~~e~~~l~~l~~~~i~~~~~-~~~~~~-~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~~~~ 122 (260)
T cd06606 46 LEREIRILSSLQHPNIVRYYG-SERDEE-KNTLNIFLEYVSGGSLSSLLKKFG-KLPEPVIRKYTRQILEGLAYLHSNGI 122 (260)
T ss_pred HHHHHHHHHHcCCCCEeeEEE-EEecCC-CCeEEEEEEecCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 346777899999999999999 443331 2368999999 7999999996544 69999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+|+||+|+||+++.++.++|+|||.+........ .
T Consensus 123 ~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~---------------------------------~------------ 157 (260)
T cd06606 123 VHRDIKGANILVDSDGVVKLADFGCAKRLGDIET---------------------------------G------------ 157 (260)
T ss_pred cccCCCHHHEEEcCCCCEEEcccccEEecccccc---------------------------------c------------
Confidence 9999999999999999999999988743221100 0
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
.......++..|+|||.+.+..++.++||||||+++|
T Consensus 158 -------------------------------------------~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~ 194 (260)
T cd06606 158 -------------------------------------------EGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVI 194 (260)
T ss_pred -------------------------------------------ccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHH
Confidence 0000135688999999998888999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004998 303 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
+|++ ||............+......+..+...+ ...+|+.+||..+|.+||++.++++||||
T Consensus 195 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 260 (260)
T cd06606 195 EMATGKPPWSELGNPMAALYKIGSSGEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQHPFL 260 (260)
T ss_pred HHHhCCCCCCCCCchHHHHHhccccCCCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhhCCCC
Confidence 9999 66555433333444443223333333333 44599999999999999999999999997
No 270
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.96 E-value=1.3e-28 Score=259.65 Aligned_cols=207 Identities=18% Similarity=0.189 Sum_probs=158.7
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH-cC
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-QG 141 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs-~g 141 (720)
..+|..++..++||||+++++ .+... ..+|+|||| .+++|.+++.+.+ .+++..++.++.||+.||.|||+ .|
T Consensus 50 ~~~E~~~l~~l~h~~i~~~~~-~~~~~---~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~i~~~l~~LH~~~~ 124 (284)
T cd06620 50 ILRELQIMHECRSPYIVSFYG-AFLNE---NNICMCMEFMDCGSLDRIYKKGG-PIPVEILGKIAVAVVEGLTYLYNVHR 124 (284)
T ss_pred HHHHHHHHHHcCCCCcceEee-eEecC---CEEEEEEecCCCCCHHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHHHhcC
Confidence 346777899999999999999 44444 368999999 8999999985543 48999999999999999999997 69
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
++||||||+||+++.++.++|+|||++......
T Consensus 125 i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~----------------------------------------------- 157 (284)
T cd06620 125 IMHRDIKPSNILVNSRGQIKLCDFGVSGELINS----------------------------------------------- 157 (284)
T ss_pred eeccCCCHHHEEECCCCcEEEccCCcccchhhh-----------------------------------------------
Confidence 999999999999999999999988876221000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......|+..|+|||++.+..++.++|||||||++
T Consensus 158 ---------------------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l 192 (284)
T cd06620 158 ---------------------------------------------IADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISI 192 (284)
T ss_pred ---------------------------------------------ccCccccCcccCCHHHHccCCCCccchHHHHHHHH
Confidence 00013678999999999888899999999999999
Q ss_pred hhccc---cCCCCchH----------HHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 302 FELFC---PFSTGEEK----------TRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 302 ~eLlt---pf~~~~~~----------~~~~~~l~~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|+|++ ||...... ......+.....+.......+ ...+|+.+||.+||.+|||+.|+++|+||...
T Consensus 193 ~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~~ 272 (284)
T cd06620 193 IELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPPRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQA 272 (284)
T ss_pred HHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccCCCCCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccc
Confidence 99998 66543221 111222222212211112233 45599999999999999999999999998765
No 271
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=99.96 E-value=2.2e-28 Score=255.58 Aligned_cols=206 Identities=14% Similarity=0.083 Sum_probs=154.6
Q ss_pred ehhhhcccCCCCCceecccceeecC--CCCCcEEEEEec-CCCCHHHHHhC-----CCCCCCHHHHHHHHHHHHHHHHHH
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENE--AAIDPFVHAIEW-GDVSLRQWLDK-----PKRSVDVYECLHIFRQIVEIVYAA 137 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~--~~~~~~~lv~E~-~ggsL~~~L~~-----~~~~l~~~~~~~i~~QIl~aL~yL 137 (720)
.|..++..++||||+++++.++... ......+++||| .+++|.+++.. ....+++..+..++.||+.||.||
T Consensus 49 ~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l 128 (272)
T cd05075 49 SEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYL 128 (272)
T ss_pred HHHHHHHhCCCCCcceEEEEEccCCcccCCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHH
Confidence 5677899999999999998443322 122357899999 88999998831 223489999999999999999999
Q ss_pred HHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCC
Q 004998 138 HSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 138 Hs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~ 217 (720)
|++||+||||||+|||++.++.++|+|||++......... .
T Consensus 129 H~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~------------------------------------~--- 169 (272)
T cd05075 129 SSKSFIHRDLAARNCMLNENMNVCVADFGLSKKIYNGDYY------------------------------------R--- 169 (272)
T ss_pred HHCCeeccccchhheEEcCCCCEEECCCCcccccCcccce------------------------------------e---
Confidence 9999999999999999999999999998887432111000 0
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhh
Q 004998 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRL 297 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSL 297 (720)
......+++.|+|||.+.+..++.++|||||
T Consensus 170 -------------------------------------------------~~~~~~~~~~~~~pe~~~~~~~~~~~Di~sl 200 (272)
T cd05075 170 -------------------------------------------------QGRIAKMPVKWIAIESLADRVYTTKSDVWSF 200 (272)
T ss_pred -------------------------------------------------cCCcccCCcccCCHHHccCCCcChHHHHHHH
Confidence 0000234678999999998889999999999
Q ss_pred hhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 298 GVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 298 Gvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
||++|||++ ||..... ......+..+..++..........+++.+||+++|.+|||+.++++
T Consensus 201 G~il~el~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~ 266 (272)
T cd05075 201 GVTMWEIATRGQTPYPGVEN-SEIYDYLRQGNRLKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRC 266 (272)
T ss_pred HHHHHHHHcCCCCCCCCCCH-HHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 999999987 5554333 3444445544333322223334569999999999999999999986
No 272
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=99.96 E-value=2.4e-28 Score=258.31 Aligned_cols=210 Identities=14% Similarity=0.124 Sum_probs=158.9
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC---------CCCCHHHHHHHHHHHHHHH
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---------RSVDVYECLHIFRQIVEIV 134 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~---------~~l~~~~~~~i~~QIl~aL 134 (720)
..|..++..++||||+++++ ++.... ..|++||| .+++|.+++.+.. ..++...+..++.||+.||
T Consensus 57 ~~e~~~l~~l~~~~i~~~~~-~~~~~~---~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 132 (288)
T cd05061 57 LNEASVMKGFTCHHVVRLLG-VVSKGQ---PTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 132 (288)
T ss_pred HHHHHHHHhCCCCCeeeEEE-EEcCCC---CcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHH
Confidence 35777899999999999999 444443 57999999 8999999995321 2346778899999999999
Q ss_pred HHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccccccccccc
Q 004998 135 YAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVT 214 (720)
Q Consensus 135 ~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~ 214 (720)
.|||++||+||||||+||+++.++.++|+|||+++..... ++.
T Consensus 133 ~~lH~~~i~H~dikp~nili~~~~~~~L~Dfg~~~~~~~~----------------------------------~~~--- 175 (288)
T cd05061 133 AYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYET----------------------------------DYY--- 175 (288)
T ss_pred HHHHhCCCcCCCCChheEEEcCCCcEEECcCCcccccccc----------------------------------ccc---
Confidence 9999999999999999999999999999999887432111 000
Q ss_pred CCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccc
Q 004998 215 APTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDI 294 (720)
Q Consensus 215 ~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDI 294 (720)
.......++..|+|||.+.+..++.++||
T Consensus 176 ---------------------------------------------------~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv 204 (288)
T cd05061 176 ---------------------------------------------------RKGGKGLLPVRWMAPESLKDGVFTTSSDM 204 (288)
T ss_pred ---------------------------------------------------cccCCCcccccccCHHHhccCCCChHhHH
Confidence 00001245677999999988889999999
Q ss_pred hhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc------Cccc
Q 004998 295 YRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ------SEFL 364 (720)
Q Consensus 295 wSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~------hp~~ 364 (720)
|||||++|||++ ||...... .....+..+..++......+...+++.+||+++|++|||+.++++ ||||
T Consensus 205 wslG~~l~el~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~~~ 283 (288)
T cd05061 205 WSFGVVLWEITSLAEQPYQGLSNE-QVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSF 283 (288)
T ss_pred HHHHHHHHHHHhCCCCCCCCCCHH-HHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCCCC
Confidence 999999999997 66543332 333444333333322222345569999999999999999999987 8888
Q ss_pred CCC
Q 004998 365 NEP 367 (720)
Q Consensus 365 ~~~ 367 (720)
.+.
T Consensus 284 ~~~ 286 (288)
T cd05061 284 PEV 286 (288)
T ss_pred CCC
Confidence 764
No 273
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.96 E-value=2.1e-28 Score=257.58 Aligned_cols=203 Identities=19% Similarity=0.230 Sum_probs=154.8
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC---------------CCCCCHHHHHHHH
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---------------KRSVDVYECLHIF 127 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~---------------~~~l~~~~~~~i~ 127 (720)
...|..++..++||||+++++ ++.... ..++++|| .+++|.+++... ...+++..++.++
T Consensus 55 ~~~e~~~~~~l~h~~iv~~~~-~~~~~~---~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (283)
T cd05091 55 FKHEAMMRSRLQHPNIVCLLG-VVTKEQ---PLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIV 130 (283)
T ss_pred HHHHHHHHhcCCCCCcCeEEE-EEcCCC---ceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHH
Confidence 336777889999999999999 554443 47899999 889999998321 1247888999999
Q ss_pred HHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccc
Q 004998 128 RQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRR 207 (720)
Q Consensus 128 ~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l 207 (720)
.||+.||.|||++||+||||||+||+++.++.+||+|||+++.....
T Consensus 131 ~ql~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--------------------------------- 177 (283)
T cd05091 131 TQIAAGMEFLSSHHVVHKDLATRNVLVFDKLNVKISDLGLFREVYAA--------------------------------- 177 (283)
T ss_pred HHHHHHHHHHHHcCccccccchhheEecCCCceEecccccccccccc---------------------------------
Confidence 99999999999999999999999999999999999999887432110
Q ss_pred cccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC
Q 004998 208 EDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP 287 (720)
Q Consensus 208 ~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~ 287 (720)
++ .. ......+++.|+|||.+.+..
T Consensus 178 -~~------------------------------------~~------------------~~~~~~~~~~y~aPE~~~~~~ 202 (283)
T cd05091 178 -DY------------------------------------YK------------------LMGNSLLPIRWMSPEAIMYGK 202 (283)
T ss_pred -hh------------------------------------ee------------------eccCccCCccccCHHHHhcCC
Confidence 00 00 000124578899999998888
Q ss_pred CCccccchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCch-HHHHHHHcCCCCCCCCCChHHHHc
Q 004998 288 VSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 288 ~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~-~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
++.++|||||||++|||++ ||...... .....+.....++. ....|. ..+|+..||+.+|.+||++.+|++
T Consensus 203 ~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~-~~~~~i~~~~~~~~-~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~ 278 (283)
T cd05091 203 FSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ-DVIEMIRNRQVLPC-PDDCPAWVYTLMLECWNEFPSRRPRFKDIHS 278 (283)
T ss_pred CCcchhHHHHHHHHHHHHcCCCCCCCCCCHH-HHHHHHHcCCcCCC-CCCCCHHHHHHHHHHhCCCcccCCCHHHHHH
Confidence 9999999999999999997 55444333 44444444443332 233444 459999999999999999999986
No 274
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=99.96 E-value=2.4e-28 Score=256.74 Aligned_cols=194 Identities=18% Similarity=0.221 Sum_probs=144.5
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|..+++.++||||+++++ ++.... ..++|||| .+++|..++.+....+++..+..++.||+.||.|||++||+|
T Consensus 65 ~~~~~~~~l~h~niv~~~~-~~~~~~---~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH 140 (274)
T cd05076 65 ETASLMSQVSHIHLAFVHG-VCVRGS---ENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVH 140 (274)
T ss_pred HHHHHHhcCCCCCeeeEEE-EEEeCC---ceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccC
Confidence 5667889999999999999 554443 56899999 999999999665556899999999999999999999999999
Q ss_pred ccCCCCcEEEccCCc-------eEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCC
Q 004998 145 HNVRPSCFVMSSFNH-------VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 145 rDLKP~NILl~~~~~-------vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~ 217 (720)
|||||+|||++..+. ++++|||.+ ....
T Consensus 141 ~dlkp~Nill~~~~~~~~~~~~~kl~d~g~~---------------------------------------------~~~~ 175 (274)
T cd05076 141 GNVCAKNILLARLGLAEGTSPFIKLSDPGVS---------------------------------------------FTAL 175 (274)
T ss_pred CCCCcccEEEeccCcccCccceeeecCCccc---------------------------------------------cccc
Confidence 999999999976432 455555443 2100
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-CCCCccccchh
Q 004998 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYR 296 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sDIwS 296 (720)
. .....++..|+|||.+.+ ..++.++||||
T Consensus 176 ~-------------------------------------------------~~~~~~~~~~~aPe~~~~~~~~~~~~Dv~s 206 (274)
T cd05076 176 S-------------------------------------------------REERVERIPWIAPECVPGGNSLSTAADKWS 206 (274)
T ss_pred c-------------------------------------------------ccccccCCcccCchhhcCCCCCCcHHHHHH
Confidence 0 000246778999999876 44899999999
Q ss_pred hhhhhhhccc----cCCCCchHHHHHHHhhc-CCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004998 297 LGVLLFELFC----PFSTGEEKTRTMSSLRH-RVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 297 LGvll~eLlt----pf~~~~~~~~~~~~l~~-~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~h 361 (720)
|||++|||++ ||....... ....+.. ...|+ ...+...+|+.+||+.+|++||++.++|++
T Consensus 207 lG~~l~el~~~g~~p~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~li~~cl~~~p~~Rps~~~il~~ 272 (274)
T cd05076 207 FGTTLLEICFDGEVPLKERTPSE-KERFYEKKHRLPE---PSCKELATLISQCLTYEPTQRPSFRTILRD 272 (274)
T ss_pred HHHHHHHHHhCCCCCccccChHH-HHHHHHhccCCCC---CCChHHHHHHHHHcccChhhCcCHHHHHHh
Confidence 9999999964 565433221 1111221 11222 234566799999999999999999999863
No 275
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=99.96 E-value=2.6e-28 Score=252.86 Aligned_cols=205 Identities=16% Similarity=0.133 Sum_probs=155.5
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHHc
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~-~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+...|..++++++||||+++++ .+.. ..++++||| .+++|.+++.+.. ..+++..++.++.||+.||.|||++
T Consensus 42 ~~~~e~~~l~~l~h~~iv~~~~-~~~~----~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~ 116 (257)
T cd05040 42 DFLKEAAIMHSLDHENLIRLYG-VVLT----HPLMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESK 116 (257)
T ss_pred HHHHHHHHHhhcCCCCccceeE-EEcC----CeEEEEEEecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhC
Confidence 4447888999999999999999 4433 368999999 8999999995544 4689999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004998 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
|++|+||||+||+++.++.+||+|||.+...+..... +
T Consensus 117 ~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~--------------------------------~---------- 154 (257)
T cd05040 117 RFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDH--------------------------------Y---------- 154 (257)
T ss_pred CccccccCcccEEEecCCEEEeccccccccccccccc--------------------------------e----------
Confidence 9999999999999999999999999887443211000 0
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhh
Q 004998 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
.. .....++..|+|||.+.+..++.++|||||||+
T Consensus 155 -------------------------~~--------------------~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~ 189 (257)
T cd05040 155 -------------------------VM--------------------EEHLKVPFAWCAPESLRTRTFSHASDVWMFGVT 189 (257)
T ss_pred -------------------------ec--------------------ccCCCCCceecCHHHhcccCcCchhhhHHHHHH
Confidence 00 001245778999999988889999999999999
Q ss_pred hhhccc----cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 301 LFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 301 l~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
+|||++ ||...... .....+............. +...+++.+||..+|++||++.++++
T Consensus 190 l~el~t~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 253 (257)
T cd05040 190 LWEMFTYGEEPWAGLSGS-QILKKIDKEGERLERPEACPQDIYNVMLQCWAHNPADRPTFAALRE 253 (257)
T ss_pred HHHHHhCCCCCCCCCCHH-HHHHHHHhcCCcCCCCccCCHHHHHHHHHHCCCCcccCCCHHHHHH
Confidence 999997 55433333 2333333211111122223 34559999999999999999999985
No 276
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.96 E-value=7.7e-29 Score=269.10 Aligned_cols=215 Identities=15% Similarity=0.136 Sum_probs=155.0
Q ss_pred ehhhhcccCCCCCceecccceeecCCC----------CCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHH
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAA----------IDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVY 135 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~----------~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~ 135 (720)
.|..++..++||||+++++.+...... ...+|++|||.+++|.+++... .+++..++.++.||+.||.
T Consensus 51 ~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~--~l~~~~~~~~~~qi~~aL~ 128 (342)
T cd07854 51 REIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGSLTELNSVYIVQEYMETDLANVLEQG--PLSEEHARLFMYQLLRGLK 128 (342)
T ss_pred HHHHHHHhcCCCcchhhHhhhcccccccccccccccccceEEEEeecccccHHHHHHcC--CCCHHHHHHHHHHHHHHHH
Confidence 577789999999999999844433221 1247999999667999988543 4899999999999999999
Q ss_pred HHHHcCceeccCCCCcEEEc-cCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccccccccccc
Q 004998 136 AAHSQGIVVHNVRPSCFVMS-SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVT 214 (720)
Q Consensus 136 yLHs~gIvHrDLKP~NILl~-~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~ 214 (720)
|||+.||+||||||+||+++ .++.++++|||.+......... ..
T Consensus 129 ~LH~~givH~dikp~Nili~~~~~~~kl~dfg~~~~~~~~~~~------------------------------~~----- 173 (342)
T cd07854 129 YIHSANVLHRDLKPANVFINTEDLVLKIGDFGLARIVDPHYSH------------------------------KG----- 173 (342)
T ss_pred HHHhCCcccCCCCHHHEEEcCCCceEEECCcccceecCCcccc------------------------------cc-----
Confidence 99999999999999999998 4557899888877332110000 00
Q ss_pred CCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-CCCCcccc
Q 004998 215 APTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASD 293 (720)
Q Consensus 215 ~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sD 293 (720)
......|+..|+|||.+.+ ..++.++|
T Consensus 174 ----------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~D 201 (342)
T cd07854 174 ----------------------------------------------------YLSEGLVTKWYRSPRLLLSPNNYTKAID 201 (342)
T ss_pred ----------------------------------------------------ccccccccccccCHHHHhCccccCchhh
Confidence 0001256889999998755 44889999
Q ss_pred chhhhhhhhhccc---cCCCCchHHHHHHHhhcC----------------------CCCc-----ccc-ccCchHHHHHH
Q 004998 294 IYRLGVLLFELFC---PFSTGEEKTRTMSSLRHR----------------------VLPP-----QLL-LKFPKEASFCL 342 (720)
Q Consensus 294 IwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~----------------------~~p~-----~~~-~~~p~~~~li~ 342 (720)
||||||++|+|++ ||............+... ..++ .+. .......+|+.
T Consensus 202 iwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 281 (342)
T cd07854 202 MWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLE 281 (342)
T ss_pred HHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHH
Confidence 9999999999999 676544332222221110 0000 011 12233459999
Q ss_pred HcCCCCCCCCCChHHHHcCcccCCCcc
Q 004998 343 WLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 343 ~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
+||.+||.+|||+.++|.||||+....
T Consensus 282 ~~L~~dP~~R~t~~ell~h~~~~~~~~ 308 (342)
T cd07854 282 QILTFNPMDRLTAEEALMHPYMSCYSC 308 (342)
T ss_pred HHhCCCchhccCHHHHhCCCccccccC
Confidence 999999999999999999999986543
No 277
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=99.96 E-value=1.9e-28 Score=254.40 Aligned_cols=209 Identities=22% Similarity=0.232 Sum_probs=165.1
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH-cC
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-QG 141 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs-~g 141 (720)
...|...+.+++||||+++++ ++... ...+++||| .+++|.+++... ..+++..++.++.||+.||.|||+ .|
T Consensus 46 ~~~e~~~l~~l~~~~i~~~~~-~~~~~---~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~l~~~l~~lh~~~~ 120 (264)
T cd06623 46 LLRELKTLRSCESPYVVKCYG-AFYKE---GEISIVLEYMDGGSLADLLKKV-GKIPEPVLAYIARQILKGLDYLHTKRH 120 (264)
T ss_pred HHHHHHHHHhcCCCCeeeEEE-EEccC---CeEEEEEEecCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHhccCC
Confidence 346777889999999999999 44443 368999999 889999999554 459999999999999999999999 99
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
++|+||+|+||+++.++.++|+|||.+........
T Consensus 121 ~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~--------------------------------------------- 155 (264)
T cd06623 121 IIHRDIKPSNLLINSKGEVKIADFGISKVLENTLD--------------------------------------------- 155 (264)
T ss_pred CccCCCCHHHEEECCCCCEEEccCccceecccCCC---------------------------------------------
Confidence 99999999999999999999999887733211100
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......++..|+|||.+.+..++.++||||||+++
T Consensus 156 ---------------------------------------------~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il 190 (264)
T cd06623 156 ---------------------------------------------QCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTL 190 (264)
T ss_pred ---------------------------------------------cccceeecccccCHhhhCCCCCCchhhHHHHHHHH
Confidence 00013568899999999888899999999999999
Q ss_pred hhccc---cCCCCc--hHHHHHHHhhcCCCCccccc-cCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 302 FELFC---PFSTGE--EKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 302 ~eLlt---pf~~~~--~~~~~~~~l~~~~~p~~~~~-~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|+|++ ||.... ........+.....++.... ......+++.+||+++|+.||++.++++||||+..
T Consensus 191 ~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~~~~~~~ 262 (264)
T cd06623 191 LECALGKFPFLPPGQPSFFELMQAICDGPPPSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQHPFIKKA 262 (264)
T ss_pred HHHHhCCCCCccccccCHHHHHHHHhcCCCCCCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhCHHHHhc
Confidence 99999 555443 33344455544444333333 23445599999999999999999999999999764
No 278
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=99.96 E-value=3.2e-28 Score=253.85 Aligned_cols=203 Identities=13% Similarity=0.146 Sum_probs=156.2
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..++.+++||||+++++ ++.... ..+++||| .+++|.+++......+++..++.++.|++.||.|||++||+
T Consensus 53 ~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~ 128 (266)
T cd05033 53 LTEASIMGQFDHPNIIRLEG-VVTKSR---PVMIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYV 128 (266)
T ss_pred HHHHHHHHhCCCCCcceEeE-EEecCC---ceEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 35777899999999999999 444432 57999999 89999999966555699999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
|+||||+||+++.++.++++|||.+....... ..+
T Consensus 129 H~di~p~nili~~~~~~~l~dfg~~~~~~~~~--------------------------------~~~------------- 163 (266)
T cd05033 129 HRDLAARNILVNSNLVCKVSDFGLSRRLEDSE--------------------------------ATY------------- 163 (266)
T ss_pred cCCCCcceEEEcCCCCEEECccchhhcccccc--------------------------------cce-------------
Confidence 99999999999999999999998874432100 000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......++..|+|||.+.+..++.++|||||||++|+
T Consensus 164 -------------------------------------------~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~ 200 (266)
T cd05033 164 -------------------------------------------TTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWE 200 (266)
T ss_pred -------------------------------------------eccCCCCCccccChhhhccCCCccccchHHHHHHHHH
Confidence 0000134678999999998889999999999999999
Q ss_pred ccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 304 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 304 Llt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|++ ||...... .....+.....++......+...+|+.+||+.+|++||++.++++
T Consensus 201 l~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~ 260 (266)
T cd05033 201 VMSYGERPYWDMSNQ-DVIKAVEDGYRLPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVS 260 (266)
T ss_pred HHccCCCCCCCCCHH-HHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 987 55443322 334444443332322223344559999999999999999999986
No 279
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=99.96 E-value=2.6e-28 Score=256.60 Aligned_cols=203 Identities=14% Similarity=0.094 Sum_probs=154.5
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
...|..++..++||||+++++ ++... ..+++||| .+++|.+++......+++..++.++.||+.||.|||++||
T Consensus 56 ~~~e~~~l~~~~~~~i~~~~~-~~~~~----~~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i 130 (279)
T cd05109 56 ILDEAYVMAGVGSPYVCRLLG-ICLTS----TVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRL 130 (279)
T ss_pred HHHHHHHHHhcCCCCCceEEE-EEcCC----CcEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 346777899999999999999 44332 35789999 8999999996655569999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.+||+|||+++........ +
T Consensus 131 iH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~~~~--------------------------------~------------ 166 (279)
T cd05109 131 VHRDLAARNVLVKSPNHVKITDFGLARLLDIDETE--------------------------------Y------------ 166 (279)
T ss_pred eccccccceEEEcCCCcEEECCCCceeecccccce--------------------------------e------------
Confidence 99999999999999999999998887432111000 0
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......+++.|+|||.+.+..++.++|||||||++|
T Consensus 167 --------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~ 202 (279)
T cd05109 167 --------------------------------------------HADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVW 202 (279)
T ss_pred --------------------------------------------ecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHH
Confidence 000013467799999998888999999999999999
Q ss_pred hccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 303 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 303 eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
||++ ||..... ......+.....++......+...+++.+||..||+.||++.+++.
T Consensus 203 el~t~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~ 263 (279)
T cd05109 203 ELMTFGAKPYDGIPA-REIPDLLEKGERLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVD 263 (279)
T ss_pred HHHcCCCCCCCCCCH-HHHHHHHHCCCcCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 9987 4443322 2233334443333333333445569999999999999999999985
No 280
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=99.96 E-value=2.4e-28 Score=256.67 Aligned_cols=202 Identities=14% Similarity=0.172 Sum_probs=150.1
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC------CCCCHHHHHHHHHHHHHHHHHHH
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK------RSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~------~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
.|..+++.++||||+++++ ++.... ..+++||| .|++|.+++.... ..+++..++.++.||+.||.|||
T Consensus 58 ~e~~~l~~l~~~~i~~~~~-~~~~~~---~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH 133 (277)
T cd05036 58 MEALIMSKFNHQNIVRLIG-VSFERL---PRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLE 133 (277)
T ss_pred HHHHHHHhCCCCCEeeEEE-EEccCC---CcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 5677899999999999999 443332 46899999 8999999994432 24899999999999999999999
Q ss_pred HcCceeccCCCCcEEEccCC---ceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccC
Q 004998 139 SQGIVVHNVRPSCFVMSSFN---HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTA 215 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~~~~---~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~ 215 (720)
++|++||||||+||+++.++ .+||+|||.++...... .+.
T Consensus 134 ~~~ivH~dlkp~nil~~~~~~~~~~kl~dfg~~~~~~~~~---------------------------------~~~---- 176 (277)
T cd05036 134 ENHFIHRDIAARNCLLTCKGPGRVAKIADFGMARDIYRAS---------------------------------YYR---- 176 (277)
T ss_pred HCCEeecccchheEEEeccCCCcceEeccCccccccCCcc---------------------------------cee----
Confidence 99999999999999998654 58998888774321100 000
Q ss_pred CCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccch
Q 004998 216 PTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIY 295 (720)
Q Consensus 216 ~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIw 295 (720)
.......+..|+|||++.+..++.++|||
T Consensus 177 ---------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Diw 205 (277)
T cd05036 177 ---------------------------------------------------KGGRAMLPIKWMPPEAFLDGIFTSKTDVW 205 (277)
T ss_pred ---------------------------------------------------cCCCCCccHhhCCHHHHhcCCcCchhHHH
Confidence 00001335679999999888899999999
Q ss_pred hhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcC
Q 004998 296 RLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 296 SLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rpta~eiL~h 361 (720)
||||++|||++ ||...... ..+..+..... ...+... +...+|+.+||..+|++||++.++++|
T Consensus 206 slG~il~el~~~g~~pf~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~ 274 (277)
T cd05036 206 SFGVLLWEIFSLGYMPYPGRTNQ-EVMEFVTGGGR-LDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILER 274 (277)
T ss_pred HHHHHHHHHHcCCCCCCCCCCHH-HHHHHHHcCCc-CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 99999999996 66654333 22222322211 1222233 344599999999999999999999975
No 281
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=99.95 E-value=1.8e-28 Score=257.12 Aligned_cols=208 Identities=16% Similarity=0.245 Sum_probs=159.0
Q ss_pred eeeehhhhcccCC---CCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 004998 63 RKHSDGVELTHGD---HLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 63 r~~~e~~~Ls~l~---HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
+.++|..+++.+. ||||+++++ .+..+. .+|++||| .|++|.+++... .+++..++.++.||+.||.|||
T Consensus 45 ~~~~e~~~l~~l~~~~~~~vi~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~--~l~~~~~~~i~~~i~~~l~~lh 118 (277)
T cd06917 45 DIQREVALLSQLRQSQPPNITKYYG-SYLKGP---RLWIIMEYAEGGSVRTLMKAG--PIAEKYISVIIREVLVALKYIH 118 (277)
T ss_pred HHHHHHHHHHHhccCCCCCeeeEee-eeeeCC---EEEEEEecCCCCcHHHHHHcc--CCCHHHHHHHHHHHHHHHHHHH
Confidence 3446667777776 999999999 444432 67999999 899999998553 5899999999999999999999
Q ss_pred HcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCC
Q 004998 139 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
+.||+|+||+|+||+++.++.++++|||.+........
T Consensus 119 ~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~------------------------------------------ 156 (277)
T cd06917 119 KVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSS------------------------------------------ 156 (277)
T ss_pred hCCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCcc------------------------------------------
Confidence 99999999999999999999999999887743211100
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-CCCccccchhh
Q 004998 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRL 297 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSL 297 (720)
......|+..|+|||.+.+. .++.++|+|||
T Consensus 157 ------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~sl 188 (277)
T cd06917 157 ------------------------------------------------KRSTFVGTPYWMAPEVITEGKYYDTKADIWSL 188 (277)
T ss_pred ------------------------------------------------ccccccCCcceeCHHHhccCCccccchhHHHH
Confidence 00113578899999998754 47899999999
Q ss_pred hhhhhhccc---cCCCCchHHHHHHHhhcCCCCccccc-cC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004998 298 GVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL-KF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 298 Gvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~-~~-p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
||++|+|++ ||....... ....+... .++.+.. .. +...+|+.+||..||++||++.+++.||||+...
T Consensus 189 G~~l~~ll~g~~p~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~~~~~~~~ 262 (277)
T cd06917 189 GITIYEMATGNPPYSDVDAFR-AMMLIPKS-KPPRLEDNGYSKLLREFVAACLDEEPKERLSAEELLKSKWIKAHS 262 (277)
T ss_pred HHHHHHHHhCCCCCCCCChhh-hhhccccC-CCCCCCcccCCHHHHHHHHHHcCCCcccCcCHHHHhhChHhhccc
Confidence 999999999 565443322 22222222 2333322 13 3455999999999999999999999999997763
No 282
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.95 E-value=3.7e-28 Score=253.26 Aligned_cols=210 Identities=16% Similarity=0.147 Sum_probs=160.5
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|+.++.+++||||+++++ .+.+.. ...++++||| .+++|.+++...+ .+++..++.++.||+.||.|||++|
T Consensus 50 ~~~~ei~~l~~l~h~~i~~~~~-~~~~~~-~~~~~~v~e~~~~~~L~~~~~~~~-~l~~~~~~~~~~~i~~al~~LH~~~ 126 (264)
T cd06653 50 ALECEIQLLKNLRHDRIVQYYG-CLRDPE-EKKLSIFVEYMPGGSIKDQLKAYG-ALTENVTRRYTRQILQGVSYLHSNM 126 (264)
T ss_pred HHHHHHHHHHHcCCCCcceEEE-EEEcCC-CCEEEEEEEeCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 4457888999999999999999 443332 2357899999 8999999995543 3899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+|+||||+||+++.++.++|+|||.+........ .+.
T Consensus 127 i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~-------------------------------~~~----------- 164 (264)
T cd06653 127 IVHRDIKGANILRDSAGNVKLGDFGASKRIQTICM-------------------------------SGT----------- 164 (264)
T ss_pred EecCCCCHHHEEEcCCCCEEECccccccccccccc-------------------------------cCc-----------
Confidence 99999999999999999999999988743211000 000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......|+..|+|||.+.+..++.++|||||||++
T Consensus 165 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 199 (264)
T cd06653 165 ---------------------------------------------GIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTV 199 (264)
T ss_pred ---------------------------------------------cccccCCcccccCHhhhcCCCCCccccHHHHHHHH
Confidence 00013578899999999888899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
|+|++ ||............. ....++.++... +...+|+.+||. +|..||++.+++.|||.
T Consensus 200 ~~l~~g~~p~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~~~~ 264 (264)
T cd06653 200 VEMLTEKPPWAEYEAMAAIFKIA-TQPTKPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRHPFV 264 (264)
T ss_pred HHHHhCCCCCCccCHHHHHHHHH-cCCCCCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhcCCCC
Confidence 99999 665544443333332 222333344444 445599999999 57999999999999985
No 283
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=99.95 E-value=2.4e-28 Score=257.00 Aligned_cols=205 Identities=16% Similarity=0.242 Sum_probs=153.4
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCC--CCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPK--RSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~--~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.|..++++++||||+++++ .+.... .++++|||..++|.+++.... ..+++..++.++.||+.||.|||+.||+
T Consensus 47 ~E~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~ 122 (284)
T cd07836 47 REISLMKELKHENIVRLHD-VIHTEN---KLMLVFEYMDKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVL 122 (284)
T ss_pred HHHHHHHhhcCCCEeeeee-eEeeCC---cEEEEEecCCccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 5777999999999999999 454443 579999996679999985433 4589999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+||++++++.++++|||.+....... .
T Consensus 123 h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~--------------------------------~--------------- 155 (284)
T cd07836 123 HRDLKPQNLLINKRGELKLADFGLARAFGIPV--------------------------------N--------------- 155 (284)
T ss_pred eCCCCHHHEEECCCCcEEEeecchhhhhcCCc--------------------------------c---------------
Confidence 99999999999999999999998873321110 0
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC-CCccccchhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLF 302 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGvll~ 302 (720)
......+++.|+|||.+.+.. ++.++|||||||++|
T Consensus 156 -------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~ 192 (284)
T cd07836 156 -------------------------------------------TFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMA 192 (284)
T ss_pred -------------------------------------------ccccccccccccChHHhcCCCCCCcHHHHHHHHHHHH
Confidence 000135688999999987654 789999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhc-------------------CCCCcc--------ccccCchHHHHHHHcCCCCCCCC
Q 004998 303 ELFC---PFSTGEEKTRTMSSLRH-------------------RVLPPQ--------LLLKFPKEASFCLWLLHPEPSGR 352 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~-------------------~~~p~~--------~~~~~p~~~~li~~~L~~dP~~R 352 (720)
+|++ ||............+.. ...+.. .....+...+++.+||+.||.+|
T Consensus 193 ~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R 272 (284)
T cd07836 193 EMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELR 272 (284)
T ss_pred HHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccC
Confidence 9999 55443322111111110 000000 01122344599999999999999
Q ss_pred CChHHHHcCccc
Q 004998 353 PKMGELLQSEFL 364 (720)
Q Consensus 353 pta~eiL~hp~~ 364 (720)
|++.++++||||
T Consensus 273 ~~~~~~l~~~~f 284 (284)
T cd07836 273 ISAHDALQHPWF 284 (284)
T ss_pred CCHHHHhcCCCC
Confidence 999999999998
No 284
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=99.95 E-value=1.6e-28 Score=255.85 Aligned_cols=203 Identities=17% Similarity=0.234 Sum_probs=155.8
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC---CCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~---~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
...|..++..++||||+++++. +..+. ..+++||| .|++|.+++.. ....+++..++.++.||+.||.|||+
T Consensus 49 ~~~e~~~l~~~~h~~i~~~~~~-~~~~~---~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~ 124 (267)
T cd08229 49 CIKEIDLLKQLNHPNVIKYYAS-FIEDN---ELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHS 124 (267)
T ss_pred HHHHHHHHHHccCCchhhhhhe-eEeCC---eEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 3367788999999999999994 43332 57999999 88999999842 23458999999999999999999999
Q ss_pred cCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004998 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+|++|+||||+||+++.++.++++|||.+........
T Consensus 125 ~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~------------------------------------------- 161 (267)
T cd08229 125 RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT------------------------------------------- 161 (267)
T ss_pred CCeecCCCCHHHEEEcCCCCEEECcchhhhccccCCc-------------------------------------------
Confidence 9999999999999999999999998887633211100
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhh
Q 004998 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
......|+..|+|||.+.+..++.++|||||||
T Consensus 162 -----------------------------------------------~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~ 194 (267)
T cd08229 162 -----------------------------------------------AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGC 194 (267)
T ss_pred -----------------------------------------------ccccccCCcCccCHHHhcCCCccchhhHHHHHH
Confidence 000135788999999998888999999999999
Q ss_pred hhhhccc---cCCCCch-HHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 300 LLFELFC---PFSTGEE-KTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 300 ll~eLlt---pf~~~~~-~~~~~~~l~~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
++|+|++ ||..... .......+.....++......+ ...+|+.+||+.+|.+|||+.+|++
T Consensus 195 il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~ 260 (267)
T cd08229 195 LLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDITYVYD 260 (267)
T ss_pred HHHHHHhCCCCcccccchHHHHhhhhhcCCCCCCCcccccHHHHHHHHHhcCCCcccCCCHHHHHH
Confidence 9999999 5543322 2233333443334433333333 4559999999999999999998875
No 285
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=99.95 E-value=3.9e-28 Score=249.08 Aligned_cols=204 Identities=17% Similarity=0.243 Sum_probs=158.6
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..++++++||||+++++ ++.... ..++++|| .|++|.+++......+++..+..++.||+.||.|||+.|+
T Consensus 44 ~~~e~~~l~~l~~~~i~~~~~-~~~~~~---~~~l~~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i 119 (253)
T cd05122 44 IINEIQILKKCKHPNIVKYYG-SYLKKD---ELWIVMEFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGI 119 (253)
T ss_pred HHHHHHHHHhCCCCCEeEEEE-EEecCC---eEEEEEecCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCE
Confidence 336777899999999999999 444442 57999999 8899999996654569999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+|+||+|+||+++.++.++|+|||.+...+....
T Consensus 120 ~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~---------------------------------------------- 153 (253)
T cd05122 120 IHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA---------------------------------------------- 153 (253)
T ss_pred ecCCCCHHHEEEccCCeEEEeecccccccccccc----------------------------------------------
Confidence 9999999999999999999999988743211100
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
.....|+..|+|||.+.+..++.++||||||+++|
T Consensus 154 ---------------------------------------------~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~ 188 (253)
T cd05122 154 ---------------------------------------------RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAI 188 (253)
T ss_pred ---------------------------------------------ccceecCCcccCHHHHcCCCCCccccHHHHHHHHH
Confidence 00135788899999998888999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCCCCcccccc--CchHHHHHHHcCCCCCCCCCChHHHHcCcc
Q 004998 303 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLK--FPKEASFCLWLLHPEPSGRPKMGELLQSEF 363 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~--~p~~~~li~~~L~~dP~~Rpta~eiL~hp~ 363 (720)
+|++ ||.......... .......+...... .....+|+.+||..||++|||+.++|+|||
T Consensus 189 ~l~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~~~ 253 (253)
T cd05122 189 ELAEGKPPYSELPPMKALF-KIATNGPPGLRNPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKHPF 253 (253)
T ss_pred HHHhCCCCCCCCchHHHHH-HHHhcCCCCcCcccccCHHHHHHHHHHccCChhhCCCHHHHhcCCC
Confidence 9999 555443322222 22222222211111 234459999999999999999999999998
No 286
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=99.95 E-value=4.3e-28 Score=250.16 Aligned_cols=204 Identities=16% Similarity=0.166 Sum_probs=156.4
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+...|..+++.++||||+++++ ++.... ..+++||| .+++|.+++......+++..++.++.||+.||.|||++|
T Consensus 38 ~~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ 113 (250)
T cd05085 38 KFLSEARILKQYDHPNIVKLIG-VCTQRQ---PIYIVMELVPGGDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKN 113 (250)
T ss_pred HHHHHHHHHHhCCCCCcCeEEE-EEecCC---ccEEEEECCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3446777899999999999999 554443 57999999 899999999655556899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
++||||||+||+++.++.++++|||++...... .+ .
T Consensus 114 ~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~----------------------------------~~---~------- 149 (250)
T cd05085 114 CIHRDLAARNCLVGENNVLKISDFGMSRQEDDG----------------------------------IY---S------- 149 (250)
T ss_pred eeecccChheEEEcCCCeEEECCCccceecccc----------------------------------cc---c-------
Confidence 999999999999999999999998877321000 00 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......++..|+|||++.+..++.++|||||||++
T Consensus 150 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll 184 (250)
T cd05085 150 ---------------------------------------------SSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILL 184 (250)
T ss_pred ---------------------------------------------cCCCCCCcccccCHHHhccCCCCchhHHHHHHHHH
Confidence 00001235679999999888899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|+|++ ||...... .....+.............+...+|+.+||..+|++||++.++++
T Consensus 185 ~~~~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 246 (250)
T cd05085 185 WETFSLGVCPYPGMTNQ-QAREQVEKGYRMSCPQKCPDDVYKVMQRCWDYKPENRPKFSELQK 246 (250)
T ss_pred HHHhcCCCCCCCCCCHH-HHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 99997 66554333 333444433322222223345569999999999999999999976
No 287
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.95 E-value=1.8e-28 Score=288.13 Aligned_cols=103 Identities=10% Similarity=0.093 Sum_probs=90.6
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+...|..++..++||||+++++ ++.... .+|+|||| .|++|.+++...+ .+++..++.|+.||+.||+|||.+|
T Consensus 50 ~~~~E~~~l~~l~hp~Iv~~~~-~~~~~~---~~~lVmEy~~g~~L~~li~~~~-~l~~~~~~~i~~qil~aL~yLH~~g 124 (669)
T cd05610 50 QVQAERDALALSKSPFIVHLYY-SLQSAN---NVYLVMEYLIGGDVKSLLHIYG-YFDEEMAVKYISEVALALDYLHRHG 124 (669)
T ss_pred HHHHHHHHHHhcCCCCcCeEEE-EEEECC---EEEEEEeCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3446777888999999999998 554443 68999999 8999999995543 4899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccC
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSD 170 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~ 170 (720)
||||||||+||||+.++.++|+|||+++.
T Consensus 125 IiHrDLKP~NILl~~~g~vkL~DFGls~~ 153 (669)
T cd05610 125 IIHRDLKPDNMLISNEGHIKLTDFGLSKV 153 (669)
T ss_pred EEeCCccHHHEEEcCCCCEEEEeCCCCcc
Confidence 99999999999999999999999999874
No 288
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=99.95 E-value=3.9e-28 Score=251.92 Aligned_cols=202 Identities=19% Similarity=0.211 Sum_probs=153.7
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..|..+++.++|||||++++ ++... .++++||| .+++|.++|.+.. .+++..++.++.||+.||.|||..|++
T Consensus 44 ~~e~~~l~~l~h~~iv~~~~-~~~~~----~~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lh~~~i~ 117 (257)
T cd05060 44 LREASVMAQLDHPCIVRLIG-VCKGE----PLMLVMELAPLGPLLKYLKKRR-EIPVSDLKELAHQVAMGMAYLESKHFV 117 (257)
T ss_pred HHHHHHHHhcCCCCeeeEEE-EEcCC----ceEEEEEeCCCCcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHhhcCee
Confidence 36777899999999999999 44432 47999999 8899999996544 589999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
|+||||+|||++.++.++|+|||.+...+... .+
T Consensus 118 H~di~p~nili~~~~~~kl~df~~~~~~~~~~---------------------------------~~------------- 151 (257)
T cd05060 118 HRDLAARNVLLVNRHQAKISDFGMSRALGAGS---------------------------------DY------------- 151 (257)
T ss_pred ccCcccceEEEcCCCcEEeccccccceeecCC---------------------------------cc-------------
Confidence 99999999999999999999998874321110 00
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
+ . ......++..|+|||.+.+..++.++|||||||++||
T Consensus 152 --------~--------------~-------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ 190 (257)
T cd05060 152 --------Y--------------R-------------------ATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWE 190 (257)
T ss_pred --------c--------------c-------------------cccCccccccccCHHHhcCCCCCccchHHHHHHHHHH
Confidence 0 0 0000123567999999988889999999999999999
Q ss_pred ccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 304 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 304 Llt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|++ ||...... .....+......+......+...+++.+||.++|.+||++.++++
T Consensus 191 ~~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~ 250 (257)
T cd05060 191 AFSYGAKPYGEMKGA-EVIAMLESGERLPRPEECPQEIYSIMLSCWKYRPEDRPTFSELES 250 (257)
T ss_pred HHcCCCCCcccCCHH-HHHHHHHcCCcCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 996 45443332 333444433322222223345569999999999999999999975
No 289
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=99.95 E-value=3.4e-28 Score=255.88 Aligned_cols=205 Identities=18% Similarity=0.248 Sum_probs=154.1
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~-~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|..++++++||||+++++ ++.++ ...|++|||.+++|.+++.... ..+++..++.++.||+.||.|||++|++|
T Consensus 47 ~E~~~l~~l~~~~iv~~~~-~~~~~---~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H 122 (283)
T cd07835 47 REISLLKELNHPNIVRLLD-VVHSE---NKLYLVFEFLDLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLH 122 (283)
T ss_pred HHHHHHHhcCCCCccCHhh-eeccC---CeEEEEEeccCcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeC
Confidence 5777899999999999999 44444 3689999996679999994433 35899999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||+|+||+++.++.++|+|||.+...+.... .
T Consensus 123 ~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~--------------------------------~--------------- 155 (283)
T cd07835 123 RDLKPQNLLIDREGALKLADFGLARAFGVPVR--------------------------------T--------------- 155 (283)
T ss_pred CCCCHHHEEEcCCCcEEEeecccccccCCCcc--------------------------------c---------------
Confidence 99999999999999999999988743211100 0
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-CCCccccchhhhhhhhh
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFE 303 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGvll~e 303 (720)
.....+++.|+|||++.+. .++.++|||||||++|+
T Consensus 156 -------------------------------------------~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~ 192 (283)
T cd07835 156 -------------------------------------------YTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAE 192 (283)
T ss_pred -------------------------------------------cCccccccCCCCCceeecCcccCcHHHHHHHHHHHHH
Confidence 0012457889999988765 47899999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCC-------------------CC----c---c-ccccCchHHHHHHHcCCCCCCCCC
Q 004998 304 LFC---PFSTGEEKTRTMSSLRHRV-------------------LP----P---Q-LLLKFPKEASFCLWLLHPEPSGRP 353 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~~-------------------~p----~---~-~~~~~p~~~~li~~~L~~dP~~Rp 353 (720)
|++ ||................. ++ + . .....+...+|+.+||+++|.+||
T Consensus 193 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp 272 (283)
T cd07835 193 MVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRI 272 (283)
T ss_pred HHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCc
Confidence 999 5554433222222111100 00 0 0 111123445999999999999999
Q ss_pred ChHHHHcCccc
Q 004998 354 KMGELLQSEFL 364 (720)
Q Consensus 354 ta~eiL~hp~~ 364 (720)
|+.|+++||||
T Consensus 273 t~~~il~~~~~ 283 (283)
T cd07835 273 SAKAALQHPYF 283 (283)
T ss_pred CHHHHhcCCCC
Confidence 99999999997
No 290
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=99.95 E-value=3.8e-28 Score=252.39 Aligned_cols=200 Identities=16% Similarity=0.176 Sum_probs=153.5
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.|..++.+++||||+++++ .+.... ..+++||| .+++|.+++.. ....++...++.++.||+.||.|||+.|++
T Consensus 50 ~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~ 125 (261)
T cd05072 50 EEANLMKTLQHDKLVRLYA-VVTKEE---PIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYI 125 (261)
T ss_pred HHHHHHHhCCCCCeeeEEE-EEcCCC---CcEEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 5777899999999999998 444433 57999999 89999999943 344589999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+||+++.++.++|+|||.+.........
T Consensus 126 H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~---------------------------------------------- 159 (261)
T cd05072 126 HRDLRAANVLVSESLMCKIADFGLARVIEDNEYT---------------------------------------------- 159 (261)
T ss_pred ccccchhhEEecCCCcEEECCCccceecCCCcee----------------------------------------------
Confidence 9999999999999999999988887432110000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......++..|+|||.+.+..++.++|||||||++|+
T Consensus 160 -------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ 196 (261)
T cd05072 160 -------------------------------------------AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYE 196 (261)
T ss_pred -------------------------------------------ccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHH
Confidence 0000234678999999988889999999999999999
Q ss_pred ccc----cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 304 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 304 Llt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|++ ||...... .....+.+....+.. ...| ...+|+.+||+.+|++||+++++++
T Consensus 197 l~t~g~~p~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 256 (261)
T cd05072 197 IVTYGKIPYPGMSNS-DVMSALQRGYRMPRM-ENCPDELYDIMKTCWKEKAEERPTFDYLQS 256 (261)
T ss_pred HHccCCCCCCCCCHH-HHHHHHHcCCCCCCC-CCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 997 55443332 334444443333332 2344 4459999999999999999999874
No 291
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=99.95 E-value=3.3e-28 Score=250.87 Aligned_cols=204 Identities=22% Similarity=0.303 Sum_probs=160.7
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC---CCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---KRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~---~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
..|..++..++|||++++++ .+... ..+++++|| .+++|.+++... ...+++..+..++.||+.||.|||++
T Consensus 47 ~~e~~~l~~l~~~~~~~~~~-~~~~~---~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~ 122 (258)
T cd08215 47 LNEVKILKKLNHPNIIKYYE-SFEEK---GKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSR 122 (258)
T ss_pred HHHHHHHHhcCCCChhheEE-EEecC---CEEEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhC
Confidence 36677899999999999999 44333 368999999 889999999553 35699999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004998 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
|++|+||+|+||+++.++.++|+|||.+...+....
T Consensus 123 ~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~-------------------------------------------- 158 (258)
T cd08215 123 KILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVD-------------------------------------------- 158 (258)
T ss_pred CEecccCChHHeEEcCCCcEEECCccceeecccCcc--------------------------------------------
Confidence 999999999999999999999999887733211100
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhh
Q 004998 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
......|++.|+|||.+.+..++.++|+||||++
T Consensus 159 ----------------------------------------------~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~ 192 (258)
T cd08215 159 ----------------------------------------------LAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCV 192 (258)
T ss_pred ----------------------------------------------eecceeeeecccChhHhccCCCCccccHHHHHHH
Confidence 0001357889999999988889999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004998 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
+|+|++ ||...... .....+.....++ +....+ ...+++.+||..+|++|||+.++|+||||
T Consensus 193 ~~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 258 (258)
T cd08215 193 LYELCTLKHPFEGENLL-ELALKILKGQYPP-IPSQYSSELRNLVSSLLQKDPEERPSIAQILQSPFI 258 (258)
T ss_pred HHHHHcCCCCCCCCcHH-HHHHHHhcCCCCC-CCCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCCCC
Confidence 999999 55544332 3333333333333 222333 44599999999999999999999999997
No 292
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.95 E-value=1.9e-28 Score=253.29 Aligned_cols=224 Identities=17% Similarity=0.179 Sum_probs=160.5
Q ss_pred ehhhhcccCCCC------CceecccceeecCCCCCcEEEEEecCCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHH
Q 004998 66 SDGVELTHGDHL------RNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 66 ~e~~~Ls~l~Hp------nIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
.|..+|.++.+. -+|++.+ +|+-. .+.|||+|..|.|+.++|.. +..+++...++.|.+||+.+|.|||
T Consensus 134 iEi~vLqki~~~DP~g~~rcv~m~~-wFdyr---ghiCivfellG~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh 209 (415)
T KOG0671|consen 134 IEIEVLQKINESDPNGKFRCVQMRD-WFDYR---GHICIVFELLGLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLH 209 (415)
T ss_pred HHHHHHHHHHhcCCCCceEEEeeeh-hhhcc---CceEEEEeccChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHH
Confidence 455566666432 2466666 45444 37899999999999999944 5667999999999999999999999
Q ss_pred HcCceeccCCCCcEEEccCCceEEeccCcc-cCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCC
Q 004998 139 SQGIVVHNVRPSCFVMSSFNHVSFIESASC-SDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~~~~~vkliDfg~a-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~ 217 (720)
+.+++|-||||+|||+.++...+.-+.+.. ... +. ..-.-+++.|||-|++..
T Consensus 210 ~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~~----------------r~----------~ks~~I~vIDFGsAtf~~ 263 (415)
T KOG0671|consen 210 DLKLTHTDLKPENILFVSSEYFKTYNPKKKVCFI----------------RP----------LKSTAIKVIDFGSATFDH 263 (415)
T ss_pred hcceeecCCChheEEEeccceEEEeccCCcccee----------------cc----------CCCcceEEEecCCcceec
Confidence 999999999999999988777666433221 000 00 000124567777665432
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhh
Q 004998 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRL 297 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSL 297 (720)
.. ....+.|..|+|||++.+-+++.++||||+
T Consensus 264 e~------------------------------------------------hs~iVsTRHYRAPEViLgLGwS~pCDvWSi 295 (415)
T KOG0671|consen 264 EH------------------------------------------------HSTIVSTRHYRAPEVILGLGWSQPCDVWSI 295 (415)
T ss_pred cC------------------------------------------------cceeeeccccCCchheeccCcCCccCceee
Confidence 21 012577999999999999999999999999
Q ss_pred hhhhhhccccC---CCCc--hHHHHHHHhhcCCCCccccccC--------------------------------------
Q 004998 298 GVLLFELFCPF---STGE--EKTRTMSSLRHRVLPPQLLLKF-------------------------------------- 334 (720)
Q Consensus 298 Gvll~eLltpf---~~~~--~~~~~~~~l~~~~~p~~~~~~~-------------------------------------- 334 (720)
||||+||.+|+ ...+ ++.++|..+.. .+|.......
T Consensus 296 GCIL~ElytG~~LFqtHen~EHLaMMerIlG-p~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~ 374 (415)
T KOG0671|consen 296 GCILVELYTGETLFQTHENLEHLAMMERILG-PIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQ 374 (415)
T ss_pred eeEEEEeeccceecccCCcHHHHHHHHHhhC-CCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhcc
Confidence 99999999954 3333 44456655554 3332211110
Q ss_pred -----chHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004998 335 -----PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 335 -----p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
....||+.+||.+||.+|+|+.|+|.||||+...
T Consensus 375 ~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~HpFF~~~~ 413 (415)
T KOG0671|consen 375 DDLEHVQLFDLLRRMLEFDPARRITLREALSHPFFARLT 413 (415)
T ss_pred CcHHHhHHHHHHHHHHccCccccccHHHHhcCHHhhcCC
Confidence 0123899999999999999999999999998763
No 293
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=99.95 E-value=3.2e-28 Score=252.09 Aligned_cols=196 Identities=16% Similarity=0.184 Sum_probs=148.2
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|+.++||||+++++ ++... ..+++||| .+++|.+++......++...++.++.||+.||.|||++|
T Consensus 47 ~~~~e~~~l~~l~h~~i~~~~~-~~~~~----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~ 121 (259)
T cd05037 47 AFFETASLMSQLSHKHLVKLYG-VCVRD----ENIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKK 121 (259)
T ss_pred HHHHHHHHHHcCCCcchhheee-EEecC----CcEEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence 3446777899999999999999 44332 45899999 899999999665546899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCC-------ceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccccccccccc
Q 004998 142 IVVHNVRPSCFVMSSFN-------HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVT 214 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~-------~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~ 214 (720)
|+||||||+||+++.++ .++++|||.+......
T Consensus 122 i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~~~~~---------------------------------------- 161 (259)
T cd05037 122 LVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVLSR---------------------------------------- 161 (259)
T ss_pred eecccCccceEEEecCccccCCceeEEeCCCCcccccccc----------------------------------------
Confidence 99999999999999877 6888777766321100
Q ss_pred CCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC--CCCccc
Q 004998 215 APTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA--PVSCAS 292 (720)
Q Consensus 215 ~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~--~~s~~s 292 (720)
....++..|+|||++.+. .++.++
T Consensus 162 ------------------------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~~~ 187 (259)
T cd05037 162 ------------------------------------------------------EERVERIPWIAPECIRNGQASLTIAA 187 (259)
T ss_pred ------------------------------------------------------cccccCCCccChhhhcCCCCCcchhh
Confidence 002456779999999877 689999
Q ss_pred cchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 293 DIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 293 DIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||||||++|||++ ||...... ............+ ........+|+.+||..+|.+|||+.++++
T Consensus 188 Di~slG~~~~~l~~~~~~p~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 256 (259)
T cd05037 188 DKWSFGTTLLEICSNGEEPLSTLSSS-EKERFYQDQHRLP--MPDCAELANLINQCWTYDPTKRPSFRAILR 256 (259)
T ss_pred HHHHHHHHHHHHHhCCCCCcccCCch-hHHHHHhcCCCCC--CCCchHHHHHHHHHhccChhhCCCHHHHHH
Confidence 99999999999987 34333211 1111111111111 112256679999999999999999999986
No 294
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=99.95 E-value=4.1e-28 Score=255.57 Aligned_cols=203 Identities=17% Similarity=0.134 Sum_probs=149.0
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
+|..+|.+++||||+++++ ++.... ...++++||| .+++|.+++... .+++..++.++.||+.||.|||++||+|
T Consensus 55 ~E~~~l~~l~h~~i~~~~~-~~~~~~-~~~~~lv~e~~~~~~l~~~~~~~--~l~~~~~~~i~~~l~~~l~~lH~~~i~H 130 (283)
T cd05080 55 KEINILKTLYHENIVKYKG-CCSEQG-GKGLQLIMEYVPLGSLRDYLPKH--KLNLAQLLLFAQQICEGMAYLHSQHYIH 130 (283)
T ss_pred HHHHHHHhCCCCCEeeEEE-EEecCC-CceEEEEecCCCCCCHHHHHHHc--CCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 5777999999999999999 443322 2357999999 999999999543 3999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+||+++.++.++|+|||.+........ .+
T Consensus 131 ~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~--------------------------------~~-------------- 164 (283)
T cd05080 131 RDLAARNVLLDNDRLVKIGDFGLAKAVPEGHE--------------------------------YY-------------- 164 (283)
T ss_pred cccChheEEEcCCCcEEEeecccccccCCcch--------------------------------hh--------------
Confidence 99999999999999999999988743211100 00
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhc
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 304 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eL 304 (720)
.. .....++..|+|||.+.+..++.++|||||||++|||
T Consensus 165 ---------------------~~--------------------~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el 203 (283)
T cd05080 165 ---------------------RV--------------------REDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYEL 203 (283)
T ss_pred ---------------------cc--------------------CCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHH
Confidence 00 0001346679999999888899999999999999999
Q ss_pred cc---cCCCCchHHH--------------HHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 305 FC---PFSTGEEKTR--------------TMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 305 lt---pf~~~~~~~~--------------~~~~l~~~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
++ ||........ ....+.....++ ..... +...+|+..||.++|++|||+.++++
T Consensus 204 ~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~ 276 (283)
T cd05080 204 LTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERGMRLP-CPKNCPQEVYILMKNCWETEAKFRPTFRSLIP 276 (283)
T ss_pred HhCCCCCCCCcchhhhhhcccccccchhhhhhhhhcCCCCC-CCCCCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 99 4432211100 000011111111 12223 34459999999999999999999985
No 295
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=99.95 E-value=4.3e-28 Score=258.55 Aligned_cols=204 Identities=15% Similarity=0.176 Sum_probs=154.8
Q ss_pred eehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 65 HSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 65 ~~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
..|..+++++ +||||+++++ .+.... ..|++||| .+++|.+++.. ....+++.+++.++.||+.||.|||++|
T Consensus 86 ~~E~~~l~~l~~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ 161 (302)
T cd05055 86 MSELKIMSHLGNHENIVNLLG-ACTIGG---PILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKN 161 (302)
T ss_pred HHHHHHHHhccCCCCcceEEE-EEecCC---ceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3577789999 8999999999 554443 57999999 88999999954 3334899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+|+||||+|||++.++.++++|||.+....... .+
T Consensus 162 ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~---------------------------------~~----------- 197 (302)
T cd05055 162 CIHRDLAARNVLLTHGKIVKICDFGLARDIMNDS---------------------------------NY----------- 197 (302)
T ss_pred eehhhhccceEEEcCCCeEEECCCcccccccCCC---------------------------------ce-----------
Confidence 9999999999999999999999998874321110 00
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
. ......++..|+|||.+.+..++.++|||||||++
T Consensus 198 ---~-----------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil 233 (302)
T cd05055 198 ---V-----------------------------------------VKGNARLPVKWMAPESIFNCVYTFESDVWSYGILL 233 (302)
T ss_pred ---e-----------------------------------------ecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHH
Confidence 0 00002357789999999888899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||............+..+..++......+...+|+.+||.++|++|||+.|+++
T Consensus 234 ~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~ 296 (302)
T cd05055 234 WEIFSLGSNPYPGMPVDSKFYKLIKEGYRMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQ 296 (302)
T ss_pred HHHHhCCCCCcCCCCchHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 99986 555444333333333333222222222345569999999999999999999985
No 296
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=99.95 E-value=4.1e-28 Score=255.54 Aligned_cols=207 Identities=15% Similarity=0.193 Sum_probs=152.6
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..++++++||||+++++ ++..+. ..+++||| .++.|..++.+ ...+++.+++.++.||+.||.|||++||
T Consensus 47 ~~~e~~~l~~l~~~~i~~~~~-~~~~~~---~~~iv~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~~i~~~l~~LH~~~i 121 (288)
T cd07833 47 ALREVKVLRQLRHENIVNLKE-AFRRKG---RLYLVFEYVERTLLELLEAS-PGGLPPDAVRSYIWQLLQAIAYCHSHNI 121 (288)
T ss_pred HHHHHHHHHhcCCCCeeehhh-eEEECC---EEEEEEecCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 346778999999999999999 444432 57999999 55444444433 3459999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+|+||+|+||+++.++.++|+|||.+........
T Consensus 122 ~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~---------------------------------------------- 155 (288)
T cd07833 122 IHRDIKPENILVSESGVLKLCDFGFARALRARPA---------------------------------------------- 155 (288)
T ss_pred ecCCCCHHHeEECCCCCEEEEeeecccccCCCcc----------------------------------------------
Confidence 9999999999999999999999988743211100
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-CCCccccchhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLL 301 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGvll 301 (720)
.......++.+|+|||++.+. .++.++|||||||++
T Consensus 156 -------------------------------------------~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l 192 (288)
T cd07833 156 -------------------------------------------SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIM 192 (288)
T ss_pred -------------------------------------------ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHH
Confidence 000113578899999999888 689999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhh--cC------------------CCCc---------ccccc-CchHHHHHHHcCCCC
Q 004998 302 FELFC---PFSTGEEKTRTMSSLR--HR------------------VLPP---------QLLLK-FPKEASFCLWLLHPE 348 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~--~~------------------~~p~---------~~~~~-~p~~~~li~~~L~~d 348 (720)
|+|++ ||.............. .. .+++ .+... .+...+|+.+||.++
T Consensus 193 ~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~ 272 (288)
T cd07833 193 AELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMD 272 (288)
T ss_pred HHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccC
Confidence 99999 4544333222111100 00 0000 01111 234559999999999
Q ss_pred CCCCCChHHHHcCccc
Q 004998 349 PSGRPKMGELLQSEFL 364 (720)
Q Consensus 349 P~~Rpta~eiL~hp~~ 364 (720)
|++||++.++++||||
T Consensus 273 p~~Rps~~~il~~~~f 288 (288)
T cd07833 273 PKERLTCDELLQHPYF 288 (288)
T ss_pred chhcccHHHHhcCCCC
Confidence 9999999999999997
No 297
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=99.95 E-value=3.6e-28 Score=256.44 Aligned_cols=208 Identities=17% Similarity=0.236 Sum_probs=161.4
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..|..++..++||||+++++ .+... ...|+++|| .|++|.+++......+++..+..++.||+.||.|||+.||+
T Consensus 63 ~~e~~~l~~l~~~~i~~~~~-~~~~~---~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi~ 138 (286)
T cd06614 63 INEILIMKDCKHPNIVDYYD-SYLVG---DELWVVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVI 138 (286)
T ss_pred HHHHHHHHHCCCCCeeEEEE-EEEEC---CEEEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 35777899999999999999 44444 267999999 88999999966544699999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
|+||+|+||+++.++.++|+|||.+....... .
T Consensus 139 H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~---------------------------------~-------------- 171 (286)
T cd06614 139 HRDIKSDNILLSKDGSVKLADFGFAAQLTKEK---------------------------------S-------------- 171 (286)
T ss_pred eCCCChhhEEEcCCCCEEECccchhhhhccch---------------------------------h--------------
Confidence 99999999999999999999988763211000 0
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......+++.|+|||.+.+..++.++|||||||++|+
T Consensus 172 -------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~ 208 (286)
T cd06614 172 -------------------------------------------KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIE 208 (286)
T ss_pred -------------------------------------------hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHH
Confidence 0001356889999999988889999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCCCCccc-cccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 304 LFC---PFSTGEEKTRTMSSLRHRVLPPQL-LLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~~~p~~~-~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|++ ||....... .+..+.....++.. ...++ ...+|+.+||+.+|.+||++.+++.|+||...
T Consensus 209 l~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~ 276 (286)
T cd06614 209 MAEGEPPYLREPPLR-ALFLITTKGIPPLKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQHPFLKKA 276 (286)
T ss_pred HHhCCCCCCCCCHHH-HHHHHHhcCCCCCcchhhCCHHHHHHHHHHhccChhhCcCHHHHhhChHhhcc
Confidence 999 555443332 22223222222221 12133 34599999999999999999999999999984
No 298
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=99.95 E-value=4.9e-28 Score=251.73 Aligned_cols=201 Identities=15% Similarity=0.145 Sum_probs=154.3
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
+|..++.+++||||+++++ ++.... .+|++||| .+++|.+++... +..+++..+..++.||+.||.|||+.||+
T Consensus 50 ~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~ 125 (261)
T cd05068 50 AEAQIMKKLRHPKLIQLYA-VCTLEE---PIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYI 125 (261)
T ss_pred HHHHHHHHCCCCCccceeE-EEecCC---CeeeeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 5777999999999999999 554443 57999999 799999999543 34689999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+||+++.++.++|+|||.+...+..... ..
