Query 004998
Match_columns 720
No_of_seqs 751 out of 3614
Neff 7.9
Searched_HMMs 29240
Date Mon Mar 25 12:16:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004998.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004998hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3fpq_A Serine/threonine-protei 100.0 7.1E-46 2.4E-50 390.6 14.0 211 63-367 71-289 (290)
2 4g31_A Eukaryotic translation 100.0 8.7E-46 3E-50 392.5 11.2 227 63-367 49-286 (299)
3 4fih_A Serine/threonine-protei 100.0 7E-45 2.4E-49 391.0 16.7 240 29-368 79-331 (346)
4 4b9d_A Serine/threonine-protei 100.0 2E-45 6.9E-50 395.8 11.4 245 27-367 27-283 (350)
5 3hyh_A Carbon catabolite-derep 100.0 3.4E-45 1.2E-49 382.2 12.3 206 63-367 59-269 (275)
6 4aw0_A HPDK1, 3-phosphoinositi 100.0 2.1E-45 7.2E-50 389.4 9.9 246 26-367 34-297 (311)
7 4fie_A Serine/threonine-protei 100.0 6.7E-44 2.3E-48 392.6 16.8 242 27-368 154-408 (423)
8 3ubd_A Ribosomal protein S6 ki 100.0 3.8E-44 1.3E-48 379.4 12.6 208 62-367 71-288 (304)
9 4g3f_A NF-kappa-beta-inducing 100.0 9.4E-44 3.2E-48 381.0 12.0 215 65-370 98-332 (336)
10 4b99_A Mitogen-activated prote 100.0 3.8E-43 1.3E-47 386.3 13.1 221 63-371 99-355 (398)
11 3omv_A RAF proto-oncogene seri 100.0 1.4E-41 4.8E-46 360.5 13.7 205 63-360 78-293 (307)
12 4f9c_A Cell division cycle 7-r 100.0 8.1E-41 2.8E-45 363.7 14.3 235 63-367 65-359 (361)
13 3v5w_A G-protein coupled recep 100.0 1.7E-40 5.8E-45 381.6 9.0 203 66-367 241-456 (689)
14 4gt4_A Tyrosine-protein kinase 100.0 3.6E-40 1.2E-44 350.6 10.8 204 64-361 76-300 (308)
15 4asz_A BDNF/NT-3 growth factor 100.0 7.3E-40 2.5E-44 346.7 12.1 203 63-359 61-281 (299)
16 4aoj_A High affinity nerve gro 100.0 2.8E-39 9.5E-44 346.9 15.5 205 63-360 89-312 (329)
17 3uto_A Twitchin; kinase, muscl 100.0 4.9E-39 1.7E-43 370.0 15.5 208 66-369 203-419 (573)
18 3hmm_A TGF-beta receptor type- 100.0 3.2E-39 1.1E-43 343.0 8.0 212 61-360 41-290 (303)
19 4ase_A Vascular endothelial gr 100.0 7.7E-39 2.6E-43 346.3 10.6 207 64-361 114-341 (353)
20 3qd2_B Eukaryotic translation 100.0 9.9E-37 3.4E-41 325.6 12.8 226 63-366 50-331 (332)
21 3fxz_A Serine/threonine-protei 100.0 5.1E-36 1.7E-40 317.2 17.4 209 65-369 65-278 (297)
22 3fe3_A MAP/microtubule affinit 100.0 2.4E-36 8.2E-41 324.6 14.2 208 63-368 60-272 (328)
23 2yab_A Death-associated protei 100.0 7.5E-36 2.6E-40 325.0 18.0 207 64-367 62-279 (361)
24 3p1a_A MYT1 kinase, membrane-a 100.0 3.2E-36 1.1E-40 320.7 13.4 206 65-367 104-311 (311)
25 3o0g_A Cell division protein k 100.0 1.3E-35 4.4E-40 312.5 15.6 211 63-367 47-289 (292)
26 3ttj_A Mitogen-activated prote 100.0 8.7E-36 3E-40 335.3 14.8 213 63-370 107-365 (464)
27 3niz_A Rhodanese family protei 100.0 9.6E-36 3.3E-40 317.1 14.2 211 64-368 66-308 (311)
28 3g33_A Cell division protein k 100.0 3.6E-35 1.2E-39 311.5 18.5 210 66-367 60-303 (308)
29 1cm8_A Phosphorylated MAP kina 100.0 1.8E-35 6.2E-40 322.7 15.2 213 63-371 70-318 (367)
30 1ob3_A PFPK5, cell division co 100.0 1.6E-35 5.3E-40 311.4 14.0 209 65-367 48-287 (288)
31 1tki_A Titin; serine kinase, m 100.0 1E-35 3.5E-40 318.6 12.7 208 65-368 49-265 (321)
32 1fot_A TPK1 delta, CAMP-depend 100.0 1.4E-35 4.7E-40 317.3 13.5 201 66-367 55-265 (318)
33 3oz6_A Mitogen-activated prote 100.0 1.1E-35 3.8E-40 326.5 12.9 235 63-370 54-338 (388)
34 3zgw_A Maternal embryonic leuc 100.0 1.4E-35 4.7E-40 321.1 13.3 209 63-367 54-267 (347)
35 2y0a_A Death-associated protei 100.0 3.9E-35 1.3E-39 314.6 16.5 207 64-367 61-278 (326)
36 1o6l_A RAC-beta serine/threoni 100.0 2.5E-35 8.7E-40 317.8 14.7 206 64-367 52-267 (337)
37 2bdw_A Hypothetical protein K1 100.0 2.3E-35 7.7E-40 321.3 14.4 208 63-367 74-291 (362)
38 3rp9_A Mitogen-activated prote 100.0 1.8E-35 6.1E-40 332.1 13.6 244 63-370 98-406 (458)
39 3txo_A PKC-L, NPKC-ETA, protei 100.0 6.3E-36 2.2E-40 324.6 8.6 204 66-367 72-287 (353)
40 1t4h_A Serine/threonine-protei 100.0 4.6E-35 1.6E-39 307.7 14.8 211 63-367 71-289 (290)
41 4aw2_A Serine/threonine-protei 100.0 1.5E-35 5.3E-40 330.3 11.7 209 66-367 123-345 (437)
42 3mi9_A Cell division protein k 100.0 9.5E-35 3.3E-39 314.2 17.4 220 63-370 62-321 (351)
43 1rdq_E PKA C-alpha, CAMP-depen 100.0 2.7E-35 9.4E-40 319.2 13.1 202 65-367 89-300 (350)
44 3h4j_B AMPK kdaid, SNF1-like p 100.0 5.3E-36 1.8E-40 323.0 6.7 206 63-367 55-265 (336)
45 3soa_A Calcium/calmodulin-depe 100.0 5.4E-35 1.8E-39 326.8 15.0 208 63-366 56-273 (444)
46 1u5q_A Serine/threonine protei 100.0 3.1E-35 1.1E-39 318.6 12.5 207 64-369 101-314 (348)
47 4fr4_A YANK1, serine/threonine 100.0 2.8E-35 9.6E-40 322.9 12.2 206 64-367 62-278 (384)
48 2eue_A Carbon catabolite derep 100.0 5.5E-35 1.9E-39 304.8 13.4 207 63-367 59-269 (275)
49 1kob_A Twitchin; kinase, intra 100.0 5.5E-35 1.9E-39 321.1 14.0 211 63-369 94-313 (387)
50 1xjd_A Protein kinase C, theta 100.0 1E-35 3.5E-40 321.9 7.7 204 66-367 66-276 (345)
51 2w4o_A Calcium/calmodulin-depe 100.0 2E-34 6.8E-39 312.2 17.4 208 66-369 97-314 (349)
52 4dc2_A Protein kinase C IOTA t 100.0 6.1E-35 2.1E-39 321.4 13.3 205 66-367 101-325 (396)
53 3v8s_A RHO-associated protein 100.0 2.7E-35 9.2E-40 325.8 10.4 206 66-367 118-336 (410)
54 2zv2_A Calcium/calmodulin-depe 100.0 8.6E-35 2.9E-39 307.1 13.8 207 65-366 84-298 (298)
55 3tki_A Serine/threonine-protei 100.0 3.5E-35 1.2E-39 314.7 10.7 210 65-367 53-268 (323)
56 3c0i_A Peripheral plasma membr 100.0 1.4E-34 4.7E-39 313.7 15.2 208 64-367 73-293 (351)
57 3nyv_A Calmodulin-domain prote 100.0 2.3E-34 7.8E-39 325.3 17.6 207 63-367 72-288 (484)
58 3gni_B Strad alpha; kinase fol 100.0 6.2E-35 2.1E-39 320.5 12.5 218 63-368 72-341 (389)
59 2r5t_A Serine/threonine-protei 100.0 5.2E-35 1.8E-39 319.7 11.8 200 70-367 92-300 (373)
60 2fst_X Mitogen-activated prote 100.0 3.2E-35 1.1E-39 320.7 9.9 214 63-372 74-323 (367)
61 3dbq_A Dual specificity protei 100.0 5E-35 1.7E-39 315.8 11.1 213 64-370 54-283 (343)
62 3a8x_A Protein kinase C IOTA t 100.0 1.2E-34 4.2E-39 313.5 13.7 206 65-367 57-282 (345)
63 2vd5_A DMPK protein; serine/th 100.0 4.8E-35 1.6E-39 324.0 10.3 207 66-367 110-334 (412)
64 3mtl_A Cell division protein k 100.0 2.4E-34 8.1E-39 308.0 14.8 213 63-369 46-290 (324)
65 3gbz_A Kinase, CMGC CDK; ssgci 100.0 1.3E-34 4.4E-39 310.8 12.8 209 64-367 80-325 (329)
66 2x4f_A Myosin light chain kina 100.0 1.4E-34 4.8E-39 316.4 13.2 208 65-367 134-349 (373)
67 3dls_A PAS domain-containing s 100.0 4.5E-34 1.5E-38 307.7 16.8 203 63-369 75-283 (335)
68 2a2a_A Death-associated protei 100.0 5.4E-34 1.9E-38 304.6 17.3 208 64-368 62-280 (321)
69 2pmi_A Negative RE, cyclin-dep 100.0 2.4E-34 8.2E-39 307.0 14.4 212 64-369 50-302 (317)
70 4ejn_A RAC-alpha serine/threon 100.0 2.7E-34 9.1E-39 321.5 15.2 207 63-367 194-411 (446)
71 1zy4_A Serine/threonine-protei 100.0 3.4E-34 1.1E-38 301.7 15.0 227 65-367 50-290 (303)
72 3is5_A Calcium-dependent prote 100.0 3.3E-34 1.1E-38 301.0 14.7 208 63-366 66-284 (285)
73 2zmd_A Dual specificity protei 100.0 1.2E-34 4.1E-39 318.8 11.6 212 64-369 101-329 (390)
74 3uc3_A Serine/threonine-protei 100.0 2.5E-34 8.7E-39 312.9 14.0 207 65-367 64-281 (361)
75 3n9x_A Phosphotransferase; mal 100.0 2.4E-34 8.1E-39 320.7 14.0 241 63-373 71-374 (432)
76 3mwu_A Calmodulin-domain prote 100.0 7.5E-34 2.6E-38 321.4 18.1 206 64-367 68-283 (486)
77 3kk8_A Calcium/calmodulin depe 100.0 2.5E-34 8.5E-39 300.8 13.0 211 63-370 51-271 (284)
78 2c30_A Serine/threonine-protei 100.0 1.4E-33 4.7E-38 301.9 18.9 207 65-368 90-302 (321)
79 3a62_A Ribosomal protein S6 ki 100.0 1.7E-34 5.8E-39 309.8 11.5 207 63-367 67-283 (327)
80 1x8b_A WEE1HU, WEE1-like prote 100.0 2.3E-34 7.8E-39 300.6 12.2 223 63-367 56-286 (289)
81 2y94_A 5'-AMP-activated protei 100.0 2E-34 6.8E-39 324.6 12.3 207 63-367 62-273 (476)
82 3rgf_A Cyclin-dependent kinase 100.0 5.6E-34 1.9E-38 314.8 15.2 216 64-368 65-341 (405)
83 3fdn_A Serine/threonine-protei 100.0 1.3E-34 4.4E-39 302.6 9.1 203 65-367 57-264 (279)
84 3pg1_A Mitogen-activated prote 100.0 2.7E-34 9.3E-39 311.8 11.9 220 63-373 75-329 (362)
85 3lij_A Calcium/calmodulin depe 100.0 9.4E-34 3.2E-38 321.3 16.6 207 63-367 82-298 (494)
86 2i0e_A Protein kinase C-beta I 100.0 1.3E-33 4.6E-38 306.3 17.0 204 66-367 69-283 (353)
87 3llt_A Serine/threonine kinase 100.0 5.6E-34 1.9E-38 309.1 14.0 202 66-365 80-360 (360)
88 3qyz_A Mitogen-activated prote 100.0 1.6E-34 5.4E-39 314.5 9.6 220 63-372 71-325 (364)
89 2r3i_A Cell division protein k 100.0 7.9E-34 2.7E-38 299.2 14.3 213 64-370 49-293 (299)
90 1ua2_A CAK, cell division prot 100.0 7.4E-34 2.5E-38 307.0 14.1 210 65-368 60-299 (346)
91 3ork_A Serine/threonine protei 100.0 1.7E-34 5.9E-39 307.0 8.8 216 63-366 58-279 (311)
92 3i6u_A CDS1, serine/threonine- 100.0 4.1E-34 1.4E-38 317.5 12.2 208 63-367 186-406 (419)
93 3fme_A Dual specificity mitoge 100.0 1.8E-34 6.3E-39 302.5 8.9 207 66-367 55-273 (290)
94 2xrw_A Mitogen-activated prote 100.0 2.9E-34 1E-38 313.4 10.8 213 63-370 70-328 (371)
95 4exu_A Mitogen-activated prote 100.0 1.8E-34 6.1E-39 315.1 9.0 213 63-372 87-335 (371)
96 3f3z_A Calcium/calmodulin-depe 100.0 1.4E-33 4.7E-38 294.3 15.2 206 64-367 53-268 (277)
97 1nxk_A MAP kinase-activated pr 100.0 5.3E-34 1.8E-38 314.7 12.3 211 66-367 103-328 (400)
98 4e7w_A Glycogen synthase kinas 100.0 1.3E-33 4.3E-38 311.1 15.1 214 65-369 80-330 (394)
99 2ac3_A MAP kinase-interacting 100.0 7.3E-34 2.5E-38 302.1 12.5 217 63-367 56-302 (316)
100 3lm5_A Serine/threonine-protei 100.0 6.1E-34 2.1E-38 305.3 11.7 208 64-367 75-294 (327)
101 3pfq_A PKC-B, PKC-beta, protei 100.0 3.7E-34 1.3E-38 335.9 11.0 204 66-367 390-604 (674)
102 2acx_A G protein-coupled recep 100.0 3.1E-34 1E-38 328.3 9.9 206 65-367 232-451 (576)
103 2j7t_A Serine/threonine-protei 100.0 7.8E-34 2.7E-38 299.7 12.3 212 64-370 63-285 (302)
104 3q5i_A Protein kinase; CDPK, m 100.0 2.5E-33 8.7E-38 318.5 17.3 207 65-369 94-310 (504)
105 2yex_A Serine/threonine-protei 100.0 1.2E-33 4.2E-38 294.0 13.2 213 64-369 52-270 (276)
106 3cok_A Serine/threonine-protei 100.0 4.7E-34 1.6E-38 298.0 10.0 209 63-368 57-270 (278)
107 3kn6_A Ribosomal protein S6 ki 100.0 1.2E-33 4.2E-38 302.9 13.0 209 64-367 52-277 (325)
108 4agu_A Cyclin-dependent kinase 100.0 1.1E-33 3.8E-38 300.1 12.2 210 65-369 50-293 (311)
109 3eb0_A Putative uncharacterize 100.0 1.8E-33 6.2E-38 308.4 14.3 214 65-369 48-330 (383)
110 3coi_A Mitogen-activated prote 100.0 3.3E-34 1.1E-38 310.4 8.2 213 63-372 69-317 (353)
111 1j1b_A Glycogen synthase kinas 100.0 2E-33 7E-38 312.0 14.7 214 65-369 95-345 (420)
112 3kvw_A DYRK2, dual specificity 100.0 1.9E-33 6.3E-38 313.2 14.3 196 75-367 157-415 (429)
113 4eqm_A Protein kinase; transfe 100.0 1.3E-33 4.5E-38 298.1 11.4 209 63-365 57-272 (294)
114 3hko_A Calcium/calmodulin-depe 100.0 1.5E-33 5.2E-38 303.5 11.9 218 63-370 74-340 (345)
115 1blx_A Cyclin-dependent kinase 100.0 3.8E-33 1.3E-37 297.7 14.8 213 66-369 60-305 (326)
116 3eqc_A Dual specificity mitoge 100.0 6.6E-34 2.3E-38 308.7 8.9 208 63-367 77-331 (360)
117 3byv_A Rhoptry kinase; malaria 100.0 6.5E-35 2.2E-39 319.2 0.4 202 66-367 122-366 (377)
118 3an0_A Dual specificity mitoge 100.0 6.6E-34 2.3E-38 306.0 8.1 203 70-367 103-317 (340)
119 3nsz_A CK II alpha, casein kin 100.0 3.3E-33 1.1E-37 298.9 12.7 208 64-368 77-327 (330)
120 2qr7_A Ribosomal protein S6 ki 100.0 2.1E-33 7.1E-38 303.5 11.2 207 66-367 64-284 (342)
121 3lb7_A RAF proto-oncogene seri 100.0 5.1E-33 1.8E-37 295.6 13.8 208 63-363 78-296 (307)
122 2vgo_A Serine/threonine-protei 100.0 4.2E-33 1.4E-37 291.9 13.0 204 64-367 61-269 (284)
123 2vwi_A Serine/threonine-protei 100.0 4.4E-33 1.5E-37 293.6 13.2 215 64-367 60-294 (303)
124 3e3p_A Protein kinase, putativ 100.0 3.9E-33 1.3E-37 302.1 13.0 217 63-370 65-324 (360)
125 4aaa_A Cyclin-dependent kinase 100.0 2.5E-33 8.7E-38 300.7 11.5 209 64-367 71-313 (331)
126 3c4z_A Rhodopsin kinase; Ser/T 100.0 3.4E-33 1.2E-37 318.6 12.9 207 65-367 233-455 (543)
127 3com_A Serine/threonine-protei 100.0 1.2E-32 4E-37 292.5 16.2 212 64-369 71-287 (314)
128 3p23_A Serine/threonine-protei 100.0 3.1E-33 1.1E-37 311.7 11.8 212 64-367 64-290 (432)
129 2jam_A Calcium/calmodulin-depe 100.0 5.9E-33 2E-37 293.8 13.3 206 64-367 53-268 (304)
130 2ycf_A Serine/threonine-protei 100.0 2.7E-33 9.1E-38 299.2 10.7 208 63-367 61-281 (322)
131 2y7j_A Phosphorylase B kinase 100.0 1E-32 3.5E-37 300.6 15.4 204 66-366 148-365 (365)
132 2pml_X PFPK7, Ser/Thr protein 100.0 3.8E-33 1.3E-37 300.7 11.7 208 65-368 91-330 (348)
133 3bhy_A Death-associated protei 100.0 6E-33 2E-37 290.2 12.7 207 64-367 55-272 (283)
134 3a7i_A MST3 kinase, serine/thr 100.0 1.2E-32 4.1E-37 291.1 14.8 207 63-367 66-277 (303)
135 3p86_A Serine/threonine-protei 100.0 4.1E-33 1.4E-37 296.7 11.0 202 64-360 81-291 (309)
136 2clq_A Mitogen-activated prote 100.0 8.4E-33 2.9E-37 290.6 13.1 211 64-368 66-286 (295)
137 2x7f_A TRAF2 and NCK-interacti 100.0 1.2E-32 4.2E-37 294.0 14.5 213 65-368 68-294 (326)
138 1wak_A Serine/threonine-protei 100.0 2.4E-33 8.2E-38 307.2 9.1 252 66-366 82-397 (397)
139 2rku_A Serine/threonine-protei 100.0 8.2E-33 2.8E-37 291.1 12.7 206 64-367 62-272 (294)
140 2owb_A Serine/threonine-protei 100.0 6.9E-33 2.4E-37 298.0 12.3 205 65-367 89-298 (335)
141 3cek_A Dual specificity protei 100.0 4.7E-33 1.6E-37 295.9 10.6 216 63-372 72-304 (313)
142 3q60_A ROP5B; pseudokinase, tr 100.0 1.5E-34 5E-39 315.5 -1.0 207 68-368 116-360 (371)
143 3kmu_A ILK, integrin-linked ki 100.0 1E-32 3.4E-37 285.8 12.8 200 63-360 53-263 (271)
144 3kex_A Receptor tyrosine-prote 100.0 1E-32 3.5E-37 295.3 13.2 206 62-361 60-270 (325)
145 2w5a_A Serine/threonine-protei 100.0 4.5E-33 1.5E-37 290.5 10.1 213 64-369 52-276 (279)
146 2b9h_A MAP kinase FUS3, mitoge 100.0 7.2E-33 2.5E-37 299.1 11.7 224 63-369 55-314 (353)
147 1vzo_A Ribosomal protein S6 ki 100.0 9E-33 3.1E-37 299.8 12.2 207 65-367 106-328 (355)
148 1z57_A Dual specificity protei 100.0 9.5E-33 3.3E-37 295.3 12.2 206 66-369 60-337 (339)
149 2i6l_A Mitogen-activated prote 100.0 1.9E-32 6.5E-37 290.8 14.3 219 63-371 54-316 (320)
150 2psq_A Fibroblast growth facto 100.0 1.7E-32 5.7E-37 299.5 14.0 204 64-360 133-357 (370)
151 2h6d_A 5'-AMP-activated protei 100.0 1.7E-32 5.8E-37 285.6 13.4 206 64-368 58-269 (276)
152 3kul_A Ephrin type-A receptor 100.0 1.6E-32 5.5E-37 294.1 13.5 205 64-360 97-306 (325)
153 4hcu_A Tyrosine-protein kinase 100.0 1.4E-32 5E-37 285.5 12.4 204 64-361 52-260 (269)
154 3soc_A Activin receptor type-2 100.0 5.8E-33 2E-37 297.0 9.5 209 62-360 63-311 (322)
155 1phk_A Phosphorylase kinase; g 100.0 2.9E-32 9.9E-37 287.1 14.7 207 65-368 71-291 (298)
156 4f0f_A Serine/threonine-protei 100.0 3.9E-32 1.3E-36 284.8 14.9 198 64-360 70-282 (287)
157 1mp8_A Focal adhesion kinase 1 100.0 1.1E-32 3.8E-37 288.4 10.7 203 63-360 62-269 (281)
158 4euu_A Serine/threonine-protei 100.0 2.1E-32 7.2E-37 291.8 12.8 205 65-362 55-304 (319)
159 3fhr_A MAP kinase-activated pr 100.0 4.1E-33 1.4E-37 300.2 7.3 206 70-367 75-294 (336)
160 3s95_A LIMK-1, LIM domain kina 100.0 5.4E-33 1.8E-37 295.0 7.8 215 63-360 53-275 (310)
161 3sxs_A Cytoplasmic tyrosine-pr 100.0 2.5E-32 8.7E-37 283.3 11.8 203 65-361 51-258 (268)
162 3vhe_A Vascular endothelial gr 100.0 1.6E-32 5.4E-37 297.2 10.6 208 63-361 71-349 (359)
163 3ugc_A Tyrosine-protein kinase 100.0 1.1E-32 3.7E-37 290.4 9.0 209 63-360 57-284 (295)
164 2wei_A Calmodulin-domain prote 100.0 2.6E-32 9E-37 286.4 11.4 207 63-367 67-283 (287)
165 2vx3_A Dual specificity tyrosi 100.0 4.3E-32 1.5E-36 297.3 13.4 205 66-367 99-379 (382)
166 2wtk_C Serine/threonine-protei 100.0 1.2E-31 3.9E-36 283.5 16.2 214 64-369 53-272 (305)
167 3poz_A Epidermal growth factor 100.0 2.1E-32 7.3E-37 293.2 10.6 204 63-360 63-271 (327)
168 3gen_A Tyrosine-protein kinase 100.0 3.8E-32 1.3E-36 284.2 12.0 203 65-361 67-274 (283)
169 3dtc_A Mitogen-activated prote 100.0 3.2E-32 1.1E-36 282.7 11.4 199 64-361 53-267 (271)
170 2eu9_A Dual specificity protei 100.0 4.4E-32 1.5E-36 292.3 12.8 204 66-367 65-340 (355)
171 3op5_A Serine/threonine-protei 100.0 1.7E-32 5.8E-37 298.5 9.5 212 66-360 97-322 (364)
172 2dyl_A Dual specificity mitoge 100.0 2.4E-32 8.1E-37 290.3 10.2 206 67-367 74-290 (318)
173 1fvr_A Tyrosine-protein kinase 100.0 3.2E-32 1.1E-36 291.4 11.1 202 63-360 71-293 (327)
174 1rjb_A FL cytokine receptor; k 100.0 3.8E-32 1.3E-36 292.6 11.8 207 63-361 94-328 (344)
175 3pls_A Macrophage-stimulating 100.0 8.8E-32 3E-36 283.2 14.3 209 63-360 68-280 (298)
176 3og7_A AKAP9-BRAF fusion prote 100.0 4.5E-32 1.6E-36 285.1 12.1 205 63-360 66-281 (289)
177 3qup_A Tyrosine-protein kinase 100.0 7.4E-32 2.5E-36 287.8 13.8 215 63-367 71-305 (323)
178 3cbl_A C-FES, proto-oncogene t 100.0 1.7E-32 5.7E-37 300.2 8.9 204 63-360 158-367 (377)
179 3f66_A Hepatocyte growth facto 100.0 6.8E-32 2.3E-36 284.5 13.2 207 63-360 72-284 (298)
180 1q8y_A SR protein kinase; tran 100.0 1.7E-32 5.9E-37 298.3 8.8 209 66-367 64-340 (373)
181 3l9p_A Anaplastic lymphoma kin 100.0 1.6E-32 5.3E-37 299.4 8.4 209 63-364 120-342 (367)
182 4e5w_A Tyrosine-protein kinase 100.0 5.7E-32 1.9E-36 285.4 12.4 209 63-360 69-295 (302)
183 2izr_A Casein kinase I isoform 100.0 6.2E-32 2.1E-36 289.8 12.7 210 64-360 51-274 (330)
184 3lzb_A Epidermal growth factor 100.0 5.7E-32 1.9E-36 290.1 12.3 204 63-360 63-271 (327)
185 4fvq_A Tyrosine-protein kinase 100.0 3.5E-32 1.2E-36 285.2 10.4 195 64-360 59-268 (289)
186 2a19_B Interferon-induced, dou 100.0 3.9E-32 1.3E-36 283.7 10.3 208 64-366 51-273 (284)
187 3c1x_A Hepatocyte growth facto 100.0 4E-32 1.4E-36 296.9 10.9 208 63-360 136-348 (373)
188 2rio_A Serine/threonine-protei 100.0 3E-32 1E-36 303.9 9.7 211 65-367 56-302 (434)
189 3tt0_A Basic fibroblast growth 100.0 1.1E-31 3.9E-36 294.0 14.2 205 63-360 120-345 (382)
190 2eva_A TAK1 kinase - TAB1 chim 100.0 5.6E-32 1.9E-36 287.3 11.0 198 64-360 48-256 (307)
191 2qol_A Ephrin receptor; recept 100.0 8.3E-32 2.8E-36 294.4 12.5 205 64-360 93-302 (373)
192 3q4u_A Activin receptor type-1 100.0 2.5E-32 8.4E-37 287.9 7.7 210 63-360 48-295 (301)
193 1u59_A Tyrosine-protein kinase 100.0 1.1E-31 3.8E-36 281.7 12.7 206 63-361 56-266 (287)
194 2ivs_A Proto-oncogene tyrosine 100.0 8.8E-32 3E-36 285.4 11.9 205 63-360 72-304 (314)
195 3cc6_A Protein tyrosine kinase 100.0 6.2E-32 2.1E-36 282.6 10.5 203 63-360 59-266 (281)
196 1luf_A Muscle-specific tyrosin 100.0 7.4E-32 2.5E-36 289.8 11.1 205 63-360 96-328 (343)
197 3aln_A Dual specificity mitoge 100.0 4.1E-32 1.4E-36 290.5 9.0 203 70-367 74-292 (327)
198 1k9a_A Carboxyl-terminal SRC k 100.0 7E-32 2.4E-36 302.3 11.3 200 64-360 233-438 (450)
199 1t46_A HOMO sapiens V-KIT hard 100.0 1E-31 3.4E-36 284.8 11.5 205 64-360 73-300 (313)
200 1csn_A Casein kinase-1; phosph 100.0 7.3E-32 2.5E-36 283.8 10.3 208 66-360 54-276 (298)
201 3uim_A Brassinosteroid insensi 100.0 2.7E-31 9.2E-36 283.8 14.6 208 63-363 73-307 (326)
202 2h34_A Serine/threonine-protei 100.0 1.2E-31 3.9E-36 285.1 11.6 202 64-360 81-289 (309)
203 2y4i_B KSR2, HKSR2, kinase sup 100.0 3.9E-31 1.3E-35 281.2 15.6 208 62-360 74-295 (319)
204 3a99_A Proto-oncogene serine/t 100.0 1.8E-31 6.2E-36 285.1 13.0 205 63-370 92-303 (320)
205 2v62_A Serine/threonine-protei 100.0 5.6E-32 1.9E-36 292.2 8.6 211 66-360 97-321 (345)
206 3t9t_A Tyrosine-protein kinase 100.0 1.4E-31 4.8E-36 277.1 11.2 202 65-360 51-257 (267)
207 2xir_A Vascular endothelial gr 100.0 8.9E-32 3E-36 285.6 9.9 208 63-361 76-304 (316)
208 1mqb_A Ephrin type-A receptor 100.0 3E-31 1E-35 285.2 14.0 206 63-360 92-302 (333)
209 2qkw_B Protein kinase; three-h 100.0 4.6E-32 1.6E-36 289.4 7.6 207 63-361 81-309 (321)
210 1byg_A CSK, protein (C-termina 100.0 4.7E-32 1.6E-36 283.0 6.7 200 64-360 61-266 (278)
211 3lxl_A Tyrosine-protein kinase 100.0 1.2E-31 4E-36 287.1 9.9 208 64-360 71-296 (327)
212 1p4o_A Insulin-like growth fac 100.0 2.1E-31 7.2E-36 283.9 11.4 206 63-361 74-293 (322)
213 3kfa_A Tyrosine-protein kinase 100.0 3.2E-31 1.1E-35 277.7 12.6 203 64-360 56-264 (288)
214 3brb_A Proto-oncogene tyrosine 100.0 3.3E-31 1.1E-35 281.4 12.8 208 64-360 83-301 (313)
215 2i1m_A Macrophage colony-stimu 100.0 1E-31 3.5E-36 287.9 8.5 205 64-360 96-319 (333)
216 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 1.8E-31 6.2E-36 299.2 10.3 206 65-366 227-441 (452)
217 1xbb_A Tyrosine-protein kinase 100.0 5.9E-31 2E-35 276.7 13.0 204 63-360 64-272 (291)
218 3lxp_A Non-receptor tyrosine-p 100.0 2.3E-31 7.7E-36 284.0 9.7 207 63-360 79-303 (318)
219 1u46_A ACK-1, activated CDC42 100.0 2.4E-31 8.4E-36 278.8 9.7 205 63-360 67-277 (291)
220 2yfx_A Tyrosine-protein kinase 100.0 1.6E-31 5.4E-36 286.1 8.3 210 63-365 79-302 (327)
221 2ozo_A Tyrosine-protein kinase 100.0 9.3E-31 3.2E-35 304.1 15.3 204 64-360 383-591 (613)
222 3mdy_A Bone morphogenetic prot 100.0 6.8E-31 2.3E-35 281.4 12.9 208 65-360 79-324 (337)
223 2wqm_A Serine/threonine-protei 100.0 6.2E-31 2.1E-35 278.9 12.5 204 63-360 78-290 (310)
224 2iwi_A Serine/threonine-protei 100.0 6E-31 2E-35 279.3 12.1 206 63-370 80-293 (312)
225 4hgt_A Casein kinase I isoform 100.0 9.1E-31 3.1E-35 274.9 13.4 211 64-360 51-273 (296)
226 1opk_A P150, C-ABL, proto-onco 100.0 5.7E-31 2E-35 298.5 12.7 201 65-360 264-471 (495)
227 1qcf_A Haematopoetic cell kina 100.0 3.6E-31 1.2E-35 296.9 10.7 202 64-360 230-437 (454)
228 3g2f_A Bone morphogenetic prot 100.0 2.9E-31 1E-35 284.5 9.4 215 62-360 52-311 (336)
229 2pvf_A Fibroblast growth facto 100.0 7.5E-31 2.6E-35 281.8 12.4 205 63-360 86-311 (334)
230 4fl3_A Tyrosine-protein kinase 100.0 3.7E-31 1.3E-35 308.4 10.7 203 64-360 417-624 (635)
231 3gxj_A TGF-beta receptor type- 100.0 3.5E-32 1.2E-36 286.7 1.6 207 66-360 46-290 (303)
232 1qpc_A LCK kinase; alpha beta 100.0 7.2E-31 2.4E-35 274.0 11.0 202 64-360 55-262 (279)
233 3qa8_A MGC80376 protein; kinas 100.0 7.3E-31 2.5E-35 303.6 11.6 213 63-367 58-304 (676)
234 3uzp_A CKI-delta, CKID, casein 100.0 2.2E-30 7.7E-35 272.2 13.3 211 64-360 51-273 (296)
235 2nru_A Interleukin-1 receptor- 100.0 9.5E-31 3.2E-35 276.9 10.3 205 63-360 76-299 (307)
236 2buj_A Serine/threonine-protei 100.0 7.3E-31 2.5E-35 279.1 8.7 217 64-361 73-300 (317)
237 2h8h_A Proto-oncogene tyrosine 100.0 6.6E-31 2.3E-35 300.8 8.5 206 65-366 310-524 (535)
238 2w1i_A JAK2; chromosomal rearr 100.0 2E-30 6.8E-35 277.5 11.5 209 63-360 88-315 (326)
239 3ll6_A Cyclin G-associated kin 100.0 1.8E-30 6.2E-35 277.6 9.8 215 65-361 73-302 (337)
240 2jii_A Serine/threonine-protei 100.0 1.2E-30 4.1E-35 282.4 8.5 212 64-360 89-329 (352)
241 4eut_A Serine/threonine-protei 100.0 6.7E-31 2.3E-35 289.4 6.3 203 65-360 55-302 (396)
242 2j0j_A Focal adhesion kinase 1 100.0 4E-30 1.4E-34 300.8 13.1 202 64-360 438-644 (656)
243 3dzo_A Rhoptry kinase domain; 100.0 3.8E-31 1.3E-35 293.1 1.9 175 93-367 177-370 (413)
244 1b6c_B TGF-B superfamily recep 100.0 3.5E-30 1.2E-34 276.6 9.2 207 66-360 83-329 (342)
245 3e7e_A HBUB1, BUB1A, mitotic c 100.0 1.9E-30 6.3E-35 282.3 6.2 197 66-360 113-331 (365)
246 3m2w_A MAP kinase-activated pr 100.0 1.8E-29 6.1E-34 266.8 12.6 190 66-368 59-264 (299)
247 3sv0_A Casein kinase I-like; t 100.0 2.9E-29 9.9E-34 283.0 12.2 211 64-360 49-271 (483)
248 2pzi_A Probable serine/threoni 100.0 6.1E-30 2.1E-34 301.1 6.4 198 63-365 125-325 (681)
249 2vuw_A Serine/threonine-protei 100.0 4.1E-29 1.4E-33 268.4 10.0 170 93-365 134-336 (336)
250 3uqc_A Probable conserved tran 99.9 1E-27 3.5E-32 252.3 5.9 173 63-360 77-258 (286)
251 4azs_A Methyltransferase WBDD; 99.9 1.4E-26 4.6E-31 266.4 5.8 189 65-364 289-479 (569)
252 3en9_A Glycoprotease, O-sialog 99.7 3.5E-19 1.2E-23 203.5 0.3 93 64-171 386-479 (540)
253 4gqb_B Methylosome protein 50; 99.6 7.3E-15 2.5E-19 158.1 13.8 127 581-716 102-239 (344)
254 3ow8_A WD repeat-containing pr 99.6 1.3E-14 4.6E-19 154.1 15.6 121 582-716 186-314 (321)
255 2ynn_A Coatomer subunit beta'; 99.6 1.6E-14 5.4E-19 151.9 15.2 104 604-716 10-121 (304)
256 4gqb_B Methylosome protein 50; 99.5 2.3E-14 7.7E-19 154.2 14.1 127 578-717 145-283 (344)
257 2pm7_B Protein transport prote 99.5 3.6E-14 1.2E-18 148.7 14.9 108 603-716 5-125 (297)
258 2xzm_R RACK1; ribosome, transl 99.5 4.2E-14 1.4E-18 151.2 15.3 113 602-716 16-142 (343)
259 3frx_A Guanine nucleotide-bind 99.5 3.9E-14 1.3E-18 150.1 14.2 110 602-715 12-130 (319)
260 1vyh_C Platelet-activating fac 99.5 2.4E-14 8.2E-19 157.4 12.4 122 580-715 128-257 (410)
261 2ynn_A Coatomer subunit beta'; 99.5 3.3E-14 1.1E-18 149.5 12.7 125 578-716 31-165 (304)
262 1vyh_C Platelet-activating fac 99.5 4.9E-14 1.7E-18 154.9 14.2 106 603-717 104-217 (410)
263 3bg1_A Protein SEC13 homolog; 99.5 2.2E-14 7.6E-19 151.7 11.0 109 603-717 9-130 (316)
264 1zar_A RIO2 kinase; serine kin 99.5 1.8E-15 6.1E-20 158.5 1.9 88 64-168 151-239 (282)
265 4g56_B MGC81050 protein; prote 99.5 8.2E-14 2.8E-18 150.3 14.8 124 583-717 205-337 (357)
266 1got_B GT-beta; complex (GTP-b 99.5 1.6E-13 5.4E-18 146.6 16.6 121 581-715 163-293 (340)
267 1got_B GT-beta; complex (GTP-b 99.5 1.2E-13 4E-18 147.7 15.4 122 582-717 206-337 (340)
268 2ymu_A WD-40 repeat protein; u 99.5 1.2E-13 4.3E-18 157.2 15.3 105 601-716 10-122 (577)
269 3fm0_A Protein CIAO1; WDR39,SG 99.5 1.5E-13 5.2E-18 147.2 14.7 114 592-716 5-129 (345)
270 4gq1_A NUP37; propeller, trans 99.5 3.6E-14 1.2E-18 155.1 10.0 109 601-716 130-279 (393)
271 2hes_X YDR267CP; beta-propelle 99.5 2.3E-13 7.8E-18 144.8 15.7 110 605-716 56-177 (330)
272 4ery_A WD repeat-containing pr 99.5 3.2E-13 1.1E-17 141.6 16.1 104 604-716 20-131 (312)
273 3ow8_A WD repeat-containing pr 99.5 2.1E-13 7.3E-18 144.8 14.9 103 605-716 162-272 (321)
274 1nr0_A Actin interacting prote 99.5 2.2E-13 7.5E-18 157.8 16.2 131 581-717 169-349 (611)
275 2hes_X YDR267CP; beta-propelle 99.5 2.3E-13 7.7E-18 144.9 14.7 108 603-715 103-222 (330)
276 1erj_A Transcriptional repress 99.5 3.6E-13 1.2E-17 146.9 16.6 123 581-716 144-280 (393)
277 2pbi_B Guanine nucleotide-bind 99.5 3.2E-13 1.1E-17 145.3 16.0 123 581-717 219-351 (354)
278 4e54_B DNA damage-binding prot 99.5 1.2E-13 4E-18 152.8 12.6 108 605-717 117-234 (435)
279 4ery_A WD repeat-containing pr 99.5 4.2E-13 1.4E-17 140.7 15.4 121 582-716 45-173 (312)
280 2w18_A PALB2, fancn, partner a 99.5 1.9E-13 6.7E-18 145.3 12.1 107 604-718 175-352 (356)
281 3fm0_A Protein CIAO1; WDR39,SG 99.5 4E-13 1.4E-17 143.9 14.4 106 604-716 58-174 (345)
282 2aq5_A Coronin-1A; WD40 repeat 99.4 8.7E-13 3E-17 143.7 16.9 115 602-717 76-201 (402)
283 3iz6_a 40S ribosomal protein R 99.4 5.9E-13 2E-17 144.6 15.3 130 580-717 178-323 (380)
284 2pbi_B Guanine nucleotide-bind 99.4 6.8E-13 2.3E-17 142.8 15.4 105 604-716 151-264 (354)
285 3iz6_a 40S ribosomal protein R 99.4 4E-13 1.4E-17 145.9 13.6 107 602-717 244-369 (380)
286 4h5i_A Guanine nucleotide-exch 99.4 3.6E-13 1.2E-17 145.8 13.0 109 603-716 215-336 (365)
287 3f3f_A Nucleoporin SEH1; struc 99.4 7.9E-13 2.7E-17 138.3 14.8 111 603-717 7-137 (351)
288 4aow_A Guanine nucleotide-bind 99.4 7.6E-13 2.6E-17 139.3 14.7 121 582-717 195-331 (340)
289 4aow_A Guanine nucleotide-bind 99.4 1.5E-12 5.2E-17 137.0 16.6 119 590-717 26-153 (340)
290 3frx_A Guanine nucleotide-bind 99.4 1.5E-12 5.2E-17 137.7 16.1 124 580-716 85-220 (319)
291 4h5i_A Guanine nucleotide-exch 99.4 4.1E-13 1.4E-17 145.3 11.6 79 602-689 264-344 (365)
292 1erj_A Transcriptional repress 99.4 2.3E-12 7.8E-17 140.5 16.8 100 607-715 123-230 (393)
293 4g56_B MGC81050 protein; prote 99.4 6.7E-13 2.3E-17 143.1 12.3 128 579-716 158-294 (357)
294 2xzm_R RACK1; ribosome, transl 99.4 1.4E-12 4.8E-17 139.3 14.5 124 580-717 96-238 (343)
295 3zwl_B Eukaryotic translation 99.4 2.5E-12 8.4E-17 136.4 15.9 102 603-713 28-136 (369)
296 1nr0_A Actin interacting prote 99.4 2.1E-12 7.1E-17 149.5 16.5 107 601-716 141-263 (611)
297 2pm7_B Protein transport prote 99.4 2.6E-12 9E-17 134.3 15.7 109 603-716 95-231 (297)
298 3vu4_A KMHSV2; beta-propeller 99.4 1.7E-12 5.8E-17 139.7 13.9 104 603-715 191-328 (355)
299 3mmy_A MRNA export factor; mRN 99.4 3.4E-12 1.1E-16 135.3 15.8 108 603-717 35-154 (368)
300 3k26_A Polycomb protein EED; W 99.4 2.6E-12 8.8E-17 136.3 14.4 126 583-716 45-185 (366)
301 3jrp_A Fusion protein of prote 99.4 1.7E-12 5.8E-17 138.4 12.7 108 603-716 7-127 (379)
302 3dm0_A Maltose-binding peripla 99.4 2.2E-12 7.7E-17 151.4 14.8 112 601-716 376-496 (694)
303 2j04_B YDR362CP, TAU91; beta p 99.4 8.6E-13 2.9E-17 150.1 9.0 107 603-717 304-422 (524)
304 2ymu_A WD-40 repeat protein; u 99.3 3.6E-12 1.2E-16 145.0 14.0 104 603-717 463-574 (577)
305 3lrv_A PRE-mRNA-splicing facto 99.3 5.8E-12 2E-16 134.3 14.2 103 605-716 123-238 (343)
306 2oit_A Nucleoporin 214KDA; NH2 99.3 2.4E-12 8.2E-17 142.9 11.4 110 606-715 91-215 (434)
307 3vl1_A 26S proteasome regulato 99.3 6.4E-12 2.2E-16 136.8 14.6 120 582-715 119-270 (420)
308 3ei3_B DNA damage-binding prot 99.3 9.6E-12 3.3E-16 134.1 15.6 114 590-717 61-188 (383)
309 2pm9_A Protein WEB1, protein t 99.3 5.7E-12 2E-16 136.7 13.1 128 582-716 188-330 (416)
310 2j04_A TAU60, YPL007P, hypothe 99.3 7.5E-12 2.6E-16 141.2 14.3 100 605-717 83-205 (588)
311 3dm0_A Maltose-binding peripla 99.3 6E-12 2E-16 147.7 14.0 125 581-716 451-585 (694)
312 2oaj_A Protein SNI1; WD40 repe 99.3 7.6E-12 2.6E-16 151.5 14.7 101 605-715 15-121 (902)
313 3dwl_C Actin-related protein 2 99.3 5.4E-12 1.8E-16 135.5 11.0 108 602-715 50-169 (377)
314 2oaj_A Protein SNI1; WD40 repe 99.3 1.2E-11 4E-16 149.9 15.2 111 605-717 486-655 (902)
315 3bg1_A Protein SEC13 homolog; 99.3 5.1E-12 1.7E-16 133.5 10.6 109 603-716 146-286 (316)
316 2j04_B YDR362CP, TAU91; beta p 99.3 3.5E-12 1.2E-16 145.1 9.7 105 602-714 261-377 (524)
317 3dwl_C Actin-related protein 2 99.3 5.5E-12 1.9E-16 135.4 10.3 111 606-717 145-276 (377)
318 3ei3_B DNA damage-binding prot 99.3 2.5E-11 8.4E-16 130.9 15.1 104 605-717 161-276 (383)
319 4aez_A CDC20, WD repeat-contai 99.3 3.2E-11 1.1E-15 131.4 15.7 105 603-715 213-328 (401)
320 4a11_B DNA excision repair pro 99.3 2.9E-11 9.8E-16 130.2 14.7 112 603-714 39-166 (408)
321 3lrv_A PRE-mRNA-splicing facto 99.3 1.1E-11 3.7E-16 132.2 11.2 120 580-712 147-280 (343)
322 4e54_B DNA damage-binding prot 99.3 7.8E-12 2.7E-16 138.1 10.0 102 606-716 208-320 (435)
323 3mkq_A Coatomer beta'-subunit; 99.3 3E-11 1E-15 143.4 15.4 104 603-715 9-120 (814)
324 1k8k_C P40, ARP2/3 complex 41 99.3 2.5E-11 8.4E-16 129.4 12.9 104 606-716 7-120 (372)
325 2aq5_A Coronin-1A; WD40 repeat 99.3 3.9E-11 1.3E-15 130.6 14.7 103 603-714 127-245 (402)
326 1pgu_A Actin interacting prote 99.3 3.6E-11 1.2E-15 137.3 14.9 107 602-717 483-608 (615)
327 3vl1_A 26S proteasome regulato 99.2 2.1E-11 7.2E-16 132.7 12.1 99 608-715 98-204 (420)
328 1zth_A RIO1 serine protein kin 99.2 3.2E-12 1.1E-16 131.8 4.5 95 64-172 117-220 (258)
329 3f3f_A Nucleoporin SEH1; struc 99.2 5.1E-11 1.7E-15 124.4 13.7 113 604-716 107-330 (351)
330 3jro_A Fusion protein of prote 99.2 2.4E-11 8.4E-16 144.2 12.6 108 603-716 5-125 (753)
331 3dw8_B Serine/threonine-protei 99.2 4.8E-11 1.6E-15 130.8 14.1 112 603-715 173-308 (447)
332 4gq1_A NUP37; propeller, trans 99.2 6.6E-12 2.2E-16 137.1 6.8 110 605-717 87-212 (393)
333 2xyi_A Probable histone-bindin 99.2 3.9E-11 1.3E-15 132.3 12.8 112 604-716 178-302 (430)
334 1gxr_A ESG1, transducin-like e 99.2 1.2E-10 4.1E-15 121.8 15.9 119 583-716 206-330 (337)
335 3sfz_A APAF-1, apoptotic pepti 99.2 5.7E-11 1.9E-15 148.2 15.6 122 581-715 636-766 (1249)
336 3gre_A Serine/threonine-protei 99.2 4.1E-11 1.4E-15 131.6 12.6 120 591-717 51-195 (437)
337 1yfq_A Cell cycle arrest prote 99.2 5.3E-11 1.8E-15 125.3 13.0 108 604-717 8-125 (342)
338 3sfz_A APAF-1, apoptotic pepti 99.2 7E-11 2.4E-15 147.4 16.2 103 603-714 611-723 (1249)
339 3jrp_A Fusion protein of prote 99.2 8.8E-11 3E-15 125.0 14.6 125 582-716 79-233 (379)
340 1gxr_A ESG1, transducin-like e 99.2 1.7E-10 5.7E-15 120.7 16.3 119 583-715 164-288 (337)
341 3k26_A Polycomb protein EED; W 99.2 3.5E-11 1.2E-15 127.5 11.2 121 580-716 93-253 (366)
342 3i2n_A WD repeat-containing pr 99.2 3.6E-11 1.2E-15 127.1 11.1 126 583-717 191-347 (357)
343 4gga_A P55CDC, cell division c 99.2 1.2E-10 4.2E-15 127.7 15.5 123 581-717 124-255 (420)
344 2xyi_A Probable histone-bindin 99.2 1E-10 3.5E-15 129.0 14.9 107 603-714 227-344 (430)
345 3vu4_A KMHSV2; beta-propeller 99.2 1.7E-10 5.7E-15 124.1 15.6 91 625-716 155-264 (355)
346 2pm9_A Protein WEB1, protein t 99.2 2.3E-11 7.8E-16 131.9 8.8 105 605-717 260-408 (416)
347 1sq9_A Antiviral protein SKI8; 99.2 1.3E-10 4.5E-15 125.2 14.6 123 584-717 209-389 (397)
348 2j04_A TAU60, YPL007P, hypothe 99.2 1E-10 3.5E-15 131.9 13.8 102 609-717 131-249 (588)
349 1k8k_C P40, ARP2/3 complex 41 99.2 1.6E-10 5.6E-15 122.9 14.7 106 604-710 139-262 (372)
350 1r5m_A SIR4-interacting protei 99.2 1.7E-10 5.7E-15 124.8 14.8 102 604-715 244-353 (425)
351 3dw8_B Serine/threonine-protei 99.2 1.3E-10 4.4E-15 127.4 14.0 131 581-717 197-367 (447)
352 2vdu_B TRNA (guanine-N(7)-)-me 99.2 1.4E-10 4.7E-15 128.6 14.1 100 602-711 190-326 (450)
353 3i2n_A WD repeat-containing pr 99.2 5.1E-11 1.7E-15 125.9 10.1 106 605-716 16-141 (357)
354 3mkq_A Coatomer beta'-subunit; 99.2 9.4E-11 3.2E-15 139.1 13.5 122 581-716 34-165 (814)
355 3zwl_B Eukaryotic translation 99.2 3.4E-10 1.2E-14 119.8 16.2 119 585-717 200-340 (369)
356 4aez_A CDC20, WD repeat-contai 99.2 3.1E-10 1.1E-14 123.6 16.1 120 582-716 113-241 (401)
357 3mmy_A MRNA export factor; mRN 99.2 1.4E-10 4.9E-15 122.7 12.7 93 604-705 83-183 (368)
358 1r5m_A SIR4-interacting protei 99.1 1.8E-10 6.3E-15 124.4 13.5 106 607-716 45-173 (425)
359 3odt_A Protein DOA1; ubiquitin 99.1 1.8E-10 6E-15 119.4 12.6 97 606-714 183-287 (313)
360 4ggc_A P55CDC, cell division c 99.1 5E-10 1.7E-14 116.3 15.6 115 603-717 146-309 (318)
361 2oit_A Nucleoporin 214KDA; NH2 99.1 1.7E-10 5.9E-15 127.9 12.7 96 603-707 145-255 (434)
362 4gga_A P55CDC, cell division c 99.1 3E-10 1E-14 124.6 14.4 106 603-717 272-389 (420)
363 3v7d_B Cell division control p 99.1 3E-10 1E-14 125.6 13.8 115 581-711 289-410 (464)
364 2vdu_B TRNA (guanine-N(7)-)-me 99.1 2.2E-10 7.6E-15 126.9 12.6 107 602-717 97-223 (450)
365 3gre_A Serine/threonine-protei 99.1 5.2E-10 1.8E-14 122.7 14.8 102 606-716 167-285 (437)
366 3odt_A Protein DOA1; ubiquitin 99.1 6E-10 2.1E-14 115.3 14.4 110 590-715 6-125 (313)
367 3jro_A Fusion protein of prote 99.1 2E-10 6.9E-15 136.3 12.1 124 581-715 30-181 (753)
368 3v7d_B Cell division control p 99.1 5.1E-10 1.7E-14 123.8 13.9 100 605-716 119-229 (464)
369 2w18_A PALB2, fancn, partner a 99.1 2.9E-10 9.9E-15 120.9 10.8 97 607-709 111-243 (356)
370 4ggc_A P55CDC, cell division c 99.1 1.3E-09 4.4E-14 113.2 15.4 122 581-716 44-174 (318)
371 1sq9_A Antiviral protein SKI8; 99.1 7.4E-10 2.5E-14 119.3 13.7 103 605-717 184-316 (397)
372 4a11_B DNA excision repair pro 99.1 1.2E-09 4E-14 117.5 15.0 105 603-715 95-210 (408)
373 1yfq_A Cell cycle arrest prote 99.1 2.2E-10 7.4E-15 120.7 8.4 97 605-713 54-169 (342)
374 2ovr_B FBW7, F-BOX/WD repeat p 99.0 1.4E-09 4.9E-14 119.9 14.8 116 581-714 298-429 (445)
375 1l0q_A Surface layer protein; 99.0 2.2E-09 7.4E-14 115.6 15.0 117 584-714 14-138 (391)
376 1pgu_A Actin interacting prote 99.0 3.2E-09 1.1E-13 121.0 15.7 119 581-715 182-320 (615)
377 1p22_A F-BOX/WD-repeat protein 99.0 5.3E-09 1.8E-13 115.1 14.8 96 605-715 131-234 (435)
378 1p22_A F-BOX/WD-repeat protein 98.9 6.6E-09 2.3E-13 114.3 15.0 98 603-715 252-357 (435)
379 2ovr_B FBW7, F-BOX/WD repeat p 98.9 5.6E-09 1.9E-13 115.0 14.4 115 581-715 138-260 (445)
380 3bws_A Protein LP49; two-domai 98.9 2.8E-09 9.7E-14 116.4 11.9 120 585-712 147-273 (433)
381 4gyi_A RIO2 kinase; protein ki 98.9 2E-10 6.8E-15 124.4 1.6 90 74-170 162-264 (397)
382 1l0q_A Surface layer protein; 98.9 1.3E-08 4.4E-13 109.5 15.7 119 582-714 54-180 (391)
383 2hqs_A Protein TOLB; TOLB, PAL 98.9 1.1E-08 3.8E-13 112.4 13.2 100 605-713 176-287 (415)
384 3bws_A Protein LP49; two-domai 98.7 5.4E-08 1.9E-12 106.1 12.8 115 585-713 237-365 (433)
385 2hqs_A Protein TOLB; TOLB, PAL 98.5 3.3E-07 1.1E-11 100.6 12.7 101 604-713 219-331 (415)
386 1nir_A Nitrite reductase; hemo 98.5 1.3E-06 4.4E-11 99.6 16.0 96 585-695 162-264 (543)
387 1k32_A Tricorn protease; prote 98.4 9.4E-07 3.2E-11 108.5 13.3 101 603-712 374-491 (1045)
388 1ri6_A Putative isomerase YBHE 98.4 7.8E-07 2.7E-11 92.9 10.1 107 591-710 27-146 (343)
389 2ojh_A Uncharacterized protein 98.4 1.9E-06 6.6E-11 87.3 12.3 99 608-713 129-237 (297)
390 1z68_A Fibroblast activation p 98.3 4.2E-07 1.4E-11 106.5 7.4 96 609-714 61-190 (719)
391 2ojh_A Uncharacterized protein 98.3 8.9E-07 3.1E-11 89.8 8.9 104 603-714 168-293 (297)
392 2ecf_A Dipeptidyl peptidase IV 98.3 1.3E-06 4.4E-11 102.6 11.2 108 607-716 36-175 (741)
393 3tm0_A Aminoglycoside 3'-phosp 98.3 3.5E-07 1.2E-11 93.5 5.0 95 64-168 56-211 (263)
394 1ri6_A Putative isomerase YBHE 98.3 4.3E-06 1.5E-10 87.2 12.3 110 591-712 73-198 (343)
395 3o4h_A Acylamino-acid-releasin 98.3 9.4E-07 3.2E-11 100.9 7.8 98 603-713 190-302 (582)
396 3hfq_A Uncharacterized protein 98.3 1E-05 3.4E-10 85.4 15.0 99 607-711 85-206 (347)
397 3o4h_A Acylamino-acid-releasin 98.2 1.1E-06 3.6E-11 100.5 7.7 94 611-714 153-267 (582)
398 1xfd_A DIP, dipeptidyl aminope 98.2 1.4E-06 4.9E-11 101.8 8.5 98 609-714 62-194 (723)
399 1nir_A Nitrite reductase; hemo 98.2 3.2E-06 1.1E-10 96.3 10.9 89 615-712 145-245 (543)
400 1xfd_A DIP, dipeptidyl aminope 98.2 6.6E-07 2.3E-11 104.6 4.9 98 609-716 18-137 (723)
401 3u4y_A Uncharacterized protein 98.2 1.1E-05 3.8E-10 84.1 13.9 112 587-707 113-235 (331)
402 2ecf_A Dipeptidyl peptidase IV 98.2 2.8E-06 9.6E-11 99.6 9.6 99 608-714 109-230 (741)
403 2z3z_A Dipeptidyl aminopeptida 98.2 1.9E-06 6.4E-11 100.7 7.9 106 606-713 119-278 (706)
404 1z68_A Fibroblast activation p 98.2 7.9E-07 2.7E-11 104.2 4.7 96 611-716 19-133 (719)
405 1pby_B Quinohemoprotein amine 98.2 7.2E-06 2.5E-10 85.2 11.2 78 607-695 240-317 (337)
406 3vgz_A Uncharacterized protein 98.2 1.3E-05 4.6E-10 84.0 13.2 106 591-706 215-327 (353)
407 3dxp_A Putative acyl-COA dehyd 98.1 2E-06 6.9E-11 92.3 6.9 103 63-169 82-247 (359)
408 3u4y_A Uncharacterized protein 98.1 1.5E-05 5.2E-10 83.1 13.4 112 587-712 25-148 (331)
409 1pby_B Quinohemoprotein amine 98.1 5.9E-06 2E-10 85.9 10.1 109 588-709 17-151 (337)
410 2bkl_A Prolyl endopeptidase; m 98.1 4.8E-06 1.6E-10 97.5 9.2 102 605-714 118-248 (695)
411 3vgz_A Uncharacterized protein 98.1 3.4E-05 1.2E-09 80.9 14.3 109 590-711 172-291 (353)
412 4a5s_A Dipeptidyl peptidase 4 98.1 5.1E-06 1.8E-10 98.0 8.6 121 585-715 39-193 (740)
413 1xip_A Nucleoporin NUP159; bet 98.1 2.8E-05 9.7E-10 84.3 13.6 91 607-711 88-181 (388)
414 2z3z_A Dipeptidyl aminopeptida 98.0 6.1E-06 2.1E-10 96.3 8.4 95 608-714 82-202 (706)
415 1jmx_B Amine dehydrogenase; ox 98.0 1.2E-05 4.1E-10 84.1 9.9 92 612-711 4-110 (349)
416 1k32_A Tricorn protease; prote 98.0 1.6E-05 5.5E-10 97.5 11.4 101 603-713 332-441 (1045)
417 1jmx_B Amine dehydrogenase; ox 98.0 2.1E-05 7.1E-10 82.3 10.6 78 607-695 254-332 (349)
418 3hfq_A Uncharacterized protein 98.0 2.2E-05 7.5E-10 82.8 10.7 99 608-713 40-161 (347)
419 3scy_A Hypothetical bacterial 98.0 5.4E-05 1.8E-09 80.3 13.5 105 607-712 154-279 (361)
420 2xdw_A Prolyl endopeptidase; a 97.9 2.2E-05 7.5E-10 92.1 10.7 97 607-712 124-252 (710)
421 3azo_A Aminopeptidase; POP fam 97.9 2.6E-05 8.8E-10 90.2 10.2 105 606-713 128-262 (662)
422 4a5s_A Dipeptidyl peptidase 4 97.9 1.3E-05 4.6E-10 94.4 7.8 92 609-711 18-130 (740)
423 1nd4_A Aminoglycoside 3'-phosp 97.8 6E-06 2E-10 83.6 3.1 91 65-168 61-212 (264)
424 3scy_A Hypothetical bacterial 97.8 8.6E-05 3E-09 78.7 12.0 91 606-701 257-360 (361)
425 2gop_A Trilobed protease; beta 97.7 0.00014 4.9E-09 76.3 11.8 94 608-712 59-189 (347)
426 1jof_A Carboxy-CIS,CIS-muconat 97.7 0.0004 1.4E-08 74.1 14.0 95 606-707 143-269 (365)
427 2oiz_A Aromatic amine dehydrog 97.6 0.00027 9.4E-09 75.7 11.9 82 613-705 259-360 (361)
428 1q7f_A NHL, brain tumor CG1071 97.6 0.00086 2.9E-08 68.3 14.7 93 607-710 163-268 (286)
429 3pe7_A Oligogalacturonate lyas 97.5 0.00028 9.4E-09 75.2 10.8 88 612-708 40-140 (388)
430 1yr2_A Prolyl oligopeptidase; 97.5 0.00013 4.6E-09 85.9 8.8 96 608-713 163-288 (741)
431 2dg1_A DRP35, lactonase; beta 97.5 0.00087 3E-08 69.9 13.9 97 606-711 43-153 (333)
432 3fvz_A Peptidyl-glycine alpha- 97.5 0.0014 4.7E-08 68.9 15.1 97 605-710 140-258 (329)
433 1jof_A Carboxy-CIS,CIS-muconat 97.5 0.00011 3.8E-09 78.5 6.5 94 608-708 40-160 (365)
434 1q7f_A NHL, brain tumor CG1071 97.4 0.0019 6.5E-08 65.7 14.6 103 601-713 23-141 (286)
435 3azo_A Aminopeptidase; POP fam 97.4 0.00034 1.2E-08 80.7 9.7 100 605-710 185-311 (662)
436 3fvz_A Peptidyl-glycine alpha- 97.4 0.002 6.9E-08 67.6 14.4 98 607-714 195-313 (329)
437 3pe7_A Oligogalacturonate lyas 97.3 0.00068 2.3E-08 72.1 10.4 99 606-712 79-208 (388)
438 3c5m_A Oligogalacturonate lyas 97.3 0.00045 1.5E-08 73.5 8.2 96 606-710 34-134 (396)
439 3e5z_A Putative gluconolactona 97.3 0.0013 4.4E-08 67.6 11.4 93 607-709 27-131 (296)
440 3sg8_A APH(2'')-ID; antibiotic 97.2 0.00021 7.2E-09 74.6 4.4 103 63-169 56-222 (304)
441 1qks_A Cytochrome CD1 nitrite 97.2 0.0024 8.2E-08 72.8 13.2 93 589-696 184-283 (567)
442 3c5m_A Oligogalacturonate lyas 97.1 0.0013 4.4E-08 69.8 9.8 93 609-712 239-370 (396)
443 2yle_A Protein spire homolog 1 97.1 0.0019 6.4E-08 63.6 9.4 59 104-162 32-91 (229)
444 1xip_A Nucleoporin NUP159; bet 97.0 0.0027 9.1E-08 68.8 11.5 86 607-708 126-229 (388)
445 3r70_A Aminoglycoside phosphot 97.0 0.0006 2.1E-08 71.7 6.0 94 64-168 74-235 (320)
446 2oiz_A Aromatic amine dehydrog 96.9 0.0014 4.6E-08 70.2 7.9 89 590-694 39-146 (361)
447 3tdw_A Gentamicin resistance p 96.9 0.0013 4.5E-08 68.7 7.6 101 63-169 55-223 (306)
448 3iuj_A Prolyl endopeptidase; h 96.9 0.0024 8.1E-08 74.6 9.9 92 607-708 128-249 (693)
449 3dsm_A Uncharacterized protein 96.8 0.0057 2E-07 64.2 11.1 110 587-712 69-191 (328)
450 3e5z_A Putative gluconolactona 96.7 0.007 2.4E-07 61.9 10.7 92 607-707 171-271 (296)
451 1rwi_B Serine/threonine-protei 96.6 0.015 5E-07 58.2 12.8 98 608-713 150-254 (270)
452 2gop_A Trilobed protease; beta 96.6 0.0084 2.9E-07 62.5 10.9 91 608-713 15-124 (347)
453 2dg1_A DRP35, lactonase; beta 96.4 0.032 1.1E-06 57.8 13.9 98 607-711 86-201 (333)
454 3g4e_A Regucalcin; six bladed 96.3 0.02 6.9E-07 58.8 11.5 94 608-705 149-254 (297)
455 3no2_A Uncharacterized protein 96.3 0.016 5.5E-07 59.4 10.4 82 618-711 4-95 (276)
456 3no2_A Uncharacterized protein 96.2 0.027 9.1E-07 57.7 11.8 93 608-710 125-230 (276)
457 3sjl_D Methylamine dehydrogena 96.2 0.01 3.4E-07 64.1 8.7 92 588-695 65-176 (386)
458 1rwi_B Serine/threonine-protei 96.0 0.04 1.4E-06 54.9 11.8 98 608-713 108-212 (270)
459 3dsm_A Uncharacterized protein 96.0 0.027 9.1E-07 59.0 10.8 91 609-710 173-285 (328)
460 1pjx_A Dfpase, DIISOPROPYLFLUO 96.0 0.032 1.1E-06 57.0 10.9 101 608-713 18-137 (314)
461 2qe8_A Uncharacterized protein 95.9 0.052 1.8E-06 57.1 12.5 87 605-693 64-159 (343)
462 2mad_H Methylamine dehydrogena 95.9 0.033 1.1E-06 59.7 10.9 88 610-705 269-367 (373)
463 1qks_A Cytochrome CD1 nitrite 95.8 0.036 1.2E-06 63.1 11.3 86 615-709 163-260 (567)
464 2mad_H Methylamine dehydrogena 95.7 0.082 2.8E-06 56.6 13.1 90 588-694 53-162 (373)
465 3ovc_A Hygromycin-B 4-O-kinase 95.6 0.005 1.7E-07 66.0 3.3 29 140-168 213-241 (362)
466 4gkh_A Aminoglycoside 3'-phosp 95.5 0.017 5.9E-07 58.4 6.7 94 66-168 68-221 (272)
467 3ats_A Putative uncharacterize 95.5 0.0081 2.8E-07 63.8 4.2 30 140-169 222-251 (357)
468 3hrp_A Uncharacterized protein 95.5 0.12 4.1E-06 56.0 13.6 93 608-710 131-237 (409)
469 2z2n_A Virginiamycin B lyase; 95.5 0.26 8.8E-06 49.4 15.3 97 606-712 13-118 (299)
470 1mda_H Methylamine dehydrogena 95.3 0.037 1.3E-06 59.4 8.8 75 613-695 269-353 (368)
471 2z2n_A Virginiamycin B lyase; 95.2 0.33 1.1E-05 48.6 15.3 96 607-712 56-160 (299)
472 3g4e_A Regucalcin; six bladed 95.1 0.24 8.1E-06 50.6 14.0 93 607-711 12-116 (297)
473 2bkl_A Prolyl endopeptidase; m 95.1 0.12 4.2E-06 59.9 13.1 96 606-712 225-338 (695)
474 1pjx_A Dfpase, DIISOPROPYLFLUO 95.1 0.1 3.5E-06 53.1 10.9 74 608-689 226-300 (314)
475 2xdw_A Prolyl endopeptidase; a 95.0 0.13 4.3E-06 59.9 12.8 106 606-713 231-356 (710)
476 2ghs_A AGR_C_1268P; regucalcin 94.9 0.19 6.6E-06 52.2 12.6 92 608-711 49-152 (326)
477 2iwa_A Glutamine cyclotransfer 94.5 0.3 1E-05 49.8 12.4 92 590-695 7-102 (266)
478 2ghs_A AGR_C_1268P; regucalcin 94.5 0.45 1.5E-05 49.4 14.2 94 608-705 179-284 (326)
479 3c75_H MADH, methylamine dehyd 94.4 0.11 3.9E-06 56.7 9.6 93 588-696 105-217 (426)
480 3dr2_A Exported gluconolactona 94.3 0.36 1.2E-05 49.4 12.8 92 607-709 44-147 (305)
481 2qc5_A Streptogramin B lactona 94.2 0.88 3E-05 45.3 15.4 96 607-712 19-123 (300)
482 2qe8_A Uncharacterized protein 94.2 0.21 7.1E-06 52.4 10.9 102 609-711 196-309 (343)
483 2q83_A YTAA protein; 2635576, 94.1 0.056 1.9E-06 56.4 6.2 29 140-168 222-250 (346)
484 3nol_A Glutamine cyclotransfer 94.0 0.72 2.5E-05 46.6 13.8 91 590-695 29-123 (262)
485 3c75_H MADH, methylamine dehyd 93.8 0.09 3.1E-06 57.4 7.3 84 612-703 323-417 (426)
486 2xe4_A Oligopeptidase B; hydro 93.5 0.15 5.1E-06 59.9 9.1 93 609-711 175-289 (751)
487 2qc5_A Streptogramin B lactona 92.9 1.6 5.6E-05 43.3 14.7 95 607-711 61-164 (300)
488 1yr2_A Prolyl oligopeptidase; 92.8 0.14 4.8E-06 59.9 7.3 55 658-714 164-229 (741)
489 3dr2_A Exported gluconolactona 92.8 0.46 1.6E-05 48.6 10.4 92 608-710 131-256 (305)
490 3hrp_A Uncharacterized protein 92.6 0.51 1.7E-05 51.0 11.0 94 613-713 176-288 (409)
491 1kb0_A Quinohemoprotein alcoho 92.5 0.18 6.3E-06 58.4 7.8 58 629-695 457-514 (677)
492 2hz6_A Endoplasmic reticulum t 92.4 0.083 2.9E-06 56.3 4.4 67 618-694 8-74 (369)
493 3mbr_X Glutamine cyclotransfer 92.3 2.5 8.4E-05 42.2 14.6 90 591-695 8-101 (243)
494 3nok_A Glutaminyl cyclase; bet 92.1 1.9 6.5E-05 43.7 13.6 90 591-695 42-132 (268)
495 1mda_H Methylamine dehydrogena 91.8 0.2 6.8E-06 53.6 6.4 85 588-688 52-158 (368)
496 3sjl_D Methylamine dehydrogena 91.8 0.38 1.3E-05 51.7 8.6 76 612-695 284-370 (386)
497 1yiq_A Quinohemoprotein alcoho 91.7 0.22 7.5E-06 57.9 7.0 58 628-694 454-511 (689)
498 2pyw_A Uncharacterized protein 90.8 0.14 4.7E-06 55.7 3.9 30 138-168 230-259 (420)
499 2p4o_A Hypothetical protein; p 90.8 6.6 0.00023 39.8 16.7 87 589-691 19-107 (306)
500 1fwx_A Nitrous oxide reductase 89.4 0.59 2E-05 52.8 7.6 79 609-688 278-361 (595)
No 1
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=7.1e-46 Score=390.57 Aligned_cols=211 Identities=14% Similarity=0.149 Sum_probs=172.7
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|+.+|++++|||||++|+++.........+|+|||| .||+|.++|.+.+ .+++.+++.|++||+.||+|||++|
T Consensus 71 ~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvmEy~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~ylH~~~ 149 (290)
T 3fpq_A 71 RFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFK-VMKIKVLRSWCRQILKGLQFLHTRT 149 (290)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHTSS
T ss_pred HHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEEeCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 4457888999999999999999433322333468999999 8999999996543 4999999999999999999999998
Q ss_pred --ceeccCCCCcEEEc-cCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCC
Q 004998 142 --IVVHNVRPSCFVMS-SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 142 --IvHrDLKP~NILl~-~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
||||||||+||||+ .+|.+||+|||+|+.....
T Consensus 150 ~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~~-------------------------------------------- 185 (290)
T 3fpq_A 150 PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS-------------------------------------------- 185 (290)
T ss_dssp SCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCTT--------------------------------------------
T ss_pred CCEEecccChhheeEECCCCCEEEEeCcCCEeCCCC--------------------------------------------
Confidence 99999999999998 4789999888887321000
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhh
Q 004998 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
.....+||+.|||||++.+ .|+.++||||||
T Consensus 186 ------------------------------------------------~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlG 216 (290)
T 3fpq_A 186 ------------------------------------------------FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFG 216 (290)
T ss_dssp ------------------------------------------------SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHH
T ss_pred ------------------------------------------------ccCCcccCccccCHHHcCC-CCCcHHHHHHHH
Confidence 0012579999999999976 499999999999
Q ss_pred hhhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 299 VLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|+||||+| ||.........+..+..+..|+.+....+ ...+||.+||++||++|||+.|+|+||||++.
T Consensus 217 vilyelltg~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~Hp~~~~~ 289 (290)
T 3fpq_A 217 MCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQEE 289 (290)
T ss_dssp HHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC--
T ss_pred HHHHHHHHCCCCCCCCCcHHHHHHHHHcCCCCCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcCccccCC
Confidence 99999999 78766666677777777777776665554 45599999999999999999999999999863
No 2
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=8.7e-46 Score=392.49 Aligned_cols=227 Identities=25% Similarity=0.394 Sum_probs=176.0
Q ss_pred eeeehhhhcccCCCCCceecccceeecCC--------CCCcEEEEEec-CCCCHHHHHhCCCC--CCCHHHHHHHHHHHH
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEA--------AIDPFVHAIEW-GDVSLRQWLDKPKR--SVDVYECLHIFRQIV 131 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~--------~~~~~~lv~E~-~ggsL~~~L~~~~~--~l~~~~~~~i~~QIl 131 (720)
+..+|+.+|++++|||||++|+++...+. ....+|+|||| .|++|.++|..... ..++..++.|+.||+
T Consensus 49 ~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~ 128 (299)
T 4g31_A 49 KVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIA 128 (299)
T ss_dssp HHHHHHHHHTTCCCTTBCCEEEEEEEEC----------CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHH
Confidence 44578999999999999999995443332 12247999999 89999999965432 245677999999999
Q ss_pred HHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccc
Q 004998 132 EIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQ 211 (720)
Q Consensus 132 ~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfg 211 (720)
.||+|||++|||||||||+||||+.++.+||+|||+|+.......... ..
T Consensus 129 ~al~ylH~~~IiHRDlKp~NILl~~~~~vKl~DFGla~~~~~~~~~~~-----------------------------~~- 178 (299)
T 4g31_A 129 EAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQT-----------------------------VL- 178 (299)
T ss_dssp HHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCCCC-------------------------------------------
T ss_pred HHHHHHHHCcCccccCcHHHeEECCCCcEEEccCccceecCCCccccc-----------------------------cc-
Confidence 999999999999999999999999999999999998865432211000 00
Q ss_pred cccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCcc
Q 004998 212 LVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCA 291 (720)
Q Consensus 212 la~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~ 291 (720)
. ........+..+||+.|||||++.+..|+.+
T Consensus 179 -~-----------------------------------------------~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~ 210 (299)
T 4g31_A 179 -T-----------------------------------------------PMPAYARHTGQVGTKLYMSPEQIHGNSYSHK 210 (299)
T ss_dssp -------------------------------------------------------------CCCTTSCHHHHTTCCCCTH
T ss_pred -c-----------------------------------------------ccccccccCCcccCccccCHHHHcCCCCCCH
Confidence 0 0000001123589999999999999999999
Q ss_pred ccchhhhhhhhhccccCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 292 SDIYRLGVLLFELFCPFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 292 sDIwSLGvll~eLltpf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
+|||||||+||||++||....+....+..+....+|+.+....|...+||.+||++||.+|||+.|+|+||||++.
T Consensus 211 ~DiwSlGvilyell~Pf~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~ 286 (299)
T 4g31_A 211 VDIFSLGLILFELLYPFSTQMERVRTLTDVRNLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIENAVFEDL 286 (299)
T ss_dssp HHHHHHHHHHHHHHSCCSSHHHHHHHHHHHHTTCCCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGCCC
T ss_pred HHHHHHHHHHHHHccCCCCccHHHHHHHHHhcCCCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhCCC
Confidence 9999999999999999987766666777777788888777778888899999999999999999999999999876
No 3
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=7e-45 Score=390.97 Aligned_cols=240 Identities=16% Similarity=0.262 Sum_probs=184.5
Q ss_pred CcccccccccC-------CCCCCccccccccccCCCCccceeeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEe
Q 004998 29 SRALNISGVSD-------RNPRLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIE 101 (720)
Q Consensus 29 ~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E 101 (720)
.+.+|.|+++. .+.+.++++.+...... ..-+..+|+.+|++++|||||++++ +++++. .+|+|||
T Consensus 79 ~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~---~~~~~~~Ei~il~~l~HpnIV~l~~-~~~~~~---~~~ivmE 151 (346)
T 4fih_A 79 FIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ---RRELLFNEVVIMRDYQHENVVEMYN-SYLVGD---ELWVVME 151 (346)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCS---SGGGGHHHHHHHHHCCCTTBCCEEE-EEEETT---EEEEEEC
T ss_pred eEEeecCcCeEEEEEEECCCCCEEEEEEEecCchh---HHHHHHHHHHHHHhCCCCCCCcEEE-EEEECC---EEEEEEe
Confidence 34466666655 33444555555443322 1223347888999999999999999 565554 6899999
Q ss_pred c-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCccccc
Q 004998 102 W-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGL 180 (720)
Q Consensus 102 ~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~ 180 (720)
| .||+|.+++.+. .+++.+++.|++||+.||+|||++|||||||||+||||+.+|++||+|||+|+......
T Consensus 152 y~~gg~L~~~l~~~--~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~----- 224 (346)
T 4fih_A 152 FLEGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV----- 224 (346)
T ss_dssp CCTTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSS-----
T ss_pred CCCCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEECCCCCEEEecCcCceecCCCC-----
Confidence 9 899999999653 39999999999999999999999999999999999999999999999998874331110
Q ss_pred ccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcc
Q 004998 181 NTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEK 260 (720)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~ 260 (720)
+
T Consensus 225 ----------------------------~--------------------------------------------------- 225 (346)
T 4fih_A 225 ----------------------------P--------------------------------------------------- 225 (346)
T ss_dssp ----------------------------C---------------------------------------------------
T ss_pred ----------------------------C---------------------------------------------------
Confidence 0
Q ss_pred cCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhccc---cCCCCchHHHHHHHhhcCCCC-cccccc-Cc
Q 004998 261 KQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLP-PQLLLK-FP 335 (720)
Q Consensus 261 ~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p-~~~~~~-~p 335 (720)
.....+||++|||||++.+..|+.++|||||||+||||++ ||...... ..+..+.....+ ...... .+
T Consensus 226 ------~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~-~~~~~i~~~~~~~~~~~~~~s~ 298 (346)
T 4fih_A 226 ------RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL-KAMKMIRDNLPPRLKNLHKVSP 298 (346)
T ss_dssp ------CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-HHHHHHHHSSCCCCSCGGGSCH
T ss_pred ------cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH-HHHHHHHcCCCCCCCccccCCH
Confidence 0012589999999999999999999999999999999999 77665544 445555544322 222233 34
Q ss_pred hHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004998 336 KEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 336 ~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
...+||.+||.+||++|||+.|+|+||||++..
T Consensus 299 ~~~dli~~~L~~dP~~R~ta~e~l~Hp~~~~~~ 331 (346)
T 4fih_A 299 SLKGFLDRLLVRDPAQRATAAELLKHPFLAKAG 331 (346)
T ss_dssp HHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCC
T ss_pred HHHHHHHHHcCCChhHCcCHHHHhcCHhhcCCC
Confidence 556999999999999999999999999998763
No 4
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=2e-45 Score=395.78 Aligned_cols=245 Identities=17% Similarity=0.208 Sum_probs=183.9
Q ss_pred cCCcccccccccC-------CCCCCccccccccccCCCCccceeeeehhhhcccCCCCCceecccceeecCCCCCcEEEE
Q 004998 27 DSSRALNISGVSD-------RNPRLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHA 99 (720)
Q Consensus 27 ~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv 99 (720)
...+.+|.|+++. .+.+.++++.+..... ......+..+|+.+|++++|||||++++ +++++. .+|+|
T Consensus 27 ~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~-~~~~~~~~~~E~~il~~l~HpnIV~~~~-~~~~~~---~~yiV 101 (350)
T 4b9d_A 27 VRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRM-SSKEREESRREVAVLANMKHPNIVQYRE-SFEENG---SLYIV 101 (350)
T ss_dssp EEEEEC------CEEEEEETTTCCEEEEEEEECTTS-CHHHHHHHHHHHHHHHHCCCTTBCCEEE-EEEETT---EEEEE
T ss_pred EEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHC-CHHHHHHHHHHHHHHHHCCCCCCCcEEE-EEEECC---EEEEE
Confidence 3445566666655 3334444444433221 1222234458899999999999999999 555543 68999
Q ss_pred Eec-CCCCHHHHHh-CCCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcc
Q 004998 100 IEW-GDVSLRQWLD-KPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHE 177 (720)
Q Consensus 100 ~E~-~ggsL~~~L~-~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~ 177 (720)
||| .||+|.++|. +.+..+++.+++.|+.||+.||+|||++|||||||||+||||+.+|++||+|||+++......
T Consensus 102 mEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~-- 179 (350)
T 4b9d_A 102 MDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTV-- 179 (350)
T ss_dssp EECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHHH--
T ss_pred EeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCCEEEcccccceeecCCc--
Confidence 999 8999999994 344558999999999999999999999999999999999999999999999888874321000
Q ss_pred cccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhh
Q 004998 178 EGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQV 257 (720)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~ 257 (720)
+
T Consensus 180 -------------------------------~------------------------------------------------ 180 (350)
T 4b9d_A 180 -------------------------------E------------------------------------------------ 180 (350)
T ss_dssp -------------------------------H------------------------------------------------
T ss_pred -------------------------------c------------------------------------------------
Confidence 0
Q ss_pred hcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhccc---cCCCCchHHHHHHHhhcCCCCccccccC
Q 004998 258 EEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF 334 (720)
Q Consensus 258 ~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~ 334 (720)
.....+||+.|||||++.+..|+.++|||||||+||||++ ||...... ..+..+..+.+|+......
T Consensus 181 ---------~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~-~~~~~i~~~~~~~~~~~~s 250 (350)
T 4b9d_A 181 ---------LARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMK-NLVLKIISGSFPPVSLHYS 250 (350)
T ss_dssp ---------HHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHTCCCCCCTTSC
T ss_pred ---------cccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH-HHHHHHHcCCCCCCCccCC
Confidence 0012579999999999999999999999999999999999 78766554 4455555555554433334
Q ss_pred chHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 335 PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 335 p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
+...+||.+||++||++|||+.|+|+||||+..
T Consensus 251 ~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~~ 283 (350)
T 4b9d_A 251 YDLRSLVSQLFKRNPRDRPSVNSILEKGFIAKR 283 (350)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHTT
T ss_pred HHHHHHHHHHccCChhHCcCHHHHhcCHHhhcC
Confidence 455699999999999999999999999999865
No 5
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=3.4e-45 Score=382.24 Aligned_cols=206 Identities=18% Similarity=0.276 Sum_probs=163.6
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
+..+|..+|++++|||||++++ +++++. .+|+||||.+|+|.++|.+.+ .+++.+++.|++||+.||+|||++||
T Consensus 59 ~~~~Ei~il~~l~HpnIv~~~~-~~~~~~---~~~ivmEy~~g~L~~~l~~~~-~l~e~~~~~~~~qi~~al~ylH~~~I 133 (275)
T 3hyh_A 59 RIEREISYLRLLRHPHIIKLYD-VIKSKD---EIIMVIEYAGNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCHRHKI 133 (275)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EEECSS---EEEEEEECCCEEHHHHHHHSC-SCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHCCCCCCCeEEE-EEEECC---EEEEEEeCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 4558888999999999999999 665554 689999998899999996554 49999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
|||||||+|||++.++++||+|||+|+......
T Consensus 134 iHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~----------------------------------------------- 166 (275)
T 3hyh_A 134 VHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN----------------------------------------------- 166 (275)
T ss_dssp CCCCCCTTTEEECTTCCEEECCSSCC------------------------------------------------------
T ss_pred ccccCChHHeEECCCCCEEEeecCCCeecCCCC-----------------------------------------------
Confidence 999999999999999999999888874321100
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCC-Cccccchhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYRLGVLL 301 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~-s~~sDIwSLGvll 301 (720)
.....+||+.|||||++.+..| ++++|||||||++
T Consensus 167 --------------------------------------------~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvil 202 (275)
T 3hyh_A 167 --------------------------------------------FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVIL 202 (275)
T ss_dssp ----------------------------------------------------CTTSCHHHHSSSSCCCTHHHHHHHHHHH
T ss_pred --------------------------------------------ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHH
Confidence 0011479999999999998886 6899999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|||++ ||...... ..+..+....++ ++... +...+||.+||++||++|||++|+|+||||+..
T Consensus 203 y~lltg~~PF~~~~~~-~~~~~i~~~~~~--~p~~~s~~~~~li~~~L~~dP~~R~s~~eil~hpw~k~~ 269 (275)
T 3hyh_A 203 YVMLCRRLPFDDESIP-VLFKNISNGVYT--LPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKVD 269 (275)
T ss_dssp HHHHHSSCSSCCSSHH-HHHHHHHHTCCC--CCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHCHHHHTT
T ss_pred HHHHHCCCCCCCCCHH-HHHHHHHcCCCC--CCCCCCHHHHHHHHHHccCChhHCcCHHHHHcCcccccC
Confidence 99999 77665443 455555554332 22233 445599999999999999999999999999754
No 6
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=2.1e-45 Score=389.38 Aligned_cols=246 Identities=17% Similarity=0.205 Sum_probs=184.7
Q ss_pred ccCCcccccccccC-------CCCCCccccccccccCCCCccceeeeehhhhcccCCCCCceecccceeecCCCCCcEEE
Q 004998 26 SDSSRALNISGVSD-------RNPRLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVH 98 (720)
Q Consensus 26 ~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~l 98 (720)
....+.+|.|+++. .+.+..+.+.+...........-+..+|+.+|++++|||||++++ +++++. .+|+
T Consensus 34 y~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~-~~~~~~---~~yi 109 (311)
T 4aw0_A 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF-TFQDDE---KLYF 109 (311)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEE-EEECSS---EEEE
T ss_pred cEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEE-EEEeCC---EEEE
Confidence 33445667776665 223333433332211111122234457888999999999999999 666654 6899
Q ss_pred EEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcc
Q 004998 99 AIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHE 177 (720)
Q Consensus 99 v~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~ 177 (720)
|||| .||+|.++|.+.+ .+++.+++.|+.||+.||+|||++|||||||||+||||+.+|++||+|||+|+........
T Consensus 110 vmEy~~gG~L~~~i~~~~-~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~ 188 (311)
T 4aw0_A 110 GLSYAKNGELLKYIRKIG-SFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 188 (311)
T ss_dssp EECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTC
T ss_pred EEecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCc
Confidence 9999 8999999996544 4999999999999999999999999999999999999999999999999888543211000
Q ss_pred cccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhh
Q 004998 178 EGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQV 257 (720)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~ 257 (720)
T Consensus 189 -------------------------------------------------------------------------------- 188 (311)
T 4aw0_A 189 -------------------------------------------------------------------------------- 188 (311)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhccc---cCCCCchHHHHHHHhhcCCCCccccc-c
Q 004998 258 EEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL-K 333 (720)
Q Consensus 258 ~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~-~ 333 (720)
......+||+.|||||++.+..|+.++|||||||+||||++ ||...+.. ..+..+.+..+. ++. .
T Consensus 189 --------~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~-~~~~~i~~~~~~--~p~~~ 257 (311)
T 4aw0_A 189 --------ARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEG-LIFAKIIKLEYD--FPEKF 257 (311)
T ss_dssp --------CCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHTCCC--CCTTC
T ss_pred --------ccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHcCCCC--CCccc
Confidence 00112589999999999999999999999999999999999 78765544 444455443321 222 3
Q ss_pred CchHHHHHHHcCCCCCCCCCChHH------HHcCcccCCC
Q 004998 334 FPKEASFCLWLLHPEPSGRPKMGE------LLQSEFLNEP 367 (720)
Q Consensus 334 ~p~~~~li~~~L~~dP~~Rpta~e------iL~hp~~~~~ 367 (720)
++...+||.+||.+||++|||++| |++||||+..
T Consensus 258 s~~~~dli~~lL~~dp~~R~t~~e~~~~~~i~~Hp~F~~i 297 (311)
T 4aw0_A 258 FPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 297 (311)
T ss_dssp CHHHHHHHHHHSCSSGGGSTTSGGGTCHHHHHTSGGGTTC
T ss_pred CHHHHHHHHHHccCCHhHCcChHHHcCCHHHHCCCCcCCC
Confidence 345569999999999999999988 5899999986
No 7
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=6.7e-44 Score=392.57 Aligned_cols=242 Identities=16% Similarity=0.273 Sum_probs=185.1
Q ss_pred cCCcccccccccC-------CCCCCccccccccccCCCCccceeeeehhhhcccCCCCCceecccceeecCCCCCcEEEE
Q 004998 27 DSSRALNISGVSD-------RNPRLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHA 99 (720)
Q Consensus 27 ~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv 99 (720)
...+.+|.|+++. .+.+.++++.+..... ...-+..+|+.+|++++|||||++|+ +++++. .+|||
T Consensus 154 ~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~---~~~~~~~~Ei~il~~l~HpnIV~l~~-~~~~~~---~~~iV 226 (423)
T 4fie_A 154 DNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ---QRRELLFNEVVIMRDYQHENVVEMYN-SYLVGD---ELWVV 226 (423)
T ss_dssp EEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTC---SSGGGHHHHHHHHHHCCCTTBCCEEE-EEEETT---EEEEE
T ss_pred EeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccch---hHHHHHHHHHHHHHhCCCCCCCceEE-EEEECC---EEEEE
Confidence 3345566666655 2334455555543322 11223347888999999999999999 565554 68999
Q ss_pred Eec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCccc
Q 004998 100 IEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEE 178 (720)
Q Consensus 100 ~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~ 178 (720)
||| .||+|.+++... .+++.+++.|++||+.||+|||++|||||||||+||||+.+|++||+|||+|+......
T Consensus 227 mEy~~gG~L~~~i~~~--~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~--- 301 (423)
T 4fie_A 227 MEFLEGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV--- 301 (423)
T ss_dssp EECCTTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSC---
T ss_pred EeCCCCCcHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEecCccceECCCCC---
Confidence 999 899999999643 39999999999999999999999999999999999999999999999998884331110
Q ss_pred ccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhh
Q 004998 179 GLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVE 258 (720)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~ 258 (720)
.
T Consensus 302 ------------------------------~------------------------------------------------- 302 (423)
T 4fie_A 302 ------------------------------P------------------------------------------------- 302 (423)
T ss_dssp ------------------------------C-------------------------------------------------
T ss_pred ------------------------------c-------------------------------------------------
Confidence 0
Q ss_pred cccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhccc---cCCCCchHHHHHHHhhcCCCCc-cccccC
Q 004998 259 EKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPP-QLLLKF 334 (720)
Q Consensus 259 ~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~-~~~~~~ 334 (720)
.....+||++|||||++.+..|+.++|||||||++|||++ ||...... ..+..+.....+. .....+
T Consensus 303 --------~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~-~~~~~i~~~~~~~~~~~~~~ 373 (423)
T 4fie_A 303 --------RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL-KAMKMIRDNLPPRLKNLHKV 373 (423)
T ss_dssp --------CBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-HHHHHHHHSCCCCCSCTTSS
T ss_pred --------cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH-HHHHHHHcCCCCCCcccccC
Confidence 0012589999999999999999999999999999999999 77665544 4455555443222 222333
Q ss_pred -chHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004998 335 -PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 335 -p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
+...+||.+||.+||.+|||+.|+|+||||+...
T Consensus 374 s~~~~dli~~~L~~dP~~R~ta~ell~Hp~~~~~~ 408 (423)
T 4fie_A 374 SPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAG 408 (423)
T ss_dssp CHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCC
T ss_pred CHHHHHHHHHHcCCChhHCcCHHHHhcCHHhcCCC
Confidence 4556999999999999999999999999998763
No 8
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=3.8e-44 Score=379.42 Aligned_cols=208 Identities=18% Similarity=0.248 Sum_probs=165.1
Q ss_pred eeeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004998 62 LRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 62 ~r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
.+..+|+.+|++++|||||++++ +++++. .+|+|||| .||+|.++|.+.+ .+++.+++.|++||+.||+|||++
T Consensus 71 ~~~~~E~~il~~l~HpnIv~l~~-~~~~~~---~~~ivmEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~aL~ylH~~ 145 (304)
T 3ubd_A 71 VRTKMERDILVEVNHPFIVKLHY-AFQTEG---KLYLILDFLRGGDLFTRLSKEV-MFTEEDVKFYLAELALALDHLHSL 145 (304)
T ss_dssp C------CCCCCCCCTTEECEEE-EEEETT---EEEEEECCCTTCEEHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHCCCCCCCeEEE-EEEECC---EEEEEEEcCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC
Confidence 35557888999999999999999 665553 68999999 9999999996544 499999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004998 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
|||||||||+|||++.+|++||+|||+|+......
T Consensus 146 ~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~--------------------------------------------- 180 (304)
T 3ubd_A 146 GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE--------------------------------------------- 180 (304)
T ss_dssp TCCCSSCCGGGEEECTTSCEEEESSEEEEC--------------------------------------------------
T ss_pred CCcCCCCCHHHeEEcCCCCEEecccccceeccCCC---------------------------------------------
Confidence 99999999999999999999999888874321100
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhh
Q 004998 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
......+||+.|||||++.+..|+.++|||||||+
T Consensus 181 ---------------------------------------------~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvi 215 (304)
T 3ubd_A 181 ---------------------------------------------KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVL 215 (304)
T ss_dssp ---------------------------------------------CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHH
T ss_pred ---------------------------------------------ccccccccCcccCCHHHhccCCCCCCCcccchHHH
Confidence 00012579999999999999999999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCccccc-cCchHHHHHHHcCCCCCCCCCCh-----HHHHcCcccCCC
Q 004998 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPKM-----GELLQSEFLNEP 367 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~-~~p~~~~li~~~L~~dP~~Rpta-----~eiL~hp~~~~~ 367 (720)
||||++ ||...+.. ..+..+.+..++ ++. ..+...+||.+||++||++|||+ +|+++||||+..
T Consensus 216 lyemltG~~PF~~~~~~-~~~~~i~~~~~~--~p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~Hp~f~~i 288 (304)
T 3ubd_A 216 MFEMLTGTLPFQGKDRK-ETMTMILKAKLG--MPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTI 288 (304)
T ss_dssp HHHHHHSSCSSCCSSHH-HHHHHHHHCCCC--CCTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTSGGGTTC
T ss_pred HHHHHhCCCCCCCcCHH-HHHHHHHcCCCC--CCCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcCccccCC
Confidence 999999 78766554 444444443322 222 33455699999999999999984 799999999986
No 9
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=9.4e-44 Score=381.01 Aligned_cols=215 Identities=16% Similarity=0.101 Sum_probs=167.5
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..+|++++|||||++|+ +++++. .+|+|||| .||+|.++|++.+ .+++.+++.|+.||+.||+|||++|||
T Consensus 98 ~~E~~il~~l~HpnIV~l~~-~~~~~~---~~~ivmEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~aL~ylH~~~Ii 172 (336)
T 4g3f_A 98 VEELVACAGLSSPRIVPLYG-AVREGP---WVNIFMELLEGGSLGQLIKQMG-CLPEDRALYYLGQALEGLEYLHTRRIL 172 (336)
T ss_dssp THHHHTTTTCCCTTBCCEEE-EEEETT---EEEEEECCCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHTTTEE
T ss_pred HHHHHHHHhCCCCCCCcEEE-EEEECC---EEEEEEeccCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCce
Confidence 36888999999999999999 565553 68999999 8999999996544 499999999999999999999999999
Q ss_pred eccCCCCcEEEccCC-ceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 144 VHNVRPSCFVMSSFN-HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 144 HrDLKP~NILl~~~~-~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
||||||+||||+.+| ++||+|||+|+........ +
T Consensus 173 HRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~------------------------------------~-------- 208 (336)
T 4g3f_A 173 HGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLG------------------------------------K-------- 208 (336)
T ss_dssp CSCCCGGGEEECTTSCCEEECCCTTCEEC---------------------------------------------------
T ss_pred ecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcc------------------------------------c--------
Confidence 999999999999887 6999999888543221000 0
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
........+||+.|||||++.+..|+.++|||||||+||
T Consensus 209 -----------------------------------------~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvily 247 (336)
T 4g3f_A 209 -----------------------------------------SLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMML 247 (336)
T ss_dssp ----------------------------------------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHH
T ss_pred -----------------------------------------ceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHH
Confidence 000011257999999999999999999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCCCC-ccccccCchH-HHHHHHcCCCCCCCCCChHHH-------------HcCccc
Q 004998 303 ELFC---PFSTGEEKTRTMSSLRHRVLP-PQLLLKFPKE-ASFCLWLLHPEPSGRPKMGEL-------------LQSEFL 364 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~~~p-~~~~~~~p~~-~~li~~~L~~dP~~Rpta~ei-------------L~hp~~ 364 (720)
||++ ||...... ..+..+.....+ ..++..++.. .+||.+||++||.+|||+.|+ |+|||+
T Consensus 248 emltG~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~~l~hPw~ 326 (336)
T 4g3f_A 248 HMLNGCHPWTQYFRG-PLCLKIASEPPPIREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVGGLKSPWK 326 (336)
T ss_dssp HHHHSSCSSTTTCCS-CCHHHHHHSCCGGGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTTSSCSCSS
T ss_pred HHHHCcCCCCCCCHH-HHHHHHHcCCCCchhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhhhccCCCc
Confidence 9999 77654433 223333333322 2334445544 599999999999999999997 569999
Q ss_pred CCCccc
Q 004998 365 NEPRDS 370 (720)
Q Consensus 365 ~~~~~~ 370 (720)
.+..++
T Consensus 327 ~~~~~P 332 (336)
T 4g3f_A 327 GEYKEP 332 (336)
T ss_dssp SSCCCC
T ss_pred CCCCCC
Confidence 887554
No 10
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.8e-43 Score=386.31 Aligned_cols=221 Identities=15% Similarity=0.161 Sum_probs=168.5
Q ss_pred eeeehhhhcccCCCCCceecccceeecC---CCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENE---AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~---~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
+..+|+.+|++++|||||++++ ++... .....+|+||||.+|+|.++|.+.+ .+++.+++.|++||+.||.|||+
T Consensus 99 ~~~~Ei~il~~l~HpnIv~l~~-~~~~~~~~~~~~~~~ivmE~~~g~L~~~i~~~~-~l~~~~~~~~~~qil~al~ylH~ 176 (398)
T 4b99_A 99 RTLRELKILKHFKHDNIIAIKD-ILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQ-PLTLEHVRYFLYQLLRGLKYMHS 176 (398)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-ECCCSSCTTTCCCEEEEEECCSEEHHHHHTSSS-CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCcceEee-eeecccccccCCEEEEEEeCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHH
Confidence 4447999999999999999999 44332 2234789999997789999996544 59999999999999999999999
Q ss_pred cCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004998 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+|||||||||+|||++.+|.+||+|||+++.+......
T Consensus 177 ~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~~~~~~------------------------------------------ 214 (398)
T 4b99_A 177 AQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAE------------------------------------------ 214 (398)
T ss_dssp TTCBCCCCCGGGEEECTTCCEEECCCTTCBCC------------------------------------------------
T ss_pred CcCcCCCcCccccccCCCCCEEEeecceeeecccCccc------------------------------------------
Confidence 99999999999999999999999999988543221000
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC-CCccccchhhh
Q 004998 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLG 298 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLG 298 (720)
........+||++|||||++.+.. |+.++||||||
T Consensus 215 --------------------------------------------~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG 250 (398)
T 4b99_A 215 --------------------------------------------HQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVG 250 (398)
T ss_dssp ---------------------------------------------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHH
T ss_pred --------------------------------------------cccccccceeChHhcCHHHhcCCCCCCChhheehhH
Confidence 000011258999999999998865 79999999999
Q ss_pred hhhhhccc---cCCCCchHHHHHHHhhc-CCCCcc----------------------------ccccCchHHHHHHHcCC
Q 004998 299 VLLFELFC---PFSTGEEKTRTMSSLRH-RVLPPQ----------------------------LLLKFPKEASFCLWLLH 346 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~-~~~p~~----------------------------~~~~~p~~~~li~~~L~ 346 (720)
|++|||++ ||.+.+........+.. +.++.. +....+...+||.+||.
T Consensus 251 ~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~ 330 (398)
T 4b99_A 251 CIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLR 330 (398)
T ss_dssp HHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSC
T ss_pred HHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCc
Confidence 99999999 77766554333222221 111110 01123445599999999
Q ss_pred CCCCCCCChHHHHcCcccCCCccch
Q 004998 347 PEPSGRPKMGELLQSEFLNEPRDSM 371 (720)
Q Consensus 347 ~dP~~Rpta~eiL~hp~~~~~~~~l 371 (720)
+||.+|||+.|+|+||||++..++.
T Consensus 331 ~dP~~R~ta~e~L~Hp~f~~~~~p~ 355 (398)
T 4b99_A 331 FEPSARISAAAALRHPFLAKYHDPD 355 (398)
T ss_dssp SSTTTSCCHHHHTTSGGGTTTCCGG
T ss_pred CChhHCcCHHHHhcCHhhCcCCCCc
Confidence 9999999999999999999875543
No 11
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=1.4e-41 Score=360.48 Aligned_cols=205 Identities=16% Similarity=0.233 Sum_probs=162.4
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|+.+|++++|||||++++ ++..+ .+|+|||| .||+|.++|......+++.++..|+.||+.||.|||++|
T Consensus 78 ~f~~E~~il~~l~HpNIV~l~g-~~~~~----~~~iVmEy~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ 152 (307)
T 3omv_A 78 AFRNEVAVLRKTRHVNILLFMG-YMTKD----NLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKN 152 (307)
T ss_dssp HHHHHHHHHTTCCCTTBCCEEE-EECSS----SCEEEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCEeeEEE-EEECC----eEEEEEEcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3447889999999999999999 55433 46999999 999999999766667999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
||||||||+||||+.++.+||+|||+|+........
T Consensus 153 IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~-------------------------------------------- 188 (307)
T 3omv_A 153 IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGS-------------------------------------------- 188 (307)
T ss_dssp CBCSCCCSSSEEEETTEEEEECCCSSCBC---------------------------------------------------
T ss_pred ccCCccCHHHEEECCCCcEEEeeccCceecccCCcc--------------------------------------------
Confidence 999999999999999999999988887432111000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC---CCCccccchhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA---PVSCASDIYRLG 298 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~---~~s~~sDIwSLG 298 (720)
......+||+.|||||++.+. +|+.++||||||
T Consensus 189 --------------------------------------------~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~G 224 (307)
T 3omv_A 189 --------------------------------------------QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYG 224 (307)
T ss_dssp -------------------------------------------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHH
T ss_pred --------------------------------------------eeecccccCCCccCHHHhhccCCCCCCcHHHhHhHH
Confidence 000124799999999999643 489999999999
Q ss_pred hhhhhccc---cCCCCchHHHHHHHhhcCCCCcc---ccccCchH-HHHHHHcCCCCCCCCCChHHHHc
Q 004998 299 VLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQ---LLLKFPKE-ASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~---~~~~~p~~-~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|+||||+| ||............+..+..+|. ....+|.. .+|+.+||+.||++|||+.||++
T Consensus 225 vvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~ 293 (307)
T 3omv_A 225 IVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILS 293 (307)
T ss_dssp HHHHHHHHSSCTTTTCCCHHHHHHHHHTTCCCCCSTTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHH
T ss_pred HHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCCcccccccchHHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence 99999999 88766655555555555544433 33344444 59999999999999999998764
No 12
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=8.1e-41 Score=363.66 Aligned_cols=235 Identities=18% Similarity=0.237 Sum_probs=162.6
Q ss_pred eeeehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004998 63 RKHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+..+|..+|..+ +|||||++++ ++++.. ++|+|||| .|++|.++++ .+++.+++.|++||+.||+|||++
T Consensus 65 ~~~~E~~~l~~~~~h~nIv~l~~-~~~~~~---~~~lvmE~~~g~~L~~~~~----~l~~~~~~~~~~qll~al~ylH~~ 136 (361)
T 4f9c_A 65 RIAAELQCLTVAGGQDNVMGVKY-CFRKND---HVVIAMPYLEHESFLDILN----SLSFQEVREYMLNLFKALKRIHQF 136 (361)
T ss_dssp HHHHHHHHHHHTCSBTTBCCCSE-EEEETT---EEEEEEECCCCCCHHHHHT----TCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhcCCCCCceEEE-EEEECC---EEEEEEeCCCcccHHHHHc----CCCHHHHHHHHHHHHHHHHHHHHC
Confidence 445788888887 6999999999 665554 68999999 8999999993 399999999999999999999999
Q ss_pred CceeccCCCCcEEEccC-CceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004998 141 GIVVHNVRPSCFVMSSF-NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~-~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
|||||||||+|||++.+ +.+||+|||+|+........ ..+|+........
T Consensus 137 gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~~~-----------------------------~~~~~~~~~~~~~ 187 (361)
T 4f9c_A 137 GIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIE-----------------------------LLKFVQSEAQQER 187 (361)
T ss_dssp TEECSCCSGGGEEEETTTTEEEECCCTTCEECTTCSCG-----------------------------GGGGC--------
T ss_pred CeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCcccc-----------------------------ccccccccccccc
Confidence 99999999999999876 89999999999654332111 1222111110000
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC-CCccccchhhh
Q 004998 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLG 298 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLG 298 (720)
.....+. .. ..........+||++|+|||++.+.. |+.++||||+|
T Consensus 188 ~~~~~~~-----------------------~~----------~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG 234 (361)
T 4f9c_A 188 CSQNKCS-----------------------IC----------LSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAG 234 (361)
T ss_dssp ---------------------------------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHH
T ss_pred ccccccc-----------------------cc----------ccccccccccccCccccCHHHHcCCCCCCCccchhhhH
Confidence 0000000 00 00000112368999999999998875 89999999999
Q ss_pred hhhhhccc---cCCCCchHHHHHHHhhc---------------------CCCC------------------c--------
Q 004998 299 VLLFELFC---PFSTGEEKTRTMSSLRH---------------------RVLP------------------P-------- 328 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~---------------------~~~p------------------~-------- 328 (720)
|++|||++ ||.+.......+..+.. ...| |
T Consensus 235 ~il~ell~G~~Pf~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~ 314 (361)
T 4f9c_A 235 VIFLSLLSGRYPFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQG 314 (361)
T ss_dssp HHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC---------------
T ss_pred HHHHHHHHCCCCCCCCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhcccccccccccccccc
Confidence 99999999 77654433222221110 0000 0
Q ss_pred -----cccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 329 -----QLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 329 -----~~~~~~-p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
...... +...|||.+||++||++|||++|+|+||||++.
T Consensus 315 ~~~~~~~~~~is~~a~DLl~~lL~~dP~~R~ta~eaL~Hp~f~~i 359 (361)
T 4f9c_A 315 HATNLEGWNEVPDEAYDLLDKLLDLNPASRITAEEALLHPFFKDM 359 (361)
T ss_dssp -------CTTCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGTTC
T ss_pred ccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCCC
Confidence 011122 344599999999999999999999999999875
No 13
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=1.7e-40 Score=381.58 Aligned_cols=203 Identities=18% Similarity=0.190 Sum_probs=162.1
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.+..+++.++|||||++++ ++++.. .+|+|||| .||+|.++|.+.+ .+++..++.|+.||+.||+|||++||||
T Consensus 241 ~~l~ll~~~~HP~IV~l~~-~f~~~~---~lylVmEy~~GGdL~~~l~~~~-~l~E~~a~~y~~qIl~aL~yLH~~gIiH 315 (689)
T 3v5w_A 241 IMLSLVSTGDCPFIVCMSY-AFHTPD---KLSFILDLMNGGDLHYHLSQHG-VFSEADMRFYAAEIILGLEHMHNRFVVY 315 (689)
T ss_dssp HHHHHHSSSCCTTBCCEEE-EEECSS---EEEEEECCCCSCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHTTTEEC
T ss_pred HHHHHHhhCCCCCEeEEEE-EEEECC---EEEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 4455778899999999999 666654 68999999 9999999996544 4999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+||||+.+|++||+|||+|+.....
T Consensus 316 RDLKPeNILld~~G~vKL~DFGlA~~~~~~-------------------------------------------------- 345 (689)
T 3v5w_A 316 RDLKPANILLDEHGHVRISDLGLACDFSKK-------------------------------------------------- 345 (689)
T ss_dssp CCCSGGGEEECTTSCEEECCCTTCEECSSC--------------------------------------------------
T ss_pred cCCchHHeEEeCCCCEEecccceeeecCCC--------------------------------------------------
Confidence 999999999999999999988887432111
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-CCCCccccchhhhhhhhh
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLFE 303 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sDIwSLGvll~e 303 (720)
.....+||+.|||||++.+ ..|+.++|||||||+|||
T Consensus 346 ------------------------------------------~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYE 383 (689)
T 3v5w_A 346 ------------------------------------------KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFK 383 (689)
T ss_dssp ------------------------------------------CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHH
T ss_pred ------------------------------------------CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHH
Confidence 0011589999999999975 569999999999999999
Q ss_pred ccc---cCCCCc--hHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCC-----hHHHHcCcccCCC
Q 004998 304 LFC---PFSTGE--EKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~--~~~~~~~~l~~~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rpt-----a~eiL~hp~~~~~ 367 (720)
|++ ||.... ........+.... ..++..+ +...+||.+||++||.+|++ ++||++||||+..
T Consensus 384 mLtG~~PF~~~~~~~~~~i~~~i~~~~--~~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~HpfF~~i 456 (689)
T 3v5w_A 384 LLRGHSPFRQHKTKDKHEIDRMTLTMA--VELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSL 456 (689)
T ss_dssp HHHSSCTTCGGGCCCHHHHHHHHHHCC--CCCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTSGGGTTC
T ss_pred HHhCCCCCCCCChHHHHHHHHhhcCCC--CCCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcCccccCC
Confidence 999 665432 2223333333222 1222333 44569999999999999997 7999999999986
No 14
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=3.6e-40 Score=350.56 Aligned_cols=204 Identities=17% Similarity=0.209 Sum_probs=163.3
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC---------------CCCCCHHHHHHHH
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---------------KRSVDVYECLHIF 127 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~---------------~~~l~~~~~~~i~ 127 (720)
..+|+.+|++++|||||++++ ++.++. .+|+|||| .+|+|.++|... ...+++.+++.|+
T Consensus 76 f~~E~~il~~l~HpNIV~l~g-~~~~~~---~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~ 151 (308)
T 4gt4_A 76 FRHEAMLRARLQHPNVVCLLG-VVTKDQ---PLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLV 151 (308)
T ss_dssp HHHHHHHHHHCCCTTBCCEEE-EECSSS---SCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCCCcce-EEEECC---EEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHH
Confidence 347888999999999999999 555443 57999999 999999999432 1358999999999
Q ss_pred HHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccc
Q 004998 128 RQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRR 207 (720)
Q Consensus 128 ~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l 207 (720)
.||+.||.|||+++||||||||+||||+.++.+||+|||+++.....
T Consensus 152 ~qia~gl~yLH~~~iiHRDLK~~NILl~~~~~~Ki~DFGlar~~~~~--------------------------------- 198 (308)
T 4gt4_A 152 AQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAA--------------------------------- 198 (308)
T ss_dssp HHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCSCCBCGGGGG---------------------------------
T ss_pred HHHHHHHHHHHhCCCCCCCccccceEECCCCCEEECCcccceeccCC---------------------------------
Confidence 99999999999999999999999999999999999988887432100
Q ss_pred cccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC
Q 004998 208 EDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP 287 (720)
Q Consensus 208 ~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~ 287 (720)
+. .......+||+.|||||++.+..
T Consensus 199 -~~------------------------------------------------------~~~~~~~~gt~~ymAPE~l~~~~ 223 (308)
T 4gt4_A 199 -DY------------------------------------------------------YKLLGNSLLPIRWMAPEAIMYGK 223 (308)
T ss_dssp -GC------------------------------------------------------BCSSSSSCBCGGGCCHHHHHHCC
T ss_pred -Cc------------------------------------------------------eeEecccccCCcccCHHHHhCCC
Confidence 00 00001147899999999999999
Q ss_pred CCccccchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCch-HHHHHHHcCCCCCCCCCChHHHHcC
Q 004998 288 VSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 288 ~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~-~~~li~~~L~~dP~~Rpta~eiL~h 361 (720)
|+.++|||||||+||||+| ||...... .....+..+..++.. ..+|. ..+|+.+||+.||++|||+.||+++
T Consensus 224 ~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~-~~~~~i~~~~~~~~p-~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~ 300 (308)
T 4gt4_A 224 FSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ-DVVEMIRNRQVLPCP-DDCPAWVYALMIECWNEFPSRRPRFKDIHSR 300 (308)
T ss_dssp CCHHHHHHHHHHHHHHHHTTTCCTTTTCCHH-HHHHHHHTTCCCCCC-TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCccchhhhHHHHHHHHHhCCCCCCCCCCHH-HHHHHHHcCCCCCCc-ccchHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 9999999999999999997 77766544 455556665554443 34444 4599999999999999999999863
No 15
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=7.3e-40 Score=346.73 Aligned_cols=203 Identities=19% Similarity=0.214 Sum_probs=162.7
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC------------CCCCCHHHHHHHHHH
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP------------KRSVDVYECLHIFRQ 129 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~------------~~~l~~~~~~~i~~Q 129 (720)
+..+|+.+|++++|||||++|+ ++.++. .+|+|||| .+|+|.++|.+. ...+++.+++.|+.|
T Consensus 61 ~f~~E~~il~~l~HpnIV~l~g-~~~~~~---~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~q 136 (299)
T 4asz_A 61 DFHREAELLTNLQHEHIVKFYG-VCVEGD---PLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQ 136 (299)
T ss_dssp HHHHHHHHHTTCCCTTBCCEEE-EECSSS---SEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCccEEE-EEeeCC---EEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHH
Confidence 3447888999999999999999 555543 58999999 999999999543 245999999999999
Q ss_pred HHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccc
Q 004998 130 IVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRRED 209 (720)
Q Consensus 130 Il~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~D 209 (720)
|+.||.|||+++||||||||+||||+.++.+||+|||+++..... +
T Consensus 137 ia~gl~yLH~~~iiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~----------------------------------~ 182 (299)
T 4asz_A 137 IAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYST----------------------------------D 182 (299)
T ss_dssp HHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGG----------------------------------G
T ss_pred HHHHHHHHHhCCcccCccCHhhEEECCCCcEEECCcccceecCCC----------------------------------C
Confidence 999999999999999999999999999999999988887432100 0
Q ss_pred cccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCC
Q 004998 210 LQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVS 289 (720)
Q Consensus 210 fgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s 289 (720)
. . .......||+.|||||++.+..|+
T Consensus 183 ~----------------------------------~--------------------~~~~~~~gt~~ymAPE~~~~~~~~ 208 (299)
T 4asz_A 183 Y----------------------------------Y--------------------RVGGHTMLPIRWMPPESIMYRKFT 208 (299)
T ss_dssp C----------------------------------E--------------------EETTTEEECGGGCCHHHHHHCCCC
T ss_pred c----------------------------------e--------------------eecCceecChhhcCHHHHcCCCCC
Confidence 0 0 000114689999999999999999
Q ss_pred ccccchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHH
Q 004998 290 CASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELL 359 (720)
Q Consensus 290 ~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL 359 (720)
.++|||||||+||||+| ||...... ..+..+..+..++.. ..+| ...+|+.+||+.||++|||+.||+
T Consensus 209 ~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~-~~~~~i~~~~~~~~p-~~~~~~~~~li~~cl~~dP~~RPs~~~i~ 281 (299)
T 4asz_A 209 TESDVWSLGVVLWEIFTYGKQPWYQLSNN-EVIECITQGRVLQRP-RTCPQEVYELMLGCWQREPHMRKNIKGIH 281 (299)
T ss_dssp HHHHHHHHHHHHHHHHTTTCCTTTTSCHH-HHHHHHHHTCCCCCC-TTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred chhhHHHHHHHHHHHHcCCCCCCCCCCHH-HHHHHHHcCCCCCCC-ccchHHHHHHHHHHcCCChhHCcCHHHHH
Confidence 99999999999999997 77765544 455555555444433 3344 445999999999999999999995
No 16
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=2.8e-39 Score=346.88 Aligned_cols=205 Identities=15% Similarity=0.139 Sum_probs=159.4
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC--------------CCCCHHHHHHHH
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK--------------RSVDVYECLHIF 127 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~--------------~~l~~~~~~~i~ 127 (720)
+..+|+.+|++++|||||++++ ++.+.. .+|+|||| .+|+|.++|.+.. .++++.+++.|+
T Consensus 89 ~f~~E~~il~~l~HpnIV~l~g-~~~~~~---~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~ 164 (329)
T 4aoj_A 89 DFQREAELLTMLQHQHIVRFFG-VCTEGR---PLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVA 164 (329)
T ss_dssp HHHHHHHHHTTCCCTTBCCEEE-EECSSS---SEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCCcEEE-EEEECC---EEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHH
Confidence 3447888999999999999999 555443 58999999 9999999995432 358999999999
Q ss_pred HHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccc
Q 004998 128 RQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRR 207 (720)
Q Consensus 128 ~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l 207 (720)
.||+.||.|||+++||||||||+||||+.++.+||+|||+++......
T Consensus 165 ~qia~gl~yLH~~~iiHRDLKp~NILl~~~~~~Ki~DFGla~~~~~~~-------------------------------- 212 (329)
T 4aoj_A 165 SQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTD-------------------------------- 212 (329)
T ss_dssp HHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEECCCC-----------------------------------------
T ss_pred HHHHHHHHHHhcCCeecccccHhhEEECCCCcEEEcccccceeccCCC--------------------------------
Confidence 999999999999999999999999999999999999888875321110
Q ss_pred cccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC
Q 004998 208 EDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP 287 (720)
Q Consensus 208 ~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~ 287 (720)
. .......+||+.|||||++.+..
T Consensus 213 --~------------------------------------------------------~~~~~~~~gt~~ymAPE~~~~~~ 236 (329)
T 4aoj_A 213 --Y------------------------------------------------------YRVGGRTMLPIRWMPPESILYRK 236 (329)
T ss_dssp ---------------------------------------------------------------CCCCGGGCCHHHHTTCC
T ss_pred --c------------------------------------------------------ceecCcccccccccChhhhcCCC
Confidence 0 00001147899999999999999
Q ss_pred CCccccchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 288 VSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 288 ~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|+.++|||||||+||||+| ||...... ..+..+..+..++......+...+|+.+||+.||++|||+.||++
T Consensus 237 ~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~-~~~~~i~~g~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~ 312 (329)
T 4aoj_A 237 FTTESDVWSFGVVLWEIFTYGKQPWYQLSNT-EAIDCITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHA 312 (329)
T ss_dssp CCHHHHHHHHHHHHHHHHTTSCCTTCSSCHH-HHHHHHHHTCCCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHH
T ss_pred CCccccccchHHHHHHHHcCCCCCCCCCCHH-HHHHHHHcCCCCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHH
Confidence 9999999999999999997 77665544 444555554433332233344559999999999999999999986
No 17
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=4.9e-39 Score=369.99 Aligned_cols=208 Identities=17% Similarity=0.264 Sum_probs=170.6
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
+|+.+|+.++|||||++++ ++++.. .+|+|||| .||+|.++|......+++.+++.|++||+.||.|||++||+|
T Consensus 203 ~Ei~il~~l~hpnIv~l~~-~~~~~~---~~~iv~E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiH 278 (573)
T 3uto_A 203 KEIQTMSVLRHPTLVNLHD-AFEDDN---EMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVH 278 (573)
T ss_dssp HHHHHHHHTCCTTBCCEEE-EEECSS---EEEEEEECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhCCCCCCCeEEE-EEEECC---EEEEEEeecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCeee
Confidence 6888999999999999999 665554 68999999 899999999655556999999999999999999999999999
Q ss_pred ccCCCCcEEEccC--CceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 145 HNVRPSCFVMSSF--NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 145 rDLKP~NILl~~~--~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
|||||+|||++.+ +.+||+|||+++......
T Consensus 279 RDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~----------------------------------------------- 311 (573)
T 3uto_A 279 LDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ----------------------------------------------- 311 (573)
T ss_dssp CCCCGGGEEESSSSCCCEEECCCSSCEECCTTS-----------------------------------------------
T ss_pred ccCChhhccccCCCCCCEEEeeccceeEccCCC-----------------------------------------------
Confidence 9999999999854 899999888874321110
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
.....+||++|||||++.+..|+.++|||||||+||
T Consensus 312 --------------------------------------------~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvily 347 (573)
T 3uto_A 312 --------------------------------------------SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSY 347 (573)
T ss_dssp --------------------------------------------EEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHH
T ss_pred --------------------------------------------ceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHH
Confidence 001247999999999999999999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcC--CCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004998 303 ELFC---PFSTGEEKTRTMSSLRHR--VLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~--~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
||++ ||...... ..+..+... .+++.....++ ...+||.+||++||.+|||+.|+|+||||+....
T Consensus 348 eml~G~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~Hpw~~~~~~ 419 (573)
T 3uto_A 348 ILLSGLSPFGGENDD-ETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNA 419 (573)
T ss_dssp HHHHSCCSSCCSSHH-HHHHHHHTTCCCCCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTSCCCC
T ss_pred HHHHCCCCCCCcCHH-HHHHHHHhCCCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcCcCcCCCCC
Confidence 9999 77766554 444444443 23344444444 4459999999999999999999999999997644
No 18
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=3.2e-39 Score=343.05 Aligned_cols=212 Identities=12% Similarity=0.105 Sum_probs=155.8
Q ss_pred ceeeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004998 61 ELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 61 ~~r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
.+..++|...+.+++|||||++++++..+......+|+|||| .||+|.++|++. ++++..+..|+.||+.||.|||+
T Consensus 41 ~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~--~l~~~~~~~i~~~ia~gl~ylH~ 118 (303)
T 3hmm_A 41 SWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHM 118 (303)
T ss_dssp HHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecCCCCCcHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHH
Confidence 344567888888999999999999554444444468999999 899999999654 38999999999999999999998
Q ss_pred c--------CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccc
Q 004998 140 Q--------GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQ 211 (720)
Q Consensus 140 ~--------gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfg 211 (720)
+ |||||||||+||||+.++++||+|||+++...... +.
T Consensus 119 ~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~---------------------------------~~- 164 (303)
T 3hmm_A 119 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSAT---------------------------------DT- 164 (303)
T ss_dssp CBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEETTT---------------------------------TE-
T ss_pred hhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccccCCC---------------------------------Cc-
Confidence 7 99999999999999999999999888874321110 00
Q ss_pred cccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-----
Q 004998 212 LVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA----- 286 (720)
Q Consensus 212 la~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~----- 286 (720)
........+||++|||||++.+.
T Consensus 165 ----------------------------------------------------~~~~~~~~~GT~~ymAPE~l~~~~~~~~ 192 (303)
T 3hmm_A 165 ----------------------------------------------------IDIAPNHRVGTKRYMAPEVLDDSINMKH 192 (303)
T ss_dssp ----------------------------------------------------ESCC-----CCGGGCCHHHHTTCSCTTC
T ss_pred ----------------------------------------------------eeeecccccccccccCHHHhcccccccC
Confidence 00001125799999999999765
Q ss_pred -CCCccccchhhhhhhhhccc---cCC----------CC----chHHHHHHHhhcCCCCccccccC------chHHHHHH
Q 004998 287 -PVSCASDIYRLGVLLFELFC---PFS----------TG----EEKTRTMSSLRHRVLPPQLLLKF------PKEASFCL 342 (720)
Q Consensus 287 -~~s~~sDIwSLGvll~eLlt---pf~----------~~----~~~~~~~~~l~~~~~p~~~~~~~------p~~~~li~ 342 (720)
.|+.++|||||||+||||+| ||. .. .........+....+.|.++..+ ....+|+.
T Consensus 193 ~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~ 272 (303)
T 3hmm_A 193 FESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMR 272 (303)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHH
T ss_pred CccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHHHHHHHHhcccCCCCCCccccchHHHHHHHHHHH
Confidence 36789999999999999998 221 10 11223333343444434333222 12358999
Q ss_pred HcCCCCCCCCCChHHHHc
Q 004998 343 WLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 343 ~~L~~dP~~Rpta~eiL~ 360 (720)
+||+.||++|||+.||++
T Consensus 273 ~cl~~dP~~RPt~~ei~~ 290 (303)
T 3hmm_A 273 ECWYANGAARLTALRIKK 290 (303)
T ss_dssp TTCCSSGGGSCCHHHHHH
T ss_pred HHcccCHhHCcCHHHHHH
Confidence 999999999999999985
No 19
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=7.7e-39 Score=346.34 Aligned_cols=207 Identities=20% Similarity=0.206 Sum_probs=164.5
Q ss_pred eeehhhhcccCCC-CCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC---------------CCCCCHHHHHHH
Q 004998 64 KHSDGVELTHGDH-LRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---------------KRSVDVYECLHI 126 (720)
Q Consensus 64 ~~~e~~~Ls~l~H-pnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~---------------~~~l~~~~~~~i 126 (720)
..+|..+|.+++| ||||++++++.+++. .+|+|||| .+|+|.++|++. ...+++.+++.|
T Consensus 114 ~~~E~~il~~l~hhpnIV~l~g~~~~~~~---~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 190 (353)
T 4ase_A 114 LMSELKILIHIGHHLNVVNLLGACTKPGG---PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 190 (353)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEEEECCTTS---CCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHH
T ss_pred HHHHHHHHHHcCCCCcEEEEEEEEEecCC---EEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHH
Confidence 3478889999876 899999994334332 47999999 999999999532 234899999999
Q ss_pred HHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccc
Q 004998 127 FRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLR 206 (720)
Q Consensus 127 ~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 206 (720)
+.||+.||.|||+++||||||||+|||++.++.+||+|||+++......
T Consensus 191 ~~qia~gl~yLH~~~iiHRDLK~~NILl~~~~~vKi~DFGlar~~~~~~------------------------------- 239 (353)
T 4ase_A 191 SFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP------------------------------- 239 (353)
T ss_dssp HHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCT-------------------------------
T ss_pred HHHHHHHHHhHhhCCeecCccCccceeeCCCCCEEECcchhhhhcccCC-------------------------------
Confidence 9999999999999999999999999999999999998888885432110
Q ss_pred ccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC
Q 004998 207 REDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA 286 (720)
Q Consensus 207 l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 286 (720)
+. .......||+.|||||++.+.
T Consensus 240 --~~-------------------------------------------------------~~~~~~~gt~~ymAPE~l~~~ 262 (353)
T 4ase_A 240 --DY-------------------------------------------------------VRKGDARLPLKWMAPETIFDR 262 (353)
T ss_dssp --TS-------------------------------------------------------EEETTEEECGGGCCHHHHHHC
T ss_pred --Cc-------------------------------------------------------eeeccccccccccCHHHHhcC
Confidence 00 001124789999999999999
Q ss_pred CCCccccchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004998 287 PVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 287 ~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~h 361 (720)
.|+.++|||||||+||||+| ||............+..+..++......+...+||.+||+.||++|||+.||++|
T Consensus 263 ~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~~~~~i~~g~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~ 341 (353)
T 4ase_A 263 VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 341 (353)
T ss_dssp CCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCCCcccEeehHHHHHHHHhCCCCCCCCCCHHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence 99999999999999999997 7876654445556666555444333344555699999999999999999999975
No 20
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=9.9e-37 Score=325.62 Aligned_cols=226 Identities=24% Similarity=0.381 Sum_probs=177.6
Q ss_pred eeeehhhhcccCCCCCceecccceeecCC---------------------------------------------------
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEA--------------------------------------------------- 91 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~--------------------------------------------------- 91 (720)
+..+|..+|++++|||||++++.+.+...
T Consensus 50 ~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (332)
T 3qd2_B 50 KVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQP 129 (332)
T ss_dssp HHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHHHC------------------------------------------
T ss_pred HHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccC
Confidence 34478889999999999999995443321
Q ss_pred --CCCcEEEEEec-CCCCHHHHHhCCCC--CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccC
Q 004998 92 --AIDPFVHAIEW-GDVSLRQWLDKPKR--SVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESA 166 (720)
Q Consensus 92 --~~~~~~lv~E~-~ggsL~~~L~~~~~--~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg 166 (720)
....++++||| .|++|.+++..... ..++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||
T Consensus 130 ~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG 209 (332)
T 3qd2_B 130 SSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFG 209 (332)
T ss_dssp --CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCT
T ss_pred CCCCceEEEEEEecCCCCHHHHHhcccCccchhhHHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCCCCEEEeecC
Confidence 11247999999 89999999955332 35667799999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccCCCcccccccccccccccc
Q 004998 167 SCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHK 246 (720)
Q Consensus 167 ~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~ 246 (720)
++...+....... .+.
T Consensus 210 ~a~~~~~~~~~~~-----------------------------~~~----------------------------------- 225 (332)
T 3qd2_B 210 LVTAMDQDEEEQT-----------------------------VLT----------------------------------- 225 (332)
T ss_dssp TCEECSCC------------------------------------------------------------------------
T ss_pred cccccccchhhcc-----------------------------ccc-----------------------------------
Confidence 8855432210000 000
Q ss_pred ccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhccccCCCCchHHHHHHHhhcCCC
Q 004998 247 ILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFCPFSTGEEKTRTMSSLRHRVL 326 (720)
Q Consensus 247 ~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLltpf~~~~~~~~~~~~l~~~~~ 326 (720)
............||+.|+|||++.+..++.++|||||||++|||++|+.+..........+....+
T Consensus 226 --------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~~~~~~~~~~~~ 291 (332)
T 3qd2_B 226 --------------PMPAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVRIITDVRNLKF 291 (332)
T ss_dssp --------------------CCCSCC-CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHTTCC
T ss_pred --------------cccccccccccCCCcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHHHHHHHhhccCC
Confidence 000000011257899999999999999999999999999999999999887776677777777777
Q ss_pred CccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCC
Q 004998 327 PPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 366 (720)
Q Consensus 327 p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~ 366 (720)
|.......+...+||.+||++||.+|||+.|+|+||||++
T Consensus 292 ~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~f~~ 331 (332)
T 3qd2_B 292 PLLFTQKYPQEHMMVQDMLSPSPTERPEATDIIENAIFEN 331 (332)
T ss_dssp CHHHHHHCHHHHHHHHHHHCSSGGGSCCHHHHHHSTTCCC
T ss_pred CcccccCChhHHHHHHHHccCCCCcCCCHHHHhhchhhhc
Confidence 7777777788889999999999999999999999999986
No 21
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=5.1e-36 Score=317.15 Aligned_cols=209 Identities=15% Similarity=0.190 Sum_probs=168.4
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..++.+++||||+++++ ++..+. .+|+|||| .|++|.+++... .+++.+++.++.||+.||.|||++||+
T Consensus 65 ~~E~~~l~~l~hp~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~ 138 (297)
T 3fxz_A 65 INEILVMRENKNPNIVNYLD-SYLVGD---ELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSNQVI 138 (297)
T ss_dssp HHHHHHHHHCCCTTBCCEEE-EEEETT---EEEEEEECCTTCBHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHhcCCCCCCCeEeE-EEEECC---EEEEEEECCCCCCHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCce
Confidence 46778999999999999999 554443 57999999 899999999654 389999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.+||+|||++........
T Consensus 139 H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~----------------------------------------------- 171 (297)
T 3fxz_A 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS----------------------------------------------- 171 (297)
T ss_dssp CCCCSGGGEEECTTCCEEECCCTTCEECCSTTC-----------------------------------------------
T ss_pred eCCCCHHHEEECCCCCEEEeeCCCceecCCccc-----------------------------------------------
Confidence 999999999999999999999988743211100
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......||+.|+|||++.+..++.++|||||||++||
T Consensus 172 -------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e 208 (297)
T 3fxz_A 172 -------------------------------------------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIE 208 (297)
T ss_dssp -------------------------------------------CBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHH
T ss_pred -------------------------------------------ccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHH
Confidence 0011478999999999999999999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCCCCccccccCch-HHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004998 304 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~-~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
|++ ||..........................+. ..+|+.+||++||.+|||+.|+|+||||+....
T Consensus 209 ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~ 278 (297)
T 3fxz_A 209 MIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQFLKIAKP 278 (297)
T ss_dssp HHHSSCTTTTSCHHHHHHHHHHHCSCCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCCC
T ss_pred HHhCCCCCCCCCHHHHHHHHHhCCCCCCCCccccCHHHHHHHHHHccCChhHCcCHHHHhhChhhcccCc
Confidence 999 776665554444433333333333334444 459999999999999999999999999997643
No 22
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=2.4e-36 Score=324.63 Aligned_cols=208 Identities=17% Similarity=0.215 Sum_probs=166.1
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|..++||||+++++ ++.... .+|+|||| .|++|.+++...+ .+++.+++.++.||+.||.|||++|
T Consensus 60 ~~~~E~~~l~~l~hpnIv~l~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~al~~lH~~~ 134 (328)
T 3fe3_A 60 KLFREVRIMKILNHPNIVKLFE-VIETEK---TLYLIMEYASGGEVFDYLVAHG-RMKEKEARSKFRQIVSAVQYCHQKR 134 (328)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EEECSS---EEEEEECCCTTCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCEeeEEE-EEEECC---EEEEEEECCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 4447888999999999999999 555543 57999999 7999999995543 4999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||++.......
T Consensus 135 ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~---------------------------------------------- 168 (328)
T 3fe3_A 135 IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG---------------------------------------------- 168 (328)
T ss_dssp CCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSC----------------------------------------------
T ss_pred EeccCCCHHHEEEcCCCCEEEeeccCceecCCCC----------------------------------------------
Confidence 9999999999999999999999998873221000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCC-Cccccchhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYRLGVL 300 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~-s~~sDIwSLGvl 300 (720)
.....+||++|+|||++.+..+ ++++|||||||+
T Consensus 169 ---------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~i 203 (328)
T 3fe3_A 169 ---------------------------------------------KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVI 203 (328)
T ss_dssp ---------------------------------------------GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHH
T ss_pred ---------------------------------------------ccccccCCcceeCcccccCCCcCCchhhhhhhHHH
Confidence 0011478999999999998886 489999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004998 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
+|||++ ||...... .....+..+..+.. ....+...+|+.+||.+||.+|||+.|+|+||||+...
T Consensus 204 l~ell~g~~pf~~~~~~-~~~~~i~~~~~~~p-~~~s~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~~~ 272 (328)
T 3fe3_A 204 LYTLVSGSLPFDGQNLK-ELRERVLRGKYRIP-FYMSTDCENLLKRFLVLNPIKRGTLEQIMKDRWINAGH 272 (328)
T ss_dssp HHHHHHSSCSSCCSSHH-HHHHHHHHCCCCCC-TTSCHHHHHHHHHHCCSSTTTSCCHHHHTTCTTTTTTC
T ss_pred HHHHHhCCCCCCCCCHH-HHHHHHHhCCCCCC-CCCCHHHHHHHHHHCCCChhHCcCHHHHhcCHhhcCCC
Confidence 999999 77765544 33333333322211 12334556999999999999999999999999998753
No 23
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=7.5e-36 Score=325.01 Aligned_cols=207 Identities=18% Similarity=0.262 Sum_probs=167.3
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..+|.+++||||+++++ ++++.. .+|+|||| .|++|.+++... ..+++.+++.++.||+.||.|||++||
T Consensus 62 ~~~E~~il~~l~hpnIv~l~~-~~~~~~---~~~lv~e~~~gg~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~gi 136 (361)
T 2yab_A 62 IEREVSILRQVLHPNIITLHD-VYENRT---DVVLILELVSGGELFDFLAQK-ESLSEEEATSFIKQILDGVNYLHTKKI 136 (361)
T ss_dssp HHHHHHHHTTCCCTTBCCEEE-EEECSS---EEEEEEECCCSCBHHHHHTTC-SCCBHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHhCCCcCCCcEEE-EEEeCC---EEEEEEEcCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 347888999999999999999 665543 68999999 799999999554 459999999999999999999999999
Q ss_pred eeccCCCCcEEEccCC----ceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCC
Q 004998 143 VVHNVRPSCFVMSSFN----HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 143 vHrDLKP~NILl~~~~----~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
+||||||+|||++.++ .+||+|||++.......
T Consensus 137 vHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~~~~~------------------------------------------- 173 (361)
T 2yab_A 137 AHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV------------------------------------------- 173 (361)
T ss_dssp ECCCCSGGGEEESCTTSSSCCEEECCCSSCEECCTTC-------------------------------------------
T ss_pred ccCCCCHHHEEEeCCCCCccCEEEEecCCceEcCCCC-------------------------------------------
Confidence 9999999999998776 79998888874321100
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhh
Q 004998 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
.....+||+.|+|||++.+..++.++||||||
T Consensus 174 ------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG 205 (361)
T 2yab_A 174 ------------------------------------------------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIG 205 (361)
T ss_dssp ------------------------------------------------CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHH
T ss_pred ------------------------------------------------ccccCCCCccEECchHHcCCCCCccccHHHHH
Confidence 00114689999999999998899999999999
Q ss_pred hhhhhccc---cCCCCchHHHHHHHhhcCC--CCccccccCch-HHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 299 VLLFELFC---PFSTGEEKTRTMSSLRHRV--LPPQLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~--~p~~~~~~~p~-~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|++|+|++ ||...... ..+..+.... +++......+. ..+||.+||.+||.+|||+.|+|+||||+..
T Consensus 206 vil~~ll~g~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~ 279 (361)
T 2yab_A 206 VITYILLSGASPFLGDTKQ-ETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPV 279 (361)
T ss_dssp HHHHHHHHSCCSSCCSSHH-HHHHHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTSCS
T ss_pred HHHHHHHhCCCCCCCCCHH-HHHHHHHhcCCCCCchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhcCcCcCCC
Confidence 99999999 67665443 3444444332 34444444444 4599999999999999999999999999875
No 24
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=3.2e-36 Score=320.70 Aligned_cols=206 Identities=21% Similarity=0.277 Sum_probs=163.5
Q ss_pred eehhhhccc-CCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTH-GDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~-l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..|...+.+ .+||||+++++ ++.++. .+|+||||.+++|.+++...+..+++..++.|+.||+.||.|||++||+
T Consensus 104 ~~e~~~~~~~~~h~~iv~l~~-~~~~~~---~~~lv~e~~~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iv 179 (311)
T 3p1a_A 104 LAEVGSHEKVGQHPCCVRLEQ-AWEEGG---ILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLV 179 (311)
T ss_dssp HHHHHHHHHHCCCTTBCCEEE-EEEETT---EEEEEEECCCCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHHhcCCCcEEEEEE-EEEeCC---EEEEEEeccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEe
Confidence 344444444 48999999999 555443 6899999988899999966566699999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.+||+|||++...+...
T Consensus 180 H~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~------------------------------------------------ 211 (311)
T 3p1a_A 180 HLDVKPANIFLGPRGRCKLGDFGLLVELGTAG------------------------------------------------ 211 (311)
T ss_dssp CCCCSGGGEEECGGGCEEECCCTTCEECC---------------------------------------------------
T ss_pred cCCCCHHHEEECCCCCEEEccceeeeecccCC------------------------------------------------
Confidence 99999999999999999999998874321110
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......||+.|+|||++.+ .++.++|||||||++||
T Consensus 212 -------------------------------------------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~e 247 (311)
T 3p1a_A 212 -------------------------------------------AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILE 247 (311)
T ss_dssp ----------------------------------------------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHH
T ss_pred -------------------------------------------CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHH
Confidence 0011368999999999987 58999999999999999
Q ss_pred ccccCCCCchHHHHHHHhhcCCCCccccccCchHH-HHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 304 LFCPFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 304 Lltpf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~-~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|+++....... .....+.....++.+...++... +||.+||++||.+|||+.|+|+||||+++
T Consensus 248 l~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~~~~p 311 (311)
T 3p1a_A 248 VACNMELPHGG-EGWQQLRQGYLPPEFTAGLSSELRSVLVMMLEPDPKLRATAEALLALPVLRQP 311 (311)
T ss_dssp HHHTCCCCSSH-HHHHHHTTTCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGSCC
T ss_pred HHhCCCCCCCc-cHHHHHhccCCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHHhCccccCC
Confidence 99943222221 23445566666766666665554 99999999999999999999999999874
No 25
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=1.3e-35 Score=312.49 Aligned_cols=211 Identities=16% Similarity=0.211 Sum_probs=163.1
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
+..+|..++.+++||||+++++ ++.++. .+|+||||.+++|.+++......+++..++.++.||+.||.|||++||
T Consensus 47 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i 122 (292)
T 3o0g_A 47 SALREICLLKELKHKNIVRLHD-VLHSDK---KLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNV 122 (292)
T ss_dssp HHHHHHHHHTTCCCTTBCCEEE-EEEETT---EEEEEEECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHhcCCCCCEeeEEe-EEEeCC---EEEEEEecCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 3447888999999999999999 555443 689999997778888886655669999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.+||+|||.+...+.+..
T Consensus 123 vH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~---------------------------------------------- 156 (292)
T 3o0g_A 123 LHRDLKPQNLLINRNGELKLANFGLARAFGIPVR---------------------------------------------- 156 (292)
T ss_dssp ECCCCSGGGEEECTTSCEEECCCTTCEECCSCCS----------------------------------------------
T ss_pred ecCCCCHHHEEEcCCCCEEEeecccceecCCccc----------------------------------------------
Confidence 9999999999999999999999998744321100
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC-CCccccchhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLL 301 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGvll 301 (720)
......||+.|+|||++.+.. ++.++|||||||++
T Consensus 157 --------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il 192 (292)
T 3o0g_A 157 --------------------------------------------CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIF 192 (292)
T ss_dssp --------------------------------------------CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHH
T ss_pred --------------------------------------------cccCCccccCCcChHHHcCCCCcCchHHHHHHHHHH
Confidence 001146899999999998876 89999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhc--CCCCcc-------------------------cc-ccCchHHHHHHHcCCCCCC
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRH--RVLPPQ-------------------------LL-LKFPKEASFCLWLLHPEPS 350 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~--~~~p~~-------------------------~~-~~~p~~~~li~~~L~~dP~ 350 (720)
|||++ ||............+.. +..++. .. ...+...+|+.+||++||+
T Consensus 193 ~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~ 272 (292)
T 3o0g_A 193 AELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPV 272 (292)
T ss_dssp HHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGG
T ss_pred HHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccccccccccccCCcchhhcccccChHHHHHHHHHhccChh
Confidence 99997 54443333333333221 000000 01 1223445999999999999
Q ss_pred CCCChHHHHcCcccCCC
Q 004998 351 GRPKMGELLQSEFLNEP 367 (720)
Q Consensus 351 ~Rpta~eiL~hp~~~~~ 367 (720)
+|||++|+|+||||+..
T Consensus 273 ~R~t~~e~l~hp~f~~~ 289 (292)
T 3o0g_A 273 QRISAEEALQHPYFSDF 289 (292)
T ss_dssp GSCCHHHHHTSGGGTTC
T ss_pred hCCCHHHHhcCcccccC
Confidence 99999999999999875
No 26
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=8.7e-36 Score=335.27 Aligned_cols=213 Identities=18% Similarity=0.208 Sum_probs=161.5
Q ss_pred eeeehhhhcccCCCCCceecccceeecCC---CCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEA---AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~---~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
+..+|..+|..++|||||++++ ++.... ....+|+||||.+++|.+.+.. .+++.+++.+++||+.||+|||+
T Consensus 107 ~~~~E~~~l~~l~hpnIv~l~~-~~~~~~~~~~~~~~~lv~E~~~~~l~~~~~~---~l~~~~~~~~~~qil~aL~~lH~ 182 (464)
T 3ttj_A 107 RAYRELVLMKCVNHKNIISLLN-VFTPQKTLEEFQDVYLVMELMDANLCQVIQM---ELDHERMSYLLYQMLCGIKHLHS 182 (464)
T ss_dssp HHHHHHHHHHHCCCTTBCCCSE-EECSCCSTTTCCEEEEEEECCSEEHHHHHTS---CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCCcEEE-EEccCCccccCCeEEEEEeCCCCCHHHHHhh---cCCHHHHHHHHHHHHHHHHHHHH
Confidence 4458888999999999999999 554332 2346899999977788888843 38999999999999999999999
Q ss_pred cCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004998 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||+||||||+|||++.++.+||+|||+++..+...
T Consensus 183 ~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~-------------------------------------------- 218 (464)
T 3ttj_A 183 AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF-------------------------------------------- 218 (464)
T ss_dssp TTCCCCCCCGGGEEECTTSCEEECCCCCC-----CC--------------------------------------------
T ss_pred CCcccCCCChHhEEEeCCCCEEEEEEEeeeecCCCc--------------------------------------------
Confidence 999999999999999999999999998874321110
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhh
Q 004998 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
.....+||++|+|||++.+..|+.++|||||||
T Consensus 219 -----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~ 251 (464)
T 3ttj_A 219 -----------------------------------------------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 251 (464)
T ss_dssp -----------------------------------------------CC----CCCTTCCHHHHTTCCCCTTHHHHHHHH
T ss_pred -----------------------------------------------ccCCCcccccccCHHHHcCCCCCHHHHHHHHHH
Confidence 001257899999999999999999999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhc-CCCCccc-----------------------ccc----------------Cch
Q 004998 300 LLFELFC---PFSTGEEKTRTMSSLRH-RVLPPQL-----------------------LLK----------------FPK 336 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~-~~~p~~~-----------------------~~~----------------~p~ 336 (720)
++|||++ ||.+..........+.. +..++.+ ... .+.
T Consensus 252 il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 331 (464)
T 3ttj_A 252 IMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQ 331 (464)
T ss_dssp HHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHH
T ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHH
Confidence 9999999 77665543322222211 1010000 000 123
Q ss_pred HHHHHHHcCCCCCCCCCChHHHHcCcccCCCccc
Q 004998 337 EASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 337 ~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
..+||.+||++||.+|||++|+|+||||+...++
T Consensus 332 ~~dLl~~mL~~dP~~R~ta~e~L~Hp~~~~~~~~ 365 (464)
T 3ttj_A 332 ARDLLSKMLVIDPAKRISVDDALQHPYINVWYDP 365 (464)
T ss_dssp HHHHHHHHSCSSTTTSCCHHHHHTSTTTGGGCCH
T ss_pred HHHHHHHHcCCChhhCCCHHHHhcChhhhhccCc
Confidence 4599999999999999999999999999976543
No 27
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=9.6e-36 Score=317.14 Aligned_cols=211 Identities=16% Similarity=0.211 Sum_probs=163.6
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..+|..+|.+++||||+++++ ++.++. .+++||||.+++|.+++......+++.+++.++.||+.||.|||++||+
T Consensus 66 ~~~E~~~l~~l~hp~iv~~~~-~~~~~~---~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~iv 141 (311)
T 3niz_A 66 AIREISLLKELHHPNIVSLID-VIHSER---CLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRIL 141 (311)
T ss_dssp HHHHHHHHHHCCCTTBCCEEE-EECCSS---CEEEEEECCSEEHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHHHcCCCCEeeeee-EEccCC---EEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 347888999999999999999 555443 6799999976799999977666799999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.+||+|||++...+....
T Consensus 142 H~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~----------------------------------------------- 174 (311)
T 3niz_A 142 HRDLKPQNLLINSDGALKLADFGLARAFGIPVR----------------------------------------------- 174 (311)
T ss_dssp CCCCCGGGEEECTTCCEEECCCTTCEETTSCCC-----------------------------------------------
T ss_pred cCCCchHhEEECCCCCEEEccCcCceecCCCcc-----------------------------------------------
Confidence 999999999999999999999998844321100
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-CCCccccchhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLF 302 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGvll~ 302 (720)
......||+.|+|||++.+. .++.++|||||||++|
T Consensus 175 -------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ 211 (311)
T 3niz_A 175 -------------------------------------------SYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFA 211 (311)
T ss_dssp ----------------------------------------------CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHH
T ss_pred -------------------------------------------cccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHH
Confidence 00113679999999999874 4899999999999999
Q ss_pred hccc---cCCCCchHHHH--HHHhhcCCCCcc-------------------------c-cccCchHHHHHHHcCCCCCCC
Q 004998 303 ELFC---PFSTGEEKTRT--MSSLRHRVLPPQ-------------------------L-LLKFPKEASFCLWLLHPEPSG 351 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~--~~~l~~~~~p~~-------------------------~-~~~~p~~~~li~~~L~~dP~~ 351 (720)
+|++ ||......... +..+.....+.. . ....+...+||.+||++||.+
T Consensus 212 ~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~ 291 (311)
T 3niz_A 212 EMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNK 291 (311)
T ss_dssp HHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTT
T ss_pred HHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhH
Confidence 9999 67654332221 111111111111 0 112234459999999999999
Q ss_pred CCChHHHHcCcccCCCc
Q 004998 352 RPKMGELLQSEFLNEPR 368 (720)
Q Consensus 352 Rpta~eiL~hp~~~~~~ 368 (720)
|||+.|+|+||||+...
