BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005000
(720 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LSB8|PP235_ARATH Putative pentatricopeptide repeat-containing protein At3g15930
OS=Arabidopsis thaliana GN=PCMP-E51 PE=3 SV=2
Length = 687
Score = 802 bits (2072), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/639 (58%), Positives = 484/639 (75%), Gaps = 7/639 (1%)
Query: 11 STLTQE-----TPLISPIETCESMHQLKQIHSQTIKLGLLTNPTVQNKLVTFCCSE-KGD 64
ST+T+ + IS + C++ Q KQ+HSQ+I G+ NPT Q KL F CS G
Sbjct: 24 STITESISNDYSRFISILGVCKTTDQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGH 83
Query: 65 MKYACKVFRKIPRPSVCLWNTMIKGYSRIDSHKNGVLIYLDMLKSDVRPDNYTFPFLLKG 124
+ YA K+F KIP P V +WN MIKG+S++D GV +YL+MLK V PD++TFPFLL G
Sbjct: 84 VSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNG 143
Query: 125 FTRDI-AVEFGKELHCHVLKFGFDSSVFVQNALISTYCLCGEVDMARGIFDVSYKDDVVT 183
RD A+ GK+LHCHV+KFG S+++VQNAL+ Y LCG +DMARG+FD K+DV +
Sbjct: 144 LKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFS 203
Query: 184 WNAMFSGYKRVKQFDETRKLFGEMERKGVLPTSVTIVLVLSACAKLKDLDVGKRAHRYVK 243
WN M SGY R+K+++E+ +L EMER V PTSVT++LVLSAC+K+KD D+ KR H YV
Sbjct: 204 WNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVS 263
Query: 244 ECKIVPNLILENALTDMYAACGEMGFALEIFGNIKNKDVISWTAIVTGYINRGQVDMARQ 303
ECK P+L LENAL + YAACGEM A+ IF ++K +DVISWT+IV GY+ RG + +AR
Sbjct: 264 ECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLART 323
Query: 304 YFDQMPERDYVLWTAMIDGYLRVNRFREALTLFREMQTSNIRPDEFTIVSILTACANLGA 363
YFDQMP RD + WT MIDGYLR F E+L +FREMQ++ + PDEFT+VS+LTACA+LG+
Sbjct: 324 YFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGS 383
Query: 364 LELGEWVKTYIDKNKVKNDIFVGNALIDMYCKCGDVEKAQRVFREMLRKDKFTWTAMIVG 423
LE+GEW+KTYIDKNK+KND+ VGNALIDMY KCG EKAQ+VF +M ++DKFTWTAM+VG
Sbjct: 384 LEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVG 443
Query: 424 LAINGHGDKSLDMFSQMLRASIIPDEVTYVGVLSACTHTGMVDEGREYFADMTIQHGIEP 483
LA NG G +++ +F QM SI PD++TY+GVLSAC H+GMVD+ R++FA M H IEP
Sbjct: 444 LANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEP 503
Query: 484 NEAHYGCMVDLLGRAGHLNEALEVIKNMPMKPNSIVWGALLGACRVHRDAEMAEMAAKQI 543
+ HYGCMVD+LGRAG + EA E+++ MPM PNSIVWGALLGA R+H D MAE+AAK+I
Sbjct: 504 SLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKI 563
Query: 544 LELDPDNEAVYVLLCNIYAACNRWDNFRELRQMILDRGIKKTPGCSMIEMNGVVHEFVAG 603
LEL+PDN AVY LLCNIYA C RW + RE+R+ I+D IKKTPG S+IE+NG HEFVAG
Sbjct: 564 LELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAG 623
Query: 604 DKSHPQTKEIYLKLDEMTSDLKFVGYMPDISEVFLDVGE 642
DKSH Q++EIY+KL+E+ + F Y+PD SE+ + G+
Sbjct: 624 DKSHLQSEEIYMKLEELAQESTFAAYLPDTSELLFEAGD 662
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 655 bits (1689), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/723 (43%), Positives = 478/723 (66%), Gaps = 6/723 (0%)
Query: 2 FSNSSISPPSTLTQETPLISPIETCESMHQLKQIHSQTIKLGLLTNPTVQNKLVTFCC-S 60
FSN + P+T + + IS IE C S+ QLKQ H I+ G ++P +KL S
Sbjct: 18 FSNPN--QPTTNNERSRHISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALS 75
Query: 61 EKGDMKYACKVFRKIPRPSVCLWNTMIKGYSRIDSHKNGVLIYLDML-KSDVRPDNYTFP 119
++YA KVF +IP+P+ WNT+I+ Y+ + +LDM+ +S P+ YTFP
Sbjct: 76 SFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFP 135
Query: 120 FLLKGFTRDIAVEFGKELHCHVLKFGFDSSVFVQNALISTYCLCGEVDMARGIFDVSYKD 179
FL+K ++ G+ LH +K S VFV N+LI Y CG++D A +F +
Sbjct: 136 FLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEK 195
Query: 180 DVVTWNAMFSGYKRVKQFDETRKLFGEMERKGVLPTSVTIVLVLSACAKLKDLDVGKRAH 239
DVV+WN+M +G+ + D+ +LF +ME + V + VT+V VLSACAK+++L+ G++
Sbjct: 196 DVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVC 255
Query: 240 RYVKECKIVPNLILENALTDMYAACGEMGFALEIFGNIKNKDVISWTAIVTGYINRGQVD 299
Y++E ++ NL L NA+ DMY CG + A +F ++ KD ++WT ++ GY +
Sbjct: 256 SYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYE 315
Query: 300 MARQYFDQMPERDYVLWTAMIDGYLRVNRFREALTLFREMQ-TSNIRPDEFTIVSILTAC 358
AR+ + MP++D V W A+I Y + + EAL +F E+Q N++ ++ T+VS L+AC
Sbjct: 316 AAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSAC 375
Query: 359 ANLGALELGEWVKTYIDKNKVKNDIFVGNALIDMYCKCGDVEKAQRVFREMLRKDKFTWT 418
A +GALELG W+ +YI K+ ++ + V +ALI MY KCGD+EK++ VF + ++D F W+
Sbjct: 376 AQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWS 435
Query: 419 AMIVGLAINGHGDKSLDMFSQMLRASIIPDEVTYVGVLSACTHTGMVDEGREYFADMTIQ 478
AMI GLA++G G++++DMF +M A++ P+ VT+ V AC+HTG+VDE F M
Sbjct: 436 AMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESN 495
Query: 479 HGIEPNEAHYGCMVDLLGRAGHLNEALEVIKNMPMKPNSIVWGALLGACRVHRDAEMAEM 538
+GI P E HY C+VD+LGR+G+L +A++ I+ MP+ P++ VWGALLGAC++H + +AEM
Sbjct: 496 YGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEM 555
Query: 539 AAKQILELDPDNEAVYVLLCNIYAACNRWDNFRELRQMILDRGIKKTPGCSMIEMNGVVH 598
A ++LEL+P N+ +VLL NIYA +W+N ELR+ + G+KK PGCS IE++G++H
Sbjct: 556 ACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIH 615
Query: 599 EFVAGDKSHPQTKEIYLKLDEMTSDLKFVGYMPDISEVFLDVGEED-KERAVYQHSEKLA 657
EF++GD +HP ++++Y KL E+ LK GY P+IS+V + EE+ KE+++ HSEKLA
Sbjct: 616 EFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLA 675
Query: 658 MAFGLISSGPGVTIRIVKNLRMCVDCHRMAKLVSMVYDREVIVRDKTRFHHFKHGSCSCK 717
+ +GLIS+ IR++KNLR+C DCH +AKL+S +YDRE+IVRD+ RFHHF++G CSC
Sbjct: 676 ICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCN 735
Query: 718 DYW 720
D+W
Sbjct: 736 DFW 738
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 596 bits (1536), Expect = e-169, Method: Compositional matrix adjust.
Identities = 303/754 (40%), Positives = 450/754 (59%), Gaps = 66/754 (8%)
Query: 2 FSNSSISPPSTLTQETPLISPIETCESMHQLKQIHSQTIKLGLLTNPTVQNKLVTFCCSE 61
F SS PP + P +S + C+++ L+ IH+Q IK+GL +KL+ FC
Sbjct: 19 FLPSSSDPPYDSIRNHPSLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILS 78
Query: 62 KG--DMKYACKVFRKIPRPSVCLWNTMIKGYSRIDSHKNGVLIYLDMLKSDVRPDNYTFP 119
+ YA VF+ I P++ +WNTM +G++ + + +Y+ M+ + P++YTFP
Sbjct: 79 PHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFP 138
Query: 120 FLLKGFTRDIAVEFGKELHCHVLKFGFDSSVFVQNALISTYCLCGEVDMARGIFD----- 174
F+LK + A + G+++H HVLK G D ++V +LIS Y G ++ A +FD
Sbjct: 139 FVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHR 198
Query: 175 --VSYK------------------------DDVVTWNAMFSGYKRVKQFDETRKLFGEME 208
VSY DVV+WNAM SGY + E +LF +M
Sbjct: 199 DVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMM 258
Query: 209 RKGVLPTSVTIVLVLSACAKLKDLDVGKRAHRYVKECKIVPNLILENALTDMYAACGEMG 268
+ V P T+V V+SACA+ +++G++ H ++ + NL + NAL D+Y+ CGE+
Sbjct: 259 KTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGEL- 317
Query: 269 FALEIFGNIKNKDVISWTAIVTGYINRGQVDMARQYFDQMPERDYVLWTAMIDGYLRVNR 328
+ A F+++P +D + W +I GY +N
Sbjct: 318 ------------------------------ETACGLFERLPYKDVISWNTLIGGYTHMNL 347
Query: 329 FREALTLFREMQTSNIRPDEFTIVSILTACANLGALELGEWVKTYIDK--NKVKNDIFVG 386
++EAL LF+EM S P++ T++SIL ACA+LGA+++G W+ YIDK V N +
Sbjct: 348 YKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLR 407
Query: 387 NALIDMYCKCGDVEKAQRVFREMLRKDKFTWTAMIVGLAINGHGDKSLDMFSQMLRASII 446
+LIDMY KCGD+E A +VF +L K +W AMI G A++G D S D+FS+M + I
Sbjct: 408 TSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQ 467
Query: 447 PDEVTYVGVLSACTHTGMVDEGREYFADMTIQHGIEPNEAHYGCMVDLLGRAGHLNEALE 506
PD++T+VG+LSAC+H+GM+D GR F MT + + P HYGCM+DLLG +G EA E
Sbjct: 468 PDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEE 527
Query: 507 VIKNMPMKPNSIVWGALLGACRVHRDAEMAEMAAKQILELDPDNEAVYVLLCNIYAACNR 566
+I M M+P+ ++W +LL AC++H + E+ E A+ +++++P+N YVLL NIYA+ R
Sbjct: 528 MINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGR 587
Query: 567 WDNFRELRQMILDRGIKKTPGCSMIEMNGVVHEFVAGDKSHPQTKEIYLKLDEMTSDLKF 626
W+ + R ++ D+G+KK PGCS IE++ VVHEF+ GDK HP+ +EIY L+EM L+
Sbjct: 588 WNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEK 647
Query: 627 VGYMPDISEVFLDVGEEDKERAVYQHSEKLAMAFGLISSGPGVTIRIVKNLRMCVDCHRM 686
G++PD SEV ++ EE KE A+ HSEKLA+AFGLIS+ PG + IVKNLR+C +CH
Sbjct: 648 AGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEA 707
Query: 687 AKLVSMVYDREVIVRDKTRFHHFKHGSCSCKDYW 720
KL+S +Y RE+I RD+TRFHHF+ G CSC DYW
Sbjct: 708 TKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
>sp|O23337|PP311_ARATH Pentatricopeptide repeat-containing protein At4g14820
OS=Arabidopsis thaliana GN=PCMP-H3 PE=2 SV=1
Length = 722
Score = 563 bits (1450), Expect = e-159, Method: Compositional matrix adjust.
Identities = 288/728 (39%), Positives = 442/728 (60%), Gaps = 20/728 (2%)
Query: 6 SISPPSTLTQETPLISPIETCESMHQLKQIHSQTIKLGLLTNPTVQNKLVTFC-----CS 60
++ PP T ++ + C+S++ +KQ+H+ ++ + +KL +F S
Sbjct: 2 TLPPPIASTAANTILEKLSFCKSLNHIKQLHAHILR------TVINHKLNSFLFNLSVSS 55
Query: 61 EKGDMKYACKVFRKIPRP-SVCLWNTMIKGYSRIDSHKNGVLIYLDMLKSDVRPDNYTFP 119
++ YA VF IP P ++N ++ SR + +L Y + R D ++F
Sbjct: 56 SSINLSYALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFL 115
Query: 120 FLLKGFTRDIAVEFGKELHCHVLKFGFDSSVFVQNALISTYCLCGEVDMARGIFDVSYKD 179
+LK ++ A+ G ELH K FV+ + Y CG ++ AR +FD
Sbjct: 116 PILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHR 175
Query: 180 DVVTWNAMFSGYKRVKQFDETRKLFGEMERKGVLPTSVTIVLVLSACAKLKDLDVGKRAH 239
DVVTWN M Y R DE KLF EM+ V+P + + ++SAC + ++ + +
Sbjct: 176 DVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIY 235
Query: 240 RYVKECKIVPNLILENALTDMYAACGEMGFALEIFGNIKNKDVISWTAIVTGYINRGQVD 299
++ E + + L AL MYA G M A E F + +++ TA+V+GY G++D
Sbjct: 236 EFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLD 295
Query: 300 MARQYFDQMPERDYVLWTAMIDGYLRVNRFREALTLFREMQTSNIRPDEFTIVSILTACA 359
A+ FDQ ++D V WT MI Y+ + +EAL +F EM S I+PD ++ S+++ACA
Sbjct: 296 DAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACA 355
Query: 360 NLGALELGEWVKTYIDKNKVKNDIFVGNALIDMYCKCGDVEKAQRVFREMLRKDKFTWTA 419
NLG L+ +WV + I N +++++ + NALI+MY KCG ++ + VF +M R++ +W++
Sbjct: 356 NLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSS 415
Query: 420 MIVGLAINGHGDKSLDMFSQMLRASIIPDEVTYVGVLSACTHTGMVDEGREYFADMTIQH 479
MI L+++G +L +F++M + ++ P+EVT+VGVL C+H+G+V+EG++ FA MT ++
Sbjct: 416 MINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEY 475
Query: 480 GIEPNEAHYGCMVDLLGRAGHLNEALEVIKNMPMKPNSIVWGALLGACRVHRDAEMAEMA 539
I P HYGCMVDL GRA L EALEVI++MP+ N ++WG+L+ ACR+H + E+ + A
Sbjct: 476 NITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFA 535
Query: 540 AKQILELDPDNEAVYVLLCNIYAACNRWDNFRELRQMILDRGIKKTPGCSMIEMNGVVHE 599
AK+ILEL+PD++ VL+ NIYA RW++ R +R+++ ++ + K G S I+ NG HE
Sbjct: 536 AKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHE 595
Query: 600 FVAGDKSHPQTKEIYLKLDEMTSDLKFVGYMPDISEVFLDVGEEDKERAVYQHSEKLAMA 659
F+ GDK H Q+ EIY KLDE+ S LK GY+PD V +DV EE+K+ V HSEKLA+
Sbjct: 596 FLIGDKRHKQSNEIYAKLDEVVSKLKLAGYVPDCGSVLVDVEEEEKKDLVLWHSEKLALC 655
Query: 660 FGLISS-------GPGVTIRIVKNLRMCVDCHRMAKLVSMVYDREVIVRDKTRFHHFKHG 712
FGL++ GV IRIVKNLR+C DCH KLVS VY+RE+IVRD+TRFH +K+G
Sbjct: 656 FGLMNEEKEEEKDSCGV-IRIVKNLRVCEDCHLFFKLVSKVYEREIIVRDRTRFHCYKNG 714
Query: 713 SCSCKDYW 720
CSC+DYW
Sbjct: 715 LCSCRDYW 722
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 554 bits (1428), Expect = e-157, Method: Compositional matrix adjust.
Identities = 273/689 (39%), Positives = 428/689 (62%), Gaps = 3/689 (0%)
Query: 34 QIHSQTIKLGLLTNPTVQNKLVTFCCSEKGDMKYACKVFRKIPRPSVCLWNTMIKGYSRI 93
QIH +K+G + VQN LV F +E G++ A KVF ++ +V W +MI GY+R
Sbjct: 155 QIHGLIVKMGYAKDLFVQNSLVHFY-AECGELDSARKVFDEMSERNVVSWTSMICGYARR 213
Query: 94 DSHKNGVLIYLDMLK-SDVRPDNYTFPFLLKGFTRDIAVEFGKELHCHVLKFGFDSSVFV 152
D K+ V ++ M++ +V P++ T ++ + +E G++++ + G + + +
Sbjct: 214 DFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLM 273
Query: 153 QNALISTYCLCGEVDMARGIFDVSYKDDVVTWNAMFSGYKRVKQFDETRKLFGEMERKGV 212
+AL+ Y C +D+A+ +FD ++ NAM S Y R E +F M GV
Sbjct: 274 VSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGV 333
Query: 213 LPTSVTIVLVLSACAKLKDLDVGKRAHRYVKECKIVPNLILENALTDMYAACGEMGFALE 272
P ++++ +S+C++L+++ GK H YV + NAL DMY C A
Sbjct: 334 RPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFR 393
Query: 273 IFGNIKNKDVISWTAIVTGYINRGQVDMARQYFDQMPERDYVLWTAMIDGYLRVNRFREA 332
IF + NK V++W +IV GY+ G+VD A + F+ MPE++ V W +I G ++ + F EA
Sbjct: 394 IFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEA 453
Query: 333 LTLFREMQTS-NIRPDEFTIVSILTACANLGALELGEWVKTYIDKNKVKNDIFVGNALID 391
+ +F MQ+ + D T++SI +AC +LGAL+L +W+ YI+KN ++ D+ +G L+D
Sbjct: 454 IEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVD 513
Query: 392 MYCKCGDVEKAQRVFREMLRKDKFTWTAMIVGLAINGHGDKSLDMFSQMLRASIIPDEVT 451
M+ +CGD E A +F + +D WTA I +A+ G+ ++++++F M+ + PD V
Sbjct: 514 MFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVA 573
Query: 452 YVGVLSACTHTGMVDEGREYFADMTIQHGIEPNEAHYGCMVDLLGRAGHLNEALEVIKNM 511
+VG L+AC+H G+V +G+E F M HG+ P + HYGCMVDLLGRAG L EA+++I++M
Sbjct: 574 FVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDM 633
Query: 512 PMKPNSIVWGALLGACRVHRDAEMAEMAAKQILELDPDNEAVYVLLCNIYAACNRWDNFR 571
PM+PN ++W +LL ACRV + EMA AA++I L P+ YVLL N+YA+ RW++
Sbjct: 634 PMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMA 693
Query: 572 ELRQMILDRGIKKTPGCSMIEMNGVVHEFVAGDKSHPQTKEIYLKLDEMTSDLKFVGYMP 631
++R + ++G++K PG S I++ G HEF +GD+SHP+ I LDE++ +G++P
Sbjct: 694 KVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVP 753
Query: 632 DISEVFLDVGEEDKERAVYQHSEKLAMAFGLISSGPGVTIRIVKNLRMCVDCHRMAKLVS 691
D+S V +DV E++K + +HSEKLAMA+GLISS G TIRIVKNLR+C DCH AK S
Sbjct: 754 DLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFAS 813
Query: 692 MVYDREVIVRDKTRFHHFKHGSCSCKDYW 720
VY+RE+I+RD RFH+ + G CSC D+W
Sbjct: 814 KVYNREIILRDNNRFHYIRQGKCSCGDFW 842
Score = 246 bits (629), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 155/518 (29%), Positives = 256/518 (49%), Gaps = 50/518 (9%)
Query: 1 MFSNSSISPPSTLTQE-----TPLISPIETCESMHQLKQIHSQTIKLGLLTNPTVQNKLV 55
+ + ++ + PS L Q TP S ++ C+++ +LK H K GL + + KLV
Sbjct: 14 VLATTTTTKPSLLNQSKCTKATP--SSLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLV 71
Query: 56 TFCC--SEKGDMKYACKVFRKIPRPSVC-LWNTMIKGYSRIDSHKNGVLIYLDMLKSDVR 112
C + + +A +VF C ++N++I+GY+ +L++L M+ S +
Sbjct: 72 ARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGIS 131
Query: 113 PDNYTFPFLLKGFTRDIAVEFGKELHCHVLKFGFDSSVFVQNALISTYCLCGEVDMARGI 172
PD YTFPF L + A G ++H ++K G+ +FVQN+L+ Y CGE+D AR +
Sbjct: 132 PDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKV 191
Query: 173 FDVSYKDDVVTWNAMFSGYKRVKQFDETRKLFGEMER-KGVLPTSVTIVLVLSACAKLKD 231
FD + +VV+W +M GY R + LF M R + V P SVT+V V+SACAKL+D
Sbjct: 192 FDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLED 251
Query: 232 LDVGKRAHRYVKECKIVPNLILENALTDMYAACGEMGFALEIFGNIKNKDVISWTAIVTG 291
L+ G++ + +++ I N ++ +AL DMY C
Sbjct: 252 LETGEKVYAFIRNSGIEVNDLMVSALVDMYMKC--------------------------- 284
Query: 292 YINRGQVDMARQYFDQMPERDYVLWTAMIDGYLRVNRFREALTLFREMQTSNIRPDEFTI 351
+D+A++ FD+ + L AM Y+R REAL +F M S +RPD ++
Sbjct: 285 ----NAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISM 340
Query: 352 VSILTACANLGALELGEWVKTYIDKNKVKNDIFVGNALIDMYCKCGDVEKAQRVFREMLR 411
+S +++C+ L + G+ Y+ +N ++ + NALIDMY KC + A R+F M
Sbjct: 341 LSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSN 400
Query: 412 KDKFTWTAMIVGLAINGHGDKSLDMFSQMLRASIIPDEVTYVGVLSACTHTGMVDEGREY 471
K TW +++ G NG D + + F M +I V++ ++S + +E E
Sbjct: 401 KTVVTWNSIVAGYVENGEVDAAWETFETMPEKNI----VSWNTIISGLVQGSLFEEAIEV 456
Query: 472 FADMTIQHGIEPNEAHYGCMVDLLGRAGHLNEALEVIK 509
F M Q G+ + M+ + GHL AL++ K
Sbjct: 457 FCSMQSQEGVNADGV---TMMSIASACGHLG-ALDLAK 490
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 549 bits (1415), Expect = e-155, Method: Compositional matrix adjust.
Identities = 282/724 (38%), Positives = 427/724 (58%), Gaps = 45/724 (6%)
Query: 1 MFSNSSISPPSTLTQETPLISPIETCESMHQLKQIHSQTIKLGLLTNPTVQNKLVTFCCS 60
+++NS I S S I++ QLKQIH++ + LGL + + KL+ S
Sbjct: 12 LYTNSGIHSDSFYA------SLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLI-HASS 64
Query: 61 EKGDMKYACKVFRKIPRPSVCLWNTMIKGYSRIDSHKNGVLIYLDMLKSDVRPDNYTFPF 120
GD+ +A +VF +PRP + WN +I+GYSR + ++ +L+Y +M + V PD++TFP
Sbjct: 65 SFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPH 124
Query: 121 LLKGFTRDIAVEFGKELHCHVLKFGFDSSVFVQNALISTYCLCGEVDMARGIFD--VSYK 178
LLK + ++ G+ +H V + GFD+ VFVQN LI+ Y C + AR +F+ +
Sbjct: 125 LLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPE 184
Query: 179 DDVVTWNAMFSGYKRVKQFDETRKLFGEMERKGVLPTSVTIVLVLSACAKLKDLDVGKRA 238
+V+W A+ S Y + + E ++F +M + V P V +V VL+A L+DL G+
Sbjct: 185 RTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSI 244
Query: 239 HRYVKE--CKIVPNLILENALTDMYAACGEMGFALEIFGNIKNKDVISWTAIVTGYINRG 296
H V + +I P+L++ +L MYA CG
Sbjct: 245 HASVVKMGLEIEPDLLI--SLNTMYAKCG------------------------------- 271
Query: 297 QVDMARQYFDQMPERDYVLWTAMIDGYLRVNRFREALTLFREMQTSNIRPDEFTIVSILT 356
QV A+ FD+M + +LW AMI GY + REA+ +F EM ++RPD +I S ++
Sbjct: 272 QVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAIS 331
Query: 357 ACANLGALELGEWVKTYIDKNKVKNDIFVGNALIDMYCKCGDVEKAQRVFREMLRKDKFT 416
ACA +G+LE + Y+ ++ ++D+F+ +ALIDM+ KCG VE A+ VF L +D
Sbjct: 332 ACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVV 391
Query: 417 WTAMIVGLAINGHGDKSLDMFSQMLRASIIPDEVTYVGVLSACTHTGMVDEGREYFADMT 476
W+AMIVG ++G +++ ++ M R + P++VT++G+L AC H+GMV EG +F M
Sbjct: 392 WSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMA 451
Query: 477 IQHGIEPNEAHYGCMVDLLGRAGHLNEALEVIKNMPMKPNSIVWGALLGACRVHRDAEMA 536
H I P + HY C++DLLGRAGHL++A EVIK MP++P VWGALL AC+ HR E+
Sbjct: 452 -DHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELG 510
Query: 537 EMAAKQILELDPDNEAVYVLLCNIYAACNRWDNFRELRQMILDRGIKKTPGCSMIEMNGV 596
E AA+Q+ +DP N YV L N+YAA WD E+R + ++G+ K GCS +E+ G
Sbjct: 511 EYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGR 570
Query: 597 VHEFVAGDKSHPQTKEIYLKLDEMTSDLKFVGYMPDISEVFLDVGEEDKERAVYQHSEKL 656
+ F GDKSHP+ +EI +++ + S LK G++ + D+ +E+ E + HSE++
Sbjct: 571 LEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERI 630
Query: 657 AMAFGLISSGPGVTIRIVKNLRMCVDCHRMAKLVSMVYDREVIVRDKTRFHHFKHGSCSC 716
A+A+GLIS+ G +RI KNLR CV+CH KL+S + DRE++VRD RFHHFK G CSC
Sbjct: 631 AIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSC 690
Query: 717 KDYW 720
DYW
Sbjct: 691 GDYW 694
>sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820
OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1
Length = 685
Score = 535 bits (1377), Expect = e-151, Method: Compositional matrix adjust.
Identities = 277/716 (38%), Positives = 420/716 (58%), Gaps = 32/716 (4%)
Query: 5 SSISPPSTLTQETPLISPIETCESMHQLKQIHSQTIKLGLLTNPTVQNKLVTFCCSEKGD 64
S ++ PS ++ + + I +++ LKQIH I L + + N L+ +
Sbjct: 2 SIVTVPSATSKVQQIKTLISVACTVNHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFR-Q 60
Query: 65 MKYACKVFRKIPRPSVCLWNTMIKGYSRIDSHKNGVLIYLDMLKSDVRPDNYTFPFLLKG 124
KY+ +F P++ L+N++I G+ + ++L + K + +TFP +LK
Sbjct: 61 TKYSYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKA 120
Query: 125 FTRDIAVEFGKELHCHVLKFGFDSSVFVQNALISTYCLCGEVDMARGIFDVSYKDDVVTW 184
TR + + G +LH V+K GF+ V +L+S Y G ++ A +FD VVTW
Sbjct: 121 CTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTW 180
Query: 185 NAMFSGYKRVKQFDETRKLFGEMERKGVLPTSVTIVLVLSACAKLKDLDVGKRAHRYVKE 244
A+FSGY + E LF +M GV P S IV VLSAC + DLD G+ +Y++E
Sbjct: 181 TALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEE 240
Query: 245 CKIVPNLILENALTDMYAACGEMGFALEIFGNIKNKDVISWTAIVTGYINRGQVDMARQY 304
++ N + L ++YA CG+M A +F ++ KD+++W+ ++ GY +
Sbjct: 241 MEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYAS---------- 290
Query: 305 FDQMPERDYVLWTAMIDGYLRVNRFREALTLFREMQTSNIRPDEFTIVSILTACANLGAL 364
+ P +E + LF +M N++PD+F+IV L++CA+LGAL
Sbjct: 291 -NSFP--------------------KEGIELFLQMLQENLKPDQFSIVGFLSSCASLGAL 329
Query: 365 ELGEWVKTYIDKNKVKNDIFVGNALIDMYCKCGDVEKAQRVFREMLRKDKFTWTAMIVGL 424
+LGEW + ID+++ ++F+ NALIDMY KCG + + VF+EM KD A I GL
Sbjct: 330 DLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGL 389
Query: 425 AINGHGDKSLDMFSQMLRASIIPDEVTYVGVLSACTHTGMVDEGREYFADMTIQHGIEPN 484
A NGH S +F Q + I PD T++G+L C H G++ +G +F ++ + ++
Sbjct: 390 AKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRT 449
Query: 485 EAHYGCMVDLLGRAGHLNEALEVIKNMPMKPNSIVWGALLGACRVHRDAEMAEMAAKQIL 544
HYGCMVDL GRAG L++A +I +MPM+PN+IVWGALL CR+ +D ++AE K+++
Sbjct: 450 VEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELI 509
Query: 545 ELDPDNEAVYVLLCNIYAACNRWDNFRELRQMILDRGIKKTPGCSMIEMNGVVHEFVAGD 604
L+P N YV L NIY+ RWD E+R M+ +G+KK PG S IE+ G VHEF+A D
Sbjct: 510 ALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADD 569
Query: 605 KSHPQTKEIYLKLDEMTSDLKFVGYMPDISEVFLDVGEEDKERAVYQHSEKLAMAFGLIS 664
KSHP + +IY KL+++ ++++ +G++P VF DV EE+KER + HSEKLA+A GLIS
Sbjct: 570 KSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEEEEKERVLGYHSEKLAVALGLIS 629
Query: 665 SGPGVTIRIVKNLRMCVDCHRMAKLVSMVYDREVIVRDKTRFHHFKHGSCSCKDYW 720
+ G IR+VKNLR+C DCH + KL+S + RE++VRD RFH F +GSCSC DYW
Sbjct: 630 TDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCSCNDYW 685
>sp|Q9SJZ3|PP169_ARATH Pentatricopeptide repeat-containing protein At2g22410,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E28 PE=2
SV=1
Length = 681
Score = 524 bits (1350), Expect = e-148, Method: Compositional matrix adjust.
Identities = 247/610 (40%), Positives = 395/610 (64%), Gaps = 4/610 (0%)
Query: 12 TLTQETPLISPIETCESMHQLKQIHSQTIKLGLLTNPTVQNKLVTFCC-SEKGDMKYACK 70
+ PL+S +E C+ + LKQI +Q I GL+ +P ++L+ FC SE + Y+ K
Sbjct: 49 SFVLHNPLLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVK 108
Query: 71 VFRKIPRPSVCLWNTMIKGYSRIDSHKNGVLIYLDMLKS---DVRPDNYTFPFLLKGFTR 127
+ + I P++ WN I+G+S ++ K L+Y ML+ + RPD++T+P L K
Sbjct: 109 ILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCAD 168
Query: 128 DIAVEFGKELHCHVLKFGFDSSVFVQNALISTYCLCGEVDMARGIFDVSYKDDVVTWNAM 187
G + HVLK + V NA I + CG+++ AR +FD S D+V+WN +
Sbjct: 169 LRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCL 228
Query: 188 FSGYKRVKQFDETRKLFGEMERKGVLPTSVTIVLVLSACAKLKDLDVGKRAHRYVKECKI 247
+GYK++ + ++ ++ ME +GV P VT++ ++S+C+ L DL+ GK + YVKE +
Sbjct: 229 INGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGL 288
Query: 248 VPNLILENALTDMYAACGEMGFALEIFGNIKNKDVISWTAIVTGYINRGQVDMARQYFDQ 307
+ L NAL DM++ CG++ A IF N++ + ++SWT +++GY G +D++R+ FD
Sbjct: 289 RMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDD 348
Query: 308 MPERDYVLWTAMIDGYLRVNRFREALTLFREMQTSNIRPDEFTIVSILTACANLGALELG 367
M E+D VLW AMI G ++ R ++AL LF+EMQTSN +PDE T++ L+AC+ LGAL++G
Sbjct: 349 MEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVG 408
Query: 368 EWVKTYIDKNKVKNDIFVGNALIDMYCKCGDVEKAQRVFREMLRKDKFTWTAMIVGLAIN 427
W+ YI+K + ++ +G +L+DMY KCG++ +A VF + ++ T+TA+I GLA++
Sbjct: 409 IWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALH 468
Query: 428 GHGDKSLDMFSQMLRASIIPDEVTYVGVLSACTHTGMVDEGREYFADMTIQHGIEPNEAH 487
G ++ F++M+ A I PDE+T++G+LSAC H GM+ GR+YF+ M + + P H
Sbjct: 469 GDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKH 528
Query: 488 YGCMVDLLGRAGHLNEALEVIKNMPMKPNSIVWGALLGACRVHRDAEMAEMAAKQILELD 547
Y MVDLLGRAG L EA ++++MPM+ ++ VWGALL CR+H + E+ E AAK++LELD
Sbjct: 529 YSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELD 588
Query: 548 PDNEAVYVLLCNIYAACNRWDNFRELRQMILDRGIKKTPGCSMIEMNGVVHEFVAGDKSH 607
P + +YVLL +Y N W++ + R+M+ +RG++K PGCS IE+NG+V EF+ DKS
Sbjct: 589 PSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSR 648
Query: 608 PQTKEIYLKL 617
P++++IY +L
Sbjct: 649 PESEKIYDRL 658
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 518 bits (1334), Expect = e-146, Method: Compositional matrix adjust.
Identities = 278/790 (35%), Positives = 436/790 (55%), Gaps = 76/790 (9%)
Query: 3 SNSSISPPSTLTQETPLISPIETCESMHQLKQIHSQTIKLGLLTNPTVQNKLVTFCCSEK 62
S+++ + L + + + S+ L Q H+Q I G + ++ KL T S+
Sbjct: 7 SSATAETTAALISKNTYLDFFKRSTSISHLAQTHAQIILHGFRNDISLLTKL-TQRLSDL 65
Query: 63 GDMKYACKVFRKIPRPSVCLWNTMIKGYSRIDSHKNGVLIYLDMLKS-DVRPDNYTFPFL 121
G + YA +F + RP V L+N +++G+S +S + + ++ + KS D++P++ T+ F
Sbjct: 66 GAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFA 125
Query: 122 LK---GFTRDIAVEFGKELHCHVLKFGFDSSVFVQNALISTYCLCGEVDMARGIFDVSYK 178
+ GF D A G+ +H + G DS + + + ++ Y V+ AR +FD +
Sbjct: 126 ISAASGFRDDRA---GRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPE 182
Query: 179 DDVVTWNAMFSGYKRVKQFDETRKLFGEMERKGVLPTSVTIVL-VLSACAKLKDLDVGKR 237
D + WN M SGY++ + + E+ ++F ++ + T +L +L A A+L++L +G +
Sbjct: 183 KDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQ 242
Query: 238 AHR--------------------YVKECKIV-----------PNLILENALTDMYAACGE 266
H Y K KI P+++ NA+ Y + GE
Sbjct: 243 IHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGE 302
Query: 267 MGFALEIF-------GNIKNKDVISW-----------------------------TAIVT 290
+L +F +++ ++S TA+ T
Sbjct: 303 TELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTT 362
Query: 291 GYINRGQVDMARQYFDQMPERDYVLWTAMIDGYLRVNRFREALTLFREMQTSNIRPDEFT 350
Y +++ AR+ FD+ PE+ W AMI GY + +A++LFREMQ S P+ T
Sbjct: 363 VYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVT 422
Query: 351 IVSILTACANLGALELGEWVKTYIDKNKVKNDIFVGNALIDMYCKCGDVEKAQRVFREML 410
I IL+ACA LGAL LG+WV + ++ I+V ALI MY KCG + +A+R+F M
Sbjct: 423 ITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMT 482
Query: 411 RKDKFTWTAMIVGLAINGHGDKSLDMFSQMLRASIIPDEVTYVGVLSACTHTGMVDEGRE 470
+K++ TW MI G ++G G ++L++F +ML + I P VT++ VL AC+H G+V EG E
Sbjct: 483 KKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDE 542
Query: 471 YFADMTIQHGIEPNEAHYGCMVDLLGRAGHLNEALEVIKNMPMKPNSIVWGALLGACRVH 530
F M ++G EP+ HY CMVD+LGRAGHL AL+ I+ M ++P S VW LLGACR+H
Sbjct: 543 IFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIH 602
Query: 531 RDAEMAEMAAKQILELDPDNEAVYVLLCNIYAACNRWDNFRELRQMILDRGIKKTPGCSM 590
+D +A ++++ ELDPDN +VLL NI++A + +RQ R + K PG ++
Sbjct: 603 KDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTL 662
Query: 591 IEMNGVVHEFVAGDKSHPQTKEIYLKLDEMTSDLKFVGYMPDISEVFLDVGEEDKERAVY 650
IE+ H F +GD+SHPQ KEIY KL+++ ++ GY P+ DV EE++E V
Sbjct: 663 IEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEEEERELMVK 722
Query: 651 QHSEKLAMAFGLISSGPGVTIRIVKNLRMCVDCHRMAKLVSMVYDREVIVRDKTRFHHFK 710
HSE+LA+AFGLI++ PG IRI+KNLR+C+DCH + KL+S + +R ++VRD RFHHFK
Sbjct: 723 VHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHFK 782
Query: 711 HGSCSCKDYW 720
G CSC DYW
Sbjct: 783 DGVCSCGDYW 792
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 513 bits (1320), Expect = e-144, Method: Compositional matrix adjust.