T Consensus 126 H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~------------------------------~~-------------- 161 (261)
T cd05068 126 HRDLAARNVLVGENNICKVADFGLARVIKEDIYE------------------------------AR-------------- 161 (261)
T ss_pred eccCCcceEEEcCCCCEEECCcceEEEccCCccc------------------------------cc--------------
Confidence 9999999999999999999999887443211000 00
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
.| ...+..|+|||.+.+..++.++|||||||++||
T Consensus 162 --------------------------~~-------------------~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~e 196 (261)
T cd05068 162 --------------------------EG-------------------AKFPIKWTAPEAALYNRFSIKSDVWSFGILLTE 196 (261)
T ss_pred --------------------------CC-------------------CcCceeccCccccccCCCCchhhHHHHHHHHHH
Confidence 00 122457999999988889999999999999999
Q ss_pred ccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 304 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 304 Llt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|++ ||...... .....+......+..........+++.+||+.+|.+||++.++++
T Consensus 197 l~t~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~ 256 (261)
T cd05068 197 IVTYGRMPYPGMTNA-EVLQQVDQGYRMPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQW 256 (261)
T ss_pred HHhcCCCCCCCCCHH-HHHHHHHcCCCCCCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence 998 56554433 333444333222222223345569999999999999999999875
No 299
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=99.95 E-value=4.4e-28 Score=253.12 Aligned_cols=205 Identities=15% Similarity=0.162 Sum_probs=155.8
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
...|..+|.+++||||+++++ ++..+. .+|++||| .+++|.+++......+++.+++.++.||+.||.|||++|+
T Consensus 52 ~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i 127 (267)
T cd05066 52 FLSEASIMGQFDHPNIIHLEG-VVTKSK---PVMIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGY 127 (267)
T ss_pred HHHHHHHHHhCCCCCcceEEE-EEecCC---ccEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence 346777899999999999999 454433 57999999 8899999996655568999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.++++|||.+.........
T Consensus 128 ~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~--------------------------------------------- 162 (267)
T cd05066 128 VHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEA--------------------------------------------- 162 (267)
T ss_pred eehhhchhcEEECCCCeEEeCCCCcccccccccce---------------------------------------------
Confidence 99999999999999999999999887433111000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
.. ......++..|+|||.+.+..++.++|||||||++|
T Consensus 163 -----------------------~~-------------------~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ 200 (267)
T cd05066 163 -----------------------AY-------------------TTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMW 200 (267)
T ss_pred -----------------------ee-------------------ecCCCccceeecCHhHhccCccCchhhhHHHHHHHH
Confidence 00 000013356899999999888999999999999999
Q ss_pred hccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 303 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 303 eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
||++ ||...... .....+.+...++......+...+|+.+||+++|.+||++.++++
T Consensus 201 ell~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 261 (267)
T cd05066 201 EVMSYGERPYWEMSNQ-DVIKAIEEGYRLPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVS 261 (267)
T ss_pred HHhcCCCCCcccCCHH-HHHHHHhCCCcCCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHH
Confidence 9885 55443332 233334443323332223345569999999999999999999975
No 300
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.95 E-value=2.9e-28 Score=263.81 Aligned_cols=216 Identities=18% Similarity=0.205 Sum_probs=157.5
Q ss_pred eehhhhcccC-CCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..+++++ +||||+++++ ++... ....+|+||||.+++|.+++... .+++..++.++.||+.||.|||+.||+
T Consensus 54 ~~E~~~l~~l~~h~ni~~~~~-~~~~~-~~~~~~lv~e~~~~~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~LH~~~i~ 129 (337)
T cd07852 54 FREIMFLQELGDHPNIVKLLN-VIKAE-NDKDIYLVFEYMETDLHAVIRAN--ILEDVHKRYIMYQLLKALKYIHSGNVI 129 (337)
T ss_pred hHHHHHHHHhcCCCCccceee-eeccC-CCceEEEEecccccCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 3678899999 9999999999 44332 22357999999667999999554 589999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+||+++.++.++|+|||.+......... .
T Consensus 130 H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~~~--------------------------------~------------- 164 (337)
T cd07852 130 HRDLKPSNILLNSDCRVKLADFGLARSLSELEEN--------------------------------P------------- 164 (337)
T ss_pred cCCCCHHHEEEcCCCcEEEeeccchhcccccccc--------------------------------c-------------
Confidence 9999999999999999999999887432111000 0
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-CCCccccchhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLF 302 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGvll~ 302 (720)
..+ ......||++|+|||++.+. .++.++|||||||++|
T Consensus 165 ---------------------------------------~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~ 204 (337)
T cd07852 165 ---------------------------------------ENP-VLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILG 204 (337)
T ss_pred ---------------------------------------cCc-chhcccccccccCceeeeccccccccchHHHHHHHHH
Confidence 000 00114689999999988654 4789999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhh--------------------------cCC--CCcccccc-CchHHHHHHHcCCCCCC
Q 004998 303 ELFC---PFSTGEEKTRTMSSLR--------------------------HRV--LPPQLLLK-FPKEASFCLWLLHPEPS 350 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~--------------------------~~~--~p~~~~~~-~p~~~~li~~~L~~dP~ 350 (720)
+|++ ||.............. ... ........ .+...+||.+||+.+|+
T Consensus 205 el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~ 284 (337)
T cd07852 205 EMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPN 284 (337)
T ss_pred HHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcc
Confidence 9999 5544322211111000 000 00111112 23445999999999999
Q ss_pred CCCChHHHHcCcccCCCcc
Q 004998 351 GRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 351 ~Rpta~eiL~hp~~~~~~~ 369 (720)
+|||+.++++||||.....
T Consensus 285 ~Rps~~~il~~~~~~~~~~ 303 (337)
T cd07852 285 KRLTAEEALEHPYVAQFHN 303 (337)
T ss_pred cccCHHHHhhChhhhhhcc
Confidence 9999999999999988644
No 301
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=99.95 E-value=4e-28 Score=257.03 Aligned_cols=202 Identities=16% Similarity=0.163 Sum_probs=151.5
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC----------CCCCHHHHHHHHHHHHHHH
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK----------RSVDVYECLHIFRQIVEIV 134 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~----------~~l~~~~~~~i~~QIl~aL 134 (720)
+|..++.+++||||+++++ ++..+. .++++||| .+++|.++|.... ..+++..++.++.||+.||
T Consensus 68 ~e~~~l~~l~~~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al 143 (296)
T cd05051 68 KEVKILSRLSDPNIARLLG-VCTVDP---PLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGM 143 (296)
T ss_pred HHHHHHHhcCCCCEeEEEE-EEecCC---CcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHH
Confidence 6778999999999999999 554442 67999999 8999999995433 2589999999999999999
Q ss_pred HHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccccccccccc
Q 004998 135 YAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVT 214 (720)
Q Consensus 135 ~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~ 214 (720)
.|||+.||+||||||+||+++.++.++|+|||.+....... .+.
T Consensus 144 ~~LH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~---------------------------------~~~--- 187 (296)
T cd05051 144 RYLESLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSSD---------------------------------YYR--- 187 (296)
T ss_pred HHHHHcCccccccchhceeecCCCceEEccccceeecccCc---------------------------------cee---
Confidence 99999999999999999999999999999998774321110 000
Q ss_pred CCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccc
Q 004998 215 APTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDI 294 (720)
Q Consensus 215 ~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDI 294 (720)
......+++.|+|||.+.+..++.++||
T Consensus 188 ----------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv 215 (296)
T cd05051 188 ----------------------------------------------------VQGRAPLPIRWMAWESVLLGKFTTKSDV 215 (296)
T ss_pred ----------------------------------------------------ecCcCCCCceecCHHHhhcCCCCccchh
Confidence 0001345788999999988889999999
Q ss_pred hhhhhhhhhccc-----cCCCCchHHHHHHHhhcC-------CCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 295 YRLGVLLFELFC-----PFSTGEEKTRTMSSLRHR-------VLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 295 wSLGvll~eLlt-----pf~~~~~~~~~~~~l~~~-------~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||||++|||++ ||...... ..+..+... ...+......+...+|+.+||+.||.+|||+.||++
T Consensus 216 ~slG~~l~el~~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~ 292 (296)
T cd05051 216 WAFGVTLWEILTLCREQPYEHLTDQ-QVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHL 292 (296)
T ss_pred hhhHHHHHHHHhcCCCCCCCCcChH-HHHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHH
Confidence 999999999987 44433222 222222211 111111112234569999999999999999999975
No 302
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=99.95 E-value=3.3e-28 Score=269.43 Aligned_cols=203 Identities=17% Similarity=0.188 Sum_probs=154.3
Q ss_pred eehhhhcccCC-CCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC----------------------------
Q 004998 65 HSDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---------------------------- 114 (720)
Q Consensus 65 ~~e~~~Ls~l~-HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~---------------------------- 114 (720)
.+|..+|+++. |||||++++ ++.... .+|+|||| .+++|.++|.+.
T Consensus 88 ~~Ei~~l~~l~~HpnIv~l~~-~~~~~~---~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (400)
T cd05105 88 MSELKIMTHLGPHLNIVNLLG-ACTKSG---PIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADEST 163 (400)
T ss_pred HHHHHHHHhcCCCCCeeeEEE-EEccCC---ceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccc
Confidence 36778999996 999999999 554443 57999999 999999998431
Q ss_pred -------------------------------------------------------------------CCCCCHHHHHHHH
Q 004998 115 -------------------------------------------------------------------KRSVDVYECLHIF 127 (720)
Q Consensus 115 -------------------------------------------------------------------~~~l~~~~~~~i~ 127 (720)
...+++.++..++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~ 243 (400)
T cd05105 164 RSYVILSFENKGDYMDMKQADTTQYVPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFT 243 (400)
T ss_pred cchhhhhhcccccccccccccccccchhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHH
Confidence 1237788899999
Q ss_pred HHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccc
Q 004998 128 RQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRR 207 (720)
Q Consensus 128 ~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l 207 (720)
.||+.||.|||+.||+||||||+|||++.++.+||+|||++........
T Consensus 244 ~qi~~aL~~LH~~~ivH~dikp~Nill~~~~~~kL~DfGla~~~~~~~~------------------------------- 292 (400)
T cd05105 244 YQVARGMEFLASKNCVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSN------------------------------- 292 (400)
T ss_pred HHHHHHHHHHHhCCeeCCCCChHhEEEeCCCEEEEEeCCcceecccccc-------------------------------
Confidence 9999999999999999999999999999999999999988743211100
Q ss_pred cccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC
Q 004998 208 EDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP 287 (720)
Q Consensus 208 ~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~ 287 (720)
. .......+++.|+|||.+.+..
T Consensus 293 --~-------------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~ 315 (400)
T cd05105 293 --Y-------------------------------------------------------VSKGSTFLPVKWMAPESIFDNL 315 (400)
T ss_pred --c-------------------------------------------------------cccCCcCCCcceEChhhhcCCC
Confidence 0 0000124678899999998888
Q ss_pred CCccccchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 288 VSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 288 ~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
++.++|||||||++|||++ ||............+.....++ ....+| ...+|+.+||..||++||++.++.+
T Consensus 316 ~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 392 (400)
T cd05105 316 YTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFYNKIKSGYRMA-KPDHATQEVYDIMVKCWNSEPEKRPSFLHLSD 392 (400)
T ss_pred CCchhhHHHHHHHHHHHHHCCCCCCcccchhHHHHHHHhcCCCCC-CCccCCHHHHHHHHHHCccCHhHCcCHHHHHH
Confidence 9999999999999999985 5554433333344444443332 223344 4469999999999999999998875
No 303
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=99.95 E-value=4.4e-28 Score=255.23 Aligned_cols=202 Identities=17% Similarity=0.162 Sum_probs=153.4
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC--------------CCCCHHHHHHHHHHH
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK--------------RSVDVYECLHIFRQI 130 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~--------------~~l~~~~~~~i~~QI 130 (720)
+|..+++.++||||+++++ ++.... ..+++||| .+++|.+++.... ..+++..++.++.||
T Consensus 56 ~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi 131 (280)
T cd05092 56 REAELLTVLQHQHIVRFYG-VCTEGR---PLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQI 131 (280)
T ss_pred HHHHHHhcCCCCCCceEEE-EEecCC---ceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHH
Confidence 5677899999999999999 554443 57999999 8999999995432 247899999999999
Q ss_pred HHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccccccc
Q 004998 131 VEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDL 210 (720)
Q Consensus 131 l~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Df 210 (720)
+.||.|||++||+||||||+|||++.++.++|+|||++...... ++
T Consensus 132 ~~al~~LH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~----------------------------------~~ 177 (280)
T cd05092 132 ASGMVYLASLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYST----------------------------------DY 177 (280)
T ss_pred HHHHHHHHHCCeecccccHhhEEEcCCCCEEECCCCceeEcCCC----------------------------------ce
Confidence 99999999999999999999999999999999998877322110 00
Q ss_pred ccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCc
Q 004998 211 QLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSC 290 (720)
Q Consensus 211 gla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~ 290 (720)
.. ......+++.|+|||.+.+..++.
T Consensus 178 ----------------------------------~~--------------------~~~~~~~~~~y~aPE~~~~~~~~~ 203 (280)
T cd05092 178 ----------------------------------YR--------------------VGGRTMLPIRWMPPESILYRKFTT 203 (280)
T ss_pred ----------------------------------ee--------------------cCCCccccccccCHHHhccCCcCc
Confidence 00 000123567899999999888999
Q ss_pred cccchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 291 ASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 291 ~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
++|||||||++|||++ ||...... .....+..+..+.......+...+|+.+||+.||.+||++.+|++
T Consensus 204 ~~Di~slG~il~el~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~ 276 (280)
T cd05092 204 ESDIWSFGVVLWEIFTYGKQPWYQLSNT-EAIECITQGRELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHS 276 (280)
T ss_pred hhhHHHHHHHHHHHHcCCCCCCccCCHH-HHHHHHHcCccCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 9999999999999997 44433333 233333333332222233355669999999999999999999975
No 304
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=99.95 E-value=1.9e-28 Score=258.07 Aligned_cols=204 Identities=20% Similarity=0.270 Sum_probs=151.4
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
+|..++..++||||+++++ ++..+. .+|++||| .+++|.+++... ..+++..++.++.||+.||.|||+.||+|
T Consensus 49 ~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~i~h 123 (286)
T cd07846 49 REIRMLKQLRHENLVNLIE-VFRRKK---RLYLVFEFVDHTVLDDLEKYP-NGLDESRVRKYLFQILRGIEFCHSHNIIH 123 (286)
T ss_pred HHHHHHHhcCCcchhhHHH-hcccCC---eEEEEEecCCccHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 5777899999999999999 444433 67999999 777888776443 34899999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
+||+|+||++++++.++|+|||++....... .
T Consensus 124 ~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~--------------------------------~---------------- 155 (286)
T cd07846 124 RDIKPENILVSQSGVVKLCDFGFARTLAAPG--------------------------------E---------------- 155 (286)
T ss_pred cCCCHHHEEECCCCcEEEEeeeeeeeccCCc--------------------------------c----------------
Confidence 9999999999999999999988773221100 0
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC-CCccccchhhhhhhhh
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFE 303 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGvll~e 303 (720)
......++.+|+|||.+.+.. ++.++|||||||++||
T Consensus 156 ------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~e 193 (286)
T cd07846 156 ------------------------------------------VYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTE 193 (286)
T ss_pred ------------------------------------------ccCcccceeeccCcHHhccccccCchHhHHHHHHHHHH
Confidence 000135788999999987644 7889999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhh--c------------------CCCCc---------cccccCchHHHHHHHcCCCCCCC
Q 004998 304 LFC---PFSTGEEKTRTMSSLR--H------------------RVLPP---------QLLLKFPKEASFCLWLLHPEPSG 351 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~--~------------------~~~p~---------~~~~~~p~~~~li~~~L~~dP~~ 351 (720)
|++ ||.............. . ...+. ......+...+|+.+||+++|.+
T Consensus 194 l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~ 273 (286)
T cd07846 194 MLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDD 273 (286)
T ss_pred HHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCccc
Confidence 999 4443322111111000 0 00000 00111234459999999999999
Q ss_pred CCChHHHHcCccc
Q 004998 352 RPKMGELLQSEFL 364 (720)
Q Consensus 352 Rpta~eiL~hp~~ 364 (720)
||++.++++||||
T Consensus 274 Rp~~~~il~~~~~ 286 (286)
T cd07846 274 RPSSSQLLHHEFF 286 (286)
T ss_pred chhHHHHhcCCCC
Confidence 9999999999997
No 305
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=99.95 E-value=4.9e-28 Score=251.86 Aligned_cols=204 Identities=20% Similarity=0.256 Sum_probs=158.4
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC---CCCCCCHHHHHHHHHHHHHHHHHHH
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~---~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
+..+|..++.+++|+||+++++ .+.... .++++||| .+++|.+++.. ....+++..++.++.||+.||.|||
T Consensus 48 ~~~~ei~~l~~~~~~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh 123 (267)
T cd08224 48 DCLKEIDLLKQLDHPNVIKYLA-SFIENN---ELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMH 123 (267)
T ss_pred HHHHHHHHHHhCCCCCeeeeee-eeecCC---eEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHH
Confidence 3446778999999999999999 444432 57999999 88999999842 3445899999999999999999999
Q ss_pred HcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCC
Q 004998 139 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
+.||+||||||+||+++.++.++++|||.+........
T Consensus 124 ~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~------------------------------------------ 161 (267)
T cd08224 124 SKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT------------------------------------------ 161 (267)
T ss_pred hCCEecCCcChhhEEECCCCcEEEeccceeeeccCCCc------------------------------------------
Confidence 99999999999999999999999999887632211000
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhh
Q 004998 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
......|++.|+|||.+.+..++.++||||||
T Consensus 162 ------------------------------------------------~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG 193 (267)
T cd08224 162 ------------------------------------------------AAHSLVGTPYYMSPERIHENGYNFKSDIWSLG 193 (267)
T ss_pred ------------------------------------------------ccceecCCccccCHHHhccCCCCchhcHHHHH
Confidence 00013568899999999888899999999999
Q ss_pred hhhhhccc---cCCCCc-hHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 299 VLLFELFC---PFSTGE-EKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 299 vll~eLlt---pf~~~~-~~~~~~~~l~~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|++|+|++ ||.... ........+..+..++......+ ...+++.+||.++|++|||+.+|++
T Consensus 194 ~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~ 260 (267)
T cd08224 194 CLLYEMAALQSPFYGDKMNLYSLCKKIEKCDYPPLPADHYSEELRDLVSRCINPDPEKRPDISYVLQ 260 (267)
T ss_pred HHHHHHHHCCCCcccCCccHHHHHhhhhcCCCCCCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 99999999 554332 22334445555555554432333 4559999999999999999999885
No 306
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=99.95 E-value=6e-28 Score=253.04 Aligned_cols=202 Identities=13% Similarity=0.110 Sum_probs=153.7
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC---------CCCCCHHHHHHHHHHHHHHHH
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---------KRSVDVYECLHIFRQIVEIVY 135 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~---------~~~l~~~~~~~i~~QIl~aL~ 135 (720)
+|..+|..++||||+++++ ++... ...|++||| .+++|.+++... ...+++..++.++.||+.||.
T Consensus 58 ~e~~~l~~~~~~~i~~~~~-~~~~~---~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~ 133 (277)
T cd05032 58 NEASVMKEFNCHHVVRLLG-VVSTG---QPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMA 133 (277)
T ss_pred HHHHHHHhCCCCceeEEEE-EEcCC---CCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHH
Confidence 6777899999999999999 44444 357999999 889999999432 123688899999999999999
Q ss_pred HHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccC
Q 004998 136 AAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTA 215 (720)
Q Consensus 136 yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~ 215 (720)
|||+.||+||||||+||+++.++.++|+|||.++..... ++ .
T Consensus 134 ~lH~~~i~H~di~p~nill~~~~~~kl~dfg~~~~~~~~----------------------------------~~--~-- 175 (277)
T cd05032 134 YLAAKKFVHRDLAARNCMVAEDLTVKIGDFGMTRDIYET----------------------------------DY--Y-- 175 (277)
T ss_pred HHHhCCccccccChheEEEcCCCCEEECCcccchhhccC----------------------------------cc--c--
Confidence 999999999999999999999999999998877432111 00 0
Q ss_pred CCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccch
Q 004998 216 PTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIY 295 (720)
Q Consensus 216 ~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIw 295 (720)
.......++..|+|||.+.+..++.++|||
T Consensus 176 --------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~ 205 (277)
T cd05032 176 --------------------------------------------------RKGGKGLLPVRWMAPESLKDGVFTTKSDVW 205 (277)
T ss_pred --------------------------------------------------ccCCCCCccccccCHHHHhcCCCCcccchH
Confidence 000012457789999999888899999999
Q ss_pred hhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 296 RLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 296 SLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
||||++|||++ ||..... ......+.....++......+...+|+.+||.++|++|||+.++++
T Consensus 206 slG~il~el~t~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 273 (277)
T cd05032 206 SFGVVLWEMATLAEQPYQGLSN-EEVLKFVIDGGHLDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVS 273 (277)
T ss_pred HHHHHHHHhhccCCCCCccCCH-HHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 99999999997 5654333 2344444433332222222344459999999999999999999986
No 307
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.95 E-value=2.9e-28 Score=255.88 Aligned_cols=208 Identities=20% Similarity=0.289 Sum_probs=157.1
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
+...|..+|++++||||+++++ ++.++ ..++++|||.+++|.+++......+++..++.++.||+.||.|||++||
T Consensus 44 ~~~~e~~~l~~l~~~~i~~~~~-~~~~~---~~~~~v~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i 119 (283)
T cd05118 44 TALREIKLLKELNHPNIIKLLD-VFRHK---GDLYLVFEFMDTDLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGI 119 (283)
T ss_pred HHHHHHHHHHHhcCCCcchHHH-hhccC---CCEEEEEeccCCCHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 3446778899999999999999 44444 3689999996679999996655669999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+|+||||+||+++.++.++|+|||.+...+....
T Consensus 120 ~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~---------------------------------------------- 153 (283)
T cd05118 120 LHRDLKPENLLINTEGVLKLADFGLARSFGSPVR---------------------------------------------- 153 (283)
T ss_pred eecCcCHHHEEECCCCcEEEeeeeeeEecCCCcc----------------------------------------------
Confidence 9999999999999999999999987733221100
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-CCCccccchhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLL 301 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGvll 301 (720)
......++.+|+|||.+.+. .++.++|||||||++
T Consensus 154 --------------------------------------------~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l 189 (283)
T cd05118 154 --------------------------------------------PYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIF 189 (283)
T ss_pred --------------------------------------------cccCccCcccccCcHHHhcCCCCCchhHHHHHHHHH
Confidence 00013568899999999877 589999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCC--C-------------------------ccccc-cCchHHHHHHHcCCCCCC
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRHRVL--P-------------------------PQLLL-KFPKEASFCLWLLHPEPS 350 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~--p-------------------------~~~~~-~~p~~~~li~~~L~~dP~ 350 (720)
|+|++ ||...+.............. + +.... ...+..+||.+||++||.
T Consensus 190 ~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~ 269 (283)
T cd05118 190 AELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPH 269 (283)
T ss_pred HHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcc
Confidence 99999 55443332211111110000 0 00111 123445999999999999
Q ss_pred CCCChHHHHcCccc
Q 004998 351 GRPKMGELLQSEFL 364 (720)
Q Consensus 351 ~Rpta~eiL~hp~~ 364 (720)
+||++.+++.||||
T Consensus 270 ~Rp~~~~ll~~~~~ 283 (283)
T cd05118 270 KRITAEQALAHPYF 283 (283)
T ss_pred cCcCHHHHhhCCCC
Confidence 99999999999997
No 308
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=99.95 E-value=5.5e-28 Score=251.25 Aligned_cols=201 Identities=13% Similarity=0.129 Sum_probs=153.1
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
.+|..++.+++||||+++++ ++... ..|++||| .+++|.+++.. ....+++..++.++.||+.||.|||++||
T Consensus 49 ~~E~~~l~~l~~~~i~~~~~-~~~~~----~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i 123 (260)
T cd05070 49 LEEAQIMKKLRHDKLVQLYA-VVSEE----PIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNY 123 (260)
T ss_pred HHHHHHHHhcCCCceEEEEe-EECCC----CcEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 36777999999999999998 44332 36899999 88999999954 33458999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.++|+|||.+.........
T Consensus 124 ~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~--------------------------------------------- 158 (260)
T cd05070 124 IHRDLRSANILVGDGLVCKIADFGLARLIEDNEYT--------------------------------------------- 158 (260)
T ss_pred ccCCCccceEEEeCCceEEeCCceeeeeccCcccc---------------------------------------------
Confidence 99999999999999999999988887332111000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......++..|+|||.+.+..++.++|||||||++|
T Consensus 159 --------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ 194 (260)
T cd05070 159 --------------------------------------------ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLT 194 (260)
T ss_pred --------------------------------------------cccCCCCCccccChHHHhcCCCcchhhhHHHHHHHH
Confidence 000023466799999998888999999999999999
Q ss_pred hccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 303 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 303 eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
||++ ||...... .....+.....++..........+|+.+||.++|++|||+++++.
T Consensus 195 ~l~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 255 (260)
T cd05070 195 ELVTKGRVPYPGMNNR-EVLEQVERGYRMPCPQDCPISLHELMLQCWKKDPEERPTFEYLQS 255 (260)
T ss_pred HHHhcCCCCCCCCCHH-HHHHHHHcCCCCCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence 9997 45443332 344444443333322223344559999999999999999999864
No 309
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.95 E-value=4.4e-28 Score=251.78 Aligned_cols=205 Identities=20% Similarity=0.268 Sum_probs=157.4
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHh---CCCCCCCHHHHHHHHHHHHHHHHHHH
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLD---KPKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~---~~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
+..+|..++.+++||||+++++ .+.+.. ..+++||| .+++|.+++. .....+++.+++.++.||+.||.|||
T Consensus 48 ~~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH 123 (260)
T cd08222 48 QANQEAQLLSKLDHPAIVKFHA-SFLERD---AFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMH 123 (260)
T ss_pred HHHHHHHHHHhCCCCcHHHHHH-HHhcCC---ceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHH
Confidence 3446777899999999999999 443333 57999999 8899999884 23456899999999999999999999
Q ss_pred HcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCC
Q 004998 139 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
+.|++|+||||+||+++. +.++++|||.+...... .+.
T Consensus 124 ~~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~~---------------------------------~~~-------- 161 (260)
T cd08222 124 QRRILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMGS---------------------------------CDL-------- 161 (260)
T ss_pred HcCccccCCChhheEeec-CCEeecccCceeecCCC---------------------------------ccc--------
Confidence 999999999999999974 67999988876332100 000
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhh
Q 004998 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
.....|++.|+|||.+.+..++.++|+||||
T Consensus 162 -------------------------------------------------~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG 192 (260)
T cd08222 162 -------------------------------------------------ATTFTGTPYYMSPEALKHQGYDSKSDIWSLG 192 (260)
T ss_pred -------------------------------------------------ccCCCCCcCccCHHHHccCCCCchhhHHHHH
Confidence 0013468889999999888889999999999
Q ss_pred hhhhhccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004998 299 VLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
+++|+|++ ||...... .....+..+..+. +...+ +...+++.+||..+|++||++.++++||||
T Consensus 193 ~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 260 (260)
T cd08222 193 CILYEMCCLAHAFEGQNFL-SVVLRIVEGPTPS-LPETYSRQLNSIMQSMLNKDPSLRPSAAEILRNPFI 260 (260)
T ss_pred HHHHHHHhCCCCCCCccHH-HHHHHHHcCCCCC-CcchhcHHHHHHHHHHhcCChhhCcCHHHHhhCCCC
Confidence 99999998 66544333 3333333333333 23333 345599999999999999999999999997
No 310
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=99.95 E-value=5.7e-28 Score=250.23 Aligned_cols=196 Identities=17% Similarity=0.140 Sum_probs=150.2
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.|..++.+++||||+++++ ++... ..+++||| .+++|.+++... ...+++..++.++.||+.||.|||+.|++
T Consensus 48 ~e~~~l~~~~~~~i~~~~~-~~~~~----~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ 122 (254)
T cd05083 48 EETAVMTKLHHKNLVRLLG-VILHN----GLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLV 122 (254)
T ss_pred HHHHHHHhCCCCCcCeEEE-EEcCC----CcEEEEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 5677899999999999999 44332 25899999 889999999543 33589999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+||+++.++.++|+|||.+...... .
T Consensus 123 H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~-------------------------------------~----------- 154 (254)
T cd05083 123 HRDLAARNILVSEDGVAKVSDFGLARVGSMG-------------------------------------V----------- 154 (254)
T ss_pred ccccCcceEEEcCCCcEEECCCccceecccc-------------------------------------C-----------
Confidence 9999999999999999999988876321000 0
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
.....+..|+|||.+.+..++.++|||||||++||
T Consensus 155 ---------------------------------------------~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~e 189 (254)
T cd05083 155 ---------------------------------------------DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWE 189 (254)
T ss_pred ---------------------------------------------CCCCCCceecCHHHhccCCcCchhhHHHHHHHHHH
Confidence 00122457999999988889999999999999999
Q ss_pred ccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 304 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 304 Llt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|++ ||...... .....+..+..++......+...+|+.+||..+|..||++.+++.
T Consensus 190 l~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 249 (254)
T cd05083 190 VFSYGRAPYPKMSLK-EVKECVEKGYRMEPPEGCPADVYVLMTSCWETEPKKRPSFHKLRE 249 (254)
T ss_pred HHhCCCCCCccCCHH-HHHHHHhCCCCCCCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 986 55544332 233333333222222222234459999999999999999999975
No 311
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=99.95 E-value=6.3e-28 Score=252.22 Aligned_cols=202 Identities=19% Similarity=0.167 Sum_probs=155.5
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
...|..++.+++||||+++++ ++.+. ..|++||| .+++|.+++.+....+++..++.++.||+.||+|||+.|+
T Consensus 54 ~~~e~~~l~~~~h~~i~~~~~-~~~~~----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~ 128 (270)
T cd05056 54 FLQEAYIMRQFDHPHIVKLIG-VITEN----PVWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRF 128 (270)
T ss_pred HHHHHHHHHhCCCCchhceeE-EEcCC----CcEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 346778999999999999999 55443 46899999 8999999996655568999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+|+||||+||+++.++.++++|||.+....... +
T Consensus 129 ~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~----------------------------------~------------ 162 (270)
T cd05056 129 VHRDIAARNVLVSSPDCVKLGDFGLSRYLEDES----------------------------------Y------------ 162 (270)
T ss_pred eccccChheEEEecCCCeEEccCceeeeccccc----------------------------------c------------
Confidence 999999999999999999999888763221000 0
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
. ......++..|+|||.+....++.++|||||||++|
T Consensus 163 ------------------------~-------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ 199 (270)
T cd05056 163 ------------------------Y-------------------KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMW 199 (270)
T ss_pred ------------------------e-------------------ecCCCCccccccChhhhccCCCCchhhhHHHHHHHH
Confidence 0 000012456799999998888999999999999999
Q ss_pred hccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 303 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 303 eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
||++ ||...... .....+..+..++......+...+|+.+||.++|.+|||+.+++.
T Consensus 200 el~~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~ 260 (270)
T cd05056 200 EILMLGVKPFQGVKNN-DVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKA 260 (270)
T ss_pred HHHHcCCCCCCCCCHH-HHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 9886 67655443 233344443333322222345559999999999999999999885
No 312
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=99.95 E-value=7.6e-28 Score=251.16 Aligned_cols=204 Identities=13% Similarity=0.159 Sum_probs=156.3
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..|..++.+++||||+++++ ++.... ..|++||| .+++|.+++......+++..+..++.|++.||+|||+.||+
T Consensus 54 ~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~ 129 (268)
T cd05063 54 LSEASIMGQFSHHNIIRLEG-VVTKFK---PAMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYV 129 (268)
T ss_pred HHHHHHHhcCCCCCeeEEEE-EEccCC---CcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 36777899999999999999 554443 57999999 89999999966556689999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
|+||||+||+++.++.++++|||++........ ..+
T Consensus 130 H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~-------------------------------~~~------------- 165 (268)
T cd05063 130 HRDLAARNILVNSNLECKVSDFGLSRVLEDDPE-------------------------------GTY------------- 165 (268)
T ss_pred ccccchhhEEEcCCCcEEECCCccceecccccc-------------------------------cce-------------
Confidence 999999999999999999999988743211000 000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
.......++.|+|||++.+..++.++|||||||++||
T Consensus 166 -------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~e 202 (268)
T cd05063 166 -------------------------------------------TTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWE 202 (268)
T ss_pred -------------------------------------------eccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHH
Confidence 0000123567999999988889999999999999999
Q ss_pred ccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 304 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 304 Llt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|++ ||..... ......+......+......+...+|+.+||..+|.+||++.++++
T Consensus 203 ll~~g~~p~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~ 262 (268)
T cd05063 203 VMSFGERPYWDMSN-HEVMKAINDGFRLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVN 262 (268)
T ss_pred HHhCCCCCCCcCCH-HHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 886 5544333 2344444444333333333445569999999999999999999985
No 313
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=99.95 E-value=3.3e-28 Score=255.61 Aligned_cols=205 Identities=20% Similarity=0.270 Sum_probs=159.8
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..++++++||||+++++ .+..+. .+|+|||| .+++|.+++... .+++..+..++.||+.||.|||+.|++
T Consensus 50 ~~e~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~l~~~i~~~--~~~~~~~~~~~~~l~~~l~~lh~~~i~ 123 (277)
T cd06641 50 QQEITVLSQCDSPYVTKYYG-SYLKDT---KLWIIMEYLGGGSALDLLEPG--PLDETQIATILREILKGLDYLHSEKKI 123 (277)
T ss_pred HHHHHHHHhcCCCCEeEEEE-EEEeCC---eEEEEEEeCCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHccCCee
Confidence 36777899999999999999 454443 57999999 889999998543 489999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
|+||||+||+++.++.++++|||.+...... ++
T Consensus 124 h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~----------------------------------~~------------- 156 (277)
T cd06641 124 HRDIKAANVLLSEHGEVKLADFGVAGQLTDT----------------------------------QI------------- 156 (277)
T ss_pred cCCCCHHhEEECCCCCEEEeecccceecccc----------------------------------hh-------------
Confidence 9999999999999999999998876321100 00
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......|+..|+|||.+.+..++.++|+|||||++|+
T Consensus 157 -------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~ 193 (277)
T cd06641 157 -------------------------------------------KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIE 193 (277)
T ss_pred -------------------------------------------hhccccCCccccChhhhccCCCCchhhHHHHHHHHHH
Confidence 0001357889999999988888999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 304 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|++ ||...... .....+.... ++.+....+ ...+++.+||+.+|.+||++.++++||||...
T Consensus 194 l~~g~~p~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~~~~ 259 (277)
T cd06641 194 LAKGEPPHSELHPM-KVLFLIPKNN-PPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFIVRF 259 (277)
T ss_pred HHcCCCCCCccchH-HHHHHHhcCC-CCCCCcccCHHHHHHHHHHccCChhhCcCHHHHHhCHHHhhh
Confidence 999 44433322 2222232222 233333333 45599999999999999999999999999875
No 314
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.95 E-value=6.5e-28 Score=257.05 Aligned_cols=205 Identities=16% Similarity=0.172 Sum_probs=154.9
Q ss_pred eeeehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC---------------CCCCCHHHHHH
Q 004998 63 RKHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---------------KRSVDVYECLH 125 (720)
Q Consensus 63 r~~~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~---------------~~~l~~~~~~~ 125 (720)
+..+|..++..+ +||||+++++ ++.... .+|++||| .+++|.++|.+. ...++...++.
T Consensus 66 ~~~~E~~~l~~l~~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (304)
T cd05101 66 DLVSEMEMMKMIGKHKNIINLLG-ACTQDG---PLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVS 141 (304)
T ss_pred HHHHHHHHHHhhccCCCchheeE-EEecCC---ceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHH
Confidence 344777788888 8999999999 554443 57999999 889999999542 12478889999
Q ss_pred HHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcc
Q 004998 126 IFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRL 205 (720)
Q Consensus 126 i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 205 (720)
++.||+.||.|||++||+||||||+||+++.++.++|+|||.++.......
T Consensus 142 ~~~qi~~al~~LH~~givH~dlkp~Nili~~~~~~kl~D~g~~~~~~~~~~----------------------------- 192 (304)
T cd05101 142 CTYQVARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDVNNIDY----------------------------- 192 (304)
T ss_pred HHHHHHHHHHHHHHCCeeecccccceEEEcCCCcEEECCCccceecccccc-----------------------------
Confidence 999999999999999999999999999999999999999988743321100
Q ss_pred cccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC
Q 004998 206 RREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG 285 (720)
Q Consensus 206 ~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 285 (720)
.. ......+++.|+|||++.+
T Consensus 193 ----~~-------------------------------------------------------~~~~~~~~~~y~aPE~~~~ 213 (304)
T cd05101 193 ----YK-------------------------------------------------------KTTNGRLPVKWMAPEALFD 213 (304)
T ss_pred ----cc-------------------------------------------------------cccCCCCCceeeCchhhcc
Confidence 00 0000235678999999988
Q ss_pred CCCCccccchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 286 APVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 286 ~~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
..++.++|||||||++|||++ ||... ........+.....+...........+|+.+||+++|.+||++.|+++
T Consensus 214 ~~~~~~~Di~slG~~l~el~~~g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~ 291 (304)
T cd05101 214 RVYTHQSDVWSFGVLMWEIFTLGGSPYPGI-PVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVE 291 (304)
T ss_pred CCCCchhhHHHHHHHHHHHHcCCCCCcccC-CHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHH
Confidence 889999999999999999997 44433 233444444443322222223344559999999999999999999986
No 315
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.95 E-value=7.6e-28 Score=253.21 Aligned_cols=203 Identities=19% Similarity=0.193 Sum_probs=149.1
Q ss_pred cccCCCCCceecccceeecCC-CCCcEEEEEecCCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCC
Q 004998 71 LTHGDHLRNQGGLSGVCENEA-AIDPFVHAIEWGDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 148 (720)
Q Consensus 71 Ls~l~HpnIV~l~~~~~~~~~-~~~~~~lv~E~~ggsL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLK 148 (720)
+..++||||+++++.+...+. ....++++|||.+++|.+++... ...+++..++.++.||+.||.|||+.|++|+||+
T Consensus 55 l~~~~h~~i~~~~~~~~~~~~~~~~~~~l~~e~~~~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~ 134 (287)
T cd07838 55 LESFEHPNIVRLLDVCHGPRTDRELKLTLVFEHVDQDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLK 134 (287)
T ss_pred hhccCCCCcceEEEEEeeccCCCCceeEEEehhcccCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCC
Confidence 345579999999994443321 22348999999667899998543 3358999999999999999999999999999999
Q ss_pred CCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccC
Q 004998 149 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 228 (720)
Q Consensus 149 P~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~ 228 (720)
|+||+++.++.++|+|||.+........
T Consensus 135 ~~nili~~~~~~~l~dfg~~~~~~~~~~---------------------------------------------------- 162 (287)
T cd07838 135 PQNILVTSDGQVKIADFGLARIYSFEMA---------------------------------------------------- 162 (287)
T ss_pred hhhEEEccCCCEEEeccCcceeccCCcc----------------------------------------------------
Confidence 9999999999999999987733211100
Q ss_pred CCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhccc--
Q 004998 229 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 306 (720)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt-- 306 (720)
.....++..|+|||++.+..++.++|||||||++|||++
T Consensus 163 ---------------------------------------~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~ 203 (287)
T cd07838 163 ---------------------------------------LTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRR 203 (287)
T ss_pred ---------------------------------------cccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCC
Confidence 001246888999999998889999999999999999998
Q ss_pred -cCCCCchHHHHHHHhhcCC-----------------CCc----cc----cccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 307 -PFSTGEEKTRTMSSLRHRV-----------------LPP----QL----LLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 307 -pf~~~~~~~~~~~~l~~~~-----------------~p~----~~----~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
||............+.... ++. .+ ....+...+||.+||..||.+||++.++++
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~ 283 (287)
T cd07838 204 PLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ 283 (287)
T ss_pred CcccCCChHHHHHHHHHHcCCCChHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence 4444333222111111000 000 00 011233458999999999999999999999
Q ss_pred Cccc
Q 004998 361 SEFL 364 (720)
Q Consensus 361 hp~~ 364 (720)
||||
T Consensus 284 ~~~~ 287 (287)
T cd07838 284 HPYF 287 (287)
T ss_pred CcCC
Confidence 9997
No 316
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=99.95 E-value=5e-28 Score=255.61 Aligned_cols=204 Identities=15% Similarity=0.136 Sum_probs=155.1
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC---------------------CCCCCHH
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---------------------KRSVDVY 121 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~---------------------~~~l~~~ 121 (720)
..+|..++++++||||+++++ ++..+. ..+++||| .+++|.+++... ...+++.
T Consensus 55 ~~~ei~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 130 (288)
T cd05050 55 FQREAALMAEFDHPNIVKLLG-VCAVGK---PMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCT 130 (288)
T ss_pred HHHHHHHHHhcCCCchheEEE-EEcCCC---ccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHH
Confidence 336788999999999999999 555443 57999999 889999999532 1247888
Q ss_pred HHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhh
Q 004998 122 ECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQR 201 (720)
Q Consensus 122 ~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (720)
+++.++.||+.||.|||++|++||||||+||+++.++.++++|||.+........
T Consensus 131 ~~~~~~~~i~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~------------------------- 185 (288)
T cd05050 131 EQLCIAKQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADY------------------------- 185 (288)
T ss_pred HHHHHHHHHHHHHHHHHhCCeecccccHhheEecCCCceEECccccceecccCcc-------------------------
Confidence 9999999999999999999999999999999999999999999988743211100
Q ss_pred hhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCc
Q 004998 202 RTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPE 281 (720)
Q Consensus 202 r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE 281 (720)
+ . .......+..|+|||
T Consensus 186 --------~---~----------------------------------------------------~~~~~~~~~~y~aPE 202 (288)
T cd05050 186 --------Y---K----------------------------------------------------ASENDAIPIRWMPPE 202 (288)
T ss_pred --------c---c----------------------------------------------------ccCCCccChhhcCHH
Confidence 0 0 000012356799999
Q ss_pred cccCCCCCccccchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHH
Q 004998 282 ELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGE 357 (720)
Q Consensus 282 ~l~~~~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~e 357 (720)
.+.+..++.++|||||||++|||++ ||.+.... .....+.....++......+...+|+.+||..+|.+|||+.|
T Consensus 203 ~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~e 281 (288)
T cd05050 203 SIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHE-EVIYYVRDGNVLSCPDNCPLELYNLMRLCWSKLPSDRPSFAS 281 (288)
T ss_pred HHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH-HHHHHHhcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHH
Confidence 9988889999999999999999986 55544333 344444444433322223345669999999999999999999
Q ss_pred HHc
Q 004998 358 LLQ 360 (720)
Q Consensus 358 iL~ 360 (720)
+++
T Consensus 282 l~~ 284 (288)
T cd05050 282 INR 284 (288)
T ss_pred HHH
Confidence 875
No 317
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.95 E-value=5.7e-28 Score=255.92 Aligned_cols=209 Identities=19% Similarity=0.266 Sum_probs=155.2
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|..++++++||||+++++ ++.+.. ..|+||||.+++|.+++.. ....+++..++.++.||+.||.|||++||+|
T Consensus 50 ~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H 125 (294)
T PLN00009 50 REISLLKEMQHGNIVRLQD-VVHSEK---RLYLVFEYLDLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLH 125 (294)
T ss_pred HHHHHHHhccCCCEeeEEE-EEecCC---eEEEEEecccccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeC
Confidence 5778999999999999999 454443 6899999976789998844 3334688899999999999999999999999
Q ss_pred ccCCCCcEEEcc-CCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 145 HNVRPSCFVMSS-FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 145 rDLKP~NILl~~-~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
+||||+||+++. ++.+|++|||.+...+....
T Consensus 126 ~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~~----------------------------------------------- 158 (294)
T PLN00009 126 RDLKPQNLLIDRRTNALKLADFGLARAFGIPVR----------------------------------------------- 158 (294)
T ss_pred CCCCcceEEEECCCCEEEEcccccccccCCCcc-----------------------------------------------
Confidence 999999999985 55789999888743221100
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-CCCccccchhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLF 302 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGvll~ 302 (720)
......+++.|+|||.+.+. .++.++|||||||++|
T Consensus 159 -------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~ 195 (294)
T PLN00009 159 -------------------------------------------TFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFA 195 (294)
T ss_pred -------------------------------------------ccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHH
Confidence 00013568899999998764 4789999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhc--CC-----------------C---Ccc-----ccccCchHHHHHHHcCCCCCCCC
Q 004998 303 ELFC---PFSTGEEKTRTMSSLRH--RV-----------------L---PPQ-----LLLKFPKEASFCLWLLHPEPSGR 352 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~--~~-----------------~---p~~-----~~~~~p~~~~li~~~L~~dP~~R 352 (720)
+|++ ||............+.. .. . ++. .....+...+|+.+||+.+|++|
T Consensus 196 ~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R 275 (294)
T PLN00009 196 EMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKR 275 (294)
T ss_pred HHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhC
Confidence 9999 55544333222222110 00 0 000 01123445599999999999999
Q ss_pred CChHHHHcCcccCCCc
Q 004998 353 PKMGELLQSEFLNEPR 368 (720)
Q Consensus 353 pta~eiL~hp~~~~~~ 368 (720)
|++.++++||||....
T Consensus 276 ps~~~~l~~~~~~~~~ 291 (294)
T PLN00009 276 ITARAALEHEYFKDLG 291 (294)
T ss_pred cCHHHHhcCchHhHHh
Confidence 9999999999998763
No 318
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=1.4e-29 Score=268.03 Aligned_cols=224 Identities=16% Similarity=0.201 Sum_probs=182.1
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|..||...+.|.||++|. .|.+.. ++|+.||- .||.|...|+..+. +++..++.|+..+++|++|||++|||.
T Consensus 469 sEr~Im~~~~s~fIvrLYr-Tfrd~k---yvYmLmEaClGGElWTiLrdRg~-Fdd~tarF~~acv~EAfeYLH~k~iIY 543 (732)
T KOG0614|consen 469 SERNIMMECRSDFIVRLYR-TFRDSK---YVYMLMEACLGGELWTILRDRGS-FDDYTARFYVACVLEAFEYLHRKGIIY 543 (732)
T ss_pred hHHHHHHhcCchHHHHHHH-Hhccch---hhhhhHHhhcCchhhhhhhhcCC-cccchhhhhHHHHHHHHHHHHhcCcee
Confidence 4555788888999999999 454544 67999999 99999999976665 999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+|.+++.+|.+||.|||+|+..|...
T Consensus 544 RDLKPENllLd~~Gy~KLVDFGFAKki~~g~------------------------------------------------- 574 (732)
T KOG0614|consen 544 RDLKPENLLLDNRGYLKLVDFGFAKKIGSGR------------------------------------------------- 574 (732)
T ss_pred ccCChhheeeccCCceEEeehhhHHHhccCC-------------------------------------------------
Confidence 9999999999999999999999885543321
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhc
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 304 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eL 304 (720)
+.-..+|||.|.|||++.+...+.++|.||||+++|||
T Consensus 575 ------------------------------------------KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~EL 612 (732)
T KOG0614|consen 575 ------------------------------------------KTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYEL 612 (732)
T ss_pred ------------------------------------------ceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHH
Confidence 01126899999999999999999999999999999999
Q ss_pred cc---cCCCCchHHHHHHHhhcCCCCccccccCchHH-HHHHHcCCCCCCCCC-----ChHHHHcCcccCCC-ccchHHH
Q 004998 305 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEA-SFCLWLLHPEPSGRP-----KMGELLQSEFLNEP-RDSMEER 374 (720)
Q Consensus 305 lt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~-~li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~-~~~l~e~ 374 (720)
|+ ||.+.++. .++..|.+++-.-.++...++.+ +||+++...+|.+|. .+.+|-.|-||... +..+..+
T Consensus 613 L~G~pPFs~~dpm-ktYn~ILkGid~i~~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~gfdweglr~~ 691 (732)
T KOG0614|consen 613 LTGSPPFSGVDPM-KTYNLILKGIDKIEFPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHRWFEGFDWEGLRSR 691 (732)
T ss_pred HcCCCCCCCCchH-HHHHHHHhhhhhhhcccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhhhhhcCChhhhhhc
Confidence 99 77766554 56666666665555556666666 999999999999997 48999999999987 4445544
Q ss_pred HHHHHHhhhhhH
Q 004998 375 EAAIELREQIDE 386 (720)
Q Consensus 375 ~~~~~~~e~~~~ 386 (720)
...+++.....+
T Consensus 692 ~L~pPi~~~va~ 703 (732)
T KOG0614|consen 692 TLPPPIIPSVAN 703 (732)
T ss_pred cCCCCccccCCC
Confidence 445555554443
No 319
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=99.95 E-value=3.6e-28 Score=257.92 Aligned_cols=207 Identities=15% Similarity=0.199 Sum_probs=159.2
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..|..++..++||||+++++ .+.... ..|+|+|| .+++|.+++.+. .+++.++..++.||+.||.|||++|++
T Consensus 64 ~~e~~~l~~l~hp~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~--~l~~~~~~~i~~~l~~al~~LH~~gi~ 137 (293)
T cd06647 64 INEILVMRENKHPNIVNYLD-SYLVGD---ELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSNQVI 137 (293)
T ss_pred HHHHHHHhhcCCCCeeehhh-eeeeCC---cEEEEEecCCCCcHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCEe
Confidence 35677899999999999999 444433 57999999 899999999543 388999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
|+||||+||+++.++.++|+|||.+........
T Consensus 138 H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~----------------------------------------------- 170 (293)
T cd06647 138 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS----------------------------------------------- 170 (293)
T ss_pred eccCCHHHEEEcCCCCEEEccCcceeccccccc-----------------------------------------------
Confidence 999999999999999999999987732211000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......|++.|+|||.+.+..++.++|||||||++|+
T Consensus 171 -------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ 207 (293)
T cd06647 171 -------------------------------------------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIE 207 (293)
T ss_pred -------------------------------------------ccccccCChhhcCchhhccCCCCchhhHHHHHHHHHH
Confidence 0001357889999999988889999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCCCCcc-cccc-CchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004998 304 LFC---PFSTGEEKTRTMSSLRHRVLPPQ-LLLK-FPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~~~p~~-~~~~-~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
|++ ||.......... .+.....+.. .... .+...+|+.+||..+|.+||++.+++.||||....
T Consensus 208 ll~g~~pf~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h~~~~~~~ 276 (293)
T cd06647 208 MVEGEPPYLNENPLRALY-LIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHPFLKIAK 276 (293)
T ss_pred HHhCCCCCCCCChhhhee-ehhcCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhcCc
Confidence 999 565543322211 1111111111 1112 23455999999999999999999999999999774
No 320
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.95 E-value=5.9e-28 Score=256.38 Aligned_cols=209 Identities=17% Similarity=0.188 Sum_probs=154.0
Q ss_pred ehhhhccc-CCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH-cCce
Q 004998 66 SDGVELTH-GDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-QGIV 143 (720)
Q Consensus 66 ~e~~~Ls~-l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs-~gIv 143 (720)
+|..++.. .+||||+++++ .+.++. .+|++|||.+++|..++......+++..+..++.||+.||.|||+ .||+
T Consensus 62 ~e~~~~~~~~~~~~i~~~~~-~~~~~~---~~~~v~e~~~~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~ 137 (296)
T cd06618 62 MDLDVVLKSHDCPYIVKCYG-YFITDS---DVFICMELMSTCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVI 137 (296)
T ss_pred HHHHHHHhccCCCchHhhhe-eeecCC---eEEEEeeccCcCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEe
Confidence 34434444 45999999999 444443 579999997778888885544569999999999999999999997 6999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||+|+||+++.++.++|+|||.+.......
T Consensus 138 H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~------------------------------------------------ 169 (296)
T cd06618 138 HRDVKPSNILLDASGNVKLCDFGISGRLVDSK------------------------------------------------ 169 (296)
T ss_pred cCCCcHHHEEEcCCCCEEECccccchhccCCC------------------------------------------------
Confidence 99999999999999999999988763221100
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC----CCccccchhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP----VSCASDIYRLGV 299 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~----~s~~sDIwSLGv 299 (720)
......+++.|+|||.+.+.. ++.++|||||||
T Consensus 170 -------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~ 206 (296)
T cd06618 170 -------------------------------------------AKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGI 206 (296)
T ss_pred -------------------------------------------cccCCCCCccccCHhhcCCCCCccccccchhHHHHHH
Confidence 000124678899999997653 789999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhcCCCCcccc--ccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004998 300 LLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLL--LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~--~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
++|+|++ ||............+.....+.... .......+|+.+||+.||.+||++.++++||||.....
T Consensus 207 il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~ 281 (296)
T cd06618 207 SLVELATGQFPYKNCKTEFEVLTKILQEEPPSLPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPFIRRYET 281 (296)
T ss_pred HHHHHHhCCCCCCcchhHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcChhhhccch
Confidence 9999999 5544333223333332222211111 12234569999999999999999999999999987633
No 321
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=99.95 E-value=7.6e-28 Score=251.29 Aligned_cols=207 Identities=14% Similarity=0.119 Sum_probs=155.7
Q ss_pred eehhhhcccCCCCCceecccceeecCC--CCCcEEEEEec-CCCCHHHHHhC-----CCCCCCHHHHHHHHHHHHHHHHH
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEA--AIDPFVHAIEW-GDVSLRQWLDK-----PKRSVDVYECLHIFRQIVEIVYA 136 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~--~~~~~~lv~E~-~ggsL~~~L~~-----~~~~l~~~~~~~i~~QIl~aL~y 136 (720)
.+|..+++.++||||+++++.++.... .....+++||| .+++|..++.. ....+++..++.++.||+.||.|
T Consensus 49 ~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~ 128 (273)
T cd05035 49 LSEAACMKDFDHPNVMKLIGVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEY 128 (273)
T ss_pred HHHHHHHHhCCCCCeeeEEeeeccCCccccCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHH
Confidence 366778999999999999994443321 22347999999 99999999832 12358999999999999999999
Q ss_pred HHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCC
Q 004998 137 AHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 216 (720)
Q Consensus 137 LHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~ 216 (720)
||++||+||||||+||++++++.+||+|||.++....... +
T Consensus 129 lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~---------------------------------~------ 169 (273)
T cd05035 129 LSNRNFIHRDLAARNCMLREDMTVCVADFGLSKKIYSGDY---------------------------------Y------ 169 (273)
T ss_pred HHhCCeeccccchheEEECCCCeEEECCccceeecccccc---------------------------------c------
Confidence 9999999999999999999999999999988743211100 0
Q ss_pred CCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchh
Q 004998 217 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYR 296 (720)
Q Consensus 217 ~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwS 296 (720)
. ......++..|+|||.+.+..++.++||||
T Consensus 170 -----------------------------~--------------------~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~S 200 (273)
T cd05035 170 -----------------------------R--------------------QGRIAKMPVKWIAIESLADRVYTSKSDVWA 200 (273)
T ss_pred -----------------------------c--------------------ccccccCCccccCHhhcccCCCCcccchHH
Confidence 0 000012356799999998888999999999
Q ss_pred hhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 297 LGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 297 LGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++|||++ ||..... ......+.....++......+...+++.+||..||.+|||+.|++.
T Consensus 201 lG~il~el~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~ 267 (273)
T cd05035 201 FGVTMWEIATRGQTPYPGVEN-HEIYDYLRHGNRLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLRE 267 (273)
T ss_pred HHHHHHHHHhCCCCCCCCCCH-HHHHHHHHcCCCCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 9999999987 4544333 3444444444433333334455669999999999999999999986
No 322
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.95 E-value=8.2e-28 Score=255.42 Aligned_cols=210 Identities=19% Similarity=0.225 Sum_probs=154.2
Q ss_pred eehhhhcccCCCCCceecccceeecCC-------CCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHH
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEA-------AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAA 137 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~-------~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yL 137 (720)
.+|..++.+++||||+++++ ++.+.. ....+|+++||.+++|.+++......+++..++.++.||+.||.||
T Consensus 54 ~~e~~~~~~l~h~~i~~~~~-~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~L 132 (302)
T cd07864 54 IREIKILRQLNHRNIVNLKE-IVTDKQDALDFKKDKGAFYLVFEYMDHDLMGLLESGLVHFSEDHIKSFMKQLLEGLNYC 132 (302)
T ss_pred HHHHHHHHhCCCCCeeeeeh-eecCcchhhhccccCCcEEEEEcccCccHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 35777899999999999999 443332 2236899999966688888865555699999999999999999999
Q ss_pred HHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCC
Q 004998 138 HSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 138 Hs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~ 217 (720)
|+.||+|+||||+||+++.++.+||+|||.+........
T Consensus 133 H~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~----------------------------------------- 171 (302)
T cd07864 133 HKKNFLHRDIKCSNILLNNKGQIKLADFGLARLYNSEES----------------------------------------- 171 (302)
T ss_pred HhCCeecCCCCHHHEEECCCCcEEeCcccccccccCCcc-----------------------------------------
Confidence 999999999999999999999999999987743211100
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-CCCccccchh
Q 004998 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYR 296 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwS 296 (720)
. + .....++..|+|||.+.+. .++.++||||
T Consensus 172 --------------------------------------------~--~--~~~~~~~~~y~~PE~~~~~~~~~~~~Di~s 203 (302)
T cd07864 172 --------------------------------------------R--P--YTNKVITLWYRPPELLLGEERYGPAIDVWS 203 (302)
T ss_pred --------------------------------------------c--c--cccceeccCccChHHhcCCCCCCchhHHHH
Confidence 0 0 0002457789999988654 3789999999
Q ss_pred hhhhhhhccc---cCCCCchHHHH--HHHhhcCCCCcc--------------------------ccccCchHHHHHHHcC
Q 004998 297 LGVLLFELFC---PFSTGEEKTRT--MSSLRHRVLPPQ--------------------------LLLKFPKEASFCLWLL 345 (720)
Q Consensus 297 LGvll~eLlt---pf~~~~~~~~~--~~~l~~~~~p~~--------------------------~~~~~p~~~~li~~~L 345 (720)
|||++|||++ ||......... +........+.. +....+...+|+.+||
T Consensus 204 lG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 283 (302)
T cd07864 204 CGCILGELFTKKPIFQANQELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHML 283 (302)
T ss_pred HHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHc
Confidence 9999999999 45433322111 111111111100 1112234459999999
Q ss_pred CCCCCCCCChHHHHcCccc
Q 004998 346 HPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 346 ~~dP~~Rpta~eiL~hp~~ 364 (720)
+.+|.+||++.+++.||||
T Consensus 284 ~~~P~~Rp~~~~il~~~~~ 302 (302)
T cd07864 284 TLDPSKRCTAEEALNSPWL 302 (302)
T ss_pred cCChhhCCCHHHHhcCCCC
Confidence 9999999999999999997
No 323
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=99.95 E-value=6e-28 Score=252.67 Aligned_cols=200 Identities=15% Similarity=0.154 Sum_probs=150.6
Q ss_pred eehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC---------------CCCCHHHHHHHH
Q 004998 65 HSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---------------RSVDVYECLHIF 127 (720)
Q Consensus 65 ~~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~---------------~~l~~~~~~~i~ 127 (720)
..|..++.++ +||||+++++ ++.... .+|++||| .+++|.+++.... ..+++..++.++
T Consensus 43 ~~E~~~l~~l~~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 118 (270)
T cd05047 43 AGELEVLCKLGHHPNIINLLG-ACEHRG---YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 118 (270)
T ss_pred HHHHHHHHhhccCCCeeeEEE-EEecCC---CceEEEEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHH
Confidence 3577788888 8999999999 444433 46999999 8999999995321 247899999999
Q ss_pred HHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccc
Q 004998 128 RQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRR 207 (720)
Q Consensus 128 ~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l 207 (720)
.||+.||+|||+.|++||||||+||+++.++.++++|||++......
T Consensus 119 ~~i~~al~~lH~~~i~H~dikp~nili~~~~~~kl~dfgl~~~~~~~--------------------------------- 165 (270)
T cd05047 119 ADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVY--------------------------------- 165 (270)
T ss_pred HHHHHHHHHHHHCCEeecccccceEEEcCCCeEEECCCCCccccchh---------------------------------
Confidence 99999999999999999999999999999999999988876211000
Q ss_pred cccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC
Q 004998 208 EDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP 287 (720)
Q Consensus 208 ~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~ 287 (720)
. .......+..|+|||++.+..
T Consensus 166 ----~------------------------------------------------------~~~~~~~~~~y~apE~~~~~~ 187 (270)
T cd05047 166 ----V------------------------------------------------------KKTMGRLPVRWMAIESLNYSV 187 (270)
T ss_pred ----h------------------------------------------------------hccCCCCccccCChHHHccCC
Confidence 0 000012356799999998888
Q ss_pred CCccccchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 288 VSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 288 ~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
++.++|||||||++|||++ ||...... .....+.....++......+...+|+.+||..+|.+|||+.++++
T Consensus 188 ~~~~~Di~slG~il~el~~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 263 (270)
T cd05047 188 YTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA-ELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILV 263 (270)
T ss_pred CCchhhHHHHHHHHHHHHcCCCCCccccCHH-HHHHHHhCCCCCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHH
Confidence 9999999999999999996 66443322 233333333222222223345569999999999999999999986
No 324
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=99.95 E-value=8e-28 Score=250.16 Aligned_cols=201 Identities=13% Similarity=0.130 Sum_probs=152.8
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
.+|..++++++||||+++++ ++... ..+++||| .+++|.+++.. ....+++..+..++.||+.||.|||+.||
T Consensus 49 ~~E~~~l~~l~h~~i~~~~~-~~~~~----~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i 123 (260)
T cd05069 49 LQEAQIMKKLRHDKLVPLYA-VVSEE----PIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNY 123 (260)
T ss_pred HHHHHHHHhCCCCCeeeEEE-EEcCC----CcEEEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence 35777999999999999998 44322 46899999 88899999954 33458999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+|+||||+||++++++.++|+|||.+.........
T Consensus 124 ~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~--------------------------------------------- 158 (260)
T cd05069 124 IHRDLRAANILVGDNLVCKIADFGLARLIEDNEYT--------------------------------------------- 158 (260)
T ss_pred eecccCcceEEEcCCCeEEECCCccceEccCCccc---------------------------------------------
Confidence 99999999999999999999988877332111000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......++..|+|||.+.+..++.++|||||||++|
T Consensus 159 --------------------------------------------~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~ 194 (260)
T cd05069 159 --------------------------------------------ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLT 194 (260)
T ss_pred --------------------------------------------ccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHH
Confidence 000023467799999998888999999999999999
Q ss_pred hccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 303 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 303 eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
||++ ||...... .....+.....++......+...+|+.+||.+||.+||+++++++
T Consensus 195 el~t~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 255 (260)
T cd05069 195 ELVTKGRVPYPGMVNR-EVLEQVERGYRMPCPQGCPESLHELMKLCWKKDPDERPTFEYIQS 255 (260)
T ss_pred HHHhCCCCCCCCCCHH-HHHHHHHcCCCCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 9997 55544332 334444443322222222234459999999999999999999875
No 325
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=99.95 E-value=8.8e-28 Score=248.01 Aligned_cols=203 Identities=18% Similarity=0.217 Sum_probs=153.2
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..|..++++++||||+++++ ++.... ..+++||| .|++|.+++.+....+++..++.++.|++.||.|||++|++
T Consensus 40 ~~e~~~l~~l~~~~i~~~~~-~~~~~~---~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~ 115 (251)
T cd05041 40 LQEAEILKQYDHPNIVKLIG-VCVQKQ---PIYIVMELVPGGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCI 115 (251)
T ss_pred HHHHHHHHhCCCCCeEEEEE-EEecCC---CeEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEe
Confidence 35677899999999999999 454443 57999999 89999999966555689999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+||+++.++.++|+|||.+....... +
T Consensus 116 h~di~p~nili~~~~~~~l~d~g~~~~~~~~~----------------------------------~------------- 148 (251)
T cd05041 116 HRDLAARNCLVGENNVLKISDFGMSREEEGGI----------------------------------Y------------- 148 (251)
T ss_pred hhhcCcceEEEcCCCcEEEeeccccccccCCc----------------------------------c-------------
Confidence 99999999999999999999998874321100 0
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
........++..|+|||.+.+..++.++|||||||++||
T Consensus 149 -----------------------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~ 187 (251)
T cd05041 149 -----------------------------------------TVSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWE 187 (251)
T ss_pred -----------------------------------------eeccccCcceeccCChHhhccCCCCcchhHHHHHHHHHH
Confidence 000000123556999999988889999999999999999
Q ss_pred ccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 304 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 304 Llt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|++ ||...... .....+......+......+...+|+.+||..+|.+|||+.|+++
T Consensus 188 l~t~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~ 247 (251)
T cd05041 188 TFSLGDTPYPGMSNQ-QTRERIESGYRMPAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYN 247 (251)
T ss_pred HHhccCCCCccCCHH-HHHHHHhcCCCCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence 997 45444332 223333322211111122234559999999999999999999986
No 326
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=99.95 E-value=9.3e-28 Score=250.25 Aligned_cols=201 Identities=14% Similarity=0.116 Sum_probs=153.4
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
.+|..++.+++||||+++++ .+... ..|++||| .+++|.+++.+ .+..+++..++.++.||+.||.|||+.||
T Consensus 49 ~~E~~~l~~l~~~~i~~~~~-~~~~~----~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i 123 (262)
T cd05071 49 LQEAQVMKKLRHEKLVQLYA-VVSEE----PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY 123 (262)
T ss_pred HHHHHHHHhCCCCCcceEEE-EECCC----CcEEEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 46777999999999999998 44332 46899999 88999999954 33458999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.++|+|||.+....... +.
T Consensus 124 ~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~----------------------------------~~----------- 158 (262)
T cd05071 124 VHRDLRAANILVGENLVCKVADFGLARLIEDNE----------------------------------YT----------- 158 (262)
T ss_pred cccccCcccEEEcCCCcEEeccCCceeeccccc----------------------------------cc-----------
Confidence 999999999999999999999998874321110 00
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......++..|+|||++.+..++.++|||||||++|
T Consensus 159 --------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ 194 (262)
T cd05071 159 --------------------------------------------ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLT 194 (262)
T ss_pred --------------------------------------------cccCCcccceecCHhHhccCCCCchhhHHHHHHHHH
Confidence 000023567899999998888999999999999999
Q ss_pred hccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 303 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 303 eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
||++ ||...... .....+......+......+...+|+.+||+++|++||++.++++
T Consensus 195 ellt~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~ 255 (262)
T cd05071 195 ELTTKGRVPYPGMVNR-EVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQA 255 (262)
T ss_pred HHHcCCCCCCCCCChH-HHHHHHhcCCCCCCccccCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 9998 56544333 333333333222222222334559999999999999999999875
No 327
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.95 E-value=1e-27 Score=256.99 Aligned_cols=203 Identities=16% Similarity=0.174 Sum_probs=152.1
Q ss_pred eehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC---------------CCCCCHHHHHHHH
Q 004998 65 HSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---------------KRSVDVYECLHIF 127 (720)
Q Consensus 65 ~~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~---------------~~~l~~~~~~~i~ 127 (720)
..|..++.++ +||||+++++ ++.... .+|++||| .+++|.+++... ...+++.++..++
T Consensus 65 ~~E~~~l~~l~~h~~iv~~~~-~~~~~~---~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 140 (314)
T cd05099 65 ISEMELMKLIGKHKNIINLLG-VCTQEG---PLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCA 140 (314)
T ss_pred HHHHHHHHhccCCCCeeeEEE-EEccCC---ceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHH
Confidence 3567788888 6999999999 554432 57999999 899999999432 1348899999999
Q ss_pred HHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccc
Q 004998 128 RQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRR 207 (720)
Q Consensus 128 ~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l 207 (720)
.||+.||.|||++||+||||||+|||++.++.+||+|||.++.......