T Consensus 292 Rpt~~ell~hp~f~~~~ 308 (311)
T 3niz_A 292 RISARDAMNHPYFKDLD 308 (311)
T ss_dssp SCCHHHHHTSGGGTTSC
T ss_pred CCCHHHHhcCcccccCC
Confidence 99999999999999863
No 28
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=3.6e-35 Score=311.47 Aligned_cols=210 Identities=19% Similarity=0.248 Sum_probs=157.5
Q ss_pred ehhhhccc---CCCCCceecccceeecCC--CCCcEEEEEecCCCCHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHH
Q 004998 66 SDGVELTH---GDHLRNQGGLSGVCENEA--AIDPFVHAIEWGDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 66 ~e~~~Ls~---l~HpnIV~l~~~~~~~~~--~~~~~~lv~E~~ggsL~~~L~~~~-~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
+|..++.+ ++||||+++++ ++.... ....++++|||.+++|.+++.... ..+++.+++.++.||+.||.|||+
T Consensus 60 ~e~~~l~~l~~~~h~niv~~~~-~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~ 138 (308)
T 3g33_A 60 REVALLRRLEAFEHPNVVRLMD-VCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHA 138 (308)
T ss_dssp HHHHHHHHHHHHCCTTBCCEEE-EEEECCSSSEEEEEEEEECCCCBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhcCCCCeEEeee-eeeccCCCCceeEEEEehhhhcCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 45555555 45999999999 444332 223579999997789999995543 349999999999999999999999
Q ss_pred cCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004998 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||+||||||+|||++.++.+||+|||.+...+...
T Consensus 139 ~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~-------------------------------------------- 174 (308)
T 3g33_A 139 NCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQM-------------------------------------------- 174 (308)
T ss_dssp TTCCCSCCCTTTEEECTTSCEEECSCSCTTTSTTCC--------------------------------------------
T ss_pred CCcccCCCCHHHEEEcCCCCEEEeeCccccccCCCc--------------------------------------------
Confidence 999999999999999999999999998874321110
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhh
Q 004998 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
......||+.|+|||++.+..++.++|||||||
T Consensus 175 -----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~ 207 (308)
T 3g33_A 175 -----------------------------------------------ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGC 207 (308)
T ss_dssp -----------------------------------------------CSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHH
T ss_pred -----------------------------------------------ccCCccccccccCchHHcCCCCCchHHHHHHHH
Confidence 001146899999999999999999999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhc-CCCCcc-----------------------ccccC-chHHHHHHHcCCCCCCC
Q 004998 300 LLFELFC---PFSTGEEKTRTMSSLRH-RVLPPQ-----------------------LLLKF-PKEASFCLWLLHPEPSG 351 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~-~~~p~~-----------------------~~~~~-p~~~~li~~~L~~dP~~ 351 (720)
++|||++ ||............+.. +..++. ..... +...+||.+||++||.+
T Consensus 208 il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~ 287 (308)
T 3g33_A 208 IFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHK 287 (308)
T ss_dssp HHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTT
T ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCcc
Confidence 9999999 67665544333222221 111100 11122 33459999999999999
Q ss_pred CCChHHHHcCcccCCC
Q 004998 352 RPKMGELLQSEFLNEP 367 (720)
Q Consensus 352 Rpta~eiL~hp~~~~~ 367 (720)
|||+.|+|+||||+..
T Consensus 288 R~t~~e~l~h~~~~~~ 303 (308)
T 3g33_A 288 RISAFRALQHSYLHKD 303 (308)
T ss_dssp SCCHHHHHTSTTC---
T ss_pred CCCHHHHhcCccccCC
Confidence 9999999999999975
No 29
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.8e-35 Score=322.69 Aligned_cols=213 Identities=16% Similarity=0.251 Sum_probs=164.9
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCC---CCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAA---IDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~---~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
+..+|..+|.+++||||+++++ ++..... ...+|+||||.|++|.+++... .+++..++.++.||+.||.|||+
T Consensus 70 ~~~~E~~~l~~l~hpnIv~l~~-~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~--~l~~~~~~~~~~qi~~~L~~LH~ 146 (367)
T 1cm8_A 70 RAYRELRLLKHMRHENVIGLLD-VFTPDETLDDFTDFYLVMPFMGTDLGKLMKHE--KLGEDRIQFLVYQMLKGLRYIHA 146 (367)
T ss_dssp HHHHHHHHHHHCCBTTBCCCSE-EECSCSSTTTCCCCEEEEECCSEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCcCCCCcee-eEecCCccccCceEEEEEecCCCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH
Confidence 4458888999999999999999 5544322 2457999999999999999653 49999999999999999999999
Q ss_pred cCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004998 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||+||||||+|||++.++.+||+|||+++..+..
T Consensus 147 ~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~--------------------------------------------- 181 (367)
T 1cm8_A 147 AGIIHRDLKPGNLAVNEDCELKILDFGLARQADSE--------------------------------------------- 181 (367)
T ss_dssp TTEECCCCCGGGEEECTTCCEEECCCTTCEECCSS---------------------------------------------
T ss_pred CCccccCcCHHHEEEcCCCCEEEEeeecccccccc---------------------------------------------
Confidence 99999999999999999999999988887432110
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-CCCCccccchhhh
Q 004998 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLG 298 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sDIwSLG 298 (720)
....+||++|+|||++.+ ..++.++||||||
T Consensus 182 ------------------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG 213 (367)
T 1cm8_A 182 ------------------------------------------------MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVG 213 (367)
T ss_dssp ------------------------------------------------CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHH
T ss_pred ------------------------------------------------cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHH
Confidence 011468999999999987 5699999999999
Q ss_pred hhhhhccc---cCCCCchHHHHHHHhhc-CCCCc----------------------------cccccCchHHHHHHHcCC
Q 004998 299 VLLFELFC---PFSTGEEKTRTMSSLRH-RVLPP----------------------------QLLLKFPKEASFCLWLLH 346 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~-~~~p~----------------------------~~~~~~p~~~~li~~~L~ 346 (720)
|++|||++ ||.+..........+.. +..+. .+....+...+|+.+||+
T Consensus 214 ~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~ 293 (367)
T 1cm8_A 214 CIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLV 293 (367)
T ss_dssp HHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSC
T ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHcc
Confidence 99999999 67665443322222111 11111 111223455699999999
Q ss_pred CCCCCCCChHHHHcCcccCCCccch
Q 004998 347 PEPSGRPKMGELLQSEFLNEPRDSM 371 (720)
Q Consensus 347 ~dP~~Rpta~eiL~hp~~~~~~~~l 371 (720)
.||.+|||+.|+|+||||+...+..
T Consensus 294 ~dP~~R~t~~e~l~hp~f~~~~~~~ 318 (367)
T 1cm8_A 294 LDAEQRVTAGEALAHPYFESLHDTE 318 (367)
T ss_dssp SSTTTSCCHHHHHHSGGGTTTC---
T ss_pred CChhHCCCHHHHhcChHHHhhcCCc
Confidence 9999999999999999999875543
No 30
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=1.6e-35 Score=311.40 Aligned_cols=209 Identities=17% Similarity=0.245 Sum_probs=160.5
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.+|..++.+++||||+++++ ++.... .+|+||||.+++|.+++......+++..++.++.||+.||.|||++||+|
T Consensus 48 ~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H 123 (288)
T 1ob3_A 48 IREISILKELKHSNIVKLYD-VIHTKK---RLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLH 123 (288)
T ss_dssp HHHHHGGGGCCCTTBCCEEE-EEECSS---CEEEEEECCSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHhcCCCCEeeeee-EEccCC---eEEEEEEecCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 37888999999999999999 555443 68999999667999999766566999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+|||++.++.+||+|||.+...+....
T Consensus 124 ~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~------------------------------------------------ 155 (288)
T 1ob3_A 124 RDLKPQNLLINREGELKIADFGLARAFGIPVR------------------------------------------------ 155 (288)
T ss_dssp SCCCGGGEEECTTSCEEECCTTHHHHHCC---------------------------------------------------
T ss_pred CCCCHHHEEEcCCCCEEEeECccccccCcccc------------------------------------------------
Confidence 99999999999999999999988743211100
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC-CCccccchhhhhhhhh
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFE 303 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGvll~e 303 (720)
......||+.|+|||++.+.. ++.++|||||||++||
T Consensus 156 ------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ 193 (288)
T 1ob3_A 156 ------------------------------------------KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAE 193 (288)
T ss_dssp ------------------------------------------------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHH
T ss_pred ------------------------------------------ccccccccccccCchheeCCCCCCcHHHHHHHHHHHHH
Confidence 001136799999999997654 8999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhc-CCC--------------Cc-----------cccccCc-hHHHHHHHcCCCCCCCCC
Q 004998 304 LFC---PFSTGEEKTRTMSSLRH-RVL--------------PP-----------QLLLKFP-KEASFCLWLLHPEPSGRP 353 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~-~~~--------------p~-----------~~~~~~p-~~~~li~~~L~~dP~~Rp 353 (720)
|++ ||............... +.. .+ .+....+ ...+||.+||++||++||
T Consensus 194 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp 273 (288)
T 1ob3_A 194 MVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRI 273 (288)
T ss_dssp HHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSC
T ss_pred HHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhcccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCC
Confidence 999 67665544333322211 000 00 0111233 345999999999999999
Q ss_pred ChHHHHcCcccCCC
Q 004998 354 KMGELLQSEFLNEP 367 (720)
Q Consensus 354 ta~eiL~hp~~~~~ 367 (720)
|+.|+|+||||++.
T Consensus 274 t~~e~l~hp~f~~~ 287 (288)
T 1ob3_A 274 TAKQALEHAYFKEN 287 (288)
T ss_dssp CHHHHHTSGGGGC-
T ss_pred CHHHHhcCcchhhc
Confidence 99999999999863
No 31
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1e-35 Score=318.60 Aligned_cols=208 Identities=19% Similarity=0.256 Sum_probs=167.6
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..+|..++||||+++++ ++.+.. .+|+|||| .|++|.+++......+++.+++.++.||+.||.|||++||+
T Consensus 49 ~~E~~~l~~l~hpnIv~~~~-~~~~~~---~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~giv 124 (321)
T 1tki_A 49 KKEISILNIARHRNILHLHE-SFESME---ELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIG 124 (321)
T ss_dssp HHHHHHHHHSCCTTBCCEEE-EEEETT---EEEEEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHhCCCCCCCeEeE-EEecCC---EEEEEEEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
Confidence 36788999999999999999 555543 68999999 88999999976666699999999999999999999999999
Q ss_pred eccCCCCcEEEcc--CCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 144 VHNVRPSCFVMSS--FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 144 HrDLKP~NILl~~--~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
||||||+|||++. ++.+||+|||++.......
T Consensus 125 H~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~---------------------------------------------- 158 (321)
T 1tki_A 125 HFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD---------------------------------------------- 158 (321)
T ss_dssp CCCCCGGGEEESSSSCCCEEECCCTTCEECCTTC----------------------------------------------
T ss_pred cCCCCHHHEEEccCCCCCEEEEECCCCeECCCCC----------------------------------------------
Confidence 9999999999986 7899999888874321100
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......||+.|+|||++.+..++.++|||||||++
T Consensus 159 ---------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il 193 (321)
T 1tki_A 159 ---------------------------------------------NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLV 193 (321)
T ss_dssp ---------------------------------------------EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHH
T ss_pred ---------------------------------------------ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHH
Confidence 00114689999999999988899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCC--CccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRHRVL--PPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~--p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
|+|++ ||...... ..+..+..... ++......+ ...+|+.+||++||.+|||+.|+|+||||....
T Consensus 194 ~~ll~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~hp~~~~~~ 265 (321)
T 1tki_A 194 YVLLSGINPFLAETNQ-QIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQKI 265 (321)
T ss_dssp HHHHHSSCTTCCSSHH-HHHHHHHHTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHSCG
T ss_pred HHHHhCCCCCcCCCHH-HHHHHHHcCCCCCChhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhcChhhccCc
Confidence 99999 77665544 33444443332 222333444 445999999999999999999999999998763
No 32
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=1.4e-35 Score=317.34 Aligned_cols=201 Identities=14% Similarity=0.198 Sum_probs=164.1
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
+|..+|..++||||+++++ ++.+.. .+|+|||| .|++|.+++.+.. .+++..++.++.||+.||.|||++||+|
T Consensus 55 ~E~~~l~~l~hp~Iv~~~~-~~~~~~---~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~ivH 129 (318)
T 1fot_A 55 DERLMLSIVTHPFIIRMWG-TFQDAQ---QIFMIMDYIEGGELFSLLRKSQ-RFPNPVAKFYAAEVCLALEYLHSKDIIY 129 (318)
T ss_dssp HHHHHHHSCCBTTBCCEEE-EEECSS---EEEEEECCCCSCBHHHHHHHTS-SCCHHHHHHHHHHHHHHHHHHHTTTEEC
T ss_pred HHHHHHhhCCCCCCceEeE-EEEeCC---EEEEEEeCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 6777899999999999999 555543 68999999 8999999996544 4999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+|||++.+|++||+|||++......
T Consensus 130 rDlkp~NIll~~~g~~kL~Dfg~a~~~~~~-------------------------------------------------- 159 (318)
T 1fot_A 130 RDLKPENILLDKNGHIKITDFGFAKYVPDV-------------------------------------------------- 159 (318)
T ss_dssp CCCCGGGEEECTTSCEEECCCSSCEECSSC--------------------------------------------------
T ss_pred cCCChheEEEcCCCCEEEeecCcceecCCc--------------------------------------------------
Confidence 999999999999999999988887321100
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhc
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 304 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eL 304 (720)
....+||+.|+|||++.+..++.++|||||||++|||
T Consensus 160 -------------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el 196 (318)
T 1fot_A 160 -------------------------------------------TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEM 196 (318)
T ss_dssp -------------------------------------------BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHH
T ss_pred -------------------------------------------cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHH
Confidence 0014789999999999999999999999999999999
Q ss_pred cc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCC
Q 004998 305 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 367 (720)
Q Consensus 305 lt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~ 367 (720)
++ ||...... ..+..+....+. ++..+ +...+||.+||..||.+|| +++++++||||+..
T Consensus 197 l~g~~pf~~~~~~-~~~~~i~~~~~~--~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~hp~f~~~ 265 (318)
T 1fot_A 197 LAGYTPFYDSNTM-KTYEKILNAELR--FPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEV 265 (318)
T ss_dssp HHSSCTTCCSSHH-HHHHHHHHCCCC--CCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGGGSSC
T ss_pred HhCCCCCCCCCHH-HHHHHHHhCCCC--CCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcCccccCC
Confidence 99 67665544 333333333221 12223 4456999999999999999 89999999999976
No 33
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.1e-35 Score=326.45 Aligned_cols=235 Identities=16% Similarity=0.199 Sum_probs=166.7
Q ss_pred eeeehhhhcccCC-CCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~-HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.++. |||||++++ ++.... ...+|+||||.+++|.+++... .+++..+..++.||+.||.|||++|
T Consensus 54 ~~~~E~~~l~~l~~h~niv~l~~-~~~~~~-~~~~~lv~e~~~~~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~LH~~~ 129 (388)
T 3oz6_A 54 RTFREIMILTELSGHENIVNLLN-VLRADN-DRDVYLVFDYMETDLHAVIRAN--ILEPVHKQYVVYQLIKVIKYLHSGG 129 (388)
T ss_dssp HHHHHHHHHHHTTTCTTBCCEEE-EEECTT-SSCEEEEEECCSEEHHHHHHHT--CCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhccCCCCCCeeee-EEecCC-CCEEEEEecccCcCHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 4557888999987 999999999 554332 2368999999778999999653 4999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||+++.......... ..
T Consensus 130 ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~-----------------------------~~----------- 169 (388)
T 3oz6_A 130 LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTN-----------------------------NI----------- 169 (388)
T ss_dssp EECCCCCGGGEEECTTCCEEECCCTTCEESSSCCCCCC-----------------------------CG-----------
T ss_pred EEeCCCCHHHeEEcCCCCEEecCCcccccccccccccc-----------------------------cc-----------
Confidence 99999999999999999999999999865422110000 00
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-CCCCccccchhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVL 300 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sDIwSLGvl 300 (720)
+.......... ..........+||++|+|||++.+ ..|+.++|||||||+
T Consensus 170 ---------------~~~~~~~~~~~--------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~i 220 (388)
T 3oz6_A 170 ---------------PLSINENTENF--------------DDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCI 220 (388)
T ss_dssp ---------------GGCCC-----------------------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHH
T ss_pred ---------------ccccccccccc--------------ccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHH
Confidence 00000000000 000001123589999999999987 558999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCcc--------------------------------c-------------cc
Q 004998 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQ--------------------------------L-------------LL 332 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p~~--------------------------------~-------------~~ 332 (720)
+|||++ ||.+..........+.....|+. + ..
T Consensus 221 l~ell~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (388)
T 3oz6_A 221 LGEILCGKPIFPGSSTMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKAD 300 (388)
T ss_dssp HHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCC
T ss_pred HHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhccccccccc
Confidence 999999 67665544333222221111110 0 02
Q ss_pred cCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCccc
Q 004998 333 KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 333 ~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
..+...+||.+||.+||.+|||+.|+|+||||+....+
T Consensus 301 ~~~~~~dll~~~L~~dP~~R~t~~e~l~Hp~~~~~~~~ 338 (388)
T 3oz6_A 301 CNEEALDLLDKLLQFNPNKRISANDALKHPFVSIFHNP 338 (388)
T ss_dssp CCHHHHHHHHHHCCSSGGGSCCHHHHTTSTTTTTTCCG
T ss_pred CCHHHHHHHHHhhccCcccCCCHHHHhCCHHHHHhcCC
Confidence 23445699999999999999999999999999876544
No 34
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.4e-35 Score=321.15 Aligned_cols=209 Identities=20% Similarity=0.323 Sum_probs=161.7
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++||||+++++ +++... .+|+|||| .|++|.+++...+ .+++.+++.++.||+.||.|||++|
T Consensus 54 ~~~~Ei~~l~~l~hpnIv~l~~-~~~~~~---~~~lv~E~~~gg~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH~~g 128 (347)
T 3zgw_A 54 RIKTEIEALKNLRHQHICQLYH-VLETAN---KIFMVLEYCPGGELFDYIISQD-RLSEEETRVVFRQIVSAVAYVHSQG 128 (347)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEE-EEECSS---EEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCEeeEEE-EEEeCC---EEEEEEeCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 4457888999999999999999 555543 57999999 7999999995543 4999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||++....... +.
T Consensus 129 ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~---------------------------------~~----------- 164 (347)
T 3zgw_A 129 YAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNK---------------------------------DY----------- 164 (347)
T ss_dssp CBCCCCCGGGEEECTTSCEEECCCTTCBC---------------------------------------------------
T ss_pred eEeCCccHHHEEEcCCCCEEEEeccCcccccCCC---------------------------------Cc-----------
Confidence 9999999999999999999999999874321110 00
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCC-Cccccchhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYRLGVL 300 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~-s~~sDIwSLGvl 300 (720)
.....+||+.|+|||++.+..+ +.++|||||||+
T Consensus 165 ---------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~i 199 (347)
T 3zgw_A 165 ---------------------------------------------HLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGIL 199 (347)
T ss_dssp ----------------------------------------------------CGGGCCHHHHTTC---CCHHHHHHHHHH
T ss_pred ---------------------------------------------cccccCCccCccCHHHHcCCCCCCcHhHHHHHHHH
Confidence 0011478999999999998875 899999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
+|+|++ ||...... .....+..+.++. .....+...+||.+||.+||.+|||+.|+++||||...
T Consensus 200 l~ell~g~~Pf~~~~~~-~~~~~i~~~~~~~-p~~~s~~~~~li~~~L~~dP~~Rps~~eil~hp~~~~~ 267 (347)
T 3zgw_A 200 LYVLMCGFLPFDDDNVM-ALYKKIMRGKYDV-PKWLSPSSILLLQQMLQVDPKKRISMKNLLNHPWIMQD 267 (347)
T ss_dssp HHHHHHSSCSSCCSSHH-HHHHHHHHTCCCC-CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHTCHHHHTT
T ss_pred HHHHHHCCCCCCCCCHH-HHHHHHHcCCCCC-CCCCCHHHHHHHHHHcccCHhHCcCHHHHhcCcchhcC
Confidence 999999 67665444 3344444333221 11123455699999999999999999999999999875
No 35
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.9e-35 Score=314.64 Aligned_cols=207 Identities=18% Similarity=0.269 Sum_probs=165.4
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..+|.+++||||+++++ ++.+.. .+|+|||| .|++|.+++... ..+++.+++.++.||+.||.|||++||
T Consensus 61 ~~~E~~~l~~l~hp~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~al~~lH~~~i 135 (326)
T 2y0a_A 61 IEREVSILKEIQHPNVITLHE-VYENKT---DVILILELVAGGELFDFLAEK-ESLTEEEATEFLKQILNGVYYLHSLQI 135 (326)
T ss_dssp HHHHHHHHHHCCCTTBCCEEE-EEECSS---EEEEEEECCCSCBHHHHHTTS-SCCBHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHhCCCCCCCcEEE-EEEeCC---EEEEEEEcCCCCCHHHHHHhc-CCcCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 347888999999999999999 555543 67999999 799999999544 459999999999999999999999999
Q ss_pred eeccCCCCcEEEccCC----ceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCC
Q 004998 143 VVHNVRPSCFVMSSFN----HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 143 vHrDLKP~NILl~~~~----~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
+||||||+|||++.++ .+||+|||++.......
T Consensus 136 vH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~------------------------------------------- 172 (326)
T 2y0a_A 136 AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN------------------------------------------- 172 (326)
T ss_dssp ECCCCCGGGEEESCSSSSSCCEEECCCTTCEECCTTS-------------------------------------------
T ss_pred EcCCCCHHHEEEecCCCCCCCEEEEECCCCeECCCCC-------------------------------------------
Confidence 9999999999999877 79998888874321100
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhh
Q 004998 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
......||+.|+|||++.+..++.++||||||
T Consensus 173 ------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG 204 (326)
T 2y0a_A 173 ------------------------------------------------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIG 204 (326)
T ss_dssp ------------------------------------------------CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHH
T ss_pred ------------------------------------------------ccccccCCcCcCCceeecCCCCCcHHHHHHHH
Confidence 00114689999999999988899999999999
Q ss_pred hhhhhccc---cCCCCchHHHHHHHhhc--CCCCccccccCch-HHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 299 VLLFELFC---PFSTGEEKTRTMSSLRH--RVLPPQLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~--~~~p~~~~~~~p~-~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|++|+|++ ||...... .....+.. ..+++......+. ..+||.+||++||.+|||+.|+|+||||...
T Consensus 205 ~il~~ll~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~ 278 (326)
T 2y0a_A 205 VITYILLSGASPFLGDTKQ-ETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPK 278 (326)
T ss_dssp HHHHHHHHSCCSSCCSSHH-HHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHSTTTSCC
T ss_pred HHHHHHHHCcCCCCCCCHH-HHHHHHHhcCCCcCccccccCCHHHHHHHHHHccCChhhCCCHHHHhcCCCccCC
Confidence 99999999 67655443 23333332 2233333334444 4599999999999999999999999999875
No 36
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=2.5e-35 Score=317.84 Aligned_cols=206 Identities=18% Similarity=0.266 Sum_probs=165.3
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..+|..++||||+++++ ++.+.. .+|+|||| .|++|.+++.+.. .+++..++.++.||+.||.|||++||
T Consensus 52 ~~~E~~~l~~l~hp~iv~l~~-~~~~~~---~~~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~i 126 (337)
T 1o6l_A 52 TVTESRVLQNTRHPFLTALKY-AFQTHD---RLCFVMEYANGGELFFHLSRER-VFTEERARFYGAEIVSALEYLHSRDV 126 (337)
T ss_dssp HHHHHHHHHSCCCTTBCCEEE-EEECSS---EEEEEEECCTTCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhCCCCcCcceEE-EEEeCC---EEEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 346777899999999999999 555543 68999999 8999999995543 49999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.+|++||+|||+++.......
T Consensus 127 vHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~---------------------------------------------- 160 (337)
T 1o6l_A 127 VYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA---------------------------------------------- 160 (337)
T ss_dssp BCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTC----------------------------------------------
T ss_pred ecCcCCHHHEEECCCCCEEEeeccchhhcccCCC----------------------------------------------
Confidence 9999999999999999999999988743211100
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
.....+||+.|+|||++.+..++.++|||||||++|
T Consensus 161 --------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ 196 (337)
T 1o6l_A 161 --------------------------------------------TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMY 196 (337)
T ss_dssp --------------------------------------------CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHH
T ss_pred --------------------------------------------cccccccChhhCChhhhcCCCCCchhhcccchhHHH
Confidence 001147899999999999988999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCCCCcccccc-CchHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCC
Q 004998 303 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLK-FPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 367 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~-~p~~~~li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~ 367 (720)
||++ ||...... .....+....+ .++.. .+...+||.+||+.||.+|| ++.|+++||||...
T Consensus 197 ell~g~~Pf~~~~~~-~~~~~i~~~~~--~~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h~~f~~~ 267 (337)
T 1o6l_A 197 EMMCGRLPFYNQDHE-RLFELILMEEI--RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSI 267 (337)
T ss_dssp HHHHSSCSSCCSSHH-HHHHHHHHCCC--CCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTC
T ss_pred HHhcCCCCCCCCCHH-HHHHHHHcCCC--CCCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcCCCcCCC
Confidence 9999 77665443 33333333221 12222 34455999999999999999 89999999999876
No 37
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=2.3e-35 Score=321.34 Aligned_cols=208 Identities=19% Similarity=0.225 Sum_probs=165.0
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++|||||++++ ++.+.. .+|+|||| .|++|.+++... ..+++.+++.++.||+.||.|||++|
T Consensus 74 ~~~~E~~il~~l~hpnIv~~~~-~~~~~~---~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~al~~lH~~~ 148 (362)
T 2bdw_A 74 KLEREARICRKLQHPNIVRLHD-SIQEES---FHYLVFDLVTGGELFEDIVAR-EFYSEADASHCIQQILESIAYCHSNG 148 (362)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EEECSS---EEEEEECCCCSCBHHHHHTTC-SCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCCCeEEE-EEEeCC---EEEEEEecCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3447888999999999999999 555543 67999999 889999999554 35999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCC---ceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCC
Q 004998 142 IVVHNVRPSCFVMSSFN---HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~---~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
|+||||||+|||++.++ .+||+|||++.......
T Consensus 149 ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~~------------------------------------------- 185 (362)
T 2bdw_A 149 IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE------------------------------------------- 185 (362)
T ss_dssp CBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTCC-------------------------------------------
T ss_pred eEeccCchHHEEEecCCCCCCEEEeecCcceEecCCc-------------------------------------------
Confidence 99999999999998654 59999888874321110
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhh
Q 004998 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
......||+.|+|||++.+..++.++||||||
T Consensus 186 ------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG 217 (362)
T 2bdw_A 186 ------------------------------------------------AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACG 217 (362)
T ss_dssp ------------------------------------------------SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHH
T ss_pred ------------------------------------------------ccccCCCCccccCHHHHccCCCCchhhHHHHH
Confidence 00114689999999999998899999999999
Q ss_pred hhhhhccc---cCCCCchHHHHHHHhhcCC--CCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 299 VLLFELFC---PFSTGEEKTRTMSSLRHRV--LPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~--~p~~~~~~~-p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|++|+|++ ||...... .....+..+. ++....... +...+||.+||++||.+|||+.|+|+||||...
T Consensus 218 ~il~~ll~g~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~ 291 (362)
T 2bdw_A 218 VILYILLVGYPPFWDEDQH-RLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICNR 291 (362)
T ss_dssp HHHHHHHHSSCSSCCSSHH-HHHHHHHHTCCCCCTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTSHHHHTH
T ss_pred HHHHHHHHCCCCCCCCCHH-HHHHHHHhCCCCCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcccCCC
Confidence 99999999 66655443 3444444332 233333333 445599999999999999999999999999763
No 38
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=1.8e-35 Score=332.06 Aligned_cols=244 Identities=15% Similarity=0.194 Sum_probs=162.7
Q ss_pred eeeehhhhcccCCCCCceecccceeecC-CCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENE-AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~-~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++|||||++++++.... .....+|+||||.+++|.+++.... .+++..++.|++||+.||.|||++|
T Consensus 98 ~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~-~l~~~~~~~~~~qi~~aL~~LH~~~ 176 (458)
T 3rp9_A 98 RILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPV-YLTELHIKTLLYNLLVGVKYVHSAG 176 (458)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEECCCSEEHHHHHHSSC-CCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCCCceEEEEecCCcccCceEEEEEeccccchhhhcccCC-CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 4447889999999999999999443222 3345689999998899999996544 4999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
||||||||+||||+.++.+||+|||+++..+.......... .........+.+|+...
T Consensus 177 iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~------- 234 (458)
T 3rp9_A 177 ILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLP---------------ISPREDDMNLVTFPHTK------- 234 (458)
T ss_dssp CBCCCCCGGGEEECTTCCEEECCCTTCBCTTSCTTCCCCCC---------------------------------------
T ss_pred cCCCCCChhhEEECCCCCEeecccccchhccCccccccccc---------------cCccccccccccccccc-------
Confidence 99999999999999999999999999976543311100000 00000000000110000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCcccc-CCCCCccccchhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-GAPVSCASDIYRLGVL 300 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~-~~~~s~~sDIwSLGvl 300 (720)
......+..+||++|+|||++. +..|+.++|||||||+
T Consensus 235 -----------------------------------------~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~i 273 (458)
T 3rp9_A 235 -----------------------------------------NLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCI 273 (458)
T ss_dssp ---------------------------------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHH
T ss_pred -----------------------------------------cccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHH
Confidence 0000112368999999999864 5569999999999999
Q ss_pred hhhccc--------------cCCCCch-------------------HHHHHHHhhc--C--------------------C
Q 004998 301 LFELFC--------------PFSTGEE-------------------KTRTMSSLRH--R--------------------V 325 (720)
Q Consensus 301 l~eLlt--------------pf~~~~~-------------------~~~~~~~l~~--~--------------------~ 325 (720)
||||++ +|.+... ....+..+.. + .
T Consensus 274 l~elltg~~~~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~ 353 (458)
T 3rp9_A 274 FAELLNMIKENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRI 353 (458)
T ss_dssp HHHHHTTSTTTCSSGGGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTT
T ss_pred HHHHHHhccccccccccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHh
Confidence 999996 1222110 0000110000 0 0
Q ss_pred C--------CccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCccc
Q 004998 326 L--------PPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 326 ~--------p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
+ ...+....+...+||.+||.+||.+|||++|+|+||||+.....
T Consensus 354 ~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~Hp~f~~~~~~ 406 (458)
T 3rp9_A 354 FPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKEVRIA 406 (458)
T ss_dssp SCCCCCCCGGGGSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTCCG
T ss_pred cCCCCCCCHHHHCCCCCHHHHHHHHHHhccCccccCCHHHHhcCHhhhhcCCC
Confidence 0 01112224455699999999999999999999999999987554
No 39
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=6.3e-36 Score=324.61 Aligned_cols=204 Identities=17% Similarity=0.284 Sum_probs=162.1
Q ss_pred ehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 66 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
+|..+|..+ +||||+++++ ++.+.. .+|+|||| .|++|.+++.+.. .+++.+++.|+.||+.||.|||++||+
T Consensus 72 ~E~~il~~~~~hp~Iv~l~~-~~~~~~---~~~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~giv 146 (353)
T 3txo_A 72 TEKRILSLARNHPFLTQLFC-CFQTPD---RLFFVMEFVNGGDLMFHIQKSR-RFDEARARFYAAEIISALMFLHDKGII 146 (353)
T ss_dssp HHHHHHHHTTTCTTBCCEEE-EEECSS---EEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTCB
T ss_pred HHHHHHHhccCCCceeeEEE-EEEeCC---EEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCCc
Confidence 566677776 7999999999 565554 58999999 8999999995543 499999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.+|++||+|||+++......
T Consensus 147 HrDlkp~NILl~~~g~ikL~DFG~a~~~~~~~------------------------------------------------ 178 (353)
T 3txo_A 147 YRDLKLDNVLLDHEGHCKLADFGMCKEGICNG------------------------------------------------ 178 (353)
T ss_dssp CCCCCGGGEEECTTSCEEECCCTTCBCSCC--------------------------------------------------
T ss_pred ccCCCHHHEEECCCCCEEEccccceeecccCC------------------------------------------------
Confidence 99999999999999999999998874321100
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......+||+.|+|||++.+..|+.++|||||||++||
T Consensus 179 ------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e 216 (353)
T 3txo_A 179 ------------------------------------------VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYE 216 (353)
T ss_dssp -------------------------------------------------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHH
T ss_pred ------------------------------------------ccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHH
Confidence 00012478999999999998889999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCCC-CccccccCchHHHHHHHcCCCCCCCCCCh------HHHHcCcccCCC
Q 004998 304 LFC---PFSTGEEKTRTMSSLRHRVL-PPQLLLKFPKEASFCLWLLHPEPSGRPKM------GELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~~~-p~~~~~~~p~~~~li~~~L~~dP~~Rpta------~eiL~hp~~~~~ 367 (720)
|++ ||...... ..+..+....+ .|. ...+...+||.+||.+||.+||++ .|+++||||+..
T Consensus 217 ll~G~~Pf~~~~~~-~~~~~i~~~~~~~p~--~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~hp~f~~~ 287 (353)
T 3txo_A 217 MLCGHAPFEAENED-DLFEAILNDEVVYPT--WLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKEI 287 (353)
T ss_dssp HHHSSCSSCCSSHH-HHHHHHHHCCCCCCT--TSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTSGGGTTC
T ss_pred HHhCCCCCCCCCHH-HHHHHHHcCCCCCCC--CCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhhCCcccCC
Confidence 999 77766554 34444443322 111 123455699999999999999998 899999999986
No 40
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=4.6e-35 Score=307.75 Aligned_cols=211 Identities=14% Similarity=0.148 Sum_probs=171.1
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++||||+++++.+.........+|+|||| .+++|.+++... ..+++..++.++.||+.||.|||++|
T Consensus 71 ~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~ 149 (290)
T 1t4h_A 71 RFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRF-KVMKIKVLRSWCRQILKGLQFLHTRT 149 (290)
T ss_dssp HHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHTSS
T ss_pred HHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEEEEecCCCCHHHHHHHc-cCCCHHHHHHHHHHHHHHHHHHHcCC
Confidence 3347888999999999999999444444444568999999 789999999553 34999999999999999999999999
Q ss_pred --ceeccCCCCcEEEc-cCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCC
Q 004998 142 --IVVHNVRPSCFVMS-SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 142 --IvHrDLKP~NILl~-~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
|+||||||+|||++ .++.+||+|||.+......
T Consensus 150 ~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~~~-------------------------------------------- 185 (290)
T 1t4h_A 150 PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS-------------------------------------------- 185 (290)
T ss_dssp SCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTT--------------------------------------------
T ss_pred CCEEECCCCHHHEEEECCCCCEEEeeCCCccccccc--------------------------------------------
Confidence 99999999999998 7899999988877321110
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhh
Q 004998 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
......||+.|+|||++.+. ++.++||||||
T Consensus 186 ------------------------------------------------~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG 216 (290)
T 1t4h_A 186 ------------------------------------------------FAKAVIGTPEFMAPEMYEEK-YDESVDVYAFG 216 (290)
T ss_dssp ------------------------------------------------SBEESCSSCCCCCGGGGGTC-CCTHHHHHHHH
T ss_pred ------------------------------------------------ccccccCCcCcCCHHHHhcc-CCCcchHHHHH
Confidence 00114689999999998754 89999999999
Q ss_pred hhhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 299 VLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|++|+|++ ||............+.....+..+....+ ...+||.+||++||.+|||+.|+|+||||++.
T Consensus 217 ~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~f~~~ 289 (290)
T 1t4h_A 217 MCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQEE 289 (290)
T ss_dssp HHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC--
T ss_pred HHHHHHHhCCCCCCCcCcHHHHHHHHhccCCccccCCCCCHHHHHHHHHHccCChhhCCCHHHHhhCcccccC
Confidence 99999999 77766666666666766666666655554 45699999999999999999999999999864
No 41
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=1.5e-35 Score=330.26 Aligned_cols=209 Identities=15% Similarity=0.196 Sum_probs=166.8
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
+|..+|..++||||+++++ ++.+.. .+|+|||| .|++|.++|.+....+++..++.|+.||+.||.|||++||||
T Consensus 123 ~E~~il~~~~hp~Iv~l~~-~~~~~~---~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~giiH 198 (437)
T 4aw2_A 123 EERDVLVNGDSKWITTLHY-AFQDDN---NLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVH 198 (437)
T ss_dssp HHHHHHHHSCTTTBCCEEE-EEECSS---EEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhCCCCCEEEEEE-EEeeCC---EEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhCCeEe
Confidence 5666888999999999999 665554 57999999 899999999775566999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+||||+.++++||+|||+++.......
T Consensus 199 rDLKp~NILl~~~g~vkL~DFGla~~~~~~~~------------------------------------------------ 230 (437)
T 4aw2_A 199 RDIKPDNILMDMNGHIRLADFGSCLKLMEDGT------------------------------------------------ 230 (437)
T ss_dssp CCCSGGGEEECTTSCEEECCCTTCEECCTTSC------------------------------------------------
T ss_pred cccCHHHeeEcCCCCEEEcchhhhhhcccCCC------------------------------------------------
Confidence 99999999999999999999988743211100
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCcccc-----CCCCCccccchhhhh
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-----GAPVSCASDIYRLGV 299 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~-----~~~~s~~sDIwSLGv 299 (720)
......+||++|+|||++. ...|+.++|||||||
T Consensus 231 -----------------------------------------~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGv 269 (437)
T 4aw2_A 231 -----------------------------------------VQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGV 269 (437)
T ss_dssp -----------------------------------------EECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHH
T ss_pred -----------------------------------------cccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHH
Confidence 0001147999999999997 455899999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhh---cCCCCccccccCchHHHHHHHcCCCCCCC--CCChHHHHcCcccCCC
Q 004998 300 LLFELFC---PFSTGEEKTRTMSSLR---HRVLPPQLLLKFPKEASFCLWLLHPEPSG--RPKMGELLQSEFLNEP 367 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~---~~~~p~~~~~~~p~~~~li~~~L~~dP~~--Rpta~eiL~hp~~~~~ 367 (720)
++|||++ ||............+. ...+|.......+...+||.+||..+|.+ ||+++|+++||||+..
T Consensus 270 il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~Hpff~~i 345 (437)
T 4aw2_A 270 CMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKHPFFSGI 345 (437)
T ss_dssp HHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCCSSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTSGGGTTC
T ss_pred HHHHHHhCCCCCCCCChhHHHHhhhhccccccCCcccccCCHHHHHHHHHHhcccccccCCCCHHHHhCCCccCCC
Confidence 9999999 7776554433222222 22344443344456669999999998888 9999999999999986
No 42
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=9.5e-35 Score=314.20 Aligned_cols=220 Identities=15% Similarity=0.207 Sum_probs=166.4
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCC-----CCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHH
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAA-----IDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAA 137 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~-----~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yL 137 (720)
+..+|..+|..++||||+++++ ++..... ...+|+||||.+++|.+.+......+++.+++.++.||+.||.||
T Consensus 62 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~L 140 (351)
T 3mi9_A 62 TALREIKILQLLKHENVVNLIE-ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYI 140 (351)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EEEEC--------CEEEEEEECCSEEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCCcccHhh-eeeccccccccCCceEEEEEeccCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHH
Confidence 3447888999999999999999 5544321 346899999977799999977666799999999999999999999
Q ss_pred HHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCC
Q 004998 138 HSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 138 Hs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~ 217 (720)
|++||+||||||+|||++.++.+||+|||++.........
T Consensus 141 H~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~---------------------------------------- 180 (351)
T 3mi9_A 141 HRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNS---------------------------------------- 180 (351)
T ss_dssp HHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCCCSSS----------------------------------------
T ss_pred HHCCeeCCCCCHHHEEEcCCCCEEEccchhcccccccccc----------------------------------------
Confidence 9999999999999999999999999999988543221000
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-CCCccccchh
Q 004998 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYR 296 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwS 296 (720)
.+.......||+.|+|||++.+. .++.++||||
T Consensus 181 ----------------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Diws 214 (351)
T 3mi9_A 181 ----------------------------------------------QPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWG 214 (351)
T ss_dssp ----------------------------------------------SCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHH
T ss_pred ----------------------------------------------cccccCCcccccCccCchhhcCCCCCCcHhHHHH
Confidence 00000124789999999999874 4899999999
Q ss_pred hhhhhhhccc---cCCCCchHHHHH--HHhhcCCCCcccccc-----------------------------CchHHHHHH
Q 004998 297 LGVLLFELFC---PFSTGEEKTRTM--SSLRHRVLPPQLLLK-----------------------------FPKEASFCL 342 (720)
Q Consensus 297 LGvll~eLlt---pf~~~~~~~~~~--~~l~~~~~p~~~~~~-----------------------------~p~~~~li~ 342 (720)
|||++|||++ ||.......... ..+. +.+++..... .+...+||.
T Consensus 215 lG~il~ell~g~~pf~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 293 (351)
T 3mi9_A 215 AGCIMAEMWTRSPIMQGNTEQHQLALISQLC-GSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLID 293 (351)
T ss_dssp HHHHHHHHHHSSCSCCCSSHHHHHHHHHHHH-CCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCCCChHHHHHHHHHHh-CCCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHH
Confidence 9999999999 666554332221 1121 2222221111 234569999
Q ss_pred HcCCCCCCCCCChHHHHcCcccCCCccc
Q 004998 343 WLLHPEPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 343 ~~L~~dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
+||++||.+|||+.|+|+||||.....+
T Consensus 294 ~~L~~dP~~R~t~~e~l~hp~f~~~~~~ 321 (351)
T 3mi9_A 294 KLLVLDPAQRIDSDDALNHDFFWSDPMP 321 (351)
T ss_dssp HHSCSSGGGSCCHHHHHTSGGGGSSSCC
T ss_pred HHhcCChhhCCCHHHHhCCCCcCCCCCc
Confidence 9999999999999999999999876443
No 43
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=2.7e-35 Score=319.23 Aligned_cols=202 Identities=13% Similarity=0.124 Sum_probs=165.3
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..+|..++||||+++++ ++.+.. .+|+|||| .|++|.+++.+.+ .+++..++.++.||+.||.|||++||+
T Consensus 89 ~~E~~~l~~l~hp~iv~~~~-~~~~~~---~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~iv 163 (350)
T 1rdq_E 89 LNEKRILQAVNFPFLVKLEF-SFKDNS---NLYMVMEYVAGGEMFSHLRRIG-RFSEPHARFYAAQIVLTFEYLHSLDLI 163 (350)
T ss_dssp HHHHHHHTTCCCTTBCCEEE-EEECSS---EEEEEEECCTTCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHhCCCCCCCeEEE-EEEcCC---EEEEEEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 36778999999999999999 555543 68999999 8999999996543 499999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.+|++||+|||++......
T Consensus 164 HrDlkp~NIll~~~g~~kL~DFg~a~~~~~~------------------------------------------------- 194 (350)
T 1rdq_E 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------------------------------------------------- 194 (350)
T ss_dssp CCCCSGGGEEECTTSCEEECCCTTCEECSSC-------------------------------------------------
T ss_pred cccCccceEEECCCCCEEEcccccceeccCC-------------------------------------------------
Confidence 9999999999999999999988887322100
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
....+||+.|+|||++.+..++.++|||||||++||
T Consensus 195 --------------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e 230 (350)
T 1rdq_E 195 --------------------------------------------TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYE 230 (350)
T ss_dssp --------------------------------------------BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHH
T ss_pred --------------------------------------------cccccCCccccCHHHhcCCCCCCcCCEecccHhHhH
Confidence 011478999999999999999999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCC-----hHHHHcCcccCCC
Q 004998 304 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rpt-----a~eiL~hp~~~~~ 367 (720)
|++ ||...... ..+..+..+.++ ++..+ +...+||.+||+.||.+||+ +.||++||||...
T Consensus 231 ll~g~~Pf~~~~~~-~~~~~i~~~~~~--~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h~~f~~~ 300 (350)
T 1rdq_E 231 MAAGYPPFFADQPI-QIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATT 300 (350)
T ss_dssp HHHSSCSSCCSSHH-HHHHHHHHCCCC--CCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGGTTC
T ss_pred HhhCCCCCCCCCHH-HHHHHHHcCCCC--CCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhCcCcCCC
Confidence 999 67665443 444444443221 22233 44559999999999999998 9999999999875
No 44
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=5.3e-36 Score=323.03 Aligned_cols=206 Identities=17% Similarity=0.209 Sum_probs=161.4
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
+..+|..+|..++||||+++++ ++.... .+|+||||.+++|.+++...+ .+++.+++.++.||+.||.|||++||
T Consensus 55 ~~~~E~~~l~~l~hpnIv~l~~-~~~~~~---~~~lv~E~~~g~l~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH~~gi 129 (336)
T 3h4j_B 55 RVEREISYLKLLRHPHIIKLYD-VITTPT---DIVMVIEYAGGELFDYIVEKK-RMTEDEGRRFFQQIICAIEYCHRHKI 129 (336)
T ss_dssp HHHHHHHHHTTCCCTTBCCEEE-EEECSS---EEEEEECCCCEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHhCCCCCCCeEEE-EEEeCC---EEEEEEECCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 4457888999999999999999 555543 579999998899999995443 49999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.+||+|||++...... .+
T Consensus 130 vH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~----------------------------------~~------------ 163 (336)
T 3h4j_B 130 VHRDLKPENLLLDDNLNVKIADFGLSNIMTDG----------------------------------NF------------ 163 (336)
T ss_dssp CCCCCSTTTEEECTTCCEEECCSSCTBTTTTS----------------------------------BT------------
T ss_pred EecCCchhhEEEcCCCCEEEEEeccceeccCC----------------------------------cc------------
Confidence 99999999999999999999999887432111 00
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCC-Cccccchhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYRLGVLL 301 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~-s~~sDIwSLGvll 301 (720)
....+||+.|+|||++.+..+ ++++|||||||++
T Consensus 164 ---------------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il 198 (336)
T 3h4j_B 164 ---------------------------------------------LKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVL 198 (336)
T ss_dssp ---------------------------------------------TCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHH
T ss_pred ---------------------------------------------cccccCCcCcCCHHHHcCCCCCCCccchhHHHHHH
Confidence 011468999999999998875 7899999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCcccccc-CchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLK-FPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~-~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|+|++ ||...... .....+.... ..++.. .+...+||.+||.+||.+|||+.|+++||||+..
T Consensus 199 ~~ll~g~~Pf~~~~~~-~~~~~i~~~~--~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~~ 265 (336)
T 3h4j_B 199 YVMLVGRLPFDDEFIP-NLFKKVNSCV--YVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRDPWFNVN 265 (336)
T ss_dssp HHHHHSSCSSBCSSST-TCBCCCCSSC--CCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTCHHHHTT
T ss_pred HHHHhCCCCCCCccHH-HHHHHHHcCC--CCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhChhhccC
Confidence 99999 66543221 1111111111 112222 3445599999999999999999999999999865
No 45
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=5.4e-35 Score=326.78 Aligned_cols=208 Identities=18% Similarity=0.230 Sum_probs=166.0
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++|||||++++ ++.+.. .+|+|||| .|++|.+++.... .+++.++..++.||+.||.|||++|
T Consensus 56 ~~~~E~~il~~l~hpnIv~l~~-~~~~~~---~~~lv~E~~~gg~L~~~i~~~~-~~~e~~~~~i~~qil~aL~~lH~~g 130 (444)
T 3soa_A 56 KLEREARICRLLKHPNIVRLHD-SISEEG---HHYLIFDLVTGGELFEDIVARE-YYSEADASHCIQQILEAVLHCHQMG 130 (444)
T ss_dssp HHHHHHHHHHHCCBTTBCCEEE-EEECSS---EEEEEECCCBCCBHHHHHHHCS-CCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCcCCCeEEE-EEEECC---EEEEEEEeCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3447888999999999999999 555543 67999999 8999999995544 4999999999999999999999999
Q ss_pred ceeccCCCCcEEEc---cCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCC
Q 004998 142 IVVHNVRPSCFVMS---SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 142 IvHrDLKP~NILl~---~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
|+||||||+|||++ .++.+||+|||++........
T Consensus 131 ivHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~~------------------------------------------ 168 (444)
T 3soa_A 131 VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQ------------------------------------------ 168 (444)
T ss_dssp CBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTCC------------------------------------------
T ss_pred ccccCCCHHHEEEeccCCCCcEEEccCceeEEecCCCc------------------------------------------
Confidence 99999999999998 457899999888743321100
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhh
Q 004998 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
......||+.|+|||++.+..|+.++||||||
T Consensus 169 ------------------------------------------------~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlG 200 (444)
T 3soa_A 169 ------------------------------------------------AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACG 200 (444)
T ss_dssp ------------------------------------------------BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHH
T ss_pred ------------------------------------------------eeecccCCcccCCHHHhcCCCCCCccccHHHH
Confidence 00114789999999999998899999999999
Q ss_pred hhhhhccc---cCCCCchHHHHHHHhhcCC--CCcccc-ccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCC
Q 004998 299 VLLFELFC---PFSTGEEKTRTMSSLRHRV--LPPQLL-LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 366 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~--~p~~~~-~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~ 366 (720)
|++|+|++ ||...... .....+..+. ++.... ...+...+||.+||++||.+|||+.|+|+||||+.
T Consensus 201 vilyell~G~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~hp~~~~ 273 (444)
T 3soa_A 201 VILYILLVGYPPFWDEDQH-RLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHPWISH 273 (444)
T ss_dssp HHHHHHHHSSCSCCCSSHH-HHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSCTTHH
T ss_pred HHHHHHHhCCCCCCCccHH-HHHHHHHhCCCCCCccccccCCHHHHHHHHHHcCCChhHCCCHHHHhcCccccC
Confidence 99999999 66555443 3444444433 222222 33345559999999999999999999999999975
No 46
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=3.1e-35 Score=318.56 Aligned_cols=207 Identities=16% Similarity=0.148 Sum_probs=166.0
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..+|..+|.+++|||||++++ ++.... ..|+||||..++|.+++......+++.+++.++.||+.||.|||++||+
T Consensus 101 ~~~E~~~l~~l~hpniv~~~~-~~~~~~---~~~lv~e~~~g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iv 176 (348)
T 1u5q_A 101 IIKEVRFLQKLRHPNTIQYRG-CYLREH---TAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMI 176 (348)
T ss_dssp HHHHHHHHHHCCCTTBCCEEE-EEEETT---EEEEEEECCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCB
T ss_pred HHHHHHHHHhCCCCCEeeEEE-EEEECC---eEEEEEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 347888999999999999999 554443 6799999966899998855455699999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.+||+|||++......
T Consensus 177 H~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~------------------------------------------------- 207 (348)
T 1u5q_A 177 HRDVKAGNILLSEPGLVKLGDFGSASIMAPA------------------------------------------------- 207 (348)
T ss_dssp CCCCSGGGEEEETTTEEEECCCTTCBSSSSB-------------------------------------------------
T ss_pred eCCCCHHHEEECCCCCEEEeeccCceecCCC-------------------------------------------------
Confidence 9999999999999999999988877332100
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCcccc---CCCCCccccchhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA---GAPVSCASDIYRLGVL 300 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~---~~~~s~~sDIwSLGvl 300 (720)
....||+.|+|||++. +..++.++|||||||+
T Consensus 208 ---------------------------------------------~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~i 242 (348)
T 1u5q_A 208 ---------------------------------------------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT 242 (348)
T ss_dssp ---------------------------------------------CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHH
T ss_pred ---------------------------------------------CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHH
Confidence 0136899999999985 4558999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchH-HHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004998 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKE-ASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~-~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
+|||++ ||.......... .+.....+......++.. .+||.+||+.||.+|||+.++|+||||.....
T Consensus 243 l~ell~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h~~~~~~~~ 314 (348)
T 1u5q_A 243 CIELAERKPPLFNMNAMSALY-HIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERP 314 (348)
T ss_dssp HHHHHHSSCTTTTSCHHHHHH-HHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHHHHSCCC
T ss_pred HHHHHhCCCCCCCCChHHHHH-HHHhcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHhhChhhhccCC
Confidence 999999 666655443333 333333443333445544 49999999999999999999999999987643
No 47
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=2.8e-35 Score=322.87 Aligned_cols=206 Identities=16% Similarity=0.213 Sum_probs=162.9
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..+|..++|||||++++ ++.+.. .+|+|||| .|++|.+++.... .+++..++.|+.||+.||.|||++||
T Consensus 62 ~~~E~~il~~l~hp~Iv~l~~-~~~~~~---~~~lv~e~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH~~gi 136 (384)
T 4fr4_A 62 VFKELQIMQGLEHPFLVNLWY-SFQDEE---DMFMVVDLLLGGDLRYHLQQNV-HFKEETVKLFICELVMALDYLQNQRI 136 (384)
T ss_dssp HHHHHHHHHTCCCTTBCCEEE-EEECSS---EEEEEECCCTTEEHHHHHHTTC-CCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHhCCCCCCCcEEE-EEEeCC---EEEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 336888999999999999999 565543 57999999 8999999996543 49999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.+|++||+|||++.......
T Consensus 137 vHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~----------------------------------------------- 169 (384)
T 4fr4_A 137 IHRDMKPDNILLDEHGHVHITDFNIAAMLPRET----------------------------------------------- 169 (384)
T ss_dssp ECCCCSGGGEEECTTSCEEECCCTTCEECCTTC-----------------------------------------------
T ss_pred eeccCcHHHeEECCCCCEEEeccceeeeccCCC-----------------------------------------------
Confidence 999999999999999999999998874321110
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC---CCCCccccchhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG---APVSCASDIYRLGV 299 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~---~~~s~~sDIwSLGv 299 (720)
.....+||+.|+|||++.+ ..|+.++|||||||
T Consensus 170 --------------------------------------------~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~ 205 (384)
T 4fr4_A 170 --------------------------------------------QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGV 205 (384)
T ss_dssp --------------------------------------------CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHH
T ss_pred --------------------------------------------ceeccCCCccccCCeeeccCCCCCCCccceeechHH
Confidence 0011478999999999974 34899999999999
Q ss_pred hhhhccc---cCCCC--chHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCC-hHHHHcCcccCCC
Q 004998 300 LLFELFC---PFSTG--EEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPK-MGELLQSEFLNEP 367 (720)
Q Consensus 300 ll~eLlt---pf~~~--~~~~~~~~~l~~~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rpt-a~eiL~hp~~~~~ 367 (720)
++|||++ ||... .........+..... .++..+ +...+||.+||++||.+||+ +.++++||||...
T Consensus 206 il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~--~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~hp~f~~~ 278 (384)
T 4fr4_A 206 TAYELLRGRRPYHIRSSTSSKEIVHTFETTVV--TYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQNFPYMNDI 278 (384)
T ss_dssp HHHHHHHSSCSSCCCTTSCHHHHHHHHHHCCC--CCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHTSGGGTTC
T ss_pred HHHHHHhCCCCCCCCCCccHHHHHHHHhhccc--CCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHcChhhhcC
Confidence 9999999 67532 222233333332221 122233 44559999999999999998 8999999999986
No 48
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=5.5e-35 Score=304.78 Aligned_cols=207 Identities=18% Similarity=0.263 Sum_probs=157.4
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
+..+|..++..++||||+++++ ++.+.. .+++||||.+++|.+++.... .+++.+++.++.||+.||.|||++||
T Consensus 59 ~~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~i~~~l~~LH~~~i 133 (275)
T 2eue_A 59 RIEREISYLRLLRHPHIIKLYD-VIKSKD---EIIMVIEYAGNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCHRHKI 133 (275)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EEECSS---CEEEEEECCCEEHHHHHHTSS-SCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhCCCCCeEEEEE-EEecCC---eEEEEehhcCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCC
Confidence 4447888999999999999999 555443 579999998899999996544 49999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.+||+|||.+.......
T Consensus 134 ~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~----------------------------------------------- 166 (275)
T 2eue_A 134 VHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN----------------------------------------------- 166 (275)
T ss_dssp CCCCCSGGGEEECTTSCEEECCSSCC------------------------------------------------------
T ss_pred eeccCChHhEEECCCCCEEEeecccceeccCcc-----------------------------------------------
Confidence 999999999999999999999998873321110
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCC-Cccccchhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYRLGVLL 301 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~-s~~sDIwSLGvll 301 (720)
......||+.|+|||++.+..+ +.++|||||||++
T Consensus 167 --------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il 202 (275)
T 2eue_A 167 --------------------------------------------FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVIL 202 (275)
T ss_dssp ----------------------------------------------------CTTCCHHHHCC-----THHHHHHHHHHH
T ss_pred --------------------------------------------cccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHH
Confidence 0001368999999999988775 7899999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|||++ ||...... .....+.....+ ......+...+|+.+||++||.+|||+.|+|+||||+..
T Consensus 203 ~~l~~g~~pf~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h~~f~~~ 269 (275)
T 2eue_A 203 YVMLCRRLPFDDESIP-VLFKNISNGVYT-LPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKVD 269 (275)
T ss_dssp HHHHHSSCSSCCSSHH-HHHHHHHHTCCC-CCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTCHHHHTT
T ss_pred HHHHhCCCCCCCCCHH-HHHHHHHhCCCC-CCccCCHHHHHHHHHHhhcCHhHCCCHHHHhhCCeeccc
Confidence 99999 77665443 333334333221 111223455699999999999999999999999999875
No 49
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=5.5e-35 Score=321.10 Aligned_cols=211 Identities=18% Similarity=0.282 Sum_probs=167.7
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++|||||++++ ++.+.. .+|+|||| .|++|.+++......+++.+++.++.||+.||.|||++|
T Consensus 94 ~~~~E~~il~~l~hpnIv~~~~-~~~~~~---~~~lv~E~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~g 169 (387)
T 1kob_A 94 TVKNEISIMNQLHHPKLINLHD-AFEDKY---EMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHS 169 (387)
T ss_dssp HHHHHHHHHTTCCSTTBCCEEE-EEECSS---EEEEEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCcCCCeEEE-EEEeCC---EEEEEEEcCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3347888999999999999999 555543 68999999 899999999766656999999999999999999999999
Q ss_pred ceeccCCCCcEEEcc--CCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004998 142 IVVHNVRPSCFVMSS--FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 142 IvHrDLKP~NILl~~--~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
|+||||||+|||++. .+.+||+|||++.......
T Consensus 170 ivHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~-------------------------------------------- 205 (387)
T 1kob_A 170 IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE-------------------------------------------- 205 (387)
T ss_dssp EECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTS--------------------------------------------
T ss_pred eeecccchHHeEEecCCCCceEEEecccceecCCCc--------------------------------------------
Confidence 999999999999974 4679999888874321110
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhh
Q 004998 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
......||+.|+|||++.+..++.++|||||||
T Consensus 206 -----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~ 238 (387)
T 1kob_A 206 -----------------------------------------------IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGV 238 (387)
T ss_dssp -----------------------------------------------CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHH
T ss_pred -----------------------------------------------ceeeeccCCCccCchhccCCCCCCcccEeeHhH
Confidence 001136899999999999988999999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhcC--CCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004998 300 LLFELFC---PFSTGEEKTRTMSSLRHR--VLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~~--~~p~~~~~~~-p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
++|||++ ||...... .....+... .+++.....+ +...+||.+||+.||.+|||+.|+|+||||+....
T Consensus 239 il~elltg~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 313 (387)
T 1kob_A 239 LGYVLLSGLSPFAGEDDL-ETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGDHS 313 (387)
T ss_dssp HHHHHHHSCCSSCCSSHH-HHHHHHHHCCCCCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTSTTTSSCCT
T ss_pred HHHHHHhCCCCCCCCCHH-HHHHHHHhCCCCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCccccCCcc
Confidence 9999999 67665443 333333332 2233333333 44569999999999999999999999999987643
No 50
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=1e-35 Score=321.94 Aligned_cols=204 Identities=18% Similarity=0.255 Sum_probs=162.8
Q ss_pred ehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 66 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.|..+|..+ +||||+++++ ++.+.. .+|+|||| .|++|.+++.+.+ .+++.+++.++.||+.||.|||++||+
T Consensus 66 ~E~~il~~~~~hp~iv~l~~-~~~~~~---~~~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~iv 140 (345)
T 1xjd_A 66 VEKRVLSLAWEHPFLTHMFC-TFQTKE---NLFFVMEYLNGGDLMYHIQSCH-KFDLSRATFYAAEIILGLQFLHSKGIV 140 (345)
T ss_dssp HHHHHHHHHTTCTTBCCEEE-EEECSS---EEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTCB
T ss_pred HHHHHHHhcCCCCCCCcEEE-EEEeCC---EEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeE
Confidence 555667664 8999999999 565543 58999999 8999999995543 499999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.+|++||+|||+++...... .
T Consensus 141 HrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~----------------------------------~------------- 173 (345)
T 1xjd_A 141 YRDLKLDNILLDKDGHIKIADFGMCKENMLGD----------------------------------A------------- 173 (345)
T ss_dssp CCCCCGGGEEECTTSCEEECCCTTCBCCCCTT----------------------------------C-------------
T ss_pred eCCCChhhEEECCCCCEEEeEChhhhhcccCC----------------------------------C-------------
Confidence 99999999999999999999998874321000 0
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
.....+||+.|+|||++.+..++.++|||||||++||
T Consensus 174 -------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e 210 (345)
T 1xjd_A 174 -------------------------------------------KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYE 210 (345)
T ss_dssp -------------------------------------------CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHH
T ss_pred -------------------------------------------cccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHH
Confidence 0011478999999999999999999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChH-HHHcCcccCCC
Q 004998 304 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMG-ELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rpta~-eiL~hp~~~~~ 367 (720)
|++ ||...... ..+..+..... .++... +...+||.+||+.||.+||++. +|++||||+..
T Consensus 211 ll~g~~Pf~~~~~~-~~~~~i~~~~~--~~p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~~hp~f~~~ 276 (345)
T 1xjd_A 211 MLIGQSPFHGQDEE-ELFHSIRMDNP--FYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREI 276 (345)
T ss_dssp HHHSSCSSCCSSHH-HHHHHHHHCCC--CCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGGSGGGTTC
T ss_pred HhcCCCCCCCCCHH-HHHHHHHhCCC--CCCcccCHHHHHHHHHHhcCCHhHcCCChHHHHcCccccCC
Confidence 999 77665443 34444443321 122223 4445999999999999999998 99999999986
No 51
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=2e-34 Score=312.21 Aligned_cols=208 Identities=15% Similarity=0.165 Sum_probs=159.5
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
+|..+|.+++||||+++++ ++.... .+++|||| .|++|.+++... ..+++.+++.++.||+.||.|||++||+|
T Consensus 97 ~E~~~l~~l~h~niv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~L~~LH~~~ivH 171 (349)
T 2w4o_A 97 TEIGVLLRLSHPNIIKLKE-IFETPT---EISLVLELVTGGELFDRIVEK-GYYSERDAADAVKQILEAVAYLHENGIVH 171 (349)
T ss_dssp --CHHHHHCCCTTBCCEEE-EEECSS---EEEEEECCCCSCBHHHHHTTC-SSCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHhCCCCCCcceee-eEecCC---eEEEEEEeCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEe
Confidence 6777999999999999999 555443 57999999 899999999554 34999999999999999999999999999
Q ss_pred ccCCCCcEEEcc---CCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 145 HNVRPSCFVMSS---FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 145 rDLKP~NILl~~---~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|||||+|||++. ++.+||+|||++.......
T Consensus 172 ~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~---------------------------------------------- 205 (349)
T 2w4o_A 172 RDLKPENLLYATPAPDAPLKIADFGLSKIVEHQV---------------------------------------------- 205 (349)
T ss_dssp CCCCGGGEEESSSSTTCCEEECCCC-------------------------------------------------------
T ss_pred cCCCcccEEEecCCCCCCEEEccCccccccCccc----------------------------------------------
Confidence 999999999975 8899999888874321100
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......||+.|+|||++.+..++.++|||||||++
T Consensus 206 ---------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il 240 (349)
T 2w4o_A 206 ---------------------------------------------LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIIT 240 (349)
T ss_dssp ----------------------------------------------------CGGGSCHHHHTTCCCCTHHHHHHHHHHH
T ss_pred ---------------------------------------------ccccccCCCCccCHHHhcCCCCCcccchHHHHHHH
Confidence 00114689999999999998899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCC--CccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRHRVL--PPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~--p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
|||++ ||............+..... ++......+ ...+||.+||.+||.+|||+.|+|+||||.....
T Consensus 241 ~ell~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~~ 314 (349)
T 2w4o_A 241 YILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPWVTGKAA 314 (349)
T ss_dssp HHHHHSSCTTCCTTCHHHHHHHHHTTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTTSTTC
T ss_pred HHHHhCCCCCCCCcccHHHHHHHHhCCCccCCchhhhCCHHHHHHHHHHccCChhhCcCHHHHhcCcccCCCcc
Confidence 99999 67655544444444444322 222223334 4559999999999999999999999999997643
No 52
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=6.1e-35 Score=321.39 Aligned_cols=205 Identities=18% Similarity=0.276 Sum_probs=160.8
Q ss_pred ehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 66 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
+|..+|.++ +|||||++++ ++.+.. .+|+|||| .|++|.+++.+.. .+++..++.|+.||+.||.|||++|||
T Consensus 101 ~E~~il~~~~~hp~Iv~l~~-~~~~~~---~~~lV~E~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH~~giv 175 (396)
T 4dc2_A 101 TEKHVFEQASNHPFLVGLHS-CFQTES---RLFFVIEYVNGGDLMFHMQRQR-KLPEEHARFYSAEISLALNYLHERGII 175 (396)
T ss_dssp HHHHHHHHHTTCTTBCCEEE-EEECSS---EEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTCB
T ss_pred HHHHHHHhcCCCCCcCeeEE-EEEECC---EEEEEEEcCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCEE
Confidence 566677665 8999999999 665543 68999999 8999999995543 499999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.+|++||+|||+++...... +
T Consensus 176 HrDLKp~NILl~~~g~ikL~DFGla~~~~~~~---------------------------------~-------------- 208 (396)
T 4dc2_A 176 YRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG---------------------------------D-------------- 208 (396)
T ss_dssp CCCCCGGGEEECTTSCEEECCCTTCBCCCCTT---------------------------------C--------------
T ss_pred eccCCHHHEEECCCCCEEEeecceeeecccCC---------------------------------C--------------
Confidence 99999999999999999999999874311100 0
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
.....+||+.|+|||++.+..|+.++|||||||++||
T Consensus 209 -------------------------------------------~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllye 245 (396)
T 4dc2_A 209 -------------------------------------------TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFE 245 (396)
T ss_dssp -------------------------------------------CBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHH
T ss_pred -------------------------------------------ccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHH
Confidence 0012579999999999999999999999999999999
Q ss_pred ccc---cCCCCc--------hHHHHHHHhhcCCCCccccc-cCchHHHHHHHcCCCCCCCCCCh------HHHHcCcccC
Q 004998 304 LFC---PFSTGE--------EKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPKM------GELLQSEFLN 365 (720)
Q Consensus 304 Llt---pf~~~~--------~~~~~~~~l~~~~~p~~~~~-~~p~~~~li~~~L~~dP~~Rpta------~eiL~hp~~~ 365 (720)
|++ ||.... ........+....+ .++. ..+...+||.+||++||.+||++ .||++||||+
T Consensus 246 ll~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~--~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~Hpff~ 323 (396)
T 4dc2_A 246 MMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI--RIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFR 323 (396)
T ss_dssp HHHSSCSSTTTTC------CCHHHHHHHHHHCCC--CCCTTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHSTTTT
T ss_pred HHhCCCCCcccccccccchhhHHHHHHHHhcccc--CCCCcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcCcccc
Confidence 999 664221 11223333333221 1222 23445699999999999999985 7999999999
Q ss_pred CC
Q 004998 366 EP 367 (720)
Q Consensus 366 ~~ 367 (720)
..
T Consensus 324 ~i 325 (396)
T 4dc2_A 324 NV 325 (396)
T ss_dssp TC
T ss_pred CC
Confidence 86
No 53
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=2.7e-35 Score=325.77 Aligned_cols=206 Identities=16% Similarity=0.195 Sum_probs=163.6
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
+|..++..++|||||++++ ++.+.. .+|+|||| .|++|.+++.+. .+++..++.++.||+.||.|||++||||
T Consensus 118 ~E~~il~~l~hp~Iv~l~~-~~~~~~---~~~lV~E~~~gg~L~~~l~~~--~~~e~~~~~~~~qi~~aL~~LH~~givH 191 (410)
T 3v8s_A 118 EERDIMAFANSPWVVQLFY-AFQDDR---YLYMVMEYMPGGDLVNLMSNY--DVPEKWARFYTAEVVLALDAIHSMGFIH 191 (410)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EEECSS---EEEEEECCCTTEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhCCCCCCCeEEE-EEEECC---EEEEEEeCCCCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEe
Confidence 5667899999999999999 565543 68999999 799999999653 3999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+|||++.+|++||+|||++.........
T Consensus 192 rDLKp~NILl~~~g~ikL~DFG~a~~~~~~~~~----------------------------------------------- 224 (410)
T 3v8s_A 192 RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMV----------------------------------------------- 224 (410)
T ss_dssp CCCSGGGEEECTTSCEEECCCTTCEECCTTSEE-----------------------------------------------
T ss_pred ccCCHHHeeECCCCCEEEeccceeEeeccCCcc-----------------------------------------------
Confidence 999999999999999999999888432211000
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC----CCccccchhhhhh
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP----VSCASDIYRLGVL 300 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~----~s~~sDIwSLGvl 300 (720)
.....+||+.|+|||++.+.. |+.++|||||||+
T Consensus 225 ------------------------------------------~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvi 262 (410)
T 3v8s_A 225 ------------------------------------------RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVF 262 (410)
T ss_dssp ------------------------------------------ECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHH
T ss_pred ------------------------------------------cccCCcCCccccCHHHhhccCCCcCCCCcceEecchHH
Confidence 001247999999999998765 8899999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcC---CCCccccccCchHHHHHHHcCCCCCCC--CCChHHHHcCcccCCC
Q 004998 301 LFELFC---PFSTGEEKTRTMSSLRHR---VLPPQLLLKFPKEASFCLWLLHPEPSG--RPKMGELLQSEFLNEP 367 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~---~~p~~~~~~~p~~~~li~~~L~~dP~~--Rpta~eiL~hp~~~~~ 367 (720)
+|||++ ||...... .....+... ...|......+...+||.+||..+|.+ ||+++||++||||+..
T Consensus 263 lyell~G~~Pf~~~~~~-~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~Hp~f~~~ 336 (410)
T 3v8s_A 263 LYEMLVGDTPFYADSLV-GTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKND 336 (410)
T ss_dssp HHHHHHSSCTTCCSSHH-HHHHHHHTHHHHCCCCTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTSGGGCCS
T ss_pred HHHHHhCCCCCCCCChh-hHHHHHHhccccccCCCcccccHHHHHHHHHHccChhhhCCCCCHHHHhcCccccCC
Confidence 999999 77665544 333333321 112222223345569999999999988 9999999999999986
No 54
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=8.6e-35 Score=307.11 Aligned_cols=207 Identities=14% Similarity=0.169 Sum_probs=161.1
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..+|.+++||||+++++ ++.+.. ...+|+|||| .+++|.+++.. ..+++.+++.++.||+.||.|||++||+
T Consensus 84 ~~E~~~l~~l~h~~iv~~~~-~~~~~~-~~~~~lv~e~~~~~~l~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~iv 159 (298)
T 2zv2_A 84 YQEIAILKKLDHPNVVKLVE-VLDDPN-EDHLYMVFELVNQGPVMEVPTL--KPLSEDQARFYFQDLIKGIEYLHYQKII 159 (298)
T ss_dssp HHHHHHHHTCCCTTBCCEEE-EEECSS-SSEEEEEEECCTTCBSCCSSCS--SCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHhCCCCCCCeEEE-EEEcCC-CCEEEEEEecCCCCcHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 47888999999999999999 554422 2368999999 88999886633 3599999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.+||+|||++........
T Consensus 160 H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~----------------------------------------------- 192 (298)
T 2zv2_A 160 HRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDA----------------------------------------------- 192 (298)
T ss_dssp CCCCCGGGEEECTTSCEEECCCTTCEECSSSSC-----------------------------------------------
T ss_pred ccCCCHHHEEECCCCCEEEecCCCccccccccc-----------------------------------------------
Confidence 999999999999999999999988743211100
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC---CCccccchhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP---VSCASDIYRLGVL 300 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~---~s~~sDIwSLGvl 300 (720)
......||+.|+|||++.+.. ++.++|||||||+
T Consensus 193 -------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~ 229 (298)
T 2zv2_A 193 -------------------------------------------LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVT 229 (298)
T ss_dssp -------------------------------------------EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHH
T ss_pred -------------------------------------------cccCCcCCccccChhhhccCCCCCCCchhhhHhHHHH
Confidence 001146899999999998765 4788999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCcc-ccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCC
Q 004998 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQ-LLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 366 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p~~-~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~ 366 (720)
+|||++ ||...... .....+.....+.. .....+...+||.+||++||.+|||+.|+|+||||+.
T Consensus 230 l~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~hp~~~~ 298 (298)
T 2zv2_A 230 LYCFVFGQCPFMDERIM-CLHSKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWVTR 298 (298)
T ss_dssp HHHHHHSSCSSCCSSHH-HHHHHHHHCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTCHHHHC
T ss_pred HHHHHHCCCCCCCccHH-HHHHHHhcccCCCCCccccCHHHHHHHHHHhhcChhhCCCHHHHhcCccccC
Confidence 999999 67655433 33333433333222 2223344569999999999999999999999999863
No 55
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=3.5e-35 Score=314.66 Aligned_cols=210 Identities=13% Similarity=0.153 Sum_probs=164.9
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..++..++||||+++++ ++.++. ..|+|||| .|++|.+++... ..+++.+++.++.||+.||.|||++||+
T Consensus 53 ~~E~~~l~~l~hpnIv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~LH~~giv 127 (323)
T 3tki_A 53 KKEICINKMLNHENVVKFYG-HRREGN---IQYLFLEYCSGGELFDRIEPD-IGMPEPDAQRFFHQLMAGVVYLHGIGIT 127 (323)
T ss_dssp HHHHHHHHHCCCTTBCCEEE-EEECSS---EEEEEEECCTTEEGGGGSBTT-TBCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHhCCCCCCCeEEE-EEecCC---eEEEEEEcCCCCcHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 36778999999999999999 555543 67999999 789999999544 3499999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.+||+|||++.........
T Consensus 128 H~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~---------------------------------------------- 161 (323)
T 3tki_A 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRE---------------------------------------------- 161 (323)
T ss_dssp CSCCSGGGEEECTTCCEEECCCTTCEECEETTEE----------------------------------------------
T ss_pred ccccchHHEEEeCCCCEEEEEeeccceeccCCcc----------------------------------------------
Confidence 9999999999999999999999887432111000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCC-Cccccchhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYRLGVLLF 302 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~-s~~sDIwSLGvll~ 302 (720)
.......||+.|+|||++.+..+ +.++|||||||++|
T Consensus 162 ------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ 199 (323)
T 3tki_A 162 ------------------------------------------RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLT 199 (323)
T ss_dssp ------------------------------------------CCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHH
T ss_pred ------------------------------------------cccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHH
Confidence 00011478999999999988775 78999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcC-CCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 303 ELFC---PFSTGEEKTRTMSSLRHR-VLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~-~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
+|++ ||............+... ...+......+...+||.+||++||.+|||+.|+++||||+..
T Consensus 200 ~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~~ 268 (323)
T 3tki_A 200 AMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKP 268 (323)
T ss_dssp HHHHSSCSCSSSCTTSHHHHHHHTTCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCC
T ss_pred HHHhCCCCCCCCchHHHHHHHHhcccccCCccccCCHHHHHHHHHHccCChhhCcCHHHHhhChhhccc
Confidence 9999 676544432333333322 2222233344455699999999999999999999999999875
No 56
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=1.4e-34 Score=313.68 Aligned_cols=208 Identities=19% Similarity=0.249 Sum_probs=163.6
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC---CCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~---~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
..+|..++..++|||||++++ ++.+.. .+|+|||| .|++|.+++.+ .+..+++..++.++.||+.||.|||+
T Consensus 73 ~~~E~~~l~~l~hpnIv~~~~-~~~~~~---~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~ 148 (351)
T 3c0i_A 73 LKREASICHMLKHPHIVELLE-TYSSDG---MLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHD 148 (351)
T ss_dssp HHHHHHHHHHCCCTTBCCEEE-EEEETT---EEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCCcEEE-EEEeCC---EEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 347788999999999999999 555543 68999999 88999988832 33458999999999999999999999
Q ss_pred cCceeccCCCCcEEEccCCc---eEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCC
Q 004998 140 QGIVVHNVRPSCFVMSSFNH---VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 216 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~---vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~ 216 (720)
+||+||||||+|||++.++. +||+|||++...+....
T Consensus 149 ~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~~~~~~---------------------------------------- 188 (351)
T 3c0i_A 149 NNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGL---------------------------------------- 188 (351)
T ss_dssp TTEECSCCSGGGEEECSSSTTCCEEECCCTTCEECCTTSC----------------------------------------
T ss_pred CCceeccCChHHeEEecCCCCCcEEEecCcceeEecCCCe----------------------------------------
Confidence 99999999999999986654 99998888743321100
Q ss_pred CCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchh
Q 004998 217 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYR 296 (720)
Q Consensus 217 ~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwS 296 (720)
.....+||+.|+|||++.+..++.++||||
T Consensus 189 --------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Diws 218 (351)
T 3c0i_A 189 --------------------------------------------------VAGGRVGTPHFMAPEVVKREPYGKPVDVWG 218 (351)
T ss_dssp --------------------------------------------------BCCCCCSCGGGCCHHHHTTCCBCTHHHHHH
T ss_pred --------------------------------------------------eecCCcCCcCccCHHHHcCCCCCchHhhHH
Confidence 001147899999999999988999999999
Q ss_pred hhhhhhhccc---cCCCCchHHHHHHHhhcCC--CCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 297 LGVLLFELFC---PFSTGEEKTRTMSSLRHRV--LPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 297 LGvll~eLlt---pf~~~~~~~~~~~~l~~~~--~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|||++|+|++ ||..... .....+..+. .++......+ ...+||.+||++||.+|||+.|+|+||||+..
T Consensus 219 lG~il~~ll~g~~pf~~~~~--~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~~ 293 (351)
T 3c0i_A 219 CGVILFILLSGCLPFYGTKE--RLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLKER 293 (351)
T ss_dssp HHHHHHHHHHSSCSSCSSHH--HHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTH
T ss_pred HHHHHHHHHHCCCCCCCcHH--HHHHHHHcCCCCCCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcChhhcCC
Confidence 9999999999 6665432 3334443333 2333333344 44599999999999999999999999999863
No 57
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=2.3e-34 Score=325.31 Aligned_cols=207 Identities=19% Similarity=0.221 Sum_probs=165.0
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++|||||++++ ++.+.. .+|+|||| .|++|.+++.... .+++.+++.++.||+.||.|||++|
T Consensus 72 ~~~~E~~~l~~l~hpniv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~ 146 (484)
T 3nyv_A 72 SLLREVQLLKQLDHPNIMKLYE-FFEDKG---YFYLVGEVYTGGELFDEIISRK-RFSEVDAARIIRQVLSGITYMHKNK 146 (484)
T ss_dssp HHHHHHHHHTTCCCTTBCCEEE-EEECSS---EEEEEECCCCSCBHHHHHHTCS-CCBHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCCCcEEE-EEEeCC---EEEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3447888999999999999999 565543 68999999 8999999996544 4999999999999999999999999
Q ss_pred ceeccCCCCcEEE---ccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCC
Q 004998 142 IVVHNVRPSCFVM---SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 142 IvHrDLKP~NILl---~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
|+||||||+|||+ +.++.+||+|||++.......
T Consensus 147 ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~------------------------------------------- 183 (484)
T 3nyv_A 147 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK------------------------------------------- 183 (484)
T ss_dssp CCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCCCC-------------------------------------------
T ss_pred eeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccccc-------------------------------------------
Confidence 9999999999999 467889999888773321110
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhh
Q 004998 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
.....+||+.|+|||++.+ .|+.++||||||
T Consensus 184 ------------------------------------------------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG 214 (484)
T 3nyv_A 184 ------------------------------------------------KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTG 214 (484)
T ss_dssp ------------------------------------------------SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHH
T ss_pred ------------------------------------------------ccccCCCCccccCceeecC-CCCCcceeHHHH
Confidence 0011468999999999987 599999999999
Q ss_pred hhhhhccc---cCCCCchHHHHHHHhhcCCCC---ccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 299 VLLFELFC---PFSTGEEKTRTMSSLRHRVLP---PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~~p---~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|++|+|++ ||...... .....+..+.++ +.+....+...+||.+||++||.+|||+.|+|+||||+..
T Consensus 215 ~il~~ll~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h~~~~~~ 288 (484)
T 3nyv_A 215 VILYILLSGCPPFNGANEY-DILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTY 288 (484)
T ss_dssp HHHHHHHHSSCSSCCSSHH-HHHHHHHHCCCCCCSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHHH
T ss_pred HHHHHHHHCCCCCCCCCHH-HHHHHHHcCCCCCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhhChhhccc
Confidence 99999999 77665544 344444444332 2222333445699999999999999999999999999864
No 58
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=6.2e-35 Score=320.48 Aligned_cols=218 Identities=16% Similarity=0.113 Sum_probs=161.7
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+..+|..+|.+++|||||++++ ++.+.. .+|+|||| .+++|.+++... ...+++..++.|+.||+.||.|||++
T Consensus 72 ~~~~E~~~l~~l~h~niv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~ 147 (389)
T 3gni_B 72 FLQGELHVSKLFNHPNIVPYRA-TFIADN---ELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHM 147 (389)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EEEETT---EEEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhCCCCCCCcEeE-EEEECC---EEEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 3346888999999999999999 555443 68999999 899999999443 34599999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004998 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+|||++.++.+||+|||.+.... +.|.....
T Consensus 148 ~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~------------------------------------~~~~~~~~---- 187 (389)
T 3gni_B 148 GYVHRSVKASHILISVDGKVYLSGLRSNLSMI------------------------------------SHGQRQRV---- 187 (389)
T ss_dssp TEECCCCSGGGEEECTTCCEEECCGGGCEECE------------------------------------ETTEECSC----
T ss_pred CeecCCCCHHHEEEcCCCCEEEcccccceeec------------------------------------cccccccc----
Confidence 99999999999999999999999998873221 11000000
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC--CCCCccccchhhh
Q 004998 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG--APVSCASDIYRLG 298 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~--~~~s~~sDIwSLG 298 (720)
........+||+.|+|||++.+ ..++.++||||||
T Consensus 188 -------------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG 224 (389)
T 3gni_B 188 -------------------------------------------VHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVG 224 (389)
T ss_dssp -------------------------------------------BCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHH
T ss_pred -------------------------------------------cccccccccccccccCHHHHhccCCCCCcHhHHHHHH
Confidence 0000011478999999999988 4699999999999
Q ss_pred hhhhhccc---cCCCCchHHHHHHHhhcCCCC--------------------------------------------cccc
Q 004998 299 VLLFELFC---PFSTGEEKTRTMSSLRHRVLP--------------------------------------------PQLL 331 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~~p--------------------------------------------~~~~ 331 (720)
|++|||++ ||............+.. ..+ ....
T Consensus 225 ~il~el~~g~~pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (389)
T 3gni_B 225 ITACELANGHVPFKDMPATQMLLEKLNG-TVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYH 303 (389)
T ss_dssp HHHHHHHHSSCTTTTCCSTTHHHHC-------------------------------------------------------
T ss_pred HHHHHHHHCCCCCCCCCHHHHHHHHhcC-CCCccccccccccccccccccccccccccccccccCccccccCCCCCCccc
Confidence 99999999 67654333222222211 100 0011
Q ss_pred c-cCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004998 332 L-KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 332 ~-~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
. ..+...+||.+||++||.+|||+.|+|+||||+...
T Consensus 304 ~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~f~~~~ 341 (389)
T 3gni_B 304 RTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIK 341 (389)
T ss_dssp --CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGGGC-
T ss_pred cccCHHHHHHHHHHhhcCcccCCCHHHHhcCHHHHHHh
Confidence 1 223445999999999999999999999999998764
No 59
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=5.2e-35 Score=319.71 Aligned_cols=200 Identities=18% Similarity=0.219 Sum_probs=160.3
Q ss_pred hcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCC
Q 004998 70 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 148 (720)
Q Consensus 70 ~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLK 148 (720)
++..++|||||++++ ++.+.. .+|+|||| .|++|.+++.+.. .+++..++.++.||+.||.|||++||+|||||
T Consensus 92 ll~~~~hp~Iv~l~~-~~~~~~---~~~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~givHrDlk 166 (373)
T 2r5t_A 92 LLKNVKHPFLVGLHF-SFQTAD---KLYFVLDYINGGELFYHLQRER-CFLEPRARFYAAEIASALGYLHSLNIVYRDLK 166 (373)
T ss_dssp CBCCCCCTTBCCEEE-EEECSS---EEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCC
T ss_pred HHHhCCCCCCCCEEE-EEEeCC---EEEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCceecCCC
Confidence 367799999999999 555543 68999999 8999999995543 49999999999999999999999999999999
Q ss_pred CCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccC
Q 004998 149 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 228 (720)
Q Consensus 149 P~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~ 228 (720)
|+|||++.+|++||+|||+++......
T Consensus 167 p~NIll~~~g~ikL~DFG~a~~~~~~~----------------------------------------------------- 193 (373)
T 2r5t_A 167 PENILLDSQGHIVLTDFGLCKENIEHN----------------------------------------------------- 193 (373)
T ss_dssp GGGEEECTTSCEEECCCCBCGGGBCCC-----------------------------------------------------
T ss_pred HHHEEECCCCCEEEeeCccccccccCC-----------------------------------------------------
Confidence 999999999999999998874210000
Q ss_pred CCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhccc--
Q 004998 229 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 306 (720)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt-- 306 (720)
......+||+.|+|||++.+..++.++|||||||++|||++
T Consensus 194 -------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~ 236 (373)
T 2r5t_A 194 -------------------------------------STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGL 236 (373)
T ss_dssp -------------------------------------CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSS
T ss_pred -------------------------------------CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCC
Confidence 00012578999999999999999999999999999999999
Q ss_pred -cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCCh----HHHHcCcccCCC
Q 004998 307 -PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKM----GELLQSEFLNEP 367 (720)
Q Consensus 307 -pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rpta----~eiL~hp~~~~~ 367 (720)
||...... ..+..+....+ .+...+ +...+||.+||+.||.+||++ .++++||||+..
T Consensus 237 ~Pf~~~~~~-~~~~~i~~~~~--~~~~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~i~~h~~f~~~ 300 (373)
T 2r5t_A 237 PPFYSRNTA-EMYDNILNKPL--QLKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSHVFFSLI 300 (373)
T ss_dssp CTTCCSBHH-HHHHHHHHSCC--CCCSSSCHHHHHHHHHHTCSSGGGSTTTTTTHHHHHTSGGGTTC
T ss_pred CCCCCCCHH-HHHHHHHhccc--CCCCCCCHHHHHHHHHHcccCHHhCCCCCCCHHHHhCCccccCC
Confidence 77665544 34444443322 122233 344599999999999999986 699999999986
No 60
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=3.2e-35 Score=320.74 Aligned_cols=214 Identities=16% Similarity=0.209 Sum_probs=156.0
Q ss_pred eeeehhhhcccCCCCCceecccceeecC---CCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENE---AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~---~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
+..+|..+|.+++||||+++++ ++... .....+|++||+.+++|.+++.. ..+++..++.++.||+.||.|||+
T Consensus 74 ~~~~E~~~l~~l~hpnIv~~~~-~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~ 150 (367)
T 2fst_X 74 RTYRELRLLKHMKHENVIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHS 150 (367)
T ss_dssp HHHHHHHHHHHCCCTTBCCCSE-EECSCSSGGGCCCCEEEEECCCEECC-------CCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCCcEEE-EEecCCccccCCeEEEEecccCCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH
Confidence 4447888999999999999999 54332 12245799999999999998854 349999999999999999999999
Q ss_pred cCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004998 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||+||||||+|||++.++.+||+|||+++..+..
T Consensus 151 ~givH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~--------------------------------------------- 185 (367)
T 2fst_X 151 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE--------------------------------------------- 185 (367)
T ss_dssp TTCCCCCCCGGGEEECTTCCEEECC-------------------------------------------------------
T ss_pred CCeeeCCCCHhhEEECCCCCEEEeecccccccccc---------------------------------------------
Confidence 99999999999999999999999988887332100
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-CCCCccccchhhh
Q 004998 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLG 298 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sDIwSLG 298 (720)
....+||++|+|||++.+ ..++.++||||||
T Consensus 186 ------------------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG 217 (367)
T 2fst_X 186 ------------------------------------------------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVG 217 (367)
T ss_dssp -----------------------------------------------------CCCTTCCHHHHTTCCSCCTTHHHHHHH
T ss_pred ------------------------------------------------CCCcCcCcCccChHHHcCCcCCCchhhHHHHH
Confidence 011478999999999987 5689999999999
Q ss_pred hhhhhccc---cCCCCchHHHHHHHhhc-CCC-----------------------Cc-----cccccCchHHHHHHHcCC
Q 004998 299 VLLFELFC---PFSTGEEKTRTMSSLRH-RVL-----------------------PP-----QLLLKFPKEASFCLWLLH 346 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~-~~~-----------------------p~-----~~~~~~p~~~~li~~~L~ 346 (720)
|++|||++ ||.+..........+.. +.. +. .+....+...+||.+||.
T Consensus 218 ~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~ 297 (367)
T 2fst_X 218 CIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 297 (367)
T ss_dssp HHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSC
T ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCC
Confidence 99999999 67665443222221110 000 00 011223445699999999
Q ss_pred CCCCCCCChHHHHcCcccCCCccchH
Q 004998 347 PEPSGRPKMGELLQSEFLNEPRDSME 372 (720)
Q Consensus 347 ~dP~~Rpta~eiL~hp~~~~~~~~l~ 372 (720)
+||.+|||+.|+|+||||.....+..
T Consensus 298 ~dP~~R~t~~e~L~hp~~~~~~~~~~ 323 (367)
T 2fst_X 298 LDSDKRITAAQALAHAYFAQYHDPDD 323 (367)
T ss_dssp SSGGGSCCHHHHHTSGGGTTTCCGGG
T ss_pred CCcccCcCHHHHhcChhhhhccCCCC
Confidence 99999999999999999998765443
No 61
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=5e-35 Score=315.84 Aligned_cols=213 Identities=18% Similarity=0.269 Sum_probs=162.2
Q ss_pred eeehhhhcccCCC--CCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 64 KHSDGVELTHGDH--LRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 64 ~~~e~~~Ls~l~H--pnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
..+|..+|.++.| |||+++++ ++..+. .+|+|||+.+++|.+++.... .+++.+++.|+.||+.||.|||++|
T Consensus 54 ~~~E~~~l~~l~~~~~~iv~~~~-~~~~~~---~~~lv~e~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~al~~lH~~~ 128 (343)
T 3dbq_A 54 YRNEIAYLNKLQQHSDKIIRLYD-YEITDQ---YIYMVMECGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQHG 128 (343)
T ss_dssp HHHHHHHHHHHTTTCTTBCCEEE-EEECSS---EEEEEECCCSEEHHHHHHHSC-CCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhhhhcCCceEEEee-eEeeCC---EEEEEEeCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3467888988877 99999999 555443 689999999999999996543 4999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++ ++.+||+|||++.........
T Consensus 129 iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~~-------------------------------------------- 163 (343)
T 3dbq_A 129 IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTS-------------------------------------------- 163 (343)
T ss_dssp CCCCCCCGGGEEEE-TTEEEECCCSSSCCC--------------------------------------------------
T ss_pred eecCCCCcceEEEE-CCcEEEeecccccccCccccc--------------------------------------------
Confidence 99999999999996 688999999888443211000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-----------CCCCc
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-----------APVSC 290 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-----------~~~s~ 290 (720)
......+||+.|+|||++.+ ..++.
T Consensus 164 --------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~ 199 (343)
T 3dbq_A 164 --------------------------------------------VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISP 199 (343)
T ss_dssp --------------------------------------------------CCCCSSCCHHHHHHCC-----------CCH
T ss_pred --------------------------------------------ccCCCCcCCcCcCCHHHHhhccccccccccccCCCc
Confidence 00011478999999999864 55899
Q ss_pred cccchhhhhhhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCC
Q 004998 291 ASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNE 366 (720)
Q Consensus 291 ~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~ 366 (720)
++|||||||++|||++ ||............+........++...+ ...+|+.+||++||.+|||+.|+|+||||+.
T Consensus 200 ~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~~~~ 279 (343)
T 3dbq_A 200 KSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQI 279 (343)
T ss_dssp HHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHS
T ss_pred hhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHhcCCcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhCccccc
Confidence 9999999999999999 67654443333434433333333333444 4559999999999999999999999999987
Q ss_pred Cccc
Q 004998 367 PRDS 370 (720)
Q Consensus 367 ~~~~ 370 (720)
...+
T Consensus 280 ~~~~ 283 (343)
T 3dbq_A 280 QTHP 283 (343)
T ss_dssp CCC-
T ss_pred cCCc
Confidence 6443
No 62
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=1.2e-34 Score=313.47 Aligned_cols=206 Identities=18% Similarity=0.279 Sum_probs=161.1
Q ss_pred eehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 65 HSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 65 ~~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
.+|..+|.++ +|||||++++ ++.+.. .+|+|||| .|++|.+++.+.. .+++..++.++.||+.||.|||++||
T Consensus 57 ~~E~~~l~~~~~hp~iv~l~~-~~~~~~---~~~lv~e~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH~~~i 131 (345)
T 3a8x_A 57 QTEKHVFEQASNHPFLVGLHS-CFQTES---RLFFVIEYVNGGDLMFHMQRQR-KLPEEHARFYSAEISLALNYLHERGI 131 (345)
T ss_dssp HHHHHHHHHTTTCTTBCCEEE-EEECSS---EEEEEECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhcCCCCccCeEEE-EEEeCC---EEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 3667778776 8999999999 555543 68999999 8999999995543 49999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++++||+|||+++...... +
T Consensus 132 vHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~---------------------------------~------------- 165 (345)
T 3a8x_A 132 IYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG---------------------------------D------------- 165 (345)
T ss_dssp BCCCCCGGGEEECTTSCEEECCGGGCBCSCCTT---------------------------------C-------------
T ss_pred eecCCCHHHEEECCCCCEEEEeccccccccCCC---------------------------------C-------------
Confidence 999999999999999999999988874311100 0
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
.....+||+.|+|||++.+..++.++|||||||++|
T Consensus 166 --------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ 201 (345)
T 3a8x_A 166 --------------------------------------------TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMF 201 (345)
T ss_dssp --------------------------------------------CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHH
T ss_pred --------------------------------------------cccccCCCccccCccccCCCCCChHHhHHHHHHHHH
Confidence 001147899999999999989999999999999999
Q ss_pred hccc---cCCCC--------chHHHHHHHhhcCCCCcccccc-CchHHHHHHHcCCCCCCCCCCh------HHHHcCccc
Q 004998 303 ELFC---PFSTG--------EEKTRTMSSLRHRVLPPQLLLK-FPKEASFCLWLLHPEPSGRPKM------GELLQSEFL 364 (720)
Q Consensus 303 eLlt---pf~~~--------~~~~~~~~~l~~~~~p~~~~~~-~p~~~~li~~~L~~dP~~Rpta------~eiL~hp~~ 364 (720)
||++ ||... .........+....+. ++.. .+...+||.+||+.||.+||++ .|+++||||
T Consensus 202 ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~~--~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~hp~f 279 (345)
T 3a8x_A 202 EMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR--IPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFF 279 (345)
T ss_dssp HHHHSSCTTTTTTC-------CHHHHHHHHHHCCCC--CCTTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTSGGG
T ss_pred HHHhCCCCcCCcccccccccccHHHHHHHHHcCCCC--CCCCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcCCcc
Confidence 9999 66431 1122233333332211 2222 3445699999999999999986 799999999
Q ss_pred CCC
Q 004998 365 NEP 367 (720)
Q Consensus 365 ~~~ 367 (720)
+..
T Consensus 280 ~~~ 282 (345)
T 3a8x_A 280 RNV 282 (345)
T ss_dssp TTC
T ss_pred CCC
Confidence 875
No 63
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=4.8e-35 Score=324.00 Aligned_cols=207 Identities=21% Similarity=0.307 Sum_probs=161.6
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
+|..+|..++||||+++++ ++.+.. .+|+|||| .|++|.++|.+.+..+++..++.|+.||+.||.|||++||||
T Consensus 110 ~E~~il~~~~hp~Iv~l~~-~~~~~~---~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~giiH 185 (412)
T 2vd5_A 110 EERDVLVNGDRRWITQLHF-AFQDEN---YLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVH 185 (412)
T ss_dssp HHHHHHHHSCTTTBCCEEE-EEECSS---EEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhcCCCCeeeEEE-EEeeCC---EEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeee
Confidence 5666888999999999999 665553 68999999 799999999665556999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+|||++.++++||+|||++........
T Consensus 186 rDLKp~NILld~~g~vkL~DFGla~~~~~~~~------------------------------------------------ 217 (412)
T 2vd5_A 186 RDIKPDNILLDRCGHIRLADFGSCLKLRADGT------------------------------------------------ 217 (412)
T ss_dssp CCCSGGGEEECTTSCEEECCCTTCEECCTTSC------------------------------------------------
T ss_pred cccCHHHeeecCCCCEEEeechhheeccCCCc------------------------------------------------
Confidence 99999999999999999999988743211100
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCcccc-------CCCCCccccchhh
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-------GAPVSCASDIYRL 297 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~-------~~~~s~~sDIwSL 297 (720)
......+||+.|+|||++. +..|+.++|||||
T Consensus 218 -----------------------------------------~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSl 256 (412)
T 2vd5_A 218 -----------------------------------------VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWAL 256 (412)
T ss_dssp -----------------------------------------EECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHH
T ss_pred -----------------------------------------cccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHH
Confidence 0001147899999999997 3458999999999
Q ss_pred hhhhhhccc---cCCCCchHHHHHHHhhc---CCCCccccccCc-hHHHHHHHcCCCCCCCC---CChHHHHcCcccCCC
Q 004998 298 GVLLFELFC---PFSTGEEKTRTMSSLRH---RVLPPQLLLKFP-KEASFCLWLLHPEPSGR---PKMGELLQSEFLNEP 367 (720)
Q Consensus 298 Gvll~eLlt---pf~~~~~~~~~~~~l~~---~~~p~~~~~~~p-~~~~li~~~L~~dP~~R---pta~eiL~hp~~~~~ 367 (720)
||++|||++ ||...... ..+..+.+ ....|.....++ ...+||.+||. +|.+| |+++||++||||+..
T Consensus 257 GvilyelltG~~Pf~~~~~~-~~~~~i~~~~~~~~~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~Hpff~~i 334 (412)
T 2vd5_A 257 GVFAYEMFYGQTPFYADSTA-ETYGKIVHYKEHLSLPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTHPFFFGL 334 (412)
T ss_dssp HHHHHHHHHSSCTTCCSSHH-HHHHHHHTHHHHCCCC----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTSGGGTTC
T ss_pred hHHHHHHHhCCCCCCCCCHH-HHHHHHHhcccCcCCCccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcCCCcCCC
Confidence 999999999 77665544 33333322 111222223344 44599999999 99998 599999999999976
No 64
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=2.4e-34 Score=308.05 Aligned_cols=213 Identities=15% Similarity=0.179 Sum_probs=162.6
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
+..+|..+|.+++||||+++++ ++.... .+++||||.+++|.+++...+..+++..++.++.||+.||.|||++||
T Consensus 46 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i 121 (324)
T 3mtl_A 46 TAIREVSLLKDLKHANIVTLHD-IIHTEK---SLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKV 121 (324)
T ss_dssp CCCCCHHHHSCCCCTTBCCEEE-EEECSS---CEEEEEECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred hHHHHHHHHHhcCCCCCCeeee-EEeeCC---EEEEEecccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 3346888999999999999999 555443 579999997789999997666679999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.+||+|||.+...+....
T Consensus 122 vH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~---------------------------------------------- 155 (324)
T 3mtl_A 122 LHRDLKPQNLLINERGELKLADFGLARAKSIPTK---------------------------------------------- 155 (324)
T ss_dssp EESSCCGGGEEECTTCCEEECSSSEEECC---------------------------------------------------
T ss_pred cCCCcCHHHEEECCCCCEEEccCcccccccCCcc----------------------------------------------
Confidence 9999999999999999999999988743211100
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-CCCCccccchhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLL 301 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sDIwSLGvll 301 (720)
......||++|+|||++.+ ..++.++|||||||++
T Consensus 156 --------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il 191 (324)
T 3mtl_A 156 --------------------------------------------TYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIF 191 (324)
T ss_dssp ---------------------------------------------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHH
T ss_pred --------------------------------------------ccccccCcccccChhhhcCCCCCCcHHHHHHHHHHH
Confidence 0011367999999999987 4589999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhh--cCCCCccc--------------------------cccCchHHHHHHHcCCCCCC
Q 004998 302 FELFC---PFSTGEEKTRTMSSLR--HRVLPPQL--------------------------LLKFPKEASFCLWLLHPEPS 350 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~--~~~~p~~~--------------------------~~~~p~~~~li~~~L~~dP~ 350 (720)
|||++ ||.............. ....+..+ ....+...+||.+||++||.
T Consensus 192 ~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~ 271 (324)
T 3mtl_A 192 YEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGR 271 (324)
T ss_dssp HHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGG
T ss_pred HHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcc
Confidence 99999 7766544332222211 11111100 01223445999999999999
Q ss_pred CCCChHHHHcCcccCCCcc
Q 004998 351 GRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 351 ~Rpta~eiL~hp~~~~~~~ 369 (720)
+|||+.|+|+||||.....
T Consensus 272 ~R~t~~e~l~hp~f~~~~~ 290 (324)
T 3mtl_A 272 NRISAEDAMKHPFFLSLGE 290 (324)
T ss_dssp GSCCHHHHTTSGGGGGGCS
T ss_pred cCCCHHHHhcChhhhhccc
Confidence 9999999999999998744
No 65
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=1.3e-34 Score=310.77 Aligned_cols=209 Identities=17% Similarity=0.206 Sum_probs=157.8
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..+|..+|.+++||||+++++ ++.... .+|+||||.+++|.+++.... .+++..++.|+.||+.||.|||++||+
T Consensus 80 ~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~L~~~~~~~~-~~~~~~~~~i~~ql~~~l~~LH~~~iv 154 (329)
T 3gbz_A 80 AIREVSLLKELQHRNIIELKS-VIHHNH---RLHLIFEYAENDLKKYMDKNP-DVSMRVIKSFLYQLINGVNFCHSRRCL 154 (329)
T ss_dssp CHHHHHHGGGCCCTTBCCEEE-EEEETT---EEEEEEECCSEEHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHcCCCCcceEEE-EEecCC---EEEEEEecCCCCHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHhCCEE
Confidence 347888999999999999999 555443 689999997679999996544 499999999999999999999999999
Q ss_pred eccCCCCcEEEc-----cCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCC
Q 004998 144 VHNVRPSCFVMS-----SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 144 HrDLKP~NILl~-----~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
||||||+|||++ ..+.+||+|||++...+....
T Consensus 155 H~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~~~~------------------------------------------ 192 (329)
T 3gbz_A 155 HRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIR------------------------------------------ 192 (329)
T ss_dssp CSCCCGGGEEEEC-----CCEEEECCTTHHHHHC----------------------------------------------
T ss_pred CCCCCHHHEEEecCCCCccceEEECcCCCccccCCccc------------------------------------------
Confidence 999999999995 445599998888743211100
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC-CCccccchhh
Q 004998 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRL 297 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSL 297 (720)
......||+.|+|||++.+.. ++.++|||||
T Consensus 193 ------------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~Diwsl 224 (329)
T 3gbz_A 193 ------------------------------------------------QFTHEIITLWYRPPEILLGSRHYSTSVDIWSI 224 (329)
T ss_dssp -------------------------------------------------------CCTTCCHHHHTTCCCCCTHHHHHHH
T ss_pred ------------------------------------------------ccCCCcCCccccCHHHhcCCCCCCcHHHHHHH
Confidence 001146799999999998755 8999999999
Q ss_pred hhhhhhccc---cCCCCchHHHHHHHhhcCCCCcc---------------------------ccc-cCchHHHHHHHcCC
Q 004998 298 GVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQ---------------------------LLL-KFPKEASFCLWLLH 346 (720)
Q Consensus 298 Gvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~---------------------------~~~-~~p~~~~li~~~L~ 346 (720)
||++|||++ ||............+.....|+. +.. ..+...+||.+||+
T Consensus 225 G~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~ 304 (329)
T 3gbz_A 225 ACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLE 304 (329)
T ss_dssp HHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTC
T ss_pred HHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHcc
Confidence 999999999 67666554333333222111110 000 12344599999999
Q ss_pred CCCCCCCChHHHHcCcccCCC
Q 004998 347 PEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 347 ~dP~~Rpta~eiL~hp~~~~~ 367 (720)
+||.+|||+.|+|+||||+..
T Consensus 305 ~dP~~R~t~~e~l~hp~f~~~ 325 (329)
T 3gbz_A 305 MDPVKRISAKNALEHPYFSHN 325 (329)
T ss_dssp SSGGGSCCHHHHHTSGGGSSS
T ss_pred CChhhCCCHHHHhCCcccCCC
Confidence 999999999999999999975
No 66
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=1.4e-34 Score=316.38 Aligned_cols=208 Identities=18% Similarity=0.215 Sum_probs=165.6
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..+|.+++|||||++++ ++.... .+|+|||| .|++|.+++......+++.+++.++.||+.||.|||++||+
T Consensus 134 ~~E~~~l~~l~hpnIv~~~~-~~~~~~---~~~lv~E~~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iv 209 (373)
T 2x4f_A 134 KNEISVMNQLDHANLIQLYD-AFESKN---DIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYIL 209 (373)
T ss_dssp HHHHHHHTTCCCTTBCCEEE-EEECSS---EEEEEEECCTTCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHhCCCCCCCeEEE-EEEECC---EEEEEEeCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 37888999999999999999 555543 57999999 88999999965555699999999999999999999999999
Q ss_pred eccCCCCcEEE--ccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 144 VHNVRPSCFVM--SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 144 HrDLKP~NILl--~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
||||||+|||+ +.++.+||+|||++.......
T Consensus 210 H~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~---------------------------------------------- 243 (373)
T 2x4f_A 210 HLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE---------------------------------------------- 243 (373)
T ss_dssp CCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC----------------------------------------------
T ss_pred cccCCHHHEEEecCCCCcEEEEeCCCceecCCcc----------------------------------------------
Confidence 99999999999 466789999988874321110
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
.....+||+.|+|||++.+..++.++|||||||++
T Consensus 244 ---------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il 278 (373)
T 2x4f_A 244 ---------------------------------------------KLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIA 278 (373)
T ss_dssp ---------------------------------------------BCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHH
T ss_pred ---------------------------------------------ccccccCCCcEeChhhccCCCCCcHHhHHHHHHHH
Confidence 00113689999999999988899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcC-CCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRHR-VLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~-~~p~~~~~~~-p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|||++ ||............+... .+++.....+ +...+||.+||.+||.+|||+.|+|+||||...
T Consensus 279 ~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~hp~~~~~ 349 (373)
T 2x4f_A 279 YMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFISKLLIKEKSWRISASEALKHPWLSDH 349 (373)
T ss_dssp HHHHHSSCTTCCSSHHHHHHHHHHTCCCSCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHCH
T ss_pred HHHHhCCCCCCCCCHHHHHHHHHhccCCCChhhhccCCHHHHHHHHHHcCCChhhCCCHHHHhcCcCcCCC
Confidence 99999 776655543333333222 2233333333 445599999999999999999999999999875
No 67
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=4.5e-34 Score=307.70 Aligned_cols=203 Identities=24% Similarity=0.326 Sum_probs=161.1
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCC-CHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDV-SLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~gg-sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+..+|..+|.+++||||+++++ ++.+.. .+++|||| .++ +|.+++.... .+++..++.|+.||+.||.|||++
T Consensus 75 ~~~~E~~~l~~l~h~~Iv~~~~-~~~~~~---~~~lv~e~~~~g~~l~~~~~~~~-~l~~~~~~~i~~qi~~~L~~LH~~ 149 (335)
T 3dls_A 75 KVTLEIAILSRVEHANIIKVLD-IFENQG---FFQLVMEKHGSGLDLFAFIDRHP-RLDEPLASYIFRQLVSAVGYLRLK 149 (335)
T ss_dssp EEEHHHHHHTTCCCTTBCCEEE-EEECSS---EEEEEEECCTTSCBHHHHHHTCC-CCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhCCCCCEeeEEE-EEeeCC---EEEEEEEeCCCCccHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC
Confidence 4557888999999999999999 555543 67999998 444 9999996554 499999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004998 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+|||++.++.+||+|||++.......
T Consensus 150 ~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~--------------------------------------------- 184 (335)
T 3dls_A 150 DIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGK--------------------------------------------- 184 (335)
T ss_dssp TEECSCCSGGGEEECTTSCEEECCCTTCEECCTTC---------------------------------------------
T ss_pred CeEEeccCHHHEEEcCCCcEEEeecccceECCCCC---------------------------------------------
Confidence 99999999999999999999999998874321110
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCC-Cccccchhhhh
Q 004998 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYRLGV 299 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~-s~~sDIwSLGv 299 (720)
......||+.|+|||++.+..+ +.++|||||||
T Consensus 185 ----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~ 218 (335)
T 3dls_A 185 ----------------------------------------------LFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGV 218 (335)
T ss_dssp ----------------------------------------------CBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHH
T ss_pred ----------------------------------------------ceeccCCCccccChhhhcCCCCCCCcccchhHHH
Confidence 0011468999999999998876 88999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004998 300 LLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
++|||++ ||...... +.....++. ...+...+||.+||++||.+|||+.++|+||||+....
T Consensus 219 il~el~~g~~pf~~~~~~------~~~~~~~~~--~~~~~l~~li~~~L~~dP~~Rps~~ell~hp~~~~~~~ 283 (335)
T 3dls_A 219 TLYTLVFEENPFCELEET------VEAAIHPPY--LVSKELMSLVSGLLQPVPERRTTLEKLVTDPWVTQPVN 283 (335)
T ss_dssp HHHHHHHSSCSCSSGGGG------TTTCCCCSS--CCCHHHHHHHHHHTCSSGGGSCCHHHHHHCTTTTCCCC
T ss_pred HHHHHHhCCCchhhHHHH------HhhccCCCc--ccCHHHHHHHHHHccCChhhCcCHHHHhcCccccCCcc
Confidence 9999999 55442211 111111211 12344569999999999999999999999999988643
No 68
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=5.4e-34 Score=304.56 Aligned_cols=208 Identities=18% Similarity=0.258 Sum_probs=166.5
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..+|.+++||||+++++ ++.+.. .+|+|||| .|++|.+++... ..+++..++.++.||+.||.|||++||
T Consensus 62 ~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~lH~~~i 136 (321)
T 2a2a_A 62 IEREVSILRQVLHHNVITLHD-VYENRT---DVVLILELVSGGELFDFLAQK-ESLSEEEATSFIKQILDGVNYLHTKKI 136 (321)
T ss_dssp HHHHHHHHHHCCCTTBCCEEE-EEECSS---EEEEEECCCCSCBHHHHHHTC-SCEEHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHhCCCCCcceEEE-EEecCC---EEEEEEEcCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 347888999999999999999 555443 68999999 799999999654 359999999999999999999999999
Q ss_pred eeccCCCCcEEEccCC----ceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCC
Q 004998 143 VVHNVRPSCFVMSSFN----HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 143 vHrDLKP~NILl~~~~----~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
+||||||+||+++.++ .++|+|||.+.......
T Consensus 137 vH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~~~~~------------------------------------------- 173 (321)
T 2a2a_A 137 AHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV------------------------------------------- 173 (321)
T ss_dssp ECCCCSGGGEEESCTTSSSCCEEECCCTTCEECCTTC-------------------------------------------
T ss_pred ecCCCChHHEEEecCCCCcCCEEEccCccceecCccc-------------------------------------------
Confidence 9999999999999887 79999888874321110
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhh
Q 004998 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
......||+.|+|||++.+..++.++||||||
T Consensus 174 ------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG 205 (321)
T 2a2a_A 174 ------------------------------------------------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIG 205 (321)
T ss_dssp ------------------------------------------------CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHH
T ss_pred ------------------------------------------------cccccCCCCCccCcccccCCCCCCccccHHHH
Confidence 00113689999999999998899999999999
Q ss_pred hhhhhccc---cCCCCchHHHHHHHhhcC--CCCccccccCch-HHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004998 299 VLLFELFC---PFSTGEEKTRTMSSLRHR--VLPPQLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~--~~p~~~~~~~p~-~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
|++|+|++ ||...... .....+... .+++......+. ..+||.+||++||.+|||+.|+|+||||....
T Consensus 206 ~il~~l~~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~hp~~~~~~ 280 (321)
T 2a2a_A 206 VITYILLSGASPFLGDTKQ-ETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVD 280 (321)
T ss_dssp HHHHHHHHSCCSSCCSSHH-HHHHHHHTTCCCCCHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHSTTTSCSS
T ss_pred HHHHHHHHCCCCCCCCCHH-HHHHHHHhcccccChhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhcCccccCCC
Confidence 99999999 77665443 333334332 233333344444 45999999999999999999999999998763
No 69
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=2.4e-34 Score=307.05 Aligned_cols=212 Identities=16% Similarity=0.179 Sum_probs=162.5
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCC-----CCCCCHHHHHHHHHHHHHHHHHHH
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP-----KRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~-----~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
..+|..+|.+++||||+++++ ++..+. .+|+||||.+++|.+++... ...+++..++.++.||+.||.|||
T Consensus 50 ~~~E~~~l~~l~hp~iv~~~~-~~~~~~---~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH 125 (317)
T 2pmi_A 50 AIREISLMKELKHENIVRLYD-VIHTEN---KLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCH 125 (317)
T ss_dssp HHHHHHHHTTCCBTTBCCEEE-EECCTT---EEEEEEECCCCBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCcceEEE-EEEECC---eEEEEEEecCCCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHH
Confidence 346888999999999999999 555443 68999999667999999432 235899999999999999999999
Q ss_pred HcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCC
Q 004998 139 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
++||+||||||+|||++.++.+||+|||++...+....
T Consensus 126 ~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~------------------------------------------ 163 (317)
T 2pmi_A 126 ENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVN------------------------------------------ 163 (317)
T ss_dssp HTTEECCCCCGGGEEECTTCCEEECCCSSCEETTSCCC------------------------------------------
T ss_pred HCCeeeCCCChHHeEEcCCCCEEECcCccceecCCCcc------------------------------------------
Confidence 99999999999999999999999999998744321100
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-CCCccccchhh
Q 004998 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRL 297 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSL 297 (720)
......||+.|+|||++.+. .++.++|||||
T Consensus 164 ------------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~Diwsl 195 (317)
T 2pmi_A 164 ------------------------------------------------TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSC 195 (317)
T ss_dssp ------------------------------------------------CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHH
T ss_pred ------------------------------------------------cCCCCcccccccCchHhhCCCCCCcHHHHHHH
Confidence 00113689999999999874 58999999999
Q ss_pred hhhhhhccc---cCCCCchHHHHHHHhhc-CCCCc------------------------------ccc-ccCchHHHHHH
Q 004998 298 GVLLFELFC---PFSTGEEKTRTMSSLRH-RVLPP------------------------------QLL-LKFPKEASFCL 342 (720)
Q Consensus 298 Gvll~eLlt---pf~~~~~~~~~~~~l~~-~~~p~------------------------------~~~-~~~p~~~~li~ 342 (720)
||++|||++ ||............... +..++ ... ...+...+||.
T Consensus 196 G~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 275 (317)
T 2pmi_A 196 GCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLH 275 (317)
T ss_dssp HHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHH
Confidence 999999999 67665443222221110 00000 000 11234459999
Q ss_pred HcCCCCCCCCCChHHHHcCcccCCCcc
Q 004998 343 WLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 343 ~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
+||++||.+|||+.|+|+||||++...
T Consensus 276 ~~L~~dP~~Rpt~~e~l~hp~f~~~~~ 302 (317)
T 2pmi_A 276 GLLQLNPDMRLSAKQALHHPWFAEYYH 302 (317)
T ss_dssp HHSCSSGGGSCCHHHHTTSGGGGGGCC
T ss_pred HHCCCCcccCCCHHHHhCChhhhcccc
Confidence 999999999999999999999998744
No 70
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=2.7e-34 Score=321.54 Aligned_cols=207 Identities=17% Similarity=0.252 Sum_probs=161.0
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH-c
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-Q 140 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs-~ 140 (720)
+..+|..+|..++||||+++++ ++.... .+|+|||| .|++|.+++.... .+++..++.++.||+.||.|||+ +
T Consensus 194 ~~~~e~~~l~~l~h~~iv~l~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~ 268 (446)
T 4ejn_A 194 HTLTENRVLQNSRHPFLTALKY-SFQTHD---RLCFVMEYANGGELFFHLSRER-VFSEDRARFYGAEIVSALDYLHSEK 268 (446)
T ss_dssp -------CCCCCSCTTSCCEEE-EEEETT---EEEEEECCCSSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhCCCCeEeeEEE-EEeeCC---EEEEEEeeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHhhcC
Confidence 3446778999999999999999 555443 57999999 8999999995543 49999999999999999999998 9
Q ss_pred CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004998 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
|||||||||+||||+.++.+||+|||++........
T Consensus 269 giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~-------------------------------------------- 304 (446)
T 4ejn_A 269 NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA-------------------------------------------- 304 (446)
T ss_dssp CCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC-----------------------------------------------
T ss_pred CEEECCCCHHHEEECCCCCEEEccCCCceeccCCCc--------------------------------------------
Confidence 999999999999999999999999988743211100
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhh
Q 004998 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
.....+||+.|+|||++.+..++.++|||||||+
T Consensus 305 ----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~i 338 (446)
T 4ejn_A 305 ----------------------------------------------TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVV 338 (446)
T ss_dssp ------------------------------------------------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHH
T ss_pred ----------------------------------------------ccccccCCccccCHhhcCCCCCCCccchhhhHHH
Confidence 0011478999999999999999999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCccccc-cCchHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCC
Q 004998 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 367 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~-~~p~~~~li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~ 367 (720)
+|||++ ||...... .....+....++ ++. ..+...+||.+||++||.+|| ++.|+|+||||...
T Consensus 339 l~ell~g~~Pf~~~~~~-~~~~~i~~~~~~--~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~hp~f~~~ 411 (446)
T 4ejn_A 339 MYEMMCGRLPFYNQDHE-KLFELILMEEIR--FPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGI 411 (446)
T ss_dssp HHHHHHSSCSSCCSSHH-HHHHHHHHCCCC--CCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTC
T ss_pred HHHHhhCCCCCCCCCHH-HHHHHHHhCCCC--CCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhCccccCC
Confidence 999999 77665544 333333322221 112 234556999999999999999 99999999999986
No 71
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=3.4e-34 Score=301.67 Aligned_cols=227 Identities=22% Similarity=0.306 Sum_probs=167.3
Q ss_pred eehhhhcccCCCCCceecccceeecC---------CCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHH
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENE---------AAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIV 134 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~---------~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL 134 (720)
.+|..++.+++||||+++++.+.... .....+|+|||| .|++|.+++......+++..++.++.||+.||
T Consensus 50 ~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l 129 (303)
T 1zy4_A 50 LSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEAL 129 (303)
T ss_dssp HHHHHHHTTCCCTTBCCEEEEEEECCCCCC------CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcccccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHH
Confidence 36888999999999999999443321 123468999999 78999999976555689999999999999999
Q ss_pred HHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccccccccccc
Q 004998 135 YAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVT 214 (720)
Q Consensus 135 ~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~ 214 (720)
.|||++||+||||||+|||++.++.+||+|||.+......... ..+.
T Consensus 130 ~~LH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~------------------------------~~~~--- 176 (303)
T 1zy4_A 130 SYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDI------------------------------LKLD--- 176 (303)
T ss_dssp HHHHHTTCCCSCCCGGGEEECTTSCEEECCCCCCSCTTC-----------------------------------------
T ss_pred HHHHhCCeecccCCHHhEEEcCCCCEEEeeCcchhhcccccch------------------------------hccc---
Confidence 9999999999999999999999999999999988543221000 0000
Q ss_pred CCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-CCCcccc
Q 004998 215 APTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASD 293 (720)
Q Consensus 215 ~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sD 293 (720)
. . .. ...........||+.|+|||++.+. .++.++|
T Consensus 177 --~-------~--------------------~~--------------~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~D 213 (303)
T 1zy4_A 177 --S-------Q--------------------NL--------------PGSSDNLTSAIGTAMYVATEVLDGTGHYNEKID 213 (303)
T ss_dssp ------------------------------------------------------------CTTSCHHHHTSCSCCCTHHH
T ss_pred --c-------c--------------------cc--------------cccccccccCCCcccccCcccccCCCCCcchhh
Confidence 0 0 00 0000001124789999999999865 5899999
Q ss_pred chhhhhhhhhccccCCCCchHHHHHHHhhcC--CCCccccccCch-HHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 294 IYRLGVLLFELFCPFSTGEEKTRTMSSLRHR--VLPPQLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 294 IwSLGvll~eLltpf~~~~~~~~~~~~l~~~--~~p~~~~~~~p~-~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
||||||++|||++||............+... .+|+.+....+. ..+|+.+||++||.+|||+.++++||||...
T Consensus 214 i~slG~il~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~ 290 (303)
T 1zy4_A 214 MYSLGIIFFEMIYPFSTGMERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPVK 290 (303)
T ss_dssp HHHHHHHHHHHHSCCSSHHHHHHHHHHHHSTTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHSSCSCCC
T ss_pred HHHHHHHHHHHHhccCCchhHHHHHHhccccccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCCCCcCCC
Confidence 9999999999999988765554555555432 344444444444 4599999999999999999999999999875
No 72
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=3.3e-34 Score=301.02 Aligned_cols=208 Identities=17% Similarity=0.224 Sum_probs=159.2
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC---CCCCCCHHHHHHHHHHHHHHHHHHH
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~---~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
+..+|..+|.+++||||+++++ ++.+.. .+|+|||| .+++|.+++.. ....+++..++.++.||+.||.|||
T Consensus 66 ~~~~E~~~l~~l~hp~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH 141 (285)
T 3is5_A 66 QIEAEIEVLKSLDHPNIIKIFE-VFEDYH---NMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH 141 (285)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEE-EEECSS---EEEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCchHHhHHH-heecCC---eEEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHH
Confidence 3447888999999999999999 555443 57999999 88999999832 2355999999999999999999999
Q ss_pred HcCceeccCCCCcEEEc---cCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccC
Q 004998 139 SQGIVVHNVRPSCFVMS---SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTA 215 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~---~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~ 215 (720)
++||+||||||+||+++ .++.+||+|||.+.......
T Consensus 142 ~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~~---------------------------------------- 181 (285)
T 3is5_A 142 SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDE---------------------------------------- 181 (285)
T ss_dssp HTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC---------------------------------------------
T ss_pred hCCEEECCCCHHHEEEecCCCCCCEEEEeeecceecCCcc----------------------------------------
Confidence 99999999999999994 56789999888874321110
Q ss_pred CCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccch
Q 004998 216 PTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIY 295 (720)
Q Consensus 216 ~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIw 295 (720)
......||+.|+|||++.+ .++.++|||
T Consensus 182 ---------------------------------------------------~~~~~~~t~~y~aPE~~~~-~~~~~~Di~ 209 (285)
T 3is5_A 182 ---------------------------------------------------HSTNAAGTALYMAPEVFKR-DVTFKCDIW 209 (285)
T ss_dssp --------------------------------------------------------CTTGGGCCHHHHTT-CCCHHHHHH
T ss_pred ---------------------------------------------------cCcCcccccCcCChHHhcc-CCCcccCee
Confidence 0011468999999999864 589999999
Q ss_pred hhhhhhhhccc---cCCCCchHHHHHHHhh-cCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCC
Q 004998 296 RLGVLLFELFC---PFSTGEEKTRTMSSLR-HRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 366 (720)
Q Consensus 296 SLGvll~eLlt---pf~~~~~~~~~~~~l~-~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~ 366 (720)
||||++|||++ ||.............. ....+.......+...+|+.+||++||.+|||+.|+|+||||++
T Consensus 210 slG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~f~~ 284 (285)
T 3is5_A 210 SAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRPLTPQAVDLLKQMLTKDPERRPSAAQVLHHEWFKQ 284 (285)
T ss_dssp HHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCC--CCCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGGC
T ss_pred hHHHHHHHHHhCCCCCCCCCHHHHHhhhccCCcccccccCcCCHHHHHHHHHHccCChhhCcCHHHHhcCHHhhc
Confidence 99999999999 7766544322222221 12222222233455669999999999999999999999999985
No 73
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=1.2e-34 Score=318.78 Aligned_cols=212 Identities=18% Similarity=0.265 Sum_probs=161.2
Q ss_pred eeehhhhcccCC--CCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 64 KHSDGVELTHGD--HLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 64 ~~~e~~~Ls~l~--HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
..+|..+|.++. |||||++++ ++.... .+|+|||+.+++|.+++.... .+++.+++.|+.||+.||.|||++|
T Consensus 101 ~~~Ei~~l~~l~~~~~~iv~~~~-~~~~~~---~~~lv~E~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH~~~ 175 (390)
T 2zmd_A 101 YRNEIAYLNKLQQHSDKIIRLYD-YEITDQ---YIYMVMECGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQHG 175 (390)
T ss_dssp HHHHHHHHHHHTTTCTTBCCEEE-EEECSS---EEEEEEECCSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHcccCCCeEEEEEE-EEecCC---EEEEEEecCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 347778888886 599999999 554443 589999999999999996544 5899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++ ++.+||+|||++.........
T Consensus 176 ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~~-------------------------------------------- 210 (390)
T 2zmd_A 176 IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTS-------------------------------------------- 210 (390)
T ss_dssp CCCCCCCGGGEEES-SSCEEECCCSSSCCC--------------------------------------------------
T ss_pred eeecCCCHHHEEEE-CCeEEEEecCccccccCCCcc--------------------------------------------
Confidence 99999999999995 689999999887443211000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-----------CCCCc
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-----------APVSC 290 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-----------~~~s~ 290 (720)
......+||+.|+|||++.+ ..++.
T Consensus 211 --------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~ 246 (390)
T 2zmd_A 211 --------------------------------------------VVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISP 246 (390)
T ss_dssp -----------------------------------------------CCSCCCGGGCCHHHHHCC------------CCH
T ss_pred --------------------------------------------ccCCCCCcCCCccChHHhhhccccccccccccCCCC
Confidence 00011478999999999975 35899
Q ss_pred cccchhhhhhhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCC
Q 004998 291 ASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNE 366 (720)
Q Consensus 291 ~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~ 366 (720)
++|||||||+||||++ ||.........+..+........++...+ ...+||.+||..||.+|||+.|+|+||||..
T Consensus 247 ~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~ 326 (390)
T 2zmd_A 247 KSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQI 326 (390)
T ss_dssp HHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHS
T ss_pred hhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHHHhCccccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhhCcCccc
Confidence 9999999999999999 67654443333444443333333333333 4559999999999999999999999999987
Q ss_pred Ccc
Q 004998 367 PRD 369 (720)
Q Consensus 367 ~~~ 369 (720)
...
T Consensus 327 ~~~ 329 (390)
T 2zmd_A 327 QTH 329 (390)
T ss_dssp CC-
T ss_pred cCc
Confidence 643
No 74
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=2.5e-34 Score=312.88 Aligned_cols=207 Identities=15% Similarity=0.171 Sum_probs=154.3
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..++..++|||||++++ ++.+.. .+|+|||| .|++|.+++...+ .+++.+++.++.||+.||.|||++||+
T Consensus 64 ~~E~~~l~~l~hpniv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~ql~~~L~~LH~~~iv 138 (361)
T 3uc3_A 64 QREIINHRSLRHPNIVRFKE-VILTPT---HLAIIMEYASGGELYERICNAG-RFSEDEARFFFQQLLSGVSYCHSMQIC 138 (361)
T ss_dssp HHHHHHHHHCCCTTBCCEEE-EEECSS---EEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHhCCCCCCCcEEE-EEeeCC---EEEEEEEeCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 37788899999999999999 555443 58999999 7999999995543 499999999999999999999999999
Q ss_pred eccCCCCcEEEccCCc--eEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 144 VHNVRPSCFVMSSFNH--VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 144 HrDLKP~NILl~~~~~--vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
||||||+|||++.++. +||+|||++.......
T Consensus 139 H~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~---------------------------------------------- 172 (361)
T 3uc3_A 139 HRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS---------------------------------------------- 172 (361)
T ss_dssp SCCCCGGGEEECSSSSCCEEECCCCCC-----------------------------------------------------
T ss_pred cCCCCHHHEEEcCCCCceEEEeecCccccccccC----------------------------------------------
Confidence 9999999999987665 9999888773210000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCcc-ccchhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCA-SDIYRLGVL 300 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~-sDIwSLGvl 300 (720)
.....+||++|+|||++.+..++.+ +|||||||+
T Consensus 173 ---------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~i 207 (361)
T 3uc3_A 173 ---------------------------------------------QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVT 207 (361)
T ss_dssp -----------------------------------------------------CTTSCHHHHHCSSCCHHHHHHHHHHHH
T ss_pred ---------------------------------------------CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHH
Confidence 0011468999999999988887554 999999999
Q ss_pred hhhccc---cCCCCch---HHHHHHHhhcCCC-CccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 301 LFELFC---PFSTGEE---KTRTMSSLRHRVL-PPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 301 l~eLlt---pf~~~~~---~~~~~~~l~~~~~-p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
+|+|++ ||..... ....+..+..... .+......+...+||.+||++||.+|||+.|+++||||...
T Consensus 208 l~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~~ 281 (361)
T 3uc3_A 208 LYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPECCHLISRIFVADPATRISIPEIKTHSWFLKN 281 (361)
T ss_dssp HHHHHHSSCSCC----CCCHHHHHHHHHTTCCCCCTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTSHHHHTT
T ss_pred HHHHHhCCCCCCCCccHHHHHHHHHHHhcCCCCCCCcCCCCHHHHHHHHHHccCChhHCcCHHHHHhCcchhcC
Confidence 999999 6654322 2223333332222 22222234555699999999999999999999999999765
No 75
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=2.4e-34 Score=320.70 Aligned_cols=241 Identities=15% Similarity=0.176 Sum_probs=162.9
Q ss_pred eeeehhhhcccCCCCCceecccceeecC--CCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENE--AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~--~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+..+|..+|.+++||||+++++ ++... .....+|+||||.+++|.+++... ..+++..++.+++||+.||.|||++
T Consensus 71 ~~~~E~~~l~~l~h~nIv~l~~-~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~-~~l~~~~~~~i~~qil~aL~~LH~~ 148 (432)
T 3n9x_A 71 RILREITILNRLKSDYIIRLYD-LIIPDDLLKFDELYIVLEIADSDLKKLFKTP-IFLTEEHIKTILYNLLLGENFIHES 148 (432)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-ECCCSCTTTCCCEEEEEECCSEEHHHHHHSS-CCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCCCcceEEE-EEecCCCCcCCeEEEEEecCCcCHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 4558889999999999999999 44333 122468999999778999999654 3499999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004998 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+|||++.++.+||+|||+++........... .++.-...
T Consensus 149 givHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~---------------------------~~~~~~~~----- 196 (432)
T 3n9x_A 149 GIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIV---------------------------NDLEENEE----- 196 (432)
T ss_dssp TEECCCCCGGGEEECTTCCEEECCCTTCEEC-------------------------------------------------
T ss_pred CCCCCCCCHHHeEECCCCCEEEccCCCccccccccccccc---------------------------cccccccc-----
Confidence 9999999999999999999999999998654322110000 00000000
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccc-cCCCCCccccchhhhh
Q 004998 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEEL-AGAPVSCASDIYRLGV 299 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l-~~~~~s~~sDIwSLGv 299 (720)
. ...........+..+||++|+|||++ .+..|+.++|||||||
T Consensus 197 -~-----------------------------------~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~ 240 (432)
T 3n9x_A 197 -P-----------------------------------GPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGC 240 (432)
T ss_dssp --------------------------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHH
T ss_pred -c-----------------------------------cccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHH
Confidence 0 00000000011236899999999986 4555999999999999
Q ss_pred hhhhccc-------------c-CCCCch----------------HHHHH------------------------HHhhcC-
Q 004998 300 LLFELFC-------------P-FSTGEE----------------KTRTM------------------------SSLRHR- 324 (720)
Q Consensus 300 ll~eLlt-------------p-f~~~~~----------------~~~~~------------------------~~l~~~- 324 (720)
++|||++ | |.+... ....+ ..+...
T Consensus 241 il~ell~g~~p~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~ 320 (432)
T 3n9x_A 241 IFAELLNMLQSHINDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFP 320 (432)
T ss_dssp HHHHHHTTCTTTCSSGGGCCCSCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSC
T ss_pred HHHHHHhcccccccccccccccCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCC
Confidence 9999995 2 211110 00000 000000
Q ss_pred -CCCc----cccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCccchHH
Q 004998 325 -VLPP----QLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEE 373 (720)
Q Consensus 325 -~~p~----~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~~l~e 373 (720)
..+. .+....+...+||.+||++||.+|||++|+|+||||+.......+
T Consensus 321 ~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~~~~~e 374 (432)
T 3n9x_A 321 HRKPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKDVRKKKLE 374 (432)
T ss_dssp CCCCCCHHHHSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTCGGGTTTCCTTTC
T ss_pred CCCCCCHHHHCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcChhhhhccCcccC
Confidence 0000 012233455699999999999999999999999999998654433
No 76
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=7.5e-34 Score=321.39 Aligned_cols=206 Identities=18% Similarity=0.214 Sum_probs=163.5
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..+|.+++|||||++++ ++.+.. .+|+|||| .|++|.+++.... .+++.+++.++.||+.||.|||++||
T Consensus 68 ~~~E~~~l~~l~hpniv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~al~~lH~~~i 142 (486)
T 3mwu_A 68 ILREVELLKKLDHPNIMKLFE-ILEDSS---SFYIVGELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMHKHNI 142 (486)
T ss_dssp HHHHHHHHHHCCCTTBCCEEE-EEECSS---EEEEEECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhCCCCCcCeEEE-EEEcCC---EEEEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 347888999999999999999 565543 68999999 8999999995443 49999999999999999999999999
Q ss_pred eeccCCCCcEEEc---cCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004998 143 VVHNVRPSCFVMS---SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 143 vHrDLKP~NILl~---~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||||||+|||++ .++.+||+|||++.......
T Consensus 143 vH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-------------------------------------------- 178 (486)
T 3mwu_A 143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT-------------------------------------------- 178 (486)
T ss_dssp CCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC---------------------------------------------
T ss_pred EeccCchHHEEEecCCCCCCEEEEECCcCeECCCCC--------------------------------------------
Confidence 9999999999995 45679999888874321110
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhh
Q 004998 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
.....+||+.|+|||++.+. |+.++|||||||
T Consensus 179 -----------------------------------------------~~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~ 210 (486)
T 3mwu_A 179 -----------------------------------------------KMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGV 210 (486)
T ss_dssp --------------------------------------------------CCTTGGGGCCGGGGGSC-CCHHHHHHHHHH
T ss_pred -----------------------------------------------ccCCCcCCCCCCCHHHhCCC-CCchhhHHHHHH
Confidence 00114689999999999875 999999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhcCCCC---ccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 300 LLFELFC---PFSTGEEKTRTMSSLRHRVLP---PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~~~~p---~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
++|+|++ ||...... .....+..+..+ +.+....+...+||.+||++||.+|||+.++|+||||+..
T Consensus 211 il~~ll~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~hp~~~~~ 283 (486)
T 3mwu_A 211 ILYILLSGTPPFYGKNEY-DILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKY 283 (486)
T ss_dssp HHHHHHHSSCSSCCSSHH-HHHHHHHHTCCCSCSGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHCHHHHHT
T ss_pred HHHHHHhCCCCCCCCCHH-HHHHHHHhCCCCCCCcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCHhhccC
Confidence 9999999 67665544 344444444332 2222334455699999999999999999999999999865
No 77
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=2.5e-34 Score=300.81 Aligned_cols=211 Identities=19% Similarity=0.216 Sum_probs=165.8
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++.+++||||+++++ ++.... ..+++||| .|++|.+++.... .+++..++.++.||+.||.|||++|
T Consensus 51 ~~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~~v~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~ 125 (284)
T 3kk8_A 51 KLEREARICRKLQHPNIVRLHD-SIQEES---FHYLVFDLVTGGELFEDIVARE-FYSEADASHCIQQILESIAYCHSNG 125 (284)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EEECSS---EEEEEECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcCCCCcCeEEE-EEEcCC---EEEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3447888999999999999999 555443 57999999 8899999985443 4999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCc---eEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCC
Q 004998 142 IVVHNVRPSCFVMSSFNH---VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~---vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
|+||||||+||+++.++. +||+|||.+...+...
T Consensus 126 i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~------------------------------------------- 162 (284)
T 3kk8_A 126 IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE------------------------------------------- 162 (284)
T ss_dssp EECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSSC-------------------------------------------
T ss_pred cCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccCc-------------------------------------------
Confidence 999999999999986655 9999888873321110
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhh
Q 004998 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
......||+.|+|||++.+..++.++||||||
T Consensus 163 ------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG 194 (284)
T 3kk8_A 163 ------------------------------------------------AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACG 194 (284)
T ss_dssp ------------------------------------------------BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHH
T ss_pred ------------------------------------------------cccCCCCCcCCcCchhhcCCCCCcccchHHHH
Confidence 00114689999999999999899999999999
Q ss_pred hhhhhccc---cCCCCchHHHHHHHhhcCC--CCccc-cccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCccc
Q 004998 299 VLLFELFC---PFSTGEEKTRTMSSLRHRV--LPPQL-LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~--~p~~~-~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
|++|+|++ ||...... .....+.... .+... ....+...+|+.+||++||.+|||+.|+|+||||......
T Consensus 195 ~~l~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~~ 271 (284)
T 3kk8_A 195 VILYILLVGYPPFWDEDQH-RLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICNRERV 271 (284)
T ss_dssp HHHHHHHHSSCSSCCSSHH-HHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTSHHHHSCCCG
T ss_pred HHHHHHHHCCCCCCCCchh-HHHHHHHhccccCCchhhcccCHHHHHHHHHHcccChhhCCCHHHHhcCccccCChhH
Confidence 99999999 66655443 3333333322 22222 2333455699999999999999999999999999887443
No 78
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=1.4e-33 Score=301.94 Aligned_cols=207 Identities=17% Similarity=0.290 Sum_probs=165.4
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..++.+++||||+++++ ++.... ..|+|||| .|++|.+++.+. .+++..+..++.||+.||.|||++||+
T Consensus 90 ~~E~~~l~~l~h~niv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~--~l~~~~~~~i~~qi~~~L~~LH~~~iv 163 (321)
T 2c30_A 90 FNEVVIMRDYQHFNVVEMYK-SYLVGE---ELWVLMEFLQGGALTDIVSQV--RLNEEQIATVCEAVLQALAYLHAQGVI 163 (321)
T ss_dssp HHHHHHHTTCCCTTBCCEEE-EEEETT---EEEEEECCCCSCBHHHHHTTC--CCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHhCCCCCcceEEE-EEEECC---EEEEEEecCCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 37788999999999999999 554443 57999999 899999998543 499999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.+||+|||++........
T Consensus 164 H~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~----------------------------------------------- 196 (321)
T 2c30_A 164 HRDIKSDSILLTLDGRVKLSDFGFCAQISKDVP----------------------------------------------- 196 (321)
T ss_dssp CCCCSGGGEEECTTCCEEECCCTTCEECCSSSC-----------------------------------------------
T ss_pred cCCCCHHHEEECCCCcEEEeeeeeeeecccCcc-----------------------------------------------
Confidence 999999999999999999999988743211100
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......||+.|+|||++.+..++.++|||||||++||
T Consensus 197 -------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~e 233 (321)
T 2c30_A 197 -------------------------------------------KRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIE 233 (321)
T ss_dssp -------------------------------------------CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHH
T ss_pred -------------------------------------------ccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHH
Confidence 0011468999999999999889999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCCCCc-cccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004998 304 LFC---PFSTGEEKTRTMSSLRHRVLPP-QLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~~~p~-~~~~~~-p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
|++ ||...... ..+..+.....+. ...... +...+|+.+||+.||.+|||+.|+|+||||....
T Consensus 234 l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~~~ 302 (321)
T 2c30_A 234 MVDGEPPYFSDSPV-QAMKRLRDSPPPKLKNSHKVSPVLRDFLERMLVRDPQERATAQELLDHPFLLQTG 302 (321)
T ss_dssp HHHSSCTTTTSCHH-HHHHHHHHSSCCCCTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGGGCC
T ss_pred HHhCCCCCCCCCHH-HHHHHHhcCCCCCcCccccCCHHHHHHHHHHccCChhhCcCHHHHhcChhhccCC
Confidence 999 66655443 3344444433222 112223 4455999999999999999999999999998753
No 79
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=1.7e-34 Score=309.79 Aligned_cols=207 Identities=18% Similarity=0.244 Sum_probs=161.3
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++||||+++++ ++.... .+|+|||| .|++|.+++...+ .+++..++.++.||+.||.|||++|
T Consensus 67 ~~~~E~~~l~~l~hp~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~lH~~~ 141 (327)
T 3a62_A 67 HTKAERNILEEVKHPFIVDLIY-AFQTGG---KLYLILEYLSGGELFMQLEREG-IFMEDTACFYLAEISMALGHLHQKG 141 (327)
T ss_dssp ----HHHHHHHCCCTTBCCEEE-EEECSS---CEEEEEECCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCccceeE-EEEcCC---EEEEEEeCCCCCcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3447888999999999999999 555543 68999999 8999999995543 4899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||++....... .
T Consensus 142 ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---------------------------------~------------ 176 (327)
T 3a62_A 142 IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDG---------------------------------T------------ 176 (327)
T ss_dssp CCCCCCCTTTEEECTTSCEEECCCSCC-----------------------------------------------------
T ss_pred EEcccCCHHHeEECCCCcEEEEeCCcccccccCC---------------------------------c------------
Confidence 9999999999999999999999998874321100 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......||+.|+|||++.+..++.++|||||||++
T Consensus 177 ---------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il 211 (327)
T 3a62_A 177 ---------------------------------------------VTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALM 211 (327)
T ss_dssp -----------------------------------------------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHH
T ss_pred ---------------------------------------------cccccCCCcCccCHhhCcCCCCCCcccchhHHHHH
Confidence 00114689999999999988899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCC
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 367 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~ 367 (720)
|||++ ||....... .+..+....+ .++..+ +...+||.+||..||.+|| ++.|+++||||+..
T Consensus 212 ~el~~g~~pf~~~~~~~-~~~~i~~~~~--~~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~hp~f~~~ 283 (327)
T 3a62_A 212 YDMLTGAPPFTGENRKK-TIDKILKCKL--NLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHI 283 (327)
T ss_dssp HHHHHSSCSCCCSSHHH-HHHHHHHTCC--CCCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHSGGGSSC
T ss_pred HHHHHCCCCCCCCCHHH-HHHHHHhCCC--CCCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcCCcccCC
Confidence 99999 776654443 3333333221 112223 4455999999999999999 88999999999876
No 80
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=2.3e-34 Score=300.56 Aligned_cols=223 Identities=15% Similarity=0.137 Sum_probs=152.3
Q ss_pred eeeehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC---CCCCCHHHHHHHHHHHHHHHHHH
Q 004998 63 RKHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---KRSVDVYECLHIFRQIVEIVYAA 137 (720)
Q Consensus 63 r~~~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~---~~~l~~~~~~~i~~QIl~aL~yL 137 (720)
+..+|...+..+ +||||+++++ ++.+.. .+++|||| .|++|.+++... ...+++.+++.++.||+.||.||
T Consensus 56 ~~~~e~~~~~~l~~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~l 131 (289)
T 1x8b_A 56 NALREVYAHAVLGQHSHVVRYFS-AWAEDD---HMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYI 131 (289)
T ss_dssp HHHHHHHHHHHSCSCTTBCCEEE-EEEETT---EEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCeeeeee-eeecCC---eEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHH
Confidence 444677778887 9999999999 554443 68999999 789999999442 24589999999999999999999
Q ss_pred HHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCC
Q 004998 138 HSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 138 Hs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~ 217 (720)
|++||+||||||+|||++.++...+.+.... ..++......++++|||.+....
T Consensus 132 H~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~kl~Dfg~~~~~~ 185 (289)
T 1x8b_A 132 HSMSLVHMDIKPSNIFISRTSIPNAASEEGD--------------------------EDDWASNKVMFKIGDLGHVTRIS 185 (289)
T ss_dssp HHTTEECSCCSGGGEEEC----------------------------------------------CCCEEECCCTTCEETT
T ss_pred HhCCEeecCCCHHHEEEcCCCCCcccccccc--------------------------cccccCCceEEEEcccccccccC
Confidence 9999999999999999997664433221110 00111112234455665543211
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-CCCccccchh
Q 004998 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYR 296 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwS 296 (720)
.. ....||+.|+|||++.+. .+++++||||
T Consensus 186 ~~-------------------------------------------------~~~~gt~~y~aPE~~~~~~~~~~~~Di~s 216 (289)
T 1x8b_A 186 SP-------------------------------------------------QVEEGDSRFLANEVLQENYTHLPKADIFA 216 (289)
T ss_dssp CS-------------------------------------------------CCCCCCGGGCCHHHHTTCCTTHHHHHHHH
T ss_pred Cc-------------------------------------------------cccCCCccccChhHhcCCCCCCchhhHHH
Confidence 00 013579999999999876 4778999999
Q ss_pred hhhhhhhccc--cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 297 LGVLLFELFC--PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 297 LGvll~eLlt--pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|||++|+|++ |+..... ....+.....+.......+...+|+.+||++||.+|||+.|+|+||||...
T Consensus 217 lG~il~~l~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~ 286 (289)
T 1x8b_A 217 LALTVVCAAGAEPLPRNGD---QWHEIRQGRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKHSVLLSA 286 (289)
T ss_dssp HHHHHHHHTTCCCCCSSSH---HHHHHHTTCCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTCTTC---
T ss_pred HHHHHHHHhcCCCCCcchh---HHHHHHcCCCCCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhhChHhhhh
Confidence 9999999999 3332222 233344444433322333455699999999999999999999999999875
No 81
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=2e-34 Score=324.59 Aligned_cols=207 Identities=17% Similarity=0.262 Sum_probs=165.9
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|..++||||+++++ ++.... .+|+|||| .|++|.+++.+. ..+++.+++.++.||+.||.|||++|
T Consensus 62 ~~~~Ei~~l~~l~HpnIv~l~~-~~~~~~---~~~lv~E~~~gg~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~g 136 (476)
T 2y94_A 62 KIRREIQNLKLFRHPHIIKLYQ-VISTPS---DIFMVMEYVSGGELFDYICKN-GRLDEKESRRLFQQILSGVDYCHRHM 136 (476)
T ss_dssp HHHHHHHHHTTCCCTTBCCEEE-EEECSS---EEEEEEECCSSEEHHHHTTSS-SSCCHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHhCCCCCCCcEEE-EEEECC---EEEEEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3447888999999999999999 555543 58999999 799999999654 34999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||++...... .+
T Consensus 137 ivHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~----------------------------------~~----------- 171 (476)
T 2y94_A 137 VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG----------------------------------EF----------- 171 (476)
T ss_dssp EECSCCSGGGEEECTTCCEEECCCSSCEECCTT----------------------------------CC-----------
T ss_pred CCcccccHHHEEEecCCCeEEEeccchhhcccc----------------------------------cc-----------
Confidence 999999999999999999999998887432110 00
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCC-Cccccchhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYRLGVL 300 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~-s~~sDIwSLGvl 300 (720)
....+||+.|+|||++.+..+ +.++|||||||+
T Consensus 172 ----------------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvi 205 (476)
T 2y94_A 172 ----------------------------------------------LRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVI 205 (476)
T ss_dssp ----------------------------------------------BCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHH
T ss_pred ----------------------------------------------ccccCCCcCeEChhhccCCCCCCCcceehhhHHH
Confidence 011468999999999998875 789999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
+|||++ ||...... .....+..+.+.. .....+...+||.+||+.||.+|||+.|+++||||+..