Identities = 264/697 (37%), Positives = 406/697 (58%), Gaps = 37/697 (5%)
Query: 60 SEKGDMKYACKVFRKIPRPSVCLWNTMIKGYSRIDSHKNGVLIYLDMLKSDVRPDNYTFP 119
S++GDM C+ F ++P+ W TMI GY I + + + DM+K + P +T
Sbjct: 91 SKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLT 150
Query: 120 FLLKGFTRDIAVEFGKELHCHVLKFGFDSSVFVQNALISTYCLCGEVDMARGIFDVSYKD 179
+L +E GK++H ++K G +V V N+L++ Y CG+ MA+ +FD
Sbjct: 151 NVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVR 210
Query: 180 DVVTWNAMFSGYKRVKQFDETRKLFGEMERKGVL-------------------------- 213
D+ +WNAM + + +V Q D F +M + ++
Sbjct: 211 DISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKML 270
Query: 214 ------PTSVTIVLVLSACAKLKDLDVGKRAHRYVKECKIVPNLILENALTDMYAACGEM 267
P T+ VLSACA L+ L +GK+ H ++ + I+ NAL MY+ CG +
Sbjct: 271 RDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGV 330
Query: 268 GFALEIFGNIKNKD--VISWTAIVTGYINRGQVDMARQYFDQMPERDYVLWTAMIDGYLR 325
A + KD + +TA++ GYI G ++ A+ F + +RD V WTAMI GY +
Sbjct: 331 ETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQ 390
Query: 326 VNRFREALTLFREMQTSNIRPDEFTIVSILTACANLGALELGEWVKTYIDKNKVKNDIFV 385
+ EA+ LFR M RP+ +T+ ++L+ ++L +L G+ + K+ + V
Sbjct: 391 HGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSV 450
Query: 386 GNALIDMYCKCGDVEKAQRVFREMLR--KDKFTWTAMIVGLAINGHGDKSLDMFSQMLRA 443
NALI MY K G++ A R F +++R +D +WT+MI+ LA +GH +++L++F ML
Sbjct: 451 SNALITMYAKAGNITSASRAF-DLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLME 509
Query: 444 SIIPDEVTYVGVLSACTHTGMVDEGREYFADMTIQHGIEPNEAHYGCMVDLLGRAGHLNE 503
+ PD +TYVGV SACTH G+V++GR+YF M I P +HY CMVDL GRAG L E
Sbjct: 510 GLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQE 569
Query: 504 ALEVIKNMPMKPNSIVWGALLGACRVHRDAEMAEMAAKQILELDPDNEAVYVLLCNIYAA 563
A E I+ MP++P+ + WG+LL ACRVH++ ++ ++AA+++L L+P+N Y L N+Y+A
Sbjct: 570 AQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSA 629
Query: 564 CNRWDNFRELRQMILDRGIKKTPGCSMIEMNGVVHEFVAGDKSHPQTKEIYLKLDEMTSD 623
C +W+ ++R+ + D +KK G S IE+ VH F D +HP+ EIY+ + ++ +
Sbjct: 630 CGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDE 689
Query: 624 LKFVGYMPDISEVFLDVGEEDKERAVYQHSEKLAMAFGLISSGPGVTIRIVKNLRMCVDC 683
+K +GY+PD + V D+ EE KE+ + HSEKLA+AFGLIS+ T+RI+KNLR+C DC
Sbjct: 690 IKKMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDC 749
Query: 684 HRMAKLVSMVYDREVIVRDKTRFHHFKHGSCSCKDYW 720
H K +S + RE+IVRD TRFHHFK G CSC+DYW
Sbjct: 750 HTAIKFISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786
Score = 199 bits (506), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 138/532 (25%), Positives = 254/532 (47%), Gaps = 53/532 (9%)
Query: 84 NTMIKGYSRIDSHKNGVLIYLDMLKSDVRPDNYTFPFLLKGFTRDIAVEFGKELHCHVLK 143
N + K ++ + L++ ++KS + Y L+ +++ G LH L
Sbjct: 18 NLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKT-----GYALHARKL- 71
Query: 144 FGFDS----SVFVQNALISTYCLCGEVDMARGIFDVSYKDDVVTWNAMFSGYKRVKQFDE 199
FD + F N ++S Y G++D FD + D V+W M GYK + Q+ +
Sbjct: 72 --FDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHK 129
Query: 200 TRKLFGEMERKGVLPTSVTIVLVLSACAKLKDLDVGKRAHRYVKECKIVPNLILENALTD 259
++ G+M ++G+ PT T+ VL++ A + ++ GK+ H ++ + + N+ + N+L +
Sbjct: 130 AIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLN 189
Query: 260 MYAACGEMGFALEIFGNIKNKDVISWTAIVTGYINRGQVDMARQYFDQMPERDYVLWTAM 319
MYA CG+ A +F + +D+ SW A++ ++ GQ+D+A F+QM ERD V W +M
Sbjct: 190 MYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSM 249
Query: 320 IDGYLRVNRFREALTLFREM-QTSNIRPDEFTIVSILTACANLGALELGEWVKTYIDKNK 378
I G+ + AL +F +M + S + PD FT+ S+L+ACANL L +G+ + ++I
Sbjct: 250 ISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTG 309
Query: 379 VKNDIFVGNALIDMYCKCGDVEKAQR---------------------------------V 405
V NALI MY +CG VE A+R +
Sbjct: 310 FDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNI 369
Query: 406 FREMLRKDKFTWTAMIVGLAINGHGDKSLDMFSQMLRASIIPDEVTYVGVLSACTHTGMV 465
F + +D WTAMIVG +G +++++F M+ P+ T +LS + +
Sbjct: 370 FVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASL 429
Query: 466 DEGREYFADMTIQHGIEPNEAHYGCMVDLLGRAGHLNEALEVIKNMPMKPNSIVWGALLG 525
G++ ++ G + + ++ + +AG++ A + + +++ W +++
Sbjct: 430 SHGKQIHGS-AVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMII 488
Query: 526 ACRVHRDAEMA-EMAAKQILE-LDPDNEAVYVLLCNIYAACNRWDNFRELRQ 575
A H AE A E+ ++E L PD ++ +++AC + RQ
Sbjct: 489 ALAQHGHAEEALELFETMLMEGLRPD----HITYVGVFSACTHAGLVNQGRQ 536
Score = 149 bits (375), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 165/341 (48%), Gaps = 41/341 (12%)
Query: 214 PTSVTIVLVLSACAKLKDLDVGKRAHRYVKE---CKIVPN-----LILENALTDMYAACG 265
P +++ +L C L V K R+ + C+++ + + L N L ++Y+ G
Sbjct: 4 PVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTG 63
Query: 266 EMGFALEIFGNIKNKDVISWTAIVTGYINRGQVDMARQYFDQMPERDYVLWTAMIDGYLR 325
A ++F + + SW +++ Y RG +D ++FDQ+P+RD V WT MI GY
Sbjct: 64 YALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKN 123
Query: 326 VNRFREALTLFREMQTSNIRPDEFTIVSILTACANLGALELGEWVKTYIDKNKVKNDIFV 385
+ ++ +A+ + +M I P +FT+ ++L + A +E G+ V ++I K ++ ++ V
Sbjct: 124 IGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSV 183
Query: 386 GNALIDMYCKCGDVEKAQRV-------------------------------FREMLRKDK 414
N+L++MY KCGD A+ V F +M +D
Sbjct: 184 SNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDI 243
Query: 415 FTWTAMIVGLAINGHGDKSLDMFSQMLRASII-PDEVTYVGVLSACTHTGMVDEGREYFA 473
TW +MI G G+ ++LD+FS+MLR S++ PD T VLSAC + + G++ +
Sbjct: 244 VTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHS 303
Query: 474 DMTIQHGIEPNEAHYGCMVDLLGRAGHLNEALEVIKNMPMK 514
+ + G + + ++ + R G + A +I+ K
Sbjct: 304 HI-VTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTK 343
Score = 143 bits (360), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 137/569 (24%), Positives = 220/569 (38%), Gaps = 136/569 (23%)
Query: 10 PSTLTQETPLISPIETCESMHQLKQIHSQTIKLGLLTNPTVQNKLVTFCCS--------- 60
P+ T T +++ + M K++HS +KLGL N +V N L+
Sbjct: 144 PTQFTL-TNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKF 202
Query: 61 ---------------------EKGDMKYACKVFRKIPRPSVCLWNTMIKGYSRIDSHKNG 99
+ G M A F ++ + WN+MI G+++
Sbjct: 203 VFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRA 262
Query: 100 VLIYLDMLK-SDVRPDNYTFPFLLKGFTRDIAVEFGKELHCHVLKFGFDSSVFVQNALIS 158
+ I+ ML+ S + PD +T +L + GK++H H++ GFD S V NALIS
Sbjct: 263 LDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALIS 322
Query: 159 TYCLCGEVDMARGIFD--------------------------------VSYKD-DVVTWN 185
Y CG V+ AR + + VS KD DVV W
Sbjct: 323 MYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWT 382
Query: 186 AMFSGYKRVKQFDETRKLFGEMERKGVLPTSVTIVLVLSACAKLKDLDVGKRAHRYVKEC 245
AM GY++ + E LF M G P S T+ +LS + L L GK+ H +
Sbjct: 383 AMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKS 442
Query: 246 KIVPNLILENALTDMYAACGEMGFALEIFGNIK-NKDVISWTAIVTGYINRGQVDMARQY 304
+ ++ + NAL MYA G + A F I+ +D +SWT+++ G +
Sbjct: 443 GEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAE----- 497
Query: 305 FDQMPERDYVLWTAMIDGYLRVNRFREALTLFREMQTSNIRPDEFTIVSILTACANLGAL 364
EAL LF M +RPD T V + +AC + G +
Sbjct: 498 --------------------------EALELFETMLMEGLRPDHITYVGVFSACTHAGLV 531
Query: 365 ELG-EWVKTYIDKNKVKNDIFVGNALIDMYCKCGDVEKAQRVFREMLRKDKFTWTAMIVG 423
G ++ D +K+ + ++D++ + G +++AQ +M
Sbjct: 532 NQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKM-------------- 577
Query: 424 LAINGHGDKSLDMFSQMLRASIIPDEVTYVGVLSACTHTGMVDEGREYFADMTIQHGIEP 483
I PD VT+ +LSAC +D G+ + + +EP
Sbjct: 578 --------------------PIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLL---LEP 614
Query: 484 -NEAHYGCMVDLLGRAGHLNEALEVIKNM 511
N Y + +L G EA ++ K+M
Sbjct: 615 ENSGAYSALANLYSACGKWEEAAKIRKSM 643
>sp|Q9FG16|PP367_ARATH Pentatricopeptide repeat-containing protein At5g06540
OS=Arabidopsis thaliana GN=PCMP-H88 PE=2 SV=1
Length = 622
Score = 497 bits (1279), Expect = e-139, Method: Compositional matrix adjust.
Identities = 236/597 (39%), Positives = 378/597 (63%), Gaps = 14/597 (2%)
Query: 135 KELHCHVLKFGFDSSVFVQNALISTYCLCGE----------VDMARGIFDVSYKDDVVTW 184
K +H +L+ S VFV + L++ LC + + A GIF ++ +
Sbjct: 29 KIIHGFLLRTHLISDVFVASRLLA---LCVDDSTFNKPTNLLGYAYGIFSQIQNPNLFVF 85
Query: 185 NAMFSGYKRVKQFDETRKLFGEMERKGVLPTSVTIVLVLSACAKLKDLDVGKRAHRYVKE 244
N + + + + + +M + + P ++T ++ A ++++ + VG++ H +
Sbjct: 86 NLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQTHSQIVR 145
Query: 245 CKIVPNLILENALTDMYAACGEMGFALEIFGNIKNKDVISWTAIVTGYINRGQVDMARQY 304
++ +EN+L MYA CG + A IFG + +DV+SWT++V GY G V+ AR+
Sbjct: 146 FGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREM 205
Query: 305 FDQMPERDYVLWTAMIDGYLRVNRFREALTLFREMQTSNIRPDEFTIVSILTACANLGAL 364
FD+MP R+ W+ MI+GY + N F +A+ LF M+ + +E +VS++++CA+LGAL
Sbjct: 206 FDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGAL 265
Query: 365 ELGEWVKTYIDKNKVKNDIFVGNALIDMYCKCGDVEKAQRVFREMLRKDKFTWTAMIVGL 424
E GE Y+ K+ + ++ +G AL+DM+ +CGD+EKA VF + D +W+++I GL
Sbjct: 266 EFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGL 325
Query: 425 AINGHGDKSLDMFSQMLRASIIPDEVTYVGVLSACTHTGMVDEGREYFADMTIQHGIEPN 484
A++GH K++ FSQM+ IP +VT+ VLSAC+H G+V++G E + +M HGIEP
Sbjct: 326 AVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPR 385
Query: 485 EAHYGCMVDLLGRAGHLNEALEVIKNMPMKPNSIVWGALLGACRVHRDAEMAEMAAKQIL 544
HYGC+VD+LGRAG L EA I M +KPN+ + GALLGAC+++++ E+AE ++
Sbjct: 386 LEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNTEVAERVGNMLI 445
Query: 545 ELDPDNEAVYVLLCNIYAACNRWDNFRELRQMILDRGIKKTPGCSMIEMNGVVHEFVAG- 603
++ P++ YVLL NIYA +WD LR M+ ++ +KK PG S+IE++G +++F G
Sbjct: 446 KVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLIEIDGKINKFTMGD 505
Query: 604 DKSHPQTKEIYLKLDEMTSDLKFVGYMPDISEVFLDVGEEDKERAVYQHSEKLAMAFGLI 663
D+ HP+ +I K +E+ ++ +GY + + F DV EE+KE +++ HSEKLA+A+G++
Sbjct: 506 DQKHPEMGKIRRKWEEILGKIRLIGYKGNTGDAFFDVDEEEKESSIHMHSEKLAIAYGMM 565
Query: 664 SSGPGVTIRIVKNLRMCVDCHRMAKLVSMVYDREVIVRDKTRFHHFKHGSCSCKDYW 720
+ PG TIRIVKNLR+C DCH + KL+S VY RE+IVRD+ RFHHF++G CSC+DYW
Sbjct: 566 KTKPGTTIRIVKNLRVCEDCHTVTKLISEVYGRELIVRDRNRFHHFRNGVCSCRDYW 622
Score = 186 bits (473), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 116/437 (26%), Positives = 207/437 (47%), Gaps = 69/437 (15%)
Query: 11 STLTQETPLISPIETCESMHQLKQIHSQTIKLGLLTNPTVQNKLVTFCCSEKGDMK---- 66
+TL + P ++ +++C S LK IH ++ L+++ V ++L+ C + K
Sbjct: 7 NTLRFKHPKLALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNL 66
Query: 67 --YACKVFRKIPRPSVCLWNTMIKGYSRIDSHKNGVLIYLDMLKSDVRPDNYTFPFLLKG 124
YA +F +I P++ ++N +I+ +S Y MLKS + PDN TFPFL+K
Sbjct: 67 LGYAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKA 126
Query: 125 FTRDIAVEFGKELHCHVLKFGFDSSVFVQNAL---------------------------- 156
+ V G++ H +++FGF + V+V+N+L
Sbjct: 127 SSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSW 186
Query: 157 ---ISTYCLCGEVDMARGIFDVSYKDDVVTWNAMFSGYKRVKQFDETRKLFGEMERKGVL 213
++ YC CG V+ AR +FD ++ TW+ M +GY + F++ LF M+R+GV+
Sbjct: 187 TSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVV 246
Query: 214 PTSVTIVLVLSACAKLKDLDVGKRAHRYVKECKIVPNLILENALTDMYAACGEMGFALEI 273
+V V+S+CA L L+ G+RA+ YV + + NLIL AL DM+ CG++ A+ +
Sbjct: 247 ANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHV 306
Query: 274 FGNIKNKDVISWTAIVTGYINRGQVDMARQYFDQMPERDYVLWTAMIDGYLRVNRFREAL 333
F + D +SW++I+ G G A YF QM ++
Sbjct: 307 FEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFI------------------- 347
Query: 334 TLFREMQTSNIRPDEFTIVSILTACANLGALELGEWVKTYIDKNK-VKNDIFVGNALIDM 392
P + T ++L+AC++ G +E G + + K+ ++ + ++DM
Sbjct: 348 ------------PRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDM 395
Query: 393 YCKCGDVEKAQRVFREM 409
+ G + +A+ +M
Sbjct: 396 LGRAGKLAEAENFILKM 412
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 496 bits (1278), Expect = e-139, Method: Compositional matrix adjust.
Identities = 261/694 (37%), Positives = 388/694 (55%), Gaps = 33/694 (4%)
Query: 28 SMHQLKQIHSQTIKLGLLTNPTVQNKLVTFCCSEKGDMKYACKVFRKIPRPSVCLWNTMI 87
S+H +Q+H +K G +V N LV F + + A KVF ++ V WN++I
Sbjct: 210 SVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQ-RVDSARKVFDEMTERDVISWNSII 268
Query: 88 KGYSRIDSHKNGVLIYLDMLKSDVRPDNYTFPFLLKGFTRDIAVEFGKELHCHVLKFGFD 147
GY + G+ +++ ML S + D T + G + G+ +H +K F
Sbjct: 269 NGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFS 328
Query: 148 SSVFVQNALISTYCLCGEVDMARGIFDVSYKDDVVTWNAMFSGYKRVKQFDETRKLFGEM 207
N L+ Y CG++D A+ +F VV++ +M +GY R E KLF EM
Sbjct: 329 REDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEM 388
Query: 208 ERKGVLPTSVTIVLVLSACAKLKDLDVGKRAHRYVKECKIVPNLILENALTDMYAACGEM 267
E +G+ P T+ VL+ CA+ + LD GKR H ++KE + ++ + NAL DMYA CG M
Sbjct: 389 EEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSM 448
Query: 268 GFALEIFGNIKNKDVISWTAIVTGYINRGQVDMARQYFDQMPERDYVLWTAMIDGYLRVN 327
A F +M +D + W +I GY +
Sbjct: 449 -------------------------------QEAELVFSEMRVKDIISWNTIIGGYSKNC 477
Query: 328 RFREALTLFREM-QTSNIRPDEFTIVSILTACANLGALELGEWVKTYIDKNKVKNDIFVG 386
EAL+LF + + PDE T+ +L ACA+L A + G + YI +N +D V
Sbjct: 478 YANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVA 537
Query: 387 NALIDMYCKCGDVEKAQRVFREMLRKDKFTWTAMIVGLAINGHGDKSLDMFSQMLRASII 446
N+L+DMY KCG + A +F ++ KD +WT MI G ++G G +++ +F+QM +A I
Sbjct: 538 NSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIE 597
Query: 447 PDEVTYVGVLSACTHTGMVDEGREYFADMTIQHGIEPNEAHYGCMVDLLGRAGHLNEALE 506
DE+++V +L AC+H+G+VDEG +F M + IEP HY C+VD+L R G L +A
Sbjct: 598 ADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYR 657
Query: 507 VIKNMPMKPNSIVWGALLGACRVHRDAEMAEMAAKQILELDPDNEAVYVLLCNIYAACNR 566
I+NMP+ P++ +WGALL CR+H D ++AE A+++ EL+P+N YVL+ NIYA +
Sbjct: 658 FIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEK 717
Query: 567 WDNFRELRQMILDRGIKKTPGCSMIEMNGVVHEFVAGDKSHPQTKEIYLKLDEMTSDLKF 626
W+ + LR+ I RG++K PGCS IE+ G V+ FVAGD S+P+T+ I L ++ + +
Sbjct: 718 WEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIE 777
Query: 627 VGYMPDISEVFLDVGEEDKERAVYQHSEKLAMAFGLISSGPGVTIRIVKNLRMCVDCHRM 686
GY P +D E +KE A+ HSEKLAMA G+ISSG G IR+ KNLR+C DCH M
Sbjct: 778 EGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEM 837
Query: 687 AKLVSMVYDREVIVRDKTRFHHFKHGSCSCKDYW 720
AK +S + RE+++RD RFH FK G CSC+ +W
Sbjct: 838 AKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871
Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 105/443 (23%), Positives = 171/443 (38%), Gaps = 88/443 (19%)
Query: 218 TIVLVLSACAKLKDLDVGKRAHRYVKECKIVPNLILENALTDMYAACGEMGFALEIFGNI 277
T+ VL CA K L GK +++ V + L + L+ MY CG++ A +F +
Sbjct: 96 TLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEV 155
Query: 278 KNKDVISWTAIVTGYINRGQVDMARQYFDQM----------------------------- 308
K + + W ++ G + F +M
Sbjct: 156 KIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGE 215
Query: 309 -----------PERDYVLWTAMIDGYLRVNRFREALTLFREMQ----------------- 340
ER+ V +++ YL+ R A +F EM
Sbjct: 216 QLHGFILKSGFGERNSV-GNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSN 274
Query: 341 --------------TSNIRPDEFTIVSILTACANLGALELGEWVKTYIDKNKVKNDIFVG 386
S I D TIVS+ CA+ + LG V + K +
Sbjct: 275 GLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFC 334
Query: 387 NALIDMYCKCGDVEKAQRVFREMLRKDKFTWTAMIVGLAINGHGDKSLDMFSQMLRASII 446
N L+DMY KCGD++ A+ VFREM + ++T+MI G A G +++ +F +M I
Sbjct: 335 NTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGIS 394
Query: 447 PDEVTYVGVLSACTHTGMVDEGREYFADMTIQHGIEPNEAHY-----GCMVDLLGRAGHL 501
PD T VL+ C ++DEG+ + I+ N+ + ++D+ + G +
Sbjct: 395 PDVYTVTAVLNCCARYRLLDEGKR------VHEWIKENDLGFDIFVSNALMDMYAKCGSM 448
Query: 502 NEALEVIKNMPMKPNSIVWGALLGACRVHRDAEMAEMAAKQILE---LDPDNEAVYVLLC 558
EA V M +K + I W ++G + A A +LE PD V +L
Sbjct: 449 QEAELVFSEMRVK-DIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVL- 506
Query: 559 NIYAACNRWDNFRELRQMILDRG 581
A+ + +D RE+ I+ G
Sbjct: 507 PACASLSAFDKGREIHGYIMRNG 529
Score = 59.3 bits (142), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 83/178 (46%), Gaps = 2/178 (1%)
Query: 347 DEFTIVSILTACANLGALELGEWVKTYIDKNKVKNDIFVGNALIDMYCKCGDVEKAQRVF 406
D T+ S+L CA+ +L+ G+ V +I N D +G+ L MY CGD+++A RVF
Sbjct: 93 DPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVF 152
Query: 407 REMLRKDKFTWTAMIVGLAINGHGDKSLDMFSQMLRASIIPDEVTYVGVLSACTHTGMVD 466
E+ + W ++ LA +G S+ +F +M+ + + D T+ V + + V
Sbjct: 153 DEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV- 211
Query: 467 EGREYFADMTIQHGIEPNEAHYGCMVDLLGRAGHLNEALEVIKNMPMKPNSIVWGALL 524
G E ++ G + +V + ++ A +V M + + I W +++
Sbjct: 212 HGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTER-DVISWNSII 268
>sp|Q9FJY7|PP449_ARATH Pentatricopeptide repeat-containing protein At5g66520
OS=Arabidopsis thaliana GN=PCMP-H61 PE=2 SV=1
Length = 620
Score = 494 bits (1271), Expect = e-138, Method: Compositional matrix adjust.
Identities = 229/591 (38%), Positives = 368/591 (62%), Gaps = 6/591 (1%)
Query: 135 KELHCHVLKFGFDSSVFVQNALISTYCLCGE----VDMARGIFDVSYKDDVVTWNAMFSG 190
K++H +LK G + +S +C+ + A+ +FD + D WN M G
Sbjct: 31 KQIHARMLKTGLMQDSYAITKFLS-FCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIRG 89
Query: 191 YKRVKQFDETRKLFGEMERKGVLPTSVTIVLVLSACAKLKDLDVGKRAHRYVKECKIVPN 250
+ + + + L+ M + T +L AC+ L + + H + + +
Sbjct: 90 FSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYEND 149
Query: 251 LILENALTDMYAACGEMGFALEIFGNIKNKDVISWTAIVTGYINRGQVDMARQYFDQMPE 310
+ N+L + YA G A +F I D +SW +++ GY+ G++D+A F +M E
Sbjct: 150 VYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAE 209
Query: 311 RDYVLWTAMIDGYLRVNRFREALTLFREMQTSNIRPDEFTIVSILTACANLGALELGEWV 370
++ + WT MI GY++ + +EAL LF EMQ S++ PD ++ + L+ACA LGALE G+W+
Sbjct: 210 KNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWI 269
Query: 371 KTYIDKNKVKNDIFVGNALIDMYCKCGDVEKAQRVFREMLRKDKFTWTAMIVGLAINGHG 430
+Y++K +++ D +G LIDMY KCG++E+A VF+ + +K WTA+I G A +GHG
Sbjct: 270 HSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHG 329
Query: 431 DKSLDMFSQMLRASIIPDEVTYVGVLSACTHTGMVDEGREYFADMTIQHGIEPNEAHYGC 490
+++ F +M + I P+ +T+ VL+AC++TG+V+EG+ F M + ++P HYGC
Sbjct: 330 REAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGC 389
Query: 491 MVDLLGRAGHLNEALEVIKNMPMKPNSIVWGALLGACRVHRDAEMAEMAAKQILELDPDN 550
+VDLLGRAG L+EA I+ MP+KPN+++WGALL ACR+H++ E+ E + ++ +DP +
Sbjct: 390 IVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAIDPYH 449
Query: 551 EAVYVLLCNIYAACNRWDNFRELRQMILDRGIKKTPGCSMIEMNGVVHEFVAGDKSHPQT 610
YV NI+A +WD E R+++ ++G+ K PGCS I + G HEF+AGD+SHP+
Sbjct: 450 GGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGDRSHPEI 509
Query: 611 KEIYLKLDEMTSDLKFVGYMPDISEVFLD-VGEEDKERAVYQHSEKLAMAFGLISSGPGV 669
++I K M L+ GY+P++ E+ LD V ++++E V+QHSEKLA+ +GLI + PG
Sbjct: 510 EKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVHQHSEKLAITYGLIKTKPGT 569
Query: 670 TIRIVKNLRMCVDCHRMAKLVSMVYDREVIVRDKTRFHHFKHGSCSCKDYW 720
IRI+KNLR+C DCH++ KL+S +Y R++++RD+TRFHHF+ G CSC DYW
Sbjct: 570 IIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDGKCSCGDYW 620
Score = 220 bits (560), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 135/443 (30%), Positives = 219/443 (49%), Gaps = 66/443 (14%)
Query: 20 ISPIETCESMHQLKQIHSQTIKLGLLTNPTVQNKLVTFCCSEKGD--MKYACKVFRKIPR 77
+S ++ C +LKQIH++ +K GL+ + K ++FC S + YA VF R
Sbjct: 18 MSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDR 77
Query: 78 PSVCLWNTMIKGYSRIDSHKNGVLIYLDMLKSDVRPDNYTFPFLLKGFTRDIAVEFGKEL 137
P LWN MI+G+S D + +L+Y ML S + YTFP LLK + A E ++
Sbjct: 78 PDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQI 137
Query: 138 HCHVLKFGFDSSVFVQNALISTYCLCGEVDMARGIFDVSYKDDVVTWNAMFSGYKRVKQF 197
H + K G+++ V+ N+LI++Y + G +A +FD + D V+WN++ GY + +
Sbjct: 138 HAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKM 197
Query: 198 D-------------------------------ETRKLFGEMERKGVLPTSVTIVLVLSAC 226
D E +LF EM+ V P +V++ LSAC
Sbjct: 198 DIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSAC 257
Query: 227 AKLKDLDVGKRAHRYVKECKIVPNLILENALTDMYAACGEMGFALEIFGNIKNKDVISWT 286
A+L L+ GK H Y+ + +I + +L L DMYA CGEM ALE+F NIK K V +WT
Sbjct: 258 AQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWT 317
Query: 287 AIVTGYINRGQVDMARQYFDQMPERDYVLWTAMIDGYLRVNRFREALTLFREMQTSNIRP 346
A+++GY G REA++ F EMQ I+P
Sbjct: 318 ALISGYAYHGH-------------------------------GREAISKFMEMQKMGIKP 346
Query: 347 DEFTIVSILTACANLGALELGEWVKTYIDKN-KVKNDIFVGNALIDMYCKCGDVEKAQRV 405
+ T ++LTAC+ G +E G+ + ++++ +K I ++D+ + G +++A+R
Sbjct: 347 NVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRF 406
Query: 406 FREM-LRKDKFTWTAMIVGLAIN 427
+EM L+ + W A++ I+
Sbjct: 407 IQEMPLKPNAVIWGALLKACRIH 429
Score = 97.1 bits (240), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 106/259 (40%), Gaps = 30/259 (11%)
Query: 8 SPPSTLTQETPLISPIETCESMHQLKQIHSQTIKLGLLTNPTVQNKLV-TFCCS------ 60
S P L+ + + QIH+Q KLG + N L+ ++ +
Sbjct: 110 SAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLA 169
Query: 61 -----------------------EKGDMKYACKVFRKIPRPSVCLWNTMIKGYSRIDSHK 97
+ G M A +FRK+ + W TMI GY + D +K
Sbjct: 170 HLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNK 229
Query: 98 NGVLIYLDMLKSDVRPDNYTFPFLLKGFTRDIAVEFGKELHCHVLKFGFDSSVFVQNALI 157
+ ++ +M SDV PDN + L + A+E GK +H ++ K + LI
Sbjct: 230 EALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLI 289
Query: 158 STYCLCGEVDMARGIFDVSYKDDVVTWNAMFSGYKRVKQFDETRKLFGEMERKGVLPTSV 217
Y CGE++ A +F K V W A+ SGY E F EM++ G+ P +
Sbjct: 290 DMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVI 349
Query: 218 TIVLVLSACAKLKDLDVGK 236
T VL+AC+ ++ GK
Sbjct: 350 TFTAVLTACSYTGLVEEGK 368
>sp|A8MQA3|PP330_ARATH Pentatricopeptide repeat-containing protein At4g21065
OS=Arabidopsis thaliana GN=PCMP-H28 PE=2 SV=2
Length = 595
Score = 494 bits (1271), Expect = e-138, Method: Compositional matrix adjust.
Identities = 238/543 (43%), Positives = 348/543 (64%), Gaps = 33/543 (6%)
Query: 180 DVVTWNAMFSGYKRVKQFDETRKLFGEMERKGVL-PTSVTIVLVLSACAKLKDLDVGKRA 238
+V WN + GY + L+ EM G++ P + T ++ A + D+ +G+
Sbjct: 84 NVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETI 143
Query: 239 HRYVKECKIVPNLILENALTDMYAACGEMGFALEIFGNIKNKDVISWTAIVTGYINRGQV 298
H V + ++N+L +YA CG++ A ++
Sbjct: 144 HSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKV------------------------- 178
Query: 299 DMARQYFDQMPERDYVLWTAMIDGYLRVNRFREALTLFREMQTSNIRPDEFTIVSILTAC 358
FD+MPE+D V W ++I+G+ + EAL L+ EM + I+PD FTIVS+L+AC
Sbjct: 179 ------FDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSAC 232
Query: 359 ANLGALELGEWVKTYIDKNKVKNDIFVGNALIDMYCKCGDVEKAQRVFREMLRKDKFTWT 418
A +GAL LG+ V Y+ K + ++ N L+D+Y +CG VE+A+ +F EM+ K+ +WT
Sbjct: 233 AKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWT 292
Query: 419 AMIVGLAINGHGDKSLDMFSQMLRA-SIIPDEVTYVGVLSACTHTGMVDEGREYFADMTI 477
++IVGLA+NG G +++++F M ++P E+T+VG+L AC+H GMV EG EYF M
Sbjct: 293 SLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMRE 352
Query: 478 QHGIEPNEAHYGCMVDLLGRAGHLNEALEVIKNMPMKPNSIVWGALLGACRVHRDAEMAE 537
++ IEP H+GCMVDLL RAG + +A E IK+MPM+PN ++W LLGAC VH D+++AE
Sbjct: 353 EYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAE 412
Query: 538 MAAKQILELDPDNEAVYVLLCNIYAACNRWDNFRELRQMILDRGIKKTPGCSMIEMNGVV 597
A QIL+L+P++ YVLL N+YA+ RW + +++R+ +L G+KK PG S++E+ V
Sbjct: 413 FARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRV 472
Query: 598 HEFVAGDKSHPQTKEIYLKLDEMTSDLKFVGYMPDISEVFLDVGEEDKERAVYQHSEKLA 657
HEF+ GDKSHPQ+ IY KL EMT L+ GY+P IS V++DV EE+KE AV HSEK+A
Sbjct: 473 HEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIA 532
Query: 658 MAFGLISSGPGVTIRIVKNLRMCVDCHRMAKLVSMVYDREVIVRDKTRFHHFKHGSCSCK 717
+AF LIS+ I +VKNLR+C DCH KLVS VY+RE++VRD++RFHHFK+GSCSC+
Sbjct: 533 IAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQ 592
Query: 718 DYW 720
DYW
Sbjct: 593 DYW 595
Score = 216 bits (550), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 140/457 (30%), Positives = 239/457 (52%), Gaps = 53/457 (11%)
Query: 11 STLTQETPLISP-IETC---------ESMHQLKQIHSQTIKLGL-LTNPTVQNKLVTFCC 59
S ++ + L+ P +E C S+ +L+QIH+ +I+ G+ +++ + L+ +
Sbjct: 2 SPFSETSVLLLPMVEKCINLLQTYGVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLV 61
Query: 60 S--EKGDMKYACKVFRKIPRP-SVCLWNTMIKGYSRIDSHKNGVLIYLDMLKSD-VRPDN 115
S M YA KVF KI +P +V +WNT+I+GY+ I + + +Y +M S V PD
Sbjct: 62 SLPSPPPMSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDT 121
Query: 116 YTFPFLLKGFTRDIAVEFGKELHCHVLKFGFDSSVFVQNALISTYCLCGEVDMARGIFDV 175
+T+PFL+K T V G+ +H V++ GF S ++VQN+L+ Y CG+V A +FD
Sbjct: 122 HTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDK 181
Query: 176 SYKDDVVTWNAMFSGYKRVKQFDETRKLFGEMERKGVLPTSVTIVLVLSACAKLKDLDVG 235
+ D+V WN++ +G+ + +E L+ EM KG+ P TIV +LSACAK+ L +G
Sbjct: 182 MPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLG 241
Query: 236 KRAHRYVKECKIVPNLILENALTDMYAACGEMGFALEIFGNIKNKDVISWTAIVTGYINR 295
KR H Y+ + + NL N L D+YA CG + A +F + +K+ +SWT+++ G
Sbjct: 242 KRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVG---- 297
Query: 296 GQVDMARQYFDQMPERDYVLWTAMIDGYLRVNRF-REALTLFREMQ-TSNIRPDEFTIVS 353
L VN F +EA+ LF+ M+ T + P E T V
Sbjct: 298 ----------------------------LAVNGFGKEAIELFKYMESTEGLLPCEITFVG 329
Query: 354 ILTACANLGALELG-EWVKTYIDKNKVKNDIFVGNALIDMYCKCGDVEKAQRVFREM-LR 411
IL AC++ G ++ G E+ + ++ K++ I ++D+ + G V+KA + M ++
Sbjct: 330 ILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQ 389
Query: 412 KDKFTWTAMIVGLAINGHGDKSLDMFSQMLRASIIPD 448
+ W ++ + HGD L F+++ + P+
Sbjct: 390 PNVVIWRTLLGACTV--HGDSDLAEFARIQILQLEPN 424
Score = 118 bits (295), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 159/350 (45%), Gaps = 14/350 (4%)
Query: 5 SSISPPSTLTQETPLISPIETCESMHQLKQIHSQTIKLGLLTNPTVQNKLVTFCCSEKGD 64
S + P T T LI + T + + IHS I+ G + VQN L+ + GD
Sbjct: 114 SGLVEPDTHTYPF-LIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLY-ANCGD 171
Query: 65 MKYACKVFRKIPRPSVCLWNTMIKGYSRIDSHKNGVLIYLDMLKSDVRPDNYTFPFLLKG 124
+ A KVF K+P + WN++I G++ + + +Y +M ++PD +T LL
Sbjct: 172 VASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSA 231
Query: 125 FTRDIAVEFGKELHCHVLKFGFDSSVFVQNALISTYCLCGEVDMARGIFDVSYKDDVVTW 184
+ A+ GK +H +++K G ++ N L+ Y CG V+ A+ +FD + V+W
Sbjct: 232 CAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSW 291
Query: 185 NAMFSGYKRVKQFDETRKLFGEMER-KGVLPTSVTIVLVLSACAKLKDLDVGKRAHRYVK 243
++ G E +LF ME +G+LP +T V +L AC+ + G R ++
Sbjct: 292 TSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMR 351
Query: 244 -ECKIVPNLILENALTDMYAACGEMGFALEIFGNIK-NKDVISWTAIVTGYINRGQVDMA 301
E KI P + + D+ A G++ A E ++ +V+ W ++ G D+A
Sbjct: 352 EEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLA 411
Query: 302 R----QYFDQMPER--DYVLWTAMIDGYLRVNRFREALTLFREMQTSNIR 345
Q P DYVL + M Y R+ + + ++M ++
Sbjct: 412 EFARIQILQLEPNHSGDYVLLSNM---YASEQRWSDVQKIRKQMLRDGVK 458
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 494 bits (1271), Expect = e-138, Method: Compositional matrix adjust.
Identities = 253/688 (36%), Positives = 396/688 (57%), Gaps = 33/688 (4%)
Query: 33 KQIHSQTIKLGLLTNPTVQNKLVTFCCSEKGDMKYACKVFRKIPRPSVCLWNTMIKGYSR 92
K+IH +K G + L + + A KVF ++P + WNT++ GYS+
Sbjct: 155 KEIHGLLVKSGFSLDLFAMTGLENMYAKCR-QVNEARKVFDRMPERDLVSWNTIVAGYSQ 213
Query: 93 IDSHKNGVLIYLDMLKSDVRPDNYTFPFLLKGFTRDIAVEFGKELHCHVLKFGFDSSVFV 152
+ + + M + +++P T +L + + GKE+H + ++ GFDS V +
Sbjct: 214 NGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNI 273
Query: 153 QNALISTYCLCGEVDMARGIFDVSYKDDVVTWNAMFSGYKRVKQFDETRKLFGEMERKGV 212
AL+ Y CG ++ AR +FD + +VV+WN+M Y + + E +F +M +GV
Sbjct: 274 STALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGV 333
Query: 213 LPTSVTIVLVLSACAKLKDLDVGKRAHRYVKECKIVPNLILENALTDMYAACGEMGFALE 272
PT V+++ L ACA L DL+ G+ H+ E + N+ + N+L MY C E
Sbjct: 334 KPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKE------ 387
Query: 273 IFGNIKNKDVISWTAIVTGYINRGQVDMARQYFDQMPERDYVLWTAMIDGYLRVNRFREA 332
VD A F ++ R V W AMI G+ + R +A
Sbjct: 388 -------------------------VDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDA 422
Query: 333 LTLFREMQTSNIRPDEFTIVSILTACANLGALELGEWVKTYIDKNKVKNDIFVGNALIDM 392
L F +M++ ++PD FT VS++TA A L +W+ + ++ + ++FV AL+DM
Sbjct: 423 LNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDM 482
Query: 393 YCKCGDVEKAQRVFREMLRKDKFTWTAMIVGLAINGHGDKSLDMFSQMLRASIIPDEVTY 452
Y KCG + A+ +F M + TW AMI G +G G +L++F +M + +I P+ VT+
Sbjct: 483 YAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTF 542
Query: 453 VGVLSACTHTGMVDEGREYFADMTIQHGIEPNEAHYGCMVDLLGRAGHLNEALEVIKNMP 512
+ V+SAC+H+G+V+ G + F M + IE + HYG MVDLLGRAG LNEA + I MP
Sbjct: 543 LSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMP 602
Query: 513 MKPNSIVWGALLGACRVHRDAEMAEMAAKQILELDPDNEAVYVLLCNIYAACNRWDNFRE 572
+KP V+GA+LGAC++H++ AE AA+++ EL+PD+ +VLL NIY A + W+ +
Sbjct: 603 VKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQ 662
Query: 573 LRQMILDRGIKKTPGCSMIEMNGVVHEFVAGDKSHPQTKEIYLKLDEMTSDLKFVGYMPD 632
+R +L +G++KTPGCSM+E+ VH F +G +HP +K+IY L+++ +K GY+PD
Sbjct: 663 VRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPD 722
Query: 633 ISEVFLDVGEEDKERAVYQHSEKLAMAFGLISSGPGVTIRIVKNLRMCVDCHRMAKLVSM 692
+ + L V + KE+ + HSEKLA++FGL+++ G TI + KNLR+C DCH K +S+
Sbjct: 723 -TNLVLGVENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISL 781
Query: 693 VYDREVIVRDKTRFHHFKHGSCSCKDYW 720
V RE++VRD RFHHFK+G+CSC DYW
Sbjct: 782 VTGREIVVRDMQRFHHFKNGACSCGDYW 809
>sp|Q9FFG8|PP417_ARATH Pentatricopeptide repeat-containing protein At5g44230
OS=Arabidopsis thaliana GN=PCMP-H17 PE=2 SV=1
Length = 657
Score = 489 bits (1259), Expect = e-137, Method: Compositional matrix adjust.