T Consensus 141 ~qi~~aL~~lH~~gi~H~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~------------------------------- 189 (314)
T cd05099 141 YQVARGMEYLESRRCIHRDLAARNVLVTEDNVMKIADFGLARGVHDIDY------------------------------- 189 (314)
T ss_pred HHHHHHHHHHHHCCeeeccccceeEEEcCCCcEEEcccccccccccccc-------------------------------
Confidence 9999999999999999999999999999999999999988743211000
Q ss_pred cccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC
Q 004998 208 EDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP 287 (720)
Q Consensus 208 ~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~ 287 (720)
. . ......++..|+|||++.+..
T Consensus 190 --~--------------------------------------------------~-----~~~~~~~~~~y~aPE~~~~~~ 212 (314)
T cd05099 190 --Y--------------------------------------------------K-----KTSNGRLPVKWMAPEALFDRV 212 (314)
T ss_pred --c--------------------------------------------------c-----ccccCCCCccccCHHHHccCC
Confidence 0 0 000012356799999998888
Q ss_pred CCccccchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 288 VSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 288 ~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
++.++|||||||++|||++ ||..... ......+.....+........+..+|+.+||..+|++|||+.++++
T Consensus 213 ~~~~~DiwslG~~l~el~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~ 288 (314)
T cd05099 213 YTHQSDVWSFGILMWEIFTLGGSPYPGIPV-EELFKLLREGHRMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVE 288 (314)
T ss_pred cCccchhhHHHHHHHHHHhCCCCCCCCCCH-HHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 9999999999999999997 4544332 2334444433322222222234569999999999999999999985
No 328
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=99.95 E-value=6.4e-28 Score=262.06 Aligned_cols=206 Identities=19% Similarity=0.222 Sum_probs=152.9
Q ss_pred eehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC---------------------------
Q 004998 65 HSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK--------------------------- 115 (720)
Q Consensus 65 ~~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~--------------------------- 115 (720)
.+|..+|.++ +||||+++++.+...+ ..++++||| .+++|.+++....
T Consensus 58 ~~E~~~l~~l~~h~niv~~~~~~~~~~---~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (343)
T cd05103 58 MSELKILIHIGHHLNVVNLLGACTKPG---GPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDL 134 (343)
T ss_pred HHHHHHHHhccCCccHhhhcceeecCC---CceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhh
Confidence 3677788888 6899999999433332 257899999 9999999984321
Q ss_pred ---------------------------------------CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEcc
Q 004998 116 ---------------------------------------RSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSS 156 (720)
Q Consensus 116 ---------------------------------------~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~ 156 (720)
..++...+..++.||+.||.|||++||+||||||+|||++.
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~ 214 (343)
T cd05103 135 KRRLDSITSSQSSASSGFVEEKSLSDVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSE 214 (343)
T ss_pred hhhccccccccccccccccCCCccccchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcC
Confidence 23677888999999999999999999999999999999999
Q ss_pred CCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccCCCcccccc
Q 004998 157 FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHV 236 (720)
Q Consensus 157 ~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~ 236 (720)
++.++|+|||++....... .+
T Consensus 215 ~~~~kl~dfg~~~~~~~~~---------------------------------~~-------------------------- 235 (343)
T cd05103 215 NNVVKICDFGLARDIYKDP---------------------------------DY-------------------------- 235 (343)
T ss_pred CCcEEEEecccccccccCc---------------------------------ch--------------------------
Confidence 9999999999874321110 00
Q ss_pred ccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhccc----cCCCCc
Q 004998 237 VLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC----PFSTGE 312 (720)
Q Consensus 237 ~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt----pf~~~~ 312 (720)
. ......+++.|+|||.+.+..++.++|||||||++|+|++ ||....
T Consensus 236 -----------~------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~ 286 (343)
T cd05103 236 -----------V------------------RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK 286 (343)
T ss_pred -----------h------------------hcCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCcc
Confidence 0 0000234677999999988889999999999999999986 555433
Q ss_pred hHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004998 313 EKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 313 ~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~h 361 (720)
........+..+..++......+...+++.+||+.||++|||+.||++|
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~ 335 (343)
T cd05103 287 IDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 335 (343)
T ss_pred ccHHHHHHHhccCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 2223333333333222222233566799999999999999999999874
No 329
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.95 E-value=6.8e-28 Score=257.38 Aligned_cols=204 Identities=17% Similarity=0.172 Sum_probs=154.1
Q ss_pred eeehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC---------------CCCCHHHHHHH
Q 004998 64 KHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---------------RSVDVYECLHI 126 (720)
Q Consensus 64 ~~~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~---------------~~l~~~~~~~i 126 (720)
...|..++..+ +||||+++++ ++.... .+|++||| .+++|.++|.... ..+++.+++.+
T Consensus 70 ~~~e~~~l~~l~~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 145 (307)
T cd05098 70 LISEMEMMKMIGKHKNIINLLG-ACTQDG---PLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSC 145 (307)
T ss_pred HHHHHHHHHHhcCCCCEeeEEE-EEecCC---ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHH
Confidence 33577788888 7999999999 554443 57999999 8899999995421 24888999999
Q ss_pred HHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccc
Q 004998 127 FRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLR 206 (720)
Q Consensus 127 ~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 206 (720)
+.||+.||+|||++|++||||||+||+++.++.++|+|||.+......
T Consensus 146 ~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~~~~kL~dfg~a~~~~~~-------------------------------- 193 (307)
T cd05098 146 AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI-------------------------------- 193 (307)
T ss_pred HHHHHHHHHHHHHCCcccccccHHheEEcCCCcEEECCCccccccccc--------------------------------
Confidence 999999999999999999999999999999999999999887432110
Q ss_pred ccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC
Q 004998 207 REDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA 286 (720)
Q Consensus 207 l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 286 (720)
++.. ......+++.|+|||.+.+.
T Consensus 194 --~~~~------------------------------------------------------~~~~~~~~~~y~aPE~~~~~ 217 (307)
T cd05098 194 --DYYK------------------------------------------------------KTTNGRLPVKWMAPEALFDR 217 (307)
T ss_pred --chhh------------------------------------------------------ccccCCCccceeChHHhccC
Confidence 0000 00001245689999999888
Q ss_pred CCCccccchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 287 PVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 287 ~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
.++.++|||||||++|||++ ||... ........+.....++......+...+|+.+||+.+|.+||++.++++
T Consensus 218 ~~~~~~DvwslG~~l~el~~~g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~ 294 (307)
T cd05098 218 IYTHQSDVWSFGVLLWEIFTLGGSPYPGV-PVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 294 (307)
T ss_pred CCCcHHHHHHHHHHHHHHHcCCCCCCCcC-CHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence 89999999999999999987 45433 333444444444333322223345569999999999999999999986
No 330
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=99.95 E-value=9.2e-28 Score=252.91 Aligned_cols=208 Identities=19% Similarity=0.139 Sum_probs=150.4
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..+|++++||||+++++.++..+ ...++++||| .+++|.+++.+....+++..++.++.||+.||.|||++||
T Consensus 52 ~~~e~~~l~~l~h~~iv~~~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~i 129 (284)
T cd05081 52 FEREIEILKSLQHDNIVKYKGVCYSAG--RRNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRY 129 (284)
T ss_pred HHHHHHHHHhCCCCCeeEEEEEEccCC--CCceEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 346778999999999999999433322 2357999999 8999999996554558999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.++|+|||++....... ++
T Consensus 130 ~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~---------------------------------~~------------ 164 (284)
T cd05081 130 VHRDLATRNILVESENRVKIGDFGLTKVLPQDK---------------------------------EY------------ 164 (284)
T ss_pred eeccCCHhhEEECCCCeEEECCCcccccccCCC---------------------------------cc------------
Confidence 999999999999999999999988874321100 00
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
... .....++..|+|||.+.+..++.++|||||||++|
T Consensus 165 ----------------------~~~--------------------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ 202 (284)
T cd05081 165 ----------------------YKV--------------------REPGESPIFWYAPESLTESKFSVASDVWSFGVVLY 202 (284)
T ss_pred ----------------------eee--------------------cCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHH
Confidence 000 00012345699999998888999999999999999
Q ss_pred hcccc---CCCCchH---------------HHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 303 ELFCP---FSTGEEK---------------TRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 303 eLltp---f~~~~~~---------------~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
||++. +...... ......+.....++......+...+|+.+||.++|++|||+.|+++
T Consensus 203 el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 278 (284)
T cd05081 203 ELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELAL 278 (284)
T ss_pred HHhhcCCcCCCcchhhhhhcccccccccchHHHHHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 99982 2111100 0011111122222222222234559999999999999999999986
No 331
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.95 E-value=8.7e-28 Score=248.19 Aligned_cols=205 Identities=20% Similarity=0.253 Sum_probs=161.5
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC---CCCCCCHHHHHHHHHHHHHHHHHHH
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~---~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
+...|..++++++||||+++++.++. . ...|++||| .+++|.+++.+ ....+++..++.++.||+.||.|||
T Consensus 45 ~~~~e~~~l~~l~~~~i~~~~~~~~~-~---~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh 120 (256)
T cd08530 45 DAVNEIRILASVNHPNIISYKEAFLD-G---NKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALH 120 (256)
T ss_pred HHHHHHHHHHhCCCCCchhhhhhhcc-C---CEEEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHh
Confidence 33467788999999999999994443 3 368999999 89999999944 2345899999999999999999999
Q ss_pred HcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCC
Q 004998 139 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
+.|++|+||+|+||+++.++.++++|||.+...... +
T Consensus 121 ~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~-----------------------------------~-------- 157 (256)
T cd08530 121 EQKILHRDLKSANILLVANDLVKIGDLGISKVLKKN-----------------------------------M-------- 157 (256)
T ss_pred hCCcccCCCCcceEEEecCCcEEEeeccchhhhccC-----------------------------------C--------
Confidence 999999999999999999999999998877322110 0
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhh
Q 004998 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
.....|++.|+|||.+.+..++.++|+||||
T Consensus 158 -------------------------------------------------~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG 188 (256)
T cd08530 158 -------------------------------------------------AKTQIGTPHYMAPEVWKGRPYSYKSDIWSLG 188 (256)
T ss_pred -------------------------------------------------cccccCCccccCHHHHCCCCCCchhhHHHHH
Confidence 0002468889999999988899999999999
Q ss_pred hhhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004998 299 VLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
+++|+|++ ||...... .....+.....++..........+++.+||+.+|.+||++.++++||++
T Consensus 189 ~~~~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~p~~ 256 (256)
T cd08530 189 CLLYEMATFAPPFEARSMQ-DLRYKVQRGKYPPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILASPAV 256 (256)
T ss_pred HHHHHHHhCCCCCCCCCHH-HHHHHHhcCCCCCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhcCCCC
Confidence 99999998 56554433 3333344444444333333455699999999999999999999999985
No 332
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=99.95 E-value=1e-27 Score=248.98 Aligned_cols=201 Identities=16% Similarity=0.157 Sum_probs=155.3
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..|..++..++||||+++++ ++.... .++++||| .+++|.+++.. .+..+++..++.++.||+.||.|||++||
T Consensus 50 ~~e~~~l~~l~~~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i 125 (261)
T cd05148 50 QKEVQALKRLRHKHLISLFA-VCSVGE---PVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNS 125 (261)
T ss_pred HHHHHHHhcCCCcchhheee-eEecCC---CeEEEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 36777899999999999999 554443 57999999 88999999954 34458999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+|+||||+||+++.++.++|+|||.+....... +
T Consensus 126 ~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~----------------------------------~------------ 159 (261)
T cd05148 126 IHRDLAARNILVGEDLVCKVADFGLARLIKEDV----------------------------------Y------------ 159 (261)
T ss_pred eccccCcceEEEcCCceEEEccccchhhcCCcc----------------------------------c------------
Confidence 999999999999999999999998874321110 0
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
. .....++..|+|||.+.+..++.++|||||||++|
T Consensus 160 --~------------------------------------------~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~ 195 (261)
T cd05148 160 --L------------------------------------------SSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLY 195 (261)
T ss_pred --c------------------------------------------ccCCCCceEecCHHHHccCCCCchhhHHHHHHHHH
Confidence 0 00023467899999998888999999999999999
Q ss_pred hccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 303 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 303 eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
+|++ ||...... .....+.....++......+...+++.+||..||.+|||+.++++
T Consensus 196 ~l~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~ 256 (261)
T cd05148 196 EMFTYGQVPYPGMNNH-EVYDQITAGYRMPCPAKCPQEIYKIMLECWAAEPEDRPSFKALRE 256 (261)
T ss_pred HHHcCCCCCCCcCCHH-HHHHHHHhCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 9997 55544332 333333333333333333345569999999999999999999975
No 333
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=99.95 E-value=9.4e-28 Score=248.53 Aligned_cols=202 Identities=15% Similarity=0.189 Sum_probs=153.9
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..|..++.+++||||+++++ ++.... .++++||| .+++|.+++......+++..++.++.|++.||.|||+.|++
T Consensus 47 ~~e~~~l~~l~~~~i~~~~~-~~~~~~---~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~ 122 (256)
T cd05112 47 IEEAQVMMKLSHPKLVQLYG-VCTERS---PICLVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVI 122 (256)
T ss_pred HHHHHHHHhCCCCCeeeEEE-EEccCC---ceEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 35777999999999999999 444433 57999999 89999999965555689999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
|+||||+||+++.++.++|+|||.+...+.....
T Consensus 123 h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~---------------------------------------------- 156 (256)
T cd05112 123 HRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYT---------------------------------------------- 156 (256)
T ss_pred ccccccceEEEcCCCeEEECCCcceeecccCccc----------------------------------------------
Confidence 9999999999999999999998877432111000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......++..|+|||.+.+..++.++|||||||++||
T Consensus 157 -------------------------------------------~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~e 193 (256)
T cd05112 157 -------------------------------------------SSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWE 193 (256)
T ss_pred -------------------------------------------ccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHH
Confidence 0000134668999999988889999999999999999
Q ss_pred ccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 304 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 304 Llt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|++ ||..... ......+.....+...........+|+.+||+.+|++|||+.++++
T Consensus 194 l~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~ 253 (256)
T cd05112 194 VFSEGKTPYENRSN-SEVVETINAGFRLYKPRLASQSVYELMQHCWKERPEDRPSFSLLLH 253 (256)
T ss_pred HHcCCCCCCCcCCH-HHHHHHHhCCCCCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHH
Confidence 997 5544332 2333444432221111112234459999999999999999999986
No 334
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.95 E-value=9.4e-28 Score=254.76 Aligned_cols=208 Identities=18% Similarity=0.317 Sum_probs=161.7
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..+++.++||||+++++ .+.... ..|++||| .+++|.+++... .+++..++.++.||+.||.|||+.||
T Consensus 64 ~~~e~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~ql~~~l~~lH~~gi 137 (292)
T cd06657 64 LFNEVVIMRDYQHENVVEMYN-SYLVGD---ELWVVMEFLEGGALTDIVTHT--RMNEEQIAAVCLAVLKALSVLHAQGV 137 (292)
T ss_pred HHHHHHHHHhcCCcchhheee-EEEeCC---EEEEEEecCCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 346778899999999999999 554443 67999999 899999988443 38999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+|+||||+||+++.++.++++|||.+...... +
T Consensus 138 vH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~-----------------------------------~------------ 170 (292)
T cd06657 138 IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE-----------------------------------V------------ 170 (292)
T ss_pred ecCCCCHHHEEECCCCCEEEcccccceecccc-----------------------------------c------------
Confidence 99999999999999999999999876321100 0
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
.......|++.|+|||.+.+..++.++|+|||||++|
T Consensus 171 -------------------------------------------~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~ 207 (292)
T cd06657 171 -------------------------------------------PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVI 207 (292)
T ss_pred -------------------------------------------ccccccccCccccCHHHhcCCCCCchhhHHHHHHHHH
Confidence 0000135788999999998878899999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCCCCcc---ccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004998 303 ELFC---PFSTGEEKTRTMSSLRHRVLPPQ---LLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~~~p~~---~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
+|++ ||...... .....+... .++. .....+...+++.+||..+|.+||++.+++.||||.....
T Consensus 208 el~tg~~p~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~~~~~~~~~ 278 (292)
T cd06657 208 EMVDGEPPYFNEPPL-KAMKMIRDN-LPPKLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGP 278 (292)
T ss_pred HHHhCCCCCCCCCHH-HHHHHHHhh-CCcccCCcccCCHHHHHHHHHHHhCCcccCcCHHHHhcChHHhccCC
Confidence 9998 56544332 222233222 2222 2223355569999999999999999999999999998754
No 335
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=99.95 E-value=3.5e-28 Score=285.26 Aligned_cols=220 Identities=19% Similarity=0.318 Sum_probs=152.5
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC----------CCCCCHHHHHHHHHHHH
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP----------KRSVDVYECLHIFRQIV 131 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~----------~~~l~~~~~~~i~~QIl 131 (720)
|..+|..++++++||||+++++ ++.+.. ..|++||| .|++|.+++... ...++...++.++.||+
T Consensus 48 rflrEi~ILs~L~HPNIVkl~~-v~~d~~---~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa 123 (932)
T PRK13184 48 RFLREAKIAADLIHPGIVPVYS-ICSDGD---PVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKIC 123 (932)
T ss_pred HHHHHHHHHHhCCCcCcCeEEE-EEeeCC---EEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHH
Confidence 4447888999999999999999 554443 57999999 999999998431 12355678899999999
Q ss_pred HHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccc
Q 004998 132 EIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQ 211 (720)
Q Consensus 132 ~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfg 211 (720)
.||+|||++||+||||||+|||++.++.++|+|||++.......... .+.
T Consensus 124 ~AL~yLHs~GIIHRDLKPeNILLd~dg~vKLiDFGLAk~i~~~~~~~-----------------------------~~l- 173 (932)
T PRK13184 124 ATIEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGAAIFKKLEEEDL-----------------------------LDI- 173 (932)
T ss_pred HHHHHHHHCCccccCCchheEEEcCCCCEEEEecCcceecccccccc-----------------------------ccc-
Confidence 99999999999999999999999999999999999985542110000 000
Q ss_pred cccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCcc
Q 004998 212 LVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCA 291 (720)
Q Consensus 212 la~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~ 291 (720)
.... ...+ ... .......+||+.|+|||++.+..++.+
T Consensus 174 --~~~~----~~s~-----------------------------------~s~-~t~~g~~vGT~~YmAPE~l~g~~~S~k 211 (932)
T PRK13184 174 --DVDE----RNIC-----------------------------------YSS-MTIPGKIVGTPDYMAPERLLGVPASES 211 (932)
T ss_pred --cccc----cccc-----------------------------------ccc-cccCCCCCCCCCCCCHHHhcCCCCCcH
Confidence 0000 0000 000 000012479999999999999999999
Q ss_pred ccchhhhhhhhhccc---cCCCCchHHHHHHHhhcCCCCccc--cccCc-hHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 292 SDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQL--LLKFP-KEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 292 sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~--~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
+|||||||++|||++ ||.............. ..|... ....| ...+++.+||.+||++||+..+.+.
T Consensus 212 SDIWSLGVILyELLTG~~PF~~~~~~ki~~~~~i--~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl 284 (932)
T PRK13184 212 TDIYALGVILYQMLTLSFPYRRKKGRKISYRDVI--LSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELK 284 (932)
T ss_pred hHHHHHHHHHHHHHHCCCCCCCcchhhhhhhhhc--cChhhccccccCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 999999999999999 6654332211111111 111111 12233 3459999999999999987655543
No 336
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.95 E-value=1.5e-27 Score=250.82 Aligned_cols=206 Identities=19% Similarity=0.266 Sum_probs=154.7
Q ss_pred eeehhhhcccCC-CCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 64 KHSDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 64 ~~~e~~~Ls~l~-HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~-~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
..+|...+.+++ ||||+++++ ++.++ ...|+||||.+++|.+++.... ..+++..++.++.||+.+|.|||++|
T Consensus 44 ~~~e~~~l~~~~~h~~i~~~~~-~~~~~---~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~ 119 (283)
T cd07830 44 NLREVKSLRKLNEHPNIVKLKE-VFREN---DELYFVFEYMEGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHG 119 (283)
T ss_pred HHHHHHHHHhccCCCCchhHHH-HhhcC---CcEEEEEecCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 345777888999 999999999 44443 3679999998889999985443 45899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+|+||+|+||+++.++.++|+|||.+.......
T Consensus 120 i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~---------------------------------------------- 153 (283)
T cd07830 120 FFHRDLKPENLLVSGPEVVKIADFGLAREIRSRP---------------------------------------------- 153 (283)
T ss_pred cccCCCChhhEEEcCCCCEEEeecccceeccCCC----------------------------------------------
Confidence 9999999999999999999999988763211000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-CCCccccchhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVL 300 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGvl 300 (720)
......++..|+|||++.+. .++.++||||||++
T Consensus 154 ---------------------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~ 188 (283)
T cd07830 154 ---------------------------------------------PYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCI 188 (283)
T ss_pred ---------------------------------------------CcCCCCCcccccCceeeecCcCcCCccchhhHHHH
Confidence 00013578899999988554 47999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhh--cC------------------CCC--------ccccccCchHHHHHHHcCCCCC
Q 004998 301 LFELFC---PFSTGEEKTRTMSSLR--HR------------------VLP--------PQLLLKFPKEASFCLWLLHPEP 349 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~--~~------------------~~p--------~~~~~~~p~~~~li~~~L~~dP 349 (720)
+|||++ ||.............. .. .++ ..+....+...+|+.+||+.+|
T Consensus 189 l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p 268 (283)
T cd07830 189 MAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDP 268 (283)
T ss_pred HHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhccccccccccccccHHHHcccCCHHHHHHHHHhcccCc
Confidence 999999 4544333222211110 00 000 0011123455699999999999
Q ss_pred CCCCChHHHHcCccc
Q 004998 350 SGRPKMGELLQSEFL 364 (720)
Q Consensus 350 ~~Rpta~eiL~hp~~ 364 (720)
++|||+.|++.||||
T Consensus 269 ~~Rpt~~ei~~~~~~ 283 (283)
T cd07830 269 KKRPTASQALQHPYF 283 (283)
T ss_pred ccCCCHHHHhhCCCC
Confidence 999999999999997
No 337
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=99.95 E-value=1.2e-27 Score=253.20 Aligned_cols=204 Identities=16% Similarity=0.183 Sum_probs=154.1
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC-----------------------CCCCC
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-----------------------KRSVD 119 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~-----------------------~~~l~ 119 (720)
...|..+|+.++||||+++++ .+.... ..+++||| .+++|.+++... ...++
T Consensus 50 ~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 125 (290)
T cd05045 50 LLSEFNLLKQVNHPHVIKLYG-ACSQDG---PLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALT 125 (290)
T ss_pred HHHHHHHHhhCCCCCEeeEEE-EEecCC---CcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccC
Confidence 446788999999999999999 444433 46899999 889999998431 13478
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhH
Q 004998 120 VYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDML 199 (720)
Q Consensus 120 ~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (720)
+..++.++.||+.||.|||+.||+||||||+|||+++++.++|+|||.++......
T Consensus 126 ~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~nill~~~~~~kl~dfg~~~~~~~~~------------------------ 181 (290)
T cd05045 126 MGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEED------------------------ 181 (290)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCeehhhhhhheEEEcCCCcEEeccccccccccCcc------------------------
Confidence 99999999999999999999999999999999999999999999998874321100
Q ss_pred hhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccC
Q 004998 200 QRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYAS 279 (720)
Q Consensus 200 ~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~A 279 (720)
+. .......++..|+|
T Consensus 182 ---------~~-------------------------------------------------------~~~~~~~~~~~y~a 197 (290)
T cd05045 182 ---------SY-------------------------------------------------------VKRSKGRIPVKWMA 197 (290)
T ss_pred ---------ch-------------------------------------------------------hcccCCCCCccccC
Confidence 00 00000234668999
Q ss_pred CccccCCCCCccccchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCCh
Q 004998 280 PEELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM 355 (720)
Q Consensus 280 PE~l~~~~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta 355 (720)
||.+.+..++.++|||||||++|||++ ||..... ......+.....++..........+|+.+||+++|.+||++
T Consensus 198 pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~ 276 (290)
T cd05045 198 IESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAP-ERLFNLLKTGYRMERPENCSEEMYNLMLTCWKQEPDKRPTF 276 (290)
T ss_pred HHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCH-HHHHHHHhCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCH
Confidence 999988889999999999999999997 5654433 23344444333222222233455699999999999999999
Q ss_pred HHHHc
Q 004998 356 GELLQ 360 (720)
Q Consensus 356 ~eiL~ 360 (720)
.+++.
T Consensus 277 ~~i~~ 281 (290)
T cd05045 277 ADISK 281 (290)
T ss_pred HHHHH
Confidence 99975
No 338
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.95 E-value=1.2e-27 Score=251.34 Aligned_cols=207 Identities=19% Similarity=0.211 Sum_probs=154.9
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCceec
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 145 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHr 145 (720)
+|..++.+++||||+++++ ++.... ....+++|||.+++|.+++......+++..++.++.||+.||.|||++|++|+
T Consensus 47 ~e~~~l~~l~~~~i~~~~~-~~~~~~-~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~ 124 (287)
T cd07840 47 REIKLLQKLRHPNIVRLKE-IVTSKG-KGSIYMVFEYMDHDLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHR 124 (287)
T ss_pred HHHHHHHhccCCCeeehee-eEecCC-CCcEEEEeccccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCceec
Confidence 5777899999999999999 443331 23689999996679999996654569999999999999999999999999999
Q ss_pred cCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccccc
Q 004998 146 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 225 (720)
Q Consensus 146 DLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~ 225 (720)
||||+||+++.++.++++|||.+........
T Consensus 125 dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~------------------------------------------------- 155 (287)
T cd07840 125 DIKGSNILINNDGVLKLADFGLARPYTKRNS------------------------------------------------- 155 (287)
T ss_pred cCcHHHeEEcCCCCEEEccccceeeccCCCc-------------------------------------------------
Confidence 9999999999999999999988743211100
Q ss_pred ccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-CCCccccchhhhhhhhhc
Q 004998 226 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFEL 304 (720)
Q Consensus 226 ~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGvll~eL 304 (720)
.......++..|+|||.+.+. .++.++|||||||++|||
T Consensus 156 ----------------------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el 195 (287)
T cd07840 156 ----------------------------------------ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAEL 195 (287)
T ss_pred ----------------------------------------ccccccccccccCCceeeEccccCChHHHHHHHHHHHHHH
Confidence 000012467889999987654 479999999999999999
Q ss_pred cc---cCCCCchHHHHHHHhhcC--CC-----------------------C----cccccc-CchHHHHHHHcCCCCCCC
Q 004998 305 FC---PFSTGEEKTRTMSSLRHR--VL-----------------------P----PQLLLK-FPKEASFCLWLLHPEPSG 351 (720)
Q Consensus 305 lt---pf~~~~~~~~~~~~l~~~--~~-----------------------p----~~~~~~-~p~~~~li~~~L~~dP~~ 351 (720)
++ ||....... ....+... .. + ..+... .+...+++.+||..+|.+
T Consensus 196 ~t~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~ 274 (287)
T cd07840 196 FLGKPIFQGSTELE-QLEKIFELCGSPTDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKK 274 (287)
T ss_pred HhCCCCCCCCChHH-HHHHHHHHhCCCchhhccccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhh
Confidence 99 555443321 11111110 00 0 001111 334459999999999999
Q ss_pred CCChHHHHcCccc
Q 004998 352 RPKMGELLQSEFL 364 (720)
Q Consensus 352 Rpta~eiL~hp~~ 364 (720)
||++.++++||||
T Consensus 275 Rp~~~~~l~~~~~ 287 (287)
T cd07840 275 RISADQALQHEYF 287 (287)
T ss_pred CcCHHHHhhCcCC
Confidence 9999999999997
No 339
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=99.95 E-value=1.6e-27 Score=249.03 Aligned_cols=206 Identities=14% Similarity=0.179 Sum_probs=153.2
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..|..++.+++||||+++++ ++..+. .++++||| .+++|.+++......+++.+++.++.|++.||.|||++|++
T Consensus 53 ~~e~~~l~~l~h~ni~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~~ 128 (269)
T cd05065 53 LSEASIMGQFDHPNIIHLEG-VVTKSR---PVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYV 128 (269)
T ss_pred HHHHHHHHhCCCcCcceEEE-EECCCC---ceEEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEe
Confidence 36777899999999999999 444433 57999999 88999999966555689999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
|+||||+||+++.++.++++|||.+......... ..+
T Consensus 129 H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~------------------------------~~~------------- 165 (269)
T cd05065 129 HRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSD------------------------------PTY------------- 165 (269)
T ss_pred ecccChheEEEcCCCcEEECCCccccccccCccc------------------------------ccc-------------
Confidence 9999999999999999999998876432111000 000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
. .......+..|+|||.+.+..++.++|||||||++||
T Consensus 166 -----------------------~-------------------~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e 203 (269)
T cd05065 166 -----------------------T-------------------SSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWE 203 (269)
T ss_pred -----------------------c-------------------cccCCCcceeecCHhHhccCcccchhhhhhhHHHHHH
Confidence 0 0000112457999999998889999999999999999
Q ss_pred ccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 304 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 304 Llt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|++ ||...... .....+......+......+...+++.+||..+|.+||++.+++.
T Consensus 204 ~l~~g~~p~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 263 (269)
T cd05065 204 VMSYGERPYWDMSNQ-DVINAIEQDYRLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVS 263 (269)
T ss_pred HhcCCCCCCCCCCHH-HHHHHHHcCCcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 875 56544333 333333332222222222234459999999999999999999985
No 340
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.95 E-value=6.2e-28 Score=264.27 Aligned_cols=200 Identities=18% Similarity=0.219 Sum_probs=159.0
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|+.++.+++|||||++||+..... ++|+|||+ .||+|.++|++.+..++..+...++.+.+.||+|||++++||
T Consensus 210 ~EArvMr~l~H~NVVr~yGVa~~~~----Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IH 285 (474)
T KOG0194|consen 210 KEARVMRQLNHPNVVRFYGVAVLEE----PLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKNCIH 285 (474)
T ss_pred HHHHHHHhCCCCCEEEEEEEEcCCC----ccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCCCcc
Confidence 8899999999999999999444333 68999999 999999999777667999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||-..|+|++.++.+||+|||+++.-..... ..+
T Consensus 286 RDIAARNcL~~~~~~vKISDFGLs~~~~~~~~-------------------------------~~~-------------- 320 (474)
T KOG0194|consen 286 RDIAARNCLYSKKGVVKISDFGLSRAGSQYVM-------------------------------KKF-------------- 320 (474)
T ss_pred hhHhHHHheecCCCeEEeCccccccCCcceee-------------------------------ccc--------------
Confidence 99999999999999999999888632100000 000
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhc
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 304 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eL 304 (720)
. .--...|+|||.+....|++++|||||||++||+
T Consensus 321 ------------------------------------~---------~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Ei 355 (474)
T KOG0194|consen 321 ------------------------------------L---------KKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEI 355 (474)
T ss_pred ------------------------------------c---------ccCcceecChhhhccCccccccchhheeeeEEee
Confidence 0 0114569999999998999999999999999999
Q ss_pred cc----cCCCCchHHHHHHHhhcCCCCccccccCchHH-HHHHHcCCCCCCCCCChHHHHc
Q 004998 305 FC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 305 lt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~-~li~~~L~~dP~~Rpta~eiL~ 360 (720)
++ ||.+.... .+...+....++...+...|.+. .++..|+..+|++||++.++.+
T Consensus 356 f~~g~~Py~g~~~~-~v~~kI~~~~~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~ 415 (474)
T KOG0194|consen 356 FENGAEPYPGMKNY-EVKAKIVKNGYRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKK 415 (474)
T ss_pred eccCCCCCCCCCHH-HHHHHHHhcCccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHH
Confidence 98 78776655 44445533223333333555554 8889999999999999999875
No 341
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.95 E-value=9.6e-28 Score=259.10 Aligned_cols=210 Identities=17% Similarity=0.184 Sum_probs=156.7
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCceec
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 145 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHr 145 (720)
.|..++.+++||||+++++.+..... .+|++|||.+++|.+++... .+++..+..++.||+.||.|||++||+||
T Consensus 58 ~E~~~l~~l~hpniv~~~~~~~~~~~---~~~lv~e~~~~~L~~~~~~~--~~~~~~~~~~~~ql~~aL~~LH~~~iiH~ 132 (328)
T cd07856 58 RELKLLKHLRHENIISLSDIFISPLE---DIYFVTELLGTDLHRLLTSR--PLEKQFIQYFLYQILRGLKYVHSAGVVHR 132 (328)
T ss_pred HHHHHHHhcCCCCeeeEeeeEecCCC---cEEEEeehhccCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence 57779999999999999994333232 57899999888999988543 38899999999999999999999999999
Q ss_pred cCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccccc
Q 004998 146 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 225 (720)
Q Consensus 146 DLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~ 225 (720)
||||+||+++.++.++|+|||.+......
T Consensus 133 dl~p~Nili~~~~~~~l~dfg~~~~~~~~--------------------------------------------------- 161 (328)
T cd07856 133 DLKPSNILINENCDLKICDFGLARIQDPQ--------------------------------------------------- 161 (328)
T ss_pred CCCHHHEeECCCCCEEeCccccccccCCC---------------------------------------------------
Confidence 99999999999999999988876321000
Q ss_pred ccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-CCCCccccchhhhhhhhhc
Q 004998 226 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLFEL 304 (720)
Q Consensus 226 ~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sDIwSLGvll~eL 304 (720)
.....+++.|+|||.+.+ ..++.++|||||||++|+|
T Consensus 162 ------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el 199 (328)
T cd07856 162 ------------------------------------------MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEM 199 (328)
T ss_pred ------------------------------------------cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHH
Confidence 001356788999999866 4589999999999999999
Q ss_pred cc---cCCCCchHHHH--HHH------------------------hhcC-CCCc-cccc-cCchHHHHHHHcCCCCCCCC
Q 004998 305 FC---PFSTGEEKTRT--MSS------------------------LRHR-VLPP-QLLL-KFPKEASFCLWLLHPEPSGR 352 (720)
Q Consensus 305 lt---pf~~~~~~~~~--~~~------------------------l~~~-~~p~-~~~~-~~p~~~~li~~~L~~dP~~R 352 (720)
++ ||......... ... +... ..|. .... ..+...++|.+||..+|++|
T Consensus 200 ~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R 279 (328)
T cd07856 200 LEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKR 279 (328)
T ss_pred HhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhC
Confidence 99 55443221100 000 0000 0000 0111 22345699999999999999
Q ss_pred CChHHHHcCcccCCCccchHH
Q 004998 353 PKMGELLQSEFLNEPRDSMEE 373 (720)
Q Consensus 353 pta~eiL~hp~~~~~~~~l~e 373 (720)
||+.+++.||||.....+..+
T Consensus 280 ~t~~ell~~~~~~~~~~~~~~ 300 (328)
T cd07856 280 ISAAEALAHPYLAPYHDPTDE 300 (328)
T ss_pred CCHHHHhcCCccccccCCccc
Confidence 999999999999887665554
No 342
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=99.95 E-value=1.5e-27 Score=253.13 Aligned_cols=204 Identities=16% Similarity=0.180 Sum_probs=150.9
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC-----------CCCCHHHHHHHHHHHHH
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-----------RSVDVYECLHIFRQIVE 132 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~-----------~~l~~~~~~~i~~QIl~ 132 (720)
.+|..++.+++||||+++++ ++.... ..+++||| .+++|.+++.... ..+++..++.++.||+.
T Consensus 65 ~~ei~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~ 140 (295)
T cd05097 65 LKEIKIMSRLKNPNIIRLLG-VCVSDD---PLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIAS 140 (295)
T ss_pred HHHHHHHHhCCCCCcCeEEE-EEcCCC---ccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHH
Confidence 35777999999999999999 554433 57999999 8999999994321 23688899999999999
Q ss_pred HHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccccccccc
Q 004998 133 IVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQL 212 (720)
Q Consensus 133 aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgl 212 (720)
||.|||++|++||||||+||+++.++.+||+|||++........ +
T Consensus 141 al~~lH~~~i~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~---------------------------------~-- 185 (295)
T cd05097 141 GMKYLASLNFVHRDLATRNCLVGNHYTIKIADFGMSRNLYSGDY---------------------------------Y-- 185 (295)
T ss_pred HHHHHHhcCeeccccChhhEEEcCCCcEEecccccccccccCcc---------------------------------e--
Confidence 99999999999999999999999999999999988733210000 0
Q ss_pred ccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccc
Q 004998 213 VTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCAS 292 (720)
Q Consensus 213 a~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~s 292 (720)
. ......++..|+|||++.+..++.++
T Consensus 186 -~----------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~ 212 (295)
T cd05097 186 -R----------------------------------------------------IQGRAVLPIRWMAWESILLGKFTTAS 212 (295)
T ss_pred -e----------------------------------------------------ccCcCcCceeecChhhhccCCcCchh
Confidence 0 00012456789999999888899999
Q ss_pred cchhhhhhhhhccc-----cCCCCchHHHHHHH---hh---cCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 293 DIYRLGVLLFELFC-----PFSTGEEKTRTMSS---LR---HRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 293 DIwSLGvll~eLlt-----pf~~~~~~~~~~~~---l~---~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||||||++|+|++ ||............ .. ............+...+|+.+||..+|.+||++.+|++
T Consensus 213 DvwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~ 291 (295)
T cd05097 213 DVWAFGVTLWEMFTLCKEQPYSLLSDEQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHH 291 (295)
T ss_pred hHHHHHHHHHHHHHcCCCCCCcccChHHHHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 99999999999987 55543322111111 11 11111111122345569999999999999999999975
No 343
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=99.95 E-value=1.3e-27 Score=249.70 Aligned_cols=202 Identities=15% Similarity=0.193 Sum_probs=147.1
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC----CCCCHHHHHHHHHHHHHHHHHHHHc
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK----RSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~----~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+|..++..++||||+++++ .+... ..+|++||| .+++|.++|.... ...++..++.++.||+.||.|||++
T Consensus 44 ~e~~~~~~l~h~nii~~~~-~~~~~---~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~ 119 (269)
T cd05042 44 QEVQPYRELNHPNVLQCLG-QCIES---IPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQA 119 (269)
T ss_pred HHHHHHHhCCCCCcceEEE-EECCC---CceEEEEEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhc
Confidence 5677888999999999999 44433 257999999 8999999995432 2246788899999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004998 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+|||++.++.+|++|||.+........ +
T Consensus 120 ~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~---------------------------------~---------- 156 (269)
T cd05042 120 DFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDY---------------------------------Y---------- 156 (269)
T ss_pred CEecccccHhheEecCCCcEEEeccccccccccchh---------------------------------e----------
Confidence 999999999999999999999999988732111000 0
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-------CCCCcccc
Q 004998 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-------APVSCASD 293 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-------~~~s~~sD 293 (720)
.......+++.|+|||++.. ..++.++|
T Consensus 157 ---------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~D 191 (269)
T cd05042 157 ---------------------------------------------ITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSN 191 (269)
T ss_pred ---------------------------------------------eccCCCCCcccccCHHHHhhccccccccccchhhH
Confidence 00000245678999999743 34688999
Q ss_pred chhhhhhhhhccc----cCCCCchHHHHHHHhhcCC---CCccccccCchH-HHHHHHcCCCCCCCCCChHHHHc
Q 004998 294 IYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRV---LPPQLLLKFPKE-ASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 294 IwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~---~p~~~~~~~p~~-~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
||||||++|||++ ||............+.... ..+.....++.. .+++..|+ .||++|||+++|++
T Consensus 192 iwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~ 265 (269)
T cd05042 192 IWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPKPQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHE 265 (269)
T ss_pred HHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCCCcccccCCHHHHHHHHHHh-cCcccccCHHHHHH
Confidence 9999999999998 4655444333333333221 223333344444 37888888 59999999999975
No 344
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=99.95 E-value=1.8e-27 Score=248.39 Aligned_cols=204 Identities=15% Similarity=0.137 Sum_probs=152.0
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC------CCCCCCHHHHHHHHHHHHHHHHH
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK------PKRSVDVYECLHIFRQIVEIVYA 136 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~------~~~~l~~~~~~~i~~QIl~aL~y 136 (720)
..+|..+|+.++||||+++++ ++.... ..+++||| .+++|.+++.. ....+++..++.++.||+.||.|
T Consensus 46 ~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 121 (269)
T cd05044 46 FLKEAHLMSNFNHPNIVKLLG-VCLLNE---PQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVY 121 (269)
T ss_pred HHHHHHHHHhcCCCCeeeEee-eecCCC---CeEEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHH
Confidence 336778999999999999999 444433 57999999 89999999943 22347889999999999999999
Q ss_pred HHHcCceeccCCCCcEEEccCC-----ceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccc
Q 004998 137 AHSQGIVVHNVRPSCFVMSSFN-----HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQ 211 (720)
Q Consensus 137 LHs~gIvHrDLKP~NILl~~~~-----~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfg 211 (720)
||+.+++|+||||+||+++.++ .++++|||++........ +
T Consensus 122 lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~~~~~~~---------------------------------~- 167 (269)
T cd05044 122 LEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDY---------------------------------Y- 167 (269)
T ss_pred HHhCCcccCCCChheEEEecCCCCCCcceEECCcccccccccccc---------------------------------c-
Confidence 9999999999999999999877 899988887743211000 0
Q ss_pred cccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCcc
Q 004998 212 LVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCA 291 (720)
Q Consensus 212 la~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~ 291 (720)
.......++..|+|||.+.+..++.+
T Consensus 168 ------------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~ 193 (269)
T cd05044 168 ------------------------------------------------------RKEGEGLLPVRWMAPESLLDGKFTTQ 193 (269)
T ss_pred ------------------------------------------------------ccCcccCCCccccCHHHHccCCcccc
Confidence 00000234678999999998889999
Q ss_pred ccchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 292 SDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 292 sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
+|||||||++|||++ ||...... .....+.....+.......+...+|+.+||.++|.+||++.++++
T Consensus 194 ~Dv~slG~il~ellt~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 265 (269)
T cd05044 194 SDVWSFGVLMWEILTLGQQPYPALNNQ-EVLQHVTAGGRLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQE 265 (269)
T ss_pred hhHHHHHHHHHHHHHcCCCCCcccCHH-HHHHHHhcCCccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 999999999999997 55543332 333333332222211122234459999999999999999999875
No 345
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.95 E-value=1.1e-27 Score=246.83 Aligned_cols=204 Identities=20% Similarity=0.247 Sum_probs=159.3
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+...|..++.+++||||+++++ .++.+. ..|++||| .+++|.+++.... .+++..+..++.||+.||.|||+.|
T Consensus 39 ~~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~~v~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lh~~~ 113 (250)
T cd05123 39 HTLTERNILSRINHPFIVKLHY-AFQTEE---KLYLVLEYAPGGELFSHLSKEG-RFSEERARFYAAEIVLALEYLHSLG 113 (250)
T ss_pred HHHHHHHHHHHcCCCcHHHHHH-HeecCC---eeEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3446667899999999999999 444443 67999999 6999999995543 4899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
++|+||+|+||+++.++.++|+|||.+....... +
T Consensus 114 ~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~---------------------------------~------------ 148 (250)
T cd05123 114 IIYRDLKPENILLDADGHIKLTDFGLAKELSSEG---------------------------------S------------ 148 (250)
T ss_pred ceecCCCcceEEEcCCCcEEEeecCcceecccCC---------------------------------C------------
Confidence 9999999999999999999999998874321110 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......++..|+|||.+.+...+.++|+||||+++
T Consensus 149 ---------------------------------------------~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~ 183 (250)
T cd05123 149 ---------------------------------------------RTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLL 183 (250)
T ss_pred ---------------------------------------------cccCCcCCccccChHHhCCCCCCchhhHHHHHHHH
Confidence 00113568889999999888889999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCcccccc-CchHHHHHHHcCCCCCCCCCCh---HHHHcCccc
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLK-FPKEASFCLWLLHPEPSGRPKM---GELLQSEFL 364 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~-~p~~~~li~~~L~~dP~~Rpta---~eiL~hp~~ 364 (720)
|+|++ ||...... .....+.... ..+... .....+|+.+||..||+.||++ .++++||||
T Consensus 184 ~~l~~g~~p~~~~~~~-~~~~~~~~~~--~~~~~~~~~~l~~~i~~~l~~~p~~R~~~~~~~~l~~~~~f 250 (250)
T cd05123 184 YEMLTGKPPFYAEDRK-EIYEKILKDP--LRFPEFLSPEARDLISGLLQKDPTKRLGSGGAEEIKAHPFF 250 (250)
T ss_pred HHHHHCCCCCCCCCHH-HHHHHHhcCC--CCCCCCCCHHHHHHHHHHhcCCHhhCCCcccHHHHHhCCCC
Confidence 99999 66544432 2333333221 112222 2344599999999999999999 999999998
No 346
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=99.95 E-value=1.7e-27 Score=246.84 Aligned_cols=199 Identities=15% Similarity=0.151 Sum_probs=153.3
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHHc
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~-~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+...|..++..++||||+++++ ++.+. ...+++||| .+++|.+++.... ..+++..+..++.||+.||.|||++
T Consensus 46 ~~~~e~~~l~~l~~~~i~~~~~-~~~~~---~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~ 121 (256)
T cd05039 46 AFLAEASVMTTLRHPNLVQLLG-VVLQG---NPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEK 121 (256)
T ss_pred HHHHHHHHHHhcCCcceeeeEE-EEcCC---CCeEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 3446778999999999999999 44443 357999999 8899999995433 3589999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004998 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+|+||||+||+++.++.++|+|||.+.......
T Consensus 122 ~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~--------------------------------------------- 156 (256)
T cd05039 122 NFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQ--------------------------------------------- 156 (256)
T ss_pred CccchhcccceEEEeCCCCEEEccccccccccccc---------------------------------------------
Confidence 99999999999999999999999988773321000
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhh
Q 004998 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
....++..|+|||.+.+..++.++|||||||+
T Consensus 157 ------------------------------------------------~~~~~~~~~~ape~~~~~~~~~~~Di~slG~i 188 (256)
T cd05039 157 ------------------------------------------------DSGKLPVKWTAPEALREKKFSTKSDVWSFGIL 188 (256)
T ss_pred ------------------------------------------------ccCCCcccccCchhhcCCcCCcHHHHHHHHHH
Confidence 00123557999999988889999999999999
Q ss_pred hhhccc----cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 301 LFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 301 l~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
+|||++ ||..... ......+.....+ ...... +...+|+.+||..+|++||++.+++.
T Consensus 189 l~~l~~~g~~p~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 251 (256)
T cd05039 189 LWEIYSFGRVPYPRIPL-KDVVPHVEKGYRM-EAPEGCPPEVYKVMKDCWELDPAKRPTFKQLRE 251 (256)
T ss_pred HHHHHhcCCCCCCCCCH-HHHHHHHhcCCCC-CCccCCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence 999986 5544432 2333333333222 222233 44559999999999999999999985
No 347
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=99.95 E-value=3.1e-28 Score=253.76 Aligned_cols=202 Identities=23% Similarity=0.278 Sum_probs=149.8
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.|...+.+++||||+++++ ++.... .+++|||| .+++|.++|... ...+++..+..|+.||+.||.|||+++|+
T Consensus 50 ~e~~~l~~l~h~ni~~~~g-~~~~~~---~~~lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~ii 125 (259)
T PF07714_consen 50 NEIQILRKLRHPNIVKLYG-FCIENE---PLFLVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNII 125 (259)
T ss_dssp HHHHHHHTHSBTTBE-EEE-EEESSS---SEEEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred ecccccccccccccccccc-cccccc---ccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 6777899999999999999 444332 48999999 889999999655 55699999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
|+||+|+||+++.++.+||+|||.+.........
T Consensus 126 H~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~---------------------------------------------- 159 (259)
T PF07714_consen 126 HGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKY---------------------------------------------- 159 (259)
T ss_dssp EST-SGGGEEEETTTEEEEESTTTGEETTTSSSE----------------------------------------------
T ss_pred cccccccccccccccccccccccccccccccccc----------------------------------------------
Confidence 9999999999999999999998877432110000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
. ......+...|+|||.+.+..++.++||||||+++||
T Consensus 160 ----------------------~--------------------~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~e 197 (259)
T PF07714_consen 160 ----------------------K--------------------NDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYE 197 (259)
T ss_dssp ----------------------E--------------------ESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHH
T ss_pred ----------------------c--------------------ccccccccccccccccccccccccccccccccccccc
Confidence 0 0001234678999999988889999999999999999
Q ss_pred ccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 304 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 304 Llt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|++ ||...... .....+.....++..........+++..||+.+|.+||++.+|++
T Consensus 198 i~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~ 257 (259)
T PF07714_consen 198 ILTLGKFPFSDYDNE-EIIEKLKQGQRLPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQ 257 (259)
T ss_dssp HHTTSSGTTTTSCHH-HHHHHHHTTEETTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHH
T ss_pred ccccccccccccccc-cccccccccccceeccchhHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 999 56555333 444455444333322223344559999999999999999999985
No 348
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=99.95 E-value=1.7e-27 Score=245.47 Aligned_cols=206 Identities=18% Similarity=0.237 Sum_probs=160.2
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++++++||||+++++ ++... ..++++||| .+++|.+++... ..+++..+..++.||+.||.|||+.|
T Consensus 45 ~~~~e~~~l~~l~~~~i~~~~~-~~~~~---~~~~~v~e~~~~~~L~~~~~~~-~~l~~~~~~~~~~~i~~~l~~lH~~~ 119 (254)
T cd06627 45 SIMQEIDLLKNLKHPNIVKYIG-SIETS---DSLYIILEYAENGSLRQIIKKF-GPFPESLVAVYVYQVLQGLAYLHEQG 119 (254)
T ss_pred HHHHHHHHHHhCCCCCccEEEE-EEEeC---CEEEEEEecCCCCcHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence 3347777899999999999999 44443 267999999 889999999554 45999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++.++|+|||.+.........
T Consensus 120 i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~-------------------------------------------- 155 (254)
T cd06627 120 VIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKD-------------------------------------------- 155 (254)
T ss_pred cccCCCCHHHEEECCCCCEEEeccccceecCCCccc--------------------------------------------
Confidence 999999999999999999999999887432111000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
.....++..|+|||.+.+..++.++||||||+++
T Consensus 156 ----------------------------------------------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l 189 (254)
T cd06627 156 ----------------------------------------------DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTV 189 (254)
T ss_pred ----------------------------------------------ccccccchhhcCHhhhcCCCCCcchhHHHHHHHH
Confidence 0013568899999999888789999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
|+|++ ||........ +..+.....++......+...+|+.+||..+|++|||+.+++.||||
T Consensus 190 ~~l~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~~ 254 (254)
T cd06627 190 IELLTGNPPYYDLNPMAA-LFRIVQDDHPPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLKHPWI 254 (254)
T ss_pred HHHHhCCCCCCCccHHHH-HHHHhccCCCCCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhcCCCC
Confidence 99999 5554443322 22222333332222223345599999999999999999999999997
No 349
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=99.95 E-value=1.3e-27 Score=254.79 Aligned_cols=202 Identities=16% Similarity=0.132 Sum_probs=154.1
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..|..++..++||||+++++ ++... ..++++|| .+++|.+++......+++..+..++.||+.||.|||++||+
T Consensus 57 ~~e~~~~~~l~h~niv~~~~-~~~~~----~~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~iv 131 (303)
T cd05110 57 MDEALIMASMDHPHLVRLLG-VCLSP----TIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLV 131 (303)
T ss_pred HHHHHHHHhCCCCCcccEEE-EEcCC----CceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCee
Confidence 36777899999999999999 54433 24788999 88999999966555689999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+||+++.++.+||+|||.+......... +
T Consensus 132 H~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~--------------------------------~------------- 166 (303)
T cd05110 132 HRDLAARNVLVKSPNHVKITDFGLARLLEGDEKE--------------------------------Y------------- 166 (303)
T ss_pred ccccccceeeecCCCceEEccccccccccCcccc--------------------------------c-------------
Confidence 9999999999999999999998887432110000 0
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......++..|+|||.+.+..++.++|||||||++||
T Consensus 167 -------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~e 203 (303)
T cd05110 167 -------------------------------------------NADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWE 203 (303)
T ss_pred -------------------------------------------ccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHH
Confidence 0000235678999999988889999999999999999
Q ss_pred ccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 304 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 304 Llt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|++ ||...... .....+..+..++.......+..+++..||..+|++||++.++++
T Consensus 204 l~t~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~ 263 (303)
T cd05110 204 LMTFGGKPYDGIPTR-EIPDLLEKGERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAA 263 (303)
T ss_pred HHhCCCCCCCCCCHH-HHHHHHHCCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 986 56543222 222333333333322233455669999999999999999999876
No 350
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.95 E-value=4.8e-28 Score=282.22 Aligned_cols=249 Identities=14% Similarity=0.191 Sum_probs=184.4
Q ss_pred CcccccccccCCcccccccccCCCCCCcc----------ccccccccCCCCccceeeeehhhhcccCCCCCceeccccee
Q 004998 18 SSDSAWQDSDSSRALNISGVSDRNPRLLR----------GERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVC 87 (720)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~r~~~e~~~Ls~l~HpnIV~l~~~~~ 87 (720)
+..-.|.+..-.+.+|.+.|+...-+... +.-..+....+.......-+|+.+++.++|||||+++|+.+
T Consensus 686 lp~v~~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l 765 (1025)
T KOG1095|consen 686 LPEVPRKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCL 765 (1025)
T ss_pred cccCChhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeec
Confidence 34455677777888888888763222211 00001111111122223338899999999999999999555
Q ss_pred ecCCCCCcEEEEEec-CCCCHHHHHhCC------CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEccCCce
Q 004998 88 ENEAAIDPFVHAIEW-GDVSLRQWLDKP------KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHV 160 (720)
Q Consensus 88 ~~~~~~~~~~lv~E~-~ggsL~~~L~~~------~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~v 160 (720)
. .. ..+|++|| .||+|..||++. ...++..+.+.++.||+.|+.||+++++|||||-..|+||+....|
T Consensus 766 ~-~~---~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r~V 841 (1025)
T KOG1095|consen 766 D-SG---PPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDERRVV 841 (1025)
T ss_pred C-CC---CcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecccCcE
Confidence 4 32 57999999 999999999776 6668999999999999999999999999999999999999999999
Q ss_pred EEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccCCCcccccccccc
Q 004998 161 SFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVE 240 (720)
Q Consensus 161 kliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~ 240 (720)
||.|||+|+|.-.. |+
T Consensus 842 KIaDFGlArDiy~~----------------------------------~y------------------------------ 857 (1025)
T KOG1095|consen 842 KIADFGLARDIYDK----------------------------------DY------------------------------ 857 (1025)
T ss_pred EEcccchhHhhhhc----------------------------------hh------------------------------
Confidence 99999998743111 00
Q ss_pred ccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhccc----cCCCCchHHH
Q 004998 241 GMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTR 316 (720)
Q Consensus 241 ~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~ 316 (720)
+...+ .. +-...|||||.+....++.++|||||||+|||+++ ||........
T Consensus 858 ------yr~~~---------~a---------~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v 913 (1025)
T KOG1095|consen 858 ------YRKHG---------EA---------MLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEV 913 (1025)
T ss_pred ------eeccC---------cc---------ccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHH
Confidence 00000 00 11346999999999889999999999999999999 8888777755
Q ss_pred HHHHhhcCCCCccccccCchHH-HHHHHcCCCCCCCCCChHHHHc
Q 004998 317 TMSSLRHRVLPPQLLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 317 ~~~~l~~~~~p~~~~~~~p~~~-~li~~~L~~dP~~Rpta~eiL~ 360 (720)
+...+..+.+++. ..+|+.. ++|..||+.+|++||++..|++
T Consensus 914 ~~~~~~ggRL~~P--~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~ 956 (1025)
T KOG1095|consen 914 LLDVLEGGRLDPP--SYCPEKLYQLMLQCWKHDPEDRPSFRTIVE 956 (1025)
T ss_pred HHHHHhCCccCCC--CCCChHHHHHHHHHccCChhhCccHHHHHh
Confidence 5445555544432 3555554 9999999999999999999987
No 351
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=99.95 E-value=2.5e-27 Score=247.81 Aligned_cols=202 Identities=17% Similarity=0.219 Sum_probs=146.8
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC---CCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---KRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~---~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+|..+++.++||||+++++ .+.+.. ..|++||| .+++|.+++.+. ...+++..++.++.||+.||.|||+.+
T Consensus 44 ~e~~~~~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~ 119 (268)
T cd05086 44 QQGDPYRILQHPNILQCLG-QCVEAI---PYLLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHN 119 (268)
T ss_pred HHHHHHhccCCcchhheEE-EecCCC---ccEEEEecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC
Confidence 5666788899999999999 554443 57999999 889999999542 234677788999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.++|+|||.+...... ++
T Consensus 120 i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~----------------------------------~~----------- 154 (268)
T cd05086 120 FLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKE----------------------------------DY----------- 154 (268)
T ss_pred eeccCCccceEEEcCCccEEecccccccccCcc----------------------------------hh-----------
Confidence 999999999999999999999988876221000 00
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-------CCCCccccc
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-------APVSCASDI 294 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-------~~~s~~sDI 294 (720)
........|+..|+|||++.. ..++.++||
T Consensus 155 -------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~Di 191 (268)
T cd05086 155 -------------------------------------------IETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNV 191 (268)
T ss_pred -------------------------------------------hhcccCCcCcccccCchhcccccCccccCCCCCcchh
Confidence 000001357889999999853 235789999
Q ss_pred hhhhhhhhhccc----cCCCCchHHHHHHHhhcC---CCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 295 YRLGVLLFELFC----PFSTGEEKTRTMSSLRHR---VLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 295 wSLGvll~eLlt----pf~~~~~~~~~~~~l~~~---~~p~~~~~~~-p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||||++|||++ ||............+... .+.+.+...+ +...+++..|| .+|.+||++.++++
T Consensus 192 wslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~ 264 (268)
T cd05086 192 WALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQLELPYSERWYEVLQFCW-LSPEKRATAEEVHR 264 (268)
T ss_pred HHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCccCCCCcHHHHHHHHHHh-hCcccCCCHHHHHH
Confidence 999999999986 565544432222222221 1223333333 34458999999 67999999999975
No 352
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.95 E-value=1.9e-27 Score=257.19 Aligned_cols=203 Identities=17% Similarity=0.177 Sum_probs=153.2
Q ss_pred eehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC---------------CCCCCHHHHHHHH
Q 004998 65 HSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---------------KRSVDVYECLHIF 127 (720)
Q Consensus 65 ~~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~---------------~~~l~~~~~~~i~ 127 (720)
.+|..++.++ +||||+++++ ++.... .+|++||| .+++|.++|.+. ...++...++.++
T Consensus 65 ~~E~~~l~~l~~h~~iv~~~~-~~~~~~---~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 140 (334)
T cd05100 65 VSEMEMMKMIGKHKNIINLLG-ACTQDG---PLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCA 140 (334)
T ss_pred HHHHHHHHhhcCCCCeeeeeE-EEccCC---ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHH
Confidence 3677788888 8999999999 444432 57999999 899999999532 2247888999999
Q ss_pred HHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccc
Q 004998 128 RQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRR 207 (720)
Q Consensus 128 ~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l 207 (720)
.||+.||.|||++||+||||||+|||++.++.++|+|||.++.......
T Consensus 141 ~qi~~al~~LH~~givH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~------------------------------- 189 (334)
T cd05100 141 YQVARGMEYLASQKCIHRDLAARNVLVTEDNVMKIADFGLARDVHNIDY------------------------------- 189 (334)
T ss_pred HHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCcccceecccccc-------------------------------
Confidence 9999999999999999999999999999999999999988743211100
Q ss_pred cccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC
Q 004998 208 EDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP 287 (720)
Q Consensus 208 ~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~ 287 (720)
+. ......++..|+|||++.+..
T Consensus 190 --~~-------------------------------------------------------~~~~~~~~~~y~aPE~~~~~~ 212 (334)
T cd05100 190 --YK-------------------------------------------------------KTTNGRLPVKWMAPEALFDRV 212 (334)
T ss_pred --cc-------------------------------------------------------cccCCCcCceEcCHHHhccCC
Confidence 00 000013456799999999888
Q ss_pred CCccccchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 288 VSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 288 ~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
++.++|||||||++|||++ ||.... .......+.....++..........+|+.+||+.+|.+||++.|+++
T Consensus 213 ~~~~~Di~slG~il~el~~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~ 288 (334)
T cd05100 213 YTHQSDVWSFGVLLWEIFTLGGSPYPGIP-VEELFKLLKEGHRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVE 288 (334)
T ss_pred cCchhhhHHHHHHHHHHHhcCCCCCCCCC-HHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence 9999999999999999987 454433 23344444433333332233345569999999999999999999986
No 353
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.95 E-value=8.7e-28 Score=251.59 Aligned_cols=221 Identities=19% Similarity=0.244 Sum_probs=159.7
Q ss_pred ehhhhcccCC-CCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 66 SDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~Ls~l~-HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
+|..++.++. ||||+++++ ++.... .++++||| .+++|.+++.+.+ .+++..++.++.||+.||.|||+.|++
T Consensus 50 ~e~~~~~~l~~~~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~i~~ql~~~l~~Lh~~~~~ 124 (280)
T cd05581 50 IEKEVLTRLNGHPGIIKLYY-TFQDEE---NLYFVLEYAPNGELLQYIRKYG-SLDEKCTRFYAAEILLALEYLHSKGII 124 (280)
T ss_pred HHHHHHHhcccCCCchhHHH-HhcCCc---eEEEEEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 5566788888 999999999 444433 57999999 7999999996554 599999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
|+||+|+||+++.++.++++|||.+...+........... . ..++..
T Consensus 125 H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~~~~~~~--------------~--------~~~~~~----------- 171 (280)
T cd05581 125 HRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGD--------------A--------TNIDSQ----------- 171 (280)
T ss_pred ecCCCHHHeEECCCCCEEecCCccccccCCccccccCCCC--------------C--------cccccc-----------
Confidence 9999999999999999999999988654332111000000 0 000000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
............|+..|+|||.+.+..++.++|||||||++|+
T Consensus 172 -------------------------------------~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~ 214 (280)
T cd05581 172 -------------------------------------IEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQ 214 (280)
T ss_pred -------------------------------------ccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHH
Confidence 0000001112467899999999988889999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCCh----HHHHcCccc
Q 004998 304 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKM----GELLQSEFL 364 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rpta----~eiL~hp~~ 364 (720)
|++ ||....... ....+.... ..++..+ +...+|+.+||+.+|.+||++ .++++||||
T Consensus 215 l~~g~~p~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~~~~ 280 (280)
T cd05581 215 MLTGKPPFRGSNEYL-TFQKILKLE--YSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPFF 280 (280)
T ss_pred HHhCCCCCCCccHHH-HHHHHHhcC--CCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcCCCC
Confidence 999 554443322 222222111 1111223 445599999999999999999 999999997
No 354
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=99.95 E-value=1.8e-27 Score=250.06 Aligned_cols=204 Identities=19% Similarity=0.202 Sum_probs=153.8
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC-------CCCCHHHHHHHHHHHHHHHH
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-------RSVDVYECLHIFRQIVEIVY 135 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~-------~~l~~~~~~~i~~QIl~aL~ 135 (720)
..+|..++..++||||+++++.++... ...++++|| .+++|.+++.... ..+++..++.++.||+.||.
T Consensus 55 ~~~e~~~l~~l~h~ni~~~~~~~~~~~---~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~ 131 (280)
T cd05043 55 LLQESCLLYGLSHQNILPILHVCIEDG---EPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMS 131 (280)
T ss_pred HHHHHHHHHhCCCCCCCeEEEEEecCC---CCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHH
Confidence 346777899999999999999433332 256899999 8899999994421 45899999999999999999
Q ss_pred HHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccC
Q 004998 136 AAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTA 215 (720)
Q Consensus 136 yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~ 215 (720)
|||++|++||||||+||+++.++.+|++|||+++..... ++..
T Consensus 132 ~LH~~~i~H~di~p~nil~~~~~~~kl~d~g~~~~~~~~----------------------------------~~~~--- 174 (280)
T cd05043 132 YLHKRGVIHKDIAARNCVIDEELQVKITDNALSRDLFPM----------------------------------DYHC--- 174 (280)
T ss_pred HHHHCCEeecccCHhhEEEcCCCcEEECCCCCcccccCC----------------------------------ceEE---
Confidence 999999999999999999999999999998887432111 0000
Q ss_pred CCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccch
Q 004998 216 PTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIY 295 (720)
Q Consensus 216 ~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIw 295 (720)
. .....++..|+|||++.+..++.++|||
T Consensus 175 -------------------------------~--------------------~~~~~~~~~y~apE~~~~~~~~~~~Di~ 203 (280)
T cd05043 175 -------------------------------L--------------------GDNENRPVKWMALESLVNKEYSSASDVW 203 (280)
T ss_pred -------------------------------e--------------------CCCCCcchhccCHHHHhcCCCCchhhHH
Confidence 0 0001346679999999888899999999
Q ss_pred hhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 296 RLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 296 SLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
||||++|||++ ||...... .....+.....++. ....| ...+++.+||.++|++|||+.++++
T Consensus 204 slG~~l~el~~~g~~p~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 271 (280)
T cd05043 204 SFGVLLWELMTLGQTPYVEIDPF-EMAAYLKDGYRLAQ-PINCPDELFAVMACCWALDPEERPSFSQLVQ 271 (280)
T ss_pred HhHHHHHHHhcCCCCCcCcCCHH-HHHHHHHcCCCCCC-CCcCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 99999999997 56544332 33333333322222 22334 4559999999999999999999985
No 355
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=99.95 E-value=2.4e-27 Score=246.47 Aligned_cols=200 Identities=15% Similarity=0.180 Sum_probs=153.3
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
.+|..++.+++||||+++++ ++... .++++||| .+++|.+++.. .+..+++.+++.++.||+.||.|||+.|+
T Consensus 49 ~~E~~~l~~l~h~~i~~~~~-~~~~~----~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i 123 (260)
T cd05067 49 LAEANLMKQLQHPRLVRLYA-VVTQE----PIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNY 123 (260)
T ss_pred HHHHHHHHhcCCcCeeeEEE-EEccC----CcEEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCe
Confidence 46778999999999999998 44332 47999999 89999999843 34468999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.++++|||.+.........