T Consensus 206 l~elltG~~Pf~~~~~~-~~~~~i~~~~~~~-p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~hp~~~~~ 273 (476)
T 2y94_A 206 LYALLCGTLPFDDDHVP-TLFKKICDGIFYT-PQYLNPSVISLLKHMLQVDPMKRATIKDIREHEWFKQD 273 (476)
T ss_dssp HHHHHHSSCSSCCSSSH-HHHHHHHTTCCCC-CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHTT
T ss_pred HHHHhhCCCCCCCCCHH-HHHHHHhcCCcCC-CccCCHHHHHHHHHHcCCCchhCcCHHHHHhCHHhhhc
Confidence 999999 77655443 3444444443321 11223455699999999999999999999999999864
No 82
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=5.6e-34 Score=314.79 Aligned_cols=216 Identities=16% Similarity=0.152 Sum_probs=154.4
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhC--------CCCCCCHHHHHHHHHHHHHHHH
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK--------PKRSVDVYECLHIFRQIVEIVY 135 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~--------~~~~l~~~~~~~i~~QIl~aL~ 135 (720)
..+|..+|.+++|||||++++ ++.... ...+|+||||.+++|.+++.. ....+++..++.|+.||+.||.
T Consensus 65 ~~~E~~~l~~l~hpniv~~~~-~~~~~~-~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~ 142 (405)
T 3rgf_A 65 ACREIALLRELKHPNVISLQK-VFLSHA-DRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIH 142 (405)
T ss_dssp HHHHHHHHHHCCCTTBCCCCE-EEEETT-TTEEEEEEECCSEEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCeeeEee-EEecCC-CCeEEEEEeCCCCCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHH
Confidence 347888999999999999999 443322 236899999977899998831 1224899999999999999999
Q ss_pred HHHHcCceeccCCCCcEEE----ccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccc
Q 004998 136 AAHSQGIVVHNVRPSCFVM----SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQ 211 (720)
Q Consensus 136 yLHs~gIvHrDLKP~NILl----~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfg 211 (720)
|||++||+||||||+|||+ +.++.+||+|||++...+..... .
T Consensus 143 ~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~~~--------------------------------~- 189 (405)
T 3rgf_A 143 YLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKP--------------------------------L- 189 (405)
T ss_dssp HHHHTTCCCCCCCGGGEEECCSSTTTTCEEECCTTCCC------------------------------------------
T ss_pred HHHhCCEeCCCcCHHHeEEecCCCCCCcEEEEECCCceecCCCCcc--------------------------------c-
Confidence 9999999999999999999 67789999999988543211000 0
Q ss_pred cccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC-CCc
Q 004998 212 LVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSC 290 (720)
Q Consensus 212 la~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~ 290 (720)
......+||++|+|||++.+.. ++.
T Consensus 190 ------------------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~ 215 (405)
T 3rgf_A 190 ------------------------------------------------------ADLDPVVVTFWYRAPELLLGARHYTK 215 (405)
T ss_dssp -------------------------------------------------------------CCCTTCCHHHHTTCCSCCH
T ss_pred ------------------------------------------------------ccCCCceecCcccCchhhcCCCcccc
Confidence 0001247899999999998854 899
Q ss_pred cccchhhhhhhhhccc---cCCCCchH--------HHHHHHhhc--CCCCcccc--------------------------
Q 004998 291 ASDIYRLGVLLFELFC---PFSTGEEK--------TRTMSSLRH--RVLPPQLL-------------------------- 331 (720)
Q Consensus 291 ~sDIwSLGvll~eLlt---pf~~~~~~--------~~~~~~l~~--~~~p~~~~-------------------------- 331 (720)
++|||||||++|||++ ||...... ...+..+.. +..+...+
T Consensus 216 ~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (405)
T 3rgf_A 216 AIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSL 295 (405)
T ss_dssp HHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCH
T ss_pred hhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchh
Confidence 9999999999999999 66543221 011111110 00110000
Q ss_pred ---------ccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004998 332 ---------LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 332 ---------~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
...+...+||.+||++||.+|||+.|+|+||||....
T Consensus 296 ~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~hp~f~~~~ 341 (405)
T 3rgf_A 296 IKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLEDP 341 (405)
T ss_dssp HHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTSSS
T ss_pred hhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhccCC
Confidence 0134456999999999999999999999999998763
No 83
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=1.3e-34 Score=302.60 Aligned_cols=203 Identities=17% Similarity=0.231 Sum_probs=161.7
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..++.+++||||+++++ ++.+.. .+++|||| .+++|.+++.... .+++..++.++.||+.||.|||++||+
T Consensus 57 ~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~qi~~~l~~LH~~~i~ 131 (279)
T 3fdn_A 57 RREVEIQSHLRHPNILRLYG-YFHDAT---RVYLILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYCHSKRVI 131 (279)
T ss_dssp HHHHHHHTTCCCTTBCCEEE-EEECSS---EEEEEECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHTTTCE
T ss_pred HHHHHHHHcCCCCCCcchhh-eEecCC---EEEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCEe
Confidence 36778999999999999999 555543 57999999 8899999995543 499999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+||+++.++.++|+|||.+......
T Consensus 132 H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~------------------------------------------------- 162 (279)
T 3fdn_A 132 HRDIKPENLLLGSAGELKIADFGWSVHAPSS------------------------------------------------- 162 (279)
T ss_dssp ECCCCGGGEEECTTSCEEECSCCEESCC----------------------------------------------------
T ss_pred cccCChHhEEEcCCCCEEEEeccccccCCcc-------------------------------------------------
Confidence 9999999999999999999999876322110
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......||+.|+|||++.+..++.++|||||||++|+
T Consensus 163 -------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ 199 (279)
T 3fdn_A 163 -------------------------------------------RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 199 (279)
T ss_dssp ------------------------------------------------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHH
T ss_pred -------------------------------------------cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHH
Confidence 0011467999999999999889999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 304 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|++ ||...... .....+.....+ ++...+ ...+||.+||++||.+|||+.|+|+||||+..
T Consensus 200 l~~g~~p~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h~~~~~~ 264 (279)
T 3fdn_A 200 FLVGKPPFEANTYQ-ETYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITAN 264 (279)
T ss_dssp HHHSSCTTCCSSHH-HHHHHHHHTCCC--CCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHCHHHHHH
T ss_pred HHHCCCCCCCCcHH-HHHHHHHhCCCC--CCCcCCHHHHHHHHHHhccChhhCCCHHHHhhCccccCC
Confidence 999 66654433 333333332211 222233 44599999999999999999999999999865
No 84
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=2.7e-34 Score=311.79 Aligned_cols=220 Identities=15% Similarity=0.195 Sum_probs=164.3
Q ss_pred eeeehhhhcccCCCCCceecccceeecC-CCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENE-AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~-~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++||||+++++.+.... .....+|+||||.+++|.+++......+++..++.++.||+.||.|||++|
T Consensus 75 ~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ 154 (362)
T 3pg1_A 75 RVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAG 154 (362)
T ss_dssp HHHHHHHHHHHCCCTTBCCCSEEEEECCTTTCCEEEEEEECCSEEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCcCccceeeeEEeccCCCcceEEEEEccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCc
Confidence 3447888999999999999999444332 334468999999778999999776667999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||.+.......
T Consensus 155 ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~---------------------------------------------- 188 (362)
T 3pg1_A 155 VVHRDLHPGNILLADNNDITICDFNLAREDTADA---------------------------------------------- 188 (362)
T ss_dssp CCCCCCCGGGEEECTTCCEEECCTTC------------------------------------------------------
T ss_pred CEecCCChHHEEEcCCCCEEEEecCccccccccc----------------------------------------------
Confidence 9999999999999999999999998874211100
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-CCCCccccchhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVL 300 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sDIwSLGvl 300 (720)
......||++|+|||++.+ ..++.++|||||||+
T Consensus 189 ---------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~i 223 (362)
T 3pg1_A 189 ---------------------------------------------NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCV 223 (362)
T ss_dssp ----------------------------------------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHH
T ss_pred ---------------------------------------------ccceecccceecCcHHhcCCCCCCcHhHHHhHHHH
Confidence 0011468999999999987 558999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCC-------------------------CCc----c-ccccCchHHHHHHHcCCC
Q 004998 301 LFELFC---PFSTGEEKTRTMSSLRHRV-------------------------LPP----Q-LLLKFPKEASFCLWLLHP 347 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~-------------------------~p~----~-~~~~~p~~~~li~~~L~~ 347 (720)
+|+|++ ||............+.... .+. . .....+...+||.+||++
T Consensus 224 l~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~ 303 (362)
T 3pg1_A 224 MAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEF 303 (362)
T ss_dssp HHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCS
T ss_pred HHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcC
Confidence 999999 6766543322222111000 000 0 111234456999999999
Q ss_pred CCCCCCChHHHHcCcccCCCccchHH
Q 004998 348 EPSGRPKMGELLQSEFLNEPRDSMEE 373 (720)
Q Consensus 348 dP~~Rpta~eiL~hp~~~~~~~~l~e 373 (720)
||.+|||+.|+|+||||+....+...
T Consensus 304 dP~~Rpt~~ell~hp~f~~~~~~~~~ 329 (362)
T 3pg1_A 304 NPQRRISTEQALRHPYFESLFDPLDL 329 (362)
T ss_dssp SGGGSCCHHHHHTSGGGTTTCCGGGG
T ss_pred ChhhCCCHHHHHcCchhhhccCcccc
Confidence 99999999999999999988665443
No 85
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=9.4e-34 Score=321.27 Aligned_cols=207 Identities=15% Similarity=0.203 Sum_probs=162.8
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|..++|||||++++ ++.+.. .+|+|||| .|++|.+++.... .+++..++.++.||+.||.|||++|
T Consensus 82 ~~~~E~~~l~~l~hpniv~~~~-~~~~~~---~~~lv~e~~~~g~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~ 156 (494)
T 3lij_A 82 KLLEEVAVLKLLDHPNIMKLYD-FFEDKR---NYYLVMECYKGGELFDEIIHRM-KFNEVDAAVIIKQVLSGVTYLHKHN 156 (494)
T ss_dssp HHHHHHHHHTTCCCTTBCCEEE-EEECSS---EEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCCCeEEE-EEEeCC---EEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3347888999999999999999 665543 67999999 8999999985443 4999999999999999999999999
Q ss_pred ceeccCCCCcEEEccC---CceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCC
Q 004998 142 IVVHNVRPSCFVMSSF---NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 142 IvHrDLKP~NILl~~~---~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
|+||||||+|||++.. +.+||+|||++.......
T Consensus 157 ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~------------------------------------------- 193 (494)
T 3lij_A 157 IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQK------------------------------------------- 193 (494)
T ss_dssp EECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTTB-------------------------------------------
T ss_pred ceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCCc-------------------------------------------
Confidence 9999999999999764 459998888773321110
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhh
Q 004998 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
.....+||++|+|||++.+ .|+.++||||||
T Consensus 194 ------------------------------------------------~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG 224 (494)
T 3lij_A 194 ------------------------------------------------KMKERLGTAYYIAPEVLRK-KYDEKCDVWSIG 224 (494)
T ss_dssp ------------------------------------------------CBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHH
T ss_pred ------------------------------------------------cccccCCCcCeeCHHHHcc-cCCCchhHHHHH
Confidence 0011468999999999875 599999999999
Q ss_pred hhhhhccc---cCCCCchHHHHHHHhhcCCC--Ccccccc-CchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 299 VLLFELFC---PFSTGEEKTRTMSSLRHRVL--PPQLLLK-FPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~~--p~~~~~~-~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|++|+|++ ||...... .....+..+.. +...... .+...+||.+||++||.+|||+.|+|+||||+..
T Consensus 225 ~il~~ll~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~hp~~~~~ 298 (494)
T 3lij_A 225 VILFILLAGYPPFGGQTDQ-EILRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEM 298 (494)
T ss_dssp HHHHHHHHSSCSSCCSSHH-HHHHHHHHTCCCCCSGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHHH
T ss_pred HHHHHHHhCCCCCCCCCHH-HHHHHHHhCCCCCCchhcccCCHHHHHHHHHHCCCChhhCccHHHHhcCcccccC
Confidence 99999999 67665444 34444444332 2222233 3445699999999999999999999999999764
No 86
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=1.3e-33 Score=306.30 Aligned_cols=204 Identities=16% Similarity=0.229 Sum_probs=163.1
Q ss_pred ehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 66 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.|..+|..+ +||||+++++ ++++.. .+|+|||| .|++|.+++.+.+ .+++..++.++.||+.||.|||++||+
T Consensus 69 ~E~~~l~~~~~hp~iv~l~~-~~~~~~---~~~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~giv 143 (353)
T 2i0e_A 69 VEKRVLALPGKPPFLTQLHS-CFQTMD---RLYFVMEYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIAIGLFFLQSKGII 143 (353)
T ss_dssp HHHHHHTCTTCCTTBCCEEE-EEECSS---EEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTCB
T ss_pred HHHHHHHhcCCCCEEeeEEE-EEEcCC---EEEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCEE
Confidence 566678776 8999999999 555543 68999999 8999999996543 499999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.+|++||+|||++........
T Consensus 144 HrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~----------------------------------------------- 176 (353)
T 2i0e_A 144 YRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV----------------------------------------------- 176 (353)
T ss_dssp CCCCCGGGEEECTTSCEEECCCTTCBCCCCTTC-----------------------------------------------
T ss_pred eccCCHHHEEEcCCCcEEEEeCCcccccccCCc-----------------------------------------------
Confidence 999999999999999999999988743211000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
.....+||+.|+|||++.+..++.++|||||||++||
T Consensus 177 -------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e 213 (353)
T 2i0e_A 177 -------------------------------------------TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYE 213 (353)
T ss_dssp -------------------------------------------CBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHH
T ss_pred -------------------------------------------ccccccCCccccChhhhcCCCcCCcccccchHHHHHH
Confidence 0011478999999999999999999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCC-----hHHHHcCcccCCC
Q 004998 304 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rpt-----a~eiL~hp~~~~~ 367 (720)
|++ ||...... .....+....+. ++..+ +...+||.+||+.||.+||+ +.+|++||||+..
T Consensus 214 ll~G~~Pf~~~~~~-~~~~~i~~~~~~--~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h~~f~~~ 283 (353)
T 2i0e_A 214 MLAGQAPFEGEDED-ELFQSIMEHNVA--YPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYI 283 (353)
T ss_dssp HHHSSCSSCCSSHH-HHHHHHHHCCCC--CCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTSGGGTTC
T ss_pred HHcCCCCCCCCCHH-HHHHHHHhCCCC--CCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCccccCC
Confidence 999 77665444 344444433221 22233 44559999999999999994 6999999999876
No 87
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=5.6e-34 Score=309.10 Aligned_cols=202 Identities=16% Similarity=0.221 Sum_probs=152.7
Q ss_pred ehhhhcccCC-----CCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004998 66 SDGVELTHGD-----HLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 66 ~e~~~Ls~l~-----HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
+|..+|..+. |||||++++ ++.... .+|+||||.+++|.+++.. ....+++.+++.++.||+.||.|||+
T Consensus 80 ~e~~~l~~l~~~~~~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~ 155 (360)
T 3llt_A 80 IEADILKKIQNDDINNNNIVKYHG-KFMYYD---HMCLIFEPLGPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRK 155 (360)
T ss_dssp HHHHHHHHTCCCSTTGGGBCCEEE-EEEETT---EEEEEECCCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcccCCCCCCeecccc-eeeECC---eeEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 5666777665 999999999 554443 6899999999999999944 33459999999999999999999999
Q ss_pred cCceeccCCCCcEEEcc-------------------------CCceEEeccCcccCCCCCCcccccccccccccCCCCCC
Q 004998 140 QGIVVHNVRPSCFVMSS-------------------------FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPL 194 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~-------------------------~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~ 194 (720)
+||+||||||+|||++. ++.+||+|||++......
T Consensus 156 ~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~-------------------- 215 (360)
T 3llt_A 156 MSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY-------------------- 215 (360)
T ss_dssp TTEECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSC--------------------
T ss_pred CCeeeCCCCcccEEEccccccccccchhcccccccccccccCCCCEEEEeccCceecCCC--------------------
Confidence 99999999999999975 556666666555211000
Q ss_pred chhhHhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccC
Q 004998 195 PLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMET 274 (720)
Q Consensus 195 ~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT 274 (720)
.....||
T Consensus 216 -------------------------------------------------------------------------~~~~~gt 222 (360)
T 3llt_A 216 -------------------------------------------------------------------------HGSIINT 222 (360)
T ss_dssp -------------------------------------------------------------------------CCSCCSC
T ss_pred -------------------------------------------------------------------------CcCccCc
Confidence 0114689
Q ss_pred CcccCCccccCCCCCccccchhhhhhhhhccc---cCCCCchHHHHHHHhhc--CCCCcccc------------------
Q 004998 275 NWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRH--RVLPPQLL------------------ 331 (720)
Q Consensus 275 ~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~--~~~p~~~~------------------ 331 (720)
+.|+|||++.+..++.++|||||||++|||++ ||........ ...+.. ..+|+...
T Consensus 223 ~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 301 (360)
T 3llt_A 223 RQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEH-LAMMESIIQPIPKNMLYEATKTNGSKYVNKDELK 301 (360)
T ss_dssp GGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTE
T ss_pred ccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCCcHHHH-HHHHHHhcCCCCHHHHhhhhhccCccccCcccce
Confidence 99999999999999999999999999999999 7766543322 221111 11111100
Q ss_pred -------------------------ccCchHHHHHHHcCCCCCCCCCChHHHHcCcccC
Q 004998 332 -------------------------LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLN 365 (720)
Q Consensus 332 -------------------------~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~ 365 (720)
...+...+||.+||++||.+|||+.|+|+||||+
T Consensus 302 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpta~elL~hp~f~ 360 (360)
T 3llt_A 302 LAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPAELLKHKFLE 360 (360)
T ss_dssp ECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGC
T ss_pred ecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhcCChhhCCCHHHHhcCcccC
Confidence 0113344999999999999999999999999995
No 88
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=1.6e-34 Score=314.46 Aligned_cols=220 Identities=15% Similarity=0.158 Sum_probs=164.9
Q ss_pred eeeehhhhcccCCCCCceecccceeecC--CCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENE--AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~--~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+..+|..+|.+++||||+++++ ++... .....+|+||||.+++|.+++... .+++.+++.|+.||+.||.|||++
T Consensus 71 ~~~~E~~~l~~l~h~niv~~~~-~~~~~~~~~~~~~~iv~e~~~~~L~~~l~~~--~~~~~~~~~i~~qi~~aL~~LH~~ 147 (364)
T 3qyz_A 71 RTLREIKILLRFRHENIIGIND-IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ--HLSNDHICYFLYQILRGLKYIHSA 147 (364)
T ss_dssp HHHHHHHHHHHCCCTTBCCCCE-EECCSSTTTCCCEEEEEECCSEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcCCCCCcccee-EEecCCccccceEEEEEcccCcCHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHC
Confidence 4447888999999999999999 44332 233468999999778999999653 399999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004998 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+|||++.++.+||+|||.+....... +.
T Consensus 148 ~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~---------------------------------~~---------- 184 (364)
T 3qyz_A 148 NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH---------------------------------DH---------- 184 (364)
T ss_dssp TEECCCCCGGGEEECTTCCEEECCCTTCEECCGGG---------------------------------CB----------
T ss_pred CeecCCCChHhEEECCCCCEEEEeCcceEecCCCC---------------------------------Cc----------
Confidence 99999999999999999999999999884321110 00
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC-CCccccchhhhh
Q 004998 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGV 299 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGv 299 (720)
.......+||++|+|||++.+.. ++.++|||||||
T Consensus 185 --------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~ 220 (364)
T 3qyz_A 185 --------------------------------------------TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGC 220 (364)
T ss_dssp --------------------------------------------CCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHH
T ss_pred --------------------------------------------cccccccccccCCCCCHHhcCCCCCCcchhHHHHHH
Confidence 00001147899999999876544 899999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhc-CCCC---------------------------ccc-cccCchHHHHHHHcCCC
Q 004998 300 LLFELFC---PFSTGEEKTRTMSSLRH-RVLP---------------------------PQL-LLKFPKEASFCLWLLHP 347 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~-~~~p---------------------------~~~-~~~~p~~~~li~~~L~~ 347 (720)
++|||++ ||............+.. +..+ ..+ ....+...+||.+||.+
T Consensus 221 il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~ 300 (364)
T 3qyz_A 221 ILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTF 300 (364)
T ss_dssp HHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCS
T ss_pred HHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCC
Confidence 9999999 67655433222111110 0000 001 12234456999999999
Q ss_pred CCCCCCChHHHHcCcccCCCccchH
Q 004998 348 EPSGRPKMGELLQSEFLNEPRDSME 372 (720)
Q Consensus 348 dP~~Rpta~eiL~hp~~~~~~~~l~ 372 (720)
||.+|||+.|+|+||||+....+..
T Consensus 301 dP~~R~t~~e~l~hp~~~~~~~~~~ 325 (364)
T 3qyz_A 301 NPHKRIEVEQALAHPYLEQYYDPSD 325 (364)
T ss_dssp STTTSCCHHHHHTSGGGTTTCCGGG
T ss_pred ChhhCCCHHHHhcCcchhhccCccc
Confidence 9999999999999999998755443
No 89
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=7.9e-34 Score=299.24 Aligned_cols=213 Identities=18% Similarity=0.252 Sum_probs=164.3
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..++.+++||||+++++ ++..+. .+|+||||.+++|.+++... ...+++..++.++.||+.||.|||++||
T Consensus 49 ~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i 124 (299)
T 2r3i_A 49 AIREISLLKELNHPNIVKLLD-VIHTEN---KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 124 (299)
T ss_dssp HHHHHHHHTTCCCTTBCCEEE-EEEETT---EEEEEEECCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHcCCCCeeeEEE-EEecCC---ceEEEEEcccCCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 347888999999999999999 554443 58999999668999999443 3458999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.+||+|||.+...+....
T Consensus 125 ~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~---------------------------------------------- 158 (299)
T 2r3i_A 125 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR---------------------------------------------- 158 (299)
T ss_dssp CCCCCCGGGEEECTTSCEEECSTTHHHHHCCCSB----------------------------------------------
T ss_pred cCCCCCHHHeEEcCCCCEEECcchhhhhccCCcc----------------------------------------------
Confidence 9999999999999999999999988733211100
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC-CCccccchhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLL 301 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGvll 301 (720)
......||+.|+|||++.+.. ++.++|||||||++
T Consensus 159 --------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l 194 (299)
T 2r3i_A 159 --------------------------------------------TYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIF 194 (299)
T ss_dssp --------------------------------------------CTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHH
T ss_pred --------------------------------------------ccCcccccccccCcHHhhccccCChHHHHHHHHHHH
Confidence 001136799999999998876 79999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCc---------------cc-----------cccC-chHHHHHHHcCCCCCCC
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRHRVLPP---------------QL-----------LLKF-PKEASFCLWLLHPEPSG 351 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~---------------~~-----------~~~~-p~~~~li~~~L~~dP~~ 351 (720)
|+|++ ||............+.....++ .+ .... +...+|+.+||++||++
T Consensus 195 ~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~ 274 (299)
T 2r3i_A 195 AEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNK 274 (299)
T ss_dssp HHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTT
T ss_pred HHHHhCCCCCCCccHHHHHHHHHHHhCCCchhhhhHhhcCcccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCccc
Confidence 99999 7776655433333222111110 00 0112 33459999999999999
Q ss_pred CCChHHHHcCcccCCCccc
Q 004998 352 RPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 352 Rpta~eiL~hp~~~~~~~~ 370 (720)
|||+.|+|+||||+....+
T Consensus 275 Rpt~~~~l~hp~~~~~~~~ 293 (299)
T 2r3i_A 275 RISAKAALAHPFFQDVTKP 293 (299)
T ss_dssp SCCHHHHHTSGGGTTCCCC
T ss_pred CCCHHHHhcChhhhcCCCC
Confidence 9999999999999987544
No 90
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.4e-34 Score=307.02 Aligned_cols=210 Identities=13% Similarity=0.165 Sum_probs=162.5
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.+|..++.+++||||+++++ ++.... .+++||||.+++|.+++......+++.+++.++.||+.||.|||++||+|
T Consensus 60 ~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH 135 (346)
T 1ua2_A 60 LREIKLLQELSHPNIIGLLD-AFGHKS---NISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILH 135 (346)
T ss_dssp HHHHHHHHHCCCTTBCCEEE-EECCTT---CCEEEEECCSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHhhCCCCCCCeEEE-EEeeCC---ceEEEEEcCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCEEC
Confidence 37888999999999999999 554443 57999999667999999766667999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+|||++.++.+||+|||++...+....
T Consensus 136 ~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~------------------------------------------------ 167 (346)
T 1ua2_A 136 RDLKPNNLLLDENGVLKLADFGLAKSFGSPNR------------------------------------------------ 167 (346)
T ss_dssp CCCCGGGEEECTTCCEEECCCGGGSTTTSCCC------------------------------------------------
T ss_pred CCCCHHHEEEcCCCCEEEEecccceeccCCcc------------------------------------------------
Confidence 99999999999999999999988754321100
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC-CCccccchhhhhhhhh
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFE 303 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGvll~e 303 (720)
......||++|+|||++.+.. ++.++|||||||++||
T Consensus 168 ------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~e 205 (346)
T 1ua2_A 168 ------------------------------------------AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAE 205 (346)
T ss_dssp ------------------------------------------CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHH
T ss_pred ------------------------------------------cCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHH
Confidence 001146899999999997654 8999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhc-CCCCcc------------------------ccccC-chHHHHHHHcCCCCCCCCCC
Q 004998 304 LFC---PFSTGEEKTRTMSSLRH-RVLPPQ------------------------LLLKF-PKEASFCLWLLHPEPSGRPK 354 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~-~~~p~~------------------------~~~~~-p~~~~li~~~L~~dP~~Rpt 354 (720)
|++ ||............+.. +..++. ..... +...+||.+||+.||.+|||
T Consensus 206 ll~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt 285 (346)
T 1ua2_A 206 LLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARIT 285 (346)
T ss_dssp HHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCC
T ss_pred HHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCC
Confidence 999 45554443322222221 111000 00122 34559999999999999999
Q ss_pred hHHHHcCcccCCCc
Q 004998 355 MGELLQSEFLNEPR 368 (720)
Q Consensus 355 a~eiL~hp~~~~~~ 368 (720)
+.|+|+||||....
T Consensus 286 ~~ell~h~~f~~~~ 299 (346)
T 1ua2_A 286 ATQALKMKYFSNRP 299 (346)
T ss_dssp HHHHHTSGGGTSSS
T ss_pred HHHHhcChhhhcCC
Confidence 99999999998753
No 91
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=1.7e-34 Score=307.05 Aligned_cols=216 Identities=18% Similarity=0.289 Sum_probs=166.8
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++.+++||||+++++.+..........|+|||| .|++|.+++...+ .+++.+++.++.||+.||.|||++|
T Consensus 58 ~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~ 136 (311)
T 3ork_A 58 RFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG-PMTPKRAIEVIADACQALNFSHQNG 136 (311)
T ss_dssp HHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEEEEEEECCCEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCCCCcceEEEeeeccCCCCcccEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 4457888999999999999999444444333356999999 7899999995443 4999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||++.........
T Consensus 137 ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~-------------------------------------------- 172 (311)
T 3ork_A 137 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNS-------------------------------------------- 172 (311)
T ss_dssp CCCCCCCGGGEEEETTSCEEECCCSCC-----------------------------------------------------
T ss_pred CCcCCCCHHHEEEcCCCCEEEeeccCcccccccccc--------------------------------------------
Confidence 999999999999999999999999987433211000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
........||+.|+|||++.+..++.++|||||||++
T Consensus 173 -------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l 209 (311)
T 3ork_A 173 -------------------------------------------VTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVL 209 (311)
T ss_dssp ----------------------------------------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHH
T ss_pred -------------------------------------------cccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHH
Confidence 0000114689999999999999999999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccc-cccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCC
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQL-LLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNE 366 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~-~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~ 366 (720)
|||++ ||............+.....++.. ...++ ...+||.+||+.||.+||++.++|.|+|+..
T Consensus 210 ~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~ 279 (311)
T 3ork_A 210 YEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRV 279 (311)
T ss_dssp HHHHHSSCSCCCSSHHHHHHHHHHCCCCCHHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred HHHHhCCCCCCCCChHHHHHHHhcCCCCCcccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHH
Confidence 99999 787766655555555555444432 23344 4459999999999999999999999999764
No 92
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=4.1e-34 Score=317.50 Aligned_cols=208 Identities=21% Similarity=0.246 Sum_probs=157.6
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++|||||++++ ++..+ .+|+|||| .+++|.+++... ..+++.+++.++.||+.||.|||++|
T Consensus 186 ~~~~E~~~l~~l~hpniv~l~~-~~~~~----~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~ 259 (419)
T 3i6u_A 186 NVETEIEILKKLNHPCIIKIKN-FFDAE----DYYIVLELMEGGELFDKVVGN-KRLKEATCKLYFYQMLLAVQYLHENG 259 (419)
T ss_dssp CHHHHHHHHHHCCCTTBCCCCE-EEESS----EEEEEEECCTTCBGGGGTSSS-CCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCEeeEEE-EEecC----ceEEEEEcCCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3447888999999999999999 55443 47999999 899999998544 45999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCC---ceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCC
Q 004998 142 IVVHNVRPSCFVMSSFN---HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~---~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
|+||||||+|||++.++ .+||+|||++...+...
T Consensus 260 ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~~~~~~~------------------------------------------- 296 (419)
T 3i6u_A 260 IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS------------------------------------------- 296 (419)
T ss_dssp CCCSCCCGGGEEESSSSSSCCEEECCSSTTTSCC----------------------------------------------
T ss_pred ccccCCChHhEEEecCCCcceEEEeecccceecCCCc-------------------------------------------
Confidence 99999999999997544 49999888874432110
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC---CCCCccccch
Q 004998 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG---APVSCASDIY 295 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~---~~~s~~sDIw 295 (720)
.....+||+.|+|||++.+ ..++.++|||
T Consensus 297 ------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Diw 328 (419)
T 3i6u_A 297 ------------------------------------------------LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCW 328 (419)
T ss_dssp --------------------------------------------------------CTTCCTTTTC----CTTHHHHHHH
T ss_pred ------------------------------------------------cccccCCCCCccCceeeecCCCCCCCchhhhH
Confidence 0011468999999999864 4588999999
Q ss_pred hhhhhhhhccc---cCCCCchHHHHHHHhhcCC--CCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 296 RLGVLLFELFC---PFSTGEEKTRTMSSLRHRV--LPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 296 SLGvll~eLlt---pf~~~~~~~~~~~~l~~~~--~p~~~~~~~-p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
||||++|+|++ ||............+..+. +++...... +...+||.+||++||.+|||+.|+|+||||+..
T Consensus 329 slG~il~~lltg~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~~ 406 (419)
T 3i6u_A 329 SLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDE 406 (419)
T ss_dssp HHHHHHHHHHHSSCSSCCCSSSCCHHHHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGCCH
T ss_pred hHHHHHHHHHHCCCCCCCCcchHHHHHHHhcCCCCCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhCCcccCCh
Confidence 99999999999 6655433222333333332 223333333 444599999999999999999999999999874
No 93
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=1.8e-34 Score=302.51 Aligned_cols=207 Identities=19% Similarity=0.217 Sum_probs=154.8
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhC---CCCCCCHHHHHHHHHHHHHHHHHHHHc-C
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHSQ-G 141 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~---~~~~l~~~~~~~i~~QIl~aL~yLHs~-g 141 (720)
.+...+..++||||+++++ ++.++. .+|+||||.+++|.+++.. ....+++..++.++.||+.||.|||++ |
T Consensus 55 ~~~~~~~~~~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~ 130 (290)
T 3fme_A 55 DLDISMRTVDCPFTVTFYG-ALFREG---DVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS 130 (290)
T ss_dssp HHHHHHTTCCCTTBCCEEE-EEECSS---SEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHhCCCCeEEEEee-eeeccC---CEEEEEehhccchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCC
Confidence 3444578899999999999 554443 5799999966799888732 455699999999999999999999998 9
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++.+||+|||.+.......
T Consensus 131 i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~---------------------------------------------- 164 (290)
T 3fme_A 131 VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDV---------------------------------------------- 164 (290)
T ss_dssp CCCCCCSGGGCEECTTCCEEBCCC--------------------------------------------------------
T ss_pred eecCCCCHHHEEECCCCCEEEeecCCcccccccc----------------------------------------------
Confidence 9999999999999999999999988874321110
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccc----cCCCCCccccchhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEEL----AGAPVSCASDIYRL 297 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l----~~~~~s~~sDIwSL 297 (720)
......||+.|+|||++ .+..++.++|||||
T Consensus 165 ---------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~sl 199 (290)
T 3fme_A 165 ---------------------------------------------AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSL 199 (290)
T ss_dssp --------------------------------------------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHH
T ss_pred ---------------------------------------------cccccCCCccccChhhcChhhcCcCCCcHHHHHHH
Confidence 00013589999999996 45558999999999
Q ss_pred hhhhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 298 GVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 298 Gvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
||++|+|++ ||..................+......++ ...+|+.+||++||.+|||+.|+++||||+..
T Consensus 200 G~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~hp~f~~~ 273 (290)
T 3fme_A 200 GITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLH 273 (290)
T ss_dssp HHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHH
T ss_pred HHHHHHHHHCCCCccccCchHHHHHHHhccCCCCcccccCCHHHHHHHHHHhhcChhhCcCHHHHHhCcccccC
Confidence 999999999 77654443333433333333333333344 45599999999999999999999999999864
No 94
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=2.9e-34 Score=313.40 Aligned_cols=213 Identities=20% Similarity=0.241 Sum_probs=158.4
Q ss_pred eeeehhhhcccCCCCCceecccceeecCC---CCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEA---AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~---~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
+..+|..++..++||||+++++ ++.... ....+|+||||.+++|.+++.. .+++..+..++.||+.||.|||+
T Consensus 70 ~~~~E~~~l~~l~hpniv~~~~-~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~---~~~~~~~~~i~~qi~~al~~lH~ 145 (371)
T 2xrw_A 70 RAYRELVLMKCVNHKNIIGLLN-VFTPQKSLEEFQDVYIVMELMDANLCQVIQM---ELDHERMSYLLYQMLCGIKHLHS 145 (371)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EECSCCSTTTCCEEEEEEECCSEEHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCccceEE-eeccccccccccceEEEEEcCCCCHHHHHhh---ccCHHHHHHHHHHHHHHHHHHHH
Confidence 3447888999999999999999 444332 2336899999977799999853 38999999999999999999999
Q ss_pred cCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004998 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||+||||||+|||++.++.+||+|||++...+...
T Consensus 146 ~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~-------------------------------------------- 181 (371)
T 2xrw_A 146 AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF-------------------------------------------- 181 (371)
T ss_dssp TTCCCSCCCGGGEEECTTSCEEECCCCC----------------------------------------------------
T ss_pred CCeecccCCHHHEEEcCCCCEEEEEeeccccccccc--------------------------------------------
Confidence 999999999999999999999999998874321110
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhh
Q 004998 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
......||+.|+|||++.+..++.++|||||||
T Consensus 182 -----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~ 214 (371)
T 2xrw_A 182 -----------------------------------------------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 214 (371)
T ss_dssp -------------------------------------------------------CTTCCHHHHTTCCCCTTHHHHHHHH
T ss_pred -----------------------------------------------ccCCceecCCccCHHHhcCCCCCchHhHHHHHH
Confidence 001146899999999999988999999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhcCCCC-cccc-------------------------------c--------cCch
Q 004998 300 LLFELFC---PFSTGEEKTRTMSSLRHRVLP-PQLL-------------------------------L--------KFPK 336 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~~~~p-~~~~-------------------------------~--------~~p~ 336 (720)
++|||++ ||............+.....| +.+. + ..+.
T Consensus 215 il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (371)
T 2xrw_A 215 IMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQ 294 (371)
T ss_dssp HHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHH
T ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHH
Confidence 9999999 777655443322222211110 0000 0 0123
Q ss_pred HHHHHHHcCCCCCCCCCChHHHHcCcccCCCccc
Q 004998 337 EASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 337 ~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
..+||.+||.+||.+|||+.|+|+||||+...++
T Consensus 295 ~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~~~~ 328 (371)
T 2xrw_A 295 ARDLLSKMLVIDASKRISVDEALQHPYINVWYDP 328 (371)
T ss_dssp HHHHHHHHSCSSGGGSCCHHHHHHSHHHHTTCCH
T ss_pred HHHHHHHHCcCChhhCCCHHHHhCCcchhhhcCc
Confidence 4599999999999999999999999999876543
No 95
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=1.8e-34 Score=315.06 Aligned_cols=213 Identities=17% Similarity=0.254 Sum_probs=162.9
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCC---CCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAA---IDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~---~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
+..+|..++..++||||+++++ ++..... ...+|+||||.+++|.+++.. .+++..++.++.||+.||.|||+
T Consensus 87 ~~~~E~~~l~~l~h~niv~~~~-~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~---~~~~~~~~~i~~qi~~aL~~LH~ 162 (371)
T 4exu_A 87 RAYRELLLLKHMQHENVIGLLD-VFTPASSLRNFYDFYLVMPFMQTDLQKIMGM---EFSEEKIQYLVYQMLKGLKYIHS 162 (371)
T ss_dssp HHHHHHHHHHHCCCTTBCCCSE-EECSCSSSTTCCCCEEEEECCCEEHHHHTTS---CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCchhhhh-heeccCCcccceeEEEEEccccccHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHH
Confidence 4447888999999999999999 5544332 223599999977899998833 39999999999999999999999
Q ss_pred cCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004998 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||+||||||+|||++.++.+||+|||.+...+..
T Consensus 163 ~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~--------------------------------------------- 197 (371)
T 4exu_A 163 AGVVHRDLKPGNLAVNEDCELKILDFGLARHADAE--------------------------------------------- 197 (371)
T ss_dssp TTCCCSCCCGGGEEECTTCCEEECSTTCC---------------------------------------------------
T ss_pred CCCcCCCcCHHHeEECCCCCEEEEecCcccccccC---------------------------------------------
Confidence 99999999999999999999999999887432110
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-CCCCccccchhhh
Q 004998 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLG 298 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sDIwSLG 298 (720)
.....||++|+|||++.+ ..++.++||||||
T Consensus 198 ------------------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG 229 (371)
T 4exu_A 198 ------------------------------------------------MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVG 229 (371)
T ss_dssp --------------------------------------------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHH
T ss_pred ------------------------------------------------cCCcccCccccCHHHhcCCCCCCcHHhHHHHH
Confidence 011467999999999987 5689999999999
Q ss_pred hhhhhccc---cCCCCchHHHHHHHhhcCCCC-cc----------------------------ccccCchHHHHHHHcCC
Q 004998 299 VLLFELFC---PFSTGEEKTRTMSSLRHRVLP-PQ----------------------------LLLKFPKEASFCLWLLH 346 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~~p-~~----------------------------~~~~~p~~~~li~~~L~ 346 (720)
|++|+|++ ||............+.....+ .. +....+...+||.+||+
T Consensus 230 ~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~ 309 (371)
T 4exu_A 230 CIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLE 309 (371)
T ss_dssp HHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSC
T ss_pred HHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCC
Confidence 99999999 776654433322222211111 00 11123455699999999
Q ss_pred CCCCCCCChHHHHcCcccCCCccchH
Q 004998 347 PEPSGRPKMGELLQSEFLNEPRDSME 372 (720)
Q Consensus 347 ~dP~~Rpta~eiL~hp~~~~~~~~l~ 372 (720)
+||.+|||+.|+|+||||+....+..
T Consensus 310 ~dP~~Rpt~~ell~hp~f~~~~~~~~ 335 (371)
T 4exu_A 310 LDVDKRLTAAQALTHPFFEPFRDPEE 335 (371)
T ss_dssp SCTTTSCCHHHHHTSGGGTTTCCGGG
T ss_pred CChhhcCCHHHHhcCcccccCCCccc
Confidence 99999999999999999998755443
No 96
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=1.4e-33 Score=294.29 Aligned_cols=206 Identities=18% Similarity=0.266 Sum_probs=163.1
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..++.+++||||+++++ ++.+.. .+|+|||| .|++|.+++.... .+++.+++.++.||+.||.|||++||
T Consensus 53 ~~~E~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~~i~~~l~~lH~~~i 127 (277)
T 3f3z_A 53 FKQEIEIMKSLDHPNIIRLYE-TFEDNT---DIYLVMELCTGGELFERVVHKR-VFRESDAARIMKDVLSAVAYCHKLNV 127 (277)
T ss_dssp HHHHHHHHHTCCCTTBCCEEE-EEECSS---EEEEEEECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHhCCCCCEeeEEE-EEecCC---eEEEEEeccCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 346788999999999999999 555443 57999999 7899999995443 49999999999999999999999999
Q ss_pred eeccCCCCcEEE---ccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004998 143 VVHNVRPSCFVM---SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 143 vHrDLKP~NILl---~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||||||+||++ +.++.++|+|||.+.......
T Consensus 128 ~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~-------------------------------------------- 163 (277)
T 3f3z_A 128 AHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK-------------------------------------------- 163 (277)
T ss_dssp ECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTS--------------------------------------------
T ss_pred cCCCCCHHHEEEecCCCCCcEEEEecccceeccCcc--------------------------------------------
Confidence 999999999999 788899999988874321110
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhh
Q 004998 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
......||+.|+|||++.+. ++.++|||||||
T Consensus 164 -----------------------------------------------~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~ 195 (277)
T 3f3z_A 164 -----------------------------------------------MMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGV 195 (277)
T ss_dssp -----------------------------------------------CBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHH
T ss_pred -----------------------------------------------chhccCCCCCccChHHhccc-CCchhhehhHHH
Confidence 00113689999999999765 899999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhcCCC--Ccccc-ccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 300 LLFELFC---PFSTGEEKTRTMSSLRHRVL--PPQLL-LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~~~~--p~~~~-~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
++|||++ ||...... .....+..... +.... ...+...+|+.+||++||.+|||+.++|+||||+..
T Consensus 196 ~l~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~ 268 (277)
T 3f3z_A 196 MMYVLLCGYPPFSAPTDS-EVMLKIREGTFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEHEWFEKQ 268 (277)
T ss_dssp HHHHHHHSSCSSCCSSHH-HHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHHH
T ss_pred HHHHHHHCCCCCCCCCHH-HHHHHHHhCCCCCCchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhcc
Confidence 9999999 77665544 33333433322 22222 233455699999999999999999999999999764
No 97
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=5.3e-34 Score=314.69 Aligned_cols=211 Identities=17% Similarity=0.215 Sum_probs=154.9
Q ss_pred ehhhhc-ccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 66 SDGVEL-THGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 66 ~e~~~L-s~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
+|..++ ...+||||+++++.+.........+|+|||| .|++|.++|... ...+++.+++.|+.||+.||.|||++||
T Consensus 103 ~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i 182 (400)
T 1nxk_A 103 REVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 182 (400)
T ss_dssp HHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 455554 4468999999999433222223368999999 889999999654 3459999999999999999999999999
Q ss_pred eeccCCCCcEEEcc---CCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004998 143 VVHNVRPSCFVMSS---FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 143 vHrDLKP~NILl~~---~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||||||+|||++. ++.+||+|||+++......
T Consensus 183 vHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~-------------------------------------------- 218 (400)
T 1nxk_A 183 AHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN-------------------------------------------- 218 (400)
T ss_dssp ECCCCCGGGEEESSSSTTCCEEECCCTTCEECC-----------------------------------------------
T ss_pred cccCcCcceEEEecCCCCccEEEEecccccccCCCC--------------------------------------------
Confidence 99999999999997 7889999888874321100
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhh
Q 004998 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
.....+||+.|+|||++.+..|+.++|||||||
T Consensus 219 -----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~ 251 (400)
T 1nxk_A 219 -----------------------------------------------SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGV 251 (400)
T ss_dssp -------------------------------------------------------CTTCCGGGSCCCCSSSHHHHHHHHH
T ss_pred -----------------------------------------------ccccCCCCCCccCHhhcCCCCCCCcccHHHHHH
Confidence 001147899999999999888999999999999
Q ss_pred hhhhccc---cCCCCchHH---HHHHHhhcC--CCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 300 LLFELFC---PFSTGEEKT---RTMSSLRHR--VLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~---~~~~~l~~~--~~p~~~~~~~-p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
++|||++ ||....... .....+..+ .++......+ +...+||.+||+.||.+|||+.|+|+||||...
T Consensus 252 il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~~ 328 (400)
T 1nxk_A 252 IMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 328 (400)
T ss_dssp HHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHTT
T ss_pred HHHHHHhCCCCCCCCccccccHHHHHHHHcCcccCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCccccCC
Confidence 9999999 665432210 112222222 2232222333 445599999999999999999999999999865
No 98
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=1.3e-33 Score=311.06 Aligned_cols=214 Identities=17% Similarity=0.179 Sum_probs=161.7
Q ss_pred eehhhhcccCCCCCceecccceeecCC--CCCcEEEEEecCCCCHHHHHh---CCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEA--AIDPFVHAIEWGDVSLRQWLD---KPKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~--~~~~~~lv~E~~ggsL~~~L~---~~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
.+|..+|..++|||||++++.++.... ....+++||||.+++|.+.+. .....+++..++.++.||+.||.|||+
T Consensus 80 ~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~ 159 (394)
T 4e7w_A 80 NRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHS 159 (394)
T ss_dssp CHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 368889999999999999995544332 223478999996667666552 234559999999999999999999999
Q ss_pred cCceeccCCCCcEEEc-cCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCC
Q 004998 140 QGIVVHNVRPSCFVMS-SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~-~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
+||+||||||+|||++ .++.+||+|||+++......
T Consensus 160 ~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~~~------------------------------------------- 196 (394)
T 4e7w_A 160 IGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGE------------------------------------------- 196 (394)
T ss_dssp TTEECSCCSGGGEEEETTTTEEEECCCTTCEECCTTC-------------------------------------------
T ss_pred CCccCCCCCHHHEEEcCCCCcEEEeeCCCcccccCCC-------------------------------------------
Confidence 9999999999999999 78999999998874321110
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC-CCccccchhh
Q 004998 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRL 297 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSL 297 (720)
......||++|+|||++.+.. ++.++|||||
T Consensus 197 ------------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSl 228 (394)
T 4e7w_A 197 ------------------------------------------------PNVSYICSRYYRAPELIFGATNYTTNIDIWST 228 (394)
T ss_dssp ------------------------------------------------CCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHH
T ss_pred ------------------------------------------------CCcccccCcCccCHHHHcCCCCCCcHHHHHHH
Confidence 001146899999999997764 8999999999
Q ss_pred hhhhhhccc---cCCCCchHHHHHHHhhc------------------CCCCc--------cccc-cCchHHHHHHHcCCC
Q 004998 298 GVLLFELFC---PFSTGEEKTRTMSSLRH------------------RVLPP--------QLLL-KFPKEASFCLWLLHP 347 (720)
Q Consensus 298 Gvll~eLlt---pf~~~~~~~~~~~~l~~------------------~~~p~--------~~~~-~~p~~~~li~~~L~~ 347 (720)
||++|||++ ||.+..........+.. ..+|. .+.. ..+...+||.+||++
T Consensus 229 G~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~ 308 (394)
T 4e7w_A 229 GCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEY 308 (394)
T ss_dssp HHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCS
T ss_pred HHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCC
Confidence 999999999 77766544333322221 00110 0111 223455999999999
Q ss_pred CCCCCCChHHHHcCcccCCCcc
Q 004998 348 EPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 348 dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
||.+|||+.|+|+||||+....
T Consensus 309 dP~~R~t~~e~l~hp~f~~~~~ 330 (394)
T 4e7w_A 309 TPSARLTAIEALCHPFFDELRT 330 (394)
T ss_dssp SGGGSCCHHHHHTSGGGSTTTS
T ss_pred ChhhCCCHHHHhcChhhhhhcc
Confidence 9999999999999999998644
No 99
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=7.3e-34 Score=302.14 Aligned_cols=217 Identities=16% Similarity=0.199 Sum_probs=157.9
Q ss_pred eeeehhhhccc-CCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004998 63 RKHSDGVELTH-GDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~Ls~-l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+..+|..+|.+ ++||||+++++ ++.+.. .+|+|||| .|++|.+++.... .+++.+++.++.||+.||.|||++
T Consensus 56 ~~~~E~~~l~~~~~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~ 130 (316)
T 2ac3_A 56 RVFREVEMLYQCQGHRNVLELIE-FFEEED---RFYLVFEKMRGGSILSHIHKRR-HFNELEASVVVQDVASALDFLHNK 130 (316)
T ss_dssp HHHHHHHHHHHTCCCTTBCCEEE-EEEETT---EEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhcCCCCeeeEEE-EEeeCC---EEEEEEEcCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHhC
Confidence 34467778877 57999999999 555443 68999999 7899999995543 499999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCc---eEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCC
Q 004998 141 GIVVHNVRPSCFVMSSFNH---VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~---vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~ 217 (720)
||+||||||+|||++.++. +||+|||++.......... ..
T Consensus 131 ~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~------------------------------~~------- 173 (316)
T 2ac3_A 131 GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCS------------------------------PI------- 173 (316)
T ss_dssp TCCCCCCCGGGEEESCSSSSCSEEECCTTCCC------------------------------------------------
T ss_pred CceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCccc------------------------------cc-------
Confidence 9999999999999997776 9999998874321110000 00
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-----CCCCccc
Q 004998 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-----APVSCAS 292 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-----~~~s~~s 292 (720)
.........||+.|+|||++.+ ..++.++
T Consensus 174 ----------------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~ 207 (316)
T 2ac3_A 174 ----------------------------------------------STPELLTPCGSAEYMAPEVVEAFSEEASIYDKRC 207 (316)
T ss_dssp ------------------------------------------------------CCSGGGCCHHHHHHTSHHHHHHTTTH
T ss_pred ----------------------------------------------cccccccccCCcCccChHHhhcccccccCCCccc
Confidence 0000011468999999999975 4489999
Q ss_pred cchhhhhhhhhccc---cCCCCch--------------HHHHHHHhhcCC--CCccccccC-chHHHHHHHcCCCCCCCC
Q 004998 293 DIYRLGVLLFELFC---PFSTGEE--------------KTRTMSSLRHRV--LPPQLLLKF-PKEASFCLWLLHPEPSGR 352 (720)
Q Consensus 293 DIwSLGvll~eLlt---pf~~~~~--------------~~~~~~~l~~~~--~p~~~~~~~-p~~~~li~~~L~~dP~~R 352 (720)
|||||||++|||++ ||..... .......+.... +|....... +...+||.+||++||.+|
T Consensus 208 DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R 287 (316)
T 2ac3_A 208 DLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQR 287 (316)
T ss_dssp HHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTS
T ss_pred ccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHHHHHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhC
Confidence 99999999999999 6654321 122333343332 222222233 345599999999999999
Q ss_pred CChHHHHcCcccCCC
Q 004998 353 PKMGELLQSEFLNEP 367 (720)
Q Consensus 353 pta~eiL~hp~~~~~ 367 (720)
||+.|+|+||||+..
T Consensus 288 ps~~e~l~hp~~~~~ 302 (316)
T 2ac3_A 288 LSAAQVLQHPWVQGC 302 (316)
T ss_dssp CCHHHHHHSTTCC--
T ss_pred CCHHHHhcChhhcCC
Confidence 999999999999975
No 100
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=6.1e-34 Score=305.27 Aligned_cols=208 Identities=19% Similarity=0.286 Sum_probs=161.8
Q ss_pred eeehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004998 64 KHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 64 ~~~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
..+|..++..+ .||||+++++ ++.... .+|+|||| .|++|.+++.. ....+++.+++.++.||+.||.|||++
T Consensus 75 ~~~e~~~l~~l~~~~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~ 150 (327)
T 3lm5_A 75 ILHEIAVLELAKSCPRVINLHE-VYENTS---EIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQN 150 (327)
T ss_dssp HHHHHHHHHHTTTCTTBCCEEE-EEECSS---EEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhccCCCCEEEEEE-EEEeCC---eEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 34677778777 5699999999 555443 57999999 88999999843 345699999999999999999999999
Q ss_pred CceeccCCCCcEEEcc---CCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCC
Q 004998 141 GIVVHNVRPSCFVMSS---FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 141 gIvHrDLKP~NILl~~---~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~ 217 (720)
||+||||||+|||++. ++.+||+|||++...+...
T Consensus 151 givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~------------------------------------------ 188 (327)
T 3lm5_A 151 NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHAC------------------------------------------ 188 (327)
T ss_dssp TEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC----------------------------------------------
T ss_pred CeecCcCChHHEEEecCCCCCcEEEeeCccccccCCcc------------------------------------------
Confidence 9999999999999987 7899999888874321110
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhh
Q 004998 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRL 297 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSL 297 (720)
......||+.|+|||++.+..++.++|||||
T Consensus 189 -------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Diwsl 219 (327)
T 3lm5_A 189 -------------------------------------------------ELREIMGTPEYLAPEILNYDPITTATDMWNI 219 (327)
T ss_dssp ------------------------------------------------------CCCGGGCCHHHHTTCCCCTHHHHHHH
T ss_pred -------------------------------------------------ccccccCCcCccCCeeecCCCCCchhhHHHH
Confidence 0011468999999999999999999999999
Q ss_pred hhhhhhccc---cCCCCchHHHHHHHhhc--CCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 298 GVLLFELFC---PFSTGEEKTRTMSSLRH--RVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 298 Gvll~eLlt---pf~~~~~~~~~~~~l~~--~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
||++|||++ ||......... ..+.. ...++.....++ ...+||.+||++||.+|||++++|+||||+..
T Consensus 220 G~il~~ll~g~~pf~~~~~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h~~~~~~ 294 (327)
T 3lm5_A 220 GIIAYMLLTHTSPFVGEDNQETY-LNISQVNVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWLQQW 294 (327)
T ss_dssp HHHHHHHHHSSCSSCCSSHHHHH-HHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTCGGGCCC
T ss_pred HHHHHHHHhCCCCCCCCCchHHH-HHHHhcccccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCCHhhccc
Confidence 999999999 77665544332 22222 222333333344 44599999999999999999999999999876
No 101
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=3.7e-34 Score=335.92 Aligned_cols=204 Identities=16% Similarity=0.237 Sum_probs=164.1
Q ss_pred ehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 66 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.|..+|..+ +||||+++++ ++++.. .+|+|||| .|++|.++|.+.+ .+++..++.|+.||+.||.|||++|||
T Consensus 390 ~E~~~l~~~~~~~~i~~l~~-~~~~~~---~~~lV~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~gIi 464 (674)
T 3pfq_A 390 VEKRVLALPGKPPFLTQLHS-CFQTMD---RLYFVMEYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIAIGLFFLQSKGII 464 (674)
T ss_dssp HHHHHHTCTTCCTTBCCEEE-ECBCSS---EEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTSEE
T ss_pred HHHHHHHhccCCCeEEEEEE-EEEeCC---EEEEEEeCcCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeE
Confidence 566677775 7999999999 555543 68999999 8999999996544 499999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+||||+.++++||+|||+++......
T Consensus 465 HrDLKp~NILl~~~g~ikL~DFGla~~~~~~~------------------------------------------------ 496 (674)
T 3pfq_A 465 YRDLKLDNVMLDSEGHIKIADFGMCKENIWDG------------------------------------------------ 496 (674)
T ss_dssp CCCCCSTTEEECSSSCEEECCCTTCEECCCTT------------------------------------------------
T ss_pred eccCChhhEEEcCCCcEEEeecceeeccccCC------------------------------------------------
Confidence 99999999999999999999998874311100
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......+||+.|+|||++.+..|+.++|||||||+|||
T Consensus 497 ------------------------------------------~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilye 534 (674)
T 3pfq_A 497 ------------------------------------------VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYE 534 (674)
T ss_dssp ------------------------------------------CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHH
T ss_pred ------------------------------------------cccccccCCCcccCHhhhcCCCCCccceEechHHHHHH
Confidence 00012579999999999999999999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCCh-----HHHHcCcccCCC
Q 004998 304 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKM-----GELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rpta-----~eiL~hp~~~~~ 367 (720)
|++ ||...... ..+..+....+. ++..+ +...+||.+||++||.+||++ +||++||||+..
T Consensus 535 lltG~~Pf~~~~~~-~~~~~i~~~~~~--~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h~ff~~i 604 (674)
T 3pfq_A 535 MLAGQAPFEGEDED-ELFQSIMEHNVA--YPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYI 604 (674)
T ss_dssp HHHSSCSSCCSSHH-HHHHHHHSSCCC--CCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSSGGGSSC
T ss_pred HHcCCCCCCCCCHH-HHHHHHHhCCCC--CCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcCccccCC
Confidence 999 77766554 444444433221 22233 445599999999999999997 999999999986
No 102
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=3.1e-34 Score=328.31 Aligned_cols=206 Identities=15% Similarity=0.223 Sum_probs=164.7
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~-~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
.+|..+|.+++|||||++++ ++.+.. .+|+|||| .|++|.+++...+ ..+++..++.|+.||+.||.|||++||
T Consensus 232 ~~E~~iL~~l~hp~Iv~l~~-~~~~~~---~l~lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gI 307 (576)
T 2acx_A 232 LNEKQILEKVNSRFVVSLAY-AYETKD---ALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERI 307 (576)
T ss_dssp HHHHHHHHHCCCTTBCCEEE-EEECSS---EEEEEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHcCCCCEeeEEE-EEeeCC---EEEEEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence 36778999999999999999 555543 68999999 8999999995543 349999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
|||||||+|||++.+|++||+|||++.......
T Consensus 308 vHrDLKPeNILld~~g~vKL~DFGla~~~~~~~----------------------------------------------- 340 (576)
T 2acx_A 308 VYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ----------------------------------------------- 340 (576)
T ss_dssp ECCCCCGGGEEECTTSCEEECCCTTCEECCTTC-----------------------------------------------
T ss_pred eccCCchheEEEeCCCCeEEEecccceecccCc-----------------------------------------------
Confidence 999999999999999999999998874321100
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
.....+||+.|+|||++.+..|+.++|||||||++|
T Consensus 341 --------------------------------------------~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvily 376 (576)
T 2acx_A 341 --------------------------------------------TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLY 376 (576)
T ss_dssp --------------------------------------------CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHH
T ss_pred --------------------------------------------cccccCCCccccCHHHHcCCCCCccchHHHHHHHHH
Confidence 001147899999999999988999999999999999
Q ss_pred hccc---cCCCCc---hHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCC
Q 004998 303 ELFC---PFSTGE---EKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 367 (720)
Q Consensus 303 eLlt---pf~~~~---~~~~~~~~l~~~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~ 367 (720)
||++ ||.... ........+... +..++..+ +...+||.+||++||.+|| ++.|+++||||+..
T Consensus 377 eLltG~~PF~~~~~~~~~~~i~~~i~~~--~~~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~HpfF~~i 451 (576)
T 2acx_A 377 EMIAGQSPFQQRKKKIKREEVERLVKEV--PEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKL 451 (576)
T ss_dssp HHHHSSCSSSCSSSCCCHHHHHHHHHHC--CCCCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTSGGGTTC
T ss_pred HHHhCCCCCcccccchhHHHHHHHhhcc--cccCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhChhhccC
Confidence 9999 676542 122333333322 22233333 4445999999999999999 78999999999985
No 103
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=7.8e-34 Score=299.72 Aligned_cols=212 Identities=17% Similarity=0.227 Sum_probs=163.4
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..++..++||||+++++ ++.... .+++|||| .+++|.+++......+++..++.++.||+.||.|||++||
T Consensus 63 ~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i 138 (302)
T 2j7t_A 63 YIVEIEILATCDHPYIVKLLG-AYYHDG---KLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRI 138 (302)
T ss_dssp HHHHHHHHHHCCCTTBCCEEE-EEECC----CEEEEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhcCCCCCEeeeee-eeeeCC---eEEEEEEeCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcCCc
Confidence 346778899999999999999 554443 67999999 8999999996545569999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.+||+|||++..... ..
T Consensus 139 ~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~-----------------------------------~~------------ 171 (302)
T 2j7t_A 139 IHRDLKAGNVLMTLEGDIRLADFGVSAKNLK-----------------------------------TL------------ 171 (302)
T ss_dssp CCCCCSGGGEEECTTSCEEECCCHHHHHHHH-----------------------------------HH------------
T ss_pred ccCCCCHHHEEECCCCCEEEEECCCCccccc-----------------------------------cc------------
Confidence 9999999999999999999998887621000 00
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCcccc-----CCCCCccccchhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-----GAPVSCASDIYRL 297 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~-----~~~~s~~sDIwSL 297 (720)
. ......||+.|+|||++. +..++.++|||||
T Consensus 172 ------------------------------------~-------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~sl 208 (302)
T 2j7t_A 172 ------------------------------------Q-------KRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSL 208 (302)
T ss_dssp ------------------------------------H-------C-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHH
T ss_pred ------------------------------------c-------ccccccCChhhcCCeeeccccCCCCCCchhhhHHHH
Confidence 0 001146899999999983 5668999999999
Q ss_pred hhhhhhccc---cCCCCchHHHHHHHhhcCCCCc-cccccCch-HHHHHHHcCCCCCCCCCChHHHHcCcccCCCccc
Q 004998 298 GVLLFELFC---PFSTGEEKTRTMSSLRHRVLPP-QLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 298 Gvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~-~~~~~~p~-~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
||++|+|++ ||.......... .+.....+. .....++. ..+|+.+||+.||.+|||+.++++||||......
T Consensus 209 G~il~~l~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~~~ 285 (302)
T 2j7t_A 209 GITLIEMAQIEPPHHELNPMRVLL-KIAKSDPPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFVSSITSN 285 (302)
T ss_dssp HHHHHHHHHSSCTTTTSCHHHHHH-HHHHSCCCCCSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTSTTTTTCCCC
T ss_pred HHHHHHHhcCCCCCccCCHHHHHH-HHhccCCcccCCccccCHHHHHHHHHHcccChhhCCCHHHHhcChHHhhhccc
Confidence 999999999 666554443333 333332222 22334444 4599999999999999999999999999987554
No 104
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=2.5e-33 Score=318.52 Aligned_cols=207 Identities=18% Similarity=0.248 Sum_probs=164.9
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..+|.+++|||||++++ ++.+.. .+|+|||| .|++|.+++.... .+++..++.++.||+.||.|||++||+
T Consensus 94 ~~E~~~l~~l~hpniv~~~~-~~~~~~---~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~iv 168 (504)
T 3q5i_A 94 YNEISLLKSLDHPNIIKLFD-VFEDKK---YFYLVTEFYEGGELFEQIINRH-KFDECDAANIMKQILSGICYLHKHNIV 168 (504)
T ss_dssp HHHHHHHHTCCCTTBCCEEE-EEECSS---EEEEEEECCTTCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHhCCCCCCCeEEE-EEEcCC---EEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeE
Confidence 37888999999999999999 565543 68999999 8999999995443 499999999999999999999999999
Q ss_pred eccCCCCcEEEccCC---ceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004998 144 VHNVRPSCFVMSSFN---HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 144 HrDLKP~NILl~~~~---~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||||||+|||++.++ .+||+|||++.......
T Consensus 169 H~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~--------------------------------------------- 203 (504)
T 3q5i_A 169 HRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDY--------------------------------------------- 203 (504)
T ss_dssp CSCCSGGGEEESSTTCCSSEEECCCTTCEECCTTS---------------------------------------------
T ss_pred eCCCcHHHEEEecCCCCccEEEEECCCCEEcCCCC---------------------------------------------
Confidence 999999999998776 69998888874321110
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhh
Q 004998 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
.....+||+.|+|||++.+ .++.++|||||||+
T Consensus 204 ----------------------------------------------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~i 236 (504)
T 3q5i_A 204 ----------------------------------------------KLRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVI 236 (504)
T ss_dssp ----------------------------------------------CBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHH
T ss_pred ----------------------------------------------ccccccCCcCCCCHHHhcc-CCCchHHHHHHHHH
Confidence 0011468999999999875 49999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCC--ccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004998 301 LFELFC---PFSTGEEKTRTMSSLRHRVLP--PQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p--~~~~~~~-p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
+|+|++ ||...... .....+..+.+. ...+..+ +...+||.+||++||.+|||+.|+|+||||+....
T Consensus 237 l~~ll~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~~ 310 (504)
T 3q5i_A 237 MYILLCGYPPFGGQNDQ-DIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYAN 310 (504)
T ss_dssp HHHHHHSSCSSCCSSHH-HHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHTCC
T ss_pred HHHHHhCCCCCCCCCHH-HHHHHHHcCCCCCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcCHhhhhchh
Confidence 999999 67665444 444445444332 2222333 44559999999999999999999999999987644
No 105
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=1.2e-33 Score=294.00 Aligned_cols=213 Identities=13% Similarity=0.149 Sum_probs=164.4
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..++..++||||+++++ ++.... .+|+|||| .+++|.+++... ..+++.+++.++.||+.||.|||++||
T Consensus 52 ~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i 126 (276)
T 2yex_A 52 IKKEICINKMLNHENVVKFYG-HRREGN---IQYLFLEYCSGGELFDRIEPD-IGMPEPDAQRFFHQLMAGVVYLHGIGI 126 (276)
T ss_dssp HHHHHHHHHTCCCTTBCCEEE-EEEETT---EEEEEEECCTTEEGGGGSBTT-TBCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHhcCCCCceeeee-EEEcCC---EEEEEEEecCCCcHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 346777899999999999999 554443 67999999 788999999543 459999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.++|+|||.+.........
T Consensus 127 ~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~--------------------------------------------- 161 (276)
T 2yex_A 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRE--------------------------------------------- 161 (276)
T ss_dssp ECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE---------------------------------------------
T ss_pred eccCCChHHEEEccCCCEEEeeCCCccccCCCcch---------------------------------------------
Confidence 99999999999999999999999887432110000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCC-Cccccchhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYRLGVLL 301 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~-s~~sDIwSLGvll 301 (720)
. ......||+.|+|||++.+..+ +.++|||||||++
T Consensus 162 -----------------------~--------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il 198 (276)
T 2yex_A 162 -----------------------R--------------------LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 198 (276)
T ss_dssp -----------------------C--------------------CBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHH
T ss_pred -----------------------h--------------------cccCCccccCccChHHHhcCCCCCCcchHHHHHHHH
Confidence 0 0011468999999999988774 7899999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCC-CCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRHRV-LPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~-~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
|||++ ||............+.... ..+......+...+|+.+||+.||.+|||+.|+++||||+....
T Consensus 199 ~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~ 270 (276)
T 2yex_A 199 TAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPLK 270 (276)
T ss_dssp HHHHHSSCCCSCSCTTSHHHHHHHTTCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCCCC
T ss_pred HHHHhCCCCCCCCchHHHHHHHhhhcccccCchhhcCHHHHHHHHHHCCCCchhCCCHHHHhcCccccChhh
Confidence 99999 6765443322333333222 22222233344559999999999999999999999999998744
No 106
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=4.7e-34 Score=297.98 Aligned_cols=209 Identities=18% Similarity=0.240 Sum_probs=143.4
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++.+++||||+++++ ++.+.. .+|++||| .+++|.+++......+++.+++.++.||+.||.|||++|
T Consensus 57 ~~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ 132 (278)
T 3cok_A 57 RVQNEVKIHCQLKHPSILELYN-YFEDSN---YVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHG 132 (278)
T ss_dssp HHHHHHHHHTTBCCTTBCCEEE-EEECSS---EEEEEEECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCeEeEEE-EEccCC---eEEEEEecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3446778999999999999999 555543 67999999 789999999776667999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++.++|+|||.+........
T Consensus 133 i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~--------------------------------------------- 167 (278)
T 3cok_A 133 ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHE--------------------------------------------- 167 (278)
T ss_dssp EECSSCCGGGEEECTTCCEEECCCTTCEECC-------------------------------------------------
T ss_pred eecCCCCHHHEEEcCCCCEEEEeecceeeccCCCC---------------------------------------------
Confidence 99999999999999999999999988743211100
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......||+.|+|||++.+..++.++|||||||++
T Consensus 168 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 202 (278)
T 3cok_A 168 ---------------------------------------------KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMF 202 (278)
T ss_dssp ---------------------------------------------------------------------CTHHHHHHHHH
T ss_pred ---------------------------------------------cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHH
Confidence 00013679999999999988899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
|||++ ||....... ....+.... ...+... +...+|+.+||+.||.+|||+.++|+||||....
T Consensus 203 ~~l~~g~~p~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~ 270 (278)
T 3cok_A 203 YTLLIGRPPFDTDTVKN-TLNKVVLAD--YEMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLDHPFMSRNS 270 (278)
T ss_dssp HHHHHSSCSSCCCSCC------CCSSC--CCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSTTTC---
T ss_pred HHHHhCCCCCCChhHHH-HHHHHhhcc--cCCccccCHHHHHHHHHHcccCHhhCCCHHHHhcCccccCCC
Confidence 99999 665543321 111221111 1112223 3445999999999999999999999999998753
No 107
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=1.2e-33 Score=302.92 Aligned_cols=209 Identities=20% Similarity=0.271 Sum_probs=148.0
Q ss_pred eeehhhhcccCC-CCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 64 KHSDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 64 ~~~e~~~Ls~l~-HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
..+|..+|..+. ||||+++++ ++.+.. .+|+|||| .|++|.+++... ..+++.+++.|+.||+.||.|||++|
T Consensus 52 ~~~e~~~l~~l~~h~niv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~ 126 (325)
T 3kn6_A 52 TQKEITALKLCEGHPNIVKLHE-VFHDQL---HTFLVMELLNGGELFERIKKK-KHFSETEASYIMRKLVSAVSHMHDVG 126 (325)
T ss_dssp HHHHHHHHHHTTTCTTBCCEEE-EEECSS---EEEEEECCCCSCBHHHHHHHC-SCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhcCCCCeeEEEE-EEEcCC---EEEEEEEccCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 346777888887 999999999 555543 67999999 889999999654 35999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCC---ceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCC
Q 004998 142 IVVHNVRPSCFVMSSFN---HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~---~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
|+||||||+|||++.++ .+||+|||++........
T Consensus 127 ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~------------------------------------------ 164 (325)
T 3kn6_A 127 VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQ------------------------------------------ 164 (325)
T ss_dssp EECCCCCGGGEEEEC----CEEEECCCTTCEECCC---------------------------------------------
T ss_pred CeecCCCHHHEEEecCCCcccEEEeccccceecCCCCC------------------------------------------
Confidence 99999999999998665 799988888743211100
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhh
Q 004998 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
......||+.|+|||++.+..++.++||||||
T Consensus 165 ------------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG 196 (325)
T 3kn6_A 165 ------------------------------------------------PLKTPCFTLHYAAPELLNQNGYDESCDLWSLG 196 (325)
T ss_dssp -------------------------------------------------------------------CCCCHHHHHHHHH
T ss_pred ------------------------------------------------cccccCCCcCccCHHHhcCCCCCCccchHHHH
Confidence 00114679999999999999999999999999
Q ss_pred hhhhhccc---cCCCCc------hHHHHHHHhhcCCCC--cccccc-CchHHHHHHHcCCCCCCCCCChHHHHcCcccCC
Q 004998 299 VLLFELFC---PFSTGE------EKTRTMSSLRHRVLP--PQLLLK-FPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 366 (720)
Q Consensus 299 vll~eLlt---pf~~~~------~~~~~~~~l~~~~~p--~~~~~~-~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~ 366 (720)
|++|+|++ ||.... .....+..+..+.++ ...... .+...+||.+||++||.+|||+.|+++||||+.
T Consensus 197 ~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h~w~~~ 276 (325)
T 3kn6_A 197 VILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQD 276 (325)
T ss_dssp HHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCCCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTCGGGCT
T ss_pred HHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhcChhhcc
Confidence 99999999 665432 123445555544332 222223 344559999999999999999999999999987
Q ss_pred C
Q 004998 367 P 367 (720)
Q Consensus 367 ~ 367 (720)
.
T Consensus 277 ~ 277 (325)
T 3kn6_A 277 G 277 (325)
T ss_dssp T
T ss_pred C
Confidence 5
No 108
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.1e-33 Score=300.09 Aligned_cols=210 Identities=17% Similarity=0.205 Sum_probs=157.2
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..++.+++||||+++++ ++.... .+++|||| .+++|.+++... ..+++..++.++.||+.||.|||++||+
T Consensus 50 ~~E~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~i~~~l~~~l~~lH~~~iv 124 (311)
T 4agu_A 50 LREIRMLKQLKHPNLVNLLE-VFRRKR---RLHLVFEYCDHTVLHELDRYQ-RGVPEHLVKSITWQTLQAVNFCHKHNCI 124 (311)
T ss_dssp HHHHHHHHHCCCTTBCCEEE-EEEETT---EEEEEEECCSEEHHHHHHHTS-SCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHhCCCCCccchhh-eeecCC---eEEEEEEeCCCchHHHHHhhh-cCCCHHHHHHHHHHHHHHHHHHHHCCCc
Confidence 37888999999999999999 555443 57999999 778888877544 4599999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+||+++.++.++|+|||.+....... +
T Consensus 125 H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~---------------------------------~-------------- 157 (311)
T 4agu_A 125 HRDVKPENILITKHSVIKLCDFGFARLLTGPS---------------------------------D-------------- 157 (311)
T ss_dssp CCCCSGGGEEECTTSCEEECCCTTCEECC---------------------------------------------------
T ss_pred CCCCChhhEEEcCCCCEEEeeCCCchhccCcc---------------------------------c--------------
Confidence 99999999999999999999998874321110 0
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-CCCCccccchhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLF 302 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sDIwSLGvll~ 302 (720)
......||++|+|||++.+ ..++.++|||||||++|
T Consensus 158 -------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~ 194 (311)
T 4agu_A 158 -------------------------------------------YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFA 194 (311)
T ss_dssp ---------------------------------------------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHH
T ss_pred -------------------------------------------ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHH
Confidence 0011367999999999987 45899999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhh--cCC------------------CCc---------cccccCchHHHHHHHcCCCCCC
Q 004998 303 ELFC---PFSTGEEKTRTMSSLR--HRV------------------LPP---------QLLLKFPKEASFCLWLLHPEPS 350 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~--~~~------------------~p~---------~~~~~~p~~~~li~~~L~~dP~ 350 (720)
+|++ ||.............. ... .+. .+....+...+|+.+||++||.
T Consensus 195 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~ 274 (311)
T 4agu_A 195 ELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPT 274 (311)
T ss_dssp HHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTT
T ss_pred HHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChh
Confidence 9999 6665544322211111 010 000 0011223345999999999999
Q ss_pred CCCChHHHHcCcccCCCcc
Q 004998 351 GRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 351 ~Rpta~eiL~hp~~~~~~~ 369 (720)
+|||+.|+|+||||+....
T Consensus 275 ~Rpt~~ell~hp~f~~~~~ 293 (311)
T 4agu_A 275 ERLTCEQLLHHPYFENIRE 293 (311)
T ss_dssp TSCCHHHHHTSGGGTTCC-
T ss_pred hcCCHHHHhcChHHHhccC
Confidence 9999999999999998744
No 109
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.8e-33 Score=308.36 Aligned_cols=214 Identities=17% Similarity=0.199 Sum_probs=162.1
Q ss_pred eehhhhcccCCCCCceecccceeecC----------------------------------CCCCcEEEEEecCCCCHHHH
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENE----------------------------------AAIDPFVHAIEWGDVSLRQW 110 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~----------------------------------~~~~~~~lv~E~~ggsL~~~ 110 (720)
.+|..+|..++|||||++++.++... .....+++||||.+++|.+.
T Consensus 48 ~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~ 127 (383)
T 3eb0_A 48 NRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHKV 127 (383)
T ss_dssp CHHHHHHTTCCCTTBCCEEEEEEEC-------------------------------------CCEEEEEECCCSEEHHHH
T ss_pred HHHHHHHHHcCCCCccchhheeeecCcccccccccccccccccccccccccccccccccCCCceEEEEEEecCCccHHHH
Confidence 36888999999999999999544322 22335899999966798888
Q ss_pred Hh---CCCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEc-cCCceEEeccCcccCCCCCCccccccccccc
Q 004998 111 LD---KPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMS-SFNHVSFIESASCSDSGSDSHEEGLNTQNME 186 (720)
Q Consensus 111 L~---~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~-~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~ 186 (720)
+. ..+..+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++.......
T Consensus 128 l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~----------- 196 (383)
T 3eb0_A 128 LKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE----------- 196 (383)
T ss_dssp HHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS-----------
T ss_pred HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC-----------
Confidence 73 3455699999999999999999999999999999999999998 68899999998874321110
Q ss_pred ccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCc
Q 004998 187 TKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPM 266 (720)
Q Consensus 187 ~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~ 266 (720)
T Consensus 197 -------------------------------------------------------------------------------- 196 (383)
T 3eb0_A 197 -------------------------------------------------------------------------------- 196 (383)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccccCCcccCCccccCCC-CCccccchhhhhhhhhccc---cCCCCchHHHHHHHhhcCC-----------------
Q 004998 267 KQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRV----------------- 325 (720)
Q Consensus 267 ~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~----------------- 325 (720)
......||+.|+|||++.+.. ++.++|||||||++|||++ ||............+....
T Consensus 197 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~ 276 (383)
T 3eb0_A 197 PSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEV 276 (383)
T ss_dssp CCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--C
T ss_pred CCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccc
Confidence 001146799999999998765 8999999999999999999 7776554433333322100
Q ss_pred -CCc--------cccccCch-HHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004998 326 -LPP--------QLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 326 -~p~--------~~~~~~p~-~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
+|. .+....+. ..+||.+||++||.+|||+.|+|+||||+....
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~ 330 (383)
T 3eb0_A 277 RFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFFDHLRN 330 (383)
T ss_dssp CCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGHHHHH
T ss_pred cCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcCHHHHHHHh
Confidence 110 01122333 459999999999999999999999999987533
No 110
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=3.3e-34 Score=310.40 Aligned_cols=213 Identities=16% Similarity=0.235 Sum_probs=161.5
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCC---CCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAA---IDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~---~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
+..+|..+|.+++||||+++++ ++..... ...+|++|||.+++|.+++.. .+++.+++.++.||+.||.|||+
T Consensus 69 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~---~~~~~~~~~i~~qi~~al~~LH~ 144 (353)
T 3coi_A 69 RAYRELLLLKHMQHENVIGLLD-VFTPASSLRNFYDFYLVMPFMQTDLQKIMGL---KFSEEKIQYLVYQMLKGLKYIHS 144 (353)
T ss_dssp HHHHHHHHHHHCCCTTBCCCSE-EECSCSSGGGCCCCEEEEECCSEEGGGTTTS---CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCcccHhh-eEecccccccceeEEEEeccccCCHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHH
Confidence 4447888999999999999999 5544332 234699999977899887733 39999999999999999999999
Q ss_pred cCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004998 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||+||||||+||+++.++.+||+|||.+...+..
T Consensus 145 ~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~--------------------------------------------- 179 (353)
T 3coi_A 145 AGVVHRDLKPGNLAVNEDCELKILDFGLARHADAE--------------------------------------------- 179 (353)
T ss_dssp TTCCCSSCCGGGEEECTTCCEEECSTTCTTC-------------------------------------------------
T ss_pred CCcccCCCCHHHEeECCCCcEEEeecccccCCCCC---------------------------------------------
Confidence 99999999999999999999999998887332100
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-CCCCccccchhhh
Q 004998 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLG 298 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sDIwSLG 298 (720)
.....||+.|+|||++.+ ..++.++||||||
T Consensus 180 ------------------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG 211 (353)
T 3coi_A 180 ------------------------------------------------MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVG 211 (353)
T ss_dssp ----------------------------------------------------CCSBCCSCHHHHSCCSCCCTTHHHHHHH
T ss_pred ------------------------------------------------ccccccCcCcCCHHHHhCcCCCCchhhHHHHH
Confidence 001367999999999987 5689999999999
Q ss_pred hhhhhccc---cCCCCchHHHHHHHhhc-C----------------------------CCCccccccCchHHHHHHHcCC
Q 004998 299 VLLFELFC---PFSTGEEKTRTMSSLRH-R----------------------------VLPPQLLLKFPKEASFCLWLLH 346 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~-~----------------------------~~p~~~~~~~p~~~~li~~~L~ 346 (720)
|++|||++ ||............+.. + .++.......+...+||.+||+
T Consensus 212 ~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~ 291 (353)
T 3coi_A 212 CIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLE 291 (353)
T ss_dssp HHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSC
T ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcC
Confidence 99999999 66655433222111110 0 0011111223455699999999
Q ss_pred CCCCCCCChHHHHcCcccCCCccchH
Q 004998 347 PEPSGRPKMGELLQSEFLNEPRDSME 372 (720)
Q Consensus 347 ~dP~~Rpta~eiL~hp~~~~~~~~l~ 372 (720)
+||.+|||+.++|+||||+....+..
T Consensus 292 ~dp~~Rpt~~e~l~hp~f~~~~~~~~ 317 (353)
T 3coi_A 292 LDVDKRLTAAQALTHPFFEPFRDPEE 317 (353)
T ss_dssp SCTTTSCCHHHHHTSGGGTTTCCGGG
T ss_pred CCcccCCCHHHHhcCcchhhccCccc
Confidence 99999999999999999998755433
No 111
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=2e-33 Score=312.03 Aligned_cols=214 Identities=16% Similarity=0.206 Sum_probs=161.0
Q ss_pred eehhhhcccCCCCCceecccceeecCC--CCCcEEEEEecCCCCHHHHHh---CCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEA--AIDPFVHAIEWGDVSLRQWLD---KPKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~--~~~~~~lv~E~~ggsL~~~L~---~~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
.+|..+|.+++|||||++++.++.... ....+++||||.+++|.+++. .....+++..++.|+.||+.||.|||+
T Consensus 95 ~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~ 174 (420)
T 1j1b_A 95 NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 174 (420)
T ss_dssp CHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEEEECCCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEeehhcccccHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 368889999999999999995544322 223467999997778887773 344569999999999999999999999
Q ss_pred cCceeccCCCCcEEEccC-CceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCC
Q 004998 140 QGIVVHNVRPSCFVMSSF-NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~-~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
+||+||||||+|||++.+ +.+||+|||+++......
T Consensus 175 ~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~~~~------------------------------------------- 211 (420)
T 1j1b_A 175 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE------------------------------------------- 211 (420)
T ss_dssp TTEECSCCSGGGEEEETTTTEEEECCCTTCEECCTTC-------------------------------------------
T ss_pred CCccccCCChhhEEEeCCCCeEEeccchhhhhcccCC-------------------------------------------
Confidence 999999999999999955 568999888874321100
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-CCCccccchhh
Q 004998 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRL 297 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSL 297 (720)
.....+||++|+|||++.+. .|+.++|||||
T Consensus 212 ------------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSl 243 (420)
T 1j1b_A 212 ------------------------------------------------PNVSYICSRYYRAPELIFGATDYTSSIDVWSA 243 (420)
T ss_dssp ------------------------------------------------CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHH
T ss_pred ------------------------------------------------CceeeeeCCCcCCHHHHcCCCCCCchhhhHHH
Confidence 00114789999999999775 59999999999
Q ss_pred hhhhhhccc---cCCCCchHHHHHHHhhcC------------------CCCcc--------cccc-CchHHHHHHHcCCC
Q 004998 298 GVLLFELFC---PFSTGEEKTRTMSSLRHR------------------VLPPQ--------LLLK-FPKEASFCLWLLHP 347 (720)
Q Consensus 298 Gvll~eLlt---pf~~~~~~~~~~~~l~~~------------------~~p~~--------~~~~-~p~~~~li~~~L~~ 347 (720)
||+||||++ ||............+... .+|.. +... .+...+||.+||++
T Consensus 244 G~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~ 323 (420)
T 1j1b_A 244 GCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEY 323 (420)
T ss_dssp HHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCS
T ss_pred HHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccC
Confidence 999999999 677655443333222210 01100 1112 23455999999999
Q ss_pred CCCCCCChHHHHcCcccCCCcc
Q 004998 348 EPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 348 dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
||.+|||+.|+|+||||.....
T Consensus 324 dP~~R~t~~e~l~hp~f~~~~~ 345 (420)
T 1j1b_A 324 TPTARLTPLEACAHSFFDELRD 345 (420)
T ss_dssp SGGGSCCHHHHHTSGGGGGGGC
T ss_pred ChhHCCCHHHHhCCHhhccccc
Confidence 9999999999999999987643
No 112
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=1.9e-33 Score=313.23 Aligned_cols=196 Identities=16% Similarity=0.220 Sum_probs=151.0
Q ss_pred CCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEE
Q 004998 75 DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFV 153 (720)
Q Consensus 75 ~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NIL 153 (720)
+||||+++++ ++.... .+|+||||.+++|.+++... ...+++..++.|+.||+.||.|||++|||||||||+|||
T Consensus 157 ~~~~iv~~~~-~~~~~~---~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIL 232 (429)
T 3kvw_A 157 NTMNVIHMLE-NFTFRN---HICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENIL 232 (429)
T ss_dssp SCSCBCCEEE-EEEETT---EEEEEECCCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEE
T ss_pred CCcCEEEEEe-ecccCC---eEEEEEeccCCCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeE
Confidence 7889999999 554443 68999999778999999443 345999999999999999999999999999999999999
Q ss_pred EccCCc--eEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccCCCc
Q 004998 154 MSSFNH--VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSA 231 (720)
Q Consensus 154 l~~~~~--vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~ 231 (720)
++.++. +||+|||++...+..
T Consensus 233 l~~~~~~~vkL~DFG~a~~~~~~--------------------------------------------------------- 255 (429)
T 3kvw_A 233 LKQQGRSGIKVIDFGSSCYEHQR--------------------------------------------------------- 255 (429)
T ss_dssp ESSTTSCCEEECCCTTCEETTCC---------------------------------------------------------
T ss_pred EccCCCcceEEeecccceecCCc---------------------------------------------------------
Confidence 998887 999988877321110
Q ss_pred cccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhccc---cC
Q 004998 232 YGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PF 308 (720)
Q Consensus 232 ~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt---pf 308 (720)
....+||+.|+|||++.+..++.++|||||||++|||++ ||
T Consensus 256 ------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf 299 (429)
T 3kvw_A 256 ------------------------------------VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLL 299 (429)
T ss_dssp ------------------------------------CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred ------------------------------------ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCC
Confidence 011468999999999999999999999999999999999 66
Q ss_pred CCCchHHHHHHHhhc-CCCCccc-------------------------------------------------------c-
Q 004998 309 STGEEKTRTMSSLRH-RVLPPQL-------------------------------------------------------L- 331 (720)
Q Consensus 309 ~~~~~~~~~~~~l~~-~~~p~~~-------------------------------------------------------~- 331 (720)
............+.. +..++.+ .
T Consensus 300 ~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 379 (429)
T 3kvw_A 300 PGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKG 379 (429)
T ss_dssp CCSSHHHHHHHHHHHHCCCCHHHHHTBTTHHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTT
T ss_pred CCCCHHHHHHHHHHHcCCCCHHHHHhhhhhhhccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhccc
Confidence 655443322222211 1111100 0
Q ss_pred ccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 332 LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 332 ~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
...+...+||.+||++||.+|||+.|+|+||||+..
T Consensus 380 ~~~~~~~dli~~~L~~dP~~Rpta~e~L~Hpw~~~~ 415 (429)
T 3kvw_A 380 CDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLRRR 415 (429)
T ss_dssp CCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTTC--
T ss_pred cchHHHHHHHHHHCCCChhhCCCHHHHhCChhhccC
Confidence 012345699999999999999999999999999976
No 113
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=1.3e-33 Score=298.06 Aligned_cols=209 Identities=17% Similarity=0.292 Sum_probs=161.1
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++.+++||||+++++ ++.... .+|+|||| .|++|.+++...+ .+++.+++.++.||+.||.|||++|
T Consensus 57 ~~~~e~~~l~~l~hp~iv~~~~-~~~~~~---~~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~ 131 (294)
T 4eqm_A 57 RFEREVHNSSQLSHQNIVSMID-VDEEDD---CYYLVMEYIEGPTLSEYIESHG-PLSVDTAINFTNQILDGIKHAHDMR 131 (294)
T ss_dssp HHHHHHHHHTTCCBTTBCCEEE-EEECSS---EEEEEEECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhcCCCCCCceEEE-eeeeCC---eEEEEEeCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 4558888999999999999999 555443 67999999 8999999995543 4999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||++.........
T Consensus 132 i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-------------------------------------------- 167 (294)
T 4eqm_A 132 IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLT-------------------------------------------- 167 (294)
T ss_dssp CCCCCCCGGGEEECTTSCEEECCCSSSTTC--------------------------------------------------
T ss_pred cccCCCCHHHEEECCCCCEEEEeCCCcccccccccc--------------------------------------------
Confidence 999999999999999999999999987433211000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......||+.|+|||++.+..++.++|||||||++
T Consensus 168 ---------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l 202 (294)
T 4eqm_A 168 ---------------------------------------------QTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVL 202 (294)
T ss_dssp ----------------------------------------------------CCSSCCHHHHHTCCCCTTHHHHHHHHHH
T ss_pred ---------------------------------------------ccCccccCccccCHhHhcCCCCCchHhHHHHHHHH
Confidence 00114689999999999999999999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCc--cccccCchH-HHHHHHcCCCCCCCCCChHHHHcCcccC
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRHRVLPP--QLLLKFPKE-ASFCLWLLHPEPSGRPKMGELLQSEFLN 365 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~--~~~~~~p~~-~~li~~~L~~dP~~Rpta~eiL~hp~~~ 365 (720)
|||++ ||............+.....+. .....+|.. .+++.+||++||.+||+..+.+.++|..
T Consensus 203 ~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~ 272 (294)
T 4eqm_A 203 YEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSS 272 (294)
T ss_dssp HHHHHSSCSSCSSCHHHHHHHHHSSCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHT
T ss_pred HHHHhCCCCCCCCChHHHHHHHhhccCCCcchhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHH
Confidence 99999 7877666555555554433221 223344444 4999999999999999555555555543
No 114
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.5e-33 Score=303.50 Aligned_cols=218 Identities=18% Similarity=0.199 Sum_probs=163.8
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC---------------------------
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP--------------------------- 114 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~--------------------------- 114 (720)
+..+|..+|.+++|||||++++ ++.+.. .+|+|||| .|++|.+++...
T Consensus 74 ~~~~E~~~l~~l~hpniv~~~~-~~~~~~---~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (345)
T 3hko_A 74 RIKTEVRLMKKLHHPNIARLYE-VYEDEQ---YICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEA 149 (345)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EEECSS---EEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCcceeeh-hhccCC---eEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccc
Confidence 3447888999999999999999 555443 68999999 899999998410
Q ss_pred ------------CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEccCC--ceEEeccCcccCCCCCCccccc
Q 004998 115 ------------KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFN--HVSFIESASCSDSGSDSHEEGL 180 (720)
Q Consensus 115 ------------~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~--~vkliDfg~a~~~g~~~~~~~~ 180 (720)
...+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||.+.........
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~--- 226 (345)
T 3hko_A 150 INGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNG--- 226 (345)
T ss_dssp HHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC---
T ss_pred cccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEecCCCceEEEeeccccccccccCcc---
Confidence 11246788999999999999999999999999999999998766 8999999887432110000
Q ss_pred ccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcc
Q 004998 181 NTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEK 260 (720)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~ 260 (720)
.
T Consensus 227 ----------------------------~--------------------------------------------------- 227 (345)
T 3hko_A 227 ----------------------------E--------------------------------------------------- 227 (345)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ----------------------------c---------------------------------------------------
Confidence 0
Q ss_pred cCCCCccccccccCCcccCCccccC--CCCCccccchhhhhhhhhccc---cCCCCchHHHHHHHhhcCC-CC-cccccc
Q 004998 261 KQPFPMKQILLMETNWYASPEELAG--APVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRV-LP-PQLLLK 333 (720)
Q Consensus 261 ~~~~~~~~~~~~GT~~Y~APE~l~~--~~~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~-~p-~~~~~~ 333 (720)
........||+.|+|||++.+ ..++.++|||||||++|||++ ||............+.... ++ +.....
T Consensus 228 ----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (345)
T 3hko_A 228 ----YYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVL 303 (345)
T ss_dssp -----------CCCGGGCCHHHHTCSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCTTSGGGGGS
T ss_pred ----cccccccCCCccccCchhhccCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHhcccccCCcccccC
Confidence 000011468999999999976 558999999999999999999 7776655544443333322 22 222223
Q ss_pred CchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCccc
Q 004998 334 FPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 334 ~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
.+...+||.+||.+||.+|||+.++|+||||+...+.
T Consensus 304 ~~~~~~li~~~l~~~p~~Rps~~~~l~hp~~~~~~~~ 340 (345)
T 3hko_A 304 SPLARDLLSNLLNRNVDERFDAMRALQHPWISQFSDK 340 (345)
T ss_dssp CHHHHHHHHHHSCSCTTTSCCHHHHHHSHHHHTTSSC
T ss_pred CHHHHHHHHHHcCCChhHCCCHHHHhcChhhccChHh
Confidence 4455699999999999999999999999999987543
No 115
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=3.8e-33 Score=297.72 Aligned_cols=213 Identities=16% Similarity=0.209 Sum_probs=160.2
Q ss_pred ehhhhccc---CCCCCceecccceeec-CCCCCcEEEEEecCCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004998 66 SDGVELTH---GDHLRNQGGLSGVCEN-EAAIDPFVHAIEWGDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 66 ~e~~~Ls~---l~HpnIV~l~~~~~~~-~~~~~~~~lv~E~~ggsL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+|..++.. ++||||+++++.+... ......+++||||.+++|.+++... ...+++..++.++.||+.||.|||++
T Consensus 60 ~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~ 139 (326)
T 1blx_A 60 REVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH 139 (326)
T ss_dssp HHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhhhccCCCCeEeeeeeeeecccCCCceEEEEEecCCCCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 45445544 4899999999943311 1223468999999667999999543 34599999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004998 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+||+++.++.+||+|||.+...+...
T Consensus 140 gi~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~--------------------------------------------- 174 (326)
T 1blx_A 140 RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQM--------------------------------------------- 174 (326)
T ss_dssp TCCCCCCCGGGEEECTTCCEEECSCCSCCCCCGGG---------------------------------------------
T ss_pred CceeccCCHHHeEEcCCCCEEEecCcccccccCCC---------------------------------------------
Confidence 99999999999999999999999998874321100
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhh
Q 004998 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
......||+.|+|||++.+..++.++|||||||+
T Consensus 175 ----------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i 208 (326)
T 1blx_A 175 ----------------------------------------------ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCI 208 (326)
T ss_dssp ----------------------------------------------GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHH
T ss_pred ----------------------------------------------CccccccccceeCHHHHhcCCCCcchhHHHHHHH
Confidence 0011468999999999999889999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCC------------------------ccccccCch-HHHHHHHcCCCCCCCC
Q 004998 301 LFELFC---PFSTGEEKTRTMSSLRHRVLP------------------------PQLLLKFPK-EASFCLWLLHPEPSGR 352 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p------------------------~~~~~~~p~-~~~li~~~L~~dP~~R 352 (720)
+|||++ ||............+.....+ ..+...++. ..+||.+||++||.+|
T Consensus 209 l~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R 288 (326)
T 1blx_A 209 FAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKR 288 (326)
T ss_dssp HHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTS
T ss_pred HHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccC
Confidence 999999 676655443322222110000 011123333 3499999999999999
Q ss_pred CChHHHHcCcccCCCcc
Q 004998 353 PKMGELLQSEFLNEPRD 369 (720)
Q Consensus 353 pta~eiL~hp~~~~~~~ 369 (720)
||+.|+|+||||+....
T Consensus 289 pt~~e~l~hp~~~~~~~ 305 (326)
T 1blx_A 289 ISAYSALSHPYFQDLER 305 (326)
T ss_dssp CCHHHHHTSGGGTTCCC
T ss_pred CCHHHHhcCccccccch
Confidence 99999999999998744
No 116
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=6.6e-34 Score=308.67 Aligned_cols=208 Identities=18% Similarity=0.194 Sum_probs=161.5
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHc-
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ- 140 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~- 140 (720)
+..+|..+|.+++||||+++++ ++..+. .+|+|||| .|++|.+++.... .+++..+..++.||+.||.|||++
T Consensus 77 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~~i~~~l~~lh~~~ 151 (360)
T 3eqc_A 77 QIIRELQVLHECNSPYIVGFYG-AFYSDG---EISICMEHMDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYLREKH 151 (360)
T ss_dssp HHHHHHGGGGGCCCTTBCCEEE-EEEETT---EEEEEECCCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCEEEEeE-EEEECC---EEEEEEECCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHhC
Confidence 3447888999999999999999 554443 58999999 7899999995543 499999999999999999999996
Q ss_pred CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004998 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+|||++.++.++|+|||++......
T Consensus 152 ~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~---------------------------------------------- 185 (360)
T 3eqc_A 152 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---------------------------------------------- 185 (360)
T ss_dssp CCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH----------------------------------------------
T ss_pred CEEcCCccHHHEEECCCCCEEEEECCCCcccccc----------------------------------------------
Confidence 9999999999999999999999998876211000
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhh
Q 004998 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
......||+.|+|||++.+..++.++|||||||+
T Consensus 186 ----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~i 219 (360)
T 3eqc_A 186 ----------------------------------------------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLS 219 (360)
T ss_dssp ----------------------------------------------C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHH
T ss_pred ----------------------------------------------cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHH
Confidence 0011468999999999999989999999999999
Q ss_pred hhhccc---cCCCCchHHH-----------------------------------------HHHHhhcCCCCccccccCc-
Q 004998 301 LFELFC---PFSTGEEKTR-----------------------------------------TMSSLRHRVLPPQLLLKFP- 335 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~-----------------------------------------~~~~l~~~~~p~~~~~~~p- 335 (720)
+|+|++ ||........ ....+.....+......++
T Consensus 220 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (360)
T 3eqc_A 220 LVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSL 299 (360)
T ss_dssp HHHHHHTSCCSSCCCHHHHHHHHC------------------------------CCCHHHHHHHHHHSCCCCCCTTTSCH
T ss_pred HHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcccccccCCCCcccchhhhhHHhccCCCCCCcccccH
Confidence 999999 7765433211 1111122222222222233
Q ss_pred hHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 336 KEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 336 ~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
...+||.+||++||.+|||+.|+|+||||+..
T Consensus 300 ~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 331 (360)
T 3eqc_A 300 EFQDFVNKCLIKNPAERADLKQLMVHAFIKRS 331 (360)
T ss_dssp HHHHHHHHHHCSSTTTSCCHHHHHTSHHHHHH
T ss_pred HHHHHHHHHhhcChhhCCCHHHHhhChHhhcc
Confidence 34599999999999999999999999999864
No 117
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=6.5e-35 Score=319.16 Aligned_cols=202 Identities=11% Similarity=0.081 Sum_probs=149.2
Q ss_pred ehh---hhcccCCCCCceecccc------eeecCCC------------C--CcEEEEEecCCCCHHHHHhCCCC------
Q 004998 66 SDG---VELTHGDHLRNQGGLSG------VCENEAA------------I--DPFVHAIEWGDVSLRQWLDKPKR------ 116 (720)
Q Consensus 66 ~e~---~~Ls~l~HpnIV~l~~~------~~~~~~~------------~--~~~~lv~E~~ggsL~~~L~~~~~------ 116 (720)
+|. .+|++++|||||++++. ++++... . ...|++|||.+|+|.+++...+.
T Consensus 122 ~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~~g~L~~~l~~~~~~~~~~~ 201 (377)
T 3byv_A 122 EEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHK 201 (377)
T ss_dssp HHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEECTTSCSEEEC------CEEESEEEEEECCSEEHHHHHHHHHHTTTTTH
T ss_pred HHHHHHHhccccCCHHHHHHHhhhhhhhhhhhccCCccccccccCCCceEEEEEEEEEeccCCCHHHHHHhccccccccc
Confidence 555 67888899999999942 2322211 0 13789999988899999954322
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCch
Q 004998 117 SVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPL 196 (720)
Q Consensus 117 ~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 196 (720)
.+++..++.|+.||+.||.|||++||+||||||+|||++.++.+||+|||+++..+..
T Consensus 202 ~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~---------------------- 259 (377)
T 3byv_A 202 SLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAR---------------------- 259 (377)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCGGGCEETTCE----------------------
T ss_pred cccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEechhheecCCc----------------------
Confidence 1334888899999999999999999999999999999999999999988887321100
Q ss_pred hhHhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCc
Q 004998 197 DMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNW 276 (720)
Q Consensus 197 ~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~ 276 (720)
.....| +.
T Consensus 260 -----------------------------------------------------------------------~~~~~g-~~ 267 (377)
T 3byv_A 260 -----------------------------------------------------------------------VVSSVS-RG 267 (377)
T ss_dssp -----------------------------------------------------------------------EECCCC-TT
T ss_pred -----------------------------------------------------------------------ccCCCC-cC
Confidence 011467 89
Q ss_pred ccCCccccCC-----------CCCccccchhhhhhhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHH
Q 004998 277 YASPEELAGA-----------PVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCL 342 (720)
Q Consensus 277 Y~APE~l~~~-----------~~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~ 342 (720)
|+|||++.+. .++.++|||||||++|||++ ||...... .....+. . ......+...+||.
T Consensus 268 y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~-~~~~~~~----~-~~~~~~~~~~~li~ 341 (377)
T 3byv_A 268 FEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAAL-GGSEWIF----R-SCKNIPQPVRALLE 341 (377)
T ss_dssp CCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSSCCC-------CCSGGGG----S-SCCCCCHHHHHHHH
T ss_pred ccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHCCCCCcccccc-cchhhhh----h-hccCCCHHHHHHHH
Confidence 9999999887 79999999999999999999 55432211 0111111 1 11122244559999
Q ss_pred HcCCCCCCCCCChHHHHcCcccCCC
Q 004998 343 WLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 343 ~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
+||.+||.+|||+.|+|+||||+..
T Consensus 342 ~~L~~dp~~Rpt~~e~l~hp~f~~~ 366 (377)
T 3byv_A 342 GFLRYPKEDRLLPLQAMETPEYEQL 366 (377)
T ss_dssp HHTCSSGGGCCCHHHHHTSHHHHHH
T ss_pred HHcCCCchhCCCHHHHhhChHHHHH
Confidence 9999999999999999999999875
No 118
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=6.6e-34 Score=306.05 Aligned_cols=203 Identities=19% Similarity=0.223 Sum_probs=158.0
Q ss_pred hcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhC---CCCCCCHHHHHHHHHHHHHHHHHHHHc-Cceec
Q 004998 70 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHSQ-GIVVH 145 (720)
Q Consensus 70 ~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~---~~~~l~~~~~~~i~~QIl~aL~yLHs~-gIvHr 145 (720)
.+..++||||+++++ ++.... .+|+||||.+++|.+++.. ....+++..++.|+.||+.||.|||++ ||+||
T Consensus 103 ~~~~~~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~~ivH~ 178 (340)
T 3an0_A 103 SMRTVDCPFTVTFYG-ALFREG---DVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHR 178 (340)
T ss_dssp HHTTCCCTTTCCEEE-EEECSS---CEEEEECCCSEEHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHTCCCCC
T ss_pred HHhhcCCCcEEEEee-EEEeCC---cEEEEHHHhhCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecC
Confidence 377899999999999 554443 5899999966699998842 455699999999999999999999997 99999
Q ss_pred cCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccccc
Q 004998 146 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 225 (720)
Q Consensus 146 DLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~ 225 (720)
||||+|||++.++.+||+|||++......
T Consensus 179 Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~--------------------------------------------------- 207 (340)
T 3an0_A 179 DVKPSNVLINALGQVKMCDFGISGYLVDS--------------------------------------------------- 207 (340)
T ss_dssp SCCSTTEEECSTTCEEECCCSHHHHHSCH---------------------------------------------------
T ss_pred CCCHHHEEECCCCCEEEeeCCCceecccc---------------------------------------------------
Confidence 99999999999999999998887321100
Q ss_pred ccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC----CCCCccccchhhhhhh
Q 004998 226 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG----APVSCASDIYRLGVLL 301 (720)
Q Consensus 226 ~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~----~~~s~~sDIwSLGvll 301 (720)
.......||+.|+|||++.+ ..++.++|||||||++
T Consensus 208 ----------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il 247 (340)
T 3an0_A 208 ----------------------------------------VAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITM 247 (340)
T ss_dssp ----------------------------------------HHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHH
T ss_pred ----------------------------------------cccccCCCCccccCccccccccccCCCCchhhHHHHHHHH
Confidence 00011368999999999754 3589999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|||++ ||.........+..+.....+......++ ...+||.+||+.||.+|||+.|+++||||...
T Consensus 248 ~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~ 317 (340)
T 3an0_A 248 IELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLH 317 (340)
T ss_dssp HHHHHTSCSSCCCSCHHHHHHHHHHSCCCCCCGGGSCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHH
T ss_pred HHHHHCCCCCccccchHHHHHHHhcCCCCCCCcccCCHHHHHHHHHHccCCcccCcCHHHHhcCcCcccc
Confidence 99999 77654333333333333333333333334 45599999999999999999999999999865
No 119
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=3.3e-33 Score=298.95 Aligned_cols=208 Identities=14% Similarity=0.202 Sum_probs=157.7
Q ss_pred eeehhhhcccCC-CCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 64 KHSDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 64 ~~~e~~~Ls~l~-HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
..+|..+|.++. ||||+++++ ++.+.. ....+++||| .+++|.+++.. +++.+++.++.||+.||.|||++|
T Consensus 77 ~~~E~~~l~~l~~~~~i~~~~~-~~~~~~-~~~~~lv~e~~~~~~l~~~~~~----~~~~~~~~~~~qi~~~l~~lH~~~ 150 (330)
T 3nsz_A 77 IKREIKILENLRGGPNIITLAD-IVKDPV-SRTPALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYCHSMG 150 (330)
T ss_dssp HHHHHHHHHHHTTSTTBCCEEE-EEECTT-TCCEEEEEECCCCCCHHHHGGG----CCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCCCCEEEeee-eeccCC-CCceEEEEeccCchhHHHHHHh----CCHHHHHHHHHHHHHHHHHHHhCC
Confidence 347788899987 999999999 554432 2368999999 88999998843 899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCC-ceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004998 142 IVVHNVRPSCFVMSSFN-HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~-~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
|+||||||+|||++.++ .+||+|||++.......
T Consensus 151 ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~--------------------------------------------- 185 (330)
T 3nsz_A 151 IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ--------------------------------------------- 185 (330)
T ss_dssp EECCCCSGGGEEEETTTTEEEECCCTTCEECCTTC---------------------------------------------
T ss_pred eeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCC---------------------------------------------
Confidence 99999999999999776 89999988874321110
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-CCCCccccchhhhh
Q 004998 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGV 299 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sDIwSLGv 299 (720)
......||+.|+|||++.+ ..++.++|||||||
T Consensus 186 ----------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~ 219 (330)
T 3nsz_A 186 ----------------------------------------------EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGC 219 (330)
T ss_dssp ----------------------------------------------CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHH
T ss_pred ----------------------------------------------ccccccccccccChhhhcCCCcCCchhhHHHHHH
Confidence 0011367999999999987 55899999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhh-------------c--CCCCcc--------------------ccc-cCchHHHH
Q 004998 300 LLFELFC---PFSTGEEKTRTMSSLR-------------H--RVLPPQ--------------------LLL-KFPKEASF 340 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~-------------~--~~~p~~--------------------~~~-~~p~~~~l 340 (720)
++|||++ ||.........+..+. . ...++. ... ..+...+|
T Consensus 220 il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 299 (330)
T 3nsz_A 220 MLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDF 299 (330)
T ss_dssp HHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHH
T ss_pred HHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccccccchhhhhhhccccchhhhccccccccCCHHHHHH
Confidence 9999999 6644322211111111 0 011111 011 23445599
Q ss_pred HHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004998 341 CLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 341 i~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
|.+||++||.+|||+.|+|+||||+...
T Consensus 300 i~~~L~~dP~~Rpta~e~l~hp~f~~~~ 327 (330)
T 3nsz_A 300 LDKLLRYDHQSRLTAREAMEHPYFYTVV 327 (330)
T ss_dssp HHTTSCSSGGGSCCHHHHHTSGGGTTCC
T ss_pred HHHHhcCCcccCCCHHHHhcCccHhhhc
Confidence 9999999999999999999999999863
No 120
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=2.1e-33 Score=303.46 Aligned_cols=207 Identities=17% Similarity=0.205 Sum_probs=160.3
Q ss_pred ehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 66 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
+|..+|.++ +||||+++++ +++++. .+|+|||| .|++|.+++.+.+ .+++.+++.++.||+.||.|||++||+
T Consensus 64 ~E~~~l~~~~~hp~iv~~~~-~~~~~~---~~~lv~E~~~gg~L~~~i~~~~-~~~~~~~~~~~~qi~~al~~lH~~giv 138 (342)
T 2qr7_A 64 EEIEILLRYGQHPNIITLKD-VYDDGK---YVYVVTELMKGGELLDKILRQK-FFSEREASAVLFTITKTVEYLHAQGVV 138 (342)
T ss_dssp HHHHHHHHHTTSTTBCCEEE-EEECSS---EEEEEECCCCSCBHHHHHHTCT-TCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHhcCCCCcCeEEE-EEEcCC---EEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCcE
Confidence 455567666 7999999999 565543 68999999 8999999996544 499999999999999999999999999
Q ss_pred eccCCCCcEEEccC----CceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004998 144 VHNVRPSCFVMSSF----NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 144 HrDLKP~NILl~~~----~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
||||||+|||+... +.+||+|||++....... .
T Consensus 139 HrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~---------------------------------~---------- 175 (342)
T 2qr7_A 139 HRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN---------------------------------G---------- 175 (342)
T ss_dssp CSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTT---------------------------------C----------
T ss_pred eccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCC---------------------------------C----------
Confidence 99999999998543 349998888874321110 0
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhh
Q 004998 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
.....+||+.|+|||++.+..|+.++|||||||
T Consensus 176 -----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~ 208 (342)
T 2qr7_A 176 -----------------------------------------------LLMTPCYTANFVAPEVLERQGYDAACDIWSLGV 208 (342)
T ss_dssp -----------------------------------------------CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------------------ceeccCCCccccCHHHhcCCCCCCccCeeeHhH
Confidence 001146899999999998877999999999999
Q ss_pred hhhhccc---cCCCC--chHHHHHHHhhcCCCC--ccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 300 LLFELFC---PFSTG--EEKTRTMSSLRHRVLP--PQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 300 ll~eLlt---pf~~~--~~~~~~~~~l~~~~~p--~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
++|||++ ||... ......+..+..+.++ ...+...+ ...+||.+||++||.+|||+.++|+||||...
T Consensus 209 il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~hp~~~~~ 284 (342)
T 2qr7_A 209 LLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWIVHW 284 (342)
T ss_dssp HHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCCCCCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHTG
T ss_pred HHHHHhcCCCCCCCCCcCCHHHHHHHHccCCcccCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCCeecCc
Confidence 9999999 66542 2333455555544332 22333344 44599999999999999999999999999653
No 121
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=5.1e-33 Score=295.58 Aligned_cols=208 Identities=16% Similarity=0.226 Sum_probs=162.4
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++||||+++++ ++..+ .+++|||| .|++|.+++......+++.+++.|+.||+.||.|||++|
T Consensus 78 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ 152 (307)
T 3lb7_A 78 AFRNEVAVLRKTRHVNILLFMG-YMTKD----NLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKN 152 (307)
T ss_dssp HHHHHHHHHTTCCCTTBCCEEE-EECSS----SCEEEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCEEEEEE-EEccC----cEEEEEecCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3347888999999999999999 55433 36899999 899999999766667999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||++.........
T Consensus 153 ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~~-------------------------------------------- 188 (307)
T 3lb7_A 153 IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGS-------------------------------------------- 188 (307)
T ss_dssp CCCSCCCSSSEEECTTSCEEECCCCSSCC---------------------------------------------------
T ss_pred EeeCCCChhhEEEcCCCCEEEccCCCceeccccccc--------------------------------------------
Confidence 999999999999999999999999987432110000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCcccc---CCCCCccccchhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA---GAPVSCASDIYRLG 298 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~---~~~~s~~sDIwSLG 298 (720)
.......||+.|+|||++. +..++.++||||||
T Consensus 189 --------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG 224 (307)
T 3lb7_A 189 --------------------------------------------QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYG 224 (307)
T ss_dssp -------------------------------------------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHH
T ss_pred --------------------------------------------ccccCCCCCcceECcceeeccCCCCCCchhhHHHHH
Confidence 0001146899999999996 55589999999999
Q ss_pred hhhhhccc---cCCCCchHHHHHHHhhcCCCCcc---ccccCch-HHHHHHHcCCCCCCCCCChHHHHcCcc
Q 004998 299 VLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQ---LLLKFPK-EASFCLWLLHPEPSGRPKMGELLQSEF 363 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~---~~~~~p~-~~~li~~~L~~dP~~Rpta~eiL~hp~ 363 (720)
|++|||++ ||............+.....++. +...+|. ..+|+.+||+.||.+||++.+++++.+
T Consensus 225 ~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~ 296 (307)
T 3lb7_A 225 IVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIE 296 (307)
T ss_dssp HHHHHHHHSSCTTTTCCCHHHHHHHHHHTCCCCCSTTSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHH
T ss_pred HHHHHHHhCCCCCccCCcHHHHHHHHhcCCCCcchhhhhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHH
Confidence 99999999 77766555444444444433333 2234444 459999999999999999999998543
No 122
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=4.2e-33 Score=291.86 Aligned_cols=204 Identities=14% Similarity=0.188 Sum_probs=162.6
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..++.+++||||+++++ ++.+.. .+|++||| .+++|.+++...+ .+++..++.++.||+.||.|||++||
T Consensus 61 ~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i 135 (284)
T 2vgo_A 61 LRREIEIQSHLRHPNILRMYN-YFHDRK---RIYLMLEFAPRGELYKELQKHG-RFDEQRSATFMEELADALHYCHERKV 135 (284)
T ss_dssp HHHHHHHHHTCCCTTBCCEEE-EEECSS---EEEEEECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHTTTE
T ss_pred HHHHHHHHhcCCCCCEeeEEE-EEEcCC---EEEEEEEeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 346777999999999999999 555443 67999999 7889999995543 49999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.++|+|||.+......
T Consensus 136 ~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~------------------------------------------------ 167 (284)
T 2vgo_A 136 IHRDIKPENLLMGYKGELKIADFGWSVHAPSL------------------------------------------------ 167 (284)
T ss_dssp ECCCCSGGGEEECTTCCEEECCCTTCEECSSS------------------------------------------------
T ss_pred eecCCCHHHEEEcCCCCEEEecccccccCccc------------------------------------------------
Confidence 99999999999999999999998876321100
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......||+.|+|||++.+..++.++|||||||++|
T Consensus 168 --------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ 203 (284)
T 2vgo_A 168 --------------------------------------------RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCY 203 (284)
T ss_dssp --------------------------------------------CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHH
T ss_pred --------------------------------------------ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHH
Confidence 001136899999999999988999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 303 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
+|++ ||....... ....+..... .++..+ +...+||.+||+.||.+|||+.++++||||+..
T Consensus 204 ~l~~g~~pf~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h~~~~~~ 269 (284)
T 2vgo_A 204 EFLVGMPPFDSPSHTE-THRRIVNVDL--KFPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKAN 269 (284)
T ss_dssp HHHHSSCTTCCSSHHH-HHHHHHTTCC--CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTCHHHHHH
T ss_pred HHHHCCCCCCCCCHhH-HHHHHhcccc--CCCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhhCHHHHhh
Confidence 9999 676554432 2333332211 122223 344599999999999999999999999999865
No 123
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=4.4e-33 Score=293.61 Aligned_cols=215 Identities=15% Similarity=0.208 Sum_probs=155.6
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-------CCCCCCHHHHHHHHHHHHHHHH
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-------PKRSVDVYECLHIFRQIVEIVY 135 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-------~~~~l~~~~~~~i~~QIl~aL~ 135 (720)
..+|..++.+++||||+++++ ++.... .+++|||| .|++|.+++.. ....+++..++.++.||+.||.
T Consensus 60 ~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~ 135 (303)
T 2vwi_A 60 LLKEIQAMSQCHHPNIVSYYT-SFVVKD---ELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLE 135 (303)
T ss_dssp ------CCCCCCCTTBCCEEE-EEESSS---CEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhcCCCCEeeEEE-EEeecC---CcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHH
Confidence 346777999999999999999 554443 57999999 79999999952 3445899999999999999999
Q ss_pred HHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccC
Q 004998 136 AAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTA 215 (720)
Q Consensus 136 yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~ 215 (720)
|||++||+||||||+||+++.++.++|+|||.+....... ++.
T Consensus 136 ~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~---------------------------------~~~---- 178 (303)
T 2vwi_A 136 YLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGG---------------------------------DIT---- 178 (303)
T ss_dssp HHHHTTCCCCCCSGGGEEECTTCCEEECCCHHHHHCC-------------------------------------------
T ss_pred HHHhCCCCCCCCChhhEEEcCCCCEEEEeccchheeccCC---------------------------------Ccc----
Confidence 9999999999999999999999999999998874321110 000
Q ss_pred CCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-CCCCccccc
Q 004998 216 PTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDI 294 (720)
Q Consensus 216 ~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sDI 294 (720)
.........||+.|+|||++.+ ..++.++||
T Consensus 179 ------------------------------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di 210 (303)
T 2vwi_A 179 ------------------------------------------------RNKVRKTFVGTPCWMAPEVMEQVRGYDFKADI 210 (303)
T ss_dssp ---------------------------------------------------------CCCTTCCHHHHHHHHCCCTHHHH
T ss_pred ------------------------------------------------chhhhcccCCCccccCHHHhccccCCCchhhH
Confidence 0000011468999999999976 458999999
Q ss_pred hhhhhhhhhccc---cCCCCchHHHHHHHhhcCCC-------CccccccCch-HHHHHHHcCCCCCCCCCChHHHHcCcc
Q 004998 295 YRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVL-------PPQLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQSEF 363 (720)
Q Consensus 295 wSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~-------p~~~~~~~p~-~~~li~~~L~~dP~~Rpta~eiL~hp~ 363 (720)
|||||++|||++ ||............+..... .+.....++. ..+|+.+||++||.+|||+.++++|||
T Consensus 211 ~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~ 290 (303)
T 2vwi_A 211 WSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKF 290 (303)
T ss_dssp HHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCCCTTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTSTT
T ss_pred HHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCCccccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhChh
Confidence 999999999999 67665444333333332211 1112223333 459999999999999999999999999
Q ss_pred cCCC
Q 004998 364 LNEP 367 (720)
Q Consensus 364 ~~~~ 367 (720)
|+..
T Consensus 291 ~~~~ 294 (303)
T 2vwi_A 291 FQKA 294 (303)
T ss_dssp C---
T ss_pred hhcC
Confidence 9876
No 124
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=3.9e-33 Score=302.11 Aligned_cols=217 Identities=15% Similarity=0.142 Sum_probs=160.7
Q ss_pred eeeehhhhcccCCCCCceecccceeecCC---CCCcEEEEEecCCCCHHHHHh---CCCCCCCHHHHHHHHHHHHHHHHH
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEA---AIDPFVHAIEWGDVSLRQWLD---KPKRSVDVYECLHIFRQIVEIVYA 136 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~---~~~~~~lv~E~~ggsL~~~L~---~~~~~l~~~~~~~i~~QIl~aL~y 136 (720)
+...+...+..++||||+++++.+..... ....+++||||.+++|.+.+. .....+++..++.++.||+.||.|
T Consensus 65 ~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~ 144 (360)
T 3e3p_A 65 RELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGC 144 (360)
T ss_dssp HHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCEEEEEEEECCSCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCcccHHHhhhccccccccceeEEEEeecccccHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHH
Confidence 33455666788899999999994443222 222378999996667776663 345568999999999999999999
Q ss_pred HH--HcCceeccCCCCcEEEcc-CCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccc
Q 004998 137 AH--SQGIVVHNVRPSCFVMSS-FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLV 213 (720)
Q Consensus 137 LH--s~gIvHrDLKP~NILl~~-~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla 213 (720)
|| ++||+||||||+|||++. ++.+||+|||++.......
T Consensus 145 lH~~~~~ivH~Dlkp~NIll~~~~~~~kl~Dfg~a~~~~~~~-------------------------------------- 186 (360)
T 3e3p_A 145 LHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSE-------------------------------------- 186 (360)
T ss_dssp HTSTTTCCBCSCCCGGGEEEETTTTEEEECCCTTCBCCCTTS--------------------------------------
T ss_pred HhCCCCCeecCcCCHHHEEEeCCCCcEEEeeCCCceecCCCC--------------------------------------
Confidence 99 999999999999999996 8999999998874332110
Q ss_pred cCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC-CCccc
Q 004998 214 TAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCAS 292 (720)
Q Consensus 214 ~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~s 292 (720)
......||+.|+|||++.+.. ++.++
T Consensus 187 -----------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~ 213 (360)
T 3e3p_A 187 -----------------------------------------------------PNVAYICSRYYRAPELIFGNQHYTTAV 213 (360)
T ss_dssp -----------------------------------------------------CCCSTTSCGGGCCHHHHTTCSSCCTHH
T ss_pred -----------------------------------------------------CcccccCCcceeCHHHHcCCCCCCcHH
Confidence 001146799999999997665 89999
Q ss_pred cchhhhhhhhhccc---cCCCCchHHHHHHHhhcCCCCc-c-----------------------------ccccCchHHH
Q 004998 293 DIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPP-Q-----------------------------LLLKFPKEAS 339 (720)
Q Consensus 293 DIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~-~-----------------------------~~~~~p~~~~ 339 (720)
|||||||++|||++ ||............+.....++ . .....+...+
T Consensus 214 Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (360)
T 3e3p_A 214 DIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYD 293 (360)
T ss_dssp HHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHH
Confidence 99999999999999 7766554433322222111110 0 0001234459
Q ss_pred HHHHcCCCCCCCCCChHHHHcCcccCCCccc
Q 004998 340 FCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 340 li~~~L~~dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
||.+||++||.+|||+.|+|+||||+....+
T Consensus 294 li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~~ 324 (360)
T 3e3p_A 294 LLSALLQYLPEERMKPYEALCHPYFDELHDP 324 (360)
T ss_dssp HHHHHTCSSGGGSCCHHHHTTSGGGGGGGCT
T ss_pred HHHHHhccCccccCCHHHHhcCccccccCCc
Confidence 9999999999999999999999999987543
No 125
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=2.5e-33 Score=300.66 Aligned_cols=209 Identities=21% Similarity=0.266 Sum_probs=158.5
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..++.+++||||+++++ ++.... .+|+|||| .+++|.+++.... .+++..++.++.||+.||.|||++||
T Consensus 71 ~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~qi~~~l~~LH~~~i 145 (331)
T 4aaa_A 71 AMREIKLLKQLRHENLVNLLE-VCKKKK---RWYLVFEFVDHTILDDLELFPN-GLDYQVVQKYLFQIINGIGFCHSHNI 145 (331)
T ss_dssp HHHHHHHHHHCCCTTBCCEEE-EEEETT---EEEEEEECCSEEHHHHHHHSTT-CCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhhCCCCCEeeEEE-EeecCC---EEEEEEecCCcchHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence 347888999999999999999 555443 67999999 7777777764443 49999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.+||+|||.+........
T Consensus 146 vH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~---------------------------------------------- 179 (331)
T 4aaa_A 146 IHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE---------------------------------------------- 179 (331)
T ss_dssp CCCCCCGGGEEECTTSCEEECCCTTC------------------------------------------------------
T ss_pred EccCcChheEEEcCCCcEEEEeCCCceeecCCcc----------------------------------------------
Confidence 9999999999999999999999988743211100
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-CCCccccchhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLL 301 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGvll 301 (720)
......||++|+|||++.+. .++.++|||||||++
T Consensus 180 --------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il 215 (331)
T 4aaa_A 180 --------------------------------------------VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLV 215 (331)
T ss_dssp ------------------------------------------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHH
T ss_pred --------------------------------------------ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHH
Confidence 00113689999999999876 589999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhc-CCCCc------------------c---------cccc-CchHHHHHHHcCCCCC
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRH-RVLPP------------------Q---------LLLK-FPKEASFCLWLLHPEP 349 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~-~~~p~------------------~---------~~~~-~p~~~~li~~~L~~dP 349 (720)
|+|++ ||............+.. +..++ . .... .+...+||.+||++||
T Consensus 216 ~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP 295 (331)
T 4aaa_A 216 TEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDP 295 (331)
T ss_dssp HHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSG
T ss_pred HHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccccccccCccccccchhhhcccchhHHHHHHHHHHhccCc
Confidence 99999 67665544332222110 00100 0 0112 2334599999999999
Q ss_pred CCCCChHHHHcCcccCCC
Q 004998 350 SGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 350 ~~Rpta~eiL~hp~~~~~ 367 (720)
.+|||+.|+|+||||+..
T Consensus 296 ~~Rpt~~ell~hp~f~~~ 313 (331)
T 4aaa_A 296 DKRPFCAELLHHDFFQMD 313 (331)
T ss_dssp GGSCCGGGGGGSHHHHGG
T ss_pred ccCCCHHHHhcCchhccC
Confidence 999999999999999875
No 126
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=3.4e-33 Score=318.62 Aligned_cols=207 Identities=17% Similarity=0.221 Sum_probs=164.2
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC---CCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---KRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~---~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
.+|..+|.+++||||+++++ ++++.. .+|+|||| .|++|.++|... ...+++..++.|+.||+.||.|||++
T Consensus 233 ~~E~~iL~~l~hp~Iv~l~~-~~~~~~---~l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~ 308 (543)
T 3c4z_A 233 MVEKKILAKVHSRFIVSLAY-AFETKT---DLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR 308 (543)
T ss_dssp HHHHHHHHHCCCTTBCCEEE-EEECSS---EEEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhcCCCCEeeEEE-EEeeCC---EEEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc
Confidence 36778999999999999999 555543 58999999 899999999543 34599999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004998 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+|||++.+|++||+|||++........
T Consensus 309 gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~~-------------------------------------------- 344 (543)
T 3c4z_A 309 NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT-------------------------------------------- 344 (543)
T ss_dssp TEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCC--------------------------------------------
T ss_pred CCcccCCChHHEEEeCCCCEEEeecceeeeccCCCc--------------------------------------------
Confidence 999999999999999999999999988743211100
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhh
Q 004998 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
.....+||+.|+|||++.+..|+.++|||||||+
T Consensus 345 ----------------------------------------------~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvi 378 (543)
T 3c4z_A 345 ----------------------------------------------KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVT 378 (543)
T ss_dssp ----------------------------------------------CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHH
T ss_pred ----------------------------------------------ccccccCCccccChhhhcCCCCChHHhcCcchHH
Confidence 0011478999999999999899999999999999
Q ss_pred hhhccc---cCCCCc---hHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCC-----hHHHHcCcccCCC
Q 004998 301 LFELFC---PFSTGE---EKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEP 367 (720)
Q Consensus 301 l~eLlt---pf~~~~---~~~~~~~~l~~~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rpt-----a~eiL~hp~~~~~ 367 (720)
+|||++ ||.... ........+..... .++..+ +...+||.+||++||.+||+ +.+|++||||+..
T Consensus 379 lyelltG~~PF~~~~~~~~~~~~~~~i~~~~~--~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~Hpff~~i 455 (543)
T 3c4z_A 379 LYEMIAARGPFRARGEKVENKELKQRVLEQAV--TYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDI 455 (543)
T ss_dssp HHHHHHSSCSSCCTTCCCCHHHHHHHHHHCCC--CCCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTSGGGTTC
T ss_pred HHHHHhCCCCCCCCccchhHHHHHHHHhhccc--CCCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHcCccccCC
Confidence 999999 676542 22333333333221 122233 44559999999999999995 5899999999986
No 127
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=99.98 E-value=1.2e-32 Score=292.55 Aligned_cols=212 Identities=13% Similarity=0.163 Sum_probs=166.0
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..++.+++||||+++++ ++.... .+|+|||| .+++|.+++......+++..++.++.||+.||.|||++||
T Consensus 71 ~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i 146 (314)
T 3com_A 71 IIKEISIMQQCDSPHVVKYYG-SYFKNT---DLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRK 146 (314)
T ss_dssp HHHHHHHHHTCCCTTBCCEEE-EEEETT---EEEEEEECCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHhCCCCCCccEEE-EEEeCC---EEEEEeecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCC
Confidence 346788999999999999999 444432 57999999 7889999996445569999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+|+||||+||+++.++.++|+|||.+........
T Consensus 147 ~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~---------------------------------------------- 180 (314)
T 3com_A 147 IHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMA---------------------------------------------- 180 (314)
T ss_dssp ECCCCSGGGEEECTTCCEEECCCTTCEECBTTBS----------------------------------------------
T ss_pred cCCCcCHHHEEECCCCCEEEeecccchhhhhhcc----------------------------------------------
Confidence 9999999999999999999999988743211100
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......||+.|+|||++.+..++.++|||||||++|
T Consensus 181 --------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ 216 (314)
T 3com_A 181 --------------------------------------------KRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAI 216 (314)
T ss_dssp --------------------------------------------CBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHH
T ss_pred --------------------------------------------ccCccCCCCCccChhhcCCCCCCccccHHHHHHHHH
Confidence 001146899999999999988999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004998 303 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
+|++ ||.........................++ ...+||.+||..||.+|||+.++|+||||.....
T Consensus 217 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~~~~~~~~~ 287 (314)
T 3com_A 217 EMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQHPFVRSAKG 287 (314)
T ss_dssp HHHHSSCTTTTSCHHHHHHHHHHSCCCCCSSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHTCCC
T ss_pred HHHhCCCCCCCCChHHHHHHHhcCCCcccCCcccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHhcCCc
Confidence 9999 66655443332222222211111223344 4459999999999999999999999999998744
No 128
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=99.98 E-value=3.1e-33 Score=311.65 Aligned_cols=212 Identities=15% Similarity=0.177 Sum_probs=153.6
Q ss_pred eeehhhhcccC-CCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..+|.++ +|||||++++ ++.+.. .+|+||||.+++|.+++......+.+.+++.++.||+.||.|||++||
T Consensus 64 ~~~E~~~l~~l~~HpnIv~l~~-~~~~~~---~~~lv~E~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i 139 (432)
T 3p23_A 64 ADREVQLLRESDEHPNVIRYFC-TEKDRQ---FQYIAIELCAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNI 139 (432)
T ss_dssp CHHHHHHHHHSCCCTTBCCEEE-EEEETT---EEEEEEECCSEEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhccCCCCcCeEEE-EEecCC---EEEEEEECCCCCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHCcC
Confidence 44788899888 7999999999 555443 579999997789999997666557777788999999999999999999
Q ss_pred eeccCCCCcEEEccC-----CceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCC
Q 004998 143 VVHNVRPSCFVMSSF-----NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 143 vHrDLKP~NILl~~~-----~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~ 217 (720)
+||||||+|||++.+ ..+||+|||++........ .+
T Consensus 140 vHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~--------------------------------~~------- 180 (432)
T 3p23_A 140 VHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRH--------------------------------SF------- 180 (432)
T ss_dssp CCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC----------------------------------------------
T ss_pred EeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCc--------------------------------ce-------
Confidence 999999999999532 3577888887743211100 00
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC---CCCCccccc
Q 004998 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG---APVSCASDI 294 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~---~~~s~~sDI 294 (720)
.......||++|+|||++.+ ..++.++||
T Consensus 181 ------------------------------------------------~~~~~~~gt~~y~APE~l~~~~~~~~t~~~Di 212 (432)
T 3p23_A 181 ------------------------------------------------SRRSGVPGTEGWIAPEMLSEDCKENPTYTVDI 212 (432)
T ss_dssp -----------------------------------------------------CCSCTTSCCGGGTSCC---CCCTHHHH
T ss_pred ------------------------------------------------eeccccCCCcCccChhhhhcccccCCCcHHHH
Confidence 00012478999999999974 447889999
Q ss_pred hhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCcccc-c-cCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 295 YRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLL-L-KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 295 wSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~-~-~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|||||++|||++ ||...... .....+.....+.... . ..+...+||.+||+.||.+|||+.|+|+||||...
T Consensus 213 wSlG~il~ellt~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~hp~f~~~ 290 (432)
T 3p23_A 213 FSAGCVFYYVISEGSHPFGKSLQR-QANILLGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFFWSL 290 (432)
T ss_dssp HHHHHHHHHHHTTSCBTTBSTTTH-HHHHHTTCCCCTTSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTSTTTCCH
T ss_pred HHHHHHHHHHHcCCCCCcchhhHH-HHHHHhccCCccccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHhCccccCh
Confidence 999999999998 45433222 1111222111111111 1 11223599999999999999999999999999875
No 129
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=99.98 E-value=5.9e-33 Score=293.85 Aligned_cols=206 Identities=17% Similarity=0.238 Sum_probs=164.1
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..++.+++||||+++++ ++.+.. .+|++||| .|++|.+++...+ .+++..++.++.||+.||.|||++||
T Consensus 53 ~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i 127 (304)
T 2jam_A 53 LENEIAVLKKIKHENIVTLED-IYESTT---HYYLVMQLVSGGELFDRILERG-VYTEKDASLVIQQVLSAVKYLHENGI 127 (304)
T ss_dssp HHHHHHHHHHCCCTTBCCEEE-EEECSS---EEEEEECCCCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhCCCCCeeehhh-hcccCC---EEEEEEEcCCCccHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 346788999999999999999 555443 67999999 7899999995443 49999999999999999999999999
Q ss_pred eeccCCCCcEEE---ccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004998 143 VVHNVRPSCFVM---SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 143 vHrDLKP~NILl---~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||||||+||++ +.++.++|+|||.+......
T Consensus 128 ~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~--------------------------------------------- 162 (304)
T 2jam_A 128 VHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG--------------------------------------------- 162 (304)
T ss_dssp CCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCB---------------------------------------------
T ss_pred cccCCCHHHEEEecCCCCCCEEEccCCcceecCCC---------------------------------------------
Confidence 999999999999 67889999888876321100
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhh
Q 004998 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
......||+.|+|||++.+..++.++|||||||
T Consensus 163 -----------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ 195 (304)
T 2jam_A 163 -----------------------------------------------IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGV 195 (304)
T ss_dssp -----------------------------------------------TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHH
T ss_pred -----------------------------------------------ccccccCCCCccChHHhccCCCCchhhHHHHHH
Confidence 000136899999999999988999999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhcCCC--CccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 300 LLFELFC---PFSTGEEKTRTMSSLRHRVL--PPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~~~~--p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
++|+|++ ||...... .....+..+.. +.......+ ...+||.+||.+||.+|||+.|+|+||||...
T Consensus 196 il~~l~~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~ 268 (304)
T 2jam_A 196 ITYILLCGYPPFYEETES-KLFEKIKEGYYEFESPFWDDISESAKDFICHLLEKDPNERYTCEKALSHPWIDGN 268 (304)
T ss_dssp HHHHHHHSSCTTTTSCHH-HHHHHHHHCCCCCCTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHSS
T ss_pred HHHHHHHCCCCCCCCCHH-HHHHHHHcCCCCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCccccCC
Confidence 9999999 66554443 33444444322 223333344 44599999999999999999999999999875
No 130
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=99.98 E-value=2.7e-33 Score=299.18 Aligned_cols=208 Identities=21% Similarity=0.248 Sum_probs=160.5
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++||||+++++ ++... .+|+|||| .+++|.+++... ..+++..++.++.||+.||.|||++|
T Consensus 61 ~~~~E~~~l~~l~h~~i~~~~~-~~~~~----~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~ 134 (322)
T 2ycf_A 61 NVETEIEILKKLNHPCIIKIKN-FFDAE----DYYIVLELMEGGELFDKVVGN-KRLKEATCKLYFYQMLLAVQYLHENG 134 (322)
T ss_dssp CHHHHHHHHHHCCCTTBCCEEE-EEESS----SEEEEEECCTTEETHHHHSTT-CCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHhCCCCCCceEee-EEcCC----ceEEEEecCCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 4457888999999999999999 55443 37999999 789999999544 45999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCc---eEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCC
Q 004998 142 IVVHNVRPSCFVMSSFNH---VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~---vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
|+||||||+|||++.++. +||+|||.+...+...
T Consensus 135 ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~------------------------------------------- 171 (322)
T 2ycf_A 135 IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS------------------------------------------- 171 (322)
T ss_dssp EECCCCSGGGEEESSSSSSCCEEECCCTTCEECCCCH-------------------------------------------
T ss_pred eeccCCCHHHEEEecCCCCCeEEEccCccceeccccc-------------------------------------------
Confidence 999999999999987664 9999888874321110
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCcccc---CCCCCccccch
Q 004998 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA---GAPVSCASDIY 295 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~---~~~~s~~sDIw 295 (720)
......||+.|+|||++. ...++.++|||
T Consensus 172 ------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~ 203 (322)
T 2ycf_A 172 ------------------------------------------------LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCW 203 (322)
T ss_dssp ------------------------------------------------HHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHH
T ss_pred ------------------------------------------------ccccccCCcCccCchhhccCCCCCCCchhhHH
Confidence 000136899999999974 45589999999
Q ss_pred hhhhhhhhccc---cCCCCchHHHHHHHhhcCC--CCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 296 RLGVLLFELFC---PFSTGEEKTRTMSSLRHRV--LPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 296 SLGvll~eLlt---pf~~~~~~~~~~~~l~~~~--~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
||||++|+|++ ||............+..+. +.+......+ ...+||.+||+.||.+|||+.++|+||||...
T Consensus 204 slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h~~~~~~ 281 (322)
T 2ycf_A 204 SLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDE 281 (322)
T ss_dssp HHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGCCH
T ss_pred HHHHHHHHHHhCCCCCcccchHHHHHHHHHhCccccCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhhCcCcCCH
Confidence 99999999999 6654332222222333222 2233333344 44599999999999999999999999999864
No 131
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=99.98 E-value=1e-32 Score=300.62 Aligned_cols=204 Identities=18% Similarity=0.203 Sum_probs=160.4
Q ss_pred ehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 66 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
+|..++.++ +||||+++++ ++.... ..|+|||| .|++|.+++... ..+++..++.++.||+.||.|||+.||+
T Consensus 148 ~E~~~l~~l~~hp~iv~~~~-~~~~~~---~~~lv~e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~L~~LH~~gi~ 222 (365)
T 2y7j_A 148 RETHILRQVAGHPHIITLID-SYESSS---FMFLVFDLMRKGELFDYLTEK-VALSEKETRSIMRSLLEAVSFLHANNIV 222 (365)
T ss_dssp HHHHHHHHHTTCTTBCCEEE-EEEBSS---EEEEEECCCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHhcCCCCEeEEEE-EEeeCC---EEEEEEEeCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 677788887 8999999999 554443 68999999 889999999543 3499999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.++|+|||++.......
T Consensus 223 H~Dlkp~NIl~~~~~~ikl~DfG~~~~~~~~~------------------------------------------------ 254 (365)
T 2y7j_A 223 HRDLKPENILLDDNMQIRLSDFGFSCHLEPGE------------------------------------------------ 254 (365)
T ss_dssp CSCCSGGGEEECTTCCEEECCCTTCEECCTTC------------------------------------------------
T ss_pred cCCCCHHHEEECCCCCEEEEecCcccccCCCc------------------------------------------------
Confidence 99999999999999999999998773321100
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC------CCCCccccchhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG------APVSCASDIYRL 297 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~------~~~s~~sDIwSL 297 (720)
......||+.|+|||++.+ ..++.++|||||
T Consensus 255 -------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~sl 291 (365)
T 2y7j_A 255 -------------------------------------------KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWAC 291 (365)
T ss_dssp -------------------------------------------CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHH
T ss_pred -------------------------------------------ccccCCCCCCccChhhccccccccCcCCCchhhHHhH
Confidence 0011468999999999863 348899999999
Q ss_pred hhhhhhccc---cCCCCchHHHHHHHhhcCCCCc--c-ccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCC
Q 004998 298 GVLLFELFC---PFSTGEEKTRTMSSLRHRVLPP--Q-LLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 366 (720)
Q Consensus 298 Gvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~--~-~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~ 366 (720)
||++|||++ ||...... .....+..+.... . +....+...+||.+||+.||.+|||+.|+|+||||+.
T Consensus 292 G~il~ell~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~f~r 365 (365)
T 2y7j_A 292 GVILFTLLAGSPPFWHRRQI-LMLRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQHPFFER 365 (365)
T ss_dssp HHHHHHHHHSSCSSCCSSHH-HHHHHHHHTCCCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGCC
T ss_pred HHHHHHHHHCCCCCCCCCHH-HHHHHHHhCCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCcccCC
Confidence 999999999 66654443 3333343333222 1 2233344569999999999999999999999999973
No 132
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=99.98 E-value=3.8e-33 Score=300.70 Aligned_cols=208 Identities=18% Similarity=0.220 Sum_probs=164.6
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHH------HhCC-CCCCCHHHHHHHHHHHHHHHHH
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQW------LDKP-KRSVDVYECLHIFRQIVEIVYA 136 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~------L~~~-~~~l~~~~~~~i~~QIl~aL~y 136 (720)
.+|..++.+++||||+++++ ++.... .+|+|||| .+++|.++ +... ...+++..++.++.||+.||.|
T Consensus 91 ~~E~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~ 166 (348)
T 2pml_X 91 KNELQIITDIKNEYCLTCEG-IITNYD---EVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSY 166 (348)
T ss_dssp HHHHHHHTTCCCTTBCCCSE-EEESSS---EEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCcceEEE-EEeeCC---eEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHH
Confidence 37888999999999999999 555443 68999999 78899998 6332 4569999999999999999999
Q ss_pred HHH-cCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccC
Q 004998 137 AHS-QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTA 215 (720)
Q Consensus 137 LHs-~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~ 215 (720)
||+ +||+||||||+||+++.++.++|+|||.+......
T Consensus 167 lH~~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~----------------------------------------- 205 (348)
T 2pml_X 167 IHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDK----------------------------------------- 205 (348)
T ss_dssp HHHTSCEECCCCCGGGEEECTTSCEEECCCTTCEECBTT-----------------------------------------
T ss_pred HhccCCEeecCCChHhEEEcCCCcEEEeccccccccccc-----------------------------------------
Confidence 999 99999999999999999999999998887332110
Q ss_pred CCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-CCCc-ccc
Q 004998 216 PTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSC-ASD 293 (720)
Q Consensus 216 ~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~-~sD 293 (720)
......||+.|+|||++.+. .++. ++|
T Consensus 206 ---------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~D 234 (348)
T 2pml_X 206 ---------------------------------------------------KIKGSRGTYEFMPPEFFSNESSYNGAKVD 234 (348)
T ss_dssp ---------------------------------------------------EECSSCSCGGGCCGGGGSSCCCEEHHHHH
T ss_pred ---------------------------------------------------cccCCCCCcCccCchhhcCCCCCCcchhh
Confidence 00114689999999999887 5666 999
Q ss_pred chhhhhhhhhccc---cCCCCchHHHHHHHhhcCCCCccc-----------------cccC-chHHHHHHHcCCCCCCCC
Q 004998 294 IYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQL-----------------LLKF-PKEASFCLWLLHPEPSGR 352 (720)
Q Consensus 294 IwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~-----------------~~~~-p~~~~li~~~L~~dP~~R 352 (720)
||||||++|||++ ||............+.....+... ...+ +...+||.+||+.||.+|
T Consensus 235 i~slG~il~~l~~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R 314 (348)
T 2pml_X 235 IWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAER 314 (348)
T ss_dssp HHHHHHHHHHHHHSSCSSCCSSCSHHHHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGS
T ss_pred HHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhC
Confidence 9999999999999 776655534455555443222110 0223 344599999999999999
Q ss_pred CChHHHHcCcccCCCc
Q 004998 353 PKMGELLQSEFLNEPR 368 (720)
Q Consensus 353 pta~eiL~hp~~~~~~ 368 (720)
||+.|+|+||||+...
T Consensus 315 ps~~e~l~hp~f~~~~ 330 (348)
T 2pml_X 315 ITSEDALKHEWLADTN 330 (348)
T ss_dssp CCHHHHHTSGGGTTCC
T ss_pred CCHHHHhcCccccCCC
Confidence 9999999999999863
No 133
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=99.98 E-value=6e-33 Score=290.16 Aligned_cols=207 Identities=17% Similarity=0.263 Sum_probs=163.0
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..++.+++||||+++++ ++.... .+++|||| .+++|.+++... ..+++.+++.++.||+.||.|||++||
T Consensus 55 ~~~E~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i 129 (283)
T 3bhy_A 55 IEREVNILREIRHPNIITLHD-IFENKT---DVVLILELVSGGELFDFLAEK-ESLTEDEATQFLKQILDGVHYLHSKRI 129 (283)
T ss_dssp HHHHHHHHHHCCCTTBCCEEE-EEECSS---EEEEEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHhCCCCCeeehhh-eecCCC---eEEEEEeecCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 347888999999999999999 555443 57999999 789999999543 349999999999999999999999999
Q ss_pred eeccCCCCcEEEccCC----ceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCC
Q 004998 143 VVHNVRPSCFVMSSFN----HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 143 vHrDLKP~NILl~~~~----~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
+||||||+||+++.++ .++|+|||.+.......
T Consensus 130 ~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~~~~~------------------------------------------- 166 (283)
T 3bhy_A 130 AHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGN------------------------------------------- 166 (283)
T ss_dssp ECSCCSGGGEEESCSSSSSCCEEECCCTTCEECC----------------------------------------------
T ss_pred cCCCCChHHEEEecCCCCCCceEEEecccceeccCCC-------------------------------------------
Confidence 9999999999998777 79998888773321100
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhh
Q 004998 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
......||+.|+|||++.+..++.++||||||
T Consensus 167 ------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG 198 (283)
T 3bhy_A 167 ------------------------------------------------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIG 198 (283)
T ss_dssp -----------------------------------------------------CCCGGGCCHHHHTTCCCCTHHHHHHHH
T ss_pred ------------------------------------------------cccccCCCcCccCcceecCCCCCcchhhhhHH
Confidence 00113679999999999988899999999999
Q ss_pred hhhhhccc---cCCCCchHHHHHHHhhcC--CCCccccccCch-HHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 299 VLLFELFC---PFSTGEEKTRTMSSLRHR--VLPPQLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~--~~p~~~~~~~p~-~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|++|+|++ ||...... .....+... ..++......+. ..+|+.+||+.||.+|||+.++|+||||+..
T Consensus 199 ~il~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~ 272 (283)
T 3bhy_A 199 VITYILLSGASPFLGETKQ-ETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAI 272 (283)
T ss_dssp HHHHHHHHSSCTTCCSSHH-HHHHHHHTTCCCCCHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHH
T ss_pred HHHHHHHHCCCCCCCcchH-HHHHHhHhcccCCcchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHH
Confidence 99999999 67665443 333333322 223333334444 4599999999999999999999999999875
No 134
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=99.98 E-value=1.2e-32 Score=291.14 Aligned_cols=207 Identities=19% Similarity=0.250 Sum_probs=164.4
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++.+++||||+++++ ++.... .+|+|||| .+++|.+++.. ..+++..++.++.||+.||.|||++|
T Consensus 66 ~~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~ 139 (303)
T 3a7i_A 66 DIQQEITVLSQCDSPYVTKYYG-SYLKDT---KLWIIMEYLGGGSALDLLEP--GPLDETQIATILREILKGLDYLHSEK 139 (303)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EEEETT---EEEEEEECCTTEEHHHHHTT--SCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCEeEEEE-EEecCC---eEEEEEEeCCCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 4447788999999999999999 554433 57999999 88899999954 34999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++.++|+|||.+........
T Consensus 140 i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~--------------------------------------------- 174 (303)
T 3a7i_A 140 KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI--------------------------------------------- 174 (303)
T ss_dssp EECCCCSGGGEEECTTSCEEECCCTTCEECBTTBC---------------------------------------------
T ss_pred CccCCCChheEEECCCCCEEEeecccceecCcccc---------------------------------------------
Confidence 99999999999999999999999988743211100
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......||+.|+|||++.+..++.++|||||||++
T Consensus 175 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 209 (303)
T 3a7i_A 175 ---------------------------------------------KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITA 209 (303)
T ss_dssp ---------------------------------------------CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHH
T ss_pred ---------------------------------------------ccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHH
Confidence 00114689999999999998899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccccCch-HHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~-~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|+|++ ||...... .....+..... +.+...++. ..+|+.+||++||.+|||+.++++||||...