Identities = 240/593 (40%), Positives = 365/593 (61%), Gaps = 8/593 (1%)
Query: 135 KELHCHVLKFGFDSSVFVQNALISTYCLCGEVDM---ARGIFDVSYKDDVVTWNAMFSGY 191
K++H HVL+ G D S ++ LI T G V M AR + + + W A+ GY
Sbjct: 66 KQIHGHVLRKGLDQSCYILTKLIRTLTKLG-VPMDPYARRVIEPVQFRNPFLWTAVIRGY 124
Query: 192 KRVKQFDETRKLFGEMERKGVLPTSVTIVLVLSACAKLKDLDVGKRAHRYVKECKIVPNL 251
+FDE ++G M ++ + P S T +L AC +KDL++G++ H + +
Sbjct: 125 AIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCFV 184
Query: 252 ILENALTDMYAACGEMGFALEIFGNIKNKDVISWTAIVTGYINRGQVDMARQYFDQMPER 311
+ N + DMY C + A ++F + +DVISWT ++ Y G ++ A + F+ +P +
Sbjct: 185 YVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTK 244
Query: 312 DYVLWTAMIDGYLRVNRFREALTLFREMQTSNIRPDEFTIVSILTACANLGALELGEWVK 371
D V WTAM+ G+ + + +EAL F M+ S IR DE T+ ++ACA LGA + +
Sbjct: 245 DMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAV 304
Query: 372 TYIDKN--KVKNDIFVGNALIDMYCKCGDVEKAQRVFREMLRKDKFTWTAMIVGLAINGH 429
K+ + + +G+ALIDMY KCG+VE+A VF M K+ FT+++MI+GLA +G
Sbjct: 305 QIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGR 364
Query: 430 GDKSLDMFSQML-RASIIPDEVTYVGVLSACTHTGMVDEGREYFADMTIQHGIEPNEAHY 488
++L +F M+ + I P+ VT+VG L AC+H+G+VD+GR+ F M G++P HY
Sbjct: 365 AQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHY 424
Query: 489 GCMVDLLGRAGHLNEALEVIKNMPMKPNSIVWGALLGACRVHRDAEMAEMAAKQILELDP 548
CMVDLLGR G L EALE+IK M ++P+ VWGALLGACR+H + E+AE+AA+ + EL+P
Sbjct: 425 TCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAAEHLFELEP 484
Query: 549 DNEAVYVLLCNIYAACNRWDNFRELRQMILDRGIKKTPGCS-MIEMNGVVHEFVAGDKSH 607
D Y+LL N+YA+ W +R++I ++G+KKTP S +++ NG +H+F G+ +H
Sbjct: 485 DIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVVDKNGQMHKFFPGNLNH 544
Query: 608 PQTKEIYLKLDEMTSDLKFVGYMPDISEVFLDVGEEDKERAVYQHSEKLAMAFGLISSGP 667
P + +I KL+E+ L +GY PD+S V DV + K + QH+EKLA+AF L+++
Sbjct: 545 PMSNKIQDKLEELVERLTVLGYQPDLSSVPYDVSDNAKRLILIQHTEKLALAFSLLTTNR 604
Query: 668 GVTIRIVKNLRMCVDCHRMAKLVSMVYDREVIVRDKTRFHHFKHGSCSCKDYW 720
TI I+KNLRMC+DCH+ +L S V + +I+RD RFHHF+ G CSC D+W
Sbjct: 605 DSTITIMKNLRMCLDCHKFMRLASEVTGKVIIMRDNMRFHHFRSGDCSCGDFW 657
Score = 142 bits (359), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 116/484 (23%), Positives = 208/484 (42%), Gaps = 88/484 (18%)
Query: 17 TPLISPIETCESMHQLKQIHSQTIKLGLLTNPTVQNKLVTFCCSEKGDM-KYACKVFRKI 75
+ LIS ++ C +++Q+KQIH ++ GL + + KL+ M YA +V +
Sbjct: 50 SSLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPV 109
Query: 76 PRPSVCLWNTMIKGYSRIDSHKNGVLIYLDMLKSDVRPDNYTFPFLLKGFTRDIAVEFGK 135
+ LW +I+GY+ + +Y M K ++ P ++TF LLK + G+
Sbjct: 110 QFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGR 169
Query: 136 ELHCHVLKFGFDSSVFVQNALISTYCLCGEVDMARGIFDVSYKDDVVTWNAMFSGYKRVK 195
+ H + V+V N +I Y C +D AR +FD + DV++W + + Y RV
Sbjct: 170 QFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVG 229
Query: 196 QFD-------------------------------ETRKLFGEMERKGVLPTSVTIVLVLS 224
+ E + F ME+ G+ VT+ +S
Sbjct: 230 NMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYIS 289
Query: 225 ACAKLKDLDVGKRAHRYVKECKIVPN--LILENALTDMYAACGEMGFALEIFGNIKNKDV 282
ACA+L RA + ++ P+ +++ +AL DMY+ CG + A+ +F ++ NK+V
Sbjct: 290 ACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNV 349
Query: 283 ISWTAIVTGYINRGQ------------------------------------VDMARQYFD 306
++++++ G G+ VD RQ FD
Sbjct: 350 FTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFD 409
Query: 307 QM-------PERDYVLWTAMIDGYLRVNRFREALTLFREMQTSNIRPDEFTIVSILTACA 359
M P RD+ +T M+D R R +EAL L + M ++ P ++L AC
Sbjct: 410 SMYQTFGVQPTRDH--YTCMVDLLGRTGRLQEALELIKTM---SVEPHGGVWGALLGACR 464
Query: 360 NLGALELGEWVKTYIDKNKVKNDIFVGNALI--DMYCKCGDVEKAQRVFREMLRKDKFTW 417
E+ E ++ +++ DI +GN ++ ++Y GD RV R+++++
Sbjct: 465 IHNNPEIAEIAAEHL--FELEPDI-IGNYILLSNVYASAGDWGGVLRV-RKLIKEKGLKK 520
Query: 418 TAMI 421
T +
Sbjct: 521 TPAV 524
>sp|Q9FI80|PP425_ARATH Pentatricopeptide repeat-containing protein At5g48910
OS=Arabidopsis thaliana GN=PCMP-H38 PE=2 SV=1
Length = 646
Score = 488 bits (1256), Expect = e-137, Method: Compositional matrix adjust.
Identities = 245/576 (42%), Positives = 353/576 (61%), Gaps = 23/576 (3%)
Query: 165 EVDMARGIFDVSYKDDVVTWNAMFSGYKRVKQFDETRKL------FGEMERKGVLPTSVT 218
++D A IF+ + + +WN + G+ + DE + L + M + V P T
Sbjct: 74 DLDYAHKIFNQMPQRNCFSWNTIIRGFS---ESDEDKALIAITLFYEMMSDEFVEPNRFT 130
Query: 219 IVLVLSACAKLKDLDVGKRAHRYVKECKIVPNLILENALTDMYAACGEMGFALEIF-GNI 277
VL ACAK + GK+ H + + + + L MY CG M A +F NI
Sbjct: 131 FPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNI 190
Query: 278 KNKD-------------VISWTAIVTGYINRGQVDMARQYFDQMPERDYVLWTAMIDGYL 324
KD ++ W ++ GY+ G AR FD+M +R V W MI GY
Sbjct: 191 IEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYS 250
Query: 325 RVNRFREALTLFREMQTSNIRPDEFTIVSILTACANLGALELGEWVKTYIDKNKVKNDIF 384
F++A+ +FREM+ +IRP+ T+VS+L A + LG+LELGEW+ Y + + ++ D
Sbjct: 251 LNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDV 310
Query: 385 VGNALIDMYCKCGDVEKAQRVFREMLRKDKFTWTAMIVGLAINGHGDKSLDMFSQMLRAS 444
+G+ALIDMY KCG +EKA VF + R++ TW+AMI G AI+G ++D F +M +A
Sbjct: 311 LGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAG 370
Query: 445 IIPDEVTYVGVLSACTHTGMVDEGREYFADMTIQHGIEPNEAHYGCMVDLLGRAGHLNEA 504
+ P +V Y+ +L+AC+H G+V+EGR YF+ M G+EP HYGCMVDLLGR+G L+EA
Sbjct: 371 VRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEA 430
Query: 505 LEVIKNMPMKPNSIVWGALLGACRVHRDAEMAEMAAKQILELDPDNEAVYVLLCNIYAAC 564
E I NMP+KP+ ++W ALLGACR+ + EM + A ++++ P + YV L N+YA+
Sbjct: 431 EEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQ 490
Query: 565 NRWDNFRELRQMILDRGIKKTPGCSMIEMNGVVHEFVAGDKSHPQTKEIYLKLDEMTSDL 624
W E+R + ++ I+K PGCS+I+++GV+HEFV D SHP+ KEI L E++ L
Sbjct: 491 GNWSEVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKL 550
Query: 625 KFVGYMPDISEVFLDVGEEDKERAVYQHSEKLAMAFGLISSGPGVTIRIVKNLRMCVDCH 684
+ GY P ++V L++ EEDKE ++ HSEK+A AFGLIS+ PG IRIVKNLR+C DCH
Sbjct: 551 RLAGYRPITTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCH 610
Query: 685 RMAKLVSMVYDREVIVRDKTRFHHFKHGSCSCKDYW 720
KL+S VY R++ VRD+ RFHHF+ GSCSC DYW
Sbjct: 611 SSIKLISKVYKRKITVRDRKRFHHFQDGSCSCMDYW 646
Score = 179 bits (455), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 117/464 (25%), Positives = 217/464 (46%), Gaps = 84/464 (18%)
Query: 19 LISPIETCESMHQLKQIHSQTIKLGLLTNPTVQNKLVTFCCS---EKGDMKYACKVFRKI 75
L I C ++ L QIH+ IK G + + +++ FC + D+ YA K+F ++
Sbjct: 26 LFPQINNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQM 85
Query: 76 PRPSVCLWNTMIKGYSRIDSHKN--GVLIYLDMLKSD-VRPDNYTFPFLLKGFTRDIAVE 132
P+ + WNT+I+G+S D K + ++ +M+ + V P+ +TFP +LK + ++
Sbjct: 86 PQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQ 145
Query: 133 FGKELHCHVLKFGFDSSVFVQNALISTYCLCG--------------EVDM---------- 168
GK++H LK+GF FV + L+ Y +CG E DM
Sbjct: 146 EGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRD 205
Query: 169 ---------------------ARGIFDVSYKDDVVTWNAMFSGYKRVKQFDETRKLFGEM 207
AR +FD + VV+WN M SGY F + ++F EM
Sbjct: 206 GEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREM 265
Query: 208 ERKGVLPTSVTIVLVLSACAKLKDLDVGKRAHRYVKECKIVPNLILENALTDMYAACGEM 267
++ + P VT+V VL A ++L L++G+ H Y ++ I + +L +AL DMY+ CG +
Sbjct: 266 KKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGII 325
Query: 268 GFALEIFGNIKNKDVISWTAIVTGYINRGQVDMARQYFDQMPERDYVLWTAMIDGYLRVN 327
A+ +F + ++VI+W+A++ G+ GQ
Sbjct: 326 EKAIHVFERLPRENVITWSAMINGFAIHGQAG---------------------------- 357
Query: 328 RFREALTLFREMQTSNIRPDEFTIVSILTACANLGALELG-EWVKTYIDKNKVKNDIFVG 386
+A+ F +M+ + +RP + +++LTAC++ G +E G + + + ++ I
Sbjct: 358 ---DAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHY 414
Query: 387 NALIDMYCKCGDVEKAQRVFREM-LRKDKFTWTAMIVGLAINGH 429
++D+ + G +++A+ M ++ D W A++ + G+
Sbjct: 415 GCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGN 458
Score = 114 bits (284), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 143/292 (48%), Gaps = 9/292 (3%)
Query: 63 GDMKYACKVFRKIPRPSVCLWNTMIKGYSRIDSHKNGVLIYLDMLKSDVRPDNYTFPFLL 122
GD K A +F K+ + SV WNTMI GYS K+ V ++ +M K D+RP+ T +L
Sbjct: 222 GDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVL 281
Query: 123 KGFTRDIAVEFGKELHCHVLKFGFDSSVFVQNALISTYCLCGEVDMARGIFDVSYKDDVV 182
+R ++E G+ LH + G + +ALI Y CG ++ A +F+ +++V+
Sbjct: 282 PAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVI 341
Query: 183 TWNAMFSGYKRVKQFDETRKLFGEMERKGVLPTSVTIVLVLSACAKLKDLDVGKRA-HRY 241
TW+AM +G+ Q + F +M + GV P+ V + +L+AC+ ++ G+R +
Sbjct: 342 TWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQM 401
Query: 242 VKECKIVPNLILENALTDMYAACGEMGFALEIFGN--IKNKDVISWTAIVTGYINRGQVD 299
V + P + + D+ G + A E N IK DVI W A++ +G V+
Sbjct: 402 VSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVI-WKALLGACRMQGNVE 460
Query: 300 MARQ----YFDQMPERDYVLWTAMIDGYLRVNRFREALTLFREMQTSNIRPD 347
M ++ D +P D + A+ + Y + E + M+ +IR D
Sbjct: 461 MGKRVANILMDMVPH-DSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKD 511
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 486 bits (1251), Expect = e-136, Method: Compositional matrix adjust.
Identities = 265/691 (38%), Positives = 390/691 (56%), Gaps = 51/691 (7%)
Query: 63 GDMKYACKVFRKIPRPSVCLWNTMIKGYSRIDSHKNGVLIYLDMLKSDVRPDNYTFPFLL 122
G+ + A K+F ++P + WN MIKGY R + ++ M + DV ++ +L
Sbjct: 109 GEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDV----CSWNTML 164
Query: 123 KGFTRDIAVE-----FGKELHCHVLKFGFDSSVFVQN----------------ALISTYC 161
G+ ++ V+ F + + + + S +VQN AL+S C
Sbjct: 165 SGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNC 224
Query: 162 LCG------EVDMARGIFDVSYKDDVVTWNAMFSGYKRVKQFDETRKLFGEMERKGVLPT 215
L G ++ AR FD DVV+WN + +GY + + DE R+LF E + V
Sbjct: 225 LLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTW 284
Query: 216 SVTIVLVLSACAKLKDLDVGKRAHRYVKECKIV------PNLILENALTDMYAACGEMGF 269
+ + G +R V+E + + N + NA+ Y M
Sbjct: 285 TAMVS--------------GYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEM 330
Query: 270 ALEIFGNIKNKDVISWTAIVTGYINRGQVDMARQYFDQMPERDYVLWTAMIDGYLRVNRF 329
A E+F + ++V +W ++TGY G++ A+ FD+MP+RD V W AMI GY +
Sbjct: 331 AKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHS 390
Query: 330 REALTLFREMQTSNIRPDEFTIVSILTACANLGALELGEWVKTYIDKNKVKNDIFVGNAL 389
EAL LF +M+ R + + S L+ CA++ ALELG+ + + K + FVGNAL
Sbjct: 391 FEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNAL 450
Query: 390 IDMYCKCGDVEKAQRVFREMLRKDKFTWTAMIVGLAINGHGDKSLDMFSQMLRASIIPDE 449
+ MYCKCG +E+A +F+EM KD +W MI G + +G G+ +L F M R + PD+
Sbjct: 451 LLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDD 510
Query: 450 VTYVGVLSACTHTGMVDEGREYFADMTIQHGIEPNEAHYGCMVDLLGRAGHLNEALEVIK 509
T V VLSAC+HTG+VD+GR+YF MT +G+ PN HY CMVDLLGRAG L +A ++K
Sbjct: 511 ATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMK 570
Query: 510 NMPMKPNSIVWGALLGACRVHRDAEMAEMAAKQILELDPDNEAVYVLLCNIYAACNRWDN 569
NMP +P++ +WG LLGA RVH + E+AE AA +I ++P+N +YVLL N+YA+ RW +
Sbjct: 571 NMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGD 630
Query: 570 FRELRQMILDRGIKKTPGCSMIEMNGVVHEFVAGDKSHPQTKEIYLKLDEMTSDLKFVGY 629
+LR + D+G+KK PG S IE+ H F GD+ HP+ EI+ L+E+ +K GY
Sbjct: 631 VGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGY 690
Query: 630 MPDISEVFLDVGEEDKERAVYQHSEKLAMAFGLISSGPGVTIRIVKNLRMCVDCHRMAKL 689
+ S V DV EE+KER V HSE+LA+A+G++ G IR++KNLR+C DCH K
Sbjct: 691 VSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKY 750
Query: 690 VSMVYDREVIVRDKTRFHHFKHGSCSCKDYW 720
++ + R +I+RD RFHHFK GSCSC DYW
Sbjct: 751 MARITGRLIILRDNNRFHHFKDGSCSCGDYW 781
Score = 148 bits (374), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 108/411 (26%), Positives = 185/411 (45%), Gaps = 43/411 (10%)
Query: 154 NALISTYCLCGEVDMARGIFDVSYKDDVVTWNAMFSGYKRVKQFDETRKLFGEMERKGVL 213
N +IS Y GE ++AR +FD + D+V+WN M GY R + + R+LF M + V
Sbjct: 99 NGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVC 158
Query: 214 PTSVTIV------------LVLSACAKLKDLDVGKRAHRYVKECKIVP-----------N 250
+ + V + D+ YV+ K+
Sbjct: 159 SWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWA 218
Query: 251 LILENALTDMYAACGEMGFALEIFGNIKNKDVISWTAIVTGYINRGQVDMARQYFDQMPE 310
L+ N L + ++ A + F ++ +DV+SW I+TGY G++D ARQ FD+ P
Sbjct: 219 LVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPV 278
Query: 311 RDYVLWTAMIDGYLRVNRFREALTLFREMQTSNIRPDEFTIVSILTACANLGALELGEWV 370
+D WTAM+ GY++ EA LF +M N E + ++L +E+
Sbjct: 279 QDVFTWTAMVSGYIQNRMVEEARELFDKMPERN----EVSWNAMLAGYVQGERMEM---A 331
Query: 371 KTYIDKNKVKNDIFVGNALIDMYCKCGDVEKAQRVFREMLRKDKFTWTAMIVGLAINGHG 430
K D +N + N +I Y +CG + +A+ +F +M ++D +W AMI G + +GH
Sbjct: 332 KELFDVMPCRN-VSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHS 390
Query: 431 DKSLDMFSQMLRASIIPDEVTYVGVLSACTHTGMVDEGREYFADMTIQHGIEPNEAHYGC 490
++L +F QM R + ++ LS C ++ G++ + ++ G E GC
Sbjct: 391 FEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRL-VKGGYET-----GC 444
Query: 491 MVD-----LLGRAGHLNEALEVIKNMPMKPNSIVWGALLGACRVHRDAEMA 536
V + + G + EA ++ K M K + + W ++ H E+A
Sbjct: 445 FVGNALLLMYCKCGSIEEANDLFKEMAGK-DIVSWNTMIAGYSRHGFGEVA 494
Score = 101 bits (251), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 149/333 (44%), Gaps = 27/333 (8%)
Query: 255 NALTDMYAACGEMGFALEIFGNIKNKDVISWTAIVTGYINRGQVDMARQYFDQMPERDYV 314
N Y G AL +F + +S+ +++GY+ G+ ++AR+ FD+MPERD V
Sbjct: 68 NVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLV 127
Query: 315 LWTAMIDGYLRVNRFREALTLFREMQTSNIRPDEFTIVSILTACANLGALELGEWVKTYI 374
W MI GY+R +A LF M ++ + ++L+ A G ++ ++
Sbjct: 128 SWNVMIKGYVRNRNLGKARELFEIMPERDV----CSWNTMLSGYAQNGCVDD---ARSVF 180
Query: 375 DKNKVKNDIFVGNALIDMYCKCGDVEKAQRVFREMLRKDKFTWTAMIVGLAINGHGDKSL 434
D+ KND+ NAL+ Y + +E+A +F+ +W ++ G K +
Sbjct: 181 DRMPEKNDV-SWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFV----KKKKI 235
Query: 435 DMFSQMLRASIIPDEVTYVGVLSACTHTGMVDEGREYFADMTIQHGIEPNEAHYGCMVDL 494
Q + + D V++ +++ +G +DE R+ F + +Q + MV
Sbjct: 236 VEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFT-----WTAMVSG 290
Query: 495 LGRAGHLNEALEVIKNMPMKPNSIVWGALLGACRVHRDAEMAEMAAKQILELDP-DNEAV 553
+ + EA E+ MP + N + W A+L + E EM AK++ ++ P N +
Sbjct: 291 YIQNRMVEEARELFDKMPER-NEVSWNAMLAG---YVQGERMEM-AKELFDVMPCRNVST 345
Query: 554 YVLLCNIYAACNRWDNFRELRQMILDRGIKKTP 586
+ + YA C + + L D+ K+ P
Sbjct: 346 WNTMITGYAQCGKISEAKNL----FDKMPKRDP 374
>sp|Q683I9|PP295_ARATH Pentatricopeptide repeat-containing protein At3g62890
OS=Arabidopsis thaliana GN=PCMP-H82 PE=2 SV=1
Length = 573
Score = 483 bits (1242), Expect = e-135, Method: Compositional matrix adjust.
Identities = 231/525 (44%), Positives = 343/525 (65%), Gaps = 7/525 (1%)
Query: 203 LFGEMERKGVLPTSVTIVLVLSACAKLKDLDVGKRAHRYVKECKIVPNLILENALTDMYA 262
++ M V P T +L + L +G+R H + + + + +L +MY+
Sbjct: 49 VYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYS 108
Query: 263 ACGEMGFALEIFGNIKNKDVISWTAIVTGYINRGQVDMARQYFDQMPERDYVLWTAMIDG 322
+CG++ A +F + +KD+ +W ++V Y G +D AR+ FD+MPER+ + W+ +I+G
Sbjct: 109 SCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLING 168
Query: 323 YLRVNRFREALTLFREMQTSN-----IRPDEFTIVSILTACANLGALELGEWVKTYIDKN 377
Y+ +++EAL LFREMQ +RP+EFT+ ++L+AC LGALE G+WV YIDK
Sbjct: 169 YVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKY 228
Query: 378 KVKNDIFVGNALIDMYCKCGDVEKAQRVFREM-LRKDKFTWTAMIVGLAINGHGDKSLDM 436
V+ DI +G ALIDMY KCG +E+A+RVF + +KD ++AMI LA+ G D+ +
Sbjct: 229 HVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQL 288
Query: 437 FSQMLRA-SIIPDEVTYVGVLSACTHTGMVDEGREYFADMTIQHGIEPNEAHYGCMVDLL 495
FS+M + +I P+ VT+VG+L AC H G+++EG+ YF M + GI P+ HYGCMVDL
Sbjct: 289 FSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLY 348
Query: 496 GRAGHLNEALEVIKNMPMKPNSIVWGALLGACRVHRDAEMAEMAAKQILELDPDNEAVYV 555
GR+G + EA I +MPM+P+ ++WG+LL R+ D + E A K+++ELDP N YV
Sbjct: 349 GRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYV 408
Query: 556 LLCNIYAACNRWDNFRELRQMILDRGIKKTPGCSMIEMNGVVHEFVAGDKSHPQTKEIYL 615
LL N+YA RW + +R + +GI K PGCS +E+ GVVHEFV GD+S +++ IY
Sbjct: 409 LLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSYVEVEGVVHEFVVGDESQQESERIYA 468
Query: 616 KLDEMTSDLKFVGYMPDISEVFLDVGEEDKERAVYQHSEKLAMAFGLISSGPGVTIRIVK 675
LDE+ L+ GY+ D EV LD+ E+DKE A+ HSEKLA+AF L+ + PG +RI+K
Sbjct: 469 MLDEIMQRLREAGYVTDTKEVLLDLNEKDKEIALSYHSEKLAIAFCLMKTRPGTPVRIIK 528
Query: 676 NLRMCVDCHRMAKLVSMVYDREVIVRDKTRFHHFKHGSCSCKDYW 720
NLR+C DCH + K++S ++ RE++VRD RFHHF+ GSCSC+D+W
Sbjct: 529 NLRICGDCHLVMKMISKLFSREIVVRDCNRFHHFRDGSCSCRDFW 573
Score = 154 bits (390), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 106/386 (27%), Positives = 169/386 (43%), Gaps = 76/386 (19%)
Query: 82 LWNTMIKG----YSRIDSHKNGVLIYLDMLKSDVRPDNYTFPFLLKGFTRDIAVEFGKEL 137
LWN +I+ S H + + +YL M V PD +TFPFLL F + + G+
Sbjct: 26 LWNIIIRAIVHNVSSPQRH-SPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRT 84
Query: 138 HCHVLKFGFDSSVFVQNALISTYCLCGEVDMARGIFDVSYKDDVVTWNAMFSGYKRVKQF 197
H +L FG D FV+ +L++ Y CG++ A+ +FD S D+ WN++ + Y +
Sbjct: 85 HAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLI 144
Query: 198 DETRKLFGEMERKGVL------------------------------------PTSVTIVL 221
D+ RKLF EM + V+ P T+
Sbjct: 145 DDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMST 204
Query: 222 VLSACAKLKDLDVGKRAHRYVKECKIVPNLILENALTDMYAACGEMGFALEIFGNI-KNK 280
VLSAC +L L+ GK H Y+ + + +++L AL DMYA CG + A +F + K
Sbjct: 205 VLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKK 264
Query: 281 DVISWTAIVTGYINRGQVDMARQYFDQMPERDYVLWTAMIDGYLRVNRFREALTLFREMQ 340
DV +++A++ G D E LF EM
Sbjct: 265 DVKAYSAMICCLAMYGLTD-------------------------------ECFQLFSEMT 293
Query: 341 TS-NIRPDEFTIVSILTACANLGALELGE-WVKTYIDKNKVKNDIFVGNALIDMYCKCGD 398
TS NI P+ T V IL AC + G + G+ + K I++ + I ++D+Y + G
Sbjct: 294 TSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGL 353
Query: 399 VEKAQRVFREM-LRKDKFTWTAMIVG 423
+++A+ M + D W +++ G
Sbjct: 354 IKEAESFIASMPMEPDVLIWGSLLSG 379
Score = 95.9 bits (237), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 140/300 (46%), Gaps = 18/300 (6%)
Query: 60 SEKGDMKYACKVFRKIPRPSVCLWNTMIKGYSRIDSHKNGVLIYLDML-----KSDVRPD 114
++ G + A K+F ++P +V W+ +I GY +K + ++ +M ++ VRP+
Sbjct: 139 AKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPN 198
Query: 115 NYTFPFLLKGFTRDIAVEFGKELHCHVLKFGFDSSVFVQNALISTYCLCGEVDMARGIFD 174
+T +L R A+E GK +H ++ K+ + + + ALI Y CG ++ A+ +F+
Sbjct: 199 EFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFN 258
Query: 175 -VSYKDDVVTWNAMFSGYKRVKQFDETRKLFGEMERK-GVLPTSVTIVLVLSACAKLKDL 232
+ K DV ++AM DE +LF EM + P SVT V +L AC +
Sbjct: 259 ALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLI 318
Query: 233 DVGKRAHR-YVKECKIVPNLILENALTDMYAACGEMGFALEIFGNIK-NKDVISWTAIVT 290
+ GK + ++E I P++ + D+Y G + A ++ DV+ W ++++
Sbjct: 319 NEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLS 378
Query: 291 GYINRGQVDMARQYFDQMPERD------YVLWTAMIDGYLRVNRFREALTLFREMQTSNI 344
G G + ++ E D YVL + + Y + R+ E + EM+ I
Sbjct: 379 GSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNV---YAKTGRWMEVKCIRHEMEVKGI 435
Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 105/270 (38%), Gaps = 72/270 (26%)
Query: 333 LTLFREMQTSNIRPDEFTIVSILTACANLGALELGEWVKTYIDKNKVKNDIFVGNALIDM 392
++++ M+ + PD T +L + N L LG+ I + D FV +L++M
Sbjct: 47 ISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNM 106
Query: 393 YCKCGDVEKAQRV-------------------------------FREMLRKDKFTWTAMI 421
Y CGD+ AQRV F EM ++ +W+ +I
Sbjct: 107 YSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLI 166
Query: 422 VGLAINGHGDKSLDMFSQML-----RASIIPDEVTYVGVLSACTHTGMVDEGREYFADMT 476
G + G ++LD+F +M A + P+E T VLSAC G +++G+ A +
Sbjct: 167 NGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYID 226
Query: 477 IQH-------------------------------GIEPNEAHYGCMVDLLGRAGHLNEAL 505
H G + + Y M+ L G +E
Sbjct: 227 KYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECF 286
Query: 506 EVIKNMP----MKPNSIVWGALLGACRVHR 531
++ M + PNS+ + +LGAC VHR
Sbjct: 287 QLFSEMTTSDNINPNSVTFVGILGAC-VHR 315
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 478 bits (1229), Expect = e-133, Method: Compositional matrix adjust.
Identities = 270/752 (35%), Positives = 395/752 (52%), Gaps = 92/752 (12%)
Query: 20 ISPIETCESMHQLKQIHSQTIKLGLLTNPTVQNKLVTFC--CSEKGDMKYACKVFRKIPR 77
IS + ES H L ++ G ++N V N LV C D + KVF ++
Sbjct: 140 ISSVRCGESAHAL------SLVTGFISNVFVGNALVAMYSRCRSLSDAR---KVFDEMSV 190
Query: 78 PSVCLWNTMIKGYSRIDSHKNGVLIYLDMLKS-DVRPDNYTFPFLLKGFTRDIAVEFGKE 136
V WN++I+ Y+++ K + ++ M RPDN T +L GK+
Sbjct: 191 WDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQ 250
Query: 137 LHCHVLKFGFDSSVFVQNALISTYCLCGEVDMARGIFDVSYKDDVVTWNAMFSGYKRVKQ 196
LHC + ++FV N L+ Y CG +D A +F DVV+WNAM +GY ++ +
Sbjct: 251 LHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGR 310
Query: 197 FDETRKLFGEMERK-----------------------------------GVLPTSVTIVL 221
F++ +LF +M+ + G+ P VT++
Sbjct: 311 FEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLIS 370
Query: 222 VLSACAKLKDLDVGKRAHRYVKECKIV--------PNLILENALTDMYAACGEMGFALEI 273
VLS CA + L GK H Y + I N+++ N L DMYA C
Sbjct: 371 VLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVI-NQLIDMYAKCK-------- 421
Query: 274 FGNIKNKDVISWTAIVTGYINRGQVDMARQYFDQMP--ERDYVLWTAMIDGYLRVNRFRE 331
+VD AR FD + ERD V WT MI GY + +
Sbjct: 422 -----------------------KVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANK 458
Query: 332 ALTLFREM--QTSNIRPDEFTIVSILTACANLGALELGEWVKTYIDKNKVKN-DIFVGNA 388
AL L EM + RP+ FTI L ACA+L AL +G+ + Y +N+ +FV N
Sbjct: 459 ALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNC 518
Query: 389 LIDMYCKCGDVEKAQRVFREMLRKDKFTWTAMIVGLAINGHGDKSLDMFSQMLRASIIPD 448
LIDMY KCG + A+ VF M+ K++ TWT+++ G ++G+G+++L +F +M R D
Sbjct: 519 LIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLD 578
Query: 449 EVTYVGVLSACTHTGMVDEGREYFADMTIQHGIEPNEAHYGCMVDLLGRAGHLNEALEVI 508
VT + VL AC+H+GM+D+G EYF M G+ P HY C+VDLLGRAG LN AL +I
Sbjct: 579 GVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLI 638
Query: 509 KNMPMKPNSIVWGALLGACRVHRDAEMAEMAAKQILELDPDNEAVYVLLCNIYAACNRWD 568
+ MPM+P +VW A L CR+H E+ E AA++I EL +++ Y LL N+YA RW
Sbjct: 639 EEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWK 698
Query: 569 NFRELRQMILDRGIKKTPGCSMIEMNGVVHEFVAGDKSHPQTKEIYLKLDEMTSDLKFVG 628
+ +R ++ +G+KK PGCS +E F GDK+HP KEIY L + +K +G
Sbjct: 699 DVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQRIKDIG 758
Query: 629 YMPDISEVFLDVGEEDKERAVYQHSEKLAMAFGLISSGPGVTIRIVKNLRMCVDCHRMAK 688
Y+P+ DV +E+K+ +++HSEKLA+A+G++++ G IRI KNLR+C DCH
Sbjct: 759 YVPETGFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITKNLRVCGDCHTAFT 818
Query: 689 LVSMVYDREVIVRDKTRFHHFKHGSCSCKDYW 720
+S + D ++I+RD +RFHHFK+GSCSCK YW
Sbjct: 819 YMSRIIDHDIILRDSSRFHHFKNGSCSCKGYW 850
Score = 276 bits (705), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 176/548 (32%), Positives = 282/548 (51%), Gaps = 27/548 (4%)
Query: 11 STLTQETPLISP--IETCESMHQLKQIHSQTIKLGLLTNPTVQNKLVTFCCSEKGDMKYA 68
S + P I+P I C+++ Q+K IH + + G+LT + + T+ G + +A
Sbjct: 21 SLFSTSAPEITPPFIHKCKTISQVKLIHQKLLSFGILTLNLTSHLISTYI--SVGCLSHA 78
Query: 69 CKVFRKIPRPS---VCLWNTMIKGYSRIDSHKNGVLIYLDMLKSDVRPDNYTFPFLLKGF 125
+ R+ P PS V WN++I+ Y + ++ M PDNYTFPF+ K
Sbjct: 79 VSLLRRFP-PSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKAC 137
Query: 126 TRDIAVEFGKELHCHVLKFGFDSSVFVQNALISTYCLCGEVDMARGIFDVSYKDDVVTWN 185
+V G+ H L GF S+VFV NAL++ Y C + AR +FD DVV+WN
Sbjct: 138 GEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWN 197
Query: 186 AMFSGYKRVKQFDETRKLFGEMERK-GVLPTSVTIVLVLSACAKLKDLDVGKRAHRYVKE 244
++ Y ++ + ++F M + G P ++T+V VL CA L +GK+ H +
Sbjct: 198 SIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVT 257
Query: 245 CKIVPNLILENALTDMYAACGEMGFALEIFGNIKNKDVISWTAIVTGYINRGQVDMARQY 304
+++ N+ + N L DMYA CG M A +F N+ KDV+SW A+V GY G+ + A +
Sbjct: 258 SEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRL 317
Query: 305 FDQMPER----DYVLWTAMIDGYLRVNRFREALTLFREMQTSNIRPDEFTIVSILTACAN 360
F++M E D V W+A I GY + EAL + R+M +S I+P+E T++S+L+ CA+
Sbjct: 318 FEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCAS 377
Query: 361 LGALELGEWVKTY-------IDKNKVKNDIFVGNALIDMYCKCGDVEKAQRVFREMLRKD 413
+GAL G+ + Y + KN ++ V N LIDMY KC V+ A+ +F + K+
Sbjct: 378 VGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKE 437
Query: 414 K--FTWTAMIVGLAINGHGDKSLDMFSQMLR--ASIIPDEVTYVGVLSACTHTGMVDEGR 469
+ TWT MI G + +G +K+L++ S+M P+ T L AC + G+
Sbjct: 438 RDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGK 497
Query: 470 EYFA-DMTIQHGIEPNEAHYGCMVDLLGRAGHLNEALEVIKNMPMKPNSIVWGALLGACR 528
+ A + Q P C++D+ + G +++A V NM M N + W +L+
Sbjct: 498 QIHAYALRNQQNAVPLFVS-NCLIDMYAKCGSISDARLVFDNM-MAKNEVTWTSLMTGYG 555
Query: 529 VHRDAEMA 536
+H E A
Sbjct: 556 MHGYGEEA 563
Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 139/326 (42%), Gaps = 27/326 (8%)
Query: 4 NSSISPPSTLTQETPLISPIETCESMHQL---KQIHSQTIK--LGLLTNPTVQNKLVTFC 58
+S I P E LIS + C S+ L K+IH IK + L N +V
Sbjct: 358 SSGIKP-----NEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVI-- 410
Query: 59 CSEKGDMKYACK-------VFRKI-PRP-SVCLWNTMIKGYSRIDSHKNGVLIYLDMLKS 109
++ DM CK +F + P+ V W MI GYS+ + + +M +
Sbjct: 411 -NQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEE 469
Query: 110 D--VRPDNYTFPFLLKGFTRDIAVEFGKELHCHVLKFGFDS-SVFVQNALISTYCLCGEV 166
D RP+ +T L A+ GK++H + L+ ++ +FV N LI Y CG +
Sbjct: 470 DCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSI 529
Query: 167 DMARGIFDVSYKDDVVTWNAMFSGYKRVKQFDETRKLFGEMERKGVLPTSVTIVLVLSAC 226
AR +FD + VTW ++ +GY +E +F EM R G VT+++VL AC
Sbjct: 530 SDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYAC 589
Query: 227 AKLKDLDVGKRAHRYVKEC-KIVPNLILENALTDMYAACGEMGFALEIFGNIK-NKDVIS 284
+ +D G +K + P L D+ G + AL + + +
Sbjct: 590 SHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVV 649
Query: 285 WTAIVTGYINRGQVDMARQYFDQMPE 310
W A ++ G+V++ +++ E
Sbjct: 650 WVAFLSCCRIHGKVELGEYAAEKITE 675
>sp|Q9LXE8|PP386_ARATH Pentatricopeptide repeat-containing protein At5g15340,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H91 PE=2
SV=1
Length = 623
Score = 477 bits (1227), Expect = e-133, Method: Compositional matrix adjust.
Identities = 252/602 (41%), Positives = 364/602 (60%), Gaps = 18/602 (2%)
Query: 134 GKELHCHVLKFGFDSS--VFVQNALISTYCLCGEVDMARGIFD---VSYKDDVVTWNAMF 188
GKELH + G + ++ NAL Y GE+ A+ +FD +S KD+V W +
Sbjct: 25 GKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPLSEKDNV-DWTTLL 83
Query: 189 SGYKRVKQFDETRKLFGEMERKGVLPTSVTIVLVLSACAKLKDLDVGKRAHRYVKECKIV 248
S + R + KLF EM RK V V++V + CAKL+DL ++ H + ++
Sbjct: 84 SSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVL 143
Query: 249 PNLILENALTDMYAACGEMGFALEIFGNIKNKDVISWTAIVTGYINRGQVDMARQYFDQM 308
++ + NAL DMY CG + IF ++ K V+SWT ++ + ++ R+ F +M
Sbjct: 144 TSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEM 203
Query: 309 PERDYVLWTAMIDGYLRVNRFREALTLFREMQTSNIRPDEF-TIVSILTACANLGALELG 367
PER+ V WT M+ GYL RE L L EM F T+ S+L+ACA G L +G
Sbjct: 204 PERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVG 263
Query: 368 EWVKTYIDKNKVK-------NDIFVGNALIDMYCKCGDVEKAQRVFREMLRKDKFTWTAM 420
WV Y K ++ +D+ VG AL+DMY KCG+++ + VFR M +++ TW A+
Sbjct: 264 RWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNAL 323
Query: 421 IVGLAINGHGDKSLDMFSQMLRASIIPDEVTYVGVLSACTHTGMVDEGREYFADMTIQHG 480
GLA++G G +DMF QM+R + PD++T+ VLSAC+H+G+VDEG F + +G
Sbjct: 324 FSGLAMHGKGRMVIDMFPQMIR-EVKPDDLTFTAVLSACSHSGIVDEGWRCFHSLRF-YG 381
Query: 481 IEPNEAHYGCMVDLLGRAGHLNEALEVIKNMPMKPNSIVWGALLGACRVHRDAEMAEMAA 540
+EP HY CMVDLLGRAG + EA +++ MP+ PN +V G+LLG+C VH E+AE
Sbjct: 382 LEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSVHGKVEIAERIK 441
Query: 541 KQILELDPDNEAVYVLLCNIYAACNRWDNFRELRQMILDRGIKKTPGCSMIEMNGVVHEF 600
++++++ P N +L+ N+Y A R D LR + RGI+K PG S I +N VH F
Sbjct: 442 RELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGIRKIPGLSSIYVNDSVHRF 501
Query: 601 VAGDKSHPQTKEIYLKLDEMTSDLKFVGYMPDISE-VFLDVGE-EDKERAVYQHSEKLAM 658
+GD+SHP+TKEIYLKL+E+ ++ GY+PD+S V G+ E+KE+A+ HSEKLA+
Sbjct: 502 SSGDRSHPRTKEIYLKLNEVIERIRSAGYVPDVSGLVSHSEGDLEEKEQALCCHSEKLAV 561
Query: 659 AFGLISSGPGVTIRIVKNLRMCVDCHRMAKLVSMVYDREVIVRDKTRFHHFKHGSCSCKD 718
FGL+ + P + + KNLR+C DCH K+VS VYDRE+I+RD+ RFH FK GSCSC D
Sbjct: 562 CFGLLETKPSTPLLVFKNLRICRDCHSAMKIVSKVYDREIIIRDRNRFHQFKGGSCSCSD 621
Query: 719 YW 720
YW
Sbjct: 622 YW 623
Score = 110 bits (276), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 114/491 (23%), Positives = 215/491 (43%), Gaps = 93/491 (18%)
Query: 33 KQIHSQTIKLGLLTNPT--VQNKLVTFCCSEKGDMKYACKVFRKIP--RPSVCLWNTMIK 88
K++H+ GL P + N L F S G+M A K+F +IP W T++
Sbjct: 26 KELHAVLTTSGLKKAPRSYLSNALFQFYAS-SGEMVTAQKLFDEIPLSEKDNVDWTTLLS 84
Query: 89 GYSRIDSHKNGVLIYLDMLKSDVRPDNYTFPFLLKGFTRDIAVEFGKELHCHVLKFGFDS 148
+SR N + ++++M + V D+ + L + + F ++ H +K G +
Sbjct: 85 SFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVLT 144
Query: 149 SVFVQNALISTYCLCGEVDMARGIFDVSYKDDVVTWNAMFSGYKRVKQFDETRKLFGEM- 207
SV V NAL+ Y CG V + IF+ + VV+W + + + + R++F EM
Sbjct: 145 SVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMP 204
Query: 208 ERKGVLPTS-------------------------------VTIVLVLSACAKLKDLDVGK 236
ER V T VT+ +LSACA+ +L VG+
Sbjct: 205 ERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGR 264
Query: 237 RAHRYVKECKIV-------PNLILENALTDMYAACGEMGFALEIFGNIKNKDVISWTAIV 289
H Y + +++ ++++ AL DMYA CG + ++ +F ++ ++V++W A+
Sbjct: 265 WVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNALF 324
Query: 290 TGYINRGQVDMARQYFDQMPERDYVLWTAMIDGYLRVNRFREALTLFREMQTSNIRPDEF 349
+G G+ M F QM RE ++PD+
Sbjct: 325 SGLAMHGKGRMVIDMFPQM--------------------IRE------------VKPDDL 352
Query: 350 TIVSILTACANLGALELGEW-----VKTYIDKNKVKNDIFVGNALIDMYCKCGDVEKAQR 404
T ++L+AC++ G ++ G W ++ Y + KV + ++D+ + G +E+A+
Sbjct: 353 TFTAVLSACSHSGIVDEG-WRCFHSLRFYGLEPKVDHY----ACMVDLLGRAGLIEEAEI 407
Query: 405 VFREM-LRKDKFTWTAMIVGLAINGHGDKSLDMFSQMLRASIIPDEVTYVGVLSACTHTG 463
+ REM + ++ +++ +++G + + + ++++ S P Y ++S
Sbjct: 408 LMREMPVPPNEVVLGSLLGSCSVHGKVEIAERIKRELIQMS--PGNTEYQILMS----NM 461
Query: 464 MVDEGREYFAD 474
V EGR AD
Sbjct: 462 YVAEGRSDIAD 472
>sp|Q9LW32|PP258_ARATH Pentatricopeptide repeat-containing protein At3g26782,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H34 PE=2
SV=1
Length = 659
Score = 473 bits (1218), Expect = e-132, Method: Compositional matrix adjust.