T Consensus 124 ~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~--------------------------------------------- 158 (260)
T cd05067 124 IHRDLRAANILVSETLCCKIADFGLARLIEDNEYT--------------------------------------------- 158 (260)
T ss_pred ecccccHHhEEEcCCCCEEEccCcceeecCCCCcc---------------------------------------------
Confidence 99999999999999999999998877332110000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......++..|+|||.+.+..++.++|||||||++|
T Consensus 159 --------------------------------------------~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~ 194 (260)
T cd05067 159 --------------------------------------------AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLT 194 (260)
T ss_pred --------------------------------------------cccCCcccccccCHHHhccCCcCcccchHHHHHHHH
Confidence 000023467899999998888999999999999999
Q ss_pred hccc----cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 303 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 303 eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
||++ ||...... .....+.....++. ....| ...+|+.+||..+|++||++++++.
T Consensus 195 el~~~g~~p~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05067 195 EIVTYGRIPYPGMTNP-EVIQNLERGYRMPR-PDNCPEELYELMRLCWKEKPEERPTFEYLRS 255 (260)
T ss_pred HHHhCCCCCCCCCChH-HHHHHHHcCCCCCC-CCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 9997 56544332 33333333322222 22333 4569999999999999999999875
No 356
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=99.95 E-value=2.6e-27 Score=247.54 Aligned_cols=204 Identities=15% Similarity=0.194 Sum_probs=147.5
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC----CCCCCHHHHHHHHHHHHHHHHHHH
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP----KRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~----~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
..+|..++.+++||||+++++ .+.... .+++|||| .+++|.++|... ...+++..++.++.||+.||.|||
T Consensus 42 ~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH 117 (269)
T cd05087 42 FLEEAQPYRSLQHSNLLQCLG-QCTEVT---PYLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLH 117 (269)
T ss_pred HHHHHHHHHhCCCCCEeeEEE-EEcCCC---CcEEEEECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHH
Confidence 346778999999999999999 444432 57999999 889999999432 123567788899999999999999
Q ss_pred HcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCC
Q 004998 139 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
+.|++||||||+||+++.++.++|+|||.+...... ++
T Consensus 118 ~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~----------------------------------~~-------- 155 (269)
T cd05087 118 KNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKE----------------------------------DY-------- 155 (269)
T ss_pred HCCEeccccCcceEEEcCCCcEEECCccccccccCc----------------------------------ce--------
Confidence 999999999999999999999999998877321110 00
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-------CCCcc
Q 004998 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-------PVSCA 291 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-------~~s~~ 291 (720)
........|++.|+|||++.+. .++.+
T Consensus 156 ----------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~ 189 (269)
T cd05087 156 ----------------------------------------------YVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKE 189 (269)
T ss_pred ----------------------------------------------eecCCCcCCcccccCHhHhccccccccccCCCcc
Confidence 0000113567889999998643 25789
Q ss_pred ccchhhhhhhhhccc----cCCCCchHHHHHHHhhc---CCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 292 SDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRH---RVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 292 sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~---~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
+|||||||++|||++ ||............+.. ....+.+.... +...+++..|+ .+|++|||++||+.
T Consensus 190 ~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~ 265 (269)
T cd05087 190 SNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKPRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHL 265 (269)
T ss_pred chhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCCCccCCCCChHHHHHHHHHh-cCcccCCCHHHHHH
Confidence 999999999999986 66554433222222221 11122222222 33458999998 68999999999974
No 357
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.95 E-value=5.1e-28 Score=272.89 Aligned_cols=203 Identities=20% Similarity=0.250 Sum_probs=164.0
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC---------CC----CCCHHHHHHHHH
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---------KR----SVDVYECLHIFR 128 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~---------~~----~l~~~~~~~i~~ 128 (720)
.++||+.+|+.++|||||+|+|++.+.+ ++|+|+|| ..|||.+||+.. +. +++..+.++|+.
T Consensus 535 dF~REaeLla~l~H~nIVrLlGVC~~~~----P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~ 610 (774)
T KOG1026|consen 535 DFRREAELLAELQHPNIVRLLGVCREGD----PLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIAT 610 (774)
T ss_pred HHHHHHHHHHhccCCCeEEEEEEEccCC----eeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHH
Confidence 4448888999999999999999444444 68999999 999999999421 12 388999999999
Q ss_pred HHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccccc
Q 004998 129 QIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRRE 208 (720)
Q Consensus 129 QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~ 208 (720)
||+.|+.||-++.+|||||-..|+||.++-.|||.|||++++.=. +
T Consensus 611 QIAaGM~YLs~~~FVHRDLATRNCLVge~l~VKIsDfGLsRdiYs----------------------------------s 656 (774)
T KOG1026|consen 611 QIAAGMEYLSSHHFVHRDLATRNCLVGENLVVKISDFGLSRDIYS----------------------------------S 656 (774)
T ss_pred HHHHHHHHHHhCcccccchhhhhceeccceEEEecccccchhhhh----------------------------------h
Confidence 999999999999999999999999999999999999999976311 1
Q ss_pred ccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCC
Q 004998 209 DLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV 288 (720)
Q Consensus 209 Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 288 (720)
|+ .+... . -+=...|||||.+..++|
T Consensus 657 DY----------------------------------Yk~~~-----------~---------t~lPIRWMppEsIly~kF 682 (774)
T KOG1026|consen 657 DY----------------------------------YKVRG-----------N---------TLLPIRWMPPESILYGKF 682 (774)
T ss_pred hh----------------------------------hcccC-----------C---------ceeeeecCCHHHhhcCcc
Confidence 11 00000 0 012457999999999999
Q ss_pred Cccccchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHH-HHHHHcCCCCCCCCCChHHHH
Q 004998 289 SCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEA-SFCLWLLHPEPSGRPKMGELL 359 (720)
Q Consensus 289 s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~-~li~~~L~~dP~~Rpta~eiL 359 (720)
+++|||||+||+|||+++ ||.+.... +.+..++.+.+-+. +..+|... +||..||+.+|++||++.||-
T Consensus 683 TteSDVWs~GVvLWEIFsyG~QPy~glSn~-EVIe~i~~g~lL~~-Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~ 756 (774)
T KOG1026|consen 683 TTESDVWSFGVVLWEIFSYGKQPYYGLSNQ-EVIECIRAGQLLSC-PENCPTEVYSLMLECWNENPKRRPSFKEIH 756 (774)
T ss_pred cchhhhhhhhhhhhhhhccccCcccccchH-HHHHHHHcCCcccC-CCCCCHHHHHHHHHHhhcCcccCCCHHHHH
Confidence 999999999999999999 88776554 67778887776443 34555554 999999999999999999984
No 358
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.95 E-value=1.4e-27 Score=266.74 Aligned_cols=210 Identities=17% Similarity=0.225 Sum_probs=156.9
Q ss_pred eeehhhhccc-CCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCC---CHHHHHHHHHHHHHHHHHHHH
Q 004998 64 KHSDGVELTH-GDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSV---DVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 64 ~~~e~~~Ls~-l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l---~~~~~~~i~~QIl~aL~yLHs 139 (720)
..||+..|.. =.|||||++|+ .+......||..|.+..+|.+++......+ .....+.++.|++.||++||+
T Consensus 549 A~rEi~lL~eSD~H~NviRyyc----~E~d~qF~YIalELC~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHs 624 (903)
T KOG1027|consen 549 AQREIQLLQESDEHPNVIRYYC----SEQDRQFLYIALELCACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHS 624 (903)
T ss_pred HHHHHHHHHhccCCCceEEEEe----eccCCceEEEEehHhhhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHh
Confidence 3367767766 45999999999 334445789999999999999996631111 114568899999999999999
Q ss_pred cCceeccCCCCcEEEcc---C--CceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccccccccccc
Q 004998 140 QGIVVHNVRPSCFVMSS---F--NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVT 214 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~---~--~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~ 214 (720)
.+||||||||.||||+. + ..++|.|||+|+..+... ..|
T Consensus 625 l~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~--------------------------------sS~---- 668 (903)
T KOG1027|consen 625 LKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGK--------------------------------SSF---- 668 (903)
T ss_pred cccccccCCCceEEEEccCCCcceeEEecccccccccCCCc--------------------------------chh----
Confidence 99999999999999985 2 357888888885532220 000
Q ss_pred CCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccc
Q 004998 215 APTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDI 294 (720)
Q Consensus 215 ~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDI 294 (720)
. +.....||.+|+|||++....-+.++||
T Consensus 669 ------------------~---------------------------------r~s~~sGt~GW~APE~L~~~~~~~avDi 697 (903)
T KOG1027|consen 669 ------------------S---------------------------------RLSGGSGTSGWQAPEQLREDRKTQAVDI 697 (903)
T ss_pred ------------------h---------------------------------cccCCCCcccccCHHHHhccccCcccch
Confidence 0 0011468999999999999888889999
Q ss_pred hhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCc--hHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 295 YRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFP--KEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 295 wSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p--~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|||||++|+.++ ||...- ....+|..+...-......+ ...+||.+||+++|..||+|.++|.||||-..
T Consensus 698 FslGCvfyYvltgG~HpFGd~~---~R~~NIl~~~~~L~~L~~~~d~eA~dLI~~ml~~dP~~RPsa~~VL~HPlFW~~ 773 (903)
T KOG1027|consen 698 FSLGCVFYYVLTGGSHPFGDSL---ERQANILTGNYTLVHLEPLPDCEAKDLISRMLNPDPQLRPSATDVLNHPLFWDS 773 (903)
T ss_pred hhcCceEEEEecCCccCCCchH---HhhhhhhcCccceeeeccCchHHHHHHHHHhcCCCcccCCCHHHHhCCCccCCh
Confidence 999999999999 665533 33334444443333233333 55699999999999999999999999999886
No 359
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=99.95 E-value=3.1e-27 Score=250.86 Aligned_cols=203 Identities=16% Similarity=0.159 Sum_probs=149.4
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC----------CCCCHHHHHHHHHHHHHH
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK----------RSVDVYECLHIFRQIVEI 133 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~----------~~l~~~~~~~i~~QIl~a 133 (720)
.+|..+|..++||||+++++ ++.... .++++||| .+++|.+++.... ..+++..+..++.||+.|
T Consensus 67 ~~E~~~l~~l~~~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a 142 (296)
T cd05095 67 LKEIKIMSRLKDPNIIRLLA-VCITSD---PLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASG 142 (296)
T ss_pred HHHHHHHHhCCCCCcceEEE-EEecCC---ccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHH
Confidence 36777899999999999999 454443 47999999 8899999995422 236778999999999999
Q ss_pred HHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccc
Q 004998 134 VYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLV 213 (720)
Q Consensus 134 L~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla 213 (720)
|+|||+.||+||||||+|||++.++.++|+|||.+....... .+
T Consensus 143 l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~---------------------------------~~--- 186 (296)
T cd05095 143 MKYLSSLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSGD---------------------------------YY--- 186 (296)
T ss_pred HHHHHHCCeecccCChheEEEcCCCCEEeccCcccccccCCc---------------------------------ce---
Confidence 999999999999999999999999999999988874321100 00
Q ss_pred cCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCcccc
Q 004998 214 TAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASD 293 (720)
Q Consensus 214 ~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sD 293 (720)
.......+++.|+|||...+..++.++|
T Consensus 187 ----------------------------------------------------~~~~~~~~~~~~~~pe~~~~~~~~~~~D 214 (296)
T cd05095 187 ----------------------------------------------------RIQGRAVLPIRWMSWESILLGKFTTASD 214 (296)
T ss_pred ----------------------------------------------------eccCcCcCccccCCHHHHhcCCccchhh
Confidence 0000023467899999988888999999
Q ss_pred chhhhhhhhhccc-----cCCCCchHHHHHHHh-------hcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 294 IYRLGVLLFELFC-----PFSTGEEKTRTMSSL-------RHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 294 IwSLGvll~eLlt-----pf~~~~~~~~~~~~l-------~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
||||||++|||++ ||....... ..... ......+......+...+|+.+||+.||.+||++.+|++
T Consensus 215 iwSlG~~l~el~~~~~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~ 292 (296)
T cd05095 215 VWAFGVTLWEILTLCKEQPYSQLSDEQ-VIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHA 292 (296)
T ss_pred hhHHHHHHHHHHHhCCCCCccccChHH-HHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 9999999999996 554332221 11111 111111221222244559999999999999999999875
No 360
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=99.95 E-value=4e-27 Score=247.50 Aligned_cols=204 Identities=14% Similarity=0.101 Sum_probs=156.8
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++.+++||||+++++ ++.. ...+++||| .+++|.+++......+++..+..++.||+.||+|||++|
T Consensus 55 ~~~~e~~~l~~l~h~~i~~~~~-~~~~----~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ 129 (279)
T cd05057 55 EILDEAYVMASVDHPHVVRLLG-ICLS----SQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKR 129 (279)
T ss_pred HHHHHHHHHHhCCCCCcceEEE-EEec----CceEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3447888999999999999999 5544 257999999 899999999765556999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++.++|+|||.++....... -+
T Consensus 130 i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~~--------------------------------~~----------- 166 (279)
T cd05057 130 LVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEK--------------------------------EY----------- 166 (279)
T ss_pred EEecccCcceEEEcCCCeEEECCCcccccccCccc--------------------------------ce-----------
Confidence 99999999999999999999999988743211100 00
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......++..|+|||.+....++.++|||||||++
T Consensus 167 ---------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l 201 (279)
T cd05057 167 ---------------------------------------------HAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTV 201 (279)
T ss_pred ---------------------------------------------ecCCCcccccccCHHHhhcCCcCchhhHHHHHHHH
Confidence 00001235679999999888899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||...... .....+..+...+..........+++.+||..+|..||++.++++
T Consensus 202 ~el~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~ 263 (279)
T cd05057 202 WELMTFGAKPYEGIPAV-EIPDLLEKGERLPQPPICTIDVYMVLVKCWMIDAESRPTFKELIN 263 (279)
T ss_pred HHHhcCCCCCCCCCCHH-HHHHHHhCCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 99997 55444332 333344443333332333455669999999999999999999875
No 361
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=99.95 E-value=2.5e-27 Score=248.22 Aligned_cols=203 Identities=18% Similarity=0.218 Sum_probs=154.4
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC--------CCCCHHHHHHHHHHHHHHH
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK--------RSVDVYECLHIFRQIVEIV 134 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~--------~~l~~~~~~~i~~QIl~aL 134 (720)
..+|..+|.+++||||+++++ ++.+.. ..|+|||| .+++|.+++.... ..+++..++.++.||+.||
T Consensus 55 ~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l 130 (275)
T cd05046 55 FRRELDMFRKLSHKNVVRLLG-LCREAE---PHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGM 130 (275)
T ss_pred HHHHHHHHHhcCCcceeeeEE-EECCCC---cceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHH
Confidence 346778999999999999999 554433 56999999 8899999995432 1589999999999999999
Q ss_pred HHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccccccccccc
Q 004998 135 YAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVT 214 (720)
Q Consensus 135 ~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~ 214 (720)
.|||+.||+||||||+||+++.++.++++|||.+....... +
T Consensus 131 ~~LH~~~i~H~dlkp~Nili~~~~~~~l~~~~~~~~~~~~~----------------------------------~---- 172 (275)
T cd05046 131 DHLSNARFVHRDLAARNCLVSSQREVKVSLLSLSKDVYNSE----------------------------------Y---- 172 (275)
T ss_pred HHhhhcCcccCcCccceEEEeCCCcEEEcccccccccCccc----------------------------------c----
Confidence 99999999999999999999999999998888763211000 0
Q ss_pred CCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccc
Q 004998 215 APTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDI 294 (720)
Q Consensus 215 ~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDI 294 (720)
. ......++..|+|||.+.+..++.++||
T Consensus 173 ----------~-----------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di 201 (275)
T cd05046 173 ----------Y-----------------------------------------KLRNALIPLRWLAPEAVQEDDFSTKSDV 201 (275)
T ss_pred ----------c-----------------------------------------ccCCceeEEeecChhhhccCCCCchhhH
Confidence 0 0001245677999999988888999999
Q ss_pred hhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCch-HHHHHHHcCCCCCCCCCChHHHHc
Q 004998 295 YRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 295 wSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~-~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||||++|+|++ ||...... .....+.....+.......|. ..+++.+||..+|.+||++.|++.
T Consensus 202 ~slG~~l~~l~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~ 271 (275)
T cd05046 202 WSFGVLMWEVFTQGELPFYGLSDE-EVLNRLQAGKLELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVS 271 (275)
T ss_pred HHHHHHHHHHHhCCCCCccccchH-HHHHHHHcCCcCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 999999999997 56543332 333344433332222233444 459999999999999999999986
No 362
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=99.95 E-value=3.2e-27 Score=244.04 Aligned_cols=201 Identities=20% Similarity=0.272 Sum_probs=155.2
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCC-CCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRS-VDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~-l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.|..++.+++||||+++++ ++... ..++++||| .+++|.+++...... +++..++.++.||+.||.|||+.|++
T Consensus 50 ~e~~~l~~l~~~~i~~~~~-~~~~~---~~~~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~ 125 (258)
T smart00219 50 REARIMRKLDHPNIVKLLG-VCTEE---EPLMIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFI 125 (258)
T ss_pred HHHHHHHhcCCCchheEEE-EEcCC---CeeEEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCee
Confidence 5667888999999999999 44443 257999999 899999999554333 89999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
|+||||+||+++.++.++|+|||.+........ +
T Consensus 126 h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~---------------------------------~------------- 159 (258)
T smart00219 126 HRDLAARNCLVGENLVVKISDFGLSRDLYDDDY---------------------------------Y------------- 159 (258)
T ss_pred ecccccceEEEccCCeEEEcccCCceecccccc---------------------------------c-------------
Confidence 999999999999999999999988743211100 0
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......+++.|+|||.+.+..++.++|||||||++|+
T Consensus 160 -------------------------------------------~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~ 196 (258)
T smart00219 160 -------------------------------------------KKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWE 196 (258)
T ss_pred -------------------------------------------ccccCCCcccccChHHhccCCCCcchhHHHHHHHHHH
Confidence 0000125788999999987779999999999999999
Q ss_pred ccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 304 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 304 Llt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|++ ||... ........+.....++......+...+++.+||..+|++|||+.++++
T Consensus 197 l~~~g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 256 (258)
T smart00219 197 IFTLGESPYPGM-SNEEVLEYLKKGYRLPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVE 256 (258)
T ss_pred HHhCCCCCCCCC-CHHHHHHHHhcCCCCCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHh
Confidence 997 44432 233444444444443333333344569999999999999999999986
No 363
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=4.7e-28 Score=250.66 Aligned_cols=219 Identities=21% Similarity=0.291 Sum_probs=172.7
Q ss_pred hhhccc-CCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCceec
Q 004998 68 GVELTH-GDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 145 (720)
Q Consensus 68 ~~~Ls~-l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHr 145 (720)
..+|+- -+-|.+++++. +|+.-+ .+|+|||| .||+|.-.|.+-++ +.+..+..|+..|+-||-|||++|||.|
T Consensus 400 KrvLAL~~kppFL~qlHS-cFQTmD---RLyFVMEyvnGGDLMyhiQQ~Gk-FKEp~AvFYAaEiaigLFFLh~kgIiYR 474 (683)
T KOG0696|consen 400 KRVLALPGKPPFLVQLHS-CFQTMD---RLYFVMEYVNGGDLMYHIQQVGK-FKEPVAVFYAAEIAIGLFFLHSKGIIYR 474 (683)
T ss_pred hhheecCCCCchHHHHHH-Hhhhhh---heeeEEEEecCchhhhHHHHhcc-cCCchhhhhhHHHHHHhhhhhcCCeeee
Confidence 334554 34677788887 665554 57999999 99999988866665 9999999999999999999999999999
Q ss_pred cCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccccc
Q 004998 146 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 225 (720)
Q Consensus 146 DLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~ 225 (720)
|||.+||||+.+|++||+|||+|+.--.+ -
T Consensus 475 DLKLDNvmLd~eGHiKi~DFGmcKEni~~-------------------------------------~------------- 504 (683)
T KOG0696|consen 475 DLKLDNVMLDSEGHIKIADFGMCKENIFD-------------------------------------G------------- 504 (683)
T ss_pred eccccceEeccCCceEeeecccccccccC-------------------------------------C-------------
Confidence 99999999999999999999998432110 0
Q ss_pred ccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhcc
Q 004998 226 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 305 (720)
Q Consensus 226 ~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLl 305 (720)
.+....+|||.|+|||++...+|+.++|+||+||+|||||
T Consensus 505 ----------------------------------------~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEml 544 (683)
T KOG0696|consen 505 ----------------------------------------VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEML 544 (683)
T ss_pred ----------------------------------------cceeeecCCCcccccceEEecccccchhHHHHHHHHHHHH
Confidence 0011268999999999999999999999999999999999
Q ss_pred c---cCCCCchHHHHHHHhhcCCCCccccccCchHH-HHHHHcCCCCCCCCCC-----hHHHHcCcccCCC-ccchHHHH
Q 004998 306 C---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEA-SFCLWLLHPEPSGRPK-----MGELLQSEFLNEP-RDSMEERE 375 (720)
Q Consensus 306 t---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~-~li~~~L~~dP~~Rpt-----a~eiL~hp~~~~~-~~~l~e~~ 375 (720)
. ||.+.++.........+....| ...++++ ++|..+|.+.|.+|.. -.+|-.||||+.. ++.++.++
T Consensus 545 aGQpPFdGeDE~elF~aI~ehnvsyP---KslSkEAv~ickg~ltK~P~kRLGcg~~ge~di~~H~FFR~iDWek~E~~e 621 (683)
T KOG0696|consen 545 AGQPPFDGEDEDELFQAIMEHNVSYP---KSLSKEAVAICKGLLTKHPGKRLGCGPEGERDIREHPFFRRIDWEKLERRE 621 (683)
T ss_pred cCCCCCCCCCHHHHHHHHHHccCcCc---ccccHHHHHHHHHHhhcCCccccCCCCccccchhhCcchhhccHHHHhhcc
Confidence 9 8888877655444444444332 2335555 9999999999999963 4678899999977 66666666
Q ss_pred HHHHHhhhh
Q 004998 376 AAIELREQI 384 (720)
Q Consensus 376 ~~~~~~e~~ 384 (720)
.++++.+..
T Consensus 622 iqPPfkPk~ 630 (683)
T KOG0696|consen 622 IQPPFKPKI 630 (683)
T ss_pred CCCCCCCcc
Confidence 666666554
No 364
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=99.95 E-value=3.4e-27 Score=245.08 Aligned_cols=202 Identities=14% Similarity=0.157 Sum_probs=154.1
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
.+|..++++++||||+++++ ++.... ..+++||| .+++|.+++... +..+++..++.++.||+.||.|||++||
T Consensus 49 ~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i 124 (261)
T cd05034 49 LQEAQIMKKLRHDKLVQLYA-VCSEEE---PIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNY 124 (261)
T ss_pred HHHHHHHhhCCCCCEeeeee-eeecCC---ceEEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 36778999999999999999 444432 57999999 899999999543 3468999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+|+||||+||+++.++.++++|||.+...+.....
T Consensus 125 ~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~--------------------------------------------- 159 (261)
T cd05034 125 IHRDLAARNILVGENLVCKIADFGLARLIEDDEYT--------------------------------------------- 159 (261)
T ss_pred ccCCcchheEEEcCCCCEEECccccceeccchhhh---------------------------------------------
Confidence 99999999999999999999999877432111000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......++..|+|||.+.+..++.++|||||||++|
T Consensus 160 --------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~ 195 (261)
T cd05034 160 --------------------------------------------AREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLT 195 (261)
T ss_pred --------------------------------------------hhhccCCCccccCHHHhccCCcCchhHHHHHHHHHH
Confidence 000012356799999999888999999999999999
Q ss_pred hccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 303 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 303 eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
||++ ||...... .....+......+......+...+++.+||..+|.+||++.++++
T Consensus 196 ~l~t~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~ 256 (261)
T cd05034 196 EIVTYGRVPYPGMTNR-EVLEQVERGYRMPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQS 256 (261)
T ss_pred HHHhCCCCCCCCCCHH-HHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 9997 56544333 333444333222222222334569999999999999999999874
No 365
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.95 E-value=3.1e-27 Score=247.90 Aligned_cols=205 Identities=20% Similarity=0.271 Sum_probs=154.8
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCceec
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 145 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHr 145 (720)
.|..++..++||||+++++ ++... ..++++|||.+++|.+++.+....+++..++.++.||+.||.|||++||+||
T Consensus 47 ~e~~~l~~~~~~~i~~~~~-~~~~~---~~~~~v~e~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~ 122 (282)
T cd07829 47 REISLLKELKHPNIVKLLD-VIHTE---RKLYLVFEYCDMDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHR 122 (282)
T ss_pred HHHHHHHhcCCCCHHHHHh-hhhcC---CceEEEecCcCcCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcccC
Confidence 5777899999999999999 44443 3689999996679999996654569999999999999999999999999999
Q ss_pred cCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccccc
Q 004998 146 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 225 (720)
Q Consensus 146 DLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~ 225 (720)
||+|+||+++.++.++|+|||.+........ .+
T Consensus 123 ~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~--------------------------------~~--------------- 155 (282)
T cd07829 123 DLKPQNILINRDGVLKLADFGLARAFGIPLR--------------------------------TY--------------- 155 (282)
T ss_pred CCChheEEEcCCCCEEEecCCcccccCCCcc--------------------------------cc---------------
Confidence 9999999999999999999988743211100 00
Q ss_pred ccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-CCCccccchhhhhhhhhc
Q 004998 226 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFEL 304 (720)
Q Consensus 226 ~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGvll~eL 304 (720)
....++..|+|||.+.+. .++.++|||||||++|||
T Consensus 156 -------------------------------------------~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l 192 (282)
T cd07829 156 -------------------------------------------THEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEM 192 (282)
T ss_pred -------------------------------------------CccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHH
Confidence 012457789999999776 689999999999999999
Q ss_pred cc---cCCCCchHHHHHHHhh-------------------cCCCCc--------cccccCchHHHHHHHcCCCCCCCCCC
Q 004998 305 FC---PFSTGEEKTRTMSSLR-------------------HRVLPP--------QLLLKFPKEASFCLWLLHPEPSGRPK 354 (720)
Q Consensus 305 lt---pf~~~~~~~~~~~~l~-------------------~~~~p~--------~~~~~~p~~~~li~~~L~~dP~~Rpt 354 (720)
++ ||.............. ...++. .+....+...+|+.+||..+|++||+
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~ 272 (282)
T cd07829 193 ITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRIS 272 (282)
T ss_pred HhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCC
Confidence 99 4544332211111110 000111 01112234569999999999999999
Q ss_pred hHHHHcCccc
Q 004998 355 MGELLQSEFL 364 (720)
Q Consensus 355 a~eiL~hp~~ 364 (720)
+.+++.||||
T Consensus 273 ~~~~l~~p~~ 282 (282)
T cd07829 273 AKEALKHPYF 282 (282)
T ss_pred HHHHhhCcCC
Confidence 9999999997
No 366
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.95 E-value=2.5e-27 Score=250.47 Aligned_cols=209 Identities=17% Similarity=0.220 Sum_probs=157.1
Q ss_pred eehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 65 HSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 65 ~~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..|..+|.++ +||||+++++ +++.+. .+|++||| .+++|.+++.... .+++..+..++.||+.||.|||+.|+
T Consensus 52 ~~e~~~l~~l~~~~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~al~~lH~~~i 126 (290)
T cd05613 52 RTERQVLEHIRQSPFLVTLHY-AFQTDT---KLHLILDYINGGELFTHLSQRE-RFKEQEVQIYSGEIVLALEHLHKLGI 126 (290)
T ss_pred HHHHHHHHhcccCCChhceee-EeecCC---eEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 3677788888 5999999998 555443 67999999 8999999995543 48999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.++|+|||++.........
T Consensus 127 ~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~--------------------------------------------- 161 (290)
T cd05613 127 IYRDIKLENILLDSNGHVVLTDFGLSKEFHEDEVE--------------------------------------------- 161 (290)
T ss_pred eccCCCHHHeEECCCCCEEEeeCccceeccccccc---------------------------------------------
Confidence 99999999999999999999999887432111000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC--CCCccccchhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA--PVSCASDIYRLGVL 300 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~--~~s~~sDIwSLGvl 300 (720)
......|+..|+|||.+.+. .++.++|||||||+
T Consensus 162 --------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~ 197 (290)
T cd05613 162 --------------------------------------------RAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVL 197 (290)
T ss_pred --------------------------------------------ccccccCCcccCChhhccCCCCCCCccccHHHHHHH
Confidence 00013578899999998754 37889999999999
Q ss_pred hhhccc---cCCCCc---hHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCCc
Q 004998 301 LFELFC---PFSTGE---EKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEPR 368 (720)
Q Consensus 301 l~eLlt---pf~~~~---~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~~ 368 (720)
+|+|++ ||.... ........+.... ++......+...+|+.+||..||++|| ++.+++.||||....
T Consensus 198 l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~ 275 (290)
T cd05613 198 MYELLTGASPFTVDGEKNSQAEISRRILKSE-PPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQKIN 275 (290)
T ss_pred HHHHhcCCCCCCcCCccccHHHHHHHhhccC-CCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcCcccccCC
Confidence 999999 453211 1112222222221 221122234456999999999999997 899999999998863
No 367
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=99.94 E-value=7.1e-27 Score=243.04 Aligned_cols=200 Identities=13% Similarity=0.141 Sum_probs=152.1
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
+|..+++.++|+||+++++ ++.. ..++++||| .+++|.+++.+ ....++...++.++.||+.||.|||+.|++
T Consensus 50 ~e~~~l~~l~~~~i~~~~~-~~~~----~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~ 124 (260)
T cd05073 50 AEANVMKTLQHDKLVKLHA-VVTK----EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYI 124 (260)
T ss_pred HHHHHHHhcCCCCcceEEE-EEcC----CCeEEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 5677899999999999999 4433 257999999 78999999954 344578899999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
|+||||+||+++..+.++|+|||.+.........
T Consensus 125 H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~---------------------------------------------- 158 (260)
T cd05073 125 HRDLRAANILVSASLVCKIADFGLARVIEDNEYT---------------------------------------------- 158 (260)
T ss_pred ccccCcceEEEcCCCcEEECCCcceeeccCCCcc----------------------------------------------
Confidence 9999999999999999999988877332110000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......++..|+|||++.+..++.++|||||||++|+
T Consensus 159 -------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~ 195 (260)
T cd05073 159 -------------------------------------------AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLME 195 (260)
T ss_pred -------------------------------------------cccCCcccccccCHhHhccCCcCccccchHHHHHHHH
Confidence 0000234667999999988889999999999999999
Q ss_pred ccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 304 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 304 Llt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|++ ||...... .....+......+..........+++.+||+++|++||++.+++.
T Consensus 196 l~t~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05073 196 IVTYGRIPYPGMSNP-EVIRALERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQS 255 (260)
T ss_pred HHhcCCCCCCCCCHH-HHHHHHhCCCCCCCcccCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence 997 56544332 333334433322222223334559999999999999999998864
No 368
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.94 E-value=1.9e-28 Score=241.70 Aligned_cols=228 Identities=17% Similarity=0.183 Sum_probs=170.8
Q ss_pred CccccccccccCCCCccceeeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHh----CCCCCCC
Q 004998 44 LLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLD----KPKRSVD 119 (720)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~----~~~~~l~ 119 (720)
.-+++||...-......+++.+-|. +++.-+.||||++||+.|..++ +|+.||++..+|..+.+ .....++
T Consensus 91 ~mAVKrIr~~n~~keq~rll~e~d~-~mks~~cp~IVkfyGa~F~EGd----cWiCMELMd~SlDklYk~vy~vq~~~ip 165 (361)
T KOG1006|consen 91 LMAVKRIRSNNIEKEQKRLLMEHDT-VMKSSNCPNIVKFYGALFSEGD----CWICMELMDISLDKLYKRVYSVQKSRIP 165 (361)
T ss_pred EEEEEEeeeccchHHHHHHHHHHHH-HHhhcCCcHHHHHhhhhhcCCc----eeeeHHHHhhhHHHHHHHHHHHHhccCc
Confidence 3456666666654455566666554 4455689999999998776664 78999999889877652 1233489
Q ss_pred HHHHHHHHHHHHHHHHHHHH-cCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhh
Q 004998 120 VYECLHIFRQIVEIVYAAHS-QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDM 198 (720)
Q Consensus 120 ~~~~~~i~~QIl~aL~yLHs-~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (720)
|...-+|..-.+.||+||-. ..|||||+||+|||++..|.|||||||+|-+.-
T Consensus 166 E~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv-------------------------- 219 (361)
T KOG1006|consen 166 ENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLV-------------------------- 219 (361)
T ss_pred HhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecccchHhHH--------------------------
Confidence 99999999999999999996 689999999999999999999999999982210
Q ss_pred HhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCccc
Q 004998 199 LQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYA 278 (720)
Q Consensus 199 ~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~ 278 (720)
|- . ..+.-.|...||
T Consensus 220 ----------~S-i------------------------------------------------------AkT~daGCrpYm 234 (361)
T KOG1006|consen 220 ----------DS-I------------------------------------------------------AKTVDAGCRPYM 234 (361)
T ss_pred ----------HH-H------------------------------------------------------HhhhccCCcccc
Confidence 00 0 011135788999
Q ss_pred CCccccCC--CCCccccchhhhhhhhhccc---cCCCCchHHHHHHHhhcCCCCcccc-----ccCchHHHHHHHcCCCC
Q 004998 279 SPEELAGA--PVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLL-----LKFPKEASFCLWLLHPE 348 (720)
Q Consensus 279 APE~l~~~--~~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~-----~~~p~~~~li~~~L~~d 348 (720)
|||-+... .|+-+||+||||++|||+.| ||..++........+..+.+|.-.. ....+...||.-||.+|
T Consensus 235 APERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~gdpp~l~~~~~~~~~s~~~~~fintCl~Kd 314 (361)
T KOG1006|consen 235 APERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVIGDPPILLFDKECVHYSFSMVRFINTCLIKD 314 (361)
T ss_pred ChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHcCCCCeecCcccccccCHHHHHHHHHHhhcc
Confidence 99999543 38999999999999999999 5555554444444444443332221 13345569999999999
Q ss_pred CCCCCChHHHHcCcccCCC
Q 004998 349 PSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 349 P~~Rpta~eiL~hp~~~~~ 367 (720)
-+.||...+++.+||+...
T Consensus 315 ~~~Rpky~~Lk~~~fyr~y 333 (361)
T KOG1006|consen 315 RSDRPKYDDLKKFPFYRMY 333 (361)
T ss_pred cccCcchhhhhcCchhhhh
Confidence 9999999999999999876
No 369
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=99.94 E-value=6.1e-27 Score=259.27 Aligned_cols=204 Identities=15% Similarity=0.181 Sum_probs=154.4
Q ss_pred eehhhhcccCC-CCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC---------------------------
Q 004998 65 HSDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK--------------------------- 115 (720)
Q Consensus 65 ~~e~~~Ls~l~-HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~--------------------------- 115 (720)
..|..+|.++. |||||++++ .+.... .+++|||| .+++|.++|.+..
T Consensus 88 ~~E~~~l~~l~~H~niv~~~~-~~~~~~---~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (401)
T cd05107 88 MSELKIMSHLGPHLNIVNLLG-ACTKGG---PIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQ 163 (401)
T ss_pred HHHHHHHHhcCCCCCeEEEEE-EEccCC---CcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccc
Confidence 36788999997 999999999 554433 57999999 9999999994321
Q ss_pred ----------------------------------------------------------------------CCCCHHHHHH
Q 004998 116 ----------------------------------------------------------------------RSVDVYECLH 125 (720)
Q Consensus 116 ----------------------------------------------------------------------~~l~~~~~~~ 125 (720)
..+++..++.
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 243 (401)
T cd05107 164 RKSHVSLGSESDGGYMDMSKDESADYVPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVG 243 (401)
T ss_pred cccchhhhhccCccccccCCccccCccchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHH
Confidence 1356778899
Q ss_pred HHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcc
Q 004998 126 IFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRL 205 (720)
Q Consensus 126 i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 205 (720)
|+.||+.||.|||+.||+||||||+|||++.++.++|+|||++.......
T Consensus 244 ~~~qi~~aL~~LH~~~ivHrdlkp~NiLl~~~~~~kL~DfGla~~~~~~~------------------------------ 293 (401)
T cd05107 244 FSYQVANGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMRDS------------------------------ 293 (401)
T ss_pred HHHHHHHHHHHHhcCCcCcccCCcceEEEeCCCEEEEEecCcceeccccc------------------------------
Confidence 99999999999999999999999999999999999999998874321100
Q ss_pred cccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC
Q 004998 206 RREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG 285 (720)
Q Consensus 206 ~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 285 (720)
.+ .......+++.|+|||.+.+
T Consensus 294 ---~~-------------------------------------------------------~~~~~~~~~~~y~aPE~~~~ 315 (401)
T cd05107 294 ---NY-------------------------------------------------------ISKGSTFLPLKWMAPESIFN 315 (401)
T ss_pred ---cc-------------------------------------------------------ccCCCcCCCCceeChHHhcC
Confidence 00 00001246788999999988
Q ss_pred CCCCccccchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 286 APVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 286 ~~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
..++.++|||||||++|||++ ||............+..+..++......+...+|+.+||+++|.+||++.+|++
T Consensus 316 ~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~ 394 (401)
T cd05107 316 NLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFYNAIKRGYRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVH 394 (401)
T ss_pred CCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 889999999999999999997 565443333333334333222222223345569999999999999999999986
No 370
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=99.94 E-value=1.2e-26 Score=243.59 Aligned_cols=206 Identities=21% Similarity=0.245 Sum_probs=151.8
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..|..+++.+.||||+++++ ++... .....+++||| .+++|.+++......+++..++.++.||+.||.|||+.||+
T Consensus 54 ~~ei~~l~~l~~~~i~~~~~-~~~~~-~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~ 131 (284)
T cd05038 54 EREIEILRTLDHENIVKYKG-VCEKP-GGRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRYI 131 (284)
T ss_pred HHHHHHHHhCCCCChheEEe-eeecC-CCCceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 36667899999999999998 44432 23367999999 89999999966555699999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
|+||||+||+++.++.++|+|||.+....... ++
T Consensus 132 H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~---------------------------------~~------------- 165 (284)
T cd05038 132 HRDLAARNILVESEDLVKISDFGLAKVLPEDK---------------------------------DY------------- 165 (284)
T ss_pred cCCCCHHhEEEcCCCCEEEcccccccccccCC---------------------------------cc-------------
Confidence 99999999999999999999998874332110 00
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
.. ......++..|+|||.+.+..++.++|||||||++||
T Consensus 166 ----------------------------------------~~-~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~e 204 (284)
T cd05038 166 ----------------------------------------YY-VKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYE 204 (284)
T ss_pred ----------------------------------------ee-ccCCCCCcccccCcHHHccCCCCcccchHHHhhhhhe
Confidence 00 0000134567999999988889999999999999999
Q ss_pred ccc---cCCCCchH--------------HHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 304 LFC---PFSTGEEK--------------TRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 304 Llt---pf~~~~~~--------------~~~~~~l~~~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|++ ||...... ......+......+. .... ....+|+.+||.++|.+|||+.|+++
T Consensus 205 l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 278 (284)
T cd05038 205 LFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKEGERLPR-PPSCPDEVYDLMKLCWEAEPQDRPSFADLIL 278 (284)
T ss_pred eeccCCCcccccchhccccccccccccHHHHHHHHHcCCcCCC-CccCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 999 43322111 111112222221111 1223 34559999999999999999999985
No 371
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.94 E-value=8.1e-27 Score=268.05 Aligned_cols=188 Identities=16% Similarity=0.199 Sum_probs=129.2
Q ss_pred CCcEEEEEec-CCCCHHHHHhCCCCC-------------------CCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcE
Q 004998 93 IDPFVHAIEW-GDVSLRQWLDKPKRS-------------------VDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCF 152 (720)
Q Consensus 93 ~~~~~lv~E~-~ggsL~~~L~~~~~~-------------------l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NI 152 (720)
...+++|||| .+++|.+++...... .....+..|+.||+.||.|||++||+||||||+||
T Consensus 207 ~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLKP~NI 286 (566)
T PLN03225 207 EDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVKPQNI 286 (566)
T ss_pred CCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCCHHHE
Confidence 3468999999 899999998543211 12345678999999999999999999999999999
Q ss_pred EEcc-CCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccCCCc
Q 004998 153 VMSS-FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSA 231 (720)
Q Consensus 153 Ll~~-~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~ 231 (720)
|++. ++.+||+|||++....... +.
T Consensus 287 Ll~~~~~~~KL~DFGlA~~l~~~~---------------------------------~~--------------------- 312 (566)
T PLN03225 287 IFSEGSGSFKIIDLGAAADLRVGI---------------------------------NY--------------------- 312 (566)
T ss_pred EEeCCCCcEEEEeCCCcccccccc---------------------------------cc---------------------
Confidence 9985 5789999999884321100 00
Q ss_pred cccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC----------------------CC
Q 004998 232 YGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP----------------------VS 289 (720)
Q Consensus 232 ~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~----------------------~s 289 (720)
.....+||+.|+|||.+.... ++
T Consensus 313 -----------------------------------~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~ 357 (566)
T PLN03225 313 -----------------------------------IPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLP 357 (566)
T ss_pred -----------------------------------CCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCC
Confidence 001146788999999764322 34
Q ss_pred ccccchhhhhhhhhccccCCC-CchHHHHHHHhhcCCC---------Ccccccc-----------CchHHHHHHHcCCCC
Q 004998 290 CASDIYRLGVLLFELFCPFST-GEEKTRTMSSLRHRVL---------PPQLLLK-----------FPKEASFCLWLLHPE 348 (720)
Q Consensus 290 ~~sDIwSLGvll~eLltpf~~-~~~~~~~~~~l~~~~~---------p~~~~~~-----------~p~~~~li~~~L~~d 348 (720)
.++|||||||+||||++|... ..........+..... ++..... .....+||.+||++|
T Consensus 358 ~k~DVwSlGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~d 437 (566)
T PLN03225 358 DRFDIYSAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFK 437 (566)
T ss_pred CCcccHHHHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCC
Confidence 456999999999999995433 2222222222221111 1110000 111238999999999
Q ss_pred CCCCCChHHHHcCcccCCCcc
Q 004998 349 PSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 349 P~~Rpta~eiL~hp~~~~~~~ 369 (720)
|.+|||+.++|+||||.....
T Consensus 438 P~kR~ta~e~L~Hpff~~~~~ 458 (566)
T PLN03225 438 GRQRISAKAALAHPYFDREGL 458 (566)
T ss_pred cccCCCHHHHhCCcCcCCCCc
Confidence 999999999999999987633
No 372
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.94 E-value=7.5e-27 Score=246.62 Aligned_cols=210 Identities=18% Similarity=0.214 Sum_probs=156.6
Q ss_pred eeehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 64 KHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 64 ~~~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
...|..++.++ +||||+++++ .+..+. .+|+|||| .+++|.+++... ..+++..++.++.|++.||.|||+.|
T Consensus 51 ~~~E~~~l~~~~~~~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~ 125 (288)
T cd05583 51 TRTERQVLEAVRRCPFLVTLHY-AFQTDT---KLHLILDYVNGGELFTHLYQR-EHFTESEVRVYIAEIVLALDHLHQLG 125 (288)
T ss_pred HHHHHHHHHhccCCcchhhhhe-eeecCC---EEEEEEecCCCCcHHHHHhhc-CCcCHHHHHHHHHHHHHHHHHHHHCC
Confidence 34677788888 6999999998 444433 57999999 889999999544 34899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
++||||||+||+++.++.++++|||++..+.... ..
T Consensus 126 ~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~---------------------------------~~----------- 161 (288)
T cd05583 126 IIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEE---------------------------------EE----------- 161 (288)
T ss_pred eeccCCCHHHeEECCCCCEEEEECcccccccccc---------------------------------cc-----------
Confidence 9999999999999999999999998874321110 00
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC--CCccccchhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP--VSCASDIYRLGV 299 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~--~s~~sDIwSLGv 299 (720)
......|+..|+|||.+.+.. .+.++||||||+
T Consensus 162 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~ 196 (288)
T cd05583 162 ---------------------------------------------RAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGV 196 (288)
T ss_pred ---------------------------------------------ccccccCCccccCHHHhcCCCCCCcchhhhHHHHH
Confidence 000135788999999987765 788999999999
Q ss_pred hhhhccc---cCCCCch---HHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCC---hHHHHcCcccCCCc
Q 004998 300 LLFELFC---PFSTGEE---KTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK---MGELLQSEFLNEPR 368 (720)
Q Consensus 300 ll~eLlt---pf~~~~~---~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpt---a~eiL~hp~~~~~~ 368 (720)
++|||++ ||..... .......+.... ++......+...+|+.+||+.+|++||| +.++|+||||+...
T Consensus 197 il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~~~~~~~ 273 (288)
T cd05583 197 LTFELLTGASPFTVDGEQNSQSEISRRILKSK-PPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHPFFQGID 273 (288)
T ss_pred HHHHHHhCCCCcccCcccchHHHHHHHHHccC-CCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCcccccCC
Confidence 9999999 5532211 111112222221 2221222345569999999999999998 56789999998863
No 373
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=99.94 E-value=1e-27 Score=259.98 Aligned_cols=201 Identities=18% Similarity=0.243 Sum_probs=158.4
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|...|++-+|.||+=+.| ++..+. +.||.-+ .|-+|..+|.-...+|.....+.|++||++|++|||.++|||
T Consensus 437 nEVa~lkkTRH~NIlLFMG-~~~~p~----~AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~IIH 511 (678)
T KOG0193|consen 437 NEVAVLKKTRHENILLFMG-ACMNPP----LAIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNIIH 511 (678)
T ss_pred HHHHHHhhcchhhheeeeh-hhcCCc----eeeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhhhh
Confidence 6777999999999999999 554442 4788888 999999999666667999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
||||..||+|.+++.|||.|||++.....-. ++-
T Consensus 512 rDLKSnNIFl~~~~kVkIgDFGLatvk~~w~--------------------------------g~~-------------- 545 (678)
T KOG0193|consen 512 RDLKSNNIFLHEDLKVKIGDFGLATVKTRWS--------------------------------GEQ-------------- 545 (678)
T ss_pred hhccccceEEccCCcEEEecccceeeeeeec--------------------------------ccc--------------
Confidence 9999999999999999998777763211100 000
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC---CCCccccchhhhhhh
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA---PVSCASDIYRLGVLL 301 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~---~~s~~sDIwSLGvll 301 (720)
.....-|...|||||+++.. +|++.+|||||||++
T Consensus 546 ------------------------------------------q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~ 583 (678)
T KOG0193|consen 546 ------------------------------------------QLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVW 583 (678)
T ss_pred ------------------------------------------ccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHH
Confidence 00012467789999999644 499999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCcc---ccccCchH-HHHHHHcCCCCCCCCCChHHHHc
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQ---LLLKFPKE-ASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~---~~~~~p~~-~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||. ......++-.+..+.+.+. .....|++ .+|+..||.+++++||...+||.
T Consensus 584 YELltg~lPys-i~~~dqIifmVGrG~l~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~ 648 (678)
T KOG0193|consen 584 YELLTGELPYS-IQNRDQIIFMVGRGYLMPDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLS 648 (678)
T ss_pred HHHHhCcCCcC-CCChhheEEEecccccCccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHH
Confidence 99999 887 4444455555555644443 34566744 49999999999999999999986
No 374
>PHA02882 putative serine/threonine kinase; Provisional
Probab=99.94 E-value=1.2e-26 Score=246.57 Aligned_cols=205 Identities=14% Similarity=0.112 Sum_probs=148.9
Q ss_pred hhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCC
Q 004998 69 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 148 (720)
Q Consensus 69 ~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLK 148 (720)
..+..+.|+||+++++............++++|+...++.+.+... ...++..++.++.||+.||+|||++||+|||||
T Consensus 75 ~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiK 153 (294)
T PHA02882 75 KNIHNIDHLGIPKYYGCGSFKRCRMYYRFILLEKLVENTKEIFKRI-KCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIK 153 (294)
T ss_pred HHhccCCCCCCCcEEEeeeEecCCceEEEEEEehhccCHHHHHHhh-ccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCC
Confidence 3456789999999998444444444456888888667888877443 336888999999999999999999999999999
Q ss_pred CCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccC
Q 004998 149 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 228 (720)
Q Consensus 149 P~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~ 228 (720)
|+|||++.++.++|+|||+++.+...... ...
T Consensus 154 p~Nill~~~~~~~l~DFGla~~~~~~~~~------------------------------~~~------------------ 185 (294)
T PHA02882 154 PENIMVDGNNRGYIIDYGIASHFIIHGKH------------------------------IEY------------------ 185 (294)
T ss_pred HHHEEEcCCCcEEEEEcCCceeeccCCcc------------------------------ccc------------------
Confidence 99999999999999999988543211000 000
Q ss_pred CCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhccc--
Q 004998 229 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 306 (720)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt-- 306 (720)
.........||+.|+|||++.+..++.++|||||||++|||++
T Consensus 186 -----------------------------------~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~ 230 (294)
T PHA02882 186 -----------------------------------SKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIK 230 (294)
T ss_pred -----------------------------------ccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCC
Confidence 0000011368999999999999989999999999999999998
Q ss_pred -cCCCCchHHHH--------HHHhhcCCCCccccccCch-HHHHHHHcCCCCCCCCCChHHHHc
Q 004998 307 -PFSTGEEKTRT--------MSSLRHRVLPPQLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 307 -pf~~~~~~~~~--------~~~l~~~~~p~~~~~~~p~-~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
||......... ...+..... .....|+ ..+++..|+..+|++||++.++++
T Consensus 231 ~P~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~ 291 (294)
T PHA02882 231 LPWKGFGHNGNLIHAAKCDFIKRLHEGKI---KIKNANKFIYDFIECVTKLSYEEKPDYDALIK 291 (294)
T ss_pred CCCCccccchHHHHHhHHHHHHHhhhhhh---ccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence 77654222111 122222111 1122344 449999999999999999999975
No 375
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=99.94 E-value=2.3e-26 Score=240.55 Aligned_cols=207 Identities=13% Similarity=0.087 Sum_probs=151.7
Q ss_pred eehhhhcccCCCCCceecccceeecCC--CCCcEEEEEec-CCCCHHHHHhC-----CCCCCCHHHHHHHHHHHHHHHHH
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEA--AIDPFVHAIEW-GDVSLRQWLDK-----PKRSVDVYECLHIFRQIVEIVYA 136 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~--~~~~~~lv~E~-~ggsL~~~L~~-----~~~~l~~~~~~~i~~QIl~aL~y 136 (720)
.+|..+|+.++||||+++++....... .....++++|| .+++|.+++.. ....++...++.++.||+.||+|
T Consensus 49 ~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~ 128 (273)
T cd05074 49 LREAACMKEFDHPNVIKLIGVSLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEY 128 (273)
T ss_pred HHHHHHHhcCCCCCcceEEEEEccCCCCCcccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 367789999999999999994333222 12245788999 88999988731 12247899999999999999999
Q ss_pred HHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCC
Q 004998 137 AHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 216 (720)
Q Consensus 137 LHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~ 216 (720)
||+.||+||||||+||+++.++.++++|||.+......... .
T Consensus 129 lH~~~i~H~dikp~nili~~~~~~kl~dfg~~~~~~~~~~~--------------------------------~------ 170 (273)
T cd05074 129 LSSKNFIHRDLAARNCMLNENMTVCVADFGLSKKIYSGDYY--------------------------------R------ 170 (273)
T ss_pred HHhCCEeecccchhhEEEcCCCCEEECcccccccccCCcce--------------------------------e------
Confidence 99999999999999999999999999998877432111000 0
Q ss_pred CCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchh
Q 004998 217 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYR 296 (720)
Q Consensus 217 ~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwS 296 (720)
......+++.|++||.+.+..++.++||||
T Consensus 171 --------------------------------------------------~~~~~~~~~~~~~pe~~~~~~~~~~sDi~s 200 (273)
T cd05074 171 --------------------------------------------------QGCASKLPVKWLALESLADNVYTTHSDVWA 200 (273)
T ss_pred --------------------------------------------------cCCCccCchhhcCHhHHhcCccchhhhhHH
Confidence 000013456799999998888999999999
Q ss_pred hhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 297 LGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 297 LGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++|||++ ||..... ......+.............+...+++.+||..+|++||++.++++
T Consensus 201 lG~il~el~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~ 267 (273)
T cd05074 201 FGVTMWEIMTRGQTPYAGVEN-SEIYNYLIKGNRLKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRD 267 (273)
T ss_pred HHHHHHHHhhCCCCCCCCCCH-HHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 9999999997 4443333 2333333333222222233345569999999999999999999986
No 376
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=99.94 E-value=2.3e-26 Score=240.14 Aligned_cols=199 Identities=16% Similarity=0.235 Sum_probs=152.2
Q ss_pred ehhhhcc-cCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHh---CCCCCCCHHHHHHHHHHHHHHHHHHHH-
Q 004998 66 SDGVELT-HGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLD---KPKRSVDVYECLHIFRQIVEIVYAAHS- 139 (720)
Q Consensus 66 ~e~~~Ls-~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~---~~~~~l~~~~~~~i~~QIl~aL~yLHs- 139 (720)
.|..++. .++||||+++++ ++..+. ..+++||| .|++|.+++. .....+++..++.++.||+.||.|||+
T Consensus 57 ~e~~~l~~~~~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~ 132 (269)
T cd08528 57 SEVTIIKEQLRHPNIVRYYK-TFLEND---RLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKE 132 (269)
T ss_pred HHHHHHhhcCCCCCeeeEEe-eEccCC---eEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccC
Confidence 5555555 489999999999 444432 68999999 8999999882 334558999999999999999999996
Q ss_pred cCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004998 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
.||+|+||||+||+++.++.++|+|||.+.......
T Consensus 133 ~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~-------------------------------------------- 168 (269)
T cd08528 133 KRIVHRDLTPNNIMLGEDDKVTITDFGLAKQKQPES-------------------------------------------- 168 (269)
T ss_pred CceeecCCCHHHEEECCCCcEEEecccceeeccccc--------------------------------------------
Confidence 789999999999999999999999998873321100
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhh
Q 004998 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
......|+..|+|||.+.+..++.++|||||||
T Consensus 169 -----------------------------------------------~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ 201 (269)
T cd08528 169 -----------------------------------------------KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGC 201 (269)
T ss_pred -----------------------------------------------ccccccCcccCcChhhhcCCCCchHHHHHHHHH
Confidence 000135788899999999888999999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhcCCCCcccc-ccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 300 LLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLL-LKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~-~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
++|||++ ||...... .....+.....++... ...+...+|+.+||..||++||++.|+..
T Consensus 202 ll~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~ 265 (269)
T cd08528 202 ILYQMCTLQPPFYSTNML-SLATKIVEAVYEPLPEGMYSEDVTDVITSCLTPDAEARPDIIQVSA 265 (269)
T ss_pred HHHHHHhCCCcccccCHH-HHHHHHhhccCCcCCcccCCHHHHHHHHHHCCCCCccCCCHHHHHH
Confidence 9999999 55443332 2333333333333322 22345569999999999999999999875
No 377
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.94 E-value=2.3e-27 Score=239.91 Aligned_cols=217 Identities=18% Similarity=0.289 Sum_probs=167.0
Q ss_pred cCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCc
Q 004998 73 HGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSC 151 (720)
Q Consensus 73 ~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~N 151 (720)
.-+||.+|.+.. +|+.+. .+++|.|| .||+|.-.+ +..++++++.++.+...|+.||.|||++|||.||||.+|
T Consensus 307 asn~pflvglhs-cfqtes---rlffvieyv~ggdlmfhm-qrqrklpeeharfys~ei~lal~flh~rgiiyrdlkldn 381 (593)
T KOG0695|consen 307 ASNNPFLVGLHS-CFQTES---RLFFVIEYVNGGDLMFHM-QRQRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDN 381 (593)
T ss_pred ccCCCeEEehhh-hhcccc---eEEEEEEEecCcceeeeh-hhhhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccc
Confidence 468999999999 776665 57999999 999998777 445669999999999999999999999999999999999
Q ss_pred EEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccCCCc
Q 004998 152 FVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSA 231 (720)
Q Consensus 152 ILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~ 231 (720)
+|++..|++||.|+|.|+.--.+ +|.
T Consensus 382 vlldaeghikltdygmcke~l~~---------------------------------gd~--------------------- 407 (593)
T KOG0695|consen 382 VLLDAEGHIKLTDYGMCKEGLGP---------------------------------GDT--------------------- 407 (593)
T ss_pred eEEccCCceeecccchhhcCCCC---------------------------------Ccc---------------------
Confidence 99999999999999999542111 221
Q ss_pred cccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhccc---cC
Q 004998 232 YGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PF 308 (720)
Q Consensus 232 ~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt---pf 308 (720)
....+|||.|+|||+++|..|++++|+|+|||++|||+. ||
T Consensus 408 ------------------------------------tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspf 451 (593)
T KOG0695|consen 408 ------------------------------------TSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPF 451 (593)
T ss_pred ------------------------------------cccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCc
Confidence 012689999999999999999999999999999999998 76
Q ss_pred CC------C-chHHHHHHHhh-cCCCCccccccCchHHHHHHHcCCCCCCCCC------ChHHHHcCcccCCC-ccchHH
Q 004998 309 ST------G-EEKTRTMSSLR-HRVLPPQLLLKFPKEASFCLWLLHPEPSGRP------KMGELLQSEFLNEP-RDSMEE 373 (720)
Q Consensus 309 ~~------~-~~~~~~~~~l~-~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rp------ta~eiL~hp~~~~~-~~~l~e 373 (720)
.- . +...-.+..+. +.+.-|. +..-+...+++..|.+||.+|. ...++..|+||+.. ++.+++
T Consensus 452 divgm~n~d~ntedylfqvilekqiripr--slsvkas~vlkgflnkdp~erlgc~~~~g~~dik~h~ffr~idwd~leq 529 (593)
T KOG0695|consen 452 DIVGMDNPDMNTEDYLFQVILEKQIRIPR--SLSVKASHVLKGFLNKDPKERLGCRPQTGFSDIKSHAFFRSIDWDLLEQ 529 (593)
T ss_pred ceecCCCcccchhHHHHHHHhhhcccccc--eeehhhHHHHHHhhcCCcHHhcCCCcccchhhhhcchhhhhCCHHHHhh
Confidence 42 1 12222333333 3332222 2234556899999999999995 47899999999976 455555
Q ss_pred HHHHHHHhhhhhH
Q 004998 374 REAAIELREQIDE 386 (720)
Q Consensus 374 ~~~~~~~~e~~~~ 386 (720)
+.-.+++.+.+..
T Consensus 530 k~v~ppf~p~i~~ 542 (593)
T KOG0695|consen 530 KQVLPPFQPQITD 542 (593)
T ss_pred cccCCCCCCcccc
Confidence 5555555555544
No 378
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.94 E-value=4e-26 Score=232.23 Aligned_cols=204 Identities=24% Similarity=0.293 Sum_probs=159.9
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..|...+++++|+||+++++ .+... ...++++|| .+++|.+++..... ++...++.++.+|+.+|.|||+.||+
T Consensus 35 ~~e~~~~~~l~~~~i~~~~~-~~~~~---~~~~l~~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~l~~~l~~lh~~~i~ 109 (244)
T smart00220 35 LREISILKKLKHPNIVRLYD-VFEDE---DKLYLVMEYCDGGDLFDLLKKRGR-LSEDEARFYARQILSALEYLHSNGII 109 (244)
T ss_pred HHHHHHHHhCCCCcHHHHHh-heeeC---CEEEEEEeCCCCCCHHHHHHhccC-CCHHHHHHHHHHHHHHHHHHHHcCee
Confidence 36667888999999999999 44333 267999999 77799999955433 89999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
|+||+|.||+++.++.++++|||.+.......
T Consensus 110 h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~------------------------------------------------ 141 (244)
T smart00220 110 HRDLKPENILLDEDGHVKLADFGLARQLDPGG------------------------------------------------ 141 (244)
T ss_pred cCCcCHHHeEECCCCcEEEccccceeeecccc------------------------------------------------
Confidence 99999999999999999999998873321110
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......++..|+|||.+.+..++.++||||||+++|+
T Consensus 142 -------------------------------------------~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~ 178 (244)
T smart00220 142 -------------------------------------------LLTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYE 178 (244)
T ss_pred -------------------------------------------ccccccCCcCCCCHHHHccCCCCchhhHHHHHHHHHH
Confidence 0001356888999999988888999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCCCCccccc--cCchHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004998 304 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLL--KFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~~~p~~~~~--~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
|++ ||............+.....+..... ......+++.+||..+|++||++.++++||||
T Consensus 179 l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~~~~~ 244 (244)
T smart00220 179 LLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEWKISPEAKDLIRKLLVKDPEKRLTAEEALQHPFF 244 (244)
T ss_pred HHhCCCCCCCCCcHHHHHHHHhccCCCCccccccCCHHHHHHHHHHccCCchhccCHHHHhhCCCC
Confidence 999 66553344444444444433332222 22345699999999999999999999999997
No 379
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.93 E-value=1.1e-26 Score=224.59 Aligned_cols=207 Identities=15% Similarity=0.222 Sum_probs=156.0
Q ss_pred eehhhhcccCC-CCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 65 HSDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 65 ~~e~~~Ls~l~-HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
.||+.||..|. ||||++++++ ..+.... ...+++|| ...+...+. ..++..+++.++.||+.||+|||++||
T Consensus 80 kREikIL~nL~gg~NIi~L~Di-V~Dp~Sk-tpaLiFE~v~n~Dfk~ly----~tl~d~dIryY~~elLkALdyCHS~GI 153 (338)
T KOG0668|consen 80 KREIKILQNLRGGPNIIKLLDI-VKDPESK-TPSLIFEYVNNTDFKQLY----PTLTDYDIRYYIYELLKALDYCHSMGI 153 (338)
T ss_pred HHHHHHHHhccCCCCeeehhhh-hcCcccc-CchhHhhhhccccHHHHh----hhhchhhHHHHHHHHHHHHhHHHhcCc
Confidence 38999999988 9999999994 4344333 45789999 888887755 348899999999999999999999999
Q ss_pred eeccCCCCcEEEcc-CCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 143 VVHNVRPSCFVMSS-FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 143 vHrDLKP~NILl~~-~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
+|||+||.|++|+. .-.++|||+|+|..+... .++
T Consensus 154 mHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~---------------------------------~eY----------- 189 (338)
T KOG0668|consen 154 MHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPG---------------------------------KEY----------- 189 (338)
T ss_pred ccccCCcceeeechhhceeeeeecchHhhcCCC---------------------------------cee-----------
Confidence 99999999999994 456899998887332110 000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC-CCccccchhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVL 300 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGvl 300 (720)
...+.+..|.-||++..-+ |+.+-|+|||||+
T Consensus 190 -----------------------------------------------nVRVASRyfKGPELLVdy~~YDYSLD~WS~Gcm 222 (338)
T KOG0668|consen 190 -----------------------------------------------NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCM 222 (338)
T ss_pred -----------------------------------------------eeeeehhhcCCchheeechhccccHHHHHHHHH
Confidence 1145678899999997766 8999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHh-------------hc--CCCCccccc---------------------cCchHHHHH
Q 004998 301 LFELFC---PFSTGEEKTRTMSSL-------------RH--RVLPPQLLL---------------------KFPKEASFC 341 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l-------------~~--~~~p~~~~~---------------------~~p~~~~li 341 (720)
|..|+. ||..........-.+ .+ -.++|.+.. ..|+..||+
T Consensus 223 lA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDll 302 (338)
T KOG0668|consen 223 LASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLL 302 (338)
T ss_pred HHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHH
Confidence 999998 876543222111111 11 123332221 125566999
Q ss_pred HHcCCCCCCCCCChHHHHcCcccCCCc
Q 004998 342 LWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 342 ~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
.++|.+|-.+|+||.|++.||||....
T Consensus 303 dklLrYDHqeRlTakEam~HpyF~~~~ 329 (338)
T KOG0668|consen 303 DKLLRYDHQERLTAKEAMAHPYFAPVR 329 (338)
T ss_pred HHHHhhccccccchHHHhcCchHHHHH
Confidence 999999999999999999999998763
No 380
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.93 E-value=1e-25 Score=253.06 Aligned_cols=211 Identities=18% Similarity=0.243 Sum_probs=163.5
Q ss_pred eehhhhccc-CCCCCceeccccee-ecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004998 65 HSDGVELTH-GDHLRNQGGLSGVC-ENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 65 ~~e~~~Ls~-l~HpnIV~l~~~~~-~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
|.|..+|.. -+|||++.+|++++ .+....+++|+|||| .|||.-|++++ .+..+.|..+..|++.++.||.+||..
T Consensus 63 E~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~n 142 (953)
T KOG0587|consen 63 ELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNN 142 (953)
T ss_pred HHHHHHHHhccCCCCcceEEEEEEEecCCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhc
Confidence 344445544 67999999999666 344566789999999 99999998833 366699999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004998 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
.++|||||-.|||++.++.|||+|||++.+..+..
T Consensus 143 kviHRDikG~NiLLT~e~~VKLvDFGvSaQldsT~--------------------------------------------- 177 (953)
T KOG0587|consen 143 KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDSTV--------------------------------------------- 177 (953)
T ss_pred ceeeecccCceEEEeccCcEEEeeeeeeeeeeccc---------------------------------------------
Confidence 99999999999999999999999999884421110
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC-----CCccccch
Q 004998 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-----VSCASDIY 295 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-----~s~~sDIw 295 (720)
| +....+|||.|||||++...+ |+..+|+|
T Consensus 178 ------------------------------g---------------rRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~W 212 (953)
T KOG0587|consen 178 ------------------------------G---------------RRNTFIGTPYWMAPEVIACDESPDATYDYRSDLW 212 (953)
T ss_pred ------------------------------c---------------cccCcCCCcccccceeeecccCCCCCcccccchh
Confidence 0 112258999999999996543 78899999
Q ss_pred hhhhhhhhccc---cCCCCchHHHHHHHhhcCCCCccc--cccCchHH-HHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 296 RLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQL--LLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 296 SLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~--~~~~p~~~-~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|||++..||.- |+....+.-.++...+ .+||.+ +..|.+.. +||..||++|-.+||++.++|+|||++..