T Consensus 210 ~~l~~g~~p~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~ 277 (303)
T 3a7i_A 210 IELARGEPPHSELHPM-KVLFLIPKNNP-PTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRN 277 (303)
T ss_dssp HHHHHSSCTTTTSCHH-HHHHHHHHSCC-CCCCSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTCHHHHHH
T ss_pred HHHccCCCCCCCcCHH-HHHHHhhcCCC-CCCccccCHHHHHHHHHHcCCChhhCcCHHHHhhChhhhcC
Confidence 99999 66554433 22333333332 333334444 4599999999999999999999999999765
No 135
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=99.98 E-value=4.1e-33 Score=296.71 Aligned_cols=202 Identities=17% Similarity=0.190 Sum_probs=154.2
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCC--CCCHHHHHHHHHHHHHHHHHHHHc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKR--SVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~--~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
..+|..+|.+++||||+++++ ++.... .+++|||| .+++|.+++..... .+++..++.++.||+.||.|||++
T Consensus 81 ~~~E~~~l~~l~hp~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~ 156 (309)
T 3p86_A 81 FLREVAIMKRLRHPNIVLFMG-AVTQPP---NLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR 156 (309)
T ss_dssp HHHHHHHHHHCCCTTBCCEEE-EECSTT---CCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHhCCCCCEeeEEE-EEEECC---ceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC
Confidence 347888999999999999999 554443 46999999 89999999965432 389999999999999999999999
Q ss_pred C--ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCC
Q 004998 141 G--IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 141 g--IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
| |+||||||+|||++.++.+||+|||++........
T Consensus 157 ~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~~------------------------------------------ 194 (309)
T 3p86_A 157 NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFL------------------------------------------ 194 (309)
T ss_dssp SSCCCCTTCCGGGEEECTTCCEEECCCC----------------------------------------------------
T ss_pred CCCEECCCCChhhEEEeCCCcEEECCCCCCcccccccc------------------------------------------
Confidence 9 99999999999999999999999988742211100
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhh
Q 004998 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
......||+.|+|||++.+..++.++||||||
T Consensus 195 ------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG 226 (309)
T 3p86_A 195 ------------------------------------------------SSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFG 226 (309)
T ss_dssp -------------------------------------------------------CCTTSCHHHHTTCCCCTTHHHHHHH
T ss_pred ------------------------------------------------ccccCCCCccccChhhhcCCCCCchhhHHHHH
Confidence 00114689999999999999999999999999
Q ss_pred hhhhhccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 299 VLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|++|||++ ||....... ....+........++..+ +...+||.+||+.||.+|||+.++++
T Consensus 227 ~il~elltg~~Pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~ 291 (309)
T 3p86_A 227 VILWELATLQQPWGNLNPAQ-VVAAVGFKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMD 291 (309)
T ss_dssp HHHHHHHHCCCTTTTSCHHH-HHHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHhCCCCCCCCCHHH-HHHHHHhcCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 99999999 776655443 333332222222333333 44569999999999999999999987
No 136
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=99.98 E-value=8.4e-33 Score=290.56 Aligned_cols=211 Identities=19% Similarity=0.192 Sum_probs=160.1
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC--CCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP--KRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~--~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
..+|..++..++||||+++++ ++.... .+++|||| .+++|.+++... ...+++..++.++.||+.||.|||++
T Consensus 66 ~~~e~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~ 141 (295)
T 2clq_A 66 LHEEIALHKHLKHKNIVQYLG-SFSENG---FIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN 141 (295)
T ss_dssp HHHHHHHHHTCCCTTBCCEEE-EEEETT---EEEEEEECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhCCCCCEeeEee-EEEeCC---cEEEEEEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhC
Confidence 346778999999999999999 554443 67999999 799999999543 23467999999999999999999999
Q ss_pred CceeccCCCCcEEEcc-CCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004998 141 GIVVHNVRPSCFVMSS-FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 141 gIvHrDLKP~NILl~~-~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
||+||||||+||+++. ++.++|+|||.+........
T Consensus 142 ~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~------------------------------------------- 178 (295)
T 2clq_A 142 QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP------------------------------------------- 178 (295)
T ss_dssp TEECCCCSGGGEEEETTTCCEEECCTTTCEESCC----------------------------------------------
T ss_pred CEEccCCChhhEEEECCCCCEEEeecccccccCCCCC-------------------------------------------
Confidence 9999999999999987 89999999988743211000
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC--CCccccchhh
Q 004998 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP--VSCASDIYRL 297 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~--~s~~sDIwSL 297 (720)
......||+.|+|||++.+.. ++.++|||||
T Consensus 179 -----------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~sl 211 (295)
T 2clq_A 179 -----------------------------------------------CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSL 211 (295)
T ss_dssp -------------------------------------------------CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHH
T ss_pred -----------------------------------------------cccccCCCccccChhhhcCCCCCCCcHHHHHHH
Confidence 001136899999999997654 8899999999
Q ss_pred hhhhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004998 298 GVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 298 Gvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
||++|+|++ ||.........+.........+.+...++ ...+|+.+||++||.+|||+.++|+||||+...
T Consensus 212 G~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~ 286 (295)
T 2clq_A 212 GCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFILKCFEPDPDKRACANDLLVDEFLKVSS 286 (295)
T ss_dssp HHHHHHHHHTSCTTGGGSSHHHHHHHHHHHCCCCCCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHTSGGGCC--
T ss_pred HHHHHHHHHCCCCccCCCchhHHHHhhccccccccccccCCHHHHHHHHHHccCChhhCCCHHHHhcChhhhhcc
Confidence 999999999 55443222222222222122233333444 445999999999999999999999999998763
No 137
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=99.98 E-value=1.2e-32 Score=294.00 Aligned_cols=213 Identities=15% Similarity=0.206 Sum_probs=159.7
Q ss_pred eehhhhcccC-CCCCceecccceeecCC--CCCcEEEEEec-CCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHH
Q 004998 65 HSDGVELTHG-DHLRNQGGLSGVCENEA--AIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 65 ~~e~~~Ls~l-~HpnIV~l~~~~~~~~~--~~~~~~lv~E~-~ggsL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
.+|..++.++ +||||+++++.+..... ....+|+|||| .+++|.+++... ...+++..++.++.||+.||.|||+
T Consensus 68 ~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~ 147 (326)
T 2x7f_A 68 KQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQ 147 (326)
T ss_dssp HHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccCCCCeeeeeeEEeeccCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 3666778887 89999999994433221 13468999999 788999999543 3459999999999999999999999
Q ss_pred cCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004998 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||+||||||+|||++.++.+||+|||++........
T Consensus 148 ~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~------------------------------------------- 184 (326)
T 2x7f_A 148 HKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVG------------------------------------------- 184 (326)
T ss_dssp TTCCCCCCSGGGEEECTTCCEEECCCTTTC--------------------------------------------------
T ss_pred CCccccCCcHHHEEEcCCCCEEEeeCcCceecCcCcc-------------------------------------------
Confidence 9999999999999999999999999988743211000
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCcccc-----CCCCCccccc
Q 004998 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-----GAPVSCASDI 294 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~-----~~~~s~~sDI 294 (720)
......||+.|+|||++. +..++.++||
T Consensus 185 -----------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di 217 (326)
T 2x7f_A 185 -----------------------------------------------RRNTFIGTPYWMAPEVIACDENPDATYDFKSDL 217 (326)
T ss_dssp -----------------------------------------------------CCGGGCCHHHHC--------CCTTHHH
T ss_pred -----------------------------------------------ccccccCCccccChhhhccccccCcCCCccchH
Confidence 001136899999999997 4558999999
Q ss_pred hhhhhhhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCch-HHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004998 295 YRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 295 wSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~-~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
|||||++|+|++ ||......... ..+.....+......++. ..+||.+||..||.+|||+.++++||||....
T Consensus 218 ~slG~il~~l~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~hp~~~~~~ 294 (326)
T 2x7f_A 218 WSLGITAIEMAEGAPPLCDMHPMRAL-FLIPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMKHPFIRDQP 294 (326)
T ss_dssp HHHHHHHHHHHHSSCTTTTSCHHHHH-HHHHHSCCCCCSCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTSHHHHCCT
T ss_pred HHHHHHHHHHHhCCCCCCCCcHHHHH-HHhhcCccccCCccccCHHHHHHHHHHhccChhhCCCHHHHhhChHHhhCc
Confidence 999999999999 66655444332 333333333333344444 45999999999999999999999999998763
No 138
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=99.98 E-value=2.4e-33 Score=307.21 Aligned_cols=252 Identities=16% Similarity=0.116 Sum_probs=158.8
Q ss_pred ehhhhcccCC--------CCCceecccceeecCCCCCcEEEEEecCCCCHHHHHh-CCCCCCCHHHHHHHHHHHHHHHHH
Q 004998 66 SDGVELTHGD--------HLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLD-KPKRSVDVYECLHIFRQIVEIVYA 136 (720)
Q Consensus 66 ~e~~~Ls~l~--------HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~-~~~~~l~~~~~~~i~~QIl~aL~y 136 (720)
+|..+|.++. ||||+++++.+...+.....+|+||||.+++|.+++. .....+++..++.|+.||+.||.|
T Consensus 82 ~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~ 161 (397)
T 1wak_A 82 DEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDY 161 (397)
T ss_dssp HHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEETTEEEEEEEECCCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhcCCCCCCcceeeeeecceeecCCCCceEEEEEeccCccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHH
Confidence 6666777764 8889999995544433445789999998888888883 333569999999999999999999
Q ss_pred HHHc-CceeccCCCCcEEEccCCceEEeccCcccCCCCC---CcccccccccccccCCCCCCc-hhhHhhhhcccccccc
Q 004998 137 AHSQ-GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSD---SHEEGLNTQNMETKDLSSPLP-LDMLQRRTRLRREDLQ 211 (720)
Q Consensus 137 LHs~-gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~---~~~~~~~~~~~~~~~~~~~~~-~~~~~~r~~~~l~Dfg 211 (720)
||++ ||+||||||+|||++.++.....+++........ ....................+ .........++++|||
T Consensus 162 lH~~~givHrDikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG 241 (397)
T 1wak_A 162 LHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLG 241 (397)
T ss_dssp HHHTTCEECCCCSGGGEEECCCHHHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGG
T ss_pred HHHhCCEecCCCCHHHeeEeccchhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccc
Confidence 9998 9999999999999987653211111111000000 000000000000000000000 1112223356777887
Q ss_pred cccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCcc
Q 004998 212 LVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCA 291 (720)
Q Consensus 212 la~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~ 291 (720)
++...... ....+||+.|+|||++.+..++.+
T Consensus 242 ~a~~~~~~------------------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~ 273 (397)
T 1wak_A 242 NACWVHKH------------------------------------------------FTEDIQTRQYRSLEVLIGSGYNTP 273 (397)
T ss_dssp GCEETTBC------------------------------------------------SCSCCSCGGGCCHHHHHTSCCCTH
T ss_pred cccccccc------------------------------------------------CccCCCCCcccCChhhcCCCCCcH
Confidence 76532210 011468999999999999999999
Q ss_pred ccchhhhhhhhhccc---cCCCCch------HH--HHHHHhhcCCCCccc------------------------------
Q 004998 292 SDIYRLGVLLFELFC---PFSTGEE------KT--RTMSSLRHRVLPPQL------------------------------ 330 (720)
Q Consensus 292 sDIwSLGvll~eLlt---pf~~~~~------~~--~~~~~l~~~~~p~~~------------------------------ 330 (720)
+|||||||++|||++ ||.+... .. ..+..+. +.+|..+
T Consensus 274 ~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (397)
T 1wak_A 274 ADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELL-GKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFE 352 (397)
T ss_dssp HHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHH-CSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHH
T ss_pred HHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhc-CCCChHHhhcccccccccCCccccccccccCCcchhH
Confidence 999999999999999 6654321 11 1111111 1111110
Q ss_pred --------ccc-CchHHHHHHHcCCCCCCCCCChHHHHcCcccCC
Q 004998 331 --------LLK-FPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 366 (720)
Q Consensus 331 --------~~~-~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~ 366 (720)
... .+...+||.+||++||.+|||+.|+|+||||+.
T Consensus 353 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~ 397 (397)
T 1wak_A 353 VLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWLNS 397 (397)
T ss_dssp HHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTSGGGGC
T ss_pred hhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhCccccC
Confidence 000 122349999999999999999999999999973
No 139
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=99.98 E-value=8.2e-33 Score=291.14 Aligned_cols=206 Identities=20% Similarity=0.259 Sum_probs=163.7
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..++..++||||+++++ ++.+.. .+|++||| .+++|.+++.... .+++.+++.++.||+.||.|||++||
T Consensus 62 ~~~e~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~i 136 (294)
T 2rku_A 62 MSMEISIHRSLAHQHVVGFHG-FFEDND---FVFVVLELCRRRSLLELHKRRK-ALTEPEARYYLRQIVLGCQYLHRNRV 136 (294)
T ss_dssp HHHHHHHHHTCCCTTBCCEEE-EEECSS---EEEEEEECCTTCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHhCCCCCEeeeee-eeccCC---EEEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 336788999999999999999 555443 67999999 8899999985433 49999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.+||+|||.+........
T Consensus 137 ~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~---------------------------------------------- 170 (294)
T 2rku_A 137 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE---------------------------------------------- 170 (294)
T ss_dssp ECCCCCGGGEEECTTCCEEECCCTTCEECCSTTC----------------------------------------------
T ss_pred cccCCChHhEEEcCCCCEEEEeccCceecccCcc----------------------------------------------
Confidence 9999999999999999999999988743211100
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......||+.|+|||++.+..++.++|||||||++|
T Consensus 171 --------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ 206 (294)
T 2rku_A 171 --------------------------------------------RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMY 206 (294)
T ss_dssp --------------------------------------------CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHH
T ss_pred --------------------------------------------ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHH
Confidence 001146899999999999888999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 303 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
+|++ ||....... ....+.....+ +.... +...+|+.+||+.||.+|||+.|+++||||...
T Consensus 207 ~l~~g~~p~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~~~~~~~ 272 (294)
T 2rku_A 207 TLLVGKPPFETSCLKE-TYLRIKKNEYS--IPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSG 272 (294)
T ss_dssp HHHHSSCTTCCSSHHH-HHHHHHTTCCC--CCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHTS
T ss_pred HHHhCCCCCCCCCHHH-HHHHHhhccCC--CccccCHHHHHHHHHHcccChhhCcCHHHHhhChheecC
Confidence 9999 666554432 33333332221 11223 445699999999999999999999999999865
No 140
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=99.98 E-value=6.9e-33 Score=298.04 Aligned_cols=205 Identities=20% Similarity=0.263 Sum_probs=163.5
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..++..++||||+++++ ++.+.. .+|++||| .+++|.+++.... .+++.+++.++.||+.||.|||++||+
T Consensus 89 ~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~-~l~~~~~~~i~~qi~~aL~~LH~~~iv 163 (335)
T 2owb_A 89 SMEISIHRSLAHQHVVGFHG-FFEDND---FVFVVLELCRRRSLLELHKRRK-ALTEPEARYYLRQIVLGCQYLHRNRVI 163 (335)
T ss_dssp HHHHHHHHTCCCTTBCCEEE-EEECSS---EEEEEECCCTTCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHhCCCCCCCeEEE-EEecCC---eEEEEEecCCCCCHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHCCCE
Confidence 36788999999999999999 555543 68999999 8899999985433 499999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.+||+|||.+........
T Consensus 164 H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~----------------------------------------------- 196 (335)
T 2owb_A 164 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE----------------------------------------------- 196 (335)
T ss_dssp CSCCCGGGEEECTTCCEEECCCTTCEECCSTTC-----------------------------------------------
T ss_pred ecCCCchhEEEcCCCCEEEeeccCceecccCcc-----------------------------------------------
Confidence 999999999999999999999988743211100
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......||+.|+|||++.+..++.++|||||||++||
T Consensus 197 -------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~ 233 (335)
T 2owb_A 197 -------------------------------------------RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYT 233 (335)
T ss_dssp -------------------------------------------CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHH
T ss_pred -------------------------------------------cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHH
Confidence 0011468999999999999889999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 304 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|++ ||....... ....+...... +...+ +...+||.+||+.||.+|||+.|+|+||||...
T Consensus 234 l~~g~~pf~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~~~~~~~~ 298 (335)
T 2owb_A 234 LLVGKPPFETSCLKE-TYLRIKKNEYS--IPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSG 298 (335)
T ss_dssp HHHSSCTTCCSSHHH-HHHHHHHTCCC--CCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHTS
T ss_pred HHHCcCCCCCCCHHH-HHHHHhcCCCC--CCccCCHHHHHHHHHHccCChhHCcCHHHHhcCccccCC
Confidence 999 666554332 23333332221 11223 445699999999999999999999999999875
No 141
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=99.98 E-value=4.7e-33 Score=295.88 Aligned_cols=216 Identities=18% Similarity=0.267 Sum_probs=159.6
Q ss_pred eeeehhhhcccCC--CCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004998 63 RKHSDGVELTHGD--HLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~Ls~l~--HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+..+|..++.++. ||||+++++ ++.... .+|++||+.+++|.+++.... .+++.+++.++.||+.||.|||++
T Consensus 72 ~~~~E~~~l~~l~~~~~~iv~~~~-~~~~~~---~~~lv~e~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~~ 146 (313)
T 3cek_A 72 SYRNEIAYLNKLQQHSDKIIRLYD-YEITDQ---YIYMVMECGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQH 146 (313)
T ss_dssp HHHHHHHHHHHHGGGCTTBCCEEE-EEECSS---EEEEEECCCSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhccccCCceEEEEE-EeecCC---EEEEEEecCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC
Confidence 3346777888887 599999999 554443 589999999999999996544 599999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004998 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+|||++ ++.+||+|||++.........
T Consensus 147 ~ivH~dlkp~NIl~~-~~~~kL~Dfg~~~~~~~~~~~------------------------------------------- 182 (313)
T 3cek_A 147 GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTS------------------------------------------- 182 (313)
T ss_dssp TCCCCCCCGGGEEEE-TTEEEECCCSSSCC--------------------------------------------------
T ss_pred CceecCCCcccEEEE-CCeEEEeeccccccccCcccc-------------------------------------------
Confidence 999999999999996 589999999887443211000
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-----------CCCC
Q 004998 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-----------APVS 289 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-----------~~~s 289 (720)
.......||+.|+|||++.+ ..++
T Consensus 183 ---------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~ 217 (313)
T 3cek_A 183 ---------------------------------------------VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKIS 217 (313)
T ss_dssp ----------------------------------------------------CCGGGCCHHHHTTCC----------CCC
T ss_pred ---------------------------------------------ccccCCCCCCCcCCHHHHhhcccccccccccccCC
Confidence 00011468999999999976 3588
Q ss_pred ccccchhhhhhhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccC
Q 004998 290 CASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLN 365 (720)
Q Consensus 290 ~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~hp~~~ 365 (720)
.++|||||||++|||++ ||.........+..+........+....+ ...+|+.+||+.||.+||++.|+|+||||+
T Consensus 218 ~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~~~ 297 (313)
T 3cek_A 218 PKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 297 (313)
T ss_dssp HHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHH
T ss_pred chHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHhcccccCCcccchHHHHHHHHHHccCCcccCcCHHHHhcCcccc
Confidence 99999999999999999 66654433333333333333333333334 455999999999999999999999999999
Q ss_pred CCccchH
Q 004998 366 EPRDSME 372 (720)
Q Consensus 366 ~~~~~l~ 372 (720)
....+..
T Consensus 298 ~~~~~~~ 304 (313)
T 3cek_A 298 IQTHPVN 304 (313)
T ss_dssp CC-----
T ss_pred CCCCchh
Confidence 8754433
No 142
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=99.98 E-value=1.5e-34 Score=315.54 Aligned_cols=207 Identities=11% Similarity=0.092 Sum_probs=140.1
Q ss_pred hhhcccCCCCCceecccce------eecCCC--------------CCcEEEEEecCCCCHHHHHhCCCCCCCHHHH----
Q 004998 68 GVELTHGDHLRNQGGLSGV------CENEAA--------------IDPFVHAIEWGDVSLRQWLDKPKRSVDVYEC---- 123 (720)
Q Consensus 68 ~~~Ls~l~HpnIV~l~~~~------~~~~~~--------------~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~---- 123 (720)
..+|.. +||||++++..+ +..... ...+|+||||.+++|.+++...+..+++...
T Consensus 116 ~~~l~~-~hp~iv~~~~~~~~p~d~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~ 194 (371)
T 3q60_A 116 AARLLG-ESPEEARDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLDFVYVFRGDEGIL 194 (371)
T ss_dssp HHHHHC-----------CBCCCCEEEEETTSCSSSBCSCC---CCEEEEEEEECCCSEEHHHHHHHHHHSCCCCHHHHHH
T ss_pred HHHhcc-cChhhhhhceeEEeeehheecCCCCCeeeccCCcccceeeeEEEEecCCCCCHHHHHHHhccccchhhhhhhh
Confidence 456666 899988866322 211111 1347999999669999999654333555555
Q ss_pred --HHHHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhh
Q 004998 124 --LHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQR 201 (720)
Q Consensus 124 --~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (720)
..++.||+.||.|||++|||||||||+|||++.++.+||+|||+++..+..
T Consensus 195 vk~~i~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~--------------------------- 247 (371)
T 3q60_A 195 ALHILTAQLIRLAANLQSKGLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTR--------------------------- 247 (371)
T ss_dssp HHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEECTTSCEEECCGGGEEETTCE---------------------------
T ss_pred hHHHHHHHHHHHHHHHHHCCCccCcCCHHHEEECCCCCEEEEecceeeecCCC---------------------------
Confidence 677799999999999999999999999999999999999988887432110
Q ss_pred hhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCc
Q 004998 202 RTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPE 281 (720)
Q Consensus 202 r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE 281 (720)
.....+|+.|+|||
T Consensus 248 ------------------------------------------------------------------~~~~~~t~~y~aPE 261 (371)
T 3q60_A 248 ------------------------------------------------------------------GPASSVPVTYAPRE 261 (371)
T ss_dssp ------------------------------------------------------------------EEGGGSCGGGCCHH
T ss_pred ------------------------------------------------------------------ccCccCCcCCcChh
Confidence 00135679999999
Q ss_pred cccC--CCCCccccchhhhhhhhhccc---cCCCCchHHH-HHHH---hh--c-CCCCccccccCchHHHHHHHcCCCCC
Q 004998 282 ELAG--APVSCASDIYRLGVLLFELFC---PFSTGEEKTR-TMSS---LR--H-RVLPPQLLLKFPKEASFCLWLLHPEP 349 (720)
Q Consensus 282 ~l~~--~~~s~~sDIwSLGvll~eLlt---pf~~~~~~~~-~~~~---l~--~-~~~p~~~~~~~p~~~~li~~~L~~dP 349 (720)
++.+ ..++.++|||||||++|||++ ||........ .+.. .. . ....+......+...+||.+||++||
T Consensus 262 ~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP 341 (371)
T 3q60_A 262 FLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDR 341 (371)
T ss_dssp HHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCTTCTTCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSST
T ss_pred hccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCcccccchhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCCh
Confidence 9987 569999999999999999999 6654422100 0000 00 0 11111112223445599999999999
Q ss_pred CCCCChHHHHcCcccCCCc
Q 004998 350 SGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 350 ~~Rpta~eiL~hp~~~~~~ 368 (720)
++|||+.++|+||||+...
T Consensus 342 ~~Rpt~~e~l~hp~f~~~~ 360 (371)
T 3q60_A 342 RRRLLPLEAMETPEFLQLQ 360 (371)
T ss_dssp TTCCCHHHHTTSHHHHHHH
T ss_pred hhCCCHHHHhcCHHHHHHH
Confidence 9999999999999998763
No 143
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=99.98 E-value=1e-32 Score=285.85 Aligned_cols=200 Identities=16% Similarity=0.175 Sum_probs=157.3
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCC-CCCHHHHHHHHHHHHHHHHHHHHc
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKR-SVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~-~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+..+|..++.+++||||+++++ ++.+.. ...++++||| .+++|.+++..... .+++.+++.++.||+.||.|||++
T Consensus 53 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~ 130 (271)
T 3kmu_A 53 DFNEECPRLRIFSHPNVLPVLG-ACQSPP-APHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTL 130 (271)
T ss_dssp HHHHHGGGGCCCSCTTEECEEE-EECTTT-SSSCEEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHhcCCCchhheEE-EEccCC-CCCeEeeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC
Confidence 3457888999999999999999 554432 2367999999 88999999965433 589999999999999999999999
Q ss_pred C--ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCC
Q 004998 141 G--IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 141 g--IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
| |+||||||+||+++.++.++++|||+.....
T Consensus 131 ~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~---------------------------------------------- 164 (271)
T 3kmu_A 131 EPLIPRHALNSRSVMIDEDMTARISMADVKFSFQ---------------------------------------------- 164 (271)
T ss_dssp SSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTS----------------------------------------------
T ss_pred CCceecCCCccceEEEcCCcceeEEeccceeeec----------------------------------------------
Confidence 9 9999999999999999999998776541100
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCc---cccch
Q 004998 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSC---ASDIY 295 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~---~sDIw 295 (720)
.....||+.|+|||++.+..++. ++|||
T Consensus 165 -------------------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~ 195 (271)
T 3kmu_A 165 -------------------------------------------------SPGRMYAPAWVAPEALQKKPEDTNRRSADMW 195 (271)
T ss_dssp -------------------------------------------------CTTCBSCGGGSCHHHHHSCGGGSCHHHHHHH
T ss_pred -------------------------------------------------ccCccCCccccChhhhccCCCCCCCchhhHH
Confidence 00136799999999998876444 79999
Q ss_pred hhhhhhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 296 RLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 296 SLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
||||++|||++ ||.................. +.++..++ ...+|+.+||+.||.+|||+.++++
T Consensus 196 slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 263 (271)
T 3kmu_A 196 SFAVLLWELVTREVPFADLSNMEIGMKVALEGLR-PTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVP 263 (271)
T ss_dssp HHHHHHHHHHHCSCTTTTSCHHHHHHHHHHSCCC-CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHHHhCCCCccccChHHHHHHHHhcCCC-CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 99999999999 77666555443444433333 33333444 4559999999999999999999985
No 144
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=99.98 E-value=1e-32 Score=295.31 Aligned_cols=206 Identities=15% Similarity=0.103 Sum_probs=159.7
Q ss_pred eeeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004998 62 LRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 62 ~r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
.+..+|..++.+++||||+++++ ++... .+++|||| .+++|.+++......+++..++.++.||+.||.|||++
T Consensus 60 ~~~~~e~~~l~~l~h~~iv~~~~-~~~~~----~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~ 134 (325)
T 3kex_A 60 QAVTDHMLAIGSLDHAHIVRLLG-LCPGS----SLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEH 134 (325)
T ss_dssp CSCCHHHHHHHTCCCTTBCCEEE-EECBS----SEEEEEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcCCCCCcCeEEE-EEcCC----ccEEEEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhC
Confidence 34557888999999999999999 55433 47899999 89999999976655699999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004998 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+|||++.++.+||+|||+++........
T Consensus 135 ~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~------------------------------------------- 171 (325)
T 3kex_A 135 GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQ------------------------------------------- 171 (325)
T ss_dssp TCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCCTTC-------------------------------------------
T ss_pred CCCCCccchheEEECCCCeEEECCCCcccccCccccc-------------------------------------------
Confidence 9999999999999999999999999988543221000
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhh
Q 004998 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
.......||+.|+|||++.+..++.++|||||||+
T Consensus 172 ---------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~ 206 (325)
T 3kex_A 172 ---------------------------------------------LLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVT 206 (325)
T ss_dssp ---------------------------------------------CC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHH
T ss_pred ---------------------------------------------ccccCCCCcccccChHHhccCCCChhhHhHHhHHH
Confidence 00011357889999999998889999999999999
Q ss_pred hhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004998 301 LFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 301 l~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~h 361 (720)
+|||++ ||...... .....+.....++......+...+|+.+||..||.+|||+.+++++
T Consensus 207 l~el~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~ 270 (325)
T 3kex_A 207 VWELMTFGAEPYAGLRLA-EVPDLLEKGERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANE 270 (325)
T ss_dssp HHHHHTTSCCTTTTSCTT-HHHHHHHTTCBCCCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHH
T ss_pred HHHHHhCCCCCccccCHH-HHHHHHHcCCCCCCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 999998 56554332 2333333332222222233455699999999999999999999873
No 145
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=99.98 E-value=4.5e-33 Score=290.49 Aligned_cols=213 Identities=17% Similarity=0.230 Sum_probs=165.0
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC---CCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~---~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
..+|..++.+++||||+++++.+.... ...+|+|||| .+++|.+++.. ....+++..++.++.||+.||.|||+
T Consensus 52 ~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~ 129 (279)
T 2w5a_A 52 LVSEVNLLRELKHPNIVRYYDRIIDRT--NTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHR 129 (279)
T ss_dssp HHHHHHHHHHCCCTTBCCEEEEEEEGG--GTEEEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCCCeEEEEEecCC--CceEEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhc
Confidence 347788999999999999999433222 2368999999 78899999943 23459999999999999999999999
Q ss_pred cC-----ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccccccccccc
Q 004998 140 QG-----IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVT 214 (720)
Q Consensus 140 ~g-----IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~ 214 (720)
+| |+||||||+||+++.++.+||+|||.+...+... .
T Consensus 130 ~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~~~~~~~---------------------------------~----- 171 (279)
T 2w5a_A 130 RSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDT---------------------------------S----- 171 (279)
T ss_dssp HC------CCCCCSGGGEEECSSSCEEECCCCHHHHC---C---------------------------------H-----
T ss_pred ccCCCCeeEEeccchhhEEEcCCCCEEEecCchheeecccc---------------------------------c-----
Confidence 99 9999999999999999999999998874321110 0
Q ss_pred CCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccc
Q 004998 215 APTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDI 294 (720)
Q Consensus 215 ~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDI 294 (720)
......||+.|+|||++.+..++.++||
T Consensus 172 ----------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di 199 (279)
T 2w5a_A 172 ----------------------------------------------------FAKTFVGTPYYMSPEQMNRMSYNEKSDI 199 (279)
T ss_dssp ----------------------------------------------------HHHHHHSCCTTCCHHHHHCC-CCHHHHH
T ss_pred ----------------------------------------------------cccccCCCccccChHHhccCCCCchhhH
Confidence 0001367999999999999889999999
Q ss_pred hhhhhhhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004998 295 YRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 295 wSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
|||||++|+|++ ||...... .....+..+..++......+...+|+.+||+.||.+|||+.|+|+|+|+.+...
T Consensus 200 ~slG~il~~l~~g~~p~~~~~~~-~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~~~~ 276 (279)
T 2w5a_A 200 WSLGCLLYELCALMPPFTAFSQK-ELAGKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLILEHHH 276 (279)
T ss_dssp HHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCGGGS
T ss_pred HHHHHHHHHHHHCCCCCcccCHH-HHHHHHhhcccccCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhhhhhcc
Confidence 999999999999 66655433 344445544443322223344559999999999999999999999999998743
No 146
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=99.98 E-value=7.2e-33 Score=299.14 Aligned_cols=224 Identities=17% Similarity=0.212 Sum_probs=163.0
Q ss_pred eeeehhhhcccCCCCCceecccceeecC--CCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENE--AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~--~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+..+|..+|.+++||||+++++ ++... .....+|++|||.+++|.+++... .+++..++.++.||+.||.|||++
T Consensus 55 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~L~~LH~~ 131 (353)
T 2b9h_A 55 RTLREIKILKHFKHENIITIFN-IQRPDSFENFNEVYIIQELMQTDLHRVISTQ--MLSDDHIQYFIYQTLRAVKVLHGS 131 (353)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-ECCCSCSTTCCCEEEEECCCSEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhCcCCCcCCeee-eecccccCccceEEEEEeccCccHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHHC
Confidence 3447888999999999999999 44322 223468999999778999999653 499999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004998 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+|||++.++.+||+|||++........... ...
T Consensus 132 ~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~----------------------------~~~---------- 173 (353)
T 2b9h_A 132 NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNS----------------------------EPT---------- 173 (353)
T ss_dssp TEECSCCCGGGEEECTTCCEEECCCTTCEECC------------------------------------------------
T ss_pred CeecCCCCHHHeEEcCCCcEEEEeccccccccccccccc----------------------------Ccc----------
Confidence 999999999999999999999999998854322110000 000
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-CCCCccccchhhhh
Q 004998 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGV 299 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sDIwSLGv 299 (720)
.........+||+.|+|||++.+ ..++.++|||||||
T Consensus 174 ------------------------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~ 211 (353)
T 2b9h_A 174 ------------------------------------------GQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGC 211 (353)
T ss_dssp ------------------------------------------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHH
T ss_pred ------------------------------------------ccccchhhccccccccCCeeeccCCCccchhhHHHHHH
Confidence 00000112478999999998865 56899999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhh--cCC-----------------------CCc----cc-cccCchHHHHHHHcCC
Q 004998 300 LLFELFC---PFSTGEEKTRTMSSLR--HRV-----------------------LPP----QL-LLKFPKEASFCLWLLH 346 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~--~~~-----------------------~p~----~~-~~~~p~~~~li~~~L~ 346 (720)
++|||++ ||.............. ... .+. .. ....+...+||.+||+
T Consensus 212 il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~ 291 (353)
T 2b9h_A 212 ILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLV 291 (353)
T ss_dssp HHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSC
T ss_pred HHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcC
Confidence 9999999 6766543322211111 000 000 01 1223344599999999
Q ss_pred CCCCCCCChHHHHcCcccCCCcc
Q 004998 347 PEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 347 ~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
+||.+|||+.|+|+||||+....
T Consensus 292 ~dP~~Rpt~~ell~hp~~~~~~~ 314 (353)
T 2b9h_A 292 FDPAKRITAKEALEHPYLQTYHD 314 (353)
T ss_dssp SSGGGSCCHHHHHTSGGGTTTCC
T ss_pred cCcccCCCHHHHhcCccccccCC
Confidence 99999999999999999998654
No 147
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=99.98 E-value=9e-33 Score=299.84 Aligned_cols=207 Identities=17% Similarity=0.220 Sum_probs=158.8
Q ss_pred eehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 65 HSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 65 ~~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
.+|..+|.++ +||||+++++ ++.... .+|+|||| .+++|.+++.... .+++.+++.++.||+.||.|||++||
T Consensus 106 ~~E~~~l~~l~~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~i 180 (355)
T 1vzo_A 106 RTERQVLEHIRQSPFLVTLHY-AFQTET---KLHLILDYINGGELFTHLSQRE-RFTEHEVQIYVGEIVLALEHLHKLGI 180 (355)
T ss_dssp CCHHHHHHHHHTCTTBCCEEE-EEEETT---EEEEEECCCCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHccCCCceeEEEE-EEeeCc---eEEEEeecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 3677788888 6999999999 554443 57999999 8899999995543 49999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.+||+|||+++.......
T Consensus 181 vH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~---------------------------------------------- 214 (355)
T 1vzo_A 181 IYRDIKLENILLDSNGHVVLTDFGLSKEFVADET---------------------------------------------- 214 (355)
T ss_dssp CCCCCCGGGEEECTTSCEEESCSSEEEECCGGGG----------------------------------------------
T ss_pred ccCCCCHHHEEECCCCcEEEeeCCCCeecccCCC----------------------------------------------
Confidence 9999999999999999999999988743211000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC--CCCccccchhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA--PVSCASDIYRLGVL 300 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~--~~s~~sDIwSLGvl 300 (720)
......+||+.|+|||++.+. .++.++|||||||+
T Consensus 215 -------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~i 251 (355)
T 1vzo_A 215 -------------------------------------------ERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVL 251 (355)
T ss_dssp -------------------------------------------GGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHH
T ss_pred -------------------------------------------CcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHH
Confidence 000114789999999999864 37899999999999
Q ss_pred hhhccc---cCCCCc---hHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCC
Q 004998 301 LFELFC---PFSTGE---EKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 367 (720)
Q Consensus 301 l~eLlt---pf~~~~---~~~~~~~~l~~~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~ 367 (720)
+|||++ ||.... ........+... .+ .+...+ +...+||.+||.+||.+|| ++.|+++||||...
T Consensus 252 l~ell~g~~pf~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f~~~ 328 (355)
T 1vzo_A 252 MYELLTGASPFTVDGEKNSQAEISRRILKS-EP-PYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKI 328 (355)
T ss_dssp HHHHHHSSCTTSCTTSCCCHHHHHHHHHHC-CC-CCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTC
T ss_pred HHHHHHCCCCCccCCccchHHHHHHHHhcc-CC-CCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcchhcC
Confidence 999999 665321 222222222222 11 222333 3445999999999999999 99999999999976
No 148
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=99.98 E-value=9.5e-33 Score=295.33 Aligned_cols=206 Identities=17% Similarity=0.250 Sum_probs=153.4
Q ss_pred ehhhhcccCCCCC------ceecccceeecCCCCCcEEEEEecCCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHH
Q 004998 66 SDGVELTHGDHLR------NQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 66 ~e~~~Ls~l~Hpn------IV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
+|..++..++|+| |+++++ ++.... .+|+||||.+++|.+++... ...+++.+++.++.||+.||.|||
T Consensus 60 ~e~~~l~~l~~~~~~~~~~i~~~~~-~~~~~~---~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH 135 (339)
T 1z57_A 60 SEIQVLEHLNTTDPNSTFRCVQMLE-WFEHHG---HICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLH 135 (339)
T ss_dssp HHHHHHHHHHHHCTTCTTCBCCEEE-EEEETT---EEEEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhcCCCCceeeEeeec-ccccCC---cEEEEEcCCCCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHH
Confidence 5666777666654 899999 555443 68999999999999999543 345899999999999999999999
Q ss_pred HcCceeccCCCCcEEEcc-------------------CCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhH
Q 004998 139 SQGIVVHNVRPSCFVMSS-------------------FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDML 199 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~~-------------------~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (720)
++||+||||||+|||++. ++.+||+|||.+...
T Consensus 136 ~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~---------------------------- 187 (339)
T 1z57_A 136 SNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYD---------------------------- 187 (339)
T ss_dssp HTTEECCCCCGGGEEESCCCEEEEEC----CEEEEESCCCEEECCCSSCEET----------------------------
T ss_pred HCCCcCCCCCHHHEEEeccccccccCCccccccccccCCCceEeeCcccccC----------------------------
Confidence 999999999999999987 445666655554211
Q ss_pred hhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccC
Q 004998 200 QRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYAS 279 (720)
Q Consensus 200 ~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~A 279 (720)
... .....||+.|+|
T Consensus 188 -----------------~~~------------------------------------------------~~~~~gt~~y~a 202 (339)
T 1z57_A 188 -----------------DEH------------------------------------------------HSTLVSTRHYRA 202 (339)
T ss_dssp -----------------TSC------------------------------------------------CCSSCSCGGGCC
T ss_pred -----------------ccc------------------------------------------------cccccCCccccC
Confidence 000 011468999999
Q ss_pred CccccCCCCCccccchhhhhhhhhccc---cCCCCchHHH--HHHHhhcCCCCcccc-----------------------
Q 004998 280 PEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTR--TMSSLRHRVLPPQLL----------------------- 331 (720)
Q Consensus 280 PE~l~~~~~s~~sDIwSLGvll~eLlt---pf~~~~~~~~--~~~~l~~~~~p~~~~----------------------- 331 (720)
||++.+..++.++|||||||++|||++ ||........ .+..+. +.+|+.+.
T Consensus 203 PE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (339)
T 1z57_A 203 PEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERIL-GPLPKHMIQKTRKRKYFHHDRLDWDEHSSAG 281 (339)
T ss_dssp HHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHHHHHHH-CSCCHHHHHHCSCGGGEETTEECCCTTSHHH
T ss_pred hHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHh-CCCCHHHHhhccchhHHhhcccccccccccc
Confidence 999999889999999999999999999 6665543321 111111 11221110
Q ss_pred ------------------ccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004998 332 ------------------LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 332 ------------------~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
...+...+||.+||++||.+|||+.|+|+||||+....
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~ 337 (339)
T 1z57_A 282 RYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFFDLLKK 337 (339)
T ss_dssp HHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGGGGC
T ss_pred chhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHhcCHHHHHHhc
Confidence 00123459999999999999999999999999987643
No 149
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=99.98 E-value=1.9e-32 Score=290.82 Aligned_cols=219 Identities=15% Similarity=0.152 Sum_probs=161.2
Q ss_pred eeeehhhhcccCCCCCceecccceeecC-----------CCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHH
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENE-----------AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIV 131 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~-----------~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl 131 (720)
+..+|..++.+++||||+++++ ++... .....+|+||||.+++|.+++.+ ..+++..++.++.||+
T Consensus 54 ~~~~e~~~l~~l~h~~iv~~~~-~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~--~~~~~~~~~~~~~qi~ 130 (320)
T 2i6l_A 54 HALREIKIIRRLDHDNIVKVFE-ILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQ--GPLLEEHARLFMYQLL 130 (320)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEE-EECTTSCBCCC----CCSCSEEEEEEECCSEEHHHHHTT--CCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCeeEEEE-eccccccccccccccccccCceeEEeeccCCCHHHHhhc--CCccHHHHHHHHHHHH
Confidence 3347888999999999999999 44222 22346899999966799999954 3489999999999999
Q ss_pred HHHHHHHHcCceeccCCCCcEEEc-cCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccccccc
Q 004998 132 EIVYAAHSQGIVVHNVRPSCFVMS-SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDL 210 (720)
Q Consensus 132 ~aL~yLHs~gIvHrDLKP~NILl~-~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Df 210 (720)
.||.|||++||+||||||+|||++ .++.+||+|||.+...+.....
T Consensus 131 ~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~--------------------------------- 177 (320)
T 2i6l_A 131 RGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSH--------------------------------- 177 (320)
T ss_dssp HHHHHHHHTTCBCCCCSGGGEEEETTTTEEEECCCTTCBCC---------------------------------------
T ss_pred HHHHHHHhCCEecCCCCHHHEEEcCCCCeEEEccCccccccCCCccc---------------------------------
Confidence 999999999999999999999997 5678999999887443111000
Q ss_pred ccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-CCCC
Q 004998 211 QLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVS 289 (720)
Q Consensus 211 gla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s 289 (720)
........||++|+|||++.+ ..++
T Consensus 178 ------------------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~ 203 (320)
T 2i6l_A 178 ------------------------------------------------------KGHLSEGLVTKWYRSPRLLLSPNNYT 203 (320)
T ss_dssp --------------------------------------------------------CCCGGGSCCTTCCHHHHHCTTCCC
T ss_pred ------------------------------------------------------ccccccccccccccCcHHhcCcccCC
Confidence 000011367999999999876 5689
Q ss_pred ccccchhhhhhhhhccc---cCCCCchHHHHHHHhhcCCC-----------------------C----ccccccC-chHH
Q 004998 290 CASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVL-----------------------P----PQLLLKF-PKEA 338 (720)
Q Consensus 290 ~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~-----------------------p----~~~~~~~-p~~~ 338 (720)
.++|||||||++|||++ ||............+..... + ....... +...
T Consensus 204 ~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (320)
T 2i6l_A 204 KAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAV 283 (320)
T ss_dssp HHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHH
T ss_pred chhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHH
Confidence 99999999999999999 77665543322222211100 0 0111223 3445
Q ss_pred HHHHHcCCCCCCCCCChHHHHcCcccCCCccch
Q 004998 339 SFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSM 371 (720)
Q Consensus 339 ~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~~l 371 (720)
+||.+||+.||.+|||+.|+|+||||+....+.
T Consensus 284 ~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~p~ 316 (320)
T 2i6l_A 284 DFLEQILTFSPMDRLTAEEALSHPYMSIYSFPM 316 (320)
T ss_dssp HHHHTTSCSSGGGSCCHHHHHTSHHHHTTCC--
T ss_pred HHHHHHcCCCccccCCHHHHhCCcccccccCcc
Confidence 999999999999999999999999999764443
No 150
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=99.97 E-value=1.7e-32 Score=299.54 Aligned_cols=204 Identities=16% Similarity=0.169 Sum_probs=159.0
Q ss_pred eeehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC---------------CCCCHHHHHHH
Q 004998 64 KHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---------------RSVDVYECLHI 126 (720)
Q Consensus 64 ~~~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~---------------~~l~~~~~~~i 126 (720)
..+|..+|.++ +|||||++++ ++.... .+|+|||| .|++|.++|.... ..+++.+++.+
T Consensus 133 ~~~E~~~l~~l~~hpnIv~~~~-~~~~~~---~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 208 (370)
T 2psq_A 133 LVSEMEMMKMIGKHKNIINLLG-ACTQDG---PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 208 (370)
T ss_dssp HHHHHHHHHHSCCCTTBCCEEE-EECSSS---SCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCEeeEEE-EEccCC---CEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHH
Confidence 34788889999 8999999999 555443 57999999 8899999995432 34899999999
Q ss_pred HHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccc
Q 004998 127 FRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLR 206 (720)
Q Consensus 127 ~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 206 (720)
+.||+.||.|||++||+||||||+|||++.++.+||+|||++.........
T Consensus 209 ~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~----------------------------- 259 (370)
T 2psq_A 209 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYY----------------------------- 259 (370)
T ss_dssp HHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCSSCEETTCCCTT-----------------------------
T ss_pred HHHHHHHHHHHHhCCeeccccchhhEEECCCCCEEEccccCCcccCcccce-----------------------------
Confidence 999999999999999999999999999999999999999988533211000
Q ss_pred ccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC
Q 004998 207 REDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA 286 (720)
Q Consensus 207 l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 286 (720)
.......||+.|+|||++.+.
T Consensus 260 -----------------------------------------------------------~~~~~~~~t~~y~aPE~~~~~ 280 (370)
T 2psq_A 260 -----------------------------------------------------------KKTTNGRLPVKWMAPEALFDR 280 (370)
T ss_dssp -----------------------------------------------------------CTTTTTTSCGGGCCHHHHHTC
T ss_pred -----------------------------------------------------------ecccCCCcccceECHhHhcCC
Confidence 000113568899999999999
Q ss_pred CCCccccchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 287 PVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 287 ~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
.++.++|||||||++|||++ ||...... .....+..+..++......+...+||.+||+.||.+|||+.|+++
T Consensus 281 ~~~~~~DvwslG~il~ellt~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~ 357 (370)
T 2psq_A 281 VYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE-ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 357 (370)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG-GHHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHH-HHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 99999999999999999997 56554332 334444444333332233345569999999999999999999986
No 151
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=99.97 E-value=1.7e-32 Score=285.65 Aligned_cols=206 Identities=18% Similarity=0.268 Sum_probs=157.2
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..++..++||||+++++ ++.... .+|+|||| .+++|.+++.... .+++..++.++.||+.||.|||++||
T Consensus 58 ~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i 132 (276)
T 2h6d_A 58 IKREIQNLKLFRHPHIIKLYQ-VISTPT---DFFMVMEYVSGGELFDYICKHG-RVEEMEARRLFQQILSAVDYCHRHMV 132 (276)
T ss_dssp HHHHHHHHHTCCCTTBCCEEE-EEECSS---EEEEEEECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHhcCCCCCEeEEEE-EEecCC---eEEEEEeccCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHCCC
Confidence 346778899999999999999 554443 67999999 7899999995543 49999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.++|+|||.+.......
T Consensus 133 ~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~----------------------------------------------- 165 (276)
T 2h6d_A 133 VHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE----------------------------------------------- 165 (276)
T ss_dssp SCCCCCGGGEEECTTSCEEECCCCGGGCCCC-------------------------------------------------
T ss_pred ccCCCChhhEEECCCCCEEEeecccccccCCCc-----------------------------------------------
Confidence 999999999999999999999998874321110
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCC-Cccccchhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYRLGVLL 301 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~-s~~sDIwSLGvll 301 (720)
......||+.|+|||++.+..+ +.++|||||||++
T Consensus 166 --------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l 201 (276)
T 2h6d_A 166 --------------------------------------------FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVIL 201 (276)
T ss_dssp -------------------------------------------------------CCTGGGTTSCCCHHHHHHHHHHHHH
T ss_pred --------------------------------------------ceecccCCccccCHHHHcCCCCCCccchHHHHHHHH
Confidence 0001367999999999988765 6899999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCcccccc-CchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLK-FPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~-~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
|+|++ ||...... .....+.....+ ++.. .+...+|+.+||+.||.+|||+.|+++||||+...
T Consensus 202 ~~l~~g~~p~~~~~~~-~~~~~~~~~~~~--~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h~~~~~~~ 269 (276)
T 2h6d_A 202 YALLCGTLPFDDEHVP-TLFKKIRGGVFY--IPEYLNRSVATLLMHMLQVDPLKRATIKDIREHEWFKQDL 269 (276)
T ss_dssp HHHHHSSCSSCCSSHH-HHHHHHHHCCCC--CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHTTC
T ss_pred HHHHhCCCCCCCCcHH-HHHHHhhcCccc--CchhcCHHHHHHHHHHccCChhhCCCHHHHHhChhhccCc
Confidence 99999 66654433 344444443321 1122 23455999999999999999999999999998753
No 152
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=99.97 E-value=1.6e-32 Score=294.14 Aligned_cols=205 Identities=15% Similarity=0.148 Sum_probs=160.2
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..+|.+++||||+++++ ++.++. .+|+|||| .|++|.+++......+++.+++.++.||+.||.|||++||
T Consensus 97 ~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~i 172 (325)
T 3kul_A 97 FLSEASIMGQFDHPNIIRLEG-VVTRGR---LAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGY 172 (325)
T ss_dssp HHHHHHHHTTCCCTTBCCEEE-EECGGG---CCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHhCCCCCCCcEEE-EEEeCC---ccEEEeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 347888999999999999999 555543 56999999 7999999997666679999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.+||+|||++......... .+
T Consensus 173 vH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~-------------------------------~~------------ 209 (325)
T 3kul_A 173 VHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDA-------------------------------AY------------ 209 (325)
T ss_dssp ECSCCSGGGEEECTTCCEEECCCSSCEECC----C-------------------------------CE------------
T ss_pred eCCCCCcceEEECCCCCEEECCCCcccccccCccc-------------------------------ee------------
Confidence 99999999999999999999999988543211000 00
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......+|+.|+|||++.+..++.++|||||||++|
T Consensus 210 --------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ 245 (325)
T 3kul_A 210 --------------------------------------------TTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMW 245 (325)
T ss_dssp --------------------------------------------ECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHH
T ss_pred --------------------------------------------eccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHH
Confidence 000134688999999999888999999999999999
Q ss_pred hccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 303 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 303 eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
||++ ||...... .....+.....++......+...+|+.+||+.||.+|||+.++++
T Consensus 246 ell~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~ 306 (325)
T 3kul_A 246 EVLAYGERPYWNMTNR-DVISSVEEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVS 306 (325)
T ss_dssp HHHTTSCCTTTTSCHH-HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHcCCCCCcccCCHH-HHHHHHHcCCCCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 9997 66554443 344444444333333333344569999999999999999999986
No 153
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.97 E-value=1.4e-32 Score=285.47 Aligned_cols=204 Identities=15% Similarity=0.171 Sum_probs=161.2
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..++.+++||||+++++ ++.+.. .+|+|||| .+++|.+++......+++..++.++.||+.||.|||++||
T Consensus 52 ~~~E~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i 127 (269)
T 4hcu_A 52 FIEEAEVMMKLSHPKLVQLYG-VCLEQA---PICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACV 127 (269)
T ss_dssp HHHHHHHHHTCCCTTBCCEEE-EECSSS---SEEEEEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhCCCCCEeeEEE-EEecCC---ceEEEEEeCCCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 346888999999999999999 554443 57999999 8999999997666679999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.++|+|||.+........
T Consensus 128 ~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~---------------------------------------------- 161 (269)
T 4hcu_A 128 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY---------------------------------------------- 161 (269)
T ss_dssp CCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHH----------------------------------------------
T ss_pred ecCCcchheEEEcCCCCEEecccccccccccccc----------------------------------------------
Confidence 9999999999999999999999988743211100
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
. ......+|+.|+|||++.+..++.++|||||||++|
T Consensus 162 ------------------------~-------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ 198 (269)
T 4hcu_A 162 ------------------------T-------------------SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMW 198 (269)
T ss_dssp ------------------------H-------------------STTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred ------------------------c-------------------cccCcccccccCCHHHhcCCCCCchhhhHHHHHHHH
Confidence 0 000135688899999999888999999999999999
Q ss_pred hccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004998 303 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 303 eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~h 361 (720)
+|++ ||...... .....+.....+.......+...+|+.+||+.||.+|||+.+++++
T Consensus 199 ~ll~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~ 260 (269)
T 4hcu_A 199 EVFSEGKIPYENRSNS-EVVEDISTGFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQ 260 (269)
T ss_dssp HHHTTSCCTTTTCCHH-HHHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHhcCCCCCCCCCCHH-HHHHHHhcCccCCCCCcCCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence 9998 56554433 4444454443332222234455699999999999999999999873
No 154
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=99.97 E-value=5.8e-33 Score=296.98 Aligned_cols=209 Identities=14% Similarity=0.085 Sum_probs=157.1
Q ss_pred eeeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004998 62 LRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 62 ~r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
.+.++|..+|.+++|||||++++.+.........+|+|||| .+++|.+++... .+++..++.++.||+.||.|||+.
T Consensus 63 ~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~qi~~al~~LH~~ 140 (322)
T 3soc_A 63 WQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKAN--VVSWNELCHIAETMARGLAYLHED 140 (322)
T ss_dssp HHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEEecCCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHhh
Confidence 34556888999999999999999444434334468999999 889999999654 399999999999999999999999
Q ss_pred ----------CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccccccc
Q 004998 141 ----------GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDL 210 (720)
Q Consensus 141 ----------gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Df 210 (720)
||+||||||+|||++.++.+||+|||++.........
T Consensus 141 ~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a~~~~~~~~~--------------------------------- 187 (322)
T 3soc_A 141 IPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSA--------------------------------- 187 (322)
T ss_dssp EEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTCEEECTTSCC---------------------------------
T ss_pred ccccccccCCCEEeCCCChHhEEECCCCeEEEccCCcccccccccCc---------------------------------
Confidence 9999999999999999999999999887432111000
Q ss_pred ccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC----
Q 004998 211 QLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA---- 286 (720)
Q Consensus 211 gla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~---- 286 (720)
.......||+.|+|||++.+.
T Consensus 188 -------------------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~ 212 (322)
T 3soc_A 188 -------------------------------------------------------GDTHGQVGTRRYMAPEVLEGAINFQ 212 (322)
T ss_dssp -------------------------------------------------------CCCTTCCCCGGGCCHHHHTTCCCCC
T ss_pred -------------------------------------------------------cccccCccCccccCHhhcccccccC
Confidence 000114689999999999873
Q ss_pred -CCCccccchhhhhhhhhccc---cCCCCc---------------hHHHHHHHhhcCCCCccccccC------chHHHHH
Q 004998 287 -PVSCASDIYRLGVLLFELFC---PFSTGE---------------EKTRTMSSLRHRVLPPQLLLKF------PKEASFC 341 (720)
Q Consensus 287 -~~s~~sDIwSLGvll~eLlt---pf~~~~---------------~~~~~~~~l~~~~~p~~~~~~~------p~~~~li 341 (720)
.++.++|||||||++|||++ ||.... ........+......+.+...+ +...+||
T Consensus 213 ~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 292 (322)
T 3soc_A 213 RDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETI 292 (322)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHH
T ss_pred cCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCchhhhhhhhhcccCCCCccccccccchHHHHHHHH
Confidence 36778999999999999999 564321 1122222233333333332222 2255999
Q ss_pred HHcCCCCCCCCCChHHHHc
Q 004998 342 LWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 342 ~~~L~~dP~~Rpta~eiL~ 360 (720)
.+||+.||.+|||+.|+++
T Consensus 293 ~~cl~~dP~~Rps~~ell~ 311 (322)
T 3soc_A 293 EECWDHDAEARLSAGCVGE 311 (322)
T ss_dssp HHHTCSSGGGSCCHHHHHH
T ss_pred HHHccCChhhCcCHHHHHH
Confidence 9999999999999999985
No 155
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=99.97 E-value=2.9e-32 Score=287.12 Aligned_cols=207 Identities=15% Similarity=0.198 Sum_probs=161.8
Q ss_pred eehhhhcccCC-CCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 65 HSDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 65 ~~e~~~Ls~l~-HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
.+|..+|.++. ||||+++++ ++.... .+|+|||| .+++|.+++... ..+++..++.++.||+.||.|||++||
T Consensus 71 ~~e~~~l~~l~~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i 145 (298)
T 1phk_A 71 LKEVDILRKVSGHPNIIQLKD-TYETNT---FFFLVFDLMKKGELFDYLTEK-VTLSEKETRKIMRALLEVICALHKLNI 145 (298)
T ss_dssp HHHHHHHHHHTTCTTBCCEEE-EEECSS---EEEEEEECCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHhcCCCCEeeeee-eeccCC---eEEEEEeccCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 36777888885 999999999 555443 68999999 789999999554 349999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.++|+|||.+.......
T Consensus 146 ~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~----------------------------------------------- 178 (298)
T 1phk_A 146 VHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE----------------------------------------------- 178 (298)
T ss_dssp ECSCCSGGGEEECTTCCEEECCCTTCEECCTTC-----------------------------------------------
T ss_pred ccCCCCcceEEEcCCCcEEEecccchhhcCCCc-----------------------------------------------
Confidence 999999999999999999999998874321110
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCcccc------CCCCCccccchh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA------GAPVSCASDIYR 296 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~------~~~~s~~sDIwS 296 (720)
......||+.|+|||++. ...++.++||||
T Consensus 179 --------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~s 214 (298)
T 1phk_A 179 --------------------------------------------KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWS 214 (298)
T ss_dssp --------------------------------------------CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHH
T ss_pred --------------------------------------------ccccccCCccccCHHHhccccccccccCCcccccHh
Confidence 001136799999999985 445899999999
Q ss_pred hhhhhhhccc---cCCCCchHHHHHHHhhcCC--CCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004998 297 LGVLLFELFC---PFSTGEEKTRTMSSLRHRV--LPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 297 LGvll~eLlt---pf~~~~~~~~~~~~l~~~~--~p~~~~~~~-p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
|||++|+|++ ||...... .....+.... ++......+ +...+|+.+||+.||.+|||+.|+|+||||++..
T Consensus 215 lG~~l~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~ 291 (298)
T 1phk_A 215 TGVIMYTLLAGSPPFWHRKQM-LMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQYV 291 (298)
T ss_dssp HHHHHHHHHHSSCSSCCSSHH-HHHHHHHHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCTTC
T ss_pred HHHHHHHHHHCCCCCcCccHH-HHHHHHhcCCcccCcccccccCHHHHHHHHHHccCCcccCCCHHHHHhChHhhhcc
Confidence 9999999999 66655443 2333333322 222222333 4455999999999999999999999999999763
No 156
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=99.97 E-value=3.9e-32 Score=284.78 Aligned_cols=198 Identities=14% Similarity=0.188 Sum_probs=156.4
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG- 141 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g- 141 (720)
..+|..++.+++||||+++++ ++.+.. ++|||| .+++|.+++......+++..++.++.||+.||.|||++|
T Consensus 70 ~~~E~~~l~~l~h~~i~~~~~-~~~~~~-----~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~ 143 (287)
T 4f0f_A 70 FQREVFIMSNLNHPNIVKLYG-LMHNPP-----RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNP 143 (287)
T ss_dssp HHHHHHHHTTCCCTTBCCEEE-EETTTT-----EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTSSS
T ss_pred HHHHHHHHHhCCCCCchhhhe-eecCCC-----eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhCCC
Confidence 347888999999999999999 554442 799999 889999999776667999999999999999999999999
Q ss_pred -ceeccCCCCcEEEccCCc-----eEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccC
Q 004998 142 -IVVHNVRPSCFVMSSFNH-----VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTA 215 (720)
Q Consensus 142 -IvHrDLKP~NILl~~~~~-----vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~ 215 (720)
|+||||||+|||++.++. +||+|||.+......
T Consensus 144 ~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~~~~~~~~----------------------------------------- 182 (287)
T 4f0f_A 144 PIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHS----------------------------------------- 182 (287)
T ss_dssp CCBCSCCSGGGEEESCCCTTCSCCEEECCCTTCBCCSSC-----------------------------------------
T ss_pred CeecCCCCcceEEEeccCCCCceeEEeCCCCcccccccc-----------------------------------------
Confidence 999999999999987776 999888877321100
Q ss_pred CCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCcccc--CCCCCcccc
Q 004998 216 PTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA--GAPVSCASD 293 (720)
Q Consensus 216 ~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~--~~~~s~~sD 293 (720)
.....||+.|+|||++. ...++.++|
T Consensus 183 ----------------------------------------------------~~~~~g~~~y~aPE~~~~~~~~~~~~~D 210 (287)
T 4f0f_A 183 ----------------------------------------------------VSGLLGNFQWMAPETIGAEEESYTEKAD 210 (287)
T ss_dssp ----------------------------------------------------EECCCCCCTTSCGGGSSCSSCEECHHHH
T ss_pred ----------------------------------------------------ccccCCCccccCchhhccCCCCcCchhh
Confidence 01146899999999994 344789999
Q ss_pred chhhhhhhhhccc---cCCCCchH-HHHHHHhhcCCCCccccccCch-HHHHHHHcCCCCCCCCCChHHHHc
Q 004998 294 IYRLGVLLFELFC---PFSTGEEK-TRTMSSLRHRVLPPQLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 294 IwSLGvll~eLlt---pf~~~~~~-~~~~~~l~~~~~p~~~~~~~p~-~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
||||||++|||++ ||...... ......+.....++.+...++. ..+|+.+||+.||.+|||+.++++
T Consensus 211 i~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 282 (287)
T 4f0f_A 211 TYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVK 282 (287)
T ss_dssp HHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCCccccccHHHHHHHHhccCCCCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 9999999999999 67654322 2223333334444444444444 459999999999999999999986
No 157
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=99.97 E-value=1.1e-32 Score=288.41 Aligned_cols=203 Identities=18% Similarity=0.169 Sum_probs=152.3
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++.+++||||+++++ ++... .+|+|||| .+++|.+++......+++..++.++.||+.||.|||++|
T Consensus 62 ~~~~e~~~l~~l~h~~iv~~~~-~~~~~----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ 136 (281)
T 1mp8_A 62 KFLQEALTMRQFDHPHIVKLIG-VITEN----PVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR 136 (281)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEE-EECSS----SCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCccceEEE-EEccC----ccEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3447888999999999999999 44332 46899999 888999999666556999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||++.........
T Consensus 137 i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-------------------------------------------- 172 (281)
T 1mp8_A 137 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY-------------------------------------------- 172 (281)
T ss_dssp CCCSCCSGGGEEEEETTEEEECC---------------------------------------------------------
T ss_pred eecccccHHHEEECCCCCEEECccccccccCccccc--------------------------------------------
Confidence 999999999999999999999999887432111000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......+|+.|+|||++.+..++.++|||||||++
T Consensus 173 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l 207 (281)
T 1mp8_A 173 ---------------------------------------------KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCM 207 (281)
T ss_dssp ---------------------------------------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHH
T ss_pred ---------------------------------------------ccccCCCcccccChhhcccCCCCCccCchHHHHHH
Confidence 00012467899999999988899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||...... .....+.....++......+...+|+.+||+.||.+|||+.++++
T Consensus 208 ~ell~~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~ 269 (281)
T 1mp8_A 208 WEILMHGVKPFQGVKNN-DVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKA 269 (281)
T ss_dssp HHHHTTSCCTTTTCCGG-GHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHhcCCCCCCcCCHH-HHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 99996 66654433 233334433333322233344559999999999999999999985
No 158
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=99.97 E-value=2.1e-32 Score=291.80 Aligned_cols=205 Identities=15% Similarity=0.172 Sum_probs=155.1
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC--CCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK--RSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~--~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
.+|..+|.+++||||+++++ ++.... ...+|+|||| .+++|.+++.... ..+++.+++.++.||+.||.|||++|
T Consensus 55 ~~E~~~l~~l~h~~iv~~~~-~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ 132 (319)
T 4euu_A 55 MREFEVLKKLNHKNIVKLFA-IEEETT-TRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG 132 (319)
T ss_dssp HHHHHHHHHCCCTTBCCEEE-EEECTT-TCCEEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhcCCCCcceEEE-EeecCC-CceEEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 47888999999999999999 444332 2367999999 7899999995432 23899999999999999999999999
Q ss_pred ceeccCCCCcEEE----ccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCC
Q 004998 142 IVVHNVRPSCFVM----SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 142 IvHrDLKP~NILl----~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~ 217 (720)
|+||||||+|||+ +..+.+||+|||++.......
T Consensus 133 ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~~~------------------------------------------ 170 (319)
T 4euu_A 133 IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDE------------------------------------------ 170 (319)
T ss_dssp EECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCTTC------------------------------------------
T ss_pred EecCCCCHHHEEEeccCCCCceEEEccCCCceecCCCC------------------------------------------
Confidence 9999999999999 677789999888874321110
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCcccc--------CCCCC
Q 004998 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA--------GAPVS 289 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~--------~~~~s 289 (720)
......||+.|+|||++. +..++
T Consensus 171 -------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~ 201 (319)
T 4euu_A 171 -------------------------------------------------QFVSLYGTEEYLHPDMYERAVLRKDHQKKYG 201 (319)
T ss_dssp -------------------------------------------------CBCCCCSCGGGCCHHHHHHHTSCCCCCCCBC
T ss_pred -------------------------------------------------ceeecccCCCccCHHHhhhccccccccCCCC
Confidence 001146899999999986 46689
Q ss_pred ccccchhhhhhhhhccc---cCCCC---chHHHHHHHhhcCCCCc-----------------------cccccCc-hHHH
Q 004998 290 CASDIYRLGVLLFELFC---PFSTG---EEKTRTMSSLRHRVLPP-----------------------QLLLKFP-KEAS 339 (720)
Q Consensus 290 ~~sDIwSLGvll~eLlt---pf~~~---~~~~~~~~~l~~~~~p~-----------------------~~~~~~p-~~~~ 339 (720)
.++|||||||++|||++ ||.+. ......+..+..+..+. .+....+ ...+
T Consensus 202 ~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 281 (319)
T 4euu_A 202 ATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTP 281 (319)
T ss_dssp TTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHH
Confidence 99999999999999999 66432 22223333333322211 0111112 2348
Q ss_pred HHHHcCCCCCCCCCChHHHHcCc
Q 004998 340 FCLWLLHPEPSGRPKMGELLQSE 362 (720)
Q Consensus 340 li~~~L~~dP~~Rpta~eiL~hp 362 (720)
|+.+||++||++|||+.|+|+||
T Consensus 282 ll~~~L~~dP~~R~s~~ell~h~ 304 (319)
T 4euu_A 282 VLANILEADQEKCWGFDQFFAET 304 (319)
T ss_dssp HHHHHSCCCTTTSCCHHHHHHHH
T ss_pred HHHHhccCChhhhccHHHhhhcc
Confidence 99999999999999999999987
No 159
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=99.97 E-value=4.1e-33 Score=300.16 Aligned_cols=206 Identities=16% Similarity=0.242 Sum_probs=137.7
Q ss_pred hcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccC
Q 004998 70 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 147 (720)
Q Consensus 70 ~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDL 147 (720)
.+..+.||||+++++.+.........+|+|||| .|++|.+++... ...+++.+++.++.||+.||.|||++||+||||
T Consensus 75 ~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dl 154 (336)
T 3fhr_A 75 HWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDV 154 (336)
T ss_dssp HHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCC
T ss_pred HHHhcCCCChHHHHHHHhhccCCCceEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCC
Confidence 456689999999999433323223458999999 788999999554 346999999999999999999999999999999
Q ss_pred CCCcEEEcc---CCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 148 RPSCFVMSS---FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 148 KP~NILl~~---~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
||+|||++. ++.+||+|||++.......
T Consensus 155 kp~NIll~~~~~~~~~kl~Dfg~~~~~~~~~------------------------------------------------- 185 (336)
T 3fhr_A 155 KPENLLYTSKEKDAVLKLTDFGFAKETTQNA------------------------------------------------- 185 (336)
T ss_dssp SGGGEEESCSSTTCCEEECCCTTCEEC-----------------------------------------------------
T ss_pred CHHHEEEEecCCCceEEEeccccceeccccc-------------------------------------------------
Confidence 999999986 4459999888773221100
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhc
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 304 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eL 304 (720)
.....||+.|+|||++.+..++.++|||||||++|+|
T Consensus 186 -------------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l 222 (336)
T 3fhr_A 186 -------------------------------------------LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYIL 222 (336)
T ss_dssp -------------------------------------------------------------CHHHHHHHHHHHHHHHHHH
T ss_pred -------------------------------------------cccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHH
Confidence 0013679999999999888899999999999999999
Q ss_pred cc---cCCCCchHHH---HHHHhhc--CCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 305 FC---PFSTGEEKTR---TMSSLRH--RVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 305 lt---pf~~~~~~~~---~~~~l~~--~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
++ ||........ ....+.. ..++......+ +...+||.+||++||.+|||+.|+|+||||+..
T Consensus 223 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 294 (336)
T 3fhr_A 223 LCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQS 294 (336)
T ss_dssp HHSSCCC---------------------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTG
T ss_pred HHCCCCCCCccchhhhhhHHHhhhccccccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcCcccccc
Confidence 99 5544322111 0111111 12222222333 444599999999999999999999999999875
No 160
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=99.97 E-value=5.4e-33 Score=295.03 Aligned_cols=215 Identities=14% Similarity=0.157 Sum_probs=156.4
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++||||+++++ ++.++. .+++|||| .|++|.+++......+++.+++.++.||+.||.|||++|
T Consensus 53 ~~~~E~~~l~~l~hp~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ 128 (310)
T 3s95_A 53 TFLKEVKVMRCLEHPNVLKFIG-VLYKDK---RLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMN 128 (310)
T ss_dssp HHHHHHHHHTTCCCTTBCCEEE-EEEETT---EEEEEEECCTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCcCcccEEE-EEecCC---eeEEEEEecCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3447888999999999999999 554443 58999999 899999999765666999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||.+........... +....
T Consensus 129 ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~-------------------------------~~~~~------ 171 (310)
T 3s95_A 129 IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPE-------------------------------GLRSL------ 171 (310)
T ss_dssp EECSCCSTTSEEECTTSCEEECCCTTCEECC-------------------------------------------------
T ss_pred ccCCCCCcCeEEECCCCCEEEeecccceeccccccccc-------------------------------ccccc------
Confidence 99999999999999999999999998854422210000 00000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
............||+.|+|||++.+..++.++|||||||++
T Consensus 172 ---------------------------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l 212 (310)
T 3s95_A 172 ---------------------------------------KKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVL 212 (310)
T ss_dssp -----------------------------------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHH
T ss_pred ---------------------------------------cccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHH
Confidence 00000001125799999999999999999999999999999
Q ss_pred hhccc---cCCCCchHH----HHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 302 FELFC---PFSTGEEKT----RTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~----~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||....... ...........++. ..+...+|+.+||+.||.+|||+.++++
T Consensus 213 ~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~li~~~l~~dP~~Rps~~~l~~ 275 (310)
T 3s95_A 213 CEIIGRVNADPDYLPRTMDFGLNVRGFLDRYCPPN---CPPSFFPITVRCCDLDPEKRPSFVKLEH 275 (310)
T ss_dssp HHHHHTCCSSTTTSCBCTTSSBCHHHHHHHTCCTT---CCTTHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHhcCCCCCcchhhhHHHHhhhhhccccccCCCC---CCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 99998 443221100 00001111111221 2244569999999999999999999986
No 161
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=99.97 E-value=2.5e-32 Score=283.26 Aligned_cols=203 Identities=15% Similarity=0.172 Sum_probs=159.2
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..++.+++||||+++++ ++.+.. .+++|||| .+++|.+++......+++.+++.++.||+.||.|||++||+
T Consensus 51 ~~E~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~ 126 (268)
T 3sxs_A 51 FQEAQTMMKLSHPKLVKFYG-VCSKEY---PIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFI 126 (268)
T ss_dssp HHHHHHHHHCCCTTBCCEEE-EECSSS---SEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHhCCCCCEeeEEE-EEccCC---ceEEEEEccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 46778999999999999999 554443 57999999 79999999966555699999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+||+++.++.++|+|||.+.........
T Consensus 127 H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~---------------------------------------------- 160 (268)
T 3sxs_A 127 HRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYV---------------------------------------------- 160 (268)
T ss_dssp ESSCSGGGEEECTTCCEEECCTTCEEECCTTCEE----------------------------------------------
T ss_pred cCCcCcceEEECCCCCEEEccCccceecchhhhh----------------------------------------------
Confidence 9999999999999999999999887432111000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......+|+.|+|||++.+..++.++|||||||++||
T Consensus 161 -------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ 197 (268)
T 3sxs_A 161 -------------------------------------------SSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWE 197 (268)
T ss_dssp -------------------------------------------ECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHH
T ss_pred -------------------------------------------cccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHH
Confidence 0001346788999999998889999999999999999
Q ss_pred ccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004998 304 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 304 Llt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~h 361 (720)
|++ ||....... ....+.....+.......+...+|+.+||+.||.+|||+.+++++
T Consensus 198 l~~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~ 258 (268)
T 3sxs_A 198 VFSLGKMPYDLYTNSE-VVLKVSQGHRLYRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSS 258 (268)
T ss_dssp HHTTTCCTTTTSCHHH-HHHHHHTTCCCCCCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred HHcCCCCCccccChHH-HHHHHHcCCCCCCCCcChHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 997 666554443 333333332222222233445699999999999999999999973
No 162
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=99.97 E-value=1.6e-32 Score=297.19 Aligned_cols=208 Identities=20% Similarity=0.224 Sum_probs=161.1
Q ss_pred eeeehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCC------------------------
Q 004998 63 RKHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKR------------------------ 116 (720)
Q Consensus 63 r~~~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~------------------------ 116 (720)
+..+|..+|.++ +|||||++++ ++.... ..+++|||| .|++|.+++.....
T Consensus 71 ~~~~E~~~l~~l~~hpniv~~~~-~~~~~~--~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (359)
T 3vhe_A 71 ALMSELKILIHIGHHLNVVNLLG-ACTKPG--GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPV 147 (359)
T ss_dssp HHHHHHHHHHHHCCCTTBCCEEE-EECSTT--SCCEEEEECCTTEEHHHHHHTTTTSBCSCC------------------
T ss_pred HHHHHHHHHHhhcCCcceeeeee-eeecCC--CceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccch
Confidence 344788889998 8999999999 444432 247999999 89999999954322
Q ss_pred -----------------------------------------CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEc
Q 004998 117 -----------------------------------------SVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMS 155 (720)
Q Consensus 117 -----------------------------------------~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~ 155 (720)
.+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~ 227 (359)
T 3vhe_A 148 DLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS 227 (359)
T ss_dssp ------------------------------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC
T ss_pred hhhccccccCccccccccccccccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEc
Confidence 289999999999999999999999999999999999999
Q ss_pred cCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccCCCccccc
Q 004998 156 SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTH 235 (720)
Q Consensus 156 ~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~ 235 (720)
.++.+||+|||++....... +.
T Consensus 228 ~~~~~kl~Dfg~a~~~~~~~---------------------------------~~------------------------- 249 (359)
T 3vhe_A 228 EKNVVKICDFGLARDIYKDP---------------------------------DY------------------------- 249 (359)
T ss_dssp GGGCEEECCCGGGSCTTSCT---------------------------------TC-------------------------
T ss_pred CCCcEEEEeccceeeecccc---------------------------------cc-------------------------
Confidence 99999999998884331110 00
Q ss_pred cccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhccc----cCCCC
Q 004998 236 VVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC----PFSTG 311 (720)
Q Consensus 236 ~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt----pf~~~ 311 (720)
.......||+.|+|||++.+..++.++|||||||++|||++ ||...
T Consensus 250 ------------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~ 299 (359)
T 3vhe_A 250 ------------------------------VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 299 (359)
T ss_dssp ------------------------------EEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred ------------------------------hhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCcc
Confidence 00011467999999999998889999999999999999997 66655
Q ss_pred chHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004998 312 EEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 312 ~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~h 361 (720)
.........+.....++......+...+|+.+||++||.+|||+.|+++|
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~ 349 (359)
T 3vhe_A 300 KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 349 (359)
T ss_dssp CCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred chhHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHH
Confidence 44444444555443333333334556699999999999999999999873
No 163
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=99.97 E-value=1.1e-32 Score=290.40 Aligned_cols=209 Identities=16% Similarity=0.100 Sum_probs=155.0
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++||||+++++.++..+. ..+++|||| .+++|.+++......+++..++.++.||+.||.|||++|
T Consensus 57 ~~~~E~~~l~~l~h~~iv~~~~~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ 134 (295)
T 3ugc_A 57 DFEREIEILKSLQHDNIVKYKGVCYSAGR--RNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR 134 (295)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEEEECHHHH--TSCEEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCEeeEEEEEecCCC--CceEEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcCC
Confidence 34478889999999999999994333221 247999999 799999999665556999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||++...+..... +
T Consensus 135 ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~--------------------------------~----------- 171 (295)
T 3ugc_A 135 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEF--------------------------------F----------- 171 (295)
T ss_dssp CCCSCCSGGGEEEEETTEEEECCCCSCC----------------------------------------------------
T ss_pred cccCCCCHhhEEEcCCCeEEEccCcccccccCCcce--------------------------------e-----------
Confidence 999999999999999999999999988543211000 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
.......||+.|+|||++.+..++.++|||||||++
T Consensus 172 --------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l 207 (295)
T 3ugc_A 172 --------------------------------------------KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVL 207 (295)
T ss_dssp ------------------------------------------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred --------------------------------------------eeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHH
Confidence 000113567889999999988899999999999999
Q ss_pred hhcccc---CCCCchH---------------HHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 302 FELFCP---FSTGEEK---------------TRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLltp---f~~~~~~---------------~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||+++ |...... ......+.....++......+...+|+.+||+.||.+|||+.|+++
T Consensus 208 ~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~ 284 (295)
T 3ugc_A 208 YELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL 284 (295)
T ss_dssp HHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHHhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 999993 3221110 0122222222222222223344559999999999999999999985
No 164
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=99.97 E-value=2.6e-32 Score=286.43 Aligned_cols=207 Identities=18% Similarity=0.197 Sum_probs=161.3
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++.+++||||+++++ ++.... .+|++||| .+++|.+++.... .+++.+++.++.||+.||.|||++|
T Consensus 67 ~~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH~~~ 141 (287)
T 2wei_A 67 TILREVELLKKLDHPNIMKLFE-ILEDSS---SFYIVGELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMHKHN 141 (287)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEE-EEECSS---EEEEEECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhccCCCccEEEE-EEeCCC---eEEEEEEccCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3447788999999999999999 554443 67999999 8999999985433 4999999999999999999999999
Q ss_pred ceeccCCCCcEEEccC---CceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCC
Q 004998 142 IVVHNVRPSCFVMSSF---NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 142 IvHrDLKP~NILl~~~---~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
|+||||||+||+++.+ +.+||+|||.+.......
T Consensus 142 i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~------------------------------------------- 178 (287)
T 2wei_A 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT------------------------------------------- 178 (287)
T ss_dssp CCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCCS-------------------------------------------
T ss_pred eeccCCChhhEEEecCCCcccEEEeccCcceeecCCC-------------------------------------------
Confidence 9999999999999754 469998888774321110
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhh
Q 004998 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
......||+.|+|||++.+. ++.++||||||
T Consensus 179 ------------------------------------------------~~~~~~~~~~y~aPE~~~~~-~~~~~Di~slG 209 (287)
T 2wei_A 179 ------------------------------------------------KMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAG 209 (287)
T ss_dssp ------------------------------------------------SCSCHHHHHTTCCHHHHTTC-CCTHHHHHHHH
T ss_pred ------------------------------------------------ccccccCcccccChHHhcCC-CCCchhhHhHH
Confidence 00013578999999999765 89999999999
Q ss_pred hhhhhccc---cCCCCchHHHHHHHhhcCCCCcc---ccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 299 VLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQ---LLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~---~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|++|+|++ ||...... .....+..+..+.. .....+...+||.+||++||.+|||+.|+|+||||++.
T Consensus 210 ~~l~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~~~~~ 283 (287)
T 2wei_A 210 VILYILLSGTPPFYGKNEY-DILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKY 283 (287)
T ss_dssp HHHHHHHHSSCSSCCSSHH-HHHHHHHHCCCCCCSGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHHH
T ss_pred HHHHHHHhCCCCCCCCCHH-HHHHHHHcCCCCCCchhhhhcCHHHHHHHHHHcccChhhCcCHHHHhcCHHHhcc
Confidence 99999999 66655443 34444444433222 22233445699999999999999999999999999764
No 165
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=99.97 E-value=4.3e-32 Score=297.32 Aligned_cols=205 Identities=19% Similarity=0.227 Sum_probs=153.7
Q ss_pred ehhhhcccCC-CC-----CceecccceeecCCCCCcEEEEEecCCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHH
Q 004998 66 SDGVELTHGD-HL-----RNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 66 ~e~~~Ls~l~-Hp-----nIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
+|..++..+. |+ +|+++++ ++.... .+|+||||.+++|.+++... ...+++..++.++.||+.||.|||
T Consensus 99 ~e~~~l~~l~~~~~~~~~~iv~~~~-~~~~~~---~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH 174 (382)
T 2vx3_A 99 IEVRLLELMNKHDTEMKYYIVHLKR-HFMFRN---HLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLA 174 (382)
T ss_dssp HHHHHHHHHHHCSSGGGGGBCCEEE-EEEETT---EEEEEEECCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcccccceeEEEeee-eeccCC---ceEEEEecCCCCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhc
Confidence 4555666554 44 4888888 444443 68999999777999999543 345999999999999999999999
Q ss_pred --HcCceeccCCCCcEEEc--cCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccccccccccc
Q 004998 139 --SQGIVVHNVRPSCFVMS--SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVT 214 (720)
Q Consensus 139 --s~gIvHrDLKP~NILl~--~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~ 214 (720)
..|||||||||+|||++ .++.+||+|||++...+..
T Consensus 175 ~~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~~~~~---------------------------------------- 214 (382)
T 2vx3_A 175 TPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQR---------------------------------------- 214 (382)
T ss_dssp STTTCEECCCCSGGGEEESSTTSCCEEECCCTTCEETTCC----------------------------------------
T ss_pred cCCCCEEcCCCCcccEEEecCCCCcEEEEeccCceecccc----------------------------------------
Confidence 57999999999999995 4778999988887432111
Q ss_pred CCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccc
Q 004998 215 APTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDI 294 (720)
Q Consensus 215 ~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDI 294 (720)
....+||+.|+|||++.+..++.++||
T Consensus 215 -----------------------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~Di 241 (382)
T 2vx3_A 215 -----------------------------------------------------IYQYIQSRFYRSPEVLLGMPYDLAIDM 241 (382)
T ss_dssp -----------------------------------------------------CCSSCSCGGGCCHHHHTTCCCCTHHHH
T ss_pred -----------------------------------------------------cccccCCccccChHHHcCCCCCcHHHH
Confidence 011468999999999999999999999
Q ss_pred hhhhhhhhhccc---cCCCCchHHHHHHHhhc-CCCCcccccc-------------------------------------
Q 004998 295 YRLGVLLFELFC---PFSTGEEKTRTMSSLRH-RVLPPQLLLK------------------------------------- 333 (720)
Q Consensus 295 wSLGvll~eLlt---pf~~~~~~~~~~~~l~~-~~~p~~~~~~------------------------------------- 333 (720)
|||||++|||++ ||............+.. +..++.....
T Consensus 242 wSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 321 (382)
T 2vx3_A 242 WSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLH 321 (382)
T ss_dssp HHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTCTTHHHHEEECTTSCEEECCCCTTCCCSCCTTCSCHH
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhHHHHHHHHhccccccccccccccccccCCcchhhHH
Confidence 999999999999 77765544332222221 1111110000
Q ss_pred ------------------------CchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 334 ------------------------FPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 334 ------------------------~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
.+...+||.+||++||++|||+.|+|+||||+..
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~Rpta~e~L~hp~f~~~ 379 (382)
T 2vx3_A 322 NILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKKT 379 (382)
T ss_dssp HHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGCC-
T ss_pred HHhhccccCCCccccccccccchhhHHHHHHHHHhcCCChhhCCCHHHHhcCcccccC
Confidence 0134699999999999999999999999999875
No 166
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=99.97 E-value=1.2e-31 Score=283.50 Aligned_cols=214 Identities=16% Similarity=0.188 Sum_probs=162.0
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..++.+++||||+++++.++ .. ....+|+||||..++|.+++.. ....+++..++.++.||+.||.|||++||
T Consensus 53 ~~~E~~~l~~l~h~~i~~~~~~~~-~~-~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i 130 (305)
T 2wtk_C 53 VKKEIQLLRRLRHKNVIQLVDVLY-NE-EKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGI 130 (305)
T ss_dssp HHHHHHHHTTCCCTTBCCEEEEEE-CC----CEEEEEECCSEEHHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHhcCCCCeeEEEEEEE-cC-CCCeEEEEehhccCCHHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 347788999999999999999433 22 2236899999955668888843 34569999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.++|+|||.+.........
T Consensus 131 ~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~--------------------------------------------- 165 (305)
T 2wtk_C 131 VHKDIKPGNLLLTTGGTLKISALGVAEALHPFAAD--------------------------------------------- 165 (305)
T ss_dssp ECSCCSGGGEEECTTCCEEECCCTTCEECCTTCSS---------------------------------------------
T ss_pred eecCCCcccEEEcCCCcEEeeccccccccCccccc---------------------------------------------
Confidence 99999999999999999999999887432111000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC--CCccccchhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP--VSCASDIYRLGVL 300 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~--~s~~sDIwSLGvl 300 (720)
.......||+.|+|||++.+.. ++.++|||||||+
T Consensus 166 -------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~i 202 (305)
T 2wtk_C 166 -------------------------------------------DTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVT 202 (305)
T ss_dssp -------------------------------------------CEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHH
T ss_pred -------------------------------------------cccccCCCCCCCcChhhccCcccCCcchhhHHHHHHH
Confidence 0001136899999999998754 4789999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004998 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
+|||++ ||...... .....+.....+ ......+...+||.+||+.||.+|||+.|+++||||+....
T Consensus 203 l~~l~~g~~p~~~~~~~-~~~~~i~~~~~~-~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~~ 272 (305)
T 2wtk_C 203 LYNITTGLYPFEGDNIY-KLFENIGKGSYA-IPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKHP 272 (305)
T ss_dssp HHHHHHSSCSCCCSSHH-HHHHHHHHCCCC-CCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHSHHHHSCCC
T ss_pred HHHHHhCCCCCCCchHH-HHHHHHhcCCCC-CCCccCHHHHHHHHHHccCChhhCCCHHHHhcCcccccCCC
Confidence 999999 67654433 344444443221 11122344559999999999999999999999999987644
No 167
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=99.97 E-value=2.1e-32 Score=293.20 Aligned_cols=204 Identities=15% Similarity=0.117 Sum_probs=159.6
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++++++||||+++++ ++... ..++++|| .+++|.+++......+++..++.|+.||+.||.|||++|
T Consensus 63 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~----~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ 137 (327)
T 3poz_A 63 EILDEAYVMASVDNPHVCRLLG-ICLTS----TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 137 (327)
T ss_dssp HHHHHHHHHHHCCBTTBCCEEE-EEESS----SEEEEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCEeEEEE-EEecC----CeEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence 3447888999999999999999 55543 36788888 999999999766666999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||+++..+.....
T Consensus 138 ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~-------------------------------------------- 173 (327)
T 3poz_A 138 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE-------------------------------------------- 173 (327)
T ss_dssp CCCSCCCGGGEEEEETTEEEECCTTHHHHHTTTCC---------------------------------------------
T ss_pred eeCCCCChheEEECCCCCEEEccCcceeEccCCccc--------------------------------------------
Confidence 999999999999999999999999887432211000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
.......||+.|+|||++.+..++.++|||||||++
T Consensus 174 --------------------------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il 209 (327)
T 3poz_A 174 --------------------------------------------YHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTV 209 (327)
T ss_dssp --------------------------------------------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred --------------------------------------------ccccCCCccccccChHHhccCCCCchhhhhhhHHHH
Confidence 000113568899999999999999999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||...... .....+.....++......+...+|+.+||+.||.+||++.++++
T Consensus 210 ~ellt~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~ 271 (327)
T 3poz_A 210 WELMTFGSKPYDGIPAS-EISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELII 271 (327)
T ss_dssp HHHHTTSCCTTTTCCGG-GHHHHHHTTCCCCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHH
T ss_pred HHHHhcCCCCccCCCHH-HHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 99998 56554332 233334433333333334455669999999999999999999986
No 168
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=99.97 E-value=3.8e-32 Score=284.24 Aligned_cols=203 Identities=16% Similarity=0.207 Sum_probs=160.0
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..++.+++||||+++++ ++.+.. .+|+|||| .+++|.+++......+++.+++.++.||+.||.|||++||+
T Consensus 67 ~~E~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~ 142 (283)
T 3gen_A 67 IEEAKVMMNLSHEKLVQLYG-VCTKQR---PIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFL 142 (283)
T ss_dssp HHHHHHHHTCCCTTBCCEEE-EECSSS---SEEEEECCCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHhcCCCCCEeeEEE-EEecCC---CeEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 36788999999999999999 554443 57999999 79999999976555699999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+||+++.++.++|+|||.+........
T Consensus 143 H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~----------------------------------------------- 175 (283)
T 3gen_A 143 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY----------------------------------------------- 175 (283)
T ss_dssp CSSCSGGGEEECTTSCEEECSTTGGGGBCCHHH-----------------------------------------------
T ss_pred CCCCccceEEEcCCCCEEEcccccccccccccc-----------------------------------------------
Confidence 999999999999999999999988743211100
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
. ......+|+.|+|||++.+..++.++|||||||++||
T Consensus 176 -----------------------~-------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~ 213 (283)
T 3gen_A 176 -----------------------T-------------------SSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWE 213 (283)
T ss_dssp -----------------------H-------------------STTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHH
T ss_pred -----------------------c-------------------cccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHH
Confidence 0 0001346888999999998889999999999999999
Q ss_pred ccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004998 304 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 304 Llt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~h 361 (720)
|++ ||...... .....+.....+.......+...+|+.+||+.||.+|||+.++++|
T Consensus 214 l~t~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~ 274 (283)
T 3gen_A 214 IYSLGKMPYERFTNS-ETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSN 274 (283)
T ss_dssp HHTTTCCTTTTSCHH-HHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred HHhCCCCCccccChh-HHHHHHhcccCCCCCCcCCHHHHHHHHHHccCChhHCcCHHHHHHH
Confidence 997 66655443 3344444433222222233455699999999999999999999863
No 169
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=99.97 E-value=3.2e-32 Score=282.73 Aligned_cols=199 Identities=17% Similarity=0.213 Sum_probs=153.1
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG- 141 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g- 141 (720)
..+|..++..++||||+++++ ++.... .+|+|||| .|++|.+++.. ..+++..++.++.||+.||.|||++|
T Consensus 53 ~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~i~~~l~~~l~~lH~~~~ 126 (271)
T 3dtc_A 53 VRQEAKLFAMLKHPNIIALRG-VCLKEP---NLCLVMEFARGGPLNRVLSG--KRIPPDILVNWAVQIARGMNYLHDEAI 126 (271)
T ss_dssp HHHHHHHHHHCCCTTBCCEEE-EECCC-----CEEEEECCTTEEHHHHHTS--SCCCHHHHHHHHHHHHHHHHHHHHSSS
T ss_pred HHHHHHHHHhcCCCCEeeEEE-EEecCC---ceEEEEEcCCCCCHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhCCC
Confidence 346778899999999999999 555443 46999999 89999999953 34999999999999999999999999
Q ss_pred --ceeccCCCCcEEEcc--------CCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccc
Q 004998 142 --IVVHNVRPSCFVMSS--------FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQ 211 (720)
Q Consensus 142 --IvHrDLKP~NILl~~--------~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfg 211 (720)
|+||||||+|||++. ++.++|+|||.+.......
T Consensus 127 ~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~------------------------------------ 170 (271)
T 3dtc_A 127 VPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTT------------------------------------ 170 (271)
T ss_dssp SCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC--------------------------------------------
T ss_pred CceeecCCchHHEEEecccccccccCcceEEccCCccccccccc------------------------------------
Confidence 899999999999985 6789998888773321100
Q ss_pred cccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCcc
Q 004998 212 LVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCA 291 (720)
Q Consensus 212 la~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~ 291 (720)
.....||+.|+|||++.+..++.+
T Consensus 171 --------------------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~ 194 (271)
T 3dtc_A 171 --------------------------------------------------------KMSAAGAYAWMAPEVIRASMFSKG 194 (271)
T ss_dssp -------------------------------------------------------------CCGGGSCHHHHHHCCCSHH
T ss_pred --------------------------------------------------------ccCCCCccceeCHHHhccCCCCch
Confidence 001367999999999998889999
Q ss_pred ccchhhhhhhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcC
Q 004998 292 SDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 292 sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~h 361 (720)
+|||||||++|+|++ ||............... .........++ ...+|+.+||+.||.+|||+.|++++
T Consensus 195 ~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 267 (271)
T 3dtc_A 195 SDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMN-KLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQ 267 (271)
T ss_dssp HHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHTS-CCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred hhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhhcC-CCCCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHH
Confidence 999999999999999 77665554333333333 33333334444 45599999999999999999999863
No 170
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=99.97 E-value=4.4e-32 Score=292.29 Aligned_cols=204 Identities=15% Similarity=0.191 Sum_probs=151.3
Q ss_pred ehhhhcccCCCCC------ceecccceeecCCCCCcEEEEEecCCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHH
Q 004998 66 SDGVELTHGDHLR------NQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 66 ~e~~~Ls~l~Hpn------IV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
+|..++.++.|++ |+.+++ ++.... .+|+||||.+++|.+++.. ....+++.+++.++.||+.||.|||
T Consensus 65 ~E~~~l~~l~~~~~~~~~~~~~~~~-~~~~~~---~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH 140 (355)
T 2eu9_A 65 LEINVLKKIKEKDKENKFLCVLMSD-WFNFHG---HMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLH 140 (355)
T ss_dssp HHHHHHHHHHHHCTTSCSCBCCEEE-EEEETT---EEEEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhcCCCCceeEEEeee-eeeeCC---eEEEEEeccCCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 5666777777666 888888 454443 6899999988888888844 3356999999999999999999999
Q ss_pred HcCceeccCCCCcEEEc-------------------cCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhH
Q 004998 139 SQGIVVHNVRPSCFVMS-------------------SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDML 199 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~-------------------~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (720)
++||+||||||+|||+. .++.+||+|||++
T Consensus 141 ~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~------------------------------- 189 (355)
T 2eu9_A 141 ENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA------------------------------- 189 (355)
T ss_dssp TTTEECCCCCGGGEEESCCCEEEEECCC-CCCEEEESCCCEEECCCTTC-------------------------------
T ss_pred HCCcccCCCCHHHEEEecccccccccccccccccccCCCcEEEeecCcc-------------------------------
Confidence 99999999999999994 4455666555554
Q ss_pred hhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccC
Q 004998 200 QRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYAS 279 (720)
Q Consensus 200 ~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~A 279 (720)
+..... .....||+.|+|
T Consensus 190 --------------~~~~~~------------------------------------------------~~~~~gt~~y~a 207 (355)
T 2eu9_A 190 --------------TFDHEH------------------------------------------------HTTIVATRHYRP 207 (355)
T ss_dssp --------------EETTSC------------------------------------------------CCSSCSCGGGCC
T ss_pred --------------cccccc------------------------------------------------ccCCcCCCcccC
Confidence 211000 011468999999
Q ss_pred CccccCCCCCccccchhhhhhhhhccc---cCCCCchHHH--HHHHhhcCCCCccccc----------------------
Q 004998 280 PEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTR--TMSSLRHRVLPPQLLL---------------------- 332 (720)
Q Consensus 280 PE~l~~~~~s~~sDIwSLGvll~eLlt---pf~~~~~~~~--~~~~l~~~~~p~~~~~---------------------- 332 (720)
||++.+..++.++|||||||++|||++ ||........ .+..+. +.+|..+..
T Consensus 208 PE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (355)
T 2eu9_A 208 PEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKIL-GPIPSHMIHRTRKQKYFYKGGLVWDENSSDG 286 (355)
T ss_dssp HHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHH-CCCCHHHHHHCSCGGGEETTEECCCTTSHHH
T ss_pred CeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHc-CCCcHHHhhhccchhhhcccccccccccchh
Confidence 999999889999999999999999999 6665543321 111211 222221100
Q ss_pred -------------------cCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 333 -------------------KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 333 -------------------~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
..+...+||.+||++||.+|||+.|+|+||||+..
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~ 340 (355)
T 2eu9_A 287 RYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGL 340 (355)
T ss_dssp HHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGGC
T ss_pred ccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHhcChhhcCC
Confidence 01234599999999999999999999999999986
No 171
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=99.97 E-value=1.7e-32 Score=298.46 Aligned_cols=212 Identities=10% Similarity=0.086 Sum_probs=155.9
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCceec
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 145 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHr 145 (720)
.+...+..++||||+++++.+..........|+||||.|++|.+++......+++.+++.|+.||+.||.|||++||+||
T Consensus 97 ~e~~~~~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHr 176 (364)
T 3op5_A 97 QKWIRTRKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRFGSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHG 176 (364)
T ss_dssp HHHHHHTTCSCCCSCCEEEEEEEEETTEEEEEEEEECEEEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECC
T ss_pred HHHHHHhhccCCCCCeEEeeeeeccCCcceEEEEEeCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeEEe
Confidence 34456788999999999995555444344689999999999999997665679999999999999999999999999999
Q ss_pred cCCCCcEEEc--cCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 146 NVRPSCFVMS--SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 146 DLKP~NILl~--~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||+|||++ .++.+||+|||+++........ ..+
T Consensus 177 Dlkp~Nill~~~~~~~~kl~DFG~a~~~~~~~~~------------------------------~~~------------- 213 (364)
T 3op5_A 177 DIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVH------------------------------KAY------------- 213 (364)
T ss_dssp CCCGGGEEEESSCTTCEEECCCTTCEESSGGGCC------------------------------CCS-------------
T ss_pred cCCHHHEEEecCCCCeEEEEECCcceecccCCcc------------------------------ccc-------------
Confidence 9999999999 8899999999988543211000 000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
.........||+.|+|||++.+..++.++|||||||++||
T Consensus 214 ----------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~e 253 (364)
T 3op5_A 214 ----------------------------------------AADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQ 253 (364)
T ss_dssp ----------------------------------------SCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHH
T ss_pred ----------------------------------------ccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHH
Confidence 0000012468999999999999999999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhc---CCCCccc-----cccCc-hHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 304 LFC---PFSTGEEKTRTMSSLRH---RVLPPQL-----LLKFP-KEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~---~~~p~~~-----~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|++ ||............... ..++..+ ...+| ...+|+.+||+.||.+||++.+|++
T Consensus 254 l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~ 322 (364)
T 3op5_A 254 WLTGHLPWEDNLKDPKYVRDSKIRYRENIASLMDKCFPAANAPGEIAKYMETVKLLDYTEKPLYENLRD 322 (364)
T ss_dssp HHHSCCTTGGGTTCHHHHHHHHHHHHHCHHHHHHHHSCTTCCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred HHhCCCCccccccCHHHHHHHHHHhhhhHHHHHHHhcccccCHHHHHHHHHHHhcCCCCCCCCHHHHHH
Confidence 999 66542111111111110 0111100 02233 4459999999999999999999875
No 172
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=99.97 E-value=2.4e-32 Score=290.30 Aligned_cols=206 Identities=16% Similarity=0.185 Sum_probs=153.5
Q ss_pred hhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHc-Cceec
Q 004998 67 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ-GIVVH 145 (720)
Q Consensus 67 e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~-gIvHr 145 (720)
+..++..++||||+++++ ++.... .+|+||||.++.+..++......+++..++.++.||+.||.|||++ ||+||
T Consensus 74 ~~~~~~~~~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~ 149 (318)
T 2dyl_A 74 LDVVLKSHDCPYIVQCFG-TFITNT---DVFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHR 149 (318)
T ss_dssp HHHHHHTTTCTTBCCEEE-EEECSS---EEEEEECCCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_pred HHHHHHhcCCCceeeEEE-EEecCC---cEEEEEeccCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeC
Confidence 334677899999999999 554443 6899999987777776654445699999999999999999999995 99999
Q ss_pred cCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccccc
Q 004998 146 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 225 (720)
Q Consensus 146 DLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~ 225 (720)
||||+||+++.++.+||+|||.+.......
T Consensus 150 dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~-------------------------------------------------- 179 (318)
T 2dyl_A 150 DVKPSNILLDERGQIKLCDFGISGRLVDDK-------------------------------------------------- 179 (318)
T ss_dssp CCCGGGEEECTTSCEEECCCTTC---------------------------------------------------------
T ss_pred CCCHHHEEECCCCCEEEEECCCchhccCCc--------------------------------------------------
Confidence 999999999999999999998873321100
Q ss_pred ccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCcccc-----CCCCCccccchhhhhh
Q 004998 226 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-----GAPVSCASDIYRLGVL 300 (720)
Q Consensus 226 ~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~-----~~~~s~~sDIwSLGvl 300 (720)
......||+.|+|||++. +..++.++|||||||+
T Consensus 180 -----------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~i 218 (318)
T 2dyl_A 180 -----------------------------------------AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGIS 218 (318)
T ss_dssp ------------------------------------------------CCTTCCHHHHC--------CCTHHHHHHHHHH
T ss_pred -----------------------------------------cccccCCCccccChhhcccccccccCCccccchhhHHHH
Confidence 000136799999999995 4458999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCcc--ccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQ--LLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p~~--~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
+|||++ ||.........+..+.....+.. .....+...+||.+||+.||.+||++.++++||||+..
T Consensus 219 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~ 290 (318)
T 2dyl_A 219 LVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIKRY 290 (318)
T ss_dssp HHHHHHSSCTTTTCCSHHHHHHHHHHSCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHHH
T ss_pred HHHHHhCCCCCCCCCccHHHHHHHhccCCCCCCccCCCCHHHHHHHHHHccCChhHCcCHHHHhhCHHHHhc
Confidence 999999 77654444344444443322211 11223455699999999999999999999999999754
No 173
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=99.97 E-value=3.2e-32 Score=291.43 Aligned_cols=202 Identities=15% Similarity=0.142 Sum_probs=158.6
Q ss_pred eeeehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC---------------CCCCHHHHHH
Q 004998 63 RKHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---------------RSVDVYECLH 125 (720)
Q Consensus 63 r~~~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~---------------~~l~~~~~~~ 125 (720)
+..+|..+|.++ +||||+++++ ++.+.. .+|+|||| .+++|.+++.... ..+++.+++.
T Consensus 71 ~~~~E~~~l~~l~~hp~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (327)
T 1fvr_A 71 DFAGELEVLCKLGHHPNIINLLG-ACEHRG---YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLH 146 (327)
T ss_dssp HHHHHHHHHTTCCCCTTBCCEEE-EEEETT---EEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHH
T ss_pred HHHHHHHHHHhccCCCchhhhce-eeeeCC---ceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHH
Confidence 344688899999 9999999999 555443 68999999 7999999996543 3699999999
Q ss_pred HHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcc
Q 004998 126 IFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRL 205 (720)
Q Consensus 126 i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 205 (720)
++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 147 i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kL~Dfg~~~~~~~~~------------------------------ 196 (327)
T 1fvr_A 147 FAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYV------------------------------ 196 (327)
T ss_dssp HHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEESSCEEC------------------------------
T ss_pred HHHHHHHHHHHHHhCCccCCCCccceEEEcCCCeEEEcccCcCccccccc------------------------------
Confidence 99999999999999999999999999999999999999998873210000
Q ss_pred cccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC
Q 004998 206 RREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG 285 (720)
Q Consensus 206 ~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 285 (720)
......+|+.|+|||++.+
T Consensus 197 -------------------------------------------------------------~~~~~~~~~~y~aPE~~~~ 215 (327)
T 1fvr_A 197 -------------------------------------------------------------KKTMGRLPVRWMAIESLNY 215 (327)
T ss_dssp -------------------------------------------------------------CC----CCTTTCCHHHHHH
T ss_pred -------------------------------------------------------------cccCCCCCccccChhhhcc
Confidence 0001246889999999988
Q ss_pred CCCCccccchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 286 APVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 286 ~~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
..++.++|||||||++|||++ ||...... .....+.....++......+...+||.+||..||.+|||+.++++
T Consensus 216 ~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 293 (327)
T 1fvr_A 216 SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA-ELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILV 293 (327)
T ss_dssp CEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-HHHHHGGGTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred ccCCchhcchHHHHHHHHHHcCCCCCCCCCcHH-HHHHHhhcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 889999999999999999997 56554433 444455544333333333445569999999999999999999986
No 174
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=99.97 E-value=3.8e-32 Score=292.60 Aligned_cols=207 Identities=15% Similarity=0.124 Sum_probs=160.7
Q ss_pred eeeehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCC----------------------CC
Q 004998 63 RKHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKR----------------------SV 118 (720)
Q Consensus 63 r~~~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~----------------------~l 118 (720)
+..+|..+|.++ +||||+++++ ++.... .+|+|||| .+++|.+++..... .+
T Consensus 94 ~~~~E~~~l~~l~~hp~iv~~~~-~~~~~~---~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 169 (344)
T 1rjb_A 94 ALMSELKMMTQLGSHENIVNLLG-ACTLSG---PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVL 169 (344)
T ss_dssp HHHHHHHHHHHHCCCTTBCCEEE-EECSSS---SCEEEEECCTTCBHHHHHHTTTTCC---------------------C
T ss_pred HHHHHHHHHHhhcCCCCeeeEEE-EEeeCC---ccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccC
Confidence 344788899999 9999999999 554443 57999999 89999999955432 37
Q ss_pred CHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhh
Q 004998 119 DVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDM 198 (720)
Q Consensus 119 ~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (720)
++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++........
T Consensus 170 ~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~---------------------- 227 (344)
T 1rjb_A 170 TFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSN---------------------- 227 (344)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTT----------------------
T ss_pred CHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEEcCCCcEEeCCCccCcccccCcc----------------------
Confidence 8999999999999999999999999999999999999999999999998843211100
Q ss_pred HhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCccc
Q 004998 199 LQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYA 278 (720)
Q Consensus 199 ~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~ 278 (720)
. .......||+.|+
T Consensus 228 -----------~-------------------------------------------------------~~~~~~~~t~~y~ 241 (344)
T 1rjb_A 228 -----------Y-------------------------------------------------------VVRGNARLPVKWM 241 (344)
T ss_dssp -----------S-------------------------------------------------------EEETTEEECGGGC
T ss_pred -----------c-------------------------------------------------------eeccCccCccCcc
Confidence 0 0001135788999
Q ss_pred CCccccCCCCCccccchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCC
Q 004998 279 SPEELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK 354 (720)
Q Consensus 279 APE~l~~~~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpt 354 (720)
|||++.+..++.++|||||||++|||++ ||............+.....++......+...+|+.+||+.||.+|||
T Consensus 242 aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps 321 (344)
T 1rjb_A 242 APESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPS 321 (344)
T ss_dssp CHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred CHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCcHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcC
Confidence 9999988889999999999999999997 666554443444444444333332233345569999999999999999
Q ss_pred hHHHHcC
Q 004998 355 MGELLQS 361 (720)
Q Consensus 355 a~eiL~h 361 (720)
+.+++++
T Consensus 322 ~~~l~~~ 328 (344)
T 1rjb_A 322 FPNLTSF 328 (344)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999873
No 175
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=99.97 E-value=8.8e-32 Score=283.21 Aligned_cols=209 Identities=14% Similarity=0.078 Sum_probs=160.4
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++.+++||||+++++ ++.+... ..+++||| .+++|.+++......+++.+++.++.||+.||.|||++|
T Consensus 68 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~~--~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ 144 (298)
T 3pls_A 68 AFLREGLLMRGLNHPNVLALIG-IMLPPEG--LPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQK 144 (298)
T ss_dssp HHHHHHHHHHTCCCTTBCCCCE-EECCSSS--CCEEEECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCeeeEEE-EEecCCC--CcEEEEecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3347888999999999999999 5544332 34899999 899999999776677999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||.+......... .
T Consensus 145 i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~-------------------------------~------------ 181 (298)
T 3pls_A 145 FVHRDLAARNCMLDESFTVKVADFGLARDILDREYY-------------------------------S------------ 181 (298)
T ss_dssp CCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGGG-------------------------------C------------
T ss_pred cccCCCCcceEEEcCCCcEEeCcCCCcccccCCccc-------------------------------c------------
Confidence 999999999999999999999999988543211000 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
........+|+.|+|||.+.+..++.++|||||||++
T Consensus 182 -------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 218 (298)
T 3pls_A 182 -------------------------------------------VQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLL 218 (298)
T ss_dssp -------------------------------------------SCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHH
T ss_pred -------------------------------------------cccCcCCCCCccccChhhhccCCCChhhchhhHHHHH
Confidence 0000113578999999999998899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|+|++ |+............+.....++......+...+|+.+||+.||.+|||+.++++
T Consensus 219 ~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~ 280 (298)
T 3pls_A 219 WELLTRGAPPYRHIDPFDLTHFLAQGRRLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVG 280 (298)
T ss_dssp HHHHHTSCCTTTTSCGGGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHhhCCCCCCccCCHHHHHHHhhcCCCCCCCccchHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 99998 333333332334444443333332223344569999999999999999999986
No 176
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=99.97 E-value=4.5e-32 Score=285.10 Aligned_cols=205 Identities=18% Similarity=0.266 Sum_probs=155.2
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++||||+++++ +.... .+++|||| .|++|.+++......+++.+++.++.||+.||.|||++|
T Consensus 66 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~ 140 (289)
T 3og7_A 66 AFKNEVGVLRKTRHVNILLFMG-YSTAP----QLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS 140 (289)
T ss_dssp HHHHHHHHHTTCCCTTBCCEEE-EECSS----SCEEEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCcEEEEEe-eccCC----ccEEEEEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3447888999999999999999 44332 46899999 889999999666667999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.++|+|||++.........
T Consensus 141 i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-------------------------------------------- 176 (289)
T 3og7_A 141 IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGS-------------------------------------------- 176 (289)
T ss_dssp CCCSCCCGGGEEEETTTEEEECCCC-------------------------------------------------------
T ss_pred cccccCccceEEECCCCCEEEccceecccccccccc--------------------------------------------
Confidence 999999999999999999999999987432111000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCcccc---CCCCCccccchhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA---GAPVSCASDIYRLG 298 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~---~~~~s~~sDIwSLG 298 (720)
.......||+.|+|||++. +..++.++||||||
T Consensus 177 --------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG 212 (289)
T 3og7_A 177 --------------------------------------------HQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFG 212 (289)
T ss_dssp ---------------------------------------------------CCCTTCCHHHHC----CCSCHHHHHHHHH
T ss_pred --------------------------------------------ccccccCCCccccCchhhcccCCCCCCcccchHHHH
Confidence 0001146899999999996 55689999999999
Q ss_pred hhhhhccc---cCCCCchHHHHHHHhhcCCCCccc---cccCch-HHHHHHHcCCCCCCCCCChHHHHc
Q 004998 299 VLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQL---LLKFPK-EASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~---~~~~p~-~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|++|||++ ||............+.....++.+ ...+|. ..+|+.+||+.||.+|||+.++++
T Consensus 213 ~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~ 281 (289)
T 3og7_A 213 IVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILA 281 (289)
T ss_dssp HHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCCCCTTSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHCCCCccccchHHHHHHHhcccccCcchhhccccCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 99999999 777665555555555555444332 233444 459999999999999999999986
No 177
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=99.97 E-value=7.4e-32 Score=287.75 Aligned_cols=215 Identities=12% Similarity=0.059 Sum_probs=153.8
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCC---CcEEEEEec-CCCCHHHHHhC-----CCCCCCHHHHHHHHHHHHHH
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAI---DPFVHAIEW-GDVSLRQWLDK-----PKRSVDVYECLHIFRQIVEI 133 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~---~~~~lv~E~-~ggsL~~~L~~-----~~~~l~~~~~~~i~~QIl~a 133 (720)
+..+|..++.+++||||+++++ ++...... ...+++||| .+++|.+++.. ....+++.+++.++.||+.|
T Consensus 71 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~a 149 (323)
T 3qup_A 71 EFLREAACMKEFDHPHVAKLVG-VSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACG 149 (323)
T ss_dssp HHHHHHHHHTTCCCTTBCCCCE-EEECC-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCceehhhc-eeeccccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHH
Confidence 3447888999999999999999 44333221 235899999 89999999932 12258999999999999999
Q ss_pred HHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccc
Q 004998 134 VYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLV 213 (720)
Q Consensus 134 L~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla 213 (720)
|.|||++||+||||||+|||++.++.+||+|||++.........
T Consensus 150 l~~LH~~~ivH~Dikp~NIli~~~~~~kl~Dfg~a~~~~~~~~~------------------------------------ 193 (323)
T 3qup_A 150 MEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYY------------------------------------ 193 (323)
T ss_dssp HHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC----------------------------------------------
T ss_pred HHHHHcCCcccCCCCcceEEEcCCCCEEEeeccccccccccccc------------------------------------
Confidence 99999999999999999999999999999999988433111000
Q ss_pred cCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCcccc
Q 004998 214 TAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASD 293 (720)
Q Consensus 214 ~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sD 293 (720)
.......+|+.|+|||++.+..++.++|
T Consensus 194 ----------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~D 221 (323)
T 3qup_A 194 ----------------------------------------------------RQGCASKLPVKWLALESLADNLYTVHSD 221 (323)
T ss_dssp -----------------------------------------------------------CCGGGCCHHHHHHCCCCHHHH
T ss_pred ----------------------------------------------------cccccccCcccccCchhhcCCCCCCccc
Confidence 0000134688999999999988999999
Q ss_pred chhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCC-------hHHHHcCc
Q 004998 294 IYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK-------MGELLQSE 362 (720)
Q Consensus 294 IwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpt-------a~eiL~hp 362 (720)
||||||++|||++ ||...... .....+.....++......+...+|+.+||+.||.+||| ++++++||
T Consensus 222 i~slG~il~ell~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~ 300 (323)
T 3qup_A 222 VWAFGVTMWEIMTRGQTPYAGIENA-EIYNYLIGGNRLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHL 300 (323)
T ss_dssp HHHHHHHHHHHHTTSCCTTTTCCGG-GHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred hhhHHHHHHHHHhCCCCCccccChH-HHHHHHhcCCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 9999999999998 55554433 333334333333333333345569999999999999999 77778899
Q ss_pred ccCCC
Q 004998 363 FLNEP 367 (720)
Q Consensus 363 ~~~~~ 367 (720)
|+...
T Consensus 301 ~~~~~ 305 (323)
T 3qup_A 301 SVLST 305 (323)
T ss_dssp -----
T ss_pred hhcCC
Confidence 98875
No 178
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=99.97 E-value=1.7e-32 Score=300.20 Aligned_cols=204 Identities=16% Similarity=0.179 Sum_probs=158.6
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++|||||++++ ++.... .+|+|||| .+++|.+++...+..+++..++.++.||+.||.|||++|
T Consensus 158 ~~~~E~~~l~~l~hpniv~~~~-~~~~~~---~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ 233 (377)
T 3cbl_A 158 KFLQEARILKQYSHPNIVRLIG-VCTQKQ---PIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC 233 (377)
T ss_dssp TTTHHHHHHTTCCCTTBCCEEE-EECSSS---SCEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCEEEEEE-EEecCC---CcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3447888999999999999999 554443 57999999 899999999665556999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||+++........
T Consensus 234 ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~-------------------------------------------- 269 (377)
T 3cbl_A 234 CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYA-------------------------------------------- 269 (377)
T ss_dssp EECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEE--------------------------------------------
T ss_pred cCCcccCHHHEEEcCCCcEEECcCCCceecCCCcee--------------------------------------------
Confidence 999999999999999999999998887432110000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
. ......+++.|+|||++.+..++.++|||||||++
T Consensus 270 ---------------------------~-----------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il 305 (377)
T 3cbl_A 270 ---------------------------A-----------------SGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILL 305 (377)
T ss_dssp ---------------------------C-----------------CSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHH
T ss_pred ---------------------------e-----------------cCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHH
Confidence 0 00002357789999999988899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||...... .....+..+..++. +..+| ...+||.+||+.||.+|||+.++++
T Consensus 306 ~el~t~g~~p~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~ 367 (377)
T 3cbl_A 306 WETFSLGASPYPNLSNQ-QTREFVEKGGRLPC-PELCPDAVFRLMEQCWAYEPGQRPSFSTIYQ 367 (377)
T ss_dssp HHHHTTSCCSSTTSCHH-HHHHHHHTTCCCCC-CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHhCCCCCCCCCCHH-HHHHHHHcCCCCCC-CCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 99997 66655443 33333443333222 23344 4459999999999999999999985
No 179
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=99.97 E-value=6.8e-32 Score=284.52 Aligned_cols=207 Identities=16% Similarity=0.136 Sum_probs=158.2
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++.+++||||+++++.++..+. ..|++||| .+++|.+++......+++.+++.++.||+.||.|||++|
T Consensus 72 ~~~~E~~~l~~l~h~~iv~~~~~~~~~~~---~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~~ 148 (298)
T 3f66_A 72 QFLTEGIIMKDFSHPNVLSLLGICLRSEG---SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 148 (298)
T ss_dssp HHHHHHHHHHTCCCTTBCCCCEEECCSSS---CCEEEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCEeeeeeEEEcCCC---ceEEEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 34478889999999999999994344332 46899999 888999999776667999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++.+||+|||.+......... .
T Consensus 149 i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~-------------------------------~------------ 185 (298)
T 3f66_A 149 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYY-------------------------------S------------ 185 (298)
T ss_dssp CCCSCCSGGGEEECTTCCEEECSCGGGCCCSCGGGC-------------------------------B------------
T ss_pred ccCCCCchheEEECCCCCEEECcccccccccccchh-------------------------------c------------
Confidence 999999999999999999999999988543211000 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
........||+.|+|||.+.+..++.++|||||||++
T Consensus 186 -------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 222 (298)
T 3f66_A 186 -------------------------------------------VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLL 222 (298)
T ss_dssp -------------------------------------------C-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred -------------------------------------------cccccCCCCCccccChHHhcCCCCChHHHHHHHHHHH
Confidence 0000113578999999999988899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|+|++ ||...... .....+.....+.. +..+| ...+|+.+||++||.+|||+.|+++
T Consensus 223 ~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~l~~li~~~l~~~p~~Rps~~ell~ 284 (298)
T 3f66_A 223 WELMTRGAPPYPDVNTF-DITVYLLQGRRLLQ-PEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 284 (298)
T ss_dssp HHHHTTSCCSSTTSCTT-THHHHHHTTCCCCC-CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHhCCCCCCccCCHH-HHHHHHhcCCCCCC-CccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 99998 44443332 22222322222222 22334 4559999999999999999999986
No 180
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=99.97 E-value=1.7e-32 Score=298.27 Aligned_cols=209 Identities=20% Similarity=0.261 Sum_probs=154.2
Q ss_pred ehhhhcccCC-----------CCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHH
Q 004998 66 SDGVELTHGD-----------HLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK-PKRSVDVYECLHIFRQIVEI 133 (720)
Q Consensus 66 ~e~~~Ls~l~-----------HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~a 133 (720)
+|..++.++. ||||+++++.+.........++++|||.+++|.+++.. ....+++..++.++.||+.|
T Consensus 64 ~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~a 143 (373)
T 1q8y_A 64 DEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLG 143 (373)
T ss_dssp HHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhcccccchhccccchHHHHHHHhhccCCCCceEEEEEecCCCCHHHHHHHhhccCCcHHHHHHHHHHHHHH
Confidence 5666666665 89999999955544444457899999999999999954 34459999999999999999
Q ss_pred HHHHHHc-CceeccCCCCcEEEcc------CCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccc
Q 004998 134 VYAAHSQ-GIVVHNVRPSCFVMSS------FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLR 206 (720)
Q Consensus 134 L~yLHs~-gIvHrDLKP~NILl~~------~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 206 (720)
|.|||++ ||+||||||+|||++. .+.+||+|||++...+..
T Consensus 144 L~~lH~~~~ivH~Dikp~NIll~~~~~~~~~~~~kl~Dfg~a~~~~~~-------------------------------- 191 (373)
T 1q8y_A 144 LDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEH-------------------------------- 191 (373)
T ss_dssp HHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTBC--------------------------------
T ss_pred HHHHHhcCCEEecCCChHHeEEeccCCCcCcceEEEcccccccccCCC--------------------------------
Confidence 9999998 9999999999999953 347899888876322100
Q ss_pred ccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC
Q 004998 207 REDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA 286 (720)
Q Consensus 207 l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 286 (720)
.....||+.|+|||++.+.
T Consensus 192 -------------------------------------------------------------~~~~~~t~~y~aPE~~~~~ 210 (373)
T 1q8y_A 192 -------------------------------------------------------------YTNSIQTREYRSPEVLLGA 210 (373)
T ss_dssp -------------------------------------------------------------CCSCCSCGGGCCHHHHHTC
T ss_pred -------------------------------------------------------------CCCCCCCccccCcHHHhCC
Confidence 0113679999999999999
Q ss_pred CCCccccchhhhhhhhhccc---cCCCCchH-----HHHHHHhhc--CCCCccc--------------------------
Q 004998 287 PVSCASDIYRLGVLLFELFC---PFSTGEEK-----TRTMSSLRH--RVLPPQL-------------------------- 330 (720)
Q Consensus 287 ~~s~~sDIwSLGvll~eLlt---pf~~~~~~-----~~~~~~l~~--~~~p~~~-------------------------- 330 (720)
.++.++|||||||++|||++ ||...... ......+.. +.+|+.+
T Consensus 211 ~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (373)
T 1q8y_A 211 PWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFW 290 (373)
T ss_dssp CCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBC
T ss_pred CCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhccccccccc
Confidence 99999999999999999999 66543210 011111110 1111110
Q ss_pred ------------ccc-CchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 331 ------------LLK-FPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 331 ------------~~~-~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
... .+...+||.+||++||.+|||+.|+|+||||+..
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~ 340 (373)
T 1q8y_A 291 PLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDT 340 (373)
T ss_dssp CHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTC
T ss_pred chhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhhChhhhcc
Confidence 011 1233499999999999999999999999999986
No 181
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=99.97 E-value=1.6e-32 Score=299.39 Aligned_cols=209 Identities=13% Similarity=0.143 Sum_probs=159.6
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC------CCCCHHHHHHHHHHHHHHHH
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK------RSVDVYECLHIFRQIVEIVY 135 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~------~~l~~~~~~~i~~QIl~aL~ 135 (720)
+..+|..++++++|||||++++ ++.... ..|+|||| .|++|.+++.... ..+++.+++.++.||+.||.
T Consensus 120 ~~~~E~~~l~~l~hpnIv~~~~-~~~~~~---~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~ 195 (367)
T 3l9p_A 120 DFLMEALIISKFNHQNIVRCIG-VSLQSL---PRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 195 (367)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EECSSS---SCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCCeEEE-EEecCC---CCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHH
Confidence 4457888999999999999999 554443 45999999 7999999994322 35899999999999999999
Q ss_pred HHHHcCceeccCCCCcEEEccCC---ceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccccccccc
Q 004998 136 AAHSQGIVVHNVRPSCFVMSSFN---HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQL 212 (720)
Q Consensus 136 yLHs~gIvHrDLKP~NILl~~~~---~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgl 212 (720)
|||++||+||||||+|||++.++ .+||+|||+++..... ..
T Consensus 196 ~LH~~~ivHrDlkp~NIll~~~~~~~~~kL~DFG~a~~~~~~----------------------------------~~-- 239 (367)
T 3l9p_A 196 YLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA----------------------------------GY-- 239 (367)
T ss_dssp HHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHHH----------------------------------SS--
T ss_pred HHHhCCeeCCCCChhhEEEecCCCCceEEECCCccccccccc----------------------------------cc--
Confidence 99999999999999999999555 4999988887321000 00
Q ss_pred ccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccc
Q 004998 213 VTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCAS 292 (720)
Q Consensus 213 a~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~s 292 (720)
........||+.|+|||++.+..++.++
T Consensus 240 ----------------------------------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~ 267 (367)
T 3l9p_A 240 ----------------------------------------------------YRKGGCAMLPVKWMPPEAFMEGIFTSKT 267 (367)
T ss_dssp ----------------------------------------------------CTTCCGGGSCGGGCCHHHHHHCCCCHHH
T ss_pred ----------------------------------------------------cccCCCcCCcccEECHHHhcCCCCCcHH
Confidence 0000114679999999999888899999
Q ss_pred cchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004998 293 DIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 293 DIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
|||||||++|||++ ||...... .....+.....++......+...+|+.+||+.||.+|||+.+|+++.++
T Consensus 268 DvwslG~il~ellt~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~ 342 (367)
T 3l9p_A 268 DTWSFGVLLWEIFSLGYMPYPSKSNQ-EVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEY 342 (367)
T ss_dssp HHHHHHHHHHHHHTTSCCSSTTCCHH-HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCCCCCCHH-HHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence 99999999999997 56554443 3444444433333222233445699999999999999999999987654
No 182
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=99.97 E-value=5.7e-32 Score=285.45 Aligned_cols=209 Identities=17% Similarity=0.129 Sum_probs=158.3
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++||||+++++ ++.... ...+++|||| .+++|.+++......+++..++.++.||+.||.|||++|
T Consensus 69 ~~~~E~~~l~~l~h~~i~~~~~-~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ 146 (302)
T 4e5w_A 69 DLKKEIEILRNLYHENIVKYKG-ICTEDG-GNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQ 146 (302)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEE-EEEC----CCEEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCeeeeee-EEecCC-CceEEEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcCC
Confidence 3447888999999999999999 444332 2358999999 789999999555556999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.++|+|||.+......... +
T Consensus 147 i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~--------------------------------~----------- 183 (302)
T 4e5w_A 147 YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEY--------------------------------Y----------- 183 (302)
T ss_dssp EECSCCSGGGEEEEETTEEEECCCTTCEECCTTCCE--------------------------------E-----------
T ss_pred cccCCCchheEEEcCCCCEEECcccccccccCCCcc--------------------------------e-----------
Confidence 999999999999999999999999987443221000 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
.......||+.|+|||++.+..++.++|||||||++
T Consensus 184 --------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 219 (302)
T 4e5w_A 184 --------------------------------------------TVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTL 219 (302)
T ss_dssp --------------------------------------------ECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHH
T ss_pred --------------------------------------------eccCCCCCCccccCCeeecCCCCCcchhHHHHHHHH
Confidence 000113578899999999988899999999999999
Q ss_pred hhccccCCC-----------------CchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 302 FELFCPFST-----------------GEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLltpf~~-----------------~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|+|+++..+ ..........+......+......+...+|+.+||+.||.+|||+.++++
T Consensus 220 ~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 295 (302)
T 4e5w_A 220 HELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIE 295 (302)
T ss_dssp HHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHH
T ss_pred HHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHhccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHH
Confidence 999993221 12222333333333333322233345569999999999999999999986
No 183
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=99.97 E-value=6.2e-32 Score=289.76 Aligned_cols=210 Identities=15% Similarity=0.130 Sum_probs=161.6
Q ss_pred eeehhhhcccC-CCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..++.++ +||||+++++ ++..+. ..|+||||.|++|.+++......+++..++.|+.||+.||.|||++||
T Consensus 51 ~~~E~~~l~~l~~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i 126 (330)
T 2izr_A 51 LHLEYRFYKQLGSGDGIPQVYY-FGPCGK---YNAMVLELLGPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNL 126 (330)
T ss_dssp HHHHHHHHHHHCSCTTSCCEEE-EEEETT---EEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHHhhCCCCCCEEEE-EEecCC---ccEEEEEeCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 34677788998 9999999999 555443 679999999999999996655669999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCc-----eEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCC
Q 004998 143 VVHNVRPSCFVMSSFNH-----VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~-----vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~ 217 (720)
+||||||+|||++.++. +||+|||++........... .
T Consensus 127 iHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~~~~~------------------------------~------- 169 (330)
T 2izr_A 127 IYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKH------------------------------I------- 169 (330)
T ss_dssp ECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTTTCCB------------------------------C-------
T ss_pred eccCCCHHHeeeccCCCCCCceEEEEEcccceeeecCCCCcc------------------------------c-------
Confidence 99999999999998887 99999998854322110000 0
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhh
Q 004998 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRL 297 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSL 297 (720)
.........||+.|+|||++.+..++.++|||||
T Consensus 170 ----------------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~sl 203 (330)
T 2izr_A 170 ----------------------------------------------PYREHKSLTGTARYMSINTHLGKEQSRRDDLEAL 203 (330)
T ss_dssp ----------------------------------------------CCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHH
T ss_pred ----------------------------------------------cccccCCcCCCccccChHHHcCCCCCchhHHHHH
Confidence 0000112578999999999999999999999999
Q ss_pred hhhhhhccc---cCCCC--chHHHHHHHhhc---CCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 298 GVLLFELFC---PFSTG--EEKTRTMSSLRH---RVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 298 Gvll~eLlt---pf~~~--~~~~~~~~~l~~---~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
||++|||++ ||... ......+..+.. ...+..+...+|...+|+..||..||.+||++.+|++
T Consensus 204 G~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~~~li~~~l~~~p~~RP~~~~l~~ 274 (330)
T 2izr_A 204 GHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLCENFPEMATYLRYVRRLDFFEKPDYDYLRK 274 (330)
T ss_dssp HHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHSCHHHHTTTCHHHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred HHHHHHHhcCCCCccccccccHHHHHHHHHhhhccCCHHHHhccChHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence 999999999 77653 222233333322 1222233445677779999999999999999999875
No 184
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=99.97 E-value=5.7e-32 Score=290.14 Aligned_cols=204 Identities=15% Similarity=0.111 Sum_probs=157.3
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++.+++||||+++++ ++... ..++++|| .+++|.+++......+++..++.|+.||+.||.|||++|
T Consensus 63 ~~~~E~~~l~~l~hp~iv~~~~-~~~~~----~~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ 137 (327)
T 3lzb_A 63 EILDEAYVMASVDNPHVCRLLG-ICLTS----TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 137 (327)
T ss_dssp HHHHHHHHHTTCCBTTBCCCCE-EEESS----SEEEEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCeeEEEE-EEecC----CceEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence 3447888999999999999999 55544 26788888 999999999766666999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||++...+..... .
T Consensus 138 ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~~~--------------------------------~----------- 174 (327)
T 3lzb_A 138 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE--------------------------------Y----------- 174 (327)
T ss_dssp CCCSCCCGGGEEEEETTEEEECCTTC------------------------------------------------------
T ss_pred CcCCCCCHHHEEEcCCCCEEEccCcceeEccCcccc--------------------------------c-----------
Confidence 999999999999999999999999988543221000 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......||+.|+|||++.+..++.++|||||||++
T Consensus 175 ---------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il 209 (327)
T 3lzb_A 175 ---------------------------------------------HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTV 209 (327)
T ss_dssp --------------------------------------------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred ---------------------------------------------cccCCCccccccCHHHHcCCCCChHHHHHHHHHHH
Confidence 00013568899999999998899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||...... .....+.....++......+...+|+.+||+.||.+||++.|+++
T Consensus 210 ~ell~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 271 (327)
T 3lzb_A 210 WELMTFGSKPYDGIPAS-EISSILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELII 271 (327)
T ss_dssp HHHHTTSCCTTTTCCGG-GHHHHHHTTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHCCCCCCCCCCHH-HHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 99998 56554333 233344444333333334455669999999999999999999986
No 185
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=99.97 E-value=3.5e-32 Score=285.24 Aligned_cols=195 Identities=17% Similarity=0.227 Sum_probs=152.6
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..++.+++||||+++++ ++.++. ..++|||| .|++|.+++......+++..++.++.||+.||.|||++||
T Consensus 59 ~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~i 134 (289)
T 4fvq_A 59 FFEAASMMSKLSHKHLVLNYG-VCVCGD---ENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENTL 134 (289)
T ss_dssp HHHHHHHHHTSCCTTBCCEEE-EECCTT---CCEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhCCCCCEeEEEE-EEEeCC---CCEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhCCe
Confidence 347788999999999999999 555443 46899999 7899999997665569999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCc--------eEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccccccccccc
Q 004998 143 VVHNVRPSCFVMSSFNH--------VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVT 214 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~--------vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~ 214 (720)
+||||||+|||++.++. +||+|||.+......
T Consensus 135 vH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg~~~~~~~~---------------------------------------- 174 (289)
T 4fvq_A 135 IHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPK---------------------------------------- 174 (289)
T ss_dssp CCCCCCGGGEEEEECCBGGGTBCCEEEECCCCSCTTTSCH----------------------------------------
T ss_pred ECCCcCcceEEEecCCcccccccceeeeccCcccccccCc----------------------------------------
Confidence 99999999999998887 888777766221000
Q ss_pred CCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-CCCCcccc
Q 004998 215 APTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASD 293 (720)
Q Consensus 215 ~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sD 293 (720)
....||+.|+|||++.+ ..++.++|
T Consensus 175 ------------------------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~~D 200 (289)
T 4fvq_A 175 ------------------------------------------------------DILQERIPWVPPECIENPKNLNLATD 200 (289)
T ss_dssp ------------------------------------------------------HHHHHTTTTSCHHHHHCGGGCCHHHH
T ss_pred ------------------------------------------------------cccCCcCcccCHHHhCCCCCCCchhH
Confidence 01356889999999988 56899999
Q ss_pred chhhhhhhhhccc----cCCCCchHHHHHHHhhc-CCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 294 IYRLGVLLFELFC----PFSTGEEKTRTMSSLRH-RVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 294 IwSLGvll~eLlt----pf~~~~~~~~~~~~l~~-~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
||||||++|||++ ||...... ........ ..+++. ..+...+|+.+||++||.+|||+.++++
T Consensus 201 iwslG~il~el~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~---~~~~l~~li~~~l~~dp~~Rps~~~ll~ 268 (289)
T 4fvq_A 201 KWSFGTTLWEICSGGDKPLSALDSQ-RKLQFYEDRHQLPAP---KAAELANLINNCMDYEPDHRPSFRAIIR 268 (289)
T ss_dssp HHHHHHHHHHHHTTTCCTTTTSCHH-HHHHHHHTTCCCCCC---SSCTTHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCCccccchH-HHHHHhhccCCCCCC---CCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 9999999999999 33333322 22222222 222222 2345579999999999999999999997
No 186
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=99.97 E-value=3.9e-32 Score=283.68 Aligned_cols=208 Identities=22% Similarity=0.312 Sum_probs=163.2
Q ss_pred eeehhhhcccCCCCCceecccceeecC-------------CCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHH
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENE-------------AAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFR 128 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~-------------~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~ 128 (720)
..+|..++.+++||||+++++ ++... .....+|++||| .+++|.+++.. ....+++..++.++.
T Consensus 51 ~~~e~~~l~~l~h~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ 129 (284)
T 2a19_B 51 AEREVKALAKLDHVNIVHYNG-CWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFE 129 (284)
T ss_dssp GHHHHHHHHHCCCTTBCCEEE-EEEEEEEC---------CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCEEEEee-eEeccccCcccccccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHH
Confidence 346788999999999999999 44321 112347999999 88899999943 334699999999999
Q ss_pred HHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccccc
Q 004998 129 QIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRRE 208 (720)
Q Consensus 129 QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~ 208 (720)
||+.||.|||++||+||||||+||+++.++.++|+|||.+.......
T Consensus 130 qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--------------------------------- 176 (284)
T 2a19_B 130 QITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDG--------------------------------- 176 (284)
T ss_dssp HHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEESSCCS---------------------------------
T ss_pred HHHHHHHHHHhCCeeeccCCHHHEEEcCCCCEEECcchhheeccccc---------------------------------
Confidence 99999999999999999999999999999999999998874321110
Q ss_pred ccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCC
Q 004998 209 DLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV 288 (720)
Q Consensus 209 Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 288 (720)
......||+.|+|||++.+..+
T Consensus 177 ----------------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~ 198 (284)
T 2a19_B 177 ----------------------------------------------------------KRTRSKGTLRYMSPEQISSQDY 198 (284)
T ss_dssp ----------------------------------------------------------CCCCCCSCCTTSCHHHHHCSCC
T ss_pred ----------------------------------------------------------cccccCCcccccChhhhccCCC
Confidence 0011357999999999999889
Q ss_pred CccccchhhhhhhhhccccCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCC
Q 004998 289 SCASDIYRLGVLLFELFCPFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 366 (720)
Q Consensus 289 s~~sDIwSLGvll~eLltpf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~ 366 (720)
+.++|||||||++|||+++..+..........+....+++.+ .+...+|+.+||+.||.+|||+.|++++.+.-.
T Consensus 199 ~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~ 273 (284)
T 2a19_B 199 GKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDGIISDIF---DKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWK 273 (284)
T ss_dssp CTHHHHHHHHHHHHHHHSCCSSHHHHHHHHHHHHTTCCCTTS---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHT
T ss_pred cchhhhHHHHHHHHHHHhcCCcchhHHHHHHHhhcccccccC---CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHh
Confidence 999999999999999999655544444445555555444332 234459999999999999999999999876443
No 187
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=99.97 E-value=4e-32 Score=296.89 Aligned_cols=208 Identities=15% Similarity=0.124 Sum_probs=152.8
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++.+++||||+++++.++..+. ..|+|||| .+++|.+++......+++.+++.++.||+.||.|||++|
T Consensus 136 ~~~~E~~il~~l~hpnIv~~~~~~~~~~~---~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ 212 (373)
T 3c1x_A 136 QFLTEGIIMKDFSHPNVLSLLGICLRSEG---SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK 212 (373)
T ss_dssp HHHHHHTTSTTCCCTTBCCCCEEECCCSS---CCEEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCcceEEEEEEcCCC---CeEEEEECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 34478889999999999999994343332 46899999 889999999777667999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||+++........ .
T Consensus 213 ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~--------------------------------~----------- 249 (373)
T 3c1x_A 213 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFD--------------------------------S----------- 249 (373)
T ss_dssp CCCSCCCGGGEEECTTCCEEECCC--------------------------------------------------------
T ss_pred EecCccchheEEECCCCCEEEeeccccccccccccc--------------------------------c-----------
Confidence 999999999999999999999999988543111000 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
........+|+.|+|||++.+..++.++|||||||++
T Consensus 250 -------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il 286 (373)
T 3c1x_A 250 -------------------------------------------VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLL 286 (373)
T ss_dssp ---------------------------------------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred -------------------------------------------ccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHH
Confidence 0000113568899999999988899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||...... .....+..+..+.......+...+|+.+||+.||.+|||+.|+++
T Consensus 287 ~ellt~~~~p~~~~~~~-~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~ 348 (373)
T 3c1x_A 287 WELMTRGAPPYPDVNTF-DITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 348 (373)
T ss_dssp HHHHTTSCCSCTTSCSS-CHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHhCcCCCCCCCCHH-HHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 99998 55443332 222233333222222222234459999999999999999999986
No 188
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=99.97 E-value=3e-32 Score=303.88 Aligned_cols=211 Identities=16% Similarity=0.228 Sum_probs=146.6
Q ss_pred eehhhhcccC-CCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCC------CCHHHHHHHHHHHHHHHHHH
Q 004998 65 HSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRS------VDVYECLHIFRQIVEIVYAA 137 (720)
Q Consensus 65 ~~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~------l~~~~~~~i~~QIl~aL~yL 137 (720)
.+|..+|.++ +|||||++++ ++.+.. .+|+||||.+++|.+++...... .++..++.++.||+.||.||
T Consensus 56 ~~E~~~l~~l~~HpnIv~~~~-~~~~~~---~~~lv~E~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~L 131 (434)
T 2rio_A 56 LMEIKLLTESDDHPNVIRYYC-SETTDR---FLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHL 131 (434)
T ss_dssp HHHHHHHHHHTTSTTBCCEEE-EEECSS---EEEEEECCCSEEHHHHHHTC------------CCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccCCCCcCeEEE-EEecCC---eEEEEEecCCCCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHH
Confidence 3677788765 8999999999 554443 68999999778999999654321 13335678999999999999
Q ss_pred HHcCceeccCCCCcEEEccC-------------CceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhc
Q 004998 138 HSQGIVVHNVRPSCFVMSSF-------------NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTR 204 (720)
Q Consensus 138 Hs~gIvHrDLKP~NILl~~~-------------~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 204 (720)
|++||+||||||+|||++.+ +.+||+|||++........
T Consensus 132 H~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG~a~~~~~~~~---------------------------- 183 (434)
T 2rio_A 132 HSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQS---------------------------- 183 (434)
T ss_dssp HHTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCTTCEECCC-------------------------------
T ss_pred HHCCccccCCChHhEEEecCcccccccccCCCceEEEEcccccceecCCCCc----------------------------
Confidence 99999999999999999754 3788888887743221100
Q ss_pred ccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCcccc
Q 004998 205 LRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA 284 (720)
Q Consensus 205 ~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 284 (720)
.+ ........||+.|+|||++.
T Consensus 184 ----~~------------------------------------------------------~~~~~~~~gt~~y~aPE~~~ 205 (434)
T 2rio_A 184 ----SF------------------------------------------------------RTNLNNPSGTSGWRAPELLE 205 (434)
T ss_dssp ---------------------------------------------------------------------CCTTSCHHHHS
T ss_pred ----cc------------------------------------------------------eeeecCCCCCCCccCHHHhc
Confidence 00 00001147899999999997
Q ss_pred C-------CCCCccccchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCcccc----cc-CchHHHHHHHcCCCC
Q 004998 285 G-------APVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLL----LK-FPKEASFCLWLLHPE 348 (720)
Q Consensus 285 ~-------~~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~----~~-~p~~~~li~~~L~~d 348 (720)
+ ..++.++|||||||++|||++ ||....... ...+......+... .. .+...+||.+||+.|
T Consensus 206 ~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~--~~i~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d 283 (434)
T 2rio_A 206 ESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE--SNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHD 283 (434)
T ss_dssp CCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH--HHHHHTCCCCCCCTTCCCHHHHHHHHHHHHHHTCSS
T ss_pred cccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhH--HHHhcCCCCcccccccccccchHHHHHHHHHHhhCC
Confidence 6 558999999999999999998 565433222 11122111111111 11 134459999999999
Q ss_pred CCCCCChHHHHcCcccCCC
Q 004998 349 PSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 349 P~~Rpta~eiL~hp~~~~~ 367 (720)
|.+|||+.++++||||...
T Consensus 284 P~~Rps~~eil~hp~f~~~ 302 (434)
T 2rio_A 284 PLKRPTAMKVLRHPLFWPK 302 (434)
T ss_dssp GGGSCCHHHHHTSGGGSCH
T ss_pred hhhCCCHHHHHhCCccCCc
Confidence 9999999999999999764
No 189
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=99.97 E-value=1.1e-31 Score=294.01 Aligned_cols=205 Identities=16% Similarity=0.160 Sum_probs=161.0
Q ss_pred eeeehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC---------------CCCCHHHHHH
Q 004998 63 RKHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---------------RSVDVYECLH 125 (720)
Q Consensus 63 r~~~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~---------------~~l~~~~~~~ 125 (720)
+..+|..++.++ +|||||++++ ++.... .+|+|||| .+++|.+++.... ..+++.+++.
T Consensus 120 ~~~~E~~~l~~l~~hpnIv~~~~-~~~~~~---~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 195 (382)
T 3tt0_A 120 DLISEMEMMKMIGKHKNIINLLG-ACTQDG---PLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVS 195 (382)
T ss_dssp HHHHHHHHHHHHCCCTTBCCEEE-EECSSS---SCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHH
T ss_pred HHHHHHHHHHHhcCCchhhhhee-eeccCC---ceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHH
Confidence 344788889988 9999999999 555443 46999999 7899999995432 3599999999
Q ss_pred HHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcc
Q 004998 126 IFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRL 205 (720)
Q Consensus 126 i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 205 (720)
|+.||+.||.|||++||+||||||+|||++.++.+||+|||++...+.....
T Consensus 196 i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~---------------------------- 247 (382)
T 3tt0_A 196 CAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY---------------------------- 247 (382)
T ss_dssp HHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECSCSCCCCSSCCCTT----------------------------
T ss_pred HHHHHHHHHHHHHhCCEecCCCCcceEEEcCCCcEEEcccCccccccccccc----------------------------
Confidence 9999999999999999999999999999999999999999988543221000
Q ss_pred cccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC
Q 004998 206 RREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG 285 (720)
Q Consensus 206 ~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 285 (720)
.......||+.|+|||++.+
T Consensus 248 ------------------------------------------------------------~~~~~~~~t~~y~aPE~~~~ 267 (382)
T 3tt0_A 248 ------------------------------------------------------------KKTTNGRLPVKWMAPEALFD 267 (382)
T ss_dssp ------------------------------------------------------------CCCTTCCCGGGGSCHHHHHS
T ss_pred ------------------------------------------------------------ccccCCCCCcceeCHHHhcC
Confidence 00011356889999999999
Q ss_pred CCCCccccchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 286 APVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 286 ~~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
..++.++|||||||++|||++ ||..... ......+.....++......+...+|+.+||+.||.+|||+.|+++
T Consensus 268 ~~~~~~~DiwslG~il~ellt~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~ 345 (382)
T 3tt0_A 268 RIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV-EELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 345 (382)
T ss_dssp CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH-HHHHHHHHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH-HHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 989999999999999999998 5655433 3444455544433333333445569999999999999999999987
No 190
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=99.97 E-value=5.6e-32 Score=287.32 Aligned_cols=198 Identities=18% Similarity=0.244 Sum_probs=152.0
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCC--CCCHHHHHHHHHHHHHHHHHHHH-
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKR--SVDVYECLHIFRQIVEIVYAAHS- 139 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~--~l~~~~~~~i~~QIl~aL~yLHs- 139 (720)
..+|..+|.+++||||+++++ ++.+ ..|+|||| .|++|.+++..... .+++..++.++.||+.||.|||+
T Consensus 48 ~~~E~~~l~~l~hp~iv~~~~-~~~~-----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~ 121 (307)
T 2eva_A 48 FIVELRQLSRVNHPNIVKLYG-ACLN-----PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSM 121 (307)
T ss_dssp HHHHHHHHHHCCCTTBCCEEE-BCTT-----TTEEEEECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHhcCCCCCcCeEEE-EEcC-----CcEEEEEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhC
Confidence 347788999999999999999 4432 35899999 89999999965432 47899999999999999999999
Q ss_pred --cCceeccCCCCcEEEccCCc-eEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCC
Q 004998 140 --QGIVVHNVRPSCFVMSSFNH-VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 216 (720)
Q Consensus 140 --~gIvHrDLKP~NILl~~~~~-vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~ 216 (720)
+||+||||||+|||++.++. +||+|||.+......
T Consensus 122 ~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~------------------------------------------ 159 (307)
T 2eva_A 122 QPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH------------------------------------------ 159 (307)
T ss_dssp SSSCCCCCCCSGGGEEEETTTTEEEECCCCC-------------------------------------------------
T ss_pred CCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc------------------------------------------
Confidence 89999999999999998886 799988877322100
Q ss_pred CCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchh
Q 004998 217 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYR 296 (720)
Q Consensus 217 ~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwS 296 (720)
.....||+.|+|||++.+..++.++||||
T Consensus 160 ---------------------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~Di~s 188 (307)
T 2eva_A 160 ---------------------------------------------------MTNNKGSAAWMAPEVFEGSNYSEKCDVFS 188 (307)
T ss_dssp --------------------------------------------------------CCTTSSCHHHHTCCCCCTHHHHHH
T ss_pred ---------------------------------------------------cccCCCCCceEChhhhCCCCCCcHHHHHH
Confidence 00135799999999999988999999999
Q ss_pred hhhhhhhccc---cCCCCc-hHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 297 LGVLLFELFC---PFSTGE-EKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 297 LGvll~eLlt---pf~~~~-~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++|||++ ||.... .....+..+.....++......+...+|+.+||+.||.+|||+.++++
T Consensus 189 lG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 256 (307)
T 2eva_A 189 WGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVK 256 (307)
T ss_dssp HHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTTCCCCCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHHHCCCCchhhCccHHHHHHHHhcCCCCCcccccCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 9999999999 665432 222333334344344333333344559999999999999999999986
No 191
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=99.97 E-value=8.3e-32 Score=294.40 Aligned_cols=205 Identities=16% Similarity=0.161 Sum_probs=153.0
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..+|.+++||||+++++ ++.... .+|+|||| .+++|.+++.+....+++.+++.++.||+.||.|||++||
T Consensus 93 ~~~E~~~l~~l~h~niv~~~~-~~~~~~---~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i 168 (373)
T 2qol_A 93 FLGEASIMGQFDHPNIIRLEG-VVTKSK---PVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY 168 (373)
T ss_dssp HHHHHHHHTTCCCTTBCCEEE-EECSSS---SCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhCCCCCCCeEEE-EEeeCC---ceEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 347888999999999999999 554443 57999999 7999999997766679999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.+||+|||+++........ ..