Identities = 240/655 (36%), Positives = 380/655 (58%), Gaps = 36/655 (5%)
Query: 73 RKIPRPSVCLWNTMIKGYSRIDSHKNGVLIYLDMLKSDVRPDNYTFPFLLKGFTRDIAVE 132
R + + V WN++I +R +L + M K + P +FP +K + +
Sbjct: 34 RYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIF 93
Query: 133 FGKELHCHVLKFGFDSSVFVQNALISTYCLCGEVDMARGIFDVSYKDDVVTWNAMFSGYK 192
GK+ H FG+ S +FV +ALI Y CG+++ AR +FD K ++V+W +M GY
Sbjct: 94 SGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYD 153
Query: 193 RVKQFDETRKLFGEM------ERKGVLPTSVTIVLVLSACAKLKDLDVGKRAHRYVKECK 246
+ LF ++ + + S+ +V V+SAC+++ + + H +V +
Sbjct: 154 LNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRG 213
Query: 247 IVPNLILENALTDMYAACGEMGFALEIFGNIKNKDVISWTAIVTGYINRGQVDMARQYFD 306
+ + N L D YA GE G A+ AR+ FD
Sbjct: 214 FDRGVSVGNTLLDAYAKGGEGGVAV-----------------------------ARKIFD 244
Query: 307 QMPERDYVLWTAMIDGYLRVNRFREALTLFREMQTSNIRP-DEFTIVSILTACANLGALE 365
Q+ ++D V + +++ Y + EA +FR + + + + T+ ++L A ++ GAL
Sbjct: 245 QIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALR 304
Query: 366 LGEWVKTYIDKNKVKNDIFVGNALIDMYCKCGDVEKAQRVFREMLRKDKFTWTAMIVGLA 425
+G+ + + + +++D+ VG ++IDMYCKCG VE A++ F M K+ +WTAMI G
Sbjct: 305 IGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYG 364
Query: 426 INGHGDKSLDMFSQMLRASIIPDEVTYVGVLSACTHTGMVDEGREYFADMTIQHGIEPNE 485
++GH K+L++F M+ + + P+ +T+V VL+AC+H G+ EG +F M + G+EP
Sbjct: 365 MHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGL 424
Query: 486 AHYGCMVDLLGRAGHLNEALEVIKNMPMKPNSIVWGALLGACRVHRDAEMAEMAAKQILE 545
HYGCMVDLLGRAG L +A ++I+ M MKP+SI+W +LL ACR+H++ E+AE++ ++ E
Sbjct: 425 EHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFE 484
Query: 546 LDPDNEAVYVLLCNIYAACNRWDNFRELRQMILDRGIKKTPGCSMIEMNGVVHEFVAGDK 605
LD N Y+LL +IYA RW + +R ++ +RG+ K PG S++E+NG VH F+ GD+
Sbjct: 485 LDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDE 544
Query: 606 SHPQTKEIYLKLDEMTSDLKFVGYMPDISEVFLDVGEEDKERAVYQHSEKLAMAFGLISS 665
HPQ ++IY L E+ L GY+ + S V DV EE+KE + HSEKLA+AFG++++
Sbjct: 545 EHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNT 604
Query: 666 GPGVTIRIVKNLRMCVDCHRMAKLVSMVYDREVIVRDKTRFHHFKHGSCSCKDYW 720
PG T+ +VKNLR+C DCH + KL+S + DRE +VRD RFHHFK G CSC DYW
Sbjct: 605 VPGSTVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 114/441 (25%), Positives = 201/441 (45%), Gaps = 46/441 (10%)
Query: 1 MFSNSSISPPSTLTQETPLISPIETCESMHQL---KQIHSQTIKLGLLTNPTVQNKLVTF 57
+ + SS+ S + I+ C S+ + KQ H Q G ++ V + L+
Sbjct: 61 LLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVM 120
Query: 58 CCSEKGDMKYACKVFRKIPRPSVCLWNTMIKGYSRIDSHKNGVLIYLDMLKSDVRPDNYT 117
S G ++ A KVF +IP+ ++ W +MI+GY + + V ++ D+L + D+
Sbjct: 121 Y-STCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAM 179
Query: 118 F------PFLLKGFTRDIAVEFGKELHCHVLKFGFDSSVFVQNALISTYCLCGE--VDMA 169
F ++ +R A + +H V+K GFD V V N L+ Y GE V +A
Sbjct: 180 FLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVA 239
Query: 170 RGIFDVSYKDDVVTWNAMFSGYKRVKQFDETRKLFGEMERKGVLP-TSVTIVLVLSACAK 228
R IFD D V++N++ S Y + +E ++F + + V+ ++T+ VL A +
Sbjct: 240 RKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSH 299
Query: 229 LKDLDVGKRAHRYVKECKIVPNLILENALTDMYAACGEMGFALEIFGNIKNKDVISWTAI 288
L +GK H V + ++I+ ++ DMY C
Sbjct: 300 SGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKC------------------------ 335
Query: 289 VTGYINRGQVDMARQYFDQMPERDYVLWTAMIDGYLRVNRFREALTLFREMQTSNIRPDE 348
G+V+ AR+ FD+M ++ WTAMI GY +AL LF M S +RP+
Sbjct: 336 -------GRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNY 388
Query: 349 FTIVSILTACANLGA-LELGEWVKTYIDKNKVKNDIFVGNALIDMYCKCGDVEKAQRVFR 407
T VS+L AC++ G +E W + V+ + ++D+ + G ++KA + +
Sbjct: 389 ITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQ 448
Query: 408 EM-LRKDKFTWTAMIVGLAIN 427
M ++ D W++++ I+
Sbjct: 449 RMKMKPDSIIWSSLLAACRIH 469
Score = 93.2 bits (230), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 133/301 (44%), Gaps = 7/301 (2%)
Query: 19 LISPIETCESMHQ---LKQIHSQTIKLGLLTNPTVQNKLV-TFCCSEKGDMKYACKVFRK 74
L+S I C + + IHS IK G +V N L+ + +G + A K+F +
Sbjct: 186 LVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQ 245
Query: 75 IPRPSVCLWNTMIKGYSRIDSHKNGVLIYLDMLKSDVRPDN-YTFPFLLKGFTRDIAVEF 133
I +N+++ Y++ ++ ++K+ V N T +L + A+
Sbjct: 246 IVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRI 305
Query: 134 GKELHCHVLKFGFDSSVFVQNALISTYCLCGEVDMARGIFDVSYKDDVVTWNAMFSGYKR 193
GK +H V++ G + V V ++I YC CG V+ AR FD +V +W AM +GY
Sbjct: 306 GKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGM 365
Query: 194 VKQFDETRKLFGEMERKGVLPTSVTIVLVLSACAKLKDLDVGKRAHRYVK-ECKIVPNLI 252
+ +LF M GV P +T V VL+AC+ G R +K + P L
Sbjct: 366 HGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLE 425
Query: 253 LENALTDMYAACGEMGFALEIFGNIKNK-DVISWTAIVTGYINRGQVDMARQYFDQMPER 311
+ D+ G + A ++ +K K D I W++++ V++A ++ E
Sbjct: 426 HYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFEL 485
Query: 312 D 312
D
Sbjct: 486 D 486
>sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein At1g20230
OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2
Length = 760
Score = 473 bits (1217), Expect = e-132, Method: Compositional matrix adjust.
Identities = 245/730 (33%), Positives = 397/730 (54%), Gaps = 48/730 (6%)
Query: 34 QIHSQTIKLGLLTNPTVQNKLVT----FCCSEKGDMKYACKVFRKIPRPSVCLWNTMIKG 89
Q H++ +K G + + KL+ + C D+ V + IP P++ ++++I
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADL-----VLQSIPDPTIYSFSSLIYA 90
Query: 90 YSRIDSHKNGVLIYLDMLKSDVRPDNYTFPFLLKGFTRDIAVEFGKELHCHVLKFGFDSS 149
++ + ++ M + PD++ P L K A + GK++HC G D
Sbjct: 91 LTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMD 150
Query: 150 VFVQNALISTYCLCGEVDMARGIFDVSYKDDVVT-------------------------- 183
FVQ ++ Y CG + AR +FD DVVT
Sbjct: 151 AFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMES 210
Query: 184 ---------WNAMFSGYKRVKQFDETRKLFGEMERKGVLPTSVTIVLVLSACAKLKDLDV 234
WN + SG+ R E +F ++ G P VT+ VL + + L++
Sbjct: 211 SGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNM 270
Query: 235 GKRAHRYVKECKIVPNLILENALTDMYAACGEMGFALEIFGNIKNKDVISWTAIVTGYIN 294
G+ H YV + ++ + + +A+ DMY G + + +F + + A +TG
Sbjct: 271 GRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSR 330
Query: 295 RGQVDMARQYFD----QMPERDYVLWTAMIDGYLRVNRFREALTLFREMQTSNIRPDEFT 350
G VD A + F+ Q E + V WT++I G + + EAL LFREMQ + ++P+ T
Sbjct: 331 NGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVT 390
Query: 351 IVSILTACANLGALELGEWVKTYIDKNKVKNDIFVGNALIDMYCKCGDVEKAQRVFREML 410
I S+L AC N+ AL G + + + +++ VG+ALIDMY KCG + +Q VF M
Sbjct: 391 IPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMP 450
Query: 411 RKDKFTWTAMIVGLAINGHGDKSLDMFSQMLRASIIPDEVTYVGVLSACTHTGMVDEGRE 470
K+ W +++ G +++G + + +F ++R + PD +++ +LSAC G+ DEG +
Sbjct: 451 TKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWK 510
Query: 471 YFADMTIQHGIEPNEAHYGCMVDLLGRAGHLNEALEVIKNMPMKPNSIVWGALLGACRVH 530
YF M+ ++GI+P HY CMV+LLGRAG L EA ++IK MP +P+S VWGALL +CR+
Sbjct: 511 YFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQ 570
Query: 531 RDAEMAEMAAKQILELDPDNEAVYVLLCNIYAACNRWDNFRELRQMILDRGIKKTPGCSM 590
+ ++AE+AA+++ L+P+N YVLL NIYAA W +R + G+KK PGCS
Sbjct: 571 NNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSW 630
Query: 591 IEMNGVVHEFVAGDKSHPQTKEIYLKLDEMTSDLKFVGYMPDISEVFLDVGEEDKERAVY 650
I++ V+ +AGDKSHPQ +I K+DE++ +++ G+ P++ DV E+++E+ ++
Sbjct: 631 IQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLW 690
Query: 651 QHSEKLAMAFGLISSGPGVTIRIVKNLRMCVDCHRMAKLVSMVYDREVIVRDKTRFHHFK 710
HSEKLA+ FGL+++ G ++++KNLR+C DCH + K +S RE+ +RD RFHHFK
Sbjct: 691 GHSEKLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFK 750
Query: 711 HGSCSCKDYW 720
G CSC D+W
Sbjct: 751 DGICSCGDFW 760
Score = 38.5 bits (88), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/92 (22%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Query: 33 KQIHSQTIKLGLLTNPTVQNKLVTFCCSEKGDMKYACKVFRKIPRPSVCLWNTMIKGYSR 92
+ H +++ LL N V + L+ ++ G + + VF +P ++ WN+++ G+S
Sbjct: 408 RSTHGFAVRVHLLDNVHVGSALIDMY-AKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSM 466
Query: 93 IDSHKNGVLIYLDMLKSDVRPDNYTFPFLLKG 124
K + I+ ++++ ++PD +F LL
Sbjct: 467 HGKAKEVMSIFESLMRTRLKPDFISFTSLLSA 498
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 473 bits (1217), Expect = e-132, Method: Compositional matrix adjust.
Identities = 252/689 (36%), Positives = 383/689 (55%), Gaps = 34/689 (4%)
Query: 33 KQIHSQTIKLGLLTNPTVQNKLVTFCCSEKGDMKYACKVFRKIPRPSVCLWNTMIKGYSR 92
+Q+H +KLGL TV N L+ C + +A VF + + WN++I G ++
Sbjct: 335 QQVHCMALKLGLDLMLTVSNSLINMYCKLR-KFGFARTVFDNMSERDLISWNSVIAGIAQ 393
Query: 93 IDSHKNGVLIYLDMLKSDVRPDNYTFPFLLKGFTR-DIAVEFGKELHCHVLKFGFDSSVF 151
V +++ +L+ ++PD YT +LK + + K++H H +K S F
Sbjct: 394 NGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSF 453
Query: 152 VQNALISTYCLCGEVDMARGIFDVSYKDDVVTWNAMFSGYKRVKQFDETRKLFGEMERKG 211
V ALI Y + A +F+ + D+V WNAM +GY + +T KLF M ++G
Sbjct: 454 VSTALIDAYSRNRCMKEAEILFE-RHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQG 512
Query: 212 VLPTSVTIVLVLSACAKLKDLDVGKRAHRYVKECKIVPNLILENALTDMYAACGEMGFAL 271
T+ V C L ++ GK+ H Y + +L + + + DMY CG+M A
Sbjct: 513 ERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQ 572
Query: 272 EIFGNIKNKDVISWTAIVTGYINRGQVDMARQYFDQMPERDYVLWTAMIDGYLRVNRFRE 331
F +I D ++WT +++G I G+ ER
Sbjct: 573 FAFDSIPVPDDVAWTTMISGCIENGE-----------EER-------------------- 601
Query: 332 ALTLFREMQTSNIRPDEFTIVSILTACANLGALELGEWVKTYIDKNKVKNDIFVGNALID 391
A +F +M+ + PDEFTI ++ A + L ALE G + K ND FVG +L+D
Sbjct: 602 AFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVD 661
Query: 392 MYCKCGDVEKAQRVFREMLRKDKFTWTAMIVGLAINGHGDKSLDMFSQMLRASIIPDEVT 451
MY KCG ++ A +F+ + + W AM+VGLA +G G ++L +F QM I PD+VT
Sbjct: 662 MYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVT 721
Query: 452 YVGVLSACTHTGMVDEGREYFADMTIQHGIEPNEAHYGCMVDLLGRAGHLNEALEVIKNM 511
++GVLSAC+H+G+V E ++ M +GI+P HY C+ D LGRAG + +A +I++M
Sbjct: 722 FIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESM 781
Query: 512 PMKPNSIVWGALLGACRVHRDAEMAEMAAKQILELDPDNEAVYVLLCNIYAACNRWDNFR 571
M+ ++ ++ LL ACRV D E + A ++LEL+P + + YVLL N+YAA ++WD +
Sbjct: 782 SMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMK 841
Query: 572 ELRQMILDRGIKKTPGCSMIEMNGVVHEFVAGDKSHPQTKEIYLKLDEMTSDLKFVGYMP 631
R M+ +KK PG S IE+ +H FV D+S+ QT+ IY K+ +M D+K GY+P
Sbjct: 842 LARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVP 901
Query: 632 DISEVFLDVGEEDKERAVYQHSEKLAMAFGLISSGPGVTIRIVKNLRMCVDCHRMAKLVS 691
+ +DV EE+KERA+Y HSEKLA+AFGL+S+ P IR++KNLR+C DCH K ++
Sbjct: 902 ETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIA 961
Query: 692 MVYDREVIVRDKTRFHHFKHGSCSCKDYW 720
VY+RE+++RD RFH FK G CSC DYW
Sbjct: 962 KVYNREIVLRDANRFHRFKDGICSCGDYW 990
Score = 186 bits (472), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 133/489 (27%), Positives = 227/489 (46%), Gaps = 47/489 (9%)
Query: 103 YLDMLKSDVRPDNYTFPFLLKGFTRDIAVEFGKELHCHVLKFGFDSSVFVQNALISTYCL 162
+ DM++SDV D TF +L + ++ G+++HC LK G D + V N+LI+ YC
Sbjct: 303 FADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCK 362
Query: 163 CGEVDMARGIFDVSYKDDVVTWNAMFSGYKRVKQFDETRKLFGEMERKGVLPTSVTIVLV 222
+ AR +FD + D+++WN++ +G + E LF ++ R G+ P T+ V
Sbjct: 363 LRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSV 422
Query: 223 LSACAKLKD-LDVGKRAHRYVKECKIVPNLILENALTDMYAACGEMGFALEIFGNIKNKD 281
L A + L + L + K+ H + + V + + AL D Y+ +N+
Sbjct: 423 LKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYS---------------RNR- 466
Query: 282 VISWTAIVTGYINRGQVDMARQYFDQMPERDYVLWTAMIDGYLRVNRFREALTLFREMQT 341
+ ++ R FD V W AM+ GY + + + L LF M
Sbjct: 467 ----------CMKEAEILFERHNFD------LVAWNAMMAGYTQSHDGHKTLKLFALMHK 510
Query: 342 SNIRPDEFTIVSILTACANLGALELGEWVKTYIDKNKVKNDIFVGNALIDMYCKCGDVEK 401
R D+FT+ ++ C L A+ G+ V Y K+ D++V + ++DMY KCGD+
Sbjct: 511 QGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSA 570
Query: 402 AQRVFREMLRKDKFTWTAMIVGLAINGHGDKSLDMFSQMLRASIIPDEVTYVGVLSACTH 461
AQ F + D WT MI G NG +++ +FSQM ++PDE T + A +
Sbjct: 571 AQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSC 630
Query: 462 TGMVDEGREYFADMTIQHGIEPNEAHYG-CMVDLLGRAGHLNEALEVIKNMPMKPNSIVW 520
+++GR+ A+ + N+ G +VD+ + G +++A + K + M N W
Sbjct: 631 LTALEQGRQIHANALKLNC--TNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMM-NITAW 687
Query: 521 GALLGACRVHRDAEMAEMAAKQI--LELDPDNEAVYVLLCNIYAACNR----WDNFRELR 574
A+L H + + KQ+ L + PD V + +AC+ + ++ +R
Sbjct: 688 NAMLVGLAQHGEGKETLQLFKQMKSLGIKPDK----VTFIGVLSACSHSGLVSEAYKHMR 743
Query: 575 QMILDRGIK 583
M D GIK
Sbjct: 744 SMHGDYGIK 752
Score = 143 bits (361), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 134/584 (22%), Positives = 245/584 (41%), Gaps = 56/584 (9%)
Query: 60 SEKGDMKYACKVFRKIPRPSVCLWNTMIKGYSR-----IDSHKNGVLIYLDMLKSDVRPD 114
S+ G + YA +VF K+P + WN+++ Y++ +++ + L++ + + V
Sbjct: 85 SKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTS 144
Query: 115 NYTFPFLLKGFTRDIAVEFGKELHCHVLKFGFDSSVFVQNALISTYCLCGEVDMARGIFD 174
T +LK V + H + K G D FV AL++ Y G+V + +F+
Sbjct: 145 RMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFE 204
Query: 175 VSYKDDVVTWNAMFSGYKRVKQFDETRKLFGEMERKGVLPTSVTIVLVLSACAKLKDLDV 234
DVV WN M Y + +E L G+ P +T+ L+ D D
Sbjct: 205 EMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISG--DDSDA 262
Query: 235 GK-RAHRYVKECKIVPNLILENALTDMYAACGEMGFALEIFGNIKNKDV---------IS 284
G+ ++ + V +I N Y G+ L+ F ++ DV +
Sbjct: 263 GQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILML 322
Query: 285 WTAIVTGYINRGQ---------------------VDM---------ARQYFDQMPERDYV 314
TA+ + GQ ++M AR FD M ERD +
Sbjct: 323 ATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLI 382
Query: 315 LWTAMIDGYLRVNRFREALTLFREMQTSNIRPDEFTIVSILTACANLG-ALELGEWVKTY 373
W ++I G + EA+ LF ++ ++PD++T+ S+L A ++L L L + V +
Sbjct: 383 SWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVH 442
Query: 374 IDKNKVKNDIFVGNALIDMYCKCGDVEKAQRVFREMLRKDKFTWTAMIVGLAINGHGDKS 433
K +D FV ALID Y + +++A+ +F E D W AM+ G + G K+
Sbjct: 443 AIKINNVSDSFVSTALIDAYSRNRCMKEAEILF-ERHNFDLVAWNAMMAGYTQSHDGHKT 501
Query: 434 LDMFSQMLRASIIPDEVTYVGVLSACTHTGMVDEGREYFADMTIQHGIEPNEAHYGCMVD 493
L +F+ M + D+ T V C +++G++ A I+ G + + ++D
Sbjct: 502 LKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHA-YAIKSGYDLDLWVSSGILD 560
Query: 494 LLGRAGHLNEALEVIKNMPMKPNSIVWGALLGACRVHRDAEMAEMAAKQ--ILELDPDNE 551
+ + G ++ A ++P+ P+ + W ++ C + + E A Q ++ + PD E
Sbjct: 561 MYVKCGDMSAAQFAFDSIPV-PDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPD-E 618
Query: 552 AVYVLLCNIYAACNRWDNFRELRQMILDRGIKKTP--GCSMIEM 593
L + + R++ L P G S+++M
Sbjct: 619 FTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDM 662
Score = 134 bits (338), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 101/402 (25%), Positives = 180/402 (44%), Gaps = 36/402 (8%)
Query: 10 PSTLTQETPLISPIETCESMHQLKQIHSQTIKLGLLTNPTVQNKLVTFCCSEKGDMKYAC 69
P T + L + E + KQ+H IK+ +++ V L+ S MK A
Sbjct: 414 PDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALID-AYSRNRCMKEAE 472
Query: 70 KVFRKIPRPSVCLWNTMIKGYSRI-DSHKNGVLIYLDMLKSDVRPDNYTFPFLLKGFTRD 128
+F + + WN M+ GY++ D HK L L M K R D++T + K
Sbjct: 473 ILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFAL-MHKQGERSDDFTLATVFKTCGFL 530
Query: 129 IAVEFGKELHCHVLKFGFDSSVFVQNALISTYCLCGEVDMARGIFDVSYKDDVVTWNAMF 188
A+ GK++H + +K G+D ++V + ++ Y CG++ A+ FD D V W M
Sbjct: 531 FAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMI 590
Query: 189 SGYKRVKQFDETRKLFGEMERKGVLPTSVTIVLVLSACAKLKDLDVGKRAHRYVKECKIV 248
SG + + +F +M GVLP TI + A + L L+ G++ H +
Sbjct: 591 SGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCT 650
Query: 249 PNLILENALTDMYAACGEMGFALEIFGNIKNKDVISWTAIVTGYINRGQVDMARQYFDQM 308
+ + +L DMYA CG + A +F I+ ++ +W A++ G G+
Sbjct: 651 NDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEG---------- 700
Query: 309 PERDYVLWTAMIDGYLRVNRFREALTLFREMQTSNIRPDEFTIVSILTACANLGAL-ELG 367
+E L LF++M++ I+PD+ T + +L+AC++ G + E
Sbjct: 701 ---------------------KETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAY 739
Query: 368 EWVKTYIDKNKVKNDIFVGNALIDMYCKCGDVEKAQRVFREM 409
+ +++ +K +I + L D + G V++A+ + M
Sbjct: 740 KHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESM 781
Score = 117 bits (293), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 93/386 (24%), Positives = 164/386 (42%), Gaps = 44/386 (11%)
Query: 118 FPFLLKGFTRDIAVEFGKELHCHVLKFGFDSSVFVQNALISTYCLCGEVDMARGIFDVSY 177
F FL T + GK H +L F + F+ N LIS Y CG + AR +FD
Sbjct: 43 FGFLRNAITSS-DLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMP 101
Query: 178 KDDVVTWNAMFSGYKR-----VKQFDETRKLFGEMERKGVLPTSVTIVLVLSACAKLKDL 232
D+V+WN++ + Y + V+ + LF + + V + +T+ +L C +
Sbjct: 102 DRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYV 161
Query: 233 DVGKRAHRYVKECKIVPNLILENALTDMYAACGEMGFALEIFGNIKNKDVISWTAIVTGY 292
+ H Y + + + + AL ++Y G++ +F + +DV+ W ++ Y
Sbjct: 162 WASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAY 221
Query: 293 INRG----QVDMARQYFDQ--MPERDYVLWTAMIDG------------------------ 322
+ G +D++ + P + A I G
Sbjct: 222 LEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEII 281
Query: 323 --------YLRVNRFREALTLFREMQTSNIRPDEFTIVSILTACANLGALELGEWVKTYI 374
YL ++ L F +M S++ D+ T + +L + +L LG+ V
Sbjct: 282 FRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMA 341
Query: 375 DKNKVKNDIFVGNALIDMYCKCGDVEKAQRVFREMLRKDKFTWTAMIVGLAINGHGDKSL 434
K + + V N+LI+MYCK A+ VF M +D +W ++I G+A NG +++
Sbjct: 342 LKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAV 401
Query: 435 DMFSQMLRASIIPDEVTYVGVLSACT 460
+F Q+LR + PD+ T VL A +
Sbjct: 402 CLFMQLLRCGLKPDQYTMTSVLKAAS 427
>sp|Q9FND7|PP410_ARATH Putative pentatricopeptide repeat-containing protein At5g40405
OS=Arabidopsis thaliana GN=PCMP-H14 PE=3 SV=1
Length = 612
Score = 472 bits (1215), Expect = e-132, Method: Compositional matrix adjust.
Identities = 230/559 (41%), Positives = 345/559 (61%), Gaps = 6/559 (1%)
Query: 166 VDMARGIFDVSYKDDVVTWNAMFSGYKRV----KQFDETRKLFGEMERKGVLPTSVTIVL 221
+D A I D S K + N+M + + K FD R++ + P + T+
Sbjct: 56 LDYANQILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSS--GNDLKPDNYTVNF 113
Query: 222 VLSACAKLKDLDVGKRAHRYVKECKIVPNLILENALTDMYAACGEMGFALEIFGNIKNKD 281
++ AC L+ + G + H + ++ L +YA G + ++F +I D
Sbjct: 114 LVQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPD 173
Query: 282 VISWTAIVTGYINRGQVDMARQYFDQMPERDYVLWTAMIDGYLRVNRFREALTLFREMQT 341
+ TA+VT G V AR+ F+ MPERD + W AMI GY +V REAL +F MQ
Sbjct: 174 FVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQL 233
Query: 342 SNIRPDEFTIVSILTACANLGALELGEWVKTYIDKNKVKNDIFVGNALIDMYCKCGDVEK 401
++ + ++S+L+AC LGAL+ G W +YI++NK+K + + L+D+Y KCGD+EK
Sbjct: 234 EGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEK 293
Query: 402 AQRVFREMLRKDKFTWTAMIVGLAINGHGDKSLDMFSQMLRASIIPDEVTYVGVLSACTH 461
A VF M K+ +TW++ + GLA+NG G+K L++FS M + + P+ VT+V VL C+
Sbjct: 294 AMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSV 353
Query: 462 TGMVDEGREYFADMTIQHGIEPNEAHYGCMVDLLGRAGHLNEALEVIKNMPMKPNSIVWG 521
G VDEG+ +F M + GIEP HYGC+VDL RAG L +A+ +I+ MPMKP++ VW
Sbjct: 354 VGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWS 413
Query: 522 ALLGACRVHRDAEMAEMAAKQILELDPDNEAVYVLLCNIYAACNRWDNFRELRQMILDRG 581
+LL A R++++ E+ +A+K++LEL+ N YVLL NIYA N WDN +RQ + +G
Sbjct: 414 SLLHASRMYKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKG 473
Query: 582 IKKTPGCSMIEMNGVVHEFVAGDKSHPQTKEIYLKLDEMTSDLKFVGYMPDISEVFLDVG 641
++K PGCS++E+NG VHEF GDKSHP+ +I +++ L+ GY D + V D+
Sbjct: 474 VRKQPGCSVMEVNGEVHEFFVGDKSHPKYTQIDAVWKDISRRLRLAGYKADTTPVMFDID 533
Query: 642 EEDKERAVYQHSEKLAMAFGLISSGPGVTIRIVKNLRMCVDCHRMAKLVSMVYDREVIVR 701
EE+KE A+ HSEK A+AFG++S V IRIVKNLR+C DCH+++ ++S +++RE+IVR
Sbjct: 534 EEEKEDALCLHSEKAAIAFGIMSLKEDVPIRIVKNLRVCGDCHQVSMMISKIFNREIIVR 593
Query: 702 DKTRFHHFKHGSCSCKDYW 720
D+ RFHHFK G CSC +W
Sbjct: 594 DRNRFHHFKDGHCSCNGFW 612
Score = 162 bits (411), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 115/441 (26%), Positives = 207/441 (46%), Gaps = 69/441 (15%)
Query: 18 PLISPIETCESMHQLKQIHSQTIKLGLLTNPTVQNKLV-TFCCSEKGDMKYACKVFRKIP 76
P I+ +++ + +++QIH++ G L + + V S+ + YA ++ +
Sbjct: 8 PAIALLDSGITFKEVRQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQILDRSE 67
Query: 77 RPSVCLWNTMIKGYSRIDSHKNGVLIYLDMLKS--DVRPDNYTFPFLLKGFTRDIAVEFG 134
+P++ N+MI+ + + + Y +L S D++PDNYT FL++ T E G
Sbjct: 68 KPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETG 127
Query: 135 KELHCHVLKFGFDSSVFVQNALISTY----CL---------------------------C 163
++H ++ GFD+ VQ LIS Y CL C
Sbjct: 128 LQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARC 187
Query: 164 GEVDMARGIFDVSYKDDVVTWNAMFSGYKRVKQFDETRKLFGEMERKGVLPTSVTIVLVL 223
G+V AR +F+ + D + WNAM SGY +V + E +F M+ +GV V ++ VL
Sbjct: 188 GDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVL 247
Query: 224 SACAKLKDLDVGKRAHRYVKECKIVPNLILENALTDMYAACGEMGFALEIFGNIKNKDVI 283
SAC +L LD G+ AH Y++ KI + L L D+YA CG+M A+E+F ++ K+V
Sbjct: 248 SACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVY 307
Query: 284 SWTAIVTGYINRGQVDMARQYFDQMPERDYVLWTAMIDGYLRVNRFRE-ALTLFREMQTS 342
+W++ + G L +N F E L LF M+
Sbjct: 308 TWSSALNG--------------------------------LAMNGFGEKCLELFSLMKQD 335
Query: 343 NIRPDEFTIVSILTACANLGALELGE-WVKTYIDKNKVKNDIFVGNALIDMYCKCGDVEK 401
+ P+ T VS+L C+ +G ++ G+ + ++ ++ + L+D+Y + G +E
Sbjct: 336 GVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLED 395
Query: 402 AQRVFREM-LRKDKFTWTAMI 421
A + ++M ++ W++++
Sbjct: 396 AVSIIQQMPMKPHAAVWSSLL 416
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 471 bits (1213), Expect = e-132, Method: Compositional matrix adjust.
Identities = 252/723 (34%), Positives = 399/723 (55%), Gaps = 36/723 (4%)
Query: 1 MFSNSSISPPSTLTQETPLISPIETCESMHQLKQIHSQTIKLGLLTNP--TVQNKLVTFC 58
M +SS + P +T T L+ + + Q+H+ +KLG TNP TV N L+
Sbjct: 136 MCRSSSCTLPDHVTF-TTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSY 194
Query: 59 CSEKGDMKYACKVFRKIPRPSVCLWNTMIKGYSRIDSHKNGVLIYLDMLKSDVRPDNYTF 118
C E + AC +F +IP +NT+I GY + + + ++L M +S +P ++TF
Sbjct: 195 C-EVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTF 253
Query: 119 PFLLKGFTRDIAVEFGKELHCHVLKFGFDSSVFVQNALISTYCLCGEVDMARGIFDVSYK 178
+LK G++LH + GF V N ++ Y V R +FD +
Sbjct: 254 SGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPE 313
Query: 179 DDVVTWNAMFSGYKRVKQFDETRKLFGEMERKGVLPTSVTIVLVLSACAKLKDLDVGKRA 238
D V++N + S Y + Q++ + F EM+ G + +LS A L L +G++
Sbjct: 314 LDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQL 373
Query: 239 HRYVKECKIVPNLILENALTDMYAACGEMGFALEIFGNIKNKDVISWTAIVTGYINRGQV 298
H L + N+L DMYA C E+F
Sbjct: 374 HCQALLATADSILHVGNSLVDMYAKC-------EMF------------------------ 402
Query: 299 DMARQYFDQMPERDYVLWTAMIDGYLRVNRFREALTLFREMQTSNIRPDEFTIVSILTAC 358
+ A F +P+R V WTA+I GY++ L LF +M+ SN+R D+ T ++L A
Sbjct: 403 EEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKAS 462
Query: 359 ANLGALELGEWVKTYIDKNKVKNDIFVGNALIDMYCKCGDVEKAQRVFREMLRKDKFTWT 418
A+ +L LG+ + +I ++ ++F G+ L+DMY KCG ++ A +VF EM ++ +W
Sbjct: 463 ASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWN 522
Query: 419 AMIVGLAINGHGDKSLDMFSQMLRASIIPDEVTYVGVLSACTHTGMVDEGREYFADMTIQ 478
A+I A NG G+ ++ F++M+ + + PD V+ +GVL+AC+H G V++G EYF M+
Sbjct: 523 ALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPI 582
Query: 479 HGIEPNEAHYGCMVDLLGRAGHLNEALEVIKNMPMKPNSIVWGALLGACRVHRDAEMAEM 538
+GI P + HY CM+DLLGR G EA +++ MP +P+ I+W ++L ACR+H++ +AE
Sbjct: 583 YGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAER 642
Query: 539 AAKQILELDP-DNEAVYVLLCNIYAACNRWDNFRELRQMILDRGIKKTPGCSMIEMNGVV 597
AA+++ ++ + A YV + NIYAA W+ R++++ + +RGIKK P S +E+N +
Sbjct: 643 AAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKI 702
Query: 598 HEFVAGDKSHPQTKEIYLKLDEMTSDLKFVGYMPDISEVFLDVGEEDKERAVYQHSEKLA 657
H F + D++HP EI K++E+T++++ GY PD S V DV E+ K ++ HSE+LA
Sbjct: 703 HVFSSNDQTHPNGDEIVRKINELTAEIEREGYKPDTSSVVQDVDEQMKIESLKYHSERLA 762
Query: 658 MAFGLISSGPGVTIRIVKNLRMCVDCHRMAKLVSMVYDREVIVRDKTRFHHFKHGSCSCK 717
+AF LIS+ G I ++KNLR C DCH KL+S + RE+ VRD +RFHHF G CSC
Sbjct: 763 VAFALISTPEGCPIVVMKNLRACRDCHAAIKLISKIVKREITVRDTSRFHHFSEGVCSCG 822
Query: 718 DYW 720
DYW
Sbjct: 823 DYW 825
Score = 197 bits (501), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 136/509 (26%), Positives = 238/509 (46%), Gaps = 43/509 (8%)
Query: 63 GDMKYACKVFRKIPRPSVCLWNTMIKGYSRIDSHKNGVLIYLDMLKSD--VRPDNYTFPF 120
GD+ A +F +P +V W ++ Y+R ++ M +S PD+ TF
Sbjct: 93 GDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTT 152
Query: 121 LLKGFTRDIAVEFGKELHCHVLKFGFDSSVF--VQNALISTYCLCGEVDMARGIFDVSYK 178
LL G + ++H +K GFD++ F V N L+ +YC +D+A +F+ +
Sbjct: 153 LLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPE 212
Query: 179 DDVVTWNAMFSGYKRVKQFDETRKLFGEMERKGVLPTSVTIVLVLSACAKLKDLDVGKRA 238
D VT+N + +GY++ + E+ LF +M + G P+ T VL A L D +G++
Sbjct: 213 KDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQL 272
Query: 239 HRYVKECKIVPNLILENALTDMYAACGEMGFALEIFGNIKNKDVISWTAIVTGYINRGQV 298
H A GF+ +D I+ Y +V
Sbjct: 273 H----------------------ALSVTTGFS---------RDASVGNQILDFYSKHDRV 301
Query: 299 DMARQYFDQMPERDYVLWTAMIDGYLRVNRFREALTLFREMQTSNIRPDEFTIVSILTAC 358
R FD+MPE D+V + +I Y + +++ +L FREMQ F ++L+
Sbjct: 302 LETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIA 361
Query: 359 ANLGALELGEWVKTYIDKNKVKNDIFVGNALIDMYCKCGDVEKAQRVFREMLRKDKFTWT 418
ANL +L++G + + + VGN+L+DMY KC E+A+ +F+ + ++ +WT
Sbjct: 362 ANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWT 421
Query: 419 AMIVGLAINGHGDKSLDMFSQMLRASIIPDEVTYVGVLSACTHTGMVDEGREYFADMTIQ 478
A+I G G L +F++M +++ D+ T+ VL A + G++ A I+
Sbjct: 422 ALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHA-FIIR 480
Query: 479 HGIEPNEAHYGCMVDLLGRAGHLNEALEVIKNMPMKPNSIVWGALLGACRVHRDAEMAEM 538
G N +VD+ + G + +A++V + MP + N++ W AL+ A + D E A
Sbjct: 481 SGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDR-NAVSWNALISAHADNGDGEAAIG 539
Query: 539 AAKQILE--LDPDNEAVYVLLCNIYAACN 565
A +++E L PD+ V + + AC+
Sbjct: 540 AFAKMIESGLQPDS----VSILGVLTACS 564
Score = 110 bits (276), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 90/408 (22%), Positives = 172/408 (42%), Gaps = 30/408 (7%)
Query: 135 KELHCHVLKFGFDSSVFVQNALISTYCLCGEVDMARGIFDVSYKDDVVTWNAMFSGYKRV 194
+ + ++K GFD+ N ++ G+V AR ++D + V+ N M SG+ +
Sbjct: 33 RRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKT 92
Query: 195 KQFDETRKLFGEMERKGVLPTSVTIVLVLSACAKLKDLDVGKRAHR------------YV 242
R LF M + V VT +++ A+ D + R +V
Sbjct: 93 GDVSSARDLFDAMPDRTV----VTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHV 148
Query: 243 KECKIVP---NLILENALTDMYAACGEMGFALEIFGNIKNKDVISWTAIVTGYINRGQVD 299
++P + + +NA+ ++A ++GF F + N ++ Y ++D
Sbjct: 149 TFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSN-------VLLKSYCEVRRLD 201
Query: 300 MARQYFDQMPERDYVLWTAMIDGYLRVNRFREALTLFREMQTSNIRPDEFTIVSILTACA 359
+A F+++PE+D V + +I GY + + E++ LF +M+ S +P +FT +L A
Sbjct: 202 LACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVV 261
Query: 360 NLGALELGEWVKTYIDKNKVKNDIFVGNALIDMYCKCGDVEKAQRVFREMLRKDKFTWTA 419
L LG+ + D VGN ++D Y K V + + +F EM D ++
Sbjct: 262 GLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNV 321
Query: 420 MIVGLAINGHGDKSLDMFSQMLRASIIPDEVTYVGVLSACTHTGMVDEGREYFADMTIQH 479
+I + + SL F +M + +LS + + GR+ +
Sbjct: 322 VISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALL-- 379
Query: 480 GIEPNEAHYG-CMVDLLGRAGHLNEALEVIKNMPMKPNSIVWGALLGA 526
+ H G +VD+ + EA + K++P + ++ W AL+
Sbjct: 380 ATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQR-TTVSWTALISG 426
>sp|Q9CAY1|PP223_ARATH Putative pentatricopeptide repeat-containing protein At3g11460
OS=Arabidopsis thaliana GN=PCMP-H52 PE=3 SV=1
Length = 623
Score = 469 bits (1208), Expect = e-131, Method: Compositional matrix adjust.