T Consensus 213 sLGITaIEladG~PPl~DmHPmraLF~IpR--NPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~hpFi~e~ 288 (953)
T KOG0587|consen 213 SLGITAIEMAEGAPPLCDMHPMRALFLIPR--NPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKHPFITEQ 288 (953)
T ss_pred hccceeehhcCCCCCccCcchhhhhccCCC--CCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhccCCccccc
Confidence 99999999998 3333333322222222 334433 34565554 99999999999999999999999999954
No 381
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=99.93 E-value=3.2e-26 Score=252.80 Aligned_cols=205 Identities=19% Similarity=0.233 Sum_probs=144.0
Q ss_pred ecCCCcccccccccCCcccccccccC-CCCCC---ccccccccccCCCCccceeeeehhhhcccCCCCCceecccceeec
Q 004998 14 IMEGSSDSAWQDSDSSRALNISGVSD-RNPRL---LRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCEN 89 (720)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~r~~~e~~~Ls~l~HpnIV~l~~~~~~~ 89 (720)
.|.+...-.|...+..+..+.+.|-. +|... .+++.+ .....-.-+-|--+|..+|.+++|||||++++ +-++
T Consensus 6 ~l~~~~~y~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~--~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~-iee~ 82 (732)
T KOG4250|consen 6 VLTSGENYLWEMDERLGKGAFGNVYRGRNKETGRLVAVKTF--NKESSLRPRERWCREIEILKKLNHPNIVKLFD-IEET 82 (732)
T ss_pred ccccCCCcceeehhhhcCCccceeeeecccccccchhHHhh--hhhcccchHHHHHHHHHHHHHcCchhhhhhcc-cCCc
Confidence 45555566788866544333333322 33322 222221 11211222224448999999999999999999 4433
Q ss_pred CC---CCCcEEEEEec-CCCCHHHHHhCC--CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEcc--CCc--
Q 004998 90 EA---AIDPFVHAIEW-GDVSLRQWLDKP--KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSS--FNH-- 159 (720)
Q Consensus 90 ~~---~~~~~~lv~E~-~ggsL~~~L~~~--~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~--~~~-- 159 (720)
.. -...-.++||| .||||+..|+++ ...|++.+++.++..++.||.|||++|||||||||.||++-. +|+
T Consensus 83 ~~~~~~~~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~I 162 (732)
T KOG4250|consen 83 KFLGLVTRLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSI 162 (732)
T ss_pred cccCcccccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceE
Confidence 32 03346899999 999999999543 345999999999999999999999999999999999999863 233
Q ss_pred eEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccCCCccccccccc
Q 004998 160 VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLV 239 (720)
Q Consensus 160 vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~ 239 (720)
.||+|||.|+....++
T Consensus 163 yKLtDfG~Arel~d~s---------------------------------------------------------------- 178 (732)
T KOG4250|consen 163 YKLTDFGAARELDDNS---------------------------------------------------------------- 178 (732)
T ss_pred EeeecccccccCCCCC----------------------------------------------------------------
Confidence 5676666664432210
Q ss_pred cccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-CCCCccccchhhhhhhhhccc---cCCCCc
Q 004998 240 EGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLFELFC---PFSTGE 312 (720)
Q Consensus 240 ~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sDIwSLGvll~eLlt---pf~~~~ 312 (720)
.-+..+||+.|.+||++.. ..|+.-+|.|||||++|++.| ||.+..
T Consensus 179 ---------------------------~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~ 228 (732)
T KOG4250|consen 179 ---------------------------LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFG 228 (732)
T ss_pred ---------------------------eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCC
Confidence 0023689999999999984 779999999999999999999 666553
No 382
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=99.93 E-value=3e-26 Score=247.49 Aligned_cols=202 Identities=19% Similarity=0.206 Sum_probs=162.5
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
.-.|+.++.+++|||||+++| ++... ++|||||+ .-|.|+.||..+...++......+.+||+.||.|||+..+
T Consensus 438 flqEa~iMrnfdHphIikLIG-v~~e~----P~WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkrf 512 (974)
T KOG4257|consen 438 FLQEASIMRNFDHPHIIKLIG-VCVEQ----PMWIVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKRF 512 (974)
T ss_pred HHHHHHHHHhCCCcchhheee-eeecc----ceeEEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhch
Confidence 338889999999999999999 56554 47999999 8899999997777779999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
|||||-..|||+.+...|||.|||+++-...+..-
T Consensus 513 VHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~yY--------------------------------------------- 547 (974)
T KOG4257|consen 513 VHRDIAARNILVSSPQCVKLADFGLSRYLEDDAYY--------------------------------------------- 547 (974)
T ss_pred hhhhhhhhheeecCcceeeecccchhhhccccchh---------------------------------------------
Confidence 99999999999999999999888777433211000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
.. ..... ..-|||||-++-..++.+||||-|||.+|
T Consensus 548 ka-----------------------------------S~~kL---------PIKWmaPESINfRrFTtASDVWMFgVCmW 583 (974)
T KOG4257|consen 548 KA-----------------------------------SRGKL---------PIKWMAPESINFRRFTTASDVWMFGVCMW 583 (974)
T ss_pred hc-----------------------------------ccccc---------ceeecCccccchhcccchhhHHHHHHHHH
Confidence 00 01111 34599999999999999999999999999
Q ss_pred hccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 303 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 303 eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|++. ||.+-... ..+..+.++..+|..+..-|....|+.+||.+||.+||++.+|..
T Consensus 584 EIl~lGvkPfqgvkNs-DVI~~iEnGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~ 644 (974)
T KOG4257|consen 584 EILSLGVKPFQGVKNS-DVIGHIENGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKA 644 (974)
T ss_pred HHHHhcCCcccccccc-ceEEEecCCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHH
Confidence 9998 88876554 344455566666655545455569999999999999999988863
No 383
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.93 E-value=7.2e-26 Score=243.88 Aligned_cols=201 Identities=20% Similarity=0.221 Sum_probs=162.5
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~-~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.|+.++..++|||+|+|++ +|..+. +|||+.|| +.|+|.+||+... ..++....+.++.||..|+.||..+++|
T Consensus 312 kEAAvMKeikHpNLVqLLG-VCT~Ep---PFYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFI 387 (1157)
T KOG4278|consen 312 KEAAVMKEIKHPNLVQLLG-VCTHEP---PFYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFI 387 (1157)
T ss_pred HHHHHHHhhcCccHHHHhh-hhccCC---CeEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhh
Confidence 6778999999999999999 554443 79999999 9999999996543 3478888889999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||-..|.|+.++..||++|||+++....+.+.
T Consensus 388 HRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYT---------------------------------------------- 421 (1157)
T KOG4278|consen 388 HRDLAARNCLVGENHIVKVADFGLSRLMTGDTYT---------------------------------------------- 421 (1157)
T ss_pred hhhhhhhhccccccceEEeeccchhhhhcCCcee----------------------------------------------
Confidence 9999999999999999999888877443222110
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
+ ..+..||+ -|.|||-+....++.++|||+|||+|||
T Consensus 422 ------------------------A----------HAGAKFPI---------KWTAPEsLAyNtFSiKSDVWAFGVLLWE 458 (1157)
T KOG4278|consen 422 ------------------------A----------HAGAKFPI---------KWTAPESLAYNTFSIKSDVWAFGVLLWE 458 (1157)
T ss_pred ------------------------c----------ccCccCcc---------cccCcccccccccccchhhHHHHHHHHH
Confidence 0 11233443 4899999999999999999999999999
Q ss_pred ccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 304 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 304 Llt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
+.| ||++.+- ...+..+.++.........-|+..+|++.||++.|++||+++||-+
T Consensus 459 IATYGMsPYPGidl-SqVY~LLEkgyRM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHq 518 (1157)
T KOG4278|consen 459 IATYGMSPYPGIDL-SQVYGLLEKGYRMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQ 518 (1157)
T ss_pred HHhcCCCCCCCccH-HHHHHHHhccccccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHH
Confidence 998 7877544 3666666666655555556677779999999999999999999854
No 384
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.92 E-value=2.2e-25 Score=232.49 Aligned_cols=214 Identities=16% Similarity=0.219 Sum_probs=159.9
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH--cCc
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS--QGI 142 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs--~gI 142 (720)
||..|-..|+||.||++|+.+-.+.. .||.|+|| .|.+|.-||+++. .+++.+++.|+.||+.||.||.. -.|
T Consensus 516 REyrIHKeLDHpRIVKlYDyfslDtd---sFCTVLEYceGNDLDFYLKQhk-lmSEKEARSIiMQiVnAL~YLNEikpPI 591 (775)
T KOG1151|consen 516 REYRIHKELDHPRIVKLYDYFSLDTD---SFCTVLEYCEGNDLDFYLKQHK-LMSEKEARSIIMQIVNALKYLNEIKPPI 591 (775)
T ss_pred HHHhhhhccCcceeeeeeeeeeeccc---cceeeeeecCCCchhHHHHhhh-hhhHHHHHHHHHHHHHHHHHHhccCCCe
Confidence 77778889999999999994434433 58999999 9999999996554 48999999999999999999997 479
Q ss_pred eeccCCCCcEEEc---cCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004998 143 VVHNVRPSCFVMS---SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 143 vHrDLKP~NILl~---~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
||-||||.||||- ..|.+||.|||+++....++.. .+.|+.-+
T Consensus 592 IHYDLKPgNILLv~GtacGeIKITDFGLSKIMdddSy~------------------------------~vdGmeLT---- 637 (775)
T KOG1151|consen 592 IHYDLKPGNILLVNGTACGEIKITDFGLSKIMDDDSYN------------------------------SVDGMELT---- 637 (775)
T ss_pred eeeccCCccEEEecCcccceeEeeecchhhhccCCccC------------------------------cccceeee----
Confidence 9999999999995 4577999888888665433221 11111000
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC----CCCccccch
Q 004998 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA----PVSCASDIY 295 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~----~~s~~sDIw 295 (720)
....||.||++||.+.-. ..+.++|||
T Consensus 638 -------------------------------------------------SQgAGTYWYLPPEcFvVgkePPKIsnKVDVW 668 (775)
T KOG1151|consen 638 -------------------------------------------------SQGAGTYWYLPPECFVVGKEPPKISNKVDVW 668 (775)
T ss_pred -------------------------------------------------cccCceeeecCcceeecCCCCCccccceeeE
Confidence 014789999999998544 279999999
Q ss_pred hhhhhhhhccc---cCCCCchHHHHHH-----HhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 296 RLGVLLFELFC---PFSTGEEKTRTMS-----SLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 296 SLGvll~eLlt---pf~~~~~~~~~~~-----~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|+|||+|..+. ||........++. ....-.+|+. +--.+...+||++||.+--++|..+.++..||||..-
T Consensus 669 SvGVIFyQClYGrKPFGhnqsQQdILqeNTIlkAtEVqFP~K-PvVsseAkaFIRRCLaYRKeDR~DV~qLA~dpyllPh 747 (775)
T KOG1151|consen 669 SVGVIFYQCLYGRKPFGHNQSQQDILQENTILKATEVQFPPK-PVVSSEAKAFIRRCLAYRKEDRIDVQQLACDPYLLPH 747 (775)
T ss_pred eeehhhhhhhccCCCCCCchhHHHHHhhhchhcceeccCCCC-CccCHHHHHHHHHHHHhhhhhhhhHHHHccCccccch
Confidence 99999999998 6765432222211 1111223333 2234555699999999999999999999999998763
No 385
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.92 E-value=6.6e-25 Score=232.47 Aligned_cols=92 Identities=14% Similarity=0.053 Sum_probs=79.3
Q ss_pred ehhhhcccC--------CCCCceecccceeecCCCCCcEEEEEecCCCCHHHHH-hCCCCCCCHHHHHHHHHHHHHHHHH
Q 004998 66 SDGVELTHG--------DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWL-DKPKRSVDVYECLHIFRQIVEIVYA 136 (720)
Q Consensus 66 ~e~~~Ls~l--------~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L-~~~~~~l~~~~~~~i~~QIl~aL~y 136 (720)
-|+.+|.++ .-.+||+|++.|-..+.++.++|+|+|+.|.+|..|| ....+.++...++.|++||+.||+|
T Consensus 123 DEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGpNG~HVCMVfEvLGdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdY 202 (590)
T KOG1290|consen 123 DEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGPNGQHVCMVFEVLGDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDY 202 (590)
T ss_pred HHHHHHHHHHhcCCCCCCCceeeeeeccceecCCCCcEEEEEehhhhhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHH
Confidence 455566553 2357999999888999999999999999999999999 4455669999999999999999999
Q ss_pred HHH-cCceeccCCCCcEEEccC
Q 004998 137 AHS-QGIVVHNVRPSCFVMSSF 157 (720)
Q Consensus 137 LHs-~gIvHrDLKP~NILl~~~ 157 (720)
||. .||||-||||+|||+...
T Consensus 203 LH~ecgIIHTDlKPENvLl~~~ 224 (590)
T KOG1290|consen 203 LHRECGIIHTDLKPENVLLCST 224 (590)
T ss_pred HHHhcCccccCCCcceeeeecc
Confidence 997 599999999999999754
No 386
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=99.92 E-value=1.1e-25 Score=249.12 Aligned_cols=203 Identities=16% Similarity=0.233 Sum_probs=163.9
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
+-.|+.||.+++||||++|-|++-... +++|+.|| ++|+|..||+++.+.++..+..-+++.|+.|+.||-+.|+
T Consensus 677 FL~EAsIMGQFdHPNIIrLEGVVTks~----PvMIiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~Y 752 (996)
T KOG0196|consen 677 FLSEASIMGQFDHPNIIRLEGVVTKSK----PVMIITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNY 752 (996)
T ss_pred hhhhhhhcccCCCCcEEEEEEEEecCc----eeEEEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCc
Confidence 338899999999999999999544433 68999999 9999999998887889999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
|||||-..|||++.+-..|+.|||+++....+.
T Consensus 753 VHRDLAARNILVNsnLvCKVsDFGLSRvledd~----------------------------------------------- 785 (996)
T KOG0196|consen 753 VHRDLAARNILVNSNLVCKVSDFGLSRVLEDDP----------------------------------------------- 785 (996)
T ss_pred hhhhhhhhheeeccceEEEeccccceeecccCC-----------------------------------------------
Confidence 999999999999999999998888875432110
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
+..+...| ... ...|.|||.+...+++.+|||||+||+||
T Consensus 786 ---------------------~~~ytt~G----------GKI---------PiRWTAPEAIa~RKFTsASDVWSyGIVmW 825 (996)
T KOG0196|consen 786 ---------------------EAAYTTLG----------GKI---------PIRWTAPEAIAYRKFTSASDVWSYGIVMW 825 (996)
T ss_pred ---------------------CccccccC----------Ccc---------ceeecChhHhhhcccCchhhccccceEEE
Confidence 00011111 111 35799999999999999999999999999
Q ss_pred hccc----cCCCCchHHHHHHHhhcC-CCCccccccCchHH-HHHHHcCCCCCCCCCChHHHHc
Q 004998 303 ELFC----PFSTGEEKTRTMSSLRHR-VLPPQLLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 303 eLlt----pf~~~~~~~~~~~~l~~~-~~p~~~~~~~p~~~-~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|.++ ||...... ..++.+..+ .+||. -.+|... .|+++||++|-.+||++.+|+.
T Consensus 826 EVmSyGERPYWdmSNQ-dVIkaIe~gyRLPpP--mDCP~aL~qLMldCWqkdR~~RP~F~qiV~ 886 (996)
T KOG0196|consen 826 EVMSYGERPYWDMSNQ-DVIKAIEQGYRLPPP--MDCPAALYQLMLDCWQKDRNRRPKFAQIVS 886 (996)
T ss_pred EecccCCCcccccchH-HHHHHHHhccCCCCC--CCCcHHHHHHHHHHHHHHhhcCCCHHHHHH
Confidence 9998 88887666 445555544 34443 2455555 9999999999999999999986
No 387
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.92 E-value=2.4e-26 Score=227.15 Aligned_cols=214 Identities=20% Similarity=0.249 Sum_probs=158.5
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCC---cEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAID---PFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~---~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
|..+|..+|..++|.|++..++ +.+.. +.. .+|++.|+...+|...|-.+. .++...++-+++||+.||.|||+
T Consensus 98 rvFre~kmLcfFkHdNVLSaLD-ILQPp-h~dfFqEiYV~TELmQSDLHKIIVSPQ-~Ls~DHvKVFlYQILRGLKYLHs 174 (449)
T KOG0664|consen 98 RVFREIKMLSSFRHDNVLSLLD-ILQPA-NPSFFQELYVLTELMQSDLHKIIVSPQ-ALTPDHVKVFVYQILRGLKYLHT 174 (449)
T ss_pred HHHHHHHHHHhhccccHHHHHH-hcCCC-CchHHHHHHHHHHHHHhhhhheeccCC-CCCcchhhhhHHHHHhhhHHHhh
Confidence 6668888999999999999999 33322 221 258889998889999885554 49999999999999999999999
Q ss_pred cCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004998 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
.||.||||||.|+|++++..+||||||+++....+..
T Consensus 175 A~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~~------------------------------------------- 211 (449)
T KOG0664|consen 175 ANILHRDIKPGNLLVNSNCILKICDFGLARTWDQRDR------------------------------------------- 211 (449)
T ss_pred cchhhccCCCccEEeccCceEEecccccccccchhhh-------------------------------------------
Confidence 9999999999999999999999988888754322100
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC-CCccccchhhh
Q 004998 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLG 298 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLG 298 (720)
..| +..+-|.+|+|||++.|.. |+.++||||+|
T Consensus 212 --------------------------------------------~hM--TqEVVTQYYRAPEiLMGaRhYs~AvDiWSVG 245 (449)
T KOG0664|consen 212 --------------------------------------------LNM--THEVVTQYYRAPELLMGARRYTGAVDIWSVG 245 (449)
T ss_pred --------------------------------------------hhh--HHHHHHHHhccHHHhhcchhhcCccceehhh
Confidence 000 1135688999999999987 99999999999
Q ss_pred hhhhhccc---cCCCCch--------------HHHHHHH---------hhcCCCCccccccC---------chHHHHHHH
Q 004998 299 VLLFELFC---PFSTGEE--------------KTRTMSS---------LRHRVLPPQLLLKF---------PKEASFCLW 343 (720)
Q Consensus 299 vll~eLlt---pf~~~~~--------------~~~~~~~---------l~~~~~p~~~~~~~---------p~~~~li~~ 343 (720)
||+.||+. -|....+ ..+.|.. ++....+|.+.-.+ -...+++..
T Consensus 246 CIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~ 325 (449)
T KOG0664|consen 246 CIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQK 325 (449)
T ss_pred HHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHH
Confidence 99999997 2322111 1111211 22223333322111 122378899
Q ss_pred cCCCCCCCCCChHHHHcCcccCCCc
Q 004998 344 LLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 344 ~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
+|++||.+|.+.++++.|+++.+.+
T Consensus 326 ~l~~d~dkris~~~A~~~~~~~e~R 350 (449)
T KOG0664|consen 326 LLHFDPDKRISVEEALQHRYLEEGR 350 (449)
T ss_pred HhCCCCcccccHhhhcccccccccc
Confidence 9999999999999999999987753
No 388
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=99.92 E-value=7.3e-26 Score=243.47 Aligned_cols=205 Identities=16% Similarity=0.154 Sum_probs=154.2
Q ss_pred eeeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCC-CCHHHHHHHHHHHHHHHHHHHH
Q 004998 62 LRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRS-VDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 62 ~r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~-l~~~~~~~i~~QIl~aL~yLHs 139 (720)
+-..+|+.+|++++|||||++++++..++ ++++++|| ..|+|.+||.++..+ +.-.....|+.||+.|++||.+
T Consensus 580 ~~F~kEIkiLsqLkhPNIveLvGVC~~De----PicmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes 655 (807)
T KOG1094|consen 580 NDFLKEIKILSRLKHPNIVELLGVCVQDD----PLCMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLES 655 (807)
T ss_pred HHHHHHHHHHhccCCCCeeEEEeeeecCC----chHHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHh
Confidence 34448899999999999999999555555 57999999 889999999555333 3556677799999999999999
Q ss_pred cCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004998 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
.++|||||.+.|+|++.++++||+|||.++..-. +|+
T Consensus 656 ~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lys----------------------------------g~y--------- 692 (807)
T KOG1094|consen 656 LNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYS----------------------------------GDY--------- 692 (807)
T ss_pred hchhhccccccceeecCcccEEecCccccccccc----------------------------------CCc---------
Confidence 9999999999999999999999999988853211 111
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhh
Q 004998 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
.+. +...+-...|||||.+.-++++++||+|+|||
T Consensus 693 -------------------------y~v--------------------qgr~vlpiRwmawEsillgkFttaSDvWafgv 727 (807)
T KOG1094|consen 693 -------------------------YRV--------------------QGRAVLPIRWMAWESILLGKFTTASDVWAFGV 727 (807)
T ss_pred -------------------------eee--------------------ecceeeeeeehhHHHHHhccccchhhhhhhHH
Confidence 000 00123356899999999899999999999999
Q ss_pred hhhhccc-----cCCCCchHHHHHHHhh----cCCC--CccccccCchHH-HHHHHcCCCCCCCCCChHHHH
Q 004998 300 LLFELFC-----PFSTGEEKTRTMSSLR----HRVL--PPQLLLKFPKEA-SFCLWLLHPEPSGRPKMGELL 359 (720)
Q Consensus 300 ll~eLlt-----pf~~~~~~~~~~~~l~----~~~~--p~~~~~~~p~~~-~li~~~L~~dP~~Rpta~eiL 359 (720)
++||+++ ||...... ....+.. ++.. -+..+..+|... +++++||..|-.+||+.+++.
T Consensus 728 TlwE~~~~C~e~Py~~lt~e-~vven~~~~~~~~~~~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh 798 (807)
T KOG1094|consen 728 TLWEVFMLCREQPYSQLTDE-QVVENAGEFFRDQGRQVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLH 798 (807)
T ss_pred HHHHHHHHHhhCchhhhhHH-HHHHhhhhhcCCCCcceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHH
Confidence 9999998 88765433 2222221 1111 111223445444 999999999999999999984
No 389
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.92 E-value=3.8e-25 Score=216.20 Aligned_cols=159 Identities=18% Similarity=0.211 Sum_probs=122.3
Q ss_pred CCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCccccccccc
Q 004998 105 VSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQN 184 (720)
Q Consensus 105 gsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~ 184 (720)
|+|.+++...+..+++.+++.|+.||+.||.|||+++ ||+|||++.++.+++ ||.+...+..
T Consensus 1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~~~~~~--fG~~~~~~~~---------- 62 (176)
T smart00750 1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTWDGLLKL--DGSVAFKTPE---------- 62 (176)
T ss_pred CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCccceee--ccceEeeccc----------
Confidence 6899999765667999999999999999999999998 999999999999998 8876321100
Q ss_pred ccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCC
Q 004998 185 METKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPF 264 (720)
Q Consensus 185 ~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~ 264 (720)
T Consensus 63 -------------------------------------------------------------------------------- 62 (176)
T smart00750 63 -------------------------------------------------------------------------------- 62 (176)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CccccccccCCcccCCccccCCCCCccccchhhhhhhhhccc---cCCCCchHHHHHHHhhcCCCCc-----cccccCc-
Q 004998 265 PMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPP-----QLLLKFP- 335 (720)
Q Consensus 265 ~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~-----~~~~~~p- 335 (720)
...||+.|+|||++.+..++.++|||||||++|||++ ||............+.....+. ......+
T Consensus 63 -----~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (176)
T smart00750 63 -----QSRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSA 137 (176)
T ss_pred -----cCCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHh
Confidence 0246899999999999999999999999999999999 6654333222333332221111 1111222
Q ss_pred --hHHHHHHHcCCCCCCCCCChHHHHcCcccCC
Q 004998 336 --KEASFCLWLLHPEPSGRPKMGELLQSEFLNE 366 (720)
Q Consensus 336 --~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~ 366 (720)
...+|+.+||..+|.+||++.|+++|+|+..
T Consensus 138 ~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~ 170 (176)
T smart00750 138 ARSFADFMRVCASRLPQRREAANHYLAHCRALF 170 (176)
T ss_pred hhhHHHHHHHHHhcccccccCHHHHHHHHHHHH
Confidence 3569999999999999999999999998753
No 390
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.91 E-value=4.9e-25 Score=234.20 Aligned_cols=204 Identities=17% Similarity=0.262 Sum_probs=153.7
Q ss_pred ehhhhcccCCC------CCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCC--CCCHHHHHHHHHHHHHHHHHH
Q 004998 66 SDGVELTHGDH------LRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKR--SVDVYECLHIFRQIVEIVYAA 137 (720)
Q Consensus 66 ~e~~~Ls~l~H------pnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~--~l~~~~~~~i~~QIl~aL~yL 137 (720)
+|..||.+|+- -|+|+||..|+. ..++|||+|-...+|++.|++.+. .|....++.|+.|++.||..|
T Consensus 477 ~EleiLkKL~~AD~Edk~Hclrl~r~F~h----knHLClVFE~LslNLRevLKKyG~nvGL~ikaVRsYaqQLflALklL 552 (752)
T KOG0670|consen 477 KELEILKKLNDADPEDKFHCLRLFRHFKH----KNHLCLVFEPLSLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLL 552 (752)
T ss_pred HHHHHHHHhhccCchhhhHHHHHHHHhhh----cceeEEEehhhhchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHH
Confidence 56678887763 478898884433 337899999988899999976554 378889999999999999999
Q ss_pred HHcCceeccCCCCcEEEcc-CCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCC
Q 004998 138 HSQGIVVHNVRPSCFVMSS-FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 216 (720)
Q Consensus 138 Hs~gIvHrDLKP~NILl~~-~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~ 216 (720)
-..||+|.||||+|||++. .+.+||||||.|...+...+.
T Consensus 553 K~c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~~eneit--------------------------------------- 593 (752)
T KOG0670|consen 553 KKCGVLHADIKPDNILVNESKNILKLCDFGSASFASENEIT--------------------------------------- 593 (752)
T ss_pred HhcCeeecccCccceEeccCcceeeeccCcccccccccccc---------------------------------------
Confidence 9999999999999999995 456899999988554333211
Q ss_pred CCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchh
Q 004998 217 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYR 296 (720)
Q Consensus 217 ~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwS 296 (720)
+++-+..|.|||++.|.+|++..|+||
T Consensus 594 -----------------------------------------------------PYLVSRFYRaPEIiLG~~yd~~iD~WS 620 (752)
T KOG0670|consen 594 -----------------------------------------------------PYLVSRFYRAPEIILGLPYDYPIDTWS 620 (752)
T ss_pred -----------------------------------------------------HHHHHHhccCcceeecCcccCCcccee
Confidence 245577899999999999999999999
Q ss_pred hhhhhhhcccc---CCCCchH--HHHHHHhhcCCCCcc------------------------------------------
Q 004998 297 LGVLLFELFCP---FSTGEEK--TRTMSSLRHRVLPPQ------------------------------------------ 329 (720)
Q Consensus 297 LGvll~eLltp---f~~~~~~--~~~~~~l~~~~~p~~------------------------------------------ 329 (720)
+||+||||.|+ |++.... ...+..+. +.+|..
T Consensus 621 vgctLYElYtGkIlFpG~TNN~MLrl~me~K-Gk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtk 699 (752)
T KOG0670|consen 621 VGCTLYELYTGKILFPGRTNNQMLRLFMELK-GKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTK 699 (752)
T ss_pred eceeeEEeeccceecCCCCcHHHHHHHHHhc-CCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcch
Confidence 99999999993 5544322 11111111 111100
Q ss_pred -cc----c--cCch--------HHHHHHHcCCCCCCCCCChHHHHcCcccCC
Q 004998 330 -LL----L--KFPK--------EASFCLWLLHPEPSGRPKMGELLQSEFLNE 366 (720)
Q Consensus 330 -~~----~--~~p~--------~~~li~~~L~~dP~~Rpta~eiL~hp~~~~ 366 (720)
+. . .+|. ..+|+..||..||++|.|+.++|+||||++
T Consensus 700 dl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~nqAL~HpFi~~ 751 (752)
T KOG0670|consen 700 DLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVNQALKHPFITE 751 (752)
T ss_pred hHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCHHHHhcCCcccC
Confidence 00 0 0111 238999999999999999999999999985
No 391
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.91 E-value=8.7e-25 Score=229.66 Aligned_cols=212 Identities=15% Similarity=0.186 Sum_probs=154.0
Q ss_pred ccceeeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHH
Q 004998 59 DFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAA 137 (720)
Q Consensus 59 ~~~~r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yL 137 (720)
.+.||+ +|+.----|+|+||+.+++.=..+.....++|||.+| +.|||.|||... .++......++..++.||+||
T Consensus 248 ~SWfrE-tEIYqTvmLRHENILgFIaaD~~~~gs~TQLwLvTdYHe~GSL~DyL~r~--tv~~~~ml~LalS~AsGLaHL 324 (513)
T KOG2052|consen 248 RSWFRE-TEIYQTVMLRHENILGFIAADNKDNGSWTQLWLVTDYHEHGSLYDYLNRN--TVTTEGMLKLALSIASGLAHL 324 (513)
T ss_pred hhhhhH-HHHHHHHHhccchhhhhhhccccCCCceEEEEEeeecccCCcHHHHHhhc--cCCHHHHHHHHHHHhhhHHHH
Confidence 344443 3433333488999999999656666677789999999 999999999663 399999999999999999999
Q ss_pred HH--------cCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccc
Q 004998 138 HS--------QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRRED 209 (720)
Q Consensus 138 Hs--------~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~D 209 (720)
|- -.|+|||||..|||+..+|...|+|+|+|.....+.
T Consensus 325 H~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~h~~~t---------------------------------- 370 (513)
T KOG2052|consen 325 HMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSDT---------------------------------- 370 (513)
T ss_pred HHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeEEecccC----------------------------------
Confidence 94 359999999999999999999999888884322210
Q ss_pred cccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC--
Q 004998 210 LQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-- 287 (720)
Q Consensus 210 fgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-- 287 (720)
...++.....+||..|||||++...-
T Consensus 371 ----------------------------------------------------~~idi~~N~rVGTKRYMAPEvLdetin~ 398 (513)
T KOG2052|consen 371 ----------------------------------------------------DTIDIPPNPRVGTKRYMAPEVLDETINM 398 (513)
T ss_pred ----------------------------------------------------CcccCCCCCccceeeccChHHhhhhcCh
Confidence 00111223369999999999996543
Q ss_pred ----CCccccchhhhhhhhhccc-------------cCCCC---chHHHHHH-HhhcCCCCccccccC---ch---HHHH
Q 004998 288 ----VSCASDIYRLGVLLFELFC-------------PFSTG---EEKTRTMS-SLRHRVLPPQLLLKF---PK---EASF 340 (720)
Q Consensus 288 ----~s~~sDIwSLGvll~eLlt-------------pf~~~---~~~~~~~~-~l~~~~~p~~~~~~~---p~---~~~l 340 (720)
.-..+||||||.++||+.. ||... ++..+.|. .+.-..+.|.+++.| |. ...+
T Consensus 399 ~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~kl 478 (513)
T KOG2052|consen 399 KHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKL 478 (513)
T ss_pred hhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCCCHHHHhcceeecccCCCCCcccccCHHHHHHHHH
Confidence 1346899999999999986 66543 23333333 222333444444433 22 2389
Q ss_pred HHHcCCCCCCCCCChHHHH
Q 004998 341 CLWLLHPEPSGRPKMGELL 359 (720)
Q Consensus 341 i~~~L~~dP~~Rpta~eiL 359 (720)
++.||+.||..|.||-.|.
T Consensus 479 MkeCW~~Np~aRltALriK 497 (513)
T KOG2052|consen 479 MKECWYANPAARLTALRIK 497 (513)
T ss_pred HHHhhcCCchhhhHHHHHH
Confidence 9999999999999886553
No 392
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.91 E-value=1.2e-24 Score=237.84 Aligned_cols=206 Identities=17% Similarity=0.149 Sum_probs=163.7
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
+|+.+|.+|+|||+|+|||++.. . ...+|||+ ..|+|.+.|++ ....|.......|+.||+.|+.||.++++|
T Consensus 160 rEas~M~~L~H~hliRLyGvVl~-q----p~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlv 234 (1039)
T KOG0199|consen 160 REASHMLKLQHPHLIRLYGVVLD-Q----PAMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLV 234 (1039)
T ss_pred HHHHHHHhccCcceeEEeeeecc-c----hhhHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 67779999999999999995554 3 46899999 99999999965 555688889999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||-..|+|+-....|||+|||+.+..|..+-... |
T Consensus 235 HRDLAARNlllasprtVKI~DFGLmRaLg~ned~Yv------------------------------m------------- 271 (1039)
T KOG0199|consen 235 HRDLAARNLLLASPRTVKICDFGLMRALGENEDMYV------------------------------M------------- 271 (1039)
T ss_pred hhhhhhhhheecccceeeeecccceeccCCCCcceE------------------------------e-------------
Confidence 999999999999999999999988866544311000 0
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
+ .. ..-...|+|||.+....++.+||+|++||++||
T Consensus 272 ---------------------------~------p~-----------rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWE 307 (1039)
T KOG0199|consen 272 ---------------------------A------PQ-----------RKVPFAWCAPESLRHRKFSHASDVWMYGVTIWE 307 (1039)
T ss_pred ---------------------------c------CC-----------CcCcccccCHhHhccccccccchhhhhhhhHHh
Confidence 0 00 112456999999999999999999999999999
Q ss_pred ccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004998 304 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 304 Llt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
|++ ||.+.... .++..+..+..-+.......+..++++.||..+|.+|||+..|...-+.
T Consensus 308 MFtyGEePW~G~~g~-qIL~~iD~~erLpRPk~csedIY~imk~cWah~paDRptFsair~~~~l 371 (1039)
T KOG0199|consen 308 MFTYGEEPWVGCRGI-QILKNIDAGERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDLVL 371 (1039)
T ss_pred hhccCCCCCCCCCHH-HHHHhccccccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHhHHH
Confidence 999 77776554 5666666665555444444455599999999999999999988754333
No 393
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.91 E-value=7.9e-25 Score=235.43 Aligned_cols=147 Identities=24% Similarity=0.352 Sum_probs=128.0
Q ss_pred ehhhhcccCC---CCCceecccceeecCCCCCcEEEEEec--CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004998 66 SDGVELTHGD---HLRNQGGLSGVCENEAAIDPFVHAIEW--GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 66 ~e~~~Ls~l~---HpnIV~l~~~~~~~~~~~~~~~lv~E~--~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
.|+.||+.++ |+||+++++ +|+++. .+|++||. .|.+|.++|..+. .++|.++..||+||+.|+++||++
T Consensus 615 ~EIqIla~l~~~sH~NIlKlLd-fFEddd---~yyl~te~hg~gIDLFd~IE~kp-~m~E~eAk~IFkQV~agi~hlh~~ 689 (772)
T KOG1152|consen 615 SEIQILATLNKHSHENILKLLD-FFEDDD---YYYLETEVHGEGIDLFDFIEFKP-RMDEPEAKLIFKQVVAGIKHLHDQ 689 (772)
T ss_pred hhHHHHHHhhhcCccchhhhhh-eeecCC---eeEEEecCCCCCcchhhhhhccC-ccchHHHHHHHHHHHhcccccccc
Confidence 7888999998 999999999 887775 68999998 8899999995444 499999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004998 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||||||||-+|+.++.+|-+||||||.+.-. +-+-|
T Consensus 690 ~ivhrdikdenvivd~~g~~klidfgsaa~~----------------------------------ksgpf---------- 725 (772)
T KOG1152|consen 690 GIVHRDIKDENVIVDSNGFVKLIDFGSAAYT----------------------------------KSGPF---------- 725 (772)
T ss_pred CceecccccccEEEecCCeEEEeeccchhhh----------------------------------cCCCc----------
Confidence 9999999999999999999999999987321 00111
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCC-Cccccchhhhh
Q 004998 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYRLGV 299 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~-s~~sDIwSLGv 299 (720)
...+||..|.|||++.|.+| +..-|||+||+
T Consensus 726 ------------------------------------------------d~f~gtv~~aapevl~g~~y~gk~qdiwalgi 757 (772)
T KOG1152|consen 726 ------------------------------------------------DVFVGTVDYAAPEVLGGEKYLGKPQDIWALGI 757 (772)
T ss_pred ------------------------------------------------ceeeeeccccchhhhCCCccCCCcchhhhhhh
Confidence 12589999999999999986 88899999999
Q ss_pred hhhhccc---cCC
Q 004998 300 LLFELFC---PFS 309 (720)
Q Consensus 300 ll~eLlt---pf~ 309 (720)
+||.++. ||.
T Consensus 758 llytivykenpyy 770 (772)
T KOG1152|consen 758 LLYTIVYKENPYY 770 (772)
T ss_pred eeeEEEeccCCCc
Confidence 9999887 664
No 394
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.91 E-value=1.1e-23 Score=236.86 Aligned_cols=212 Identities=17% Similarity=0.176 Sum_probs=140.9
Q ss_pred ehhhhcccCCCCCc-----eecccceeecC----CCCCcEEEEEec-CCCCHHHHHhCCC--------------------
Q 004998 66 SDGVELTHGDHLRN-----QGGLSGVCENE----AAIDPFVHAIEW-GDVSLRQWLDKPK-------------------- 115 (720)
Q Consensus 66 ~e~~~Ls~l~HpnI-----V~l~~~~~~~~----~~~~~~~lv~E~-~ggsL~~~L~~~~-------------------- 115 (720)
.|..++.+++|.++ +++++.+.... ......++|||| .+++|.++|....
T Consensus 221 vE~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~ 300 (507)
T PLN03224 221 VEAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDN 300 (507)
T ss_pred HHHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhh
Confidence 35556666766655 56666222111 112347999999 9999999985321
Q ss_pred ---CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCC
Q 004998 116 ---RSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSS 192 (720)
Q Consensus 116 ---~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~ 192 (720)
..+++..++.++.||+.+|.|||+++|+||||||+|||++.++.+||+|||++.......
T Consensus 301 ~~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~----------------- 363 (507)
T PLN03224 301 MPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGI----------------- 363 (507)
T ss_pred cccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCCCcEEEEeCcCccccccCC-----------------
Confidence 123567788999999999999999999999999999999999999999999874321100
Q ss_pred CCchhhHhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccc
Q 004998 193 PLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLM 272 (720)
Q Consensus 193 ~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~ 272 (720)
.+ ......
T Consensus 364 ----------------~~--------------------------------------------------------~~~~g~ 371 (507)
T PLN03224 364 ----------------NF--------------------------------------------------------NPLYGM 371 (507)
T ss_pred ----------------cc--------------------------------------------------------CccccC
Confidence 00 000024
Q ss_pred cCCcccCCccccCCC--------------------CC--ccccchhhhhhhhhccccCC-CCch---HH----------H
Q 004998 273 ETNWYASPEELAGAP--------------------VS--CASDIYRLGVLLFELFCPFS-TGEE---KT----------R 316 (720)
Q Consensus 273 GT~~Y~APE~l~~~~--------------------~s--~~sDIwSLGvll~eLltpf~-~~~~---~~----------~ 316 (720)
+|+.|+|||++.... |+ ...||||+||++|+|++|.. +... .. .
T Consensus 372 ~tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~ 451 (507)
T PLN03224 372 LDPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLN 451 (507)
T ss_pred CCcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHH
Confidence 588999999985432 11 24799999999999998432 1110 00 0
Q ss_pred HHHHhhcCCCC-ccccccCchHHHHHHHcCCCCC---CCCCChHHHHcCcccCC
Q 004998 317 TMSSLRHRVLP-PQLLLKFPKEASFCLWLLHPEP---SGRPKMGELLQSEFLNE 366 (720)
Q Consensus 317 ~~~~l~~~~~p-~~~~~~~p~~~~li~~~L~~dP---~~Rpta~eiL~hp~~~~ 366 (720)
.+.......+. +.+....+...+|+.+||..+| .+|+|+.|+|+||||..
T Consensus 452 ~~r~~~~~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~f~~ 505 (507)
T PLN03224 452 RWRMYKGQKYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRFFLP 505 (507)
T ss_pred HHHhhcccCCCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCCcCC
Confidence 01111111111 1122233445699999999766 68999999999999975
No 395
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.90 E-value=3.1e-24 Score=263.95 Aligned_cols=192 Identities=17% Similarity=0.213 Sum_probs=140.6
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH---HcC
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAH---SQG 141 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLH---s~g 141 (720)
.|..++.+++|||||++++ ++.+.. ..|+|||| .+++|.++++. +++..+..|+.||+.||+||| +.+
T Consensus 732 ~~~~~l~~l~HpnIv~~~~-~~~~~~---~~~lv~Ey~~~g~L~~~l~~----l~~~~~~~i~~~ia~~L~yLH~~~~~~ 803 (968)
T PLN00113 732 SEIADMGKLQHPNIVKLIG-LCRSEK---GAYLIHEYIEGKNLSEVLRN----LSWERRRKIAIGIAKALRFLHCRCSPA 803 (968)
T ss_pred HHHHHHhhCCCCCcceEEE-EEEcCC---CCEEEEeCCCCCcHHHHHhc----CCHHHHHHHHHHHHHHHHHhccCCCCC
Confidence 4577899999999999999 555443 46999999 89999999942 889999999999999999999 679
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++..++. |+..... .
T Consensus 804 iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~------------------------------------------~------- 833 (968)
T PLN00113 804 VVVGNLSPEKIIIDGKDEPHLR-LSLPGLL------------------------------------------C------- 833 (968)
T ss_pred eecCCCCHHhEEECCCCceEEE-ecccccc------------------------------------------c-------
Confidence 9999999999999988777763 3221000 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......||+.|+|||++.+..++.++|||||||++
T Consensus 834 ---------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl 868 (968)
T PLN00113 834 ---------------------------------------------TDTKCFISSAYVAPETRETKDITEKSDIYGFGLIL 868 (968)
T ss_pred ---------------------------------------------cCCCccccccccCcccccCCCCCcccchhhHHHHH
Confidence 00012578999999999988899999999999999
Q ss_pred hhccc---cCCCCch----HHHHHH-Hhhc----CCCCcccc-------ccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 302 FELFC---PFSTGEE----KTRTMS-SLRH----RVLPPQLL-------LKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt---pf~~~~~----~~~~~~-~l~~----~~~p~~~~-------~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||..... ...... .... ....+.+. .......+++.+||+.||++|||+.|+++
T Consensus 869 ~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~ 946 (968)
T PLN00113 869 IELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLK 946 (968)
T ss_pred HHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHH
Confidence 99999 5532211 100000 0000 01111111 11122348999999999999999999986
No 396
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=99.90 E-value=2.2e-24 Score=228.28 Aligned_cols=224 Identities=13% Similarity=0.127 Sum_probs=156.1
Q ss_pred CCCCCccccccccccCCCCccceeeeehhhhcccCCCCCceecccceeecCC-CCCcEEEEEec-CCCCHHHHHhCCCCC
Q 004998 40 RNPRLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEA-AIDPFVHAIEW-GDVSLRQWLDKPKRS 117 (720)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~-~~~~~~lv~E~-~ggsL~~~L~~~~~~ 117 (720)
-+.+.++++.+... +...|..|+++.-+-.+.|+||+++++ .-+.+. ....++||+|| ..|+|.+||..+.
T Consensus 231 L~~~~VAVKifp~~----~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~-~ekr~t~~~~eywLVt~fh~kGsL~dyL~~nt-- 303 (534)
T KOG3653|consen 231 LDNRLVAVKIFPEQ----EKQSFQNEKNIYSLPGMKHENILQFIG-AEKRGTADRMEYWLVTEFHPKGSLCDYLKANT-- 303 (534)
T ss_pred ccCceeEEEecCHH----HHHHHHhHHHHHhccCccchhHHHhhc-hhccCCccccceeEEeeeccCCcHHHHHHhcc--
Confidence 44455554433321 223455667777777899999999999 222221 23468999999 9999999996654
Q ss_pred CCHHHHHHHHHHHHHHHHHHHH---------cCceeccCCCCcEEEccCCceEEeccCcccCCCCCCccccccccccccc
Q 004998 118 VDVYECLHIFRQIVEIVYAAHS---------QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETK 188 (720)
Q Consensus 118 l~~~~~~~i~~QIl~aL~yLHs---------~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~ 188 (720)
+++.+..+|+..+++||+|||+ ..|+|||||..|||+..+++..|+|||++..+......
T Consensus 304 isw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~~~p~~~~----------- 372 (534)
T KOG3653|consen 304 ISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALRLEPGKPQ----------- 372 (534)
T ss_pred ccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeEEecCCCCC-----------
Confidence 8999999999999999999995 57999999999999999999999999988543211000
Q ss_pred CCCCCCchhhHhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccc
Q 004998 189 DLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQ 268 (720)
Q Consensus 189 ~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~ 268 (720)
+| .
T Consensus 373 -------------------~d----------------------------------------------------------~ 375 (534)
T KOG3653|consen 373 -------------------GD----------------------------------------------------------T 375 (534)
T ss_pred -------------------cc----------------------------------------------------------h
Confidence 00 0
Q ss_pred cccccCCcccCCccccCCC-C-----Cccccchhhhhhhhhccc---------------cCCC---Cch-HHHHHHHhhc
Q 004998 269 ILLMETNWYASPEELAGAP-V-----SCASDIYRLGVLLFELFC---------------PFST---GEE-KTRTMSSLRH 323 (720)
Q Consensus 269 ~~~~GT~~Y~APE~l~~~~-~-----s~~sDIwSLGvll~eLlt---------------pf~~---~~~-~~~~~~~l~~ 323 (720)
...+||..|||||++.+.. + -.+.||||+|.+||||++ ||.. ..+ ...+.....+
T Consensus 376 ~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~e~mq~~VV~ 455 (534)
T KOG3653|consen 376 HGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTLEEMQELVVR 455 (534)
T ss_pred hhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCCHHHHHHHHHh
Confidence 1158999999999997764 2 247999999999999998 1221 011 1222222223
Q ss_pred CCCCccccccCc---h---HHHHHHHcCCCCCCCCCChHHH
Q 004998 324 RVLPPQLLLKFP---K---EASFCLWLLHPEPSGRPKMGEL 358 (720)
Q Consensus 324 ~~~p~~~~~~~p---~---~~~li~~~L~~dP~~Rpta~ei 358 (720)
....|.++..|- . ..+.+..||..||+.|.|+.=+
T Consensus 456 kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv 496 (534)
T KOG3653|consen 456 KKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCV 496 (534)
T ss_pred hccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHH
Confidence 333344433332 2 2388999999999999997544
No 397
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.90 E-value=1.1e-23 Score=229.99 Aligned_cols=207 Identities=18% Similarity=0.225 Sum_probs=160.3
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|+.++...+|||||.||+.+...+ ..++.||| +||+|.+.- ....++++.++.++.+..+.||.|||++|=+|
T Consensus 61 qei~~~~dc~h~nivay~gsylr~d----klwicMEycgggslQdiy-~~TgplselqiayvcRetl~gl~ylhs~gk~h 135 (829)
T KOG0576|consen 61 QEIGMLRDCRHPNIVAYFGSYLRRD----KLWICMEYCGGGSLQDIY-HVTGPLSELQIAYVCRETLQGLKYLHSQGKIH 135 (829)
T ss_pred cceeeeecCCCcChHHHHhhhhhhc----CcEEEEEecCCCccccee-eecccchhHHHHHHHhhhhccchhhhcCCccc
Confidence 5666888899999999999443333 46999999 899999855 55566999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
||||-.|||+++.|.+|+.|||.+-+++..
T Consensus 136 RdiKGanilltd~gDvklaDfgvsaqitat-------------------------------------------------- 165 (829)
T KOG0576|consen 136 RDIKGANILLTDEGDVKLADFGVSAQITAT-------------------------------------------------- 165 (829)
T ss_pred ccccccceeecccCceeecccCchhhhhhh--------------------------------------------------
Confidence 999999999999999999999987433211
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCcccc---CCCCCccccchhhhhhh
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA---GAPVSCASDIYRLGVLL 301 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~---~~~~s~~sDIwSLGvll 301 (720)
-.+.....|||+|||||+.. ...|...+|||++|+..
T Consensus 166 ----------------------------------------i~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitA 205 (829)
T KOG0576|consen 166 ----------------------------------------IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITA 205 (829)
T ss_pred ----------------------------------------hhhhhcccCCccccchhHHHHHhcccccccccccccccch
Confidence 00112258999999999873 34499999999999998
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccc--cCchHH-HHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL--KFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~--~~p~~~-~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
.||-- |.....+....+..-..+.-||.+.. .|.... +|++.+|.++|++||+++.+|+|||+...
T Consensus 206 iel~eLqpplfdlhpmr~l~LmTkS~~qpp~lkDk~kws~~fh~fvK~altknpKkRptaeklL~h~fvs~~ 277 (829)
T KOG0576|consen 206 IELGELQPPLFDLHPMRALFLMTKSGFQPPTLKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQT 277 (829)
T ss_pred hhhhhcCCcccccchHHHHHHhhccCCCCCcccCCccchHHHHHHHHHHhcCCCccCCChhhheeceeeccc
Confidence 88876 43333333222222223444554433 444444 99999999999999999999999999987
No 398
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.89 E-value=1.5e-23 Score=219.92 Aligned_cols=249 Identities=17% Similarity=0.213 Sum_probs=157.3
Q ss_pred eeeehhhhccc-CCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004998 63 RKHSDGVELTH-GDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~Ls~-l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
|...|..+|.. ..+.||+++.+ ++...+ .+.+|||| +..+..+++.. ++..+++.+++.++.||.++|.+
T Consensus 80 ri~~El~~L~~~gG~~ni~~~~~-~~rnnd---~v~ivlp~~~H~~f~~l~~~----l~~~~i~~Yl~~ll~Al~~~h~~ 151 (418)
T KOG1167|consen 80 RILNELEMLYRLGGSDNIIKLNG-CFRNND---QVAIVLPYFEHDRFRDLYRS----LSLAEIRWYLRNLLKALAHLHKN 151 (418)
T ss_pred HHHHHHHHHHHhccchhhhcchh-hhccCC---eeEEEecccCccCHHHHHhc----CCHHHHHHHHHHHHHHhhhhhcc
Confidence 45566667777 45899999999 444433 68999999 88888888843 78999999999999999999999
Q ss_pred CceeccCCCCcEEEc-cCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004998 141 GIVVHNVRPSCFVMS-SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 141 gIvHrDLKP~NILl~-~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
|||||||||+|||.+ ..+.-.|+|||++.......-. .+ .+ +.-++.
T Consensus 152 GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~~~~----~~-----------------s~-----~~~~~~------ 199 (418)
T KOG1167|consen 152 GIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGYQQT----EH-----------------SR-----SYSGRH------ 199 (418)
T ss_pred CccccCCCccccccccccCCceEEechhHHHHHhhhhh----hh-----------------hh-----hhhccc------
Confidence 999999999999998 5678899999998531111000 00 00 000000
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcc--cCCCCccccccccCCcccCCccccCCC-CCccccchh
Q 004998 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEK--KQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYR 296 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~--~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwS 296 (720)
...+.|.. ....+... .+......+ ....+.......||++|+|||++...+ .++++||||
T Consensus 200 --------~~~~~g~~------~~~~~~~~--~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws 263 (418)
T KOG1167|consen 200 --------ATPAMGKD------VHCQSVAT--ASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWS 263 (418)
T ss_pred --------CCccccCc------cccccccc--ccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceee
Confidence 00000000 00000000 000000000 111222334578999999999998776 799999999
Q ss_pred hhhhhhhccc---cCCCCchHHHHHHHh---------h-----cCC--C-------------------------C-----
Q 004998 297 LGVLLFELFC---PFSTGEEKTRTMSSL---------R-----HRV--L-------------------------P----- 327 (720)
Q Consensus 297 LGvll~eLlt---pf~~~~~~~~~~~~l---------~-----~~~--~-------------------------p----- 327 (720)
.|||+.-+++ ||........+...+ + .+. + +
T Consensus 264 ~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n 343 (418)
T KOG1167|consen 264 AGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPN 343 (418)
T ss_pred ccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccccc
Confidence 9999999998 764321110000000 0 000 0 0
Q ss_pred ---ccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 328 ---PQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 328 ---~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
.......| ...+|+.+||+.||.+|.||+++|.||||...
T Consensus 344 ~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF~~~ 387 (418)
T KOG1167|consen 344 TEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFFDEA 387 (418)
T ss_pred eeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCcCCcch
Confidence 00111122 23499999999999999999999999999954
No 399
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.89 E-value=2.8e-23 Score=198.61 Aligned_cols=159 Identities=16% Similarity=0.193 Sum_probs=126.8
Q ss_pred cccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHh---CCCCCCCHHHHHHHHHHHHHHHHHHHHc-Cceecc
Q 004998 71 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLD---KPKRSVDVYECLHIFRQIVEIVYAAHSQ-GIVVHN 146 (720)
Q Consensus 71 Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~---~~~~~l~~~~~~~i~~QIl~aL~yLHs~-gIvHrD 146 (720)
......|.+|.+||..+..+ .+++.||....+|..+-+ +.+..++|..+-+|+..|+.||.|||++ .|||||
T Consensus 99 ~r~~~CPf~V~FyGa~~reg----dvwIcME~M~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRD 174 (282)
T KOG0984|consen 99 MRTVDCPFTVHFYGALFREG----DVWICMELMDTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRD 174 (282)
T ss_pred ccCCCCCeEEEeehhhhccc----cEEEeHHHhhhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhcc
Confidence 44577999999999655444 479999998889987762 3456699999999999999999999985 899999
Q ss_pred CCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccc
Q 004998 147 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 226 (720)
Q Consensus 147 LKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~ 226 (720)
+||+||||+..|+||+||||.+-.. .|- .
T Consensus 175 vKPsNiLIn~~GqVKiCDFGIsG~L------------------------------------~dS-i-------------- 203 (282)
T KOG0984|consen 175 VKPSNILINYDGQVKICDFGISGYL------------------------------------VDS-I-------------- 203 (282)
T ss_pred CCcceEEEccCCcEEEcccccceee------------------------------------hhh-h--------------
Confidence 9999999999999999999987211 010 0
Q ss_pred cCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC----CCCccccchhhhhhhh
Q 004998 227 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA----PVSCASDIYRLGVLLF 302 (720)
Q Consensus 227 q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~----~~s~~sDIwSLGvll~ 302 (720)
++.. ..|...|||||.+... .|+-+|||||||++++
T Consensus 204 ------------------Akt~----------------------daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmi 243 (282)
T KOG0984|consen 204 ------------------AKTM----------------------DAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMI 243 (282)
T ss_pred ------------------HHHH----------------------hcCCCccCChhhcCcccCcccceeehhhhhhhhhhh
Confidence 0011 2467889999998543 4999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcC
Q 004998 303 ELFC---PFSTGEEKTRTMSSLRHR 324 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~ 324 (720)
||.+ ||+.+.......+.+...
T Consensus 244 ElA~lr~PY~~w~tpF~qLkqvVee 268 (282)
T KOG0984|consen 244 EMAILRFPYESWGTPFQQLKQVVEE 268 (282)
T ss_pred hhhhccccccccCCHHHHHHHHhcC
Confidence 9998 888887777776666544
No 400
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.88 E-value=1.1e-22 Score=236.04 Aligned_cols=204 Identities=17% Similarity=0.210 Sum_probs=160.0
Q ss_pred ehhhhccc-CCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC---------------CCCCHHHHHHHHH
Q 004998 66 SDGVELTH-GDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---------------RSVDVYECLHIFR 128 (720)
Q Consensus 66 ~e~~~Ls~-l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~---------------~~l~~~~~~~i~~ 128 (720)
.|..+|.. ..|||||.+++ ++.. ...+++++|| ..|+|.++|++.. ..++..+...+..
T Consensus 350 ~El~~m~~~g~H~niv~llG-~~t~---~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~ 425 (609)
T KOG0200|consen 350 SELNVLKELGKHPNIVNLLG-ACTQ---DGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAY 425 (609)
T ss_pred HHHHHHHHhcCCcchhhhee-eecc---CCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHH
Confidence 56666666 55999999999 4444 2368999999 9999999996554 2488999999999
Q ss_pred HHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccccc
Q 004998 129 QIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRRE 208 (720)
Q Consensus 129 QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~ 208 (720)
||+.|++||++..+|||||-..|||+..+..+|++|||++++.......
T Consensus 426 QIa~GMe~L~~~~~vHRDLAaRNVLi~~~~~~kIaDFGlar~~~~~~~y------------------------------- 474 (609)
T KOG0200|consen 426 QIANGMEYLASVPCVHRDLAARNVLITKNKVIKIADFGLARDHYNKDYY------------------------------- 474 (609)
T ss_pred HHHHHHHHHhhCCccchhhhhhhEEecCCCEEEEccccceeccCCCCce-------------------------------
Confidence 9999999999999999999999999999999999998888653221000
Q ss_pred ccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCC
Q 004998 209 DLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV 288 (720)
Q Consensus 209 Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 288 (720)
. ..+ ...+. ...|||||.+....|
T Consensus 475 --------------~-------------------------~~~--------~~~~L---------P~kWmApEsl~~~~f 498 (609)
T KOG0200|consen 475 --------------R-------------------------TKS--------SAGTL---------PVKWMAPESLFDRVF 498 (609)
T ss_pred --------------E-------------------------ecC--------CCCcc---------ceeecCHHHhccCcc
Confidence 0 000 00001 234999999999889
Q ss_pred Cccccchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 289 SCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 289 s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
+.++||||+||+|||+++ ||++.......+..++.+...+......++..++++.||+.+|++||+..++.+
T Consensus 499 t~kSDVWSfGI~L~EifsLG~~PYp~~~~~~~l~~~l~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~ 574 (609)
T KOG0200|consen 499 TSKSDVWSFGILLWEIFTLGGTPYPGIPPTEELLEFLKEGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVE 574 (609)
T ss_pred cccchhhHHHHHHHHHhhCCCCCCCCCCcHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHH
Confidence 999999999999999999 888755344556677777666655555555569999999999999999999874
No 401
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.88 E-value=1e-23 Score=227.34 Aligned_cols=183 Identities=28% Similarity=0.464 Sum_probs=154.4
Q ss_pred cEEEEEec-CCCCHHHHHh--CCCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCC
Q 004998 95 PFVHAIEW-GDVSLRQWLD--KPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDS 171 (720)
Q Consensus 95 ~~~lv~E~-~ggsL~~~L~--~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~ 171 (720)
++||.|++ .-.+|.+||. ......+...++.++.|++.|++| +|.+|||+||.||++..+.++||.|||+....
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~~d~q~kIgDFgl~ts~ 406 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFSDDDQLKIGDFGLVTSQ 406 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhhccccccccccchhhhhhhhhheeec
Confidence 58999999 8889999994 344457888999999999999999 99999999999999998888998777665321
Q ss_pred CCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccc
Q 004998 172 GSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNR 251 (720)
Q Consensus 172 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g 251 (720)
.... +...++
T Consensus 407 ~~~~---------------------------------------------------~~~~~~------------------- 416 (516)
T KOG1033|consen 407 DKDE---------------------------------------------------TVAPAA------------------- 416 (516)
T ss_pred ccCC---------------------------------------------------cccchh-------------------
Confidence 1110 000000
Q ss_pred cchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhccccCCCCchHHHHHHHhhcCCCCcccc
Q 004998 252 VNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFCPFSTGEEKTRTMSSLRHRVLPPQLL 331 (720)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLltpf~~~~~~~~~~~~l~~~~~p~~~~ 331 (720)
...+..+||.|||+||++.+..|+.++||||||+|||||+.+|....+...++.+++++++||.+.
T Consensus 417 --------------a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er~~t~~d~r~g~ip~~~~ 482 (516)
T KOG1033|consen 417 --------------ASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFERIATLTDIRDGIIPPEFL 482 (516)
T ss_pred --------------hhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHHHHhhhhhhcCCCChHHh
Confidence 012336899999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCchHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004998 332 LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 332 ~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
..+|.+.+|+.+||++.|.+||++.+.--|+|.
T Consensus 483 ~d~p~e~~ll~~lls~~p~~RP~~~~~~~~~~~ 515 (516)
T KOG1033|consen 483 QDYPEEYTLLQQLLSPSPEERPSAIEVALHEFL 515 (516)
T ss_pred hcCcHHHHHHHHhcCCCcccCchHHHHhhhhhc
Confidence 999999999999999999999988777667664
No 402
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.88 E-value=5.2e-23 Score=228.70 Aligned_cols=201 Identities=15% Similarity=0.140 Sum_probs=159.3
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|+.+|++++|||+++|++ ++.... +.||++| ++|+|.++++.+...+-....+.|..||+.|+.|||.+++||
T Consensus 747 deAl~masldHpnl~RLLg-vc~~s~----~qlvtq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qrlVH 821 (1177)
T KOG1025|consen 747 DEALRMASLDHPNLLRLLG-VCMLST----LQLVTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQRLVH 821 (1177)
T ss_pred HHHHHHhcCCCchHHHHhh-hcccch----HHHHHHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcchhh
Confidence 7889999999999999999 554442 5789999 999999999777777999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||-..|||+...+++|+.|||+++....++.+..
T Consensus 822 rdLaaRNVLVksP~hvkitdfgla~ll~~d~~ey~--------------------------------------------- 856 (1177)
T KOG1025|consen 822 RDLAARNVLVKSPNHVKITDFGLAKLLAPDEKEYS--------------------------------------------- 856 (1177)
T ss_pred hhhhhhheeecCCCeEEEEecchhhccCccccccc---------------------------------------------
Confidence 99999999999999999999998865443322100
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhc
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 304 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eL 304 (720)
++. . .-.+.|||-|.+....|+.++||||+||++|||
T Consensus 857 -----------------------~~~-----------g---------K~pikwmale~i~~~~~thqSDVWsfGVtiWEl 893 (1177)
T KOG1025|consen 857 -----------------------APG-----------G---------KVPIKWMALESIRIRKYTHQSDVWSFGVTIWEL 893 (1177)
T ss_pred -----------------------ccc-----------c---------ccCcHHHHHHHhhccCCCchhhhhhhhhhHHHH
Confidence 000 0 114568999999999999999999999999999
Q ss_pred cc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 305 FC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 305 lt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
+| |+.+.... ++-..+..+..-+..+...-+..-++.+||..|+..||+++++..
T Consensus 894 mTFGa~Py~gi~~~-eI~dlle~geRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~ 952 (1177)
T KOG1025|consen 894 MTFGAKPYDGIPAE-EIPDLLEKGERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAE 952 (1177)
T ss_pred HhcCCCccCCCCHH-HhhHHHhccccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHH
Confidence 99 77765443 334444444333333333334558999999999999999988864
No 403
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.87 E-value=8.6e-22 Score=194.92 Aligned_cols=175 Identities=27% Similarity=0.336 Sum_probs=144.6
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|...+..+.|++|+++++ .+... ...+++||+ .|++|.+++......++...++.++.+++.+|.+||+.|+
T Consensus 38 ~~~e~~~~~~l~~~~i~~~~~-~~~~~---~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 113 (215)
T cd00180 38 LLREIEILKKLNHPNIVKLYG-VFEDE---NHLYLVMEYCEGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGI 113 (215)
T ss_pred HHHHHHHHHhcCCCCeeeEee-eeecC---CeEEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 446677899999999999999 44333 367999999 7799999996543458999999999999999999999999
Q ss_pred eeccCCCCcEEEcc-CCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 143 VVHNVRPSCFVMSS-FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 143 vHrDLKP~NILl~~-~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
+|+||+|.||+++. .+.++|+|||.+........
T Consensus 114 ~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~--------------------------------------------- 148 (215)
T cd00180 114 IHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS--------------------------------------------- 148 (215)
T ss_pred eccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc---------------------------------------------
Confidence 99999999999998 89999999988743211100
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-CCCccccchhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVL 300 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGvl 300 (720)
......+...|++||.+... .++.++|+|+||++
T Consensus 149 ---------------------------------------------~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~ 183 (215)
T cd00180 149 ---------------------------------------------LLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVI 183 (215)
T ss_pred ---------------------------------------------hhhcccCCCCccChhHhcccCCCCchhhhHHHHHH
Confidence 00012457789999999887 68999999999999
Q ss_pred hhhccccCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCc
Q 004998 301 LFELFCPFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSE 362 (720)
Q Consensus 301 l~eLltpf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp 362 (720)
+++| +...+++.+||..+|++||++.+++.++
T Consensus 184 ~~~l------------------------------~~~~~~l~~~l~~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 184 LYEL------------------------------PELKDLIRKMLQKDPEKRPSAKEILEHL 215 (215)
T ss_pred HHHH------------------------------HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence 9998 4456999999999999999999999875
No 404
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.85 E-value=4.2e-21 Score=198.55 Aligned_cols=202 Identities=21% Similarity=0.248 Sum_probs=155.1
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHh-----C--CCCCCCHHHHHHHHHHHHHHHHHH
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLD-----K--PKRSVDVYECLHIFRQIVEIVYAA 137 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~-----~--~~~~l~~~~~~~i~~QIl~aL~yL 137 (720)
.|...|-.+.|||++.+.++..++... -++.+.+ +-|+|..||. + ..+.++..+...++.||+.|++||
T Consensus 336 ~es~lly~~sH~nll~V~~V~ie~~~~---P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hl 412 (563)
T KOG1024|consen 336 QESMLLYGASHPNLLSVLGVSIEDYAT---PFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHL 412 (563)
T ss_pred HHHHHHhcCcCCCccceeEEEeeccCc---ceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHH
Confidence 556667789999999999966665543 3677777 7889999995 2 234578888999999999999999
Q ss_pred HHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCC
Q 004998 138 HSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 138 Hs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~ 217 (720)
|++||||.||-..|.+|++.-+|||+|..++++.=. +|+-
T Consensus 413 h~~~ViHkDiAaRNCvIdd~LqVkltDsaLSRDLFP----------------------------------~DYh------ 452 (563)
T KOG1024|consen 413 HNHGVIHKDIAARNCVIDDQLQVKLTDSALSRDLFP----------------------------------GDYH------ 452 (563)
T ss_pred HhcCcccchhhhhcceehhheeEEeccchhccccCc----------------------------------cccc------
Confidence 999999999999999999999999999998876311 1220
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhh
Q 004998 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRL 297 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSL 297 (720)
| +.|. .--...||+||.+....|+.++|+|||
T Consensus 453 -------c---------------------LGDn--------------------EnRPvkWMslEal~n~~yssasDvWsf 484 (563)
T KOG1024|consen 453 -------C---------------------LGDN--------------------ENRPVKWMSLEALQNSHYSSASDVWSF 484 (563)
T ss_pred -------c---------------------cCCC--------------------CCCcccccCHHHHhhhhhcchhhhHHH
Confidence 0 0000 011346999999999999999999999
Q ss_pred hhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHH-HHHHHcCCCCCCCCCChHHHHc
Q 004998 298 GVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 298 Gvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~-~li~~~L~~dP~~Rpta~eiL~ 360 (720)
||+||||+| |+...++. ++...+..+.. -..+..+|++. .++..||...|++||+.+|+.+
T Consensus 485 GVllWELmtlg~~PyaeIDPf-Em~~ylkdGyR-laQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~ 550 (563)
T KOG1024|consen 485 GVLLWELMTLGKLPYAEIDPF-EMEHYLKDGYR-LAQPFNCPDELFTVMACCWALLPEERPSFSQLVI 550 (563)
T ss_pred HHHHHHHHhcCCCCccccCHH-HHHHHHhccce-ecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHH
Confidence 999999999 66655543 34444444432 22334677776 9999999999999999999875
No 405
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.83 E-value=3.7e-21 Score=220.91 Aligned_cols=213 Identities=16% Similarity=0.227 Sum_probs=156.1
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
...|..+-+.+.||||+..+..+++... .+..||| .+ +|..++...+ .+...++..++.||+.||+|+|++||
T Consensus 368 i~sE~~i~~~l~h~~~~e~l~~~~~~~~----~~~~mE~~~~-Dlf~~~~~~~-~~~~~e~~c~fKqL~~Gv~y~h~~Gi 441 (601)
T KOG0590|consen 368 ITSEFCIGSSLSHPNIIETLDIVQEIDG----ILQSMEYCPY-DLFSLVMSNG-KLTPLEADCFFKQLLRGVKYLHSMGL 441 (601)
T ss_pred hhhheeecccccCCchhhhHHHHhhccc----chhhhhcccH-HHHHHHhccc-ccchhhhhHHHHHHHHHHHHHHhcCc
Confidence 3366667778999999988884443332 2334999 55 9999985543 48999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
.||||||+|+++...|.+|++|||.+..+-.+.-.