T Consensus 169 vH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~-------------------------------~~------------ 205 (373)
T 2qol_A 169 VHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEA-------------------------------AY------------ 205 (373)
T ss_dssp CCSCCCGGGEEECTTCCEEECCC---------------------------------------------------------
T ss_pred eCCCCCcceEEEcCCCCEEECcCccccccccCCcc-------------------------------ce------------
Confidence 99999999999999999999999987443211000 00
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......+|+.|+|||++.+..++.++|||||||++|
T Consensus 206 --------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ 241 (373)
T 2qol_A 206 --------------------------------------------TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLW 241 (373)
T ss_dssp ----------------------------------------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred --------------------------------------------eccCCCcCCCccChhhhccCCcCchhcHHHHHHHHH
Confidence 000024578899999999888999999999999999
Q ss_pred hccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 303 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 303 eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
||++ ||...... .....+..+..++......+...+|+.+||+.||.+||++.++++
T Consensus 242 ellt~g~~P~~~~~~~-~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~ 302 (373)
T 2qol_A 242 EVMSYGERPYWEMSNQ-DVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS 302 (373)
T ss_dssp HHHTTC-CTTTTCCHH-HHHHHHHTTEECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHhCCCCCCCCCCHH-HHHHHHHcCCCCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHH
Confidence 9886 66655443 333444433222222222334559999999999999999999985
No 192
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=99.97 E-value=2.5e-32 Score=287.88 Aligned_cols=210 Identities=14% Similarity=0.132 Sum_probs=151.8
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH---
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAH--- 138 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLH--- 138 (720)
..+.+...+..++||||+++++.+.........+|+|||| .+++|.++++.. .+++..++.++.||+.||.|||
T Consensus 48 ~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~ 125 (301)
T 3q4u_A 48 FRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLT--TLDTVSCLRIVLSIASGLAHLHIEI 125 (301)
T ss_dssp HHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEEECCCTTCBHHHHHTTC--CBCHHHHHHHHHHHHHHHHHHHSCB
T ss_pred HHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEehhhccCCCHHHHHhhc--ccCHHHHHHHHHHHHHHHHHHHHhh
Confidence 3345555555589999999999555444444568999999 889999999543 4999999999999999999999
Q ss_pred -----HcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccc
Q 004998 139 -----SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLV 213 (720)
Q Consensus 139 -----s~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla 213 (720)
++||+||||||+|||++.++.+||+|||++......... .
T Consensus 126 ~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~--------------------------------~--- 170 (301)
T 3q4u_A 126 FGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQ--------------------------------L--- 170 (301)
T ss_dssp CSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTE--------------------------------E---
T ss_pred hhccCCCCeecCCCChHhEEEcCCCCEEEeeCCCeeeccccccc--------------------------------c---
Confidence 999999999999999999999999999887432111000 0
Q ss_pred cCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC------C
Q 004998 214 TAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA------P 287 (720)
Q Consensus 214 ~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~------~ 287 (720)
........||+.|+|||++.+. .
T Consensus 171 ---------------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~ 199 (301)
T 3q4u_A 171 ---------------------------------------------------DVGNNPRVGTKRYMAPEVLDETIQVDCFD 199 (301)
T ss_dssp ---------------------------------------------------ECCCCCCCCCGGGCCHHHHTTCCCTTCHH
T ss_pred ---------------------------------------------------cccccccccccceeChhhhcCcCCCCccc
Confidence 0000114789999999999877 4
Q ss_pred CCccccchhhhhhhhhcccc-------------CCCC----chHHHHHHHhhcCCCCccccc------cCchHHHHHHHc
Q 004998 288 VSCASDIYRLGVLLFELFCP-------------FSTG----EEKTRTMSSLRHRVLPPQLLL------KFPKEASFCLWL 344 (720)
Q Consensus 288 ~s~~sDIwSLGvll~eLltp-------------f~~~----~~~~~~~~~l~~~~~p~~~~~------~~p~~~~li~~~ 344 (720)
++.++|||||||++|||+++ |... .........+......+.++. ..+...+|+.+|
T Consensus 200 ~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 279 (301)
T 3q4u_A 200 SYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKEC 279 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHH
T ss_pred CCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCCcchhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHH
Confidence 56799999999999999974 3221 111222222222222222211 112345999999
Q ss_pred CCCCCCCCCChHHHHc
Q 004998 345 LHPEPSGRPKMGELLQ 360 (720)
Q Consensus 345 L~~dP~~Rpta~eiL~ 360 (720)
|+.||.+|||+.++++
T Consensus 280 l~~dP~~Rps~~~i~~ 295 (301)
T 3q4u_A 280 WYQNPSARLTALRIKK 295 (301)
T ss_dssp CCSSGGGSCCHHHHHH
T ss_pred hhcChhhCCCHHHHHH
Confidence 9999999999999986
No 193
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.97 E-value=1.1e-31 Score=281.65 Aligned_cols=206 Identities=13% Similarity=0.110 Sum_probs=161.7
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++.+++||||+++++ ++..+ .+++|||| .+++|.+++......+++..++.++.||+.||.|||++|
T Consensus 56 ~~~~E~~~l~~l~h~~i~~~~~-~~~~~----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ 130 (287)
T 1u59_A 56 EMMREAQIMHQLDNPYIVRLIG-VCQAE----ALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKN 130 (287)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EEESS----SEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCEeEEEE-EecCC----CcEEEEEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3447888999999999999999 55433 47999999 889999999666666999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++.++|+|||.+...+..... .
T Consensus 131 i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~--------------------------------~----------- 167 (287)
T 1u59_A 131 FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSY--------------------------------Y----------- 167 (287)
T ss_dssp EECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCE--------------------------------E-----------
T ss_pred EeeCCCchheEEEcCCCCEEECcccceeeeccCcce--------------------------------e-----------
Confidence 999999999999999999999999988543221000 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
.......||+.|+|||++.+..++.++|||||||++
T Consensus 168 --------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 203 (287)
T 1u59_A 168 --------------------------------------------TARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTM 203 (287)
T ss_dssp --------------------------------------------CCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHH
T ss_pred --------------------------------------------eccccccccccccCHHHhccCCCCchhhHHHHHHHH
Confidence 000013568899999999888899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004998 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~h 361 (720)
|||++ ||...... ..+..+.....++......+...+||.+||..||.+||++.+++++
T Consensus 204 ~ellt~g~~p~~~~~~~-~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~ 266 (287)
T 1u59_A 204 WEALSYGQKPYKKMKGP-EVMAFIEQGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQR 266 (287)
T ss_dssp HHHHTTSCCTTTTCCTH-HHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred HHHHcCCCCCcccCCHH-HHHHHHhcCCcCCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 99997 66554433 3444444443333322333445599999999999999999999974
No 194
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=99.97 E-value=8.8e-32 Score=285.37 Aligned_cols=205 Identities=16% Similarity=0.177 Sum_probs=158.7
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC-----------------------CCC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-----------------------RSV 118 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~-----------------------~~l 118 (720)
+..+|..+|.+++||||+++++ ++.... .+|+|||| .|++|.+++.... ..+
T Consensus 72 ~~~~E~~~l~~l~hp~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (314)
T 2ivs_A 72 DLLSEFNVLKQVNHPHVIKLYG-ACSQDG---PLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERAL 147 (314)
T ss_dssp HHHHHHHHHTTCCCTTBCCEEE-EECSSS---SCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEE
T ss_pred HHHHHHHHHhhCCCCceeeEEE-EEecCC---ceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCc
Confidence 3447888999999999999999 554443 57999999 8899999995432 238
Q ss_pred CHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhh
Q 004998 119 DVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDM 198 (720)
Q Consensus 119 ~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (720)
++.+++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++.........
T Consensus 148 ~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~--------------------- 206 (314)
T 2ivs_A 148 TMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSY--------------------- 206 (314)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTEEEECCCTTCEECTTTSCE---------------------
T ss_pred CHHHHHHHHHHHHHHHHHHHHCCCcccccchheEEEcCCCCEEEccccccccccccccc---------------------
Confidence 99999999999999999999999999999999999999999999999987433211000
Q ss_pred HhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCccc
Q 004998 199 LQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYA 278 (720)
Q Consensus 199 ~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~ 278 (720)
.......+|+.|+
T Consensus 207 -------------------------------------------------------------------~~~~~~~~~~~y~ 219 (314)
T 2ivs_A 207 -------------------------------------------------------------------VKRSQGRIPVKWM 219 (314)
T ss_dssp -------------------------------------------------------------------ECSSCCCSCGGGC
T ss_pred -------------------------------------------------------------------eeccCCCCccccc
Confidence 0000135688999
Q ss_pred CCccccCCCCCccccchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCC
Q 004998 279 SPEELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK 354 (720)
Q Consensus 279 APE~l~~~~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpt 354 (720)
|||++.+..++.++|||||||++|||++ ||...... .....+.....++......+...+|+.+||+.||.+|||
T Consensus 220 aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps 298 (314)
T 2ivs_A 220 AIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPE-RLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPV 298 (314)
T ss_dssp CHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG-GHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred ChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-HHHHHhhcCCcCCCCccCCHHHHHHHHHHccCChhhCcC
Confidence 9999998889999999999999999997 56544332 333444444333332233345569999999999999999
Q ss_pred hHHHHc
Q 004998 355 MGELLQ 360 (720)
Q Consensus 355 a~eiL~ 360 (720)
+.++++
T Consensus 299 ~~~l~~ 304 (314)
T 2ivs_A 299 FADISK 304 (314)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999986
No 195
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=99.97 E-value=6.2e-32 Score=282.56 Aligned_cols=203 Identities=21% Similarity=0.194 Sum_probs=157.0
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++.+++||||+++++ ++.++ ..|++||| .+++|.+++......+++..++.++.||+.||.|||++|
T Consensus 59 ~~~~E~~~l~~l~h~~i~~~~~-~~~~~----~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ 133 (281)
T 3cc6_A 59 KFMSEAVIMKNLDHPHIVKLIG-IIEEE----PTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESIN 133 (281)
T ss_dssp HHHHHHHHHHHHCCTTBCCEEE-EECSS----SCEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCcceEEE-EEcCC----CCEEEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3447888999999999999999 55443 35899999 889999999665556999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++.+||+|||.+.........
T Consensus 134 i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-------------------------------------------- 169 (281)
T 3cc6_A 134 CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYY-------------------------------------------- 169 (281)
T ss_dssp CCCCCCSGGGEEEEETTEEEECCCCGGGCC--------------------------------------------------
T ss_pred cccCCCccceEEECCCCcEEeCccCCCccccccccc--------------------------------------------
Confidence 999999999999999999999999887433211000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......+|+.|+|||++.+..++.++|||||||++
T Consensus 170 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 204 (281)
T 3cc6_A 170 ---------------------------------------------KASVTRLPIKWMSPESINFRRFTTASDVWMFAVCM 204 (281)
T ss_dssp ------------------------------------------------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred ---------------------------------------------ccccCCCCcceeCchhhccCCCCchhccHHHHHHH
Confidence 00013468899999999888899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||...... .....+.....++......+...+|+.+||+.||.+|||+.|+++
T Consensus 205 ~~llt~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~ 266 (281)
T 3cc6_A 205 WEILSFGKQPFFWLENK-DVIGVLEKGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVC 266 (281)
T ss_dssp HHHHTTTCCTTTTSCGG-GHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHhCCCCCcccCChH-HHHHHHhcCCCCCCCCCCCHHHHHHHHHHccCCchhCcCHHHHHH
Confidence 99997 56543332 223333333333322223344569999999999999999999986
No 196
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=99.97 E-value=7.4e-32 Score=289.83 Aligned_cols=205 Identities=15% Similarity=0.130 Sum_probs=159.5
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC-----------------------CCC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-----------------------RSV 118 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~-----------------------~~l 118 (720)
+..+|..++.+++||||+++++ ++.... .+|+|||| .+++|.++|.... ..+
T Consensus 96 ~~~~E~~~l~~l~hp~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 171 (343)
T 1luf_A 96 DFQREAALMAEFDNPNIVKLLG-VCAVGK---PMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPL 171 (343)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEE-EECSSS---SCEEEEECCTTCBHHHHHHHTCC----------------------CCC
T ss_pred HHHHHHHHHHhCCCCCEEEEEE-EEccCC---ceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCC
Confidence 3447888999999999999999 555443 57999999 8899999995421 458
Q ss_pred CHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhh
Q 004998 119 DVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDM 198 (720)
Q Consensus 119 ~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (720)
++.+++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 172 ~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~------------------------ 227 (343)
T 1luf_A 172 SCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSA------------------------ 227 (343)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGG------------------------
T ss_pred CHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEECCCCeEEEeecCCCcccccC------------------------
Confidence 99999999999999999999999999999999999999999999999887332110
Q ss_pred HhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCccc
Q 004998 199 LQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYA 278 (720)
Q Consensus 199 ~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~ 278 (720)
+. ........||+.|+
T Consensus 228 ----------~~------------------------------------------------------~~~~~~~~~t~~y~ 243 (343)
T 1luf_A 228 ----------DY------------------------------------------------------YKADGNDAIPIRWM 243 (343)
T ss_dssp ----------GC------------------------------------------------------BC----CCBCGGGC
T ss_pred ----------cc------------------------------------------------------ccccCCCcccceec
Confidence 00 00001135789999
Q ss_pred CCccccCCCCCccccchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCC
Q 004998 279 SPEELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK 354 (720)
Q Consensus 279 APE~l~~~~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpt 354 (720)
|||++.+..++.++|||||||++|||++ ||...... .....+..+..++......+...+|+.+||+.||.+||+
T Consensus 244 aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps 322 (343)
T 1luf_A 244 PPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHE-EVIYYVRDGNILACPENCPLELYNLMRLCWSKLPADRPS 322 (343)
T ss_dssp CHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH-HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred ChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCChH-HHHHHHhCCCcCCCCCCCCHHHHHHHHHHcccCcccCCC
Confidence 9999998889999999999999999997 66554443 344444444433322222334559999999999999999
Q ss_pred hHHHHc
Q 004998 355 MGELLQ 360 (720)
Q Consensus 355 a~eiL~ 360 (720)
+.++++
T Consensus 323 ~~~~~~ 328 (343)
T 1luf_A 323 FCSIHR 328 (343)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999986
No 197
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=99.97 E-value=4.1e-32 Score=290.45 Aligned_cols=203 Identities=16% Similarity=0.176 Sum_probs=139.2
Q ss_pred hcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhC----CCCCCCHHHHHHHHHHHHHHHHHHHHc-Ccee
Q 004998 70 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK----PKRSVDVYECLHIFRQIVEIVYAAHSQ-GIVV 144 (720)
Q Consensus 70 ~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~----~~~~l~~~~~~~i~~QIl~aL~yLHs~-gIvH 144 (720)
++..++||||+++++ ++.... .+|+||||..++|.+++.. ....+++..+..++.||+.||.|||++ ||+|
T Consensus 74 ~~~~~~h~niv~~~~-~~~~~~---~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH 149 (327)
T 3aln_A 74 VMRSSDCPYIVQFYG-ALFREG---DCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIH 149 (327)
T ss_dssp HHSSCCCTTBCCEEE-EEECSS---EEEEEECCCSEEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCC
T ss_pred HHHcCCCCcEeeeee-EEEeCC---ceEEEEeecCCChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeE
Confidence 678899999999999 454443 6799999966799988842 245599999999999999999999999 9999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+|||++.++.+||+|||++.......
T Consensus 150 ~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~------------------------------------------------- 180 (327)
T 3aln_A 150 RDIKPSNILLDRSGNIKLCDFGISGQLVDSI------------------------------------------------- 180 (327)
T ss_dssp SCCCGGGEEEETTTEEEECCCSSSCC------------------------------------------------------
T ss_pred CCCCHHHEEEcCCCCEEEccCCCceeccccc-------------------------------------------------
Confidence 9999999999999999999998874321110
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccc----cCCCCCccccchhhhhh
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEEL----AGAPVSCASDIYRLGVL 300 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l----~~~~~s~~sDIwSLGvl 300 (720)
......||+.|+|||++ .+..++.++|||||||+
T Consensus 181 ------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~i 218 (327)
T 3aln_A 181 ------------------------------------------AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGIT 218 (327)
T ss_dssp -------------------------------------------------------------------CCSHHHHHHHHHH
T ss_pred ------------------------------------------ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHH
Confidence 00013679999999999 45558999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCc---cccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPP---QLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p~---~~~~~~-p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
+|||++ ||.........+..+.....+. .....+ +...+|+.+||+.||.+|||+.++++||||...
T Consensus 219 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~~ 292 (327)
T 3aln_A 219 LYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFILMY 292 (327)
T ss_dssp HHHHHHSCCCSSCC-------CCCCCSCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHH
T ss_pred HHHHHHCCCCCCCcchHHHHHHHHhcCCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhChHHHHh
Confidence 999999 6665433322222222222221 111223 445599999999999999999999999999764
No 198
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=99.97 E-value=7e-32 Score=302.34 Aligned_cols=200 Identities=16% Similarity=0.132 Sum_probs=156.1
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~-~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
..+|..+|.+++|||||++++++..... .+|+|||| .+++|.++|...+ ..+++..++.++.||+.||.|||++|
T Consensus 233 ~~~E~~~l~~l~h~niv~~~~~~~~~~~---~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ 309 (450)
T 1k9a_A 233 FLAEASVMTQLRHSNLVQLLGVIVEEKG---GLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN 309 (450)
T ss_dssp HHHHHHHHHTCCCTTBCCEEEEEECTTS---CEEEEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhccCCCEEEEEEEEEcCCC---ceEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3478889999999999999994443332 57999999 8899999995443 34799999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||+++.....
T Consensus 310 ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~----------------------------------------------- 342 (450)
T 1k9a_A 310 FVHRDLAARNVLVSEDNVAKVSDFGLTKEASST----------------------------------------------- 342 (450)
T ss_dssp EECSCCCGGGEEECTTSCEEECCCTTCEECC-------------------------------------------------
T ss_pred eeCCCCCHhhEEECCCCCEEEeeCCCccccccc-----------------------------------------------
Confidence 999999999999999999999998887321100
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
.....+++.|+|||++.+..++.++|||||||++
T Consensus 343 ----------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l 376 (450)
T 1k9a_A 343 ----------------------------------------------QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILL 376 (450)
T ss_dssp --------------------------------------------------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHH
T ss_pred ----------------------------------------------ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHH
Confidence 0002457889999999998999999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||...... .....+..+..++......+...+||.+||+.||.+|||+.++++
T Consensus 377 ~el~t~g~~P~~~~~~~-~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~ 438 (450)
T 1k9a_A 377 WEIYSFGRVPYPRIPLK-DVVPRVEKGYKMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLRE 438 (450)
T ss_dssp HHHHTTTCCSSTTSCTT-THHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHhCCCCCCCCCCHH-HHHHHHHcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 99997 67654333 233344444333322223344559999999999999999999985
No 199
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=99.97 E-value=1e-31 Score=284.83 Aligned_cols=205 Identities=15% Similarity=0.177 Sum_probs=158.9
Q ss_pred eeehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCC-----------------CCCHHHHH
Q 004998 64 KHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKR-----------------SVDVYECL 124 (720)
Q Consensus 64 ~~~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~-----------------~l~~~~~~ 124 (720)
..+|..+|.++ +||||+++++ ++..+. .+++|||| .+++|.+++..... .+++.+++
T Consensus 73 ~~~E~~~l~~l~~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (313)
T 1t46_A 73 LMSELKVLSYLGNHMNIVNLLG-ACTIGG---PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 148 (313)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EECSSS---SCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHH
T ss_pred HHHHHHHHhhcccCCCeeeEEE-EEecCC---CcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHH
Confidence 34778889999 9999999999 555543 56999999 78999999954332 48999999
Q ss_pred HHHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhc
Q 004998 125 HIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTR 204 (720)
Q Consensus 125 ~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 204 (720)
.++.||+.||.|||++||+||||||+||+++.++.+||+|||.+...+....
T Consensus 149 ~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~---------------------------- 200 (313)
T 1t46_A 149 SFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSN---------------------------- 200 (313)
T ss_dssp HHHHHHHHHHHHHHHTTCCCSCCSGGGEEEETTTEEEECCCGGGSCTTSCTT----------------------------
T ss_pred HHHHHHHHHHHHHHHCCeecCCCccceEEEcCCCCEEEcccccccccccccc----------------------------
Confidence 9999999999999999999999999999999999999999988754322100
Q ss_pred ccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCcccc
Q 004998 205 LRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA 284 (720)
Q Consensus 205 ~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 284 (720)
+ .......||+.|+|||++.
T Consensus 201 -----~-------------------------------------------------------~~~~~~~~~~~y~aPE~~~ 220 (313)
T 1t46_A 201 -----Y-------------------------------------------------------VVKGNARLPVKWMAPESIF 220 (313)
T ss_dssp -----S-------------------------------------------------------EECSSSEECGGGCCHHHHH
T ss_pred -----c-------------------------------------------------------eeccCCCCcceeeChHHhc
Confidence 0 0000135688999999998
Q ss_pred CCCCCccccchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 285 GAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 285 ~~~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
+..++.++|||||||++|||++ ||............+.....+.......+...+|+.+||++||.+|||+.|+++
T Consensus 221 ~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 300 (313)
T 1t46_A 221 NCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 300 (313)
T ss_dssp HCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhHHHHHhccCCCCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 8889999999999999999997 665544333344444433322222223344559999999999999999999986
No 200
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=99.97 E-value=7.3e-32 Score=283.83 Aligned_cols=208 Identities=14% Similarity=0.125 Sum_probs=156.5
Q ss_pred ehhhhcccC-CCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
+|..++..+ +||||+++++ ++.... ..|+||||.+++|.+++...+..+++.+++.++.||+.||.|||++||+|
T Consensus 54 ~e~~~~~~l~~~~~i~~~~~-~~~~~~---~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH 129 (298)
T 1csn_A 54 DEYRTYKLLAGCTGIPNVYY-FGQEGL---HNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVY 129 (298)
T ss_dssp HHHHHHHHTTTCTTCCCEEE-EEEETT---EEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEEC
T ss_pred HHHHHHHHHhcCCCCCeEEe-ecCCCc---eeEEEEEecCCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCEec
Confidence 566677777 7999999999 554443 67999999999999999766666999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCc-----eEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004998 145 HNVRPSCFVMSSFNH-----VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 145 rDLKP~NILl~~~~~-----vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
|||||+|||++.++. +||+|||++........... .
T Consensus 130 ~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~------------------------------~--------- 170 (298)
T 1csn_A 130 RDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQH------------------------------I--------- 170 (298)
T ss_dssp CCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCB------------------------------C---------
T ss_pred CCCCHHHEEeccCCCCCCCeEEEEECcccccccccccccc------------------------------c---------
Confidence 999999999987766 99999998854322110000 0
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhh
Q 004998 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
.........||+.|+|||++.+..++.++|||||||
T Consensus 171 --------------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~ 206 (298)
T 1csn_A 171 --------------------------------------------PYREKKNLSGTARYMSINTHLGREQSRRDDLEALGH 206 (298)
T ss_dssp --------------------------------------------CCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHH
T ss_pred --------------------------------------------cccCccCCCCCcccCCchhhcCCCCChHHHHHHHHH
Confidence 000011257899999999999988999999999999
Q ss_pred hhhhccc---cCCCCc--hHHHHHHHhhcC---CCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 300 LLFELFC---PFSTGE--EKTRTMSSLRHR---VLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 300 ll~eLlt---pf~~~~--~~~~~~~~l~~~---~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
++|||++ ||.... .....+..+... ...+.+...+| ...+|+.+||..||.+||++.+|++
T Consensus 207 il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~ 276 (298)
T 1csn_A 207 VFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQG 276 (298)
T ss_dssp HHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred HHHHHHcCCCCcchhhccccHHHHHHHHhhccCccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHH
Confidence 9999999 676532 122222222221 12222333444 4459999999999999999999985
No 201
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=99.97 E-value=2.7e-31 Score=283.80 Aligned_cols=208 Identities=14% Similarity=0.122 Sum_probs=154.9
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC---CCCCCHHHHHHHHHHHHHHHHHHH
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---KRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~---~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
+..+|..++..++||||+++++ ++.... ..++|||| .+++|.+++... ...+++..++.++.||+.||.|||
T Consensus 73 ~~~~e~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH 148 (326)
T 3uim_A 73 QFQTEVEMISMAVHRNLLRLRG-FCMTPT---ERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLH 148 (326)
T ss_dssp HHHHHHHGGGTCCCTTBCCCCE-EECCSS---CCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCCccceEE-EEecCC---ceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 4457788999999999999999 555443 46899999 899999999543 334899999999999999999999
Q ss_pred Hc---CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccC
Q 004998 139 SQ---GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTA 215 (720)
Q Consensus 139 s~---gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~ 215 (720)
++ ||+||||||+|||++.++.+||+|||++...+.....
T Consensus 149 ~~~~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-------------------------------------- 190 (326)
T 3uim_A 149 DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH-------------------------------------- 190 (326)
T ss_dssp HSSSSCEECCCCSGGGEEECTTCCEEECCCSSCEECCSSSSC--------------------------------------
T ss_pred hCCCCCeEeCCCchhhEEECCCCCEEeccCccccccCccccc--------------------------------------
Confidence 99 9999999999999999999999999887432111000
Q ss_pred CCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccch
Q 004998 216 PTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIY 295 (720)
Q Consensus 216 ~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIw 295 (720)
......||+.|+|||++.+..++.++|||
T Consensus 191 ---------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~ 219 (326)
T 3uim_A 191 ---------------------------------------------------VTTAVRGTIGHIAPEYLSTGKSSEKTDVF 219 (326)
T ss_dssp ---------------------------------------------------EECCCCSCGGGCCHHHHHHSEECHHHHHH
T ss_pred ---------------------------------------------------ccccccCCcCccCHHHhccCCCCccccch
Confidence 00113589999999999888899999999
Q ss_pred hhhhhhhhccc---cCCCCc-------hHHHHHHHh-hcCC----CCcccccc-----CchHHHHHHHcCCCCCCCCCCh
Q 004998 296 RLGVLLFELFC---PFSTGE-------EKTRTMSSL-RHRV----LPPQLLLK-----FPKEASFCLWLLHPEPSGRPKM 355 (720)
Q Consensus 296 SLGvll~eLlt---pf~~~~-------~~~~~~~~l-~~~~----~p~~~~~~-----~p~~~~li~~~L~~dP~~Rpta 355 (720)
||||++|||++ ||.... ......... .... ........ .+...+|+.+||+.||.+|||+
T Consensus 220 slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~ 299 (326)
T 3uim_A 220 GYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKM 299 (326)
T ss_dssp HHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCH
T ss_pred hHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCH
Confidence 99999999999 553110 000111111 1110 01111111 1234599999999999999999
Q ss_pred HHHHcCcc
Q 004998 356 GELLQSEF 363 (720)
Q Consensus 356 ~eiL~hp~ 363 (720)
.|+++|-.
T Consensus 300 ~ell~~L~ 307 (326)
T 3uim_A 300 SEVVRMLE 307 (326)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhc
Confidence 99998654
No 202
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=99.97 E-value=1.2e-31 Score=285.07 Aligned_cols=202 Identities=16% Similarity=0.207 Sum_probs=150.5
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..++.+++||||+++++ ++..+. .+|++||| .|++|.+++.... .+++.+++.++.||+.||.|||++||
T Consensus 81 ~~~e~~~l~~l~hp~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~i 155 (309)
T 2h34_A 81 MQREARTAGRLQEPHVVPIHD-FGEIDG---QLYVDMRLINGVDLAAMLRRQG-PLAPPRAVAIVRQIGSALDAAHAAGA 155 (309)
T ss_dssp HHHHHHHHTTCCCTTBCCEEE-EEEETT---EEEEEEECCCCEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhhcCCCCeeEEEE-EEeeCC---eEEEEEEecCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCcC
Confidence 347888999999999999999 554443 67999999 7889999995543 49999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.+||+|||.+.........
T Consensus 156 ~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~--------------------------------------------- 190 (309)
T 2h34_A 156 THRDVKPENILVSADDFAYLVDFGIASATTDEKLT--------------------------------------------- 190 (309)
T ss_dssp CCSCCCGGGEEECTTSCEEECSCCC-------------------------------------------------------
T ss_pred CcCCCChHHEEEcCCCCEEEecCccCccccccccc---------------------------------------------
Confidence 99999999999999999999999887432111000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......||+.|+|||++.+..++.++|||||||++|
T Consensus 191 --------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ 226 (309)
T 2h34_A 191 --------------------------------------------QLGNTVGTLYYMAPERFSESHATYRADIYALTCVLY 226 (309)
T ss_dssp --------------------------------------------------CCGGGCCGGGTCC----CCCHHHHHHHHHH
T ss_pred --------------------------------------------cccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHH
Confidence 001146899999999999888999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCCCC-ccccccCch-HHHHHHHcCCCCCCCCC-ChHHHHc
Q 004998 303 ELFC---PFSTGEEKTRTMSSLRHRVLP-PQLLLKFPK-EASFCLWLLHPEPSGRP-KMGELLQ 360 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~~~p-~~~~~~~p~-~~~li~~~L~~dP~~Rp-ta~eiL~ 360 (720)
||++ ||...... .....+.....+ ......+|. ..+||.+||+.||.+|| +++++++
T Consensus 227 ~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~ 289 (309)
T 2h34_A 227 ECLTGSPPYQGDQLS-VMGAHINQAIPRPSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSA 289 (309)
T ss_dssp HHHHSSCSSCSCHHH-HHHHHHHSCCCCGGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHH
T ss_pred HHHHCCCCCCCchHH-HHHHHhccCCCCccccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHH
Confidence 9999 67655433 233333333222 233344454 45999999999999999 8888775
No 203
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=99.97 E-value=3.9e-31 Score=281.23 Aligned_cols=208 Identities=17% Similarity=0.178 Sum_probs=157.2
Q ss_pred eeeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004998 62 LRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 62 ~r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
.+..+|..++.+++||||+++++ ++.... .++++||| .|++|.+++......+++..++.++.||+.||.|||++
T Consensus 74 ~~~~~e~~~l~~l~h~~iv~~~~-~~~~~~---~~~iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~ 149 (319)
T 2y4i_B 74 KAFKREVMAYRQTRHENVVLFMG-ACMSPP---HLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAK 149 (319)
T ss_dssp CCCCTTGGGGTTCCCTTBCCCCE-EEECSS---CEEEECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcCCCCCEeEEEE-EEecCC---ceEEEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 34557888999999999999999 554443 57999999 78999999976666799999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004998 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+|||++ ++.++|+|||++...+..... .
T Consensus 150 ~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~--------------------------------~---------- 186 (319)
T 2y4i_B 150 GILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAG--------------------------------R---------- 186 (319)
T ss_dssp TCCCCCCCSTTEEEC---CCEECCCSCCC---------------------------------------------------
T ss_pred CccccCCChhhEEEe-CCCEEEeecCCcccccccccc--------------------------------c----------
Confidence 999999999999997 689999999987433211000 0
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC---------CCCCcc
Q 004998 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG---------APVSCA 291 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~---------~~~s~~ 291 (720)
.........||+.|+|||++.+ ..++.+
T Consensus 187 -------------------------------------------~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~ 223 (319)
T 2y4i_B 187 -------------------------------------------REDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKH 223 (319)
T ss_dssp --------------------------------------------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHH
T ss_pred -------------------------------------------cccccccCCCcccccChHHhhhccccccccccCCCch
Confidence 0000011368999999999975 347899
Q ss_pred ccchhhhhhhhhccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 292 SDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 292 sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
+|||||||++|||++ ||...... .....+.....+......+ +...+|+.+||+.||.+|||+.++++
T Consensus 224 ~Di~slG~il~el~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~ 295 (319)
T 2y4i_B 224 SDVFALGTIWYELHAREWPFKTQPAE-AIIWQMGTGMKPNLSQIGMGKEISDILLFCWAFEQEERPTFTKLMD 295 (319)
T ss_dssp HHHHHHHHHHHHHHHSSCSSSSCCHH-HHHHHHHTTCCCCCCCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHH
T ss_pred hhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHhccCCCCCCCcCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 999999999999999 67655443 3334444444443333233 45569999999999999999999986
No 204
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=99.97 E-value=1.8e-31 Score=285.09 Aligned_cols=205 Identities=18% Similarity=0.248 Sum_probs=157.7
Q ss_pred eeeehhhhcccCC--CCCceecccceeecCCCCCcEEEEEec-CC-CCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 004998 63 RKHSDGVELTHGD--HLRNQGGLSGVCENEAAIDPFVHAIEW-GD-VSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 63 r~~~e~~~Ls~l~--HpnIV~l~~~~~~~~~~~~~~~lv~E~-~g-gsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
+..+|..++.++. ||||+++++ ++.... .++++||+ .+ ++|.+++.... .+++..++.++.||+.||.|||
T Consensus 92 ~~~~E~~~l~~l~~~~~~i~~~~~-~~~~~~---~~~lv~e~~~~~~~L~~~l~~~~-~l~~~~~~~i~~qi~~~L~~LH 166 (320)
T 3a99_A 92 RVPMEVVLLKKVSSGFSGVIRLLD-WFERPD---SFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCH 166 (320)
T ss_dssp EEEHHHHHHHHHCSSSCSBCCEEE-EEECSS---EEEEEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhccCCCCceEEEE-EEecCC---cEEEEEEcCCCCccHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH
Confidence 4456777888886 599999999 555443 57999999 44 89999995543 4999999999999999999999
Q ss_pred HcCceeccCCCCcEEEc-cCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCC
Q 004998 139 SQGIVVHNVRPSCFVMS-SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~-~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~ 217 (720)
++||+||||||+|||++ .++.+||+|||++.......
T Consensus 167 ~~~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~~~~~~~------------------------------------------ 204 (320)
T 3a99_A 167 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV------------------------------------------ 204 (320)
T ss_dssp HTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCSSC------------------------------------------
T ss_pred HCCcEeCCCCHHHEEEeCCCCCEEEeeCcccccccccc------------------------------------------
Confidence 99999999999999999 78899999988874321100
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCC-Cccccchh
Q 004998 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYR 296 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~-s~~sDIwS 296 (720)
.....||+.|+|||++.+..+ +.++||||
T Consensus 205 --------------------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~~Di~s 234 (320)
T 3a99_A 205 --------------------------------------------------YTDFDGTRVYSPPEWIRYHRYHGRSAAVWS 234 (320)
T ss_dssp --------------------------------------------------BCCCCSCGGGSCHHHHHHSCBCHHHHHHHH
T ss_pred --------------------------------------------------ccCCCCCccCCChHHhccCCCCCccchHHh
Confidence 001358999999999987765 78999999
Q ss_pred hhhhhhhccccCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCCccc
Q 004998 297 LGVLLFELFCPFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 297 LGvll~eLltpf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
|||++|||+++..++....... ..... +.... +...+||.+||+.||.+|||+.|+++||||+....+
T Consensus 235 lG~il~el~~g~~pf~~~~~~~---~~~~~---~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~hp~~~~~~~~ 303 (320)
T 3a99_A 235 LGILLYDMVCGDIPFEHDEEII---RGQVF---FRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLP 303 (320)
T ss_dssp HHHHHHHHHHSSCSCCSHHHHH---HCCCC---CSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSCCCH
T ss_pred HHHHHHHHHHCCCCCCChhhhh---ccccc---ccccCCHHHHHHHHHHccCChhhCcCHHHHhcCHhhcCccCc
Confidence 9999999999333322222111 11111 11223 344599999999999999999999999999987543
No 205
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=99.97 E-value=5.6e-32 Score=292.17 Aligned_cols=211 Identities=13% Similarity=0.096 Sum_probs=156.4
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCceec
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 145 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHr 145 (720)
+|..++..++||||+++++.+.........+|+||||.|++|.+++...+ .+++.+++.|+.||+.||.|||++||+||
T Consensus 97 ~e~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~ivH~ 175 (345)
T 2v62_A 97 KKWIERKQLDYLGIPLFYGSGLTEFKGRSYRFMVMERLGIDLQKISGQNG-TFKKSTVLQLGIRMLDVLEYIHENEYVHG 175 (345)
T ss_dssp HHHHHHHTCSCCCCCCEEEEEEEESSSCEEEEEEEECEEEEHHHHCBGGG-BCCHHHHHHHHHHHHHHHHHHHHTTEECS
T ss_pred HHHHhhccccccCcceeecccccccCCCcEEEEEEeccCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeeCC
Confidence 56677888999999999995544333344789999999999999995544 59999999999999999999999999999
Q ss_pred cCCCCcEEEccCC--ceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 146 NVRPSCFVMSSFN--HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 146 DLKP~NILl~~~~--~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||+|||++.++ .+||+|||+++........ ..+
T Consensus 176 Dlkp~NIll~~~~~~~~kL~Dfg~a~~~~~~~~~------------------------------~~~------------- 212 (345)
T 2v62_A 176 DIKAANLLLGYKNPDQVYLADYGLSYRYCPNGNH------------------------------KQY------------- 212 (345)
T ss_dssp CCSGGGEEEESSSTTSEEECCCTTCEESSGGGCC------------------------------CCC-------------
T ss_pred CcCHHHEEEccCCCCcEEEEeCCCceeccccccc------------------------------ccc-------------
Confidence 9999999999877 9999999988543211000 000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
.........||+.|+|||++.+..++.++|||||||++||
T Consensus 213 ----------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~e 252 (345)
T 2v62_A 213 ----------------------------------------QENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLR 252 (345)
T ss_dssp ----------------------------------------CCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHH
T ss_pred ----------------------------------------hhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHH
Confidence 0000012478999999999999989999999999999999
Q ss_pred ccc---cCCCCchHHHHH---HHhhcCCCCccccc-----cCc-hHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 304 LFC---PFSTGEEKTRTM---SSLRHRVLPPQLLL-----KFP-KEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~---~~l~~~~~p~~~~~-----~~p-~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|++ ||.......... .......+++.+.. .+| ...+|+.+||..||.+||++.+|++
T Consensus 253 ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~ 321 (345)
T 2v62_A 253 WLCGKLPWEQNLKDPVAVQTAKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKK 321 (345)
T ss_dssp HHHSSCTTGGGTTCHHHHHHHHHHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred HHhCCCCccccccccHHHHHHHHhhcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence 999 664321111111 11111223332211 333 4559999999999999999999986
No 206
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.97 E-value=1.4e-31 Score=277.06 Aligned_cols=202 Identities=15% Similarity=0.179 Sum_probs=158.5
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..++.+++||||+++++ ++.... .++++||| .+++|.+++......+++..++.++.||+.||.|||++||+
T Consensus 51 ~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~ 126 (267)
T 3t9t_A 51 IEEAEVMMKLSHPKLVQLYG-VCLEQA---PICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVI 126 (267)
T ss_dssp HHHHHHHHTCCCTTBCCEEE-EECSSS---SCEEEECCCTTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHhCCCCCEeeEEE-EEccCC---CeEEEEeCCCCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 46778999999999999999 554443 57999999 78999999976656699999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+||+++.++.++|+|||.+....... .
T Consensus 127 H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~----------------------------------~------------- 159 (267)
T 3t9t_A 127 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ----------------------------------Y------------- 159 (267)
T ss_dssp CSSCCGGGEEECGGGCEEECCTTGGGGBCCHH----------------------------------H-------------
T ss_pred cCCCchheEEECCCCCEEEccccccccccccc----------------------------------c-------------
Confidence 99999999999999999999998874321100 0
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
. ......||+.|+|||++.+..++.++|||||||++|+
T Consensus 160 -----------------------~-------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ 197 (267)
T 3t9t_A 160 -----------------------T-------------------SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWE 197 (267)
T ss_dssp -----------------------H-------------------STTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred -----------------------c-------------------ccccccccccccChhhhcCCCccchhchhhhHHHHHH
Confidence 0 0001356889999999998889999999999999999
Q ss_pred ccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 304 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 304 Llt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|++ ||...... .....+.....+.......+...+|+.+||+.||.+|||+.++++
T Consensus 198 l~~~g~~p~~~~~~~-~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~ 257 (267)
T 3t9t_A 198 VFSEGKIPYENRSNS-EVVEDISTGFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLR 257 (267)
T ss_dssp HHTTSCCTTTTCCHH-HHHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HhccCCCCCCCCCHH-HHHHHHhcCCcCCCCccCcHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 998 55544333 344444444322222223344569999999999999999999986
No 207
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=99.97 E-value=8.9e-32 Score=285.63 Aligned_cols=208 Identities=20% Similarity=0.224 Sum_probs=160.7
Q ss_pred eeeehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCC---------------CCCHHHHHH
Q 004998 63 RKHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKR---------------SVDVYECLH 125 (720)
Q Consensus 63 r~~~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~---------------~l~~~~~~~ 125 (720)
+..+|..++.++ +||||+++++ ++.... ..++++||| .+++|.+++..... .+++..++.
T Consensus 76 ~~~~E~~~l~~l~~hp~iv~~~~-~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (316)
T 2xir_A 76 ALMSELKILIHIGHHLNVVNLLG-ACTKPG--GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 152 (316)
T ss_dssp HHHHHHHHHHHHCCCTTBCCEEE-EECCTT--SCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHH
T ss_pred HHHHHHHHHHhcccCCCeeeEEE-EEecCC--CceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHH
Confidence 344778888888 7999999999 443332 247999999 88999999965432 289999999
Q ss_pred HHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcc
Q 004998 126 IFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRL 205 (720)
Q Consensus 126 i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 205 (720)
++.||+.||.|||++||+||||||+||+++.++.+||+|||.+.......
T Consensus 153 ~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~------------------------------ 202 (316)
T 2xir_A 153 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP------------------------------ 202 (316)
T ss_dssp HHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCT------------------------------
T ss_pred HHHHHHHHHHHHHhCCcccccCccceEEECCCCCEEECCCccccccccCc------------------------------
Confidence 99999999999999999999999999999999999999998885432110
Q ss_pred cccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC
Q 004998 206 RREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG 285 (720)
Q Consensus 206 ~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 285 (720)
.. .......||+.|+|||++.+
T Consensus 203 ---~~-------------------------------------------------------~~~~~~~~t~~y~aPE~~~~ 224 (316)
T 2xir_A 203 ---DY-------------------------------------------------------VRKGDARLPLKWMAPETIFD 224 (316)
T ss_dssp ---TS-------------------------------------------------------EEETTEEECGGGCCHHHHHH
T ss_pred ---cc-------------------------------------------------------eeccCCCcceeecCchhhcc
Confidence 00 00011357899999999998
Q ss_pred CCCCccccchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004998 286 APVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 286 ~~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~h 361 (720)
..++.++|||||||++|||++ ||............+.....++......+...+|+.+||+.||.+|||+.|+++|
T Consensus 225 ~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~ 304 (316)
T 2xir_A 225 RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304 (316)
T ss_dssp CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred ccccchhHHHHHHHHHHHHHhCCCCCCcccchhHHHHHHhccCccCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 889999999999999999997 6655443334444444443333322334556699999999999999999999974
No 208
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.97 E-value=3e-31 Score=285.16 Aligned_cols=206 Identities=13% Similarity=0.146 Sum_probs=157.6
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++.+++||||+++++ ++.... .+++|||| .+++|.+++......+++.+++.++.||+.||.|||++|
T Consensus 92 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ 167 (333)
T 1mqb_A 92 DFLGEAGIMGQFSHHNIIRLEG-VISKYK---PMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMN 167 (333)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEE-EECSSS---SEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCCCcEEE-EEecCC---CcEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3447888999999999999999 554433 68999999 788999999766566999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||.+......... .+
T Consensus 168 ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~-------------------------------~~----------- 205 (333)
T 1mqb_A 168 YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEA-------------------------------TY----------- 205 (333)
T ss_dssp CCCSCCCGGGEEECTTCCEEECCCCC------------------------------------------------------
T ss_pred eeCCCCChheEEECCCCcEEECCCCcchhhcccccc-------------------------------cc-----------
Confidence 999999999999999999999999988443211000 00
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......+|+.|+|||++.+..++.++|||||||++
T Consensus 206 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 240 (333)
T 1mqb_A 206 ---------------------------------------------TTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVM 240 (333)
T ss_dssp --------------------------------------------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHH
T ss_pred ---------------------------------------------ccCCCCccccccCchhcccCCCCchhhhHHHHHHH
Confidence 00012468899999999988899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||...... ..+..+..+..++......+...+|+.+||+.||.+||++.++++
T Consensus 241 ~ellt~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~ 302 (333)
T 1mqb_A 241 WEVMTYGERPYWELSNH-EVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVS 302 (333)
T ss_dssp HHHHTTSCCTTTTCCHH-HHHHHHHTTCCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred HHHHcCCCCCcccCCHH-HHHHHHHCCCcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 99987 66554433 344445444333332223344559999999999999999999986
No 209
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=99.97 E-value=4.6e-32 Score=289.42 Aligned_cols=207 Identities=17% Similarity=0.235 Sum_probs=154.2
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC---CCCCHHHHHHHHHHHHHHHHHHH
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---RSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~---~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
+..+|..+|..++||||+++++ ++.... .+|+|||| .+++|.+++.... ..+++..++.++.||+.||.|||
T Consensus 81 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH 156 (321)
T 2qkw_B 81 EFETEIETLSFCRHPHLVSLIG-FCDERN---EMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH 156 (321)
T ss_dssp HHHHHHHGGGSCCCTTBCCEEE-ECCCTT---CCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCEeeEEE-EEcCCC---eEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhc
Confidence 3447888999999999999999 554443 56999999 8899999994432 34899999999999999999999
Q ss_pred HcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCC
Q 004998 139 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
++||+||||||+||+++.++.+||+|||++.........
T Consensus 157 ~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~----------------------------------------- 195 (321)
T 2qkw_B 157 TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQT----------------------------------------- 195 (321)
T ss_dssp HTTEECSCCCSTTEEECTTCCEEECCCTTCEECSSSSCC-----------------------------------------
T ss_pred CCCeecCCCCHHHEEECCCCCEEEeeccccccccccccc-----------------------------------------
Confidence 999999999999999999999999999887432111000
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhh
Q 004998 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
.......||+.|+|||++.+..++.++||||||
T Consensus 196 -----------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG 228 (321)
T 2qkw_B 196 -----------------------------------------------HLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFG 228 (321)
T ss_dssp -----------------------------------------------CCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHH
T ss_pred -----------------------------------------------ccccccCCCccccCHHHhcCCCCCcccchHhHH
Confidence 000113689999999999888899999999999
Q ss_pred hhhhhccc---cCCCCchH------HHHHHHhhcC----CCCccccccC-----chHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 299 VLLFELFC---PFSTGEEK------TRTMSSLRHR----VLPPQLLLKF-----PKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~------~~~~~~l~~~----~~p~~~~~~~-----p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|++|||++ ||...... .......... ...+.+.... +...+|+.+||+.||++|||+.|+++
T Consensus 229 ~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~ 308 (321)
T 2qkw_B 229 VVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLW 308 (321)
T ss_dssp HHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 99999999 55432211 0001111111 1112211111 23349999999999999999999996
Q ss_pred C
Q 004998 361 S 361 (720)
Q Consensus 361 h 361 (720)
+
T Consensus 309 ~ 309 (321)
T 2qkw_B 309 K 309 (321)
T ss_dssp H
T ss_pred H
Confidence 3
No 210
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=99.97 E-value=4.7e-32 Score=282.96 Aligned_cols=200 Identities=16% Similarity=0.127 Sum_probs=151.6
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~-~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
..+|..++.+++||||+++++.++.... .+|+|||| .+++|.+++.... ..+++..++.++.||+.||.|||++|
T Consensus 61 ~~~E~~~l~~l~h~~iv~~~~~~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ 137 (278)
T 1byg_A 61 FLAEASVMTQLRHSNLVQLLGVIVEEKG---GLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN 137 (278)
T ss_dssp HHHTHHHHTTCCCTTBCCEEEEECCC-----CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhCCCCCEeeEEEEEEcCCC---ceEEEEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3467889999999999999994333332 46999999 7889999995432 23799999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++.++|+|||.+...+..
T Consensus 138 i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~----------------------------------------------- 170 (278)
T 1byg_A 138 FVHRDLAARNVLVSEDNVAKVSDFGLTKEASST----------------------------------------------- 170 (278)
T ss_dssp CCCSCCSGGGEEECTTSCEEECCCCC------------------------------------------------------
T ss_pred ccccCCCcceEEEeCCCcEEEeecccccccccc-----------------------------------------------
Confidence 999999999999999999999999877322110
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
.....+++.|+|||++.+..++.++|||||||++
T Consensus 171 ----------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 204 (278)
T 1byg_A 171 ----------------------------------------------QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILL 204 (278)
T ss_dssp ---------------------------------------------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred ----------------------------------------------ccCCCccccccCHHHhCCCCCCchhcHHHHHHHH
Confidence 0002468889999999888899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||...... .....+.....++......+...+|+.+||+.||.+|||+.++++
T Consensus 205 ~~l~t~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~ 266 (278)
T 1byg_A 205 WEIYSFGRVPYPRIPLK-DVVPRVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLRE 266 (278)
T ss_dssp HHHHTTSCCSCTTSCGG-GHHHHHTTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHhCCCCCCCCCCHH-HHHHHHhcCCCCCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHH
Confidence 99997 56544332 333344433222222223344559999999999999999999985
No 211
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=99.97 E-value=1.2e-31 Score=287.10 Aligned_cols=208 Identities=17% Similarity=0.134 Sum_probs=157.8
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..+|.+++||||+++++.++ .. ....+|+|||| .+++|.+++......+++..++.++.||+.||.|||++||
T Consensus 71 ~~~E~~~l~~l~h~~i~~~~~~~~-~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i 148 (327)
T 3lxl_A 71 FQREIQILKALHSDFIVKYRGVSY-GP-GRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRC 148 (327)
T ss_dssp HHHHHHHHHTCCCTTBCCEEEEEE-CS-SSCEEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHhcCCCceeEEEEEEe-cC-CCceEEEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 447888999999999999999433 22 22368999999 7999999996544459999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.+||+|||.+...+.... ..
T Consensus 149 vH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~---------------------------------~~----------- 184 (327)
T 3lxl_A 149 VHRDLAARNILVESEAHVKIADFGLAKLLPLDKD---------------------------------YY----------- 184 (327)
T ss_dssp ECSCCSGGGEEEEETTEEEECCGGGCEECCTTCS---------------------------------EE-----------
T ss_pred cCCCCChhhEEECCCCCEEEcccccceecccCCc---------------------------------cc-----------
Confidence 9999999999999999999999998854322100 00
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
.......||+.|+|||++.+..++.++|||||||++|
T Consensus 185 -------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ 221 (327)
T 3lxl_A 185 -------------------------------------------VVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLY 221 (327)
T ss_dssp -------------------------------------------ECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHH
T ss_pred -------------------------------------------eeeccCCccccccCHHHhccCCCChHHhHHHHHHHHH
Confidence 0001135789999999999888999999999999999
Q ss_pred hccc---cCCCCchH--------------HHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 303 ELFC---PFSTGEEK--------------TRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 303 eLlt---pf~~~~~~--------------~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
+|++ ||...... ......+.....++......+...+|+.+||++||.+|||+.|+++
T Consensus 222 ~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~ 296 (327)
T 3lxl_A 222 ELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGP 296 (327)
T ss_dssp HHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHhCCCCCccccchhhhhcccccccccHHHHHHHhhcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 9999 44322111 1222233333333332233344559999999999999999999975
No 212
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=99.97 E-value=2.1e-31 Score=283.94 Aligned_cols=206 Identities=14% Similarity=0.102 Sum_probs=159.4
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC---------CCCCCHHHHHHHHHHHHH
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---------KRSVDVYECLHIFRQIVE 132 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~---------~~~l~~~~~~~i~~QIl~ 132 (720)
+..+|..++.+++||||+++++ ++.+.. .+++|||| .+++|.+++... ...+++..++.++.||+.
T Consensus 74 ~~~~E~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~ 149 (322)
T 1p4o_A 74 EFLNEASVMKEFNCHHVVRLLG-VVSQGQ---PTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIAD 149 (322)
T ss_dssp HHHHHHHHGGGCCCTTBCCEEE-EECSSS---SCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCEeeeEE-EEccCC---ccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHH
Confidence 3447888999999999999999 554443 56999999 789999999432 134799999999999999
Q ss_pred HHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccccccccc
Q 004998 133 IVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQL 212 (720)
Q Consensus 133 aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgl 212 (720)
||.|||++||+||||||+||+++.++.+||+|||++...... +.
T Consensus 150 ~l~~lH~~~i~H~dikp~NIli~~~~~~kl~Dfg~~~~~~~~----------------------------------~~-- 193 (322)
T 1p4o_A 150 GMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET----------------------------------DY-- 193 (322)
T ss_dssp HHHHHHHTTCBCSCCSGGGEEECTTCCEEECCTTCCCGGGGG----------------------------------GC--
T ss_pred HHHHHHHCCCccCCCccceEEEcCCCeEEECcCccccccccc----------------------------------cc--
Confidence 999999999999999999999999999999999887322100 00
Q ss_pred ccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccc
Q 004998 213 VTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCAS 292 (720)
Q Consensus 213 a~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~s 292 (720)
........||+.|+|||++.+..++.++
T Consensus 194 ----------------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~ 221 (322)
T 1p4o_A 194 ----------------------------------------------------YRKGGKGLLPVRWMSPESLKDGVFTTYS 221 (322)
T ss_dssp ----------------------------------------------------EEGGGSSEECGGGCCHHHHHHCCCCHHH
T ss_pred ----------------------------------------------------cccccCCCCCCCccChhhhccCCCCchh
Confidence 0000113578999999999988899999
Q ss_pred cchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004998 293 DIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 293 DIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~h 361 (720)
|||||||++|||++ ||...... .....+.....++......+...+|+.+||+.||.+|||+.|++++
T Consensus 222 Di~slG~il~el~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~ 293 (322)
T 1p4o_A 222 DVWSFGVVLWEIATLAEQPYQGLSNE-QVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 293 (322)
T ss_dssp HHHHHHHHHHHHHHTSCCTTTTSCHH-HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred hHHHHHHHHHHHHhcCCCccccCCHH-HHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 99999999999998 55554433 3444444443333333333445699999999999999999999974
No 213
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=99.97 E-value=3.2e-31 Score=277.71 Aligned_cols=203 Identities=18% Similarity=0.167 Sum_probs=157.8
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
..+|..++.+++||||+++++ ++.+.. .+|+|||| .|++|.+++.. ....+++..++.++.||+.||.|||++|
T Consensus 56 ~~~E~~~l~~l~h~~i~~~~~-~~~~~~---~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ 131 (288)
T 3kfa_A 56 FLKEAAVMKEIKHPNLVQLLG-VCTREP---PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN 131 (288)
T ss_dssp HHHHHHHHHHCCCTTBCCEEE-EECSSS---SEEEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhCCCCCEeeEEE-EEccCC---CEEEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCC
Confidence 346788999999999999999 554443 57999999 88999999954 3455999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++.++|+|||.+.........
T Consensus 132 i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~-------------------------------------------- 167 (288)
T 3kfa_A 132 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT-------------------------------------------- 167 (288)
T ss_dssp CCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSSE--------------------------------------------
T ss_pred ccCCCCCcceEEEcCCCCEEEccCccceeccCCccc--------------------------------------------
Confidence 999999999999999999999999887443211000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......+|+.|+|||++.+..++.++|||||||++
T Consensus 168 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 202 (288)
T 3kfa_A 168 ---------------------------------------------AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLL 202 (288)
T ss_dssp ---------------------------------------------EETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred ---------------------------------------------cccCCccccCcCChhhhccCCCCchhhHHHHHHHH
Confidence 00013568899999999988899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|+|++ ||...... .....+.....++......+...+|+.+||.+||.+|||+.++++
T Consensus 203 ~~ll~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~ 264 (288)
T 3kfa_A 203 WEIATYGMSPYPGIDLS-QVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 264 (288)
T ss_dssp HHHHTTSCCSSTTCCGG-GHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHhCCCCCCCCCCHH-HHHHHHhccCCCCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHH
Confidence 99998 55443332 233333333222222223344559999999999999999999985
No 214
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=99.97 E-value=3.3e-31 Score=281.40 Aligned_cols=208 Identities=13% Similarity=0.071 Sum_probs=154.7
Q ss_pred eeehhhhcccCCCCCceecccceeecCC-CCCcEEEEEec-CCCCHHHHHh-----CCCCCCCHHHHHHHHHHHHHHHHH
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEA-AIDPFVHAIEW-GDVSLRQWLD-----KPKRSVDVYECLHIFRQIVEIVYA 136 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~-~~~~~~lv~E~-~ggsL~~~L~-----~~~~~l~~~~~~~i~~QIl~aL~y 136 (720)
..+|..++.+++||||+++++.+..... .....+++||| .+++|.+++. .....+++..++.++.||+.||.|
T Consensus 83 ~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~ 162 (313)
T 3brb_A 83 FLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEY 162 (313)
T ss_dssp HHHHHHHHHTCCCTTBCCCCEEEEC-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCCeeeeeEEEeeccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHH
Confidence 4478889999999999999994433222 22357999999 8899999983 233559999999999999999999
Q ss_pred HHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCC
Q 004998 137 AHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 216 (720)
Q Consensus 137 LHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~ 216 (720)
||++||+||||||+||+++.++.+||+|||++.........
T Consensus 163 LH~~~ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~--------------------------------------- 203 (313)
T 3brb_A 163 LSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYY--------------------------------------- 203 (313)
T ss_dssp HHTTTCCCCCCSGGGEEECTTSCEEECSCSCC------------------------------------------------
T ss_pred HHhCCcccCCCCcceEEEcCCCcEEEeecCcceeccccccc---------------------------------------
Confidence 99999999999999999999999999999987432111000
Q ss_pred CCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchh
Q 004998 217 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYR 296 (720)
Q Consensus 217 ~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwS 296 (720)
.......+++.|+|||.+.+..++.++||||
T Consensus 204 -------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s 234 (313)
T 3brb_A 204 -------------------------------------------------RQGRIAKMPVKWIAIESLADRVYTSKSDVWA 234 (313)
T ss_dssp --------------------------------------------------------CCGGGSCHHHHHSSCCCHHHHHHH
T ss_pred -------------------------------------------------CcccccCCCccccCchhhcCCCccchhhhHH
Confidence 0001135688999999999988999999999
Q ss_pred hhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 297 LGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 297 LGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++|+|++ ||...... .....+.....++......+...+|+.+||..||.+|||+.++++
T Consensus 235 lG~il~el~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~ 301 (313)
T 3brb_A 235 FGVTMWEIATRGMTPYPGVQNH-EMYDYLLHGHRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRL 301 (313)
T ss_dssp HHHHHHHHHTTSCCSSTTCCGG-GHHHHHHTTCCCCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHHhcCCCCCccCCHH-HHHHHHHcCCCCCCCccccHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 9999999998 55544333 333334444333333333345569999999999999999999986
No 215
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=99.97 E-value=1e-31 Score=287.90 Aligned_cols=205 Identities=16% Similarity=0.186 Sum_probs=157.4
Q ss_pred eeehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC-------------CCCCCHHHHHHHHH
Q 004998 64 KHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-------------KRSVDVYECLHIFR 128 (720)
Q Consensus 64 ~~~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~-------------~~~l~~~~~~~i~~ 128 (720)
..+|..+|.++ +||||+++++ ++.... .+|+|||| .+++|.+++... ...+++..++.++.
T Consensus 96 ~~~E~~~l~~l~~h~~iv~~~~-~~~~~~---~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (333)
T 2i1m_A 96 LMSELKIMSHLGQHENIVNLLG-ACTHGG---PVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSS 171 (333)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EECSSS---SCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHH
T ss_pred HHHHHHHHHhhcCCCCeeeEEE-EEecCC---ceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHH
Confidence 34788889999 8999999999 555443 57999999 888999999432 33589999999999
Q ss_pred HHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccccc
Q 004998 129 QIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRRE 208 (720)
Q Consensus 129 QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~ 208 (720)
||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 172 qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~--------------------------------- 218 (333)
T 2i1m_A 172 QVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDS--------------------------------- 218 (333)
T ss_dssp HHHHHHHHHHHTTEECSCCSGGGCEEEGGGEEEBCCCGGGCCGGGCT---------------------------------
T ss_pred HHHHHHHHHhcCCcccCCcccceEEECCCCeEEECcccccccccccc---------------------------------
Confidence 99999999999999999999999999999999999998874321110
Q ss_pred ccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCC
Q 004998 209 DLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV 288 (720)
Q Consensus 209 Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 288 (720)
.. .......||+.|+|||++.+..+
T Consensus 219 ~~-------------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~ 243 (333)
T 2i1m_A 219 NY-------------------------------------------------------IVKGNARLPVKWMAPESIFDCVY 243 (333)
T ss_dssp TS-------------------------------------------------------EECSSCEECGGGSCHHHHHHCCC
T ss_pred ce-------------------------------------------------------eecCCCCCCccccCHHHhccCCC
Confidence 00 00011356889999999998889
Q ss_pred Cccccchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 289 SCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 289 s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
+.++|||||||++|||++ ||............+.....++......+...+|+.+||+.||.+|||+.++++
T Consensus 244 ~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~ 319 (333)
T 2i1m_A 244 TVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICS 319 (333)
T ss_dssp CHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence 999999999999999997 666544333333334333322222222344559999999999999999999986
No 216
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=99.97 E-value=1.8e-31 Score=299.18 Aligned_cols=206 Identities=14% Similarity=0.161 Sum_probs=157.5
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
.+|..+|.+++||||+++++ ++..+ .+|+|||| .+++|.++|.. .+..+++.+++.++.||+.||.|||++||
T Consensus 227 ~~E~~~l~~l~hp~iv~~~~-~~~~~----~~~iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i 301 (452)
T 1fmk_A 227 LQEAQVMKKLRHEKLVQLYA-VVSEE----PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY 301 (452)
T ss_dssp HHHHHHHHHCCCTTBCCEEE-EECSS----SCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhCCCCCEeeEEE-EEcCC----ceEEEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 47888999999999999999 55442 47999999 88999999943 23458999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.+||+|||+++........
T Consensus 302 vHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~--------------------------------------------- 336 (452)
T 1fmk_A 302 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYT--------------------------------------------- 336 (452)
T ss_dssp CCSCCSGGGEEECGGGCEEECCCCTTC-----------------------------------------------------
T ss_pred eCCCCChhhEEECCCCCEEECCCccceecCCCcee---------------------------------------------
Confidence 99999999999999999999999887432111000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......+|+.|+|||++.+..++.++|||||||++|
T Consensus 337 --------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~ 372 (452)
T 1fmk_A 337 --------------------------------------------ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLT 372 (452)
T ss_dssp --------------------------------------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred --------------------------------------------cccCCcccccccCHhHHhcCCCCccccHHhHHHHHH
Confidence 000124678899999999888999999999999999
Q ss_pred hccc----cCCCCchHHHHHHHhhcCCCCccccccCch-HHHHHHHcCCCCCCCCCChHHHHc--CcccCC
Q 004998 303 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQ--SEFLNE 366 (720)
Q Consensus 303 eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~-~~~li~~~L~~dP~~Rpta~eiL~--hp~~~~ 366 (720)
||++ ||...... .....+..+..++. +..+|. ..+||.+||+.||.+|||+.++++ ..++..
T Consensus 373 el~t~g~~P~~~~~~~-~~~~~i~~~~~~~~-~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~ 441 (452)
T 1fmk_A 373 ELTTKGRVPYPGMVNR-EVLDQVERGYRMPC-PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 441 (452)
T ss_dssp HHHTTTCCSSTTCCHH-HHHHHHHTTCCCCC-CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSC
T ss_pred HHHhCCCCCCCCCCHH-HHHHHHHcCCCCCC-CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhcc
Confidence 9998 66655443 34444444433332 233444 559999999999999999999986 344443
No 217
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=99.97 E-value=5.9e-31 Score=276.70 Aligned_cols=204 Identities=13% Similarity=0.115 Sum_probs=158.0
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++..++||||+++++ ++..+ .+|+|||| .+++|.+++.... .+++..++.++.||+.||.|||++|
T Consensus 64 ~~~~e~~~l~~l~h~~i~~~~~-~~~~~----~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH~~~ 137 (291)
T 1xbb_A 64 ELLAEANVMQQLDNPYIVRMIG-ICEAE----SWMLVMEMAELGPLNKYLQQNR-HVKDKNIIELVHQVSMGMKYLEESN 137 (291)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEE-EEESS----SEEEEEECCTTEEHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCEEEEEE-EECCC----CcEEEEEeCCCCCHHHHHHhCc-CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3447888999999999999999 55332 57999999 8899999996543 4999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++.+||+|||.+......... .
T Consensus 138 i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~--------------------------------~----------- 174 (291)
T 1xbb_A 138 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY--------------------------------Y----------- 174 (291)
T ss_dssp EECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSE--------------------------------E-----------
T ss_pred eEcCCCCcceEEEeCCCcEEEccCCcceeeccCCCc--------------------------------c-----------
Confidence 999999999999999999999999987443221000 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
. ......+|+.|+|||++.+..++.++|||||||++
T Consensus 175 ------------------------~--------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 210 (291)
T 1xbb_A 175 ------------------------K--------------------AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLM 210 (291)
T ss_dssp ------------------------E--------------------C----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHH
T ss_pred ------------------------c--------------------ccccCCCCceeeChHHhccCCCChhhhHHHHHHHH
Confidence 0 00012467899999999888899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|+|++ ||...... .....+.....++......+...+||.+||+.||.+||++.++++
T Consensus 211 ~~l~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~ 272 (291)
T 1xbb_A 211 WEAFSYGQKPYRGMKGS-EVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVEL 272 (291)
T ss_dssp HHHHTTTCCSSTTCCHH-HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred HHHHhcCCCCCCCCCHH-HHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 99997 66554433 344444444333322223344559999999999999999999985
No 218
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=99.97 E-value=2.3e-31 Score=284.00 Aligned_cols=207 Identities=17% Similarity=0.117 Sum_probs=156.3
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++||||+++++ ++.+.. ...+++|||| .+++|.+++.... +++.+++.++.||+.||.|||++|
T Consensus 79 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~i~~~l~~~l~~LH~~~ 154 (318)
T 3lxp_A 79 GWKQEIDILRTLYHEHIIKYKG-CCEDAG-AASLQLVMEYVPLGSLRDYLPRHS--IGLAQLLLFAQQICEGMAYLHAQH 154 (318)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EEEETT-TTEEEEEECCCTTCBHHHHGGGSC--CCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCcchhhEEE-EEecCC-CceEEEEEecccCCcHHHHHhhCC--CCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3447888999999999999999 554432 2368999999 7899999996543 999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||.+......... +
T Consensus 155 ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~--------------------------------~----------- 191 (318)
T 3lxp_A 155 YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEY--------------------------------Y----------- 191 (318)
T ss_dssp EECSCCSGGGEEECTTCCEEECCGGGCEECCTTCSE--------------------------------E-----------
T ss_pred ccCCCCchheEEEcCCCCEEECCccccccccccccc--------------------------------c-----------
Confidence 999999999999999999999999887443211000 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
.......||+.|+|||++.+..++.++|||||||++
T Consensus 192 --------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 227 (318)
T 3lxp_A 192 --------------------------------------------RVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTL 227 (318)
T ss_dssp --------------------------------------------EC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHH
T ss_pred --------------------------------------------ccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHH
Confidence 000113578899999999988899999999999999
Q ss_pred hhccc---cCCCCchH--------------HHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 302 FELFC---PFSTGEEK--------------TRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt---pf~~~~~~--------------~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||...... ......+.....++......+...+||.+||+.||.+|||+.|+++
T Consensus 228 ~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~ 303 (318)
T 3lxp_A 228 YELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIP 303 (318)
T ss_dssp HHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhcccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 99999 44332111 1112222223333322223344569999999999999999999985
No 219
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=99.97 E-value=2.4e-31 Score=278.84 Aligned_cols=205 Identities=16% Similarity=0.095 Sum_probs=157.5
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++.+++||||+++++ ++... .++++||| .+++|.+++......+++..++.++.||+.||.|||++|
T Consensus 67 ~~~~e~~~l~~l~h~~i~~~~~-~~~~~----~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ 141 (291)
T 1u46_A 67 DFIREVNAMHSLDHRNLIRLYG-VVLTP----PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR 141 (291)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EECSS----SCEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCcccEEE-EEccC----CceeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3447888999999999999999 55443 26899999 889999999655455999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++.+||+|||.+......... .
T Consensus 142 i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~--------------------------------~----------- 178 (291)
T 1u46_A 142 FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH--------------------------------Y----------- 178 (291)
T ss_dssp EECSCCCGGGEEEEETTEEEECCCTTCEECCC-CCE--------------------------------E-----------
T ss_pred cccCCCchheEEEcCCCCEEEccccccccccccccc--------------------------------h-----------
Confidence 999999999999999999999999987443211000 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
.......+|+.|+|||++.+..++.++|||||||++
T Consensus 179 --------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 214 (291)
T 1u46_A 179 --------------------------------------------VMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTL 214 (291)
T ss_dssp --------------------------------------------EC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHH
T ss_pred --------------------------------------------hhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHH
Confidence 000013568899999999888899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|+|++ ||...... .....+............++ ...+|+.+||+.||.+|||+.++++
T Consensus 215 ~~l~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~ 277 (291)
T 1u46_A 215 WEMFTYGQEPWIGLNGS-QILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRD 277 (291)
T ss_dssp HHHHTTSCCTTTTCCHH-HHHHHHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHhCCCCCcccCCHH-HHHHHHHccCCCCCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 99997 56555443 33333433322222233344 4559999999999999999999986
No 220
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=99.97 E-value=1.6e-31 Score=286.06 Aligned_cols=210 Identities=14% Similarity=0.141 Sum_probs=159.0
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC------CCCCHHHHHHHHHHHHHHHH
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK------RSVDVYECLHIFRQIVEIVY 135 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~------~~l~~~~~~~i~~QIl~aL~ 135 (720)
+..+|..++.+++||||+++++ ++.... .+|+|||| .|++|.+++.... ..+++.+++.++.||+.||.
T Consensus 79 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~ 154 (327)
T 2yfx_A 79 DFLMEALIISKFNHQNIVRCIG-VSLQSL---PRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 154 (327)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EECSSS---SCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhCCCCCCCeEEE-EEcCCC---CcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHH
Confidence 4447888999999999999999 554443 46999999 7999999995432 34899999999999999999
Q ss_pred HHHHcCceeccCCCCcEEEcc---CCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccccccccc
Q 004998 136 AAHSQGIVVHNVRPSCFVMSS---FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQL 212 (720)
Q Consensus 136 yLHs~gIvHrDLKP~NILl~~---~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgl 212 (720)
|||++||+||||||+|||++. ...++|+|||.+........ .
T Consensus 155 ~LH~~~i~H~dlkp~NIli~~~~~~~~~kl~Dfg~~~~~~~~~~---------------------------------~-- 199 (327)
T 2yfx_A 155 YLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASY---------------------------------Y-- 199 (327)
T ss_dssp HHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHC---------------------------------------
T ss_pred HHhhCCeecCcCCHhHEEEecCCCcceEEECccccccccccccc---------------------------------c--
Confidence 999999999999999999984 44699988887732110000 0
Q ss_pred ccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccc
Q 004998 213 VTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCAS 292 (720)
Q Consensus 213 a~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~s 292 (720)
.......||+.|+|||++.+..++.++
T Consensus 200 -----------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~ 226 (327)
T 2yfx_A 200 -----------------------------------------------------RKGGCAMLPVKWMPPEAFMEGIFTSKT 226 (327)
T ss_dssp -------------------------------------------------------CCGGGSCGGGCCHHHHHHCCCCHHH
T ss_pred -----------------------------------------------------ccCCCcCCCcceeCHhHhcCCCCCchh
Confidence 000114678999999999888899999
Q ss_pred cchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccC
Q 004998 293 DIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLN 365 (720)
Q Consensus 293 DIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~ 365 (720)
|||||||++|+|++ ||...... .....+.....++......+...+||.+||+.||.+||++.+++++.++.
T Consensus 227 Di~slG~il~ellt~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~ 302 (327)
T 2yfx_A 227 DTWSFGVLLWEIFSLGYMPYPSKSNQ-EVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC 302 (327)
T ss_dssp HHHHHHHHHHHHHTTSCCSSTTCCHH-HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHcCCCCCCCCcCHH-HHHHHHhcCCCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence 99999999999997 55544333 33444444333322222334455999999999999999999999976643
No 221
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.97 E-value=9.3e-31 Score=304.10 Aligned_cols=204 Identities=14% Similarity=0.113 Sum_probs=158.9
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..+|.+++|||||++++ ++..+ .+|+|||| .+++|.++|......+++..++.|+.||+.||.|||++||
T Consensus 383 ~~~E~~il~~l~hpniv~l~~-~~~~~----~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~i 457 (613)
T 2ozo_A 383 MMREAQIMHQLDNPYIVRLIG-VCQAE----ALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNF 457 (613)
T ss_dssp HHHHHHHHTTCCCTTBCCEEE-EEESS----SEEEEEECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhCCCCCEeeEEE-EeccC----CeEEEEEeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence 347888999999999999999 55543 48999999 8999999996666679999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
|||||||+|||++.++.+||+|||+++..+..... +
T Consensus 458 iHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~--------------------------------~------------ 493 (613)
T 2ozo_A 458 VHRNLAARNVLLVNRHYAKISDFGLSKALGADDSY--------------------------------Y------------ 493 (613)
T ss_dssp CCSCCSGGGEEEEETTEEEECCCSTTTTCC--------------------------------------------------
T ss_pred EcCcCCHHHEEEcCCCcEEEeeccCcccccCCCce--------------------------------e------------
Confidence 99999999999999999999999988543221000 0
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
.......+|+.|+|||++.+..++.++|||||||+||
T Consensus 494 -------------------------------------------~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ 530 (613)
T 2ozo_A 494 -------------------------------------------TARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMW 530 (613)
T ss_dssp ---------------------------------------------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred -------------------------------------------eeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHH
Confidence 0000124578999999999888999999999999999
Q ss_pred hccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 303 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 303 eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
||++ ||...... ..+..+..+..++......+...+||.+||+.||.+||++.+|++
T Consensus 531 ellt~G~~Pf~~~~~~-~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~ 591 (613)
T 2ozo_A 531 EALSYGQKPYKKMKGP-EVMAFIEQGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQ 591 (613)
T ss_dssp HHHTTSCCTTTTCCSH-HHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHH
T ss_pred HHHHCCCCCCCCCCHH-HHHHHHHcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 9997 67665443 344445444333322223344559999999999999999999874
No 222
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=99.97 E-value=6.8e-31 Score=281.41 Aligned_cols=208 Identities=13% Similarity=0.146 Sum_probs=150.4
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHc---
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ--- 140 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~--- 140 (720)
+.+...+..++||||+++++.+.........+|+|||| .+++|.+++... .+++..++.++.||+.||.|||++
T Consensus 79 e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~ 156 (337)
T 3mdy_A 79 ETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKST--TLDAKSMLKLAYSSVSGLCHLHTEIFS 156 (337)
T ss_dssp HHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHSCBCS
T ss_pred HHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEEEEeccCCCcHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 34444555569999999999444443333578999999 789999999654 399999999999999999999998
Q ss_pred -----CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccC
Q 004998 141 -----GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTA 215 (720)
Q Consensus 141 -----gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~ 215 (720)
||+||||||+|||++.++.+||+|||++.........
T Consensus 157 ~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~-------------------------------------- 198 (337)
T 3mdy_A 157 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNE-------------------------------------- 198 (337)
T ss_dssp TTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEECC-------------------------------------------
T ss_pred hccCCCEEecccchHHEEECCCCCEEEEeCCCceeecccccc--------------------------------------
Confidence 9999999999999999999999999988443221000
Q ss_pred CCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCcc----
Q 004998 216 PTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCA---- 291 (720)
Q Consensus 216 ~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~---- 291 (720)
.........||+.|+|||++.+..++..
T Consensus 199 ------------------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~ 230 (337)
T 3mdy_A 199 ------------------------------------------------VDIPPNTRVGTKRYMPPEVLDESLNRNHFQSY 230 (337)
T ss_dssp ----------------------------------------------------CCSSCSCGGGCCHHHHTTCCCTTCTHHH
T ss_pred ------------------------------------------------ccCCCCCCccCcceeChhhcccccCCccccCc
Confidence 0000011478999999999988776555
Q ss_pred --ccchhhhhhhhhcccc-------------CCCC----chHHHHHHHhhcCCCCccccc-----cC-chHHHHHHHcCC
Q 004998 292 --SDIYRLGVLLFELFCP-------------FSTG----EEKTRTMSSLRHRVLPPQLLL-----KF-PKEASFCLWLLH 346 (720)
Q Consensus 292 --sDIwSLGvll~eLltp-------------f~~~----~~~~~~~~~l~~~~~p~~~~~-----~~-p~~~~li~~~L~ 346 (720)
+|||||||++|||+++ |... .........+......+.+.. .. +...+|+.+||+
T Consensus 231 ~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~ 310 (337)
T 3mdy_A 231 IMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWA 310 (337)
T ss_dssp HHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSC
T ss_pred cccchHHHHHHHHHHHhccCcccccccccccHhhhcCCCCchhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhh
Confidence 9999999999999973 2211 111222222222222222222 12 234599999999
Q ss_pred CCCCCCCChHHHHc
Q 004998 347 PEPSGRPKMGELLQ 360 (720)
Q Consensus 347 ~dP~~Rpta~eiL~ 360 (720)
.||.+|||+.++++
T Consensus 311 ~dP~~Rps~~ell~ 324 (337)
T 3mdy_A 311 HNPASRLTALRVKK 324 (337)
T ss_dssp SSGGGSCCHHHHHH
T ss_pred hChhhCCCHHHHHH
Confidence 99999999999986
No 223
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=99.97 E-value=6.2e-31 Score=278.92 Aligned_cols=204 Identities=17% Similarity=0.233 Sum_probs=153.5
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC---CCCCCCHHHHHHHHHHHHHHHHHHH
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~---~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
+..+|..++.+++||||+++++ ++.... .++++||| .+++|.+++.. ....+++..++.++.||+.||.|||
T Consensus 78 ~~~~E~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH 153 (310)
T 2wqm_A 78 DCIKEIDLLKQLNHPNVIKYYA-SFIEDN---ELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH 153 (310)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEE-EEEETT---EEEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCEeeEEE-EEEcCC---cEEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHh
Confidence 3347888999999999999999 444433 67999999 88899999943 3455999999999999999999999
Q ss_pred HcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCC
Q 004998 139 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
++||+||||||+||+++.++.++|+|||++........
T Consensus 154 ~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~~~------------------------------------------ 191 (310)
T 2wqm_A 154 SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT------------------------------------------ 191 (310)
T ss_dssp HTTCCCCCCCGGGEEECTTSCEEECCC-----------------------------------------------------
T ss_pred hCCeeCCCCcHHHEEEcCCCCEEEEeccceeeecCCCc------------------------------------------
Confidence 99999999999999999999999999988743211100
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhh
Q 004998 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
......||+.|+|||++.+..++.++||||||
T Consensus 192 ------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG 223 (310)
T 2wqm_A 192 ------------------------------------------------AAHSLVGTPYYMSPERIHENGYNFKSDIWSLG 223 (310)
T ss_dssp -------------------------------------------------------CCSSCCHHHHTTCCCCHHHHHHHHH
T ss_pred ------------------------------------------------cccccCCCeeEeChHHhCCCCCCchhhHHHHH
Confidence 00013679999999999998899999999999
Q ss_pred hhhhhccc---cCCCCc-hHHHHHHHhhcCCCCccccccCch-HHHHHHHcCCCCCCCCCChHHHHc
Q 004998 299 VLLFELFC---PFSTGE-EKTRTMSSLRHRVLPPQLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 299 vll~eLlt---pf~~~~-~~~~~~~~l~~~~~p~~~~~~~p~-~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|++|+|++ ||.... ........+....+++.....++. ..+|+.+||+.||.+|||+.++++
T Consensus 224 ~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~ 290 (310)
T 2wqm_A 224 CLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYD 290 (310)
T ss_dssp HHHHHHHHSSCTTC---CCHHHHHHHHHTTCSCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHhCCCCCcccchhHHHHHHHhhcccCCCCcccccCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 99999999 665432 222334444444455444344444 459999999999999999999986
No 224
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=99.97 E-value=6e-31 Score=279.32 Aligned_cols=206 Identities=18% Similarity=0.271 Sum_probs=153.5
Q ss_pred eeeehhhhcccC----CCCCceecccceeecCCCCCcEEEEEec--CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHH
Q 004998 63 RKHSDGVELTHG----DHLRNQGGLSGVCENEAAIDPFVHAIEW--GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYA 136 (720)
Q Consensus 63 r~~~e~~~Ls~l----~HpnIV~l~~~~~~~~~~~~~~~lv~E~--~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~y 136 (720)
+..+|..++.++ +||||+++++ ++.... .++++||+ .+++|.+++.... .+++..++.++.||+.||.|
T Consensus 80 ~~~~e~~~l~~l~~~~~h~~i~~~~~-~~~~~~---~~~~v~e~~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~ 154 (312)
T 2iwi_A 80 TCPLEVALLWKVGAGGGHPGVIRLLD-WFETQE---GFMLVLERPLPAQDLFDYITEKG-PLGEGPSRCFFGQVVAAIQH 154 (312)
T ss_dssp CCCHHHHHHHHHHSSCCCSSBCCEEE-EC--------CEEEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcccCCCCCeeeEEE-EEecCC---eEEEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHH
Confidence 444677777777 8999999999 554443 46899997 6899999995543 49999999999999999999
Q ss_pred HHHcCceeccCCCCcEEEc-cCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccC
Q 004998 137 AHSQGIVVHNVRPSCFVMS-SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTA 215 (720)
Q Consensus 137 LHs~gIvHrDLKP~NILl~-~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~ 215 (720)
||++||+||||||+||+++ .++.+||+|||.+.......
T Consensus 155 lH~~~i~H~dlkp~Nil~~~~~~~~kl~dfg~~~~~~~~~---------------------------------------- 194 (312)
T 2iwi_A 155 CHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEP---------------------------------------- 194 (312)
T ss_dssp HHHHTEECCCCSGGGEEEETTTTEEEECCCSSCEECCSSC----------------------------------------
T ss_pred HHHCCeeecCCChhhEEEeCCCCeEEEEEcchhhhcccCc----------------------------------------
Confidence 9999999999999999999 88999999988874321110
Q ss_pred CCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCC-Cccccc
Q 004998 216 PTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDI 294 (720)
Q Consensus 216 ~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~-s~~sDI 294 (720)
.....||+.|+|||++.+..+ +.++||
T Consensus 195 ----------------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~Di 222 (312)
T 2iwi_A 195 ----------------------------------------------------YTDFDGTRVYSPPEWISRHQYHALPATV 222 (312)
T ss_dssp ----------------------------------------------------BCCCCSCTTTSCHHHHHHSCBCHHHHHH
T ss_pred ----------------------------------------------------ccccCCcccccCceeeecCCCCCccchH
Confidence 001357999999999987665 569999
Q ss_pred hhhhhhhhhccccCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCccc
Q 004998 295 YRLGVLLFELFCPFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 295 wSLGvll~eLltpf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
|||||++|||+++..++......... ...++. ...+...+||.+||+.||.+|||+.|+++||||+.....
T Consensus 223 ~slG~il~~l~~g~~pf~~~~~~~~~--~~~~~~---~~~~~~~~li~~~l~~~p~~Rps~~e~l~~~~~~~~~~~ 293 (312)
T 2iwi_A 223 WSLGILLYDMVCGDIPFERDQEILEA--ELHFPA---HVSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQTPAED 293 (312)
T ss_dssp HHHHHHHHHHHHSSCSCCSHHHHHHT--CCCCCT---TSCHHHHHHHHHHTCSSTTTSCCHHHHHHSTTTCC----
T ss_pred HHHHHHHHHHHHCCCCCCChHHHhhh--ccCCcc---cCCHHHHHHHHHHccCChhhCcCHHHHhcChhhcCchhc
Confidence 99999999999943333222221111 111221 123445699999999999999999999999999987543
No 225
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=99.97 E-value=9.1e-31 Score=274.95 Aligned_cols=211 Identities=17% Similarity=0.146 Sum_probs=157.1
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..+|..++..+.|++++..+..++.... ..+++|||.+++|.+++......+++.+++.++.||+.||.|||++||+
T Consensus 51 ~~~e~~~l~~l~~~~~i~~~~~~~~~~~---~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~iv 127 (296)
T 4hgt_A 51 LHIESKIYKMMQGGVGIPTIRWCGAEGD---YNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFI 127 (296)
T ss_dssp HHHHHHHHHHHTTSTTCCCEEEEEEETT---EEEEEEECCCCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHHHhcCCCCCCeeeeecCCCC---ceEEEEEccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 3467778999999999988884444433 6799999999999999975556699999999999999999999999999
Q ss_pred eccCCCCcEEE---ccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004998 144 VHNVRPSCFVM---SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 144 HrDLKP~NILl---~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||||||+|||+ +.++.+||+|||.+........... .
T Consensus 128 H~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~------------------------------~---------- 167 (296)
T 4hgt_A 128 HRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQH------------------------------I---------- 167 (296)
T ss_dssp CSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCB------------------------------C----------
T ss_pred cCCCCHHHeeeeccCCCCeEEEecCccceeccCcccCcc------------------------------C----------
Confidence 99999999999 7889999999998854322210000 0
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhh
Q 004998 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
. ........||+.|+|||++.+..++.++|||||||+
T Consensus 168 ------------------------------------------~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~i 204 (296)
T 4hgt_A 168 ------------------------------------------P-YRENKNLTGTARYASINTHLGIEQSRRDDLESLGYV 204 (296)
T ss_dssp ------------------------------------------C-CCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHH
T ss_pred ------------------------------------------C-CCcccccCCCccccchHHhcCCCCCchhHHHHHHHH
Confidence 0 000012478999999999999999999999999999
Q ss_pred hhhccc---cCCCCchH--HHHHHHhhc---CCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 301 LFELFC---PFSTGEEK--TRTMSSLRH---RVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 301 l~eLlt---pf~~~~~~--~~~~~~l~~---~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
+|||++ ||...... ...+..+.. ....+.....+| ...+|+.+||+.||.+|||+.++++
T Consensus 205 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~ 273 (296)
T 4hgt_A 205 LMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQ 273 (296)
T ss_dssp HHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHH
T ss_pred HHHHhcCCCCCcccchhhhhhhhhhhhcccccchhhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHH
Confidence 999999 67543211 011111111 111112223334 4459999999999999999999986
No 226
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=99.97 E-value=5.7e-31 Score=298.47 Aligned_cols=201 Identities=19% Similarity=0.205 Sum_probs=157.7
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
.+|..+|.+++|||||++++ ++.... .+|+|||| .+++|.++|.. ....+++..++.|+.||+.||.|||++||
T Consensus 264 ~~E~~~l~~l~hpniv~l~~-~~~~~~---~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~i 339 (495)
T 1opk_A 264 LKEAAVMKEIKHPNLVQLLG-VCTREP---PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF 339 (495)
T ss_dssp HHHHHHHHHCCCTTBCCEEE-EECSSS---SCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHhcCCCCEeeEEE-EEecCC---cEEEEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 37888999999999999999 555443 57999999 88999999954 34458999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.+||+|||+++........
T Consensus 340 vHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~--------------------------------------------- 374 (495)
T 1opk_A 340 IHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYT--------------------------------------------- 374 (495)
T ss_dssp ECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEE---------------------------------------------
T ss_pred ccCCCChhhEEECCCCcEEEeecccceeccCCcee---------------------------------------------
Confidence 99999999999999999999999887443111000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......+++.|+|||++.+..++.++|||||||+||
T Consensus 375 --------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~ 410 (495)
T 1opk_A 375 --------------------------------------------AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLW 410 (495)
T ss_dssp --------------------------------------------CCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHH
T ss_pred --------------------------------------------ecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHH
Confidence 000124578899999999888999999999999999
Q ss_pred hccc----cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 303 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 303 eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
||++ ||...... .....+......+. +..+| ...+||.+||+.||.+|||+.+|++
T Consensus 411 el~t~g~~p~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~l~~li~~cl~~dP~~RPs~~el~~ 471 (495)
T 1opk_A 411 EIATYGMSPYPGIDLS-QVYELLEKDYRMER-PEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 471 (495)
T ss_dssp HHHTTSCCSSTTCCGG-GHHHHHHTTCCCCC-CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHhCCCCCCCCCCHH-HHHHHHHcCCCCCC-CCCCCHHHHHHHHHHcCcChhHCcCHHHHHH
Confidence 9998 66554432 33334443332222 23344 4559999999999999999999986
No 227
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=99.97 E-value=3.6e-31 Score=296.87 Aligned_cols=202 Identities=13% Similarity=0.135 Sum_probs=157.6
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
..+|..+|.+++|||||++++ ++... .+|+|||| .+++|.++|... ...+++..++.++.||+.||.|||++|
T Consensus 230 ~~~E~~~l~~l~h~~iv~l~~-~~~~~----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ 304 (454)
T 1qcf_A 230 FLAEANVMKTLQHDKLVKLHA-VVTKE----PIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN 304 (454)
T ss_dssp HHHHHHHHTTCCCTTBCCEEE-EECSS----SCEEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhhCCCCCEeeEEE-EEeCC----ccEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 347888999999999999999 55422 47999999 899999999543 235899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||+++...... +
T Consensus 305 ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~----------------------------------~----------- 339 (454)
T 1qcf_A 305 YIHRDLRAANILVSASLVCKIADFGLARVIEDNE----------------------------------Y----------- 339 (454)
T ss_dssp CCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHH----------------------------------H-----------
T ss_pred ccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCc----------------------------------e-----------
Confidence 9999999999999999999999998874321100 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
. ......+|+.|+|||++.+..++.++|||||||+|
T Consensus 340 -------------------------~-------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l 375 (454)
T 1qcf_A 340 -------------------------T-------------------AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILL 375 (454)
T ss_dssp -------------------------H-------------------TTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred -------------------------e-------------------ccCCCcccccccCHHHhccCCCCcHHHHHhHHHHH
Confidence 0 00002457889999999988899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||...... .....+..+..++......+...+||.+||+.||.+|||+.+|+.
T Consensus 376 ~el~t~g~~P~~~~~~~-~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~ 437 (454)
T 1qcf_A 376 MEIVTYGRIPYPGMSNP-EVIRALERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQS 437 (454)
T ss_dssp HHHHTTSCCSSTTCCHH-HHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHhCCCCCCCCCCHH-HHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHH
Confidence 99998 67655443 344444444333332233344559999999999999999999975
No 228
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=99.97 E-value=2.9e-31 Score=284.54 Aligned_cols=215 Identities=12% Similarity=0.107 Sum_probs=152.1
Q ss_pred eeeeehhhhcccCCCCCceecccceee-cCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004998 62 LRKHSDGVELTHGDHLRNQGGLSGVCE-NEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 62 ~r~~~e~~~Ls~l~HpnIV~l~~~~~~-~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
+..+.+...+..++||||+++++.+.. .......+|+|||| .+++|.+++.... .++..++.++.||+.||.|||+
T Consensus 52 ~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~i~~qi~~~L~~LH~ 129 (336)
T 3g2f_A 52 FINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHT--SDWVSSCRLAHSVTRGLAYLHT 129 (336)
T ss_dssp HHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEEEECCCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhccCcchhhheecccccccCCCceEEEEEecCCCCcHHHHHhhcc--cchhHHHHHHHHHHHHHHHHHh
Confidence 344466666777999999999973322 22223357999999 7999999996544 5899999999999999999999
Q ss_pred c---------CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccccccc
Q 004998 140 Q---------GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDL 210 (720)
Q Consensus 140 ~---------gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Df 210 (720)
+ ||+||||||+|||++.++.+||+|||++........... ..
T Consensus 130 ~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG~a~~~~~~~~~~~----------------------------~~- 180 (336)
T 3g2f_A 130 ELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRP----------------------------GE- 180 (336)
T ss_dssp CBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCTTCEECSSSSCC---------------------------------
T ss_pred hhccccccccceeecccccceEEEcCCCcEEEeeccceeecccccccCc----------------------------cc-
Confidence 9 999999999999999999999999998854322110000 00
Q ss_pred ccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-----
Q 004998 211 QLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG----- 285 (720)
Q Consensus 211 gla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~----- 285 (720)
.........||+.|+|||++.+
T Consensus 181 -----------------------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~ 207 (336)
T 3g2f_A 181 -----------------------------------------------------EDNAAISEVGTIRYMAPEVLEGAVNLR 207 (336)
T ss_dssp ----------------------------------------------------------CCTTSCGGGCCHHHHTTCCCGG
T ss_pred -----------------------------------------------------cccccccCCCccceeCchhhcCCcccc
Confidence 0000112478999999999987
Q ss_pred --CCCCccccchhhhhhhhhccc---cCCCCch-----------------HHHHHHHhhcCCCCccccccCc-------h
Q 004998 286 --APVSCASDIYRLGVLLFELFC---PFSTGEE-----------------KTRTMSSLRHRVLPPQLLLKFP-------K 336 (720)
Q Consensus 286 --~~~s~~sDIwSLGvll~eLlt---pf~~~~~-----------------~~~~~~~l~~~~~p~~~~~~~p-------~ 336 (720)
..++.++|||||||++|||++ ||.+... .......+......+.++..++ .
T Consensus 208 ~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (336)
T 3g2f_A 208 DXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRS 287 (336)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHH
T ss_pred cccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHH
Confidence 346789999999999999997 4332110 1111122222222333333222 3
Q ss_pred HHHHHHHcCCCCCCCCCChHHHHc
Q 004998 337 EASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 337 ~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
..+||.+||+.||++|||+.|+++
T Consensus 288 l~~li~~cl~~dP~~Rps~~e~l~ 311 (336)
T 3g2f_A 288 LKETIEDCWDQDAEARLTAQXAEE 311 (336)
T ss_dssp HHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHhcCChhhCcchHHHHH
Confidence 569999999999999999999965
No 229
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=99.97 E-value=7.5e-31 Score=281.78 Aligned_cols=205 Identities=16% Similarity=0.173 Sum_probs=158.7
Q ss_pred eeeehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC---------------CCCCHHHHHH
Q 004998 63 RKHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---------------RSVDVYECLH 125 (720)
Q Consensus 63 r~~~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~---------------~~l~~~~~~~ 125 (720)
+..+|..++.++ +||||+++++ ++.... .+|+|||| .+++|.+++.... ..+++.+++.
T Consensus 86 ~~~~E~~~l~~l~~hp~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (334)
T 2pvf_A 86 DLVSEMEMMKMIGKHKNIINLLG-ACTQDG---PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161 (334)
T ss_dssp HHHHHHHHHHHHCCCTTBCCEEE-EECSSS---CCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHH
T ss_pred HHHHHHHHHHHhhcCCCEeeEEE-EEccCC---ceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHH
Confidence 344777888888 8999999999 554443 57999999 8899999995433 2489999999
Q ss_pred HHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcc
Q 004998 126 IFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRL 205 (720)
Q Consensus 126 i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 205 (720)
++.||+.||.|||++||+||||||+|||++.++.+||+|||++...+....
T Consensus 162 i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~----------------------------- 212 (334)
T 2pvf_A 162 CTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDY----------------------------- 212 (334)
T ss_dssp HHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECTTTSS-----------------------------
T ss_pred HHHHHHHHHHHHHhCCeeCCCCccceEEEcCCCCEEEcccccccccccccc-----------------------------
Confidence 999999999999999999999999999999999999999998743321100
Q ss_pred cccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC
Q 004998 206 RREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG 285 (720)
Q Consensus 206 ~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 285 (720)
+ .......+|+.|+|||++.+
T Consensus 213 ----~-------------------------------------------------------~~~~~~~~~~~y~aPE~~~~ 233 (334)
T 2pvf_A 213 ----Y-------------------------------------------------------KKTTNGRLPVKWMAPEALFD 233 (334)
T ss_dssp ----E-------------------------------------------------------ECCSCCCCCGGGCCHHHHHH
T ss_pred ----c-------------------------------------------------------cccCCCCcccceeChHHhcC
Confidence 0 00001356889999999988
Q ss_pred CCCCccccchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 286 APVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 286 ~~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
..++.++|||||||++|||++ ||...... .....+.....++......+...+|+.+||+.||.+|||+.|+++
T Consensus 234 ~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 311 (334)
T 2pvf_A 234 RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE-ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311 (334)
T ss_dssp CEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHH-HHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHH-HHHHHHhcCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 889999999999999999997 56554332 344444444333333333345569999999999999999999986
No 230
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=99.97 E-value=3.7e-31 Score=308.42 Aligned_cols=203 Identities=13% Similarity=0.110 Sum_probs=157.2
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..+|.+++|||||++++ +++.+ .+++|||| .+++|.++|... ..+++..++.|+.||+.||.|||++||
T Consensus 417 ~~~E~~il~~l~hpnIv~l~~-~~~~~----~~~lv~E~~~~g~L~~~l~~~-~~l~~~~~~~i~~qi~~~L~yLH~~~i 490 (635)
T 4fl3_A 417 LLAEANVMQQLDNPYIVRMIG-ICEAE----SWMLVMEMAELGPLNKYLQQN-RHVKDKNIIELVHQVSMGMKYLEESNF 490 (635)
T ss_dssp HHHHHHHHHHCCCTTBCCEEE-EEESS----SEEEEEECCTTEEHHHHHHHC-TTCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhCCCCCEeeEEE-EEecC----CEEEEEEccCCCCHHHHHhhC-CCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence 337888999999999999999 66543 47899999 899999999554 349999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
|||||||+||||+.++.+||+|||+++....... +
T Consensus 491 iHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~---------------------------------~------------ 525 (635)
T 4fl3_A 491 VHRDLAARNVLLVTQHYAKISDFGLSKALRADEN---------------------------------Y------------ 525 (635)
T ss_dssp CCSCCSGGGEEEEETTEEEECCTTHHHHTTC-------------------------------------------------
T ss_pred eCCCCChHhEEEeCCCCEEEEEcCCccccccCcc---------------------------------c------------
Confidence 9999999999999999999999998854321100 0
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
........||+.|+|||++.+..++.++|||||||++|
T Consensus 526 ------------------------------------------~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ 563 (635)
T 4fl3_A 526 ------------------------------------------YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMW 563 (635)
T ss_dssp ---------------------------------------------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred ------------------------------------------cccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHH
Confidence 00001134688999999999888999999999999999
Q ss_pred hccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 303 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 303 eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
||++ ||...... .....+..+..++......+...+||.+||+.||.+||++.+|++
T Consensus 564 ellt~G~~Pf~~~~~~-~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~ 624 (635)
T 4fl3_A 564 EAFSYGQKPYRGMKGS-EVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVEL 624 (635)
T ss_dssp HHHTTTCCSSTTCCHH-HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred HHHhCCCCCCCCCCHH-HHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence 9997 67665443 344444444433332223334459999999999999999999975
No 231
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.97 E-value=3.5e-32 Score=286.75 Aligned_cols=207 Identities=12% Similarity=0.119 Sum_probs=137.7
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH------
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAH------ 138 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLH------ 138 (720)
.+......++||||+++++.+.........+++|||| .+++|.+++.+. .+++..++.++.||+.||.|||
T Consensus 46 ~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~i~~~l~~lH~~~~~~ 123 (303)
T 3gxj_A 46 AEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGT 123 (303)
T ss_dssp HHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEEEEECCTTCCHHHHHHHC--CBCC-CHHHHC-CHHHHHC-CCCCBCST
T ss_pred HHHHHHHhccCcceeeeeeecccCCCccceeEEEEeccCCCCHHHHHhcc--CcchHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 3433333489999999999544444443468999999 888999999554 3888999999999999999999
Q ss_pred --HcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCC
Q 004998 139 --SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 216 (720)
Q Consensus 139 --s~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~ 216 (720)
++||+||||||+|||++.++.+||+|||++......... .
T Consensus 124 ~~~~~ivH~Dlkp~Nil~~~~~~~kl~DFg~a~~~~~~~~~--------------------------------~------ 165 (303)
T 3gxj_A 124 QGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDT--------------------------------I------ 165 (303)
T ss_dssp TCBC-CCCSCCCGGGC-CCTTCCC-BCCCCC-CCEETTTTE--------------------------------E------
T ss_pred ccCCCEeeCcCCHHHeEECCCCCEEEeecCcceeccCCCcc--------------------------------c------
Confidence 999999999999999999999999999887432111000 0
Q ss_pred CCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC------CCCc
Q 004998 217 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA------PVSC 290 (720)
Q Consensus 217 ~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~------~~s~ 290 (720)
........||+.|+|||++.+. .++.
T Consensus 166 ------------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~ 197 (303)
T 3gxj_A 166 ------------------------------------------------DIAPNHRVGTKRYMAPEVLDDSINMKHFESFK 197 (303)
T ss_dssp ------------------------------------------------SCC-----CCGGGCCHHHHTTCSCTTCHHHHH
T ss_pred ------------------------------------------------ccccCCCCcCccccCHhhhcCcccccccccCc
Confidence 0000114689999999999876 3457
Q ss_pred cccchhhhhhhhhcccc-------------CCCCc----hHHHHHHHhhcCCCCccccccC------chHHHHHHHcCCC
Q 004998 291 ASDIYRLGVLLFELFCP-------------FSTGE----EKTRTMSSLRHRVLPPQLLLKF------PKEASFCLWLLHP 347 (720)
Q Consensus 291 ~sDIwSLGvll~eLltp-------------f~~~~----~~~~~~~~l~~~~~p~~~~~~~------p~~~~li~~~L~~ 347 (720)
++|||||||++|||+++ |.... ........+......+.+...+ +...+|+.+||+.
T Consensus 198 ~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 277 (303)
T 3gxj_A 198 RADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYA 277 (303)
T ss_dssp HHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTCC-CCCCC-CHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCS
T ss_pred chhHHHHHHHHHHHHhcCCCccccceeeccccccCCCCccHHHHHHHHHHhhcCCCccccccchhhHHHHHHHHHHHhcc
Confidence 89999999999999973 22110 1112222233333333332222 1345999999999
Q ss_pred CCCCCCChHHHHc
Q 004998 348 EPSGRPKMGELLQ 360 (720)
Q Consensus 348 dP~~Rpta~eiL~ 360 (720)
||.+|||+.++++
T Consensus 278 dP~~Rps~~~i~~ 290 (303)
T 3gxj_A 278 NGAARLTALRIKK 290 (303)
T ss_dssp SGGGSCCHHHHHH
T ss_pred CcccCCCHHHHHH
Confidence 9999999999986
No 232
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=99.97 E-value=7.2e-31 Score=273.98 Aligned_cols=202 Identities=15% Similarity=0.151 Sum_probs=156.4
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~-~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
..+|..+|.+++||||+++++ ++..+ .++++||| .+++|.+++.... ..+++.+++.++.||+.||.|||++|
T Consensus 55 ~~~E~~~l~~l~h~~i~~~~~-~~~~~----~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ 129 (279)
T 1qpc_A 55 FLAEANLMKQLQHQRLVRLYA-VVTQE----PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 129 (279)
T ss_dssp HHHHHHHHHHCCCTTBCCEEE-EECSS----SCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhCCCcCcceEEE-EEcCC----CcEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 346788999999999999999 55433 46899999 7999999995432 25899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++.+||+|||.+.........
T Consensus 130 i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-------------------------------------------- 165 (279)
T 1qpc_A 130 YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYT-------------------------------------------- 165 (279)
T ss_dssp EECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEE--------------------------------------------
T ss_pred eeccCCCHhhEEEcCCCCEEECCCcccccccCcccc--------------------------------------------
Confidence 999999999999999999999999887432111000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......+|+.|+|||++.+..++.++|||||||++
T Consensus 166 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 200 (279)
T 1qpc_A 166 ---------------------------------------------AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 200 (279)
T ss_dssp ---------------------------------------------CCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHH
T ss_pred ---------------------------------------------cccCCCCccCccChhhhccCCCCchhhhHHHHHHH
Confidence 00013468899999999888899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||...... .....+.....+.......+...+|+.+||+.||.+|||+.++++
T Consensus 201 ~el~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~ 262 (279)
T 1qpc_A 201 TEIVTHGRIPYPGMTNP-EVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRS 262 (279)
T ss_dssp HHHHTTTCCSSTTCCHH-HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHhCCCCCCcccCHH-HHHHHHhcccCCCCcccccHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 99998 56554433 344444443322222222344559999999999999999999985
No 233
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=99.97 E-value=7.3e-31 Score=303.62 Aligned_cols=213 Identities=15% Similarity=0.140 Sum_probs=157.3
Q ss_pred eeeehhhhcccCCCCCceecccceeec---CCCCCcEEEEEec-CCCCHHHHHhCCC--CCCCHHHHHHHHHHHHHHHHH
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCEN---EAAIDPFVHAIEW-GDVSLRQWLDKPK--RSVDVYECLHIFRQIVEIVYA 136 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~---~~~~~~~~lv~E~-~ggsL~~~L~~~~--~~l~~~~~~~i~~QIl~aL~y 136 (720)
+..+|..+|.+++||||+++++ ++.. .......|+|||| .|++|.+++.... ..+++..++.++.||+.||.|
T Consensus 58 ~~~~Ei~iL~~L~HpnIV~l~~-v~~~~~~~~~~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~y 136 (676)
T 3qa8_A 58 RWCLEIQIMKKLNHPNVVSARE-VPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRY 136 (676)
T ss_dssp HHHHHHHHHHHCCBTTBCCEEE-CCTTTCCCCTTSSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCCceee-eecccccccCCCeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHH
Confidence 3447888999999999999999 4332 1123467999999 7999999996533 358999999999999999999
Q ss_pred HHHcCceeccCCCCcEEEccCCc---eEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccc
Q 004998 137 AHSQGIVVHNVRPSCFVMSSFNH---VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLV 213 (720)
Q Consensus 137 LHs~gIvHrDLKP~NILl~~~~~---vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla 213 (720)
||++||+||||||+||+++.++. ++|+|||.+...+...
T Consensus 137 LHs~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~~~~~~~-------------------------------------- 178 (676)
T 3qa8_A 137 LHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE-------------------------------------- 178 (676)
T ss_dssp HHHTTBCCCCCCSTTEEEECCSSSCEEEECSCCCCCBTTSCC--------------------------------------
T ss_pred HHHCCCccCCCCHHHeEeecCCCceeEEEccccccccccccc--------------------------------------
Confidence 99999999999999999997665 8998888774321110
Q ss_pred cCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCcccc
Q 004998 214 TAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASD 293 (720)
Q Consensus 214 ~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sD 293 (720)
......||+.|+|||++.+..++.++|
T Consensus 179 -----------------------------------------------------~~~~~~gt~~Y~APE~l~~~~~s~ksD 205 (676)
T 3qa8_A 179 -----------------------------------------------------LCTEFVGTLQYLAPELLEQKKYTVTVD 205 (676)
T ss_dssp -----------------------------------------------------CCCCCCSCCTTCSSCSSCCSCCSTTHH
T ss_pred -----------------------------------------------------ccccccCCcccCChHHhccCCCCchhH
Confidence 001146899999999999989999999
Q ss_pred chhhhhhhhhccc---cCCCCchHHHHHHHhh-------------cC--------CCCccccccCch-HHHHHHHcCCCC
Q 004998 294 IYRLGVLLFELFC---PFSTGEEKTRTMSSLR-------------HR--------VLPPQLLLKFPK-EASFCLWLLHPE 348 (720)
Q Consensus 294 IwSLGvll~eLlt---pf~~~~~~~~~~~~l~-------------~~--------~~p~~~~~~~p~-~~~li~~~L~~d 348 (720)
||||||++|+|++ ||.+..........+. .+ ..|..+...++. ..+||.+||.+|
T Consensus 206 IwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~D 285 (676)
T 3qa8_A 206 YWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWH 285 (676)
T ss_dssp HHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSS
T ss_pred HHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCC
Confidence 9999999999999 6655322211100000 00 001112222333 349999999999
Q ss_pred CCCCCChHHHHcCcccCCC
Q 004998 349 PSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 349 P~~Rpta~eiL~hp~~~~~ 367 (720)
|.+|||+.++|+||||...
T Consensus 286 P~kRPTa~elL~hp~F~~l 304 (676)
T 3qa8_A 286 QRQRGTDPQNPNVGCFQAL 304 (676)
T ss_dssp CC---CCTTCCCCTTHHHH
T ss_pred HhhCcCHHHHhcCHHHHHH
Confidence 9999999999999999875
No 234
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=99.96 E-value=2.2e-30 Score=272.18 Aligned_cols=211 Identities=18% Similarity=0.157 Sum_probs=156.2
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..+|..++..+.|++++..+..+.... ..++++|||.+++|.+++......+++.+++.++.||+.||.|||++||+
T Consensus 51 ~~~e~~~l~~l~~~~~i~~~~~~~~~~---~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iv 127 (296)
T 3uzp_A 51 LHIESKIYKMMQGGVGIPTIRWCGAEG---DYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFI 127 (296)
T ss_dssp HHHHHHHHHHHTTSTTCCCEEEEEEET---TEEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHHHhhcCCCCCccccccCCC---CceEEEEEecCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 346777899999999888887343433 26799999999999999965556699999999999999999999999999
Q ss_pred eccCCCCcEEEc---cCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004998 144 VHNVRPSCFVMS---SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 144 HrDLKP~NILl~---~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||||||+|||++ .++.+||+|||.+........... .
T Consensus 128 H~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~------------------------------~---------- 167 (296)
T 3uzp_A 128 HRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQH------------------------------I---------- 167 (296)
T ss_dssp CSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCB------------------------------C----------
T ss_pred eCCCCHHHeEEecCCCCCeEEEeeCCCcccccccccccc------------------------------c----------
Confidence 999999999994 888999999998854322100000 0
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhh
Q 004998 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
. ........||+.|+|||++.+..++.++|||||||+
T Consensus 168 ------------------------------------------~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~i 204 (296)
T 3uzp_A 168 ------------------------------------------P-YRENKNLTGTARYASINTHLGIEQSRRDDLESLGYV 204 (296)
T ss_dssp ------------------------------------------C-CCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHH
T ss_pred ------------------------------------------c-cccccccccccccCChhhhcCCCCCcchhhHHHHHH
Confidence 0 000112478999999999999999999999999999
Q ss_pred hhhccc---cCCCCch--HHHHHHHhh---cCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 301 LFELFC---PFSTGEE--KTRTMSSLR---HRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 301 l~eLlt---pf~~~~~--~~~~~~~l~---~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
+|||++ ||..... ....+..+. .....+.+...+| ...+|+.+||+.||.+|||+.++++
T Consensus 205 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~ 273 (296)
T 3uzp_A 205 LMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQ 273 (296)
T ss_dssp HHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHH
T ss_pred HHHHHhCCCCCCCcCchhhhhhhhhhcccccCCchHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHH
Confidence 999999 6654211 001111111 1111122233444 4459999999999999999999985
No 235
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=99.96 E-value=9.5e-31 Score=276.93 Aligned_cols=205 Identities=14% Similarity=0.146 Sum_probs=152.6
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC--CCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK--PKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~--~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
+..+|..++.+++||||+++++ ++.+.. ..+++||| .+++|.+++.. ....+++..++.++.||+.||.|||+
T Consensus 76 ~~~~E~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~ 151 (307)
T 2nru_A 76 QFDQEIKVMAKCQHENLVELLG-FSSDGD---DLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHE 151 (307)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EECSSS---SCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCeEEEEE-EEecCC---ceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhc
Confidence 3447888999999999999999 554443 56999999 79999999943 23459999999999999999999999
Q ss_pred cCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004998 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||+||||||+||+++.++.+||+|||.+...+.....
T Consensus 152 ~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~------------------------------------------ 189 (307)
T 2nru_A 152 NHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQT------------------------------------------ 189 (307)
T ss_dssp TTEECSCCCGGGEEECTTCCEEECCCTTCEECCSCSSC------------------------------------------
T ss_pred CCeecCCCCHHHEEEcCCCcEEEeeccccccccccccc------------------------------------------
Confidence 99999999999999999999999999887432111000
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhh
Q 004998 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
.......||+.|+|||++.+. ++.++|||||||
T Consensus 190 ----------------------------------------------~~~~~~~g~~~y~aPE~~~~~-~~~~~Dv~slG~ 222 (307)
T 2nru_A 190 ----------------------------------------------VMTSRIVGTTAYMAPEALRGE-ITPKSDIYSFGV 222 (307)
T ss_dssp ----------------------------------------------EECSSCCSCGGGCCHHHHTTE-ECTHHHHHHHHH
T ss_pred ----------------------------------------------ccccccCCCcCcCChHHhcCC-CCccchhHHHHH
Confidence 000114689999999998764 899999999999
Q ss_pred hhhhccc---cCCCCchH---HHHHHHhhc----------CCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 300 LLFELFC---PFSTGEEK---TRTMSSLRH----------RVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~---~~~~~~l~~----------~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
++|+|++ ||...... ......+.. ..+++......+...+|+.+||+.||.+|||+.++++
T Consensus 223 il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~ 299 (307)
T 2nru_A 223 VLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQ 299 (307)
T ss_dssp HHHHHHHCCCSBCTTBSSSBTTHHHHHHHTTSCCHHHHSCSSCSCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred HHHHHHHCCCCcccCcchHHHHHHHHHhhhhhhhhhhhccccccccchHHHHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 9999999 56543221 111111111 1111111111123458999999999999999999986
No 236
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=99.96 E-value=7.3e-31 Score=279.09 Aligned_cols=217 Identities=12% Similarity=0.110 Sum_probs=156.2
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC---CCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~---~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
..+|..++..++||||+++++.+.........+|+|||| .+++|.+++.. ....+++.+++.++.||+.||.|||+
T Consensus 73 ~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~ 152 (317)
T 2buj_A 73 AQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHA 152 (317)
T ss_dssp HHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 347788999999999999999444333334468999999 88899999943 45569999999999999999999999
Q ss_pred cCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004998 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||+||||||+|||++.++.++|+|||.+......... .
T Consensus 153 ~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~--------------------------------~--------- 191 (317)
T 2buj_A 153 KGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEG--------------------------------S--------- 191 (317)
T ss_dssp TTEECCCCCGGGEEECTTSCEEECCCSSCEESCEEEES--------------------------------H---------
T ss_pred CCcccCCCCHHHEEEcCCCCEEEEecCcchhccccccc--------------------------------c---------
Confidence 99999999999999999999999999987432110000 0
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC---CCccccchh
Q 004998 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP---VSCASDIYR 296 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~---~s~~sDIwS 296 (720)
...... .......||+.|+|||++.+.. ++.++||||
T Consensus 192 ----------------------~~~~~~------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~s 231 (317)
T 2buj_A 192 ----------------------RQALTL------------------QDWAAQRCTISYRAPELFSVQSHCVIDERTDVWS 231 (317)
T ss_dssp ----------------------HHHHHH------------------HHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHH
T ss_pred ----------------------cccccc------------------cccccccCCcccCCHhHhccCCCcCCCchhhHHH
Confidence 000000 0001146799999999997665 689999999
Q ss_pred hhhhhhhccccCCCCchHH----HHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004998 297 LGVLLFELFCPFSTGEEKT----RTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 297 LGvll~eLltpf~~~~~~~----~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~h 361 (720)
|||++|||+++..++.... .....+......+......+...+||.+||+.||.+|||+.+++++
T Consensus 232 lG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 300 (317)
T 2buj_A 232 LGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQ 300 (317)
T ss_dssp HHHHHHHHHHSSCTTHHHHHTTSCHHHHHHCC--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHHhCCCChhhhhcccchhhHHhhccCCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHH
Confidence 9999999999433322110 1111222222222222233455699999999999999999999974
No 237
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=99.96 E-value=6.6e-31 Score=300.75 Aligned_cols=206 Identities=14% Similarity=0.164 Sum_probs=159.5
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
.+|+.+|.+++|||||++++ ++... .+|+|||| .+++|.++|.. .+..+++.+++.|+.||+.||.|||++||
T Consensus 310 ~~E~~~l~~l~hpniv~~~~-~~~~~----~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~i 384 (535)
T 2h8h_A 310 LQEAQVMKKLRHEKLVQLYA-VVSEE----PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY 384 (535)
T ss_dssp HHHHHHHHHCCCTTBCCEEE-EECSS----SCEEEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhCCCCCEeeEEE-EEeec----cceEeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 47888999999999999999 55442 47999999 88999999943 23458999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
|||||||+|||++.++.+||+|||+++...... +
T Consensus 385 vHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~----------------------------------~------------ 418 (535)
T 2h8h_A 385 VHRDLRAANILVGENLVCKVADFGLARLIEDNE----------------------------------Y------------ 418 (535)
T ss_dssp CCSCCSGGGEEECGGGCEEECCTTSTTTCCCHH----------------------------------H------------
T ss_pred eCCCCCHhhEEEcCCCcEEEcccccceecCCCc----------------------------------e------------
Confidence 999999999999999999999999884321100 0
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
. ......++..|+|||++.+..++.++|||||||+||
T Consensus 419 ------------------------~-------------------~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~ 455 (535)
T 2h8h_A 419 ------------------------T-------------------ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLT 455 (535)
T ss_dssp ------------------------H-------------------TTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred ------------------------e-------------------cccCCcCcccccCHHHhccCCCCchhhHHHHHHHHH
Confidence 0 000024578899999999888999999999999999
Q ss_pred hccc----cCCCCchHHHHHHHhhcCCCCccccccCch-HHHHHHHcCCCCCCCCCChHHHHc--CcccCC
Q 004998 303 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQ--SEFLNE 366 (720)
Q Consensus 303 eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~-~~~li~~~L~~dP~~Rpta~eiL~--hp~~~~ 366 (720)
||++ ||...... .....+..+...+. ...++. ..+||.+||+.||++|||+.+|++ ..++..
T Consensus 456 el~t~g~~P~~~~~~~-~~~~~i~~~~~~~~-~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~ 524 (535)
T 2h8h_A 456 ELTTKGRVPYPGMVNR-EVLDQVERGYRMPC-PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 524 (535)
T ss_dssp HHTTTTCCSSTTCCHH-HHHHHHHTTCCCCC-CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCC
T ss_pred HHHhCCCCCCCCCCHH-HHHHHHHcCCCCCC-CCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhc
Confidence 9998 66655443 34444444433222 233444 559999999999999999999986 244443
No 238
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=99.96 E-value=2e-30 Score=277.52 Aligned_cols=209 Identities=18% Similarity=0.139 Sum_probs=155.2
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++||||+++++ ++.... ...+++|||| .+++|.+++......+++.+++.++.||+.||.|||++|
T Consensus 88 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ 165 (326)
T 2w1i_A 88 DFEREIEILKSLQHDNIVKYKG-VCYSAG-RRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR 165 (326)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEE-EECC-----CCEEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCeeeEEE-EEEecC-CCceEEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3447888999999999999999 443322 2257999999 789999999766556999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++.+||+|||.+......... .
T Consensus 166 ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~~~~~--------------------------------~----------- 202 (326)
T 2w1i_A 166 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEY--------------------------------Y----------- 202 (326)
T ss_dssp EECSCCCGGGEEEEETTEEEECCCTTCEECCSSCSE--------------------------------E-----------
T ss_pred EeccCCCcceEEEcCCCcEEEecCcchhhccccccc--------------------------------c-----------
Confidence 999999999999999999999999987443211000 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
. ......++..|+|||++.+..++.++|||||||++
T Consensus 203 ------------------------~--------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 238 (326)
T 2w1i_A 203 ------------------------K--------------------VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVL 238 (326)
T ss_dssp ------------------------E--------------------CSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHH
T ss_pred ------------------------c--------------------cccCCCCceeEECchhhcCCCCCchhhHHHHHHHH
Confidence 0 00013567889999999988899999999999999
Q ss_pred hhccccCCCCchH------------------HHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 302 FELFCPFSTGEEK------------------TRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLltpf~~~~~~------------------~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||+++..+.... ......+.....++......+...+||.+||..||.+|||+.|+++
T Consensus 239 ~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~ 315 (326)
T 2w1i_A 239 YELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL 315 (326)
T ss_dssp HHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 9999932222111 0111222222222222223344559999999999999999999985
No 239
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=99.96 E-value=1.8e-30 Score=277.60 Aligned_cols=215 Identities=18% Similarity=0.246 Sum_probs=139.3
Q ss_pred eehhhhcccCC-CCCceecccceeec----CCCCCcEEEEEecCCCCHHHHHhC--CCCCCCHHHHHHHHHHHHHHHHHH
Q 004998 65 HSDGVELTHGD-HLRNQGGLSGVCEN----EAAIDPFVHAIEWGDVSLRQWLDK--PKRSVDVYECLHIFRQIVEIVYAA 137 (720)
Q Consensus 65 ~~e~~~Ls~l~-HpnIV~l~~~~~~~----~~~~~~~~lv~E~~ggsL~~~L~~--~~~~l~~~~~~~i~~QIl~aL~yL 137 (720)
.+|..++.++. ||||+++++.+... ......++++|||.+++|.+++.. ....+++.+++.|+.||+.||.||
T Consensus 73 ~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~L 152 (337)
T 3ll6_A 73 IQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHM 152 (337)
T ss_dssp HHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEEEEEEEECCSEEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccCCChhhccccccccccccccCCceEEEEEEecCCCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHH
Confidence 46777888885 99999999944221 122335899999977899999843 344599999999999999999999
Q ss_pred HHcC--ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccC
Q 004998 138 HSQG--IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTA 215 (720)
Q Consensus 138 Hs~g--IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~ 215 (720)
|++| |+||||||+|||++.++.+||+|||++...+..... .+ ..
T Consensus 153 H~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~-------------------------------~~--~~- 198 (337)
T 3ll6_A 153 HRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDY-------------------------------SW--SA- 198 (337)
T ss_dssp HTSSSCCBCCCCCGGGCEECTTSCEEBCCCTTCBCCSSCC----------------------------------------
T ss_pred HhCCCCEEEccCCcccEEECCCCCEEEecCccceeccccCcc-------------------------------cc--cc-
Confidence 9999 999999999999999999999999998654322100 00 00
Q ss_pred CCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccc---cCCCCCccc
Q 004998 216 PTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEEL---AGAPVSCAS 292 (720)
Q Consensus 216 ~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l---~~~~~s~~s 292 (720)
.............||+.|+|||++ .+..++.++
T Consensus 199 --------------------------------------------~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~ 234 (337)
T 3ll6_A 199 --------------------------------------------QRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQ 234 (337)
T ss_dssp ---------------------------------------------------------------------CCTTSCSSHHH
T ss_pred --------------------------------------------cccccchhhccccCCCCcCChhhhhccccCCCChHH
Confidence 000000001124689999999998 455689999
Q ss_pred cchhhhhhhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004998 293 DIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 293 DIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~h 361 (720)
|||||||++|||++ ||...... ..+......+......+...+|+.+||++||.+|||+.|++++
T Consensus 235 Dv~slG~il~el~~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 302 (337)
T 3ll6_A 235 DIWALGCILYLLCFRQHPFEDGAKL----RIVNGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQ 302 (337)
T ss_dssp HHHHHHHHHHHHHHSSCCC----------------CCCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred hHHHHHHHHHHHHhCCCCCcchhHH----HhhcCcccCCcccccchHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 99999999999999 55443221 1111111122222233455699999999999999999999974
No 240
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=99.96 E-value=1.2e-30 Score=282.42 Aligned_cols=212 Identities=11% Similarity=0.048 Sum_probs=154.0
Q ss_pred eeehhhhcccCCCCCceecccc--------------eeecCCCCCcEEEEEecCCCCHHHHHhCC-CCCCCHHHHHHHHH
Q 004998 64 KHSDGVELTHGDHLRNQGGLSG--------------VCENEAAIDPFVHAIEWGDVSLRQWLDKP-KRSVDVYECLHIFR 128 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~--------------~~~~~~~~~~~~lv~E~~ggsL~~~L~~~-~~~l~~~~~~~i~~ 128 (720)
..+|..++.+++||||+++++. ++.. ....+|+||||.+++|.+++... ...+++.+++.|+.
T Consensus 89 ~~~E~~~l~~l~h~niv~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~ 166 (352)
T 2jii_A 89 LFNEQNFFQRAAKPLQVNKWKKLYSTPLLAIPTCMGFGVH--QDKYRFLVLPSLGRSLQSALDVSPKHVLSERSVLQVAC 166 (352)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHTTCTTCSCCCCCEEEEE--TTTEEEEEEECCCEEHHHHHHHSGGGCCCHHHHHHHHH
T ss_pred HHHHHHHHHHhcccchhhhhhhhccCCccCccchhhcccc--CCcEEEEEecCCCcCHHHHHHhCCcCCCCHHHHHHHHH
Confidence 3367889999999999985431 2222 12368999999999999999543 35599999999999
Q ss_pred HHHHHHHHHHHcCceeccCCCCcEEEccCC--ceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccc
Q 004998 129 QIVEIVYAAHSQGIVVHNVRPSCFVMSSFN--HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLR 206 (720)
Q Consensus 129 QIl~aL~yLHs~gIvHrDLKP~NILl~~~~--~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 206 (720)
||+.||.|||++||+||||||+|||++.++ .+||+|||++.........
T Consensus 167 qi~~~L~~LH~~~ivH~Dikp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~----------------------------- 217 (352)
T 2jii_A 167 RLLDALEFLHENEYVHGNVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKH----------------------------- 217 (352)
T ss_dssp HHHHHHHHHHHTTCBCSCCCGGGEEEETTEEEEEEECCGGGCBCSSGGGCC-----------------------------
T ss_pred HHHHHHHHHHhCCccCCCCCHHHEEEcCCCCceEEEecCcceeeccCCCcc-----------------------------
Confidence 999999999999999999999999999888 8999999888543211000
Q ss_pred ccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC
Q 004998 207 REDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA 286 (720)
Q Consensus 207 l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 286 (720)
..+ .........||+.|+|||++.+.
T Consensus 218 -~~~-----------------------------------------------------~~~~~~~~~gt~~y~aPE~~~~~ 243 (352)
T 2jii_A 218 -VAY-----------------------------------------------------VEGSRSPHEGDLEFISMDLHKGC 243 (352)
T ss_dssp -CCC-----------------------------------------------------CTTSSCTTCSCTTTCCHHHHTTC
T ss_pred -ccc-----------------------------------------------------cccccccccCCccccCHHHHccC
Confidence 000 00000124789999999999998
Q ss_pred CCCccccchhhhhhhhhccc---cCCCCc-hHHHHHHHhhc-CCCCcccc------cc-CchHHHHHHHcCCCCCCCCCC
Q 004998 287 PVSCASDIYRLGVLLFELFC---PFSTGE-EKTRTMSSLRH-RVLPPQLL------LK-FPKEASFCLWLLHPEPSGRPK 354 (720)
Q Consensus 287 ~~s~~sDIwSLGvll~eLlt---pf~~~~-~~~~~~~~l~~-~~~p~~~~------~~-~p~~~~li~~~L~~dP~~Rpt 354 (720)
.++.++|||||||++|||++ ||.... ........... ...++.+. .. .+...+|+.+||..||.+|||
T Consensus 244 ~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps 323 (352)
T 2jii_A 244 GPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNTEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPP 323 (352)
T ss_dssp CCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCC
T ss_pred CCCchhhHHHHHHHHHHHHhCCCCcccCCcCHHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCC
Confidence 89999999999999999999 665432 11122211110 01111111 12 344559999999999999999
Q ss_pred hHHHHc
Q 004998 355 MGELLQ 360 (720)
Q Consensus 355 a~eiL~ 360 (720)
+.++++
T Consensus 324 ~~~l~~ 329 (352)
T 2jii_A 324 YAMLRN 329 (352)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999986
No 241
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=99.96 E-value=6.7e-31 Score=289.37 Aligned_cols=203 Identities=15% Similarity=0.172 Sum_probs=151.9
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC--CCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP--KRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~--~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
.+|..+|.+++||||+++++ ++.... ...+|+|||| .|++|.+++... ...+++..++.++.||+.||.|||++|
T Consensus 55 ~~E~~~l~~l~hpnIv~~~~-~~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ 132 (396)
T 4eut_A 55 MREFEVLKKLNHKNIVKLFA-IEEETT-TRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG 132 (396)
T ss_dssp HHHHHHHHHCCCTTBCCEEE-EEECTT-TCCEEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhcCCCCCCeEEE-eeccCC-CCeeEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 37888999999999999999 444332 3367999999 789999999543 223899999999999999999999999
Q ss_pred ceeccCCCCcEEE----ccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCC
Q 004998 142 IVVHNVRPSCFVM----SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 142 IvHrDLKP~NILl----~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~ 217 (720)
|+||||||+|||+ +.++.+||+|||.+.......
T Consensus 133 ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~~~------------------------------------------ 170 (396)
T 4eut_A 133 IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDE------------------------------------------ 170 (396)
T ss_dssp EECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCCGG------------------------------------------
T ss_pred EEECCcCHHHEEEeecCCCceeEEEecCCCceEccCCC------------------------------------------
Confidence 9999999999999 677779998888774321110
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC--------CCCC
Q 004998 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG--------APVS 289 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~--------~~~s 289 (720)
......||+.|+|||++.+ ..++
T Consensus 171 -------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~ 201 (396)
T 4eut_A 171 -------------------------------------------------QFVSLYGTEEYLHPDMYERAVLRKDHQKKYG 201 (396)
T ss_dssp -------------------------------------------------GSSCSSSCCTTCCHHHHHHHCC--CHHHHHH
T ss_pred -------------------------------------------------ccccccCCccccCHHHhhccccccccccCCC
Confidence 0011468999999999865 4578
Q ss_pred ccccchhhhhhhhhccc---cCCCC---chHHHHHHHhhcCCCCcc-----------------------ccccCc-hHHH
Q 004998 290 CASDIYRLGVLLFELFC---PFSTG---EEKTRTMSSLRHRVLPPQ-----------------------LLLKFP-KEAS 339 (720)
Q Consensus 290 ~~sDIwSLGvll~eLlt---pf~~~---~~~~~~~~~l~~~~~p~~-----------------------~~~~~p-~~~~ 339 (720)
.++|||||||++|||++ ||.+. ......+..+..+..+.. +....+ ...+
T Consensus 202 ~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 281 (396)
T 4eut_A 202 ATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTP 281 (396)
T ss_dssp HHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCCcccchhheeccCCCcccCccCCcccccchHHHhhchH
Confidence 89999999999999999 66432 222334444443322211 001112 2348
Q ss_pred HHHHcCCCCCCCCCChHHHHc
Q 004998 340 FCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 340 li~~~L~~dP~~Rpta~eiL~ 360 (720)
|+.+||.+||++||++.++++
T Consensus 282 ll~~~L~~dP~~R~s~~e~l~ 302 (396)
T 4eut_A 282 VLANILEADQEKCWGFDQFFA 302 (396)
T ss_dssp HHHHHSCCCTTTSCCHHHHHH
T ss_pred HHHHhhccChhhhccHHHHHH
Confidence 999999999999999999865
No 242
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=99.96 E-value=4e-30 Score=300.83 Aligned_cols=202 Identities=18% Similarity=0.164 Sum_probs=157.9
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..+|.+++|||||++++ ++.++ .+|+|||| .+++|.+++......+++..++.++.||+.||.|||++||
T Consensus 438 ~~~E~~~l~~l~HpnIv~l~~-~~~~~----~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~gi 512 (656)
T 2j0j_A 438 FLQEALTMRQFDHPHIVKLIG-VITEN----PVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRF 512 (656)
T ss_dssp HHHHHHHHHHCCCTTBCCEEE-EECSS----SCEEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhCCCCCCCeEEE-EEecC----ceEEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 347888999999999999999 55332 46999999 8899999997665569999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.+||+|||++.........
T Consensus 513 vHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~~~--------------------------------------------- 547 (656)
T 2j0j_A 513 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY--------------------------------------------- 547 (656)
T ss_dssp CCSCCSGGGEEEEETTEEEECCCCCCCSCCC-------------------------------------------------
T ss_pred cccccchHhEEEeCCCCEEEEecCCCeecCCCcce---------------------------------------------
Confidence 99999999999999999999999887443111000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......+|+.|+|||++.+..++.++|||||||++|
T Consensus 548 --------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ 583 (656)
T 2j0j_A 548 --------------------------------------------KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMW 583 (656)
T ss_dssp --------------------------------------------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred --------------------------------------------eccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHH
Confidence 000135688999999998888999999999999999
Q ss_pred hccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 303 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 303 eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
||++ ||...... .....+.....++......+...+||.+||+.||.+|||+.++++
T Consensus 584 ellt~g~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~ 644 (656)
T 2j0j_A 584 EILMHGVKPFQGVKNN-DVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKA 644 (656)
T ss_dssp HHHTTSCCTTTTCCHH-HHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHcCCCCCCCCCHH-HHHHHHHcCCCCCCCccccHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 9996 66655443 344444444333322223345569999999999999999999985
No 243
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=99.96 E-value=3.8e-31 Score=293.11 Aligned_cols=175 Identities=13% Similarity=0.142 Sum_probs=135.2
Q ss_pred CCcEEEEEecCCCCHHHHHh------CCCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccC
Q 004998 93 IDPFVHAIEWGDVSLRQWLD------KPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESA 166 (720)
Q Consensus 93 ~~~~~lv~E~~ggsL~~~L~------~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg 166 (720)
...++++|++.+++|.++++ .....+++..++.++.||+.||.|||++|||||||||+||||+.++.+||+|||
T Consensus 177 ~~~~~~~~~~~~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiHrDiKp~NILl~~~~~~kL~DFG 256 (413)
T 3dzo_A 177 VLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFE 256 (413)
T ss_dssp CCSEEEEEECCSEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCGG
T ss_pred ccceEEEeehhcCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcccceEEEecCCeEEEEecc
Confidence 44578999998899999983 234457888999999999999999999999999999999999999999999888
Q ss_pred cccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccCCCcccccccccccccccc
Q 004998 167 SCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHK 246 (720)
Q Consensus 167 ~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~ 246 (720)
+++..+..
T Consensus 257 ~a~~~~~~------------------------------------------------------------------------ 264 (413)
T 3dzo_A 257 HLVRDGAS------------------------------------------------------------------------ 264 (413)
T ss_dssp GCEETTEE------------------------------------------------------------------------
T ss_pred ceeecCCc------------------------------------------------------------------------
Confidence 86322100
Q ss_pred ccccccchhhhhcccCCCCccccccccCCcccCCccc----------cCCCCCccccchhhhhhhhhccc---cCCCCch
Q 004998 247 ILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEEL----------AGAPVSCASDIYRLGVLLFELFC---PFSTGEE 313 (720)
Q Consensus 247 ~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l----------~~~~~s~~sDIwSLGvll~eLlt---pf~~~~~ 313 (720)
....+| +.|+|||++ .+..++.++|||||||++|||++ ||.....
T Consensus 265 ---------------------~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~ 322 (413)
T 3dzo_A 265 ---------------------AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAA 322 (413)
T ss_dssp ---------------------ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCCCCTTGG
T ss_pred ---------------------cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCCCCCCcch
Confidence 011467 999999999 55558999999999999999999 6655432
Q ss_pred HHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 314 KTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 314 ~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
... ...+ ++. .....+...+||.+||++||.+||++.++++||||+..
T Consensus 323 ~~~-~~~~----~~~-~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~~~~~~~~ 370 (413)
T 3dzo_A 323 LGG-SEWI----FRS-CKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQL 370 (413)
T ss_dssp GSC-SGGG----GSS-CCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHH
T ss_pred hhh-HHHH----Hhh-cccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHHHH
Confidence 211 1111 110 01122344599999999999999999999999999764
No 244
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=99.96 E-value=3.5e-30 Score=276.59 Aligned_cols=207 Identities=12% Similarity=0.121 Sum_probs=151.4
Q ss_pred ehhhhccc--CCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH----
Q 004998 66 SDGVELTH--GDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAH---- 138 (720)
Q Consensus 66 ~e~~~Ls~--l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLH---- 138 (720)
+|..++.. ++||||+++++.+.........+|+|||| .+++|.+++.+. .+++.+++.++.||+.||.|||
T Consensus 83 ~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~ 160 (342)
T 1b6c_B 83 REAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIV 160 (342)
T ss_dssp HHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEEEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBC
T ss_pred HHHHHHHHhhcCCCcEEEEEeeecccCCccceeEEEEeecCCCcHHHHHhcc--CccHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34445444 89999999999444444333478999999 888999999653 4899999999999999999999
Q ss_pred ----HcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccccccccccc
Q 004998 139 ----SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVT 214 (720)
Q Consensus 139 ----s~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~ 214 (720)
++||+||||||+|||++.++.+||+|||++......... .
T Consensus 161 ~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~--------------------------------~---- 204 (342)
T 1b6c_B 161 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDT--------------------------------I---- 204 (342)
T ss_dssp STTCBCEEECSCCSGGGEEECTTSCEEECCCTTCEEEETTTTE--------------------------------E----
T ss_pred hhcccCCeeeCCCCHHHEEECCCCCEEEEECCCceeccccccc--------------------------------c----
Confidence 899999999999999999999999999987432111000 0
Q ss_pred CCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC------C
Q 004998 215 APTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP------V 288 (720)
Q Consensus 215 ~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~------~ 288 (720)
. .......||+.|+|||++.+.. +
T Consensus 205 -------------------------------~-------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~ 234 (342)
T 1b6c_B 205 -------------------------------D-------------------IAPNHRVGTKRYMAPEVLDDSINMKHFES 234 (342)
T ss_dssp -------------------------------E-------------------ECCCSCCCCGGGCCHHHHTSCCCTTCHHH
T ss_pred -------------------------------c-------------------cccccCCcCcccCCHhhhccccccccccc
Confidence 0 0001146899999999998763 3
Q ss_pred Cccccchhhhhhhhhcccc-------------CCCC----chHHHHHHHhhcCCCCccccccC------chHHHHHHHcC
Q 004998 289 SCASDIYRLGVLLFELFCP-------------FSTG----EEKTRTMSSLRHRVLPPQLLLKF------PKEASFCLWLL 345 (720)
Q Consensus 289 s~~sDIwSLGvll~eLltp-------------f~~~----~~~~~~~~~l~~~~~p~~~~~~~------p~~~~li~~~L 345 (720)
+.++|||||||++|||+++ |... .........+......+.+...+ +...+|+.+||
T Consensus 235 ~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 314 (342)
T 1b6c_B 235 FKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECW 314 (342)
T ss_dssp HHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHC
T ss_pred CCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCcccHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHh
Confidence 4789999999999999973 3221 11223333343433433333222 23458999999
Q ss_pred CCCCCCCCChHHHHc
Q 004998 346 HPEPSGRPKMGELLQ 360 (720)
Q Consensus 346 ~~dP~~Rpta~eiL~ 360 (720)
+.||.+|||+.++++
T Consensus 315 ~~dp~~Rps~~~i~~ 329 (342)
T 1b6c_B 315 YANGAARLTALRIKK 329 (342)
T ss_dssp CSSGGGSCCHHHHHH
T ss_pred ccChhhCCCHHHHHH
Confidence 999999999999986
No 245
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=99.96 E-value=1.9e-30 Score=282.33 Aligned_cols=197 Identities=11% Similarity=0.054 Sum_probs=142.7
Q ss_pred ehhhhcccCC---CCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC----CCCCCCHHHHHHHHHHHHHHHHHH
Q 004998 66 SDGVELTHGD---HLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK----PKRSVDVYECLHIFRQIVEIVYAA 137 (720)
Q Consensus 66 ~e~~~Ls~l~---HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~----~~~~l~~~~~~~i~~QIl~aL~yL 137 (720)
+|..++..+. |+||+++++ ++.... ..|+|||| .|++|.+++.. ....+++..++.|+.||+.||.||
T Consensus 113 ~e~~~~~~l~~~~~~~iv~~~~-~~~~~~---~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~l 188 (365)
T 3e7e_A 113 IGTQLMERLKPSMQHMFMKFYS-AHLFQN---GSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQV 188 (365)
T ss_dssp HHHHHHHHSCGGGGGGBCCEEE-EEECSS---CEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhhhhhhhhhhhe-eeecCC---CcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHH
Confidence 3444444444 999999999 444443 57999999 89999999953 345699999999999999999999
Q ss_pred HHcCceeccCCCCcEEEcc-----------CCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccc
Q 004998 138 HSQGIVVHNVRPSCFVMSS-----------FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLR 206 (720)
Q Consensus 138 Hs~gIvHrDLKP~NILl~~-----------~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 206 (720)
|++|||||||||+|||++. ++.+||+|||++........
T Consensus 189 H~~~ivHrDiKp~NIll~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~------------------------------ 238 (365)
T 3e7e_A 189 HDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPK------------------------------ 238 (365)
T ss_dssp HTTTEECCCCSGGGEEECGGGTCC------CTTEEECCCTTCEEGGGSCT------------------------------
T ss_pred hhCCeecCCCCHHHEEecccccCccccccccCCEEEeeCchhhhhhccCC------------------------------
Confidence 9999999999999999998 89999999888743210000
Q ss_pred ccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC
Q 004998 207 REDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA 286 (720)
Q Consensus 207 l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 286 (720)
.......+||+.|+|||++.+.
T Consensus 239 ----------------------------------------------------------~~~~~~~~gt~~y~aPE~~~~~ 260 (365)
T 3e7e_A 239 ----------------------------------------------------------GTIFTAKCETSGFQCVEMLSNK 260 (365)
T ss_dssp ----------------------------------------------------------TEEECCSSCTTSCCCHHHHTTC
T ss_pred ----------------------------------------------------------CceeeeecCCCCCCChHHhcCC
Confidence 0000124789999999999999
Q ss_pred CCCccccchhhhhhhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 287 PVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 287 ~~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
.++.++|||||||++|||++ ||....... ......++.. ...+...+++..||+.+|.+|++..+.|.
T Consensus 261 ~~~~~~DiwslG~il~elltg~~pf~~~~~~~----~~~~~~~~~~--~~~~~~~~~~~~~l~~~p~~r~~~~~~l~ 331 (365)
T 3e7e_A 261 PWNYQIDYFGVAATVYCMLFGTYMKVKNEGGE----CKPEGLFRRL--PHLDMWNEFFHVMLNIPDCHHLPSLDLLR 331 (365)
T ss_dssp CBSTHHHHHHHHHHHHHHHHSSCCCEEEETTE----EEECSCCTTC--SSHHHHHHHHHHHHCCCCTTCCCCHHHHH
T ss_pred CCCccccHHHHHHHHHHHHhCCCccccCCCCc----eeechhcccc--CcHHHHHHHHHHHcCCCCCCcchHHHHHH
Confidence 99999999999999999999 443322110 0001111111 11123348999999999999965444443
No 246
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=99.96 E-value=1.8e-29 Score=266.76 Aligned_cols=190 Identities=16% Similarity=0.225 Sum_probs=139.9
Q ss_pred ehhhhc-ccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 66 SDGVEL-THGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 66 ~e~~~L-s~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
+|..++ ..++||||+++++.+.........+|+|||| .|++|.+++... ...+++.+++.++.||+.||.|||++||
T Consensus 59 ~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i 138 (299)
T 3m2w_A 59 REVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 138 (299)
T ss_dssp HHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 455555 5579999999999443322223368999999 788999999543 3469999999999999999999999999
Q ss_pred eeccCCCCcEEEcc---CCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004998 143 VVHNVRPSCFVMSS---FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 143 vHrDLKP~NILl~~---~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||||||+|||++. ++.++|+|||++...
T Consensus 139 ~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~------------------------------------------------ 170 (299)
T 3m2w_A 139 AHRDVKPENLLYTSKRPNAILKLTDFGFAKET------------------------------------------------ 170 (299)
T ss_dssp ECCCCSGGGEEESSSSTTCCEEECCCTTCEEC------------------------------------------------
T ss_pred ccCCCCHHHEEEecCCCCCcEEEecccccccc------------------------------------------------
Confidence 99999999999997 788999888765110
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhh
Q 004998 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
.+..++.++|||||||
T Consensus 171 ----------------------------------------------------------------~~~~~~~~~DiwslG~ 186 (299)
T 3m2w_A 171 ----------------------------------------------------------------TGEKYDKSCDMWSLGV 186 (299)
T ss_dssp ----------------------------------------------------------------TTCGGGGHHHHHHHHH
T ss_pred ----------------------------------------------------------------ccccCCchhhHHHHHH
Confidence 0123688999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhcC------CCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004998 300 LLFELFC---PFSTGEEKTRTMSSLRHR------VLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~~------~~p~~~~~~~-p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
++|||++ ||....... ....+... .++......+ +...+||.+||++||.+|||+.|+|+||||....
T Consensus 187 il~el~tg~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~hp~~~~~~ 264 (299)
T 3m2w_A 187 IMYILLCGYPPFYSNHGLA-ISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST 264 (299)
T ss_dssp HHHHHHHSSCSCCC--------CCSCCSSCTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTGG
T ss_pred HHHHHHHCCCCCCCCcchh-hhHHHHHHHhhccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcChhhcccc
Confidence 9999999 565432221 11111111 1121111233 3445999999999999999999999999998763
No 247
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=99.96 E-value=2.9e-29 Score=283.02 Aligned_cols=211 Identities=18% Similarity=0.176 Sum_probs=155.5
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..+|..++..+.|++++..+..+.... ...|+||||.+++|.+++......+++.+++.|+.||+.||.|||++|||
T Consensus 49 ~~~E~~il~~L~~~~~i~~i~~~~~~~---~~~~lvme~~g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIv 125 (483)
T 3sv0_A 49 LLYESKIYRILQGGTGIPNVRWFGVEG---DYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFL 125 (483)
T ss_dssp HHHHHHHHHHTTTSTTCCCEEEEEEET---TEEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHHHhcCCCCCCeEEEEEeeC---CEEEEEEECCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCEe
Confidence 346777888888877666665344333 36799999999999999975556699999999999999999999999999
Q ss_pred eccCCCCcEEE---ccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004998 144 VHNVRPSCFVM---SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 144 HrDLKP~NILl---~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||||||+|||| +.++.+||+|||+++.......... .
T Consensus 126 HrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~------------------------------~---------- 165 (483)
T 3sv0_A 126 HRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQH------------------------------I---------- 165 (483)
T ss_dssp CCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCB------------------------------C----------
T ss_pred ecccCcceEEEecCCCCCeEEEEeCCcceeccCCccccc------------------------------c----------
Confidence 99999999999 5889999999998854322110000 0
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhh
Q 004998 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
. ........||+.|+|||++.+..++.++|||||||+
T Consensus 166 ------------------------------------------~-~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvi 202 (483)
T 3sv0_A 166 ------------------------------------------P-YRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYV 202 (483)
T ss_dssp ------------------------------------------C-CCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHH
T ss_pred ------------------------------------------c-cccccccCCCccccCHHHhcCCCCChHHHHHHHHHH
Confidence 0 000012578999999999999999999999999999
Q ss_pred hhhccc---cCCCCch--HHHHHHHhhcC---CCCccccccCch-HHHHHHHcCCCCCCCCCChHHHHc
Q 004998 301 LFELFC---PFSTGEE--KTRTMSSLRHR---VLPPQLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 301 l~eLlt---pf~~~~~--~~~~~~~l~~~---~~p~~~~~~~p~-~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
||||++ ||..... ....+..+... ...+.+...+|. ..+|+.+||+.+|.+||++.+|++
T Consensus 203 l~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~ 271 (483)
T 3sv0_A 203 LMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKR 271 (483)
T ss_dssp HHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCHHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred HHHHHhCCCCCccccchhHHHHHHHHhhccccccHHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 999999 6765321 22222222211 111222234444 459999999999999999998875
No 248
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.96 E-value=6.1e-30 Score=301.13 Aligned_cols=198 Identities=18% Similarity=0.209 Sum_probs=148.3
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCC-cEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAID-PFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~-~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+..+|..+|.+++|||||++++.+........ .+|+|||| .|++|.+++.. .+++.+++.|+.||+.||.|||++
T Consensus 125 ~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~~lv~E~~~g~~L~~~~~~---~l~~~~~~~~~~qi~~aL~~lH~~ 201 (681)
T 2pzi_A 125 MAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQ---KLPVAEAIAYLLEILPALSYLHSI 201 (681)
T ss_dssp HHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEEEEEEECCCCEECC----C---CCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCceeEEEEEeCCCCcHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHC
Confidence 34478889999999999999994443332222 26999999 89999998844 499999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004998 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
|||||||||+|||++.+ .+||+|||+++..+..
T Consensus 202 giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~~---------------------------------------------- 234 (681)
T 2pzi_A 202 GLVYNDLKPENIMLTEE-QLKLIDLGAVSRINSF---------------------------------------------- 234 (681)
T ss_dssp TEECCCCSGGGEEECSS-CEEECCCTTCEETTCC----------------------------------------------
T ss_pred CCeecccChHHeEEeCC-cEEEEecccchhcccC----------------------------------------------
Confidence 99999999999999874 8999988877322100
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhh
Q 004998 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
....||+.|+|||++.+. ++.++|||||||+
T Consensus 235 ------------------------------------------------~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~ 265 (681)
T 2pzi_A 235 ------------------------------------------------GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRT 265 (681)
T ss_dssp ------------------------------------------------SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHH
T ss_pred ------------------------------------------------CccCCCccccCHHHHcCC-CCCceehhhhHHH
Confidence 014689999999999776 4899999999999
Q ss_pred hhhccccCCCCchHHHHHHHhhcCCCC-ccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccC
Q 004998 301 LFELFCPFSTGEEKTRTMSSLRHRVLP-PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLN 365 (720)
Q Consensus 301 l~eLltpf~~~~~~~~~~~~l~~~~~p-~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~ 365 (720)
+|+|++++.+.... ....... .......+...+||.+||++||.+||+..+.+.|+|+.