Identities = 245/641 (38%), Positives = 373/641 (58%), Gaps = 41/641 (6%)
Query: 83 WNTMIKGYSRIDSHKNGVLIYLDMLKSDVRPDNYTFPFLLKGFTRDIAVEFGKELHCHVL 142
WN ++ + + +Y ML+S PD ++FPF+LK G++LHCHV
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 143 KFGFDSSVFVQNALISTYCLCGEVDMARGIFDVSYKDD--VVTWNAMFSGYKRVKQFDET 200
K G ++ FV ALIS YC CG V AR +F+ + + V +NA+ SGY + +
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 201 RKLFGEMERKGVLPTSVTIVLVLSACAKLKDLDVGKRAHRYVKECKIVPNLILENALTDM 260
+F M+ GV SVT++ ++ C + L +G+ H
Sbjct: 141 AYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLH--------------------- 179
Query: 261 YAACGEMGFALEIFGNIKNKDVISWTAIVTGYINRGQVDMARQYFDQMPERDYVLWTAMI 320
C + G + +V + +T Y+ G V+ R+ FD+MP + + W A+I
Sbjct: 180 -GQCVKGGL---------DSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVI 229
Query: 321 DGYLRVNRFREALTLFREMQTSNIRPDEFTIVSILTACANLGALELGEWVKTYIDKNKVK 380
GY + + L L+ +M++S + PD FT+VS+L++CA+LGA ++G V ++ N
Sbjct: 230 SGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFV 289
Query: 381 NDIFVGNALIDMYCKCGDVEKAQRVFREMLRKDKFTWTAMIVGLAINGHGDKSLDMFSQM 440
++FV NA I MY +CG++ KA+ VF M K +WTAMI ++G G+ L +F M
Sbjct: 290 PNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDM 349
Query: 441 LRASIIPDEVTYVGVLSACTHTGMVDEGREYFADMTIQHGIEPNEAHYGCMVDLLGRAGH 500
++ I PD +V VLSAC+H+G+ D+G E F M ++ +EP HY C+VDLLGRAG
Sbjct: 350 IKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGR 409
Query: 501 LNEALEVIKNMPMKPNSIVWGALLGACRVHRDAEMAEMAAKQILELDPDNEAVYVLLCNI 560
L+EA+E I++MP++P+ VWGALLGAC++H++ +MAE+A +++E +P+N YVL+ NI
Sbjct: 410 LDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNI 469
Query: 561 YAACNRWDNFRELRQMILDRGIKKTPGCSMIEMNGVVHEFVAGDKSHPQTKEIYLKLDEM 620
Y+ + +R M+ +R +K PG S +E G VH F+AGD+SH QT+E++ LDE+
Sbjct: 470 YSDSKNQEGIWRIRVMMRERAFRKKPGYSYVEHKGRVHLFLAGDRSHEQTEEVHRMLDEL 529
Query: 621 -TSDLKFVGYMPDISEVFLDVGEEDKERAVYQHSEKLAMAFGLISSGPGVTIRIVKNLRM 679
TS ++ G M D GEE +HSE+LA+AFG+++S PG I ++KNLR+
Sbjct: 530 ETSVMELAGNMD------CDRGEE-VSSTTREHSERLAIAFGILNSIPGTEILVIKNLRV 582
Query: 680 CVDCHRMAKLVSMVYDREVIVRDKTRFHHFKHGSCSCKDYW 720
C DCH K VS + DR+ +VRD +RFH+FK G CSCKDYW
Sbjct: 583 CEDCHVFLKQVSKIVDRQFVVRDASRFHYFKDGVCSCKDYW 623
Score = 158 bits (399), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 121/448 (27%), Positives = 206/448 (45%), Gaps = 45/448 (10%)
Query: 18 PLISPIETCESMH---QLKQIHSQTIKLGLLTNPTVQNKLVTFCCSEKGDMKYACKVFRK 74
P I +++C S+ +Q+H K G T P V L++ C + G + A KVF +
Sbjct: 57 PFI--LKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALISMYC-KCGLVADARKVFEE 113
Query: 75 IPRP---SVCLWNTMIKGYSRIDSHKNGVLIYLDMLKSDVRPDNYTFPFLLKGFTRDIAV 131
P+ SVC +N +I GY+ + ++ M ++ V D+ T L+ T +
Sbjct: 114 NPQSSQLSVC-YNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYL 172
Query: 132 EFGKELHCHVLKFGFDSSVFVQNALISTYCLCGEVDMARGIFDVSYKDDVVTWNAMFSGY 191
G+ LH +K G DS V V N+ I+ Y CG V+ R +FD ++TWNA+ SGY
Sbjct: 173 WLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGY 232
Query: 192 KRVKQFDETRKLFGEMERKGVLPTSVTIVLVLSACAKLKDLDVGKRAHRYVKECKIVPNL 251
+ + +L+ +M+ GV P T+V VLS+CA L +G + V+ VPN+
Sbjct: 233 SQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNV 292
Query: 252 ILENALTDMYAACGEMGFALEIFGNIKNKDVISWTAIVTGYINRGQVDMARQYFDQMPER 311
+ NA MYA CG + A +F + K ++SWTA++ Y G ++ FD M +R
Sbjct: 293 FVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKR 352
Query: 312 DYVLWTAMIDGYLRVNRFREALTLFREMQTSNIRPDEFTIVSILTACANLGALELG-EWV 370
IRPD V +L+AC++ G + G E
Sbjct: 353 -------------------------------GIRPDGAVFVMVLSACSHSGLTDKGLELF 381
Query: 371 KTYIDKNKVKNDIFVGNALIDMYCKCGDVEKAQRVFREM-LRKDKFTWTAMIVGLAINGH 429
+ + K++ + L+D+ + G +++A M + D W A++ I+ +
Sbjct: 382 RAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKN 441
Query: 430 GDKSLDMFSQMLRASIIPDEVTYVGVLS 457
D + F++++ P+ + Y ++S
Sbjct: 442 VDMAELAFAKVIEFE--PNNIGYYVLMS 467
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 469 bits (1208), Expect = e-131, Method: Compositional matrix adjust.
Identities = 243/738 (32%), Positives = 400/738 (54%), Gaps = 69/738 (9%)
Query: 19 LISPIETCESMHQLKQIHSQTIKLGLLTNPTVQNKLVTFCCSEKGDMKYACKVFRKIPRP 78
LI +S Q KQ+H+Q I+ L++ + +V + + A +F+ + P
Sbjct: 11 LIKNPTRIKSKSQAKQLHAQFIRTQSLSHTSAS--IVISIYTNLKLLHEALLLFKTLKSP 68
Query: 79 SVCLWNTMIKGYSRIDSHKNGVLIYLDMLKSDVRPDNYTFPFLLKGFTRDIAVEFGKELH 138
V W ++I+ ++ + +++M S PD+ FP +LK T + + FG+ +H
Sbjct: 69 PVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVH 128
Query: 139 CHVLKFGFDSSVFVQNALISTYC-LCG--------------------------------- 164
+++ G D ++ NAL++ Y L G
Sbjct: 129 GFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIM 188
Query: 165 --EVDMARGIFDVSYKDDVVTWNAMFSGYKRVKQFDETRKLFGEMERKGVLPTSVTIVLV 222
+D R +F+V + DVV++N + +GY + +++ ++ EM + P S T+ V
Sbjct: 189 PFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSV 248
Query: 223 LSACAKLKDLDVGKRAHRYVKECKIVPNLILENALTDMYAACGEMGFALEIFGNIKNKDV 282
L ++ D+ GK H YV I ++ + ++L DMYA
Sbjct: 249 LPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYA-------------------- 288
Query: 283 ISWTAIVTGYINRGQVDMARQYFDQMPERDYVLWTAMIDGYLRVNRFREALTLFREMQTS 342
+++ + + F ++ RD + W +++ GY++ R+ EAL LFR+M T+
Sbjct: 289 -----------KSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTA 337
Query: 343 NIRPDEFTIVSILTACANLGALELGEWVKTYIDKNKVKNDIFVGNALIDMYCKCGDVEKA 402
++P S++ ACA+L L LG+ + Y+ + ++IF+ +AL+DMY KCG+++ A
Sbjct: 338 KVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAA 397
Query: 403 QRVFREMLRKDKFTWTAMIVGLAINGHGDKSLDMFSQMLRASIIPDEVTYVGVLSACTHT 462
+++F M D+ +WTA+I+G A++GHG +++ +F +M R + P++V +V VL+AC+H
Sbjct: 398 RKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHV 457
Query: 463 GMVDEGREYFADMTIQHGIEPNEAHYGCMVDLLGRAGHLNEALEVIKNMPMKPNSIVWGA 522
G+VDE YF MT +G+ HY + DLLGRAG L EA I M ++P VW
Sbjct: 458 GLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWST 517
Query: 523 LLGACRVHRDAEMAEMAAKQILELDPDNEAVYVLLCNIYAACNRWDNFRELRQMILDRGI 582
LL +C VH++ E+AE A++I +D +N YVL+CN+YA+ RW +LR + +G+
Sbjct: 518 LLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGL 577
Query: 583 KKTPGCSMIEMNGVVHEFVAGDKSHPQTKEIYLKLDEMTSDLKFVGYMPDISEVFLDVGE 642
+K P CS IEM H FV+GD+SHP +I L + ++ GY+ D S V DV E
Sbjct: 578 RKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDE 637
Query: 643 EDKERAVYQHSEKLAMAFGLISSGPGVTIRIVKNLRMCVDCHRMAKLVSMVYDREVIVRD 702
E K ++ HSE+LA+AFG+I++ PG TIR+ KN+R+C DCH K +S + +RE+IVRD
Sbjct: 638 EHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRD 697
Query: 703 KTRFHHFKHGSCSCKDYW 720
+RFHHF G+CSC DYW
Sbjct: 698 NSRFHHFNRGNCSCGDYW 715
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis
thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 469 bits (1207), Expect = e-131, Method: Compositional matrix adjust.
Identities = 244/688 (35%), Positives = 380/688 (55%), Gaps = 32/688 (4%)
Query: 33 KQIHSQTIKLGLLTNPTVQNKLVTFCCSEKGDMKYACKVFRKIPRPSVCLWNTMIKGYSR 92
+Q+H+ T KLG +N ++ L+ ++ D++ A F + +V LWN M+ Y
Sbjct: 409 QQLHAYTTKLGFASNNKIEGALLNLY-AKCADIETALDYFLETEVENVVLWNVMLVAYGL 467
Query: 93 IDSHKNGVLIYLDMLKSDVRPDNYTFPFLLKGFTRDIAVEFGKELHCHVLKFGFDSSVFV 152
+D +N I+ M ++ P+ YT+P +LK R +E G+++H ++K F + +V
Sbjct: 468 LDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYV 527
Query: 153 QNALISTYCLCGEVDMARGIFDVSYKDDVVTWNAMFSGYKRVKQFDETRKLFGEMERKGV 212
+ LI Y G++D A I DVV+W M +GY + D+ F +M +G+
Sbjct: 528 CSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGI 587
Query: 213 LPTSVTIVLVLSACAKLKDLDVGKRAHRYVKECKIVPNLILENALTDMYAACGEMGFALE 272
V + +SACA L+ L G++ H +L +NAL +Y+ CG++ +
Sbjct: 588 RSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYL 647
Query: 273 IFGNIKNKDVISWTAIVTGYINRGQVDMARQYFDQMPERDYVLWTAMIDGYLRVNRFREA 332
F + D I+W A+V+G+ G + EA
Sbjct: 648 AFEQTEAGDNIAWNALVSGFQQSGNNE-------------------------------EA 676
Query: 333 LTLFREMQTSNIRPDEFTIVSILTACANLGALELGEWVKTYIDKNKVKNDIFVGNALIDM 392
L +F M I + FT S + A + ++ G+ V I K ++ V NALI M
Sbjct: 677 LRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISM 736
Query: 393 YCKCGDVEKAQRVFREMLRKDKFTWTAMIVGLAINGHGDKSLDMFSQMLRASIIPDEVTY 452
Y KCG + A++ F E+ K++ +W A+I + +G G ++LD F QM+ +++ P+ VT
Sbjct: 737 YAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTL 796
Query: 453 VGVLSACTHTGMVDEGREYFADMTIQHGIEPNEAHYGCMVDLLGRAGHLNEALEVIKNMP 512
VGVLSAC+H G+VD+G YF M ++G+ P HY C+VD+L RAG L+ A E I+ MP
Sbjct: 797 VGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMP 856
Query: 513 MKPNSIVWGALLGACRVHRDAEMAEMAAKQILELDPDNEAVYVLLCNIYAACNRWDNFRE 572
+KP+++VW LL AC VH++ E+ E AA +LEL+P++ A YVLL N+YA +WD
Sbjct: 857 IKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDL 916
Query: 573 LRQMILDRGIKKTPGCSMIEMNGVVHEFVAGDKSHPQTKEIYLKLDEMTSDLKFVGYMPD 632
RQ + ++G+KK PG S IE+ +H F GD++HP EI+ ++T +GY+ D
Sbjct: 917 TRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQD 976
Query: 633 ISEVFLDVGEEDKERAVYQHSEKLAMAFGLISSGPGVTIRIVKNLRMCVDCHRMAKLVSM 692
+ ++ E K+ ++ HSEKLA++FGL+S V I ++KNLR+C DCH K VS
Sbjct: 977 CFSLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATVPINVMKNLRVCNDCHAWIKFVSK 1036
Query: 693 VYDREVIVRDKTRFHHFKHGSCSCKDYW 720
V +RE+IVRD RFHHF+ G+CSCKDYW
Sbjct: 1037 VSNREIIVRDAYRFHHFEGGACSCKDYW 1064
Score = 213 bits (543), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 145/505 (28%), Positives = 228/505 (45%), Gaps = 34/505 (6%)
Query: 32 LKQIHSQTIKLGLLTNPTVQNKLVTFCCSEKGDMKYACKVFRKIPRPSVCLWNTMIKGYS 91
++QIH++ + GL + V N L+ S G + A +VF + W MI G S
Sbjct: 206 VEQIHARILYQGLRDSTVVCNPLIDLY-SRNGFVDLARRVFDGLRLKDHSSWVAMISGLS 264
Query: 92 RIDSHKNGVLIYLDMLKSDVRPDNYTFPFLLKGFTRDIAVEFGKELHCHVLKFGFDSSVF 151
+ + + ++ DM + P Y F +L + ++E G++LH VLK GF S +
Sbjct: 265 KNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTY 324
Query: 152 VQNALISTYCLCGEVDMARGIFDVSYKDDVVTWNAMFSGYKRVKQFDETRKLFGEMERKG 211
V NAL+S Y G + A IF + D VT+N + +G + ++ +LF M G
Sbjct: 325 VCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDG 384
Query: 212 VLPTSVTIVLVLSACAKLKDLDVGKRAHRYVKECKIVPNLILENALTDMYAACGEMGFAL 271
+ P S T+ ++ AC+ L G++ H Y + N +E AL ++YA C ++ AL
Sbjct: 385 LEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETAL 444
Query: 272 EIFGNIKNKDVISWTAIVTGYINRGQVDMARQYFDQMPERDYVLWTAMIDGYLRVNRFRE 331
+ F + ++V VLW M+ Y ++ R
Sbjct: 445 DYFLETEVENV-------------------------------VLWNVMLVAYGLLDDLRN 473
Query: 332 ALTLFREMQTSNIRPDEFTIVSILTACANLGALELGEWVKTYIDKNKVKNDIFVGNALID 391
+ +FR+MQ I P+++T SIL C LG LELGE + + I K + + +V + LID
Sbjct: 474 SFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLID 533
Query: 392 MYCKCGDVEKAQRVFREMLRKDKFTWTAMIVGLAINGHGDKSLDMFSQMLRASIIPDEVT 451
MY K G ++ A + KD +WT MI G DK+L F QML I DEV
Sbjct: 534 MYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVG 593
Query: 452 YVGVLSACTHTGMVDEGREYFADMTIQHGIEPNEAHYGCMVDLLGRAGHLNEALEVIKNM 511
+SAC + EG++ A + G + +V L R G + E+ +
Sbjct: 594 LTNAVSACAGLQALKEGQQIHAQACVS-GFSSDLPFQNALVTLYSRCGKIEESYLAFEQT 652
Query: 512 PMKPNSIVWGALLGACRVHRDAEMA 536
N I W AL+ + + E A
Sbjct: 653 EAGDN-IAWNALVSGFQQSGNNEEA 676
Score = 202 bits (515), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 134/550 (24%), Positives = 260/550 (47%), Gaps = 38/550 (6%)
Query: 17 TPLISPIETCESMHQLKQIHSQTIKLGLLTNPTVQNKLVTFCCSEKGDMKYACKVFRKIP 76
+ ++S + ES+ +Q+H +KLG ++ V N LV+ G++ A +F +
Sbjct: 292 SSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYF-HLGNLISAEHIFSNMS 350
Query: 77 RPSVCLWNTMIKGYSRIDSHKNGVLIYLDMLKSDVRPDNYTFPFLLKGFTRDIAVEFGKE 136
+ +NT+I G S+ + + ++ M + PD+ T L+ + D + G++
Sbjct: 351 QRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQ 410
Query: 137 LHCHVLKFGFDSSVFVQNALISTYCLCGEVDMARGIFDVSYKDDVVTWNAMFSGYKRVKQ 196
LH + K GF S+ ++ AL++ Y C +++ A F + ++VV WN M Y +
Sbjct: 411 LHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDD 470
Query: 197 FDETRKLFGEMERKGVLPTSVTIVLVLSACAKLKDLDVGKRAHRYVKECKIVPNLILENA 256
+ ++F +M+ + ++P T +L C +L DL++G++ H + + N + +
Sbjct: 471 LRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSV 530
Query: 257 LTDMYAACGEMGFALEIFGNIKNKDVISWTAIVTGYINRGQVDMARQY-FDQMPERDYVL 315
L DMYA G++ A +I KDV+SWT ++ GY QY FD
Sbjct: 531 LIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYT---------QYNFDD-------- 573
Query: 316 WTAMIDGYLRVNRFREALTLFREMQTSNIRPDEFTIVSILTACANLGALELGEWVKTYID 375
+ALT FR+M IR DE + + ++ACA L AL+ G+ +
Sbjct: 574 ---------------KALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQAC 618
Query: 376 KNKVKNDIFVGNALIDMYCKCGDVEKAQRVFREMLRKDKFTWTAMIVGLAINGHGDKSLD 435
+ +D+ NAL+ +Y +CG +E++ F + D W A++ G +G+ +++L
Sbjct: 619 VSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALR 678
Query: 436 MFSQMLRASIIPDEVTYVGVLSACTHTGMVDEGREYFADMTIQHGIEPNEAHYGCMVDLL 495
+F +M R I + T+ + A + T + +G++ A +T + G + ++ +
Sbjct: 679 VFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVIT-KTGYDSETEVCNALISMY 737
Query: 496 GRAGHLNEALEVIKNMPMKPNSIVWGALLGACRVHRDAEMAEMAAKQILELDPDNEAVYV 555
+ G +++A + + K N + W A++ A H A + Q++ + +V
Sbjct: 738 AKCGSISDAEKQFLEVSTK-NEVSWNAIINAYSKHGFGSEALDSFDQMIH--SNVRPNHV 794
Query: 556 LLCNIYAACN 565
L + +AC+
Sbjct: 795 TLVGVLSACS 804
Score = 200 bits (508), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 145/568 (25%), Positives = 262/568 (46%), Gaps = 37/568 (6%)
Query: 10 PSTLTQETPLISPIETCESMHQLKQIHSQTIKLGLLTNPTVQNKLVTFCCSEKGDMKYAC 69
P+ T + L ++T S+ + +++HSQ +KLGL +N + KL F KGD+ A
Sbjct: 82 PNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLF-KGDLYGAF 140
Query: 70 KVFRKIPRPSVCLWNTMIKGYSRIDSHKNGVLIYLDMLKSDVRPDNYTFPFLLKGFTR-D 128
KVF ++P ++ WN MIK + + +++ M+ +V P+ TF +L+
Sbjct: 141 KVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGS 200
Query: 129 IAVEFGKELHCHVLKFGFDSSVFVQNALISTYCLCGEVDMARGIFDVSYKDDVVTWNAMF 188
+A + +++H +L G S V N LI Y G VD+AR +FD D +W AM
Sbjct: 201 VAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMI 260
Query: 189 SGYKRVKQFDETRKLFGEMERKGVLPTSVTIVLVLSACAKLKDLDVGKRAHRYVKECKIV 248
SG + + E +LF +M G++PT VLSAC K++ L++G++ H V +
Sbjct: 261 SGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFS 320
Query: 249 PNLILENALTDMYAACGEMGFALEIFGNIKNKDVISWTAIVTGYINRGQVDMARQYFDQM 308
+ + NAL +Y G + A IF N+ +D +++ ++ G G +
Sbjct: 321 SDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGE--------- 371
Query: 309 PERDYVLWTAMIDGYLRVNRFREALTLFREMQTSNIRPDEFTIVSILTACANLGALELGE 368
+A+ LF+ M + PD T+ S++ AC+ G L G+
Sbjct: 372 ----------------------KAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQ 409
Query: 369 WVKTYIDKNKVKNDIFVGNALIDMYCKCGDVEKAQRVFREMLRKDKFTWTAMIVGLAING 428
+ Y K ++ + AL+++Y KC D+E A F E ++ W M+V +
Sbjct: 410 QLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLD 469
Query: 429 HGDKSLDMFSQMLRASIIPDEVTYVGVLSACTHTGMVDEGREYFADMTIQHGIEPNEAHY 488
S +F QM I+P++ TY +L C G ++ G + + + I+ + N
Sbjct: 470 DLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQI-IKTNFQLNAYVC 528
Query: 489 GCMVDLLGRAGHLNEALEVIKNMPMKPNSIVWGALLGACRVHRDAEMAEMAAKQILELDP 548
++D+ + G L+ A +++ K + + W ++ + + A +Q+L+
Sbjct: 529 SVLIDMYAKLGKLDTAWDILIRFAGK-DVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGI 587
Query: 549 DNEAVYVLLCNIYAACNRWDNFRELRQM 576
++ V L N +AC +E +Q+
Sbjct: 588 RSDEVG--LTNAVSACAGLQALKEGQQI 613
Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/375 (25%), Positives = 159/375 (42%), Gaps = 43/375 (11%)
Query: 195 KQFDETRKLFGEMERKGVLPTSVTIVLVLSACAKLK-DLDVGKRAHRYVKECKIVPNLIL 253
+ F E R +E +G+ P T+ +L C K LD G++ H + + + N L
Sbjct: 65 ESFQEKR--IDSVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCL 122
Query: 254 ENALTDMYAACGEMGFALEIFGNIKNKDVISWTAIVTGYINRGQVDMARQYFDQMPERDY 313
L D Y G++ A ++F D+MPER
Sbjct: 123 SEKLFDFYLFKGDLYGAFKVF-------------------------------DEMPERTI 151
Query: 314 VLWTAMIDGYLRVNRFREALTLFREMQTSNIRPDEFTIVSILTACANLG-ALELGEWVKT 372
W MI N E LF M + N+ P+E T +L AC A ++ E +
Sbjct: 152 FTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHA 211
Query: 373 YIDKNKVKNDIFVGNALIDMYCKCGDVEKAQRVFREMLRKDKFTWTAMIVGLAINGHGDK 432
I +++ V N LID+Y + G V+ A+RVF + KD +W AMI GL+ N +
Sbjct: 212 RILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAE 271
Query: 433 SLDMFSQMLRASIIPDEVTYVGVLSACTHTGMVDEGREYFADMTIQHGIEPNEAHYGCMV 492
++ +F M I+P + VLSAC ++ G E + ++ G + +V
Sbjct: 272 AIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIG-EQLHGLVLKLGFSSDTYVCNALV 330
Query: 493 DLLGRAGHLNEALEVIKNMPMKPNSIVWGALL-GACRVHRDAEMAEMAAKQILE-LDPDN 550
L G+L A + NM + +++ + L+ G + + E+ + L+ L+PD+
Sbjct: 331 SLYFHLGNLISAEHIFSNMSQR-DAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDS 389
Query: 551 EAVYVLLCNIYAACN 565
L ++ AC+
Sbjct: 390 NT----LASLVVACS 400
Score = 107 bits (267), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 114/226 (50%), Gaps = 6/226 (2%)
Query: 14 TQETPLISPIETCESMHQLK---QIHSQTIKLGLLTNPTVQNKLVTFCCSEKGDMKYACK 70
+ E L + + C + LK QIH+Q G ++ QN LVT S G ++ +
Sbjct: 589 SDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTL-YSRCGKIEESYL 647
Query: 71 VFRKIPRPSVCLWNTMIKGYSRIDSHKNGVLIYLDMLKSDVRPDNYTFPFLLKGFTRDIA 130
F + WN ++ G+ + +++ + +++ M + + +N+TF +K +
Sbjct: 648 AFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETAN 707
Query: 131 VEFGKELHCHVLKFGFDSSVFVQNALISTYCLCGEV-DMARGIFDVSYKDDVVTWNAMFS 189
++ GK++H + K G+DS V NALIS Y CG + D + +VS K++ V+WNA+ +
Sbjct: 708 MKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNE-VSWNAIIN 766
Query: 190 GYKRVKQFDETRKLFGEMERKGVLPTSVTIVLVLSACAKLKDLDVG 235
Y + E F +M V P VT+V VLSAC+ + +D G
Sbjct: 767 AYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKG 812
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 469 bits (1207), Expect = e-131, Method: Compositional matrix adjust.
Identities = 253/731 (34%), Positives = 406/731 (55%), Gaps = 57/731 (7%)
Query: 10 PSTLTQETPLISPIETC------ESMHQLKQIHSQTIKLGLLTNPTVQNKLVTFCCSEKG 63
PS+ T L+S + C E + KQ+H+ ++ G L N + N LV + G
Sbjct: 197 PSSFT----LVSVVTACSNLPMPEGLMMGKQVHAYGLRKGEL-NSFIINTLVAMY-GKLG 250
Query: 64 DMKYACKVFRKIPRPSVCLWNTMIKGYSRIDSHKNGVLIYLDMLKSDVRPDNYTFPFLLK 123
+ + + + WNT++ + + + +M+ V PD +T +L
Sbjct: 251 KLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLP 310
Query: 124 GFTRDIAVEFGKELHCHVLKFG-FDSSVFVQNALISTYCLCGEVDMARGIFDVSYKDDVV 182
+ + GKELH + LK G D + FV +AL+ YC C +V R +FD + +
Sbjct: 311 ACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIG 370
Query: 183 TWNAMFSGYKRVKQFDETRKLF-GEMERKGVLPTSVTIVLVLSACAKLKDLDVGKRAHRY 241
WNAM +GY + + E LF G E G+L S T+ V+ AC + + H +
Sbjct: 371 LWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGF 430
Query: 242 VKECKIVPNLILENALTDMYAACGEMGFALEIFGNIKNKDVISWTAIVTGYINRGQVDMA 301
V + + + ++N L DMY+ G ++D+A
Sbjct: 431 VVKRGLDRDRFVQNTLMDMYSRLG-------------------------------KIDIA 459
Query: 302 RQYFDQMPERDYVLWTAMIDGYLRVNRFREALTLFREMQT-----------SNIRPDEFT 350
+ F +M +RD V W MI GY+ +AL L +MQ +++P+ T
Sbjct: 460 MRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSIT 519
Query: 351 IVSILTACANLGALELGEWVKTYIDKNKVKNDIFVGNALIDMYCKCGDVEKAQRVFREML 410
+++IL +CA L AL G+ + Y KN + D+ VG+AL+DMY KCG ++ +++VF ++
Sbjct: 520 LMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIP 579
Query: 411 RKDKFTWTAMIVGLAINGHGDKSLDMFSQMLRASIIPDEVTYVGVLSACTHTGMVDEGRE 470
+K+ TW +I+ ++G+G +++D+ M+ + P+EVT++ V +AC+H+GMVDEG
Sbjct: 580 QKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLR 639
Query: 471 YFADMTIQHGIEPNEAHYGCMVDLLGRAGHLNEALEVIKNMPMKPNSI-VWGALLGACRV 529
F M +G+EP+ HY C+VDLLGRAG + EA +++ MP N W +LLGA R+
Sbjct: 640 IFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRI 699
Query: 530 HRDAEMAEMAAKQILELDPDNEAVYVLLCNIYAACNRWDNFRELRQMILDRGIKKTPGCS 589
H + E+ E+AA+ +++L+P+ + YVLL NIY++ WD E+R+ + ++G++K PGCS
Sbjct: 700 HNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCS 759
Query: 590 MIEMNGVVHEFVAGDKSHPQTKEIYLKLDEMTSDLKFVGYMPDISEVFLDVGEEDKERAV 649
IE VH+FVAGD SHPQ++++ L+ + ++ GY+PD S V +V E++KE +
Sbjct: 760 WIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILL 819
Query: 650 YQHSEKLAMAFGLISSGPGVTIRIVKNLRMCVDCHRMAKLVSMVYDREVIVRDKTRFHHF 709
HSEKLA+AFG++++ PG IR+ KNLR+C DCH K +S + DRE+I+RD RFH F
Sbjct: 820 CGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRF 879
Query: 710 KHGSCSCKDYW 720
K+G+CSC DYW
Sbjct: 880 KNGTCSCGDYW 890
Score = 203 bits (516), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 127/449 (28%), Positives = 221/449 (49%), Gaps = 42/449 (9%)
Query: 83 WNTMIKGYSRIDSHKNGVLIYLDMLKSDVRPDNYTFPFLLKGFTRDIAVEFGKELHCHVL 142
W +++ R + + VL Y+DM+ ++PDNY FP LLK +E GK++H HV
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 143 KFGFD-SSVFVQNALISTYCLCGEVDMARGIFDVSYKDDVVTWNAMFSGYKRVKQFDETR 201
KFG+ SV V N L++ Y CG+ +FD + + V+WN++ S ++++
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 202 KLFGEMERKGVLPTSVTIVLVLSACAKL---KDLDVGKRAHRY-VKECKIVPNLILENAL 257
+ F M + V P+S T+V V++AC+ L + L +GK+ H Y +++ ++ N + N L
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGEL--NSFIINTL 242
Query: 258 TDMYAACGEMGFALEIFGNIKNKDVISWTAIVTGYINRGQVDMARQYFDQMPERDYVLWT 317
MY G++ + + G+ +D+++W +++ Q+
Sbjct: 243 VAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQL------------------- 283
Query: 318 AMIDGYLRVNRFREALTLFREMQTSNIRPDEFTIVSILTACANLGALELGEWVKTYIDKN 377
EAL REM + PDEFTI S+L AC++L L G+ + Y KN
Sbjct: 284 ------------LEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKN 331
Query: 378 -KVKNDIFVGNALIDMYCKCGDVEKAQRVFREMLRKDKFTWTAMIVGLAINGHGDKSLDM 436
+ + FVG+AL+DMYC C V +RVF M + W AMI G + N H ++L +
Sbjct: 332 GSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLL 391
Query: 437 FSQMLR-ASIIPDEVTYVGVLSACTHTGMVDEGREYFADMTIQHGIEPNEAHYGCMVDLL 495
F M A ++ + T GV+ AC +G +E ++ G++ + ++D+
Sbjct: 392 FIGMEESAGLLANSTTMAGVVPACVRSGAFSR-KEAIHGFVVKRGLDRDRFVQNTLMDMY 450
Query: 496 GRAGHLNEALEVIKNMPMKPNSIVWGALL 524
R G ++ A+ + M + + + W ++
Sbjct: 451 SRLGKIDIAMRIFGKMEDR-DLVTWNTMI 478
Score = 194 bits (492), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 151/565 (26%), Positives = 260/565 (46%), Gaps = 56/565 (9%)
Query: 19 LISPIETCESMHQLKQIHSQTIKLGL-LTNPTVQNKLVTFCCSEKGDMKYACKVFRKIPR 77
L+ + + M KQIH+ K G + + TV N LV + GD KVF +I
Sbjct: 103 LLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLY-RKCGDFGAVYKVFDRISE 161
Query: 78 PSVCLWNTMIKGYSRIDSHKNGVLIYLDMLKSDVRPDNYTFPFLLKGFTRDIAVE---FG 134
+ WN++I + + + + ML +V P ++T ++ + E G
Sbjct: 162 RNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMG 221
Query: 135 KELHCHVLKFGFDSSVFVQNALISTYCLCGEVDMARGIFDVSYKDDVVTWNAMFSGYKRV 194
K++H + L+ G + + F+ N L++ Y G++ ++ + D+VTWN + S +
Sbjct: 222 KQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQN 280
Query: 195 KQFDETRKLFGEMERKGVLPTSVTIVLVLSACAKLKDLDVGKRAHRY-VKECKIVPNLIL 253
+Q E + EM +GV P TI VL AC+ L+ L GK H Y +K + N +
Sbjct: 281 EQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFV 340
Query: 254 ENALTDMYAACGEMGFALEIFGNIKNKDVISWTAIVTGYINRGQVDMARQYFDQMPERDY 313
+AL DMY C K V+S R+ FD M +R
Sbjct: 341 GSALVDMYCNC---------------KQVLS----------------GRRVFDGMFDRKI 369
Query: 314 VLWTAMIDGYLRVNRFREALTLFREMQTS-NIRPDEFTIVSILTACANLGALELGEWVKT 372
LW AMI GY + +EAL LF M+ S + + T+ ++ AC GA E +
Sbjct: 370 GLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHG 429
Query: 373 YIDKNKVKNDIFVGNALIDMYCKCGDVEKAQRVFREMLRKDKFTWTAMIVGLAINGHGDK 432
++ K + D FV N L+DMY + G ++ A R+F +M +D TW MI G + H +
Sbjct: 430 FVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHED 489
Query: 433 SLDMFSQML-----------RASIIPDEVTYVGVLSACTHTGMVDEGREYFADMTIQHGI 481
+L + +M R S+ P+ +T + +L +C + +G+E A I++ +
Sbjct: 490 ALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHA-YAIKNNL 548
Query: 482 EPNEAHYGCMVDLLGRAGHLNEALEVIKNMPMKPNSIVWGALLGACRVHRDAEMA-EMAA 540
+ A +VD+ + G L + +V +P K N I W ++ A +H + + A ++
Sbjct: 549 ATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQK-NVITWNVIIMAYGMHGNGQEAIDLLR 607
Query: 541 KQILELDPDNEAVYVLLCNIYAACN 565
+++ NE ++ +++AAC+
Sbjct: 608 MMMVQGVKPNEVTFI---SVFAACS 629
Score = 87.0 bits (214), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 132/267 (49%), Gaps = 13/267 (4%)
Query: 316 WTAMIDGYLRVNRFREALTLFREMQTSNIRPDEFTIVSILTACANLGALELGEWVKTYID 375
W ++ +R N REA+ + +M I+PD + ++L A A+L +ELG+ + ++
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 376 KNKVKND-IFVGNALIDMYCKCGDVEKAQRVFREMLRKDKFTWTAMIVGLAINGHGDKSL 434
K D + V N L+++Y KCGD +VF + +++ +W ++I L + +L
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 435 DMFSQMLRASIIPDEVTYVGVLSACTHTGMVDE---GREYFADMTIQHGIEPNEAHYGCM 491
+ F ML ++ P T V V++AC++ M + G++ A ++ G E N +
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHA-YGLRKG-ELNSFIINTL 242
Query: 492 VDLLGRAGHLNEALEVIKNMPMKPNSIVWGALLGA-CRVHRDAEMAEMAAKQILE-LDPD 549
V + G+ G L + ++ + + + + W +L + C+ + E E + +LE ++PD
Sbjct: 243 VAMYGKLGKLASSKVLLGSFGGR-DLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPD 301
Query: 550 NEAVYVLLCNIYAACNRWDNFRELRQM 576
+ ++ AC+ + R +++
Sbjct: 302 E----FTISSVLPACSHLEMLRTGKEL 324
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 465 bits (1197), Expect = e-130, Method: Compositional matrix adjust.
Identities = 258/757 (34%), Positives = 403/757 (53%), Gaps = 70/757 (9%)
Query: 33 KQIHSQTIKLGLLTNPTVQNKLVTFCCSEKGDMKYACKVFRKIPRPSVCLWNTMIKGYSR 92
+Q+H Q IK G L + +V LV + + K KVF ++ +V W T+I GY+R
Sbjct: 113 RQLHCQCIKFGFLDDVSVGTSLVD-TYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYAR 171
Query: 93 IDSHKNGVLIYLDMLKSDVRPDNYTFPFLLKGFTRDIAVEFGKELHCHVLKFGFDSSVFV 152
+ + +++ M +P+++TF L + G ++H V+K G D ++ V
Sbjct: 172 NSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPV 231
Query: 153 QNALISTYCLCGEVDMARGIFDVSYKDDVVTWNAMFSGYKRVKQFDETRKLFGEMERKGV 212
N+LI+ Y CG V AR +FD + VVTWN+M SGY E +F M V
Sbjct: 232 SNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYV 291
Query: 213 LPTSVTIVLVLSACAKLKDLDVGKRAH--------------------------------R 240
+ + V+ CA LK+L ++ H R
Sbjct: 292 RLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALR 351
Query: 241 YVKECKIVPNLILENALTDMYAACGEMGFALEIFGNIKNKDV----------------IS 284
KE V N++ A+ + A+++F +K K V IS
Sbjct: 352 LFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVIS 411
Query: 285 -------------------WTAIVTGYINRGQVDMARQYFDQMPERDYVLWTAMIDGYLR 325
TA++ Y+ G+V+ A + F + ++D V W+AM+ GY +
Sbjct: 412 PSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQ 471
Query: 326 VNRFREALTLFREMQTSNIRPDEFTIVSILTACANLGA-LELGEWVKTYIDKNKVKNDIF 384
A+ +F E+ I+P+EFT SIL CA A + G+ + K+++ + +
Sbjct: 472 TGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLC 531
Query: 385 VGNALIDMYCKCGDVEKAQRVFREMLRKDKFTWTAMIVGLAINGHGDKSLDMFSQMLRAS 444
V +AL+ MY K G++E A+ VF+ KD +W +MI G A +G K+LD+F +M +
Sbjct: 532 VSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRK 591
Query: 445 IIPDEVTYVGVLSACTHTGMVDEGREYFADMTIQHGIEPNEAHYGCMVDLLGRAGHLNEA 504
+ D VT++GV +ACTH G+V+EG +YF M I P + H CMVDL RAG L +A
Sbjct: 592 VKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKA 651
Query: 505 LEVIKNMPMKPNSIVWGALLGACRVHRDAEMAEMAAKQILELDPDNEAVYVLLCNIYAAC 564
++VI+NMP S +W +L ACRVH+ E+ +AA++I+ + P++ A YVLL N+YA
Sbjct: 652 MKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAES 711
Query: 565 NRWDNFRELRQMILDRGIKKTPGCSMIEMNGVVHEFVAGDKSHPQTKEIYLKLDEMTSDL 624
W ++R+++ +R +KK PG S IE+ + F+AGD+SHP +IY+KL+++++ L
Sbjct: 712 GDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRL 771
Query: 625 KFVGYMPDISEVFLDVGEEDKERAVYQHSEKLAMAFGLISSGPGVTIRIVKNLRMCVDCH 684
K +GY PD S V D+ +E KE + QHSE+LA+AFGLI++ G + I+KNLR+C DCH
Sbjct: 772 KDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDCH 831
Query: 685 RMAKLVSMVYDREVIVRDKTRFHHFKH-GSCSCKDYW 720
+ KL++ + +RE++VRD RFHHF G CSC D+W
Sbjct: 832 LVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 868
Score = 169 bits (429), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 140/597 (23%), Positives = 247/597 (41%), Gaps = 82/597 (13%)
Query: 41 KLGLLTNPTVQNKLVTFCCSEKGDMKYACKVFRKIPRPSVCLWNTMIKGYSRIDSHKNGV 100
K + N Q ++ F + A +F K P + +++ G+SR +
Sbjct: 19 KFRIYANGVAQVRIYCFGTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAK 78
Query: 101 LIYLDMLKSDVRPDNYTFPFLLKGFTRDIAVEFGKELHCHVLKFGFDSSVFVQNALISTY 160
++L++ + + D F +LK FG++LHC +KFGF V V +L+ TY
Sbjct: 79 RLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTY 138
Query: 161 CLCGEVDMARGIFDVSYKDDVVTWNAMFSGYKRVKQFDETRKLFGEMERKGVLPTSVTIV 220
R +FD + +VVTW + SGY R DE LF M+ +G P S T
Sbjct: 139 MKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFA 198
Query: 221 LVLSACAKLKDLDVGKRAHRYVKECKIVPNLILENALTDMYAACGEMGFALEIFGNIKNK 280
L A+ G + H V + + + + N+L ++Y CG + A +F + K
Sbjct: 199 AALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVK 258
Query: 281 DVISWTAIVTGYINRGQVDMA--------RQYFDQMPERDYV------------------ 314
V++W ++++GY G +D+ R + ++ E +
Sbjct: 259 SVVTWNSMISGYAANG-LDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQL 317
Query: 315 --------------LWTAMIDGYLRVNRFREALTLFRE---------------------- 338
+ TA++ Y + +AL LF+E
Sbjct: 318 HCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDG 377
Query: 339 ----------MQTSNIRPDEFTIVSILTACANLGALEL-GEWVKTYIDKNKVKNDIFVGN 387
M+ +RP+EFT ILTA + E+ + VKT +++ VG
Sbjct: 378 KEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYERSST-----VGT 432
Query: 388 ALIDMYCKCGDVEKAQRVFREMLRKDKFTWTAMIVGLAINGHGDKSLDMFSQMLRASIIP 447
AL+D Y K G VE+A +VF + KD W+AM+ G A G + ++ MF ++ + I P
Sbjct: 433 ALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKP 492
Query: 448 DEVTYVGVLSACTHTGMVDEGREYFADMTIQHGIEPNEAHYGCMVDLLGRAGHLNEALEV 507
+E T+ +L+ C T + F I+ ++ + ++ + + G++ A EV
Sbjct: 493 NEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEV 552
Query: 508 IKNMPMKPNSIVWGALLGACRVHRDAEMAEMAAKQILELDPDNEAVYVLLCNIYAAC 564
K K + + W +++ H A A K++ + + V + ++AAC
Sbjct: 553 FKRQREK-DLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFI--GVFAAC 606
Score = 118 bits (295), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/343 (23%), Positives = 163/343 (47%), Gaps = 17/343 (4%)
Query: 11 STLTQETPLISPIETCESMHQLKQIHSQTIKLGLLTNPTVQNKLVTFCCSEKGDMKYACK 70
S + P+ISP E +H+Q +K + TV L+ + G ++ A K
Sbjct: 401 SVILTALPVISPSE----------VHAQVVKTNYERSSTVGTALLD-AYVKLGKVEEAAK 449
Query: 71 VFRKIPRPSVCLWNTMIKGYSRIDSHKNGVLIYLDMLKSDVRPDNYTFPFLLK-GFTRDI 129
VF I + W+ M+ GY++ + + ++ ++ K ++P+ +TF +L +
Sbjct: 450 VFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNA 509
Query: 130 AVEFGKELHCHVLKFGFDSSVFVQNALISTYCLCGEVDMARGIFDVSYKDDVVTWNAMFS 189
++ GK+ H +K DSS+ V +AL++ Y G ++ A +F + D+V+WN+M S
Sbjct: 510 SMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMIS 569
Query: 190 GYKRVKQFDETRKLFGEMERKGVLPTSVTIVLVLSACAKLKDLDVGKRAHR-YVKECKIV 248
GY + Q + +F EM+++ V VT + V +AC ++ G++ V++CKI
Sbjct: 570 GYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIA 629
Query: 249 PNLILENALTDMYAACGEMGFALEIFGNIKNKDVIS-WTAIVTGYINRGQVDMARQYFDQ 307
P + + D+Y+ G++ A+++ N+ N + W I+ + ++ R ++
Sbjct: 630 PTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEK 689
Query: 308 ---MPERDYVLWTAMIDGYLRVNRFREALTLFREMQTSNIRPD 347
M D + + + Y ++E + + M N++ +
Sbjct: 690 IIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKE 732
>sp|Q8LK93|PP145_ARATH Pentatricopeptide repeat-containing protein At2g02980
OS=Arabidopsis thaliana GN=PCMP-H26 PE=2 SV=2
Length = 603
Score = 458 bits (1178), Expect = e-128, Method: Compositional matrix adjust.