T Consensus 442 ahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~--------------------------------------------- 476 (601)
T KOG0590|consen 442 AHRDLKLENLLVTENGILKIIDFGAASVFRYPWEK--------------------------------------------- 476 (601)
T ss_pred eeccCccccEEEecCCceEEeecCcceeeccCcch---------------------------------------------
Confidence 99999999999999999999999998543221000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCc-cccchhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSC-ASDIYRLGVLL 301 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~-~sDIwSLGvll 301 (720)
... .....+|+..|+|||++.+..|.+ ..||||.|+++
T Consensus 477 ----------------------~~~-------------------~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~ 515 (601)
T KOG0590|consen 477 ----------------------NIH-------------------ESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIY 515 (601)
T ss_pred ----------------------hhh-------------------hhcCcccCCcCcCcccccccccCcchhhhhhccceE
Confidence 000 011258899999999999999865 78999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhh---c---CCCCccccccCchHH-HHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004998 302 FELFC---PFSTGEEKTRTMSSLR---H---RVLPPQLLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~---~---~~~p~~~~~~~p~~~-~li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
+.|.+ ||.........+.... + ..-+..++...|... .+|-+||++||.+|.|+++|++.+||+...
T Consensus 516 ~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~~i~ 592 (601)
T KOG0590|consen 516 ICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILNDEWIRSIE 592 (601)
T ss_pred EEEecCCCccccccccccchhhhccccccccccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhhChHhhhcc
Confidence 99999 4432211111101111 1 111233444555554 899999999999999999999999999763
No 406
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.81 E-value=2.7e-20 Score=184.68 Aligned_cols=180 Identities=16% Similarity=0.206 Sum_probs=136.1
Q ss_pred CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEE
Q 004998 75 DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFV 153 (720)
Q Consensus 75 ~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NIL 153 (720)
.|.|||.-|++.|+..+ .++++||| +-|+|+.-+...+ +.+...+.++.|++.|++|+|+.++||||||.+|||
T Consensus 79 ~H~hIi~tY~vaFqt~d---~YvF~qE~aP~gdL~snv~~~G--igE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiL 153 (378)
T KOG1345|consen 79 PHQHIIDTYEVAFQTSD---AYVFVQEFAPRGDLRSNVEAAG--IGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENIL 153 (378)
T ss_pred cchhhhHHHHHHhhcCc---eEEEeeccCccchhhhhcCccc--ccHHHHHHHHHHHHHHHHHhhccchhhcccccceEE
Confidence 49999999998887765 67899999 9999999775433 899999999999999999999999999999999999
Q ss_pred Ec--cCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccCCCc
Q 004998 154 MS--SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSA 231 (720)
Q Consensus 154 l~--~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~ 231 (720)
|- +..+|||||||.....|...-
T Consensus 154 if~~df~rvKlcDFG~t~k~g~tV~------------------------------------------------------- 178 (378)
T KOG1345|consen 154 IFDADFYRVKLCDFGLTRKVGTTVK------------------------------------------------------- 178 (378)
T ss_pred EecCCccEEEeeecccccccCceeh-------------------------------------------------------
Confidence 96 445789988887743322100
Q ss_pred cccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC-----CCccccchhhhhhhhhccc
Q 004998 232 YGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-----VSCASDIYRLGVLLFELFC 306 (720)
Q Consensus 232 ~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-----~s~~sDIwSLGvll~eLlt 306 (720)
..-.+..|.+||++.... ..+.+|||.||+++|.+|+
T Consensus 179 --------------------------------------~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~clt 220 (378)
T KOG1345|consen 179 --------------------------------------YLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLT 220 (378)
T ss_pred --------------------------------------hhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeec
Confidence 011255689999874332 6889999999999999999
Q ss_pred cCCCCc------hHHHHHHHhh---cCCCCccccccCchHHHHHHHcCCCCCCCC
Q 004998 307 PFSTGE------EKTRTMSSLR---HRVLPPQLLLKFPKEASFCLWLLHPEPSGR 352 (720)
Q Consensus 307 pf~~~~------~~~~~~~~l~---~~~~p~~~~~~~p~~~~li~~~L~~dP~~R 352 (720)
+-.++. .....+.... ...+|..+....+....+.++-|.++|++|
T Consensus 221 G~~PWQka~~~d~~Y~~~~~w~~rk~~~~P~~F~~fs~~a~r~Fkk~lt~~~~dr 275 (378)
T KOG1345|consen 221 GKFPWQKASIMDKPYWEWEQWLKRKNPALPKKFNPFSEKALRLFKKSLTPRFKDR 275 (378)
T ss_pred CCCcchhhhccCchHHHHHHHhcccCccCchhhcccCHHHHHHHHHhcCCccccc
Confidence 433331 1112222222 234566666677788899999999999999
No 407
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.79 E-value=3.8e-19 Score=184.65 Aligned_cols=227 Identities=17% Similarity=0.203 Sum_probs=150.2
Q ss_pred CccccccccccCCCCccceeee-ehhhhcccCCCCCceecccceeecCC------------------------CCCcEEE
Q 004998 44 LLRGERFGVRGDDSNDFELRKH-SDGVELTHGDHLRNQGGLSGVCENEA------------------------AIDPFVH 98 (720)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~r~~-~e~~~Ls~l~HpnIV~l~~~~~~~~~------------------------~~~~~~l 98 (720)
.+|+.+....+++ +...||.- +..+.|. .|||||+++..|+. .. +...+|+
T Consensus 245 lvPa~~~a~~~e~-~~~t~R~l~nqtvhLa--~HPNIvri~~aF~d-sv~~lPda~~~YPdalp~R~~p~g~g~~~tlyl 320 (598)
T KOG4158|consen 245 LVPAPNAAKLLEG-QMGTFRPLPNQTVHLA--KHPNIVRIQTAFID-SVKVLPDAIERYPDALPARWYPSGAGEPKTLYL 320 (598)
T ss_pred ccCcchhhhhccc-ccceeeeCCCCCcccC--CCCCEEeehhhhhh-hhccCCchhhhCcccccceecccccCCCceEEE
Confidence 3344433333333 34445544 4444454 59999999995442 21 1123799
Q ss_pred EEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEc--cCC--ceEEeccCcccCCCCC
Q 004998 99 AIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMS--SFN--HVSFIESASCSDSGSD 174 (720)
Q Consensus 99 v~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~--~~~--~vkliDfg~a~~~g~~ 174 (720)
||.-...+|+++|.... .+......|+.|+++|+.|||.+||.|||||.+|||+. +++ .+.+.|||+|-.-..-
T Consensus 321 vMkrY~~tLr~yl~~~~--~s~r~~~~~laQlLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~h 398 (598)
T KOG4158|consen 321 VMKRYRQTLREYLWTRH--RSYRTGRVILAQLLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNH 398 (598)
T ss_pred ehhcchhhHHHHHhcCC--CchHHHHHHHHHHHHHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccceeeecccc
Confidence 99987789999995544 67888899999999999999999999999999999995 333 4788888888221100
Q ss_pred CcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccch
Q 004998 175 SHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNV 254 (720)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~ 254 (720)
|...+. .....|.
T Consensus 399 ----------------------------------------------------------Glqlpy-----~S~~Vd~---- 411 (598)
T KOG4158|consen 399 ----------------------------------------------------------GLQLPY-----ESDEVDL---- 411 (598)
T ss_pred ----------------------------------------------------------cccccc-----ccccccC----
Confidence 000000 0111222
Q ss_pred hhhhcccCCCCccccccccCCcccCCccccCCC------CCccccchhhhhhhhhccc---cCCCCchHHHHHHHhhcCC
Q 004998 255 EQVEEKKQPFPMKQILLMETNWYASPEELAGAP------VSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRV 325 (720)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~------~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~ 325 (720)
-|...-||||+....+ --.++|.|+.|.+.||+++ ||....+..-.....++..
T Consensus 412 -----------------GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yqe~q 474 (598)
T KOG4158|consen 412 -----------------GGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQESQ 474 (598)
T ss_pred -----------------CCcceecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhhhhh
Confidence 3677889999986544 1247899999999999998 8887433222222244445
Q ss_pred CCccccccCchHHHHHHHcCCCCCCCCCCh---HHHHc
Q 004998 326 LPPQLLLKFPKEASFCLWLLHPEPSGRPKM---GELLQ 360 (720)
Q Consensus 326 ~p~~~~~~~p~~~~li~~~L~~dP~~Rpta---~eiL~ 360 (720)
+|+-.....|...+++..+|++||++|++. +-+|+
T Consensus 475 LPalp~~vpp~~rqlV~~lL~r~pskRvsp~iAANvl~ 512 (598)
T KOG4158|consen 475 LPALPSRVPPVARQLVFDLLKRDPSKRVSPNIAANVLN 512 (598)
T ss_pred CCCCcccCChHHHHHHHHHhcCCccccCCccHHHhHHH
Confidence 555444444555699999999999999874 44554
No 408
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.79 E-value=6.1e-19 Score=177.82 Aligned_cols=169 Identities=25% Similarity=0.290 Sum_probs=131.0
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
...|...+.+++|+||+++++ .+... ...++++|+ .+++|.+++......+++..+..++.|++.+|.+||++|+
T Consensus 44 ~~~e~~~~~~~~~~~i~~~~~-~~~~~---~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i 119 (225)
T smart00221 44 FLREIRILKKLKHPNIVKLYG-VFEDP---EPLYLVMEYCEGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLGI 119 (225)
T ss_pred HHHHHHHHHhCCCCChhhhee-eeecC---CceEEEEeccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 335666888899999999999 44433 257999999 7779999995443338999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+|+||+|.||+++.++.++|+|||.+....... .+
T Consensus 120 ~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~--------------------------------~~------------- 154 (225)
T smart00221 120 VHRDLKPENILLGMDGLVKLADFGLARFIHRDL--------------------------------AA------------- 154 (225)
T ss_pred ecCCCCHHHEEEcCCCCEEEeeCceeeEecCcc--------------------------------cc-------------
Confidence 999999999999999999999998874321110 00
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccc-cCCCCCccccchhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEEL-AGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l-~~~~~s~~sDIwSLGvll 301 (720)
......++..|++||.+ ....++.++|||+||+++
T Consensus 155 --------------------------------------------~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~ 190 (225)
T smart00221 155 --------------------------------------------LLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVIL 190 (225)
T ss_pred --------------------------------------------cccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHH
Confidence 00013567889999998 555688899999999999
Q ss_pred hhccc---cCCC-CchHHHHHHHhhcCC
Q 004998 302 FELFC---PFST-GEEKTRTMSSLRHRV 325 (720)
Q Consensus 302 ~eLlt---pf~~-~~~~~~~~~~l~~~~ 325 (720)
|+|++ ||.. .+....++..+..+.
T Consensus 191 ~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 218 (225)
T smart00221 191 YELLWGPEPFSGEGEFTSLLSDVWSFGV 218 (225)
T ss_pred HHHHHCCCCccccchhHHHHHHHHhcCC
Confidence 99999 6755 344445666666554
No 409
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.71 E-value=6.4e-17 Score=169.89 Aligned_cols=217 Identities=23% Similarity=0.280 Sum_probs=159.3
Q ss_pred eeeehhhhcccCCCC-CceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC--CCCCHHHHHHHHHHHHHHHHHHH
Q 004998 63 RKHSDGVELTHGDHL-RNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK--RSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 63 r~~~e~~~Ls~l~Hp-nIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~--~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
...+|..+++.+.|+ +|+++++ .+.... ..++++++ .+++|.+++.... ..++...+..++.|++.++.|+|
T Consensus 43 ~~~~e~~~~~~~~~~~~i~~~~~-~~~~~~---~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H 118 (384)
T COG0515 43 RFLREIQILASLNHPPNIVKLYD-FFQDEG---SLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLH 118 (384)
T ss_pred HHHHHHHHHHHccCCcceeeEEE-EEecCC---EEEEEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHH
Confidence 444667789999999 7999999 443332 37999999 9999998775543 25999999999999999999999
Q ss_pred HcCceeccCCCCcEEEccCC-ceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCC
Q 004998 139 SQGIVVHNVRPSCFVMSSFN-HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~~~~-~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~ 217 (720)
+.|++|||+||+||+++..+ .++++|||.+......... .
T Consensus 119 ~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~--------------------------------~------- 159 (384)
T COG0515 119 SKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGST--------------------------------S------- 159 (384)
T ss_pred hCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCCcc--------------------------------c-------
Confidence 99999999999999999888 7999999987432111000 0
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC---CCCCccccc
Q 004998 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG---APVSCASDI 294 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~---~~~s~~sDI 294 (720)
..........||.+|+|||.+.+ ..+....|+
T Consensus 160 ---------------------------------------------~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~ 194 (384)
T COG0515 160 ---------------------------------------------SIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDI 194 (384)
T ss_pred ---------------------------------------------cccccccccccccccCCHHHhcCCCCCCCCchHhH
Confidence 00000112578999999999988 568999999
Q ss_pred hhhhhhhhhccc---cCCCCch---HHHHHHHhhcCCCC---ccccccC-----chHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 295 YRLGVLLFELFC---PFSTGEE---KTRTMSSLRHRVLP---PQLLLKF-----PKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 295 wSLGvll~eLlt---pf~~~~~---~~~~~~~l~~~~~p---~~~~~~~-----p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|++|++++++++ ||..... .......+.....+ ....... ....+++..++..+|..|.+..+...
T Consensus 195 ~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 274 (384)
T COG0515 195 WSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLS 274 (384)
T ss_pred HHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCcccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhh
Confidence 999999999888 5554442 33444444443322 1222221 24459999999999999999999888
Q ss_pred CcccCCC
Q 004998 361 SEFLNEP 367 (720)
Q Consensus 361 hp~~~~~ 367 (720)
+++....
T Consensus 275 ~~~~~~~ 281 (384)
T COG0515 275 HDLLAHL 281 (384)
T ss_pred chHhhCc
Confidence 7665554
No 410
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.71 E-value=2.8e-18 Score=188.91 Aligned_cols=213 Identities=17% Similarity=0.208 Sum_probs=161.8
Q ss_pred eeeehhhhcccCC-CCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004998 63 RKHSDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~Ls~l~-HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+...|..++...+ ||.+|++.. .++.+. ..++++++ .|+.|...+.+. ..+.+.....+...++-+++++|+.
T Consensus 42 ~t~~er~il~~~~~~~f~v~lhy-afqt~~---kl~l~ld~~rgg~lft~l~~~-~~f~~~~~~~~~aelaLald~lh~l 116 (612)
T KOG0603|consen 42 HTKQERIILAFVHNTPFLVKLHY-AFQTDG---KLYLILDFLRGGDLFTRLSKE-VMFDELDVAFYLAELALALDHLHKL 116 (612)
T ss_pred ccccHHHHHhhccCCCceeeeee-eecccc---chhHhhhhcccchhhhccccC-CchHHHHHHHHHHHHHHHHhhcchh
Confidence 5556777888877 999999998 455544 46899999 888999888444 3488999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004998 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+|||+|++||+++.+|++++.|||..+..-
T Consensus 117 ~iiyrd~k~enilld~~Ghi~~tdfglske~v------------------------------------------------ 148 (612)
T KOG0603|consen 117 GIAYRDYKLENVLLLLEGHIKLTDFGLSKEAV------------------------------------------------ 148 (612)
T ss_pred HHHHhcccccceeecccCccccCCchhhhHhH------------------------------------------------
Confidence 99999999999999999999998777663210
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhh
Q 004998 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
+. ...+||..|||||+++ ....++|.||+|++
T Consensus 149 -------------------------------------~~---------~~~cgt~eymApEI~~--gh~~a~D~ws~gvl 180 (612)
T KOG0603|consen 149 -------------------------------------KE---------KIACGTYEYRAPEIIN--GHLSAADWWSFGVL 180 (612)
T ss_pred -------------------------------------hh---------hhcccchhhhhhHhhh--ccCCcccchhhhhh
Confidence 00 0127899999999998 56899999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCC-ccch
Q 004998 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP-RDSM 371 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~-~~~l 371 (720)
+|||++ ||.+ ..+..|....++ .....++...+++..++..+|..|. -+.|+++|+||... +..+
T Consensus 181 ~felltg~~pf~~-----~~~~~Il~~~~~-~p~~l~~~a~~~~~~l~~r~p~nrLg~~~~~~~eik~h~f~~~i~~~~l 254 (612)
T KOG0603|consen 181 AFELLTGTLPFGG-----DTMKRILKAELE-MPRELSAEARSLFRQLFKRNPENRLGAGPDGVDEIKQHEFFQSIDWNEL 254 (612)
T ss_pred HHHHhhCCCCCch-----HHHHHHhhhccC-CchhhhHHHHHHHHHHHhhCHHHHhccCcchhHHHhccchheeeeHhhH
Confidence 999999 6665 344444332111 1112234445899999999999995 46899999999987 4445
Q ss_pred HHHHHHHHHhh
Q 004998 372 EEREAAIELRE 382 (720)
Q Consensus 372 ~e~~~~~~~~e 382 (720)
..+....++..
T Consensus 255 ~~r~~~~~fkp 265 (612)
T KOG0603|consen 255 EARSRPPPFKP 265 (612)
T ss_pred hhcCCCCCCCC
Confidence 55555444444
No 411
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.67 E-value=1e-17 Score=192.50 Aligned_cols=202 Identities=19% Similarity=0.200 Sum_probs=141.0
Q ss_pred cccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCC
Q 004998 71 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPS 150 (720)
Q Consensus 71 Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~ 150 (720)
..-++|||.+++-- +..... ..|+|-+|--.+|.|.|..+ .-+...+.+-|+.||+.||.-+|..||+|+|||.+
T Consensus 75 ~~l~~~pn~lPfqk-~~~t~k---AAylvRqyvkhnLyDRlSTR-PFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsE 149 (1431)
T KOG1240|consen 75 FALMKAPNCLPFQK-VLVTDK---AAYLVRQYVKHNLYDRLSTR-PFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSE 149 (1431)
T ss_pred HHhhcCCcccchHH-HHHhhH---HHHHHHHHHhhhhhhhhccc-hHHHHHHHHHHHHHHHHHHHHHHHcCccccccccc
Confidence 55678999999877 443443 34888899777999999332 33788999999999999999999999999999999
Q ss_pred cEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccCCC
Q 004998 151 CFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSS 230 (720)
Q Consensus 151 NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~ 230 (720)
||||++-+.+.|.||..-+..=.+ +|- -+||+.-.
T Consensus 150 NILiTSWNW~~LtDFAsFKPtYLP---------------------eDN--------Padf~fFF---------------- 184 (1431)
T KOG1240|consen 150 NILITSWNWLYLTDFASFKPTYLP---------------------EDN--------PADFTFFF---------------- 184 (1431)
T ss_pred eEEEeeechhhhhcccccCCccCC---------------------CCC--------cccceEEE----------------
Confidence 999999999999999754221000 000 04553211
Q ss_pred ccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC----------C-CCccccchhhhh
Q 004998 231 AYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA----------P-VSCASDIYRLGV 299 (720)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~----------~-~s~~sDIwSLGv 299 (720)
|.. ---..|+|||-+... + .+++.||||+||
T Consensus 185 ------------------DTS--------------------rRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GC 226 (1431)
T KOG1240|consen 185 ------------------DTS--------------------RRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGC 226 (1431)
T ss_pred ------------------ecC--------------------CceeeecChHhhhccccccccCCcccccChhhhhhhhhH
Confidence 111 012359999988541 1 578999999999
Q ss_pred hhhhccc-cCCCCchHHHHHHHhhc-CCCCccccccCc--hHHHHHHHcCCCCCCCCCChHHHHcC
Q 004998 300 LLFELFC-PFSTGEEKTRTMSSLRH-RVLPPQLLLKFP--KEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 300 ll~eLlt-pf~~~~~~~~~~~~l~~-~~~p~~~~~~~p--~~~~li~~~L~~dP~~Rpta~eiL~h 361 (720)
+++||++ +-+.++ ..+....-++ ...+...+..++ ....|+..|++.||++|.+|++.|+.
T Consensus 227 ViaELf~Eg~PlF~-LSQL~aYr~~~~~~~e~~Le~Ied~~~Rnlil~Mi~rdPs~RlSAedyL~~ 291 (1431)
T KOG1240|consen 227 VIAELFLEGRPLFT-LSQLLAYRSGNADDPEQLLEKIEDVSLRNLILSMIQRDPSKRLSAEDYLQK 291 (1431)
T ss_pred HHHHHHhcCCCccc-HHHHHhHhccCccCHHHHHHhCcCccHHHHHHHHHccCchhccCHHHHHHh
Confidence 9999999 222221 1222222222 223333333333 34589999999999999999999984
No 412
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.63 E-value=1.4e-16 Score=183.35 Aligned_cols=164 Identities=18% Similarity=0.241 Sum_probs=118.5
Q ss_pred HHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccccccc
Q 004998 131 VEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDL 210 (720)
Q Consensus 131 l~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Df 210 (720)
+.+++|||+-||+|||+||+|.+|+.-|++|+.|||+.+........
T Consensus 153 vla~Eylh~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~at--------------------------------- 199 (1205)
T KOG0606|consen 153 VLAVEYLHSYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLAT--------------------------------- 199 (1205)
T ss_pred hHHhHhhccCCeecCCCCCCcceeeecccccccchhhhhhhhhhccc---------------------------------
Confidence 78999999999999999999999999999999999887442211000
Q ss_pred ccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCc
Q 004998 211 QLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSC 290 (720)
Q Consensus 211 gla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~ 290 (720)
++..-.+.+...+- .....+|||.|+|||++....|+.
T Consensus 200 -----------------------------------nl~eg~I~k~t~Ef-------~dKqvcgTPeyiaPeVilrqgygk 237 (1205)
T KOG0606|consen 200 -----------------------------------NLKEGHIEKDTHEF-------QDKQVCGTPEYIAPEVILRQGYGK 237 (1205)
T ss_pred -----------------------------------hhhhcchHHHHHHh-------hhccccCCccccChhhhhhhccCC
Confidence 00000000000000 011258999999999999999999
Q ss_pred cccchhhhhhhhhccc---cCCCCchHHHHHHHhhcCC-CCccccccCchHHHHHHHcCCCCCCCCC---ChHHHHcCcc
Q 004998 291 ASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRV-LPPQLLLKFPKEASFCLWLLHPEPSGRP---KMGELLQSEF 363 (720)
Q Consensus 291 ~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~-~p~~~~~~~p~~~~li~~~L~~dP~~Rp---ta~eiL~hp~ 363 (720)
.+|+|++|+|+||.+. ||++..+..-.-..+...+ .|..-....++.+++|..+|+.+|..|. .+-++.+|+|
T Consensus 238 pvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~wpE~dea~p~Ea~dli~~LL~qnp~~Rlgt~ga~evk~h~f 317 (1205)
T KOG0606|consen 238 PVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEEDEALPPEAQDLIEQLLRQNPLCRLGTGGALEVKQHGF 317 (1205)
T ss_pred CccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhccccccCcCCCHHHHHHHHHHHHhChHhhcccchhhhhhhccc
Confidence 9999999999999987 8888766543334444433 3444333445556999999999999994 6788899999
Q ss_pred cCCCcc
Q 004998 364 LNEPRD 369 (720)
Q Consensus 364 ~~~~~~ 369 (720)
|.....
T Consensus 318 f~~LDw 323 (1205)
T KOG0606|consen 318 FQLLDW 323 (1205)
T ss_pred eeeccc
Confidence 998844
No 413
>KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification]
Probab=99.60 E-value=2.3e-15 Score=156.84 Aligned_cols=125 Identities=10% Similarity=0.128 Sum_probs=107.1
Q ss_pred hhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCC
Q 004998 580 LEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSK 658 (720)
Q Consensus 580 ~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~ 658 (720)
.+.+.+.|...+.+-+..| .+|...|.+|+|+|+|..+||||.|.++||||++.. .++..|. |.+-
T Consensus 323 lD~~~RvWDlRtgr~im~L-----~gH~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~r--------~~ly~ipAH~nl 389 (459)
T KOG0272|consen 323 LDSLGRVWDLRTGRCIMFL-----AGHIKEILSVAFSPNGYHLATGSSDNTCKVWDLRMR--------SELYTIPAHSNL 389 (459)
T ss_pred ccchhheeecccCcEEEEe-----cccccceeeEeECCCceEEeecCCCCcEEEeeeccc--------ccceecccccch
Confidence 3445566777666666666 456999999999999999999999999999999876 2455664 4778
Q ss_pred EEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceEE
Q 004998 659 LSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 659 i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
|+.|+|+|..+.+|+|||||++|+||.-.+.+++++ |.|++.++.+..|.+++||---.
T Consensus 390 VS~Vk~~p~~g~fL~TasyD~t~kiWs~~~~~~~ksLaGHe~kV~s~Dis~d~~~i~t~s~DRT~K 455 (459)
T KOG0272|consen 390 VSQVKYSPQEGYFLVTASYDNTVKIWSTRTWSPLKSLAGHEGKVISLDISPDSQAIATSSFDRTIK 455 (459)
T ss_pred hhheEecccCCeEEEEcccCcceeeecCCCcccchhhcCCccceEEEEeccCCceEEEeccCceee
Confidence 999999998889999999999999999999999987 99999999999999999996543
No 414
>KOG0275 consensus Conserved WD40 repeat-containing protein [General function prediction only]
Probab=99.60 E-value=6.3e-16 Score=155.58 Aligned_cols=112 Identities=15% Similarity=0.231 Sum_probs=97.3
Q ss_pred CCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceE--EecCCCCEEEEEEecCCCCEEEEEeCCCcEE
Q 004998 605 NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVV--EMASRSKLSSICWNSYIKSQIASSNFEGVVQ 682 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~--~~~~~~~i~~v~~~~~~~~~laS~s~D~~v~ 682 (720)
+..+.|.|..|+|||+||+|||+||-|.|||+.++ ....|+.|... .|.+...|.|++||.+ ..+||||+.||.||
T Consensus 211 g~KSh~EcA~FSPDgqyLvsgSvDGFiEVWny~~G-KlrKDLkYQAqd~fMMmd~aVlci~FSRD-sEMlAsGsqDGkIK 288 (508)
T KOG0275|consen 211 GQKSHVECARFSPDGQYLVSGSVDGFIEVWNYTTG-KLRKDLKYQAQDNFMMMDDAVLCISFSRD-SEMLASGSQDGKIK 288 (508)
T ss_pred ccccchhheeeCCCCceEeeccccceeeeehhccc-hhhhhhhhhhhcceeecccceEEEeeccc-HHHhhccCcCCcEE
Confidence 34577999999999999999999999999999887 23345556553 5677889999999995 56999999999999
Q ss_pred EEECCCCcEEEE--------EEEEeecCCceEEEecCccceEEc
Q 004998 683 VGQVLHLIYFSA--------LYCIVLNKLLIIFRYGMFQEVKYL 718 (720)
Q Consensus 683 lWDv~tg~~~~~--------v~~v~~~~~~~~~~~~~~~~~~~~ 718 (720)
||-+.||+|++. |.|+.|+++++.+.+++||.+..+
T Consensus 289 vWri~tG~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~tvRi 332 (508)
T KOG0275|consen 289 VWRIETGQCLRRFDRAHTKGVTCLSFSRDNSQILSASFDQTVRI 332 (508)
T ss_pred EEEEecchHHHHhhhhhccCeeEEEEccCcchhhcccccceEEE
Confidence 999999999985 999999999999999999997653
No 415
>KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown]
Probab=99.59 E-value=4.2e-15 Score=152.98 Aligned_cols=118 Identities=11% Similarity=0.175 Sum_probs=97.6
Q ss_pred ccccceEEeeeec-cCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEE
Q 004998 587 LSFSKLRVKADLN-QGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICW 664 (720)
Q Consensus 587 ~~~~~~~~~~~l~-~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~v~~ 664 (720)
..---|||.+..+ ...+.||...|-|++|+|+|..|||||.|.|+|+||+.+. .|...+ .|.+.|.||+|
T Consensus 94 qpqavfrvrpvtrCssS~~GH~e~Vl~~~fsp~g~~l~tGsGD~TvR~WD~~Te--------Tp~~t~KgH~~WVlcvaw 165 (480)
T KOG0271|consen 94 QPQAVFRVRPVTRCSSSIAGHGEAVLSVQFSPTGSRLVTGSGDTTVRLWDLDTE--------TPLFTCKGHKNWVLCVAW 165 (480)
T ss_pred ccchhhcccccceeccccCCCCCcEEEEEecCCCceEEecCCCceEEeeccCCC--------CcceeecCCccEEEEEEE
Confidence 3344567777777 6789999999999999999999999999999999999876 366555 45889999999
Q ss_pred ecCCCCEEEEEeCCCcEEEEECCCCcEEEE--------EEEEeecC-----CceEEEecCcc
Q 004998 665 NSYIKSQIASSNFEGVVQVGQVLHLIYFSA--------LYCIVLNK-----LLIIFRYGMFQ 713 (720)
Q Consensus 665 ~~~~~~~laS~s~D~~v~lWDv~tg~~~~~--------v~~v~~~~-----~~~~~~~~~~~ 713 (720)
+|++ ..||||+.||+|++||..+|+++.. |.+++|.| .+-.++++|=|
T Consensus 166 sPDg-k~iASG~~dg~I~lwdpktg~~~g~~l~gH~K~It~Lawep~hl~p~~r~las~skD 226 (480)
T KOG0271|consen 166 SPDG-KKIASGSKDGSIRLWDPKTGQQIGRALRGHKKWITALAWEPLHLVPPCRRLASSSKD 226 (480)
T ss_pred CCCc-chhhccccCCeEEEecCCCCCcccccccCcccceeEEeecccccCCCccceecccCC
Confidence 9975 5999999999999999999998865 88888854 44455555544
No 416
>KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown]
Probab=99.57 E-value=7.5e-15 Score=151.15 Aligned_cols=109 Identities=16% Similarity=0.177 Sum_probs=93.7
Q ss_pred CCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcE
Q 004998 602 DLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVV 681 (720)
Q Consensus 602 ~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~v 681 (720)
.+.+|...|+.|.|+||+.|+||||.|+.||+||.+++. +--..-+|=..|+.|+|+.+. .+|+|||.|.|+
T Consensus 362 rmtgHq~lVn~V~fSPd~r~IASaSFDkSVkLW~g~tGk-------~lasfRGHv~~VYqvawsaDs-RLlVS~SkDsTL 433 (480)
T KOG0271|consen 362 RMTGHQALVNHVSFSPDGRYIASASFDKSVKLWDGRTGK-------FLASFRGHVAAVYQVAWSADS-RLLVSGSKDSTL 433 (480)
T ss_pred hhhchhhheeeEEECCCccEEEEeecccceeeeeCCCcc-------hhhhhhhccceeEEEEeccCc-cEEEEcCCCceE
Confidence 456789999999999999999999999999999988872 111122345689999999964 599999999999
Q ss_pred EEEECCCCcEEEE-------EEEEeecCCceEEEecCccceEEc
Q 004998 682 QVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVKYL 718 (720)
Q Consensus 682 ~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~~~ 718 (720)
|||||+|.+..+. |++|+|+|+|.-..+|=-|+|..|
T Consensus 434 Kvw~V~tkKl~~DLpGh~DEVf~vDwspDG~rV~sggkdkv~~l 477 (480)
T KOG0271|consen 434 KVWDVRTKKLKQDLPGHADEVFAVDWSPDGQRVASGGKDKVLRL 477 (480)
T ss_pred EEEEeeeeeecccCCCCCceEEEEEecCCCceeecCCCceEEEe
Confidence 9999999887765 999999999999999999998765
No 417
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.57 E-value=3.9e-15 Score=161.22 Aligned_cols=93 Identities=16% Similarity=0.132 Sum_probs=75.7
Q ss_pred eeeehhhhcccCCCCCcee-cccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004998 63 RKHSDGVELTHGDHLRNQG-GLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~-l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+..+|..+|.+++|+||+. +++ .+ ..|+|||| .|++|.. + .. .. ...++.|++.+|.|||++
T Consensus 67 ~~~~E~~iL~~L~h~~iv~~l~~----~~----~~~LVmE~~~G~~L~~-~-~~---~~---~~~~~~~i~~aL~~lH~~ 130 (365)
T PRK09188 67 LAAREIRALKTVRGIGVVPQLLA----TG----KDGLVRGWTEGVPLHL-A-RP---HG---DPAWFRSAHRALRDLHRA 130 (365)
T ss_pred HHHHHHHHHHhccCCCCCcEEEE----cC----CcEEEEEccCCCCHHH-h-Cc---cc---hHHHHHHHHHHHHHHHHC
Confidence 3458888999999999985 443 11 36999999 8899973 2 11 11 146889999999999999
Q ss_pred CceeccC-CCCcEEEccCCceEEeccCcccCC
Q 004998 141 GIVVHNV-RPSCFVMSSFNHVSFIESASCSDS 171 (720)
Q Consensus 141 gIvHrDL-KP~NILl~~~~~vkliDfg~a~~~ 171 (720)
||+|||| ||+|||++.++.++|+|||+++.+
T Consensus 131 gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~~ 162 (365)
T PRK09188 131 GITHNDLAKPQNWLMGPDGEAAVIDFQLASVF 162 (365)
T ss_pred CCeeCCCCCcceEEEcCCCCEEEEECccceec
Confidence 9999999 999999998999999999998654
No 418
>KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms]
Probab=99.56 E-value=1.7e-14 Score=143.55 Aligned_cols=112 Identities=15% Similarity=0.197 Sum_probs=92.2
Q ss_pred CCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCC-CCEEEEEeCCC
Q 004998 601 GDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYI-KSQIASSNFEG 679 (720)
Q Consensus 601 ~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~-~~~laS~s~D~ 679 (720)
..|.||+..|.||+|++|...|+|||.|+||++||.-... .|.+.+..+++.|+||+|+|.. ..+|+|+|.|+
T Consensus 99 ~~f~GH~~dVlsva~s~dn~qivSGSrDkTiklwnt~g~c------k~t~~~~~~~~WVscvrfsP~~~~p~Ivs~s~Dk 172 (315)
T KOG0279|consen 99 RRFVGHTKDVLSVAFSTDNRQIVSGSRDKTIKLWNTLGVC------KYTIHEDSHREWVSCVRFSPNESNPIIVSASWDK 172 (315)
T ss_pred EEEEecCCceEEEEecCCCceeecCCCcceeeeeeecccE------EEEEecCCCcCcEEEEEEcCCCCCcEEEEccCCc
Confidence 3467889999999999999999999999999999965431 1223333337889999999974 56999999999
Q ss_pred cEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceEEc
Q 004998 680 VVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVKYL 718 (720)
Q Consensus 680 ~v~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~~~ 718 (720)
+|||||+++-+...+ ++.|++||+|++..||==|-..+|
T Consensus 173 tvKvWnl~~~~l~~~~~gh~~~v~t~~vSpDGslcasGgkdg~~~L 218 (315)
T KOG0279|consen 173 TVKVWNLRNCQLRTTFIGHSGYVNTVTVSPDGSLCASGGKDGEAML 218 (315)
T ss_pred eEEEEccCCcchhhccccccccEEEEEECCCCCEEecCCCCceEEE
Confidence 999999998876655 899999999999999976655554
No 419
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.55 E-value=5.6e-14 Score=151.46 Aligned_cols=213 Identities=16% Similarity=0.097 Sum_probs=140.4
Q ss_pred eeeehhhhcccCCC----CCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHH
Q 004998 63 RKHSDGVELTHGDH----LRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAA 137 (720)
Q Consensus 63 r~~~e~~~Ls~l~H----pnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~yL 137 (720)
+...|..+|..+.. +++..+++... .....-|+||+..|.+|.++.+.. .+.++...+..|+.|++.+|.+|
T Consensus 62 ~l~~E~~vl~~l~~~~~~~~~~~~~~~G~---~~~~~~~iVM~l~G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~l 138 (322)
T KOG1164|consen 62 VLKIEIQVLKKLEKKNGPSHFPKLLDHGR---STEDFNFIVMSLLGPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDL 138 (322)
T ss_pred cchhHHHHHHHHhhhcCCCCCCEEEEecc---CCCceeEEEEeccCccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHH
Confidence 33456667777653 57777777221 233367999999999999987433 36799999999999999999999
Q ss_pred HHcCceeccCCCCcEEEccC-----CceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccccccccc
Q 004998 138 HSQGIVVHNVRPSCFVMSSF-----NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQL 212 (720)
Q Consensus 138 Hs~gIvHrDLKP~NILl~~~-----~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgl 212 (720)
|+.|++||||||+|+++... ..+.++|||+++.+... .+.|-
T Consensus 139 H~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~~~~~---------------------------------~~~~~ 185 (322)
T KOG1164|consen 139 HSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARRFKYV---------------------------------GDSGG 185 (322)
T ss_pred HhcCcccCCcCHHHeeecCCCCcccceEEEEecCCCcccccc---------------------------------CCCCc
Confidence 99999999999999999854 46899999998632110 00000
Q ss_pred ccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCcc--ccccccCCcccCCccccCCCCCc
Q 004998 213 VTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMK--QILLMETNWYASPEELAGAPVSC 290 (720)
Q Consensus 213 a~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~--~~~~~GT~~Y~APE~l~~~~~s~ 290 (720)
. ..+.+ .....||..|+++....+...+.
T Consensus 186 ~-------------------------------------------------~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r 216 (322)
T KOG1164|consen 186 N-------------------------------------------------LRPPRPQKGLFRGTLRYASINVHLGIEQGR 216 (322)
T ss_pred c-------------------------------------------------cccCCCCccCCCCccccccHHHhCCCccCC
Confidence 0 00000 01246999999999999999999
Q ss_pred cccchhhhhhhhhccc---cCCCCchH--HHHHHHhhcCCCCccccccCchHH-HHHHHcCCCCCCCCCChHHHHc
Q 004998 291 ASDIYRLGVLLFELFC---PFSTGEEK--TRTMSSLRHRVLPPQLLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 291 ~sDIwSLGvll~eLlt---pf~~~~~~--~~~~~~l~~~~~p~~~~~~~p~~~-~li~~~L~~dP~~Rpta~eiL~ 360 (720)
+.|+||++-++.||+. ||...... ...+...........+....|.+. .+...+-..+...+|....+..
T Consensus 217 ~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~ 292 (322)
T KOG1164|consen 217 RDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKDPRKLLTDRFGDLKPEEFAKILEYIDSLDYEDKPDYEKLAE 292 (322)
T ss_pred chhhhhHHHHHHHHhcCCCCCccccccchHHHHHHHhhhhccccccCCChHHHHHHHHHhhccCCcCCCCHHHHHH
Confidence 9999999999999997 55443321 111222221111111222233333 4555555567777776655543
No 420
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.55 E-value=6.4e-15 Score=146.50 Aligned_cols=195 Identities=16% Similarity=0.126 Sum_probs=144.5
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHcC-c
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQG-I 142 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~yLHs~g-I 142 (720)
.|.-.|.-+.||||+.+++ .|.... ...++..| +-++|...|... +-.++..++..++.+|+.|+.|||+.. +
T Consensus 236 eefp~lrifshpnilpvlg-acnspp---nlv~isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ 311 (448)
T KOG0195|consen 236 EEFPALRIFSHPNILPVLG-ACNSPP---NLVIISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPM 311 (448)
T ss_pred hhCcceeeecCCchhhhhh-hccCCC---CceEeeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchh
Confidence 4444567788999999999 555554 45777788 888999999433 334678899999999999999999853 3
Q ss_pred -eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 143 -VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 143 -vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
----|....++|+++-+.+|.= + .+-|.+
T Consensus 312 ipr~~lns~hvmidedltarism---a--------------------------------------d~kfsf--------- 341 (448)
T KOG0195|consen 312 IPRFYLNSKHVMIDEDLTARISM---A--------------------------------------DTKFSF--------- 341 (448)
T ss_pred hhhhhcccceEEecchhhhheec---c--------------------------------------cceeee---------
Confidence 3345777788888777666520 0 011100
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCC---Cccccchhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV---SCASDIYRLG 298 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~---s~~sDIwSLG 298 (720)
+..-..-.|.||+||.+...+- -.++|+|||.
T Consensus 342 ---------------------------------------------qe~gr~y~pawmspealqrkped~n~raadmwsfa 376 (448)
T KOG0195|consen 342 ---------------------------------------------QEVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFA 376 (448)
T ss_pred ---------------------------------------------eccccccCcccCCHHHHhcCchhcchhhhhHHHHH
Confidence 0001234788999999987763 4589999999
Q ss_pred hhhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHH
Q 004998 299 VLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELL 359 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL 359 (720)
+++|||-| ||....+...-|+....+..+...+...+....|+.-|+..||.+||..+.|+
T Consensus 377 illwel~trevpfadlspmecgmkialeglrv~ippgis~hm~klm~icmnedpgkrpkfdmiv 440 (448)
T KOG0195|consen 377 ILLWELNTREVPFADLSPMECGMKIALEGLRVHIPPGISRHMNKLMNICMNEDPGKRPKFDMIV 440 (448)
T ss_pred HHHHHhhccccccccCCchhhhhhhhhccccccCCCCccHHHHHHHHHHhcCCCCcCCCcceeh
Confidence 99999999 99988887777777766655555555667778999999999999999987764
No 421
>PTZ00421 coronin; Provisional
Probab=99.54 E-value=6.6e-14 Score=158.00 Aligned_cols=113 Identities=15% Similarity=0.113 Sum_probs=94.7
Q ss_pred CCCCCCCeEEEEECC-CCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCEEEEEEecCCCCEEEEEeCCCc
Q 004998 603 LLNSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFEGV 680 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~-dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~v~~~~~~~~~laS~s~D~~ 680 (720)
+.+|.+.|.+|+|+| |+.+|||||.|++|+|||+..... ......|+..+. |..+|.+|+|+|...++||||+.|++
T Consensus 71 l~GH~~~V~~v~fsP~d~~~LaSgS~DgtIkIWdi~~~~~-~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~Dgt 149 (493)
T PTZ00421 71 LLGQEGPIIDVAFNPFDPQKLFTASEDGTIMGWGIPEEGL-TQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMV 149 (493)
T ss_pred EeCCCCCEEEEEEcCCCCCEEEEEeCCCEEEEEecCCCcc-ccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCE
Confidence 567899999999999 899999999999999999865311 011223555554 57789999999977789999999999
Q ss_pred EEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceE
Q 004998 681 VQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 681 v~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
|+|||+.+++.+.+ |++++|++.+..+++|+.|..-
T Consensus 150 VrIWDl~tg~~~~~l~~h~~~V~sla~spdG~lLatgs~Dg~I 192 (493)
T PTZ00421 150 VNVWDVERGKAVEVIKCHSDQITSLEWNLDGSLLCTTSKDKKL 192 (493)
T ss_pred EEEEECCCCeEEEEEcCCCCceEEEEEECCCCEEEEecCCCEE
Confidence 99999999988765 8999999999999999998654
No 422
>KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification]
Probab=99.54 E-value=5.3e-15 Score=154.17 Aligned_cols=124 Identities=12% Similarity=0.145 Sum_probs=103.3
Q ss_pred chhhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCC
Q 004998 578 PFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRS 657 (720)
Q Consensus 578 ~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 657 (720)
+-.++..+.|.++.=.+++ +|.||...|..|+|+|+|+||+|||.|.+-|+||+.+.... +..-+|..
T Consensus 237 ~s~Dgtvklw~~~~e~~l~-----~l~gH~~RVs~VafHPsG~~L~TasfD~tWRlWD~~tk~El-------L~QEGHs~ 304 (459)
T KOG0272|consen 237 ASADGTVKLWKLSQETPLQ-----DLEGHLARVSRVAFHPSGKFLGTASFDSTWRLWDLETKSEL-------LLQEGHSK 304 (459)
T ss_pred eccCCceeeeccCCCcchh-----hhhcchhhheeeeecCCCceeeecccccchhhcccccchhh-------Hhhccccc
Confidence 3445577777777655554 55667999999999999999999999999999999887321 12234466
Q ss_pred CEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccc
Q 004998 658 KLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 658 ~i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~ 714 (720)
.|.+|+|+|+ +.+++||+.|..-+|||++||.||+. |++|+|+|-|-.+++|+-|-
T Consensus 305 ~v~~iaf~~D-GSL~~tGGlD~~~RvWDlRtgr~im~L~gH~k~I~~V~fsPNGy~lATgs~Dn 367 (459)
T KOG0272|consen 305 GVFSIAFQPD-GSLAATGGLDSLGRVWDLRTGRCIMFLAGHIKEILSVAFSPNGYHLATGSSDN 367 (459)
T ss_pred ccceeEecCC-CceeeccCccchhheeecccCcEEEEecccccceeeEeECCCceEEeecCCCC
Confidence 7999999995 57999999999999999999999986 99999999999999999874
No 423
>KOG0266 consensus WD40 repeat-containing protein [General function prediction only]
Probab=99.54 E-value=5.1e-14 Score=158.69 Aligned_cols=108 Identities=10% Similarity=0.123 Sum_probs=93.7
Q ss_pred CCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcE
Q 004998 602 DLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVV 681 (720)
Q Consensus 602 ~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~v 681 (720)
.+.+|...|++|+|+|||+++++|+.|++|||||..... .+..+..+|...|+|++|+|.+ +.|+||++|++|
T Consensus 198 ~l~~h~~~v~~~~fs~d~~~l~s~s~D~tiriwd~~~~~------~~~~~l~gH~~~v~~~~f~p~g-~~i~Sgs~D~tv 270 (456)
T KOG0266|consen 198 ELSGHTRGVSDVAFSPDGSYLLSGSDDKTLRIWDLKDDG------RNLKTLKGHSTYVTSVAFSPDG-NLLVSGSDDGTV 270 (456)
T ss_pred cccccccceeeeEECCCCcEEEEecCCceEEEeeccCCC------eEEEEecCCCCceEEEEecCCC-CEEEEecCCCcE
Confidence 447789999999999999999999999999999983221 1223445778899999999976 899999999999
Q ss_pred EEEECCCCcEEEE-------EEEEeecCCceEEEecCccceE
Q 004998 682 QVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 682 ~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
+|||+++|+++.. |.+++|++.+..+.+++.|..-
T Consensus 271 riWd~~~~~~~~~l~~hs~~is~~~f~~d~~~l~s~s~d~~i 312 (456)
T KOG0266|consen 271 RIWDVRTGECVRKLKGHSDGISGLAFSPDGNLLVSASYDGTI 312 (456)
T ss_pred EEEeccCCeEEEeeeccCCceEEEEECCCCCEEEEcCCCccE
Confidence 9999999999886 8999999999999999988654
No 424
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.53 E-value=5.8e-15 Score=149.27 Aligned_cols=96 Identities=14% Similarity=0.111 Sum_probs=76.6
Q ss_pred eeehhhhcccCCCCCceecccceeecCCC----CCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAA----IDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~----~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
.++|+..+.++.||+|..+.+.+...... ....+++||| .|.+|.++.. +++ ....+|+.+|..+|
T Consensus 82 ~e~Ea~~l~rL~~~GI~~~~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~-----~~~----~~~~~i~~~l~~lH 152 (232)
T PRK10359 82 YENLIVQTDRVRSEGLASLNDFYLLAERKTLRYAHTYIMLIEYIEGVELNDMPE-----ISE----DVKAKIKASIESLH 152 (232)
T ss_pred HHHHHHHHHHHHHCCCCcceEeeeecccccccccCCeEEEEEEECCccHHHhhh-----ccH----HHHHHHHHHHHHHH
Confidence 35777789999999999998833322211 2357999999 9999998741 333 34669999999999
Q ss_pred HcCceeccCCCCcEEEccCCceEEeccCccc
Q 004998 139 SQGIVVHNVRPSCFVMSSFNHVSFIESASCS 169 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~~~~~vkliDfg~a~ 169 (720)
..|++|||+||+||+++++| ++++|||...
T Consensus 153 ~~gi~H~Dikp~Nili~~~g-i~liDfg~~~ 182 (232)
T PRK10359 153 QHGMVSGDPHKGNFIVSKNG-LRIIDLSGKR 182 (232)
T ss_pred HcCCccCCCChHHEEEeCCC-EEEEECCCcc
Confidence 99999999999999999888 9999998763
No 425
>KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics]
Probab=99.52 E-value=5.4e-14 Score=148.40 Aligned_cols=109 Identities=15% Similarity=0.255 Sum_probs=90.0
Q ss_pred cCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCEEEEEEecCC--------CC
Q 004998 600 QGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYI--------KS 670 (720)
Q Consensus 600 ~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~v~~~~~~--------~~ 670 (720)
-..+.||.+.|+++.|+|.|.+|||||.|+|+|||...... .+..|. |...|..+.|+|.+ +.
T Consensus 352 ~~t~~GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs~~~~~--------~~~~l~~Hskei~t~~wsp~g~v~~n~~~~~ 423 (524)
T KOG0273|consen 352 VKTFIGHHGEVNALKWNPTGSLLASCSDDGTLKIWSMGQSN--------SVHDLQAHSKEIYTIKWSPTGPVTSNPNMNL 423 (524)
T ss_pred ceeeecccCceEEEEECCCCceEEEecCCCeeEeeecCCCc--------chhhhhhhccceeeEeecCCCCccCCCcCCc
Confidence 46788899999999999999999999999999999965431 111221 23457777776654 45
Q ss_pred EEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceE
Q 004998 671 QIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 671 ~laS~s~D~~v~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
.|||++.|+||++||+..|+++.+ |++++|+|.+.++++|+||.--
T Consensus 424 ~l~sas~dstV~lwdv~~gv~i~~f~kH~~pVysvafS~~g~ylAsGs~dg~V 476 (524)
T KOG0273|consen 424 MLASASFDSTVKLWDVESGVPIHTLMKHQEPVYSVAFSPNGRYLASGSLDGCV 476 (524)
T ss_pred eEEEeecCCeEEEEEccCCceeEeeccCCCceEEEEecCCCcEEEecCCCCee
Confidence 799999999999999999999987 8999999999999999999753
No 426
>KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription]
Probab=99.52 E-value=4.8e-14 Score=157.23 Aligned_cols=119 Identities=9% Similarity=0.165 Sum_probs=101.8
Q ss_pred ccccceEEeeeec-c--CCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEE
Q 004998 587 LSFSKLRVKADLN-Q--GDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSI 662 (720)
Q Consensus 587 ~~~~~~~~~~~l~-~--~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~v 662 (720)
....+.+++++-. + .-+.+|-+-|.||+|+|+..|+||||.|++||+||..++. .|..+ +|++.|.+|
T Consensus 512 s~D~tArLWs~d~~~PlRifaghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~--------~VRiF~GH~~~V~al 583 (707)
T KOG0263|consen 512 SHDQTARLWSTDHNKPLRIFAGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGN--------SVRIFTGHKGPVTAL 583 (707)
T ss_pred CCCceeeeeecccCCchhhhcccccccceEEECCcccccccCCCCceEEEEEcCCCc--------EEEEecCCCCceEEE
Confidence 4455666777665 2 4467889999999999999999999999999999998872 35555 458899999
Q ss_pred EEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccc
Q 004998 663 CWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 663 ~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~ 714 (720)
+|||. +.+||||+.||.|+|||+.+|..+.+ |+++.|+..|..+++|+.|-
T Consensus 584 ~~Sp~-Gr~LaSg~ed~~I~iWDl~~~~~v~~l~~Ht~ti~SlsFS~dg~vLasgg~Dn 641 (707)
T KOG0263|consen 584 AFSPC-GRYLASGDEDGLIKIWDLANGSLVKQLKGHTGTIYSLSFSRDGNVLASGGADN 641 (707)
T ss_pred EEcCC-CceEeecccCCcEEEEEcCCCcchhhhhcccCceeEEEEecCCCEEEecCCCC
Confidence 99995 56999999999999999999988765 99999999999999999874
No 427
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.51 E-value=2.3e-13 Score=150.30 Aligned_cols=198 Identities=17% Similarity=0.255 Sum_probs=144.2
Q ss_pred cccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc-eeccCC
Q 004998 71 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI-VVHNVR 148 (720)
Q Consensus 71 Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI-vHrDLK 148 (720)
|..+.|.|+.++++.++ ++ ..++++.+| .-|+|.+.+......++..-...++++|+.||.|||.-.| .|+.|+
T Consensus 1 l~~l~h~n~~~f~g~~~-~~---~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~ 76 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASV-DG---PEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALK 76 (484)
T ss_pred CcccchhhhhhheeeEe-cC---CceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeec
Confidence 46789999999999544 44 367999999 8999999997767779999999999999999999998766 999999
Q ss_pred CCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccC
Q 004998 149 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 228 (720)
Q Consensus 149 P~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~ 228 (720)
+.|.+++..-.+|+.|||+....... .++..
T Consensus 77 s~nClvd~~w~lklt~~Gl~~~~~~~---------------------------------~~~~~---------------- 107 (484)
T KOG1023|consen 77 SSNCLVDSRWVLKLTDFGLNSLLEET---------------------------------AEPEA---------------- 107 (484)
T ss_pred cccceeeeeEEEEechhhhccccccc---------------------------------ccccc----------------
Confidence 99999999999999888876322100 00000
Q ss_pred CCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC-------CCccccchhhhhhh
Q 004998 229 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-------VSCASDIYRLGVLL 301 (720)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-------~s~~sDIwSLGvll 301 (720)
.....-...|.|||.+.+.. .+.+.||||+|+++
T Consensus 108 ---------------------------------------~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~ 148 (484)
T KOG1023|consen 108 ---------------------------------------HHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIM 148 (484)
T ss_pred ---------------------------------------cchhHHHHhccCHHHhcccccccccccccccCCeehHHHHH
Confidence 00011234689999997742 36789999999999
Q ss_pred hhccc---cCCCCc---hHHHHHHHhhc-CC--CCcccc-c-cCc-hHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 302 FELFC---PFSTGE---EKTRTMSSLRH-RV--LPPQLL-L-KFP-KEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt---pf~~~~---~~~~~~~~l~~-~~--~p~~~~-~-~~p-~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
+|+++ ||.... ...+....+.+ +. +.|... . ..+ ....++..||..+|..||+++++-.
T Consensus 149 ~ei~~r~~~~~~~~~~~~~~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~ 219 (484)
T KOG1023|consen 149 YEILFRSGPFDLRNLVEDPDEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIRS 219 (484)
T ss_pred HHHHhccCccccccccCChHHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHHh
Confidence 99999 776531 11233333443 21 222222 1 333 3558999999999999999988754
No 428
>PRK10345 hypothetical protein; Provisional
Probab=99.51 E-value=3.2e-14 Score=143.04 Aligned_cols=99 Identities=9% Similarity=0.099 Sum_probs=77.4
Q ss_pred eehhhhcccC-----CCCCceecccceeecCCCCCc-EEEEEecCC---CCHHHHHhCCCCCCCHHHHHHHHHHHHHHH-
Q 004998 65 HSDGVELTHG-----DHLRNQGGLSGVCENEAAIDP-FVHAIEWGD---VSLRQWLDKPKRSVDVYECLHIFRQIVEIV- 134 (720)
Q Consensus 65 ~~e~~~Ls~l-----~HpnIV~l~~~~~~~~~~~~~-~~lv~E~~g---gsL~~~L~~~~~~l~~~~~~~i~~QIl~aL- 134 (720)
.+|+.++.++ +||||+++|+ +++++..... +.+||||.| ++|.+++.+. .+++. ..++.|++.++
T Consensus 44 ~rEi~~l~~L~~~~~~h~nIvr~yg-~~et~~g~g~v~~~I~e~~G~~~~tL~~~l~~~--~~~e~--~~~~~~~L~~l~ 118 (210)
T PRK10345 44 RRELKYYAHLSRRLIDWSGIPRYYG-TVETDCGTGYVYDVIADFDGKPSITLTEFAEQC--RYEED--VAQLRQLLKKLK 118 (210)
T ss_pred HHHHHHHHHhhccCCCCcccceeeE-EEEeCCCCeEEEEEEecCCCCcchhHHHHHHcc--cccHh--HHHHHHHHHHHH
Confidence 4777788888 6899999999 6655543334 447899944 8999999553 26655 36688888888
Q ss_pred HHHHHcCceeccCCCCcEEEccC----CceEEeccCcc
Q 004998 135 YAAHSQGIVVHNVRPSCFVMSSF----NHVSFIESASC 168 (720)
Q Consensus 135 ~yLHs~gIvHrDLKP~NILl~~~----~~vkliDfg~a 168 (720)
+|||+++||||||||+|||++.. .+++|+||+.+
T Consensus 119 ~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~ 156 (210)
T PRK10345 119 RYLLDNRIVTMELKPQNILCQRISESEVIPVVCDNIGE 156 (210)
T ss_pred HHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEECCCC
Confidence 99999999999999999999743 37999995554
No 429
>PTZ00420 coronin; Provisional
Probab=99.49 E-value=3.1e-13 Score=153.67 Aligned_cols=113 Identities=19% Similarity=0.205 Sum_probs=90.6
Q ss_pred CCCCCCCeEEEEECCC-CCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCCCc
Q 004998 603 LLNSSNLVCSLSFDRD-GELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGV 680 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~d-g~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~v~~~~~~~~~laS~s~D~~ 680 (720)
+.+|.+.|.+|+|+|+ +.+|||||.|++|+|||+.+..........|+..+ .|...|.+|+|+|.+..+||||+.|++
T Consensus 70 L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~sVaf~P~g~~iLaSgS~Dgt 149 (568)
T PTZ00420 70 LKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKISIIDWNPMNYYIMCSSGFDSF 149 (568)
T ss_pred EcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCCcEEEEEECCCCCeEEEEEeCCCe
Confidence 4567999999999997 78999999999999999875311111111244444 457789999999987777899999999
Q ss_pred EEEEECCCCcEEEE------EEEEeecCCceEEEecCccce
Q 004998 681 VQVGQVLHLIYFSA------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 681 v~lWDv~tg~~~~~------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
|+|||+++++.+.+ |.|++|++.+..++.++-|..
T Consensus 150 IrIWDl~tg~~~~~i~~~~~V~SlswspdG~lLat~s~D~~ 190 (568)
T PTZ00420 150 VNIWDIENEKRAFQINMPKKLSSLKWNIKGNLLSGTCVGKH 190 (568)
T ss_pred EEEEECCCCcEEEEEecCCcEEEEEECCCCCEEEEEecCCE
Confidence 99999999986654 899999999999998887753
No 430
>KOG0318 consensus WD40 repeat stress protein/actin interacting protein [Cytoskeleton]
Probab=99.48 E-value=3.4e-13 Score=144.04 Aligned_cols=89 Identities=20% Similarity=0.363 Sum_probs=74.3
Q ss_pred eEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe----cCCCCEEEEEEecC
Q 004998 592 LRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM----ASRSKLSSICWNSY 667 (720)
Q Consensus 592 ~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~----~~~~~i~~v~~~~~ 667 (720)
||-..+++ .|+..|+||.|+|||++|||+|.||+|.|||-.++. -+.++ .|++.|..|+|+|+
T Consensus 180 FKFk~s~r-----~HskFV~~VRysPDG~~Fat~gsDgki~iyDGktge--------~vg~l~~~~aHkGsIfalsWsPD 246 (603)
T KOG0318|consen 180 FKFKSSFR-----EHSKFVNCVRYSPDGSRFATAGSDGKIYIYDGKTGE--------KVGELEDSDAHKGSIFALSWSPD 246 (603)
T ss_pred eeeeeccc-----ccccceeeEEECCCCCeEEEecCCccEEEEcCCCcc--------EEEEecCCCCccccEEEEEECCC
Confidence 44455555 358899999999999999999999999999987762 22232 45888999999996
Q ss_pred CCCEEEEEeCCCcEEEEECCCCcEEEE
Q 004998 668 IKSQIASSNFEGVVQVGQVLHLIYFSA 694 (720)
Q Consensus 668 ~~~~laS~s~D~~v~lWDv~tg~~~~~ 694 (720)
. .+++|+|.|+++|||||.+++++++
T Consensus 247 s-~~~~T~SaDkt~KIWdVs~~slv~t 272 (603)
T KOG0318|consen 247 S-TQFLTVSADKTIKIWDVSTNSLVST 272 (603)
T ss_pred C-ceEEEecCCceEEEEEeeccceEEE
Confidence 5 6899999999999999999998886
No 431
>KOG0266 consensus WD40 repeat-containing protein [General function prediction only]
Probab=99.48 E-value=2.9e-13 Score=152.62 Aligned_cols=127 Identities=13% Similarity=0.179 Sum_probs=105.9
Q ss_pred hhhhhccccceEEeeeecc----CCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCC
Q 004998 582 GLCKYLSFSKLRVKADLNQ----GDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASR 656 (720)
Q Consensus 582 ~l~~~~~~~~~~~~~~l~~----~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~ 656 (720)
.|...+...++|+++.... ..+.+|.+.|+||+|+|+|+++++||.|++|||||+.++ .++..+ .|.
T Consensus 217 ~l~s~s~D~tiriwd~~~~~~~~~~l~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~~--------~~~~~l~~hs 288 (456)
T KOG0266|consen 217 YLLSGSDDKTLRIWDLKDDGRNLKTLKGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRTG--------ECVRKLKGHS 288 (456)
T ss_pred EEEEecCCceEEEeeccCCCeEEEEecCCCCceEEEEecCCCCEEEEecCCCcEEEEeccCC--------eEEEeeeccC
Confidence 4666666777777776222 356789999999999999999999999999999999875 244444 457
Q ss_pred CCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCc--EEEE---------EEEEeecCCceEEEecCcc-ceEE
Q 004998 657 SKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLI--YFSA---------LYCIVLNKLLIIFRYGMFQ-EVKY 717 (720)
Q Consensus 657 ~~i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~--~~~~---------v~~v~~~~~~~~~~~~~~~-~~~~ 717 (720)
+.|++++|+++ +++|+++|+|++|+|||+.+|+ ++.+ ++++.|+|.+.++..+..| .+++
T Consensus 289 ~~is~~~f~~d-~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~fsp~~~~ll~~~~d~~~~~ 360 (456)
T KOG0266|consen 289 DGISGLAFSPD-GNLLVSASYDGTIRVWDLETGSKLCLKLLSGAENSAPVTSVQFSPNGKYLLSASLDRTLKL 360 (456)
T ss_pred CceEEEEECCC-CCEEEEcCCCccEEEEECCCCceeeeecccCCCCCCceeEEEECCCCcEEEEecCCCeEEE
Confidence 79999999995 5799999999999999999999 4443 6999999999999999999 6766
No 432
>KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription]
Probab=99.47 E-value=1.2e-13 Score=154.01 Aligned_cols=132 Identities=13% Similarity=0.068 Sum_probs=108.1
Q ss_pred ccchhhhhhhhccccceEEeeeecc---CCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEE
Q 004998 576 INPFLEGLCKYLSFSKLRVKADLNQ---GDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVE 652 (720)
Q Consensus 576 ~~~~~~~l~~~~~~~~~~~~~~l~~---~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~ 652 (720)
+.+-..-|..+...++.|.+.-... -.+.||..+|+.|.|+|-|-||||||.|+|.++|..... +|+..
T Consensus 459 FsPd~rfLlScSED~svRLWsl~t~s~~V~y~GH~~PVwdV~F~P~GyYFatas~D~tArLWs~d~~--------~PlRi 530 (707)
T KOG0263|consen 459 FSPDRRFLLSCSEDSSVRLWSLDTWSCLVIYKGHLAPVWDVQFAPRGYYFATASHDQTARLWSTDHN--------KPLRI 530 (707)
T ss_pred ecccccceeeccCCcceeeeecccceeEEEecCCCcceeeEEecCCceEEEecCCCceeeeeecccC--------Cchhh
Confidence 3333344555666666666655442 356799999999999999999999999999999997654 57754
Q ss_pred e-cCCCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceE
Q 004998 653 M-ASRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 653 ~-~~~~~i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
+ +|-+.|.||.|.|+ .+++|+||.|+|||+||+.+|.+++- |.+++|+|+|-++++|+=|-+.
T Consensus 531 faghlsDV~cv~FHPN-s~Y~aTGSsD~tVRlWDv~~G~~VRiF~GH~~~V~al~~Sp~Gr~LaSg~ed~~I 601 (707)
T KOG0263|consen 531 FAGHLSDVDCVSFHPN-SNYVATGSSDRTVRLWDVSTGNSVRIFTGHKGPVTALAFSPCGRYLASGDEDGLI 601 (707)
T ss_pred hcccccccceEEECCc-ccccccCCCCceEEEEEcCCCcEEEEecCCCCceEEEEEcCCCceEeecccCCcE
Confidence 4 55888999999995 67999999999999999999999885 8999999999999999877543
No 433
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.46 E-value=2.8e-14 Score=164.34 Aligned_cols=213 Identities=13% Similarity=0.156 Sum_probs=153.9
Q ss_pred eeeeehhhhcccCC-CCCceecccceeecCCCCCcEEEEEec-CCCCHHHHH-hCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 004998 62 LRKHSDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWL-DKPKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 62 ~r~~~e~~~Ls~l~-HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L-~~~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
.+.-.|..+-..+. |+|++++++ ........++.++| .|+++.+.+ .......+...+..++.|+..+|.|+|
T Consensus 65 ~~i~~e~~~~~~~s~h~n~~~~~~----~~~~~~~~~~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H 140 (601)
T KOG0590|consen 65 EHIDTETDIQKKLSKHSNTVHMIE----PSSSPRSYLLSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLH 140 (601)
T ss_pred hhcCccccccccccccccccccCC----ccCCCcccccccCcccccccccccccCCccCCCCcchhhhhhhhccCccccC
Confidence 34334544555555 999999999 33334467999999 999999988 444435788899999999999999999
Q ss_pred -HcCceeccCCCCcEEEccCC-ceEEeccCcccCCCC-CCcccccccccccccCCCCCCchhhHhhhhcccccccccccC
Q 004998 139 -SQGIVVHNVRPSCFVMSSFN-HVSFIESASCSDSGS-DSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTA 215 (720)
Q Consensus 139 -s~gIvHrDLKP~NILl~~~~-~vkliDfg~a~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~ 215 (720)
..++.||||||+|.+++.++ .+++.|||++..+.. ...+
T Consensus 141 ~~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~~~g~~-------------------------------------- 182 (601)
T KOG0590|consen 141 PENGVTHRDIKPSNSLLDESGSALKIADFGLATAYRNKNGAE-------------------------------------- 182 (601)
T ss_pred cccccccCCCCCccchhccCCCcccCCCchhhccccccCCcc--------------------------------------
Confidence 99999999999999999988 888888877744322 1000
Q ss_pred CCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCcccccccc-CCcccCCccccCCC-CCcccc
Q 004998 216 PTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLME-TNWYASPEELAGAP-VSCASD 293 (720)
Q Consensus 216 ~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~G-T~~Y~APE~l~~~~-~s~~sD 293 (720)
. .....+| ++.|+|||...+.. ..+..|
T Consensus 183 -------~-------------------------------------------~~~~~~g~s~~y~a~E~~~~~~~~~~~~d 212 (601)
T KOG0590|consen 183 -------R-------------------------------------------SLKDRCGSSPPYGAPEHLSGKAYRGPSVD 212 (601)
T ss_pred -------e-------------------------------------------eeecccCCCCCCCCcccccchhhcCCCcc
Confidence 0 0112467 99999999998854 688999
Q ss_pred chhhhhhhhhccc---cCCCCchHHHH-HHHhhcC-C-CCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCC
Q 004998 294 IYRLGVLLFELFC---PFSTGEEKTRT-MSSLRHR-V-LPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 366 (720)
Q Consensus 294 IwSLGvll~eLlt---pf~~~~~~~~~-~~~l~~~-~-~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~ 366 (720)
+||+|+++.-+++ |+......... ....... . ....+........+++.++|..+|..|.+.+++-.+||+..