T Consensus 266 l~~l~~g~~~~~~~------~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~ 325 (681)
T 2pzi_A 266 LAALTLDLPTRNGR------YVDGLPEDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTG 325 (681)
T ss_dssp HHHHHSCCCEETTE------ECSSCCTTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred HHHHHhCCCCCccc------ccccccccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHH
Confidence 99999965443221 0111111 11112234556999999999999999988888877653
No 249
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.95 E-value=4.1e-29 Score=268.42 Aligned_cols=170 Identities=12% Similarity=0.085 Sum_probs=124.3
Q ss_pred CCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH-HcCceeccCCCCcEEEccCC------------
Q 004998 93 IDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAH-SQGIVVHNVRPSCFVMSSFN------------ 158 (720)
Q Consensus 93 ~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLH-s~gIvHrDLKP~NILl~~~~------------ 158 (720)
...+|+|||| .+|+|.+.+.+ ..+++.+++.|+.||+.||.||| ++|||||||||+|||++.++
T Consensus 134 ~~~~~lv~E~~~~g~ll~~~~~--~~~~~~~~~~i~~qi~~aL~~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~ 211 (336)
T 2vuw_A 134 DDQLFIVLEFEFGGIDLEQMRT--KLSSLATAKSILHQLTASLAVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKS 211 (336)
T ss_dssp TTCEEEEEEEECCCEETGGGTT--TCCCHHHHHHHHHHHHHHHHHHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEE
T ss_pred cCeEEEEEEecCCCccHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHhCCEeECCCCHHHEEEeccCCcceeeeccCcc
Confidence 3478999999 78876666633 34899999999999999999999 99999999999999999877
Q ss_pred --------ceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccCCC
Q 004998 159 --------HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSS 230 (720)
Q Consensus 159 --------~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~ 230 (720)
.+||+|||+++.. ..
T Consensus 212 ~~~~~~~~~vkL~DFG~a~~~---------------------------------------------~~------------ 234 (336)
T 2vuw_A 212 STIPSCGLQVSIIDYTLSRLE---------------------------------------------RD------------ 234 (336)
T ss_dssp EEEECTTEEEEECCCTTCBEE---------------------------------------------ET------------
T ss_pred ccccCCCceEEEeeccccEec---------------------------------------------CC------------
Confidence 6777666655211 00
Q ss_pred ccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhh-hhhccccCC
Q 004998 231 AYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL-LFELFCPFS 309 (720)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl-l~eLltpf~ 309 (720)
...+||+.|+|||++.+.. +.++||||||++ .+++++++.
T Consensus 235 --------------------------------------~~~~gt~~y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~ 275 (336)
T 2vuw_A 235 --------------------------------------GIVVFCDVSMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYH 275 (336)
T ss_dssp --------------------------------------TEEECCCCTTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCC
T ss_pred --------------------------------------CcEEEeecccChhhhcCCC-ccceehhhhhCCCCcccccccC
Confidence 0137899999999999876 899999998777 777877555
Q ss_pred CCchH---HHHHHHhh-cCC----CCccccccC-chHHHHHHHcCCCCCCCCCChHHHH-cCcccC
Q 004998 310 TGEEK---TRTMSSLR-HRV----LPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELL-QSEFLN 365 (720)
Q Consensus 310 ~~~~~---~~~~~~l~-~~~----~p~~~~~~~-p~~~~li~~~L~~dP~~Rpta~eiL-~hp~~~ 365 (720)
+.... ......+. ... .++.....+ +...+||.+||++| |+.|+| +||||+
T Consensus 276 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~d-----sa~e~l~~Hp~f~ 336 (336)
T 2vuw_A 276 PYSNVLWLHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEFHRTMLNFS-----SATDLLCQHSLFK 336 (336)
T ss_dssp THHHHHHHHHHHHHHHHTCCCSSCCCSHHHHHHHHHHHHHHHHGGGSS-----SHHHHHHHCGGGC
T ss_pred CCcchhhhhHHHHhhhhhhccCcccchhhhhhcCHHHHHHHHHHhccC-----CHHHHHhcCCCcC
Confidence 54331 11222222 111 112222223 34459999999977 999999 999995
No 250
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=99.94 E-value=1e-27 Score=252.26 Aligned_cols=173 Identities=17% Similarity=0.167 Sum_probs=132.3
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++.+++||||+++++ ++.... .+|+|||| .|++|.++++. + ....++..|+.||+.||.|||++|
T Consensus 77 ~~~~e~~~l~~l~hp~iv~~~~-~~~~~~---~~~lv~e~~~g~~L~~~l~~-~--~~~~~~~~i~~ql~~aL~~lH~~g 149 (286)
T 3uqc_A 77 ETLSRTLRLSRIDKPGVARVLD-VVHTRA---GGLVVAEWIRGGSLQEVADT-S--PSPVGAIRAMQSLAAAADAAHRAG 149 (286)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEE-EEEETT---EEEEEEECCCEEEHHHHHTT-C--CCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhcCCCCCcceeeE-EEEECC---cEEEEEEecCCCCHHHHHhc-C--CChHHHHHHHHHHHHHHHHHHHCC
Confidence 3447777899999999999999 554443 58999999 88999999943 2 466688999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.+|.+||+
T Consensus 150 ivH~Dikp~NIll~~~g~~kl~---------------------------------------------------------- 171 (286)
T 3uqc_A 150 VALSIDHPSRVRVSIDGDVVLA---------------------------------------------------------- 171 (286)
T ss_dssp CCCCCCSGGGEEEETTSCEEEC----------------------------------------------------------
T ss_pred CccCCCCcccEEEcCCCCEEEE----------------------------------------------------------
Confidence 9999999999999999999883
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
++.|++| ++.++|||||||++
T Consensus 172 ----------------------------------------------------~~~~~~~-------~~~~~Di~slG~il 192 (286)
T 3uqc_A 172 ----------------------------------------------------YPATMPD-------ANPQDDIRGIGASL 192 (286)
T ss_dssp ----------------------------------------------------SCCCCTT-------CCHHHHHHHHHHHH
T ss_pred ----------------------------------------------------eccccCC-------CCchhHHHHHHHHH
Confidence 2234443 78999999999999
Q ss_pred hhccc---cCCCCchHHHH---HHHhhcCCCC-ccccccCch-HHHHHHHcCCCCCCCCCChHHHHc
Q 004998 302 FELFC---PFSTGEEKTRT---MSSLRHRVLP-PQLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~---~~~l~~~~~p-~~~~~~~p~-~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||......... ...+.....+ ..+....|. ..+||.+||++||.+| |+.|+++
T Consensus 193 ~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~ 258 (286)
T 3uqc_A 193 YALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLN 258 (286)
T ss_dssp HHHHHSEECSCCCSBCCCSEECCBCTTSCBCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHH
T ss_pred HHHHHCCCCCCcCCcchhhHHHHHHhccCCCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHH
Confidence 99999 77764332100 0111111111 122234444 4599999999999999 9999986
No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.92 E-value=1.4e-26 Score=266.35 Aligned_cols=189 Identities=16% Similarity=0.095 Sum_probs=125.6
Q ss_pred eehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 65 HSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 65 ~~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
.+|+.+|.++ .|+||+++++ +++++. .+|||||| .|++|.++|.+.+ ++++. .|+.||+.||+|||++||
T Consensus 289 ~~E~~~l~~~~~~~~i~~~~~-~~ed~~---~~yLVMEyv~G~~L~d~i~~~~-~l~~~---~I~~QIl~AL~ylH~~GI 360 (569)
T 4azs_A 289 HNEIKFLTQPPAGFDAPAVLA-HGENAQ---SGWLVMEKLPGRLLSDMLAAGE-EIDRE---KILGSLLRSLAALEKQGF 360 (569)
T ss_dssp HHHHHHHHSCCTTCCCCCEEE-EEECSS---EEEEEEECCCSEEHHHHHHTTC-CCCHH---HHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhcCCCCCeeEEEE-EEEECC---EEEEEEecCCCCcHHHHHHhCC-CCCHH---HHHHHHHHHHHHHHHCCc
Confidence 3788899998 7999999999 666654 67999999 9999999996654 47764 488999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
|||||||+||||+.+|++||+|||+++....+..
T Consensus 361 IHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~~---------------------------------------------- 394 (569)
T 4azs_A 361 WHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCS---------------------------------------------- 394 (569)
T ss_dssp EESCCCGGGEEECTTSCEEECCCTTEESCC---C----------------------------------------------
T ss_pred eeccCchHhEEECCCCCEEEeecccCeeCCCCCc----------------------------------------------
Confidence 9999999999999999999998888754321100
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
.....+||+.|||||++.+. +..++|+||+|++++
T Consensus 395 --------------------------------------------~~~t~vGTp~YmAPE~l~g~-~~~~~d~~s~g~~~~ 429 (569)
T 4azs_A 395 --------------------------------------------WPTNLVQSFFVFVNELFAEN-KSWNGFWRSAPVHPF 429 (569)
T ss_dssp --------------------------------------------CSHHHHHHHHHHHHHHC------------------C
T ss_pred --------------------------------------------cccCceechhhccHHHhCCC-CCCcccccccccchh
Confidence 00125799999999999875 678899999999999
Q ss_pred hccccCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004998 303 ELFCPFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 303 eLltpf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
+|.+++... ...+.. .++.. .....+...++..+|..||.......++|.
T Consensus 430 ~l~~~~~~~------~~~l~~--~~~~~----~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~ 479 (569)
T 4azs_A 430 NLPQPWSNW------LYAVWQ--EPVER----WNFVLLLALFEKKAKLPSAEQQRGATEQWI 479 (569)
T ss_dssp CCCTTHHHH------HHHHHT--SCGGG----CSHHHHHHHHHTGGGSCCGGGSSCCHHHHH
T ss_pred hhccccchh------HHHhhc--CCCCC----CcHHHHHHHHhCCCCCCCCChhhhccchhH
Confidence 998743221 111111 11111 123466677778888888776655555543
No 252
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.72 E-value=3.5e-19 Score=203.48 Aligned_cols=93 Identities=13% Similarity=0.097 Sum_probs=77.9
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..+|.+++||||+++.. ++.... ..|+|||| .|++|.+++.. ++.|+.||+.||.|||++||
T Consensus 386 ~~~E~~il~~l~h~nIv~~~~-~~~~~~---~~~lVmE~~~ggsL~~~l~~---------~~~i~~qi~~aL~~LH~~gI 452 (540)
T 3en9_A 386 TAREARYLALVKDFGIPAPYI-FDVDLD---NKRIMMSYINGKLAKDVIED---------NLDIAYKIGEIVGKLHKNDV 452 (540)
T ss_dssp HHHHHHHHHHGGGGTCCCCCE-EEEETT---TTEEEEECCCSEEHHHHSTT---------CTHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHhcCCCCcCceEE-EEEeCC---ccEEEEECCCCCCHHHHHHH---------HHHHHHHHHHHHHHHHHCcC
Confidence 358888999999999994433 112222 35999999 78999999954 56899999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCC
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDS 171 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~ 171 (720)
+||||||+|||++. .+||+|||+++..
T Consensus 453 iHrDiKp~NILl~~--~~kL~DFGla~~~ 479 (540)
T 3en9_A 453 IHNDLTTSNFIFDK--DLYIIDFGLGKIS 479 (540)
T ss_dssp ECTTCCTTSEEESS--SEEECCCTTCEEC
T ss_pred ccCCCCHHHEEECC--eEEEEECccCEEC
Confidence 99999999999998 9999999988543
No 253
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.58 E-value=7.3e-15 Score=158.09 Aligned_cols=127 Identities=10% Similarity=0.038 Sum_probs=99.3
Q ss_pred hhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCE
Q 004998 581 EGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKL 659 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i 659 (720)
++..++|...+-+.+..++. .+.+|.+.|++|+|+|||++|||||.|++|+|||+.+. .++..+ .|.+.|
T Consensus 102 dg~v~lWd~~~~~~~~~~~~-~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~--------~~~~~~~~h~~~V 172 (344)
T 4gqb_B 102 SGAVELWELDENETLIVSKF-CKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQ--------VVLSSYRAHAAQV 172 (344)
T ss_dssp TSEEEEEEECTTSSCEEEEE-EEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT--------EEEEEECCCSSCE
T ss_pred CCEEEEEeccCCCceeEeec-cccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCC--------cEEEEEcCcCCce
Confidence 33445554443333322221 23478999999999999999999999999999998876 245444 457889
Q ss_pred EEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE---------EEEEeecCC-ceEEEecCccceE
Q 004998 660 SSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA---------LYCIVLNKL-LIIFRYGMFQEVK 716 (720)
Q Consensus 660 ~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~---------v~~v~~~~~-~~~~~~~~~~~~~ 716 (720)
.+++|+|++..+|||++.|++|+|||+++++++.+ +.+++|++. +.++++|+.|..-
T Consensus 173 ~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v 239 (344)
T 4gqb_B 173 TCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTV 239 (344)
T ss_dssp EEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEE
T ss_pred EEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcE
Confidence 99999998888999999999999999999998775 789999985 5678899887643
No 254
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.58 E-value=1.3e-14 Score=154.10 Aligned_cols=121 Identities=14% Similarity=0.124 Sum_probs=101.3
Q ss_pred hhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEE
Q 004998 582 GLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLS 660 (720)
Q Consensus 582 ~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~ 660 (720)
+..+++...+.+++.+++ +|...|.+++|+|||++|||||.|++|+|||+++. ..+..+ .|...|.
T Consensus 186 g~i~iwd~~~~~~~~~~~-----~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~--------~~~~~~~~h~~~v~ 252 (321)
T 3ow8_A 186 GIINIFDIATGKLLHTLE-----GHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHA--------NLAGTLSGHASWVL 252 (321)
T ss_dssp SCEEEEETTTTEEEEEEC-----CCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTC--------CEEEEECCCSSCEE
T ss_pred CeEEEEECCCCcEEEEEc-----ccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCc--------ceeEEEcCCCCceE
Confidence 345666666667776665 45889999999999999999999999999998765 233344 3577899
Q ss_pred EEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceE
Q 004998 661 SICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 661 ~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
+|+|+|+ +.+|||++.|++|+|||+.+++++.+ |++++|++.+..+++++.|..-
T Consensus 253 ~~~~sp~-~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i 314 (321)
T 3ow8_A 253 NVAFCPD-DTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEI 314 (321)
T ss_dssp EEEECTT-SSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCCE
T ss_pred EEEECCC-CCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeE
Confidence 9999996 46999999999999999999999987 8999999999999999988643
No 255
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.57 E-value=1.6e-14 Score=151.91 Aligned_cols=104 Identities=10% Similarity=0.017 Sum_probs=90.9
Q ss_pred CCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCEEEEEEecCCCCEEEEEeCCCcEE
Q 004998 604 LNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFEGVVQ 682 (720)
Q Consensus 604 ~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~v~~~~~~~~~laS~s~D~~v~ 682 (720)
.+|.+.|.+|+|+|||++||||+.|++|+|||+.+.. ++..+. +...|.+++|+|+ +++||||+.|++|+
T Consensus 10 ~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~--------~~~~~~~~~~~v~~~~~~~~-~~~l~s~s~d~~i~ 80 (304)
T 2ynn_A 10 SNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQV--------EVRSIQVTETPVRAGKFIAR-KNWIIVGSDDFRIR 80 (304)
T ss_dssp EEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTE--------EEEEEECCSSCEEEEEEEGG-GTEEEEEETTSEEE
T ss_pred cCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCc--------eeEEeeccCCcEEEEEEeCC-CCEEEEECCCCEEE
Confidence 3468999999999999999999999999999987752 344443 4678999999995 57999999999999
Q ss_pred EEECCCCcEEEE-------EEEEeecCCceEEEecCccceE
Q 004998 683 VGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 683 lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
|||+.+|+++.+ |++++|+|.+..+++|+.|..-
T Consensus 81 vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v 121 (304)
T 2ynn_A 81 VFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTV 121 (304)
T ss_dssp EEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCE
T ss_pred EEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeE
Confidence 999999999876 8999999999999999998643
No 256
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.55 E-value=2.3e-14 Score=154.24 Aligned_cols=127 Identities=9% Similarity=0.070 Sum_probs=101.3
Q ss_pred chhhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCC-EEEEeeCCCcEEEeeCCcccccccccccceEEe---
Q 004998 578 PFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGE-LFAAAGVNKKIKVFECDAIINENRDIHYPVVEM--- 653 (720)
Q Consensus 578 ~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~-~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~--- 653 (720)
.-.++..++|...+.+++.+++ +|.+.|.+++|+|++. +|||||.|++|+|||+++. .++..+
T Consensus 145 gs~d~~i~iwd~~~~~~~~~~~-----~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~--------~~~~~~~~~ 211 (344)
T 4gqb_B 145 GSKDICIKVWDLAQQVVLSSYR-----AHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCP--------KPASQIGCS 211 (344)
T ss_dssp EETTSCEEEEETTTTEEEEEEC-----CCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSS--------SCEEECC--
T ss_pred EeCCCeEEEEECCCCcEEEEEc-----CcCCceEEEEecCCCCCceeeecccccccccccccc--------ceeeeeecc
Confidence 3445566777777777777664 4689999999999995 7999999999999998876 233333
Q ss_pred cCCCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCc-eEEEecCccceEE
Q 004998 654 ASRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLL-IIFRYGMFQEVKY 717 (720)
Q Consensus 654 ~~~~~i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~-------v~~v~~~~~~-~~~~~~~~~~~~~ 717 (720)
.+...+.+++|+|+++++||+|+.||+|+|||+++++++.+ |++++|+|.+ .++++|+.|..-+
T Consensus 212 ~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~ 283 (344)
T 4gqb_B 212 APGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLA 283 (344)
T ss_dssp --CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEE
T ss_pred eeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEE
Confidence 22456999999998888999999999999999999998876 8999999998 5789999886543
No 257
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.55 E-value=3.6e-14 Score=148.65 Aligned_cols=108 Identities=12% Similarity=0.146 Sum_probs=87.9
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecC-CCCEEEEEeCCCc
Q 004998 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSY-IKSQIASSNFEGV 680 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~v~~~~~-~~~~laS~s~D~~ 680 (720)
+.+|...|.+++|+|||++|||||.|++|+|||+..... .++..+ .|.+.|.+|+|+|. .+++||||+.||+
T Consensus 5 ~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~------~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~ 78 (297)
T 2pm7_B 5 ANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETH------KLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGK 78 (297)
T ss_dssp CCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCB------CCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTE
T ss_pred ccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCc------EEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCE
Confidence 457899999999999999999999999999999864311 234444 45788999999864 3679999999999
Q ss_pred EEEEECCCCc--EEEE-------EEEEeecCC--ceEEEecCccceE
Q 004998 681 VQVGQVLHLI--YFSA-------LYCIVLNKL--LIIFRYGMFQEVK 716 (720)
Q Consensus 681 v~lWDv~tg~--~~~~-------v~~v~~~~~--~~~~~~~~~~~~~ 716 (720)
|+|||+.+++ .+.+ |++++|+|. +..+++|+.|..-
T Consensus 79 v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v 125 (297)
T 2pm7_B 79 VMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKV 125 (297)
T ss_dssp EEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEE
T ss_pred EEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcE
Confidence 9999999874 3332 899999997 7889999888643
No 258
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.54 E-value=4.2e-14 Score=151.16 Aligned_cols=113 Identities=10% Similarity=0.091 Sum_probs=92.1
Q ss_pred CCCCCCCCeEEEEE-----CC-CCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEE
Q 004998 602 DLLNSSNLVCSLSF-----DR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIAS 674 (720)
Q Consensus 602 ~~~~~~~~V~sv~f-----~~-dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~v~~~~~~~~~laS 674 (720)
.|.+|.+.|.+|+| ++ ||++|||||.|++|+|||+........ ...++..+ .|...|++|+|+|+ +.+|||
T Consensus 16 ~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~-~~~~~~~l~~h~~~V~~~~~~~~-~~~l~s 93 (343)
T 2xzm_R 16 ILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGY-FGIPHKALTGHNHFVSDLALSQE-NCFAIS 93 (343)
T ss_dssp EEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSB-SEEEEEEECCCSSCEEEEEECSS-TTEEEE
T ss_pred eeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccc-cccccchhccCCCceEEEEECCC-CCEEEE
Confidence 35567999999999 76 999999999999999999865321110 11244444 45778999999995 569999
Q ss_pred EeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceE
Q 004998 675 SNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 675 ~s~D~~v~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
|+.|++|+|||+++++++.+ |++++|+|.+..+++|+.|..-
T Consensus 94 ~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i 142 (343)
T 2xzm_R 94 SSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREI 142 (343)
T ss_dssp EETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCE
T ss_pred EcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEE
Confidence 99999999999999998876 8999999999999999988643
No 259
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.53 E-value=3.9e-14 Score=150.08 Aligned_cols=110 Identities=12% Similarity=0.120 Sum_probs=92.0
Q ss_pred CCCCCCCCeEEEEECCCC-CEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCCC
Q 004998 602 DLLNSSNLVCSLSFDRDG-ELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEG 679 (720)
Q Consensus 602 ~~~~~~~~V~sv~f~~dg-~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~v~~~~~~~~~laS~s~D~ 679 (720)
.|.+|.+.|.+|+|+|++ ++|||||.|++|+|||+..... ....|+..+ .|...|.+++|+|+ +.+||||+.|+
T Consensus 12 ~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~---~~~~~~~~~~~h~~~v~~~~~s~d-g~~l~s~s~D~ 87 (319)
T 3frx_A 12 TLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQ---KFGVPVRSFKGHSHIVQDCTLTAD-GAYALSASWDK 87 (319)
T ss_dssp EECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETT---EEEEEEEEEECCSSCEEEEEECTT-SSEEEEEETTS
T ss_pred EEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCc---cccccceEEeCCcccEEEEEECCC-CCEEEEEeCCC
Confidence 346679999999999976 8999999999999999754311 111345555 45778999999996 56999999999
Q ss_pred cEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccce
Q 004998 680 VVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 680 ~v~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
+|+|||+.+|+++.+ |++++|++.+..+++|+.|..
T Consensus 88 ~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~ 130 (319)
T 3frx_A 88 TLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKT 130 (319)
T ss_dssp EEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSC
T ss_pred EEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCe
Confidence 999999999998876 899999999999999999864
No 260
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.53 E-value=2.4e-14 Score=157.39 Aligned_cols=122 Identities=15% Similarity=0.178 Sum_probs=100.3
Q ss_pred hhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCC
Q 004998 580 LEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSK 658 (720)
Q Consensus 580 ~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~ 658 (720)
.++..+.|.+.+.+.+.++ .+|...|.+|+|+|+|++|||||.|++|+|||+.+. .++..+ .|...
T Consensus 128 ~Dg~i~vwd~~~~~~~~~l-----~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~--------~~~~~~~~h~~~ 194 (410)
T 1vyh_C 128 EDATIKVWDYETGDFERTL-----KGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF--------ECIRTMHGHDHN 194 (410)
T ss_dssp SSSCEEEEETTTCCCCEEE-----CCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSS--------CEEECCCCCSSC
T ss_pred CCCeEEEEECCCCcEEEEE-----eccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC--------ceeEEEcCCCCC
Confidence 3445566666555555554 456899999999999999999999999999998765 233333 34778
Q ss_pred EEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccce
Q 004998 659 LSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 659 i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
|++|+|+|+ +++|+||+.|++|++||+++|+++.+ |.+++|++.+..+++|+.|..
T Consensus 195 V~~v~~~p~-~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~ 257 (410)
T 1vyh_C 195 VSSVSIMPN-GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQT 257 (410)
T ss_dssp EEEEEECSS-SSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred EEEEEEeCC-CCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCe
Confidence 999999995 56999999999999999999999876 889999999999999998854
No 261
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.53 E-value=3.3e-14 Score=149.47 Aligned_cols=125 Identities=14% Similarity=0.154 Sum_probs=102.1
Q ss_pred chhhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCC
Q 004998 578 PFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASR 656 (720)
Q Consensus 578 ~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~ 656 (720)
.-.++..++|.+.+.+.+..+. +|...|.+++|+|++++||+||.|++|+|||+.+. .++..+ .|.
T Consensus 31 ~~~dg~v~lWd~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~--------~~~~~~~~h~ 97 (304)
T 2ynn_A 31 TLYSGRVELWNYETQVEVRSIQ-----VTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTG--------EKVVDFEAHP 97 (304)
T ss_dssp EETTSEEEEEETTTTEEEEEEE-----CCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTC--------CEEEEEECCS
T ss_pred EcCCCcEEEEECCCCceeEEee-----ccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCC--------cEEEEEeCCC
Confidence 3345567788887777777765 34789999999999999999999999999998876 234333 457
Q ss_pred CCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEE-E-------EEEEeecC-CceEEEecCccceE
Q 004998 657 SKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFS-A-------LYCIVLNK-LLIIFRYGMFQEVK 716 (720)
Q Consensus 657 ~~i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~-~-------v~~v~~~~-~~~~~~~~~~~~~~ 716 (720)
..|.+|+|+|+ +.+||||+.||+|+|||++++..+. . |+|++|+| .+..+++|+.|..-
T Consensus 98 ~~v~~~~~~~~-~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v 165 (304)
T 2ynn_A 98 DYIRSIAVHPT-KPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTV 165 (304)
T ss_dssp SCEEEEEECSS-SSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEE
T ss_pred CcEEEEEEcCC-CCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeE
Confidence 88999999996 5699999999999999999885543 2 89999999 67899999988643
No 262
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.52 E-value=4.9e-14 Score=154.92 Aligned_cols=106 Identities=9% Similarity=0.032 Sum_probs=92.5
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCCCcE
Q 004998 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGVV 681 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~v~~~~~~~~~laS~s~D~~v 681 (720)
+.+|.+.|++++|+|++.+|||||.|++|+|||+.+.. .+..+ .|...|.+|+|+|+ +.+||||+.|++|
T Consensus 104 l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~--------~~~~l~~h~~~V~~v~~~~~-~~~l~sgs~D~~i 174 (410)
T 1vyh_C 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGD--------FERTLKGHTDSVQDISFDHS-GKLLASCSADMTI 174 (410)
T ss_dssp EECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCC--------CCEEECCCSSCEEEEEECTT-SSEEEEEETTSCC
T ss_pred ecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc--------EEEEEeccCCcEEEEEEcCC-CCEEEEEeCCCeE
Confidence 45679999999999999999999999999999988762 33334 45778999999995 5699999999999
Q ss_pred EEEECCCCcEEEE-------EEEEeecCCceEEEecCccceEE
Q 004998 682 QVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 682 ~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
+|||+.+++++.+ |+|++|+|.+..+++|+.|..-+
T Consensus 175 ~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~ 217 (410)
T 1vyh_C 175 KLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIK 217 (410)
T ss_dssp CEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEE
T ss_pred EEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEE
Confidence 9999999999876 99999999999999999987543
No 263
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.52 E-value=2.2e-14 Score=151.72 Aligned_cols=109 Identities=10% Similarity=0.150 Sum_probs=85.5
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecC-CCCEEEEEeCCCc
Q 004998 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSY-IKSQIASSNFEGV 680 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~v~~~~~-~~~~laS~s~D~~ 680 (720)
+.+|.+.|.+|+|+|||++|||||.|++|+|||+.+... .++..+ .|...|.+|+|+|. .+++||||+.|++
T Consensus 9 ~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~------~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~ 82 (316)
T 3bg1_A 9 DTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQ------ILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRK 82 (316)
T ss_dssp -----CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEE------EEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSC
T ss_pred cccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCc------EEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCE
Confidence 457899999999999999999999999999999865410 123333 46789999999863 4679999999999
Q ss_pred EEEEECCCCc--EEEE-------EEEEeecCC--ceEEEecCccceEE
Q 004998 681 VQVGQVLHLI--YFSA-------LYCIVLNKL--LIIFRYGMFQEVKY 717 (720)
Q Consensus 681 v~lWDv~tg~--~~~~-------v~~v~~~~~--~~~~~~~~~~~~~~ 717 (720)
|+|||+++++ ++.+ |++++|+|. +.++++|+.|...+
T Consensus 83 v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~ 130 (316)
T 3bg1_A 83 VIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAIS 130 (316)
T ss_dssp EEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEE
T ss_pred EEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEE
Confidence 9999999884 4433 889999998 78999999886543
No 264
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.52 E-value=1.8e-15 Score=158.46 Aligned_cols=88 Identities=15% Similarity=0.037 Sum_probs=72.3
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..+|.+++ | +++++ ++..+ ..|+|||| .|++|.+ +.. .+...++.||+.||.|||++||
T Consensus 151 ~~~E~~~l~~l~--~-~~v~~-~~~~~----~~~lvmE~~~g~~L~~-l~~-------~~~~~i~~qi~~~l~~lH~~gi 214 (282)
T 1zar_A 151 ARNEFRALQKLQ--G-LAVPK-VYAWE----GNAVLMELIDAKELYR-VRV-------ENPDEVLDMILEEVAKFYHRGI 214 (282)
T ss_dssp HHHHHHHHHHTT--T-SSSCC-EEEEE----TTEEEEECCCCEEGGG-CCC-------SCHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHhcc--C-CCcCe-EEecc----ceEEEEEecCCCcHHH-cch-------hhHHHHHHHHHHHHHHHHHCCC
Confidence 347888999998 5 66666 44332 35999999 8899988 521 2345799999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASC 168 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a 168 (720)
+||||||+|||++ ++.+||+|||++
T Consensus 215 iHrDlkp~NILl~-~~~vkl~DFG~a 239 (282)
T 1zar_A 215 VHGDLSQYNVLVS-EEGIWIIDFPQS 239 (282)
T ss_dssp ECSCCSTTSEEEE-TTEEEECCCTTC
T ss_pred EeCCCCHHHEEEE-CCcEEEEECCCC
Confidence 9999999999999 999999988877
No 265
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.51 E-value=8.2e-14 Score=150.30 Aligned_cols=124 Identities=10% Similarity=0.061 Sum_probs=98.5
Q ss_pred hhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCC-CEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEE
Q 004998 583 LCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDG-ELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLS 660 (720)
Q Consensus 583 l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg-~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~ 660 (720)
..++|...+.+.+..+ .+..|...|.+|+|+|++ .+||+|+.|++|+|||+++. .++..+ .+...|+
T Consensus 205 ~v~~wd~~~~~~~~~~---~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~--------~~~~~~~~~~~~v~ 273 (357)
T 4g56_B 205 RILLWDTRKPKPATRI---DFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNP--------DSAQTSAVHSQNIT 273 (357)
T ss_dssp CEEECCTTSSSCBCBC---CCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCG--------GGCEEECCCSSCEE
T ss_pred ceEEEECCCCceeeee---eeccccccccchhhhhcccceEEEeecccceeEEECCCC--------cEeEEEeccceeEE
Confidence 3445544444433333 233567889999999985 68999999999999998776 234444 3477899
Q ss_pred EEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE------EEEEeecC-CceEEEecCccceEE
Q 004998 661 SICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA------LYCIVLNK-LLIIFRYGMFQEVKY 717 (720)
Q Consensus 661 ~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~------v~~v~~~~-~~~~~~~~~~~~~~~ 717 (720)
+|+|+|+++.+|||++.|++|+|||+.+++++.. |++|+|+| .+..+++|+.|..-+
T Consensus 274 ~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~~H~~~V~~vafsP~d~~~l~s~s~Dg~v~ 337 (357)
T 4g56_B 274 GLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDLSHRDFVTGVAWSPLDHSKFTTVGWDHKVL 337 (357)
T ss_dssp EEEECSSSSCCEEEEETTSCEEEECTTSCEEEEECCCSSCEEEEEECSSSTTEEEEEETTSCEE
T ss_pred EEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEECCCCCCEEEEEEeCCCCCEEEEEcCCCeEE
Confidence 9999998878999999999999999999999886 99999998 789999999986543
No 266
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.51 E-value=1.6e-13 Score=146.60 Aligned_cols=121 Identities=12% Similarity=0.152 Sum_probs=99.3
Q ss_pred hhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCE
Q 004998 581 EGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKL 659 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i 659 (720)
++..++|...+.+.+.++ .+|.+.|.+++|+|+|.+|||||.|++|+|||+++. .++..+ .|...|
T Consensus 163 d~~i~~wd~~~~~~~~~~-----~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~--------~~~~~~~~h~~~v 229 (340)
T 1got_B 163 DTTCALWDIETGQQTTTF-----TGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREG--------MCRQTFTGHESDI 229 (340)
T ss_dssp TSCEEEEETTTTEEEEEE-----CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC--------SEEEEECCCSSCE
T ss_pred CCcEEEEECCCCcEEEEE-----cCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCC--------eeEEEEcCCcCCE
Confidence 344555555555555555 456899999999999999999999999999998765 234444 357789
Q ss_pred EEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE---------EEEEeecCCceEEEecCccce
Q 004998 660 SSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA---------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 660 ~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~---------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
.+|+|+|+ +++||||+.||+|+|||+++++.+.+ |.+++|+|.+..+.+|+-|..
T Consensus 230 ~~v~~~p~-~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~ 293 (340)
T 1got_B 230 NAICFFPN-GNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFN 293 (340)
T ss_dssp EEEEECTT-SSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSE
T ss_pred EEEEEcCC-CCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCe
Confidence 99999996 56999999999999999999988764 789999999999999988754
No 267
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.51 E-value=1.2e-13 Score=147.67 Aligned_cols=122 Identities=10% Similarity=0.113 Sum_probs=97.1
Q ss_pred hhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecC---CCC
Q 004998 582 GLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS---RSK 658 (720)
Q Consensus 582 ~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~---~~~ 658 (720)
+..++|...+.+.+.+ +.+|...|++|+|+|+|.+|||||.|++|+|||+++. .++..+.+ ...
T Consensus 206 ~~v~~wd~~~~~~~~~-----~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~--------~~~~~~~~~~~~~~ 272 (340)
T 1got_B 206 ASAKLWDVREGMCRQT-----FTGHESDINAICFFPNGNAFATGSDDATCRLFDLRAD--------QELMTYSHDNIICG 272 (340)
T ss_dssp SCEEEEETTTCSEEEE-----ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT--------EEEEEECCTTCCSC
T ss_pred CcEEEEECCCCeeEEE-----EcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCC--------cEEEEEccCCcccc
Confidence 3344444444333333 4567899999999999999999999999999998765 13333333 246
Q ss_pred EEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceEE
Q 004998 659 LSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 659 i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
|.+++|+|+ +.+||+|+.||+|+|||+.+++.+.+ |+|++|+|.+..+++|+.|..-+
T Consensus 273 v~~~~~s~~-g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~ 337 (340)
T 1got_B 273 ITSVSFSKS-GRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLK 337 (340)
T ss_dssp EEEEEECTT-SSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEE
T ss_pred eEEEEECCC-CCEEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEE
Confidence 999999995 56999999999999999999998776 89999999999999999997544
No 268
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.50 E-value=1.2e-13 Score=157.18 Aligned_cols=105 Identities=14% Similarity=0.131 Sum_probs=89.7
Q ss_pred CCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCCC
Q 004998 601 GDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEG 679 (720)
Q Consensus 601 ~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~v~~~~~~~~~laS~s~D~ 679 (720)
..|.||.+.|++|+|+|||++|||||.|++|+|||.. . .++..+ .|.+.|.+|+|+|+ +.+|||++.|+
T Consensus 10 ~~L~GH~~~V~~~a~spdg~~las~~~d~~v~iWd~~-~--------~~~~~l~gh~~~V~~l~fspd-g~~las~~~d~ 79 (577)
T 2ymu_A 10 NRLEAHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN-G--------QLLQTLTGHSSSVWGVAFSPD-GQTIASASDDK 79 (577)
T ss_dssp EEECCCSSCEEEEEECTTSSCEEEEETTSEEEEECTT-S--------CEEEEEECCSSCEEEEEECTT-SSEEEEEETTS
T ss_pred eEECCCCCcEEEEEECCCCCEEEEEeCCCEEEEEECC-C--------CEEEEEeCCCCCEEEEEECCC-CCEEEEEeCCC
Confidence 3478899999999999999999999999999999953 2 134444 45788999999996 56999999999
Q ss_pred cEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceE
Q 004998 680 VVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 680 ~v~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
+|+|||+ +|+++.+ |++++|+|.+..+++++.|...
T Consensus 80 ~i~vWd~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~~ 122 (577)
T 2ymu_A 80 TVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTV 122 (577)
T ss_dssp CEEEEET-TSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred EEEEEEC-CCCEEEEEECCCCCEEEEEECCCCCEEEEEcCCCce
Confidence 9999996 6777776 8999999999999999887654
No 269
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.49 E-value=1.5e-13 Score=147.15 Aligned_cols=114 Identities=11% Similarity=0.152 Sum_probs=89.9
Q ss_pred eEEeeeeccCCCCCCCC-CeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEE-ecCCCCEEEEEEecCCC
Q 004998 592 LRVKADLNQGDLLNSSN-LVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVE-MASRSKLSSICWNSYIK 669 (720)
Q Consensus 592 ~~~~~~l~~~~~~~~~~-~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~i~~v~~~~~~~ 669 (720)
++.+.+|+ +|.. .|.+|+|+|||++|||||.|++|+|||+.+.... +.... ..|...|++|+|+|+ +
T Consensus 5 ~~~~~~~~-----~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~-----~~~~~~~~h~~~v~~~~~sp~-g 73 (345)
T 3fm0_A 5 LVLLGRVP-----AHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWI-----CKSVLSEGHQRTVRKVAWSPC-G 73 (345)
T ss_dssp EEEEEEEC-----CSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEE-----EEEEECSSCSSCEEEEEECTT-S
T ss_pred EEEeeeec-----CCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcce-----eeeeeccccCCcEEEEEECCC-C
Confidence 45566665 3455 8999999999999999999999999997654100 11111 245778999999995 5
Q ss_pred CEEEEEeCCCcEEEEECCCCc--EEEE-------EEEEeecCCceEEEecCccceE
Q 004998 670 SQIASSNFEGVVQVGQVLHLI--YFSA-------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 670 ~~laS~s~D~~v~lWDv~tg~--~~~~-------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
++||||+.|++|+|||+.++. ++.+ |++++|+|.+..+++|+.|..-
T Consensus 74 ~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v 129 (345)
T 3fm0_A 74 NYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSV 129 (345)
T ss_dssp SEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred CEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeE
Confidence 699999999999999998874 4443 8999999999999999988643
No 270
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.49 E-value=3.6e-14 Score=155.09 Aligned_cols=109 Identities=9% Similarity=-0.050 Sum_probs=89.4
Q ss_pred CCCCCCCCCeEEEEECC--------CCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEE
Q 004998 601 GDLLNSSNLVCSLSFDR--------DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQI 672 (720)
Q Consensus 601 ~~~~~~~~~V~sv~f~~--------dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~l 672 (720)
+.+.||.+.|++|+|+| ||++|||||.|++|||||+.+.. .......+++.|.+|+|+|+++++|
T Consensus 130 ~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~-------~~~~~~~~~~~v~~v~~~p~~~~~l 202 (393)
T 4gq1_A 130 GGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEG-------PILAGYPLSSPGISVQFRPSNPNQL 202 (393)
T ss_dssp CTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTE-------EEEEEEECSSCEEEEEEETTEEEEE
T ss_pred cccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCc-------eeeeecCCCCCcEEEEECCCCCceE
Confidence 56789999999999998 99999999999999999986541 2234556788999999999877799
Q ss_pred EEEeCCCcEEEEECCCCcEEEE--------------------------------EEEEeec-CCceEEEecCccceE
Q 004998 673 ASSNFEGVVQVGQVLHLIYFSA--------------------------------LYCIVLN-KLLIIFRYGMFQEVK 716 (720)
Q Consensus 673 aS~s~D~~v~lWDv~tg~~~~~--------------------------------v~~v~~~-~~~~~~~~~~~~~~~ 716 (720)
||++.||+|+|||+++++...+ +.++.|+ +.+..+.+++.|..-
T Consensus 203 ~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i 279 (393)
T 4gq1_A 203 IVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAW 279 (393)
T ss_dssp EEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEE
T ss_pred EecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCE
Confidence 9999999999999999876532 4567775 789999999888643
No 271
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.49 E-value=2.3e-13 Score=144.82 Aligned_cols=110 Identities=7% Similarity=0.163 Sum_probs=82.6
Q ss_pred CCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCCCcEEE
Q 004998 605 NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGVVQV 683 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~v~~~~~~~~~laS~s~D~~v~l 683 (720)
+|...|.+|+|+|+|++|||||.|++|+|||+.......... .++..+ .|...|.+|+|+|+ +.+||||+.|++|+|
T Consensus 56 ~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~-~~~~~~~~h~~~V~~v~~sp~-g~~las~s~D~~v~i 133 (330)
T 2hes_X 56 AHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEM-DLLAIIEGHENEVKGVAWSND-GYYLATCSRDKSVWI 133 (330)
T ss_dssp CCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCC-EEEEEEC----CEEEEEECTT-SCEEEEEETTSCEEE
T ss_pred CccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccc-eeEEEEcCCCCcEEEEEECCC-CCEEEEEeCCCEEEE
Confidence 378999999999999999999999999999985431110111 133334 45788999999996 569999999999999
Q ss_pred EECCC-C---cEEEE-------EEEEeecCCceEEEecCccceE
Q 004998 684 GQVLH-L---IYFSA-------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 684 WDv~t-g---~~~~~-------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
||+++ + +++.. |++++|+|.+..+++|+.|..-
T Consensus 134 wd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i 177 (330)
T 2hes_X 134 WETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTV 177 (330)
T ss_dssp EECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCE
T ss_pred EeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeE
Confidence 99943 2 44443 8999999999999999998643
No 272
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.48 E-value=3.2e-13 Score=141.61 Aligned_cols=104 Identities=18% Similarity=0.290 Sum_probs=90.1
Q ss_pred CCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCCCcEE
Q 004998 604 LNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGVVQ 682 (720)
Q Consensus 604 ~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~v~~~~~~~~~laS~s~D~~v~ 682 (720)
.+|...|.+++|+|||++||||+.|++|+|||+.+.. .+..+ .|...|.+++|+|+ +++||+++.|++|+
T Consensus 20 ~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~--------~~~~~~~h~~~v~~~~~~~~-~~~l~s~~~d~~i~ 90 (312)
T 4ery_A 20 AGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK--------FEKTISGHKLGISDVAWSSD-SNLLVSASDDKTLK 90 (312)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC--------EEEEECCCSSCEEEEEECTT-SSEEEEEETTSEEE
T ss_pred cccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcc--------cchhhccCCCceEEEEEcCC-CCEEEEECCCCEEE
Confidence 4568999999999999999999999999999986541 23333 45778999999995 57999999999999
Q ss_pred EEECCCCcEEEE-------EEEEeecCCceEEEecCccceE
Q 004998 683 VGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 683 lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
|||+.+++++.+ |+|++|+|.+..+++|+.|..-
T Consensus 91 vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i 131 (312)
T 4ery_A 91 IWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 131 (312)
T ss_dssp EEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCE
T ss_pred EEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcE
Confidence 999999998876 8899999999999999988643
No 273
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.48 E-value=2.1e-13 Score=144.77 Aligned_cols=103 Identities=11% Similarity=0.197 Sum_probs=90.2
Q ss_pred CCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCEEEEEEecCCCCEEEEEeCCCcEEE
Q 004998 605 NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFEGVVQV 683 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~v~~~~~~~~~laS~s~D~~v~l 683 (720)
.|...|.+++|+|||++||+|+.|++|+|||+++. .++..+. |...|.+|+|+|+ +.+||||+.|++|+|
T Consensus 162 ~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~--------~~~~~~~~h~~~v~~l~~spd-~~~l~s~s~dg~i~i 232 (321)
T 3ow8_A 162 TRGKFILSIAYSPDGKYLASGAIDGIINIFDIATG--------KLLHTLEGHAMPIRSLTFSPD-SQLLVTASDDGYIKI 232 (321)
T ss_dssp CSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT--------EEEEEECCCSSCCCEEEECTT-SCEEEEECTTSCEEE
T ss_pred CCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCC--------cEEEEEcccCCceeEEEEcCC-CCEEEEEcCCCeEEE
Confidence 45788999999999999999999999999998775 2444454 4678999999996 569999999999999
Q ss_pred EECCCCcEEEE-------EEEEeecCCceEEEecCccceE
Q 004998 684 GQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 684 WDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
||+++++++.+ |++++|+|.+..+++|+.|..-
T Consensus 233 wd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v 272 (321)
T 3ow8_A 233 YDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSV 272 (321)
T ss_dssp EETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred EECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcE
Confidence 99999998876 8999999999999999998643
No 274
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.48 E-value=2.2e-13 Score=157.75 Aligned_cols=131 Identities=13% Similarity=0.143 Sum_probs=97.9
Q ss_pred hhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEE
Q 004998 581 EGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLS 660 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~ 660 (720)
+...++|.....+.+.++ .+|...|++|+|+|||++|||||.|++|+|||..++.....-....+....|.+.|.
T Consensus 169 D~~v~lwd~~~~~~~~~l-----~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~ 243 (611)
T 1nr0_A 169 DNTVAIFEGPPFKFKSTF-----GEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVF 243 (611)
T ss_dssp TSCEEEEETTTBEEEEEE-----CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEE
T ss_pred CCeEEEEECCCCeEeeee-----ccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEE
Confidence 334555555555555555 456899999999999999999999999999998765210000000011114678999
Q ss_pred EEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE----------------------------------------------
Q 004998 661 SICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA---------------------------------------------- 694 (720)
Q Consensus 661 ~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~---------------------------------------------- 694 (720)
+|+|+|+ +.+|||++.|++|+|||+.+++++.+
T Consensus 244 ~v~~spd-g~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~g 322 (611)
T 1nr0_A 244 GLTWSPD-GTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYG 322 (611)
T ss_dssp EEEECTT-SSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECC
T ss_pred EEEECCC-CCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcC
Confidence 9999996 56999999999999999998876531
Q ss_pred ----EEEEeecCCceEEEecCccceEE
Q 004998 695 ----LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 695 ----v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
|++++|+|.+..+++|+.|..-+
T Consensus 323 h~~~v~~l~~spdg~~l~s~s~D~~v~ 349 (611)
T 1nr0_A 323 HNKAITALSSSADGKTLFSADAEGHIN 349 (611)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred CCCCEEEEEEeCCCCEEEEEeCCCcEE
Confidence 67899999999999999886543
No 275
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.48 E-value=2.3e-13 Score=144.88 Aligned_cols=108 Identities=14% Similarity=0.219 Sum_probs=84.2
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCCCcE
Q 004998 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGVV 681 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~v~~~~~~~~~laS~s~D~~v 681 (720)
+.+|.+.|.+|+|+|||++|||||.|++|+|||+..... ...++..+ .|...|.+|+|+|+ +.+||||+.|++|
T Consensus 103 ~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~----~~~~~~~~~~h~~~v~~v~~~p~-~~~l~s~s~D~~i 177 (330)
T 2hes_X 103 IEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGE----EYECISVLQEHSQDVKHVIWHPS-EALLASSSYDDTV 177 (330)
T ss_dssp EC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCC----CCEEEEEECCCSSCEEEEEECSS-SSEEEEEETTSCE
T ss_pred EcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCC----CeEEEEEeccCCCceEEEEECCC-CCEEEEEcCCCeE
Confidence 356789999999999999999999999999999853211 01233334 45778999999995 5699999999999
Q ss_pred EEEECCCC--cEEEE-------EEEEeecCC--ceEEEecCccce
Q 004998 682 QVGQVLHL--IYFSA-------LYCIVLNKL--LIIFRYGMFQEV 715 (720)
Q Consensus 682 ~lWDv~tg--~~~~~-------v~~v~~~~~--~~~~~~~~~~~~ 715 (720)
+|||+.++ +++.+ |++++|+|. +..+++|+.|..
T Consensus 178 ~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~ 222 (330)
T 2hes_X 178 RIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDST 222 (330)
T ss_dssp EEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSC
T ss_pred EEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCe
Confidence 99999887 56554 899999998 678899988854
No 276
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.48 E-value=3.6e-13 Score=146.95 Aligned_cols=123 Identities=10% Similarity=0.152 Sum_probs=102.4
Q ss_pred hhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEE
Q 004998 581 EGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLS 660 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~ 660 (720)
++..++|...+.+++..++ +|...|.+++|+|||++|||||.|++|+|||+++. ..+..+.+...|.
T Consensus 144 d~~i~iwd~~~~~~~~~~~-----~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~--------~~~~~~~~~~~v~ 210 (393)
T 1erj_A 144 DRLIRIWDIENRKIVMILQ-----GHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTG--------QCSLTLSIEDGVT 210 (393)
T ss_dssp TSCEEEEETTTTEEEEEEC-----CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT--------EEEEEEECSSCEE
T ss_pred CCeEEEEECCCCcEEEEEc-----cCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCC--------eeEEEEEcCCCcE
Confidence 4455666666666666654 56899999999999999999999999999998775 2344555677899
Q ss_pred EEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE--------------EEEEeecCCceEEEecCccceE
Q 004998 661 SICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA--------------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 661 ~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~--------------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
+++|+|.++.+||+++.||+|+|||+++++.+.. |++++|++.+..+++|+.|..-
T Consensus 211 ~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v 280 (393)
T 1erj_A 211 TVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSV 280 (393)
T ss_dssp EEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred EEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEE
Confidence 9999997778999999999999999999987653 7899999999999999998643
No 277
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.48 E-value=3.2e-13 Score=145.34 Aligned_cols=123 Identities=12% Similarity=0.059 Sum_probs=97.8
Q ss_pred hhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecC---CC
Q 004998 581 EGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS---RS 657 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~---~~ 657 (720)
++..++|...+.+.+..+ .+|.+.|++|+|+|+|.+|||||.|++|+|||+++.. ++..+.. ..
T Consensus 219 Dg~v~~wd~~~~~~~~~~-----~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~--------~~~~~~~~~~~~ 285 (354)
T 2pbi_B 219 DKKAMVWDMRSGQCVQAF-----ETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADR--------EVAIYSKESIIF 285 (354)
T ss_dssp TSCEEEEETTTCCEEEEE-----CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE--------EEEEECCTTCCS
T ss_pred CCeEEEEECCCCcEEEEe-----cCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCc--------EEEEEcCCCccc
Confidence 334445555444444444 4568999999999999999999999999999987641 2222222 34
Q ss_pred CEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceEE
Q 004998 658 KLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 658 ~i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
.+++++|+|+ +.+||+++.|++|+|||+.+|+.+.+ |++++|+|.+..+++|+.|..-+
T Consensus 286 ~~~~~~~s~~-g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~ 351 (354)
T 2pbi_B 286 GASSVDFSLS-GRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLR 351 (354)
T ss_dssp CEEEEEECTT-SSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEE
T ss_pred ceeEEEEeCC-CCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEE
Confidence 6899999995 56999999999999999999998876 89999999999999999997544
No 278
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.48 E-value=1.2e-13 Score=152.80 Aligned_cols=108 Identities=10% Similarity=0.051 Sum_probs=87.0
Q ss_pred CCCCCeEEEEECC-CCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEE
Q 004998 605 NSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQV 683 (720)
Q Consensus 605 ~~~~~V~sv~f~~-dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~v~l 683 (720)
.|...|+||+|+| ++.+|||||.|++|+|||+.+... ...+....|.+.|++|+|+|.++++|+|||.||+|+|
T Consensus 117 ~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~-----~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~i 191 (435)
T 4e54_B 117 PFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDK-----PTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRL 191 (435)
T ss_dssp ECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSC-----CEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEE
T ss_pred CCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCc-----eeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEE
Confidence 4578899999999 567999999999999999876521 1111223568899999999977889999999999999
Q ss_pred EECCCCcEEEE---------EEEEeecCCceEEEecCccceEE
Q 004998 684 GQVLHLIYFSA---------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 684 WDv~tg~~~~~---------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
||++++..... +.+++|++.+.++++|+.|..-+
T Consensus 192 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~ 234 (435)
T 4e54_B 192 QDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVI 234 (435)
T ss_dssp EETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEE
T ss_pred eeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEe
Confidence 99988754322 57899999999999999876443
No 279
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.47 E-value=4.2e-13 Score=140.71 Aligned_cols=121 Identities=12% Similarity=0.148 Sum_probs=98.2
Q ss_pred hhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEE
Q 004998 582 GLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLS 660 (720)
Q Consensus 582 ~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~ 660 (720)
+..++|.....+....+ .+|...|.+++|+|||++||+||.|++|+|||+.+. .++..+ .|...|.
T Consensus 45 g~i~iw~~~~~~~~~~~-----~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~--------~~~~~~~~~~~~v~ 111 (312)
T 4ery_A 45 KLIKIWGAYDGKFEKTI-----SGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSG--------KCLKTLKGHSNYVF 111 (312)
T ss_dssp SCEEEEETTTCCEEEEE-----CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC--------CEEEEEECCSSCEE
T ss_pred CeEEEEeCCCcccchhh-----ccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCC--------cEEEEEcCCCCCEE
Confidence 34445544444444444 456889999999999999999999999999998765 234444 3577899
Q ss_pred EEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceE
Q 004998 661 SICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 661 ~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
+++|+|+ +++|||++.||+|+|||+++++++.+ |.+++|++.+..+.+|+.|..-
T Consensus 112 ~~~~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i 173 (312)
T 4ery_A 112 CCNFNPQ-SNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLC 173 (312)
T ss_dssp EEEECSS-SSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred EEEEcCC-CCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcE
Confidence 9999995 56999999999999999999998876 8999999999999999988643
No 280
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.46 E-value=1.9e-13 Score=145.25 Aligned_cols=107 Identities=9% Similarity=0.013 Sum_probs=78.2
Q ss_pred CCCCCCeEEEEECC---CCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CC---CCEEEEE-------------
Q 004998 604 LNSSNLVCSLSFDR---DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SR---SKLSSIC------------- 663 (720)
Q Consensus 604 ~~~~~~V~sv~f~~---dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~---~~i~~v~------------- 663 (720)
.+|+..|+.++|++ |+++|||||.|++|||||+.++. .+..+. ++ ..|.+++
T Consensus 175 ~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk--------~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~ 246 (356)
T 2w18_A 175 FLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQ--------LLKKMHIDDSYQASVCHKAYSEMGLLFIVLSH 246 (356)
T ss_dssp EECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCC--------EEEEEECCC---CCCEEEEEEETTEEEEEEC-
T ss_pred ccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCc--------EEEEEcCCCcceeeeEEEEECCCCCEEEEecc
Confidence 34588899999998 77999999999999999998762 111111 00 0111111
Q ss_pred ------------------EecCC-------------CC------------EEEEEeCCCcEEEEECCCCcEEEE------
Q 004998 664 ------------------WNSYI-------------KS------------QIASSNFEGVVQVGQVLHLIYFSA------ 694 (720)
Q Consensus 664 ------------------~~~~~-------------~~------------~laS~s~D~~v~lWDv~tg~~~~~------ 694 (720)
|++.. ++ ++||++.|++|||||+.+|+++.+
T Consensus 247 ~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~ 326 (356)
T 2w18_A 247 PCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVKDHCAAAILTSGTIAIWDLLLGQCTALLPPVSD 326 (356)
T ss_dssp -----------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEETTEEEEEETTSCEEEEETTTCSEEEEECCC--
T ss_pred CCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccCCCEEEEEcCCCcEEEEECCCCcEEEEecCCCC
Confidence 33221 11 579999999999999999999987
Q ss_pred -EE-EEeecCCceEEEecCccceEEc
Q 004998 695 -LY-CIVLNKLLIIFRYGMFQEVKYL 718 (720)
Q Consensus 695 -v~-~v~~~~~~~~~~~~~~~~~~~~ 718 (720)
+. +++|+|.+.++++|+.|.--++
T Consensus 327 ~vvs~vafSPDG~~LaSGS~D~TIkl 352 (356)
T 2w18_A 327 QHWSFVKWSGTDSHLLAGQKDGNIFV 352 (356)
T ss_dssp CCCCEEEECSSSSEEEEECTTSCEEE
T ss_pred CeEEEEEECCCCCEEEEEECCCcEEE
Confidence 34 5899999999999999976543
No 281
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.45 E-value=4e-13 Score=143.86 Aligned_cols=106 Identities=12% Similarity=0.127 Sum_probs=88.0
Q ss_pred CCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCCCcEE
Q 004998 604 LNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGVVQ 682 (720)
Q Consensus 604 ~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~v~~~~~~~~~laS~s~D~~v~ 682 (720)
.+|...|.+|+|+|||++|||||.|++|+|||+..... .++..+ .|...|.+|+|+|+ +++||||+.|++|+
T Consensus 58 ~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~------~~~~~~~~h~~~v~~v~~sp~-~~~l~s~s~D~~v~ 130 (345)
T 3fm0_A 58 EGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDF------ECVTTLEGHENEVKSVAWAPS-GNLLATCSRDKSVW 130 (345)
T ss_dssp SSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-E------EEEEEECCCSSCEEEEEECTT-SSEEEEEETTSCEE
T ss_pred cccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCe------EEEEEccCCCCCceEEEEeCC-CCEEEEEECCCeEE
Confidence 46899999999999999999999999999999765411 123334 45788999999995 57999999999999
Q ss_pred EEECCCCcE---EEE-------EEEEeecCCceEEEecCccceE
Q 004998 683 VGQVLHLIY---FSA-------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 683 lWDv~tg~~---~~~-------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
|||+.++.. +.. |.+++|+|.+.++++|+.|...
T Consensus 131 iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i 174 (345)
T 3fm0_A 131 VWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTV 174 (345)
T ss_dssp EEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCE
T ss_pred EEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcE
Confidence 999988743 332 8999999999999999988643
No 282
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.45 E-value=8.7e-13 Score=143.75 Aligned_cols=115 Identities=10% Similarity=0.121 Sum_probs=95.3
Q ss_pred CCCCCCCCeEEEEECC-CCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCCC
Q 004998 602 DLLNSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEG 679 (720)
Q Consensus 602 ~~~~~~~~V~sv~f~~-dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~v~~~~~~~~~laS~s~D~ 679 (720)
.+.+|.+.|.+++|+| ++.+||||+.|++|+|||+.+.... .....++..+ .|...|.+|+|+|++.++|||++.||
T Consensus 76 ~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~-~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg 154 (402)
T 2aq5_A 76 LVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLV-LPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDN 154 (402)
T ss_dssp CBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCS-SCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTS
T ss_pred eEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCc-cccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCC
Confidence 4667899999999999 9999999999999999998765211 1111344444 46788999999998768999999999
Q ss_pred cEEEEECCCCcEEEE---------EEEEeecCCceEEEecCccceEE
Q 004998 680 VVQVGQVLHLIYFSA---------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 680 ~v~lWDv~tg~~~~~---------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
+|+|||+.+++++.+ |++++|++.+..+++|+.|..-+
T Consensus 155 ~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 201 (402)
T 2aq5_A 155 VILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVR 201 (402)
T ss_dssp CEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEE
T ss_pred EEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEE
Confidence 999999999988765 68999999999999999886443
No 283
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.45 E-value=5.9e-13 Score=144.56 Aligned_cols=130 Identities=8% Similarity=0.091 Sum_probs=104.4
Q ss_pred hhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECC-CCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCC
Q 004998 580 LEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRS 657 (720)
Q Consensus 580 ~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~-dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~ 657 (720)
.++.+++|...+.+.+..+...-..+|...|.+++|++ ++.+|||||.|++|+|||++... .++..+ .|.+
T Consensus 178 ~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~-------~~~~~~~~h~~ 250 (380)
T 3iz6_a 178 GDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITS-------RAVRTYHGHEG 250 (380)
T ss_dssp TTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTC-------CCCEEECCCSS
T ss_pred CCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCC-------cceEEECCcCC
Confidence 44566777776666666665434467899999999987 88999999999999999986431 234444 4578
Q ss_pred CEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE--------------EEEEeecCCceEEEecCccceEE
Q 004998 658 KLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA--------------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 658 ~i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~--------------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
.|++|+|+|+ +.+||||+.||+|+|||+++|+++.. |++++|++.+.++..|+-|..-+
T Consensus 251 ~v~~v~~~p~-~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~ 323 (380)
T 3iz6_a 251 DINSVKFFPD-GQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCY 323 (380)
T ss_dssp CCCEEEECTT-SSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEE
T ss_pred CeEEEEEecC-CCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEE
Confidence 8999999995 56999999999999999999998875 57899999999999998775433
No 284
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.44 E-value=6.8e-13 Score=142.78 Aligned_cols=105 Identities=9% Similarity=0.007 Sum_probs=91.6
Q ss_pred CCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecC-CCCEEEEEeCCCcE
Q 004998 604 LNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSY-IKSQIASSNFEGVV 681 (720)
Q Consensus 604 ~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~v~~~~~-~~~~laS~s~D~~v 681 (720)
.+|.+.|.+++|+|++.+|+|||.|++|+|||+.+. .++..+ .|...|.+++|+|. .+++||||+.||+|
T Consensus 151 ~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~--------~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v 222 (354)
T 2pbi_B 151 AMHTNYLSACSFTNSDMQILTASGDGTCALWDVESG--------QLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKA 222 (354)
T ss_dssp EECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTC--------CEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCE
T ss_pred eccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCC--------eEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeE
Confidence 457899999999999999999999999999998776 244444 35778999999985 35799999999999
Q ss_pred EEEECCCCcEEEE-------EEEEeecCCceEEEecCccceE
Q 004998 682 QVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 682 ~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
++||+++++++.+ |++++|+|.+..+++|+.|..-
T Consensus 223 ~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v 264 (354)
T 2pbi_B 223 MVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATC 264 (354)
T ss_dssp EEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred EEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeE
Confidence 9999999999876 8999999999999999988643
No 285
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.44 E-value=4e-13 Score=145.90 Aligned_cols=107 Identities=12% Similarity=0.101 Sum_probs=89.2
Q ss_pred CCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec--------CCCCEEEEEEecCCCCEEE
Q 004998 602 DLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA--------SRSKLSSICWNSYIKSQIA 673 (720)
Q Consensus 602 ~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~--------~~~~i~~v~~~~~~~~~la 673 (720)
.+.+|.+.|++|+|+|||.+|||||.|++|+|||+++.. ++..+. +...|++++|+|+ +.+||
T Consensus 244 ~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~--------~~~~~~~~~~~~~~~~~~v~~~~~s~~-g~~l~ 314 (380)
T 3iz6_a 244 TYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGH--------QLQVYNREPDRNDNELPIVTSVAFSIS-GRLLF 314 (380)
T ss_dssp EECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTE--------EEEEECCCCSSSCCSSCSCSEEEECSS-SSEEE
T ss_pred EECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCc--------EEEEecccccccccccCceEEEEECCC-CCEEE
Confidence 356789999999999999999999999999999998752 122111 1234899999996 56999
Q ss_pred EEeCCCcEEEEECCCCcEEEE-----------EEEEeecCCceEEEecCccceEE
Q 004998 674 SSNFEGVVQVGQVLHLIYFSA-----------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 674 S~s~D~~v~lWDv~tg~~~~~-----------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
+|+.||+|+|||+.+++.+.. |+|++|+|.+..+++|+.|..-.
T Consensus 315 ~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~ 369 (380)
T 3iz6_a 315 AGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLK 369 (380)
T ss_dssp EECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEE
T ss_pred EEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEE
Confidence 999999999999999987754 78999999999999999996543
No 286
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.44 E-value=3.6e-13 Score=145.76 Aligned_cols=109 Identities=6% Similarity=-0.020 Sum_probs=89.3
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCC----cEEEeeCCcccccccccccceEE-ecCCCCEEEEEEecCCCCEEEEEeC
Q 004998 603 LLNSSNLVCSLSFDRDGELFAAAGVNK----KIKVFECDAIINENRDIHYPVVE-MASRSKLSSICWNSYIKSQIASSNF 677 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~----~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~i~~v~~~~~~~~~laS~s~ 677 (720)
..+|...|++|+|+|||+++++|+.|+ +|++||........ ..... ..+...|++|+|+|+ +.+||+|+.
T Consensus 215 ~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~----~~~~~~~~~~~~V~~~~~Spd-g~~lasgs~ 289 (365)
T 4h5i_A 215 DFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSV----LRSKQVTNRFKGITSMDVDMK-GELAVLASN 289 (365)
T ss_dssp CCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEE----EEEEEEESSCSCEEEEEECTT-SCEEEEEET
T ss_pred cCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecc----eeeeeecCCCCCeEeEEECCC-CCceEEEcC
Confidence 345788999999999999999999988 68888865431110 01222 345678999999996 469999999
Q ss_pred CCcEEEEECCCCcEEEE--------EEEEeecCCceEEEecCccceE
Q 004998 678 EGVVQVGQVLHLIYFSA--------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 678 D~~v~lWDv~tg~~~~~--------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
|++|+|||+.+++++.+ |++|+|+|++.++++||.|.--
T Consensus 290 D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tv 336 (365)
T 4h5i_A 290 DNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTI 336 (365)
T ss_dssp TSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEE
T ss_pred CCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeE
Confidence 99999999999999886 8999999999999999999754
No 287
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.44 E-value=7.9e-13 Score=138.32 Aligned_cols=111 Identities=19% Similarity=0.161 Sum_probs=90.2
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecC-CCCEEEEEeCCCc
Q 004998 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSY-IKSQIASSNFEGV 680 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~v~~~~~-~~~~laS~s~D~~ 680 (720)
+.+|.+.|.+|+|+|||++||||+.|++|+|||+.+.... ..++..+ .|...|.+|+|+|. ++++||+++.||+
T Consensus 7 ~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~----~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~ 82 (351)
T 3f3f_A 7 DSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSN----WELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKT 82 (351)
T ss_dssp ECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCC----EEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSC
T ss_pred CcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCc----ceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCe
Confidence 4678999999999999999999999999999998764211 1123333 46788999999995 3679999999999
Q ss_pred EEEEECCCC---------cEEEE-------EEEEeecCC--ceEEEecCccceEE
Q 004998 681 VQVGQVLHL---------IYFSA-------LYCIVLNKL--LIIFRYGMFQEVKY 717 (720)
Q Consensus 681 v~lWDv~tg---------~~~~~-------v~~v~~~~~--~~~~~~~~~~~~~~ 717 (720)
|+|||+.++ +.+.. |++++|++. +..+.+|+.|..-+
T Consensus 83 v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~ 137 (351)
T 3f3f_A 83 VKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILR 137 (351)
T ss_dssp EEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEE
T ss_pred EEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEE
Confidence 999999987 44444 899999999 99999988876433
No 288
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.44 E-value=7.6e-13 Score=139.30 Aligned_cols=121 Identities=9% Similarity=0.154 Sum_probs=99.5
Q ss_pred hhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEE
Q 004998 582 GLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSS 661 (720)
Q Consensus 582 ~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~ 661 (720)
...+++...+.+++..+. +|.+.|.+|+|+|||++|||||.|++|+|||+.+. .++..+.+...|.+
T Consensus 195 ~~i~i~d~~~~~~~~~~~-----~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~--------~~~~~~~~~~~v~~ 261 (340)
T 4aow_A 195 KLVKVWNLANCKLKTNHI-----GHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEG--------KHLYTLDGGDIINA 261 (340)
T ss_dssp SCEEEEETTTTEEEEEEC-----CCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTT--------EEEEEEECSSCEEE
T ss_pred CEEEEEECCCCceeeEec-----CCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccC--------ceeeeecCCceEEe
Confidence 344566666666666664 45889999999999999999999999999998775 35666777788999
Q ss_pred EEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE----------------EEEEeecCCceEEEecCccceEE
Q 004998 662 ICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA----------------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 662 v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~----------------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
++|+|+ + .+++++.|++|+|||++++..+.+ |++++|+|.+.++++|+.|..-+
T Consensus 262 ~~~~~~-~-~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~ 331 (340)
T 4aow_A 262 LCFSPN-R-YWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVR 331 (340)
T ss_dssp EEECSS-S-SEEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEE
T ss_pred eecCCC-C-ceeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEE
Confidence 999995 3 456667799999999999877654 89999999999999999987544
No 289
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.43 E-value=1.5e-12 Score=136.96 Aligned_cols=119 Identities=9% Similarity=0.091 Sum_probs=95.1
Q ss_pred cceEEeeeeccCCCCCCCCCeEEEEECCC-CCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCEEEEEEecC
Q 004998 590 SKLRVKADLNQGDLLNSSNLVCSLSFDRD-GELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSY 667 (720)
Q Consensus 590 ~~~~~~~~l~~~~~~~~~~~V~sv~f~~d-g~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~v~~~~~ 667 (720)
.++++..+| .||.+.|++|+|+|+ +++|||||.|++|||||+.+.... ...|+..+. |...|++++|+|+
T Consensus 26 ~~~~l~~tL-----~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~---~~~~~~~l~~h~~~V~~~~~s~d 97 (340)
T 4aow_A 26 EQMTLRGTL-----KGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETN---YGIPQRALRGHSHFVSDVVISSD 97 (340)
T ss_dssp CEEEEEEEE-----CCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSC---SEEEEEEECCCSSCEEEEEECTT
T ss_pred CceEEEEEE-----CCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcc---cceeeEEEeCCCCCEEEEEECCC
Confidence 445555555 567999999999998 689999999999999998764211 113444444 4788999999995
Q ss_pred CCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceEE
Q 004998 668 IKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 668 ~~~~laS~s~D~~v~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
+.+|||++.|++|++||...+..... +.++.+++.+..+++|+.|....
T Consensus 98 -g~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~ 153 (340)
T 4aow_A 98 -GQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIK 153 (340)
T ss_dssp -SSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEE
T ss_pred -CCEEEEEcccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEE
Confidence 56999999999999999999887765 77889999999999998876543
No 290
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.42 E-value=1.5e-12 Score=137.73 Aligned_cols=124 Identities=9% Similarity=0.029 Sum_probs=100.3
Q ss_pred hhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCE
Q 004998 580 LEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKL 659 (720)
Q Consensus 580 ~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i 659 (720)
.++..++|...+.+.+..+. +|...|.+|+|+|++.+|||||.|++|+|||++.. +......|...|
T Consensus 85 ~D~~v~~wd~~~~~~~~~~~-----~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~--------~~~~~~~h~~~v 151 (319)
T 3frx_A 85 WDKTLRLWDVATGETYQRFV-----GHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQ--------CLATLLGHNDWV 151 (319)
T ss_dssp TTSEEEEEETTTTEEEEEEE-----CCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSC--------EEEEECCCSSCE
T ss_pred CCCEEEEEECCCCCeeEEEc-----cCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC--------eEEEEeccCCcE
Confidence 34456667666666666654 56899999999999999999999999999998543 122233557889
Q ss_pred EEEEEecCC-----CCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceE
Q 004998 660 SSICWNSYI-----KSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 660 ~~v~~~~~~-----~~~laS~s~D~~v~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
.+++|+|.. ..+|+|++.|++|++||+++++...+ |++++|+|.+.++++|+.|..-
T Consensus 152 ~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i 220 (319)
T 3frx_A 152 SQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEI 220 (319)
T ss_dssp EEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEE
T ss_pred EEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeE
Confidence 999999853 34899999999999999999988765 8999999999999999988643
No 291
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.42 E-value=4.1e-13 Score=145.28 Aligned_cols=79 Identities=14% Similarity=0.138 Sum_probs=68.3
Q ss_pred CCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe--cCCCCEEEEEEecCCCCEEEEEeCCC
Q 004998 602 DLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM--ASRSKLSSICWNSYIKSQIASSNFEG 679 (720)
Q Consensus 602 ~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~--~~~~~i~~v~~~~~~~~~laS~s~D~ 679 (720)
.+.+|...|++|+|+|||++||+||.|++|+|||+.++ .++..+ .|...|++|+|+|+ +.+|||||.|+
T Consensus 264 ~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~--------~~~~~~~~gH~~~V~~v~fSpd-g~~laS~S~D~ 334 (365)
T 4h5i_A 264 QVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDL--------SMSKIFKQAHSFAITEVTISPD-STYVASVSAAN 334 (365)
T ss_dssp EEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTT--------EEEEEETTSSSSCEEEEEECTT-SCEEEEEETTS
T ss_pred eecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCC--------cEEEEecCcccCCEEEEEECCC-CCEEEEEeCCC
Confidence 45567899999999999999999999999999998876 355543 35788999999996 46999999999
Q ss_pred cEEEEECCCC
Q 004998 680 VVQVGQVLHL 689 (720)
Q Consensus 680 ~v~lWDv~tg 689 (720)
||||||+.++
T Consensus 335 tvrvw~ip~~ 344 (365)
T 4h5i_A 335 TIHIIKLPLN 344 (365)
T ss_dssp EEEEEECCTT
T ss_pred eEEEEEcCCC
Confidence 9999999754
No 292
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.41 E-value=2.3e-12 Score=140.53 Aligned_cols=100 Identities=11% Similarity=0.158 Sum_probs=86.3
Q ss_pred CCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCCCcEEEEE
Q 004998 607 SNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGVVQVGQ 685 (720)
Q Consensus 607 ~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~v~~~~~~~~~laS~s~D~~v~lWD 685 (720)
...|.+|+|+|||++||||+.|++|+|||+.+. .++..+ .|...|.+++|+|+ +.+|+|++.|++|+|||
T Consensus 123 ~~~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~--------~~~~~~~~h~~~v~~~~~~p~-~~~l~s~s~d~~v~iwd 193 (393)
T 1erj_A 123 DLYIRSVCFSPDGKFLATGAEDRLIRIWDIENR--------KIVMILQGHEQDIYSLDYFPS-GDKLVSGSGDRTVRIWD 193 (393)
T ss_dssp CCBEEEEEECTTSSEEEEEETTSCEEEEETTTT--------EEEEEECCCSSCEEEEEECTT-SSEEEEEETTSEEEEEE
T ss_pred ceeEEEEEECCCCCEEEEEcCCCeEEEEECCCC--------cEEEEEccCCCCEEEEEEcCC-CCEEEEecCCCcEEEEE
Confidence 446999999999999999999999999998765 233344 35778999999996 46999999999999999
Q ss_pred CCCCcEEEE------EEEEeecC-CceEEEecCccce
Q 004998 686 VLHLIYFSA------LYCIVLNK-LLIIFRYGMFQEV 715 (720)
Q Consensus 686 v~tg~~~~~------v~~v~~~~-~~~~~~~~~~~~~ 715 (720)
+++++++.+ +.+++|++ .+..+++|+.|..
T Consensus 194 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~s~d~~ 230 (393)
T 1erj_A 194 LRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRA 230 (393)
T ss_dssp TTTTEEEEEEECSSCEEEEEECSTTCCEEEEEETTSC
T ss_pred CCCCeeEEEEEcCCCcEEEEEECCCCCEEEEEcCCCc
Confidence 999998765 78999999 8999999988764
No 293
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.41 E-value=6.7e-13 Score=143.09 Aligned_cols=128 Identities=13% Similarity=0.048 Sum_probs=101.3
Q ss_pred hhhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCC-EEEEeeCCCcEEEeeCCcccccccccccceEEecCCC
Q 004998 579 FLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGE-LFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRS 657 (720)
Q Consensus 579 ~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~-~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 657 (720)
..++..++|...+.+++..++ +|...|++|+|+|++. +|++++.|++|+|||+++..... .+....+..
T Consensus 158 s~dg~v~iwd~~~~~~~~~~~-----~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~-----~~~~~~~~~ 227 (357)
T 4g56_B 158 GKDFSVKVWDLSQKAVLKSYN-----AHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPAT-----RIDFCASDT 227 (357)
T ss_dssp ETTSCEEEEETTTTEEEEEEC-----CCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBC-----BCCCTTCCS
T ss_pred eCCCeEEEEECCCCcEEEEEc-----CCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceee-----eeeeccccc
Confidence 344556677777777777665 4589999999999986 79999999999999987752110 011112356
Q ss_pred CEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCc-eEEEecCccceE
Q 004998 658 KLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLL-IIFRYGMFQEVK 716 (720)
Q Consensus 658 ~i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~-------v~~v~~~~~~-~~~~~~~~~~~~ 716 (720)
.|.+|+|+|+.+.+||+|+.|++|+|||+++++++.+ |++++|+|.+ .++++|+.|..-
T Consensus 228 ~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i 294 (357)
T 4g56_B 228 IPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTV 294 (357)
T ss_dssp CEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCE
T ss_pred cccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEE
Confidence 7999999998888999999999999999999998876 8999999987 578899887643
No 294
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.41 E-value=1.4e-12 Score=139.27 Aligned_cols=124 Identities=12% Similarity=0.126 Sum_probs=96.1
Q ss_pred hhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe---cCC
Q 004998 580 LEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM---ASR 656 (720)
Q Consensus 580 ~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~---~~~ 656 (720)
.++..++|...+.+.+..+. +|...|.+|+|+|||++|||||.|++|+|||+.... ..... .+.
T Consensus 96 ~D~~v~lwd~~~~~~~~~~~-----~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~--------~~~~~~~~~~~ 162 (343)
T 2xzm_R 96 WDKTLRLWDLRTGTTYKRFV-----GHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGEC--------KFSSAEKENHS 162 (343)
T ss_dssp TTSEEEEEETTSSCEEEEEE-----CCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCE--------EEECCTTTSCS
T ss_pred CCCcEEEEECCCCcEEEEEc-----CCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCc--------eeeeecccCCC
Confidence 34556666666666555553 568999999999999999999999999999986321 11111 346
Q ss_pred CCEEEEEEecCCC---------CEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceEE
Q 004998 657 SKLSSICWNSYIK---------SQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 657 ~~i~~v~~~~~~~---------~~laS~s~D~~v~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
..|.+++|+|+.. .+|||++.||+|+|||. +++.+.+ |++++|+|.+.++++|+.|..-+
T Consensus 163 ~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~ 238 (343)
T 2xzm_R 163 DWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLL 238 (343)
T ss_dssp SCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEE
T ss_pred ceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEE
Confidence 7899999999752 68999999999999994 4555443 89999999999999999886543
No 295
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.40 E-value=2.5e-12 Score=136.42 Aligned_cols=102 Identities=8% Similarity=0.060 Sum_probs=89.5
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCEEEEEEecCCCCEEEEEeCCCcE
Q 004998 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFEGVV 681 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~v~~~~~~~~~laS~s~D~~v 681 (720)
+.+|.+.|.+++|+|||++||+|+.|++|+|||+.+. .++..+. |...|.+++|+|+ +++||+++.||+|
T Consensus 28 l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~--------~~~~~~~~h~~~v~~~~~~~~-~~~l~s~~~dg~i 98 (369)
T 3zwl_B 28 LTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNG--------ERLGTLDGHTGTIWSIDVDCF-TKYCVTGSADYSI 98 (369)
T ss_dssp EECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTC--------CEEEEECCCSSCEEEEEECTT-SSEEEEEETTTEE
T ss_pred EEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCc--------hhhhhhhhcCCcEEEEEEcCC-CCEEEEEeCCCeE
Confidence 3456999999999999999999999999999998765 2444454 5788999999995 5799999999999
Q ss_pred EEEECCCCcEEEE------EEEEeecCCceEEEecCcc
Q 004998 682 QVGQVLHLIYFSA------LYCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 682 ~lWDv~tg~~~~~------v~~v~~~~~~~~~~~~~~~ 713 (720)
+|||+.+++++.. +.+++|++.+..+..+..+
T Consensus 99 ~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~ 136 (369)
T 3zwl_B 99 KLWDVSNGQCVATWKSPVPVKRVEFSPCGNYFLAILDN 136 (369)
T ss_dssp EEEETTTCCEEEEEECSSCEEEEEECTTSSEEEEEECC
T ss_pred EEEECCCCcEEEEeecCCCeEEEEEccCCCEEEEecCC
Confidence 9999999999887 8999999999999988766
No 296
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.40 E-value=2.1e-12 Score=149.54 Aligned_cols=107 Identities=11% Similarity=0.095 Sum_probs=91.2
Q ss_pred CCCCCCCCCeEEEEECCCCC-EEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCC
Q 004998 601 GDLLNSSNLVCSLSFDRDGE-LFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFE 678 (720)
Q Consensus 601 ~~~~~~~~~V~sv~f~~dg~-~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~v~~~~~~~~~laS~s~D 678 (720)
+.+.+|...|++|+|+|++. +|||||.|++|+|||..+. ..+..+ .|...|.+|+|+|+ +.+|||++.|
T Consensus 141 ~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~--------~~~~~l~~H~~~V~~v~fspd-g~~las~s~D 211 (611)
T 1nr0_A 141 GNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPF--------KFKSTFGEHTKFVHSVRYNPD-GSLFASTGGD 211 (611)
T ss_dssp BCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTB--------EEEEEECCCSSCEEEEEECTT-SSEEEEEETT
T ss_pred ceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCC--------eEeeeeccccCceEEEEECCC-CCEEEEEECC
Confidence 45788999999999999997 5999999999999997654 123333 45778999999996 5699999999
Q ss_pred CcEEEEECCCCcEEEE--------------EEEEeecCCceEEEecCccceE
Q 004998 679 GVVQVGQVLHLIYFSA--------------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 679 ~~v~lWDv~tg~~~~~--------------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
++|+|||+.+|+++.+ |++++|+|.+..+++|+.|..-
T Consensus 212 ~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v 263 (611)
T 1nr0_A 212 GTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTI 263 (611)
T ss_dssp SCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred CcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeE
Confidence 9999999999987643 7899999999999999998643
No 297
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.40 E-value=2.6e-12 Score=134.34 Aligned_cols=109 Identities=13% Similarity=0.103 Sum_probs=87.9
Q ss_pred CCCCCCCeEEEEECCC--CCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCC------------
Q 004998 603 LLNSSNLVCSLSFDRD--GELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYI------------ 668 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~d--g~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~------------ 668 (720)
+.+|...|.+|+|+|+ |.+||+|+.|++|+|||+.+.... .+.....|...|.+++|+|+.
T Consensus 95 ~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~-----~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~ 169 (297)
T 2pm7_B 95 HAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTT-----SPIIIDAHAIGVNSASWAPATIEEDGEHNGTKE 169 (297)
T ss_dssp ECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCB-----CCEEEECCSSCEEEEEECCCC------------
T ss_pred eecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCce-----eeeeeecccCccceEeecCCcccccccCCCCCC
Confidence 3467899999999998 899999999999999998754110 122334567789999999963
Q ss_pred CCEEEEEeCCCcEEEEECCCCc----EEEE-------EEEEeecCCc---eEEEecCccceE
Q 004998 669 KSQIASSNFEGVVQVGQVLHLI----YFSA-------LYCIVLNKLL---IIFRYGMFQEVK 716 (720)
Q Consensus 669 ~~~laS~s~D~~v~lWDv~tg~----~~~~-------v~~v~~~~~~---~~~~~~~~~~~~ 716 (720)
+.+||||+.|++|+|||+++++ .+.+ |++|+|+|.+ .++++|+.|..-
T Consensus 170 ~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v 231 (297)
T 2pm7_B 170 SRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTC 231 (297)
T ss_dssp CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCE
T ss_pred cceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcE
Confidence 4689999999999999998876 4433 8999999984 899999988643
No 298
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.39 E-value=1.7e-12 Score=139.71 Aligned_cols=104 Identities=14% Similarity=0.141 Sum_probs=85.4
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCc-EEEeeCCcccccccccccceEEec---CCCCEEEEEEecCCCCEEEEEeCC
Q 004998 603 LLNSSNLVCSLSFDRDGELFAAAGVNKK-IKVFECDAIINENRDIHYPVVEMA---SRSKLSSICWNSYIKSQIASSNFE 678 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~-i~iwd~~~~~~~~~~~~~~~~~~~---~~~~i~~v~~~~~~~~~laS~s~D 678 (720)
+.+|.+.|.+|+|+|||++|||||.|++ |+|||+.+. .++..+. |...|.+|+|+|+ +.+|||++.|
T Consensus 191 ~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~--------~~~~~~~~g~h~~~v~~~~~s~~-~~~l~s~s~d 261 (355)
T 3vu4_A 191 IKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDG--------VLVREFRRGLDRADVVDMKWSTD-GSKLAVVSDK 261 (355)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTC--------CEEEEEECTTCCSCEEEEEECTT-SCEEEEEETT
T ss_pred EEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCC--------cEEEEEEcCCCCCcEEEEEECCC-CCEEEEEECC
Confidence 3567999999999999999999999999 999998876 2444554 6788999999996 5699999999
Q ss_pred CcEEEEECCCCcEEE--E----------------------------EEEEeecCCceEEEecCccce
Q 004998 679 GVVQVGQVLHLIYFS--A----------------------------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 679 ~~v~lWDv~tg~~~~--~----------------------------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
++|+|||+.++.... . ..+++|++.+..++.|.-|-.
T Consensus 262 ~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~ 328 (355)
T 3vu4_A 262 WTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHTRM 328 (355)
T ss_dssp CEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETTTTE
T ss_pred CEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeCCCe
Confidence 999999998663110 0 156899999999998887753
No 299
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.39 E-value=3.4e-12 Score=135.31 Aligned_cols=108 Identities=10% Similarity=0.158 Sum_probs=90.3
Q ss_pred CCCCCCCeEEEEECCC---CCEEEEeeCCCcEEEeeCCcccccccccccc-eEEecCCCCEEEEEEecCCCCEEEEEeCC
Q 004998 603 LLNSSNLVCSLSFDRD---GELFAAAGVNKKIKVFECDAIINENRDIHYP-VVEMASRSKLSSICWNSYIKSQIASSNFE 678 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~d---g~~lat~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~i~~v~~~~~~~~~laS~s~D 678 (720)
+.+|.+.|++|+|+|+ |++||+|+.|++|+|||+.+... .. .....|...|.+|+|+|+ +++||+++.|
T Consensus 35 ~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~------~~~~~~~~h~~~v~~~~~~~~-~~~l~s~~~d 107 (368)
T 3mmy_A 35 TSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQ------TIPKAQQMHTGPVLDVCWSDD-GSKVFTASCD 107 (368)
T ss_dssp SSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSC------EEEEEEEECSSCEEEEEECTT-SSEEEEEETT
T ss_pred ccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCc------eeEEEeccccCCEEEEEECcC-CCEEEEEcCC
Confidence 3567999999999999 69999999999999999876210 11 223346888999999995 5699999999
Q ss_pred CcEEEEECCCCcEEEE------EEEEee--cCCceEEEecCccceEE
Q 004998 679 GVVQVGQVLHLIYFSA------LYCIVL--NKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 679 ~~v~lWDv~tg~~~~~------v~~v~~--~~~~~~~~~~~~~~~~~ 717 (720)
|+|+|||+.+++.+.. |++++| ++.+..+.+|+.|..-+
T Consensus 108 g~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~ 154 (368)
T 3mmy_A 108 KTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLK 154 (368)
T ss_dssp SEEEEEETTTTEEEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEE
T ss_pred CcEEEEEcCCCCceeeccccCceEEEEEEeCCCCCEEEEccCCCcEE
Confidence 9999999999998775 899999 99999999999886543
No 300
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.38 E-value=2.6e-12 Score=136.31 Aligned_cols=126 Identities=7% Similarity=-0.021 Sum_probs=100.9
Q ss_pred hhhhccccceEEeeeeccCCCCCCCCCeEEEEECCC----CCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCC
Q 004998 583 LCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRD----GELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRS 657 (720)
Q Consensus 583 l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~d----g~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~ 657 (720)
-.++|...+.+.+..++......|...|.+++|+|+ |.+||+|+.|++|+|||+.+. .++..+. |..
T Consensus 45 ~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~--------~~~~~~~~~~~ 116 (366)
T 3k26_A 45 RVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITM--------QCIKHYVGHGN 116 (366)
T ss_dssp EEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTC--------CEEEEEESCCS
T ss_pred EEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhc--------eEeeeecCCCC
Confidence 345555555555555552222346788999999999 779999999999999998765 2444444 678
Q ss_pred CEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE----------EEEEeecCCceEEEecCccceE
Q 004998 658 KLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA----------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 658 ~i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~----------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
.|.+++|+|.++++||+++.||+|+|||+++++.+.. |++++|++.+..+++|+.|..-
T Consensus 117 ~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i 185 (366)
T 3k26_A 117 AINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSL 185 (366)
T ss_dssp CEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred cEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCE
Confidence 8999999996678999999999999999999988765 7999999999999999988543
No 301
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.38 E-value=1.7e-12 Score=138.40 Aligned_cols=108 Identities=13% Similarity=0.151 Sum_probs=88.9
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecC-CCCEEEEEeCCCc
Q 004998 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSY-IKSQIASSNFEGV 680 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~v~~~~~-~~~~laS~s~D~~ 680 (720)
+.+|.+.|.+++|+|||++||+|+.|++|+|||+..... .++..+ .|...|++|+|+|+ ++++|||++.||+
T Consensus 7 ~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~------~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~ 80 (379)
T 3jrp_A 7 ANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETH------KLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGK 80 (379)
T ss_dssp EEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEE------EEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSC
T ss_pred ecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcc------eeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCE
Confidence 346799999999999999999999999999999863210 233344 35788999999874 2679999999999
Q ss_pred EEEEECCCCc--EEEE-------EEEEeecCC--ceEEEecCccceE
Q 004998 681 VQVGQVLHLI--YFSA-------LYCIVLNKL--LIIFRYGMFQEVK 716 (720)
Q Consensus 681 v~lWDv~tg~--~~~~-------v~~v~~~~~--~~~~~~~~~~~~~ 716 (720)
|+|||+.+++ .+.. |++++|+|. +..+.+|+.|..-
T Consensus 81 v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i 127 (379)
T 3jrp_A 81 VLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKV 127 (379)
T ss_dssp EEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEE
T ss_pred EEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcE
Confidence 9999999997 4443 899999999 8999999888643
No 302
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.37 E-value=2.2e-12 Score=151.35 Aligned_cols=112 Identities=8% Similarity=0.054 Sum_probs=91.9
Q ss_pred CCCCCCCCCeEEEEECCCC-CEEEEeeCCCcEEEeeCCcccccccccccceE-EecCCCCEEEEEEecCCCCEEEEEeCC
Q 004998 601 GDLLNSSNLVCSLSFDRDG-ELFAAAGVNKKIKVFECDAIINENRDIHYPVV-EMASRSKLSSICWNSYIKSQIASSNFE 678 (720)
Q Consensus 601 ~~~~~~~~~V~sv~f~~dg-~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~-~~~~~~~i~~v~~~~~~~~~laS~s~D 678 (720)
+.+.+|.+.|++|+|+|++ .+|||||.|++|+|||+.+..... ..+.. ...|...|.+|+|+|+ +.+||||+.|
T Consensus 376 ~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~---~~~~~~~~~h~~~v~~v~~s~~-g~~l~sgs~D 451 (694)
T 3dm0_A 376 GTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAY---GVAQRRLTGHSHFVEDVVLSSD-GQFALSGSWD 451 (694)
T ss_dssp EEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCS---CEEEEEEECCSSCEEEEEECTT-SSEEEEEETT
T ss_pred hhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCccc---ccccceecCCCCcEEEEEECCC-CCEEEEEeCC
Confidence 4456779999999999876 799999999999999987541110 01222 3356788999999995 5699999999
Q ss_pred CcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceE
Q 004998 679 GVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 679 ~~v~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
|+|+|||+.+++++.+ |+|++|++.+..+++|+.|..-
T Consensus 452 g~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i 496 (694)
T 3dm0_A 452 GELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTI 496 (694)
T ss_dssp SEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCE
T ss_pred CcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEE
Confidence 9999999999998876 8999999999999999988643
No 303
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.35 E-value=8.6e-13 Score=150.11 Aligned_cols=107 Identities=11% Similarity=0.085 Sum_probs=87.0
Q ss_pred CCCCCCCeEEE--EECCCC-CEEEEeeCCCcEEEeeCCcccccccccccceEEecC-C-CCEEEEEEecCCCCEEEEEeC
Q 004998 603 LLNSSNLVCSL--SFDRDG-ELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS-R-SKLSSICWNSYIKSQIASSNF 677 (720)
Q Consensus 603 ~~~~~~~V~sv--~f~~dg-~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~-~~i~~v~~~~~~~~~laS~s~ 677 (720)
+.+|...|.+| +|+|+| .+|||||.|++|||||+++.. ++.....+ . ..|.+|+|+|++ ..||+++.
T Consensus 304 ~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~-------~~~~~~~~~~~~~v~~v~fsp~~-~~l~s~~~ 375 (524)
T 2j04_B 304 DQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIA-------TTKTTVSRFRGSNLVPVVYCPQI-YSYIYSDG 375 (524)
T ss_dssp EECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHH-------HHCEEEEECSCCSCCCEEEETTT-TEEEEECS
T ss_pred eecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCC-------cccccccccccCcccceEeCCCc-CeEEEeCC
Confidence 34678999999 689998 899999999999999987642 11112222 1 358999999964 58999999
Q ss_pred CCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceEE
Q 004998 678 EGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 678 D~~v~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
|++|+|||+++++++.+ |++|+|+|.+..+++|+.|.--.
T Consensus 376 d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~ 422 (524)
T 2j04_B 376 ASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLI 422 (524)
T ss_dssp SSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEE
T ss_pred CCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEECCCEEE
Confidence 99999999999987654 89999999999999999997544
No 304
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.35 E-value=3.6e-12 Score=145.00 Aligned_cols=104 Identities=14% Similarity=0.182 Sum_probs=88.2
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCCCcE
Q 004998 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGVV 681 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~v~~~~~~~~~laS~s~D~~v 681 (720)
+.+|...|.+++|+|||++||||+.|++|+|||.... ++..+ .|...|++|+|+|+ +.+|||++.||+|
T Consensus 463 ~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~~~---------~~~~~~~h~~~v~~l~~s~d-g~~l~s~~~dg~v 532 (577)
T 2ymu_A 463 LTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQ---------LLQTLTGHSSSVRGVAFSPD-GQTIASASDDKTV 532 (577)
T ss_dssp EECCSSCEEEEEECTTSCEEEEEETTSEEEEEETTSC---------EEEEEECCSSCEEEEEECTT-SSCEEEEETTSEE
T ss_pred EcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCCCC---------EEEEEeCCCCCEEEEEEcCC-CCEEEEEECcCEE
Confidence 4467899999999999999999999999999995322 33333 45788999999996 4699999999999
Q ss_pred EEEECCCCcEEEE-------EEEEeecCCceEEEecCccceEE
Q 004998 682 QVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 682 ~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
+|||. +|+++.+ |++++|+|++..+++|+-|..-.
T Consensus 533 ~lwd~-~~~~~~~~~~h~~~v~~~~fs~dg~~l~s~~~D~~i~ 574 (577)
T 2ymu_A 533 KLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASSDKTVK 574 (577)
T ss_dssp EEECT-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEE
T ss_pred EEEeC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEE
Confidence 99996 7888776 89999999999999999987543
No 305
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.34 E-value=5.8e-12 Score=134.31 Aligned_cols=103 Identities=15% Similarity=-0.018 Sum_probs=85.7
Q ss_pred CCCCCeEEEEECC--CCCEEEEeeCCCcEEEeeCCcccccccccccceEEe--cCCCCEEEEEEecCCCCEEEEEeCCCc
Q 004998 605 NSSNLVCSLSFDR--DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM--ASRSKLSSICWNSYIKSQIASSNFEGV 680 (720)
Q Consensus 605 ~~~~~V~sv~f~~--dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~--~~~~~i~~v~~~~~~~~~laS~s~D~~ 680 (720)
+|...|.+++|+| +|++|||||.|++|+|||+.+.. ++... .+...|.+++|+|+ +.+||+|+.||+
T Consensus 123 ~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~--------~~~~~~~~~~~~i~~~~~~pd-g~~lasg~~dg~ 193 (343)
T 3lrv_A 123 DSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDS--------QYIVHSAKSDVEYSSGVLHKD-SLLLALYSPDGI 193 (343)
T ss_dssp CCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSC--------EEEEECCCSSCCCCEEEECTT-SCEEEEECTTSC
T ss_pred CCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCc--------EEEEEecCCCCceEEEEECCC-CCEEEEEcCCCE
Confidence 4568899999999 99999999999999999988652 22222 23557999999995 569999999999
Q ss_pred EEEEECCCCcEE-EE--------EEEEeecCCceEEEecCccceE
Q 004998 681 VQVGQVLHLIYF-SA--------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 681 v~lWDv~tg~~~-~~--------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
|+|||+++++.+ .+ |++++|+|.+..+++|+-+.++
T Consensus 194 i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~~~v~ 238 (343)
T 3lrv_A 194 LDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVECDQTVV 238 (343)
T ss_dssp EEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEESSBEE
T ss_pred EEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEeCCeEE
Confidence 999999999877 33 8999999999999999966554
No 306
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.34 E-value=2.4e-12 Score=142.94 Aligned_cols=110 Identities=15% Similarity=0.186 Sum_probs=87.6
Q ss_pred CCCCeEEEEECCCCCEEE----EeeCCCcEEEeeCCcccccccccccce---EEe-cCCCCEEEEEEecCCCCEEEEEeC
Q 004998 606 SSNLVCSLSFDRDGELFA----AAGVNKKIKVFECDAIINENRDIHYPV---VEM-ASRSKLSSICWNSYIKSQIASSNF 677 (720)
Q Consensus 606 ~~~~V~sv~f~~dg~~la----t~~~d~~i~iwd~~~~~~~~~~~~~~~---~~~-~~~~~i~~v~~~~~~~~~laS~s~ 677 (720)
+...|++|+|+|||++|| ||+.|++|+|||+.+..........++ ..+ .|...|.+|+|+|+.+++|||++.
T Consensus 91 ~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~ 170 (434)
T 2oit_A 91 MKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLA 170 (434)
T ss_dssp CSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEET
T ss_pred CCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEEC
Confidence 367899999999999999 899999999999865421111110122 222 246789999999987789999999
Q ss_pred CCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccce
Q 004998 678 EGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 678 D~~v~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
||+|+|||+++++.+.. |+|++|+|.+..+++|+.|..
T Consensus 171 Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~ 215 (434)
T 2oit_A 171 DGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGT 215 (434)
T ss_dssp TSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSC
T ss_pred CCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCc
Confidence 99999999999977643 899999999999999998743
No 307
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.34 E-value=6.4e-12 Score=136.80 Aligned_cols=120 Identities=12% Similarity=0.089 Sum_probs=95.3
Q ss_pred hhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEE
Q 004998 582 GLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLS 660 (720)
Q Consensus 582 ~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~ 660 (720)
+..++|...+.+.+..+ .+|.+.|.+++|+|||++||||+.|++|+|||+.+.. ++..+ .|...|.
T Consensus 119 g~i~iwd~~~~~~~~~~-----~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~--------~~~~~~~h~~~v~ 185 (420)
T 3vl1_A 119 GDIKVLDSNFNLQREID-----QAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGS--------NPRTLIGHRATVT 185 (420)
T ss_dssp SCEEEECTTSCEEEEET-----TSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC--------CCEEEECCSSCEE
T ss_pred CCEEEEeCCCcceeeec-----ccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCc--------CceEEcCCCCcEE
Confidence 34455555555555544 3568999999999999999999999999999987652 33333 4678899
Q ss_pred EEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEEE----------E---------------------EEeecCCceEEEe
Q 004998 661 SICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSAL----------Y---------------------CIVLNKLLIIFRY 709 (720)
Q Consensus 661 ~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~v----------~---------------------~v~~~~~~~~~~~ 709 (720)
+++|+|+ +.+|||++.||+|+|||+++++++.++ . +++|++.+..+..
T Consensus 186 ~~~~~~~-~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~ 264 (420)
T 3vl1_A 186 DIAIIDR-GRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIA 264 (420)
T ss_dssp EEEEETT-TTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEE
T ss_pred EEEEcCC-CCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEE
Confidence 9999996 569999999999999999999988763 2 3567889999999
Q ss_pred cCccce
Q 004998 710 GMFQEV 715 (720)
Q Consensus 710 ~~~~~~ 715 (720)
|+-|..
T Consensus 265 ~~~dg~ 270 (420)
T 3vl1_A 265 GHVSGV 270 (420)
T ss_dssp EETTSC
T ss_pred EcCCCe
Confidence 887753
No 308
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.34 E-value=9.6e-12 Score=134.12 Aligned_cols=114 Identities=11% Similarity=0.133 Sum_probs=92.6
Q ss_pred cceEEeeeeccCCCCCCCCCeEEEEECCCC-CEEEEeeCCCcEEEeeCCcccccccccccceEE---ecCCCCEEEEEEe
Q 004998 590 SKLRVKADLNQGDLLNSSNLVCSLSFDRDG-ELFAAAGVNKKIKVFECDAIINENRDIHYPVVE---MASRSKLSSICWN 665 (720)
Q Consensus 590 ~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg-~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~---~~~~~~i~~v~~~ 665 (720)
..+++...+ .+|...|.+++|+|+| ++||+|+.|++|+|||+.+.. .... ..|...|.+++|+
T Consensus 61 ~~~~~~~~~-----~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~--------~~~~~~~~~h~~~v~~~~~~ 127 (383)
T 3ei3_B 61 KSYKLHRTA-----SPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQN--------KTSFIQGMGPGDAITGMKFN 127 (383)
T ss_dssp TTCEEEEEE-----CCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTT--------CEEEECCCSTTCBEEEEEEE
T ss_pred cccceEEec-----cCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcc--------cceeeecCCcCCceeEEEeC
Confidence 445566655 4458999999999999 999999999999999987652 1222 2467899999999
Q ss_pred cCCCCEEEEEeCCCcEEEEECCCCcEEEE----------EEEEeecCCceEEEecCccceEE
Q 004998 666 SYIKSQIASSNFEGVVQVGQVLHLIYFSA----------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 666 ~~~~~~laS~s~D~~v~lWDv~tg~~~~~----------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
|+++++||+++.|++|+|||+.++ .+.. |++++|++.+..+++|+.|...+
T Consensus 128 ~~~~~~l~s~~~d~~i~iwd~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 188 (383)
T 3ei3_B 128 QFNTNQLFVSSIRGATTLRDFSGS-VIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLL 188 (383)
T ss_dssp TTEEEEEEEEETTTEEEEEETTSC-EEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEE
T ss_pred CCCCCEEEEEeCCCEEEEEECCCC-ceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEE
Confidence 976789999999999999999964 4432 89999999999999998875443
No 309
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.32 E-value=5.7e-12 Score=136.67 Aligned_cols=128 Identities=10% Similarity=0.087 Sum_probs=106.9
Q ss_pred hhhhhccccceEEeeeec-cCCCCCCCCCeEEEEECCCC-CEEEEeeCCC---cEEEeeCCcccccccccccceEEec--
Q 004998 582 GLCKYLSFSKLRVKADLN-QGDLLNSSNLVCSLSFDRDG-ELFAAAGVNK---KIKVFECDAIINENRDIHYPVVEMA-- 654 (720)
Q Consensus 582 ~l~~~~~~~~~~~~~~l~-~~~~~~~~~~V~sv~f~~dg-~~lat~~~d~---~i~iwd~~~~~~~~~~~~~~~~~~~-- 654 (720)
+..+++...+.+.+..+. ++...+|...|.+++|+|+| .+||+|+.|+ +|+|||+++.. .++..+.
T Consensus 188 g~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~-------~~~~~~~~~ 260 (416)
T 2pm9_A 188 NFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNAN-------TPLQTLNQG 260 (416)
T ss_dssp SCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTT-------SCSBCCCSC
T ss_pred CCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCC-------CCcEEeecC
Confidence 345667777778888887 56667778999999999998 6899999999 99999987642 2333443
Q ss_pred CCCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCc-eEEEecCccceE
Q 004998 655 SRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLL-IIFRYGMFQEVK 716 (720)
Q Consensus 655 ~~~~i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~-------v~~v~~~~~~-~~~~~~~~~~~~ 716 (720)
|...|.+++|+|.++.+||+++.||+|+|||+.+++++.+ |++++|+|.+ ..+++++.|..-
T Consensus 261 ~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i 330 (416)
T 2pm9_A 261 HQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKI 330 (416)
T ss_dssp CSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEE
T ss_pred ccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecCCcE
Confidence 5778999999996678999999999999999999999886 7899999999 899999998654
No 310
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.32 E-value=7.5e-12 Score=141.17 Aligned_cols=100 Identities=15% Similarity=0.135 Sum_probs=80.1
Q ss_pred CCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCC-----CCEEEEEEecCCCCEEEEEeCCC
Q 004998 605 NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASR-----SKLSSICWNSYIKSQIASSNFEG 679 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~-----~~i~~v~~~~~~~~~laS~s~D~ 679 (720)
.|...|.+|+|+|||++||++|.|++|+|||.... +..+.|+ ..|.+|+|||+ +++||+|+.||
T Consensus 83 ~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~~----------l~~l~~~~~~~~~sv~svafSPD-G~~LAsgs~DG 151 (588)
T 2j04_A 83 QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNKM----------LTNLDSKGNLSSRTYHCFEWNPI-ESSIVVGNEDG 151 (588)
T ss_dssp SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTEE----------EEECCCSSCSTTTCEEEEEECSS-SSCEEEEETTS
T ss_pred CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCce----------eeeccCCCccccccEEEEEEcCC-CCEEEEEcCCC
Confidence 34788999999999999999999999999995442 1222222 25999999996 56999999999
Q ss_pred cEEEEECCCCcE-------EE-----------EEEEEeecCCceEEEecCccceEE
Q 004998 680 VVQVGQVLHLIY-------FS-----------ALYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 680 ~v~lWDv~tg~~-------~~-----------~v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
+|+|||+.++.. +. .|++|+|+|.+ ++.++.|..-+
T Consensus 152 tVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVr 205 (588)
T 2j04_A 152 ELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVF 205 (588)
T ss_dssp EEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEE
T ss_pred EEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEE
Confidence 999999999852 22 39999999999 66777777554
No 311
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.32 E-value=6e-12 Score=147.71 Aligned_cols=125 Identities=14% Similarity=0.147 Sum_probs=98.0
Q ss_pred hhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceE--EecCCCC
Q 004998 581 EGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVV--EMASRSK 658 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~--~~~~~~~ 658 (720)
++..++|...+.+.+..+ .+|...|.+|+|+|||.+|||||.|++|+|||....... .+. ...|...
T Consensus 451 Dg~v~vwd~~~~~~~~~~-----~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~------~~~~~~~~h~~~ 519 (694)
T 3dm0_A 451 DGELRLWDLAAGVSTRRF-----VGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKY------TISEGGEGHRDW 519 (694)
T ss_dssp TSEEEEEETTTTEEEEEE-----ECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEE------EECSSTTSCSSC
T ss_pred CCcEEEEECCCCcceeEE-----eCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcce------eeccCCCCCCCc
Confidence 445556665555555544 456899999999999999999999999999997543100 000 0134677
Q ss_pred EEEEEEecCC-CCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceE
Q 004998 659 LSSICWNSYI-KSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 659 i~~v~~~~~~-~~~laS~s~D~~v~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
|+|++|+|+. ...|+|++.|++|+|||+++++++.+ |++++|+|.+..+++|+.|..-
T Consensus 520 v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i 585 (694)
T 3dm0_A 520 VSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVV 585 (694)
T ss_dssp EEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBC
T ss_pred EEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeE
Confidence 9999999975 35899999999999999999998876 8999999999999999988643
No 312
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.31 E-value=7.6e-12 Score=151.54 Aligned_cols=101 Identities=16% Similarity=0.166 Sum_probs=88.1
Q ss_pred CCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEE
Q 004998 605 NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVG 684 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~v~lW 684 (720)
+|.+.|.+|+|+|||++||+|+.|++|+|||.... ..+....+...|.+|+|+| + .+|||++.|++|+||
T Consensus 15 gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~--------~~~~~~~~~~~V~~l~fsp-g-~~L~S~s~D~~v~lW 84 (902)
T 2oaj_A 15 GMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQV--------EVVIKLEDRSAIKEMRFVK-G-IYLVVINAKDTVYVL 84 (902)
T ss_dssp ECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTC--------EEEEECSSCCCEEEEEEET-T-TEEEEEETTCEEEEE
T ss_pred CCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCc--------EEEEEcCCCCCEEEEEEcC-C-CEEEEEECcCeEEEE
Confidence 56899999999999999999999999999997654 1233345677899999999 4 499999999999999
Q ss_pred ECCCCcEEEE------EEEEeecCCceEEEecCccce
Q 004998 685 QVLHLIYFSA------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 685 Dv~tg~~~~~------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
|+.+++++.+ |+|++|+|.+..+.+|+-|..
T Consensus 85 d~~~~~~~~~~~~~~~V~~v~~sp~g~~l~sgs~dg~ 121 (902)
T 2oaj_A 85 SLYSQKVLTTVFVPGKITSIDTDASLDWMLIGLQNGS 121 (902)
T ss_dssp ETTTCSEEEEEECSSCEEEEECCTTCSEEEEEETTSC
T ss_pred ECCCCcEEEEEcCCCCEEEEEECCCCCEEEEEcCCCc
Confidence 9999998876 899999999999999987754
No 313
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.30 E-value=5.4e-12 Score=135.49 Aligned_cols=108 Identities=7% Similarity=0.079 Sum_probs=81.2
Q ss_pred CCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEE-ecCCCCEEEEEEecCCCCEEEEEeCCCc
Q 004998 602 DLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVE-MASRSKLSSICWNSYIKSQIASSNFEGV 680 (720)
Q Consensus 602 ~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~i~~v~~~~~~~~~laS~s~D~~ 680 (720)
.+.+|.+.|.+++|+|||++|||||.|++|+|||+.+.. .. .++.. ..|...|.+++|+|+ +++||+++.|++
T Consensus 50 ~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~----~~-~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~ 123 (377)
T 3dwl_C 50 TFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDG----TW-KQTLVLLRLNRAATFVRWSPN-EDKFAVGSGARV 123 (377)
T ss_dssp CBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC----------CC-CCEEECCCCSSCEEEEECCTT-SSCCEEEESSSC
T ss_pred EEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCC----ce-eeeeEecccCCceEEEEECCC-CCEEEEEecCCe
Confidence 345679999999999999999999999999999987652 00 12333 345788999999995 569999999999
Q ss_pred EEEEECCCCcE---EEE--------EEEEeecCCceEEEecCccce
Q 004998 681 VQVGQVLHLIY---FSA--------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 681 v~lWDv~tg~~---~~~--------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
|+|||+.+++. +.. |++++|+|.+..+++|+.|..
T Consensus 124 i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~ 169 (377)
T 3dwl_C 124 ISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRK 169 (377)
T ss_dssp EEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSC
T ss_pred EEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCE
Confidence 99999998863 332 899999999999999998854
No 314
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.30 E-value=1.2e-11 Score=149.87 Aligned_cols=111 Identities=14% Similarity=0.082 Sum_probs=88.5
Q ss_pred CCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccc-------c---------------cccc---------------c
Q 004998 605 NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIIN-------E---------------NRDI---------------H 647 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~-------~---------------~~~~---------------~ 647 (720)
+|...|.+|+|+|||++||+|+.|++|+|||+.+... . ..+. -
T Consensus 486 ~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 565 (902)
T 2oaj_A 486 AKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGF 565 (902)
T ss_dssp SSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEE
T ss_pred CCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCcc
Confidence 7889999999999999999999999999999875410 0 0000 0
Q ss_pred cceEEec-CCCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------------EEEEeec-----CC---ce
Q 004998 648 YPVVEMA-SRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------------LYCIVLN-----KL---LI 705 (720)
Q Consensus 648 ~~~~~~~-~~~~i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~-------------v~~v~~~-----~~---~~ 705 (720)
.|+..+. |.+.|++|+|+|++ +||+|+.|++|+|||++++..+.. |+||+|+ ++ +.
T Consensus 566 ~~~~~l~~h~~~V~svafSpdG--~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~ 643 (902)
T 2oaj_A 566 MPSTAVHANKGKTSAINNSNIG--FVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSI 643 (902)
T ss_dssp EEEEEECCCSCSEEEEEECBTS--EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEE
T ss_pred ceeEEEEcCCCcEEEEEecCCc--EEEEEeCCCcEEEEECCCCeEEEEeehhHhccccccceEEEEEEEEecCCCCCcce
Confidence 1344443 68899999999964 999999999999999998876531 9999999 77 48
Q ss_pred EEEecCccceEE
Q 004998 706 IFRYGMFQEVKY 717 (720)
Q Consensus 706 ~~~~~~~~~~~~ 717 (720)
.+++|+.|..-+
T Consensus 644 ~l~sgs~D~tv~ 655 (902)
T 2oaj_A 644 LMVCGTDMGEVI 655 (902)
T ss_dssp EEEEEETTSEEE
T ss_pred EEEEEecCCcEE
Confidence 999999886543
No 315
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.30 E-value=5.1e-12 Score=133.48 Aligned_cols=109 Identities=15% Similarity=0.110 Sum_probs=86.5
Q ss_pred CCCCCCCeEEEEECCC-----------------CCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEE
Q 004998 603 LLNSSNLVCSLSFDRD-----------------GELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICW 664 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~d-----------------g~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~v~~ 664 (720)
+.+|...|.+++|+|+ +++|||||.|++|+|||+..... ..++..+ .|...|.+|+|
T Consensus 146 ~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~-----~~~~~~l~~h~~~V~~v~~ 220 (316)
T 3bg1_A 146 NNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQ-----WKEEQKLEAHSDWVRDVAW 220 (316)
T ss_dssp TTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSC-----EEEEECCBCCSSCEEEEEC
T ss_pred eccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCc-----cceeeecccCCCceEEEEe
Confidence 4567889999999998 47999999999999999854210 0123333 35778999999
Q ss_pred ecCC---CCEEEEEeCCCcEEEEECCCC-------cEEEE----EEEEeecCCceEEEecCccceE
Q 004998 665 NSYI---KSQIASSNFEGVVQVGQVLHL-------IYFSA----LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 665 ~~~~---~~~laS~s~D~~v~lWDv~tg-------~~~~~----v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
+|++ ..+|||++.||+|+|||+.++ +.+.. |++++|+|.+..+++|+.|..-
T Consensus 221 sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v 286 (316)
T 3bg1_A 221 APSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKV 286 (316)
T ss_dssp CCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCE
T ss_pred cCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeE
Confidence 9975 369999999999999999862 23433 9999999999999999988644
No 316
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.29 E-value=3.5e-12 Score=145.08 Aligned_cols=105 Identities=11% Similarity=0.108 Sum_probs=85.2
Q ss_pred CCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEE--EEecCCCCEEEEEeCC
Q 004998 602 DLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSI--CWNSYIKSQIASSNFE 678 (720)
Q Consensus 602 ~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~v--~~~~~~~~~laS~s~D 678 (720)
.+.+|...|.||+|++++ +||||+.|++|+|||+++.. .|+..+ .|...|.+| +|+|++.++|||||.|
T Consensus 261 ~l~~h~~~v~sv~~s~~~-~lasgs~DgtV~lWD~~~~~-------~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D 332 (524)
T 2j04_B 261 TLSLADSLITTFDFLSPT-TVVCGFKNGFVAEFDLTDPE-------VPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVD 332 (524)
T ss_dssp EECCTTTCEEEEEESSSS-EEEEEETTSEEEEEETTBCS-------SCSEEEECSSSCEEEEEEECCTTSCCEEEEEETT
T ss_pred EEEcCCCCEEEEEecCCC-eEEEEeCCCEEEEEECCCCC-------CceEEeecccccEEEEEEEcCCCCCeEEEEeccC
Confidence 356788999999999865 89999999999999987641 344433 467889999 4666543799999999
Q ss_pred CcEEEEECCCCcEEEE---------EEEEeecCCceEEEecCccc
Q 004998 679 GVVQVGQVLHLIYFSA---------LYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 679 ~~v~lWDv~tg~~~~~---------v~~v~~~~~~~~~~~~~~~~ 714 (720)
++|||||+++++++.+ |++|+|+|.+..+++|+.|.
T Consensus 333 ~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~ 377 (524)
T 2j04_B 333 GYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGAS 377 (524)
T ss_dssp SEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSS
T ss_pred CeEEEEECCCCCcccccccccccCcccceEeCCCcCeEEEeCCCC
Confidence 9999999998875432 57899999998899888875
No 317
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.29 E-value=5.5e-12 Score=135.42 Aligned_cols=111 Identities=13% Similarity=0.098 Sum_probs=88.5
Q ss_pred CCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCccccccc----------ccccceEEecCCCCEEEEEEecCCCCEEEEE
Q 004998 606 SSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENR----------DIHYPVVEMASRSKLSSICWNSYIKSQIASS 675 (720)
Q Consensus 606 ~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~----------~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~ 675 (720)
|...|.+++|+|||++||+|+.|++|+|||+.+...... ....++..+.|...|.+++|+|+ +.+||++
T Consensus 145 h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~-~~~l~~~ 223 (377)
T 3dwl_C 145 LRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPS-GNALAYA 223 (377)
T ss_dssp CCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTT-SSCEEEE
T ss_pred cCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCC-CCEEEEE
Confidence 789999999999999999999999999999864211000 01123344466788999999996 4699999
Q ss_pred eCCCcEEEEECCCCcE----EEE-------EEEEeecCCceEEEecCccceEE
Q 004998 676 NFEGVVQVGQVLHLIY----FSA-------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 676 s~D~~v~lWDv~tg~~----~~~-------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
+.||+|+|||+.++++ +.+ |++++|++.+.++.+|+-+.+..
T Consensus 224 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~ 276 (377)
T 3dwl_C 224 GHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPIL 276 (377)
T ss_dssp ETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEEE
T ss_pred eCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEEE
Confidence 9999999999999987 433 89999999999999998777653
No 318
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.28 E-value=2.5e-11 Score=130.88 Aligned_cols=104 Identities=10% Similarity=0.118 Sum_probs=88.5
Q ss_pred CCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCCCcEEE
Q 004998 605 NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGVVQV 683 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~v~~~~~~~~~laS~s~D~~v~l 683 (720)
+|...|.+++|+|++++||+|+.|++|+|||++. .++..+ .|...|.+|+|+|++..+|||++.|++|+|
T Consensus 161 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~---------~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~i 231 (383)
T 3ei3_B 161 SWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLDG---------HEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKL 231 (383)
T ss_dssp CSSCCEEEEEEETTTTEEEEEETTSEEEEEETTS---------CEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEE
T ss_pred CCCCCeEEEEECCCCCEEEEECCCCCEEEEECCC---------CEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEE
Confidence 4568899999999999999999999999999842 244444 457889999999976669999999999999
Q ss_pred EECCC----CcEEEE------EEEEeecC-CceEEEecCccceEE
Q 004998 684 GQVLH----LIYFSA------LYCIVLNK-LLIIFRYGMFQEVKY 717 (720)
Q Consensus 684 WDv~t----g~~~~~------v~~v~~~~-~~~~~~~~~~~~~~~ 717 (720)
||+++ +.++.. |++++|+| .+..+++|+.|..-+
T Consensus 232 wd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~ 276 (383)
T 3ei3_B 232 WDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNEIR 276 (383)
T ss_dssp EEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEESSSEEE
T ss_pred EeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcCCCcEE
Confidence 99998 667664 89999999 999999999885443
No 319
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.28 E-value=3.2e-11 Score=131.41 Aligned_cols=105 Identities=12% Similarity=0.273 Sum_probs=90.4
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEe--CCC
Q 004998 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSN--FEG 679 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~v~~~~~~~~~laS~s--~D~ 679 (720)
+.+|.+.|.+++|+|||.+||+|+.|++|+|||+.+. .++..+ .+...|.+++|+|++..+|++++ .|+
T Consensus 213 ~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~--------~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~ 284 (401)
T 4aez_A 213 LQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSS--------IPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDK 284 (401)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCS--------SEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTC
T ss_pred EcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCC--------CccEEecCCcceEEEEEECCCCCCEEEEecCCCCC
Confidence 4457899999999999999999999999999998765 244444 45788999999998888999976 899
Q ss_pred cEEEEECCCCcEEEE------EEEEeecCCceEEEe--cCccce
Q 004998 680 VVQVGQVLHLIYFSA------LYCIVLNKLLIIFRY--GMFQEV 715 (720)
Q Consensus 680 ~v~lWDv~tg~~~~~------v~~v~~~~~~~~~~~--~~~~~~ 715 (720)
+|++||+.+++++.+ +.+++|++.+..+.. |.-|-.
T Consensus 285 ~i~i~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~g~~dg~ 328 (401)
T 4aez_A 285 QIHFWNAATGARVNTVDAGSQVTSLIWSPHSKEIMSTHGFPDNN 328 (401)
T ss_dssp EEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECTTTCE
T ss_pred EEEEEECCCCCEEEEEeCCCcEEEEEECCCCCeEEEEeecCCCc
Confidence 999999999999876 899999999999988 655543
No 320
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.27 E-value=2.9e-11 Score=130.22 Aligned_cols=112 Identities=13% Similarity=0.190 Sum_probs=86.7
Q ss_pred CCCCCCCeEEEEECC-CCCEEEEeeCCCcEEEeeCCcccccccccccceEEe------cCCCCEEEEEEecCCCCEEEEE
Q 004998 603 LLNSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM------ASRSKLSSICWNSYIKSQIASS 675 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~-dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~------~~~~~i~~v~~~~~~~~~laS~ 675 (720)
+.+|.+.|.+++|+| +|++||||+.|++|+|||+.+..........+.... .|...|.+++|+|+++++|+|+
T Consensus 39 ~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~ 118 (408)
T 4a11_B 39 ERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSS 118 (408)
T ss_dssp CCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEE
T ss_pred eeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEE
Confidence 345799999999999 999999999999999999887522111000000111 2677899999999777899999
Q ss_pred eCCCcEEEEECCCCcEEEE------EEEEeecCCce---EEEecCccc
Q 004998 676 NFEGVVQVGQVLHLIYFSA------LYCIVLNKLLI---IFRYGMFQE 714 (720)
Q Consensus 676 s~D~~v~lWDv~tg~~~~~------v~~v~~~~~~~---~~~~~~~~~ 714 (720)
+.||+|++||+.+++.+.. +.++.|++... .+..|..|.
T Consensus 119 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (408)
T 4a11_B 119 SFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGP 166 (408)
T ss_dssp ETTSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSS
T ss_pred eCCCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCC
Confidence 9999999999999998876 77888888544 777776654
No 321
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.27 E-value=1.1e-11 Score=132.23 Aligned_cols=120 Identities=9% Similarity=-0.050 Sum_probs=89.4
Q ss_pred hhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-c-CCC
Q 004998 580 LEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-A-SRS 657 (720)
Q Consensus 580 ~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~-~~~ 657 (720)
.++..++|...+.+.+.... .+|...|.+++|+|||.+||+|+.|++|+|||+++... ....+ . |.+
T Consensus 147 ~dg~i~~wd~~~~~~~~~~~----~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~-------~~~~~~~~h~~ 215 (343)
T 3lrv_A 147 NRGTIGFQSYEDDSQYIVHS----AKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQ-------ASSRFPVDEEA 215 (343)
T ss_dssp TTCCEEEEESSSSCEEEEEC----CCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTS-------CCEECCCCTTS
T ss_pred CCCcEEEEECCCCcEEEEEe----cCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCC-------CccEEeccCCC
Confidence 34445566655555544332 12355799999999999999999999999999987621 11222 2 578
Q ss_pred CEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE----------EE--EEeecCCceEEEecCc
Q 004998 658 KLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA----------LY--CIVLNKLLIIFRYGMF 712 (720)
Q Consensus 658 ~i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~----------v~--~v~~~~~~~~~~~~~~ 712 (720)
.|++|+|+|+ +.+|||++ |++|+|||+++++++.+ +. +++|+|.+.+++.|+-
T Consensus 216 ~v~~l~fs~~-g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~ 280 (343)
T 3lrv_A 216 KIKEVKFADN-GYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSN 280 (343)
T ss_dssp CEEEEEECTT-SSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEET
T ss_pred CEEEEEEeCC-CCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEecC
Confidence 9999999996 56999999 56999999999876532 33 6999999999999654
No 322
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.26 E-value=7.8e-12 Score=138.11 Aligned_cols=102 Identities=8% Similarity=0.064 Sum_probs=85.7
Q ss_pred CCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEE-ecCCCCEEEEEEecCCCCEEEEEeCCCcEEEE
Q 004998 606 SSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVE-MASRSKLSSICWNSYIKSQIASSNFEGVVQVG 684 (720)
Q Consensus 606 ~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~i~~v~~~~~~~~~laS~s~D~~v~lW 684 (720)
+...|++++|+|||.+||+|+.|++|+|||+... ++.. ..|...|.+|+|+|++..+||+|+.|++|+||
T Consensus 208 ~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~---------~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iw 278 (435)
T 4e54_B 208 INIWFCSLDVSASSRMVVTGDNVGNVILLNMDGK---------ELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIW 278 (435)
T ss_dssp CSCCCCCEEEETTTTEEEEECSSSBEEEEESSSC---------BCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEE
T ss_pred CCccEEEEEECCCCCEEEEEeCCCcEeeeccCcc---------eeEEEecccceEEeeeecCCCceEEEEecCcceeeEE
Confidence 3567899999999999999999999999997643 1212 23577899999999888899999999999999
Q ss_pred ECCCCcEEEE----------EEEEeecCCceEEEecCccceE
Q 004998 685 QVLHLIYFSA----------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 685 Dv~tg~~~~~----------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
|+++++.... |++++|+|.+..+++|+.|..-
T Consensus 279 d~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i 320 (435)
T 4e54_B 279 DLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEI 320 (435)
T ss_dssp ETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCE
T ss_pred ecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEE
Confidence 9988764322 8999999999999999988643
No 323
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.26 E-value=3e-11 Score=143.35 Aligned_cols=104 Identities=10% Similarity=0.020 Sum_probs=90.4
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCCCcE
Q 004998 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGVV 681 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~v~~~~~~~~~laS~s~D~~v 681 (720)
+.+|++.|.+++|+|||.+||+|+.|++|+|||+.++ ..+..+ .|.+.|.+++|+|+ +++||+++.||+|
T Consensus 9 ~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~--------~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~dg~i 79 (814)
T 3mkq_A 9 FSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQ--------VEVRSIQVTETPVRAGKFIAR-KNWIIVGSDDFRI 79 (814)
T ss_dssp EEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTT--------EEEEEEECCSSCEEEEEEEGG-GTEEEEEETTSEE
T ss_pred eecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCC--------ceEEEEecCCCcEEEEEEeCC-CCEEEEEeCCCeE
Confidence 3456899999999999999999999999999998775 234444 35788999999995 5699999999999
Q ss_pred EEEECCCCcEEEE-------EEEEeecCCceEEEecCccce
Q 004998 682 QVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 682 ~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
+|||+.+|+.+.+ |++++|+|.+..+.+|+-|..
T Consensus 80 ~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~ 120 (814)
T 3mkq_A 80 RVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLT 120 (814)
T ss_dssp EEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSE
T ss_pred EEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCE
Confidence 9999999998876 899999999999999988754
No 324
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.25 E-value=2.5e-11 Score=129.36 Aligned_cols=104 Identities=13% Similarity=0.157 Sum_probs=87.2
Q ss_pred CCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCCCcEEEE
Q 004998 606 SSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGVVQVG 684 (720)
Q Consensus 606 ~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~v~~~~~~~~~laS~s~D~~v~lW 684 (720)
|.+.|.+++|+|||++||+|+.|++|+|||+.+... .++..+ .|...|.+++|+|+ +++||+++.||+|+||
T Consensus 7 ~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~------~~~~~~~~h~~~v~~~~~~~~-~~~l~~~~~dg~i~vw 79 (372)
T 1k8k_C 7 LVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKW------VQVHELKEHNGQVTGVDWAPD-SNRIVTCGTDRNAYVW 79 (372)
T ss_dssp CSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEE------EEEEEEECCSSCEEEEEEETT-TTEEEEEETTSCEEEE
T ss_pred cCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcE------EeeeeecCCCCcccEEEEeCC-CCEEEEEcCCCeEEEE
Confidence 688999999999999999999999999999765410 133444 45788999999995 5799999999999999
Q ss_pred ECCCCcEEEE---------EEEEeecCCceEEEecCccceE
Q 004998 685 QVLHLIYFSA---------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 685 Dv~tg~~~~~---------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
|+.+++.... |++++|++.+..+++|+.|..-
T Consensus 80 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v 120 (372)
T 1k8k_C 80 TLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVI 120 (372)
T ss_dssp EEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSE
T ss_pred ECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEE
Confidence 9999975443 8999999999999999877543
No 325
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.25 E-value=3.9e-11 Score=130.60 Aligned_cols=103 Identities=17% Similarity=0.170 Sum_probs=87.9
Q ss_pred CCCCCCCeEEEEECCCC-CEEEEeeCCCcEEEeeCCcccccccccccceEEe---cCCCCEEEEEEecCCCCEEEEEeCC
Q 004998 603 LLNSSNLVCSLSFDRDG-ELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM---ASRSKLSSICWNSYIKSQIASSNFE 678 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg-~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~---~~~~~i~~v~~~~~~~~~laS~s~D 678 (720)
+.+|...|.+|+|+|+| .+||||+.|++|+|||+.+. .++..+ .|...|.+++|+|+ +++||+++.|
T Consensus 127 ~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~--------~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d 197 (402)
T 2aq5_A 127 LEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTG--------AAVLTLGPDVHPDTIYSVDWSRD-GALICTSCRD 197 (402)
T ss_dssp EECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTT--------EEEEEECTTTCCSCEEEEEECTT-SSCEEEEETT
T ss_pred ecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCC--------CccEEEecCCCCCceEEEEECCC-CCEEEEEecC
Confidence 45678999999999999 69999999999999998775 244444 35778999999995 5699999999
Q ss_pred CcEEEEECCCCcEEEE---------EEEEeecCCceEEEec---Cccc
Q 004998 679 GVVQVGQVLHLIYFSA---------LYCIVLNKLLIIFRYG---MFQE 714 (720)
Q Consensus 679 ~~v~lWDv~tg~~~~~---------v~~v~~~~~~~~~~~~---~~~~ 714 (720)
|+|+|||+++++.+.+ +.+++|++.+.++..| +-|.
T Consensus 198 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~ 245 (402)
T 2aq5_A 198 KRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSER 245 (402)
T ss_dssp SEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCE
T ss_pred CcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCc
Confidence 9999999999998876 4789999999999988 5554
No 326
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.25 E-value=3.6e-11 Score=137.29 Aligned_cols=107 Identities=12% Similarity=0.061 Sum_probs=90.8
Q ss_pred CCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec--CCCCEEEEEEecC---------CCC
Q 004998 602 DLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA--SRSKLSSICWNSY---------IKS 670 (720)
Q Consensus 602 ~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~--~~~~i~~v~~~~~---------~~~ 670 (720)
.+.+|...|.+++|+|||++||+|+.|++|+|||+.+.. ++..+. |...|++++|+|. ++.
T Consensus 483 ~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~--------~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~ 554 (615)
T 1pgu_A 483 LKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSRE--------VKTSRWAFRTSKINAISWKPAEKGANEEEIEED 554 (615)
T ss_dssp CSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE--------EEECCSCCCSSCEEEEEECCCC------CCSCC
T ss_pred ccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCc--------ceeEeecCCCCceeEEEEcCccccccccccCCC
Confidence 355678999999999999999999999999999997762 333333 6788999999992 356
Q ss_pred EEEEEeCCCcEEEEECCCC-cEEEE-------EEEEeecCCceEEEecCccceEE
Q 004998 671 QIASSNFEGVVQVGQVLHL-IYFSA-------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 671 ~laS~s~D~~v~lWDv~tg-~~~~~-------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
+||+++.||+|+|||+.++ +++.. |++++|++.+. +++++.|..-+
T Consensus 555 ~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~l~~s~~~~-l~s~~~d~~v~ 608 (615)
T 1pgu_A 555 LVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPST-LVSSGADACIK 608 (615)
T ss_dssp EEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEETTE-EEEEETTSCEE
T ss_pred EEEEEcCCCcEEEEECCCCceechhhhcCccceEEEEEcCCCC-eEEecCCceEE
Confidence 9999999999999999998 67765 99999999999 99998886443
No 327
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.24 E-value=2.1e-11 Score=132.71 Aligned_cols=99 Identities=10% Similarity=-0.043 Sum_probs=85.8
Q ss_pred CCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCCCcEEEEEC
Q 004998 608 NLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGVVQVGQV 686 (720)
Q Consensus 608 ~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~v~~~~~~~~~laS~s~D~~v~lWDv 686 (720)
.++....|+|||++||+|+.|++|+|||+.+. .++..+ .|...|++++|+|+ +.+|||++.|++|+|||+
T Consensus 98 ~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~--------~~~~~~~~h~~~v~~~~~~~~-~~~l~s~s~d~~i~iwd~ 168 (420)
T 3vl1_A 98 DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFN--------LQREIDQAHVSEITKLKFFPS-GEALISSSQDMQLKIWSV 168 (420)
T ss_dssp CEEEEEEECSSSCEEEEEETTSCEEEECTTSC--------EEEEETTSSSSCEEEEEECTT-SSEEEEEETTSEEEEEET
T ss_pred CceEEEEEecCCCEEEEEECCCCEEEEeCCCc--------ceeeecccccCccEEEEECCC-CCEEEEEeCCCeEEEEeC
Confidence 66777789999999999999999999998765 233443 46788999999996 569999999999999999
Q ss_pred CCCcEEEE-------EEEEeecCCceEEEecCccce
Q 004998 687 LHLIYFSA-------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 687 ~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
.+++++.+ |++++|+|.+..+++|+.|..
T Consensus 169 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~ 204 (420)
T 3vl1_A 169 KDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGT 204 (420)
T ss_dssp TTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSC
T ss_pred CCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCc
Confidence 99988765 899999999999999998864
No 328
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.23 E-value=3.2e-12 Score=131.80 Aligned_cols=95 Identities=14% Similarity=0.091 Sum_probs=74.9
Q ss_pred eeehhhhcccCCCCCc--eecccceeecCCCCCcEEEEEecCC--C----CHHHHHhCCCCCCCHHHHHHHHHHHHHHHH
Q 004998 64 KHSDGVELTHGDHLRN--QGGLSGVCENEAAIDPFVHAIEWGD--V----SLRQWLDKPKRSVDVYECLHIFRQIVEIVY 135 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnI--V~l~~~~~~~~~~~~~~~lv~E~~g--g----sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~ 135 (720)
..+|..+|.++.|++| ..+++ .. ..++||||.| | +|.+++.. .++.++..++.||+.||.
T Consensus 117 ~~~E~~~l~~l~~~~i~~p~~~~----~~----~~~lVmE~~g~~g~~~~~L~~~~~~----~~~~~~~~i~~qi~~~l~ 184 (258)
T 1zth_A 117 TEKEFRNLERAKEAGVSVPQPYT----YM----KNVLLMEFIGEDELPAPTLVELGRE----LKELDVEGIFNDVVENVK 184 (258)
T ss_dssp HHHHHHHHHHHHHTTCCCCCEEE----EE----TTEEEEECCEETTEECCBHHHHGGG----GGGSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCCeEEE----cC----CCEEEEEecCCCCCccccHHHHhhc----cChHHHHHHHHHHHHHHH
Confidence 4478888988888865 33333 11 3489999953 3 88887632 235578899999999999
Q ss_pred HHH-HcCceeccCCCCcEEEccCCceEEeccCcccCCC
Q 004998 136 AAH-SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSG 172 (720)
Q Consensus 136 yLH-s~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g 172 (720)
||| +.|||||||||+|||++. .++|+|||++....
T Consensus 185 ~lH~~~givHrDlkp~NILl~~--~~~liDFG~a~~~~ 220 (258)
T 1zth_A 185 RLYQEAELVHADLSEYNIMYID--KVYFIDMGQAVTLR 220 (258)
T ss_dssp HHHHTSCEECSSCSTTSEEESS--SEEECCCTTCEETT
T ss_pred HHHHHCCEEeCCCCHHHEEEcC--cEEEEECcccccCC
Confidence 999 999999999999999988 99999999996543
No 329
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.23 E-value=5.1e-11 Score=124.45 Aligned_cols=113 Identities=16% Similarity=0.194 Sum_probs=88.0
Q ss_pred CCCCCCeEEEEECCC--CCEEEEeeCCCcEEEeeCCccccccc-------------------------------------
Q 004998 604 LNSSNLVCSLSFDRD--GELFAAAGVNKKIKVFECDAIINENR------------------------------------- 644 (720)
Q Consensus 604 ~~~~~~V~sv~f~~d--g~~lat~~~d~~i~iwd~~~~~~~~~------------------------------------- 644 (720)
.+|...|.+++|+|+ +.+||+|+.|++|+|||+.+......
T Consensus 107 ~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~ 186 (351)
T 3f3f_A 107 NDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLA 186 (351)
T ss_dssp CCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEE
T ss_pred cccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEE
Confidence 356899999999999 99999999999999999875311000
Q ss_pred --------------ccc-cceEEe-cCCCCEEEEEEecCCC---CEEEEEeCCCcEEEEECCCC----------------
Q 004998 645 --------------DIH-YPVVEM-ASRSKLSSICWNSYIK---SQIASSNFEGVVQVGQVLHL---------------- 689 (720)
Q Consensus 645 --------------~~~-~~~~~~-~~~~~i~~v~~~~~~~---~~laS~s~D~~v~lWDv~tg---------------- 689 (720)
... .++..+ .|...|++++|+|++. ++|||++.||+|+|||++++
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 266 (351)
T 3f3f_A 187 VSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMF 266 (351)
T ss_dssp EEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC---------------
T ss_pred EecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceecc
Confidence 000 013333 3577899999999753 69999999999999999876
Q ss_pred ------------------------------cEEEE-------EEEEeecCCceEEEecCccceE
Q 004998 690 ------------------------------IYFSA-------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 690 ------------------------------~~~~~-------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
+.+.+ |++++|+|.+..+++|+.|..-
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v 330 (351)
T 3f3f_A 267 DNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKV 330 (351)
T ss_dssp ------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEETTSCE
T ss_pred CCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEEEEecCCCcE
Confidence 44443 8999999999999999988643
No 330
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.23 E-value=2.4e-11 Score=144.21 Aligned_cols=108 Identities=13% Similarity=0.142 Sum_probs=87.9
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCC-CCEEEEEeCCCc
Q 004998 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYI-KSQIASSNFEGV 680 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~v~~~~~~-~~~laS~s~D~~ 680 (720)
+.+|.+.|++++|+|||++|||||.|++|+|||+..... .++..+ .|.+.|++|+|+|+. +++||||+.||+
T Consensus 5 l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~------~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~ 78 (753)
T 3jro_A 5 ANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETH------KLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGK 78 (753)
T ss_dssp ---CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEE------EEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSC
T ss_pred cccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCC------ccceeccCCcCceEEEEecCCCCCCEEEEEeCCCe
Confidence 467899999999999999999999999999999763211 233344 457889999999852 679999999999
Q ss_pred EEEEECCCCc--EEEE-------EEEEeecCC--ceEEEecCccceE
Q 004998 681 VQVGQVLHLI--YFSA-------LYCIVLNKL--LIIFRYGMFQEVK 716 (720)
Q Consensus 681 v~lWDv~tg~--~~~~-------v~~v~~~~~--~~~~~~~~~~~~~ 716 (720)
|+|||+.+++ .+.. |+|++|+|. +..+.+|+.|..-
T Consensus 79 I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I 125 (753)
T 3jro_A 79 VLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKV 125 (753)
T ss_dssp EEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEE
T ss_pred EEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcE
Confidence 9999999997 4443 899999999 9999999887643
No 331
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.23 E-value=4.8e-11 Score=130.81 Aligned_cols=112 Identities=9% Similarity=0.054 Sum_probs=86.6
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccc-cceEEecCCCCEEEEEEecCCCCEEEEEeCCCcE
Q 004998 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIH-YPVVEMASRSKLSSICWNSYIKSQIASSNFEGVV 681 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~v 681 (720)
+.+|...|.+++|+|||++||+| .|++|+|||+.+......... .|.....|...|++++|+|++.++||+|+.||+|
T Consensus 173 ~~~h~~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i 251 (447)
T 3dw8_B 173 ANAHTYHINSISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTI 251 (447)
T ss_dssp CSCCSSCCCEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCE
T ss_pred ccCCCcceEEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeE
Confidence 35789999999999999999998 799999999874311000000 0111224577899999999765899999999999
Q ss_pred EEEECCCCcE----EE-------------------EEEEEeecCCceEEEecCccce
Q 004998 682 QVGQVLHLIY----FS-------------------ALYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 682 ~lWDv~tg~~----~~-------------------~v~~v~~~~~~~~~~~~~~~~~ 715 (720)
+|||+++++. +. .|.+++|+|.+.++++|+...+
T Consensus 252 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~~~v 308 (447)
T 3dw8_B 252 RLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDYLSV 308 (447)
T ss_dssp EEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEESSEE
T ss_pred EEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeCCeE
Confidence 9999999875 22 4889999999999998877333
No 332
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.22 E-value=6.6e-12 Score=137.07 Aligned_cols=110 Identities=7% Similarity=-0.149 Sum_probs=78.7
Q ss_pred CCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecC-------CCCEEEEEe
Q 004998 605 NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSY-------IKSQIASSN 676 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~v~~~~~-------~~~~laS~s 676 (720)
+|...+....+++++.+||+||.|++|||||..+.... ...++..+ .|.+.|++|+|+|. ++++|||||
T Consensus 87 ~~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~---~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s 163 (393)
T 4gq1_A 87 LHDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETII---TQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVG 163 (393)
T ss_dssp ----------CCEEEEEEEEEETTSCEEEEEEETTEEE---EEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEE
T ss_pred ccCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccc---eeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEE
Confidence 45666777788889999999999999999997664110 00122223 35789999999982 457999999
Q ss_pred CCCcEEEEECCCCcEEEE-------EEEEeecCCc-eEEEecCccceEE
Q 004998 677 FEGVVQVGQVLHLIYFSA-------LYCIVLNKLL-IIFRYGMFQEVKY 717 (720)
Q Consensus 677 ~D~~v~lWDv~tg~~~~~-------v~~v~~~~~~-~~~~~~~~~~~~~ 717 (720)
.|++|||||++++.++.. |.+|+|+|.+ ..+++|+.|..-.
T Consensus 164 ~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~ 212 (393)
T 4gq1_A 164 DDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIR 212 (393)
T ss_dssp TTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEE
T ss_pred CCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEE
Confidence 999999999998877665 8999999987 4899999886543
No 333
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.22 E-value=3.9e-11 Score=132.33 Aligned_cols=112 Identities=13% Similarity=0.143 Sum_probs=88.6
Q ss_pred CCCCCCeEEEEECCCCC-EEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCCCcE
Q 004998 604 LNSSNLVCSLSFDRDGE-LFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGVV 681 (720)
Q Consensus 604 ~~~~~~V~sv~f~~dg~-~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~v~~~~~~~~~laS~s~D~~v 681 (720)
.+|...|++|+|+|++. +||||+.|++|+|||+.+........ .+...+ .|...|.+|+|+|.++.+|||++.||+|
T Consensus 178 ~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~-~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i 256 (430)
T 2xyi_A 178 RGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVI-DAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKL 256 (430)
T ss_dssp ECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEE-ECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEE
T ss_pred cCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCcee-ccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeE
Confidence 45688999999999999 99999999999999997632111111 123333 5577899999999878899999999999
Q ss_pred EEEECCCC---cEEEE-------EEEEeecCCce-EEEecCccceE
Q 004998 682 QVGQVLHL---IYFSA-------LYCIVLNKLLI-IFRYGMFQEVK 716 (720)
Q Consensus 682 ~lWDv~tg---~~~~~-------v~~v~~~~~~~-~~~~~~~~~~~ 716 (720)
++||++++ +.+.. |.|++|+|.+. ++++|+.|..-
T Consensus 257 ~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v 302 (430)
T 2xyi_A 257 MIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTV 302 (430)
T ss_dssp EEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEE
T ss_pred EEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeE
Confidence 99999987 44443 89999999887 68888877543
No 334
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.22 E-value=1.2e-10 Score=121.78 Aligned_cols=119 Identities=9% Similarity=-0.014 Sum_probs=98.0
Q ss_pred hhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEE
Q 004998 583 LCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSI 662 (720)
Q Consensus 583 l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v 662 (720)
..+++...+.+.+..+.+ ...|.+++|+|+|++||+|+.|++|++||+.+.. ......+...|.++
T Consensus 206 ~i~~~d~~~~~~~~~~~~------~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~--------~~~~~~~~~~v~~~ 271 (337)
T 1gxr_A 206 TVRSWDLREGRQLQQHDF------TSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPD--------KYQLHLHESCVLSL 271 (337)
T ss_dssp EEEEEETTTTEEEEEEEC------SSCEEEEEECTTSSEEEEEETTSCEEEEETTSSC--------EEEECCCSSCEEEE
T ss_pred cEEEEECCCCceEeeecC------CCceEEEEECCCCCEEEEEcCCCcEEEEECCCCC--------eEEEcCCccceeEE
Confidence 445566666666666654 6789999999999999999999999999987652 22334557889999
Q ss_pred EEecCCCCEEEEEeCCCcEEEEECCCCcEEEE------EEEEeecCCceEEEecCccceE
Q 004998 663 CWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 663 ~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
+|+|+ +.+|++++.||+|++||+.+++.+.. +++++|++.+..+.+|+-|..-
T Consensus 272 ~~~~~-~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i 330 (337)
T 1gxr_A 272 KFAYC-GKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIVTGSGDKKA 330 (337)
T ss_dssp EECTT-SSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEETTSCE
T ss_pred EECCC-CCEEEEecCCCcEEEEECCCCeEEEEecCCCcEEEEEECCCCCEEEEecCCCeE
Confidence 99996 56999999999999999999998765 8999999999999998877643
No 335
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.22 E-value=5.7e-11 Score=148.21 Aligned_cols=122 Identities=8% Similarity=0.041 Sum_probs=101.0
Q ss_pred hhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCE
Q 004998 581 EGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKL 659 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i 659 (720)
++..+.|...+.+.+.+++ +|.+.|.+++|+|||++|||||.|++|+|||+.++ .++..+ .|...|
T Consensus 636 d~~i~vw~~~~~~~~~~~~-----~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~--------~~~~~~~~~~~~v 702 (1249)
T 3sfz_A 636 DKTLQVFKAETGEKLLDIK-----AHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATG--------KLVHTYDEHSEQV 702 (1249)
T ss_dssp TSCEEEEETTTCCEEEEEC-----CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC--------CEEEEEECCSSCE
T ss_pred CCeEEEEECCCCCEEEEec-----cCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCC--------ceEEEEcCCCCcE
Confidence 3445556666666665554 56899999999999999999999999999998876 244444 457789
Q ss_pred EEEEEecC-CCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccce
Q 004998 660 SSICWNSY-IKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 660 ~~v~~~~~-~~~~laS~s~D~~v~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
.+++|+|+ ...+|+|++.||+|++||+.+++++.+ |++++|+|.+..+++|+.|..