Identities = 230/553 (41%), Positives = 338/553 (61%), Gaps = 32/553 (5%)
Query: 169 ARGIFDVSYKDDVVTWNAMFSGYKRVKQFDETRKLFGEMERKGVLPTSVTIVLVLSACAK 228
AR +F+ + D+V +N+M GY R E LF E+ G+LP + T +L ACA
Sbjct: 82 ARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAV 141
Query: 229 LKDLDVGKRAHRYVKECKIVPNLILENALTDMYAACGEMGFALEIFGNIKNKDVISWTAI 288
K L+ G++ H + + N+ + L +MY C +
Sbjct: 142 AKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECED---------------------- 179
Query: 289 VTGYINRGQVDMARQYFDQMPERDYVLWTAMIDGYLRVNRFREALTLFREMQTSNIRPDE 348
VD AR FD++ E V + AMI GY R NR EAL+LFREMQ ++P+E
Sbjct: 180 ---------VDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNE 230
Query: 349 FTIVSILTACANLGALELGEWVKTYIDKNKVKNDIFVGNALIDMYCKCGDVEKAQRVFRE 408
T++S+L++CA LG+L+LG+W+ Y K+ + V ALIDM+ KCG ++ A +F +
Sbjct: 231 ITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEK 290
Query: 409 MLRKDKFTWTAMIVGLAINGHGDKSLDMFSQMLRASIIPDEVTYVGVLSACTHTGMVDEG 468
M KD W+AMIV A +G +KS+ MF +M ++ PDE+T++G+L+AC+HTG V+EG
Sbjct: 291 MRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEG 350
Query: 469 REYFADMTIQHGIEPNEAHYGCMVDLLGRAGHLNEALEVIKNMPMKPNSIVWGALLGACR 528
R+YF+ M + GI P+ HYG MVDLL RAG+L +A E I +P+ P ++W LL AC
Sbjct: 351 RKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACS 410
Query: 529 VHRDAEMAEMAAKQILELDPDNEAVYVLLCNIYAACNRWDNFRELRQMILDRGIKKTPGC 588
H + ++AE +++I ELD + YV+L N+YA +W+ LR+++ DR K PGC
Sbjct: 411 SHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGC 470
Query: 589 SMIEMNGVVHEFVAGDKSHPQTKEIYLKLDEMTSDLKFVGYMPDISEVF-LDVGEEDKER 647
S IE+N VVHEF +GD T +++ LDEM +LK GY+PD S V ++ +++KE
Sbjct: 471 SSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLSGYVPDTSMVVHANMNDQEKEI 530
Query: 648 AVYQHSEKLAMAFGLISSGPGVTIRIVKNLRMCVDCHRMAKLVSMVYDREVIVRDKTRFH 707
+ HSEKLA+ FGL+++ PG TIR+VKNLR+C DCH AKL+S+++ R+V++RD RFH
Sbjct: 531 TLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCRDCHNAAKLISLIFGRKVVLRDVQRFH 590
Query: 708 HFKHGSCSCKDYW 720
HF+ G CSC D+W
Sbjct: 591 HFEDGKCSCGDFW 603
Score = 218 bits (554), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 122/394 (30%), Positives = 209/394 (53%), Gaps = 36/394 (9%)
Query: 12 TLTQETPLISPIETCESMHQLKQIHSQTIKLGLLTNPTVQNKLVTFCCSE--KGDMKYAC 69
T+ + P++ I C S+ +L QI + IK + + + KL+ FC + M YA
Sbjct: 26 TVNTQNPILL-ISKCNSLRELMQIQAYAIK-SHIEDVSFVAKLINFCTESPTESSMSYAR 83
Query: 70 KVFRKIPRPSVCLWNTMIKGYSRIDSHKNGVLIYLDMLKSDVRPDNYTFPFLLKGFTRDI 129
+F + P + ++N+M +GYSR + +++++L+ + PDNYTFP LLK
Sbjct: 84 HLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAK 143
Query: 130 AVEFGKELHCHVLKFGFDSSVFVQNALISTYCLCGEVDMARGIFDVSYKDDVVTWNAMFS 189
A+E G++LHC +K G D +V+V LI+ Y C +VD AR +FD + VV +NAM +
Sbjct: 144 ALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMIT 203
Query: 190 GYKRVKQFDETRKLFGEMERKGVLPTSVTIVLVLSACAKLKDLDVGKRAHRYVKECKIVP 249
GY R + +E LF EM+ K + P +T++ VLS+CA L LD+GK H+Y K+
Sbjct: 204 GYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCK 263
Query: 250 NLILENALTDMYAACGEMGFALEIFGNIKNKDVISWTAIVTGYINRGQVDMARQYFDQMP 309
+ + AL DM+A CG + A+ IF ++ KD +W+A++ Y N G+ +
Sbjct: 264 YVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAE---------- 313
Query: 310 ERDYVLWTAMIDGYLRVNRFREALTLFREMQTSNIRPDEFTIVSILTACANLGALELG-E 368
+++ +F M++ N++PDE T + +L AC++ G +E G +
Sbjct: 314 ---------------------KSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRK 352
Query: 369 WVKTYIDKNKVKNDIFVGNALIDMYCKCGDVEKA 402
+ + K + I +++D+ + G++E A
Sbjct: 353 YFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDA 386
>sp|Q9C6T2|PPR68_ARATH Pentatricopeptide repeat-containing protein At1g31920
OS=Arabidopsis thaliana GN=PCMP-H11 PE=2 SV=1
Length = 606
Score = 455 bits (1170), Expect = e-127, Method: Compositional matrix adjust.
Identities = 221/552 (40%), Positives = 341/552 (61%), Gaps = 36/552 (6%)
Query: 170 RGIFDVSYKDDVVTWNAMFSGYKRVKQFDETRKLFGEMERKGVLPTSVTIVLVLSACAKL 229
RGI D D +N M GY V F+E + EM ++G P + T +L AC +L
Sbjct: 90 RGIDDPCTFD----FNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRL 145
Query: 230 KDLDVGKRAHRYVKECKIVPNLILENALTDMYAACGEMGFALEIFGNIKNKDVISWTAIV 289
K + GK+ H V + + ++ ++N+L +MY CGEM + +F +++K S
Sbjct: 146 KSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAAS----- 200
Query: 290 TGYINRGQVDMARQYFDQMPERDYVLWTAMIDGYLRVNRFREALTLFREM-QTSNIRPDE 348
W++M+ + + E L LFR M +N++ +E
Sbjct: 201 --------------------------WSSMVSARAGMGMWSECLLLFRGMCSETNLKAEE 234
Query: 349 FTIVSILTACANLGALELGEWVKTYIDKNKVKNDIFVGNALIDMYCKCGDVEKAQRVFRE 408
+VS L ACAN GAL LG + ++ +N + +I V +L+DMY KCG ++KA +F++
Sbjct: 235 SGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQK 294
Query: 409 MLRKDKFTWTAMIVGLAINGHGDKSLDMFSQMLRASIIPDEVTYVGVLSACTHTGMVDEG 468
M +++ T++AMI GLA++G G+ +L MFS+M++ + PD V YV VL+AC+H+G+V EG
Sbjct: 295 MEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEG 354
Query: 469 REYFADMTIQHGIEPNEAHYGCMVDLLGRAGHLNEALEVIKNMPMKPNSIVWGALLGACR 528
R FA+M + +EP HYGC+VDLLGRAG L EALE I+++P++ N ++W L CR
Sbjct: 355 RRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQCR 414
Query: 529 VHRDAEMAEMAAKQILELDPDNEAVYVLLCNIYAACNRWDNFRELRQMILDRGIKKTPGC 588
V ++ E+ ++AA+++L+L N Y+L+ N+Y+ WD+ R I +G+K+TPG
Sbjct: 415 VRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQMWDDVARTRTEIAIKGLKQTPGF 474
Query: 589 SMIEMNGVVHEFVAGDKSHPQTKEIYLKLDEMTSDLKFVGYMPDISEVFLDVGEEDKERA 648
S++E+ G H FV+ D+SHP+ KEIY L +M LKF GY PD++++ L+V EE+K+
Sbjct: 475 SIVELKGKTHRFVSQDRSHPKCKEIYKMLHQMEWQLKFEGYSPDLTQILLNVDEEEKKER 534
Query: 649 VYQHSEKLAMAFGLISSGPGVTIRIVKNLRMCVDCHRMAKLVSMVYDREVIVRDKTRFHH 708
+ HS+K+A+AFGL+ + PG I+I +NLRMC DCH K +SM+Y+RE++VRD+ RFH
Sbjct: 535 LKGHSQKVAIAFGLLYTPPGSIIKIARNLRMCSDCHTYTKKISMIYEREIVVRDRNRFHL 594
Query: 709 FKHGSCSCKDYW 720
FK G+CSCKDYW
Sbjct: 595 FKGGTCSCKDYW 606
Score = 167 bits (424), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 110/413 (26%), Positives = 199/413 (48%), Gaps = 37/413 (8%)
Query: 15 QETPLISPIETCESMHQLKQIHSQTIKLGLLTNPTVQNKLVTFCCSEKG---DMKYACKV 71
+E + ++ C ++ + KQ+H++ IKL L + + V C+ G M YA +
Sbjct: 29 KEQECLYLLKRCHNIDEFKQVHARFIKLSLFYSSSFSASSVLAKCAHSGWENSMNYAASI 88
Query: 72 FRKIPRPSVCLWNTMIKGYSRIDSHKNGVLIYLDMLKSDVRPDNYTFPFLLKGFTRDIAV 131
FR I P +NTMI+GY + S + + Y +M++ PDN+T+P LLK TR ++
Sbjct: 89 FRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSI 148
Query: 132 EFGKELHCHVLKFGFDSSVFVQNALISTYCLCGEVDMARGIFDVSYKDDVVTWNAMFSGY 191
GK++H V K G ++ VFVQN+LI+ Y CGE++++ +F+ +W++M S
Sbjct: 149 REGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSAR 208
Query: 192 KRVKQFDETRKLFGEMERKGVLPTSVT-IVLVLSACAKLKDLDVGKRAHRYVKECKIVPN 250
+ + E LF M + L + +V L ACA L++G H ++ N
Sbjct: 209 AGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELN 268
Query: 251 LILENALTDMYAACGEMGFALEIFGNIKNKDVISWTAIVTGYINRGQVDMARQYFDQMPE 310
+I++ +L DMY CG + AL IF ++ ++ ++++A+++G G+ +
Sbjct: 269 IIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGE----------- 317
Query: 311 RDYVLWTAMIDGYLRVNRFREALTLFREMQTSNIRPDEFTIVSILTACANLGALELGEWV 370
AL +F +M + PD VS+L AC++ G ++ G V
Sbjct: 318 --------------------SALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRV 357
Query: 371 -KTYIDKNKVKNDIFVGNALIDMYCKCGDVEKAQRVFREM-LRKDKFTWTAMI 421
+ + KV+ L+D+ + G +E+A + + + K+ W +
Sbjct: 358 FAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFL 410
Score = 96.3 bits (238), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 136/288 (47%), Gaps = 6/288 (2%)
Query: 19 LISPIETCESMHQLKQIHSQTIKLGLLTNPTVQNKLVTFCCSEKGDMKYACKVFRKIPRP 78
L+ +S+ + KQIH Q KLGL + VQN L+ G+M+ + VF K+
Sbjct: 138 LLKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINM-YGRCGEMELSSAVFEKLESK 196
Query: 79 SVCLWNTMIKGYSRIDSHKNGVLIYLDML-KSDVRPDNYTFPFLLKGFTRDIAVEFGKEL 137
+ W++M+ + + +L++ M +++++ + L A+ G +
Sbjct: 197 TAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSI 256
Query: 138 HCHVLKFGFDSSVFVQNALISTYCLCGEVDMARGIFDVSYKDDVVTWNAMFSGYKRVKQF 197
H +L+ + ++ VQ +L+ Y CG +D A IF K + +T++AM SG +
Sbjct: 257 HGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEG 316
Query: 198 DETRKLFGEMERKGVLPTSVTIVLVLSACAKLKDLDVGKRAH-RYVKECKIVPNLILENA 256
+ ++F +M ++G+ P V V VL+AC+ + G+R +KE K+ P
Sbjct: 317 ESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGC 376
Query: 257 LTDMYAACGEMGFALEIFGN--IKNKDVISWTAIVTGYINRGQVDMAR 302
L D+ G + ALE + I+ DVI W ++ R +++ +
Sbjct: 377 LVDLLGRAGLLEEALETIQSIPIEKNDVI-WRTFLSQCRVRQNIELGQ 423
Score = 42.0 bits (97), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 59/125 (47%), Gaps = 2/125 (1%)
Query: 402 AQRVFREMLRKDKFTWTAMIVGLAINGHGDKSLDMFSQMLRASIIPDEVTYVGVLSACTH 461
A +FR + F + MI G +++L +++M++ PD TY +L ACT
Sbjct: 85 AASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTR 144
Query: 462 TGMVDEGREYFADMTIQHGIEPNEAHYGCMVDLLGRAGHLNEALEVIKNMPMKPNSIVWG 521
+ EG++ + + G+E + ++++ GR G + + V + + K + W
Sbjct: 145 LKSIREGKQIHGQV-FKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESK-TAASWS 202
Query: 522 ALLGA 526
+++ A
Sbjct: 203 SMVSA 207
>sp|Q9FRI5|PPR57_ARATH Pentatricopeptide repeat-containing protein At1g25360
OS=Arabidopsis thaliana GN=PCMP-H74 PE=2 SV=1
Length = 790
Score = 454 bits (1169), Expect = e-127, Method: Compositional matrix adjust.
Identities = 248/709 (34%), Positives = 381/709 (53%), Gaps = 53/709 (7%)
Query: 57 FCCSEKGDMKYACKVFRKIP---RPSVCLWNTMIKGYSRIDSHKNGVLIYLDMLKSDVRP 113
+C S GD+ A VF K P R +V ++N MI G+S + + + ++ M +P
Sbjct: 90 YCAS--GDITLARGVFEKAPVCMRDTV-MYNAMITGFSHNNDGYSAINLFCKMKHEGFKP 146
Query: 114 DNYTFPFLLKGFT-----RDIAVEFGKELHCHVLKFGFDSSVFVQNALISTYCLCGE--- 165
DN+TF +L G V+F H LK G V NAL+S Y C
Sbjct: 147 DNFTFASVLAGLALVADDEKQCVQF----HAAALKSGAGYITSVSNALVSVYSKCASSPS 202
Query: 166 -VDMARGIFDVSYKDDVVTWNAMFSGYKRVKQFD-------------------------- 198
+ AR +FD + D +W M +GY + FD
Sbjct: 203 LLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYV 262
Query: 199 ------ETRKLFGEMERKGVLPTSVTIVLVLSACAKLKDLDVGKRAHRYVKECKIVPNLI 252
E ++ M G+ T V+ ACA L +GK+ H YV + +
Sbjct: 263 NRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDF-SFH 321
Query: 253 LENALTDMYAACGEMGFALEIFGNIKNKDVISWTAIVTGYINRGQVDMARQYFDQMPERD 312
+N+L +Y CG+ A IF + KD++SW A+++GY++ G + A+ F +M E++
Sbjct: 322 FDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKN 381
Query: 313 YVLWTAMIDGYLRVNRFREALTLFREMQTSNIRPDEFTIVSILTACANLGALELGEWVKT 372
+ W MI G E L LF M+ P ++ + +CA LGA G+
Sbjct: 382 ILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHA 441
Query: 373 YIDKNKVKNDIFVGNALIDMYCKCGDVEKAQRVFREMLRKDKFTWTAMIVGLAINGHGDK 432
+ K + + GNALI MY KCG VE+A++VFR M D +W A+I L +GHG +
Sbjct: 442 QLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAE 501
Query: 433 SLDMFSQMLRASIIPDEVTYVGVLSACTHTGMVDEGREYFADMTIQHGIEPNEAHYGCMV 492
++D++ +ML+ I PD +T + VL+AC+H G+VD+GR+YF M + I P HY ++
Sbjct: 502 AVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLI 561
Query: 493 DLLGRAGHLNEALEVIKNMPMKPNSIVWGALLGACRVHRDAEMAEMAAKQILELDPDNEA 552
DLL R+G ++A VI+++P KP + +W ALL CRVH + E+ +AA ++ L P+++
Sbjct: 562 DLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDG 621
Query: 553 VYVLLCNIYAACNRWDNFRELRQMILDRGIKKTPGCSMIEMNGVVHEFVAGDKSHPQTKE 612
Y+LL N++AA +W+ +R+++ DRG+KK CS IEM VH F+ D SHP+ +
Sbjct: 622 TYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEA 681
Query: 613 IYLKLDEMTSDLKFVGYMPDISEVFLDV-GEEDKERAVYQHSEKLAMAFGLISSGPGVTI 671
+Y+ L ++ +++ +GY+PD S V DV + KE + HSEK+A+AFGL+ PG TI
Sbjct: 682 VYIYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTTI 741
Query: 672 RIVKNLRMCVDCHRMAKLVSMVYDREVIVRDKTRFHHFKHGSCSCKDYW 720
RI KNLR C DCH + +S V R++I+RD+ RFHHF++G CSC ++W
Sbjct: 742 RIFKNLRTCGDCHNFFRFLSWVVQRDIILRDRKRFHHFRNGECSCGNFW 790
Score = 182 bits (462), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 135/511 (26%), Positives = 228/511 (44%), Gaps = 79/511 (15%)
Query: 127 RDIAVEFGKELHCHVLKFGFDSSVFVQNALI----------------------------- 157
R +++ + +H +++ FGF + N LI
Sbjct: 26 RRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTT 85
Query: 158 --STYCLCGEVDMARGIFDVSY--KDDVVTWNAMFSGYKRVKQFDETRKLFGEMERKGVL 213
S YC G++ +ARG+F+ + D V +NAM +G+ LF +M+ +G
Sbjct: 86 MVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFK 145
Query: 214 PTSVTIVLVLSACAKLKDLDVGKRAHRYVKECKIVPNLI--LENALTDMYAACGE----M 267
P + T VL+ A + D D + + K I + NAL +Y+ C +
Sbjct: 146 PDNFTFASVLAGLALVAD-DEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLL 204
Query: 268 GFALEIFGNIKNKDVISWTAIVTGYINRGQVDMARQYFDQMPER-DYVLWTAMIDGYLRV 326
A ++F I KD SWT ++TGY+ G D+ + + M + V + AMI GY+
Sbjct: 205 HSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNR 264
Query: 327 NRFREALTLFREMQTSNIRPDEFTIVSILTACANLGALELGEWVKTYI----------DK 376
++EAL + R M +S I DEFT S++ ACA G L+LG+ V Y+ D
Sbjct: 265 GFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFDN 324
Query: 377 NKVK--------------------NDIFVGNALIDMYCKCGDVEKAQRVFREMLRKDKFT 416
+ V D+ NAL+ Y G + +A+ +F+EM K+ +
Sbjct: 325 SLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILS 384
Query: 417 WTAMIVGLAINGHGDKSLDMFSQMLRASIIPDEVTYVGVLSACTHTGMVDEGREYFADMT 476
W MI GLA NG G++ L +FS M R P + + G + +C G G++Y A +
Sbjct: 385 WMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQL- 443
Query: 477 IQHGIEPNEAHYGCMVDLLGRAGHLNEALEVIKNMPMKPNSIVWGALLGACRVHRDAEMA 536
++ G + + + ++ + + G + EA +V + MP +S+ W AL+ A H A
Sbjct: 444 LKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCL-DSVSWNALIAALGQHGHGAEA 502
Query: 537 EMAAKQILE--LDPDNEAVYVLLCNIYAACN 565
+++L+ + PD + L + AC+
Sbjct: 503 VDVYEEMLKKGIRPDR----ITLLTVLTACS 529
Score = 127 bits (318), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 97/347 (27%), Positives = 158/347 (45%), Gaps = 48/347 (13%)
Query: 223 LSACAKLK--DLDVGKRAHRYVKECKIVPNLILENALTDMYAACGEMGFALEIFGNIKNK 280
L C L+ L + + H + P + N L D+Y E+ +A ++F I
Sbjct: 19 LRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEP 78
Query: 281 DVISWTAIVTGYINRGQVDMARQYFDQMP--ERDYVLWTAMIDGYLRVNRFREALTLFRE 338
D I+ T +V+GY G + +AR F++ P RD V++ AMI G+ N A+ LF +
Sbjct: 79 DKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCK 138
Query: 339 MQTSNIRPDEFTIVSILTACANLGALELGEWVKTYID--KNKVKNDIFVGNALIDMYCKC 396
M+ +PD FT S+L A L A + + V+ + K+ V NAL+ +Y KC
Sbjct: 139 MKHEGFKPDNFTFASVLAGLA-LVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKC 197
Query: 397 GD----VEKAQRVFREMLRKDKFTWTAMIVGLAINGHGD--------------------- 431
+ A++VF E+L KD+ +WT M+ G NG+ D
Sbjct: 198 ASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAM 257
Query: 432 -----------KSLDMFSQMLRASIIPDEVTYVGVLSACTHTGMVDEGREYFADMTIQHG 480
++L+M +M+ + I DE TY V+ AC G++ G++ A + +
Sbjct: 258 ISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRR-- 315
Query: 481 IEPNEAHY-GCMVDLLGRAGHLNEALEVIKNMPMKPNSIVWGALLGA 526
E H+ +V L + G +EA + + MP K + + W ALL
Sbjct: 316 -EDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAK-DLVSWNALLSG 360
Score = 53.1 bits (126), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 73/168 (43%), Gaps = 19/168 (11%)
Query: 33 KQIHSQTIKLGLLTNPTVQNKLVTFCCSEKGDMKYACKVFRKIPRPSVCLWNTMIKGYSR 92
+Q H+Q +K+G ++ + N L+T ++ G ++ A +VFR +P WN +I +
Sbjct: 437 QQYHAQLLKIGFDSSLSAGNALITM-YAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQ 495
Query: 93 IDSHKNGVLIYLDMLKSDVRPDNYTFPFLLKGFTRDIAVEFGKELHCHVLKFGFDSSVFV 152
V +Y +MLK +RPD T +L + V+ G++ FDS V
Sbjct: 496 HGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKY--------FDSMETV 547
Query: 153 QNA---------LISTYCLCGEVDMARGIFD-VSYKDDVVTWNAMFSG 190
LI C G+ A + + + +K W A+ SG
Sbjct: 548 YRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSG 595
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 452 bits (1163), Expect = e-126, Method: Compositional matrix adjust.
Identities = 243/702 (34%), Positives = 389/702 (55%), Gaps = 38/702 (5%)
Query: 21 SPIETCESMHQLKQIHSQTIKLGLLTNPTVQNKLVTFCCSEKGDMKYACKVFRKIPRPSV 80
S ++ C ++ +IH +K G + + V L+ K + A +F ++P +
Sbjct: 158 SVLKACRTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKA-VGNARILFDEMPVRDM 216
Query: 81 CLWNTMIKGYSRIDSHKNGVLIYLDMLKSDVRP-DNYTFPFLLKGFTRDIAVEFGKELHC 139
WN MI GY + + K + L + +R D+ T LL T G +H
Sbjct: 217 GSWNAMISGYCQSGNAKEAL-----TLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHS 271
Query: 140 HVLKFGFDSSVFVQNALISTYCLCGEVDMARGIFDVSYKDDVVTWNAMFSGYKRVKQFDE 199
+ +K G +S +FV N LI Y G + + +FD Y D+++WN++ Y+ +Q
Sbjct: 272 YSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLR 331
Query: 200 TRKLFGEMERKGVLPTSVTIVLVLSACAKLKDLDVGKRAHRYVKECKIVPNLILENALTD 259
LF EM + P +T++ + S ++L D ++ C+ V L
Sbjct: 332 AISLFQEMRLSRIQPDCLTLISLASILSQLGD----------IRACRSVQGFTLRK---- 377
Query: 260 MYAACGEMGFALEIFGNIKNKDVISWTAIVTGYINRGQVDMARQYFDQMPERDYVLWTAM 319
G+ LE D+ A+V Y G VD AR F+ +P D + W +
Sbjct: 378 --------GWFLE--------DITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTI 421
Query: 320 IDGYLRVNRFREALTLFREMQTSN-IRPDEFTIVSILTACANLGALELGEWVKTYIDKNK 378
I GY + EA+ ++ M+ I ++ T VS+L AC+ GAL G + + KN
Sbjct: 422 ISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNG 481
Query: 379 VKNDIFVGNALIDMYCKCGDVEKAQRVFREMLRKDKFTWTAMIVGLAINGHGDKSLDMFS 438
+ D+FV +L DMY KCG +E A +F ++ R + W +I +GHG+K++ +F
Sbjct: 482 LYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFK 541
Query: 439 QMLRASIIPDEVTYVGVLSACTHTGMVDEGREYFADMTIQHGIEPNEAHYGCMVDLLGRA 498
+ML + PD +T+V +LSAC+H+G+VDEG+ F M +GI P+ HYGCMVD+ GRA
Sbjct: 542 EMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRA 601
Query: 499 GHLNEALEVIKNMPMKPNSIVWGALLGACRVHRDAEMAEMAAKQILELDPDNEAVYVLLC 558
G L AL+ IK+M ++P++ +WGALL ACRVH + ++ ++A++ + E++P++ +VLL
Sbjct: 602 GQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLS 661
Query: 559 NIYAACNRWDNFRELRQMILDRGIKKTPGCSMIEMNGVVHEFVAGDKSHPQTKEIYLKLD 618
N+YA+ +W+ E+R + +G++KTPG S +E++ V F G+++HP +E+Y +L
Sbjct: 662 NMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELT 721
Query: 619 EMTSDLKFVGYMPDISEVFLDVGEEDKERAVYQHSEKLAMAFGLISSGPGVTIRIVKNLR 678
+ + LK +GY+PD V DV +++KE + HSE+LA+AF LI++ TIRI KNLR
Sbjct: 722 ALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKNLR 781
Query: 679 MCVDCHRMAKLVSMVYDREVIVRDKTRFHHFKHGSCSCKDYW 720
+C DCH + K +S + +RE+IVRD RFHHFK+G CSC DYW
Sbjct: 782 VCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823
Score = 216 bits (550), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 169/582 (29%), Positives = 270/582 (46%), Gaps = 58/582 (9%)
Query: 26 CESMHQLKQIHSQTIKLGLLTNPTVQNKLVTFCCSEKGDMKYACKVFRKIPRPSVCLWNT 85
C ++ K +H++ + + N + KLV C G++ A F I V WN
Sbjct: 64 CTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCY-LGNVALARHTFDHIQNRDVYAWNL 122
Query: 86 MIKGYSRIDSHKNGVLIY-LDMLKSDVRPDNYTFPFLLKGFTRDIAVEFGKELHCHVLKF 144
MI GY R + + + L ML S + PD TFP +LK I G ++HC LKF
Sbjct: 123 MISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKIHCLALKF 179
Query: 145 GFDSSVFVQNALISTYCLCGEVDMARGIFDVSYKDDVVTWNAMFSGYKRVKQFDETRKLF 204
GF V+V +LI Y V AR +FD D+ +WNAM SGY + E L
Sbjct: 180 GFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLS 239
Query: 205 GEMERKGVLPTSVTIVLVLSACAKLKDLDVGKRAHRYVKECKIVPNLILENALTDMYAAC 264
+ SVT+V +LSAC + D + G H Y + + L + N L D+YA
Sbjct: 240 NGLRAM----DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEF 295
Query: 265 GEMGFALEIFGNIKNKDVISWTAIVTGYINRGQVDMARQYFDQMPERDYVLWTAMIDGYL 324
G + ++F + +D+ISW +I+ Y ++ P R
Sbjct: 296 GRLRDCQKVFDRMYVRDLISWNSIIKAY-----------ELNEQPLR------------- 331
Query: 325 RVNRFREALTLFREMQTSNIRPDEFTIVSILTACANLGALELGEWVKTY-IDKNKVKNDI 383
A++LF+EM+ S I+PD T++S+ + + LG + V+ + + K DI
Sbjct: 332 -------AISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDI 384
Query: 384 FVGNALIDMYCKCGDVEKAQRVFREMLRKDKFTWTAMIVGLAINGHGDKSLDMFSQM-LR 442
+GNA++ MY K G V+ A+ VF + D +W +I G A NG ++++M++ M
Sbjct: 385 TIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEE 444
Query: 443 ASIIPDEVTYVGVLSACTHTGMVDEGREYFADMTIQHGIEPNEAHYGCMVDLLGRAGHLN 502
I ++ T+V VL AC+ G + +G + + +++G+ + + D+ G+ G L
Sbjct: 445 GEIAANQGTWVSVLPACSQAGALRQGMKLHGRL-LKNGLYLDVFVVTSLADMYGKCGRLE 503
Query: 503 EALEVIKNMPMKPNSIVWGALLGACRVHRDAEMAEMAAKQILE--LDPDNEAVYVLLCNI 560
+AL + +P + NS+ W L+ H E A M K++L+ + PD+ LL
Sbjct: 504 DALSLFYQIP-RVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLL--- 559
Query: 561 YAACNRWDNFRE----LRQMILDRGIK---KTPGCSMIEMNG 595
+AC+ E M D GI K GC M++M G
Sbjct: 560 -SACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGC-MVDMYG 599
Score = 92.8 bits (229), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 143/312 (45%), Gaps = 19/312 (6%)
Query: 7 ISPPSTLTQETPLISPIETCESMHQLKQIHSQTIKLG-LLTNPTVQNKLVTFCCSEKGDM 65
IS S L+Q + I C S+ T++ G L + T+ N +V ++ G +
Sbjct: 352 ISLASILSQ----LGDIRACRSVQGF------TLRKGWFLEDITIGNAVVVMY-AKLGLV 400
Query: 66 KYACKVFRKIPRPSVCLWNTMIKGYSRIDSHKNGVLIYLDM-LKSDVRPDNYTFPFLLKG 124
A VF +P V WNT+I GY++ + +Y M + ++ + T+ +L
Sbjct: 401 DSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPA 460
Query: 125 FTRDIAVEFGKELHCHVLKFGFDSSVFVQNALISTYCLCGEVDMARGIFDVSYKDDVVTW 184
++ A+ G +LH +LK G VFV +L Y CG ++ A +F + + V W
Sbjct: 461 CSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPW 520
Query: 185 NAMFSGYKRVKQFDETRKLFGEMERKGVLPTSVTIVLVLSACAKLKDLDVGKRAHRYVK- 243
N + + + ++ LF EM +GV P +T V +LSAC+ +D G+ ++
Sbjct: 521 NTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQT 580
Query: 244 ECKIVPNLILENALTDMYAACGEMGFALEIFGNIK-NKDVISWTAIVTGYINRGQVDMAR 302
+ I P+L + DMY G++ AL+ ++ D W A+++ G VD+ +
Sbjct: 581 DYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGK 640
Query: 303 ----QYFDQMPE 310
F+ PE
Sbjct: 641 IASEHLFEVEPE 652
>sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protein At3g24000,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2
SV=1
Length = 633
Score = 449 bits (1156), Expect = e-125, Method: Compositional matrix adjust.
Identities = 227/616 (36%), Positives = 354/616 (57%), Gaps = 32/616 (5%)
Query: 105 DMLKSDVRPDNYTFPFLLKGFTRDIAVEFGKELHCHVLKFGFDSSVFVQNALISTYCLCG 164
D+ S + D + LLK T + G+ +H H+L+ F + + N L++ Y CG
Sbjct: 50 DLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCG 109
Query: 165 EVDMARGIFDVSYKDDVVTWNAMFSGYKRVKQFDETRKLFGEMERKGVLPTSVTIVLVLS 224
++ AR +F+ + D VTW + SGY + + + F +M R G P T+ V+
Sbjct: 110 SLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIK 169
Query: 225 ACAKLKDLDVGKRAHRYVKECKIVPNLILENALTDMYAACGEMGFALEIFGNIKNKDVIS 284
A A + G + H + +C N+ + +AL D+Y G M
Sbjct: 170 AAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLM----------------- 212
Query: 285 WTAIVTGYINRGQVDMARQYFDQMPERDYVLWTAMIDGYLRVNRFREALTLFREMQTSNI 344
D A+ FD + R+ V W A+I G+ R + +AL LF+ M
Sbjct: 213 --------------DDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGF 258
Query: 345 RPDEFTIVSILTACANLGALELGEWVKTYIDKNKVKNDIFVGNALIDMYCKCGDVEKAQR 404
RP F+ S+ AC++ G LE G+WV Y+ K+ K F GN L+DMY K G + A++
Sbjct: 259 RPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARK 318
Query: 405 VFREMLRKDKFTWTAMIVGLAINGHGDKSLDMFSQMLRASIIPDEVTYVGVLSACTHTGM 464
+F + ++D +W +++ A +G G +++ F +M R I P+E++++ VL+AC+H+G+
Sbjct: 319 IFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGL 378
Query: 465 VDEGREYFADMTIQHGIEPNEAHYGCMVDLLGRAGHLNEALEVIKNMPMKPNSIVWGALL 524
+DEG Y+ ++ + GI P HY +VDLLGRAG LN AL I+ MP++P + +W ALL
Sbjct: 379 LDEGWHYY-ELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALL 437
Query: 525 GACRVHRDAEMAEMAAKQILELDPDNEAVYVLLCNIYAACNRWDNFRELRQMILDRGIKK 584
ACR+H++ E+ AA+ + ELDPD+ +V+L NIYA+ RW++ +R+ + + G+KK
Sbjct: 438 NACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKK 497
Query: 585 TPGCSMIEMNGVVHEFVAGDKSHPQTKEIYLKLDEMTSDLKFVGYMPDISEVFLDVGEED 644
P CS +E+ +H FVA D+ HPQ +EI K +E+ + +K +GY+PD S V + V +++
Sbjct: 498 EPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQE 557
Query: 645 KERAVYQHSEKLAMAFGLISSGPGVTIRIVKNLRMCVDCHRMAKLVSMVYDREVIVRDKT 704
+E + HSEK+A+AF L+++ PG TI I KN+R+C DCH KL S V RE+IVRD
Sbjct: 558 REVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRDTN 617
Query: 705 RFHHFKHGSCSCKDYW 720
RFHHFK G+CSCKDYW
Sbjct: 618 RFHHFKDGNCSCKDYW 633
Score = 162 bits (409), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 107/388 (27%), Positives = 182/388 (46%), Gaps = 34/388 (8%)
Query: 63 GDMKYACKVFRKIPRPSVCLWNTMIKGYSRIDSHKNGVLIYLDMLKSDVRPDNYTFPFLL 122
G ++ A KVF K+P+ W T+I GYS+ D + +L + ML+ P+ +T ++
Sbjct: 109 GSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVI 168
Query: 123 KGFTRDIAVEFGKELHCHVLKFGFDSSVFVQNALISTYCLCGEVDMARGIFDVSYKDDVV 182
K + G +LH +K GFDS+V V +AL+ Y G +D A+ +FD + V
Sbjct: 169 KAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDV 228
Query: 183 TWNAMFSGYKRVKQFDETRKLFGEMERKGVLPTSVTIVLVLSACAKLKDLDVGKRAHRYV 242
+WNA+ +G+ R ++ +LF M R G P+ + + AC+ L+ GK H Y+
Sbjct: 229 SWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYM 288
Query: 243 KECKIVPNLILENALTDMYAACGEMGFALEIFGNIKNKDVISWTAIVTGYINRGQVDMAR 302
+ N L DMYA G + A +IF + +DV+SW +++T Y G
Sbjct: 289 IKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHG------ 342
Query: 303 QYFDQMPERDYVLWTAMIDGYLRVNRFREALTLFREMQTSNIRPDEFTIVSILTACANLG 362
F +EA+ F EM+ IRP+E + +S+LTAC++ G
Sbjct: 343 --FG-----------------------KEAVWWFEEMRRVGIRPNEISFLSVLTACSHSG 377
Query: 363 ALELGEWVKTYIDKNKVKNDIFVGNALIDMYCKCGDVEKAQRVFREM-LRKDKFTWTAMI 421
L+ G + K+ + + + ++D+ + GD+ +A R EM + W A++
Sbjct: 378 LLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALL 437
Query: 422 VGLAINGHGDKSLDMFSQMLRASIIPDE 449
A H + L ++ + PD+
Sbjct: 438 N--ACRMHKNTELGAYAAEHVFELDPDD 463
Score = 39.7 bits (91), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 54/272 (19%), Positives = 102/272 (37%), Gaps = 55/272 (20%)
Query: 29 MHQLKQIHSQTIKLGLLTNPTVQNKLVTFCCSEKGDMKYACKVFRKIPRPSVCLWNTMIK 88
+ Q K +H+ IK G N L+ ++ G + A K+F ++ + V WN+++
Sbjct: 278 LEQGKWVHAYMIKSGEKLVAFAGNTLLDMY-AKSGSIHDARKIFDRLAKRDVVSWNSLLT 336
Query: 89 GYSRIDSHKNGVLIYLDMLKSDVRPDNYTFPFLLKGFTRDIAVEFGKELHCHVLKFGFDS 148
Y++ K V + +M + +RP+ +F +L +
Sbjct: 337 AYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHS-------------------- 376
Query: 149 SVFVQNALISTYCLCGEVDMARGIFDVSYKDDVV--TWN--AMFSGYKRVKQFDETRKLF 204
G +D +++ KD +V W+ + R + +
Sbjct: 377 ---------------GLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFI 421
Query: 205 GEMERKGVLPTSVTIVLVLSACAKLKDLDVGKRAHRYVKEC---KIVPNLILENALTDMY 261
EM + PT+ +L+AC K+ ++G A +V E P++IL N +Y
Sbjct: 422 EEMP---IEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYN----IY 474
Query: 262 AACGEMGFALEIF-----GNIKNKDVISWTAI 288
A+ G A + +K + SW I
Sbjct: 475 ASGGRWNDAARVRKKMKESGVKKEPACSWVEI 506
>sp|Q0WQW5|PPR85_ARATH Pentatricopeptide repeat-containing protein At1g59720,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H51 PE=2
SV=2
Length = 638
Score = 447 bits (1151), Expect = e-124, Method: Compositional matrix adjust.