T Consensus 213 ~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d~~~~~ 291 (601)
T KOG0590|consen 213 VWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNKGRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKLDNWLSS 291 (601)
T ss_pred cccccccccccccCCCCccccccccccceeecccccccccCccccCChhhhhcccccccCCchhccccccccccccccc
Confidence 9999999999998 43322111111 1111111 1 11222233345569999999999999999999999999998
No 434
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.45 E-value=1.6e-14 Score=150.43 Aligned_cols=157 Identities=20% Similarity=0.320 Sum_probs=97.4
Q ss_pred EEEEEecCCCCHHHHHh---CCCC---CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCccc
Q 004998 96 FVHAIEWGDVSLRQWLD---KPKR---SVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCS 169 (720)
Q Consensus 96 ~~lv~E~~ggsL~~~L~---~~~~---~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~ 169 (720)
.+++|+-..++|.+++. .... .+.....+.+..|++..+++||+.||||+||||+||+++.+|.+.|.||+...
T Consensus 114 ~~~l~P~~~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi~~~nfll~~~G~v~Lg~F~~~~ 193 (288)
T PF14531_consen 114 RFLLMPRAQGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGDIKPENFLLDQDGGVFLGDFSSLV 193 (288)
T ss_dssp EEEEEE--SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEE-TTS-EEE--GGGEE
T ss_pred hhhccchhhhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEecccceeeEEEcCCCCEEEcChHHHe
Confidence 47788888889988862 1111 13333445666999999999999999999999999999999999998776553
Q ss_pred CCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccc
Q 004998 170 DSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILD 249 (720)
Q Consensus 170 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d 249 (720)
..|....
T Consensus 194 r~g~~~~------------------------------------------------------------------------- 200 (288)
T PF14531_consen 194 RAGTRYR------------------------------------------------------------------------- 200 (288)
T ss_dssp ETTEEEE-------------------------------------------------------------------------
T ss_pred ecCceee-------------------------------------------------------------------------
Confidence 2211100
Q ss_pred cccchhhhhcccCCCCccccccccCCcccCCccccCC--------CCCccccchhhhhhhhhccc---cCCCCchHHHHH
Q 004998 250 NRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA--------PVSCASDIYRLGVLLFELFC---PFSTGEEKTRTM 318 (720)
Q Consensus 250 ~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~--------~~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~ 318 (720)
....+..|.+||..... .++.+.|.|+||+++|.|+| ||..........
T Consensus 201 --------------------~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~~~~~~~~~~ 260 (288)
T PF14531_consen 201 --------------------CSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLPFGLSSPEADPE 260 (288)
T ss_dssp --------------------GGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-STCCCGGGSTSG
T ss_pred --------------------ccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCCCCCCCcccccc
Confidence 01224668899877432 37899999999999999999 776543221100
Q ss_pred HHhhcCCCCccccccCchH-HHHHHHcCCCCCCCC
Q 004998 319 SSLRHRVLPPQLLLKFPKE-ASFCLWLLHPEPSGR 352 (720)
Q Consensus 319 ~~l~~~~~p~~~~~~~p~~-~~li~~~L~~dP~~R 352 (720)
..+.. .. ..|+. ..||..||+++|.+|
T Consensus 261 ~~f~~------C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 261 WDFSR------CR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp GGGTT------SS----HHHHHHHHHHT-SSGGGS
T ss_pred ccchh------cC-CcCHHHHHHHHHHccCCcccC
Confidence 01111 11 33443 489999999999988
No 435
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.45 E-value=2.2e-13 Score=139.40 Aligned_cols=196 Identities=15% Similarity=0.127 Sum_probs=139.0
Q ss_pred cCCcccccccccC----CCCCCccccccccccCCCCccceeee-ehhhhcccCCCCCceecccceeecCCCCCcEEEEEe
Q 004998 27 DSSRALNISGVSD----RNPRLLRGERFGVRGDDSNDFELRKH-SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIE 101 (720)
Q Consensus 27 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~r~~-~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E 101 (720)
.-++.+|.+.|+. .|.-.+.-..|.|....+..-.+|.| |--.+|. .-++|..+|. .+..+-+-.+|||
T Consensus 31 rVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~APQLrdEYr~YKlL~--g~~GIP~vYY----FGqeG~~NiLVid 104 (449)
T KOG1165|consen 31 RVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSEAPQLRDEYRTYKLLG--GTEGIPQVYY----FGQEGKYNILVID 104 (449)
T ss_pred eeccccccCcceeeecccccccCceEEEEeccccCCcchHHHHHHHHHHHc--CCCCCCceee----eccccchhhhhhh
Confidence 3345555555554 23222222334444444444455555 4444665 4688888776 3333345589999
Q ss_pred cCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEccC-----CceEEeccCcccCCCCCCc
Q 004998 102 WGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSF-----NHVSFIESASCSDSGSDSH 176 (720)
Q Consensus 102 ~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~-----~~vkliDfg~a~~~g~~~~ 176 (720)
+.|.+|.|++.--++.++...+..++.|++.-++|+|++.+|.|||||+|+||... +.|.++|||+++.+-.+..
T Consensus 105 LLGPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~T 184 (449)
T KOG1165|consen 105 LLGPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPKT 184 (449)
T ss_pred hhCcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccchhhhcCccc
Confidence 99999999987778889999999999999999999999999999999999999733 4588888888876544422
Q ss_pred ccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhh
Q 004998 177 EEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQ 256 (720)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~ 256 (720)
.. +++..|.
T Consensus 185 kq--------------------------------------------------------HIPYrE~--------------- 193 (449)
T KOG1165|consen 185 KQ--------------------------------------------------------HIPYREH--------------- 193 (449)
T ss_pred cc--------------------------------------------------------cCccccc---------------
Confidence 11 1111111
Q ss_pred hhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhccc---cCCCC
Q 004998 257 VEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTG 311 (720)
Q Consensus 257 ~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt---pf~~~ 311 (720)
....||..||+---..|...+..-|+=|||-++++.|- ||.+.
T Consensus 194 ------------KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGL 239 (449)
T KOG1165|consen 194 ------------KSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGL 239 (449)
T ss_pred ------------cccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccc
Confidence 12579999999998889989999999999988888776 77653
No 436
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.43 E-value=1.3e-13 Score=136.90 Aligned_cols=101 Identities=10% Similarity=0.069 Sum_probs=78.2
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHH-HHcCce
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAA-HSQGIV 143 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yL-Hs~gIv 143 (720)
.|..+|.++.|++|...+. .. .. ..++|||| .|++|...+... ..++..++..++.||+.+|.|+ |+.||+
T Consensus 68 ~E~~~l~~l~~~~v~~p~~-~~-~~----~~~iVmE~i~g~~l~~~~~~~-~~~~~~~~~~i~~qi~~~L~~l~H~~gii 140 (190)
T cd05147 68 KEMRNLKRLVTAGIPCPEP-IL-LK----SHVLVMEFIGDDGWAAPRLKD-APLSESKARELYLQVIQIMRILYQDCRLV 140 (190)
T ss_pred HHHHHHHHHHHCCCCCCcE-EE-ec----CCEEEEEEeCCCCCcchhhhc-CCCCHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 4778888888888744333 21 11 12799999 766665543232 3589999999999999999999 799999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCC
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSD 174 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~ 174 (720)
||||||+|||++ ++.++|+|||++...+.+
T Consensus 141 HrDlkP~NIli~-~~~v~LiDFG~a~~~~~~ 170 (190)
T cd05147 141 HADLSEYNLLYH-DGKLYIIDVSQSVEHDHP 170 (190)
T ss_pred cCCCCHHHEEEE-CCcEEEEEccccccCCCc
Confidence 999999999998 588999999999654433
No 437
>KOG0283 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.43 E-value=3.4e-13 Score=151.68 Aligned_cols=112 Identities=16% Similarity=0.310 Sum_probs=91.0
Q ss_pred CCCC-CCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCc----------------------------ccc----cc----
Q 004998 601 GDLL-NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDA----------------------------IIN----EN---- 643 (720)
Q Consensus 601 ~~~~-~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~----------------------------~~~----~~---- 643 (720)
.++. .|.+.|.++.|++||+||||||.|+.||||.+.. ... ..
T Consensus 260 Qe~~~ah~gaIw~mKFS~DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~~ 339 (712)
T KOG0283|consen 260 QEISNAHKGAIWAMKFSHDGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSSS 339 (712)
T ss_pred eccccccCCcEEEEEeCCCCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCcccccccccccccccc
Confidence 4556 7899999999999999999999999999998643 000 00
Q ss_pred ------ccc----------ccceEE-ecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE------EEEEee
Q 004998 644 ------RDI----------HYPVVE-MASRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA------LYCIVL 700 (720)
Q Consensus 644 ------~~~----------~~~~~~-~~~~~~i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~------v~~v~~ 700 (720)
..+ ..|+.+ ++|.+.|..|+||.+ ++|.|+|.|+|||||++.+.+|+.. |+||+|
T Consensus 340 ~~~~~s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSKn--~fLLSSSMDKTVRLWh~~~~~CL~~F~HndfVTcVaF 417 (712)
T KOG0283|consen 340 RKGSQSPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSKN--NFLLSSSMDKTVRLWHPGRKECLKVFSHNDFVTCVAF 417 (712)
T ss_pred ccccCCccccCCCccccccccchhhhhccchhheecccccC--CeeEeccccccEEeecCCCcceeeEEecCCeeEEEEe
Confidence 001 124444 456888999999984 6999999999999999999999998 999999
Q ss_pred cCC-ceEEEecCccc
Q 004998 701 NKL-LIIFRYGMFQE 714 (720)
Q Consensus 701 ~~~-~~~~~~~~~~~ 714 (720)
||. -.++.+||+|-
T Consensus 418 nPvDDryFiSGSLD~ 432 (712)
T KOG0283|consen 418 NPVDDRYFISGSLDG 432 (712)
T ss_pred cccCCCcEeeccccc
Confidence 995 68999999984
No 438
>KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms]
Probab=99.43 E-value=9.5e-13 Score=131.21 Aligned_cols=106 Identities=12% Similarity=0.201 Sum_probs=89.8
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceE-EecCCCCEEEEEEecCCCCEEEEEeCCCcE
Q 004998 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVV-EMASRSKLSSICWNSYIKSQIASSNFEGVV 681 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~-~~~~~~~i~~v~~~~~~~~~laS~s~D~~v 681 (720)
|.||++.|+.|+.++||.++.|||.|+++|+||+.++ .+.. ...|...|.+|+|||+. .+|+|||.|+||
T Consensus 59 ~~GHsH~v~dv~~s~dg~~alS~swD~~lrlWDl~~g--------~~t~~f~GH~~dVlsva~s~dn-~qivSGSrDkTi 129 (315)
T KOG0279|consen 59 LTGHSHFVSDVVLSSDGNFALSASWDGTLRLWDLATG--------ESTRRFVGHTKDVLSVAFSTDN-RQIVSGSRDKTI 129 (315)
T ss_pred eeccceEecceEEccCCceEEeccccceEEEEEecCC--------cEEEEEEecCCceEEEEecCCC-ceeecCCCccee
Confidence 4578999999999999999999999999999999886 2343 44567789999999975 589999999999
Q ss_pred EEEECCCCcEEEE--------EEEEeecCC--ceEEEecCccceEE
Q 004998 682 QVGQVLHLIYFSA--------LYCIVLNKL--LIIFRYGMFQEVKY 717 (720)
Q Consensus 682 ~lWDv~tg~~~~~--------v~~v~~~~~--~~~~~~~~~~~~~~ 717 (720)
++||+-.+....- |.||.|+|. ..+|++++-|+.-.
T Consensus 130 klwnt~g~ck~t~~~~~~~~WVscvrfsP~~~~p~Ivs~s~DktvK 175 (315)
T KOG0279|consen 130 KLWNTLGVCKYTIHEDSHREWVSCVRFSPNESNPIIVSASWDKTVK 175 (315)
T ss_pred eeeeecccEEEEEecCCCcCcEEEEEEcCCCCCcEEEEccCCceEE
Confidence 9999976543321 899999998 89999999998643
No 439
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.42 E-value=3.1e-13 Score=134.39 Aligned_cols=100 Identities=13% Similarity=0.096 Sum_probs=78.2
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHH-HHhCCCCCCCHHHHHHHHHHHHHHHHHHHH-cC
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQ-WLDKPKRSVDVYECLHIFRQIVEIVYAAHS-QG 141 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~-~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs-~g 141 (720)
.+|...+.++.|++|..... +.... .|+|||| .|+++.. .+.. ..++..++..++.|++.+|.++|+ +|
T Consensus 67 ~~E~~~l~~l~~~~i~~p~~-~~~~~-----~~lVmE~~~g~~~~~~~l~~--~~~~~~~~~~i~~~l~~~l~~lH~~~g 138 (190)
T cd05145 67 EKEFRNLKRLYEAGVPVPEP-ILLKK-----NVLVMEFIGDDGSPAPRLKD--VPLEEEEAEELYEQVVEQMRRLYQEAG 138 (190)
T ss_pred HHHHHHHHHHHhCCCCCceE-EEecC-----CEEEEEEecCCCchhhhhhh--ccCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 36777888899998754433 11111 3799999 6665443 3432 347889999999999999999999 99
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCC
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGS 173 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~ 173 (720)
|+||||||+|||++ ++.++|+|||++.....
T Consensus 139 ivHrDlkP~NIll~-~~~~~liDFG~a~~~~~ 169 (190)
T cd05145 139 LVHGDLSEYNILYH-DGKPYIIDVSQAVELDH 169 (190)
T ss_pred EecCCCChhhEEEE-CCCEEEEEcccceecCC
Confidence 99999999999998 89999999999976543
No 440
>KOG0316 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.41 E-value=9.5e-13 Score=128.18 Aligned_cols=104 Identities=15% Similarity=0.138 Sum_probs=90.1
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecC-CCCEEEEEEecCCCCEEEEEeCCCcE
Q 004998 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS-RSKLSSICWNSYIKSQIASSNFEGVV 681 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~i~~v~~~~~~~~~laS~s~D~~v 681 (720)
|..+.+.|+.+.|+.||+|..|||.|++||+|+...+ ..+.+..+ ...|..++-+.+ ...+|||+-|+.|
T Consensus 13 l~~~qgaV~avryN~dGnY~ltcGsdrtvrLWNp~rg--------~liktYsghG~EVlD~~~s~D-nskf~s~GgDk~v 83 (307)
T KOG0316|consen 13 LDCAQGAVRAVRYNVDGNYCLTCGSDRTVRLWNPLRG--------ALIKTYSGHGHEVLDAALSSD-NSKFASCGGDKAV 83 (307)
T ss_pred ecccccceEEEEEccCCCEEEEcCCCceEEeeccccc--------ceeeeecCCCceeeecccccc-ccccccCCCCceE
Confidence 4456899999999999999999999999999997665 24555544 567999988875 4589999999999
Q ss_pred EEEECCCCcEEEE-------EEEEeecCCceEEEecCccce
Q 004998 682 QVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 682 ~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
.+|||.||+.++. |+.|.||+..+.+.+|+||--
T Consensus 84 ~vwDV~TGkv~Rr~rgH~aqVNtV~fNeesSVv~SgsfD~s 124 (307)
T KOG0316|consen 84 QVWDVNTGKVDRRFRGHLAQVNTVRFNEESSVVASGSFDSS 124 (307)
T ss_pred EEEEcccCeeeeecccccceeeEEEecCcceEEEeccccce
Confidence 9999999999886 999999999999999999964
No 441
>KOG0284 consensus Polyadenylation factor I complex, subunit PFS2 [RNA processing and modification]
Probab=99.41 E-value=3.4e-13 Score=140.21 Aligned_cols=128 Identities=16% Similarity=0.168 Sum_probs=101.4
Q ss_pred ccchhhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecC
Q 004998 576 INPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS 655 (720)
Q Consensus 576 ~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 655 (720)
+++-..+..|||.-+ +.++.... .+|+..|.+++|+|....|+|||.|++|+|||+....++. +.-+|
T Consensus 154 iSgD~gG~iKyWqpn-mnnVk~~~----ahh~eaIRdlafSpnDskF~t~SdDg~ikiWdf~~~kee~-------vL~GH 221 (464)
T KOG0284|consen 154 ISGDKGGMIKYWQPN-MNNVKIIQ----AHHAEAIRDLAFSPNDSKFLTCSDDGTIKIWDFRMPKEER-------VLRGH 221 (464)
T ss_pred EEcCCCceEEecccc-hhhhHHhh----HhhhhhhheeccCCCCceeEEecCCCeEEEEeccCCchhh-------eeccC
Confidence 334445577888764 33333333 1357899999999999999999999999999987653221 11234
Q ss_pred CCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceE
Q 004998 656 RSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 656 ~~~i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
.-.|.||.|.|. +..|||+|.|..||+||.++|+|+.+ |..+.|++.++.+.++|=|..-
T Consensus 222 gwdVksvdWHP~-kgLiasgskDnlVKlWDprSg~cl~tlh~HKntVl~~~f~~n~N~Llt~skD~~~ 288 (464)
T KOG0284|consen 222 GWDVKSVDWHPT-KGLIASGSKDNLVKLWDPRSGSCLATLHGHKNTVLAVKFNPNGNWLLTGSKDQSC 288 (464)
T ss_pred CCCcceeccCCc-cceeEEccCCceeEeecCCCcchhhhhhhccceEEEEEEcCCCCeeEEccCCceE
Confidence 567999999995 67999999999999999999999986 9999999999999999988764
No 442
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.40 E-value=5.6e-13 Score=132.29 Aligned_cols=92 Identities=12% Similarity=0.126 Sum_probs=76.2
Q ss_pred eeeehhhhcccCC-CCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004998 63 RKHSDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~Ls~l~-HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+..+|..+|.++. |++|+++++ + . ..|++||| .|.+|.+.+.. ....++.|++.+|.++|++
T Consensus 47 l~~rE~~iL~~L~~~~~vP~ll~-~---~----~~~lvmeyI~G~~L~~~~~~--------~~~~~~~qi~~~L~~lH~~ 110 (218)
T PRK12274 47 LARREALALRQLDGLPRTPRLLH-W---D----GRHLDRSYLAGAAMYQRPPR--------GDLAYFRAARRLLQQLHRC 110 (218)
T ss_pred HHHHHHHHHHhcCCCCCCCEEEE-E---c----CEEEEEeeecCccHHhhhhh--------hhHHHHHHHHHHHHHHHHC
Confidence 4568899999995 478989888 2 1 35899999 99999764411 1235789999999999999
Q ss_pred CceeccC-CCCcEEEccCCceEEeccCcccC
Q 004998 141 GIVVHNV-RPSCFVMSSFNHVSFIESASCSD 170 (720)
Q Consensus 141 gIvHrDL-KP~NILl~~~~~vkliDfg~a~~ 170 (720)
||+|||| ||+|||++.++.++|+|||++..
T Consensus 111 GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~ 141 (218)
T PRK12274 111 GVAHNDLAKEANWLVQEDGSPAVIDFQLAVR 141 (218)
T ss_pred cCccCCCCCcceEEEcCCCCEEEEECCCcee
Confidence 9999999 79999999999999999999964
No 443
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.40 E-value=8.3e-13 Score=129.87 Aligned_cols=135 Identities=19% Similarity=0.213 Sum_probs=104.5
Q ss_pred cEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEc---cCCceEEeccCcccCC
Q 004998 95 PFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMS---SFNHVSFIESASCSDS 171 (720)
Q Consensus 95 ~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~---~~~~vkliDfg~a~~~ 171 (720)
+-.+||++.|.+|.+++.--.+.++...++.++-|++.-|+|+|.+++|||||||+|+|+. ..+++.+||||+++.+
T Consensus 85 ynvlVMdLLGPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky 164 (341)
T KOG1163|consen 85 YNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKY 164 (341)
T ss_pred cceeeeeccCccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEeccchhhh
Confidence 4589999999999998865566699999999999999999999999999999999999996 4567899999888554
Q ss_pred CCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccc
Q 004998 172 GSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNR 251 (720)
Q Consensus 172 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g 251 (720)
-..... .+++..++
T Consensus 165 ~d~~t~--------------------------------------------------------~HIpyre~---------- 178 (341)
T KOG1163|consen 165 RDIRTR--------------------------------------------------------QHIPYRED---------- 178 (341)
T ss_pred cccccc--------------------------------------------------------ccCccccC----------
Confidence 221110 11111111
Q ss_pred cchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhccc---cCCCCc
Q 004998 252 VNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGE 312 (720)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt---pf~~~~ 312 (720)
....||..|.+--...+...+..-|+=|+|-+|.++.- ||.+..
T Consensus 179 -----------------r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglk 225 (341)
T KOG1163|consen 179 -----------------RNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLK 225 (341)
T ss_pred -----------------CccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccc
Confidence 22679999999888888778899999999966655544 777653
No 444
>KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.40 E-value=1.6e-12 Score=143.94 Aligned_cols=84 Identities=20% Similarity=0.303 Sum_probs=72.9
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEE
Q 004998 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQ 682 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~v~ 682 (720)
..+|...++|++++|||+++|||+.|++|||||..++. |-++.-.|++.|+.|+|.. .++.|.|+|-|||||
T Consensus 346 QQgH~~~i~~l~YSpDgq~iaTG~eDgKVKvWn~~Sgf-------C~vTFteHts~Vt~v~f~~-~g~~llssSLDGtVR 417 (893)
T KOG0291|consen 346 QQGHSDRITSLAYSPDGQLIATGAEDGKVKVWNTQSGF-------CFVTFTEHTSGVTAVQFTA-RGNVLLSSSLDGTVR 417 (893)
T ss_pred ccccccceeeEEECCCCcEEEeccCCCcEEEEeccCce-------EEEEeccCCCceEEEEEEe-cCCEEEEeecCCeEE
Confidence 45789999999999999999999999999999988763 3334446799999999998 467999999999999
Q ss_pred EEECCCCcEEEE
Q 004998 683 VGQVLHLIYFSA 694 (720)
Q Consensus 683 lWDv~tg~~~~~ 694 (720)
.||+...++.+|
T Consensus 418 AwDlkRYrNfRT 429 (893)
T KOG0291|consen 418 AWDLKRYRNFRT 429 (893)
T ss_pred eeeecccceeee
Confidence 999988887775
No 445
>KOG0285 consensus Pleiotropic regulator 1 [RNA processing and modification]
Probab=99.38 E-value=1.6e-12 Score=133.24 Aligned_cols=108 Identities=14% Similarity=0.145 Sum_probs=93.9
Q ss_pred CCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCEEEEEEecCCCCEEEEEeCCC
Q 004998 601 GDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFEG 679 (720)
Q Consensus 601 ~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~v~~~~~~~~~laS~s~D~ 679 (720)
..+.+|.+||.||+++|.+++|||||.|++|+|||++++. ....++ |-..|..|++|+-+ .+|.|++.|+
T Consensus 145 rVi~gHlgWVr~vavdP~n~wf~tgs~DrtikIwDlatg~--------LkltltGhi~~vr~vavS~rH-pYlFs~gedk 215 (460)
T KOG0285|consen 145 RVISGHLGWVRSVAVDPGNEWFATGSADRTIKIWDLATGQ--------LKLTLTGHIETVRGVAVSKRH-PYLFSAGEDK 215 (460)
T ss_pred hhhhhccceEEEEeeCCCceeEEecCCCceeEEEEcccCe--------EEEeecchhheeeeeeecccC-ceEEEecCCC
Confidence 3467889999999999999999999999999999999872 223343 47789999999965 5999999999
Q ss_pred cEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceEE
Q 004998 680 VVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 680 ~v~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
.||-||+...+.|+. |+|++..|..-.+.+|+=|-+..
T Consensus 216 ~VKCwDLe~nkvIR~YhGHlS~V~~L~lhPTldvl~t~grDst~R 260 (460)
T KOG0285|consen 216 QVKCWDLEYNKVIRHYHGHLSGVYCLDLHPTLDVLVTGGRDSTIR 260 (460)
T ss_pred eeEEEechhhhhHHHhccccceeEEEeccccceeEEecCCcceEE
Confidence 999999999998875 99999999999999999887643
No 446
>KOG0313 consensus Microtubule binding protein YTM1 (contains WD40 repeats) [Cytoskeleton]
Probab=99.38 E-value=1.4e-12 Score=134.65 Aligned_cols=127 Identities=13% Similarity=0.137 Sum_probs=98.5
Q ss_pred hhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceE-EecCCCC
Q 004998 580 LEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVV-EMASRSK 658 (720)
Q Consensus 580 ~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~-~~~~~~~ 658 (720)
.+...+-|...+.+.+.++.. .-..+||+.+|...+||+||.|+-||+||.++.. ..-+.. ..+|++.
T Consensus 279 wDHTIk~WDletg~~~~~~~~------~ksl~~i~~~~~~~Ll~~gssdr~irl~DPR~~~-----gs~v~~s~~gH~nw 347 (423)
T KOG0313|consen 279 WDHTIKVWDLETGGLKSTLTT------NKSLNCISYSPLSKLLASGSSDRHIRLWDPRTGD-----GSVVSQSLIGHKNW 347 (423)
T ss_pred ccceEEEEEeecccceeeeec------CcceeEeecccccceeeecCCCCceeecCCCCCC-----CceeEEeeecchhh
Confidence 333444444444444444443 4678999999999999999999999999998872 222333 4567889
Q ss_pred EEEEEEecCCCCEEEEEeCCCcEEEEECCCCc-EEEE-------EEEEeecCCceEEEecCccceEEc
Q 004998 659 LSSICWNSYIKSQIASSNFEGVVQVGQVLHLI-YFSA-------LYCIVLNKLLIIFRYGMFQEVKYL 718 (720)
Q Consensus 659 i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~-~~~~-------v~~v~~~~~~~~~~~~~~~~~~~~ 718 (720)
|++|.|+|-+..+|+|+|||++|||||+++-+ .+.+ |+|+.|++. .+|++|..|.-.+.
T Consensus 348 Vssvkwsp~~~~~~~S~S~D~t~klWDvRS~k~plydI~~h~DKvl~vdW~~~-~~IvSGGaD~~l~i 414 (423)
T KOG0313|consen 348 VSSVKWSPTNEFQLVSGSYDNTVKLWDVRSTKAPLYDIAGHNDKVLSVDWNEG-GLIVSGGADNKLRI 414 (423)
T ss_pred hhheecCCCCceEEEEEecCCeEEEEEeccCCCcceeeccCCceEEEEeccCC-ceEEeccCcceEEE
Confidence 99999999988999999999999999999887 6665 999999975 57788888875543
No 447
>KOG0295 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.38 E-value=4.5e-12 Score=130.37 Aligned_cols=122 Identities=12% Similarity=0.167 Sum_probs=100.4
Q ss_pred hccccceEEeeeecc---CCCCCCCCCeEEEEECCC---------------CCEEEEeeCCCcEEEeeCCcccccccccc
Q 004998 586 YLSFSKLRVKADLNQ---GDLLNSSNLVCSLSFDRD---------------GELFAAAGVNKKIKVFECDAIINENRDIH 647 (720)
Q Consensus 586 ~~~~~~~~~~~~l~~---~~~~~~~~~V~sv~f~~d---------------g~~lat~~~d~~i~iwd~~~~~~~~~~~~ 647 (720)
.....+++++-.-.. ..|..|...|-||+|-|. |+++++||.||+||+||+.++.
T Consensus 253 ~s~dqtl~vW~~~t~~~k~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~------- 325 (406)
T KOG0295|consen 253 CSNDQTLRVWVVATKQCKAELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGM------- 325 (406)
T ss_pred cCCCceEEEEEeccchhhhhhhccccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCCe-------
Confidence 333455666544332 457788999999999653 2589999999999999998883
Q ss_pred cceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccce
Q 004998 648 YPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 648 ~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
|.....+|.+.|+.++|+| ++.+|+|+..|+|++|||+.+++|+.+ |.|++|....-+.++|+.|+-
T Consensus 326 cL~tL~ghdnwVr~~af~p-~Gkyi~ScaDDktlrvwdl~~~~cmk~~~ah~hfvt~lDfh~~~p~VvTGsVdqt 399 (406)
T KOG0295|consen 326 CLFTLVGHDNWVRGVAFSP-GGKYILSCADDKTLRVWDLKNLQCMKTLEAHEHFVTSLDFHKTAPYVVTGSVDQT 399 (406)
T ss_pred EEEEEecccceeeeeEEcC-CCeEEEEEecCCcEEEEEeccceeeeccCCCcceeEEEecCCCCceEEeccccce
Confidence 4455567789999999999 566999999999999999999999987 899999999999999999863
No 448
>KOG0276 consensus Vesicle coat complex COPI, beta' subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.35 E-value=1.8e-12 Score=140.87 Aligned_cols=127 Identities=13% Similarity=0.126 Sum_probs=102.7
Q ss_pred ccchhhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECC-CCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-
Q 004998 576 INPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM- 653 (720)
Q Consensus 576 ~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~-dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~- 653 (720)
|.+-.+-+.|+|.|.+- ++.- -.+.||++.|.+|+|+| |...|||||.|+|||||.+... .|.-++
T Consensus 113 LtsSDDm~iKlW~we~~--wa~~--qtfeGH~HyVMqv~fnPkD~ntFaS~sLDrTVKVWslgs~--------~~nfTl~ 180 (794)
T KOG0276|consen 113 LTSSDDMTIKLWDWENE--WACE--QTFEGHEHYVMQVAFNPKDPNTFASASLDRTVKVWSLGSP--------HPNFTLE 180 (794)
T ss_pred EecCCccEEEEeeccCc--eeee--eEEcCcceEEEEEEecCCCccceeeeeccccEEEEEcCCC--------CCceeee
Confidence 44445567888888532 2222 24789999999999998 5578999999999999998655 244344
Q ss_pred cCCCCEEEEEEec-CCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccc
Q 004998 654 ASRSKLSSICWNS-YIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 654 ~~~~~i~~v~~~~-~~~~~laS~s~D~~v~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~ 714 (720)
.|...|+||++-+ .++.+|+||+.|.+|||||.+|.+|++| |.++.|+|...+|.+||=|-
T Consensus 181 gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~CV~TLeGHt~Nvs~v~fhp~lpiiisgsEDG 249 (794)
T KOG0276|consen 181 GHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKSCVQTLEGHTNNVSFVFFHPELPIIISGSEDG 249 (794)
T ss_pred ccccCcceEEeccCCCcceEEecCCCceEEEeecchHHHHHHhhcccccceEEEecCCCcEEEEecCCc
Confidence 4577899999966 3467999999999999999999999997 89999999999999999774
No 449
>KOG0265 consensus U5 snRNP-specific protein-like factor and related proteins [RNA processing and modification]
Probab=99.34 E-value=8e-12 Score=125.79 Aligned_cols=86 Identities=14% Similarity=0.103 Sum_probs=68.1
Q ss_pred CCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCCC
Q 004998 601 GDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEG 679 (720)
Q Consensus 601 ~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~v~~~~~~~~~laS~s~D~ 679 (720)
.++.||.+.|+.+.|+|||.+|||||.|+.|-+|+.-.-.+. ...+ .|.+.|..|.|+++ +++|.|++.|+
T Consensus 41 m~l~gh~geI~~~~F~P~gs~~aSgG~Dr~I~LWnv~gdceN-------~~~lkgHsgAVM~l~~~~d-~s~i~S~gtDk 112 (338)
T KOG0265|consen 41 MLLPGHKGEIYTIKFHPDGSCFASGGSDRAIVLWNVYGDCEN-------FWVLKGHSGAVMELHGMRD-GSHILSCGTDK 112 (338)
T ss_pred hhcCCCcceEEEEEECCCCCeEeecCCcceEEEEeccccccc-------eeeeccccceeEeeeeccC-CCEEEEecCCc
Confidence 356789999999999999999999999999999984321111 1111 45778999999985 56888999999
Q ss_pred cEEEEECCCCcEEEE
Q 004998 680 VVQVGQVLHLIYFSA 694 (720)
Q Consensus 680 ~v~lWDv~tg~~~~~ 694 (720)
+|+.||++||+++..
T Consensus 113 ~v~~wD~~tG~~~rk 127 (338)
T KOG0265|consen 113 TVRGWDAETGKRIRK 127 (338)
T ss_pred eEEEEecccceeeeh
Confidence 999999988888763
No 450
>KOG0645 consensus WD40 repeat protein [General function prediction only]
Probab=99.32 E-value=2.2e-11 Score=121.08 Aligned_cols=116 Identities=11% Similarity=0.190 Sum_probs=90.1
Q ss_pred cceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCC
Q 004998 590 SKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIK 669 (720)
Q Consensus 590 ~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~ 669 (720)
..|+.+++| .||.+.|.||+|+++|.||||+|.||.|=||+.... .+..|.-+.-.|...|.-|.|.| ..
T Consensus 93 ~efecv~~l-----EGHEnEVK~Vaws~sG~~LATCSRDKSVWiWe~ded----dEfec~aVL~~HtqDVK~V~WHP-t~ 162 (312)
T KOG0645|consen 93 GEFECVATL-----EGHENEVKCVAWSASGNYLATCSRDKSVWIWEIDED----DEFECIAVLQEHTQDVKHVIWHP-TE 162 (312)
T ss_pred CceeEEeee-----eccccceeEEEEcCCCCEEEEeeCCCeEEEEEecCC----CcEEEEeeeccccccccEEEEcC-Cc
Confidence 456777776 566999999999999999999999999999997632 11112223335677899999999 46
Q ss_pred CEEEEEeCCCcEEEEECCCC---cEEE-------EEEEEeecCCceEEEecCccce
Q 004998 670 SQIASSNFEGVVQVGQVLHL---IYFS-------ALYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 670 ~~laS~s~D~~v~lWDv~tg---~~~~-------~v~~v~~~~~~~~~~~~~~~~~ 715 (720)
.+|+|+|||.|||+|+-..+ +|++ ||||++|++.|.-.++++-|--
T Consensus 163 dlL~S~SYDnTIk~~~~~~dddW~c~~tl~g~~~TVW~~~F~~~G~rl~s~sdD~t 218 (312)
T KOG0645|consen 163 DLLFSCSYDNTIKVYRDEDDDDWECVQTLDGHENTVWSLAFDNIGSRLVSCSDDGT 218 (312)
T ss_pred ceeEEeccCCeEEEEeecCCCCeeEEEEecCccceEEEEEecCCCceEEEecCCcc
Confidence 79999999999999976622 2333 4999999999988888876643
No 451
>KOG0282 consensus mRNA splicing factor [Function unknown]
Probab=99.32 E-value=1.4e-12 Score=138.28 Aligned_cols=107 Identities=14% Similarity=0.174 Sum_probs=92.3
Q ss_pred CCCCCCCCCeEEEEECC-CCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCC
Q 004998 601 GDLLNSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEG 679 (720)
Q Consensus 601 ~~~~~~~~~V~sv~f~~-dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~ 679 (720)
..+.||+-.|+++.|-| .+.+|++||+|++|+|||+-.- .+|-...+.|+..|..++||+. +..+.|+|||+
T Consensus 208 ~~~~gH~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~~------~~~lrtf~gH~k~Vrd~~~s~~-g~~fLS~sfD~ 280 (503)
T KOG0282|consen 208 HNLSGHTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYDD------RRCLRTFKGHRKPVRDASFNNC-GTSFLSASFDR 280 (503)
T ss_pred eeccCCccccchhhhccceeeEEEecCCCceEEEEEEecC------cceehhhhcchhhhhhhhcccc-CCeeeeeecce
Confidence 45678899999999999 9999999999999999997541 2233345566778999999996 46889999999
Q ss_pred cEEEEECCCCcEEEE------EEEEeecCCc-eEEEecCccc
Q 004998 680 VVQVGQVLHLIYFSA------LYCIVLNKLL-IIFRYGMFQE 714 (720)
Q Consensus 680 ~v~lWDv~tg~~~~~------v~~v~~~~~~-~~~~~~~~~~ 714 (720)
+||+||++||+++.. ++||.|+|.. +.+..|++|.
T Consensus 281 ~lKlwDtETG~~~~~f~~~~~~~cvkf~pd~~n~fl~G~sd~ 322 (503)
T KOG0282|consen 281 FLKLWDTETGQVLSRFHLDKVPTCVKFHPDNQNIFLVGGSDK 322 (503)
T ss_pred eeeeeccccceEEEEEecCCCceeeecCCCCCcEEEEecCCC
Confidence 999999999999987 7999999999 9999999886
No 452
>KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.31 E-value=1e-11 Score=137.61 Aligned_cols=125 Identities=15% Similarity=0.188 Sum_probs=107.7
Q ss_pred hhhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCC
Q 004998 579 FLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRS 657 (720)
Q Consensus 579 ~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~ 657 (720)
-.+.+++.|+.-.++++++| .||...|.||.|+|..+++||+|.|+|||||.+.++ .++.++. |++
T Consensus 482 SqDktaKiW~le~~~l~~vL-----sGH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~f--------SClkT~eGH~~ 548 (775)
T KOG0319|consen 482 SQDKTAKIWDLEQLRLLGVL-----SGHTRGVWCVSFSKNDQLLATCSGDKTVKIWSISTF--------SCLKTFEGHTS 548 (775)
T ss_pred ccccceeeecccCceEEEEe-----eCCccceEEEEeccccceeEeccCCceEEEEEeccc--------eeeeeecCccc
Confidence 34557888888777777666 456999999999999999999999999999999887 3566665 688
Q ss_pred CEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceEE
Q 004998 658 KLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 658 ~i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
.|-.++|-.++ .+|+||+.||.||||++.|+.|+++ ||+.+-++...-+.+|.-|-+.-
T Consensus 549 aVlra~F~~~~-~qliS~~adGliKlWnikt~eC~~tlD~H~DrvWaL~~~~~~~~~~tgg~Dg~i~ 614 (775)
T KOG0319|consen 549 AVLRASFIRNG-KQLISAGADGLIKLWNIKTNECEMTLDAHNDRVWALSVSPLLDMFVTGGGDGRII 614 (775)
T ss_pred eeEeeeeeeCC-cEEEeccCCCcEEEEeccchhhhhhhhhccceeEEEeecCccceeEecCCCeEEE
Confidence 99999998765 5899999999999999999999998 99999999999999888776543
No 453
>PTZ00420 coronin; Provisional
Probab=99.31 E-value=2e-11 Score=139.04 Aligned_cols=103 Identities=11% Similarity=0.119 Sum_probs=85.7
Q ss_pred CCCCCCCeEEEEECCCCCE-EEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcE
Q 004998 603 LLNSSNLVCSLSFDRDGEL-FAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVV 681 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~-lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~v 681 (720)
+.+|...|.+|+|+|++.. |||||.|++|+|||+.+.. .+..+.+...|.+++|+|+ +++||+++.|++|
T Consensus 121 L~gH~~~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~--------~~~~i~~~~~V~Slswspd-G~lLat~s~D~~I 191 (568)
T PTZ00420 121 LKGHKKKISIIDWNPMNYYIMCSSGFDSFVNIWDIENEK--------RAFQINMPKKLSSLKWNIK-GNLLSGTCVGKHM 191 (568)
T ss_pred eecCCCcEEEEEECCCCCeEEEEEeCCCeEEEEECCCCc--------EEEEEecCCcEEEEEECCC-CCEEEEEecCCEE
Confidence 4578899999999999985 6899999999999998762 2333445678999999996 5699999999999
Q ss_pred EEEECCCCcEEEE------------EEEEeecCCceEEEecCccc
Q 004998 682 QVGQVLHLIYFSA------------LYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 682 ~lWDv~tg~~~~~------------v~~v~~~~~~~~~~~~~~~~ 714 (720)
+|||+++++.+.+ +|+..|++.+..+.++.||.
T Consensus 192 rIwD~Rsg~~i~tl~gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~ 236 (568)
T PTZ00420 192 HIIDPRKQEIASSFHIHDGGKNTKNIWIDGLGGDDNYILSTGFSK 236 (568)
T ss_pred EEEECCCCcEEEEEecccCCceeEEEEeeeEcCCCCEEEEEEcCC
Confidence 9999999988765 45567788889999998884
No 454
>KOG0285 consensus Pleiotropic regulator 1 [RNA processing and modification]
Probab=99.29 E-value=5.7e-12 Score=129.16 Aligned_cols=128 Identities=11% Similarity=0.109 Sum_probs=107.1
Q ss_pred ccchhhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-
Q 004998 576 INPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA- 654 (720)
Q Consensus 576 ~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~- 654 (720)
+.+-.+.+.++|..-.-+++.. +.||-+.|.|++.+|.-+.|+|||.|.+|||||+++.. +|..|.
T Consensus 209 Fs~gedk~VKCwDLe~nkvIR~-----YhGHlS~V~~L~lhPTldvl~t~grDst~RvWDiRtr~--------~V~~l~G 275 (460)
T KOG0285|consen 209 FSAGEDKQVKCWDLEYNKVIRH-----YHGHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRTRA--------SVHVLSG 275 (460)
T ss_pred EEecCCCeeEEEechhhhhHHH-----hccccceeEEEeccccceeEEecCCcceEEEeeecccc--------eEEEecC
Confidence 4555566778877655444433 45778999999999999999999999999999998873 565665
Q ss_pred CCCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceEE
Q 004998 655 SRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 655 ~~~~i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
|++.|..|.++|.+. +++|||.|+||++||++.|+...+ |.|++.+|..+.+++++-|-.|.
T Consensus 276 H~~~V~~V~~~~~dp-qvit~S~D~tvrlWDl~agkt~~tlt~hkksvral~lhP~e~~fASas~dnik~ 344 (460)
T KOG0285|consen 276 HTNPVASVMCQPTDP-QVITGSHDSTVRLWDLRAGKTMITLTHHKKSVRALCLHPKENLFASASPDNIKQ 344 (460)
T ss_pred CCCcceeEEeecCCC-ceEEecCCceEEEeeeccCceeEeeecccceeeEEecCCchhhhhccCCcccee
Confidence 588999999999665 799999999999999999998776 89999999999999999887763
No 455
>KOG1407 consensus WD40 repeat protein [Function unknown]
Probab=99.29 E-value=8.1e-12 Score=123.54 Aligned_cols=108 Identities=13% Similarity=0.189 Sum_probs=87.1
Q ss_pred CCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCc
Q 004998 601 GDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGV 680 (720)
Q Consensus 601 ~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~ 680 (720)
.++.+|...|.||+|+.||..||+|+.|++++||++.... .......-.|++.|-.+||+|.+.+.+|+++.|++
T Consensus 14 r~~~~~~~~v~Sv~wn~~g~~lasgs~dktv~v~n~e~~r-----~~~~~~~~gh~~svdql~w~~~~~d~~atas~dk~ 88 (313)
T KOG1407|consen 14 RELQGHVQKVHSVAWNCDGTKLASGSFDKTVSVWNLERDR-----FRKELVYRGHTDSVDQLCWDPKHPDLFATASGDKT 88 (313)
T ss_pred HHhhhhhhcceEEEEcccCceeeecccCCceEEEEecchh-----hhhhhcccCCCcchhhheeCCCCCcceEEecCCce
Confidence 5667889999999999999999999999999999976541 11112223457789999999999999999999999
Q ss_pred EEEEECCCCcEEEEE------EEEeecCCceEEEecCcc
Q 004998 681 VQVGQVLHLIYFSAL------YCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 681 v~lWDv~tg~~~~~v------~~v~~~~~~~~~~~~~~~ 713 (720)
|++||+++++|+..+ .=+.|+|.+.++.-|.=|
T Consensus 89 ir~wd~r~~k~~~~i~~~~eni~i~wsp~g~~~~~~~kd 127 (313)
T KOG1407|consen 89 IRIWDIRSGKCTARIETKGENINITWSPDGEYIAVGNKD 127 (313)
T ss_pred EEEEEeccCcEEEEeeccCcceEEEEcCCCCEEEEecCc
Confidence 999999999999873 235778887777766544
No 456
>KOG0283 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.28 E-value=8.6e-12 Score=140.52 Aligned_cols=104 Identities=9% Similarity=0.143 Sum_probs=93.1
Q ss_pred CCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcE
Q 004998 602 DLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVV 681 (720)
Q Consensus 602 ~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~v 681 (720)
.+.||+.-|.+|+|+.++ +|.|+|+|||||+|++... .++..+.|.+-|+||+|+|-+.++++|||-||.|
T Consensus 364 ef~GHt~DILDlSWSKn~-fLLSSSMDKTVRLWh~~~~--------~CL~~F~HndfVTcVaFnPvDDryFiSGSLD~Kv 434 (712)
T KOG0283|consen 364 EFKGHTADILDLSWSKNN-FLLSSSMDKTVRLWHPGRK--------ECLKVFSHNDFVTCVAFNPVDDRYFISGSLDGKV 434 (712)
T ss_pred hhhccchhheecccccCC-eeEeccccccEEeecCCCc--------ceeeEEecCCeeEEEEecccCCCcEeecccccce
Confidence 346779999999999854 8889999999999998765 5788889999999999999999999999999999
Q ss_pred EEEECCCCcEEEE------EEEEeecCCceEEEecCccc
Q 004998 682 QVGQVLHLIYFSA------LYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 682 ~lWDv~tg~~~~~------v~~v~~~~~~~~~~~~~~~~ 714 (720)
|||++...+.+.. |++|+|.|.|.+.+=|+|+=
T Consensus 435 RiWsI~d~~Vv~W~Dl~~lITAvcy~PdGk~avIGt~~G 473 (712)
T KOG0283|consen 435 RLWSISDKKVVDWNDLRDLITAVCYSPDGKGAVIGTFNG 473 (712)
T ss_pred EEeecCcCeeEeehhhhhhheeEEeccCCceEEEEEecc
Confidence 9999998887664 99999999999999999874
No 457
>KOG0286 consensus G-protein beta subunit [General function prediction only]
Probab=99.28 E-value=2.3e-11 Score=122.11 Aligned_cols=119 Identities=14% Similarity=0.159 Sum_probs=99.4
Q ss_pred chhhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECC-CCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cC
Q 004998 578 PFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-AS 655 (720)
Q Consensus 578 ~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~-dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~ 655 (720)
.-.+..|.+|..-+.+.+..+ .||++-|.+|+++| +++.|+|||.|++.+|||.+.. ..++.+ .|
T Consensus 162 ~SGD~TCalWDie~g~~~~~f-----~GH~gDV~slsl~p~~~ntFvSg~cD~~aklWD~R~~--------~c~qtF~gh 228 (343)
T KOG0286|consen 162 GSGDMTCALWDIETGQQTQVF-----HGHTGDVMSLSLSPSDGNTFVSGGCDKSAKLWDVRSG--------QCVQTFEGH 228 (343)
T ss_pred cCCCceEEEEEcccceEEEEe-----cCCcccEEEEecCCCCCCeEEecccccceeeeeccCc--------ceeEeeccc
Confidence 344556777777666555554 57799999999999 9999999999999999998876 345554 56
Q ss_pred CCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE---------EEEEeecCCceEEEec
Q 004998 656 RSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA---------LYCIVLNKLLIIFRYG 710 (720)
Q Consensus 656 ~~~i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~---------v~~v~~~~~~~~~~~~ 710 (720)
.+.|++|+|-|+ +.-+||||.|+++|++|+++.+.+.. |++|+||..|-++-.|
T Consensus 229 esDINsv~ffP~-G~afatGSDD~tcRlyDlRaD~~~a~ys~~~~~~gitSv~FS~SGRlLfag 291 (343)
T KOG0286|consen 229 ESDINSVRFFPS-GDAFATGSDDATCRLYDLRADQELAVYSHDSIICGITSVAFSKSGRLLFAG 291 (343)
T ss_pred ccccceEEEccC-CCeeeecCCCceeEEEeecCCcEEeeeccCcccCCceeEEEcccccEEEee
Confidence 889999999995 56899999999999999999988875 8999999999887766
No 458
>KOG0647 consensus mRNA export protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.28 E-value=1.8e-11 Score=123.40 Aligned_cols=103 Identities=12% Similarity=0.224 Sum_probs=83.6
Q ss_pred CCCeEEEEECC-CCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEE
Q 004998 607 SNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQ 685 (720)
Q Consensus 607 ~~~V~sv~f~~-dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~v~lWD 685 (720)
..-|++|+||| ...++|.||.|++||+||+... +. ..|.....+.+.|.|+||+.+ ++.+++|+.|+.+|+||
T Consensus 27 ~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~-g~----~~~ka~~~~~~PvL~v~Wsdd-gskVf~g~~Dk~~k~wD 100 (347)
T KOG0647|consen 27 EDSISALAFSPQADNLLAAGSWDGTVRIWEVQNS-GQ----LVPKAQQSHDGPVLDVCWSDD-GSKVFSGGCDKQAKLWD 100 (347)
T ss_pred ccchheeEeccccCceEEecccCCceEEEEEecC-Cc----ccchhhhccCCCeEEEEEccC-CceEEeeccCCceEEEE
Confidence 46799999999 5557889999999999998763 11 123333456789999999985 47999999999999999
Q ss_pred CCCCcEEEE------EEEEeecCCce--EEEecCccce
Q 004998 686 VLHLIYFSA------LYCIVLNKLLI--IFRYGMFQEV 715 (720)
Q Consensus 686 v~tg~~~~~------v~~v~~~~~~~--~~~~~~~~~~ 715 (720)
+.+||..+- |.+++|=+... ++++||+|+-
T Consensus 101 L~S~Q~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKT 138 (347)
T KOG0647|consen 101 LASGQVSQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKT 138 (347)
T ss_pred ccCCCeeeeeecccceeEEEEecCCCcceeEecccccc
Confidence 999987654 88999977666 9999999984
No 459
>PTZ00421 coronin; Provisional
Probab=99.27 E-value=4.4e-11 Score=135.21 Aligned_cols=102 Identities=15% Similarity=0.151 Sum_probs=82.7
Q ss_pred CCCCCCCCeEEEEECCCC-CEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCEEEEEEecCCCCEEEEEeCCC
Q 004998 602 DLLNSSNLVCSLSFDRDG-ELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFEG 679 (720)
Q Consensus 602 ~~~~~~~~V~sv~f~~dg-~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~v~~~~~~~~~laS~s~D~ 679 (720)
.+.+|...|.+|+|+|++ .+|||||.|++|+|||+.+. .++..+. |...|.+|+|+|+ +++|||++.||
T Consensus 120 ~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg--------~~~~~l~~h~~~V~sla~spd-G~lLatgs~Dg 190 (493)
T PTZ00421 120 HLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERG--------KAVEVIKCHSDQITSLEWNLD-GSLLCTTSKDK 190 (493)
T ss_pred EecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCC--------eEEEEEcCCCCceEEEEEECC-CCEEEEecCCC
Confidence 356789999999999986 69999999999999998765 2344443 5678999999995 57999999999
Q ss_pred cEEEEECCCCcEEEEE--------EEEeecCCceEEEecCc
Q 004998 680 VVQVGQVLHLIYFSAL--------YCIVLNKLLIIFRYGMF 712 (720)
Q Consensus 680 ~v~lWDv~tg~~~~~v--------~~v~~~~~~~~~~~~~~ 712 (720)
+|+|||+++++.+.++ ..+.|.+....+.+..|
T Consensus 191 ~IrIwD~rsg~~v~tl~~H~~~~~~~~~w~~~~~~ivt~G~ 231 (493)
T PTZ00421 191 KLNIIDPRDGTIVSSVEAHASAKSQRCLWAKRKDLIITLGC 231 (493)
T ss_pred EEEEEECCCCcEEEEEecCCCCcceEEEEcCCCCeEEEEec
Confidence 9999999999988762 35677777666665544
No 460
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.25 E-value=9.9e-12 Score=137.59 Aligned_cols=219 Identities=17% Similarity=0.124 Sum_probs=159.0
Q ss_pred ccceeeeehhhhcccCC-CCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHH----H
Q 004998 59 DFELRKHSDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVE----I 133 (720)
Q Consensus 59 ~~~~r~~~e~~~Ls~l~-HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~----a 133 (720)
...+|+.+|+.-...++ |+|.++.+..+. ... +.|+-+|++|.+|.++......-++...++.++.+... |
T Consensus 159 ~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e-~~~---~lfiqtE~~~~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~a 234 (524)
T KOG0601|consen 159 LDSKRKLREFLSHHKIDSHENPVRDSPAWE-GSG---ILFIQTELCGESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTA 234 (524)
T ss_pred cccccccchhhcccccCccccccccCcccc-cCC---cceeeeccccchhHHhhhcccccCCchhhhhHHhhhhhccccc
Confidence 34456667765555543 999999888333 332 57999999999999998776666899999999999999 9
Q ss_pred HHHHHHcCceeccCCCCcEEEccC-CceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccccccccc
Q 004998 134 VYAAHSQGIVVHNVRPSCFVMSSF-NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQL 212 (720)
Q Consensus 134 L~yLHs~gIvHrDLKP~NILl~~~-~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgl 212 (720)
|.++|+.+++|-|+||+||++..+ ...++.|||....++... |
T Consensus 235 l~~~hs~~~~~~~~kp~~i~~~~~~~s~~~~df~~v~~i~~~~----------------------------------~-- 278 (524)
T KOG0601|consen 235 LSHLHSNNIVHDDLKPANIFTTSDWTSCKLTDFGLVSKISDGN----------------------------------F-- 278 (524)
T ss_pred ccccCCCcccccccchhheecccccceeecCCcceeEEccCCc----------------------------------c--
Confidence 999999999999999999999988 778888887765443321 1
Q ss_pred ccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccc
Q 004998 213 VTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCAS 292 (720)
Q Consensus 213 a~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~s 292 (720)
+.... . .....|...|++||.+.+. +++++
T Consensus 279 ~~~~~---------------------------~----------------------~~r~~~~~~Y~~ke~~~~l-~~~~~ 308 (524)
T KOG0601|consen 279 SSVFK---------------------------V----------------------SKRPEGDCIYAAKELLNGL-ATFAS 308 (524)
T ss_pred cccee---------------------------e----------------------eecCCCCceEeChhhhccc-cchHh
Confidence 10000 0 0012467789999999777 89999
Q ss_pred cchhhhhhhhhccccCCCC-chHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 293 DIYRLGVLLFELFCPFSTG-EEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 293 DIwSLGvll~eLltpf~~~-~~~~~~~~~l~~~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|||+||.++.+..+.+... ......+..++++.+|..+.... ......+..|+..+|-.|+++..+++|+++...
T Consensus 309 di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~ 385 (524)
T KOG0601|consen 309 DIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSK 385 (524)
T ss_pred hhcchhhhhHhhHhhcccccCCCCCCccccccccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccch
Confidence 9999999999877732211 11112234455555666554333 233368889999999999999999999999854
No 461
>KOG0293 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.25 E-value=1.6e-11 Score=127.88 Aligned_cols=106 Identities=16% Similarity=0.182 Sum_probs=89.6
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccce--EEecCCCCEEEEEEecCCCCEEEEEeCCCc
Q 004998 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPV--VEMASRSKLSSICWNSYIKSQIASSNFEGV 680 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~--~~~~~~~~i~~v~~~~~~~~~laS~s~D~~ 680 (720)
|..|++.|.-+.||++|+||||||.|.|..||+... +.|..+ +..+|...|+-+.|||++ .+|++|+.|..
T Consensus 220 l~~htdEVWfl~FS~nGkyLAsaSkD~Taiiw~v~~------d~~~kl~~tlvgh~~~V~yi~wSPDd-ryLlaCg~~e~ 292 (519)
T KOG0293|consen 220 LQDHTDEVWFLQFSHNGKYLASASKDSTAIIWIVVY------DVHFKLKKTLVGHSQPVSYIMWSPDD-RYLLACGFDEV 292 (519)
T ss_pred HhhCCCcEEEEEEcCCCeeEeeccCCceEEEEEEec------CcceeeeeeeecccCceEEEEECCCC-CeEEecCchHh
Confidence 456799999999999999999999999999999533 222222 344668889999999976 58999999999
Q ss_pred EEEEECCCCcEEEE--------EEEEeecCCceEEEecCccce
Q 004998 681 VQVGQVLHLIYFSA--------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 681 v~lWDv~tg~~~~~--------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
+++|||.||.+... +.|++|.|++--++.||-|--
T Consensus 293 ~~lwDv~tgd~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~dr~ 335 (519)
T KOG0293|consen 293 LSLWDVDTGDLRHLYPSGLGFSVSSCAWCPDGFRFVTGSPDRT 335 (519)
T ss_pred eeeccCCcchhhhhcccCcCCCcceeEEccCCceeEecCCCCc
Confidence 99999999988764 889999999999999998743
No 462
>KOG0295 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.25 E-value=3e-11 Score=124.40 Aligned_cols=128 Identities=9% Similarity=0.062 Sum_probs=102.5
Q ss_pred ccchhhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecC
Q 004998 576 INPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS 655 (720)
Q Consensus 576 ~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 655 (720)
++.|.+...+-|...+.--+-++. +|+.||..|+.+.||.+||+||.|.++++|=+++.. |....-.|
T Consensus 209 lS~srD~tik~We~~tg~cv~t~~-----~h~ewvr~v~v~~DGti~As~s~dqtl~vW~~~t~~-------~k~~lR~h 276 (406)
T KOG0295|consen 209 LSCSRDNTIKAWECDTGYCVKTFP-----GHSEWVRMVRVNQDGTIIASCSNDQTLRVWVVATKQ-------CKAELREH 276 (406)
T ss_pred eecccccceeEEecccceeEEecc-----CchHhEEEEEecCCeeEEEecCCCceEEEEEeccch-------hhhhhhcc
Confidence 666667777777776666665554 458899999999999999999999999999987761 11112234
Q ss_pred CCCEEEEEEecCC--------------CCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccc
Q 004998 656 RSKLSSICWNSYI--------------KSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 656 ~~~i~~v~~~~~~--------------~~~laS~s~D~~v~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~ 714 (720)
...|-|++|-|.. +++|+|+|.|+|||+||+.||.|+.| |..++|+|.|.+|.|-+=|+
T Consensus 277 Eh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~cL~tL~ghdnwVr~~af~p~Gkyi~ScaDDk 356 (406)
T KOG0295|consen 277 EHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMCLFTLVGHDNWVRGVAFSPGGKYILSCADDK 356 (406)
T ss_pred ccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCCeEEEEEecccceeeeeEEcCCCeEEEEEecCC
Confidence 5678888887643 25899999999999999999999998 88999999999999987765
Q ss_pred e
Q 004998 715 V 715 (720)
Q Consensus 715 ~ 715 (720)
-
T Consensus 357 t 357 (406)
T KOG0295|consen 357 T 357 (406)
T ss_pred c
Confidence 3
No 463
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.25 E-value=1.1e-11 Score=127.83 Aligned_cols=103 Identities=10% Similarity=0.027 Sum_probs=78.9
Q ss_pred eeeehhhhcccCCCCCc--eecccceeecCCCCCcEEEEEec-CC-CCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 004998 63 RKHSDGVELTHGDHLRN--QGGLSGVCENEAAIDPFVHAIEW-GD-VSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnI--V~l~~~~~~~~~~~~~~~lv~E~-~g-gsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
|..+|..++.++.|++| +..++.........+..++|||+ .| .+|.+++... .+++. .+.||+.+|.+||
T Consensus 86 r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~~~~~~~~lV~e~l~G~~~L~~~l~~~--~l~~~----~~~~i~~~l~~lH 159 (239)
T PRK01723 86 RAFAEFRLLAQLYEAGLPVPRPIAARVVRHGLFYRADILIERIEGARDLVALLQEA--PLSEE----QWQAIGQLIARFH 159 (239)
T ss_pred HHHHHHHHHHHHHhCCCCCceeEeeeeeecCcceeeeEEEEecCCCCCHHHHHhcC--CCCHH----HHHHHHHHHHHHH
Confidence 44578889999999886 56666322222222234699999 65 7999988543 35554 3678999999999
Q ss_pred HcCceeccCCCCcEEEccCCceEEeccCcccCC
Q 004998 139 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDS 171 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~ 171 (720)
++||+||||||.|||++.++.++|+|||.+...
T Consensus 160 ~~GI~HrDlkp~NILv~~~~~v~LIDfg~~~~~ 192 (239)
T PRK01723 160 DAGVYHADLNAHNILLDPDGKFWLIDFDRGELR 192 (239)
T ss_pred HCCCCCCCCCchhEEEcCCCCEEEEECCCcccC
Confidence 999999999999999999899999999988553
No 464
>KOG0286 consensus G-protein beta subunit [General function prediction only]
Probab=99.25 E-value=5.5e-11 Score=119.39 Aligned_cols=107 Identities=7% Similarity=0.019 Sum_probs=92.7
Q ss_pred CCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCCCc
Q 004998 602 DLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGV 680 (720)
Q Consensus 602 ~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~v~~~~~~~~~laS~s~D~~ 680 (720)
.|.+|++.++|+.|-+| ..|.|||-|.|+-+||++++. .+..+ +|.+.|.+|+++|...+.++||+.|++
T Consensus 140 ~l~gHtgylScC~f~dD-~~ilT~SGD~TCalWDie~g~--------~~~~f~GH~gDV~slsl~p~~~ntFvSg~cD~~ 210 (343)
T KOG0286|consen 140 ELAGHTGYLSCCRFLDD-NHILTGSGDMTCALWDIETGQ--------QTQVFHGHTGDVMSLSLSPSDGNTFVSGGCDKS 210 (343)
T ss_pred eecCccceeEEEEEcCC-CceEecCCCceEEEEEcccce--------EEEEecCCcccEEEEecCCCCCCeEEecccccc
Confidence 46678999999999884 467788999999999998872 34444 458889999999977889999999999
Q ss_pred EEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceEE
Q 004998 681 VQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 681 v~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
.+|||++.|.|+++ |++|.|-|.|-.+++||=|..-.
T Consensus 211 aklWD~R~~~c~qtF~ghesDINsv~ffP~G~afatGSDD~tcR 254 (343)
T KOG0286|consen 211 AKLWDVRSGQCVQTFEGHESDINSVRFFPSGDAFATGSDDATCR 254 (343)
T ss_pred eeeeeccCcceeEeecccccccceEEEccCCCeeeecCCCceeE
Confidence 99999999999998 89999999999999999876543
No 465
>KOG0303 consensus Actin-binding protein Coronin, contains WD40 repeats [Cytoskeleton]
Probab=99.24 E-value=1.8e-11 Score=127.13 Aligned_cols=112 Identities=14% Similarity=0.195 Sum_probs=95.4
Q ss_pred CCCCCCCCeEEEEECCCCC-EEEEeeCCCcEEEeeCCcccccccccccceEEecC-CCCEEEEEEecCCCCEEEEEeCCC
Q 004998 602 DLLNSSNLVCSLSFDRDGE-LFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS-RSKLSSICWNSYIKSQIASSNFEG 679 (720)
Q Consensus 602 ~~~~~~~~V~sv~f~~dg~-~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~i~~v~~~~~~~~~laS~s~D~ 679 (720)
-+-||+..|..++|+|-++ .|||||.|.+|+||++-.. ....+...|++++.+ .-+|--|.|.|--.|+|+|+++|.
T Consensus 76 ~v~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~-~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn 154 (472)
T KOG0303|consen 76 LVCGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPEN-GLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDN 154 (472)
T ss_pred CccCccccccccccCccCCceeecCCCCceEEEEECCCc-ccccCcccceEEEeecceeEEEEeecccchhhHhhccCCc
Confidence 3568999999999999665 6999999999999997532 112234468888765 557999999999899999999999
Q ss_pred cEEEEECCCCcEEEE------EEEEeecCCceEEEecCccc
Q 004998 680 VVQVGQVLHLIYFSA------LYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 680 ~v~lWDv~tg~~~~~------v~~v~~~~~~~~~~~~~~~~ 714 (720)
+|.||||.||+.+-+ |++++||..|+++.+..=|+
T Consensus 155 ~v~iWnv~tgeali~l~hpd~i~S~sfn~dGs~l~TtckDK 195 (472)
T KOG0303|consen 155 TVSIWNVGTGEALITLDHPDMVYSMSFNRDGSLLCTTCKDK 195 (472)
T ss_pred eEEEEeccCCceeeecCCCCeEEEEEeccCCceeeeecccc
Confidence 999999999998776 99999999999999998876
No 466
>KOG0316 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.24 E-value=3.7e-11 Score=117.21 Aligned_cols=125 Identities=12% Similarity=0.167 Sum_probs=106.8
Q ss_pred hhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecC-CCC
Q 004998 580 LEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS-RSK 658 (720)
Q Consensus 580 ~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~ 658 (720)
.+.-+.+|.-++.|++..++ +|...|+.|+|+.+...+++||.|.++|+||+++... .|++.+.. ...