T Consensus 703 ~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~ 766 (1249)
T 3sfz_A 703 NCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGT 766 (1249)
T ss_dssp EEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSE
T ss_pred EEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCe
Confidence 99999996 345899999999999999999999876 899999999999999998754
No 336
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.22 E-value=4.1e-11 Score=131.56 Aligned_cols=120 Identities=15% Similarity=0.061 Sum_probs=90.5
Q ss_pred ceEEeeeeccCCCCCCCCCeEEEEECC-CCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCC
Q 004998 591 KLRVKADLNQGDLLNSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIK 669 (720)
Q Consensus 591 ~~~~~~~l~~~~~~~~~~~V~sv~f~~-dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~ 669 (720)
+.++++.+. .+|.+.|.+|+|+| ||++|||||.|++|+|||+.+..... ...+...+.|...|.+|+|+|+ +
T Consensus 51 ~g~~~~~~~----~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~--~~~~~~~~~h~~~v~~~~~~~~-~ 123 (437)
T 3gre_A 51 RGKLIATLM----ENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGE--VYSSSLTYDCSSTVTQITMIPN-F 123 (437)
T ss_dssp CCCEEEEEC----TTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTC--CCSCSEEEECSSCEEEEEECTT-S
T ss_pred cceEEeeec----cCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCc--ccceeeeccCCCCEEEEEEeCC-C
Confidence 345666662 34789999999999 99999999999999999986621111 1123445567889999999994 5
Q ss_pred CEEEEEeCCCcEEEEECC---CCcEEEE-----EEEEeec----------------CCceEEEecCccceEE
Q 004998 670 SQIASSNFEGVVQVGQVL---HLIYFSA-----LYCIVLN----------------KLLIIFRYGMFQEVKY 717 (720)
Q Consensus 670 ~~laS~s~D~~v~lWDv~---tg~~~~~-----v~~v~~~----------------~~~~~~~~~~~~~~~~ 717 (720)
++||||+.||+|+|||+. +|+.+.. +.++.|+ +.+..+++|+.|..-+
T Consensus 124 ~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~ 195 (437)
T 3gre_A 124 DAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVI 195 (437)
T ss_dssp SEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEE
T ss_pred CEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEE
Confidence 799999999999999994 7766653 5555544 5688888888876443
No 337
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.22 E-value=5.3e-11 Score=125.34 Aligned_cols=108 Identities=7% Similarity=0.031 Sum_probs=88.2
Q ss_pred CCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCC-EEEEEeCCCcEE
Q 004998 604 LNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKS-QIASSNFEGVVQ 682 (720)
Q Consensus 604 ~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~-~laS~s~D~~v~ 682 (720)
.+|.+.|.+++|+|||++||+|+.|++|+|||+.+.... ..+.....+...|.+++|+|+ ++ +|++++.||+|+
T Consensus 8 ~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~----~~~~~~~~~~~~v~~~~~~~~-~~~~l~~~~~dg~i~ 82 (342)
T 1yfq_A 8 QAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKN----VDLLQSLRYKHPLLCCNFIDN-TDLQIYVGTVQGEIL 82 (342)
T ss_dssp SCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTE----EEEEEEEECSSCEEEEEEEES-SSEEEEEEETTSCEE
T ss_pred cCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCcc----ccceeeeecCCceEEEEECCC-CCcEEEEEcCCCeEE
Confidence 367899999999999999999999999999998665210 012334466889999999995 67 899999999999
Q ss_pred EEEC-CCCcEEE--------EEEEEeecCCceEEEecCccceEE
Q 004998 683 VGQV-LHLIYFS--------ALYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 683 lWDv-~tg~~~~--------~v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
+||+ .+++... .|++++|++ +..+.+++.|..-+
T Consensus 83 ~wd~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~ 125 (342)
T 1yfq_A 83 KVDLIGSPSFQALTNNEANLGICRICKYG-DDKLIAASWDGLIE 125 (342)
T ss_dssp EECSSSSSSEEECBSCCCCSCEEEEEEET-TTEEEEEETTSEEE
T ss_pred EEEeccCCceEeccccCCCCceEEEEeCC-CCEEEEEcCCCeEE
Confidence 9999 8876532 178999999 99999999886543
No 338
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.21 E-value=7e-11 Score=147.39 Aligned_cols=103 Identities=17% Similarity=0.270 Sum_probs=89.1
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCCCcE
Q 004998 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGVV 681 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~v~~~~~~~~~laS~s~D~~v 681 (720)
+.+|.+.|.+++|+|||++|||||.|++|+|||+.+. .++..+ .|...|.+++|+|+ +.+|||++.||+|
T Consensus 611 ~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~--------~~~~~~~~h~~~v~~~~~s~~-~~~l~s~~~d~~v 681 (1249)
T 3sfz_A 611 VRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETG--------EKLLDIKAHEDEVLCCAFSSD-DSYIATCSADKKV 681 (1249)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC--------CEEEEECCCSSCEEEEEECTT-SSEEEEEETTSEE
T ss_pred EecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCC--------CEEEEeccCCCCEEEEEEecC-CCEEEEEeCCCeE
Confidence 4578999999999999999999999999999998776 234444 35788999999996 4699999999999
Q ss_pred EEEECCCCcEEEE-------EEEEeecC--CceEEEecCccc
Q 004998 682 QVGQVLHLIYFSA-------LYCIVLNK--LLIIFRYGMFQE 714 (720)
Q Consensus 682 ~lWDv~tg~~~~~-------v~~v~~~~--~~~~~~~~~~~~ 714 (720)
+|||+.+|+++.+ |+|++|++ ....+.+|+.|-
T Consensus 682 ~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~ 723 (1249)
T 3sfz_A 682 KIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDF 723 (1249)
T ss_dssp EEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTS
T ss_pred EEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCC
Confidence 9999999999886 89999999 556788887774
No 339
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.21 E-value=8.8e-11 Score=125.04 Aligned_cols=125 Identities=14% Similarity=0.059 Sum_probs=95.2
Q ss_pred hhhhhccccceE--EeeeeccCCCCCCCCCeEEEEECCC--CCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCC
Q 004998 582 GLCKYLSFSKLR--VKADLNQGDLLNSSNLVCSLSFDRD--GELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRS 657 (720)
Q Consensus 582 ~l~~~~~~~~~~--~~~~l~~~~~~~~~~~V~sv~f~~d--g~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 657 (720)
+..++|...+.+ .+..+ .+|...|.+++|+|+ |.+||+|+.|++|+|||+.+... ..+.....+..
T Consensus 79 g~v~iwd~~~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~-----~~~~~~~~~~~ 148 (379)
T 3jrp_A 79 GKVLIWKEENGRWSQIAVH-----AVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGT-----TSPIIIDAHAI 148 (379)
T ss_dssp SCEEEEEEETTEEEEEEEE-----CCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSC-----CCEEEEECCTT
T ss_pred CEEEEEEcCCCceeEeeee-----cCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCc-----eeeEEecCCCC
Confidence 344555544433 33333 346889999999999 99999999999999999876521 11223335678
Q ss_pred CEEEEEEecC------------CCCEEEEEeCCCcEEEEECCCCcE----EEE-------EEEEeecCC---ceEEEecC
Q 004998 658 KLSSICWNSY------------IKSQIASSNFEGVVQVGQVLHLIY----FSA-------LYCIVLNKL---LIIFRYGM 711 (720)
Q Consensus 658 ~i~~v~~~~~------------~~~~laS~s~D~~v~lWDv~tg~~----~~~-------v~~v~~~~~---~~~~~~~~ 711 (720)
.|.+++|+|. ++.+||+++.||+|+|||+++++. +.+ |++++|+|. +..+++|+
T Consensus 149 ~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~ 228 (379)
T 3jrp_A 149 GVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVS 228 (379)
T ss_dssp CEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEE
T ss_pred ceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEe
Confidence 8999999995 467999999999999999988753 222 889999999 89999999
Q ss_pred ccceE
Q 004998 712 FQEVK 716 (720)
Q Consensus 712 ~~~~~ 716 (720)
.|..-
T Consensus 229 ~dg~i 233 (379)
T 3jrp_A 229 QDRTC 233 (379)
T ss_dssp TTSCE
T ss_pred CCCEE
Confidence 88643
No 340
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.21 E-value=1.7e-10 Score=120.70 Aligned_cols=119 Identities=8% Similarity=0.052 Sum_probs=98.4
Q ss_pred hhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEE
Q 004998 583 LCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSI 662 (720)
Q Consensus 583 l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v 662 (720)
...++...+.+++..++ +|...|.+++|+|+|.+|++|+.|++|++||+.+. .++..+.+...|.++
T Consensus 164 ~v~~~d~~~~~~~~~~~-----~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~--------~~~~~~~~~~~v~~~ 230 (337)
T 1gxr_A 164 NIAVWDLHNQTLVRQFQ-----GHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREG--------RQLQQHDFTSQIFSL 230 (337)
T ss_dssp CEEEEETTTTEEEEEEC-----CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT--------EEEEEEECSSCEEEE
T ss_pred cEEEEeCCCCceeeeee-----cccCceEEEEECCCCCEEEEEecCCcEEEEECCCC--------ceEeeecCCCceEEE
Confidence 34555555556666654 35789999999999999999999999999998775 245555667889999
Q ss_pred EEecCCCCEEEEEeCCCcEEEEECCCCcEEEE------EEEEeecCCceEEEecCccce
Q 004998 663 CWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 663 ~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
+|+|+ +.+|++++.|+.|++||+.+++.... |.+++|++.+..+.+++.|..
T Consensus 231 ~~s~~-~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~ 288 (337)
T 1gxr_A 231 GYCPT-GEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNL 288 (337)
T ss_dssp EECTT-SSEEEEEETTSCEEEEETTSSCEEEECCCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred EECCC-CCEEEEEcCCCcEEEEECCCCCeEEEcCCccceeEEEECCCCCEEEEecCCCc
Confidence 99996 56999999999999999999887654 899999999999999987754
No 341
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.21 E-value=3.5e-11 Score=127.47 Aligned_cols=121 Identities=10% Similarity=0.145 Sum_probs=95.3
Q ss_pred hhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECC-CCCEEEEeeCCCcEEEeeCCcccccccccccceEEe----c
Q 004998 580 LEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM----A 654 (720)
Q Consensus 580 ~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~-dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~----~ 654 (720)
.++..++|...+.+.+..++ +|...|.+++|+| ++.+||+|+.|++|+|||+.+. .++..+ .
T Consensus 93 ~dg~i~v~d~~~~~~~~~~~-----~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~--------~~~~~~~~~~~ 159 (366)
T 3k26_A 93 SRGIIRIINPITMQCIKHYV-----GHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTD--------TLVAIFGGVEG 159 (366)
T ss_dssp TTCEEEEECTTTCCEEEEEE-----SCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTT--------EEEEEECSTTS
T ss_pred CCCEEEEEEchhceEeeeec-----CCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecC--------eEEEEeccccc
Confidence 34455666666667766665 4589999999999 9999999999999999998765 233333 4
Q ss_pred CCCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEE-----------------------------------EEEEEe
Q 004998 655 SRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFS-----------------------------------ALYCIV 699 (720)
Q Consensus 655 ~~~~i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~-----------------------------------~v~~v~ 699 (720)
+...|.+++|+|+ +++|++++.||+|++||+++++.+. .|.|++
T Consensus 160 ~~~~v~~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 238 (366)
T 3k26_A 160 HRDEVLSADYDLL-GEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVR 238 (366)
T ss_dssp CSSCEEEEEECTT-SSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEE
T ss_pred ccCceeEEEECCC-CCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEE
Confidence 5788999999995 5699999999999999999886431 278899
Q ss_pred ecCCceEEEecCccceE
Q 004998 700 LNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 700 ~~~~~~~~~~~~~~~~~ 716 (720)
|+ +..+.+|+.|..-
T Consensus 239 ~~--~~~l~~~~~d~~i 253 (366)
T 3k26_A 239 WL--GDLILSKSCENAI 253 (366)
T ss_dssp EE--TTEEEEECSSSEE
T ss_pred Ec--CCEEEEEecCCEE
Confidence 98 6678888776543
No 342
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.21 E-value=3.6e-11 Score=127.07 Aligned_cols=126 Identities=16% Similarity=0.160 Sum_probs=93.9
Q ss_pred hhhhccccceEEeeeeccCCCCCCCCCeEEEEECC---CCCEEEEeeCCCcEEEeeCCcccccccccccce-EEecCCCC
Q 004998 583 LCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDR---DGELFAAAGVNKKIKVFECDAIINENRDIHYPV-VEMASRSK 658 (720)
Q Consensus 583 l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~---dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~-~~~~~~~~ 658 (720)
..+++...+.+.+.... |...|.+++|+| ++.+|++|+.|++|+|||+++..... ..+. ....+...
T Consensus 191 ~i~i~d~~~~~~~~~~~------~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~---~~~~~~~~~~~~~ 261 (357)
T 3i2n_A 191 DIKLFDLRNMALRWETN------IKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTK---GFASVSEKAHKST 261 (357)
T ss_dssp EEEEEETTTTEEEEEEE------CSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTT---EEEEEEEECCSSC
T ss_pred eEEEEECccCceeeecC------CCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCccc---ceeeeccCCCcCC
Confidence 34455555555443333 378899999999 99999999999999999987642100 0111 11246788
Q ss_pred EEEEEEecCCCCEEEEEeCCCcEEEEECCCCc-------------------EEEE-------EEEEeecCCceEEE-ecC
Q 004998 659 LSSICWNSYIKSQIASSNFEGVVQVGQVLHLI-------------------YFSA-------LYCIVLNKLLIIFR-YGM 711 (720)
Q Consensus 659 i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~-------------------~~~~-------v~~v~~~~~~~~~~-~~~ 711 (720)
|++++|+|++..+||+++.||+|+|||++++. ++.+ |++++|++.+..++ +|+
T Consensus 262 v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~ 341 (357)
T 3i2n_A 262 VWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSS 341 (357)
T ss_dssp EEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEE
T ss_pred EEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEec
Confidence 99999999765589999999999999998653 3333 89999999999998 899
Q ss_pred ccceEE
Q 004998 712 FQEVKY 717 (720)
Q Consensus 712 ~~~~~~ 717 (720)
.|..-+
T Consensus 342 ~d~~i~ 347 (357)
T 3i2n_A 342 FDQTVR 347 (357)
T ss_dssp TTSEEE
T ss_pred CCCcEE
Confidence 886544
No 343
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.20 E-value=1.2e-10 Score=127.71 Aligned_cols=123 Identities=12% Similarity=0.159 Sum_probs=98.6
Q ss_pred hhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCE
Q 004998 581 EGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKL 659 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i 659 (720)
+.-.++|...+.+++..+. +.+|...|+||+|+|||++||+|+.|++|+|||+.+. .++..+ .|...|
T Consensus 124 d~tV~lWd~~tg~~~~~~~---~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~--------~~~~~~~~h~~~v 192 (420)
T 4gga_A 124 DNSVYLWSASSGDILQLLQ---MEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQ--------KRLRNMTSHSARV 192 (420)
T ss_dssp TTEEEEEETTTCCEEEEEE---CCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTT--------EEEEEECCCSSCE
T ss_pred CCEEEEEECCCCCEEEEEE---ecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCC--------cEEEEEeCCCCce
Confidence 4456777777766666654 3467889999999999999999999999999998876 234444 357789
Q ss_pred EEEEEecCCCCEEEEEeCCCcEEEEECCCCcEE-EE-------EEEEeecCCceEEEecCccceEE
Q 004998 660 SSICWNSYIKSQIASSNFEGVVQVGQVLHLIYF-SA-------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 660 ~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~-~~-------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
.+++|++ .+|+||+.|++|++||+.+.... .+ +.++.|++.+..+.++..|...+
T Consensus 193 ~~~s~~~---~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~ 255 (420)
T 4gga_A 193 GSLSWNS---YILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVN 255 (420)
T ss_dssp EEEEEET---TEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred EEEeeCC---CEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccce
Confidence 9999986 58999999999999999876543 32 78999999999999998876543
No 344
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.20 E-value=1e-10 Score=128.98 Aligned_cols=107 Identities=10% Similarity=0.205 Sum_probs=87.0
Q ss_pred CCCCCCCeEEEEECC-CCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCCCc
Q 004998 603 LLNSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGV 680 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~-dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~v~~~~~~~~~laS~s~D~~ 680 (720)
+.+|...|.+|+|+| ++.+||+|+.|++|+|||+++... ..++..+ .|...|++|+|+|++..+||+|+.||+
T Consensus 227 ~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~-----~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~ 301 (430)
T 2xyi_A 227 FTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNT-----SKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKT 301 (430)
T ss_dssp ECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCS-----SSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSE
T ss_pred ecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCC-----CcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCe
Confidence 446789999999999 678999999999999999886510 1234444 557889999999988779999999999
Q ss_pred EEEEECCC-CcEEEE-------EEEEeecCCce-EEEecCccc
Q 004998 681 VQVGQVLH-LIYFSA-------LYCIVLNKLLI-IFRYGMFQE 714 (720)
Q Consensus 681 v~lWDv~t-g~~~~~-------v~~v~~~~~~~-~~~~~~~~~ 714 (720)
|+|||+++ ++.+.+ |++++|+|.+. ++++|+.|-
T Consensus 302 v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~ 344 (430)
T 2xyi_A 302 VALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDR 344 (430)
T ss_dssp EEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTS
T ss_pred EEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCC
Confidence 99999998 454544 89999999984 678877664
No 345
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.19 E-value=1.7e-10 Score=124.08 Aligned_cols=91 Identities=8% Similarity=-0.067 Sum_probs=66.8
Q ss_pred eeCCCcEEEeeCCcccccccc-------cccc-eEEe-cCCCCEEEEEEecCCCCEEEEEeCCCc-EEEEECCCCcEEEE
Q 004998 625 AGVNKKIKVFECDAIINENRD-------IHYP-VVEM-ASRSKLSSICWNSYIKSQIASSNFEGV-VQVGQVLHLIYFSA 694 (720)
Q Consensus 625 ~~~d~~i~iwd~~~~~~~~~~-------~~~~-~~~~-~~~~~i~~v~~~~~~~~~laS~s~D~~-v~lWDv~tg~~~~~ 694 (720)
|+.|++|+|||+.+....... .-.| +..+ .|.+.|++|+|+|+ +.+||||+.||+ |+|||+++|+++.+
T Consensus 155 g~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~-g~~l~s~s~d~~~v~iwd~~~~~~~~~ 233 (355)
T 3vu4_A 155 EFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRK-SDMVATCSQDGTIIRVFKTEDGVLVRE 233 (355)
T ss_dssp SSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTT-SSEEEEEETTCSEEEEEETTTCCEEEE
T ss_pred CCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCC-CCEEEEEeCCCCEEEEEECCCCcEEEE
Confidence 566777777776653100000 0013 4444 45788999999995 579999999999 99999999998765
Q ss_pred ---------EEEEeecCCceEEEecCccceE
Q 004998 695 ---------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 695 ---------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
|++++|+|.+..+++|+.|..-
T Consensus 234 ~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v 264 (355)
T 3vu4_A 234 FRRGLDRADVVDMKWSTDGSKLAVVSDKWTL 264 (355)
T ss_dssp EECTTCCSCEEEEEECTTSCEEEEEETTCEE
T ss_pred EEcCCCCCcEEEEEECCCCCEEEEEECCCEE
Confidence 7899999999999999998643
No 346
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.19 E-value=2.3e-11 Score=131.90 Aligned_cols=105 Identities=10% Similarity=0.041 Sum_probs=88.4
Q ss_pred CCCCCeEEEEECC-CCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCCCcEE
Q 004998 605 NSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGVVQ 682 (720)
Q Consensus 605 ~~~~~V~sv~f~~-dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~v~~~~~~~~~laS~s~D~~v~ 682 (720)
+|...|.+++|+| ++.+||+|+.|++|+|||+.+. .++..+ .|...|.+++|+|++..+||+++.||+|+
T Consensus 260 ~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~--------~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~ 331 (416)
T 2pm9_A 260 GHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESA--------EQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIE 331 (416)
T ss_dssp CCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSC--------CEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEE
T ss_pred CccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCC--------ccceeecCCCCceEEEEECCCCCCEEEEEecCCcEE
Confidence 6789999999999 9999999999999999998775 245444 34778999999997768999999999999
Q ss_pred EEECCCCcEE------------------------------------------EEEEEEeecCCceEEEecCccceEE
Q 004998 683 VGQVLHLIYF------------------------------------------SALYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 683 lWDv~tg~~~------------------------------------------~~v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
|||+.+++.. ..+.+++|++.+.++++|+.|..-.
T Consensus 332 iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~la~~~~d~~v~ 408 (416)
T 2pm9_A 332 VQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPAAHWAFGGKLVQITPDGKGVS 408 (416)
T ss_dssp EEESCCCCCSSCC----------------------CCSCCCSSCCCCCSTTCCCSCCCEEETTTEEECBCTTSSCBC
T ss_pred EEEccCCCCCcccccccccccCCcccccccccccccccccccccccCCccccCCccceEEeeCCeEEEEeCCCCeEE
Confidence 9999877532 1256889999999999999886433
No 347
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.19 E-value=1.3e-10 Score=125.17 Aligned_cols=123 Identities=16% Similarity=0.159 Sum_probs=95.0
Q ss_pred hhhccccceEEeeeeccCCCCCC---CCCeEEEEECCCCCEEEEeeCC---CcEEEeeCCcccccccccccceEEec---
Q 004998 584 CKYLSFSKLRVKADLNQGDLLNS---SNLVCSLSFDRDGELFAAAGVN---KKIKVFECDAIINENRDIHYPVVEMA--- 654 (720)
Q Consensus 584 ~~~~~~~~~~~~~~l~~~~~~~~---~~~V~sv~f~~dg~~lat~~~d---~~i~iwd~~~~~~~~~~~~~~~~~~~--- 654 (720)
.+++...+.+++..++. ..+| ...|.+++|+|+|.+||+|+.| ++|+|||+.+. .++..+.
T Consensus 209 i~i~d~~~~~~~~~~~~--~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~--------~~~~~~~~~~ 278 (397)
T 1sq9_A 209 VQISELSTLRPLYNFES--QHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFG--------ERIGSLSVPT 278 (397)
T ss_dssp EEEEETTTTEEEEEEEC--CC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTC--------CEEEEECBC-
T ss_pred EEEEECCCCceeEEEec--cccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCC--------cccceeccCc
Confidence 34444445555555531 1236 7899999999999999999999 99999998765 2333332
Q ss_pred -----------CCCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE----------------------------E
Q 004998 655 -----------SRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA----------------------------L 695 (720)
Q Consensus 655 -----------~~~~i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~----------------------------v 695 (720)
+...|.+++|+|+ +.+||+++.||+|+|||+.+++++.+ |
T Consensus 279 ~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v 357 (397)
T 1sq9_A 279 HSSQASLGEFAHSSWVMSLSFNDS-GETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGV 357 (397)
T ss_dssp -------CCBSBSSCEEEEEECSS-SSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCE
T ss_pred ccccccccccccCCcEEEEEECCC-CCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCce
Confidence 6788999999995 56999999999999999999987654 5
Q ss_pred EEEeecCCc----------eEEEecCccceEE
Q 004998 696 YCIVLNKLL----------IIFRYGMFQEVKY 717 (720)
Q Consensus 696 ~~v~~~~~~----------~~~~~~~~~~~~~ 717 (720)
++++|++.+ ..+++|+.|..-+
T Consensus 358 ~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~ 389 (397)
T 1sq9_A 358 FDVKFLKKGWRSGMGADLNESLCCVCLDRSIR 389 (397)
T ss_dssp EEEEEECTTTSBSTTCTTSCEEEEEETTTEEE
T ss_pred eEEEeccccccccccccccceEEEecCCCcEE
Confidence 589999998 7899998886543
No 348
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.18 E-value=1e-10 Score=131.92 Aligned_cols=102 Identities=8% Similarity=0.007 Sum_probs=77.5
Q ss_pred CeEEEEECCCCCEEEEeeCCCcEEEeeCCcccc-cccccccceEEe-----cCCCCEEEEEEecCCCCEEEEEeCCCcEE
Q 004998 609 LVCSLSFDRDGELFAAAGVNKKIKVFECDAIIN-ENRDIHYPVVEM-----ASRSKLSSICWNSYIKSQIASSNFEGVVQ 682 (720)
Q Consensus 609 ~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~-~~~~~~~~~~~~-----~~~~~i~~v~~~~~~~~~laS~s~D~~v~ 682 (720)
.|.+++|||||++||+||.|++|+|||+.+..- .+.- ..+..+ +|.++|.+|+|+|++ ||+++.|++|+
T Consensus 131 sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~--i~l~ti~~~~~gh~~~V~sVawSPdg---Laass~D~tVr 205 (588)
T 2j04_A 131 TYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEF--YFESSIRLSDAGSKDWVTHIVWYEDV---LVAALSNNSVF 205 (588)
T ss_dssp CEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCC--EEEEEEECSCTTCCCCEEEEEEETTE---EEEEETTCCEE
T ss_pred cEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccc--eeeeeeecccccccccEEEEEEcCCc---EEEEeCCCeEE
Confidence 599999999999999999999999999876510 0000 012332 246799999999964 88888899999
Q ss_pred EEECCCCcE------EE-----EEEEEeecCCceEEEecCccceEE
Q 004998 683 VGQVLHLIY------FS-----ALYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 683 lWDv~tg~~------~~-----~v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
+||+.+++. +. .|++|+|+ +..+++++-.+|+.
T Consensus 206 lWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa~~~tIkL 249 (588)
T 2j04_A 206 SMTVSASSHQPVSRMIQNASRRKITDLKIV--DYKVVLTCPGYVHK 249 (588)
T ss_dssp EECCCSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEEECSSEEEE
T ss_pred EEECCCCccccceeeecccccCcEEEEEEE--CCEEEEEeCCeEEE
Confidence 999988773 32 18999999 57777777566654
No 349
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.18 E-value=1.6e-10 Score=122.93 Aligned_cols=106 Identities=16% Similarity=0.183 Sum_probs=86.3
Q ss_pred CCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccc----------cccccceEEe-cCCCCEEEEEEecCCCCEE
Q 004998 604 LNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINEN----------RDIHYPVVEM-ASRSKLSSICWNSYIKSQI 672 (720)
Q Consensus 604 ~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~----------~~~~~~~~~~-~~~~~i~~v~~~~~~~~~l 672 (720)
.+|...|.+++|+|++.+||+|+.|++|+|||+....... .....++..+ .+...|.+++|+|+ +.+|
T Consensus 139 ~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l 217 (372)
T 1k8k_C 139 KPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSAN-GSRV 217 (372)
T ss_dssp TTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSS-SSEE
T ss_pred cccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCC-CCEE
Confidence 4568899999999999999999999999999975321000 0112344555 45778999999995 4699
Q ss_pred EEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEec
Q 004998 673 ASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYG 710 (720)
Q Consensus 673 aS~s~D~~v~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~ 710 (720)
++++.||+|++||+++++++.+ |++++|++.+.++..|
T Consensus 218 ~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 262 (372)
T 1k8k_C 218 AWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAG 262 (372)
T ss_dssp EEEETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEE
T ss_pred EEEeCCCEEEEEECCCCceeEEEccCCCCeEEEEEecCCCEEEEE
Confidence 9999999999999999998876 8999999999999888
No 350
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.18 E-value=1.7e-10 Score=124.75 Aligned_cols=102 Identities=9% Similarity=0.168 Sum_probs=88.7
Q ss_pred CCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCEEEEEEecCCCCEEEEEeCCCcEE
Q 004998 604 LNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFEGVVQ 682 (720)
Q Consensus 604 ~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~v~~~~~~~~~laS~s~D~~v~ 682 (720)
.+|...|.+++|+|+|++||+|+.|++|+|||+.+. .++..+. +...|.+++|+|++ +|++++.|++|+
T Consensus 244 ~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~--------~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~d~~i~ 313 (425)
T 1r5m_A 244 IGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNG--------NSQNCFYGHSQSIVSASWVGDD--KVISCSMDGSVR 313 (425)
T ss_dssp CCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSB--------SCSEEECCCSSCEEEEEEETTT--EEEEEETTSEEE
T ss_pred ccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCC--------ccceEecCCCccEEEEEECCCC--EEEEEeCCCcEE
Confidence 356889999999999999999999999999998765 2344443 57789999999965 999999999999
Q ss_pred EEECCCCcEEEE-------EEEEeecCCceEEEecCccce
Q 004998 683 VGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 683 lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
+||+.+++.+.. +.+++|+|.+..++.|+.|-.
T Consensus 314 i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~ 353 (425)
T 1r5m_A 314 LWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQ 353 (425)
T ss_dssp EEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETTSC
T ss_pred EEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEECCCe
Confidence 999999998876 889999999999999988753
No 351
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.17 E-value=1.3e-10 Score=127.40 Aligned_cols=131 Identities=8% Similarity=0.038 Sum_probs=97.2
Q ss_pred hhhhhhcccc-ceEEeeee--ccCCCCCCCCCeEEEEECCCC-CEEEEeeCCCcEEEeeCCcccccccccccceEEecC-
Q 004998 581 EGLCKYLSFS-KLRVKADL--NQGDLLNSSNLVCSLSFDRDG-ELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS- 655 (720)
Q Consensus 581 ~~l~~~~~~~-~~~~~~~l--~~~~~~~~~~~V~sv~f~~dg-~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~- 655 (720)
++..++|... .-+.+..+ +...+.+|...|.+++|+|+| .+||+|+.|++|+|||+++.... ..++..+.+
T Consensus 197 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~----~~~~~~~~~~ 272 (447)
T 3dw8_B 197 DLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALC----DRHSKLFEEP 272 (447)
T ss_dssp SSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSS----CTTCEEECCC
T ss_pred CCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccc----cceeeEeccC
Confidence 4455566655 33333333 223567889999999999999 99999999999999998875210 012334433
Q ss_pred C------------CCEEEEEEecCCCCEEEEEeCCCcEEEEECCC-CcEEEEEE----------------------EEee
Q 004998 656 R------------SKLSSICWNSYIKSQIASSNFEGVVQVGQVLH-LIYFSALY----------------------CIVL 700 (720)
Q Consensus 656 ~------------~~i~~v~~~~~~~~~laS~s~D~~v~lWDv~t-g~~~~~v~----------------------~v~~ 700 (720)
. ..|.+++|+|+ +.+||+++. ++|+|||+++ ++++.++. +++|
T Consensus 273 ~~~~~~~~~~~~~~~v~~~~~s~~-g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~ 350 (447)
T 3dw8_B 273 EDPSNRSFFSEIISSISDVKFSHS-GRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCW 350 (447)
T ss_dssp -----CCHHHHHTTCEEEEEECTT-SSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEE
T ss_pred CCccccccccccCceEEEEEECCC-CCEEEEeeC-CeEEEEeCCCCccccceeeccccccccccccccccccccceEEEE
Confidence 2 28999999995 569999998 9999999997 87776532 2899
Q ss_pred cCCceEEEecCccceEE
Q 004998 701 NKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 701 ~~~~~~~~~~~~~~~~~ 717 (720)
+|.+.++++|+.|-.-+
T Consensus 351 s~~~~~l~s~s~dg~v~ 367 (447)
T 3dw8_B 351 NGSDSVVMTGSYNNFFR 367 (447)
T ss_dssp CTTSSEEEEECSTTEEE
T ss_pred CCCCCEEEEeccCCEEE
Confidence 99999999999886544
No 352
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.17 E-value=1.4e-10 Score=128.57 Aligned_cols=100 Identities=14% Similarity=0.167 Sum_probs=83.7
Q ss_pred CCCCCCCCeEEEEECCC---CCEEEEeeCCCcEEEeeCCcccccccccccceEE-e-cCCCCEEEEEEecCCCCEEEEEe
Q 004998 602 DLLNSSNLVCSLSFDRD---GELFAAAGVNKKIKVFECDAIINENRDIHYPVVE-M-ASRSKLSSICWNSYIKSQIASSN 676 (720)
Q Consensus 602 ~~~~~~~~V~sv~f~~d---g~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~-~-~~~~~i~~v~~~~~~~~~laS~s 676 (720)
.+.+|...|.+|+|+|| |++||||+.|++|+|||+.+. .++.. + .|.+.|.+++|+ ++.+|||++
T Consensus 190 ~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~--------~~~~~~~~~h~~~v~~~~~s--d~~~l~s~~ 259 (450)
T 2vdu_B 190 PILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQC--------FIVDKWLFGHKHFVSSICCG--KDYLLLSAG 259 (450)
T ss_dssp CSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCT--------TCEEEECCCCSSCEEEEEEC--STTEEEEEE
T ss_pred eeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCC--------ceeeeeecCCCCceEEEEEC--CCCEEEEEe
Confidence 34567899999999999 999999999999999998765 23333 3 457889999999 467999999
Q ss_pred CCCcEEEEECCCCcEEEEE--------------------------------EEEeecCCceEEEecC
Q 004998 677 FEGVVQVGQVLHLIYFSAL--------------------------------YCIVLNKLLIIFRYGM 711 (720)
Q Consensus 677 ~D~~v~lWDv~tg~~~~~v--------------------------------~~v~~~~~~~~~~~~~ 711 (720)
.|++|+|||+.+|+++.++ .+++|++.+.++..++
T Consensus 260 ~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~ 326 (450)
T 2vdu_B 260 GDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFV 326 (450)
T ss_dssp SSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEE
T ss_pred CCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEE
Confidence 9999999999999987653 4788999888887776
No 353
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.17 E-value=5.1e-11 Score=125.93 Aligned_cols=106 Identities=8% Similarity=0.015 Sum_probs=84.3
Q ss_pred CCCCCeEEEEECCCCC-EEEEeeC---CCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCC--CCEEEEEeCC
Q 004998 605 NSSNLVCSLSFDRDGE-LFAAAGV---NKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYI--KSQIASSNFE 678 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~-~lat~~~---d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~--~~~laS~s~D 678 (720)
+|...|.+|+|+|+|. ++|+|+. |++|+|||+.+... .++....+...|.+++|+|+. +.+||+++.|
T Consensus 16 ~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~------~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d 89 (357)
T 3i2n_A 16 GFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDL------KLLREIEKAKPIKCGTFGATSLQQRYLATGDFG 89 (357)
T ss_dssp ECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSE------EEEEEEEESSCEEEEECTTCCTTTCCEEEEETT
T ss_pred CCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcc------cceeeecccCcEEEEEEcCCCCCCceEEEecCC
Confidence 4689999999999996 5667776 99999999876521 123445678899999999974 6799999999
Q ss_pred CcEEEEECCCCc-EEEE-------EEEE------eecCCceEEEecCccceE
Q 004998 679 GVVQVGQVLHLI-YFSA-------LYCI------VLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 679 ~~v~lWDv~tg~-~~~~-------v~~v------~~~~~~~~~~~~~~~~~~ 716 (720)
|+|++||+.+++ .+.. |.++ +|++.+..+.+|+.|..-
T Consensus 90 g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i 141 (357)
T 3i2n_A 90 GNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTV 141 (357)
T ss_dssp SCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCE
T ss_pred CeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeE
Confidence 999999999988 5554 7888 567889999999888543
No 354
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.17 E-value=9.4e-11 Score=139.10 Aligned_cols=122 Identities=14% Similarity=0.136 Sum_probs=99.6
Q ss_pred hhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCE
Q 004998 581 EGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKL 659 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i 659 (720)
++..++|.+.+.+.+..+. +|.+.|.+++|+|||++||+|+.|++|+|||+.+. .++..+. |.+.|
T Consensus 34 ~g~v~iwd~~~~~~~~~~~-----~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~--------~~~~~~~~~~~~v 100 (814)
T 3mkq_A 34 SGRVEIWNYETQVEVRSIQ-----VTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTG--------EKVVDFEAHPDYI 100 (814)
T ss_dssp TSEEEEEETTTTEEEEEEE-----CCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTC--------CEEEEEECCSSCE
T ss_pred CCEEEEEECCCCceEEEEe-----cCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCC--------cEEEEEecCCCCE
Confidence 3455677777777777765 35889999999999999999999999999998776 2344443 57889
Q ss_pred EEEEEecCCCCEEEEEeCCCcEEEEECCCC-cEEEE-------EEEEeecC-CceEEEecCccceE
Q 004998 660 SSICWNSYIKSQIASSNFEGVVQVGQVLHL-IYFSA-------LYCIVLNK-LLIIFRYGMFQEVK 716 (720)
Q Consensus 660 ~~v~~~~~~~~~laS~s~D~~v~lWDv~tg-~~~~~-------v~~v~~~~-~~~~~~~~~~~~~~ 716 (720)
++++|+|+ +.+||+++.||+|+|||+.++ ..... |.|++|+| .+..+.+|+.|..-
T Consensus 101 ~~~~~s~~-~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v 165 (814)
T 3mkq_A 101 RSIAVHPT-KPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTV 165 (814)
T ss_dssp EEEEECSS-SSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEE
T ss_pred EEEEEeCC-CCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeE
Confidence 99999996 469999999999999999988 44443 89999999 88899999887643
No 355
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.16 E-value=3.4e-10 Score=119.80 Aligned_cols=119 Identities=8% Similarity=0.049 Sum_probs=97.3
Q ss_pred hhccccc-eEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEE
Q 004998 585 KYLSFSK-LRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSIC 663 (720)
Q Consensus 585 ~~~~~~~-~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~ 663 (720)
.++...+ .+.+..+. .|...|.+++|+|||.+|++|+.|++|+|||+.+. .++..+.+...+.+++
T Consensus 200 ~i~d~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~--------~~~~~~~~~~~~~~~~ 266 (369)
T 3zwl_B 200 SKYDVSNNYEYVDSID-----LHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTL--------QVLKKYETDCPLNTAV 266 (369)
T ss_dssp EEEETTTTTEEEEEEE-----CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC--------CEEEEEECSSCEEEEE
T ss_pred EEEECCCCcEeEEEEe-----cCCCceeEEEECCCCCEEEEecCCceEEEEECCCC--------ceeeeecCCCCceeEE
Confidence 3444443 44555554 35789999999999999999999999999998775 3455566778899999
Q ss_pred EecCCCCEEEEEeCCC--------------cEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceEE
Q 004998 664 WNSYIKSQIASSNFEG--------------VVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 664 ~~~~~~~~laS~s~D~--------------~v~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
|+|+ +.+|++++.|+ .|++||+.+++.+.. |++++|+|.+..+++|+.|..-+
T Consensus 267 ~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~ 340 (369)
T 3zwl_B 267 ITPL-KEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYASGGEDGFIR 340 (369)
T ss_dssp ECSS-SSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred ecCC-CceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCCCEEEEEcCCCeEE
Confidence 9996 46888888888 899999999998876 89999999999999999886543
No 356
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.16 E-value=3.1e-10 Score=123.58 Aligned_cols=120 Identities=13% Similarity=0.184 Sum_probs=94.5
Q ss_pred hhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEE
Q 004998 582 GLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLS 660 (720)
Q Consensus 582 ~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~ 660 (720)
+-.++|...+.+....+.. .|...|.+|+|+|||++||+|+.|++|+|||+.+. ..+..+ .|...|.
T Consensus 113 ~~v~lw~~~~~~~~~~~~~----~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~--------~~~~~~~~~~~~v~ 180 (401)
T 4aez_A 113 RNVYVWNADSGSVSALAET----DESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQ--------TKLRTMAGHQARVG 180 (401)
T ss_dssp TEEEEEETTTCCEEEEEEC----CTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTC--------CEEEEECCCSSCEE
T ss_pred CeEEEeeCCCCcEeEeeec----CCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCC--------eEEEEecCCCCceE
Confidence 3445555555555554442 26889999999999999999999999999998765 234444 4578899
Q ss_pred EEEEecCCCCEEEEEeCCCcEEEEECCC-CcEEEE-------EEEEeecCCceEEEecCccceE
Q 004998 661 SICWNSYIKSQIASSNFEGVVQVGQVLH-LIYFSA-------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 661 ~v~~~~~~~~~laS~s~D~~v~lWDv~t-g~~~~~-------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
+++|++ ++|++++.||+|++||+++ +..+.. |.+++|++.+..+++|+.|..-
T Consensus 181 ~~~~~~---~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v 241 (401)
T 4aez_A 181 CLSWNR---HVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVV 241 (401)
T ss_dssp EEEEET---TEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred EEEECC---CEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeE
Confidence 999965 5999999999999999994 444444 8999999999999999987543
No 357
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.15 E-value=1.4e-10 Score=122.67 Aligned_cols=93 Identities=12% Similarity=0.188 Sum_probs=77.4
Q ss_pred CCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEE--ecCCCCEEEEEeCCCcE
Q 004998 604 LNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICW--NSYIKSQIASSNFEGVV 681 (720)
Q Consensus 604 ~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~--~~~~~~~laS~s~D~~v 681 (720)
.+|.+.|.+++|+|||++||+|+.|++|+|||+.+. .++....+...|.+++| +|+ +.+|++++.||+|
T Consensus 83 ~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~--------~~~~~~~~~~~v~~~~~~~~~~-~~~l~~~~~dg~i 153 (368)
T 3mmy_A 83 QMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSN--------QAIQIAQHDAPVKTIHWIKAPN-YSCVMTGSWDKTL 153 (368)
T ss_dssp EECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT--------EEEEEEECSSCEEEEEEEECSS-CEEEEEEETTSEE
T ss_pred ccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCC--------CceeeccccCceEEEEEEeCCC-CCEEEEccCCCcE
Confidence 346899999999999999999999999999998776 23445567889999999 774 5689999999999
Q ss_pred EEEECCCCcEEEE------EEEEeecCCce
Q 004998 682 QVGQVLHLIYFSA------LYCIVLNKLLI 705 (720)
Q Consensus 682 ~lWDv~tg~~~~~------v~~v~~~~~~~ 705 (720)
+|||+++++++.. +.++.+.....
T Consensus 154 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (368)
T 3mmy_A 154 KFWDTRSSNPMMVLQLPERCYCADVIYPMA 183 (368)
T ss_dssp EEECSSCSSCSEEEECSSCEEEEEEETTEE
T ss_pred EEEECCCCcEEEEEecCCCceEEEecCCee
Confidence 9999999998776 55666665433
No 358
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.15 E-value=1.8e-10 Score=124.40 Aligned_cols=106 Identities=10% Similarity=0.099 Sum_probs=81.0
Q ss_pred CCCeEEEEECCCCC-EEEEeeCCCcEEEeeC----CcccccccccccceEEec-----------CCCCEEEEEEecCCCC
Q 004998 607 SNLVCSLSFDRDGE-LFAAAGVNKKIKVFEC----DAIINENRDIHYPVVEMA-----------SRSKLSSICWNSYIKS 670 (720)
Q Consensus 607 ~~~V~sv~f~~dg~-~lat~~~d~~i~iwd~----~~~~~~~~~~~~~~~~~~-----------~~~~i~~v~~~~~~~~ 670 (720)
...|.+++|+|||+ +||+|+.|++|+|||+ .+.... ... .+...+. +.+.|++++|+|+ ++
T Consensus 45 ~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-~~ 121 (425)
T 1r5m_A 45 LDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKY-WKL-TIIAELRHPFALSASSGKTTNQVTCLAWSHD-GN 121 (425)
T ss_dssp CSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------C-EEE-EEEEEEECCCCCC------CBCEEEEEECTT-SS
T ss_pred cCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCcccc-ccc-cccccccccccccccccCCCCceEEEEEcCC-CC
Confidence 68899999999999 9999999999999998 654200 000 0111111 3558999999995 57
Q ss_pred EEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceE
Q 004998 671 QIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 671 ~laS~s~D~~v~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
+||+++.||+|+||| .+++.+.. |++++|+|.+..+.+++.|..-
T Consensus 122 ~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i 173 (425)
T 1r5m_A 122 SIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVT 173 (425)
T ss_dssp EEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCE
T ss_pred EEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeE
Confidence 999999999999999 67777665 8999999999999998877543
No 359
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.14 E-value=1.8e-10 Score=119.37 Aligned_cols=97 Identities=14% Similarity=0.056 Sum_probs=82.9
Q ss_pred CCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCEEEEEEecCCCCEEEEEeCCCcEEEE
Q 004998 606 SSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFEGVVQVG 684 (720)
Q Consensus 606 ~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~v~~~~~~~~~laS~s~D~~v~lW 684 (720)
|...|.+++|+|++. |++|+.|++|+|||+.+. .++..+. +.+.|++++|+|++ .|++++.||+|+||
T Consensus 183 ~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~--------~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~dg~v~iw 251 (313)
T 3odt_A 183 HNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTG--------DVLRTYEGHESFVYCIKLLPNG--DIVSCGEDRTVRIW 251 (313)
T ss_dssp CSSCEEEEEEEETTE-EEEEETTSEEEEEETTTC--------CEEEEEECCSSCEEEEEECTTS--CEEEEETTSEEEEE
T ss_pred CcccEEEEEEcCCCe-EEEccCCCeEEEEECCch--------hhhhhhhcCCceEEEEEEecCC--CEEEEecCCEEEEE
Confidence 688999999999999 999999999999998765 2454443 57889999999965 59999999999999
Q ss_pred ECCCCcEEEE-------EEEEeecCCceEEEecCccc
Q 004998 685 QVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 685 Dv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~ 714 (720)
|+.+++++.. |++++|++.+.++ .|+.|-
T Consensus 252 d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~dg 287 (313)
T 3odt_A 252 SKENGSLKQVITLPAISIWSVDCMSNGDII-VGSSDN 287 (313)
T ss_dssp CTTTCCEEEEEECSSSCEEEEEECTTSCEE-EEETTS
T ss_pred ECCCCceeEEEeccCceEEEEEEccCCCEE-EEeCCC
Confidence 9999998876 8999999999855 455554
No 360
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.13 E-value=5e-10 Score=116.34 Aligned_cols=115 Identities=15% Similarity=0.163 Sum_probs=87.3
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCccccccc------c-------------------------------
Q 004998 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENR------D------------------------------- 645 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~------~------------------------------- 645 (720)
+.+|...+.+++|+++|++|+||+.|++|+|||+++...... .
T Consensus 146 ~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~l 225 (318)
T 4ggc_A 146 LSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRI 225 (318)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEE
T ss_pred EcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEE
Confidence 456789999999999999999999999999999875311100 0
Q ss_pred ----cccceEEecCCCCEEEEEEecCCCCEEE-EEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCcc
Q 004998 646 ----IHYPVVEMASRSKLSSICWNSYIKSQIA-SSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 646 ----~~~~~~~~~~~~~i~~v~~~~~~~~~la-S~s~D~~v~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~ 713 (720)
.........+...+.+++|+|.+..+++ +++.|++|+|||+.+++++.+ |+|++|+|.+..+++|+.|
T Consensus 226 wd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D 305 (318)
T 4ggc_A 226 WNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAAD 305 (318)
T ss_dssp EETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETT
T ss_pred EecccccccccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecC
Confidence 0001112233556788999997654433 344799999999999999987 8999999999999999999
Q ss_pred ceEE
Q 004998 714 EVKY 717 (720)
Q Consensus 714 ~~~~ 717 (720)
..-.
T Consensus 306 ~~v~ 309 (318)
T 4ggc_A 306 ETLR 309 (318)
T ss_dssp TEEE
T ss_pred CeEE
Confidence 7543
No 361
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.13 E-value=1.7e-10 Score=127.93 Aligned_cols=96 Identities=15% Similarity=0.231 Sum_probs=78.2
Q ss_pred CCCCCCCeEEEEECCC-CCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcE
Q 004998 603 LLNSSNLVCSLSFDRD-GELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVV 681 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~d-g~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~v 681 (720)
+.+|...|.+|+|+|+ +.+||||+.|++|+|||+++.. .......|...|++++|+|+ +++||+|+.||+|
T Consensus 145 ~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~-------~~~~~~~~~~~v~~v~wspd-g~~lasgs~dg~v 216 (434)
T 2oit_A 145 LKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETV-------KVCATLPSTVAVTSVCWSPK-GKQLAVGKQNGTV 216 (434)
T ss_dssp CCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSE-------EEEEEECGGGCEEEEEECTT-SSCEEEEETTSCE
T ss_pred cCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCc-------ceeeccCCCCceeEEEEcCC-CCEEEEEcCCCcE
Confidence 4467899999999998 7899999999999999987651 12233345678999999996 5799999999999
Q ss_pred EEEECCCCcEEE--------------EEEEEeecCCceEE
Q 004998 682 QVGQVLHLIYFS--------------ALYCIVLNKLLIIF 707 (720)
Q Consensus 682 ~lWDv~tg~~~~--------------~v~~v~~~~~~~~~ 707 (720)
++||++ ++... .|.+++|++....+
T Consensus 217 ~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l 255 (434)
T 2oit_A 217 VQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFA 255 (434)
T ss_dssp EEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEE
T ss_pred EEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEE
Confidence 999998 54432 47899999887766
No 362
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.13 E-value=3e-10 Score=124.60 Aligned_cols=106 Identities=9% Similarity=0.113 Sum_probs=87.2
Q ss_pred CCCCCCCeEEEEECCCCC-EEEE--eeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEE--eC
Q 004998 603 LLNSSNLVCSLSFDRDGE-LFAA--AGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASS--NF 677 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~-~lat--~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~--s~ 677 (720)
...|.+.|.+++|+|++. ++|+ |+.|++|+|||+.++ .++..+.+...|.+++|+|+++ .|+++ +.
T Consensus 272 ~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~--------~~~~~~~~~~~v~~~~~~~~~~-~lv~~sg~~ 342 (420)
T 4gga_A 272 FTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSG--------ACLSAVDAHSQVCSILWSPHYK-ELISGHGFA 342 (420)
T ss_dssp ECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTT--------EEEEEEECSSCEEEEEEETTTT-EEEEEECTT
T ss_pred ecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCcc--------ccceeeccccceeeeeecCCCC-eEEEEEecC
Confidence 346788999999999775 5665 457999999998876 3455566677899999999765 55443 36
Q ss_pred CCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceEE
Q 004998 678 EGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 678 D~~v~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
|++|+|||+.+++++.+ |++++|+|.+..+++|+.|+.-.
T Consensus 343 d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvr 389 (420)
T 4gga_A 343 QNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLR 389 (420)
T ss_dssp TCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEE
T ss_pred CCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEE
Confidence 99999999999999987 89999999999999999998544
No 363
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.12 E-value=3e-10 Score=125.62 Aligned_cols=115 Identities=8% Similarity=0.057 Sum_probs=94.0
Q ss_pred hhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCE
Q 004998 581 EGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKL 659 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i 659 (720)
++..+++...+.+.+..+ .+|.+.|.+++|+|+|.+||+|+.|++|+|||+.+. .++..+ .|...|
T Consensus 289 d~~i~vwd~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~--------~~~~~~~~h~~~v 355 (464)
T 3v7d_B 289 DNTLIVWDVAQMKCLYIL-----SGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENG--------ELMYTLQGHTALV 355 (464)
T ss_dssp TSCEEEEETTTTEEEEEE-----CCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTT--------EEEEEECCCSSCE
T ss_pred CCeEEEEECCCCcEEEEe-----cCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCC--------cEEEEEeCCCCcE
Confidence 444555555566666555 456899999999999999999999999999998776 245555 357789
Q ss_pred EEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE------EEEEeecCCceEEEecC
Q 004998 660 SSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA------LYCIVLNKLLIIFRYGM 711 (720)
Q Consensus 660 ~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~------v~~v~~~~~~~~~~~~~ 711 (720)
.+++|++ .+|+|++.||+|++||+.+++.... +.+++|++.+..++.|+
T Consensus 356 ~~~~~~~---~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 410 (464)
T 3v7d_B 356 GLLRLSD---KFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGS 410 (464)
T ss_dssp EEEEECS---SEEEEEETTSEEEEEETTTCCEEEEEECTTCCCEEEEEECSSEEEEEE
T ss_pred EEEEEcC---CEEEEEeCCCcEEEEECCCCceeeeecCCCCccEEEEEeCCCEEEEec
Confidence 9999985 5899999999999999999887665 56789999999999988
No 364
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.12 E-value=2.2e-10 Score=126.87 Aligned_cols=107 Identities=14% Similarity=0.013 Sum_probs=86.3
Q ss_pred CCCCCCCCeEEEEECCCCCEE-EEeeCCCcEEEeeCC--cccccccccccceEEe---cCCCCEEEEEEecCCCCEEEEE
Q 004998 602 DLLNSSNLVCSLSFDRDGELF-AAAGVNKKIKVFECD--AIINENRDIHYPVVEM---ASRSKLSSICWNSYIKSQIASS 675 (720)
Q Consensus 602 ~~~~~~~~V~sv~f~~dg~~l-at~~~d~~i~iwd~~--~~~~~~~~~~~~~~~~---~~~~~i~~v~~~~~~~~~laS~ 675 (720)
.+.+|.+.|.+++|+|||++| |+|+.|++|+|||+. +. .++..+ .+...|++|+|+|+ +.+||+|
T Consensus 97 ~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~--------~~~~~~~~~~~~~~v~~~~~sp~-~~~l~~~ 167 (450)
T 2vdu_B 97 GAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSK--------NVLKLRKRFCFSKRPNAISIAED-DTTVIIA 167 (450)
T ss_dssp ---CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSS--------SCEEEEEEEECSSCEEEEEECTT-SSEEEEE
T ss_pred CCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCC--------ceeeeeecccCCCCceEEEEcCC-CCEEEEE
Confidence 345678899999999999995 999999999999987 43 123333 44678999999996 4699999
Q ss_pred eCCCcEEEEECCCCcEEE----E-------EEEEeecCC---ceEEEecCccceEE
Q 004998 676 NFEGVVQVGQVLHLIYFS----A-------LYCIVLNKL---LIIFRYGMFQEVKY 717 (720)
Q Consensus 676 s~D~~v~lWDv~tg~~~~----~-------v~~v~~~~~---~~~~~~~~~~~~~~ 717 (720)
+.||.|.+||+.+++... . |+|++|+|. +.++++|+.|..-+
T Consensus 168 ~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~ 223 (450)
T 2vdu_B 168 DKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIK 223 (450)
T ss_dssp ETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEE
T ss_pred eCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEE
Confidence 999999999998877542 1 999999999 99999999885433
No 365
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.11 E-value=5.2e-10 Score=122.72 Aligned_cols=102 Identities=11% Similarity=0.200 Sum_probs=85.5
Q ss_pred CCCCeEEEE--ECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec---CCCCEEEEEEecCCCCEEEEEeCCCc
Q 004998 606 SSNLVCSLS--FDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA---SRSKLSSICWNSYIKSQIASSNFEGV 680 (720)
Q Consensus 606 ~~~~V~sv~--f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~---~~~~i~~v~~~~~~~~~laS~s~D~~ 680 (720)
+...+.++. |++|+.+||+|+.|++|+|||+++. .++..+. |.+.|++++|+|+ +.+||+|+.||+
T Consensus 167 ~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~--------~~~~~~~~~~h~~~v~~~~~s~~-~~~l~s~~~dg~ 237 (437)
T 3gre_A 167 KNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTL--------ERLQIIENSPRHGAVSSICIDEE-CCVLILGTTRGI 237 (437)
T ss_dssp SCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTC--------CEEEEEECCGGGCCEEEEEECTT-SCEEEEEETTSC
T ss_pred cccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC--------eeeEEEccCCCCCceEEEEECCC-CCEEEEEcCCCe
Confidence 567788888 6799999999999999999998775 2444443 5678999999996 679999999999
Q ss_pred EEEEECCCCcEEEE--------EEEE----eecCCceEEEecCccceE
Q 004998 681 VQVGQVLHLIYFSA--------LYCI----VLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 681 v~lWDv~tg~~~~~--------v~~v----~~~~~~~~~~~~~~~~~~ 716 (720)
|+|||+++++++.+ |.++ +|++.+.++++|+.|..-
T Consensus 238 i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i 285 (437)
T 3gre_A 238 IDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFL 285 (437)
T ss_dssp EEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEE
T ss_pred EEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcE
Confidence 99999999998875 7888 666778899999988643
No 366
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.10 E-value=6e-10 Score=115.29 Aligned_cols=110 Identities=12% Similarity=0.153 Sum_probs=83.9
Q ss_pred cceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCC
Q 004998 590 SKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIK 669 (720)
Q Consensus 590 ~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~ 669 (720)
..++++.+++ +|.+.|.+|+| |++.+||||+.|++|+|||+.+.. .......+...|.+++|+|+ +
T Consensus 6 ~~~~~~~~l~-----~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~-------~~~~~~~~~~~v~~~~~~~~-~ 71 (313)
T 3odt_A 6 TGYQLSATLK-----GHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQW-------LGTVVYTGQGFLNSVCYDSE-K 71 (313)
T ss_dssp CCCEEEEEEC-----CCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSE-------EEEEEEECSSCEEEEEEETT-T
T ss_pred ccHHHHHHhh-----CCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCE-------EEEEeecCCccEEEEEECCC-C
Confidence 3455666664 46899999999 999999999999999999986541 12223345788999999995 5
Q ss_pred CEEEEEeCCCcEEEEECCCC---cEEEE-------EEEEeecCCceEEEecCccce
Q 004998 670 SQIASSNFEGVVQVGQVLHL---IYFSA-------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 670 ~~laS~s~D~~v~lWDv~tg---~~~~~-------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
.+||+++.||+|++||+... +.+.. |.+++|+ +..+.+|+.|..
T Consensus 72 ~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~d~~ 125 (313)
T 3odt_A 72 ELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSFQ--DGVVISGSWDKT 125 (313)
T ss_dssp TEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEEE--TTEEEEEETTSE
T ss_pred CEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEec--CCEEEEEeCCCC
Confidence 69999999999999998754 33333 8899994 556777776644
No 367
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.10 E-value=2e-10 Score=136.32 Aligned_cols=124 Identities=11% Similarity=0.107 Sum_probs=93.6
Q ss_pred hhhhhhcccc--ceEEeeeeccCCCCCCCCCeEEEEECCC--CCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cC
Q 004998 581 EGLCKYLSFS--KLRVKADLNQGDLLNSSNLVCSLSFDRD--GELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-AS 655 (720)
Q Consensus 581 ~~l~~~~~~~--~~~~~~~l~~~~~~~~~~~V~sv~f~~d--g~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~ 655 (720)
++..++|... +.+.+..+ .+|.+.|.+++|+|+ |.+|||||.|++|+|||+.+... .++..+ .|
T Consensus 30 dg~I~vwd~~~~~~~~~~~l-----~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~------~~~~~~~~h 98 (753)
T 3jro_A 30 DKTIKIFEVEGETHKLIDTL-----TGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRW------SQIAVHAVH 98 (753)
T ss_dssp TTEEEEEEEETTEEEEEEEE-----CCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEE------EEEEEECCC
T ss_pred CCcEEEEecCCCCCccceec-----cCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcc------cccccccCC
Confidence 3444555544 44444444 456899999999988 99999999999999999876410 123333 45
Q ss_pred CCCEEEEEEecCC-CCEEEEEeCCCcEEEEECCCCcEEE---------EEEEEeecC-------------CceEEEecCc
Q 004998 656 RSKLSSICWNSYI-KSQIASSNFEGVVQVGQVLHLIYFS---------ALYCIVLNK-------------LLIIFRYGMF 712 (720)
Q Consensus 656 ~~~i~~v~~~~~~-~~~laS~s~D~~v~lWDv~tg~~~~---------~v~~v~~~~-------------~~~~~~~~~~ 712 (720)
...|++++|+|+. +++|++|+.||+|+|||++++.... .|.+++|+| .+..+++|+-
T Consensus 99 ~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~ 178 (753)
T 3jro_A 99 SASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGA 178 (753)
T ss_dssp SSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEET
T ss_pred CCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEEC
Confidence 7889999999963 6799999999999999999873221 189999999 4788888887
Q ss_pred cce
Q 004998 713 QEV 715 (720)
Q Consensus 713 ~~~ 715 (720)
|-.
T Consensus 179 dg~ 181 (753)
T 3jro_A 179 DNL 181 (753)
T ss_dssp TSC
T ss_pred CCe
Confidence 654
No 368
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.09 E-value=5.1e-10 Score=123.82 Aligned_cols=100 Identities=11% Similarity=0.143 Sum_probs=82.1
Q ss_pred CCCC-CeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCCCcEE
Q 004998 605 NSSN-LVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGVVQ 682 (720)
Q Consensus 605 ~~~~-~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~v~~~~~~~~~laS~s~D~~v~ 682 (720)
+|.+ +|.++.| ++.+|||||.|++|+|||+.+. .++..+ .|.+.|.+++|+|++ +|+||+.||+|+
T Consensus 119 ~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~--------~~~~~~~~h~~~V~~l~~~~~~--~l~s~s~dg~i~ 186 (464)
T 3v7d_B 119 GHMTSVITCLQF--EDNYVITGADDKMIRVYDSINK--------KFLLQLSGHDGGVWALKYAHGG--ILVSGSTDRTVR 186 (464)
T ss_dssp CCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTT--------EEEEEECCCSSCEEEEEECSTT--EEEEEETTSCEE
T ss_pred CCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCC--------cEEEEEeCCCcCEEEEEEcCCC--EEEEEeCCCCEE
Confidence 3444 4677777 5689999999999999998776 244444 358899999999854 999999999999
Q ss_pred EEECCCCcEEEE-------EEEEeec--CCceEEEecCccceE
Q 004998 683 VGQVLHLIYFSA-------LYCIVLN--KLLIIFRYGMFQEVK 716 (720)
Q Consensus 683 lWDv~tg~~~~~-------v~~v~~~--~~~~~~~~~~~~~~~ 716 (720)
|||+.+++++.+ |.|++|+ +.+..+.+|+.|..-
T Consensus 187 vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i 229 (464)
T 3v7d_B 187 VWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTL 229 (464)
T ss_dssp EEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCE
T ss_pred EEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcE
Confidence 999999998876 8899998 577889999887644
No 369
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.08 E-value=2.9e-10 Score=120.91 Aligned_cols=97 Identities=5% Similarity=0.059 Sum_probs=70.3
Q ss_pred CCCeEEEEECCC----CCEEEEeeC--------------------CCcEEEeeCCcccccccccccceEEecCCCCEEEE
Q 004998 607 SNLVCSLSFDRD----GELFAAAGV--------------------NKKIKVFECDAIINENRDIHYPVVEMASRSKLSSI 662 (720)
Q Consensus 607 ~~~V~sv~f~~d----g~~lat~~~--------------------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v 662 (720)
.+.|++|+|+|| ++++|++|. |++|++|++... .........+...++.+
T Consensus 111 ~~~v~sla~spd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~d------G~~~~s~~~~~~~v~~l 184 (356)
T 2w18_A 111 IREIRALFCSSDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAED------GGGKENQFLMPPEETIL 184 (356)
T ss_dssp EEEEEEECC------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTT------SCEEEEEEECCCSSCEE
T ss_pred ccceEEEEECCCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCC------CceeeeeccCCCceeeE
Confidence 357899999999 888888774 777777776431 01111222446678888
Q ss_pred EEec--CCCCEEEEEeCCCcEEEEECCCCcEEEEE----------EEEeecCCceEEEe
Q 004998 663 CWNS--YIKSQIASSNFEGVVQVGQVLHLIYFSAL----------YCIVLNKLLIIFRY 709 (720)
Q Consensus 663 ~~~~--~~~~~laS~s~D~~v~lWDv~tg~~~~~v----------~~v~~~~~~~~~~~ 709 (720)
+|+| .++..|||+|+|++|||||+.||++++++ .+++|+|.+..+++
T Consensus 185 ~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs 243 (356)
T 2w18_A 185 TFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIV 243 (356)
T ss_dssp EEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEE
T ss_pred EeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEE
Confidence 8888 24579999999999999999999999874 46789999998744
No 370
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.07 E-value=1.3e-09 Score=113.21 Aligned_cols=122 Identities=12% Similarity=0.164 Sum_probs=96.9
Q ss_pred hhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCE
Q 004998 581 EGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKL 659 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i 659 (720)
+.-.++|...+.+++..++ +.+|...|.+|+|+|+|++|||||.|++|+|||+.+. .++..+ .|...+
T Consensus 44 D~tV~iWd~~tg~~~~~~~---~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~--------~~~~~~~~h~~~~ 112 (318)
T 4ggc_A 44 DNSVYLWSASSGDILQLLQ---MEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQ--------KRLRNMTSHSARV 112 (318)
T ss_dssp TTEEEEEETTTCCEEEEEE---CCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTT--------EEEEEEECCSSCE
T ss_pred CCEEEEEECCCCCEEEEEE---ecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCc--------eeEEEecCccceE
Confidence 4456777777777777665 2367889999999999999999999999999998876 234444 346667
Q ss_pred EEEEEecCCCCEEEEEeCCCcEEEEECCCCcEE-EE-------EEEEeecCCceEEEecCccceE
Q 004998 660 SSICWNSYIKSQIASSNFEGVVQVGQVLHLIYF-SA-------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 660 ~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~-~~-------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
.++++++ ..|+|++.|+.+++|+..++... .+ +.++.|++.+..+.+|+.|..-
T Consensus 113 ~~~~~~~---~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i 174 (318)
T 4ggc_A 113 GSLSWNS---YILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLV 174 (318)
T ss_dssp EEEEEET---TEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred EEeecCC---CEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcce
Confidence 7777664 58999999999999999887543 32 7899999999999999988643
No 371
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.07 E-value=7.4e-10 Score=119.26 Aligned_cols=103 Identities=13% Similarity=0.142 Sum_probs=87.5
Q ss_pred CCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec----C---CCCEEEEEEecCCCCEEEEEeC
Q 004998 605 NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA----S---RSKLSSICWNSYIKSQIASSNF 677 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~----~---~~~i~~v~~~~~~~~~laS~s~ 677 (720)
.|...|.+++|+|+| +||+|+.|++|+|||+++. .++..+. | ...|.+++|+|+ +.+||+++.
T Consensus 184 ~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~--------~~~~~~~~~~~h~~~~~~i~~i~~~~~-~~~l~~~~~ 253 (397)
T 1sq9_A 184 TPSQFATSVDISERG-LIATGFNNGTVQISELSTL--------RPLYNFESQHSMINNSNSIRSVKFSPQ-GSLLAIAHD 253 (397)
T ss_dssp SSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTT--------EEEEEEECCC---CCCCCEEEEEECSS-TTEEEEEEE
T ss_pred CCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCC--------ceeEEEeccccccccCCccceEEECCC-CCEEEEEec
Confidence 468899999999999 9999999999999998765 2444444 4 778999999996 569999999
Q ss_pred C---CcEEEEECCCCcEEEE--------------------EEEEeecCCceEEEecCccceEE
Q 004998 678 E---GVVQVGQVLHLIYFSA--------------------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 678 D---~~v~lWDv~tg~~~~~--------------------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
| |+|+|||+++++.+.+ |++++|+|.+.++.+|+.|..-+
T Consensus 254 d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~ 316 (397)
T 1sq9_A 254 SNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLR 316 (397)
T ss_dssp ETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEE
T ss_pred CCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEE
Confidence 9 9999999999987653 67899999999999998876433
No 372
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.06 E-value=1.2e-09 Score=117.47 Aligned_cols=105 Identities=10% Similarity=0.045 Sum_probs=89.2
Q ss_pred CCCCCCCeEEEEECC-CCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCC--CEEEEEeCCC
Q 004998 603 LLNSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIK--SQIASSNFEG 679 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~-dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~--~~laS~s~D~ 679 (720)
..+|...|.+++|+| ++.+||+|+.|++|+|||+.+. .++..+.+...+.+++|+|... .+|++++.||
T Consensus 95 ~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (408)
T 4a11_B 95 PDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTL--------QTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGP 166 (408)
T ss_dssp TTCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTT--------EEEEEEECSSCEEEEEECSSCSSCCEEEEEESSS
T ss_pred cccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCC--------ccceeccCCCceeeeEeecCCCCCcEEEEEcCCC
Confidence 456899999999999 7789999999999999998775 2455556678899999998643 3999999999
Q ss_pred cEEEEECCCCcEEEE-------EEEEeecCCce-EEEecCccce
Q 004998 680 VVQVGQVLHLIYFSA-------LYCIVLNKLLI-IFRYGMFQEV 715 (720)
Q Consensus 680 ~v~lWDv~tg~~~~~-------v~~v~~~~~~~-~~~~~~~~~~ 715 (720)
.|++||+++++.+.. |.|++|+|.+. ++++|+.|-.
T Consensus 167 ~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~ 210 (408)
T 4a11_B 167 KVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSR 210 (408)
T ss_dssp SEEEEESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSC
T ss_pred eEEEEeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCc
Confidence 999999999987765 89999999998 5778877654
No 373
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.05 E-value=2.2e-10 Score=120.66 Aligned_cols=97 Identities=10% Similarity=0.135 Sum_probs=80.5
Q ss_pred CCCCCeEEEEECCCCC-EEEEeeCCCcEEEeeC-CcccccccccccceEEec--CCCCEEEEEEecCCCCEEEEEeCCCc
Q 004998 605 NSSNLVCSLSFDRDGE-LFAAAGVNKKIKVFEC-DAIINENRDIHYPVVEMA--SRSKLSSICWNSYIKSQIASSNFEGV 680 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~-~lat~~~d~~i~iwd~-~~~~~~~~~~~~~~~~~~--~~~~i~~v~~~~~~~~~laS~s~D~~ 680 (720)
+|...|.+++|+|+|+ +||+|+.|++|+|||+ .+.. ...... |...|.+++|+| +++|++++.|++
T Consensus 54 ~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~--------~~~~~~~~~~~~v~~l~~~~--~~~l~s~~~d~~ 123 (342)
T 1yfq_A 54 RYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPS--------FQALTNNEANLGICRICKYG--DDKLIAASWDGL 123 (342)
T ss_dssp ECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSS--------EEECBSCCCCSCEEEEEEET--TTEEEEEETTSE
T ss_pred ecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCc--------eEeccccCCCCceEEEEeCC--CCEEEEEcCCCe
Confidence 5688999999999999 9999999999999998 6652 122223 677899999999 579999999999
Q ss_pred EEEEECCC---------CcEEEE------EEEEeecCCceEEEecCcc
Q 004998 681 VQVGQVLH---------LIYFSA------LYCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 681 v~lWDv~t---------g~~~~~------v~~v~~~~~~~~~~~~~~~ 713 (720)
|++||+++ ++++.+ +++++|++.+ +..|+.|
T Consensus 124 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--l~~~~~d 169 (342)
T 1yfq_A 124 IEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSR--LIVGMNN 169 (342)
T ss_dssp EEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSE--EEEEEST
T ss_pred EEEEcccccccccccccCCeeeEEeeCCceEEEEecCCc--EEEEeCC
Confidence 99999988 765543 8999999988 5555555
No 374
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.04 E-value=1.4e-09 Score=119.86 Aligned_cols=116 Identities=9% Similarity=0.182 Sum_probs=91.6
Q ss_pred hhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec----CC
Q 004998 581 EGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA----SR 656 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~----~~ 656 (720)
++..+++...+.+.+..+. +|...|.++++ ++.+|++|+.|++|+|||+.+. .++..+. +.
T Consensus 298 d~~i~i~d~~~~~~~~~~~-----~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~--------~~~~~~~~~~~~~ 362 (445)
T 2ovr_B 298 DTSIRVWDVETGNCIHTLT-----GHQSLTSGMEL--KDNILVSGNADSTVKIWDIKTG--------QCLQTLQGPNKHQ 362 (445)
T ss_dssp TSCEEEEETTTCCEEEEEC-----CCCSCEEEEEE--ETTEEEEEETTSCEEEEETTTC--------CEEEEECSTTSCS
T ss_pred CCeEEEEECCCCCEEEEEc-----CCcccEEEEEE--eCCEEEEEeCCCeEEEEECCCC--------cEEEEEccCCCCC
Confidence 3344555555555555554 45788888887 4679999999999999998765 2344443 56
Q ss_pred CCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE------------EEEEeecCCceEEEecCccc
Q 004998 657 SKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA------------LYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 657 ~~i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~------------v~~v~~~~~~~~~~~~~~~~ 714 (720)
..|.+++|++ ++||+|+.||+|+|||+.+|+.+.+ |++++|+|.+..++.|+.|.
T Consensus 363 ~~v~~~~~~~---~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg 429 (445)
T 2ovr_B 363 SAVTCLQFNK---NFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNG 429 (445)
T ss_dssp SCEEEEEECS---SEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSS
T ss_pred CCEEEEEECC---CEEEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCC
Confidence 7899999975 5899999999999999999998764 79999999999999999886
No 375
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.02 E-value=2.2e-09 Score=115.59 Aligned_cols=117 Identities=8% Similarity=-0.005 Sum_probs=90.8
Q ss_pred hhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEE-EEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEE
Q 004998 584 CKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELF-AAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSI 662 (720)
Q Consensus 584 ~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~l-at~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v 662 (720)
.+.+...+.+++..+.+ ...|.+++|+|||+++ ++++.|++|++||+.+. ..+..+.+...+.++
T Consensus 14 v~v~d~~~~~~~~~~~~------~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~--------~~~~~~~~~~~v~~~ 79 (391)
T 1l0q_A 14 ISVIDVTSNKVTATIPV------GSNPMGAVISPDGTKVYVANAHSNDVSIIDTATN--------NVIATVPAGSSPQGV 79 (391)
T ss_dssp EEEEETTTTEEEEEEEC------SSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTT--------EEEEEEECSSSEEEE
T ss_pred EEEEECCCCeEEEEeec------CCCcceEEECCCCCEEEEECCCCCeEEEEECCCC--------eEEEEEECCCCccce
Confidence 45555566677777763 2348999999999975 78889999999998765 244555556689999
Q ss_pred EEecCCCCEEEEEeCCCcEEEEECCCCcEEEE------EEEEeecCCceEE-EecCccc
Q 004998 663 CWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA------LYCIVLNKLLIIF-RYGMFQE 714 (720)
Q Consensus 663 ~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~------v~~v~~~~~~~~~-~~~~~~~ 714 (720)
+|+|+++.++++++.|++|++||+.+++.+.. +.+++|++.+..+ ..++-|.
T Consensus 80 ~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~ 138 (391)
T 1l0q_A 80 AVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDK 138 (391)
T ss_dssp EECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTT
T ss_pred EECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCCCCcceEEECCCCCEEEEEeCCCC
Confidence 99997654446666789999999999998876 7899999999865 6666554
No 376
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=98.99 E-value=3.2e-09 Score=121.00 Aligned_cols=119 Identities=13% Similarity=0.158 Sum_probs=94.5
Q ss_pred hhhhhhccccceEEeeeeccCCCCCCCC---CeEEEEECCC-CCEEEEeeCCCcEEEeeCCcccccccccccceEEe---
Q 004998 581 EGLCKYLSFSKLRVKADLNQGDLLNSSN---LVCSLSFDRD-GELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM--- 653 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~---~V~sv~f~~d-g~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~--- 653 (720)
++..++|...+.+.+..++ +|.. .|.+++|+|+ |++||+|+.|++|+|||+.+. .++..+
T Consensus 182 d~~v~vwd~~~~~~~~~~~-----~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~--------~~~~~~~~~ 248 (615)
T 1pgu_A 182 DGSVVFYQGPPFKFSASDR-----THHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSG--------EFLKYIEDD 248 (615)
T ss_dssp TTEEEEEETTTBEEEEEEC-----SSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTC--------CEEEECCBT
T ss_pred CCcEEEEeCCCcceeeeec-----ccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCC--------CEeEEeccc
Confidence 3455666667777777775 3466 8999999999 999999999999999998765 245555
Q ss_pred --cCCCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-----------EEEEeecCCceEEEecCccce
Q 004998 654 --ASRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-----------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 654 --~~~~~i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~-----------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
.+...|.+++|+ ++.+|++++.||+|++||+++++++.+ +.++.|+ .+..+..|+.|..
T Consensus 249 ~~~~~~~v~~~~~~--~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~g~ 320 (615)
T 1pgu_A 249 QEPVQGGIFALSWL--DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVAT-GNGRIISLSLDGT 320 (615)
T ss_dssp TBCCCSCEEEEEES--SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEE-ETTEEEEEETTSC
T ss_pred ccccCCceEEEEEc--CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeC-CCCeEEEEECCCC
Confidence 567889999999 467999999999999999999998876 4566775 6666777766543
No 377
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.95 E-value=5.3e-09 Score=115.11 Aligned_cols=96 Identities=11% Similarity=0.137 Sum_probs=78.8
Q ss_pred CCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCCCcEEE
Q 004998 605 NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGVVQV 683 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~v~~~~~~~~~laS~s~D~~v~l 683 (720)
+|...|.+++| ||++||+|+.|++|+|||+.+. .++..+ .|...|.+++|+ +++||||+.||+|+|
T Consensus 131 ~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~--------~~~~~~~~h~~~v~~l~~~---~~~l~sg~~dg~i~v 197 (435)
T 1p22_A 131 ETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTL--------ECKRILTGHTGSVLCLQYD---ERVIITGSSDSTVRV 197 (435)
T ss_dssp SSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSC--------CEEEEECCCSSCEEEEECC---SSEEEEEETTSCEEE
T ss_pred CCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCC--------eEEEEEcCCCCcEEEEEEC---CCEEEEEcCCCeEEE
Confidence 45678999988 7999999999999999998765 233344 457789999993 469999999999999
Q ss_pred EECCCCcEEEE-------EEEEeecCCceEEEecCccce
Q 004998 684 GQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 684 WDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
||+.+|+++.+ |.+++|++. .+++|+.|..
T Consensus 198 wd~~~~~~~~~~~~h~~~v~~l~~~~~--~l~s~s~dg~ 234 (435)
T 1p22_A 198 WDVNTGEMLNTLIHHCEAVLHLRFNNG--MMVTCSKDRS 234 (435)
T ss_dssp EESSSCCEEEEECCCCSCEEEEECCTT--EEEEEETTSC
T ss_pred EECCCCcEEEEEcCCCCcEEEEEEcCC--EEEEeeCCCc
Confidence 99999999876 899999854 6777776654
No 378
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.94 E-value=6.6e-09 Score=114.31 Aligned_cols=98 Identities=13% Similarity=0.218 Sum_probs=82.7
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCEEEEEEecCCCCEEEEEeCCCcE
Q 004998 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFEGVV 681 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~v~~~~~~~~~laS~s~D~~v 681 (720)
+.+|...|.+++| +|++||+|+.|++|+|||+.+. .++..+. +...|.+++|++ ++|++|+.||+|
T Consensus 252 ~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~--------~~~~~~~~~~~~v~~~~~~~---~~l~~g~~dg~i 318 (435)
T 1p22_A 252 LVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTC--------EFVRTLNGHKRGIACLQYRD---RLVVSGSSDNTI 318 (435)
T ss_dssp ECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTC--------CEEEEEECCSSCEEEEEEET---TEEEEEETTSCE
T ss_pred ecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcC--------cEEEEEcCCCCcEEEEEeCC---CEEEEEeCCCeE
Confidence 4577899999999 8899999999999999998775 2444443 577899999964 599999999999
Q ss_pred EEEECCCCcEEEE-------EEEEeecCCceEEEecCccce
Q 004998 682 QVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 682 ~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
+|||+++|+++.+ |.|++| .+..+++|+.|..
T Consensus 319 ~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~sg~~dg~ 357 (435)
T 1p22_A 319 RLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGK 357 (435)
T ss_dssp EEEETTTCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSC
T ss_pred EEEECCCCCEEEEEeCCcCcEEEEEe--cCCEEEEEeCCCc
Confidence 9999999999887 889999 5667888887753
No 379
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.94 E-value=5.6e-09 Score=115.04 Aligned_cols=115 Identities=10% Similarity=0.120 Sum_probs=89.6
Q ss_pred hhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCE
Q 004998 581 EGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKL 659 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i 659 (720)
++..+.|...+.+.+..++ +|.+.|.+++|+ +.+|||||.|++|+|||+.+. .++..+ .|...|
T Consensus 138 dg~i~vwd~~~~~~~~~~~-----~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~--------~~~~~~~~h~~~v 202 (445)
T 2ovr_B 138 DNTLKVWSAVTGKCLRTLV-----GHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETG--------ECIHTLYGHTSTV 202 (445)
T ss_dssp TSCEEEEETTTCCEEEECC-----CCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTT--------EEEEEECCCSSCE
T ss_pred CCcEEEEECCCCcEEEEEc-----CCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcC--------cEEEEECCCCCcE
Confidence 4455666666666666554 568999999997 679999999999999998775 234444 357789
Q ss_pred EEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccce
Q 004998 660 SSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 660 ~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
.+++|++ +.|++|+.||+|++||+.+++++.. |.|++| .+..+++|+.|..
T Consensus 203 ~~~~~~~---~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~ 260 (445)
T 2ovr_B 203 RCMHLHE---KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFM 260 (445)
T ss_dssp EEEEEET---TEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSC
T ss_pred EEEEecC---CEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCE
Confidence 9999975 5799999999999999999998876 788998 4566777766643
No 380
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=98.94 E-value=2.8e-09 Score=116.36 Aligned_cols=120 Identities=10% Similarity=0.027 Sum_probs=93.3
Q ss_pred hhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEE
Q 004998 585 KYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSIC 663 (720)
Q Consensus 585 ~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~v~ 663 (720)
..+...+.+++..+..+.+.+|...|.+++|+|+|.++++++.|++|++||+.+. .++..+ .+...+.+++
T Consensus 147 ~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~--------~~~~~~~~~~~~~~~~~ 218 (433)
T 3bws_A 147 DVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTL--------AYKATVDLTGKWSKILL 218 (433)
T ss_dssp EEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTC--------CEEEEEECSSSSEEEEE
T ss_pred EEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCc--------eEEEEEcCCCCCeeEEE
Confidence 3444444555544444455678899999999999999999999999999998765 233333 3466899999
Q ss_pred EecCCCCEEEEEeCCCcEEEEECCCCcEEEE------EEEEeecCCceEEEecCc
Q 004998 664 WNSYIKSQIASSNFEGVVQVGQVLHLIYFSA------LYCIVLNKLLIIFRYGMF 712 (720)
Q Consensus 664 ~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~------v~~v~~~~~~~~~~~~~~ 712 (720)
|+|++..++++++.|++|++||+.+++.+.. +.+++|+|.+..+..++.
T Consensus 219 ~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~ 273 (433)
T 3bws_A 219 YDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKIGLPRGLLLSKDGKELYIAQF 273 (433)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTTTEEEEECCCCSEEEEEEECTTSSEEEEEEE
T ss_pred EcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCCCCceEEEEcCCCCEEEEEEC
Confidence 9997654446777899999999999998876 789999999988777664
No 381
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=98.91 E-value=2e-10 Score=124.42 Aligned_cols=90 Identities=7% Similarity=0.063 Sum_probs=64.7
Q ss_pred CCCCCceecccceeecCC--CCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCC
Q 004998 74 GDHLRNQGGLSGVCENEA--AIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPS 150 (720)
Q Consensus 74 l~HpnIV~l~~~~~~~~~--~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~ 150 (720)
..|+|+++++........ .....++|||| .|.+|.+++. . .++..++.||+.+|.|||++|||||||||.
T Consensus 162 kE~~nL~rL~~~gv~vp~p~~~~~~~LVME~i~G~~L~~l~~-----~--~~~~~l~~qll~~l~~lH~~gIVHrDLKp~ 234 (397)
T 4gyi_A 162 KEFAFMKALYEEGFPVPEPIAQSRHTIVMSLVDALPMRQVSS-----V--PDPASLYADLIALILRLAKHGLIHGDFNEF 234 (397)
T ss_dssp HHHHHHHHHHHTTCSCCCEEEEETTEEEEECCSCEEGGGCCC-----C--SCHHHHHHHHHHHHHHHHHTTEECSCCSTT
T ss_pred HHHHHHHHHHhcCCCCCeeeeccCceEEEEecCCccHhhhcc-----c--HHHHHHHHHHHHHHHHHHHCCCcCCCCCHH
Confidence 346666666552221110 00112699999 8888876431 1 235678999999999999999999999999
Q ss_pred cEEEccCC----------ceEEeccCcccC
Q 004998 151 CFVMSSFN----------HVSFIESASCSD 170 (720)
Q Consensus 151 NILl~~~~----------~vkliDfg~a~~ 170 (720)
|||++.++ .+.||||+.+..
T Consensus 235 NILl~~dgd~~d~~~~~~~~~iID~~Q~V~ 264 (397)
T 4gyi_A 235 NILIREEKDAEDPSSITLTPIIIXFPQMVS 264 (397)
T ss_dssp SEEEEEEECSSCTTSEEEEEEECCCTTCEE
T ss_pred HEEEeCCCCcccccccccceEEEEeCCccc
Confidence 99999877 389999998744
No 382
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=98.91 E-value=1.3e-08 Score=109.45 Aligned_cols=119 Identities=8% Similarity=-0.028 Sum_probs=91.9
Q ss_pred hhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEE-EEeeCCCcEEEeeCCcccccccccccceEEecCCCCEE
Q 004998 582 GLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELF-AAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLS 660 (720)
Q Consensus 582 ~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~l-at~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~ 660 (720)
+..+++...+.+++..+.+ ...|.+++|+|||++| ++++.|++|++||+.+. ..+..+.+...+.
T Consensus 54 ~~i~v~d~~~~~~~~~~~~------~~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~--------~~~~~~~~~~~~~ 119 (391)
T 1l0q_A 54 NDVSIIDTATNNVIATVPA------GSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSN--------TVAGTVKTGKSPL 119 (391)
T ss_dssp TEEEEEETTTTEEEEEEEC------SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTT--------EEEEEEECSSSEE
T ss_pred CeEEEEECCCCeEEEEEEC------CCCccceEECCCCCEEEEEECCCCEEEEEECCCC--------eEEEEEeCCCCcc
Confidence 3445566667777777764 2489999999999976 45557799999998775 2344555567899
Q ss_pred EEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE------EEEEeecCCceEE-EecCccc
Q 004998 661 SICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA------LYCIVLNKLLIIF-RYGMFQE 714 (720)
Q Consensus 661 ~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~------v~~v~~~~~~~~~-~~~~~~~ 714 (720)
+++|+|+++.++++++.|++|++||+.+++.+.. +.+++|++.+..+ ..++-|.
T Consensus 120 ~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~ 180 (391)
T 1l0q_A 120 GLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSM 180 (391)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTTT
T ss_pred eEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCCCcceEEECCCCCEEEEEeCCCC
Confidence 9999997654447899999999999999998876 6799999999765 6666553
No 383
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=98.86 E-value=1.1e-08 Score=112.43 Aligned_cols=100 Identities=9% Similarity=-0.089 Sum_probs=80.0
Q ss_pred CCCCCeEEEEECCCCCEEEEeeCCC---cEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEE-EEeCCCc
Q 004998 605 NSSNLVCSLSFDRDGELFAAAGVNK---KIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIA-SSNFEGV 680 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~~lat~~~d~---~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~la-S~s~D~~ 680 (720)
+|...|.+++|+|||++||+++.|+ +|++||+.++. +.....+...+.+++|+|+++ .|| +++.|+.
T Consensus 176 ~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~--------~~~l~~~~~~~~~~~~spdg~-~la~~~~~~g~ 246 (415)
T 2hqs_A 176 RSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGA--------VRQVASFPRHNGAPAFSPDGS-KLAFALSKTGS 246 (415)
T ss_dssp EESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCC--------EEEEECCSSCEEEEEECTTSS-EEEEEECTTSS
T ss_pred CCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCc--------EEEeecCCCcccCEEEcCCCC-EEEEEEecCCC
Confidence 3478899999999999999999886 99999988752 222334466899999999765 566 7777765
Q ss_pred --EEEEECCCCcEEEE------EEEEeecCCceEEEecCcc
Q 004998 681 --VQVGQVLHLIYFSA------LYCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 681 --v~lWDv~tg~~~~~------v~~v~~~~~~~~~~~~~~~ 713 (720)
|.+||+.+++.... +.+++|+|.+..+.+++-+
T Consensus 247 ~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdg~~l~~~s~~ 287 (415)
T 2hqs_A 247 LNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQ 287 (415)
T ss_dssp CEEEEEETTTCCEEECCCCSSCEEEEEECTTSSEEEEEECT
T ss_pred ceEEEEECCCCCEEeCcCCCCcccceEECCCCCEEEEEECC
Confidence 99999999886432 8899999999988887753
No 384
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=98.72 E-value=5.4e-08 Score=106.09 Aligned_cols=115 Identities=10% Similarity=-0.018 Sum_probs=88.6
Q ss_pred hhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEee--------CCCcEEEeeCCcccccccccccceEEecCC
Q 004998 585 KYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAG--------VNKKIKVFECDAIINENRDIHYPVVEMASR 656 (720)
Q Consensus 585 ~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~--------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~ 656 (720)
..+...+.+++..+.. ...+.+++|+|||++|++++ .|++|++||+.+. ..+..+.+.
T Consensus 237 ~~~d~~~~~~~~~~~~------~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~--------~~~~~~~~~ 302 (433)
T 3bws_A 237 SVIDRKTKLEIRKTDK------IGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKE--------KLIDTIGPP 302 (433)
T ss_dssp EEEETTTTEEEEECCC------CSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTT--------EEEEEEEEE
T ss_pred EEEECCCCcEEEEecC------CCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCC--------cEEeeccCC
Confidence 4444455566666653 24599999999999999988 4899999998765 233344444
Q ss_pred CCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE------EEEEeecCCceEEEecCcc
Q 004998 657 SKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA------LYCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 657 ~~i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~------v~~v~~~~~~~~~~~~~~~ 713 (720)
..+.+++|+|+++.++++++.|++|++||+.+++.+.. +.+++|++.+..+..++.+
T Consensus 303 ~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~ 365 (433)
T 3bws_A 303 GNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIPVFDKPNTIALSPDGKYLYVSCRG 365 (433)
T ss_dssp ECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEECC
T ss_pred CCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEecCCCCCCeEEEcCCCCEEEEEecC
Confidence 57899999998766778889999999999999988776 7899999999866665543
No 385
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=98.54 E-value=3.3e-07 Score=100.55 Aligned_cols=101 Identities=12% Similarity=-0.065 Sum_probs=75.2
Q ss_pred CCCCCCeEEEEECCCCCEEE-EeeCCCc--EEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeC-CC
Q 004998 604 LNSSNLVCSLSFDRDGELFA-AAGVNKK--IKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNF-EG 679 (720)
Q Consensus 604 ~~~~~~V~sv~f~~dg~~la-t~~~d~~--i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~-D~ 679 (720)
.+|...|.+++|+|||++|| +++.|+. |++||+.+.. +.....+...+.+++|+|++ .+||+++. |+
T Consensus 219 ~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~--------~~~l~~~~~~~~~~~~spdg-~~l~~~s~~~g 289 (415)
T 2hqs_A 219 ASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQ--------IRQVTDGRSNNTEPTWFPDS-QNLAFTSDQAG 289 (415)
T ss_dssp ECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCC--------EEECCCCSSCEEEEEECTTS-SEEEEEECTTS
T ss_pred ecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCC--------EEeCcCCCCcccceEECCCC-CEEEEEECCCC
Confidence 34567899999999999888 7766655 9999987651 11222345679999999975 56776665 56
Q ss_pred --cEEEEECCCCcEEE------EEEEEeecCCceEEEecCcc
Q 004998 680 --VVQVGQVLHLIYFS------ALYCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 680 --~v~lWDv~tg~~~~------~v~~v~~~~~~~~~~~~~~~ 713 (720)
.|.+||+.+++... .+.+++|+|.+..+.+++.+
T Consensus 290 ~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdG~~l~~~~~~ 331 (415)
T 2hqs_A 290 RPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSN 331 (415)
T ss_dssp SCEEEEEETTSSCCEECCCSSSEEEEEEECTTSSEEEEEEEC
T ss_pred CcEEEEEECCCCCEEEEecCCCcccCeEECCCCCEEEEEECc
Confidence 56667999887543 17899999999999888765
No 386
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=98.49 E-value=1.3e-06 Score=99.57 Aligned_cols=96 Identities=8% Similarity=0.030 Sum_probs=75.8
Q ss_pred hhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeC--CcccccccccccceEEecCCCCEEEE
Q 004998 585 KYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFEC--DAIINENRDIHYPVVEMASRSKLSSI 662 (720)
Q Consensus 585 ~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~--~~~~~~~~~~~~~~~~~~~~~~i~~v 662 (720)
..+.-.+.+++.++.. ++. +.+++|+|||++|++++.|++|++||+ .+. ..+..+.+......|
T Consensus 162 ~v~D~~t~~~~~~i~~----g~~--~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~--------~~~~~i~~g~~p~~v 227 (543)
T 1nir_A 162 ALVDGDSKKIVKVIDT----GYA--VHISRMSASGRYLLVIGRDARIDMIDLWAKEP--------TKVAEIKIGIEARSV 227 (543)
T ss_dssp EEEETTTCCEEEEEEC----STT--EEEEEECTTSCEEEEEETTSEEEEEETTSSSC--------EEEEEEECCSEEEEE
T ss_pred EEEECCCceEEEEEec----Ccc--cceEEECCCCCEEEEECCCCeEEEEECcCCCC--------cEEEEEecCCCcceE
Confidence 4445566777777763 122 899999999999999999999999998 554 244555556678999
Q ss_pred EEec----CCCCEEEEEeC-CCcEEEEECCCCcEEEEE
Q 004998 663 CWNS----YIKSQIASSNF-EGVVQVGQVLHLIYFSAL 695 (720)
Q Consensus 663 ~~~~----~~~~~laS~s~-D~~v~lWDv~tg~~~~~v 695 (720)
+|+| ++ .+|+++++ |++|+|||..|+++++++
T Consensus 228 a~sp~~~~dg-~~l~v~~~~~~~v~v~D~~t~~~~~~i 264 (543)
T 1nir_A 228 ESSKFKGYED-RYTIAGAYWPPQFAIMDGETLEPKQIV 264 (543)
T ss_dssp EECCSTTCTT-TEEEEEEEESSEEEEEETTTCCEEEEE
T ss_pred EeCCCcCCCC-CEEEEEEccCCeEEEEeccccccceee
Confidence 9999 65 58888885 899999999999988764
No 387
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=98.41 E-value=9.4e-07 Score=108.51 Aligned_cols=101 Identities=15% Similarity=0.105 Sum_probs=80.1
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCCC--
Q 004998 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEG-- 679 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~v~~~~~~~~~laS~s~D~-- 679 (720)
+.+|...|.+++|+|||++||+++.+++|++||+.++. ..... .+...|.+++|+|++ .+||+++.++
T Consensus 374 l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~--------~~~~~~~~~~~v~~~~~SpDG-~~la~~~~~~~~ 444 (1045)
T 1k32_A 374 FEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGK--------PTVIERSREAMITDFTISDNS-RFIAYGFPLKHG 444 (1045)
T ss_dssp CCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCC--------EEEEEECSSSCCCCEEECTTS-CEEEEEEEECSS
T ss_pred ecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCc--------eEEeccCCCCCccceEECCCC-CeEEEEecCccc
Confidence 34667889999999999999999999999999987752 22222 356678999999965 5788777654
Q ss_pred --------cEEEEECCCCcEEEE------EEEEeecCCceEEEecCc
Q 004998 680 --------VVQVGQVLHLIYFSA------LYCIVLNKLLIIFRYGMF 712 (720)
Q Consensus 680 --------~v~lWDv~tg~~~~~------v~~v~~~~~~~~~~~~~~ 712 (720)
+|++||+.+|+.... +.+++|++.+..+.+++-
T Consensus 445 ~~~~~~~~~i~l~d~~~g~~~~l~~~~~~~~~~~~spdG~~l~~~s~ 491 (1045)
T 1k32_A 445 ETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSY 491 (1045)
T ss_dssp TTCSCCEEEEEEEETTTTEEEECSCSSSBEEEEEECTTSCEEEEEES
T ss_pred cccCCCCCeEEEEECCCCcEEEeeCCCcccCCceEcCCCCEEEEEec
Confidence 999999999883321 788999999998877664
No 388
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=98.39 E-value=7.8e-07 Score=92.89 Aligned_cols=107 Identities=10% Similarity=-0.013 Sum_probs=75.0
Q ss_pred ceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCC-CcEEEeeCC--cccccccccccceEEecCCCCEEEEEEecC
Q 004998 591 KLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVN-KKIKVFECD--AIINENRDIHYPVVEMASRSKLSSICWNSY 667 (720)
Q Consensus 591 ~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d-~~i~iwd~~--~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~ 667 (720)
+++++..+.+ ...+.+++|+|||++|++++.+ ++|++||+. +.. ...+..+.....+.+++|+|+
T Consensus 27 ~~~~~~~~~~------~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~s~d 94 (343)
T 1ri6_A 27 ALTLTQVVDV------PGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGA------LTFAAESALPGSLTHISTDHQ 94 (343)
T ss_dssp CEEEEEEEEC------SSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCC------EEEEEEEECSSCCSEEEECTT
T ss_pred cEEEeeeEec------CCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCc------eeeccccccCCCCcEEEEcCC
Confidence 3455555544 5678899999999998888876 999999986 221 013334444447899999997
Q ss_pred CCCEEEEEe-CCCcEEEEEC---CCCcEEEE------EEEEeecCCceEEEec
Q 004998 668 IKSQIASSN-FEGVVQVGQV---LHLIYFSA------LYCIVLNKLLIIFRYG 710 (720)
Q Consensus 668 ~~~~laS~s-~D~~v~lWDv---~tg~~~~~------v~~v~~~~~~~~~~~~ 710 (720)
+. +|+.++ .|++|.+||+ .+++.+.. +.+++|+|.+..+..+
T Consensus 95 g~-~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~ 146 (343)
T 1ri6_A 95 GQ-FVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVP 146 (343)
T ss_dssp SS-EEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEE
T ss_pred CC-EEEEEecCCCeEEEEECCCCccccccccccCCCCceEEEECCCCCEEEEe
Confidence 54 565555 5899999999 44444444 6788999998755443
No 389
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.37 E-value=1.9e-06 Score=87.31 Aligned_cols=99 Identities=9% Similarity=-0.029 Sum_probs=73.2
Q ss_pred CCeEEEEECCCCCEEE-EeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEE-EEeCCCcEEEEE
Q 004998 608 NLVCSLSFDRDGELFA-AAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIA-SSNFEGVVQVGQ 685 (720)
Q Consensus 608 ~~V~sv~f~~dg~~la-t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~la-S~s~D~~v~lWD 685 (720)
..+.+++|+|||++|+ +++.|++++||++..... .......+...+.+++|+|++. .|+ +++.|+.++||+
T Consensus 129 ~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~------~~~~~~~~~~~~~~~~~s~dg~-~l~~~~~~~~~~~i~~ 201 (297)
T 2ojh_A 129 LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSG------VETRLTHGEGRNDGPDYSPDGR-WIYFNSSRTGQMQIWR 201 (297)
T ss_dssp SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTC------CEEECCCSSSCEEEEEECTTSS-EEEEEECTTSSCEEEE
T ss_pred CCccceEECCCCCEEEEEECCCCceEEEEEECCCC------cceEcccCCCccccceECCCCC-EEEEEecCCCCccEEE
Confidence 3489999999999877 888999999999643211 1112223456799999999765 555 555699999999
Q ss_pred CC-CCcEEEE-------EEEEeecCCceEEEecCcc
Q 004998 686 VL-HLIYFSA-------LYCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 686 v~-tg~~~~~-------v~~v~~~~~~~~~~~~~~~ 713 (720)
+. .+..+.. +.+++|+|.+..+.+++.+
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~ 237 (297)
T 2ojh_A 202 VRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYD 237 (297)
T ss_dssp EETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEE
T ss_pred ECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcC
Confidence 86 4444443 7899999999988888765
No 390
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=98.34 E-value=4.2e-07 Score=106.53 Aligned_cols=96 Identities=11% Similarity=0.148 Sum_probs=75.6
Q ss_pred CeEEEEECCCCCEEEEeeC---------CCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCC
Q 004998 609 LVCSLSFDRDGELFAAAGV---------NKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEG 679 (720)
Q Consensus 609 ~V~sv~f~~dg~~lat~~~---------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~ 679 (720)
.|.+++|||||++||+++. |++|+|||+.++.... ...+ ...+.+++|||++ ..||+++ |+
T Consensus 61 ~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~------~~~l--~~~~~~~~~SPDG-~~la~~~-~~ 130 (719)
T 1z68_A 61 NASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVR------GNEL--PRPIQYLCWSPVG-SKLAYVY-QN 130 (719)
T ss_dssp TCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECC------SSCC--CSSBCCEEECSST-TCEEEEE-TT
T ss_pred ceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCcccc------ceec--CcccccceECCCC-CEEEEEE-CC
Confidence 3889999999999999887 7999999987762100 0111 2468899999975 5788876 89
Q ss_pred cEEEEECCCCcEEEE--------E-----------------EEEeecCCceEEEecCccc
Q 004998 680 VVQVGQVLHLIYFSA--------L-----------------YCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 680 ~v~lWDv~tg~~~~~--------v-----------------~~v~~~~~~~~~~~~~~~~ 714 (720)
+|++||+.+|++.+. + .+++|||+|..++++++|+
T Consensus 131 ~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~ 190 (719)
T 1z68_A 131 NIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFND 190 (719)
T ss_dssp EEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEEC
T ss_pred eEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECC
Confidence 999999999886542 2 3899999999999999873
No 391
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.34 E-value=8.9e-07 Score=89.80 Aligned_cols=104 Identities=9% Similarity=-0.070 Sum_probs=77.1
Q ss_pred CCCCCCCeEEEEECCCCCEEEEee-CCCcEEEeeCCcccccccccccceEEec-CCCCEEEEEEecCCCCEEEEEeCC--
Q 004998 603 LLNSSNLVCSLSFDRDGELFAAAG-VNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFE-- 678 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~v~~~~~~~~~laS~s~D-- 678 (720)
+..+...+.+++|+|||++|+.++ .|+.++||++.... ..+..+. +...+.+++|+|++ .+||.++.|
T Consensus 168 ~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~-------~~~~~~~~~~~~~~~~~~s~dg-~~l~~~~~~~~ 239 (297)
T 2ojh_A 168 LTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDG-------SSVERITDSAYGDWFPHPSPSG-DKVVFVSYDAD 239 (297)
T ss_dssp CCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTS-------SCEEECCCCSEEEEEEEECTTS-SEEEEEEEETT
T ss_pred cccCCCccccceECCCCCEEEEEecCCCCccEEEECCCC-------CCcEEEecCCcccCCeEECCCC-CEEEEEEcCCC
Confidence 345578899999999999887666 59999999975321 1222332 34568999999965 577777765
Q ss_pred ---------CcEEEEECCCCcE--EEE-------EEEEeecCCceEEEecCccc
Q 004998 679 ---------GVVQVGQVLHLIY--FSA-------LYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 679 ---------~~v~lWDv~tg~~--~~~-------v~~v~~~~~~~~~~~~~~~~ 714 (720)
+.|.+||+.+++. +.. +.+++|+|.+..+.+++.+.
T Consensus 240 ~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 240 VFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp CCSCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred CCcccccCceEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEEecc
Confidence 5699999998865 332 56789999999988887664
No 392
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=98.33 E-value=1.3e-06 Score=102.59 Aligned_cols=108 Identities=7% Similarity=-0.038 Sum_probs=76.7
Q ss_pred CCCeEEEEECCCCCEEEEeeC-CC-----cEEEeeCCcccccc-cccc--cc-----------eE---EecCCCCEEEEE
Q 004998 607 SNLVCSLSFDRDGELFAAAGV-NK-----KIKVFECDAIINEN-RDIH--YP-----------VV---EMASRSKLSSIC 663 (720)
Q Consensus 607 ~~~V~sv~f~~dg~~lat~~~-d~-----~i~iwd~~~~~~~~-~~~~--~~-----------~~---~~~~~~~i~~v~ 663 (720)
...|.+++|+|||++||+++. |+ +|++||+.++.... ...+ .| .. .+.+...|.+++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 467899999999999999998 88 99999987752110 0000 00 00 000002378999
Q ss_pred EecCCCCEEEEEeCCCcEEEEECCCC---cEEE------EEEEEeecCCceEEEecCccceE
Q 004998 664 WNSYIKSQIASSNFEGVVQVGQVLHL---IYFS------ALYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 664 ~~~~~~~~laS~s~D~~v~lWDv~tg---~~~~------~v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
|||++ .+||+++. ++|.+||+.+| +... .+.+++|||++..+++++-+.+.
T Consensus 116 ~SpDg-~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~~~i~ 175 (741)
T 2ecf_A 116 WSPDA-QRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRGRNLW 175 (741)
T ss_dssp ECTTS-SEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEETTEEE
T ss_pred ECCCC-CEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeCCcEE
Confidence 99965 58888875 99999999998 4332 18899999999999888755443
No 393
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=98.31 E-value=3.5e-07 Score=93.52 Aligned_cols=95 Identities=12% Similarity=-0.025 Sum_probs=71.1
Q ss_pred eeehhhhcccCC-CCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH--
Q 004998 64 KHSDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-- 139 (720)
Q Consensus 64 ~~~e~~~Ls~l~-HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs-- 139 (720)
..+|..+|..+. |..+.++++ +.... ...|+|||| .|.+|.+.+. +......++.+++.+|..||+
T Consensus 56 ~~~E~~~l~~l~~~~~vP~v~~-~~~~~---~~~~lv~e~i~G~~l~~~~~------~~~~~~~~~~~l~~~l~~LH~~~ 125 (263)
T 3tm0_A 56 VEREKDMMLWLEGKLPVPKVLH-FERHD---GWSNLLMSEADGVLCSEEYE------DEQSPEKIIELYAECIRLFHSID 125 (263)
T ss_dssp HHHHHHHHHHHTTTSCCCCEEE-EEEET---TEEEEEEECCSSEEHHHHCC------TTTCHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHhcCCCCCeEEE-EEecC---CceEEEEEecCCeehhhccC------CcccHHHHHHHHHHHHHHHhCCC
Confidence 445666776653 566777887 44333 357999999 9999988641 122345788999999999998
Q ss_pred ---------------------------------------------------------cCceeccCCCCcEEEccCCceEE
Q 004998 140 ---------------------------------------------------------QGIVVHNVRPSCFVMSSFNHVSF 162 (720)
Q Consensus 140 ---------------------------------------------------------~gIvHrDLKP~NILl~~~~~vkl 162 (720)
.+++|+|++|.|||++..+.+.|
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~l 205 (263)
T 3tm0_A 126 ISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGF 205 (263)
T ss_dssp CTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEE
T ss_pred cccCCCcchHHHHHHHHHHHHhccccccccccccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEE
Confidence 55899999999999976555679
Q ss_pred eccCcc
Q 004998 163 IESASC 168 (720)
Q Consensus 163 iDfg~a 168 (720)
+||+.+
T Consensus 206 IDwe~a 211 (263)
T 3tm0_A 206 IDLGRS 211 (263)
T ss_dssp CCCTTC
T ss_pred EEchhc
Confidence 999876
No 394
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=98.26 E-value=4.3e-06 Score=87.17 Aligned_cols=110 Identities=9% Similarity=-0.047 Sum_probs=75.3
Q ss_pred ceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEee-CCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCC
Q 004998 591 KLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAG-VNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIK 669 (720)
Q Consensus 591 ~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~ 669 (720)
+++.+..+.. ...+.+++|+|||++|++++ .+++|.+||+.... ...++..+.....+.+++|+|+++
T Consensus 73 ~~~~~~~~~~------~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~-----~~~~~~~~~~~~~~~~~~~s~dg~ 141 (343)
T 1ri6_A 73 ALTFAAESAL------PGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGL-----PVGVVDVVEGLDGCHSANISPDNR 141 (343)
T ss_dssp CEEEEEEEEC------SSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTE-----EEEEEEEECCCTTBCCCEECTTSS
T ss_pred ceeecccccc------CCCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCc-----cccccccccCCCCceEEEECCCCC
Confidence 4555555543 23678999999999776655 48999999984110 012344445556799999999754
Q ss_pred CEEEEEe-CCCcEEEEECCC-CcEEE------------EEEEEeecCCceEE-EecCc
Q 004998 670 SQIASSN-FEGVVQVGQVLH-LIYFS------------ALYCIVLNKLLIIF-RYGMF 712 (720)
Q Consensus 670 ~~laS~s-~D~~v~lWDv~t-g~~~~------------~v~~v~~~~~~~~~-~~~~~ 712 (720)
+|++++ .|+.|.+||+.+ |+... .+.+++|+|.+..+ ..+..
T Consensus 142 -~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~ 198 (343)
T 1ri6_A 142 -TLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNEL 198 (343)
T ss_dssp -EEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETT
T ss_pred -EEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCC
Confidence 666666 899999999988 65421 15678999999743 44433
No 395
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=98.26 E-value=9.4e-07 Score=100.95 Aligned_cols=98 Identities=11% Similarity=-0.090 Sum_probs=75.4
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCC--cEEEeeCCcccccccccccceEEec-CCCCEEEEE--------EecCCCCE
Q 004998 603 LLNSSNLVCSLSFDRDGELFAAAGVNK--KIKVFECDAIINENRDIHYPVVEMA-SRSKLSSIC--------WNSYIKSQ 671 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~--~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~v~--------~~~~~~~~ 671 (720)
+.+|.+.+.+++|+|||++||+++.++ +|++||+.+.. +. .+. +...+..++ |+|++ .+
T Consensus 190 l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~--------~~-~~~~~~~~~~~~~~~~~~~~~~spdg-~~ 259 (582)
T 3o4h_A 190 FDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGS--------VE-DLELPSKDFSSYRPTAITWLGYLPDG-RL 259 (582)
T ss_dssp ECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCC--------EE-ECCCSCSHHHHHCCSEEEEEEECTTS-CE
T ss_pred eecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCc--------EE-EccCCCcChhhhhhccccceeEcCCC-cE
Confidence 345678899999999999999988898 99999987652 11 111 233455555 99987 79
Q ss_pred EEEEeCCCcEEEEECCCCcEEEE----EEEEeecCCceEEEecCcc
Q 004998 672 IASSNFEGVVQVGQVLHLIYFSA----LYCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 672 laS~s~D~~v~lWDv~tg~~~~~----v~~v~~~~~~~~~~~~~~~ 713 (720)
+++++.|++++||++ |+.+.+ +.+++|+ .+..+.+++-+
T Consensus 260 ~~~~~~~g~~~l~~~--g~~~~~~~~~v~~~~~s-dg~~l~~~s~~ 302 (582)
T 3o4h_A 260 AVVARREGRSAVFID--GERVEAPQGNHGRVVLW-RGKLVTSHTSL 302 (582)
T ss_dssp EEEEEETTEEEEEET--TEEECCCSSEEEEEEEE-TTEEEEEEEET
T ss_pred EEEEEcCCcEEEEEE--CCeeccCCCceEEEEec-CCEEEEEEcCC
Confidence 999999999999999 776633 8899999 77777665543
No 396
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=98.25 E-value=1e-05 Score=85.41 Aligned_cols=99 Identities=12% Similarity=-0.069 Sum_probs=70.3
Q ss_pred CCCeEEEEECCCCCEEEEee-CCCcEEEeeCCcccccccccccceEEecC----------CCCEEEEEEecCCCCEEEEE
Q 004998 607 SNLVCSLSFDRDGELFAAAG-VNKKIKVFECDAIINENRDIHYPVVEMAS----------RSKLSSICWNSYIKSQIASS 675 (720)
Q Consensus 607 ~~~V~sv~f~~dg~~lat~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~----------~~~i~~v~~~~~~~~~laS~ 675 (720)
...+..|+|+|||++|++++ .+++|++||+...- . . .++..+.. ...+.+++|+|+++ ++++.
T Consensus 85 ~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g-~---~-~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~ 158 (347)
T 3hfq_A 85 GTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADG-A---L-TLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVID 158 (347)
T ss_dssp SCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTS-C---E-EEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEE
T ss_pred CCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCC-C---e-eecceeecCCCCCCccccCCCceEEEECCCCc-EEEEe
Confidence 56789999999999888887 78999999985310 0 0 12222211 23488999999876 77777
Q ss_pred eCCCcEEEEECC-CCcEEEE----------EEEEeecCCce-EEEecC
Q 004998 676 NFEGVVQVGQVL-HLIYFSA----------LYCIVLNKLLI-IFRYGM 711 (720)
Q Consensus 676 s~D~~v~lWDv~-tg~~~~~----------v~~v~~~~~~~-~~~~~~ 711 (720)
..++.|.+||+. +|+.... ...++|+|.+. ++..+.
T Consensus 159 ~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~ 206 (347)
T 3hfq_A 159 LGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGE 206 (347)
T ss_dssp TTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEET
T ss_pred CCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeC
Confidence 778999999998 6653321 45689999998 444443
No 397
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=98.25 E-value=1.1e-06 Score=100.50 Aligned_cols=94 Identities=10% Similarity=-0.142 Sum_probs=74.6
Q ss_pred EEEEECCCCCEEEEeeCC----CcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCC--cEEEE
Q 004998 611 CSLSFDRDGELFAAAGVN----KKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEG--VVQVG 684 (720)
Q Consensus 611 ~sv~f~~dg~~lat~~~d----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~--~v~lW 684 (720)
.+++|||||++||+++.| .+|++||+.++. ......+...+..++|||++ ..||+++.|+ .|.+|
T Consensus 153 ~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~--------~~~l~~~~~~~~~~~~SpDG-~~l~~~~~~~~~~i~~~ 223 (582)
T 3o4h_A 153 FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGG--------LRVFDSGEGSFSSASISPGM-KVTAGLETAREARLVTV 223 (582)
T ss_dssp CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCC--------CEEECCSSCEEEEEEECTTS-CEEEEEECSSCEEEEEE
T ss_pred ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCC--------ceEeecCCCccccceECCCC-CEEEEccCCCeeEEEEE
Confidence 799999999999998888 889999987652 12222346678999999965 5888888899 99999
Q ss_pred ECCCCcEEEE-------EEEEe--------ecCCceEEEecCccc
Q 004998 685 QVLHLIYFSA-------LYCIV--------LNKLLIIFRYGMFQE 714 (720)
Q Consensus 685 Dv~tg~~~~~-------v~~v~--------~~~~~~~~~~~~~~~ 714 (720)
|+.+|+.. . +.+++ |+|++.++.+++-|.
T Consensus 224 d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g 267 (582)
T 3o4h_A 224 DPRDGSVE-DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREG 267 (582)
T ss_dssp CTTTCCEE-ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETT
T ss_pred cCCCCcEE-EccCCCcChhhhhhccccceeEcCCCcEEEEEEcCC
Confidence 99999876 4 44566 999997777766554
No 398
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=98.23 E-value=1.4e-06 Score=101.77 Aligned_cols=98 Identities=8% Similarity=-0.105 Sum_probs=75.2
Q ss_pred CeEEEEECCCCCEEEEeeCC---------CcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCC
Q 004998 609 LVCSLSFDRDGELFAAAGVN---------KKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFE 678 (720)
Q Consensus 609 ~V~sv~f~~dg~~lat~~~d---------~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~v~~~~~~~~~laS~s~D 678 (720)
.|.+++|||||++||+++.+ ++|.|||+.+.... ++... .+...+.+++|||++ ..||+++.
T Consensus 62 ~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~------~l~~~~~~~~~~~~~~~SPdG-~~la~~~~- 133 (723)
T 1xfd_A 62 RAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQ------SLDPPEVSNAKLQYAGWGPKG-QQLIFIFE- 133 (723)
T ss_dssp TCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCE------ECCCTTCCSCCCSBCCBCSST-TCEEEEET-
T ss_pred ccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceE------eccCCccccccccccEECCCC-CEEEEEEC-
Confidence 58999999999999999875 67889998775210 11111 123348899999965 57888875
Q ss_pred CcEEEEECCCCcEEEE-------E------------------EEEeecCCceEEEecCccc
Q 004998 679 GVVQVGQVLHLIYFSA-------L------------------YCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 679 ~~v~lWDv~tg~~~~~-------v------------------~~v~~~~~~~~~~~~~~~~ 714 (720)
+.|.+||+.+|+..+. + .+++|||++..+++++.|+
T Consensus 134 ~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~ 194 (723)
T 1xfd_A 134 NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAIND 194 (723)
T ss_dssp TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEEC
T ss_pred CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECC
Confidence 8999999999877653 2 5799999999999998774
No 399
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=98.22 E-value=3.2e-06 Score=96.28 Aligned_cols=89 Identities=7% Similarity=-0.071 Sum_probs=74.0
Q ss_pred ECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEEC--CCCcEE
Q 004998 615 FDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQV--LHLIYF 692 (720)
Q Consensus 615 f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~v~lWDv--~tg~~~ 692 (720)
|+|+|.++++++.|++|.|||..+. ..+..+.....+.+++|+|++ .+|++++.|++|++||+ .+++++
T Consensus 145 ~~p~~~~~vs~~~d~~V~v~D~~t~--------~~~~~i~~g~~~~~v~~spdg-~~l~v~~~d~~V~v~D~~~~t~~~~ 215 (543)
T 1nir_A 145 LDLPNLFSVTLRDAGQIALVDGDSK--------KIVKVIDTGYAVHISRMSASG-RYLLVIGRDARIDMIDLWAKEPTKV 215 (543)
T ss_dssp CCGGGEEEEEEGGGTEEEEEETTTC--------CEEEEEECSTTEEEEEECTTS-CEEEEEETTSEEEEEETTSSSCEEE
T ss_pred cCCCCEEEEEEcCCCeEEEEECCCc--------eEEEEEecCcccceEEECCCC-CEEEEECCCCeEEEEECcCCCCcEE
Confidence 8999999999999999999998776 234455432338999999964 69999999999999999 899988
Q ss_pred EE------EEEEeecC----CceEEEecCc
Q 004998 693 SA------LYCIVLNK----LLIIFRYGMF 712 (720)
Q Consensus 693 ~~------v~~v~~~~----~~~~~~~~~~ 712 (720)
.+ ..+++|+| .+..+..+++
T Consensus 216 ~~i~~g~~p~~va~sp~~~~dg~~l~v~~~ 245 (543)
T 1nir_A 216 AEIKIGIEARSVESSKFKGYEDRYTIAGAY 245 (543)
T ss_dssp EEEECCSEEEEEEECCSTTCTTTEEEEEEE
T ss_pred EEEecCCCcceEEeCCCcCCCCCEEEEEEc
Confidence 87 57999999 8887766654
No 400
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=98.21 E-value=6.6e-07 Score=104.63 Aligned_cols=98 Identities=8% Similarity=-0.055 Sum_probs=74.7
Q ss_pred CeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCC----CEEEEEEecCCCCEEEEEeCC------
Q 004998 609 LVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRS----KLSSICWNSYIKSQIASSNFE------ 678 (720)
Q Consensus 609 ~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~----~i~~v~~~~~~~~~laS~s~D------ 678 (720)
.+.+++|+|||+++++ +.|++|++||..++. ....+.++. .|.+++|||++ .+||+++.|
T Consensus 18 ~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~--------~~~~~~~~~~~~~~v~~~~~SpDg-~~l~~~~~~~~~~~~ 87 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYR-EQKGTVRLWNVETNT--------STVLIEGKKIESLRAIRYEISPDR-EYALFSYNVEPIYQH 87 (723)
T ss_dssp CCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCC--------CEEEECTTTTTTTTCSEEEECTTS-SEEEEEESCCCCSSS
T ss_pred cccccEEcCCCcEEEE-eCCCCEEEEECCCCc--------EEEEeccccccccccceEEECCCC-CEEEEEecCccceee
Confidence 4678999999998877 789999999987762 223333322 49999999965 588888764
Q ss_pred ---CcEEEEECCCCcEEE--E-------EEEEeecCCceEEEecCccceE
Q 004998 679 ---GVVQVGQVLHLIYFS--A-------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 679 ---~~v~lWDv~tg~~~~--~-------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
+.|.|||+.+|++.. . +.+++|||++..+++++-..+.
T Consensus 88 ~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~~~i~ 137 (723)
T 1xfd_A 88 SYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFENNIY 137 (723)
T ss_dssp CCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEETTEEE
T ss_pred cceeeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEECCeEE
Confidence 778899999998622 1 5679999999999888765443
No 401
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=98.20 E-value=1.1e-05 Score=84.12 Aligned_cols=112 Identities=11% Similarity=0.023 Sum_probs=76.7
Q ss_pred ccccceEEeeeeccCCCCCCCCCeEEEEECCCCCE-EEEeeCCCc-EEEeeCCcccccccccccceEEecCCCCEEEEEE
Q 004998 587 LSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGEL-FAAAGVNKK-IKVFECDAIINENRDIHYPVVEMASRSKLSSICW 664 (720)
Q Consensus 587 ~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~-lat~~~d~~-i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~ 664 (720)
+...+.+++..+.. ...+.+++|+|||++ ++++..+++ |.+||+...- ...+.. ...+.......+++|
T Consensus 113 ~d~~~~~~~~~~~~------~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g-~~~~~~--~~~~~~~~~~~~~~~ 183 (331)
T 3u4y_A 113 YSFLKNKFISTIPI------PYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADG-VLFDTG--QEFISGGTRPFNITF 183 (331)
T ss_dssp EETTTTEEEEEEEC------CTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTC-CEEEEE--EEEECSSSSEEEEEE
T ss_pred EECCCCCeEEEEEC------CCCccceEECCCCCEEEEEecCCCceEEEEEECCCC-cEeecC--CccccCCCCccceEE
Confidence 33444555555543 345689999999985 555566688 9999986421 001110 122334456899999
Q ss_pred ecCCCCEEEEEeCCCcEEEEECCCCcE---EEE------EEEEeecCCceEE
Q 004998 665 NSYIKSQIASSNFEGVVQVGQVLHLIY---FSA------LYCIVLNKLLIIF 707 (720)
Q Consensus 665 ~~~~~~~laS~s~D~~v~lWDv~tg~~---~~~------v~~v~~~~~~~~~ 707 (720)
+|+++.+++++..+++|.+||+.+++. +.+ +.+++|+|.+..+
T Consensus 184 spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l 235 (331)
T 3u4y_A 184 TPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTNNLPGTIVVSRDGSTV 235 (331)
T ss_dssp CTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECSSCCCCEEECTTSSEE
T ss_pred CCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCCCCCceEEECCCCCEE
Confidence 997654566666799999999999998 665 4678999999843
No 402
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=98.18 E-value=2.8e-06 Score=99.65 Aligned_cols=99 Identities=4% Similarity=-0.147 Sum_probs=76.1
Q ss_pred CCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEECC
Q 004998 608 NLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQVL 687 (720)
Q Consensus 608 ~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~v~lWDv~ 687 (720)
..|.+++|+|||++||+++. ++|++||+.+.... .......+...+.+++|||++ .+||+++ ++.|.+||+.
T Consensus 109 ~~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~-----~~~~l~~~~~~~~~~~~SPDG-~~la~~~-~~~i~~~d~~ 180 (741)
T 2ecf_A 109 TGIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKA-----AVRQLTHGEGFATDAKLSPKG-GFVSFIR-GRNLWVIDLA 180 (741)
T ss_dssp EESCCCEECTTSSEEEEEET-TEEEEEESSSCSTT-----SCCBCCCSSSCEEEEEECTTS-SEEEEEE-TTEEEEEETT
T ss_pred cCcceeEECCCCCEEEEEeC-CcEEEEECCCCCcc-----eEEEcccCCcccccccCCCCC-CEEEEEe-CCcEEEEecC
Confidence 34789999999999999886 99999998765100 011112235679999999965 5888887 5799999999
Q ss_pred CCcEEEE-----------------------EEEEeecCCceEEEecCccc
Q 004998 688 HLIYFSA-----------------------LYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 688 tg~~~~~-----------------------v~~v~~~~~~~~~~~~~~~~ 714 (720)
+|+.... +.+++|||++..+.+++.|.
T Consensus 181 ~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~ 230 (741)
T 2ecf_A 181 SGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDE 230 (741)
T ss_dssp TTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEEC
T ss_pred CCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcC
Confidence 9877653 26789999999999988774
No 403
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=98.18 E-value=1.9e-06 Score=100.67 Aligned_cols=106 Identities=12% Similarity=-0.037 Sum_probs=73.8
Q ss_pred CCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCc-----ccccc-cccc-cceEE-----ecCCCCEEEEEEecCCCCEEE
Q 004998 606 SSNLVCSLSFDRDGELFAAAGVNKKIKVFECDA-----IINEN-RDIH-YPVVE-----MASRSKLSSICWNSYIKSQIA 673 (720)
Q Consensus 606 ~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~-----~~~~~-~~~~-~~~~~-----~~~~~~i~~v~~~~~~~~~la 673 (720)
+...|.+++|+|||++||++ .|+.|+|||+.+ ..... ...+ ..+.. -.....+.+++|||++ .+||
T Consensus 119 ~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg-~~la 196 (706)
T 2z3z_A 119 TNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKG-SCLA 196 (706)
T ss_dssp CTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTS-SEEE
T ss_pred CcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCC-CEEE
Confidence 45678899999999999995 689999999876 41110 0000 00000 0001125899999965 5888
Q ss_pred EEe---------------------------------CCCcEEEEECCCCcEEEE---------EEEEeecCCceEEEecC
Q 004998 674 SSN---------------------------------FEGVVQVGQVLHLIYFSA---------LYCIVLNKLLIIFRYGM 711 (720)
Q Consensus 674 S~s---------------------------------~D~~v~lWDv~tg~~~~~---------v~~v~~~~~~~~~~~~~ 711 (720)
+++ .+..|.+||+.+|+.... +.+++|+|++..+.+++
T Consensus 197 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~ 276 (706)
T 2z3z_A 197 FYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAE 276 (706)
T ss_dssp EEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEE
T ss_pred EEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEE
Confidence 887 346799999999986432 78999999999888876
Q ss_pred cc
Q 004998 712 FQ 713 (720)
Q Consensus 712 ~~ 713 (720)
.+
T Consensus 277 ~~ 278 (706)
T 2z3z_A 277 VN 278 (706)
T ss_dssp EC
T ss_pred eC
Confidence 65
No 404
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=98.17 E-value=7.9e-07 Score=104.16 Aligned_cols=96 Identities=5% Similarity=0.018 Sum_probs=73.0
Q ss_pred EEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCC----CEEEEEEecCCCCEEEEEeC---------
Q 004998 611 CSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRS----KLSSICWNSYIKSQIASSNF--------- 677 (720)
Q Consensus 611 ~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~----~i~~v~~~~~~~~~laS~s~--------- 677 (720)
.+++|+|||++++++ .|++|++||..++. +...+.++. .|.+++|||++ ++||+++.
T Consensus 19 ~~~~~s~dg~~~~~~-~d~~i~~~~~~~g~--------~~~~~~~~~~~~~~~~~~~~SpDg-~~la~~~~~~~~~~~s~ 88 (719)
T 1z68_A 19 FFPNWISGQEYLHQS-ADNNIVLYNIETGQ--------SYTILSNRTMKSVNASNYGLSPDR-QFVYLESDYSKLWRYSY 88 (719)
T ss_dssp CCCEESSSSEEEEEC-TTSCEEEEESSSCC--------EEEEECHHHHHTTTCSEEEECTTS-SEEEEEEEEEECSSSCE
T ss_pred CccEECCCCeEEEEc-CCCCEEEEEcCCCc--------EEEEEccccccccceeeEEECCCC-CeEEEEecCceeEEeec
Confidence 378999999877776 59999999987762 222332222 38999999965 58888775
Q ss_pred CCcEEEEECCCCcEE---E---EEEEEeecCCceEEEecCccceE
Q 004998 678 EGVVQVGQVLHLIYF---S---ALYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 678 D~~v~lWDv~tg~~~---~---~v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
|++|++||+.+|+.+ . .+.+++|||+|..+++++-..+.
T Consensus 89 ~~~i~~~d~~~g~~~~~~~l~~~~~~~~~SPDG~~la~~~~~~i~ 133 (719)
T 1z68_A 89 TATYYIYDLSNGEFVRGNELPRPIQYLCWSPVGSKLAYVYQNNIY 133 (719)
T ss_dssp EEEEEEEETTTTEECCSSCCCSSBCCEEECSSTTCEEEEETTEEE
T ss_pred ceEEEEEECCCCccccceecCcccccceECCCCCEEEEEECCeEE
Confidence 799999999999873 2 17889999999999988644443
No 405
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=98.16 E-value=7.2e-06 Score=85.24 Aligned_cols=78 Identities=9% Similarity=-0.039 Sum_probs=63.5
Q ss_pred CCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEEC
Q 004998 607 SNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQV 686 (720)
Q Consensus 607 ~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~v~lWDv 686 (720)
...+.+++|+|||++++++ +++|.+||+.+. ..+..+.....+.+++|+|++ ++|++++.|+.|++||+
T Consensus 240 ~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~--------~~~~~~~~~~~~~~~~~s~dg-~~l~~~~~~~~i~v~d~ 308 (337)
T 1pby_B 240 DVFYFSTAVNPAKTRAFGA--YNVLESFDLEKN--------ASIKRVPLPHSYYSVNVSTDG-STVWLGGALGDLAAYDA 308 (337)
T ss_dssp SSCEEEEEECTTSSEEEEE--ESEEEEEETTTT--------EEEEEEECSSCCCEEEECTTS-CEEEEESBSSEEEEEET
T ss_pred CCceeeEEECCCCCEEEEe--CCeEEEEECCCC--------cCcceecCCCceeeEEECCCC-CEEEEEcCCCcEEEEEC
Confidence 4678899999999998888 799999998765 233344444568899999965 57888888999999999
Q ss_pred CCCcEEEEE
Q 004998 687 LHLIYFSAL 695 (720)
Q Consensus 687 ~tg~~~~~v 695 (720)
.+++.+.++
T Consensus 309 ~~~~~~~~~ 317 (337)
T 1pby_B 309 ETLEKKGQV 317 (337)
T ss_dssp TTCCEEEEE
T ss_pred cCCcEEEEE
Confidence 999988764
No 406
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=98.15 E-value=1.3e-05 Score=84.00 Aligned_cols=106 Identities=9% Similarity=0.016 Sum_probs=74.3
Q ss_pred ceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEe-eCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCC
Q 004998 591 KLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAA-GVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIK 669 (720)
Q Consensus 591 ~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~ 669 (720)
+.+++..+..+. .++...+.+++|+|||++++.+ ..++.|.+||..+.. .+..+.... -.+++|+|+++
T Consensus 215 ~~~~~~~~~~~~-~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~--------~~~~~~~~~-~~~~~~s~dg~ 284 (353)
T 3vgz_A 215 DNKILSRKKLLD-DGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGN--------ILAKVAAPE-SLAVLFNPARN 284 (353)
T ss_dssp TTEEEEEEECCC-SSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCC--------EEEEEECSS-CCCEEEETTTT
T ss_pred CCeEEEEEEcCC-CCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCc--------EEEEEEcCC-CceEEECCCCC
Confidence 444554444211 2345678999999999965544 456999999987651 222222222 25799999766
Q ss_pred CEEEEEeCCCcEEEEECCCCcEEEE------EEEEeecCCceE
Q 004998 670 SQIASSNFEGVVQVGQVLHLIYFSA------LYCIVLNKLLII 706 (720)
Q Consensus 670 ~~laS~s~D~~v~lWDv~tg~~~~~------v~~v~~~~~~~~ 706 (720)
.++++...|++|.+||+.+++.+.. .++++|++.+..
T Consensus 285 ~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~ 327 (353)
T 3vgz_A 285 EAYVTHRQAGKVSVIDAKSYKVVKTFDTPTHPNSLALSADGKT 327 (353)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECCSEEEEEEECTTSCE
T ss_pred EEEEEECCCCeEEEEECCCCeEEEEEecCCCCCeEEEcCCCCE
Confidence 4566666799999999999998876 689999999973
No 407
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.15 E-value=2e-06 Score=92.34 Aligned_cols=103 Identities=13% Similarity=0.151 Sum_probs=76.7
Q ss_pred eeeehhhhcccCC--CCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004998 63 RKHSDGVELTHGD--HLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 63 r~~~e~~~Ls~l~--HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
+..+|..+|..+. +..+.+++. ++.+.......|+|||| .|..|.+.. ...++..+...++.+++..|..||+
T Consensus 82 ~~~~E~~~l~~L~~~~vpvP~~~~-~~~~~~~~g~~~~vme~v~G~~l~~~~---~~~l~~~~~~~~~~~l~~~La~LH~ 157 (359)
T 3dxp_A 82 AIEREYRVMDALAGTDVPVAKMYA-LCEDESVIGRAFYIMEFVSGRVLWDQS---LPGMSPAERTAIYDEMNRVIAAMHT 157 (359)
T ss_dssp CHHHHHHHHHHHTTSSSCCCCEEE-EECCTTTTSSCEEEEECCCCBCCCCTT---CTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcCCCCCCcEEE-ECCCCCccCCeEEEEEecCCeecCCCc---cccCCHHHHHHHHHHHHHHHHHHhC
Confidence 3345666777666 345677777 55454433457899999 887764311 2237888899999999999999997
Q ss_pred ----------------------------------------------------------cCceeccCCCCcEEEccCCc--
Q 004998 140 ----------------------------------------------------------QGIVVHNVRPSCFVMSSFNH-- 159 (720)
Q Consensus 140 ----------------------------------------------------------~gIvHrDLKP~NILl~~~~~-- 159 (720)
.+++|+|++|.|||++.++.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v 237 (359)
T 3dxp_A 158 VDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRV 237 (359)
T ss_dssp SCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCE
T ss_pred CCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcE
Confidence 36899999999999997653
Q ss_pred eEEeccCccc
Q 004998 160 VSFIESASCS 169 (720)
Q Consensus 160 vkliDfg~a~ 169 (720)
+.++||+.+.
T Consensus 238 ~~viDwe~a~ 247 (359)
T 3dxp_A 238 LAVLDWELST 247 (359)
T ss_dssp EEECCCTTCE
T ss_pred EEEECccccc
Confidence 6899999873
No 408
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=98.15 E-value=1.5e-05 Score=83.13 Aligned_cols=112 Identities=11% Similarity=0.021 Sum_probs=74.5
Q ss_pred ccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEe-eCCCcEEEeeCCcccccccccccceEEecC-CCCEEEEEE
Q 004998 587 LSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAA-GVNKKIKVFECDAIINENRDIHYPVVEMAS-RSKLSSICW 664 (720)
Q Consensus 587 ~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~i~~v~~ 664 (720)
+...+.+++..+.. +...+ +++|+|||++++++ ..+++|.+||..+.. .....+.. .....+++|
T Consensus 25 ~d~~~~~~~~~~~~-----~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~-------~~~~~~~~~~~~~~~~~~ 91 (331)
T 3u4y_A 25 FSTDTLEILNQITL-----GYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEP-------PKVVAIQEGQSSMADVDI 91 (331)
T ss_dssp EETTTCCEEEEEEC-----CCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSS-------CEEEEEEECSSCCCCEEE
T ss_pred EeCcccceeeeEEc-----cCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCc-------eeEEecccCCCCccceEE
Confidence 33344455555442 13445 99999999965554 448999999987652 11333333 334444999
Q ss_pred ecCCCCEEEEEeCC-C--cEEEEECCCCcEEEE------EEEEeecCCce-EEEecCc
Q 004998 665 NSYIKSQIASSNFE-G--VVQVGQVLHLIYFSA------LYCIVLNKLLI-IFRYGMF 712 (720)
Q Consensus 665 ~~~~~~~laS~s~D-~--~v~lWDv~tg~~~~~------v~~v~~~~~~~-~~~~~~~ 712 (720)
+|++ .+|+++..+ + +|.+||+.+++.+.+ ..+++|+|.+. ++..+..
T Consensus 92 s~dg-~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~ 148 (331)
T 3u4y_A 92 TPDD-QFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDRS 148 (331)
T ss_dssp CTTS-SEEEECCCSSSSCEEEEEETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEET
T ss_pred CCCC-CEEEEecCCCCcccEEEEECCCCCeEEEEECCCCccceEECCCCCEEEEEecC
Confidence 9965 577754444 2 999999999998876 57899999986 4444443
No 409
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=98.14 E-value=5.9e-06 Score=85.92 Aligned_cols=109 Identities=8% Similarity=-0.038 Sum_probs=76.5
Q ss_pred cccceEEeeeeccCCCCCCCC-CeEEEEECCCCCE-EEEeeCCCcEEEeeCCcccccccccccceEEecCC------CCE
Q 004998 588 SFSKLRVKADLNQGDLLNSSN-LVCSLSFDRDGEL-FAAAGVNKKIKVFECDAIINENRDIHYPVVEMASR------SKL 659 (720)
Q Consensus 588 ~~~~~~~~~~l~~~~~~~~~~-~V~sv~f~~dg~~-lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~------~~i 659 (720)
...+.+++..+..+ +.. .+.+++|+|||++ +++++.+++|.+||+.+.. .+..+... ..+
T Consensus 17 d~~~~~~~~~~~~~----~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~--------~~~~~~~~~~~~~~~~~ 84 (337)
T 1pby_B 17 DTEKMAVDKVITIA----DAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGE--------TLGRIDLSTPEERVKSL 84 (337)
T ss_dssp ETTTTEEEEEEECT----TCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCC--------EEEEEECCBTTEEEECT
T ss_pred ECCCCcEEEEEEcC----CCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCC--------eEeeEEcCCcccccccc
Confidence 33455666666531 111 4788999999975 5677778999999987651 22222221 156
Q ss_pred EEEEEecCCCCEEEEEe------------CCCcEEEEECCCCcEEEE------EEEEeecCCceEEEe
Q 004998 660 SSICWNSYIKSQIASSN------------FEGVVQVGQVLHLIYFSA------LYCIVLNKLLIIFRY 709 (720)
Q Consensus 660 ~~v~~~~~~~~~laS~s------------~D~~v~lWDv~tg~~~~~------v~~v~~~~~~~~~~~ 709 (720)
.+++|+|++ .+|+.++ .|+.|.+||+.+++.+.. +.+++|+|.+..+..
T Consensus 85 ~~~~~s~dg-~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~ 151 (337)
T 1pby_B 85 FGAALSPDG-KTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYG 151 (337)
T ss_dssp TCEEECTTS-SEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEE
T ss_pred cceEECCCC-CEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCCCcceeEECCCCCEEEE
Confidence 789999965 4777775 579999999999988776 467899999875443
No 410
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=98.09 E-value=4.8e-06 Score=97.53 Aligned_cols=102 Identities=10% Similarity=0.019 Sum_probs=75.7
Q ss_pred CCCCCeEEEEECCCCCEEE-----EeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCC
Q 004998 605 NSSNLVCSLSFDRDGELFA-----AAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEG 679 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~~la-----t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~ 679 (720)
+|...+.+++|||||++|| +|+.+.+|+|||+.++.....+ .+. ..+...++|+|++ ..|+.+++|.
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~------~~~-~~~~~~~~wspDg-~~l~~~~~d~ 189 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVD------VIE-GGKYATPKWTPDS-KGFYYEWLPT 189 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSC------CBS-CCTTCCCEECTTS-SEEEEEECCC
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCc------ccC-cccccceEEecCC-CEEEEEEecC
Confidence 3455789999999999999 6666789999999876311000 111 1223689999965 5889999888
Q ss_pred c-------------EEEEECCCCc----EEEE-------EEEEeecCCceEEEecCccc
Q 004998 680 V-------------VQVGQVLHLI----YFSA-------LYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 680 ~-------------v~lWDv~tg~----~~~~-------v~~v~~~~~~~~~~~~~~~~ 714 (720)
+ |.+||+.+++ .+.+ +.+++|++++..++..+.+.
T Consensus 190 ~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~ 248 (695)
T 2bkl_A 190 DPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRG 248 (695)
T ss_dssp CTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEET
T ss_pred CCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCC
Confidence 7 9999999887 4432 67899999998888776543
No 411
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=98.07 E-value=3.4e-05 Score=80.87 Aligned_cols=109 Identities=8% Similarity=0.133 Sum_probs=78.1
Q ss_pred cceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-----CCCCEEEEEE
Q 004998 590 SKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-----SRSKLSSICW 664 (720)
Q Consensus 590 ~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-----~~~~i~~v~~ 664 (720)
.+.+++..+. .+...+.+++|+|||+++++++.++.|.+||..+.. .+..+. ....+.+++|
T Consensus 172 ~~~~~~~~~~-----~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~--------~~~~~~~~~~~~~~~~~~~~~ 238 (353)
T 3vgz_A 172 GNIKLKTAIQ-----NTGKMSTGLALDSEGKRLYTTNADGELITIDTADNK--------ILSRKKLLDDGKEHFFINISL 238 (353)
T ss_dssp TTTEEEEEEC-----CCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTE--------EEEEEECCCSSSCCCEEEEEE
T ss_pred CCCceEEEec-----CCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCe--------EEEEEEcCCCCCCcccceEEE
Confidence 3445555554 124557899999999999999999999999987652 122211 2445889999
Q ss_pred ecCCCCEEEEEeCCCcEEEEECCCCcEEEEE-----EEEeecCCce-EEEecC
Q 004998 665 NSYIKSQIASSNFEGVVQVGQVLHLIYFSAL-----YCIVLNKLLI-IFRYGM 711 (720)
Q Consensus 665 ~~~~~~~laS~s~D~~v~lWDv~tg~~~~~v-----~~v~~~~~~~-~~~~~~ 711 (720)
+|+++.+++++..++.|.+||+.+++.+..+ .+++|++.+. +++.+.
T Consensus 239 s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~ 291 (353)
T 3vgz_A 239 DTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPESLAVLFNPARNEAYVTHR 291 (353)
T ss_dssp ETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSSCCCEEEETTTTEEEEEET
T ss_pred CCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCceEEECCCCCEEEEEEC
Confidence 9976544445555699999999999988774 4789999887 444443
No 412
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=98.06 E-value=5.1e-06 Score=98.02 Aligned_cols=121 Identities=11% Similarity=0.092 Sum_probs=82.6
Q ss_pred hhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCc---------EEEeeCCcccccccccccceEEecC
Q 004998 585 KYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKK---------IKVFECDAIINENRDIHYPVVEMAS 655 (720)
Q Consensus 585 ~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~---------i~iwd~~~~~~~~~~~~~~~~~~~~ 655 (720)
..+...+-+....+....+........+++|||||++||.++.+++ +.|||+.++... ....+
T Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~--------~l~~~ 110 (740)
T 4a5s_A 39 LVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLI--------TEERI 110 (740)
T ss_dssp EEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEEC--------CSSCC
T ss_pred EEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEE--------EcccC
Confidence 3333333343333443233333333456899999999999998754 559999876211 11123
Q ss_pred CCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE--------EE-----------------EEeecCCceEEEec
Q 004998 656 RSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA--------LY-----------------CIVLNKLLIIFRYG 710 (720)
Q Consensus 656 ~~~i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~--------v~-----------------~v~~~~~~~~~~~~ 710 (720)
...+..++|||++ +.||.++ |+.|.+||+.+|+..+- ++ .+.|||+|..+++.
T Consensus 111 ~~~~~~~~~SPdG-~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~ 188 (740)
T 4a5s_A 111 PNNTQWVTWSPVG-HKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYA 188 (740)
T ss_dssp CTTEEEEEECSST-TCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEE
T ss_pred CCcceeeEECCCC-CEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEE
Confidence 5679999999975 5788875 79999999999886552 21 37899999999999
Q ss_pred Cccce
Q 004998 711 MFQEV 715 (720)
Q Consensus 711 ~~~~~ 715 (720)
++|+-
T Consensus 189 ~~d~~ 193 (740)
T 4a5s_A 189 QFNDT 193 (740)
T ss_dssp EEECT
T ss_pred EEccc
Confidence 88753
No 413
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=98.06 E-value=2.8e-05 Score=84.32 Aligned_cols=91 Identities=4% Similarity=-0.037 Sum_probs=70.6
Q ss_pred CCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEEC
Q 004998 607 SNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQV 686 (720)
Q Consensus 607 ~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~v~lWDv 686 (720)
.. |..|+| ||.+|++| .++.|++||+.+..... ..-.+...|.++.|.+. .+|.++.||+|.+||+
T Consensus 88 p~-V~~l~f--d~~~L~v~-~~~~l~v~dv~sl~~~~-------~~~~~~~~v~~i~~~~p---~~av~~~dG~L~v~dl 153 (388)
T 1xip_A 88 PD-VIFVCF--HGDQVLVS-TRNALYSLDLEELSEFR-------TVTSFEKPVFQLKNVNN---TLVILNSVNDLSALDL 153 (388)
T ss_dssp TT-EEEEEE--ETTEEEEE-ESSEEEEEESSSTTCEE-------EEEECSSCEEEEEECSS---EEEEEETTSEEEEEET
T ss_pred CC-eeEEEE--CCCEEEEE-cCCcEEEEEchhhhccC-------ccceeecceeeEEecCC---CEEEEECCCCEEEEEc
Confidence 45 999999 99999998 89999999988764211 11123455888888763 3899999999999999
Q ss_pred CCCcEEEE---EEEEeecCCceEEEecC
Q 004998 687 LHLIYFSA---LYCIVLNKLLIIFRYGM 711 (720)
Q Consensus 687 ~tg~~~~~---v~~v~~~~~~~~~~~~~ 711 (720)
.+++.... |.|++|||.|..++.+.
T Consensus 154 ~~~~~~~~~~~Vs~v~WSpkG~~vg~~d 181 (388)
T 1xip_A 154 RTKSTKQLAQNVTSFDVTNSQLAVLLKD 181 (388)
T ss_dssp TTCCEEEEEESEEEEEECSSEEEEEETT
T ss_pred cCCccccccCCceEEEEcCCceEEEEcC
Confidence 98876543 99999999996665543
No 414
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=98.03 E-value=6.1e-06 Score=96.29 Aligned_cols=95 Identities=6% Similarity=-0.107 Sum_probs=73.5
Q ss_pred CCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEECC
Q 004998 608 NLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQVL 687 (720)
Q Consensus 608 ~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~v~lWDv~ 687 (720)
..|.+++|+|| .+++.+ .|++|+|||+.+.. +.....+...+.+++|||++ +.||++ .|+.|.+||+.
T Consensus 82 ~~v~~~~~spd-~~~~~~-~~~~i~~~d~~~~~--------~~~l~~~~~~~~~~~~SpdG-~~la~~-~~~~i~v~~~~ 149 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLF-TQGGLVGFDMLARK--------VTYLFDTNEETASLDFSPVG-DRVAYV-RNHNLYIARGG 149 (706)
T ss_dssp CCCEEEEETTT-TEEEEE-ETTEEEEEETTTTE--------EEEEECCTTCCTTCEECTTS-SEEEEE-ETTEEEEEECB
T ss_pred cCceeEEECCC-CeEEEE-ECCEEEEEECCCCc--------eEEccCCcccccCCcCCCCC-CEEEEE-ECCeEEEEecC
Confidence 56999999999 555544 36999999987651 22233345678999999965 588885 68999999999
Q ss_pred C-----CcEEEE-------E--------------EEEeecCCceEEEecCccc
Q 004998 688 H-----LIYFSA-------L--------------YCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 688 t-----g~~~~~-------v--------------~~v~~~~~~~~~~~~~~~~ 714 (720)
+ |+..+. + .+++|||++..++++++|+
T Consensus 150 ~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~ 202 (706)
T 2z3z_A 150 KLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQ 202 (706)
T ss_dssp CTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEEC
T ss_pred cccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECC
Confidence 9 876652 3 6899999999999998763
No 415
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.03 E-value=1.2e-05 Score=84.13 Aligned_cols=92 Identities=5% Similarity=-0.087 Sum_probs=71.6
Q ss_pred EEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCC--CEEEEEEecCCCCEEEEEeCCCcEEEEECCCC
Q 004998 612 SLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRS--KLSSICWNSYIKSQIASSNFEGVVQVGQVLHL 689 (720)
Q Consensus 612 sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~--~i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg 689 (720)
.++|++++.++++++.+++|++||..+. ..+..+.... .+..++|+|+++..+++++.++.|.+||+.++
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~--------~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~ 75 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASD--------TVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTC 75 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTT--------EEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTT
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCC--------cEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCC
Confidence 3578999999999999999999998765 1333333333 57899999976545667778999999999999
Q ss_pred cEEEEE-------------EEEeecCCceEEEecC
Q 004998 690 IYFSAL-------------YCIVLNKLLIIFRYGM 711 (720)
Q Consensus 690 ~~~~~v-------------~~v~~~~~~~~~~~~~ 711 (720)
+.+..+ .+++|+|.+..+..++
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~ 110 (349)
T 1jmx_B 76 KNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATV 110 (349)
T ss_dssp EEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEE
T ss_pred cEEEEEEcccccccccccccceEECCCCCEEEEEc
Confidence 877653 5679999998776665
No 416
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=97.99 E-value=1.6e-05 Score=97.52 Aligned_cols=101 Identities=5% Similarity=-0.113 Sum_probs=80.8
Q ss_pred CCCCCC-CeEEEEECCCCCEEEEeeCCCcEE-EeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCc
Q 004998 603 LLNSSN-LVCSLSFDRDGELFAAAGVNKKIK-VFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGV 680 (720)
Q Consensus 603 ~~~~~~-~V~sv~f~~dg~~lat~~~d~~i~-iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~ 680 (720)
+..|.. .|.+++|+ ||+.|++++.+..|. +||..+.. +.....+...+.+++|+|+ +.+||+++.|++
T Consensus 332 ~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~--------~~~l~~~~~~~~~~~~SpD-G~~la~~~~~~~ 401 (1045)
T 1k32_A 332 VPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGK--------AEKFEENLGNVFAMGVDRN-GKFAVVANDRFE 401 (1045)
T ss_dssp CSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCC--------EEECCCCCCSEEEEEECTT-SSEEEEEETTSE
T ss_pred ccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCC--------ceEecCCccceeeeEECCC-CCEEEEECCCCe
Confidence 345566 89999999 999999999988888 88976541 1111134567999999996 469999999999
Q ss_pred EEEEECCCCcEEEE-------EEEEeecCCceEEEecCcc
Q 004998 681 VQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 681 v~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~ 713 (720)
|++||+.+|+.... +.+++|+|++..+++++.+
T Consensus 402 v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~ 441 (1045)
T 1k32_A 402 IMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPL 441 (1045)
T ss_dssp EEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEE
T ss_pred EEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecC
Confidence 99999999987654 5789999999988887654
No 417
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=97.98 E-value=2.1e-05 Score=82.27 Aligned_cols=78 Identities=5% Similarity=-0.054 Sum_probs=62.4
Q ss_pred CCCeEEEEECC-CCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEE
Q 004998 607 SNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQ 685 (720)
Q Consensus 607 ~~~V~sv~f~~-dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~v~lWD 685 (720)
...+.+++|+| ||++++++ +++|.+||+.+. ..+..+.....+.+++|+|+++ +|++++.|++|++||
T Consensus 254 ~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~--------~~~~~~~~~~~~~~~~~s~dg~-~l~~~~~~~~v~v~d 322 (349)
T 1jmx_B 254 TELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQR--------KLIKAANLDHTYYCVAFDKKGD-KLYLGGTFNDLAVFN 322 (349)
T ss_dssp SSCEEEEEECSSCTTEEEEE--ESEEEEEETTTT--------EEEEEEECSSCCCEEEECSSSS-CEEEESBSSEEEEEE
T ss_pred CCcceeeEecCCCCCEEEEE--cCeEEEEECccC--------eEEEEEcCCCCccceEECCCCC-EEEEecCCCeEEEEe
Confidence 56789999999 99999888 899999998765 1233333445678999999754 666678899999999
Q ss_pred CCCCcEEEEE
Q 004998 686 VLHLIYFSAL 695 (720)
Q Consensus 686 v~tg~~~~~v 695 (720)
+.+++.+.++
T Consensus 323 ~~~~~~~~~~ 332 (349)
T 1jmx_B 323 PDTLEKVKNI 332 (349)
T ss_dssp TTTTEEEEEE
T ss_pred ccccceeeee
Confidence 9999988764
No 418
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=97.98 E-value=2.2e-05 Score=82.78 Aligned_cols=99 Identities=10% Similarity=0.040 Sum_probs=68.6
Q ss_pred CCeEEEEECCCCCEEEEeeC--CCcEEEeeCCcccccccccccceEE-ecCCCCEEEEEEecCCCCEEEEEe-CCCcEEE
Q 004998 608 NLVCSLSFDRDGELFAAAGV--NKKIKVFECDAIINENRDIHYPVVE-MASRSKLSSICWNSYIKSQIASSN-FEGVVQV 683 (720)
Q Consensus 608 ~~V~sv~f~~dg~~lat~~~--d~~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~i~~v~~~~~~~~~laS~s-~D~~v~l 683 (720)
..+..++|+|||++++++.. ++.|.+||+.+... ..+.. ..+...+..|+|+|++ .+|++++ .|++|++
T Consensus 40 ~~p~~~a~spdg~l~~~~~~~~~~~v~~~~~~~g~~------~~~~~~~~~~~~p~~~a~spdg-~~l~~~~~~~~~v~v 112 (347)
T 3hfq_A 40 QNPTYLALSAKDCLYSVDKEDDEGGIAAWQIDGQTA------HKLNTVVAPGTPPAYVAVDEAR-QLVYSANYHKGTAEV 112 (347)
T ss_dssp SCCCCEEECTTCEEEEEEEETTEEEEEEEEEETTEE------EEEEEEEEESCCCSEEEEETTT-TEEEEEETTTTEEEE
T ss_pred CCcceEEEccCCeEEEEEecCCCceEEEEEecCCcE------EEeeeeecCCCCCEEEEECCCC-CEEEEEeCCCCEEEE
Confidence 55678999999995555433 79999999854311 12222 2235578899999965 5777777 6799999
Q ss_pred EECC-CCc--EEEE----------------EEEEeecCCceEEEecCcc
Q 004998 684 GQVL-HLI--YFSA----------------LYCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 684 WDv~-tg~--~~~~----------------v~~v~~~~~~~~~~~~~~~ 713 (720)
||+. +|. .+.. +.+++|+|.+.+++.+.-+
T Consensus 113 ~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~ 161 (347)
T 3hfq_A 113 MKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGS 161 (347)
T ss_dssp EEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTT
T ss_pred EEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCC
Confidence 9996 332 2332 3469999999877776544
No 419
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=97.96 E-value=5.4e-05 Score=80.30 Aligned_cols=105 Identities=16% Similarity=0.026 Sum_probs=70.0
Q ss_pred CCCeEEEEECCCCCEE-EEeeCCCcEEEeeCCcccc----c-cccc-ccceEEecCCCCEEEEEEecCCCCEEEEEe-CC
Q 004998 607 SNLVCSLSFDRDGELF-AAAGVNKKIKVFECDAIIN----E-NRDI-HYPVVEMASRSKLSSICWNSYIKSQIASSN-FE 678 (720)
Q Consensus 607 ~~~V~sv~f~~dg~~l-at~~~d~~i~iwd~~~~~~----~-~~~~-~~~~~~~~~~~~i~~v~~~~~~~~~laS~s-~D 678 (720)
...+.+++|+|||+++ +++..+++|+||++..... . .... ..+............++|+|+++ +|+.++ .+
T Consensus 154 ~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~-~l~v~~~~~ 232 (361)
T 3scy_A 154 MPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGK-FAYLINEIG 232 (361)
T ss_dssp SCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSS-EEEEEETTT
T ss_pred CCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCC-EEEEEcCCC
Confidence 4567999999999965 4555589999999765321 0 0000 00122333455688999999764 665555 69
Q ss_pred CcEEEEECCCCcE--EEE----------EEEEeecCCceEE-EecCc
Q 004998 679 GVVQVGQVLHLIY--FSA----------LYCIVLNKLLIIF-RYGMF 712 (720)
Q Consensus 679 ~~v~lWDv~tg~~--~~~----------v~~v~~~~~~~~~-~~~~~ 712 (720)
++|.+||+.+|+. +.+ ..+++|+|.+..+ +++.-
T Consensus 233 ~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~ 279 (361)
T 3scy_A 233 GTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRL 279 (361)
T ss_dssp CEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECS
T ss_pred CeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCC
Confidence 9999999998864 222 3489999999865 44433
No 420
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=97.93 E-value=2.2e-05 Score=92.06 Aligned_cols=97 Identities=14% Similarity=0.119 Sum_probs=72.5
Q ss_pred CCCeEEEEECCCCCEEEEeeCCC-----cEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCc-
Q 004998 607 SNLVCSLSFDRDGELFAAAGVNK-----KIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGV- 680 (720)
Q Consensus 607 ~~~V~sv~f~~dg~~lat~~~d~-----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~- 680 (720)
...+.+++|||||++||.++.++ +|+|||+.++. .+.......++.+++|+|++ ..|+.+++|+.