Identities = 235/606 (38%), Positives = 356/606 (58%), Gaps = 52/606 (8%)
Query: 135 KELHCHVLKFGFD---SSVFVQNALISTYCLCGEVDMARGIFDVSYKDDVVTWNAMFSGY 191
K+LH L+ + +++F+ ++ +V+ A +FD WN +
Sbjct: 65 KQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRAC 124
Query: 192 KR-VKQFDETRKLFGEM-ERKGVLPTSVTIVLVLSACAKLKDLDVGKRAHRYVKECKIVP 249
V + +E L+ +M ER P T VL ACA + GK+ H + +
Sbjct: 125 AHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGG 184
Query: 250 NLILENALTDMYAACGEMGFALEIFGNIKNKDVISWTAIVTGYINRGQVDMARQYFDQMP 309
++ + N L +Y +CG + D+AR+ FD+MP
Sbjct: 185 DVYVNNGLIHLYGSCGCL-------------------------------DLARKVFDEMP 213
Query: 310 ERDYVLWTAMIDGYLRVNRFREALTLFREMQTSNIRPDEFTIVSILTACANLGALELGEW 369
ER V W +MID +R + AL LFREMQ S PD +T+ S+L+ACA LG+L LG W
Sbjct: 214 ERSLVSWNSMIDALVRFGEYDSALQLFREMQRS-FEPDGYTMQSVLSACAGLGSLSLGTW 272
Query: 370 VKTYIDKN---KVKNDIFVGNALIDMYCKCGDVEKAQRVFREMLRKDKFTWTAMIVGLAI 426
++ + V D+ V N+LI+MYCKCG + A++VF+ M ++D +W AMI+G A
Sbjct: 273 AHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFAT 332
Query: 427 NGHGDKSLDMFSQML--RASIIPDEVTYVGVLSACTHTGMVDEGREYFADMTIQHGIEPN 484
+G +++++ F +M+ R ++ P+ VT+VG+L AC H G V++GR+YF M + IEP
Sbjct: 333 HGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPA 392
Query: 485 EAHYGCMVDLLGRAGHLNEALEVIKNMPMKPNSIVWGALLGAC-RVHRDAEMAEMAAKQI 543
HYGC+VDL+ RAG++ EA++++ +MPMKP++++W +LL AC + E++E A+ I
Sbjct: 393 LEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNI 452
Query: 544 LELDPDNEA-------VYVLLCNIYAACNRWDNFRELRQMILDRGIKKTPGCSMIEMNGV 596
+ DNE+ YVLL +YA+ +RW++ +R+++ + GI+K PGCS IE+NG+
Sbjct: 453 IGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGI 512
Query: 597 VHEFVAGDKSHPQTKEIYLKLDEMTSDLKFVGYMPDISEVFLDVGEED--KERAVYQHSE 654
HEF AGD SHPQTK+IY +L + L+ +GY+PD S+ L D KE ++ HSE
Sbjct: 513 SHEFFAGDTSHPQTKQIYQQLKVIDDRLRSIGYLPDRSQAPLVDATNDGSKEYSLRLHSE 572
Query: 655 KLAMAFGLISSGPGVTIRIVKNLRMCVDCHRMAKLVSMVYDREVIVRDKTRFHHFKHGSC 714
+LA+AFGLI+ P IRI KNLR+C DCH + KL+S V++ E+IVRD+ RFHHFK GSC
Sbjct: 573 RLAIAFGLINLPPQTPIRIFKNLRVCNDCHEVTKLISKVFNTEIIVRDRVRFHHFKDGSC 632
Query: 715 SCKDYW 720
SC DYW
Sbjct: 633 SCLDYW 638
Score = 195 bits (496), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 122/427 (28%), Positives = 212/427 (49%), Gaps = 41/427 (9%)
Query: 5 SSISPPSTLTQETPLISPIETCESMHQLKQIHSQTIKLGLLTNPT---VQNKLVTFCCSE 61
SS S + + S ETC M QLKQ+H+ T++ P + K++ S
Sbjct: 37 SSPSASTAGNHHQRIFSLAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLS-SS 95
Query: 62 KGDMKYACKVFRKIPRPSVCLWNTMIKGYSRIDSHKN-GVLIYLDML-KSDVRPDNYTFP 119
D+ YA +VF I S +WNT+I+ + S K ++Y ML + + PD +TFP
Sbjct: 96 FSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFP 155
Query: 120 FLLKGFTRDIAVEFGKELHCHVLKFGFDSSVFVQNALISTYCLCGEVDMARGIFDVSYKD 179
F+LK GK++HC ++K GF V+V N LI Y CG +D+AR +FD +
Sbjct: 156 FVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPER 215
Query: 180 DVVTWNAMFSGYKRVKQFDETRKLFGEMERKGVLPTSVTIVLVLSACAKLKDLDVGKRAH 239
+V+WN+M R ++D +LF EM+R P T+ VLSACA L L +G AH
Sbjct: 216 SLVSWNSMIDALVRFGEYDSALQLFREMQRS-FEPDGYTMQSVLSACAGLGSLSLGTWAH 274
Query: 240 RY-VKEC--KIVPNLILENALTDMYAACGEMGFALEIFGNIKNKDVISWTAIVTGYINRG 296
+ +++C + +++++N+L +MY CG + A ++F ++ +D+ SW A++ G+ G
Sbjct: 275 AFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHG 334
Query: 297 QVDMARQYFDQMPERDYVLWTAMIDGYLRVNRFREALTLFREMQTSNIRPDEFTIVSILT 356
+ + A +FD+M ++ RE N+RP+ T V +L
Sbjct: 335 RAEEAMNFFDRMVDK------------------RE-----------NVRPNSVTFVGLLI 365
Query: 357 ACANLGALELG-EWVKTYIDKNKVKNDIFVGNALIDMYCKCGDVEKAQRVFREM-LRKDK 414
AC + G + G ++ + ++ + ++D+ + G + +A + M ++ D
Sbjct: 366 ACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDA 425
Query: 415 FTWTAMI 421
W +++
Sbjct: 426 VIWRSLL 432
>sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containing protein At3g49142
OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1
Length = 686
Score = 446 bits (1146), Expect = e-124, Method: Compositional matrix adjust.
Identities = 228/607 (37%), Positives = 333/607 (54%), Gaps = 42/607 (6%)
Query: 156 LISTYCLCGEVDMARGIFDVSYKDDVVTWNAMFSGYKRVKQFDETRKLFGEMERKGVLPT 215
L+ Y +V AR +FD + +V+ N M Y + E K+FG M V P
Sbjct: 80 LMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPD 139
Query: 216 SVTIVLVLSACAKLKDLDVGKRAHRYVKECKIVPNLILENALTDMYAACGEMGFALEIFG 275
T VL AC+ + +G++ H + + L + N L MY CG + A +
Sbjct: 140 HYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLD 199
Query: 276 NIKNKDVISWTAIVTGYINRGQVDMA---------------------------------- 301
+ +DV+SW ++V GY + D A
Sbjct: 200 EMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENV 259
Query: 302 ---RQYFDQMPERDYVLWTAMIDGYLRVNRFREALTLFREMQTSNIRPDEFTIVSILTAC 358
+ F +M ++ V W MI Y++ EA+ L+ M+ PD +I S+L AC
Sbjct: 260 MYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPAC 319
Query: 359 ANLGALELGEWVKTYIDKNKVKNDIFVGNALIDMYCKCGDVEKAQRVFREMLRKDKFTWT 418
+ AL LG+ + YI++ K+ ++ + NALIDMY KCG +EKA+ VF M +D +WT
Sbjct: 320 GDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWT 379
Query: 419 AMIVGLAINGHGDKSLDMFSQMLRASIIPDEVTYVGVLSACTHTGMVDEGREYFADMTIQ 478
AMI +G G ++ +FS++ + ++PD + +V L+AC+H G+++EGR F MT
Sbjct: 380 AMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDH 439
Query: 479 HGIEPNEAHYGCMVDLLGRAGHLNEALEVIKNMPMKPNSIVWGALLGACRVHRDAEMAEM 538
+ I P H CMVDLLGRAG + EA I++M M+PN VWGALLGACRVH D ++ +
Sbjct: 440 YKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLL 499
Query: 539 AAKQILELDPDNEAVYVLLCNIYAACNRWDNFRELRQMILDRGIKKTPGCSMIEMNGVVH 598
AA ++ +L P+ YVLL NIYA RW+ +R ++ +G+KK PG S +E+N ++H
Sbjct: 500 AADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIH 559
Query: 599 EFVAGDKSHPQTKEIYLKLDEMTSDLKFVGYMPDISEVFLDVGEEDKERAVYQHSEKLAM 658
F+ GD+SHPQ+ EIY +LD + +K +GY+PD DV EEDKE + HSEKLA+
Sbjct: 560 TFLVGDRSHPQSDEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAI 619
Query: 659 AFGLISS-----GPGVTIRIVKNLRMCVDCHRMAKLVSMVYDREVIVRDKTRFHHFKHGS 713
F L+++ TIRI KNLR+C DCH AKL+S + RE+I+RD RFH F+ G
Sbjct: 620 VFALMNTKEEEEDSNNTIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGV 679
Query: 714 CSCKDYW 720
CSC DYW
Sbjct: 680 CSCGDYW 686
Score = 179 bits (453), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 140/498 (28%), Positives = 239/498 (47%), Gaps = 48/498 (9%)
Query: 5 SSISPPSTLTQETP------LISPIETCESMHQLKQIHSQTIKLGLLTNPTVQNKLVTFC 58
SS P L Q++P L ++T + L+ +HS+ I L N ++ KL+
Sbjct: 25 SSSLPKLELDQKSPQETVFLLGQVLDTYPDIRTLRTVHSRIILEDLRCNSSLGVKLMRAY 84
Query: 59 CSEKGDMKYACKVFRKIPRPSVCLWNTMIKGYSRIDSHKNGVLIYLDMLKSDVRPDNYTF 118
S K D+ A KVF +IP +V + N MI+ Y + GV ++ M +VRPD+YTF
Sbjct: 85 ASLK-DVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTF 143
Query: 119 PFLLKGFTRDIAVEFGKELHCHVLKFGFDSSVFVQNALISTYCLCGEVDMARGIFDVSYK 178
P +LK + + G+++H K G S++FV N L+S Y CG + AR + D +
Sbjct: 144 PCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSR 203
Query: 179 DDVVTWNAMFSGYKRVKQFDETRKLFGEMERKGVLPTSVTIVLVLSACAK--------LK 230
DVV+WN++ GY + ++FD+ ++ EME + + T+ +L A + +K
Sbjct: 204 RDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVK 263
Query: 231 DL--DVGKRA--------HRYVKECKIVPNLILEN------------ALTDMYAACGE-- 266
D+ +GK++ Y+K V + L + ++T + ACG+
Sbjct: 264 DMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTS 323
Query: 267 -MGFALEIFGNIKNKDVIS----WTAIVTGYINRGQVDMARQYFDQMPERDYVLWTAMID 321
+ +I G I+ K +I A++ Y G ++ AR F+ M RD V WTAMI
Sbjct: 324 ALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMIS 383
Query: 322 GYLRVNRFREALTLFREMQTSNIRPDEFTIVSILTACANLGALELG-EWVKTYIDKNKVK 380
Y R +A+ LF ++Q S + PD V+ L AC++ G LE G K D K+
Sbjct: 384 AYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKIT 443
Query: 381 NDIFVGNALIDMYCKCGDVEKAQRVFREM-LRKDKFTWTAMIVGLAINGHGDKSLDMFSQ 439
+ ++D+ + G V++A R ++M + ++ W A++ + H D + + +
Sbjct: 444 PRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRV--HSDTDIGLLAA 501
Query: 440 MLRASIIPDEVTYVGVLS 457
+ P++ Y +LS
Sbjct: 502 DKLFQLAPEQSGYYVLLS 519
Score = 53.9 bits (128), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 66/140 (47%), Gaps = 2/140 (1%)
Query: 385 VGNALIDMYCKCGDVEKAQRVFREMLRKDKFTWTAMIVGLAINGHGDKSLDMFSQMLRAS 444
+G L+ Y DV A++VF E+ ++ MI NG + + +F M +
Sbjct: 76 LGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCN 135
Query: 445 IIPDEVTYVGVLSACTHTGMVDEGREYFADMTIQHGIEPNEAHYGCMVDLLGRAGHLNEA 504
+ PD T+ VL AC+ +G + GR+ T + G+ +V + G+ G L+EA
Sbjct: 136 VRPDHYTFPCVLKACSCSGTIVIGRKIHGSAT-KVGLSSTLFVGNGLVSMYGKCGFLSEA 194
Query: 505 LEVIKNMPMKPNSIVWGALL 524
V+ M + + + W +L+
Sbjct: 195 RLVLDEMSRR-DVVSWNSLV 213
>sp|Q56XI1|PPR25_ARATH Pentatricopeptide repeat-containing protein At1g09410
OS=Arabidopsis thaliana GN=PCMP-H18 PE=2 SV=2
Length = 705
Score = 441 bits (1135), Expect = e-123, Method: Compositional matrix adjust.
Identities = 239/662 (36%), Positives = 369/662 (55%), Gaps = 49/662 (7%)
Query: 61 EKGDMKYACKVFRKIPRPSVCLWNTMIKGYSRIDSHKNGVLIYLDMLKSDVRPDNYTFPF 120
+ G++ A KVF +P +V W ++KGY H V + + + ++
Sbjct: 91 KNGEIDEARKVFDLMPERNVVSWTALVKGYV----HNGKVDVAESLFWKMPEKNKVSWTV 146
Query: 121 LLKGFTRDIAVEFGKELHCHVLKFGFDSSVFVQNALISTYCLCGEVDMARGIFDVSYKDD 180
+L GF +D ++ C + + D + ++I C G VD AR IFD +
Sbjct: 147 MLIGFLQDGRIDDA----CKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERS 202
Query: 181 VVTWNAMFSGYKRVKQFDETRKLFGEMERKGVLPTSVTIVLVLSACAKLKDLDVGKRAHR 240
V+TW M +GY + + D+ RK+F M K T V+ +L
Sbjct: 203 VITWTTMVTGYGQNNRVDDARKIFDVMPEK----TEVSWTSMLMG--------------- 243
Query: 241 YVKECKIVPNLILENALTDMYAACGEMGFALEIFGNIKNKDVISWTAIVTGYINRGQVDM 300
Y G + A E+F + K VI+ A+++G +G++
Sbjct: 244 --------------------YVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAK 283
Query: 301 ARQYFDQMPERDYVLWTAMIDGYLRVNRFREALTLFREMQTSNIRPDEFTIVSILTACAN 360
AR+ FD M ER+ W +I + R EAL LF MQ +RP T++SIL+ CA+
Sbjct: 284 ARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCAS 343
Query: 361 LGALELGEWVKTYIDKNKVKNDIFVGNALIDMYCKCGDVEKAQRVFREMLRKDKFTWTAM 420
L +L G+ V + + + D++V + L+ MY KCG++ K++ +F KD W ++
Sbjct: 344 LASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSI 403
Query: 421 IVGLAINGHGDKSLDMFSQM-LRASIIPDEVTYVGVLSACTHTGMVDEGREYFADMTIQH 479
I G A +G G+++L +F +M L S P+EVT+V LSAC++ GMV+EG + + M
Sbjct: 404 ISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVF 463
Query: 480 GIEPNEAHYGCMVDLLGRAGHLNEALEVIKNMPMKPNSIVWGALLGACRVHRDAEMAEMA 539
G++P AHY CMVD+LGRAG NEA+E+I +M ++P++ VWG+LLGACR H ++AE
Sbjct: 464 GVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFC 523
Query: 540 AKQILELDPDNEAVYVLLCNIYAACNRWDNFRELRQMILDRGIKKTPGCSMIEMNGVVHE 599
AK+++E++P+N Y+LL N+YA+ RW + ELR+++ R ++K+PGCS E+ VH
Sbjct: 524 AKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHA 583
Query: 600 FVAGD-KSHPQTKEIYLKLDEMTSDLKFVGYMPDISEVFLDVGEEDKERAVYQHSEKLAM 658
F G SHP+ + I LDE+ L+ GY PD S DV EE+K ++ HSE+LA+
Sbjct: 584 FTRGGINSHPEQESILKILDELDGLLREAGYNPDCSYALHDVDEEEKVNSLKYHSERLAV 643
Query: 659 AFGLISSGPGVTIRIVKNLRMCVDCHRMAKLVSMVYDREVIVRDKTRFHHFKHGSCSCKD 718
A+ L+ G+ IR++KNLR+C DCH K++S V +RE+I+RD RFHHF++G CSCKD
Sbjct: 644 AYALLKLSEGIPIRVMKNLRVCSDCHTAIKIISKVKEREIILRDANRFHHFRNGECSCKD 703
Query: 719 YW 720
YW
Sbjct: 704 YW 705
Score = 132 bits (332), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 128/532 (24%), Positives = 210/532 (39%), Gaps = 131/532 (24%)
Query: 32 LKQIHSQTIKLGLLTNPTVQNKLVTFCCSEKGDMKYACKVFRKIPRPSVCLWNTMIKGYS 91
L++ +S TI P N +T S G + A K+F S+ WN+M+ GY
Sbjct: 7 LRRTYSTTIP------PPTANVRITHL-SRIGKIHEARKLFDSCDSKSISSWNSMVAGY- 58
Query: 92 RIDSHKNGVLIYLDMLKSDVRPDNYTFPFLLKGFTRDIAVEFGKELHCHVLKFGFDSSVF 151
+ +++ D R P D ++
Sbjct: 59 -----------FANLMPRDARKLFDEMP---------------------------DRNII 80
Query: 152 VQNALISTYCLCGEVDMARGIFDVSYKDDVVTWNAMFSGYKRVKQFDETRKLFGEMERKG 211
N L+S Y GE+D AR +FD+ + +VV+W A+ GY + D LF +M K
Sbjct: 81 SWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKN 140
Query: 212 VLPTSVTIVLVLSACAKLKDLDVGKRAHRYVKECKIVPNL--ILENALTDMYAACGEMGF 269
+ +V ++ L+D + Y +++P+ I ++ G +
Sbjct: 141 KVSWTVMLI------GFLQDGRIDDACKLY----EMIPDKDNIARTSMIHGLCKEGRVDE 190
Query: 270 ALEIFGNIKNKDVISWTAIVTGYINRGQVDMARQYFDQMPERDYVLWTAMIDGYLRVNRF 329
A EIF + + VI+WT +VTGY +VD AR+ FD MPE+ V WT+M+ GY++ R
Sbjct: 191 AREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRI 250
Query: 330 REALTLFREMQTSNIRPDEFTIVSILTACANLGALELGEWVKTYIDKNKVKNDIFVGNAL 389
+A LF M ++P + AC NA+
Sbjct: 251 EDAEELFEVMP---VKP--------VIAC----------------------------NAM 271
Query: 390 IDMYCKCGDVEKAQRVFREMLRKDKFTWTAMIVGLAINGHGDKSLDMFSQMLRASIIPDE 449
I + G++ KA+RVF M ++ +W +I NG ++LD+F M + + P
Sbjct: 272 ISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTF 331
Query: 450 VTYVGVLSACTHTGMVDEGRE--------------YFADMTIQHGIEPNE---------- 485
T + +LS C + G++ Y A + + I+ E
Sbjct: 332 PTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDR 391
Query: 486 ------AHYGCMVDLLGRAGHLNEALEVIKNMPM----KPNSIVWGALLGAC 527
+ ++ G EAL+V MP+ KPN + + A L AC
Sbjct: 392 FPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSAC 443
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 133/323 (41%), Gaps = 62/323 (19%)
Query: 19 LISPIETCESM---HQLKQIHSQTIKLGLLTNPTVQNKLVTFCCSEKGDMKYACKVFRKI 75
LIS + C S+ H KQ+H+Q ++ + V + L+T + G++ + +F +
Sbjct: 334 LISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYI-KCGELVKSKLIFDRF 392
Query: 76 PRPSVCLWNTMIKGYSRIDSHKNGVLIYLDM-LKSDVRPDNYTFPFLLKGFTRDIAVEFG 134
P + +WN++I GY+ + + ++ +M L +P+ TF L + VE G
Sbjct: 393 PSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEG 452
Query: 135 KELHCHVLKFGFDSSVFVQNALISTY-CLCGEVDMARGIFDVSYKDDVVTWNAMFSGYKR 193
+++ + SVF + + Y C+ VDM R
Sbjct: 453 LKIYESM------ESVFGVKPITAHYACM---VDM----------------------LGR 481
Query: 194 VKQFDETRKLFGEMERKGVLPTSVTIVLVLSACAKLKDLDVGKRAHRYVKECKIVPNLIL 253
+F+E ++ M V P + +L AC LDV + + + E I P
Sbjct: 482 AGRFNEAMEMIDSMT---VEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIE--IEP---- 532
Query: 254 ENA-----LTDMYAACGEMGFALEIFGNIKNKDV-----ISWTAIVTGYINRGQVDMARQ 303
EN+ L++MYA+ G E+ +K + V SWT + N+ R
Sbjct: 533 ENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVE----NKVHA-FTRG 587
Query: 304 YFDQMPERDYVLWTA-MIDGYLR 325
+ PE++ +L +DG LR
Sbjct: 588 GINSHPEQESILKILDELDGLLR 610
>sp|Q9M4P3|PP316_ARATH Pentatricopeptide repeat-containing protein At4g16835,
mitochondrial OS=Arabidopsis thaliana GN=DYW10 PE=2 SV=3
Length = 656
Score = 440 bits (1132), Expect = e-122, Method: Compositional matrix adjust.
Identities = 243/687 (35%), Positives = 361/687 (52%), Gaps = 83/687 (12%)
Query: 40 IKLGLLTNPTVQNKLVTFC-----CSEKGDMKYACKVFRKIPRPSVCLWNTMIKGYSRID 94
++ LT P+ Q+++ C GD+ A +VF + + WN+++ G S+
Sbjct: 47 VRSDYLTKPSDQDQIFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDP 106
Query: 95 SHKNGVLIYLDMLKSDVRPDNYTFPFLLKGFTRDIAVEFGKELHCHVLKFGFDSSVFVQN 154
S D + PD +++ +L + R++ E
Sbjct: 107 SRMMEAHQLFDEIPE---PDTFSYNIMLSCYVRNVNFE---------------------- 141
Query: 155 ALISTYCLCGEVDMARGIFDVSYKDDVVTWNAMFSGYKRVKQFDETRKLFGEMERKGVLP 214
A+ FD D +WN M +GY R + ++ R+LF M K
Sbjct: 142 -------------KAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMMEK---- 184
Query: 215 TSVTIVLVLSACAKLKDLDVGKRAHRYVKECKIVPNLILENALTDMYAACGEMGFALEIF 274
N + NA+ Y CG++ A F
Sbjct: 185 -----------------------------------NEVSWNAMISGYIECGDLEKASHFF 209
Query: 275 GNIKNKDVISWTAIVTGYINRGQVDMARQYFDQMP-ERDYVLWTAMIDGYLRVNRFREAL 333
+ V++WTA++TGY+ +V++A F M ++ V W AMI GY+ +R + L
Sbjct: 210 KVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGL 269
Query: 334 TLFREMQTSNIRPDEFTIVSILTACANLGALELGEWVKTYIDKNKVKNDIFVGNALIDMY 393
LFR M IRP+ + S L C+ L AL+LG + + K+ + ND+ +LI MY
Sbjct: 270 KLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMY 329
Query: 394 CKCGDVEKAQRVFREMLRKDKFTWTAMIVGLAINGHGDKSLDMFSQMLRASIIPDEVTYV 453
CKCG++ A ++F M +KD W AMI G A +G+ DK+L +F +M+ I PD +T+V
Sbjct: 330 CKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFV 389
Query: 454 GVLSACTHTGMVDEGREYFADMTIQHGIEPNEAHYGCMVDLLGRAGHLNEALEVIKNMPM 513
VL AC H G+V+ G YF M + +EP HY CMVDLLGRAG L EAL++I++MP
Sbjct: 390 AVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPF 449
Query: 514 KPNSIVWGALLGACRVHRDAEMAEMAAKQILELDPDNEAVYVLLCNIYAACNRWDNFREL 573
+P++ V+G LLGACRVH++ E+AE AA+++L+L+ N A YV L NIYA+ NRW++ +
Sbjct: 450 RPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARV 509
Query: 574 RQMILDRGIKKTPGCSMIEMNGVVHEFVAGDKSHPQTKEIYLKLDEMTSDLKFVGYMPDI 633
R+ + + + K PG S IE+ VH F + D+ HP+ I+ KL E+ +K GY P++
Sbjct: 510 RKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRIHPELDSIHKKLKELEKKMKLAGYKPEL 569
Query: 634 SEVFLDVGEEDKERAVYQHSEKLAMAFGLISSGPGVTIRIVKNLRMCVDCHRMAKLVSMV 693
+V EE KE+ + HSEKLA+AFG I G I++ KNLR+C DCH+ K +S +
Sbjct: 570 EFALHNVEEEQKEKLLLWHSEKLAVAFGCIKLPQGSQIQVFKNLRICGDCHKAIKFISEI 629
Query: 694 YDREVIVRDKTRFHHFKHGSCSCKDYW 720
RE+IVRD TRFHHFK GSCSC DYW
Sbjct: 630 EKREIIVRDTTRFHHFKDGSCSCGDYW 656
Score = 133 bits (335), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 108/440 (24%), Positives = 184/440 (41%), Gaps = 81/440 (18%)
Query: 7 ISPPSTLTQETPLISPIETC----ESMHQLKQIHSQTIKLGLLTNPTVQNKLVTFCCSEK 62
++ PS Q PL I C + L+ H K N N L+ +
Sbjct: 52 LTKPSDQDQIFPLNKIIARCVRSGDIDGALRVFHGMRAK-----NTITWNSLLIGISKDP 106
Query: 63 GDMKYACKVFRKIPRPSVCLWNTMIKGYSRIDSHKNGVLIYLDMLKSDVRPDNYTFPFLL 122
M A ++F +IP P +N M+ Y R + + + M D N ++
Sbjct: 107 SRMMEAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNT----MI 162
Query: 123 KGFTRDIAVEFGKELHCHVLKFGFDSSVFVQNALISTYCLCGEVDMARGIFDVSYKDDVV 182
G+ R +E +EL ++ + + NA+IS Y CG+++ A F V+ VV
Sbjct: 163 TGYARRGEMEKARELFYSMM----EKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVV 218
Query: 183 TWNAMFSGYKRVKQF--------------------------------DETRKLFGEMERK 210
W AM +GY + K+ ++ KLF M +
Sbjct: 219 AWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEE 278
Query: 211 GVLPTSVTIVLVLSACAKLKDLDVGKRAHRYVKECKIVPNLILENALTDMYAACGEMGFA 270
G+ P S + L C++L L +G++ H+ V + + ++ +L MY CGE+G A
Sbjct: 279 GIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDA 338
Query: 271 LEIFGNIKNKDVISWTAIVTGYINRGQVDMARQYFDQMPERDYVLWTAMIDGYLRVNRFR 330
++F +K KDV++W A+++GY G D
Sbjct: 339 WKLFEVMKKKDVVAWNAMISGYAQHGNAD------------------------------- 367
Query: 331 EALTLFREMQTSNIRPDEFTIVSILTACANLGALELG-EWVKTYIDKNKVKNDIFVGNAL 389
+AL LFREM + IRPD T V++L AC + G + +G + ++ + KV+ +
Sbjct: 368 KALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCM 427
Query: 390 IDMYCKCGDVEKAQRVFREM 409
+D+ + G +E+A ++ R M
Sbjct: 428 VDLLGRAGKLEEALKLIRSM 447
>sp|Q9ZVF4|PP140_ARATH Pentatricopeptide repeat-containing protein At2g01510,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H37 PE=3
SV=1
Length = 584
Score = 440 bits (1131), Expect = e-122, Method: Compositional matrix adjust.
Identities = 231/588 (39%), Positives = 339/588 (57%), Gaps = 33/588 (5%)
Query: 135 KELHCHVLKFGFDSSVFVQNALISTYCLCGEVDMARGIFDVSYKDDVVTWNAMFSGYKRV 194
K++H VL+ GF + L+ + G++ AR +FD +K + WN +F GY R
Sbjct: 28 KKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRN 87
Query: 195 KQFDETRKLFGEMERKGVLPTSVTIVLVLSACAKLKDLDVGKRAHRYVKECKIVPNLILE 254
+ E+ L+ +M GV P T V+ A ++L D G H +V
Sbjct: 88 QLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHV------------ 135
Query: 255 NALTDMYAACGEMGFALEIFGNIKNKDVISWTAIVTGYINRGQVDMARQYFDQMPERDYV 314
+ + G I T +V Y+ G++ A F+ M +D V
Sbjct: 136 ------------VKYGFGCLG-------IVATELVMMYMKFGELSSAEFLFESMQVKDLV 176
Query: 315 LWTAMIDGYLRVNRFREALTLFREMQTSNIRPDEFTIVSILTACANLGALELGEWVKTYI 374
W A + ++ AL F +M ++ D FT+VS+L+AC LG+LE+GE +
Sbjct: 177 AWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRA 236
Query: 375 DKNKVKNDIFVGNALIDMYCKCGDVEKAQRVFREMLRKDKFTWTAMIVGLAINGHGDKSL 434
K ++ +I V NA +DM+ KCG+ E A+ +F EM +++ +W+ MIVG A+NG ++L
Sbjct: 237 RKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREAL 296
Query: 435 DMFSQMLRASIIPDEVTYVGVLSACTHTGMVDEGREYFADMTIQH--GIEPNEAHYGCMV 492
+F+ M + P+ VT++GVLSAC+H G+V+EG+ YF+ M + +EP + HY CMV
Sbjct: 297 TLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMV 356
Query: 493 DLLGRAGHLNEALEVIKNMPMKPNSIVWGALLGACRVHRDAEMAEMAAKQILELDPDNEA 552
DLLGR+G L EA E IK MP++P++ +WGALLGAC VHRD + + A ++E PD +
Sbjct: 357 DLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGS 416
Query: 553 VYVLLCNIYAACNRWDNFRELRQMILDRGIKKTPGCSMIEMNGVVHEFVAGDKSHPQTKE 612
+VLL NIYAA +WD ++R + G KK S +E G +H F GDKSHPQ+K
Sbjct: 417 YHVLLSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKA 476
Query: 613 IYLKLDEMTSDLKFVGYMPDISEVFLDVGEEDKERAVYQHSEKLAMAFGLISSGPGVTIR 672
IY KLDE+ ++ +GY+PD VF DV E+KE ++ HSEKLA+AFGLI PG IR
Sbjct: 477 IYEKLDEILKKIRKMGYVPDTCSVFHDVEMEEKECSLSHHSEKLAIAFGLIKGRPGHPIR 536
Query: 673 IVKNLRMCVDCHRMAKLVSMVYDREVIVRDKTRFHHFKHGSCSCKDYW 720
++KNLR C DCH +K VS + E+I+RDK RFHHF++G CSCK++W
Sbjct: 537 VMKNLRTCDDCHAFSKFVSSLTSTEIIMRDKNRFHHFRNGVCSCKEFW 584
Score = 177 bits (448), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 146/557 (26%), Positives = 244/557 (43%), Gaps = 82/557 (14%)
Query: 13 LTQETPLISPI------ETCESMHQLKQIHSQTIKLGL-----LTNPTVQNKLVTFCCSE 61
L ++TPL + + QLK+IH+ ++ G L ++N +V
Sbjct: 2 LAKQTPLTKQMLSELLRASSSKPKQLKKIHAIVLRTGFSEKNSLLTQLLENLVVI----- 56
Query: 62 KGDMKYACKVFRKIPRPSVCLWNTMIKGYSRIDSHKNGVLIYLDMLKSDVRPDNYTFPFL 121
GDM YA +VF ++ +P + LWNT+ KGY R +L+Y M VRPD +T+PF+
Sbjct: 57 -GDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFV 115
Query: 122 LKGFTRDIAVEFGKELHCHVLKFGFDSSVFVQNALISTYCLCGEVDMARGIFDVSYKDDV 181
+K ++ G LH HV+K+GF V L+ Y GE+ A +F+ D+
Sbjct: 116 VKAISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDL 175
Query: 182 VTWNAMFSGYKRVKQFDETRKLFGEMERKGVLPTSVTIVLVLSACAKLKDLDVGKRAHRY 241
V WNA + + + F +M V S T+V +LSAC +L L++G+ +
Sbjct: 176 VAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDR 235
Query: 242 VKECKIVPNLILENALTDMYAACGEMGFALEIFGNIKNKDVISWTAIVTGYINRGQVDMA 301
++ +I N+I+ENA DM+ CG A +F +K ++V+SW+ ++ GY G
Sbjct: 236 ARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDS--- 292
Query: 302 RQYFDQMPERDYVLWTAMIDGYLRVNRFREALTLFREMQTSNIRPDEFTIVSILTACANL 361
REALTLF MQ +RP+ T + +L+AC++
Sbjct: 293 ----------------------------REALTLFTTMQNEGLRPNYVTFLGVLSACSHA 324
Query: 362 GALELGEWVKTYI----DKN-KVKNDIFVGNALIDMYCKCGDVEKAQRVFREM-LRKDKF 415
G + G+ + + DKN + + + + ++D+ + G +E+A ++M + D
Sbjct: 325 GLVNEGKRYFSLMVQSNDKNLEPRKEHYA--CMVDLLGRSGLLEEAYEFIKKMPVEPDTG 382
Query: 416 TWTAMIVGLAINGHGDKSLDMFSQMLRASIIPDEVTYVGVLS----ACTHTGMVDEGREY 471
W A++ A+ H D L + PD +Y +LS A VD+ R
Sbjct: 383 IWGALLGACAV--HRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSK 440
Query: 472 FADMTIQHGIEPNEAHYGCMVDLLGRAG-----------HLNEALEVIKNMPMKPNSIVW 520
+ + + + + R L+E L+ I+ M P++
Sbjct: 441 MRKLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIRKMGYVPDT--- 497
Query: 521 GALLGACRVHRDAEMAE 537
C V D EM E
Sbjct: 498 ------CSVFHDVEMEE 508
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600
OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1
Length = 697
Score = 439 bits (1128), Expect = e-122, Method: Compositional matrix adjust.
Identities = 227/617 (36%), Positives = 359/617 (58%), Gaps = 12/617 (1%)
Query: 16 ETPLISPIETCESMHQLKQIHSQTIKLGLLTNPTVQNKLVTFCCSEKGDMKYACKVFRKI 75
+ LI C S+ +Q+ + + + T +V L G + A +FR +
Sbjct: 58 QNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKL-----GFLDEADSLFRSM 112
Query: 76 PRPSVCLWNTMIKGYSRIDSHKNGVLIYLDMLKSDVRPDNYTFPFLLKGFTRDIAVEFGK 135
P C WN+M+ G+++ D + + + M K + Y+F +L + + G
Sbjct: 113 PERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGV 172
Query: 136 ELHCHVLKFGFDSSVFVQNALISTYCLCGEVDMARGIFDVSYKDDVVTWNAMFSGYKRVK 195
++H + K F S V++ +AL+ Y CG V+ A+ +FD +VV+WN++ + +++
Sbjct: 173 QVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNG 232
Query: 196 QFDETRKLFGEMERKGVLPTSVTIVLVLSACAKLKDLDVGKRAH-RYVKECKIVPNLILE 254
E +F M V P VT+ V+SACA L + VG+ H R VK K+ ++IL
Sbjct: 233 PAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILS 292
Query: 255 NALTDMYAACGEMGFALEIFGNIKNKDVISWTAIVTGYINRGQVDMARQYFDQMPERDYV 314
NA DMYA C + A IF ++ ++VI+ T++++GY AR F +M ER+ V
Sbjct: 293 NAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVV 352
Query: 315 LWTAMIDGYLRVNRFREALTLFREMQTSNIRPDEFTIVSILTACANLGALELGEWVKTYI 374
W A+I GY + EAL+LF ++ ++ P ++ +IL ACA+L L LG ++
Sbjct: 353 SWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHV 412
Query: 375 DKNKVK------NDIFVGNALIDMYCKCGDVEKAQRVFREMLRKDKFTWTAMIVGLAING 428
K+ K +DIFVGN+LIDMY KCG VE+ VFR+M+ +D +W AMI+G A NG
Sbjct: 413 LKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNG 472
Query: 429 HGDKSLDMFSQMLRASIIPDEVTYVGVLSACTHTGMVDEGREYFADMTIQHGIEPNEAHY 488
+G+++L++F +ML + PD +T +GVLSAC H G V+EGR YF+ MT G+ P HY
Sbjct: 473 YGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHY 532
Query: 489 GCMVDLLGRAGHLNEALEVIKNMPMKPNSIVWGALLGACRVHRDAEMAEMAAKQILELDP 548
CMVDLLGRAG L EA +I+ MPM+P+S++WG+LL AC+VHR+ + + A+++LE++P
Sbjct: 533 TCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEP 592
Query: 549 DNEAVYVLLCNIYAACNRWDNFRELRQMILDRGIKKTPGCSMIEMNGVVHEFVAGDKSHP 608
N YVLL N+YA +W++ +R+ + G+ K PGCS I++ G H F+ DKSHP
Sbjct: 593 SNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHP 652
Query: 609 QTKEIYLKLDEMTSDLK 625
+ K+I+ LD + ++++
Sbjct: 653 RKKQIHSLLDILIAEMR 669
Score = 177 bits (448), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 115/480 (23%), Positives = 212/480 (44%), Gaps = 101/480 (21%)
Query: 114 DNYTFPFLLKGFTRD-IAVEFGKELHCHVLKFGFDSSVFVQNALISTYCLCGEVDMARGI 172
D+ F LL + ++ + + +H V+K GF + +F+QN LI Y CG ++ R +
Sbjct: 18 DSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQV 77
Query: 173 FDVSYKDDVVTWNAMFSGYKRVKQFDETRKL----------------------------- 203
FD + ++ TWN++ +G ++ DE L
Sbjct: 78 FDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEAL 137
Query: 204 --FGEMERKGVLPTSVTIVLVLSACAKLKDLDVGKRAHRYVKECKIVPNLILENALTDMY 261
F M ++G + + VLSAC+ L D++ G + H + + + ++ + +AL DMY
Sbjct: 138 CYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMY 197
Query: 262 AACGEMGFALEIFGNIKNKDVISWTAIVTGYINRGQVDMARQYFDQMPERDYVLWTAMID 321
+ CG + A +F + +++V+SW +++T + G
Sbjct: 198 SKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPA----------------------- 234
Query: 322 GYLRVNRFREALTLFREMQTSNIRPDEFTIVSILTACANLGALELGEWVKTYIDKN-KVK 380
EAL +F+ M S + PDE T+ S+++ACA+L A+++G+ V + KN K++
Sbjct: 235 --------VEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLR 286
Query: 381 NDIFVGNALIDMYCKCGDVEKAQRV-------------------------------FREM 409
NDI + NA +DMY KC +++A+ + F +M
Sbjct: 287 NDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKM 346
Query: 410 LRKDKFTWTAMIVGLAINGHGDKSLDMFSQMLRASIIPDEVTYVGVLSACT-----HTGM 464
++ +W A+I G NG +++L +F + R S+ P ++ +L AC H GM
Sbjct: 347 AERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGM 406
Query: 465 VDEGREYFADMTIQHGIEPNEAHYGCMVDLLGRAGHLNEALEVIKNMPMKPNSIVWGALL 524
Q G E + ++D+ + G + E V + M M+ + + W A++
Sbjct: 407 QAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKM-MERDCVSWNAMI 465
Score = 176 bits (447), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 99/351 (28%), Positives = 171/351 (48%), Gaps = 14/351 (3%)
Query: 222 VLSACAKLKDLDVGKR-AHRYVKECKIVPNLILENALTDMYAACGEMGFALEIFGNIKNK 280
+L +C K K + R H V + + ++N L D Y+ CG + ++F + +
Sbjct: 25 LLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQR 84
Query: 281 DVISWTAIVTGYINRGQVDMARQYFDQMPERDYVLWTAMIDGYLRVNRFREALTLFREMQ 340
++ +W ++VTG G +D A F MPERD W +M+ G+ + +R EAL F M
Sbjct: 85 NIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMH 144
Query: 341 TSNIRPDEFTIVSILTACANLGALELGEWVKTYIDKNKVKNDIFVGNALIDMYCKCGDVE 400
+E++ S+L+AC+ L + G V + I K+ +D+++G+AL+DMY KCG+V
Sbjct: 145 KEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVN 204
Query: 401 KAQRVFREMLRKDKFTWTAMIVGLAINGHGDKSLDMFSQMLRASIIPDEVTYVGVLSACT 460
AQRVF EM ++ +W ++I NG ++LD+F ML + + PDEVT V+SAC
Sbjct: 205 DAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACA 264
Query: 461 HTGMVDEGREYFADMTIQHGIEPNEAHYGCMVDLLGRAGHLNEALEVIKNMPMK----PN 516
+ G+E + + + VD+ + + EA + +MP++
Sbjct: 265 SLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAET 324
Query: 517 SIVWGALLGACRVHRDAEMAEMAAKQILELDP---------DNEAVYVLLC 558
S++ G + A +MA + ++ + +NE L C
Sbjct: 325 SMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFC 375
>sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protein At3g03580
OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1
Length = 882
Score = 437 bits (1124), Expect = e-121, Method: Compositional matrix adjust.