T Consensus 79 gDk~v~vwDV~TGkv~Rr~r-----gH~aqVNtV~fNeesSVv~SgsfD~s~r~wDCRS~s~------ePiQildea~D~ 147 (307)
T KOG0316|consen 79 GDKAVQVWDVNTGKVDRRFR-----GHLAQVNTVRFNEESSVVASGSFDSSVRLWDCRSRSF------EPIQILDEAKDG 147 (307)
T ss_pred CCceEEEEEcccCeeeeecc-----cccceeeEEEecCcceEEEeccccceeEEEEcccCCC------CccchhhhhcCc
Confidence 34467889999999998876 3489999999999999999999999999999987632 47776655 788
Q ss_pred EEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-----EEEEeecCCceEEEecCccceEEc
Q 004998 659 LSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-----LYCIVLNKLLIIFRYGMFQEVKYL 718 (720)
Q Consensus 659 i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~-----v~~v~~~~~~~~~~~~~~~~~~~~ 718 (720)
|++|..+. +.|++||.||++|.+|++.|+.... |+||.|++.+++..-|++|-...|
T Consensus 148 V~Si~v~~---heIvaGS~DGtvRtydiR~G~l~sDy~g~pit~vs~s~d~nc~La~~l~stlrL 209 (307)
T KOG0316|consen 148 VSSIDVAE---HEIVAGSVDGTVRTYDIRKGTLSSDYFGHPITSVSFSKDGNCSLASSLDSTLRL 209 (307)
T ss_pred eeEEEecc---cEEEeeccCCcEEEEEeecceeehhhcCCcceeEEecCCCCEEEEeeccceeee
Confidence 99999985 5799999999999999999987665 999999999999999998865443
No 467
>KOG0313 consensus Microtubule binding protein YTM1 (contains WD40 repeats) [Cytoskeleton]
Probab=99.23 E-value=5.9e-11 Score=122.81 Aligned_cols=112 Identities=20% Similarity=0.290 Sum_probs=93.9
Q ss_pred CCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCccccc-----------------ccccccceEEec-CCCCEEEEEEec
Q 004998 605 NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINE-----------------NRDIHYPVVEMA-SRSKLSSICWNS 666 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~-----------------~~~~~~~~~~~~-~~~~i~~v~~~~ 666 (720)
||...|-||+-++||..|+|||.|.+|+||+..+-... ......|+..+. |+.+|++|.|++
T Consensus 191 GHk~~V~sVsv~~sgtr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~V~w~d 270 (423)
T KOG0313|consen 191 GHKRSVDSVSVDSSGTRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEGHTEPVSSVVWSD 270 (423)
T ss_pred ccccceeEEEecCCCCeEEeecccceeeecccCCCccccccccchhhhhhhhhhhcccccCceEEecccccceeeEEEcC
Confidence 89999999999999999999999999999994431000 012345777764 588999999998
Q ss_pred CCCCEEEEEeCCCcEEEEECCCCcEEEE------EEEEeecCCceEEEecCccceEEc
Q 004998 667 YIKSQIASSNFEGVVQVGQVLHLIYFSA------LYCIVLNKLLIIFRYGMFQEVKYL 718 (720)
Q Consensus 667 ~~~~~laS~s~D~~v~lWDv~tg~~~~~------v~~v~~~~~~~~~~~~~~~~~~~~ 718 (720)
...+.|+|+|-|||+||+.+|+++.+ ++||++++.+.++++|+-|.-..|
T Consensus 271 --~~v~yS~SwDHTIk~WDletg~~~~~~~~~ksl~~i~~~~~~~Ll~~gssdr~irl 326 (423)
T KOG0313|consen 271 --ATVIYSVSWDHTIKVWDLETGGLKSTLTTNKSLNCISYSPLSKLLASGSSDRHIRL 326 (423)
T ss_pred --CCceEeecccceEEEEEeecccceeeeecCcceeEeecccccceeeecCCCCceee
Confidence 45899999999999999999999876 899999999999999998875443
No 468
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.22 E-value=1.2e-11 Score=145.78 Aligned_cols=123 Identities=18% Similarity=0.250 Sum_probs=100.4
Q ss_pred EEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEc-------cCCceEEeccCc
Q 004998 96 FVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMS-------SFNHVSFIESAS 167 (720)
Q Consensus 96 ~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~-------~~~~vkliDfg~ 167 (720)
-++|+|| .-|||.++++ ..+.+++..++.+..|++..|++||..+|||+||||+|+||. .+--++|||||.
T Consensus 769 S~lv~ey~~~Gtlld~~N-~~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~ 847 (974)
T KOG1166|consen 769 SVLVSEYSPYGTLLDLIN-TNKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGR 847 (974)
T ss_pred ceeeeeccccccHHHhhc-cCCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEEEeccc
Confidence 4899999 9999999995 555699999999999999999999999999999999999996 233589999998
Q ss_pred ccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccc
Q 004998 168 CSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKI 247 (720)
Q Consensus 168 a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~ 247 (720)
+.|.-.- . .
T Consensus 848 siDm~lf---------------------------------------p--~------------------------------ 856 (974)
T KOG1166|consen 848 SIDMKLF---------------------------------------P--D------------------------------ 856 (974)
T ss_pred ceeeeEc---------------------------------------C--C------------------------------
Confidence 7442100 0 0
Q ss_pred cccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhcccc
Q 004998 248 LDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFCP 307 (720)
Q Consensus 248 ~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLltp 307 (720)
+ .+-...++|-.+-.+|+..|.++++.+|.|.|..+++-||.+
T Consensus 857 -------------~----~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG 899 (974)
T KOG1166|consen 857 -------------G----TKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFG 899 (974)
T ss_pred -------------C----cEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHH
Confidence 0 000114678889999999999999999999999999999974
No 469
>KOG0275 consensus Conserved WD40 repeat-containing protein [General function prediction only]
Probab=99.22 E-value=3.5e-12 Score=128.81 Aligned_cols=125 Identities=17% Similarity=0.237 Sum_probs=107.7
Q ss_pred hhhhhhccccceEEeeeecc---CCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe--cC
Q 004998 581 EGLCKYLSFSKLRVKADLNQ---GDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM--AS 655 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~~---~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~--~~ 655 (720)
+++...|.|.+.|+...|++ ..+..+...|.|+.|++|.+++|||+.||+||||-+.++. ++..+ .|
T Consensus 234 DGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDGkIKvWri~tG~--------ClRrFdrAH 305 (508)
T KOG0275|consen 234 DGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDGKIKVWRIETGQ--------CLRRFDRAH 305 (508)
T ss_pred cceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCCcEEEEEEecch--------HHHHhhhhh
Confidence 44667899999999999993 4577889999999999999999999999999999988872 23222 34
Q ss_pred CCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccc
Q 004998 656 RSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 656 ~~~i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~ 714 (720)
...|.|+.||.++ ++|.|+|+|.||||--+.+|+++.+ |+-+.|+++|..|.+.|-|-
T Consensus 306 tkGvt~l~FSrD~-SqiLS~sfD~tvRiHGlKSGK~LKEfrGHsSyvn~a~ft~dG~~iisaSsDg 370 (508)
T KOG0275|consen 306 TKGVTCLSFSRDN-SQILSASFDQTVRIHGLKSGKCLKEFRGHSSYVNEATFTDDGHHIISASSDG 370 (508)
T ss_pred ccCeeEEEEccCc-chhhcccccceEEEeccccchhHHHhcCccccccceEEcCCCCeEEEecCCc
Confidence 6679999999965 5899999999999999999999987 88899999999999988774
No 470
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.22 E-value=6.5e-12 Score=128.70 Aligned_cols=206 Identities=18% Similarity=0.158 Sum_probs=139.3
Q ss_pred cccCCCCCceecccceeecCC-CCCcEEEEEec-CCCCHHHHHh---CCCCCCCHHHHHHHHHHHHHHHHHHHHc--Cce
Q 004998 71 LTHGDHLRNQGGLSGVCENEA-AIDPFVHAIEW-GDVSLRQWLD---KPKRSVDVYECLHIFRQIVEIVYAAHSQ--GIV 143 (720)
Q Consensus 71 Ls~l~HpnIV~l~~~~~~~~~-~~~~~~lv~E~-~ggsL~~~L~---~~~~~l~~~~~~~i~~QIl~aL~yLHs~--gIv 143 (720)
|-++.|-|||+++..|-.... +...+.++.|| ..|+|.++|+ +.+..+......+|+.||+.||.|||+. -|+
T Consensus 121 llqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~Ppii 200 (458)
T KOG1266|consen 121 LLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPPII 200 (458)
T ss_pred HHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCccc
Confidence 556889999999984432222 34457889999 8999999993 3445588889999999999999999984 699
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
|+++...-|++..+|-+|+- .. .+ |+- +
T Consensus 201 hgnlTc~tifiq~ngLIkig---~~----ap----------------------------------~s~-------h---- 228 (458)
T KOG1266|consen 201 HGNLTCDTIFIQHNGLIKIG---SV----AP----------------------------------DST-------H---- 228 (458)
T ss_pred cCCcchhheeecCCceEEec---cc----Cc----------------------------------ccc-------c----
Confidence 99999999999999988872 11 00 000 0
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
.....+ +. .+ .....+-++|.|||.-.....+.++|||++|....|
T Consensus 229 ----------------------~s~~~~---~~-~E--------k~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAle 274 (458)
T KOG1266|consen 229 ----------------------PSVNST---RE-AE--------KSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALE 274 (458)
T ss_pred ----------------------hhhhhh---hH-hh--------hhccccCCccccCCcCcccccccchhhhhhhHHHHH
Confidence 000000 00 00 001235678999998766667889999999988888
Q ss_pred ccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 304 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 304 Llt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|.. |-.+.... ..-..+.. -.+....+..++++.+||+.+|..||+|+++|.||.+-+.
T Consensus 275 mailEiq~tnseS~~-~~ee~ia~----~i~~len~lqr~~i~kcl~~eP~~rp~ar~llfHpllfeV 337 (458)
T KOG1266|consen 275 MAILEIQSTNSESKV-EVEENIAN----VIIGLENGLQRGSITKCLEGEPNGRPDARLLLFHPLLFEV 337 (458)
T ss_pred HHHheeccCCCccee-ehhhhhhh----heeeccCccccCcCcccccCCCCCCcchhhhhcCceeeec
Confidence 875 22221110 11111111 1122233444589999999999999999999999987665
No 471
>KOG0645 consensus WD40 repeat protein [General function prediction only]
Probab=99.21 E-value=1.2e-10 Score=115.84 Aligned_cols=108 Identities=13% Similarity=0.218 Sum_probs=86.1
Q ss_pred CCCCCCCCeEEEEECCC-CCEEEEeeCCCcEEEeeCCcccccccccccceEE--ecCCCCEEEEEEecCCCCEEEEEeCC
Q 004998 602 DLLNSSNLVCSLSFDRD-GELFAAAGVNKKIKVFECDAIINENRDIHYPVVE--MASRSKLSSICWNSYIKSQIASSNFE 678 (720)
Q Consensus 602 ~~~~~~~~V~sv~f~~d-g~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~--~~~~~~i~~v~~~~~~~~~laS~s~D 678 (720)
.+.+|.+.|.+++|+|- |.+|||||.||+||||+.... . ... .... -.|+-.|.+|+|+|+ +++|||||+|
T Consensus 9 ~~~gh~~r~W~~awhp~~g~ilAscg~Dk~vriw~~~~~--~--s~~-ck~vld~~hkrsVRsvAwsp~-g~~La~aSFD 82 (312)
T KOG0645|consen 9 KLSGHKDRVWSVAWHPGKGVILASCGTDKAVRIWSTSSG--D--SWT-CKTVLDDGHKRSVRSVAWSPH-GRYLASASFD 82 (312)
T ss_pred eecCCCCcEEEEEeccCCceEEEeecCCceEEEEecCCC--C--cEE-EEEeccccchheeeeeeecCC-CcEEEEeecc
Confidence 45677999999999998 999999999999999997642 0 111 1111 135677999999996 5699999999
Q ss_pred CcEEEEECCCC--cEEEE-------EEEEeecCCceEEEecCccce
Q 004998 679 GVVQVGQVLHL--IYFSA-------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 679 ~~v~lWDv~tg--~~~~~-------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
.|+-||-=..+ +|+.+ |-||+||+.|.++++-|=|+-
T Consensus 83 ~t~~Iw~k~~~efecv~~lEGHEnEVK~Vaws~sG~~LATCSRDKS 128 (312)
T KOG0645|consen 83 ATVVIWKKEDGEFECVATLEGHENEVKCVAWSASGNYLATCSRDKS 128 (312)
T ss_pred ceEEEeecCCCceeEEeeeeccccceeEEEEcCCCCEEEEeeCCCe
Confidence 99999976644 45554 899999999999999887764
No 472
>KOG0302 consensus Ribosome Assembly protein [General function prediction only]
Probab=99.21 E-value=5.4e-11 Score=122.98 Aligned_cols=107 Identities=16% Similarity=0.205 Sum_probs=82.9
Q ss_pred CCCCCCCCeEEEEECCCCC-EEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCc
Q 004998 602 DLLNSSNLVCSLSFDRDGE-LFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGV 680 (720)
Q Consensus 602 ~~~~~~~~V~sv~f~~dg~-~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~ 680 (720)
-+.+|+.-|-.+.|||..+ .|||||.|++|||||++..-.. ..+..-.|.+.|+-|+||.... +||||+.||+
T Consensus 252 Pf~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~-----~~~~~kAh~sDVNVISWnr~~~-lLasG~DdGt 325 (440)
T KOG0302|consen 252 PFTGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKK-----AAVSTKAHNSDVNVISWNRREP-LLASGGDDGT 325 (440)
T ss_pred cccccccchhhhccCCccCceEEeeecCceEEEEEecCCCcc-----ceeEeeccCCceeeEEccCCcc-eeeecCCCce
Confidence 4677999999999999775 7999999999999999876211 1222335678999999998665 9999999999
Q ss_pred EEEEECC---CCcEEEE-------EEEEeecC--CceEEEecCccc
Q 004998 681 VQVGQVL---HLIYFSA-------LYCIVLNK--LLIIFRYGMFQE 714 (720)
Q Consensus 681 v~lWDv~---tg~~~~~-------v~~v~~~~--~~~~~~~~~~~~ 714 (720)
++|||++ .|+.+.+ |+||.|+| .+.+-++|.=++
T Consensus 326 ~~iwDLR~~~~~~pVA~fk~Hk~pItsieW~p~e~s~iaasg~D~Q 371 (440)
T KOG0302|consen 326 LSIWDLRQFKSGQPVATFKYHKAPITSIEWHPHEDSVIAASGEDNQ 371 (440)
T ss_pred EEEEEhhhccCCCcceeEEeccCCeeEEEeccccCceEEeccCCCc
Confidence 9999997 4555555 89999986 444555554433
No 473
>KOG0292 consensus Vesicle coat complex COPI, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.21 E-value=2.4e-11 Score=136.46 Aligned_cols=128 Identities=10% Similarity=0.141 Sum_probs=104.1
Q ss_pred ccchhhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecC
Q 004998 576 INPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS 655 (720)
Q Consensus 576 ~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 655 (720)
|..--++.+++|.|.--..+ ..+..|.+.|..|+|+|++.+|+|||.|.+||||++.+.. |-.+..+|
T Consensus 25 LtslHsG~IQlWDYRM~tli-----~rFdeHdGpVRgv~FH~~qplFVSGGDDykIkVWnYk~rr-------clftL~GH 92 (1202)
T KOG0292|consen 25 LTSLHSGVIQLWDYRMGTLI-----DRFDEHDGPVRGVDFHPTQPLFVSGGDDYKIKVWNYKTRR-------CLFTLLGH 92 (1202)
T ss_pred EEeecCceeeeehhhhhhHH-----hhhhccCCccceeeecCCCCeEEecCCccEEEEEecccce-------ehhhhccc
Confidence 33344556788888422222 2356679999999999999999999999999999997651 23344456
Q ss_pred CCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceE
Q 004998 656 RSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 656 ~~~i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
-+-|..+.|.+. ..+|.|||.|.||+||+-.+++||.. |.|..|+|.--+|+|+|+|+--
T Consensus 93 lDYVRt~~FHhe-yPWIlSASDDQTIrIWNwqsr~~iavltGHnHYVMcAqFhptEDlIVSaSLDQTV 159 (1202)
T KOG0292|consen 93 LDYVRTVFFHHE-YPWILSASDDQTIRIWNWQSRKCIAVLTGHNHYVMCAQFHPTEDLIVSASLDQTV 159 (1202)
T ss_pred cceeEEeeccCC-CceEEEccCCCeEEEEeccCCceEEEEecCceEEEeeccCCccceEEEecccceE
Confidence 778999999984 56999999999999999999999987 8999999999999999999853
No 474
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.20 E-value=4.2e-11 Score=138.80 Aligned_cols=228 Identities=18% Similarity=0.207 Sum_probs=156.7
Q ss_pred hcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCC
Q 004998 70 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 148 (720)
Q Consensus 70 ~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLK 148 (720)
++-...||-+++.+. ........+++|+| .|++|...|.+.+ ..+..-++.++..++.+++|||+..++|+|++
T Consensus 857 ~~i~p~~P~v~~~~~----s~~~rsP~~L~~~~~~~~~~~Skl~~~~-~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~ 931 (1205)
T KOG0606|consen 857 ILITPRSPAVVRSFP----SFPCRSPLPLVGHYLNGGDLPSKLHNSG-CLSAEPARSPILERVQSLESLHSSLRKHRDLK 931 (1205)
T ss_pred ccccCCCCceecccC----CCCCCCCcchhhHHhccCCchhhhhcCC-CcccccccchhHHHHhhhhccccchhhccccc
Confidence 333345677777666 23333467999999 8999999886655 37788888899999999999999999999999
Q ss_pred CCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccccccc-ccccCCCCCCccccccc
Q 004998 149 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDL-QLVTAPTNDLSEASCMQ 227 (720)
Q Consensus 149 P~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Df-gla~~~~~~~~~~~~~q 227 (720)
|.|+++..+++.++.+||+....|.-... .+. |..+.....+
T Consensus 932 p~~~l~~~~gh~~l~~~~t~~~vg~~~p~------------------------------~~~sg~~~~~~~~~------- 974 (1205)
T KOG0606|consen 932 PDSLLIAYDGHRPLTDFGTLSKVGLIPPT------------------------------TDLSGPSSSGTPRR------- 974 (1205)
T ss_pred ccchhhcccCCcccCccccccccccccCc------------------------------CCcccccccCcccc-------
Confidence 99999999999999999966443322111 011 0000000000
Q ss_pred CCCccccccccccccccccccccccchhhhhcccCCCC----ccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 228 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFP----MKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~----~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
+. . ..+....+ .+....+||+.|.+||.+.+...+..+|+|++|++++|
T Consensus 975 ----~~------~-----------------~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e 1027 (1205)
T KOG0606|consen 975 ----LS------R-----------------SERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFE 1027 (1205)
T ss_pred ----cc------c-----------------cccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhh
Confidence 00 0 00000000 01123589999999999999999999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCCCC-ccccccC-chHHHHHHHcCCCCCCCCCChH---HHHcCcccCCC
Q 004998 304 LFC---PFSTGEEKTRTMSSLRHRVLP-PQLLLKF-PKEASFCLWLLHPEPSGRPKMG---ELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~~~p-~~~~~~~-p~~~~li~~~L~~dP~~Rpta~---eiL~hp~~~~~ 367 (720)
.++ ||.... .......+..+..| +.-.... +...+++..+|..+|.+|..+. ++-.|+||+..
T Consensus 1028 ~l~g~pp~na~t-pq~~f~ni~~~~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~~~~e~k~~~~~~~~ 1098 (1205)
T KOG0606|consen 1028 VLTGIPPFNAET-PQQIFENILNRDIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAKGAAEVKGHPFFQDV 1098 (1205)
T ss_pred hhcCCCCCCCcc-hhhhhhccccCCCCCCCCccccChhhhhhhhhhhccCchhccCcccccccccCCccCCC
Confidence 999 444433 33555555554433 3222333 3344999999999999998766 88899999987
No 475
>KOG0284 consensus Polyadenylation factor I complex, subunit PFS2 [RNA processing and modification]
Probab=99.19 E-value=3.2e-11 Score=125.69 Aligned_cols=102 Identities=8% Similarity=0.019 Sum_probs=79.9
Q ss_pred hhhhhhccccceEEeeeec---cCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCC
Q 004998 581 EGLCKYLSFSKLRVKADLN---QGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRS 657 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~---~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 657 (720)
+.++++...++++++.... ...|.||.--|.||+|+|.--+||+||.|..||+||.+++. |-.....|++
T Consensus 193 skF~t~SdDg~ikiWdf~~~kee~vL~GHgwdVksvdWHP~kgLiasgskDnlVKlWDprSg~-------cl~tlh~HKn 265 (464)
T KOG0284|consen 193 SKFLTCSDDGTIKIWDFRMPKEERVLRGHGWDVKSVDWHPTKGLIASGSKDNLVKLWDPRSGS-------CLATLHGHKN 265 (464)
T ss_pred ceeEEecCCCeEEEEeccCCchhheeccCCCCcceeccCCccceeEEccCCceeEeecCCCcc-------hhhhhhhccc
Confidence 4467788888999999887 36789999999999999999999999999999999998862 1112223466
Q ss_pred CEEEEEEecCCCCEEEEEeCCCcEEEEECCCCc
Q 004998 658 KLSSICWNSYIKSQIASSNFEGVVQVGQVLHLI 690 (720)
Q Consensus 658 ~i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~ 690 (720)
.|..|.|+|++ ++|+|+|.|.+++|.|+++-+
T Consensus 266 tVl~~~f~~n~-N~Llt~skD~~~kv~DiR~mk 297 (464)
T KOG0284|consen 266 TVLAVKFNPNG-NWLLTGSKDQSCKVFDIRTMK 297 (464)
T ss_pred eEEEEEEcCCC-CeeEEccCCceEEEEehhHhH
Confidence 67777777754 777777777777777777443
No 476
>KOG0264 consensus Nucleosome remodeling factor, subunit CAF1/NURF55/MSI1 [Chromatin structure and dynamics]
Probab=99.18 E-value=8.4e-11 Score=124.39 Aligned_cols=99 Identities=13% Similarity=0.131 Sum_probs=79.5
Q ss_pred hhhhccccceEEeeee----c-cCCCCCCCCCeEEEEECCCCC-EEEEeeCCCcEEEeeCCcccccccccccceEEecCC
Q 004998 583 LCKYLSFSKLRVKADL----N-QGDLLNSSNLVCSLSFDRDGE-LFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASR 656 (720)
Q Consensus 583 l~~~~~~~~~~~~~~l----~-~~~~~~~~~~V~sv~f~~dg~-~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~ 656 (720)
++.....++|.++.+- + +.....|++.|+||+|+|-+. +|||||.||+|++||++.... ++.....|.
T Consensus 243 F~sv~dd~~L~iwD~R~~~~~~~~~~~ah~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~------~lh~~e~H~ 316 (422)
T KOG0264|consen 243 FGSVGDDGKLMIWDTRSNTSKPSHSVKAHSAEVNCVAFNPFNEFILATGSADKTVALWDLRNLNK------PLHTFEGHE 316 (422)
T ss_pred heeecCCCeEEEEEcCCCCCCCcccccccCCceeEEEeCCCCCceEEeccCCCcEEEeechhccc------CceeccCCC
Confidence 3455556666665544 2 356678899999999999766 599999999999999988731 233445668
Q ss_pred CCEEEEEEecCCCCEEEEEeCCCcEEEEECC
Q 004998 657 SKLSSICWNSYIKSQIASSNFEGVVQVGQVL 687 (720)
Q Consensus 657 ~~i~~v~~~~~~~~~laS~s~D~~v~lWDv~ 687 (720)
..|.+|.|||+...+|||++.|+.+.|||+.
T Consensus 317 dev~~V~WSPh~etvLASSg~D~rl~vWDls 347 (422)
T KOG0264|consen 317 DEVFQVEWSPHNETVLASSGTDRRLNVWDLS 347 (422)
T ss_pred cceEEEEeCCCCCceeEecccCCcEEEEecc
Confidence 8999999999999999999999999999985
No 477
>KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.18 E-value=1.3e-10 Score=123.86 Aligned_cols=121 Identities=17% Similarity=0.215 Sum_probs=101.4
Q ss_pred hhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCC-EEEEeeCCCcEEEeeCCcccccccccccceEEecCCCC
Q 004998 580 LEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGE-LFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSK 658 (720)
Q Consensus 580 ~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~-~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 658 (720)
.+...+||.-++.-|.++| .+|++.|.|.+|+|... +++|||-|++||+||.++.. .++.++.|..+
T Consensus 131 Dd~v~k~~d~s~a~v~~~l-----~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~-------~~v~elnhg~p 198 (487)
T KOG0310|consen 131 DDKVVKYWDLSTAYVQAEL-----SGHTDYVRCGDISPANDHIVVTGSYDGKVRLWDTRSLT-------SRVVELNHGCP 198 (487)
T ss_pred CCceEEEEEcCCcEEEEEe-----cCCcceeEeeccccCCCeEEEecCCCceEEEEEeccCC-------ceeEEecCCCc
Confidence 4456788888887775555 56799999999999765 89999999999999987652 47788999999
Q ss_pred EEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEE--------EEEEEEeecCCceEEEecCccc
Q 004998 659 LSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYF--------SALYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 659 i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~--------~~v~~v~~~~~~~~~~~~~~~~ 714 (720)
|..|++=| .+++||||+ ...|||||+.+|..+ ++|+|..++..+..+.+|++|-
T Consensus 199 Ve~vl~lp-sgs~iasAg-Gn~vkVWDl~~G~qll~~~~~H~KtVTcL~l~s~~~rLlS~sLD~ 260 (487)
T KOG0310|consen 199 VESVLALP-SGSLIASAG-GNSVKVWDLTTGGQLLTSMFNHNKTVTCLRLASDSTRLLSGSLDR 260 (487)
T ss_pred eeeEEEcC-CCCEEEEcC-CCeEEEEEecCCceehhhhhcccceEEEEEeecCCceEeeccccc
Confidence 99999999 457999998 579999999977543 3499999999999999999984
No 478
>KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.18 E-value=9.4e-11 Score=130.08 Aligned_cols=100 Identities=6% Similarity=0.066 Sum_probs=85.1
Q ss_pred CCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCCCcEEE
Q 004998 605 NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGVVQV 683 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~v~~~~~~~~~laS~s~D~~v~l 683 (720)
.|.-.|+||+.+|+.++|||||.||+.|||++.... -+..+ +|+-.|.||.|+|++ +.|||||.|+||||
T Consensus 461 aHdKdIN~Vaia~ndkLiAT~SqDktaKiW~le~~~--------l~~vLsGH~RGvw~V~Fs~~d-q~laT~SgD~TvKI 531 (775)
T KOG0319|consen 461 AHDKDINCVAIAPNDKLIATGSQDKTAKIWDLEQLR--------LLGVLSGHTRGVWCVSFSKND-QLLATCSGDKTVKI 531 (775)
T ss_pred hhcccccceEecCCCceEEecccccceeeecccCce--------EEEEeeCCccceEEEEecccc-ceeEeccCCceEEE
Confidence 457889999999999999999999999999987431 22333 457789999999975 59999999999999
Q ss_pred EECCCCcEEEE-------EEEEeecCCceEEEecCcc
Q 004998 684 GQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 684 WDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~ 713 (720)
|.+.+..|++| |..+.|-..+..+.|+--|
T Consensus 532 W~is~fSClkT~eGH~~aVlra~F~~~~~qliS~~ad 568 (775)
T KOG0319|consen 532 WSISTFSCLKTFEGHTSAVLRASFIRNGKQLISAGAD 568 (775)
T ss_pred EEeccceeeeeecCccceeEeeeeeeCCcEEEeccCC
Confidence 99999999998 7888998888888876555
No 479
>KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.17 E-value=1.6e-10 Score=123.11 Aligned_cols=106 Identities=11% Similarity=0.109 Sum_probs=87.5
Q ss_pred CCCCCCCeEEEEECCCC-CEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCCCc
Q 004998 603 LLNSSNLVCSLSFDRDG-ELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGV 680 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg-~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~v~~~~~~~~~laS~s~D~~ 680 (720)
+..|...|..+.|+|++ ++|++||.|+.+++||+.+. +-..++ +|++-|.|.+|+|-..++++||||||+
T Consensus 106 ~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a--------~v~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~ 177 (487)
T KOG0310|consen 106 LYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTA--------YVQAELSGHTDYVRCGDISPANDHIVVTGSYDGK 177 (487)
T ss_pred HhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCc--------EEEEEecCCcceeEeeccccCCCeEEEecCCCce
Confidence 45679999999999855 67999999999999998876 223344 458889999999988889999999999
Q ss_pred EEEEECCCC-cEEEE------EEEEeecCCceEEEecCccceE
Q 004998 681 VQVGQVLHL-IYFSA------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 681 v~lWDv~tg-~~~~~------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
||+||.++- ..+.+ |.+|.|=|.|+.|++..=-+||
T Consensus 178 vrl~DtR~~~~~v~elnhg~pVe~vl~lpsgs~iasAgGn~vk 220 (487)
T KOG0310|consen 178 VRLWDTRSLTSRVVELNHGCPVESVLALPSGSLIASAGGNSVK 220 (487)
T ss_pred EEEEEeccCCceeEEecCCCceeeEEEcCCCCEEEEcCCCeEE
Confidence 999999977 56666 8889998888888876555554
No 480
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.17 E-value=4.3e-11 Score=120.57 Aligned_cols=98 Identities=16% Similarity=0.227 Sum_probs=80.2
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++..+.|++|..... ++.+.. ..+++||| .|++|.+++.... . ....++.+|+.+|.++|+.|
T Consensus 45 ~~~~E~~~l~~l~~~~i~~p~~-~~~~~~---~~~lv~e~~~G~~L~~~~~~~~----~-~~~~i~~~i~~~l~~lH~~~ 115 (211)
T PRK14879 45 RTRREARIMSRARKAGVNVPAV-YFVDPE---NFIIVMEYIEGEPLKDLINSNG----M-EELELSREIGRLVGKLHSAG 115 (211)
T ss_pred HHHHHHHHHHHHHHCCCCCCeE-EEEeCC---CCEEEEEEeCCcCHHHHHHhcc----H-HHHHHHHHHHHHHHHHHhCC
Confidence 3447778889999999866555 332322 35899999 8999999985422 2 88899999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccC
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSD 170 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~ 170 (720)
++|+|++|.|||++ ++.++++|||.+..
T Consensus 116 i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 116 IIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred cccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 99999999999998 78999999998843
No 481
>KOG0277 consensus Peroxisomal targeting signal type 2 receptor [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.16 E-value=2.9e-11 Score=119.17 Aligned_cols=109 Identities=10% Similarity=0.148 Sum_probs=88.9
Q ss_pred CCCCCCCeEEEEECCCC-CEEEEeeCCCcEEEeeCCcccccccccccceEEecC-CCCEEEEEEecCCCCEEEEEeCCCc
Q 004998 603 LLNSSNLVCSLSFDRDG-ELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS-RSKLSSICWNSYIKSQIASSNFEGV 680 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg-~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~i~~v~~~~~~~~~laS~s~D~~ 680 (720)
+..|+..+.|+.|+... .++||||+|+.||+||++... .|+.++.+ .-.|..|.|||++.++|||||||.|
T Consensus 186 i~ah~~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~~r-------~pl~eL~gh~~AVRkvk~Sph~~~lLaSasYDmT 258 (311)
T KOG0277|consen 186 IEAHNSEILCCDWSKYNHNVLATGGVDNLVRGWDIRNLR-------TPLFELNGHGLAVRKVKFSPHHASLLASASYDMT 258 (311)
T ss_pred EEeccceeEeecccccCCcEEEecCCCceEEEEehhhcc-------ccceeecCCceEEEEEecCcchhhHhhhccccce
Confidence 45568899999999865 579999999999999998762 47777644 5679999999999999999999999
Q ss_pred EEEEECCCCcEEEE--------EEEEeecCC-ceEEEecCccceEEc
Q 004998 681 VQVGQVLHLIYFSA--------LYCIVLNKL-LIIFRYGMFQEVKYL 718 (720)
Q Consensus 681 v~lWDv~tg~~~~~--------v~~v~~~~~-~~~~~~~~~~~~~~~ 718 (720)
+||||...+....+ |..++||.. ..++++...||..|.
T Consensus 259 ~riw~~~~~ds~~e~~~~HtEFv~g~Dws~~~~~~vAs~gWDe~l~V 305 (311)
T KOG0277|consen 259 VRIWDPERQDSAIETVDHHTEFVCGLDWSLFDPGQVASTGWDELLYV 305 (311)
T ss_pred EEecccccchhhhhhhhccceEEeccccccccCceeeecccccceee
Confidence 99999986654332 667788765 457888888887764
No 482
>KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only]
Probab=99.15 E-value=2.3e-10 Score=112.67 Aligned_cols=85 Identities=7% Similarity=0.100 Sum_probs=71.6
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEE
Q 004998 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQ 682 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~v~ 682 (720)
+..|.+.+..|-||||++||||+|.|+++|||+....+. ..++.-+|...+..++||.+ +.+|++|+.|+++|
T Consensus 211 ~~ah~~~il~C~lSPd~k~lat~ssdktv~iwn~~~~~k------le~~l~gh~rWvWdc~FS~d-g~YlvTassd~~~r 283 (311)
T KOG0315|consen 211 FQAHNGHILRCLLSPDVKYLATCSSDKTVKIWNTDDFFK------LELVLTGHQRWVWDCAFSAD-GEYLVTASSDHTAR 283 (311)
T ss_pred eecccceEEEEEECCCCcEEEeecCCceEEEEecCCcee------eEEEeecCCceEEeeeeccC-ccEEEecCCCCcee
Confidence 445689999999999999999999999999999876521 22333455778999999995 56999999999999
Q ss_pred EEECCCCcEEEE
Q 004998 683 VGQVLHLIYFSA 694 (720)
Q Consensus 683 lWDv~tg~~~~~ 694 (720)
+||+..|+.++.
T Consensus 284 lW~~~~~k~v~q 295 (311)
T KOG0315|consen 284 LWDLSAGKEVRQ 295 (311)
T ss_pred ecccccCceeee
Confidence 999999998875
No 483
>KOG0305 consensus Anaphase promoting complex, Cdc20, Cdh1, and Ama1 subunits [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=99.14 E-value=1.5e-10 Score=127.31 Aligned_cols=84 Identities=13% Similarity=0.266 Sum_probs=74.2
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccce-EEecCCCCEEEEEEecCCCCEEEEEe--CCC
Q 004998 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPV-VEMASRSKLSSICWNSYIKSQIASSN--FEG 679 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~-~~~~~~~~i~~v~~~~~~~~~laS~s--~D~ 679 (720)
+.+|...|+.++|++|+.+||+||.|.++.|||.... .|+ ....|++.|..++|+|...++||||+ .|+
T Consensus 297 ~~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~~~~--------~p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~ 368 (484)
T KOG0305|consen 297 LQGHRQEVCGLKWSPDGNQLASGGNDNVVFIWDGLSP--------EPKFTFTEHTAAVKALAWCPWQSGLLATGGGSADR 368 (484)
T ss_pred hhcccceeeeeEECCCCCeeccCCCccceEeccCCCc--------cccEEEeccceeeeEeeeCCCccCceEEcCCCccc
Confidence 7789999999999999999999999999999997433 244 34467889999999999999999987 699
Q ss_pred cEEEEECCCCcEEEE
Q 004998 680 VVQVGQVLHLIYFSA 694 (720)
Q Consensus 680 ~v~lWDv~tg~~~~~ 694 (720)
+|++||+.+|+.+..
T Consensus 369 ~i~fwn~~~g~~i~~ 383 (484)
T KOG0305|consen 369 CIKFWNTNTGARIDS 383 (484)
T ss_pred EEEEEEcCCCcEecc
Confidence 999999999998875
No 484
>smart00090 RIO RIO-like kinase.
Probab=99.14 E-value=4.5e-11 Score=122.92 Aligned_cols=102 Identities=13% Similarity=0.049 Sum_probs=77.4
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-c
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG-I 142 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g-I 142 (720)
++|..++.++.+. ++.+.. .+... ..++|||| .|.+|..++... ..+...++..++.||+.+|.+||++| |
T Consensus 98 ~~E~~~L~~L~~~-~i~~p~-~~~~~----~~~lV~E~~~g~~L~~~~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~g~i 170 (237)
T smart00090 98 EKEFRNLQRLYEA-GVPVPK-PIAWR----RNVLVMEFIGGDGLPAPRLKD-VEPEEEEEFELYDDILEEMRKLYKEGEL 170 (237)
T ss_pred HHHHHHHHHHHhc-CCCCCe-eeEec----CceEEEEEecCCccccccccc-CCcchHHHHHHHHHHHHHHHHHHhcCCE
Confidence 4677788888753 333222 12122 23799999 777887665222 23667778899999999999999999 9
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCC
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSD 174 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~ 174 (720)
+||||||+||+++ ++.++++|||.+...+.+
T Consensus 171 iH~Dikp~NIli~-~~~i~LiDFg~a~~~~~~ 201 (237)
T smart00090 171 VHGDLSEYNILVH-DGKVVIIDVSQSVELDHP 201 (237)
T ss_pred EeCCCChhhEEEE-CCCEEEEEChhhhccCCc
Confidence 9999999999998 889999999999765554
No 485
>KOG0277 consensus Peroxisomal targeting signal type 2 receptor [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.13 E-value=2.2e-10 Score=113.06 Aligned_cols=118 Identities=10% Similarity=0.147 Sum_probs=91.7
Q ss_pred cceEEeeeec-c--CCCCCCCCCeEEEEECC-CCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEe
Q 004998 590 SKLRVKADLN-Q--GDLLNSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWN 665 (720)
Q Consensus 590 ~~~~~~~~l~-~--~~~~~~~~~V~sv~f~~-dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~ 665 (720)
.++|+++..+ . ..+.||.+.|...+|+| .+.+||++|.|++++|||++..- .+.....|...|.|+-||
T Consensus 127 ~TiKLW~~~r~~Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~g-------k~~~i~ah~~Eil~cdw~ 199 (311)
T KOG0277|consen 127 GTIKLWDPNRPNSVQTFNGHNSCIYQAAFSPHIPNLFASASGDGTLRLWDVRSPG-------KFMSIEAHNSEILCCDWS 199 (311)
T ss_pred CceEeecCCCCcceEeecCCccEEEEEecCCCCCCeEEEccCCceEEEEEecCCC-------ceeEEEeccceeEeeccc
Confidence 4566666655 2 34778999999999998 66799999999999999986541 234433456789999999
Q ss_pred cCCCCEEEEEeCCCcEEEEECCCCc-EEEE-------EEEEeecCCc-eEEEecCccc
Q 004998 666 SYIKSQIASSNFEGVVQVGQVLHLI-YFSA-------LYCIVLNKLL-IIFRYGMFQE 714 (720)
Q Consensus 666 ~~~~~~laS~s~D~~v~lWDv~tg~-~~~~-------v~~v~~~~~~-~~~~~~~~~~ 714 (720)
.|+.++||+|+-|+.||+||++.-+ .+.+ |..|.|||-- +++++.|+|=
T Consensus 200 ky~~~vl~Tg~vd~~vr~wDir~~r~pl~eL~gh~~AVRkvk~Sph~~~lLaSasYDm 257 (311)
T KOG0277|consen 200 KYNHNVLATGGVDNLVRGWDIRNLRTPLFELNGHGLAVRKVKFSPHHASLLASASYDM 257 (311)
T ss_pred ccCCcEEEecCCCceEEEEehhhccccceeecCCceEEEEEecCcchhhHhhhccccc
Confidence 9999999999999999999997533 3433 8889998864 5667777763
No 486
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.13 E-value=7e-11 Score=136.19 Aligned_cols=94 Identities=18% Similarity=0.225 Sum_probs=78.9
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
|..+|..++..++|++|+..+. +..... ..++|||| .|++|.+++. ....++.||+.+|.+||+.|
T Consensus 382 ~~~~E~~~l~~l~~~~i~~p~~-~~~~~~---~~~lv~E~~~g~~L~~~l~---------~~~~~~~~i~~~L~~lH~~g 448 (535)
T PRK09605 382 RTRAEARLLSEARRAGVPTPVI-YDVDPE---EKTIVMEYIGGKDLKDVLE---------GNPELVRKVGEIVAKLHKAG 448 (535)
T ss_pred HHHHHHHHHHhhcccCCCeeEE-EEEeCC---CCEEEEEecCCCcHHHHHH---------HHHHHHHHHHHHHHHHHhCC
Confidence 3447888999999999987655 232322 35899999 9999999884 45789999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccC
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSD 170 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~ 170 (720)
|+||||||+|||+ .++.++++|||+++.
T Consensus 449 iiHrDlkp~NILl-~~~~~~liDFGla~~ 476 (535)
T PRK09605 449 IVHGDLTTSNFIV-RDDRLYLIDFGLGKY 476 (535)
T ss_pred CccCCCChHHEEE-ECCcEEEEeCccccc
Confidence 9999999999999 678999999999854
No 487
>KOG0973 consensus Histone transcription regulator HIRA, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.13 E-value=2e-10 Score=132.69 Aligned_cols=112 Identities=13% Similarity=0.193 Sum_probs=90.7
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCc-----cccc-----ccccccce-EEecCCCCEEEEEEecCCCCE
Q 004998 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDA-----IINE-----NRDIHYPV-VEMASRSKLSSICWNSYIKSQ 671 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~-----~~~~-----~~~~~~~~-~~~~~~~~i~~v~~~~~~~~~ 671 (720)
...|.+-|+||.|+|||+|||+||.|+-|.||+... ..+. .+.-...+ ....|.+.|..|+|+|+ ..+
T Consensus 65 m~~h~~sv~CVR~S~dG~~lAsGSDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~-~~~ 143 (942)
T KOG0973|consen 65 MDDHDGSVNCVRFSPDGSYLASGSDDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPD-DSL 143 (942)
T ss_pred eccccCceeEEEECCCCCeEeeccCcceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCC-ccE
Confidence 344589999999999999999999999999999873 1111 01111122 23457889999999995 569
Q ss_pred EEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccce
Q 004998 672 IASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 672 laS~s~D~~v~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
|||+|.|++|-|||..|..++.. |-.|.|.|.|.++++-+.|.-
T Consensus 144 lvS~s~DnsViiwn~~tF~~~~vl~~H~s~VKGvs~DP~Gky~ASqsdDrt 194 (942)
T KOG0973|consen 144 LVSVSLDNSVIIWNAKTFELLKVLRGHQSLVKGVSWDPIGKYFASQSDDRT 194 (942)
T ss_pred EEEecccceEEEEccccceeeeeeecccccccceEECCccCeeeeecCCce
Confidence 99999999999999999987776 789999999999999999863
No 488
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.12 E-value=5.3e-10 Score=135.06 Aligned_cols=104 Identities=9% Similarity=0.088 Sum_probs=85.8
Q ss_pred CCCCCCCeEEEEECC-CCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcE
Q 004998 603 LLNSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVV 681 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~-dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~v 681 (720)
+.+|...|.+|+|+| ++.+|||||.|++|+|||+.+. .++..+.++..|.++.|++..+.+||+|+.||+|
T Consensus 571 ~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~--------~~~~~~~~~~~v~~v~~~~~~g~~latgs~dg~I 642 (793)
T PLN00181 571 MKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQG--------VSIGTIKTKANICCVQFPSESGRSLAFGSADHKV 642 (793)
T ss_pred ecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCC--------cEEEEEecCCCeEEEEEeCCCCCEEEEEeCCCeE
Confidence 456789999999996 8899999999999999998765 2344455567899999987778899999999999
Q ss_pred EEEECCCCc-EEEE-------EEEEeecCCceEEEecCccce
Q 004998 682 QVGQVLHLI-YFSA-------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 682 ~lWDv~tg~-~~~~-------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
++||+++++ .+.+ |.++.|. .+..+++|+.|..
T Consensus 643 ~iwD~~~~~~~~~~~~~h~~~V~~v~f~-~~~~lvs~s~D~~ 683 (793)
T PLN00181 643 YYYDLRNPKLPLCTMIGHSKTVSYVRFV-DSSTLVSSSTDNT 683 (793)
T ss_pred EEEECCCCCccceEecCCCCCEEEEEEe-CCCEEEEEECCCE
Confidence 999998765 3332 8999997 5678888988864
No 489
>KOG0278 consensus Serine/threonine kinase receptor-associated protein [Lipid transport and metabolism]
Probab=99.12 E-value=6.3e-11 Score=116.47 Aligned_cols=95 Identities=16% Similarity=0.218 Sum_probs=79.6
Q ss_pred CCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCEEEEEEecCCCCEEEEEeCCCcEEE
Q 004998 605 NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFEGVVQV 683 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~v~~~~~~~~~laS~s~D~~v~l 683 (720)
.|.++|.+|+|+.|.++|.|||.+|-+||||++... .|..++. |.+.|..+-|-.-+ +.|.|+++|++||+
T Consensus 98 ~hkhivk~~af~~ds~~lltgg~ekllrvfdln~p~-------App~E~~ghtg~Ir~v~wc~eD-~~iLSSadd~tVRL 169 (334)
T KOG0278|consen 98 EHKHIVKAVAFSQDSNYLLTGGQEKLLRVFDLNRPK-------APPKEISGHTGGIRTVLWCHED-KCILSSADDKTVRL 169 (334)
T ss_pred hhhheeeeEEecccchhhhccchHHHhhhhhccCCC-------CCchhhcCCCCcceeEEEeccC-ceEEeeccCCceEE
Confidence 458999999999999999999999999999987763 3555554 47889999998744 57888899999999
Q ss_pred EECCCCcEEEE------EEEEeecCCceEE
Q 004998 684 GQVLHLIYFSA------LYCIVLNKLLIIF 707 (720)
Q Consensus 684 WDv~tg~~~~~------v~~v~~~~~~~~~ 707 (720)
||.+||+.+++ |.+.-.++.|-++
T Consensus 170 WD~rTgt~v~sL~~~s~VtSlEvs~dG~il 199 (334)
T KOG0278|consen 170 WDHRTGTEVQSLEFNSPVTSLEVSQDGRIL 199 (334)
T ss_pred EEeccCcEEEEEecCCCCcceeeccCCCEE
Confidence 99999999887 6677777776554
No 490
>KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics]
Probab=99.11 E-value=4.6e-10 Score=119.07 Aligned_cols=123 Identities=15% Similarity=0.227 Sum_probs=103.8
Q ss_pred cchhhhhhhhccccceEEeeeec---cCCCCCCCCCeEEEEECCCC---------CEEEEeeCCCcEEEeeCCccccccc
Q 004998 577 NPFLEGLCKYLSFSKLRVKADLN---QGDLLNSSNLVCSLSFDRDG---------ELFAAAGVNKKIKVFECDAIINENR 644 (720)
Q Consensus 577 ~~~~~~l~~~~~~~~~~~~~~l~---~~~~~~~~~~V~sv~f~~dg---------~~lat~~~d~~i~iwd~~~~~~~~~ 644 (720)
++-...|.......+||++..-. -.||..|+-.|.++.|+|+| ..+|+++.|.+|++||...+.
T Consensus 368 n~tg~LLaS~SdD~TlkiWs~~~~~~~~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv---- 443 (524)
T KOG0273|consen 368 NPTGSLLASCSDDGTLKIWSMGQSNSVHDLQAHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVESGV---- 443 (524)
T ss_pred CCCCceEEEecCCCeeEeeecCCCcchhhhhhhccceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEccCCc----
Confidence 33345678888899999998555 36899999999999999876 368999999999999987773
Q ss_pred ccccce-EEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE------EEEEeecCCceEEE
Q 004998 645 DIHYPV-VEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA------LYCIVLNKLLIIFR 708 (720)
Q Consensus 645 ~~~~~~-~~~~~~~~i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~------v~~v~~~~~~~~~~ 708 (720)
|+ ..|.|+.+|++|+|+|+ +.+||||+.||.|.+|+..+|+.+++ |+.+.||..|..+.
T Consensus 444 ----~i~~f~kH~~pVysvafS~~-g~ylAsGs~dg~V~iws~~~~~l~~s~~~~~~Ifel~Wn~~G~kl~ 509 (524)
T KOG0273|consen 444 ----PIHTLMKHQEPVYSVAFSPN-GRYLASGSLDGCVHIWSTKTGKLVKSYQGTGGIFELCWNAAGDKLG 509 (524)
T ss_pred ----eeEeeccCCCceEEEEecCC-CcEEEecCCCCeeEeccccchheeEeecCCCeEEEEEEcCCCCEEE
Confidence 45 45688999999999996 56999999999999999999999987 78999998886654
No 491
>KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only]
Probab=99.10 E-value=4e-10 Score=110.93 Aligned_cols=98 Identities=9% Similarity=0.145 Sum_probs=80.5
Q ss_pred CCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcE
Q 004998 602 DLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVV 681 (720)
Q Consensus 602 ~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~v 681 (720)
.+.+|+.-|.+|.|..||+...|||.|+++||||++.. ..-..+.+.+.|++|+.+|+. ..|.||+.+|-|
T Consensus 78 t~e~h~kNVtaVgF~~dgrWMyTgseDgt~kIWdlR~~--------~~qR~~~~~spVn~vvlhpnQ-teLis~dqsg~i 148 (311)
T KOG0315|consen 78 TFEGHTKNVTAVGFQCDGRWMYTGSEDGTVKIWDLRSL--------SCQRNYQHNSPVNTVVLHPNQ-TELISGDQSGNI 148 (311)
T ss_pred EEeccCCceEEEEEeecCeEEEecCCCceEEEEeccCc--------ccchhccCCCCcceEEecCCc-ceEEeecCCCcE
Confidence 35677888999999999999999999999999999875 123456678999999999965 479999999999
Q ss_pred EEEECCCCcEEEE--------EEEEeecCCceEEE
Q 004998 682 QVGQVLHLIYFSA--------LYCIVLNKLLIIFR 708 (720)
Q Consensus 682 ~lWDv~tg~~~~~--------v~~v~~~~~~~~~~ 708 (720)
+|||+.+..|..+ |.+++..++|+...
T Consensus 149 rvWDl~~~~c~~~liPe~~~~i~sl~v~~dgsml~ 183 (311)
T KOG0315|consen 149 RVWDLGENSCTHELIPEDDTSIQSLTVMPDGSMLA 183 (311)
T ss_pred EEEEccCCccccccCCCCCcceeeEEEcCCCcEEE
Confidence 9999998876554 66776666665543
No 492
>KOG0772 consensus Uncharacterized conserved protein, contains WD40 repeat [Function unknown]
Probab=99.10 E-value=1.5e-10 Score=123.75 Aligned_cols=112 Identities=17% Similarity=0.380 Sum_probs=83.2
Q ss_pred CCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCccccc--------ccc------cccce-----------------
Q 004998 602 DLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINE--------NRD------IHYPV----------------- 650 (720)
Q Consensus 602 ~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~--------~~~------~~~~~----------------- 650 (720)
.|.||+-+|++++++|.|..|+|||.|-+|+.|||+-.... +.+ +.|++
T Consensus 162 ~l~hgtk~Vsal~~Dp~GaR~~sGs~Dy~v~~wDf~gMdas~~~fr~l~P~E~h~i~sl~ys~Tg~~iLvvsg~aqakl~ 241 (641)
T KOG0772|consen 162 QLKHGTKIVSALAVDPSGARFVSGSLDYTVKFWDFQGMDASMRSFRQLQPCETHQINSLQYSVTGDQILVVSGSAQAKLL 241 (641)
T ss_pred eccCCceEEEEeeecCCCceeeeccccceEEEEecccccccchhhhccCcccccccceeeecCCCCeEEEEecCcceeEE
Confidence 45678999999999999999999999999999998741000 000 00111
Q ss_pred -------E----------Ee----cCCCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCc----EEEE---------EE
Q 004998 651 -------V----------EM----ASRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLI----YFSA---------LY 696 (720)
Q Consensus 651 -------~----------~~----~~~~~i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~----~~~~---------v~ 696 (720)
. .| +|...|+|.||+|..++.+.|+++|||+|||||..-+ .+.+ +.
T Consensus 242 DRdG~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~g~Rv~~t 321 (641)
T KOG0772|consen 242 DRDGFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAGGKRVPVT 321 (641)
T ss_pred ccCCceeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeEEeeccCCCcccCce
Confidence 0 11 2344579999999999999999999999999997443 3333 78
Q ss_pred EEeecCCceEEEecCcc
Q 004998 697 CIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 697 ~v~~~~~~~~~~~~~~~ 713 (720)
+++||+.+..|+.|-.|
T Consensus 322 sC~~nrdg~~iAagc~D 338 (641)
T KOG0772|consen 322 SCAWNRDGKLIAAGCLD 338 (641)
T ss_pred eeecCCCcchhhhcccC
Confidence 99999999988765443
No 493
>KOG0264 consensus Nucleosome remodeling factor, subunit CAF1/NURF55/MSI1 [Chromatin structure and dynamics]
Probab=99.09 E-value=2.6e-10 Score=120.75 Aligned_cols=107 Identities=10% Similarity=0.181 Sum_probs=83.4
Q ss_pred CCCCCCCCCeEEEEECCCC-CEEEEeeCCCcEEEeeCCcccccccccccce-EEecCCCCEEEEEEecCCCCEEEEEeCC
Q 004998 601 GDLLNSSNLVCSLSFDRDG-ELFAAAGVNKKIKVFECDAIINENRDIHYPV-VEMASRSKLSSICWNSYIKSQIASSNFE 678 (720)
Q Consensus 601 ~~~~~~~~~V~sv~f~~dg-~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~-~~~~~~~~i~~v~~~~~~~~~laS~s~D 678 (720)
..+.+|...|..|+|++-. .+|+++|.|+++.|||.++... .|. ..-.|.+.|.||+|||++..+|||||.|
T Consensus 221 ~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~~------~~~~~~~ah~~~vn~~~fnp~~~~ilAT~S~D 294 (422)
T KOG0264|consen 221 TIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNTS------KPSHSVKAHSAEVNCVAFNPFNEFILATGSAD 294 (422)
T ss_pred EEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCCCC------CCcccccccCCceeEEEeCCCCCceEEeccCC
Confidence 3466789999999999855 6899999999999999986211 122 2234588999999999999999999999
Q ss_pred CcEEEEECCCC-cEEEE-------EEEEeecCCce-EEEecCcc
Q 004998 679 GVVQVGQVLHL-IYFSA-------LYCIVLNKLLI-IFRYGMFQ 713 (720)
Q Consensus 679 ~~v~lWDv~tg-~~~~~-------v~~v~~~~~~~-~~~~~~~~ 713 (720)
++|+|||+|.- +++.+ |++|-|+|-.- ++++..+|
T Consensus 295 ~tV~LwDlRnL~~~lh~~e~H~dev~~V~WSPh~etvLASSg~D 338 (422)
T KOG0264|consen 295 KTVALWDLRNLNKPLHTFEGHEDEVFQVEWSPHNETVLASSGTD 338 (422)
T ss_pred CcEEEeechhcccCceeccCCCcceEEEEeCCCCCceeEecccC
Confidence 99999999843 34544 99999998654 34444444
No 494
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.09 E-value=1.1e-10 Score=116.40 Aligned_cols=95 Identities=14% Similarity=0.181 Sum_probs=74.4
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
|..+|..++..+.|+++..... ++.... ..+++||| .|++|.+++..... .++.||+.+|.+||+.|
T Consensus 43 ~~~~E~~~l~~l~~~~i~~p~~-~~~~~~---~~~lv~e~~~g~~l~~~~~~~~~--------~~~~~i~~~l~~lH~~g 110 (199)
T TIGR03724 43 RTRNEARLLSRARKAGVNTPVV-YDVDPD---NKTIVMEYIEGKPLKDVIEEGND--------ELLREIGRLVGKLHKAG 110 (199)
T ss_pred HHHHHHHHHHHHHHCCCCCCEE-EEEECC---CCEEEEEEECCccHHHHHhhcHH--------HHHHHHHHHHHHHHHCC
Confidence 3447888888888887543332 122222 35899999 99999998843221 78999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccC
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSD 170 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~ 170 (720)
++|+|++|.||+++ ++.++++|||.+..
T Consensus 111 i~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 111 IVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred eecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 99999999999998 89999999998743
No 495
>KOG0282 consensus mRNA splicing factor [Function unknown]
Probab=99.08 E-value=8.8e-11 Score=124.89 Aligned_cols=126 Identities=10% Similarity=0.089 Sum_probs=104.0
Q ss_pred ccchhhhhhhhcc-ccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec
Q 004998 576 INPFLEGLCKYLS-FSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA 654 (720)
Q Consensus 576 ~~~~~~~l~~~~~-~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~ 654 (720)
|..+.+++.++|. |..-+.+ .++.||+-.|.+++|+.+|..|.|||.|+.||+||.+++ ..+..+.
T Consensus 231 LS~gmD~~vklW~vy~~~~~l-----rtf~gH~k~Vrd~~~s~~g~~fLS~sfD~~lKlwDtETG--------~~~~~f~ 297 (503)
T KOG0282|consen 231 LSGGMDGLVKLWNVYDDRRCL-----RTFKGHRKPVRDASFNNCGTSFLSASFDRFLKLWDTETG--------QVLSRFH 297 (503)
T ss_pred EecCCCceEEEEEEecCccee-----hhhhcchhhhhhhhccccCCeeeeeecceeeeeeccccc--------eEEEEEe
Confidence 5566666666655 2222222 346788999999999999999999999999999999998 3455666
Q ss_pred CCCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccc
Q 004998 655 SRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 655 ~~~~i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~ 714 (720)
....+.||.|.|++.+.+.+|..|+.|+.||+++|+.+++ |..|.|=+.+..+++.|=|.
T Consensus 298 ~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvqeYd~hLg~i~~i~F~~~g~rFissSDdk 364 (503)
T KOG0282|consen 298 LDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQEYDRHLGAILDITFVDEGRRFISSSDDK 364 (503)
T ss_pred cCCCceeeecCCCCCcEEEEecCCCcEEEEeccchHHHHHHHhhhhheeeeEEccCCceEeeeccCc
Confidence 6677899999998878999999999999999999998776 89999999999999887665
No 496
>KOG0640 consensus mRNA cleavage stimulating factor complex; subunit 1 [RNA processing and modification]
Probab=99.08 E-value=3.6e-10 Score=114.15 Aligned_cols=110 Identities=10% Similarity=0.116 Sum_probs=92.3
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEE
Q 004998 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQ 682 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~v~ 682 (720)
|-.|...|++++|+|-..+|++|+.|++||+||+.... ++.....++....|.|++|.| .+.+|+.|-.-.+++
T Consensus 168 lYDH~devn~l~FHPre~ILiS~srD~tvKlFDfsK~s-----aKrA~K~~qd~~~vrsiSfHP-sGefllvgTdHp~~r 241 (430)
T KOG0640|consen 168 LYDHVDEVNDLDFHPRETILISGSRDNTVKLFDFSKTS-----AKRAFKVFQDTEPVRSISFHP-SGEFLLVGTDHPTLR 241 (430)
T ss_pred hhhccCcccceeecchhheEEeccCCCeEEEEecccHH-----HHHHHHHhhccceeeeEeecC-CCceEEEecCCCcee
Confidence 45679999999999999999999999999999997641 112223344456799999999 667999998889999
Q ss_pred EEECCCCcEEEE----------EEEEeecCCceEEEecCccceEEc
Q 004998 683 VGQVLHLIYFSA----------LYCIVLNKLLIIFRYGMFQEVKYL 718 (720)
Q Consensus 683 lWDv~tg~~~~~----------v~~v~~~~~~~~~~~~~~~~~~~~ 718 (720)
|+||+|-||... |.||.+|+.++++++||.|-...|
T Consensus 242 lYdv~T~QcfvsanPd~qht~ai~~V~Ys~t~~lYvTaSkDG~Ikl 287 (430)
T KOG0640|consen 242 LYDVNTYQCFVSANPDDQHTGAITQVRYSSTGSLYVTASKDGAIKL 287 (430)
T ss_pred EEeccceeEeeecCcccccccceeEEEecCCccEEEEeccCCcEEe
Confidence 999999999875 999999999999999999865443
No 497
>KOG0643 consensus Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1) [Translation, ribosomal structure and biogenesis; Signal transduction mechanisms]
Probab=99.07 E-value=1.1e-09 Score=109.01 Aligned_cols=134 Identities=15% Similarity=0.165 Sum_probs=110.3
Q ss_pred hhhhhhccccceEEeeeec---cCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccc--------------
Q 004998 581 EGLCKYLSFSKLRVKADLN---QGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINEN-------------- 643 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~---~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~-------------- 643 (720)
+.|-.+...++..|+-.+. -|.+.||++.|.||+.+.+.+++.||+.|.++|+||+.++....
T Consensus 23 DLlFscaKD~~~~vw~s~nGerlGty~GHtGavW~~Did~~s~~liTGSAD~t~kLWDv~tGk~la~~k~~~~Vk~~~F~ 102 (327)
T KOG0643|consen 23 DLLFSCAKDSTPTVWYSLNGERLGTYDGHTGAVWCCDIDWDSKHLITGSADQTAKLWDVETGKQLATWKTNSPVKRVDFS 102 (327)
T ss_pred cEEEEecCCCCceEEEecCCceeeeecCCCceEEEEEecCCcceeeeccccceeEEEEcCCCcEEEEeecCCeeEEEeec
Confidence 4467788899999999988 38999999999999999999999999999999999987731100
Q ss_pred -------------------------------cccccceEEecC-CCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcE
Q 004998 644 -------------------------------RDIHYPVVEMAS-RSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIY 691 (720)
Q Consensus 644 -------------------------------~~~~~~~~~~~~-~~~i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~ 691 (720)
.+...|+..+.+ .++++..-|+|- +..|++|..||.|..||+++|+.
T Consensus 103 ~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~Wg~l-~~~ii~Ghe~G~is~~da~~g~~ 181 (327)
T KOG0643|consen 103 FGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSALWGPL-GETIIAGHEDGSISIYDARTGKE 181 (327)
T ss_pred cCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccceeeeeeccc-CCEEEEecCCCcEEEEEcccCce
Confidence 012234544433 788999999995 46999999999999999999966
Q ss_pred EEE--------EEEEeecCCceEEEecCccce
Q 004998 692 FSA--------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 692 ~~~--------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
+.. ++.+.|+++..++.+||=|.-
T Consensus 182 ~v~s~~~h~~~Ind~q~s~d~T~FiT~s~Dtt 213 (327)
T KOG0643|consen 182 LVDSDEEHSSKINDLQFSRDRTYFITGSKDTT 213 (327)
T ss_pred eeechhhhccccccccccCCcceEEecccCcc
Confidence 543 899999999999999998754
No 498
>KOG1407 consensus WD40 repeat protein [Function unknown]
Probab=99.06 E-value=6.9e-10 Score=110.06 Aligned_cols=113 Identities=13% Similarity=0.246 Sum_probs=92.2
Q ss_pred hhhccccceEEeeeec-cCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCEEE
Q 004998 584 CKYLSFSKLRVKADLN-QGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSS 661 (720)
Q Consensus 584 ~~~~~~~~~~~~~~l~-~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~ 661 (720)
.....|-.||++.+++ | ..---||+|+|+|+|||+||.|-.+-+||+...+ ++..++ ..-+|..
T Consensus 171 v~ILsypsLkpv~si~AH------~snCicI~f~p~GryfA~GsADAlvSLWD~~ELi--------C~R~isRldwpVRT 236 (313)
T KOG1407|consen 171 VEILSYPSLKPVQSIKAH------PSNCICIEFDPDGRYFATGSADALVSLWDVDELI--------CERCISRLDWPVRT 236 (313)
T ss_pred EEEEeccccccccccccC------CcceEEEEECCCCceEeeccccceeeccChhHhh--------hheeeccccCceEE
Confidence 4456777888888887 5 5556789999999999999999999999986652 223332 2557999
Q ss_pred EEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE------EEEEeecCCceEEEecC
Q 004998 662 ICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA------LYCIVLNKLLIIFRYGM 711 (720)
Q Consensus 662 v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~------v~~v~~~~~~~~~~~~~ 711 (720)
|+||- ++.+|||||.|-.|-|=+|.||..+.+ .++|+|+|.-.+++|.-
T Consensus 237 lSFS~-dg~~lASaSEDh~IDIA~vetGd~~~eI~~~~~t~tVAWHPk~~LLAyA~ 291 (313)
T KOG1407|consen 237 LSFSH-DGRMLASASEDHFIDIAEVETGDRVWEIPCEGPTFTVAWHPKRPLLAYAC 291 (313)
T ss_pred EEecc-CcceeeccCccceEEeEecccCCeEEEeeccCCceeEEecCCCceeeEEe
Confidence 99996 567999999999999999999988876 58899999988888753
No 499
>KOG1273 consensus WD40 repeat protein [General function prediction only]
Probab=99.05 E-value=5e-10 Score=113.50 Aligned_cols=85 Identities=14% Similarity=0.250 Sum_probs=70.7
Q ss_pred eEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCCCcEEEEECCC
Q 004998 610 VCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLH 688 (720)
Q Consensus 610 V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~v~~~~~~~~~laS~s~D~~v~lWDv~t 688 (720)
-.||.|++-|.+||.|..||.|-|||+.|.. +-..+ .|--+|+|||||+++ ..|.|+|.|..|++||+..
T Consensus 26 a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~~--------iar~lsaH~~pi~sl~WS~dg-r~LltsS~D~si~lwDl~~ 96 (405)
T KOG1273|consen 26 AECCQFSRWGDYLAVGCANGRVVIYDFDTFR--------IARMLSAHVRPITSLCWSRDG-RKLLTSSRDWSIKLWDLLK 96 (405)
T ss_pred cceEEeccCcceeeeeccCCcEEEEEccccc--------hhhhhhccccceeEEEecCCC-CEeeeecCCceeEEEeccC
Confidence 6899999999999999999999999998862 11111 235689999999965 5899999999999999999
Q ss_pred CcEEEE------EEEEeecCC
Q 004998 689 LIYFSA------LYCIVLNKL 703 (720)
Q Consensus 689 g~~~~~------v~~v~~~~~ 703 (720)
|.+++. ||.+-|+|-
T Consensus 97 gs~l~rirf~spv~~~q~hp~ 117 (405)
T KOG1273|consen 97 GSPLKRIRFDSPVWGAQWHPR 117 (405)
T ss_pred CCceeEEEccCccceeeeccc
Confidence 999887 677777553
No 500
>KOG0276 consensus Vesicle coat complex COPI, beta' subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.04 E-value=1.3e-09 Score=118.86 Aligned_cols=119 Identities=9% Similarity=0.044 Sum_probs=95.8
Q ss_pred hhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEE
Q 004998 584 CKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSIC 663 (720)
Q Consensus 584 ~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~ 663 (720)
.+.-.|++++-+.+.. .|+..|.||+-+|.--++.|+|.|.+||+||+... +. |....-+|..-|.+|+
T Consensus 79 IrVfnynt~ekV~~Fe-----AH~DyIR~iavHPt~P~vLtsSDDm~iKlW~we~~-wa-----~~qtfeGH~HyVMqv~ 147 (794)
T KOG0276|consen 79 IRVFNYNTGEKVKTFE-----AHSDYIRSIAVHPTLPYVLTSSDDMTIKLWDWENE-WA-----CEQTFEGHEHYVMQVA 147 (794)
T ss_pred EEEEecccceeeEEee-----ccccceeeeeecCCCCeEEecCCccEEEEeeccCc-ee-----eeeEEcCcceEEEEEE
Confidence 4555677777777765 34889999999999999999999999999999765 11 2222334567799999
Q ss_pred EecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCc--eEEEecCcc
Q 004998 664 WNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLL--IIFRYGMFQ 713 (720)
Q Consensus 664 ~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~-------v~~v~~~~~~--~~~~~~~~~ 713 (720)
|||.+.+.+||||-|+|||||.+.+..+.-| |+||+|=+.+ -++.+|+=|
T Consensus 148 fnPkD~ntFaS~sLDrTVKVWslgs~~~nfTl~gHekGVN~Vdyy~~gdkpylIsgaDD 206 (794)
T KOG0276|consen 148 FNPKDPNTFASASLDRTVKVWSLGSPHPNFTLEGHEKGVNCVDYYTGGDKPYLISGADD 206 (794)
T ss_pred ecCCCccceeeeeccccEEEEEcCCCCCceeeeccccCcceEEeccCCCcceEEecCCC
Confidence 9999999999999999999999988777665 9999996555 577777755
Done!