T Consensus 124 ~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~--------~~~~~~~~~~~~~~~wspDg-~~l~~~~~~~~~ 194 (710)
T 2xdw_A 124 TVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAK--------ELPDVLERVKFSCMAWTHDG-KGMFYNAYPQQD 194 (710)
T ss_dssp CEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTE--------EEEEEEEEECSCCEEECTTS-SEEEEEECCCCS
T ss_pred CEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCC--------CCcccccCcccceEEEEeCC-CEEEEEEECCcc
Confidence 34688999999999999876654 99999998762 11111112347789999965 58888888877
Q ss_pred ---------------EEEEECCCCc----EEEE-------EEEEeecCCceEEEecCc
Q 004998 681 ---------------VQVGQVLHLI----YFSA-------LYCIVLNKLLIIFRYGMF 712 (720)
Q Consensus 681 ---------------v~lWDv~tg~----~~~~-------v~~v~~~~~~~~~~~~~~ 712 (720)
|.+||+.+++ .+.+ +.++.|+|++..++..+.
T Consensus 195 ~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~ 252 (710)
T 2xdw_A 195 GKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIR 252 (710)
T ss_dssp SCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEE
T ss_pred ccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEE
Confidence 9999999987 3322 578999999988877654
No 421
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=97.89 E-value=2.6e-05 Score=90.21 Aligned_cols=105 Identities=4% Similarity=-0.206 Sum_probs=73.3
Q ss_pred CCCCeEEEEECCCCCEEEEeeCC----------CcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEE
Q 004998 606 SSNLVCSLSFDRDGELFAAAGVN----------KKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIAS 674 (720)
Q Consensus 606 ~~~~V~sv~f~~dg~~lat~~~d----------~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~v~~~~~~~~~laS 674 (720)
|...+.+++|+|||+.||+++.| .+|++||+.+.... +...+.... .+...+..++|||++ .+||.
T Consensus 128 ~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~~~~~l~~~~~~~~~~~~~SpDG-~~la~ 204 (662)
T 3azo_A 128 GGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAA--DRSAVRELSDDAHRFVTGPRLSPDG-RQAVW 204 (662)
T ss_dssp TCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTT--CGGGSEESSCSCSSEECCCEECTTS-SEEEE
T ss_pred CCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccc--cCCceeEEEecCCCcccCceECCCC-CEEEE
Confidence 56788999999999999999887 68999998761000 000111112 235568889999965 58887
Q ss_pred EeCCC--------cEEEEECC-CC---cEEEE-------EEEEeecCCceEEEecCcc
Q 004998 675 SNFEG--------VVQVGQVL-HL---IYFSA-------LYCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 675 ~s~D~--------~v~lWDv~-tg---~~~~~-------v~~v~~~~~~~~~~~~~~~ 713 (720)
++.|+ .|.+||+. +| +.... +.+++|+|++.++..+.-+
T Consensus 205 ~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~ 262 (662)
T 3azo_A 205 LAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRT 262 (662)
T ss_dssp EEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTT
T ss_pred EECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCC
Confidence 77553 79999999 67 33221 7789999999866665544
No 422
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=97.89 E-value=1.3e-05 Score=94.44 Aligned_cols=92 Identities=11% Similarity=0.021 Sum_probs=69.5
Q ss_pred CeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCC------CEEEEEEecCCCCEEEEEeCC----
Q 004998 609 LVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRS------KLSSICWNSYIKSQIASSNFE---- 678 (720)
Q Consensus 609 ~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~------~i~~v~~~~~~~~~laS~s~D---- 678 (720)
...+++|+|||++|+++ |++|++||+.++. +...+.++. ....++|||++ .+||+++.|
T Consensus 18 ~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~Spdg-~~l~~~~~~~~~~ 86 (740)
T 4a5s_A 18 KLYSLRWISDHEYLYKQ--ENNILVFNAEYGN--------SSVFLENSTFDEFGHSINDYSISPDG-QFILLEYNYVKQW 86 (740)
T ss_dssp CCCCEEECSSSEEEEEE--TTEEEEEETTTCC--------EEEEECTTTTTTCCSCCCEEEECTTS-SEEEEEEEEEECS
T ss_pred cccccEECCCCcEEEEc--CCcEEEEECCCCc--------eEEEEechhhhhhcccccceEECCCC-CEEEEEECCeeeE
Confidence 35689999999999997 9999999988762 122222211 22458999965 588888876
Q ss_pred -----CcEEEEECCCCcEEEE------EEEEeecCCceEEEecC
Q 004998 679 -----GVVQVGQVLHLIYFSA------LYCIVLNKLLIIFRYGM 711 (720)
Q Consensus 679 -----~~v~lWDv~tg~~~~~------v~~v~~~~~~~~~~~~~ 711 (720)
+.+.|||+.+|++... +..++|||+|..+++++
T Consensus 87 r~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~~~SPdG~~la~~~ 130 (740)
T 4a5s_A 87 RHSYTASYDIYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYVW 130 (740)
T ss_dssp SSCEEEEEEEEETTTTEECCSSCCCTTEEEEEECSSTTCEEEEE
T ss_pred EEccceEEEEEECCCCcEEEcccCCCcceeeEECCCCCEEEEEE
Confidence 4556999999986542 88999999999999874
No 423
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=97.84 E-value=6e-06 Score=83.64 Aligned_cols=91 Identities=8% Similarity=0.009 Sum_probs=63.7
Q ss_pred eehhhhcccCCCCCc--eecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 65 HSDGVELTHGDHLRN--QGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnI--V~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
.+|..++..+.+.+| .+++. +...+ ...+++||| .|.+|. ... .. ...++.+++..|..||+..
T Consensus 61 ~~E~~~l~~l~~~~~~vP~~~~-~~~~~---~~~~~v~e~i~G~~l~--~~~----~~---~~~~~~~l~~~l~~lh~~~ 127 (264)
T 1nd4_A 61 QDEAARLSWLATTGVPCAAVLD-VVTEA---GRDWLLLGEVPGQDLL--SSH----LA---PAEKVSIMADAMRRLHTLD 127 (264)
T ss_dssp HHHHHHHHHHHTTTCCBCCEEE-EEECS---SCEEEEEECCSSEETT--TSC----CC---HHHHHHHHHHHHHHHTTSC
T ss_pred hHHHHHHHHHHhCCCCCCeEEE-eccCC---CCCEEEEEecCCcccC--cCc----CC---HhHHHHHHHHHHHHHhCCC
Confidence 356667766654443 45666 33333 247999999 888874 211 22 2356778888888888643
Q ss_pred ----------------------------------------------------------ceeccCCCCcEEEccCCceEEe
Q 004998 142 ----------------------------------------------------------IVVHNVRPSCFVMSSFNHVSFI 163 (720)
Q Consensus 142 ----------------------------------------------------------IvHrDLKP~NILl~~~~~vkli 163 (720)
++|+|++|.|||++.++.+.|+
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~li 207 (264)
T 1nd4_A 128 PATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFI 207 (264)
T ss_dssp GGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEEC
T ss_pred CCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEE
Confidence 9999999999999876556799
Q ss_pred ccCcc
Q 004998 164 ESASC 168 (720)
Q Consensus 164 Dfg~a 168 (720)
||+.+
T Consensus 208 D~~~a 212 (264)
T 1nd4_A 208 DCGRL 212 (264)
T ss_dssp CCTTC
T ss_pred cchhc
Confidence 99987
No 424
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=97.82 E-value=8.6e-05 Score=78.70 Aligned_cols=91 Identities=11% Similarity=0.084 Sum_probs=61.5
Q ss_pred CCCCeEEEEECCCCCEEEEeeC--CCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEe-CCCcEE
Q 004998 606 SSNLVCSLSFDRDGELFAAAGV--NKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSN-FEGVVQ 682 (720)
Q Consensus 606 ~~~~V~sv~f~~dg~~lat~~~--d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s-~D~~v~ 682 (720)
+...+.+++|+|||++|++++. +++|.|||+...... . ..+..+.....+.+++|+|+++ +|++++ .+++|.
T Consensus 257 ~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~---~-~~~~~~~~g~~~~~~~~spdg~-~l~~~~~~~~~v~ 331 (361)
T 3scy_A 257 NAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGT---L-TKVGYQLTGIHPRNFIITPNGK-YLLVACRDTNVIQ 331 (361)
T ss_dssp CCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCC---E-EEEEEEECSSCCCEEEECTTSC-EEEEEETTTTEEE
T ss_pred CCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCc---E-EEeeEecCCCCCceEEECCCCC-EEEEEECCCCCEE
Confidence 3456789999999998755554 589999998522100 0 1233333345678999999754 666666 689999
Q ss_pred EE--ECCCCcEEEE--------EEEEeec
Q 004998 683 VG--QVLHLIYFSA--------LYCIVLN 701 (720)
Q Consensus 683 lW--Dv~tg~~~~~--------v~~v~~~ 701 (720)
|| |..+|+.... ..||.|.
T Consensus 332 v~~~d~~~g~~~~~~~~~~~~~p~~v~~~ 360 (361)
T 3scy_A 332 IFERDQATGLLTDIKKDIKVDKPVCLKFV 360 (361)
T ss_dssp EEEECTTTCCEEECSCCEECSSEEEEEEE
T ss_pred EEEEECCCCcEeecceeeeCCCCeEEEEc
Confidence 95 6678876543 5677664
No 425
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=97.73 E-value=0.00014 Score=76.25 Aligned_cols=94 Identities=13% Similarity=0.083 Sum_probs=65.2
Q ss_pred CCeEEEEECCCCCEEEEeeCC---Cc--EEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCC----
Q 004998 608 NLVCSLSFDRDGELFAAAGVN---KK--IKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFE---- 678 (720)
Q Consensus 608 ~~V~sv~f~~dg~~lat~~~d---~~--i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D---- 678 (720)
..+.+++|+|||++||.++.+ +. |.+||+.++. +........ +.+++|+|++ ..||.++.+
T Consensus 59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~--------~~~l~~~~~-~~~~~wspdg-~~l~~~~~~~~~~ 128 (347)
T 2gop_A 59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLS--------SKKILEAKN-IRSLEWNEDS-RKLLIVGFKRRED 128 (347)
T ss_dssp ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTE--------EEEEEEESE-EEEEEECTTS-SEEEEEEECCCC-
T ss_pred ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCc--------eEEEEcCCC-ccceeECCCC-CEEEEEEccCCCc
Confidence 347889999999999988764 33 7777876541 222222233 9999999975 567766532
Q ss_pred -----------------------CcEEEEECCCCcEEEE-----EEEEeecCCceEEEecCc
Q 004998 679 -----------------------GVVQVGQVLHLIYFSA-----LYCIVLNKLLIIFRYGMF 712 (720)
Q Consensus 679 -----------------------~~v~lWDv~tg~~~~~-----v~~v~~~~~~~~~~~~~~ 712 (720)
..|.+||+.+|+.+.. +.+++|+|.+ ++..+..
T Consensus 129 ~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~spdg-~~~~~~~ 189 (347)
T 2gop_A 129 EDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEKPRFSSGIWHRDK-IVVNVPH 189 (347)
T ss_dssp --------CCCC---------CEEEEEEEETTTTEEEEEEEEETTCEEEEETTE-EEEEEEC
T ss_pred CCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecCCCcccccCCCCe-EEEEEec
Confidence 5799999999987444 3468999999 5555544
No 426
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=97.65 E-value=0.0004 Score=74.09 Aligned_cols=95 Identities=6% Similarity=-0.129 Sum_probs=67.1
Q ss_pred CCCCeEEEEECCCCCEEEEeeC-CCcEEEeeCC-cccccccccccceEEec---CCCCEEEEEEecCCCCEEEEEe-CCC
Q 004998 606 SSNLVCSLSFDRDGELFAAAGV-NKKIKVFECD-AIINENRDIHYPVVEMA---SRSKLSSICWNSYIKSQIASSN-FEG 679 (720)
Q Consensus 606 ~~~~V~sv~f~~dg~~lat~~~-d~~i~iwd~~-~~~~~~~~~~~~~~~~~---~~~~i~~v~~~~~~~~~laS~s-~D~ 679 (720)
+...+.+++|+|||+++++++. +.+|++||+. ++.. .++..+. +...+..++|+|++ .+|+.++ .++
T Consensus 143 ~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~------~~~~~~~~~~~g~~p~~~~~spdg-~~l~v~~~~~~ 215 (365)
T 1jof_A 143 ENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEV------ELVGSVDAPDPGDHPRWVAMHPTG-NYLYALMEAGN 215 (365)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCE------EEEEEEECSSTTCCEEEEEECTTS-SEEEEEETTTT
T ss_pred CCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCE------EEeeeEecCCCCCCCCEeEECCCC-CEEEEEECCCC
Confidence 4567999999999998777654 6899999987 4310 1222222 24568999999975 4776666 478
Q ss_pred cEEEEECC--CCcEE------E-----------------EEEEEe-ecCCceEE
Q 004998 680 VVQVGQVL--HLIYF------S-----------------ALYCIV-LNKLLIIF 707 (720)
Q Consensus 680 ~v~lWDv~--tg~~~------~-----------------~v~~v~-~~~~~~~~ 707 (720)
+|.+|++. +|+.. . .+.+++ |+|++..+
T Consensus 216 ~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l 269 (365)
T 1jof_A 216 RICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYM 269 (365)
T ss_dssp EEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEE
T ss_pred eEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEE
Confidence 99999764 67642 1 356788 99999754
No 427
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=97.60 E-value=0.00027 Score=75.67 Aligned_cols=82 Identities=11% Similarity=0.067 Sum_probs=62.0
Q ss_pred EEECCCCCEEEEeeC-----------CCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcE
Q 004998 613 LSFDRDGELFAAAGV-----------NKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVV 681 (720)
Q Consensus 613 v~f~~dg~~lat~~~-----------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~v 681 (720)
++|+|||..+..+.. +.+|.+||.++. ..+..+.... ..+|+|+|+++ +|++++. ++|
T Consensus 259 ~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~--------~~v~~i~~~~-p~~ia~spdg~-~l~v~n~-~~v 327 (361)
T 2oiz_A 259 VGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTK--------QRVARIPGRD-ALSMTIDQQRN-LMLTLDG-GNV 327 (361)
T ss_dssp EEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTT--------EEEEEEECTT-CCEEEEETTTT-EEEEECS-SCE
T ss_pred EEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCC--------cEEEEEecCC-eeEEEECCCCC-EEEEeCC-CeE
Confidence 689999876444322 458999998776 2444554444 89999999765 8888886 999
Q ss_pred EEEECCCC--cEEEEE-------EEEeecCCce
Q 004998 682 QVGQVLHL--IYFSAL-------YCIVLNKLLI 705 (720)
Q Consensus 682 ~lWDv~tg--~~~~~v-------~~v~~~~~~~ 705 (720)
.|||+.|+ +.+.++ +.++|+|.|.
T Consensus 328 ~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 328 NVYDISQPEPKLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp EEEECSSSSCEEEEEETTSCSSEEEEEECCCSC
T ss_pred EEEECCCCcceeeEEeccCCCCcEEEEecCCCC
Confidence 99999999 998884 6677777653
No 428
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=97.58 E-value=0.00086 Score=68.33 Aligned_cols=93 Identities=12% Similarity=0.078 Sum_probs=71.9
Q ss_pred CCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecC---CCCEEEEEEecCCCCEEEEEeCCC-cEE
Q 004998 607 SNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS---RSKLSSICWNSYIKSQIASSNFEG-VVQ 682 (720)
Q Consensus 607 ~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~---~~~i~~v~~~~~~~~~laS~s~D~-~v~ 682 (720)
...+.+|+|+++|.++++.+.+++|++||.... .+..+.. -.....|+++|++ +++++...++ .|.
T Consensus 163 ~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~g~---------~~~~~~~~g~~~~p~~i~~d~~G-~l~v~~~~~~~~i~ 232 (286)
T 1q7f_A 163 LEFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQ---------YLRQIGGEGITNYPIGVGINSNG-EILIADNHNNFNLT 232 (286)
T ss_dssp CSSEEEEEECSSSEEEEEEGGGTEEEEEETTCC---------EEEEESCTTTSCSEEEEEECTTC-CEEEEECSSSCEEE
T ss_pred cCCcEEEEECCCCCEEEEECCCCEEEEEcCCCC---------EEEEEccCCccCCCcEEEECCCC-CEEEEeCCCCEEEE
Confidence 457899999999999999888999999996432 1222322 2468899999964 6888877776 999
Q ss_pred EEECCCCcEEEE---------EEEEeecCCceEEEec
Q 004998 683 VGQVLHLIYFSA---------LYCIVLNKLLIIFRYG 710 (720)
Q Consensus 683 lWDv~tg~~~~~---------v~~v~~~~~~~~~~~~ 710 (720)
+||. +|+.+.+ .++++|++.+.+++++
T Consensus 233 ~~~~-~g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs~ 268 (286)
T 1q7f_A 233 IFTQ-DGQLISALESKVKHAQCFDVALMDDGSVVLAS 268 (286)
T ss_dssp EECT-TSCEEEEEEESSCCSCEEEEEEETTTEEEEEE
T ss_pred EECC-CCCEEEEEcccCCCCcceeEEECCCCcEEEEC
Confidence 9995 5666654 4689999999988885
No 429
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=97.54 E-value=0.00028 Score=75.19 Aligned_cols=88 Identities=9% Similarity=-0.054 Sum_probs=61.1
Q ss_pred EEEECCCCCEEEEeeC-CCc--EEEeeCCcccccccccccceEEecC-CCCEEEEEEecCCCCEEEEEeCCCcEEEEECC
Q 004998 612 SLSFDRDGELFAAAGV-NKK--IKVFECDAIINENRDIHYPVVEMAS-RSKLSSICWNSYIKSQIASSNFEGVVQVGQVL 687 (720)
Q Consensus 612 sv~f~~dg~~lat~~~-d~~--i~iwd~~~~~~~~~~~~~~~~~~~~-~~~i~~v~~~~~~~~~laS~s~D~~v~lWDv~ 687 (720)
..+|+|||++||.++. +++ |.+||..+.. +.....+ ...+..++|+|++ ..||.++.|+.|.+||+.
T Consensus 40 ~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~--------~~~lt~~~~~~~~~~~~spdg-~~l~~~~~~~~l~~~d~~ 110 (388)
T 3pe7_A 40 QKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQV--------ATQLTEGRGDNTFGGFLSPDD-DALFYVKDGRNLMRVDLA 110 (388)
T ss_dssp SCCBCTTSCEEEEEECTTSSCEEEEEETTTCE--------EEECCCSSCBCSSSCEECTTS-SEEEEEETTTEEEEEETT
T ss_pred CccCCCCCCEEEEEEcCCCCceEEEEeCCCCc--------eEEeeeCCCCCccceEEcCCC-CEEEEEeCCCeEEEEECC
Confidence 3889999999999988 664 8888877652 1111122 2234467899965 589999999999999999
Q ss_pred CCcEEEE-------EEEE--eecCCceEEE
Q 004998 688 HLIYFSA-------LYCI--VLNKLLIIFR 708 (720)
Q Consensus 688 tg~~~~~-------v~~v--~~~~~~~~~~ 708 (720)
+|+.... +... .+++.+..+.
T Consensus 111 ~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~ 140 (388)
T 3pe7_A 111 TLEENVVYQVPAEWVGYGTWVANSDCTKLV 140 (388)
T ss_dssp TCCEEEEEECCTTEEEEEEEEECTTSSEEE
T ss_pred CCcceeeeechhhcccccceeECCCCCeec
Confidence 9986543 2222 3477776665
No 430
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=97.53 E-value=0.00013 Score=85.86 Aligned_cols=96 Identities=14% Similarity=0.056 Sum_probs=69.6
Q ss_pred CCeEEEEECCCCCEEEEeeCC-----CcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCc--
Q 004998 608 NLVCSLSFDRDGELFAAAGVN-----KKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGV-- 680 (720)
Q Consensus 608 ~~V~sv~f~~dg~~lat~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~-- 680 (720)
..+.+++|||||++||.++.+ .+|+|||+.++. .+.......++..++|+|+ ..|+.+++|+.
T Consensus 163 ~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~--------~~~~~~~~~~~~~~~wspD--~~l~~~~~~~~~~ 232 (741)
T 1yr2_A 163 TALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGK--------PLADELKWVKFSGLAWLGN--DALLYSRFAEPKE 232 (741)
T ss_dssp EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCC--------EEEEEEEEEESCCCEESTT--SEEEEEECCCC--
T ss_pred EEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCC--------CCCccCCCceeccEEEECC--CEEEEEEecCccc
Confidence 467899999999999987664 579999998762 1111111223468899997 57777777765
Q ss_pred ------------EEEEECCCCc----EEEE-------EEEEeecCCceEEEecCcc
Q 004998 681 ------------VQVGQVLHLI----YFSA-------LYCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 681 ------------v~lWDv~tg~----~~~~-------v~~v~~~~~~~~~~~~~~~ 713 (720)
|.+|++.|++ .+.+ +.++.|++++..++..+.+
T Consensus 233 ~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~ 288 (741)
T 1yr2_A 233 GQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSE 288 (741)
T ss_dssp ------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEEC
T ss_pred ccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEc
Confidence 8999998886 3332 6789999999877766543
No 431
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=97.51 E-value=0.00087 Score=69.87 Aligned_cols=97 Identities=11% Similarity=0.008 Sum_probs=74.2
Q ss_pred CCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCC----Cc
Q 004998 606 SSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFE----GV 680 (720)
Q Consensus 606 ~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~v~~~~~~~~~laS~s~D----~~ 680 (720)
+...+.+++|+|||++++++..++.|.+||..+.. ..... .....+.+++|+|++ .+++++..+ +.
T Consensus 43 ~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~--------~~~~~~~~~~~~~~i~~~~dg-~l~v~~~~~~~~~~~ 113 (333)
T 2dg1_A 43 KGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKE--------IKRPFVSHKANPAAIKIHKDG-RLFVCYLGDFKSTGG 113 (333)
T ss_dssp SCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCC--------EEEEEECSSSSEEEEEECTTS-CEEEEECTTSSSCCE
T ss_pred cCccccCcEECCCCCEEEEECCCCEEEEEeCCCCc--------EEEEeeCCCCCcceEEECCCC-cEEEEeCCCCCCCce
Confidence 35678999999999999999999999999986541 11111 235679999999965 577776666 68
Q ss_pred EEEEECCCCcEEE---------EEEEEeecCCceEEEecC
Q 004998 681 VQVGQVLHLIYFS---------ALYCIVLNKLLIIFRYGM 711 (720)
Q Consensus 681 v~lWDv~tg~~~~---------~v~~v~~~~~~~~~~~~~ 711 (720)
|.+||..+++... .++++++++.+.++..++
T Consensus 114 i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~ 153 (333)
T 2dg1_A 114 IFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDF 153 (333)
T ss_dssp EEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEEC
T ss_pred EEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEec
Confidence 9999998886531 178899999998887765
No 432
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=97.48 E-value=0.0014 Score=68.90 Aligned_cols=97 Identities=14% Similarity=0.146 Sum_probs=71.5
Q ss_pred CCCCCeEEEEECC-CCCEEEEee-CCCcEEEeeCCcccccccccccceEEecC-----------CCCEEEEEEecCCCCE
Q 004998 605 NSSNLVCSLSFDR-DGELFAAAG-VNKKIKVFECDAIINENRDIHYPVVEMAS-----------RSKLSSICWNSYIKSQ 671 (720)
Q Consensus 605 ~~~~~V~sv~f~~-dg~~lat~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-----------~~~i~~v~~~~~~~~~ 671 (720)
++-...++|+|+| +|.++++.+ .+++|++||.... .+..+.. -.....|+++|+.+.+
T Consensus 140 ~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~g~---------~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l 210 (329)
T 3fvz_A 140 NHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPSGK---------FVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQL 210 (329)
T ss_dssp TCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTTSC---------EEEEECEECCSSSCCTTEESCEEEEEEETTTTEE
T ss_pred cccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCCCC---------EEEEeccCCCCCCCCCcccCCCcEEEEECCCCEE
Confidence 4456789999999 899999987 7999999994322 1111111 1237899999976777
Q ss_pred EEEEeCCCcEEEEECCCCcEEEE---------EEEEeecCCceEEEec
Q 004998 672 IASSNFEGVVQVGQVLHLIYFSA---------LYCIVLNKLLIIFRYG 710 (720)
Q Consensus 672 laS~s~D~~v~lWDv~tg~~~~~---------v~~v~~~~~~~~~~~~ 710 (720)
+++...++.|++||..+|+.+.+ +++++|+|...+...|
T Consensus 211 ~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g 258 (329)
T 3fvz_A 211 CVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNG 258 (329)
T ss_dssp EEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEEC
T ss_pred EEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeCC
Confidence 78888899999999999998876 5788999933333333
No 433
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=97.47 E-value=0.00011 Score=78.45 Aligned_cols=94 Identities=11% Similarity=0.049 Sum_probs=65.2
Q ss_pred CCeEEEEECCCCCEEEEeeCCCcEEEeeCC-cccccccccccceEEecCCCCEEEEEEecCCCC-EEEEEe---------
Q 004998 608 NLVCSLSFDRDGELFAAAGVNKKIKVFECD-AIINENRDIHYPVVEMASRSKLSSICWNSYIKS-QIASSN--------- 676 (720)
Q Consensus 608 ~~V~sv~f~~dg~~lat~~~d~~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~-~laS~s--------- 676 (720)
..+..++|+|||++|++++.+ +|.+||+. ++. . ..+......+...+++|+|+++. +|++++
T Consensus 40 ~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~--~----~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~ 112 (365)
T 1jof_A 40 EPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTE--I----VHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYAN 112 (365)
T ss_dssp CCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTE--E----EEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEE
T ss_pred CCCcEEEECCCCCEEEEEccc-eEEEEEECCCCC--E----EEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccc
Confidence 457899999999999999888 99999975 331 0 01111111123567899997543 466765
Q ss_pred ----CCCcEEEEECC-CCcEEEE-----------EEEEeecCCceEEE
Q 004998 677 ----FEGVVQVGQVL-HLIYFSA-----------LYCIVLNKLLIIFR 708 (720)
Q Consensus 677 ----~D~~v~lWDv~-tg~~~~~-----------v~~v~~~~~~~~~~ 708 (720)
.|++|++|++. .|+.... +.+++|+|.+..+.
T Consensus 113 ~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~ 160 (365)
T 1jof_A 113 PFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLY 160 (365)
T ss_dssp EESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEE
T ss_pred eeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEE
Confidence 69999999997 5654322 56899999997544
No 434
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=97.40 E-value=0.0019 Score=65.74 Aligned_cols=103 Identities=8% Similarity=0.018 Sum_probs=74.8
Q ss_pred CCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-------CCCCEEEEEEecCCCCEEE
Q 004998 601 GDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-------SRSKLSSICWNSYIKSQIA 673 (720)
Q Consensus 601 ~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-------~~~~i~~v~~~~~~~~~la 673 (720)
|.-.++-..+.+|+++++|.++++.+.+++|.+||.... .+..+. +...+.++++++..+.+++
T Consensus 23 g~~~g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g~---------~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v 93 (286)
T 1q7f_A 23 GVMEGQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGR---------FKFQFGECGKRDSQLLYPNRVAVVRNSGDIIV 93 (286)
T ss_dssp SSSTTCBSCEEEEEECTTCCEEEEEGGGTEEEEECTTSC---------EEEEECCBSSSTTCBSSEEEEEEETTTTEEEE
T ss_pred CCCCCccCCCceEEECCCCCEEEEECCCCEEEEECCCCc---------EEEEecccCCCcccccCceEEEEEcCCCeEEE
Confidence 344455677999999999999999999999999996532 111221 1245889999643455555
Q ss_pred EEeC-CCcEEEEECCCCcEEEE--------EEEEeecCCceEEEecCcc
Q 004998 674 SSNF-EGVVQVGQVLHLIYFSA--------LYCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 674 S~s~-D~~v~lWDv~tg~~~~~--------v~~v~~~~~~~~~~~~~~~ 713 (720)
+... ++.|.+|| .+|+.+.+ ..++++++.+.+++.++.+
T Consensus 94 ~~~~~~~~i~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~ 141 (286)
T 1q7f_A 94 TERSPTHQIQIYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKV 141 (286)
T ss_dssp EECGGGCEEEEEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTT
T ss_pred EcCCCCCEEEEEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCC
Confidence 5533 89999999 67777654 6789999999888877654
No 435
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=97.39 E-value=0.00034 Score=80.72 Aligned_cols=100 Identities=8% Similarity=-0.015 Sum_probs=68.6
Q ss_pred CCCCCeEEEEECCCCCEEEEeeCCC--------cEEEeeCC-cccccccccccceEEecC-CCCEEEEEEecCCCCEEEE
Q 004998 605 NSSNLVCSLSFDRDGELFAAAGVNK--------KIKVFECD-AIINENRDIHYPVVEMAS-RSKLSSICWNSYIKSQIAS 674 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~~lat~~~d~--------~i~iwd~~-~~~~~~~~~~~~~~~~~~-~~~i~~v~~~~~~~~~laS 674 (720)
.+...+.+++|+|||++||.++.++ .|++||+. ++. ...+.....+ ...+..++|+|+++ ++++
T Consensus 185 ~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~-----~~~~~~l~~~~~~~~~~~~~spdg~-l~~~ 258 (662)
T 3azo_A 185 DAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGR-----FADTRTLLGGPEEAIAQAEWAPDGS-LIVA 258 (662)
T ss_dssp SCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSC-----EEEEEEEEEETTBCEEEEEECTTSC-EEEE
T ss_pred cCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCc-----ccccEEeCCCCCceEcceEECCCCe-EEEE
Confidence 4457888999999999999888664 79999986 330 0011222222 56799999999876 8899
Q ss_pred EeCCC--cEEEEECCCCcEEEE---------------EEEEeecCCceEEEec
Q 004998 675 SNFEG--VVQVGQVLHLIYFSA---------------LYCIVLNKLLIIFRYG 710 (720)
Q Consensus 675 ~s~D~--~v~lWDv~tg~~~~~---------------v~~v~~~~~~~~~~~~ 710 (720)
++.|+ .|.+||+.+|+.... +.+++|++.+.++.++
T Consensus 259 ~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~ 311 (662)
T 3azo_A 259 TDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVH 311 (662)
T ss_dssp ECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEE
T ss_pred ECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEE
Confidence 99999 455556667765432 2356777766666554
No 436
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=97.35 E-value=0.002 Score=67.58 Aligned_cols=98 Identities=15% Similarity=0.011 Sum_probs=74.2
Q ss_pred CCCeEEEEECCC-CCEEEEeeCCCcEEEeeCCcccccccccccceEEe---cCCCCEEEEEEecCCCCEEEEEe------
Q 004998 607 SNLVCSLSFDRD-GELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM---ASRSKLSSICWNSYIKSQIASSN------ 676 (720)
Q Consensus 607 ~~~V~sv~f~~d-g~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~---~~~~~i~~v~~~~~~~~~laS~s------ 676 (720)
-....+|+|+|+ |.++++...+++|++||..++. .+..+ .....+..++|+| +..+++.+
T Consensus 195 ~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~--------~~~~~~~~~~~~~~~~~~~~p--g~~~~~~g~~~v~~ 264 (329)
T 3fvz_A 195 FSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKE--------FVREIKHASFGRNVFAISYIP--GFLFAVNGKPYFGD 264 (329)
T ss_dssp ESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCC--------EEEEECCTTTTTCEEEEEEET--TEEEEEECCCCTTC
T ss_pred cCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCc--------EEEEEeccccCCCcceeeecC--CEEEEeCCCEEecc
Confidence 356899999999 8889999999999999987441 22222 1245688999999 32333332
Q ss_pred -CCCcEEEEECCCCcEEEE----------EEEEeecCCceEEEecCccc
Q 004998 677 -FEGVVQVGQVLHLIYFSA----------LYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 677 -~D~~v~lWDv~tg~~~~~----------v~~v~~~~~~~~~~~~~~~~ 714 (720)
.+.+|++||..+|+.+.+ .++|++++.+.+++++..+.
T Consensus 265 ~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~ 313 (329)
T 3fvz_A 265 QEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTN 313 (329)
T ss_dssp SCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSC
T ss_pred CCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCC
Confidence 345999999999998876 57899999999998887654
No 437
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=97.32 E-value=0.00068 Score=72.10 Aligned_cols=99 Identities=6% Similarity=-0.070 Sum_probs=68.6
Q ss_pred CCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEE--ecCCCCEEEE---------
Q 004998 606 SSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICW--NSYIKSQIAS--------- 674 (720)
Q Consensus 606 ~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~--~~~~~~~laS--------- 674 (720)
+...+.+++|+|||+.||.++.++.|++||+.+.... .+... +...+....| +|++ .+|+.
T Consensus 79 ~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~------~~~~~-~~~~~~~~~~~~~~dg-~~l~~~~~~~~~~~ 150 (388)
T 3pe7_A 79 RGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEEN------VVYQV-PAEWVGYGTWVANSDC-TKLVGIEIRREDWV 150 (388)
T ss_dssp SCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEE------EEEEC-CTTEEEEEEEEECTTS-SEEEEEEEEGGGCC
T ss_pred CCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcce------eeeec-hhhcccccceeECCCC-CeeccccccCcccc
Confidence 3445557789999999999999999999998876210 11111 2334444444 7754 46663
Q ss_pred -------------EeCCCcEEEEECCCCcEEEE------EEEEeecC-CceEEEecCc
Q 004998 675 -------------SNFEGVVQVGQVLHLIYFSA------LYCIVLNK-LLIIFRYGMF 712 (720)
Q Consensus 675 -------------~s~D~~v~lWDv~tg~~~~~------v~~v~~~~-~~~~~~~~~~ 712 (720)
.+.+..|.+||+.+|+.... +..++|+| .+..+++.+-
T Consensus 151 ~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~sp~dg~~l~~~~~ 208 (388)
T 3pe7_A 151 PLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQENQWLGHPIYRPYDDSTVAFCHE 208 (388)
T ss_dssp CCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEEC
T ss_pred cccccchhhhhhccCCcceEEEEECCCCceEEeecCCccccccEECCCCCCEEEEEEe
Confidence 33567899999999975443 67899999 9987776553
No 438
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.27 E-value=0.00045 Score=73.46 Aligned_cols=96 Identities=9% Similarity=-0.091 Sum_probs=62.3
Q ss_pred CCCCeEEEEECCCCCEEEEeeCC---CcEEEeeCCcccccccccccceEEecCCCCE-EEEEEecCCCCEEEEEeCCCcE
Q 004998 606 SSNLVCSLSFDRDGELFAAAGVN---KKIKVFECDAIINENRDIHYPVVEMASRSKL-SSICWNSYIKSQIASSNFEGVV 681 (720)
Q Consensus 606 ~~~~V~sv~f~~dg~~lat~~~d---~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i-~~v~~~~~~~~~laS~s~D~~v 681 (720)
|...+.+++|+|||++||.++.. ..|.+||..+.. +.....+...+ .++.|+|++ .+||.++.++.|
T Consensus 34 ~~~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~--------~~~l~~~~~~~~~~~~~spdg-~~l~~~~~~~~l 104 (396)
T 3c5m_A 34 HRNYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQ--------AVQLTEGKGDNTFGGFISTDE-RAFFYVKNELNL 104 (396)
T ss_dssp ECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTE--------EEECCCSSCBCTTTCEECTTS-SEEEEEETTTEE
T ss_pred cceeeecCcCCCCCCEEEEEEecCCCceEEEEECCCCc--------EEEeecCCCCccccceECCCC-CEEEEEEcCCcE
Confidence 34557889999999998877543 478888976652 11111122232 347899965 689999989999
Q ss_pred EEEECCCCcEEEEEE-EEeecCCceEEEec
Q 004998 682 QVGQVLHLIYFSALY-CIVLNKLLIIFRYG 710 (720)
Q Consensus 682 ~lWDv~tg~~~~~v~-~v~~~~~~~~~~~~ 710 (720)
.+||+.+|+...... ...|++.+..+++.
T Consensus 105 ~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~ 134 (396)
T 3c5m_A 105 MKVDLETLEEQVIYTVDEEWKGYGTWVANS 134 (396)
T ss_dssp EEEETTTCCEEEEEECCTTEEEEEEEEECT
T ss_pred EEEECCCCCcEEEEecccccCCCCCEEEec
Confidence 999999987654321 11344555444443
No 439
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=97.26 E-value=0.0013 Score=67.55 Aligned_cols=93 Identities=11% Similarity=-0.052 Sum_probs=72.0
Q ss_pred CCCeEEEEECCCCC-EEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEE
Q 004998 607 SNLVCSLSFDRDGE-LFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQ 685 (720)
Q Consensus 607 ~~~V~sv~f~~dg~-~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~v~lWD 685 (720)
.....+++|+|+|+ +++++..++.|.+||..+.. . ........+.+++|+|++ .++++...++.|.+||
T Consensus 27 ~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~~-~--------~~~~~~~~~~~l~~~~dg-~l~v~~~~~~~i~~~d 96 (296)
T 3e5z_A 27 FTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQL-S--------PEMHPSHHQNGHCLNKQG-HLIACSHGLRRLERQR 96 (296)
T ss_dssp CSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSCE-E--------EEESSCSSEEEEEECTTC-CEEEEETTTTEEEEEC
T ss_pred CccccCCeEeCCCCEEEEEeCCCCEEEEEECCCCe-E--------EEECCCCCcceeeECCCC-cEEEEecCCCeEEEEc
Confidence 46688999999998 88898999999999976541 1 111234568999999964 5777777779999999
Q ss_pred CCCCcEEEE-----------EEEEeecCCceEEEe
Q 004998 686 VLHLIYFSA-----------LYCIVLNKLLIIFRY 709 (720)
Q Consensus 686 v~tg~~~~~-----------v~~v~~~~~~~~~~~ 709 (720)
..+|+.... ++.+++++.+.++++
T Consensus 97 ~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vt 131 (296)
T 3e5z_A 97 EPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFS 131 (296)
T ss_dssp STTCCEEEEECEETTEECCCCCCEEECTTSCEEEE
T ss_pred CCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEE
Confidence 998875432 346899999998886
No 440
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=97.18 E-value=0.00021 Score=74.57 Aligned_cols=103 Identities=8% Similarity=0.015 Sum_probs=70.6
Q ss_pred eeeehhhhcccCC-CCCc--eecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 004998 63 RKHSDGVELTHGD-HLRN--QGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 63 r~~~e~~~Ls~l~-HpnI--V~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
+..+|..+|..+. +..| .+++. ...........|+|||+ .|.+|.+... ..++..+...++.|++..|..||
T Consensus 56 ~~~~E~~~l~~l~~~~~v~vP~~~~-~~~~~~~~~~~~~vm~~i~G~~l~~~~~---~~l~~~~~~~~~~~l~~~la~LH 131 (304)
T 3sg8_A 56 NLFNEVNILKRIHNKLPLPIPEVVF-TGMPSETYQMSFAGFTKIKGVPLTPLLL---NNLPKQSQNQAAKDLARFLSELH 131 (304)
T ss_dssp HHHHHHHHHHHHTTSSSSCCCCEEE-ECCCCSSCSCSCEEEECCCCEECCHHHH---HTSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCCceEe-ecCCCCCCCcceEEEcccCCeECCcccc---ccCCHHHHHHHHHHHHHHHHHHH
Confidence 4446666776652 3222 23333 22222222245889999 8888865332 23788888899999999999999
Q ss_pred H----------------------------------------------------------cCceeccCCCCcEEEcc--CC
Q 004998 139 S----------------------------------------------------------QGIVVHNVRPSCFVMSS--FN 158 (720)
Q Consensus 139 s----------------------------------------------------------~gIvHrDLKP~NILl~~--~~ 158 (720)
+ ..++|+|++|.||+++. .+
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~ 211 (304)
T 3sg8_A 132 SINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNT 211 (304)
T ss_dssp HSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTE
T ss_pred cCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCC
Confidence 6 24799999999999997 45
Q ss_pred ceEEeccCccc
Q 004998 159 HVSFIESASCS 169 (720)
Q Consensus 159 ~vkliDfg~a~ 169 (720)
.+.++||+.+.
T Consensus 212 ~~~~iD~~~~~ 222 (304)
T 3sg8_A 212 ICGIIDFGDAA 222 (304)
T ss_dssp EEEECCCTTCE
T ss_pred EEEEEeCCCCc
Confidence 67899998874
No 441
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=97.16 E-value=0.0024 Score=72.81 Aligned_cols=93 Identities=15% Similarity=0.013 Sum_probs=68.9
Q ss_pred ccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCC--cccccccccccceEEecCCCCEEEEEEe-
Q 004998 589 FSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECD--AIINENRDIHYPVVEMASRSKLSSICWN- 665 (720)
Q Consensus 589 ~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~--~~~~~~~~~~~~~~~~~~~~~i~~v~~~- 665 (720)
-.+.++++++.. ...+..++|+|||+++.+++.|++|.+||+. +. ..+.++.....-..++|+
T Consensus 184 ~~t~~v~~~i~~------g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~--------~~v~~i~~G~~P~~ia~s~ 249 (567)
T 1qks_A 184 GSTYEIKTVLDT------GYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEP--------TTVAEIKIGSEARSIETSK 249 (567)
T ss_dssp TTTCCEEEEEEC------SSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSC--------CEEEEEECCSEEEEEEECC
T ss_pred CCCCeEEEEEeC------CCCccceEECCCCCEEEEEcCCCeEEEEECCCCCC--------cEeEEEecCCCCceeEEcc
Confidence 355677777765 2456799999999999889999999999985 33 133344333446799999
Q ss_pred ---cCCCCEEEEEeC-CCcEEEEECCCCcEEEEEE
Q 004998 666 ---SYIKSQIASSNF-EGVVQVGQVLHLIYFSALY 696 (720)
Q Consensus 666 ---~~~~~~laS~s~-D~~v~lWDv~tg~~~~~v~ 696 (720)
|+++ +|+.+++ +++|.|||..|.+.+.+|.
T Consensus 250 ~~~pDGk-~l~v~n~~~~~v~ViD~~t~~~~~~i~ 283 (567)
T 1qks_A 250 MEGWEDK-YAIAGAYWPPQYVIMDGETLEPKKIQS 283 (567)
T ss_dssp STTCTTT-EEEEEEEETTEEEEEETTTCCEEEEEE
T ss_pred ccCCCCC-EEEEEEccCCeEEEEECCCCcEEEEEe
Confidence 5655 6665554 6999999999999988753
No 442
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.10 E-value=0.0013 Score=69.83 Aligned_cols=93 Identities=10% Similarity=-0.146 Sum_probs=63.3
Q ss_pred CeEEEEECCCCCEEEEeeCC-----CcEEEeeCCcccccccccccceEEecCCCCEEEEEEec-CCCCEEEEEe------
Q 004998 609 LVCSLSFDRDGELFAAAGVN-----KKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNS-YIKSQIASSN------ 676 (720)
Q Consensus 609 ~V~sv~f~~dg~~lat~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~-~~~~~laS~s------ 676 (720)
.+.+++|+|||++||.++.+ ++|.+||+.+... ..+..+. ... ++|+| +++ +|++++
T Consensus 239 ~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~------~~l~~~~---~~~-~~~s~~dg~-~l~~~~~~~p~~ 307 (396)
T 3c5m_A 239 SCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLEN------EEVMVMP---PCS-HLMSNFDGS-LMVGDGCDAPVD 307 (396)
T ss_dssp EEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCE------EEEEECC---SEE-EEEECSSSS-EEEEEECCC---
T ss_pred cccceEECCCCCEEEEEecCCCCccceEEEEECCCCCe------EEeeeCC---CCC-CCccCCCCc-eEEEecCCccee
Confidence 57889999999988877655 5599999876521 0111111 234 89999 765 777654
Q ss_pred ----------CCCcEEEEECCCCcEEE--E---------------EEEEeecCCceEEEecCc
Q 004998 677 ----------FEGVVQVGQVLHLIYFS--A---------------LYCIVLNKLLIIFRYGMF 712 (720)
Q Consensus 677 ----------~D~~v~lWDv~tg~~~~--~---------------v~~v~~~~~~~~~~~~~~ 712 (720)
.+..|.+||+.+|+... . +.+++|++.+..+.+.+-
T Consensus 308 ~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~ 370 (396)
T 3c5m_A 308 VADADSYNIENDPFLYVLNTKAKSAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSD 370 (396)
T ss_dssp -------CCCCCCEEEEEETTTTBCCEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEEC
T ss_pred eccccccccCCCCcEEEEecccCceEEccCCCCccccccccccCCCCCceEccCCCeEEEEec
Confidence 34789999999886432 1 123689999887776553
No 443
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=97.06 E-value=0.0019 Score=63.63 Aligned_cols=59 Identities=12% Similarity=0.014 Sum_probs=45.9
Q ss_pred CCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH-cCceeccCCCCcEEEccCCceEE
Q 004998 104 DVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-QGIVVHNVRPSCFVMSSFNHVSF 162 (720)
Q Consensus 104 ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs-~gIvHrDLKP~NILl~~~~~vkl 162 (720)
..+|.+.|...+.+++++++|.++.|.+.+|.-+-. ..-..+=+-|..|+|..+|.|.+
T Consensus 32 ~vSL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~~~~~~~~i~~~~~i~l~~dG~V~f 91 (229)
T 2yle_A 32 ALSLEEILRLYNQPINEEQAWAVCYQCCGSLRAAARRRQPRHRVRSAAQIRVWRDGAVTL 91 (229)
T ss_dssp EEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSGGGEEEETTSCEEE
T ss_pred cccHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhhcccCCceecCCcceEEecCCceec
Confidence 458999998888889999999999999999877621 11123334568999999998887
No 444
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=97.04 E-value=0.0027 Score=68.77 Aligned_cols=86 Identities=6% Similarity=-0.116 Sum_probs=64.4
Q ss_pred CCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEEC
Q 004998 607 SNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQV 686 (720)
Q Consensus 607 ~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~v~lWDv 686 (720)
...|.++.+.+.. ||+++.||+|.+||+..... .. ....|+|+||||.+ ++.+..||+|++|+.
T Consensus 126 ~~~v~~i~~~~p~--~av~~~dG~L~v~dl~~~~~--------~~---~~~~Vs~v~WSpkG---~~vg~~dg~i~~~~~ 189 (388)
T 1xip_A 126 EKPVFQLKNVNNT--LVILNSVNDLSALDLRTKST--------KQ---LAQNVTSFDVTNSQ---LAVLLKDRSFQSFAW 189 (388)
T ss_dssp SSCEEEEEECSSE--EEEEETTSEEEEEETTTCCE--------EE---EEESEEEEEECSSE---EEEEETTSCEEEEEE
T ss_pred ecceeeEEecCCC--EEEEECCCCEEEEEccCCcc--------cc---ccCCceEEEEcCCc---eEEEEcCCcEEEEcC
Confidence 4557888877543 99999999999999876521 11 13479999999964 678889999999999
Q ss_pred CCCcE--EE----------------EEEEEeecCCceEEE
Q 004998 687 LHLIY--FS----------------ALYCIVLNKLLIIFR 708 (720)
Q Consensus 687 ~tg~~--~~----------------~v~~v~~~~~~~~~~ 708 (720)
.++++ .. .|.+|.|.+....++
T Consensus 190 ~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv 229 (388)
T 1xip_A 190 RNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLA 229 (388)
T ss_dssp ETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEE
T ss_pred CCccccccceecCCcccccccCCCeeEEEEEEecCCeEEE
Confidence 88774 22 278889987665544
No 445
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=97.02 E-value=0.0006 Score=71.74 Aligned_cols=94 Identities=5% Similarity=-0.021 Sum_probs=67.5
Q ss_pred eeehhhhcccCCC----CCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 004998 64 KHSDGVELTHGDH----LRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 64 ~~~e~~~Ls~l~H----pnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
.++|..+|..+.+ ..+.++++ + + ..|++||| .|.+|..... ..++..+...++.+++..|..||
T Consensus 74 ~~~E~~~L~~L~~~~~~~~vP~v~~-~---~----~~~lvme~i~G~~l~~~~~---~~l~~~~~~~~~~~l~~~La~LH 142 (320)
T 3r70_A 74 QKRELELYRFLENCKLSYQIPAVVY-Q---S----DRFNIMKYIKGERITYEQY---HKLSEKEKDALAYDEATFLKELH 142 (320)
T ss_dssp HHHHHHHHHHHTTSCCSSBCCCEEE-E---C----SSCEEEECCCCBCCCHHHH---TTSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCcceEEe-c---C----CcEEEEeecCCcccccccc---ccCCHHHHHHHHHHHHHHHHHHh
Confidence 3466666666655 12334444 1 1 34799999 8888864331 23678888889999999999999
Q ss_pred HcC---------------------------------------------------------------ceeccCCCCcEEEc
Q 004998 139 SQG---------------------------------------------------------------IVVHNVRPSCFVMS 155 (720)
Q Consensus 139 s~g---------------------------------------------------------------IvHrDLKP~NILl~ 155 (720)
+.. ++|+|++|.|||++
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~ 222 (320)
T 3r70_A 143 SIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFR 222 (320)
T ss_dssp HSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEE
T ss_pred CCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEE
Confidence 532 39999999999999
Q ss_pred cCCceEEeccCcc
Q 004998 156 SFNHVSFIESASC 168 (720)
Q Consensus 156 ~~~~vkliDfg~a 168 (720)
..+.+.++||+.+
T Consensus 223 ~~~~~~~iD~~~~ 235 (320)
T 3r70_A 223 NNRLFGVIDFGDF 235 (320)
T ss_dssp TTEEEEECCCTTC
T ss_pred CCceEEEECCccc
Confidence 8656799999987
No 446
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=96.92 E-value=0.0014 Score=70.20 Aligned_cols=89 Identities=12% Similarity=0.050 Sum_probs=63.2
Q ss_pred cceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEee----------CCCcEEEeeCCcccccccccccceEEec-----
Q 004998 590 SKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAG----------VNKKIKVFECDAIINENRDIHYPVVEMA----- 654 (720)
Q Consensus 590 ~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~----------~d~~i~iwd~~~~~~~~~~~~~~~~~~~----- 654 (720)
.+.+++.++.-| .+. .++|+|||+++.+++ .+++|.+||..+.. ++.++.
T Consensus 39 ~t~~~~~~i~~g-----~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~--------~~~~i~~~~~~ 103 (361)
T 2oiz_A 39 TNGKFLGMVPTA-----FNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLT--------FEKEISLPPKR 103 (361)
T ss_dssp TTCCEEEEEECC-----EEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCC--------EEEEEEECTTB
T ss_pred CCCeEEEEecCC-----CCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCc--------EEEEEEcCccc
Confidence 456666666532 233 899999999887775 37789999987651 222221
Q ss_pred --CCCCEEEEEEecCCCCEEEEEeC--CCcEEEEECCCCcEEEE
Q 004998 655 --SRSKLSSICWNSYIKSQIASSNF--EGVVQVGQVLHLIYFSA 694 (720)
Q Consensus 655 --~~~~i~~v~~~~~~~~~laS~s~--D~~v~lWDv~tg~~~~~ 694 (720)
+......++|+|+++ +|+.+.+ +++|.+||+.+++.+.+
T Consensus 104 ~~~g~~p~~i~~spdg~-~l~v~n~~~~~~v~v~d~~~~~~~~~ 146 (361)
T 2oiz_A 104 VQGLNYDGLFRQTTDGK-FIVLQNASPATSIGIVDVAKGDYVED 146 (361)
T ss_dssp CCBCCCGGGEEECTTSS-EEEEEEESSSEEEEEEETTTTEEEEE
T ss_pred cccCCCcceEEECCCCC-EEEEECCCCCCeEEEEECCCCcEEEE
Confidence 123456899999764 7777664 68999999999998877
No 447
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=96.92 E-value=0.0013 Score=68.72 Aligned_cols=101 Identities=7% Similarity=-0.088 Sum_probs=67.0
Q ss_pred eeeehhhhcccCCCCC---ceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 004998 63 RKHSDGVELTHGDHLR---NQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 63 r~~~e~~~Ls~l~Hpn---IV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
+..+|..+|..+.+.. |.+++. +... .....|++||+ .|.+|.+..-. .++..+...++.++...|..||
T Consensus 55 ~~~~E~~~L~~L~~~~~v~VP~~~~-~~~~--~~g~~~~v~e~i~G~~l~~~~~~---~l~~~~~~~~~~~lg~~La~LH 128 (306)
T 3tdw_A 55 ELNKEIQLLPLLVGCVKVNIPQYVY-IGKR--SDGNPFVGYRKVQGQILGEDGMA---VLPDDAKDRLALQLAEFMNELS 128 (306)
T ss_dssp HHHHHHHHHHHHTTTCSSBCCCEEE-EEEC--TTSCEEEEEECCCSEECHHHHHT---TSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCCCeEe-eccc--CCCceEEEEeccCCeECchhhhh---hCCHHHHHHHHHHHHHHHHHHh
Confidence 4557777887776532 334443 2221 12345799999 88888763211 2466666677777777777777
Q ss_pred Hc------------------------------------------------------------CceeccCCCCcEEEcc--
Q 004998 139 SQ------------------------------------------------------------GIVVHNVRPSCFVMSS-- 156 (720)
Q Consensus 139 s~------------------------------------------------------------gIvHrDLKP~NILl~~-- 156 (720)
+. .++|+|++|.|||++.
T Consensus 129 ~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~ 208 (306)
T 3tdw_A 129 AFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNS 208 (306)
T ss_dssp HSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTC
T ss_pred cCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCC
Confidence 42 3499999999999987
Q ss_pred -CCce-EEeccCccc
Q 004998 157 -FNHV-SFIESASCS 169 (720)
Q Consensus 157 -~~~v-kliDfg~a~ 169 (720)
++.+ .|+||+.+.
T Consensus 209 ~~~~~~~~iD~~~a~ 223 (306)
T 3tdw_A 209 RQTPLTGIIDFGDAA 223 (306)
T ss_dssp SSCCEEEECCCTTCE
T ss_pred CCCceEEEEehhhcC
Confidence 4564 899998773
No 448
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=96.86 E-value=0.0024 Score=74.61 Aligned_cols=92 Identities=17% Similarity=0.200 Sum_probs=65.0
Q ss_pred CCCeEEEEECCCCCEEE-----EeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCc-
Q 004998 607 SNLVCSLSFDRDGELFA-----AAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGV- 680 (720)
Q Consensus 607 ~~~V~sv~f~~dg~~la-----t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~- 680 (720)
...|.+++|||||++|| +|+...+|+|||+.++. .+.......+...++|+ ++ ..|+.+++|..
T Consensus 128 ~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~--------~~~~~~~~~k~~~~~Ws-Dg-~~l~y~~~~~~~ 197 (693)
T 3iuj_A 128 TTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQ--------PLETPLKDVKFSGISWL-GN-EGFFYSSYDKPD 197 (693)
T ss_dssp CCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCS--------EEEEEEEEEESCCCEEE-TT-TEEEEEESSCCC
T ss_pred cEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCC--------CCccccCCceeccEEEe-CC-CEEEEEEecCcc
Confidence 45788999999999998 44445799999998862 11111111224678999 65 47777777754
Q ss_pred ------------EEEEECCCCc----EEEE--------EEEEeecCCceEEE
Q 004998 681 ------------VQVGQVLHLI----YFSA--------LYCIVLNKLLIIFR 708 (720)
Q Consensus 681 ------------v~lWDv~tg~----~~~~--------v~~v~~~~~~~~~~ 708 (720)
|.+|++.|++ ++.+ +.++.|++++..+.
T Consensus 198 ~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~ 249 (693)
T 3iuj_A 198 GSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLL 249 (693)
T ss_dssp -------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEE
T ss_pred cccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEE
Confidence 9999998876 2321 46789999998774
No 449
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=96.76 E-value=0.0057 Score=64.19 Aligned_cols=110 Identities=6% Similarity=-0.022 Sum_probs=75.4
Q ss_pred ccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCC------CEE
Q 004998 587 LSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRS------KLS 660 (720)
Q Consensus 587 ~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~------~i~ 660 (720)
..-.++++++++.. ......|+|++||+++++...+++|.+||..+.. .+..+.... ...
T Consensus 69 iD~~t~~~~~~i~~------~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~--------~~~~i~~g~~~~~~~~p~ 134 (328)
T 3dsm_A 69 IDINTFKEVGRITG------FTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYE--------ITGYIECPDMDMESGSTE 134 (328)
T ss_dssp EETTTCCEEEEEEC------CSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTE--------EEEEEECTTCCTTTCBCC
T ss_pred EECcccEEEEEcCC------CCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCe--------EEEEEEcCCccccCCCcc
Confidence 34455666666643 3668999999999877877689999999987752 111222112 455
Q ss_pred EEEEecCCCCEEEEEe-CCCcEEEEECCCCcEEEEE------EEEeecCCceEEEecCc
Q 004998 661 SICWNSYIKSQIASSN-FEGVVQVGQVLHLIYFSAL------YCIVLNKLLIIFRYGMF 712 (720)
Q Consensus 661 ~v~~~~~~~~~laS~s-~D~~v~lWDv~tg~~~~~v------~~v~~~~~~~~~~~~~~ 712 (720)
.+++. ++.++++.. .+++|.+||..+++.+.++ ..+++++.+.++...+-
T Consensus 135 ~i~~~--~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~p~~i~~~~dG~l~v~~~~ 191 (328)
T 3dsm_A 135 QMVQY--GKYVYVNCWSYQNRILKIDTETDKVVDELTIGIQPTSLVMDKYNKMWTITDG 191 (328)
T ss_dssp CEEEE--TTEEEEEECTTCCEEEEEETTTTEEEEEEECSSCBCCCEECTTSEEEEEBCC
T ss_pred eEEEE--CCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCCCccceEEcCCCCEEEEECC
Confidence 67772 343444433 5899999999999988773 56788888887776654
No 450
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=96.67 E-value=0.007 Score=61.94 Aligned_cols=92 Identities=12% Similarity=-0.046 Sum_probs=63.8
Q ss_pred CCCeEEEEECCCCCEEEEeeCCCcEEEeeCC-cccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCCCcEEEE
Q 004998 607 SNLVCSLSFDRDGELFAAAGVNKKIKVFECD-AIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGVVQVG 684 (720)
Q Consensus 607 ~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~-~~~~~~~~~~~~~~~~-~~~~~i~~v~~~~~~~~~laS~s~D~~v~lW 684 (720)
...++.++|+|||+++++.+.+++|.+||+. .+. .+.....+ .....+.+++|++++ ++.++. ++.|.+|
T Consensus 171 ~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~-----~~~~~~~~~~~~~~p~~i~~d~~G-~l~v~~--~~~v~~~ 242 (296)
T 3e5z_A 171 RVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGE-----TEYQGVHFTVEPGKTDGLRVDAGG-LIWASA--GDGVHVL 242 (296)
T ss_dssp CSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSC-----EEEEEEEECCSSSCCCSEEEBTTS-CEEEEE--TTEEEEE
T ss_pred CCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCc-----CcCCCeEeeCCCCCCCeEEECCCC-CEEEEc--CCeEEEE
Confidence 4668999999999988888889999999986 221 00001111 123456789999965 465555 7899999
Q ss_pred ECCCCcEEEE------EEEEee-cCCceEE
Q 004998 685 QVLHLIYFSA------LYCIVL-NKLLIIF 707 (720)
Q Consensus 685 Dv~tg~~~~~------v~~v~~-~~~~~~~ 707 (720)
|.. |+.+.. +.+++| ++.+..+
T Consensus 243 ~~~-g~~~~~~~~~~~~~~~~f~~~d~~~L 271 (296)
T 3e5z_A 243 TPD-GDELGRVLTPQTTSNLCFGGPEGRTL 271 (296)
T ss_dssp CTT-SCEEEEEECSSCCCEEEEESTTSCEE
T ss_pred CCC-CCEEEEEECCCCceeEEEECCCCCEE
Confidence 986 777665 467888 4666533
No 451
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=96.65 E-value=0.015 Score=58.16 Aligned_cols=98 Identities=7% Similarity=-0.013 Sum_probs=73.0
Q ss_pred CCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEECC
Q 004998 608 NLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQVL 687 (720)
Q Consensus 608 ~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~v~lWDv~ 687 (720)
..+.+|+++++|.++++...++.|.+||........ ....+-..+.+|++++++ .+.++...++.|.+||..
T Consensus 150 ~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~-------~~~~~~~~p~~i~~d~~g-~l~v~~~~~~~v~~~~~~ 221 (270)
T 1rwi_B 150 NDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVV-------LPFTDITAPWGIAVDEAG-TVYVTEHNTNQVVKLLAG 221 (270)
T ss_dssp CSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEE-------CCCSSCCSEEEEEECTTC-CEEEEETTTSCEEEECTT
T ss_pred CCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEe-------ecccCCCCceEEEECCCC-CEEEEECCCCcEEEEcCC
Confidence 467899999999998888888999999976541100 011122568899999965 677777778999999997
Q ss_pred CCcEEE-------EEEEEeecCCceEEEecCcc
Q 004998 688 HLIYFS-------ALYCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 688 tg~~~~-------~v~~v~~~~~~~~~~~~~~~ 713 (720)
+..... ...++++++.+.+++.+..+
T Consensus 222 ~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~ 254 (270)
T 1rwi_B 222 STTSTVLPFTGLNTPLAVAVDSDRTVYVADRGN 254 (270)
T ss_dssp CSCCEECCCCSCSCEEEEEECTTCCEEEEEGGG
T ss_pred CCcceeeccCCCCCceeEEECCCCCEEEEECCC
Confidence 654322 27899999999888887665
No 452
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=96.59 E-value=0.0084 Score=62.48 Aligned_cols=91 Identities=13% Similarity=-0.018 Sum_probs=66.2
Q ss_pred CCeEEEEECCCCCEEEEe---------eCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCC
Q 004998 608 NLVCSLSFDRDGELFAAA---------GVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFE 678 (720)
Q Consensus 608 ~~V~sv~f~~dg~~lat~---------~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D 678 (720)
..|.+++| ||+++|.. +.+..|.+||+.+.. + ..+ ..+.+++|||++ .+||.++.+
T Consensus 15 ~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~--------~-~~l---~~~~~~~~SpDg-~~la~~~~~ 79 (347)
T 2gop_A 15 AYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNA--------R-RFI---ENATMPRISPDG-KKIAFMRAN 79 (347)
T ss_dssp CEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCC--------E-EEE---ESCEEEEECTTS-SEEEEEEEE
T ss_pred EEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCc--------e-EEc---ccCCCeEECCCC-CEEEEEEec
Confidence 55788888 99987764 236789999987651 1 122 458899999975 577777654
Q ss_pred ---Cc--EEEEECCCCcEEEE-----EEEEeecCCceEEEecCcc
Q 004998 679 ---GV--VQVGQVLHLIYFSA-----LYCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 679 ---~~--v~lWDv~tg~~~~~-----v~~v~~~~~~~~~~~~~~~ 713 (720)
+. |.+||+.+|+.... +.+++|+|.+..+.+.+.+
T Consensus 80 ~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~wspdg~~l~~~~~~ 124 (347)
T 2gop_A 80 EEKKVSEIWVADLETLSSKKILEAKNIRSLEWNEDSRKLLIVGFK 124 (347)
T ss_dssp TTTTEEEEEEEETTTTEEEEEEEESEEEEEEECTTSSEEEEEEEC
T ss_pred cCCCcceEEEEECCCCceEEEEcCCCccceeECCCCCEEEEEEcc
Confidence 33 77789988876543 6789999999988887754
No 453
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=96.41 E-value=0.032 Score=57.75 Aligned_cols=98 Identities=11% Similarity=-0.008 Sum_probs=64.4
Q ss_pred CCCeEEEEECCCCCEEEEeeCC----CcEEEeeCCcccccccccccceEE-ecCCCCEEEEEEecCCCCEEEEEeC----
Q 004998 607 SNLVCSLSFDRDGELFAAAGVN----KKIKVFECDAIINENRDIHYPVVE-MASRSKLSSICWNSYIKSQIASSNF---- 677 (720)
Q Consensus 607 ~~~V~sv~f~~dg~~lat~~~d----~~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~i~~v~~~~~~~~~laS~s~---- 677 (720)
...|.+++|+|||++++++..+ +.|.+||..+.... .+.. ......+.+++|+|++ .++++...
T Consensus 86 ~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~------~~~~~~~~~~~~~~i~~d~~g-~l~v~~~~~~~~ 158 (333)
T 2dg1_A 86 KANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQ------DIIEDLSTAYCIDDMVFDSKG-GFYFTDFRGYST 158 (333)
T ss_dssp SSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCE------EEECSSSSCCCEEEEEECTTS-CEEEEECCCBTT
T ss_pred CCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEE------EEEccCccCCcccceEECCCC-CEEEEecccccc
Confidence 4679999999999998887766 79999998764210 0100 1124568999999965 56666554
Q ss_pred --CCcEEEEECCCCcEEEE------EEEEeecCCce-EEEecC
Q 004998 678 --EGVVQVGQVLHLIYFSA------LYCIVLNKLLI-IFRYGM 711 (720)
Q Consensus 678 --D~~v~lWDv~tg~~~~~------v~~v~~~~~~~-~~~~~~ 711 (720)
.+.|..||..+++.... ..+++|++.+. ++..++
T Consensus 159 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~ 201 (333)
T 2dg1_A 159 NPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTET 201 (333)
T ss_dssp BCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEG
T ss_pred CCCceEEEEeCCCCEEEEeecCCCcccceEECCCCCEEEEEeC
Confidence 24455556656554321 57889999985 444443
No 454
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=96.31 E-value=0.02 Score=58.85 Aligned_cols=94 Identities=10% Similarity=0.092 Sum_probs=66.0
Q ss_pred CCeEEEEECCCCCE-EEEeeCCCcEEEeeCC--cccccccccccceEEecC-CCCEEEEEEecCCCCEEEEEeCCCcEEE
Q 004998 608 NLVCSLSFDRDGEL-FAAAGVNKKIKVFECD--AIINENRDIHYPVVEMAS-RSKLSSICWNSYIKSQIASSNFEGVVQV 683 (720)
Q Consensus 608 ~~V~sv~f~~dg~~-lat~~~d~~i~iwd~~--~~~~~~~~~~~~~~~~~~-~~~i~~v~~~~~~~~~laS~s~D~~v~l 683 (720)
...+.++|+|||+. +++.+.+++|.+||+. ++.- .. ...+..+.. ......+++.+++ ++.++...++.|.+
T Consensus 149 ~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~--~~-~~~~~~~~~~~~~p~g~~~d~~G-~lwva~~~~~~v~~ 224 (297)
T 3g4e_A 149 DISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQI--SN-RRSVYKLEKEEQIPDGMCIDAEG-KLWVACYNGGRVIR 224 (297)
T ss_dssp SBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCE--EE-EEEEEECCGGGCEEEEEEEBTTS-CEEEEEETTTEEEE
T ss_pred ccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcc--cC-cEEEEECCCCCCCCCeeEECCCC-CEEEEEcCCCEEEE
Confidence 45689999999985 5677778999999974 2210 00 011222221 3457899999965 67677666788999
Q ss_pred EECCCCcEEEE-------EEEEeec-CCce
Q 004998 684 GQVLHLIYFSA-------LYCIVLN-KLLI 705 (720)
Q Consensus 684 WDv~tg~~~~~-------v~~v~~~-~~~~ 705 (720)
||..+|+.+.+ ++|++|. +.+.
T Consensus 225 ~d~~tG~~~~~i~~p~~~~t~~~f~g~d~~ 254 (297)
T 3g4e_A 225 LDPVTGKRLQTVKLPVDKTTSCCFGGKNYS 254 (297)
T ss_dssp ECTTTCCEEEEEECSSSBEEEEEEESGGGC
T ss_pred EcCCCceEEEEEECCCCCceEEEEeCCCCC
Confidence 99999998776 7899997 5543
No 455
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=96.27 E-value=0.016 Score=59.38 Aligned_cols=82 Identities=9% Similarity=-0.115 Sum_probs=62.7
Q ss_pred CCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCC--CCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-
Q 004998 618 DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASR--SKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA- 694 (720)
Q Consensus 618 dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~--~~i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~- 694 (720)
.|++|++++.|++|.+||.+++ ..+..+... ..+.++.+.|+ +++|+ ++++.|..||. +|+.+-+
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG--------~~~w~~~~~~~~~~~~~~~~pd-G~ilv--s~~~~V~~~d~-~G~~~W~~ 71 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTK--------EIVWEYPLEKGWECNSVAATKA-GEILF--SYSKGAKMITR-DGRELWNI 71 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTT--------EEEEEEECCTTCCCCEEEECTT-SCEEE--ECBSEEEEECT-TSCEEEEE
T ss_pred CCcEEEeeCCCCEEEEEECCCC--------eEEEEeCCCccCCCcCeEECCC-CCEEE--eCCCCEEEECC-CCCEEEEE
Confidence 4689999999999999998776 245555443 36889999996 46888 45788999999 8887665
Q ss_pred -------EEEEeecCCceEEEecC
Q 004998 695 -------LYCIVLNKLLIIFRYGM 711 (720)
Q Consensus 695 -------v~~v~~~~~~~~~~~~~ 711 (720)
+.++.+.+.+.++..++
T Consensus 72 ~~~~~~~~~~~~~~~dG~~lv~~~ 95 (276)
T 3no2_A 72 AAPAGCEMQTARILPDGNALVAWC 95 (276)
T ss_dssp ECCTTCEEEEEEECTTSCEEEEEE
T ss_pred cCCCCccccccEECCCCCEEEEec
Confidence 55677888887777654
No 456
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=96.23 E-value=0.027 Score=57.69 Aligned_cols=93 Identities=2% Similarity=-0.110 Sum_probs=69.5
Q ss_pred CCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEECC
Q 004998 608 NLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQVL 687 (720)
Q Consensus 608 ~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~v~lWDv~ 687 (720)
.....+++.+||.++++.+.+++|.+||.. + ..+..+.......++...++ +++|++++.++.|..+|..
T Consensus 125 ~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G--------~~~w~~~~~~~~~~~~~~~~-g~~~v~~~~~~~v~~~d~~ 194 (276)
T 3no2_A 125 AQFRQINKNKKGNYLVPLFATSEVREIAPN-G--------QLLNSVKLSGTPFSSAFLDN-GDCLVACGDAHCFVQLNLE 194 (276)
T ss_dssp GSCSCCEECTTSCEEEEETTTTEEEEECTT-S--------CEEEEEECSSCCCEEEECTT-SCEEEECBTTSEEEEECTT
T ss_pred ccccCceECCCCCEEEEecCCCEEEEECCC-C--------CEEEEEECCCCccceeEcCC-CCEEEEeCCCCeEEEEeCc
Confidence 345667899999999999999999999976 5 24555554456677888885 5688888888899999999
Q ss_pred CCcEEEEE-------------EEEeecCCceEEEec
Q 004998 688 HLIYFSAL-------------YCIVLNKLLIIFRYG 710 (720)
Q Consensus 688 tg~~~~~v-------------~~v~~~~~~~~~~~~ 710 (720)
||+.+-++ .++..-+.+.+++..
T Consensus 195 tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~ 230 (276)
T 3no2_A 195 SNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICN 230 (276)
T ss_dssp TCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEE
T ss_pred CCcEEEEecCCCCCCccccccccceEcCCCCEEEEe
Confidence 99986553 344555666665554
No 457
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=96.21 E-value=0.01 Score=64.12 Aligned_cols=92 Identities=16% Similarity=0.114 Sum_probs=64.1
Q ss_pred cccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEee----------CCCcEEEeeCCcccccccccccceEEec--C
Q 004998 588 SFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAG----------VNKKIKVFECDAIINENRDIHYPVVEMA--S 655 (720)
Q Consensus 588 ~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~----------~d~~i~iwd~~~~~~~~~~~~~~~~~~~--~ 655 (720)
.-.++++++++..| ... . ++|+|||+++..++ .+.+|.+||..+.. ++.++. .
T Consensus 65 D~~t~~v~~~I~vG-----~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~--------v~~~I~v~~ 129 (386)
T 3sjl_D 65 DGEAGRVIGMIDGG-----FLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLL--------PTADIELPD 129 (386)
T ss_dssp ETTTTEEEEEEEEC-----SSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCC--------EEEEEEETT
T ss_pred ECCCCeEEEEEECC-----CCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCe--------EEEEEECCC
Confidence 34578888888753 222 4 99999999765554 46889999998762 233221 1
Q ss_pred ------CCCEEEEEEecCCCCEEEEEeC--CCcEEEEECCCCcEEEEE
Q 004998 656 ------RSKLSSICWNSYIKSQIASSNF--EGVVQVGQVLHLIYFSAL 695 (720)
Q Consensus 656 ------~~~i~~v~~~~~~~~~laS~s~--D~~v~lWDv~tg~~~~~v 695 (720)
...-..+.|+|+++ +|..+.. +++|.|+|+.+++.+.+|
T Consensus 130 g~r~~~g~~P~~~a~spDGk-~lyVan~~~~~~VsVID~~t~~vv~tI 176 (386)
T 3sjl_D 130 APRFLVGTYPWMTSLTPDGK-TLLFYQFSPAPAVGVVDLEGKAFKRML 176 (386)
T ss_dssp CCCCCBSCCGGGEEECTTSS-EEEEEECSSSCEEEEEETTTTEEEEEE
T ss_pred ccccccCCCCceEEEcCCCC-EEEEEEcCCCCeEEEEECCCCcEEEEE
Confidence 11345789999765 5555543 789999999999999885
No 458
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=96.03 E-value=0.04 Score=54.91 Aligned_cols=98 Identities=9% Similarity=0.056 Sum_probs=71.7
Q ss_pred CCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEECC
Q 004998 608 NLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQVL 687 (720)
Q Consensus 608 ~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~v~lWDv~ 687 (720)
..+.+++|+++|.++++...+++|.+||..+.... .....+...+.+|+++|++ +++++...++.|.+||..
T Consensus 108 ~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~-------~~~~~~~~~p~~i~~~~~g-~l~v~~~~~~~i~~~~~~ 179 (270)
T 1rwi_B 108 NYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQT-------VLPFTGLNDPDGVAVDNSG-NVYVTDTDNNRVVKLEAE 179 (270)
T ss_dssp SSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCE-------ECCCCSCCSCCCEEECTTC-CEEEEEGGGTEEEEECTT
T ss_pred CCCcceEECCCCCEEEEECCCCEEEEEECCCceeE-------eeccccCCCceeEEEeCCC-CEEEEECCCCEEEEEecC
Confidence 56899999999999888888999999985543110 0011123457889999965 577777778999999998
Q ss_pred CCcEEEE-------EEEEeecCCceEEEecCcc
Q 004998 688 HLIYFSA-------LYCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 688 tg~~~~~-------v~~v~~~~~~~~~~~~~~~ 713 (720)
++..... ..++++++.+.+++.+..+
T Consensus 180 ~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~ 212 (270)
T 1rwi_B 180 SNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNT 212 (270)
T ss_dssp TCCEEECCCSSCCSEEEEEECTTCCEEEEETTT
T ss_pred CCceEeecccCCCCceEEEECCCCCEEEEECCC
Confidence 7765432 6889999998887776543
No 459
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=96.01 E-value=0.027 Score=58.99 Aligned_cols=91 Identities=10% Similarity=-0.020 Sum_probs=65.8
Q ss_pred CeEEEEECCCCCEEEEeeCC----------CcEEEeeCCcccccccccccceEEe--cCCCCEEEEEEecCCCCEEEEEe
Q 004998 609 LVCSLSFDRDGELFAAAGVN----------KKIKVFECDAIINENRDIHYPVVEM--ASRSKLSSICWNSYIKSQIASSN 676 (720)
Q Consensus 609 ~V~sv~f~~dg~~lat~~~d----------~~i~iwd~~~~~~~~~~~~~~~~~~--~~~~~i~~v~~~~~~~~~laS~s 676 (720)
....++|+|||++++++..+ ++|.+||..+.. .+..+ ........++|+|+++ .|..++
T Consensus 173 ~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~--------v~~~~~~~~g~~p~~la~~~d~~-~lyv~~ 243 (328)
T 3dsm_A 173 QPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFT--------VEKQFKFKLGDWPSEVQLNGTRD-TLYWIN 243 (328)
T ss_dssp CBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTE--------EEEEEECCTTCCCEEEEECTTSC-EEEEES
T ss_pred CccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCe--------EEEEEecCCCCCceeEEEecCCC-EEEEEc
Confidence 35688999999988887655 899999987651 11122 1123678999999655 666555
Q ss_pred CCCcEEEEECCCCcEEE---------EEEEEeecC-CceEEEec
Q 004998 677 FEGVVQVGQVLHLIYFS---------ALYCIVLNK-LLIIFRYG 710 (720)
Q Consensus 677 ~D~~v~lWDv~tg~~~~---------~v~~v~~~~-~~~~~~~~ 710 (720)
. +|.+||+.+++... ..++++++| .+.+++.+
T Consensus 244 ~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~ 285 (328)
T 3dsm_A 244 N--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVAD 285 (328)
T ss_dssp S--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEE
T ss_pred c--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEc
Confidence 4 89999999887531 268899998 77777776
No 460
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=95.96 E-value=0.032 Score=56.99 Aligned_cols=101 Identities=7% Similarity=-0.104 Sum_probs=67.6
Q ss_pred CCeEEEEECCCCCEEEE-------eeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCc
Q 004998 608 NLVCSLSFDRDGELFAA-------AGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGV 680 (720)
Q Consensus 608 ~~V~sv~f~~dg~~lat-------~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~ 680 (720)
....+++|+++|.++++ +..++.|.+||..+...... ..|- .......+.+++|+++.+.++++.. ++.
T Consensus 18 ~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~--~~~~-~~~~~~~~~~i~~~~~~g~l~v~~~-~~~ 93 (314)
T 1pjx_A 18 PGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVI--CKPE-VNGYGGIPAGCQCDRDANQLFVADM-RLG 93 (314)
T ss_dssp TTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEE--ECCE-ETTEECCEEEEEECSSSSEEEEEET-TTE
T ss_pred CCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEE--Eecc-cCCCCCCCceEEEecCCCcEEEEEC-CCC
Confidence 45789999999999888 77899999999765421100 0000 0001356899999996344444443 457
Q ss_pred EEEEECCCCcEEEE------------EEEEeecCCceEEEecCcc
Q 004998 681 VQVGQVLHLIYFSA------------LYCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 681 v~lWDv~tg~~~~~------------v~~v~~~~~~~~~~~~~~~ 713 (720)
|.+||.. |+.... ++++++.+.+.+...++-+
T Consensus 94 l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~ 137 (314)
T 1pjx_A 94 LLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAG 137 (314)
T ss_dssp EEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBC
T ss_pred EEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCc
Confidence 8899988 765322 5788999998888776643
No 461
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=95.91 E-value=0.052 Score=57.08 Aligned_cols=87 Identities=9% Similarity=-0.017 Sum_probs=57.1
Q ss_pred CCCCCeEEEEECCCCCEEEEeeC-----CCcEEEeeCCccc-ccccccccceEEecCCCCEEEEEEecCCCCEEEEEe--
Q 004998 605 NSSNLVCSLSFDRDGELFAAAGV-----NKKIKVFECDAII-NENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSN-- 676 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~~lat~~~-----d~~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s-- 676 (720)
++-..+.+|+|+++|.++++... +.+|.+||+.+.. ........++ ....+.+..|+++|.++...++-+
T Consensus 64 ~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~--~~~~~~~~~v~vd~~~g~~yvtd~~~ 141 (343)
T 2qe8_A 64 ITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPI--TLSNSFVNDLAVDLIHNFVYISDPAP 141 (343)
T ss_dssp CCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTT--SCTTCCCCEEEEETTTTEEEEEECCS
T ss_pred cceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhh--cccccccceEEEecCCCEEEEEcCcc
Confidence 45678999999999998766543 6899999987652 0000000000 011345789999986554555554
Q ss_pred -CCCcEEEEECCCCcEEE
Q 004998 677 -FEGVVQVGQVLHLIYFS 693 (720)
Q Consensus 677 -~D~~v~lWDv~tg~~~~ 693 (720)
.++.|.+||..+|+..+
T Consensus 142 ~~~~~i~v~d~~~g~~~r 159 (343)
T 2qe8_A 142 DDKAALIRVDLQTGLAAR 159 (343)
T ss_dssp GGGCEEEEEETTTCCEEE
T ss_pred CCCCeEEEEECCCCCEEE
Confidence 68899999998876543
No 462
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=95.85 E-value=0.033 Score=59.74 Aligned_cols=88 Identities=3% Similarity=-0.113 Sum_probs=62.0
Q ss_pred eEEEEECCCCCEEEEee----------CCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeC-C
Q 004998 610 VCSLSFDRDGELFAAAG----------VNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNF-E 678 (720)
Q Consensus 610 V~sv~f~~dg~~lat~~----------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~-D 678 (720)
..-++|+|||..+-.+. .++.|-|+|..+. ..+..+.......++.|+|+++.+|+++.+ +
T Consensus 269 ~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~--------~vv~~i~~g~~p~~i~~s~Dg~~~l~v~~~~~ 340 (373)
T 2mad_H 269 WQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVG--------QTSSQISLGHDVDAISVAQDGGPDLYALSAGT 340 (373)
T ss_pred eEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCC--------EEEEEEECCCCcCeEEECCCCCeEEEEEcCCC
Confidence 44578999998643332 2468999998776 234444444467899999987657778774 8
Q ss_pred CcEEEEECCCCcEEEEEEEEeecCCce
Q 004998 679 GVVQVGQVLHLIYFSALYCIVLNKLLI 705 (720)
Q Consensus 679 ~~v~lWDv~tg~~~~~v~~v~~~~~~~ 705 (720)
++|.|||+.|++.+.++-.+.-+|.+.
T Consensus 341 ~~V~ViD~~t~~vv~~i~~vG~~P~~~ 367 (373)
T 2mad_H 341 EVLHIYDAGAGDQDQSTVELGSGPQVL 367 (373)
T ss_pred CeEEEEECCCCCEEeeecCCCCCCcEE
Confidence 999999999999998754444445443
No 463
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=95.80 E-value=0.036 Score=63.09 Aligned_cols=86 Identities=6% Similarity=-0.095 Sum_probs=65.8
Q ss_pred ECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEECC--CCcEE
Q 004998 615 FDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQVL--HLIYF 692 (720)
Q Consensus 615 f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~v~lWDv~--tg~~~ 692 (720)
.+|++.++++...+++|.|||..+. ..+..+.....+.++.|+|++ .+|..++.|+.|.+||+. +++.+
T Consensus 163 ~d~~~~~~V~~~~~~~V~viD~~t~--------~v~~~i~~g~~p~~v~~SpDG-r~lyv~~~dg~V~viD~~~~t~~~v 233 (567)
T 1qks_A 163 WDLENLFSVTLRDAGQIALIDGSTY--------EIKTVLDTGYAVHISRLSASG-RYLFVIGRDGKVNMIDLWMKEPTTV 233 (567)
T ss_dssp CCGGGEEEEEETTTTEEEEEETTTC--------CEEEEEECSSCEEEEEECTTS-CEEEEEETTSEEEEEETTSSSCCEE
T ss_pred cCCCceEEEEeCCCCeEEEEECCCC--------eEEEEEeCCCCccceEECCCC-CEEEEEcCCCeEEEEECCCCCCcEe
Confidence 4566678899999999999998776 233444444567799999965 578888899999999996 88888
Q ss_pred EEE------EEEeec----CCceEEEe
Q 004998 693 SAL------YCIVLN----KLLIIFRY 709 (720)
Q Consensus 693 ~~v------~~v~~~----~~~~~~~~ 709 (720)
.+| ..++|+ |.+..+.-
T Consensus 234 ~~i~~G~~P~~ia~s~~~~pDGk~l~v 260 (567)
T 1qks_A 234 AEIKIGSEARSIETSKMEGWEDKYAIA 260 (567)
T ss_dssp EEEECCSEEEEEEECCSTTCTTTEEEE
T ss_pred EEEecCCCCceeEEccccCCCCCEEEE
Confidence 774 678899 57755443
No 464
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=95.68 E-value=0.082 Score=56.63 Aligned_cols=90 Identities=12% Similarity=0.015 Sum_probs=62.2
Q ss_pred cccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEee----------CCCcEEEeeCCcccccccccccceEEecC--
Q 004998 588 SFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAG----------VNKKIKVFECDAIINENRDIHYPVVEMAS-- 655 (720)
Q Consensus 588 ~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~----------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-- 655 (720)
...+++++.++..| .. ..++|+|||+++..+. .+.+|.+||..+.. ++.++..
T Consensus 53 D~~t~~~~~~i~~g-----~~--p~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~--------~~~~i~~~~ 117 (373)
T 2mad_H 53 DAGSGSILGHVNGG-----FL--PNPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFL--------PIADIELPD 117 (373)
T ss_pred ECCCCeEEEEecCC-----CC--CCeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCc--------EEEEEECCC
Confidence 34577788888753 12 2899999999877765 37889999987651 2222111
Q ss_pred ------CCCEEEEEEecCCCCEEEEEeC--CCcEEEEECCCCcEEEE
Q 004998 656 ------RSKLSSICWNSYIKSQIASSNF--EGVVQVGQVLHLIYFSA 694 (720)
Q Consensus 656 ------~~~i~~v~~~~~~~~~laS~s~--D~~v~lWDv~tg~~~~~ 694 (720)
...-..+.|+|+++ +|+.+.. +++|.++| .+++.+.+
T Consensus 118 ~~~~~~g~~p~~~~~spDG~-~l~v~n~~~~~~v~viD-~t~~~~~~ 162 (373)
T 2mad_H 118 APRFDVGPYSWMNANTPNNA-DLLFFQFAAGPAVGLVV-QGGSSDDQ 162 (373)
T ss_pred ccccccCCCccceEECCCCC-EEEEEecCCCCeEEEEE-CCCCEEeE
Confidence 12235789999765 6665553 58899999 99998877
No 465
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=95.65 E-value=0.005 Score=66.03 Aligned_cols=29 Identities=7% Similarity=0.075 Sum_probs=25.3
Q ss_pred cCceeccCCCCcEEEccCCceEEeccCcc
Q 004998 140 QGIVVHNVRPSCFVMSSFNHVSFIESASC 168 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a 168 (720)
..++|+|++|.|||++..+.+.|+||+.+
T Consensus 213 ~~l~HgDl~~~Nil~~~~~~~~viD~~~~ 241 (362)
T 3ovc_A 213 RHLVHADFGSNNVLTDNGRITAVIDWSEA 241 (362)
T ss_dssp CEEECSSCSSTTEEEETTEEEEECCCTTC
T ss_pred cEEEeCCCCCCeEEEeCCCEEEEECCccc
Confidence 35799999999999987777889999987
No 466
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=95.52 E-value=0.017 Score=58.44 Aligned_cols=94 Identities=9% Similarity=-0.050 Sum_probs=60.7
Q ss_pred ehhhhcccCC-CCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHc---
Q 004998 66 SDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ--- 140 (720)
Q Consensus 66 ~e~~~Ls~l~-HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~--- 140 (720)
+|...|..+. +--|.+++. +..++. ..|+|||+ .|.++.+..... ......+..++...|..||+.
T Consensus 68 ~E~~~l~~l~~~vPVP~v~~-~~~~~~---~~~lvme~l~G~~~~~~~~~~-----~~~~~~~~~~l~~~L~~Lh~~~~~ 138 (272)
T 4gkh_A 68 DEMVRLNWLTAFMPLPTIKH-FIRTPD---DAWLLTTAIPGKTAFQVLEEY-----PDSGENIVDALAVFLRRLHSIPVC 138 (272)
T ss_dssp HHHHHHHHHTTTSCCCCEEE-EEEETT---EEEEEEECCCSEEHHHHHHHC-----GGGHHHHHHHHHHHHHHHHTSCGG
T ss_pred HHHHHHHHhccCCCcCeEEE-EEEECC---eEEEEEEeeCCccccccccCC-----HHHHHHHHHHHHHHHHHhcCCCcc
Confidence 4555555442 111345555 333442 56999999 888887765221 122334566666666666631
Q ss_pred -------------------------------------------------------CceeccCCCCcEEEccCCceEEecc
Q 004998 141 -------------------------------------------------------GIVVHNVRPSCFVMSSFNHVSFIES 165 (720)
Q Consensus 141 -------------------------------------------------------gIvHrDLKP~NILl~~~~~vkliDf 165 (720)
.++|+|+.|.|||++..+.+-|+||
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDw 218 (272)
T 4gkh_A 139 NCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDV 218 (272)
T ss_dssp GCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCC
T ss_pred cCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEEC
Confidence 2789999999999987766779999
Q ss_pred Ccc
Q 004998 166 ASC 168 (720)
Q Consensus 166 g~a 168 (720)
+.+
T Consensus 219 e~a 221 (272)
T 4gkh_A 219 GRV 221 (272)
T ss_dssp TTC
T ss_pred ccc
Confidence 887
No 467
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=95.48 E-value=0.0081 Score=63.77 Aligned_cols=30 Identities=10% Similarity=0.180 Sum_probs=25.1
Q ss_pred cCceeccCCCCcEEEccCCceEEeccCccc
Q 004998 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCS 169 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~ 169 (720)
..++|+|++|.|||++..+.+.|+||+.+.
T Consensus 222 ~~l~HgDl~~~Nil~~~~~~~~vIDwe~a~ 251 (357)
T 3ats_A 222 PVLLWGDARVGNVLYRDFQPVAVLDWEMVA 251 (357)
T ss_dssp CEEECSSCSGGGEEEETTEEEEECCGGGCE
T ss_pred ceEEeCCCCCCeEEEeCCcEEEEEcccccc
Confidence 468999999999999864457899998873
No 468
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=95.46 E-value=0.12 Score=56.01 Aligned_cols=93 Identities=9% Similarity=0.009 Sum_probs=65.6
Q ss_pred CCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCC--cEEEEE
Q 004998 608 NLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEG--VVQVGQ 685 (720)
Q Consensus 608 ~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~--~v~lWD 685 (720)
+....|+|+++|.++++...+++|++||..+.. ............ ++|+|++ +.|+.++.++ .|.+||
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~--------~~~~~~~~~~~~-ia~~~~g-~~l~~~d~~~~~~I~~~d 200 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNK--------VTTVHPGFKGGK-PAVTKDK-QRVYSIGWEGTHTVYVYM 200 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTE--------EEEEEETCCBCB-CEECTTS-SEEEEEBSSTTCEEEEEE
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCE--------EEEeeccCCCCc-eeEecCC-CcEEEEecCCCceEEEEE
Confidence 468899999999999998889999999987541 111111122233 9999964 5888888876 788888
Q ss_pred CCCCcEEEE-----------EEEEeecC-CceEEEec
Q 004998 686 VLHLIYFSA-----------LYCIVLNK-LLIIFRYG 710 (720)
Q Consensus 686 v~tg~~~~~-----------v~~v~~~~-~~~~~~~~ 710 (720)
..++..... .+++++++ .+.++...
T Consensus 201 ~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d 237 (409)
T 3hrp_A 201 KASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVD 237 (409)
T ss_dssp GGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEEC
T ss_pred cCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEE
Confidence 876654322 46888988 66666643
No 469
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=95.46 E-value=0.26 Score=49.39 Aligned_cols=97 Identities=12% Similarity=-0.023 Sum_probs=69.2
Q ss_pred CCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCCCcEEEE
Q 004998 606 SSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGVVQVG 684 (720)
Q Consensus 606 ~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~v~~~~~~~~~laS~s~D~~v~lW 684 (720)
+.+.+.+|+++++|.++++...++.|.+||.. ... ..... .....+.+|++++++ .+.++...++.|..|
T Consensus 13 ~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~-------~~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~ 83 (299)
T 2z2n_A 13 QDTGPYGITVSDKGKVWITQHKANMISCINLD-GKI-------TEYPLPTPDAKVMCLTISSDG-EVWFTENAANKIGRI 83 (299)
T ss_dssp SSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCE-------EEEECSSTTCCEEEEEECTTS-CEEEEETTTTEEEEE
T ss_pred cCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCe-------EEecCCcccCceeeEEECCCC-CEEEeCCCCCeEEEE
Confidence 35789999999999998887778999999976 310 00011 124578999999864 577776668899999
Q ss_pred ECCCCcEEE--------EEEEEeecCCceEEEecCc
Q 004998 685 QVLHLIYFS--------ALYCIVLNKLLIIFRYGMF 712 (720)
Q Consensus 685 Dv~tg~~~~--------~v~~v~~~~~~~~~~~~~~ 712 (720)
|.. |+... .+.++++.+.+.+...+..
T Consensus 84 ~~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~ 118 (299)
T 2z2n_A 84 TKK-GIIKEYTLPNPDSAPYGITEGPNGDIWFTEMN 118 (299)
T ss_dssp CTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETT
T ss_pred CCC-CcEEEEeCCCcCCCceeeEECCCCCEEEEecC
Confidence 986 44211 1678889888887776543
No 470
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=95.35 E-value=0.037 Score=59.38 Aligned_cols=75 Identities=5% Similarity=-0.128 Sum_probs=53.3
Q ss_pred EEECCCCCEEE-Eee---C-----CCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEe-CCCcEE
Q 004998 613 LSFDRDGELFA-AAG---V-----NKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSN-FEGVVQ 682 (720)
Q Consensus 613 v~f~~dg~~la-t~~---~-----d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s-~D~~v~ 682 (720)
++|+|||+.+- +.. . +..+.|||+.+.. .+..+.......+++|+|+++..+++.. .+++|.
T Consensus 269 v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~--------vv~~i~vg~~p~gi~~s~Dg~~l~va~~~~~~~Vs 340 (368)
T 1mda_H 269 VAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQ--------TSGPISNGHDSDAIIAAQDGASDNYANSAGTEVLD 340 (368)
T ss_dssp EEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCC--------EEECCEEEEEECEEEECCSSSCEEEEEETTTTEEE
T ss_pred eEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCe--------EEEEEECCCCcceEEECCCCCEEEEEccCCCCeEE
Confidence 68999998643 322 1 2345599988762 1222221224789999998777788888 599999
Q ss_pred EEECCCCcEEEEE
Q 004998 683 VGQVLHLIYFSAL 695 (720)
Q Consensus 683 lWDv~tg~~~~~v 695 (720)
|||+.|++.+.+|
T Consensus 341 VID~~t~kvv~~I 353 (368)
T 1mda_H 341 IYDAASDQDQSSV 353 (368)
T ss_dssp EEESSSCEEEEEC
T ss_pred EEECCCCcEEEEE
Confidence 9999999999884
No 471
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=95.24 E-value=0.33 Score=48.56 Aligned_cols=96 Identities=14% Similarity=-0.030 Sum_probs=69.8
Q ss_pred CCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCEEEEEEecCCCCEEEEEeCCCcEEEEE
Q 004998 607 SNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFEGVVQVGQ 685 (720)
Q Consensus 607 ~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~v~~~~~~~~~laS~s~D~~v~lWD 685 (720)
...+.+|+++++|.++++...++.|.+||..... ....+. ....+.++++.|++ .+.++...++.|.+||
T Consensus 56 ~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~--------~~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~d 126 (299)
T 2z2n_A 56 DAKVMCLTISSDGEVWFTENAANKIGRITKKGII--------KEYTLPNPDSAPYGITEGPNG-DIWFTEMNGNRIGRIT 126 (299)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTTSCE--------EEEECSSTTCCEEEEEECTTS-CEEEEETTTTEEEEEC
T ss_pred cCceeeEEECCCCCEEEeCCCCCeEEEECCCCcE--------EEEeCCCcCCCceeeEECCCC-CEEEEecCCceEEEEC
Confidence 4679999999999998888778999999965211 011111 24568999999854 5777777788999999
Q ss_pred CCCCcEEEE--------EEEEeecCCceEEEecCc
Q 004998 686 VLHLIYFSA--------LYCIVLNKLLIIFRYGMF 712 (720)
Q Consensus 686 v~tg~~~~~--------v~~v~~~~~~~~~~~~~~ 712 (720)
. +|+.... +.++++.+.+.++..+..
T Consensus 127 ~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~ 160 (299)
T 2z2n_A 127 D-DGKIREYELPNKGSYPSFITLGSDNALWFTENQ 160 (299)
T ss_dssp T-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETT
T ss_pred C-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCC
Confidence 9 6654432 678888888877776543
No 472
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=95.13 E-value=0.24 Score=50.62 Aligned_cols=93 Identities=11% Similarity=-0.085 Sum_probs=67.7
Q ss_pred CCCeEEEEECCC-CCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEE
Q 004998 607 SNLVCSLSFDRD-GELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQ 685 (720)
Q Consensus 607 ~~~V~sv~f~~d-g~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~v~lWD 685 (720)
...-.+..|+++ +.++.+...+++|..||..+.. +........+.+++|+|++. ++++. ++.|.+||
T Consensus 12 ~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~---------~~~~~~~~~~~~i~~~~dG~-l~v~~--~~~l~~~d 79 (297)
T 3g4e_A 12 CRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQ---------VQRVTMDAPVSSVALRQSGG-YVATI--GTKFCALN 79 (297)
T ss_dssp CSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCC---------EEEEECSSCEEEEEEBTTSS-EEEEE--TTEEEEEE
T ss_pred CccccCCeEECCCCEEEEEECCCCEEEEEECCCCc---------EEEEeCCCceEEEEECCCCC-EEEEE--CCeEEEEE
Confidence 356678999995 5577888889999999987652 11222346799999999754 66554 57899999
Q ss_pred CCCCcEEE-----------EEEEEeecCCceEEEecC
Q 004998 686 VLHLIYFS-----------ALYCIVLNKLLIIFRYGM 711 (720)
Q Consensus 686 v~tg~~~~-----------~v~~v~~~~~~~~~~~~~ 711 (720)
..+|+... .++.+++.+.+.+....+
T Consensus 80 ~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~ 116 (297)
T 3g4e_A 80 WKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTM 116 (297)
T ss_dssp TTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEE
T ss_pred CCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecC
Confidence 99886432 167789999998777654
No 473
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=95.13 E-value=0.12 Score=59.87 Aligned_cols=96 Identities=5% Similarity=-0.176 Sum_probs=61.0
Q ss_pred CCCCeEEEEECCCCCEEEEeeCCC----cEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeC---C
Q 004998 606 SSNLVCSLSFDRDGELFAAAGVNK----KIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNF---E 678 (720)
Q Consensus 606 ~~~~V~sv~f~~dg~~lat~~~d~----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~---D 678 (720)
+...+.+++|+|||++||.++.++ .|.+||..+. .+.....+...+....| ++++ ++++++. +
T Consensus 225 ~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~--------~~~~l~~~~~~~~~~~~-~~g~-l~~~s~~~~~~ 294 (695)
T 2bkl_A 225 DPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEK--------DFRLLVKGVGAKYEVHA-WKDR-FYVLTDEGAPR 294 (695)
T ss_dssp CTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCS--------SCEEEEECSSCCEEEEE-ETTE-EEEEECTTCTT
T ss_pred CCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCC--------ceEEeecCCCceEEEEe-cCCc-EEEEECCCCCC
Confidence 456899999999999988887776 5666654322 12222233445566667 5566 7777663 5
Q ss_pred CcEEEEECCCCcE-----EE------EEEEEeecCCceEEEecCc
Q 004998 679 GVVQVGQVLHLIY-----FS------ALYCIVLNKLLIIFRYGMF 712 (720)
Q Consensus 679 ~~v~lWDv~tg~~-----~~------~v~~v~~~~~~~~~~~~~~ 712 (720)
+.|.+||+.+++. +. .+..++|+ .+.++.+.+-
T Consensus 295 ~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~ 338 (695)
T 2bkl_A 295 QRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLK 338 (695)
T ss_dssp CEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEE
T ss_pred CEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEE
Confidence 8999999988752 21 15667776 4444544443
No 474
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=95.07 E-value=0.1 Score=53.08 Aligned_cols=74 Identities=19% Similarity=0.165 Sum_probs=54.7
Q ss_pred CCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCEEEEEEecCCCCEEEEEeCCCcEEEEEC
Q 004998 608 NLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFEGVVQVGQV 686 (720)
Q Consensus 608 ~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~v~~~~~~~~~laS~s~D~~v~lWDv 686 (720)
..+..++++++|.++++...++.|.+||..+.. .+..+. +...+.+++|+|++..+.+++..++.|..||+
T Consensus 226 ~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~--------~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~ 297 (314)
T 1pjx_A 226 GGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQ--------PKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEW 297 (314)
T ss_dssp CEEEEEEEBTTCCEEEEEETTTEEEEECTTCBS--------CSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEEC
T ss_pred CCCCceEECCCCCEEEEEcCCCEEEEEcCCCCc--------EeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeC
Confidence 567899999999999888889999999976441 111222 23578999999865435556666789999998
Q ss_pred CCC
Q 004998 687 LHL 689 (720)
Q Consensus 687 ~tg 689 (720)
.+.
T Consensus 298 ~~~ 300 (314)
T 1pjx_A 298 QRN 300 (314)
T ss_dssp SSC
T ss_pred CCC
Confidence 753
No 475
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=95.02 E-value=0.13 Score=59.87 Aligned_cols=106 Identities=6% Similarity=-0.123 Sum_probs=63.8
Q ss_pred CCCCeEEEEECCCCCEEEEeeC-----CCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCC-
Q 004998 606 SSNLVCSLSFDRDGELFAAAGV-----NKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFE- 678 (720)
Q Consensus 606 ~~~~V~sv~f~~dg~~lat~~~-----d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~v~~~~~~~~~laS~s~D- 678 (720)
|...+.+++|+|||++|+.++. +..|.+||+.+..... ....++..+ .+...+.. .|+|+++.++.++..+
T Consensus 231 ~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~-~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~ 308 (710)
T 2xdw_A 231 EPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGI-TGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHS 308 (710)
T ss_dssp CTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSS-CSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTC
T ss_pred CCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECccccccc-CCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCC
Confidence 4567889999999999887765 6789999986510000 000012222 23334444 5888665444444433
Q ss_pred --CcEEEEECCCCc-----EEE------EEEEEeecCCceEEEecCcc
Q 004998 679 --GVVQVGQVLHLI-----YFS------ALYCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 679 --~~v~lWDv~tg~-----~~~------~v~~v~~~~~~~~~~~~~~~ 713 (720)
+.|.+||+.+++ .+. .+.+++|++.+.++.+.+-|
T Consensus 309 ~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~ 356 (710)
T 2xdw_A 309 PNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHD 356 (710)
T ss_dssp TTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEET
T ss_pred CCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEEC
Confidence 369999998873 222 26678888666665555433
No 476
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=94.89 E-value=0.19 Score=52.24 Aligned_cols=92 Identities=10% Similarity=-0.121 Sum_probs=65.1
Q ss_pred CCeEEEEECCCC-CEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEEC
Q 004998 608 NLVCSLSFDRDG-ELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQV 686 (720)
Q Consensus 608 ~~V~sv~f~~dg-~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~v~lWDv 686 (720)
....+.+|+|++ .++.++..++.|.+||..+.. +........+.+++|+|++ .+++++ .+ .|.+||.
T Consensus 49 ~~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~---------~~~~~~~~~v~~i~~~~dg-~l~v~~-~~-gl~~~d~ 116 (326)
T 2ghs_A 49 LLGEGPTFDPASGTAWWFNILERELHELHLASGR---------KTVHALPFMGSALAKISDS-KQLIAS-DD-GLFLRDT 116 (326)
T ss_dssp SBEEEEEEETTTTEEEEEEGGGTEEEEEETTTTE---------EEEEECSSCEEEEEEEETT-EEEEEE-TT-EEEEEET
T ss_pred CCCcCCeEeCCCCEEEEEECCCCEEEEEECCCCc---------EEEEECCCcceEEEEeCCC-eEEEEE-CC-CEEEEEC
Confidence 346788999985 567777788999999987641 1112224579999999964 466554 34 4999999
Q ss_pred CCCcEEE-----------EEEEEeecCCceEEEecC
Q 004998 687 LHLIYFS-----------ALYCIVLNKLLIIFRYGM 711 (720)
Q Consensus 687 ~tg~~~~-----------~v~~v~~~~~~~~~~~~~ 711 (720)
.+|+... .++++++++.+.+...++
T Consensus 117 ~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~ 152 (326)
T 2ghs_A 117 ATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTM 152 (326)
T ss_dssp TTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEE
T ss_pred CCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeC
Confidence 8887432 267889999988776543
No 477
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=94.50 E-value=0.3 Score=49.75 Aligned_cols=92 Identities=7% Similarity=0.024 Sum_probs=62.7
Q ss_pred cceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeC--CCcEEEeeCCcccccccccccceEEe--cCCCCEEEEEEe
Q 004998 590 SKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGV--NKKIKVFECDAIINENRDIHYPVVEM--ASRSKLSSICWN 665 (720)
Q Consensus 590 ~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~--d~~i~iwd~~~~~~~~~~~~~~~~~~--~~~~~i~~v~~~ 665 (720)
.+.++++++.|+ .......++|++||.++++.|. +.+|+++|+.++. .+..+ ..+...-.+++.
T Consensus 7 ~~~~vv~~~p~~----~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~--------v~~~i~l~~~~fgeGi~~~ 74 (266)
T 2iwa_A 7 YIVEVLNEFPHD----PYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGK--------VENIHKMDDSYFGEGLTLL 74 (266)
T ss_dssp EEEEEEEEEECC----TTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCC--------EEEEEECCTTCCEEEEEEE
T ss_pred cCceEEEEEECC----CCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCC--------EEEEEecCCCcceEEEEEe
Confidence 357899999873 1245789999999988777765 6899999998762 12221 122223355665
Q ss_pred cCCCCEEEEEeCCCcEEEEECCCCcEEEEE
Q 004998 666 SYIKSQIASSNFEGVVQVGQVLHLIYFSAL 695 (720)
Q Consensus 666 ~~~~~~laS~s~D~~v~lWDv~tg~~~~~v 695 (720)
. +.+.++.-.+++|-++|..|++.+.++
T Consensus 75 g--~~lyv~t~~~~~v~viD~~t~~v~~~i 102 (266)
T 2iwa_A 75 N--EKLYQVVWLKNIGFIYDRRTLSNIKNF 102 (266)
T ss_dssp T--TEEEEEETTCSEEEEEETTTTEEEEEE
T ss_pred C--CEEEEEEecCCEEEEEECCCCcEEEEE
Confidence 3 333344446899999999999988875
No 478
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=94.47 E-value=0.45 Score=49.39 Aligned_cols=94 Identities=10% Similarity=-0.008 Sum_probs=62.0
Q ss_pred CCeEEEEECCCCCEE-EEeeCCCcEEEeeCC--cccccccccccceEEec-CCCCEEEEEEecCCCCEEEEEeCCCcEEE
Q 004998 608 NLVCSLSFDRDGELF-AAAGVNKKIKVFECD--AIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFEGVVQV 683 (720)
Q Consensus 608 ~~V~sv~f~~dg~~l-at~~~d~~i~iwd~~--~~~~~~~~~~~~~~~~~-~~~~i~~v~~~~~~~~~laS~s~D~~v~l 683 (720)
...+.++|+|||+.+ ++.+.++.|.+||+. ++.. ... ...+..+. .......+++.+++ ++.++...++.|.+
T Consensus 179 ~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~-~~~-~~~~~~~~~~~~~p~gi~~d~~G-~lwva~~~~~~v~~ 255 (326)
T 2ghs_A 179 SIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLP-TGK-AEVFIDSTGIKGGMDGSVCDAEG-HIWNARWGEGAVDR 255 (326)
T ss_dssp SSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCB-SSC-CEEEEECTTSSSEEEEEEECTTS-CEEEEEETTTEEEE
T ss_pred cccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCc-ccC-ceEEEECCCCCCCCCeeEECCCC-CEEEEEeCCCEEEE
Confidence 457899999999865 555667899999975 3200 000 01112222 13456789999865 56666655688999
Q ss_pred EECCCCcEEEE-------EEEEeec-CCce
Q 004998 684 GQVLHLIYFSA-------LYCIVLN-KLLI 705 (720)
Q Consensus 684 WDv~tg~~~~~-------v~~v~~~-~~~~ 705 (720)
||. +|+.+.+ +++++|+ +.+.
T Consensus 256 ~d~-~g~~~~~i~~~~~~~~~~af~g~d~~ 284 (326)
T 2ghs_A 256 YDT-DGNHIARYEVPGKQTTCPAFIGPDAS 284 (326)
T ss_dssp ECT-TCCEEEEEECSCSBEEEEEEESTTSC
T ss_pred ECC-CCCEEEEEECCCCCcEEEEEecCCCC
Confidence 999 6776654 7899997 6653
No 479
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=94.41 E-value=0.11 Score=56.68 Aligned_cols=93 Identities=17% Similarity=0.110 Sum_probs=64.7
Q ss_pred cccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEee----------CCCcEEEeeCCcccccccccccceEEecC--
Q 004998 588 SFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAG----------VNKKIKVFECDAIINENRDIHYPVVEMAS-- 655 (720)
Q Consensus 588 ~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~----------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-- 655 (720)
.-.++++++++.-|. .. .++|+|||+++..+. .+++|.++|..+.. .+..+.-
T Consensus 105 D~~t~~vv~~I~vG~-----~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~--------vv~~I~v~g 169 (426)
T 3c75_H 105 DGSTGRILGMTDGGF-----LP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFL--------PIADIELPD 169 (426)
T ss_dssp ETTTTEEEEEEEECS-----SC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCC--------EEEEEEETT
T ss_pred ECCCCEEEEEEECCC-----CC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCc--------EEEEEECCC
Confidence 346788899988542 23 799999999765554 47799999988762 2222210
Q ss_pred ------CCCEEEEEEecCCCCEEEEEeC--CCcEEEEECCCCcEEEEEE
Q 004998 656 ------RSKLSSICWNSYIKSQIASSNF--EGVVQVGQVLHLIYFSALY 696 (720)
Q Consensus 656 ------~~~i~~v~~~~~~~~~laS~s~--D~~v~lWDv~tg~~~~~v~ 696 (720)
...-..+.|+|+++ +|..+.. +++|.|.|+.+++.+.+|.
T Consensus 170 ~~r~~~g~~P~~~~~spDGk-~lyV~n~~~~~~VsVID~~t~kvv~~I~ 217 (426)
T 3c75_H 170 APRFLVGTYQWMNALTPDNK-NLLFYQFSPAPAVGVVDLEGKTFDRMLD 217 (426)
T ss_dssp CCCCCBSCCGGGSEECTTSS-EEEEEECSSSCEEEEEETTTTEEEEEEE
T ss_pred ccccccCCCcceEEEcCCCC-EEEEEecCCCCeEEEEECCCCeEEEEEE
Confidence 11234679999765 5655553 6899999999999988743
No 480
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=94.25 E-value=0.36 Score=49.37 Aligned_cols=92 Identities=5% Similarity=-0.071 Sum_probs=66.2
Q ss_pred CCCeEEEEECCCCC-EEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEE
Q 004998 607 SNLVCSLSFDRDGE-LFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQ 685 (720)
Q Consensus 607 ~~~V~sv~f~~dg~-~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~v~lWD 685 (720)
..+..+..|+|||+ ++.++..++.|..||..... .........+..++|++++ .++++...++.|.+||
T Consensus 44 ~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~g~~---------~~~~~~~~~~~gl~~d~dG-~l~v~~~~~~~v~~~~ 113 (305)
T 3dr2_A 44 ATWSEGPAWWEAQRTLVWSDLVGRRVLGWREDGTV---------DVLLDATAFTNGNAVDAQQ-RLVHCEHGRRAITRSD 113 (305)
T ss_dssp CSSEEEEEEEGGGTEEEEEETTTTEEEEEETTSCE---------EEEEESCSCEEEEEECTTS-CEEEEETTTTEEEEEC
T ss_pred CcCccCCeEeCCCCEEEEEECCCCEEEEEeCCCCE---------EEEeCCCCccceeeECCCC-CEEEEECCCCEEEEEC
Confidence 56788999999998 67888888999999863211 1111234568999999965 4666655568899999
Q ss_pred CCCCcEEEE-----------EEEEeecCCceEEEe
Q 004998 686 VLHLIYFSA-----------LYCIVLNKLLIIFRY 709 (720)
Q Consensus 686 v~tg~~~~~-----------v~~v~~~~~~~~~~~ 709 (720)
.. |+...- ++.+++.+.+.+..+
T Consensus 114 ~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~t 147 (305)
T 3dr2_A 114 AD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFT 147 (305)
T ss_dssp TT-SCEEEEECEETTEECSCCCCEEECTTSCEEEE
T ss_pred CC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEe
Confidence 86 653221 346899999998886
No 481
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=94.20 E-value=0.88 Score=45.35 Aligned_cols=96 Identities=11% Similarity=-0.037 Sum_probs=69.3
Q ss_pred CCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCEEEEEEecCCCCEEEEEeCCCcEEEEE
Q 004998 607 SNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFEGVVQVGQ 685 (720)
Q Consensus 607 ~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~v~~~~~~~~~laS~s~D~~v~lWD 685 (720)
...+.+|+++++|.++++...++.|.+||.. ..-. ...+. ....+.++++.+++ ++.++...++.|.+||
T Consensus 19 ~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~-------~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~v~~~d 89 (300)
T 2qc5_A 19 DSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIK-------EFEVPTPDAKVMCLIVSSLG-DIWFTENGANKIGKLS 89 (300)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEE-------EEECSSTTCCEEEEEECTTS-CEEEEETTTTEEEEEC
T ss_pred CCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceE-------EEECCCCCCcceeEEECCCC-CEEEEecCCCeEEEEC
Confidence 4678999999999998888788999999976 2100 01111 23568999999854 5666666678999999
Q ss_pred CCCCcEEEE--------EEEEeecCCceEEEecCc
Q 004998 686 VLHLIYFSA--------LYCIVLNKLLIIFRYGMF 712 (720)
Q Consensus 686 v~tg~~~~~--------v~~v~~~~~~~~~~~~~~ 712 (720)
.. |+.... +.++++.+.+.++..+..
T Consensus 90 ~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~ 123 (300)
T 2qc5_A 90 KK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLN 123 (300)
T ss_dssp TT-SCEEEEECSSTTCCEEEEEECSTTCEEEEETT
T ss_pred CC-CCeEEecCCCCCCCCccceECCCCCEEEEccC
Confidence 88 654321 678888888887776653
No 482
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=94.18 E-value=0.21 Score=52.35 Aligned_cols=102 Identities=7% Similarity=0.003 Sum_probs=63.5
Q ss_pred CeEEEEECCCCCEEEEeeCCC-cEEEeeCCcccccc---cccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEE
Q 004998 609 LVCSLSFDRDGELFAAAGVNK-KIKVFECDAIINEN---RDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVG 684 (720)
Q Consensus 609 ~V~sv~f~~dg~~lat~~~d~-~i~iwd~~~~~~~~---~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~v~lW 684 (720)
.++.|+|+|||++|..+..++ +|..+|........ ......+....+......++++++ +++.++...++.|.+|
T Consensus 196 ~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~-G~l~va~~~~~~V~~~ 274 (343)
T 2qe8_A 196 GVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKD-HNIYVGDLAHSAIGVI 274 (343)
T ss_dssp CEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTT-CCEEEEEGGGTEEEEE
T ss_pred ccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCC-CCEEEEccCCCeEEEE
Confidence 478999999999877776665 44444422111100 000011122222334567899996 5677787778999999
Q ss_pred ECCCCcEEEE--------EEEEeecCCceEEEecC
Q 004998 685 QVLHLIYFSA--------LYCIVLNKLLIIFRYGM 711 (720)
Q Consensus 685 Dv~tg~~~~~--------v~~v~~~~~~~~~~~~~ 711 (720)
|..+|+.... ..+|+|.+.+.+++..+
T Consensus 275 d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~ 309 (343)
T 2qe8_A 275 TSADRAYKLLVTDEKLSWTDSFNFGSDGYLYFDCN 309 (343)
T ss_dssp ETTTTEEEEEEECGGGSCEEEEEECTTSCEEEEEC
T ss_pred ECCCCCEEEEEECCceecCCeeEECCCCcEEEEeC
Confidence 9967763221 56889988887776654
No 483
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=94.10 E-value=0.056 Score=56.42 Aligned_cols=29 Identities=3% Similarity=0.102 Sum_probs=26.9
Q ss_pred cCceeccCCCCcEEEccCCceEEeccCcc
Q 004998 140 QGIVVHNVRPSCFVMSSFNHVSFIESASC 168 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a 168 (720)
.+++|+|++|.|||++.++.+.++||+.+
T Consensus 222 ~~l~HgD~~~~Nil~~~~~~~~lIDfe~a 250 (346)
T 2q83_A 222 PNLCHQDYGTGNTLLGENEQIWVIDLDTV 250 (346)
T ss_dssp CCEECSSCSTTSEEECGGGCEEECCCTTC
T ss_pred CceecCCCCcccEEEeCCCcEEEEehhhc
Confidence 68999999999999988889999999977
No 484
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=93.96 E-value=0.72 Score=46.65 Aligned_cols=91 Identities=9% Similarity=0.148 Sum_probs=58.4
Q ss_pred cceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCC--cEEEeeCCcccccccccccceEEecCCCCE--EEEEEe
Q 004998 590 SKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNK--KIKVFECDAIINENRDIHYPVVEMASRSKL--SSICWN 665 (720)
Q Consensus 590 ~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i--~~v~~~ 665 (720)
...+++++..| +.......+.|+ |+.++.++|.++ +|+++|++++. .+....-.... -.+...
T Consensus 29 ~~~~vv~~~ph----d~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgk--------v~~~~~l~~~~FgeGit~~ 95 (262)
T 3nol_A 29 YDYQIVHSYPH----DTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGK--------TLQQIELGKRYFGEGISDW 95 (262)
T ss_dssp EEEEEEEEEEC----CTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCC--------EEEEEECCTTCCEEEEEEE
T ss_pred cceEEEEEecC----CCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCc--------EEEEEecCCccceeEEEEe
Confidence 35688888876 234667889999 788888888876 99999998862 11111111122 223333
Q ss_pred cCCCCEEEEEeCCCcEEEEECCCCcEEEEE
Q 004998 666 SYIKSQIASSNFEGVVQVGQVLHLIYFSAL 695 (720)
Q Consensus 666 ~~~~~~laS~s~D~~v~lWDv~tg~~~~~v 695 (720)
+..+....-.++++-++|..|++.+.++
T Consensus 96 --g~~ly~ltw~~~~v~v~D~~t~~~~~ti 123 (262)
T 3nol_A 96 --KDKIVGLTWKNGLGFVWNIRNLRQVRSF 123 (262)
T ss_dssp --TTEEEEEESSSSEEEEEETTTCCEEEEE
T ss_pred --CCEEEEEEeeCCEEEEEECccCcEEEEE
Confidence 2223333334788888888888888774
No 485
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=93.79 E-value=0.09 Score=57.45 Aligned_cols=84 Identities=5% Similarity=0.033 Sum_probs=58.7
Q ss_pred EEEECCCCCE-EEEee---------CCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeC-CCc
Q 004998 612 SLSFDRDGEL-FAAAG---------VNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNF-EGV 680 (720)
Q Consensus 612 sv~f~~dg~~-lat~~---------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~-D~~ 680 (720)
.++|+|||.. +++.+ .+++|-|+|..+.. .+..+.-...-..|.|+|+++.+|+++.+ +++
T Consensus 323 ~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~k--------vv~~I~vg~~P~gia~spDg~~~lyv~n~~s~~ 394 (426)
T 3c75_H 323 QTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGE--------RINKIELGHEIDSINVSQDAEPLLYALSAGTQT 394 (426)
T ss_dssp CEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCC--------EEEEEEEEEEECEEEECCSSSCEEEEEETTTTE
T ss_pred eeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCe--------EEEEEECCCCcCeEEEccCCCEEEEEEcCCCCe
Confidence 3689999875 44432 24589999988762 23333222347899999976547888884 999
Q ss_pred EEEEECCCCcEEEEEEEEeecCC
Q 004998 681 VQVGQVLHLIYFSALYCIVLNKL 703 (720)
Q Consensus 681 v~lWDv~tg~~~~~v~~v~~~~~ 703 (720)
|.|+|+.|++.+.+|-.+.-.|.
T Consensus 395 VsVID~~t~kvv~tI~~vG~~P~ 417 (426)
T 3c75_H 395 LHIYDAATGEELRSVDQLGRGPQ 417 (426)
T ss_dssp EEEEETTTCCEEEEECCCSSSCC
T ss_pred EEEEECCCCCEEEEecCCCCCCc
Confidence 99999999999988633444444
No 486
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=93.51 E-value=0.15 Score=59.93 Aligned_cols=93 Identities=12% Similarity=-0.047 Sum_probs=60.7
Q ss_pred CeEEEEEC-CCCCEEEEeeC-----CCcEEEeeCCcc-cccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCC---
Q 004998 609 LVCSLSFD-RDGELFAAAGV-----NKKIKVFECDAI-INENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFE--- 678 (720)
Q Consensus 609 ~V~sv~f~-~dg~~lat~~~-----d~~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D--- 678 (720)
.+.+.+|| |||++||-+.. ..+|+|+|+.++ .. +...+.. ....++|+|+++ .|+-+++|
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~----l~~~~~~-----~~~~~~WspDg~-~l~y~~~d~~~ 244 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQT----IADKVSG-----TNGEIVWGPDHT-SLFYVTKDETL 244 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCC----CCCCEEE-----ECSCCEECSSTT-EEEEEEECTTC
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEe----CCccccC-----ceeeEEEecCCC-EEEEEEECCCC
Confidence 57889999 99999884432 236999998776 31 0011111 135789999765 55555555
Q ss_pred --CcEEEEECCCCc----EEEE------EEEEeecCCceEEEecC
Q 004998 679 --GVVQVGQVLHLI----YFSA------LYCIVLNKLLIIFRYGM 711 (720)
Q Consensus 679 --~~v~lWDv~tg~----~~~~------v~~v~~~~~~~~~~~~~ 711 (720)
..|.+|++.+++ .+.+ ..++.|++++..+...+
T Consensus 245 ~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~ 289 (751)
T 2xe4_A 245 RENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGS 289 (751)
T ss_dssp CEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEE
T ss_pred CCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEe
Confidence 258888998874 2321 45788999997766543
No 487
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=92.88 E-value=1.6 Score=43.31 Aligned_cols=95 Identities=9% Similarity=-0.129 Sum_probs=68.5
Q ss_pred CCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCEEEEEEecCCCCEEEEEeCCCcEEEEE
Q 004998 607 SNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFEGVVQVGQ 685 (720)
Q Consensus 607 ~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~v~~~~~~~~~laS~s~D~~v~lWD 685 (720)
...+.+|+++++|.++++...++.|.+||.. ... ....+. ....+.++++.+++ .+.++...++.|..||
T Consensus 61 ~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~-------~~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~~ 131 (300)
T 2qc5_A 61 DAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGF-------TEYPLPQPDSGPYGITEGLNG-DIWFTQLNGDRIGKLT 131 (300)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE-------EEEECSSTTCCEEEEEECSTT-CEEEEETTTTEEEEEC
T ss_pred CCcceeEEECCCCCEEEEecCCCeEEEECCC-CCe-------EEecCCCCCCCCccceECCCC-CEEEEccCCCeEEEEC
Confidence 4678999999999998887778999999976 310 011111 23568999999854 5666666688999999
Q ss_pred CCCCcEEEE--------EEEEeecCCceEEEecC
Q 004998 686 VLHLIYFSA--------LYCIVLNKLLIIFRYGM 711 (720)
Q Consensus 686 v~tg~~~~~--------v~~v~~~~~~~~~~~~~ 711 (720)
.. |+.... ..++++.+.+.+++.+.
T Consensus 132 ~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~ 164 (300)
T 2qc5_A 132 AD-GTIYEYDLPNKGSYPAFITLGSDNALWFTEN 164 (300)
T ss_dssp TT-SCEEEEECSSTTCCEEEEEECTTSSEEEEET
T ss_pred CC-CCEEEccCCCCCCCceeEEECCCCCEEEEec
Confidence 87 665432 67888888887776654
No 488
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=92.78 E-value=0.14 Score=59.88 Aligned_cols=55 Identities=16% Similarity=0.028 Sum_probs=43.2
Q ss_pred CEEEEEEecCCCCEEEEEeCC-C----cEEEEECCCCcEEEE----E--EEEeecCCceEEEecCccc
Q 004998 658 KLSSICWNSYIKSQIASSNFE-G----VVQVGQVLHLIYFSA----L--YCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 658 ~i~~v~~~~~~~~~laS~s~D-~----~v~lWDv~tg~~~~~----v--~~v~~~~~~~~~~~~~~~~ 714 (720)
.+..++|||++ .+||.++.+ | +|++||+.+|+.+.. + .+++|+|+ ..+.+++.|+
T Consensus 164 ~~~~~~~SPDG-~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~~~~~~~~~~wspD-~~l~~~~~~~ 229 (741)
T 1yr2_A 164 ALDAWAASDDG-RLLAYSVQDGGSDWRTVKFVGVADGKPLADELKWVKFSGLAWLGN-DALLYSRFAE 229 (741)
T ss_dssp EEEEEEECTTS-SEEEEEEEETTCSEEEEEEEETTTCCEEEEEEEEEESCCCEESTT-SEEEEEECCC
T ss_pred EEEeEEECCCC-CEEEEEEcCCCCceEEEEEEECCCCCCCCccCCCceeccEEEECC-CEEEEEEecC
Confidence 58899999975 467665543 3 599999999987654 2 57899999 9998888765
No 489
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=92.76 E-value=0.46 Score=48.60 Aligned_cols=92 Identities=8% Similarity=0.039 Sum_probs=59.3
Q ss_pred CCeEEEEECCCCCEEEE----eeC-------------CCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCC
Q 004998 608 NLVCSLSFDRDGELFAA----AGV-------------NKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKS 670 (720)
Q Consensus 608 ~~V~sv~f~~dg~~lat----~~~-------------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~ 670 (720)
+.+++++++|||.+++| |.. .+.|..||..+.. .. .+. .-...+.++|+|+++
T Consensus 131 ~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~-----~~-~~~---~~~~p~gl~~spdg~- 200 (305)
T 3dr2_A 131 NSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSP-----LQ-RMA---DLDHPNGLAFSPDEQ- 200 (305)
T ss_dssp SCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCC-----CE-EEE---EESSEEEEEECTTSS-
T ss_pred CCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCc-----EE-EEe---cCCCCcceEEcCCCC-
Confidence 45788999999999887 432 2457777764431 00 111 223467899999754
Q ss_pred EEEEEeCC------CcEEEEECCCCcEEEE--EE---------EEeecCCceEEEec
Q 004998 671 QIASSNFE------GVVQVGQVLHLIYFSA--LY---------CIVLNKLLIIFRYG 710 (720)
Q Consensus 671 ~laS~s~D------~~v~lWDv~tg~~~~~--v~---------~v~~~~~~~~~~~~ 710 (720)
.|+.++.+ +.|.+||+..+. +.. ++ .+++.+.+++.+.+
T Consensus 201 ~lyv~~~~~~~~~~~~i~~~~~~~~~-l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~ 256 (305)
T 3dr2_A 201 TLYVSQTPEQGHGSVEITAFAWRDGA-LHDRRHFASVPDGLPDGFCVDRGGWLWSSS 256 (305)
T ss_dssp EEEEEECCC---CCCEEEEEEEETTE-EEEEEEEECCSSSCCCSEEECTTSCEEECC
T ss_pred EEEEEecCCcCCCCCEEEEEEecCCC-ccCCeEEEECCCCCCCeEEECCCCCEEEec
Confidence 56666554 789999998765 332 22 56777777766654
No 490
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=92.58 E-value=0.51 Score=50.98 Aligned_cols=94 Identities=5% Similarity=-0.073 Sum_probs=62.6
Q ss_pred EEECCCCCEEEEeeCCC--cEEEeeCCcccccccccccceEEe-c-CCCCEEEEEEecCCCCEEEEEeCCCcEEEEECCC
Q 004998 613 LSFDRDGELFAAAGVNK--KIKVFECDAIINENRDIHYPVVEM-A-SRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLH 688 (720)
Q Consensus 613 v~f~~dg~~lat~~~d~--~i~iwd~~~~~~~~~~~~~~~~~~-~-~~~~i~~v~~~~~~~~~laS~s~D~~v~lWDv~t 688 (720)
++|+|+|++|..++.++ +|.+||...... .. .+... . ......+++++|.++. |..++.++.|..||..+
T Consensus 176 ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~-~~----~~g~~~~~~~~~p~~iav~p~~g~-lyv~d~~~~I~~~d~~~ 249 (409)
T 3hrp_A 176 PAVTKDKQRVYSIGWEGTHTVYVYMKASGWA-PT----RIGQLGSTFSGKIGAVALDETEEW-LYFVDSNKNFGRFNVKT 249 (409)
T ss_dssp CEECTTSSEEEEEBSSTTCEEEEEEGGGTTC-EE----EEEECCTTSCSCCCBCEECTTSSE-EEEECTTCEEEEEETTT
T ss_pred eeEecCCCcEEEEecCCCceEEEEEcCCCce-eE----EeeeccchhcCCcEEEEEeCCCCe-EEEEECCCcEEEEECCC
Confidence 99999999888877766 788888644310 00 00011 1 2345788999996554 44477889999999988
Q ss_pred CcEEEEE-------------E-EEeecC-CceEEEecCcc
Q 004998 689 LIYFSAL-------------Y-CIVLNK-LLIIFRYGMFQ 713 (720)
Q Consensus 689 g~~~~~v-------------~-~v~~~~-~~~~~~~~~~~ 713 (720)
+... .+ + .++|++ .+.++..++..
T Consensus 250 ~~~~-~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~ 288 (409)
T 3hrp_A 250 QEVT-LIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNL 288 (409)
T ss_dssp CCEE-EEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTT
T ss_pred CCEE-EEecccccCCCCCCccccEEEeCCCCEEEEEeCCC
Confidence 7632 22 2 788998 57777766543
No 491
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=92.53 E-value=0.18 Score=58.45 Aligned_cols=58 Identities=5% Similarity=-0.086 Sum_probs=40.4
Q ss_pred CcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEEE
Q 004998 629 KKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSAL 695 (720)
Q Consensus 629 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~v 695 (720)
++|..||+.++ ..+....+...+....+... +.+|+.++.||.|++||+.||+.+.++
T Consensus 457 g~l~A~D~~tG--------~~~W~~~~~~~~~~g~~~~~-g~~v~~g~~dg~l~a~D~~tG~~lw~~ 514 (677)
T 1kb0_A 457 GRLLAWDPVAQ--------KAAWSVEHVSPWNGGTLTTA-GNVVFQGTADGRLVAYHAATGEKLWEA 514 (677)
T ss_dssp EEEEEEETTTT--------EEEEEEEESSSCCCCEEEET-TTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred cEEEEEeCCCC--------cEEeecCCCCCCcCcceEeC-CCEEEEECCCCcEEEEECCCCceeeee
Confidence 78999998776 23333333333334445553 357888899999999999999998874
No 492
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=92.45 E-value=0.083 Score=56.33 Aligned_cols=67 Identities=3% Similarity=-0.086 Sum_probs=41.5
Q ss_pred CCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE
Q 004998 618 DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA 694 (720)
Q Consensus 618 dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~ 694 (720)
++.++++|+.|+.|..||..++ ..++.... +.+.+..+..+ +.++++++.||.|..||..+|+.+..
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG--------~~~W~~~~-~~~~s~p~~~~-g~~~v~~s~dg~l~a~d~~tG~~~w~ 74 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTG--------SIKWTLKE-DPVLQVPTHVE-EPAFLPDPNDGSLYTLGSKNNEGLTK 74 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTC--------CEEEEEEC-CCSCCCC------CCEEECTTTCCEEEC-----CCSEE
T ss_pred eCCEEEEEcCCCEEEEEECCCC--------CEEEEecC-CCceecceEcC-CCEEEEeCCCCEEEEEECCCCceeee
Confidence 6788999999999999998876 23333333 34444444443 34677888999999999999987543
No 493
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=92.26 E-value=2.5 Score=42.24 Aligned_cols=90 Identities=12% Similarity=0.074 Sum_probs=55.3
Q ss_pred ceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCC--CcEEEeeCCcccccccccccceEEecCCCCE--EEEEEec
Q 004998 591 KLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVN--KKIKVFECDAIINENRDIHYPVVEMASRSKL--SSICWNS 666 (720)
Q Consensus 591 ~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d--~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i--~~v~~~~ 666 (720)
..+++++..| .....+-.+.|++ +.++.+.|.+ .+|+++|+.++. .+....-.... -.++..
T Consensus 8 ~~~v~~~~ph----d~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgk--------v~~~~~l~~~~fgeGi~~~- 73 (243)
T 3mbr_X 8 GYRVVKRYPH----DTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGR--------ILQRAEVPPPYFGAGIVAW- 73 (243)
T ss_dssp CEEEEEEEEC----CTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCC--------EEEEEECCTTCCEEEEEEE-
T ss_pred ceEEEEEcCC----CCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCC--------EEEEEeCCCCcceeEEEEe-
Confidence 4578888876 2356788999997 7788888876 499999998762 11111111111 122332
Q ss_pred CCCCEEEEEeCCCcEEEEECCCCcEEEEE
Q 004998 667 YIKSQIASSNFEGVVQVGQVLHLIYFSAL 695 (720)
Q Consensus 667 ~~~~~laS~s~D~~v~lWDv~tg~~~~~v 695 (720)
+..+....-.++++-++|..|.+.+.++
T Consensus 74 -~~~ly~ltw~~~~v~v~D~~tl~~~~ti 101 (243)
T 3mbr_X 74 -RDRLIQLTWRNHEGFVYDLATLTPRARF 101 (243)
T ss_dssp -TTEEEEEESSSSEEEEEETTTTEEEEEE
T ss_pred -CCEEEEEEeeCCEEEEEECCcCcEEEEE
Confidence 2223333335777888888887777774
No 494
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=92.14 E-value=1.9 Score=43.66 Aligned_cols=90 Identities=10% Similarity=0.114 Sum_probs=57.5
Q ss_pred ceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEE-ecCCCCEEEEEEecCCC
Q 004998 591 KLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVE-MASRSKLSSICWNSYIK 669 (720)
Q Consensus 591 ~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~i~~v~~~~~~~ 669 (720)
..+++++..| +.......|.|+ ++.++.+.|.+++|+++|++++. .+.. +...-.--.++... .
T Consensus 42 ~~~Vv~~~ph----d~~~ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgk--------v~~~~l~~~~FgeGit~~g--~ 106 (268)
T 3nok_A 42 VAHIIREYPH----ATNAFTQGLVFH-QGHFFESTGHQGTLRQLSLESAQ--------PVWMERLGNIFAEGLASDG--E 106 (268)
T ss_dssp EEEEEEEEEC----CTTCCEEEEEEE-TTEEEEEETTTTEEEECCSSCSS--------CSEEEECTTCCEEEEEECS--S
T ss_pred ceEEEEEEcC----CCccccceEEEE-CCEEEEEcCCCCEEEEEECCCCc--------EEeEECCCCcceeEEEEeC--C
Confidence 3467777765 224667789998 57888999999999999998862 1111 22111112344432 3
Q ss_pred CEEEEEeCCCcEEEEECCCCcEEEEE
Q 004998 670 SQIASSNFEGVVQVGQVLHLIYFSAL 695 (720)
Q Consensus 670 ~~laS~s~D~~v~lWDv~tg~~~~~v 695 (720)
.+....-.++++.++|..|++.+.++
T Consensus 107 ~Ly~ltw~~~~v~V~D~~Tl~~~~ti 132 (268)
T 3nok_A 107 RLYQLTWTEGLLFTWSGMPPQRERTT 132 (268)
T ss_dssp CEEEEESSSCEEEEEETTTTEEEEEE
T ss_pred EEEEEEccCCEEEEEECCcCcEEEEE
Confidence 33444445788888888888888774
No 495
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=91.84 E-value=0.2 Score=53.60 Aligned_cols=85 Identities=11% Similarity=-0.015 Sum_probs=58.7
Q ss_pred cccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEee----------CCCcEEEeeCCcccccccccccceEEecCC-
Q 004998 588 SFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAG----------VNKKIKVFECDAIINENRDIHYPVVEMASR- 656 (720)
Q Consensus 588 ~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~----------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~- 656 (720)
.-.++++++++.-|. .. .++|+|||+++..+. .+++|.+||..+. .++.++.-.
T Consensus 52 D~~t~~v~~~i~vG~-----~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~--------~vv~~I~v~~ 116 (368)
T 1mda_H 52 CAGCGVTLGHSLGAF-----LS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTF--------LPIADIELPD 116 (368)
T ss_dssp ETTTTEEEEEEEECT-----TC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTC--------CEEEEEEETT
T ss_pred ECCCCeEEEEEeCCC-----CC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCC--------CEEEEEECCC
Confidence 446788899888531 23 699999999766664 4789999999886 233333110
Q ss_pred -------CCEEEEEEecCCCCEEEEEeC--CCcEEE--EECCC
Q 004998 657 -------SKLSSICWNSYIKSQIASSNF--EGVVQV--GQVLH 688 (720)
Q Consensus 657 -------~~i~~v~~~~~~~~~laS~s~--D~~v~l--WDv~t 688 (720)
..-..+.++|+++ +|+.+.+ +..|.| ||+.+
T Consensus 117 ~~~~~~g~~P~~ia~SpDGk-~lyVan~~~~~~v~V~~iD~~t 158 (368)
T 1mda_H 117 APRFSVGPRVHIIGNCASSA-CLLFFLFGSSAAAGLSVPGASD 158 (368)
T ss_dssp SCSCCBSCCTTSEEECTTSS-CEEEEECSSSCEEEEEETTTEE
T ss_pred ccccccCCCcceEEEcCCCC-EEEEEccCCCCeEEEEEEchhh
Confidence 1245789999766 5555554 467999 99987
No 496
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=91.79 E-value=0.38 Score=51.69 Aligned_cols=76 Identities=7% Similarity=0.040 Sum_probs=54.0
Q ss_pred EEEECCCCCEE-EEee---------CCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEE-eCCCc
Q 004998 612 SLSFDRDGELF-AAAG---------VNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASS-NFEGV 680 (720)
Q Consensus 612 sv~f~~dg~~l-at~~---------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~-s~D~~ 680 (720)
.++++|++..+ ++-. -..+|-+.|..+.. .+..+.-...+..|.++|+++.+|.++ ..+++
T Consensus 284 ~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~k--------v~~~i~vg~~~~~lavs~D~~~~ly~tn~~~~~ 355 (386)
T 3sjl_D 284 QVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGE--------RLAKFEMGHEIDSINVSQDEKPLLYALSTGDKT 355 (386)
T ss_dssp CEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCC--------EEEEEEEEEEECEEEECSSSSCEEEEEETTTTE
T ss_pred eeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCe--------EEEEEECCCCcceEEECCCCCeEEEEEcCCCCe
Confidence 57789998754 3322 12578888987762 233332234678999999887676665 45999
Q ss_pred EEEEECCCCcEEEEE
Q 004998 681 VQVGQVLHLIYFSAL 695 (720)
Q Consensus 681 v~lWDv~tg~~~~~v 695 (720)
|.|+|+.|++.+.++
T Consensus 356 VsViD~~t~k~~~~i 370 (386)
T 3sjl_D 356 LYIHDAESGEELRSV 370 (386)
T ss_dssp EEEEETTTCCEEEEE
T ss_pred EEEEECCCCcEEEEe
Confidence 999999999999885
No 497
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=91.67 E-value=0.22 Score=57.94 Aligned_cols=58 Identities=7% Similarity=-0.085 Sum_probs=39.6
Q ss_pred CCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE
Q 004998 628 NKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA 694 (720)
Q Consensus 628 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~ 694 (720)
+++|+.||+.++. .+........+..-.+... +.+|..++.||.|++||.+||+.+-+
T Consensus 454 ~g~l~A~D~~tG~--------~~W~~~~~~~~~~g~~~ta-gglvf~gt~dg~l~a~D~~tG~~lw~ 511 (689)
T 1yiq_A 454 SGKLIAWDPVKQQ--------AAWEVPYVTIFNGGTLSTA-GNLVFEGSADGRVIAYAADTGEKLWE 511 (689)
T ss_dssp EEEEEEEETTTTE--------EEEEEEESSSCCCCEEEET-TTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred ceeEEEEECCCCC--------eEeEccCCCCccCccceEC-CCEEEEECCCCcEEEEECCCCcccee
Confidence 4778899988762 2333332222332344443 45889999999999999999999865
No 498
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=90.79 E-value=0.14 Score=55.69 Aligned_cols=30 Identities=7% Similarity=0.210 Sum_probs=26.6
Q ss_pred HHcCceeccCCCCcEEEccCCceEEeccCcc
Q 004998 138 HSQGIVVHNVRPSCFVMSSFNHVSFIESASC 168 (720)
Q Consensus 138 Hs~gIvHrDLKP~NILl~~~~~vkliDfg~a 168 (720)
+...++|+|++|.|||++.++ +.++||+.+
T Consensus 230 ~~~~liHGDl~~~Nil~~~~~-~~lID~e~a 259 (420)
T 2pyw_A 230 RAQALIHGDLHTGSVMVTQDS-TQVIDPEFS 259 (420)
T ss_dssp BCCEEECSCCSGGGEEECSSC-EEECCCTTC
T ss_pred CCCeEEecCCCCCcEEEeCCC-CEEEeCccc
Confidence 357899999999999998776 999999887
No 499
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=90.77 E-value=6.6 Score=39.81 Aligned_cols=87 Identities=13% Similarity=0.101 Sum_probs=58.7
Q ss_pred ccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCC
Q 004998 589 FSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYI 668 (720)
Q Consensus 589 ~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~ 668 (720)
....++++++.. ......++|+++|.++++...+++|..||..... ...........++++.+++
T Consensus 19 ~~~~~~~~~~p~------~~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~---------~~~~~~~~~p~gia~~~dG 83 (306)
T 2p4o_A 19 LAPAKIITSFPV------NTFLENLASAPDGTIFVTNHEVGEIVSITPDGNQ---------QIHATVEGKVSGLAFTSNG 83 (306)
T ss_dssp CCCEEEEEEECT------TCCEEEEEECTTSCEEEEETTTTEEEEECTTCCE---------EEEEECSSEEEEEEECTTS
T ss_pred CCCceEeEeCCC------CCCcceEEECCCCCEEEEeCCCCeEEEECCCCce---------EEEEeCCCCceeEEEcCCC
Confidence 355677777754 2568899999999998888788999999975431 1111223468899999975
Q ss_pred CCEEEEEe-CCC-cEEEEECCCCcE
Q 004998 669 KSQIASSN-FEG-VVQVGQVLHLIY 691 (720)
Q Consensus 669 ~~~laS~s-~D~-~v~lWDv~tg~~ 691 (720)
. ++++.. .++ .|-.+|..+|+.
T Consensus 84 ~-l~vad~~~~~~~v~~~d~~~g~~ 107 (306)
T 2p4o_A 84 D-LVATGWNADSIPVVSLVKSDGTV 107 (306)
T ss_dssp C-EEEEEECTTSCEEEEEECTTSCE
T ss_pred c-EEEEeccCCcceEEEEcCCCCeE
Confidence 4 444332 333 355667788874
No 500
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=89.41 E-value=0.59 Score=52.84 Aligned_cols=79 Identities=13% Similarity=0.032 Sum_probs=54.4
Q ss_pred CeEEEEECCCCCE-EEEeeCCCcEEEeeCCccc---ccccccccce-EEecCCCCEEEEEEecCCCCEEEEEeCCCcEEE
Q 004998 609 LVCSLSFDRDGEL-FAAAGVNKKIKVFECDAII---NENRDIHYPV-VEMASRSKLSSICWNSYIKSQIASSNFEGVVQV 683 (720)
Q Consensus 609 ~V~sv~f~~dg~~-lat~~~d~~i~iwd~~~~~---~~~~~~~~~~-~~~~~~~~i~~v~~~~~~~~~laS~s~D~~v~l 683 (720)
...+|.|+|||++ ++++..+.+|-|+|+++.. ....+....+ .++.-...-.-++|+|++ ....+.--|++|.+
T Consensus 278 ~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~~dG-~aY~t~~ldsqV~k 356 (595)
T 1fwx_A 278 NPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAFDGRG-NAYTSLFLDSQVVK 356 (595)
T ss_dssp SCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEECTTS-EEEEEETTTTEEEE
T ss_pred CceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcceEEECCCC-eEEEEEecCCcEEE
Confidence 3567999999996 7777789999999998641 1111111222 233334456789999976 44445556999999
Q ss_pred EECCC
Q 004998 684 GQVLH 688 (720)
Q Consensus 684 WDv~t 688 (720)
||+.+
T Consensus 357 wdi~~ 361 (595)
T 1fwx_A 357 WNIED 361 (595)
T ss_dssp EEHHH
T ss_pred EEhhH
Confidence 99987
Done!