Identities = 240/656 (36%), Positives = 373/656 (56%), Gaps = 37/656 (5%)
Query: 68 ACKVFRKIPRPSVCLWNTMIKGYSRIDSHKNGVLIYLDMLKSDVRPDNYTFPFLLK--GF 125
A +VF ++ +NTMI GY +++ + V ++L+ L +PD T +L+ G
Sbjct: 261 ARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENL-DQFKPDLLTVSSVLRACGH 319
Query: 126 TRDIAVEFGKELHCHVLKFGFDSSVFVQNALISTYCLCGEVDMARGIFDVSYKDDVVTWN 185
RD+++ K ++ ++LK GF V+N LI Y CG++ AR +F+ D V+WN
Sbjct: 320 LRDLSL--AKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWN 377
Query: 186 AMFSGYKRVKQFDETRKLFGEMERKGVLPTSVTIVLVLSACAKLKDLDVGKRAHRYVKEC 245
++ SGY + E KLF M +T ++++S +L DL GK H +
Sbjct: 378 SIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKS 437
Query: 246 KIVPNLILENALTDMYAACGEMGFALEIFGNIKNKDVISWTAIVTGYINRGQVDMARQYF 305
I +L + NAL DMYA CGE+G +L+IF +
Sbjct: 438 GICIDLSVSNALIDMYAKCGEVGDSLKIFSS----------------------------- 468
Query: 306 DQMPERDYVLWTAMIDGYLRVNRFREALTLFREMQTSNIRPDEFTIVSILTACANLGALE 365
M D V W +I +R F L + +M+ S + PD T + L CA+L A
Sbjct: 469 --MGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKR 526
Query: 366 LGEWVKTYIDKNKVKNDIFVGNALIDMYCKCGDVEKAQRVFREMLRKDKFTWTAMIVGLA 425
LG+ + + + ++++ +GNALI+MY KCG +E + RVF M R+D TWT MI
Sbjct: 527 LGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYG 586
Query: 426 INGHGDKSLDMFSQMLRASIIPDEVTYVGVLSACTHTGMVDEGREYFADMTIQHGIEPNE 485
+ G G+K+L+ F+ M ++ I+PD V ++ ++ AC+H+G+VDEG F M + I+P
Sbjct: 587 MYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMI 646
Query: 486 AHYGCMVDLLGRAGHLNEALEVIKNMPMKPNSIVWGALLGACRVHRDAEMAEMAAKQILE 545
HY C+VDLL R+ +++A E I+ MP+KP++ +W ++L ACR D E AE +++I+E
Sbjct: 647 EHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIE 706
Query: 546 LDPDNEAVYVLLCNIYAACNRWDNFRELRQMILDRGIKKTPGCSMIEMNGVVHEFVAGDK 605
L+PD+ +L N YAA +WD +R+ + D+ I K PG S IE+ VH F +GD
Sbjct: 707 LNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDD 766
Query: 606 SHPQTKEIYLKLDEMTSDLKFVGYMPDISEVFLDV-GEEDKERAVYQHSEKLAMAFGLIS 664
S PQ++ IY L+ + S + GY+PD EV ++ EE+K R + HSE+LA+AFGL++
Sbjct: 767 SAPQSEAIYKSLEILYSLMAKEGYIPDPREVSQNLEEEEEKRRLICGHSERLAIAFGLLN 826
Query: 665 SGPGVTIRIVKNLRMCVDCHRMAKLVSMVYDREVIVRDKTRFHHFKHGSCSCKDYW 720
+ PG ++++KNLR+C DCH + KL+S + RE++VRD RFH FK G+CSCKD W
Sbjct: 827 TEPGTPLQVMKNLRVCGDCHEVTKLISKIVGREILVRDANRFHLFKDGTCSCKDRW 882
Score = 197 bits (501), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 134/513 (26%), Positives = 249/513 (48%), Gaps = 37/513 (7%)
Query: 17 TPLIS-PIETCESMHQLKQIHSQTIKLGLLTNPTVQNKLVTFCCSEKGDMKYACKVFRKI 75
+P IS + + ++++L++IH+ I LGL ++ KL+ S + + VFR++
Sbjct: 7 SPFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLID-KYSHFREPASSLSVFRRV 65
Query: 76 -PRPSVCLWNTMIKGYSRIDSHKNGVLIYLDMLKSDVRPDNYTFPFLLKGFTRDIAVEFG 134
P +V LWN++I+ +S+ + Y + +S V PD YTFP ++K E G
Sbjct: 66 SPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMG 125
Query: 135 KELHCHVLKFGFDSSVFVQNALISTYCLCGEVDMARGIFDVSYKDDVVTWNAMFSGYKRV 194
++ +L GF+S +FV NAL+ Y G + AR +FD D+V+WN++ SGY
Sbjct: 126 DLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSH 185
Query: 195 KQFDETRKLFGEMERKGVLPTSVTIVLVLSACAKLKDLDVGKRAHRYVKECKIVPNLILE 254
++E +++ E++ ++P S T+ VL A L + G+ H + + + +++
Sbjct: 186 GYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVN 245
Query: 255 NALTDMYAACGEMGFALEIFGNIKNKDVISWTAIVTGYINRGQVDMARQYFDQMPERDYV 314
N L MY A +F + +D +S
Sbjct: 246 NGLVAMYLKFRRPTDARRVFDEMDVRDSVS------------------------------ 275
Query: 315 LWTAMIDGYLRVNRFREALTLFREMQTSNIRPDEFTIVSILTACANLGALELGEWVKTYI 374
+ MI GYL++ E++ +F E +PD T+ S+L AC +L L L +++ Y+
Sbjct: 276 -YNTMICGYLKLEMVEESVRMFLE-NLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYM 333
Query: 375 DKNKVKNDIFVGNALIDMYCKCGDVEKAQRVFREMLRKDKFTWTAMIVGLAINGHGDKSL 434
K + V N LID+Y KCGD+ A+ VF M KD +W ++I G +G +++
Sbjct: 334 LKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAM 393
Query: 435 DMFSQMLRASIIPDEVTYVGVLSACTHTGMVDEGREYFADMTIQHGIEPNEAHYGCMVDL 494
+F M+ D +TY+ ++S T + G+ ++ I+ GI + + ++D+
Sbjct: 394 KLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSN-GIKSGICIDLSVSNALIDM 452
Query: 495 LGRAGHLNEALEVIKNMPMKPNSIVWGALLGAC 527
+ G + ++L++ +M +++ W ++ AC
Sbjct: 453 YAKCGEVGDSLKIFSSMGTG-DTVTWNTVISAC 484
Score = 182 bits (462), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 137/519 (26%), Positives = 241/519 (46%), Gaps = 38/519 (7%)
Query: 21 SPIETCESMHQLKQ---IHSQTIKLGLLTNPTVQNKLVTFCCSEKGDMKYACKVFRKIPR 77
S I+ C + + ++ Q + +G ++ V N LV S G + A +VF ++P
Sbjct: 111 SVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMY-SRMGLLTRARQVFDEMPV 169
Query: 78 PSVCLWNTMIKGYSRIDSHKNGVLIYLDMLKSDVRPDNYTFPFLLKGFTRDIAVEFGKEL 137
+ WN++I GYS ++ + IY ++ S + PD++T +L F + V+ G+ L
Sbjct: 170 RDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGL 229
Query: 138 HCHVLKFGFDSSVFVQNALISTYCLCGEVDMARGIFDVSYKDDVVTWNAMFSGYKRVKQF 197
H LK G +S V V N L++ Y AR +FD D V++N M GY +++
Sbjct: 230 HGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMV 289
Query: 198 DETRKLFGEMERKGVLPTSVTIVLVLSACAKLKDLDVGKRAHRYVKECKIVPNLILENAL 257
+E+ ++F E P +T+ VL AC L+DL + K + Y+ + V + N L
Sbjct: 290 EESVRMFLE-NLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNIL 348
Query: 258 TDMYAACGEMGFALEIFGNIKNKDVISWTAIVTGYINRGQVDMARQYFDQMPERDYVLWT 317
D+YA CG+M +T AR F+ M +D V W
Sbjct: 349 IDVYAKCGDM---------------------IT----------ARDVFNSMECKDTVSWN 377
Query: 318 AMIDGYLRVNRFREALTLFREMQTSNIRPDEFTIVSILTACANLGALELGEWVKTYIDKN 377
++I GY++ EA+ LF+ M + D T + +++ L L+ G+ + + K+
Sbjct: 378 SIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKS 437
Query: 378 KVKNDIFVGNALIDMYCKCGDVEKAQRVFREMLRKDKFTWTAMIVGLAINGHGDKSLDMF 437
+ D+ V NALIDMY KCG+V + ++F M D TW +I G L +
Sbjct: 438 GICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVT 497
Query: 438 SQMLRASIIPDEVTYVGVLSACTHTGMVDEGREYFADMTIQHGIEPNEAHYGCMVDLLGR 497
+QM ++ ++PD T++ L C G+E + ++ G E ++++ +
Sbjct: 498 TQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCL-LRFGYESELQIGNALIEMYSK 556
Query: 498 AGHLNEALEVIKNMPMKPNSIVWGALLGACRVHRDAEMA 536
G L + V + M + + + W ++ A ++ + E A
Sbjct: 557 CGCLENSSRVFERMSRR-DVVTWTGMIYAYGMYGEGEKA 594
Score = 136 bits (343), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 108/401 (26%), Positives = 184/401 (45%), Gaps = 18/401 (4%)
Query: 21 SPIETCESMHQL---KQIHSQTIKLGLLTNPTVQNKLVTFCCSEKGDMKYACKVFRKIPR 77
S + C + L K I++ +K G + TV+N L+ ++ GDM A VF +
Sbjct: 312 SVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILID-VYAKCGDMITARDVFNSMEC 370
Query: 78 PSVCLWNTMIKGYSRIDSHKNGVLIYLDMLKSDVRPDNYTFPFLLKGFTRDIAVEFGKEL 137
WN++I GY + + ++ M+ + + D+ T+ L+ TR ++FGK L
Sbjct: 371 KDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGL 430
Query: 138 HCHVLKFGFDSSVFVQNALISTYCLCGEVDMARGIFDVSYKDDVVTWNAMFSGYKRVKQF 197
H + +K G + V NALI Y CGEV + IF D VTWN + S R F
Sbjct: 431 HSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDF 490
Query: 198 DETRKLFGEMERKGVLPTSVTIVLVLSACAKLKDLDVGKRAHRYVKECKIVPNLILENAL 257
++ +M + V+P T ++ L CA L +GK H + L + NAL
Sbjct: 491 ATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNAL 550
Query: 258 TDMYAACGEMGFALEIFGNIKNKDVISWTAIVTGYINRGQVDMARQYFDQMPER----DY 313
+MY+ CG + + +F + +DV++WT ++ Y G+ + A + F M + D
Sbjct: 551 IEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDS 610
Query: 314 VLWTAMIDGYLRVNRFREALTLFREMQTS-NIRP--DEFT-IVSILTACANLGALELGEW 369
V++ A+I E L F +M+T I P + + +V +L+ + E
Sbjct: 611 VVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAE---- 666
Query: 370 VKTYIDKNKVKNDIFVGNALIDMYCKCGDVEKAQRVFREML 410
+I +K D + +++ GD+E A+RV R ++
Sbjct: 667 --EFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRII 705
>sp|Q9SZT8|PP354_ARATH Pentatricopeptide repeat-containing protein At4g37380,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H48 PE=3
SV=1
Length = 632
Score = 436 bits (1122), Expect = e-121, Method: Compositional matrix adjust.
Identities = 211/564 (37%), Positives = 343/564 (60%), Gaps = 6/564 (1%)
Query: 159 TYCLCGEVDMARGIFDVSYKDDVVTWNAMFSGYKRVKQFDETRKLFGEMERKGVLPTSVT 218
Y G++ + +F + D+ + A + D+ L+ ++ + P T
Sbjct: 73 AYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFT 132
Query: 219 IVLVLSACAKLKDLDVGKRAHRYVKECKIVPNLILENALTDMYAACGEMGFALEIFGNIK 278
+L +C+ GK H +V + + + + L D+YA G++ A ++F +
Sbjct: 133 FSSLLKSCST----KSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMP 188
Query: 279 NKDVISWTAIVTGYINRGQVDMARQYFDQMPERDYVLWTAMIDGYLRVNRFREALTLFRE 338
+ ++S TA++T Y +G V+ AR FD M ERD V W MIDGY + +AL LF++
Sbjct: 189 ERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQK 248
Query: 339 M-QTSNIRPDEFTIVSILTACANLGALELGEWVKTYIDKNKVKNDIFVGNALIDMYCKCG 397
+ +PDE T+V+ L+AC+ +GALE G W+ ++ ++++ ++ V LIDMY KCG
Sbjct: 249 LLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCG 308
Query: 398 DVEKAQRVFREMLRKDKFTWTAMIVGLAINGHGDKSLDMFSQMLRAS-IIPDEVTYVGVL 456
+E+A VF + RKD W AMI G A++G+ +L +F++M + + P ++T++G L
Sbjct: 309 SLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTL 368
Query: 457 SACTHTGMVDEGREYFADMTIQHGIEPNEAHYGCMVDLLGRAGHLNEALEVIKNMPMKPN 516
AC H G+V+EG F M ++GI+P HYGC+V LLGRAG L A E IKNM M +
Sbjct: 369 QACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDAD 428
Query: 517 SIVWGALLGACRVHRDAEMAEMAAKQILELDPDNEAVYVLLCNIYAACNRWDNFRELRQM 576
S++W ++LG+C++H D + + A+ ++ L+ N +YVLL NIYA+ ++ ++R +
Sbjct: 429 SVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNL 488
Query: 577 ILDRGIKKTPGCSMIEMNGVVHEFVAGDKSHPQTKEIYLKLDEMTSDLKFVGYMPDISEV 636
+ ++GI K PG S IE+ VHEF AGD+ H ++KEIY L +++ +K GY+P+ + V
Sbjct: 489 MKEKGIVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPNTNTV 548
Query: 637 FLDVGEEDKERAVYQHSEKLAMAFGLISSGPGVTIRIVKNLRMCVDCHRMAKLVSMVYDR 696
D+ E +KE+++ HSE+LA+A+GLIS+ PG ++I KNLR+C DCH + KL+S + R
Sbjct: 549 LQDLEETEKEQSLQVHSERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISKITGR 608
Query: 697 EVIVRDKTRFHHFKHGSCSCKDYW 720
++++RD+ RFHHF GSCSC D+W
Sbjct: 609 KIVMRDRNRFHHFTDGSCSCGDFW 632
Score = 153 bits (386), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 111/446 (24%), Positives = 204/446 (45%), Gaps = 74/446 (16%)
Query: 23 IETCESMHQLKQIHSQTIKLGLLTNP--TVQNKLVTFCCSEKGDMKYACKVFRKIPRPSV 80
I+ +S+ ++ QIH+ ++ LL +P V N + + G ++++ +F + P +
Sbjct: 36 IDKSQSVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDL 95
Query: 81 CLWNTMIKGYSRIDSHKNGVLIYLDMLKSDVRPDNYTFPFLLKGFTRDIAVEFGKELHCH 140
L+ I S L+Y+ +L S++ P+ +TF LLK + + GK +H H
Sbjct: 96 FLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLK----SCSTKSGKLIHTH 151
Query: 141 VLKFGF-------------------------------DSSVFVQNALISTYCLCGEVDMA 169
VLKFG + S+ A+I+ Y G V+ A
Sbjct: 152 VLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAA 211
Query: 170 RGIFDVSYKDDVVTWNAMFSGYKRVKQFDETRKLFGEMERKG-VLPTSVTIVLVLSACAK 228
R +FD + D+V+WN M GY + ++ LF ++ +G P +T+V LSAC++
Sbjct: 212 RALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQ 271
Query: 229 LKDLDVGKRAHRYVKECKIVPNLILENALTDMYAACGEMGFALEIFGNIKNKDVISWTAI 288
+ L+ G+ H +VK +I N+ + L DMY+ CG + A+ +F + KD+++W A+
Sbjct: 272 IGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAM 331
Query: 289 VTGYINRGQVDMARQYFDQMPERDYVLWTAMIDGYLRVNRFREALTLFREMQ-TSNIRPD 347
+ GY + GY ++AL LF EMQ + ++P
Sbjct: 332 IAGY--------------------------AMHGY-----SQDALRLFNEMQGITGLQPT 360
Query: 348 EFTIVSILTACANLGALELGEWV-KTYIDKNKVKNDIFVGNALIDMYCKCGDVEKAQRVF 406
+ T + L ACA+ G + G + ++ + +K I L+ + + G +++A
Sbjct: 361 DITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETI 420
Query: 407 REM-LRKDKFTWTAMIVGLAINGHGD 431
+ M + D W++++ + HGD
Sbjct: 421 KNMNMDADSVLWSSVLGSCKL--HGD 444
>sp|O23169|PP353_ARATH Pentatricopeptide repeat-containing protein At4g37170
OS=Arabidopsis thaliana GN=PCMP-H5 PE=3 SV=1
Length = 691
Score = 435 bits (1119), Expect = e-121, Method: Compositional matrix adjust.
Identities = 227/621 (36%), Positives = 350/621 (56%), Gaps = 7/621 (1%)
Query: 104 LDMLKSDVRPDNYTFPFLLKGFTRDIAVEFGKELHCHVLKFGFDSSVFVQNALISTYCLC 163
+ +L +P T+ L++ ++ A+E GK++H H+ GF + + N L+ Y C
Sbjct: 74 VQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKC 133
Query: 164 GEVDMARGIFDVSYKDDVVTWNAMFSGYKRVKQFDETRKLFGEMERKGVLPTSVTIVLVL 223
G + AR +FD D+ +WN M +GY V +E RKLF EM K + + +
Sbjct: 134 GSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYV 193
Query: 224 SACAKLKDLDVGKRAHRYVKECKIVPNLILENALTDMYAACGEMGFALEIFGNIK----N 279
+ L + R PN+ + AA + EI G+I +
Sbjct: 194 KKDQPEEALVLYSLMQRVPNS---RPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLD 250
Query: 280 KDVISWTAIVTGYINRGQVDMARQYFDQMPERDYVLWTAMIDGYLRVNRFREALTLFREM 339
D + W++++ Y G +D AR FD++ E+D V WT+MID Y + +R+RE +LF E+
Sbjct: 251 SDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSEL 310
Query: 340 QTSNIRPDEFTIVSILTACANLGALELGEWVKTYIDKNKVKNDIFVGNALIDMYCKCGDV 399
S RP+E+T +L ACA+L ELG+ V Y+ + F ++L+DMY KCG++
Sbjct: 311 VGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNI 370
Query: 400 EKAQRVFREMLRKDKFTWTAMIVGLAINGHGDKSLDMFSQMLRASIIPDEVTYVGVLSAC 459
E A+ V + D +WT++I G A NG D++L F +L++ PD VT+V VLSAC
Sbjct: 371 ESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSAC 430
Query: 460 THTGMVDEGREYFADMTIQHGIEPNEAHYGCMVDLLGRAGHLNEALEVIKNMPMKPNSIV 519
TH G+V++G E+F +T +H + HY C+VDLL R+G + VI MPMKP+ +
Sbjct: 431 THAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFL 490
Query: 520 WGALLGACRVHRDAEMAEMAAKQILELDPDNEAVYVLLCNIYAACNRWDNFRELRQMILD 579
W ++LG C + + ++AE AA+++ +++P+N YV + NIYAA +W+ ++R+ + +
Sbjct: 491 WASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQE 550
Query: 580 RGIKKTPGCSMIEMNGVVHEFVAGDKSHPQTKEIYLKLDEMTSDLKFVGYMPDISEVFLD 639
G+ K PG S E+ H F+A D SHP +I L E+ +K GY+P S V D
Sbjct: 551 IGVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLRELRKKMKEEGYVPATSLVLHD 610
Query: 640 VGEEDKERAVYQHSEKLAMAFGLISSGPGVTIRIVKNLRMCVDCHRMAKLVSMVYDREVI 699
V +E KE + HSEKLA+AF ++S+ G I++ KNLR CVDCH K +S + R++
Sbjct: 611 VEDEQKEENLVYHSEKLAVAFAILSTEEGTAIKVFKNLRSCVDCHGAIKFISNITKRKIT 670
Query: 700 VRDKTRFHHFKHGSCSCKDYW 720
VRD TRFH F++G CSC DYW
Sbjct: 671 VRDSTRFHCFENGQCSCGDYW 691
Score = 169 bits (427), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 122/494 (24%), Positives = 217/494 (43%), Gaps = 72/494 (14%)
Query: 9 PPSTLTQETPLISPIETCESMHQLKQIHSQTIKLGLLTNPTVQNKLVTFCCSEKGDMKYA 68
P ST LI ++ + K++H G + + N+L+ ++ G + A
Sbjct: 84 PASTYCN---LIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMY-AKCGSLVDA 139
Query: 69 CKVFRKIPRPSVCLWNTMIKGYSRI-------------------------------DSHK 97
KVF ++P +C WN M+ GY+ + D +
Sbjct: 140 RKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPE 199
Query: 98 NGVLIYLDMLK-SDVRPDNYTFPFLLKGFTRDIAVEFGKELHCHVLKFGFDSSVFVQNAL 156
+++Y M + + RP+ +T + + GKE+H H+++ G DS + ++L
Sbjct: 200 EALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSL 259
Query: 157 ISTYCLCGEVDMARGIFDVSYKDDVVTWNAMFSGYKRVKQFDETRKLFGEMERKGVLPTS 216
+ Y CG +D AR IFD + DVV+W +M Y + ++ E LF E+ P
Sbjct: 260 MDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNE 319
Query: 217 VTIVLVLSACAKLKDLDVGKRAHRYVKECKIVPNLILENALTDMYAACGEMGFALEIFGN 276
T VL+ACA L ++GK+ H Y+ P ++L DMY CG + A +
Sbjct: 320 YTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDG 379
Query: 277 IKNKDVISWTAIVTGYINRGQVDMARQYFDQMPERDYVLWTAMIDGYLRVNRFREALTLF 336
D++SWT+++ G GQ D A +YFD + +
Sbjct: 380 CPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLK-------------------------- 413
Query: 337 REMQTSNIRPDEFTIVSILTACANLGALELG-EWVKTYIDKNKVKNDIFVGNALIDMYCK 395
S +PD T V++L+AC + G +E G E+ + +K+++ + L+D+ +
Sbjct: 414 -----SGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLAR 468
Query: 396 CGDVEKAQRVFREM-LRKDKFTWTAMIVGLAINGHGDKSLDMFSQMLRASIIPDE-VTYV 453
G E+ + V EM ++ KF W +++ G + G+ D + + ++ + I P+ VTYV
Sbjct: 469 SGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFK--IEPENPVTYV 526
Query: 454 GVLSACTHTGMVDE 467
+ + G +E
Sbjct: 527 TMANIYAAAGKWEE 540
Score = 113 bits (282), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 97/415 (23%), Positives = 176/415 (42%), Gaps = 73/415 (17%)
Query: 33 KQIHSQTIKLGLLTNPTVQNKLVTFCCSEKGDMKYACKVFRKIPRPSVCLWNTMIKGYSR 92
K+IH ++ GL ++ + + L+ + G + A +F KI V W +MI Y +
Sbjct: 238 KEIHGHIVRAGLDSDEVLWSSLMDMY-GKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFK 296
Query: 93 IDSHKNGVLIYLDMLKSDVRPDNYTFPFLLKGFTRDIAVEFGKELHCHVLKFGFDSSVFV 152
+ G ++ +++ S RP+ YTF +L E GK++H ++ + GFD F
Sbjct: 297 SSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFA 356
Query: 153 QNALISTYCLCGEVDMARGIFDVSYKDDVVTWNAMFSGYKRVKQFDETRKLFGEMERKGV 212
++L+ Y CG ++ A+ + D K D+V+W ++ G + Q DE K F + + G
Sbjct: 357 SSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGT 416
Query: 213 LPTSVTIVLVLSACAKLKDLDVGKRAHRYVKECKIVPNLILENALTDMYAACGEMGFALE 272
P VT V VLSAC +A E G LE
Sbjct: 417 KPDHVTFVNVLSACT---------------------------------HAGLVEKG--LE 441
Query: 273 IFGNIKNKDVISWTAIVTGYINRGQVDMARQYFDQMPERDYVLWTAMIDGYLRVNRFREA 332
F +I K +S T+ D+ +T ++D R RF +
Sbjct: 442 FFYSITEKHRLSHTS------------------------DH--YTCLVDLLARSGRFEQL 475
Query: 333 LTLFREMQTSNIRPDEFTIVSILTACANLGALELGEWVKTYIDKNKVKNDI-FVGNALID 391
++ EM ++P +F S+L C+ G ++L E + K + +N + +V + +
Sbjct: 476 KSVISEMP---MKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYV--TMAN 530
Query: 392 MYCKCGDVEKAQRVFREM-----LRKDKFTWTAMIVGLAINGHGDKSLDMFSQML 441
+Y G E+ ++ + M ++ +WT + + D S M++Q++
Sbjct: 531 IYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIV 585
>sp|Q9SI53|PP147_ARATH Pentatricopeptide repeat-containing protein At2g03880,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H44 PE=2
SV=1
Length = 630
Score = 434 bits (1115), Expect = e-120, Method: Compositional matrix adjust.
Identities = 229/618 (37%), Positives = 353/618 (57%), Gaps = 37/618 (5%)
Query: 104 LDMLKSD-VRPDNYTFPFLLKGFTRDIAVEFGKELHCHVLKFGFDSSVFVQNALISTYCL 162
+D L+S + D+ T+ L+K + AV G + H+ G +F+ N LI+ Y
Sbjct: 49 MDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVK 108
Query: 163 CGEVDMARGIFDVSYKDDVVTWNAMFSGYKRVKQFDETRKLFGEMERKGVLPTSVTIVLV 222
++ A +FD + +V++W M S Y + K + +L M R V P T V
Sbjct: 109 FNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSV 168
Query: 223 LSACAKLKDLDVGKRAHRYVKECKIVPNLILENALTDMYAACGEMGFALEIFGNIKNKDV 282
L +C + D+ + H + + + ++ + +AL D++A GE AL +F
Sbjct: 169 LRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVF-------- 217
Query: 283 ISWTAIVTGYINRGQVDMARQYFDQMPERDYVLWTAMIDGYLRVNRFREALTLFREMQTS 342
D+M D ++W ++I G+ + +R AL LF+ M+ +
Sbjct: 218 -----------------------DEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRA 254
Query: 343 NIRPDEFTIVSILTACANLGALELGEWVKTYIDKNKVKNDIFVGNALIDMYCKCGDVEKA 402
++ T+ S+L AC L LELG ++ ++ K D+ + NAL+DMYCKCG +E A
Sbjct: 255 GFIAEQATLTSVLRACTGLALLELG--MQAHVHIVKYDQDLILNNALVDMYCKCGSLEDA 312
Query: 403 QRVFREMLRKDKFTWTAMIVGLAINGHGDKSLDMFSQMLRASIIPDEVTYVGVLSACTHT 462
RVF +M +D TW+ MI GLA NG+ ++L +F +M + P+ +T VGVL AC+H
Sbjct: 313 LRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHA 372
Query: 463 GMVDEGREYFADMTIQHGIEPNEAHYGCMVDLLGRAGHLNEALEVIKNMPMKPNSIVWGA 522
G++++G YF M +GI+P HYGCM+DLLG+AG L++A++++ M +P+++ W
Sbjct: 373 GLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRT 432
Query: 523 LLGACRVHRDAEMAEMAAKQILELDPDNEAVYVLLCNIYAACNRWDNFRELRQMILDRGI 582
LLGACRV R+ +AE AAK+++ LDP++ Y LL NIYA +WD+ E+R + DRGI
Sbjct: 433 LLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGI 492
Query: 583 KKTPGCSMIEMNGVVHEFVAGDKSHPQTKEIYLKLDEMTSDLKFVGYMPDISEVFLDVGE 642
KK PGCS IE+N +H F+ GD SHPQ E+ KL+++ L +GY+P+ + V D+
Sbjct: 493 KKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEG 552
Query: 643 EDKERAVYQHSEKLAMAFGLISSGPGVTIRIVKNLRMCVDCHRMAKLVSMVYDREVIVRD 702
E E ++ HSEKLA+AFGL++ IRI KNLR+C DCH KL S + R +++RD
Sbjct: 553 EQMEDSLRHHSEKLALAFGLMTLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRD 612
Query: 703 KTRFHHFKHGSCSCKDYW 720
R+HHF+ G CSC DYW
Sbjct: 613 PIRYHHFQDGKCSCGDYW 630
Score = 177 bits (450), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 109/359 (30%), Positives = 183/359 (50%), Gaps = 44/359 (12%)
Query: 68 ACKVFRKIPRPSVCLWNTMIKGYSRIDSHKNGVLIYLDMLKSDVRPDNYTFPFLLKGFTR 127
A ++F ++P+ +V W TMI YS+ H+ + + + ML+ +VRP+ YT+ +L+
Sbjct: 115 AHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCN- 173
Query: 128 DIAVEFGKELHCHVLKFGFDSSVFVQNALISTYCLCGEVDMARGIFDVSYKDDVVTWNAM 187
+ + LHC ++K G +S VFV++ALI + GE + A +FD D + WN++
Sbjct: 174 --GMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSI 231
Query: 188 FSGYKRVKQFDETRKLFGEMERKGVLPTSVTIVLVLSACAKLKDLDVGKRAHRYVKECKI 247
G+ + + D +LF M+R G + T+ VL AC L L++G +AH ++ K
Sbjct: 232 IGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHI--VKY 289
Query: 248 VPNLILENALTDMYAACGEMGFALEIFGNIKNKDVISWTAIVTGYINRGQVDMARQYFDQ 307
+LIL NAL DMY CG + AL +F +K +DVI+W+ +++G +A+ + Q
Sbjct: 290 DQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISG--------LAQNGYSQ 341
Query: 308 MPERDYVLWTAMIDGYLRVNRFREALTLFREMQTSNIRPDEFTIVSILTACANLGALELG 367
EAL LF M++S +P+ TIV +L AC++ G LE G
Sbjct: 342 -----------------------EALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDG 378
Query: 368 EW----VKTYIDKNKVKNDIFVGNALIDMYCKCGDVEKAQRVFREM-LRKDKFTWTAMI 421
+ +K + V+ +ID+ K G ++ A ++ EM D TW ++
Sbjct: 379 WYYFRSMKKLYGIDPVREHY---GCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLL 434
Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 134/271 (49%), Gaps = 5/271 (1%)
Query: 21 SPIETCESMHQLKQIHSQTIKLGLLTNPTVQNKLVTFCCSEKGDMKYACKVFRKIPRPSV 80
S + +C M ++ +H IK GL ++ V++ L+ ++ G+ + A VF ++
Sbjct: 167 SVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVF-AKLGEPEDALSVFDEMVTGDA 225
Query: 81 CLWNTMIKGYSRIDSHKNGVLIYLDMLKSDVRPDNYTFPFLLKGFTRDIAVEFGKELHCH 140
+WN++I G+++ + ++ M ++ + T +L+ T +E G + H H
Sbjct: 226 IVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVH 285
Query: 141 VLKFGFDSSVFVQNALISTYCLCGEVDMARGIFDVSYKDDVVTWNAMFSGYKRVKQFDET 200
++K+ D + + NAL+ YC CG ++ A +F+ + DV+TW+ M SG + E
Sbjct: 286 IVKY--DQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEA 343
Query: 201 RKLFGEMERKGVLPTSVTIVLVLSACAKLKDLDVGKRAHRYVKEC-KIVPNLILENALTD 259
KLF M+ G P +TIV VL AC+ L+ G R +K+ I P + D
Sbjct: 344 LKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMID 403
Query: 260 MYAACGEMGFALEIFGNIK-NKDVISWTAIV 289
+ G++ A+++ ++ D ++W ++
Sbjct: 404 LLGKAGKLDDAVKLLNEMECEPDAVTWRTLL 434
Score = 73.2 bits (178), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 95/195 (48%), Gaps = 5/195 (2%)
Query: 332 ALTLFREMQTSNIRPDEFTIVSILTACANLGALELGEWVKTYIDKNKVKNDIFVGNALID 391
A+ +Q+ + D T ++ C + A+ G + ++ N + +F+ N LI+
Sbjct: 45 AMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLIN 104
Query: 392 MYCKCGDVEKAQRVFREMLRKDKFTWTAMIVGLAINGHGDKSLDMFSQMLRASIIPDEVT 451
MY K + A ++F +M +++ +WT MI + K+L++ MLR ++ P+ T
Sbjct: 105 MYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYT 164
Query: 452 YVGVLSACTHTGMVDEGREYFADMTIQHGIEPNEAHYGCMVDLLGRAGHLNEALEVIKNM 511
Y VL +C GM D + I+ G+E + ++D+ + G +AL V M
Sbjct: 165 YSSVLRSC--NGMSDVRMLHCG--IIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEM 220
Query: 512 PMKPNSIVWGALLGA 526
+ ++IVW +++G
Sbjct: 221 -VTGDAIVWNSIIGG 234
>sp|O49619|PP350_ARATH Pentatricopeptide repeat-containing protein At4g35130,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H27 PE=3
SV=1
Length = 804
Score = 432 bits (1110), Expect = e-120, Method: Compositional matrix adjust.
Identities = 235/713 (32%), Positives = 390/713 (54%), Gaps = 55/713 (7%)
Query: 19 LISPIETCESMHQLKQIHSQTIKLGLLTNPTVQNKLVTFCCSEKGDMKYAC-----KVFR 73
+I + S+ + K+IH+ IKLG +++ V N L++ MK C KVF
Sbjct: 136 VIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLY------MKLGCAWDAEKVFE 189
Query: 74 KIPRPSVCLWNTMIKGYSRIDSHKNGVLIYLDMLKSDVRPDNYTFPFLLKGFTRDIAVEF 133
++P + WN+MI GY + + ++++ +MLK +PD ++ L + + +
Sbjct: 190 EMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKM 249
Query: 134 GKELHCHVLKFGFDSS-VFVQNALISTYCLCGEVDMARGIFDVSYKDDVVTWNAMFSGYK 192
GKE+HCH ++ ++ V V +++ Y GEV A IF+ + ++V WN M Y
Sbjct: 250 GKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYA 309
Query: 193 RVKQFDETRKLFGEM-ERKGVLPTSVTIVLVLSACAKLKDLDVGKRAHRYVKECKIVPNL 251
R + + F +M E+ G+ P +T + +L A A L+ G+ H Y +P++
Sbjct: 310 RNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILE----GRTIHGYAMRRGFLPHM 365
Query: 252 ILENALTDMYAACGEMGFALEIFGNIKNKDVISWTAIVTGYINRGQVDMARQYFDQMPER 311
+LE AL DMY CG++ K+ +VI FD+M E+
Sbjct: 366 VLETALIDMYGECGQL----------KSAEVI---------------------FDRMAEK 394
Query: 312 DYVLWTAMIDGYLRVNRFREALTLFREMQTSNIRPDEFTIVSILTACANLGALELGEWVK 371
+ + W ++I Y++ + AL LF+E+ S++ PD TI SIL A A +L G +
Sbjct: 395 NVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIH 454
Query: 372 TYIDKNKVKNDIFVGNALIDMYCKCGDVEKAQRVFREMLRKDKFTWTAMIVGLAINGHGD 431
YI K++ ++ + N+L+ MY CGD+E A++ F +L KD +W ++I+ A++G G
Sbjct: 455 AYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGR 514
Query: 432 KSLDMFSQMLRASIIPDEVTYVGVLSACTHTGMVDEGREYFADMTIQHGIEPNEAHYGCM 491
S+ +FS+M+ + + P++ T+ +L+AC+ +GMVDEG EYF M ++GI+P HYGCM
Sbjct: 515 ISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCM 574
Query: 492 VDLLGRAGHLNEALEVIKNMPMKPNSIVWGALLGACRVHRDAEMAEMAAKQILELDPDNE 551
+DL+GR G+ + A ++ MP P + +WG+LL A R H+D +AE AA+QI +++ DN
Sbjct: 575 LDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNT 634
Query: 552 AVYVLLCNIYAACNRWDNFRELRQMILDRGIKKTPGCSMIEMNGVVHEFVAGDKSHPQTK 611
YVLL N+YA RW++ ++ ++ +GI +T S +E G H F GD+SH T
Sbjct: 635 GCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVEAKGKSHVFTNGDRSHVATN 694
Query: 612 EIYLKLDEMTSDLKFVG----YMPDISEVFLDVGEEDKERAVYQHSEKLAMAFGLISSGP 667
+IY LD ++ + VG Y+ +S + + + + + +HS +LA FGLIS+
Sbjct: 695 KIYEVLDVVS---RMVGEEDIYVHCVSRLRPETLVKSRSNSPRRHSVRLATCFGLISTET 751
Query: 668 GVTIRIVKNLRMCVDCHRMAKLVSMVYDREVIVRDKTRFHHFKHGSCSCKDYW 720
G + + N R+C CH + S + RE++V D FHHF +G CSC +YW
Sbjct: 752 GRRVTVRNNTRICRKCHEFLEKASRLTRREIVVGDSKIFHHFSNGRCSCGNYW 804
Score = 114 bits (285), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 121/241 (50%), Gaps = 3/241 (1%)
Query: 286 TAIVTGYINRGQVDMARQYFDQMPERDYVLWTAMIDGYLRVNRFREALTLFREMQTSNIR 345
T + G+ + ++ A Q FD+M + D LW MI G+ + EA+ + M + ++
Sbjct: 68 TRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVK 127
Query: 346 PDEFTIVSILTACANLGALELGEWVKTYIDKNKVKNDIFVGNALIDMYCKCGDVEKAQRV 405
D FT ++ + A + +LE G+ + + K +D++V N+LI +Y K G A++V
Sbjct: 128 ADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKV 187
Query: 406 FREMLRKDKFTWTAMIVGLAINGHGDKSLDMFSQMLRASIIPDEVTYVGVLSACTHTGMV 465
F EM +D +W +MI G G G SL +F +ML+ PD + + L AC+H
Sbjct: 188 FEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSP 247
Query: 466 DEGREYFADMTIQHGIEPNEAH-YGCMVDLLGRAGHLNEALEVIKNMPMKPNSIVWGALL 524
G+E ++ IE + ++D+ + G ++ A E I N ++ N + W ++
Sbjct: 248 KMGKEIHCH-AVRSRIETGDVMVMTSILDMYSKYGEVSYA-ERIFNGMIQRNIVAWNVMI 305
Query: 525 G 525
G
Sbjct: 306 G 306
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 432 bits (1110), Expect = e-120, Method: Compositional matrix adjust.
Identities = 237/670 (35%), Positives = 360/670 (53%), Gaps = 44/670 (6%)
Query: 62 KGDMKY--ACKVFRKIPRPSVCLWNTMIKGYSRIDSHKNGVLIYLDMLKSDVRPDNYTFP 119
KG+ + A KVF K+ +V W MI ++ + + +LDM+ S D +T
Sbjct: 214 KGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLS 273
Query: 120 FLLKGFTRDIAVEFGKELHCHVLKFGFDSSVFVQNALISTYCLC---GEVDMARGIFDVS 176
+ + GK+LH ++ G V + +L+ Y C G VD R +FD
Sbjct: 274 SVFSACAELENLSLGKQLHSWAIRSGLVDDV--ECSLVDMYAKCSADGSVDDCRKVFDRM 331
Query: 177 YKDDVVTWNAMFSGY-KRVKQFDETRKLFGEMERKG-VLPTSVTIVLVLSACAKLKDLDV 234
V++W A+ +GY K E LF EM +G V P T AC L D V
Sbjct: 332 EDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRV 391
Query: 235 GKRAHRYVKECKIVPNLILENALTDMYAACGEMGFALEIFGNIKNKDVISWTAIVTGYIN 294
GK+ +L A A+ + ++++ ++
Sbjct: 392 GKQ--------------VLGQAFKRGLASNSSVA-----------------NSVISMFVK 420
Query: 295 RGQVDMARQYFDQMPERDYVLWTAMIDGYLRVNRFREALTLFREMQTSNIRPDEFTIVSI 354
+++ A++ F+ + E++ V + +DG R F +A L E+ + FT S+
Sbjct: 421 SDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASL 480
Query: 355 LTACANLGALELGEWVKTYIDKNKVKNDIFVGNALIDMYCKCGDVEKAQRVFREMLRKDK 414
L+ AN+G++ GE + + + K + + V NALI MY KCG ++ A RVF M ++
Sbjct: 481 LSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNV 540
Query: 415 FTWTAMIVGLAINGHGDKSLDMFSQMLRASIIPDEVTYVGVLSACTHTGMVDEGREYFAD 474
+WT+MI G A +G + L+ F+QM+ + P+EVTYV +LSAC+H G+V EG +F
Sbjct: 541 ISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNS 600
Query: 475 MTIQHGIEPNEAHYGCMVDLLGRAGHLNEALEVIKNMPMKPNSIVWGALLGACRVHRDAE 534
M H I+P HY CMVDLL RAG L +A E I MP + + +VW LGACRVH + E
Sbjct: 601 MYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTE 660
Query: 535 MAEMAAKQILELDPDNEAVYVLLCNIYAACNRWDNFRELRQMILDRGIKKTPGCSMIEMN 594
+ ++AA++ILELDP+ A Y+ L NIYA +W+ E+R+ + +R + K GCS IE+
Sbjct: 661 LGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVG 720
Query: 595 GVVHEFVAGDKSHPQTKEIYLKLDEMTSDLKFVGYMPD----ISEVFLDVGEEDKERAVY 650
+H+F GD +HP +IY +LD + +++K GY+PD + ++ + E +KER +Y
Sbjct: 721 DKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCGYVPDTDLVLHKLEEENDEAEKERLLY 780
Query: 651 QHSEKLAMAFGLISSGPGVTIRIVKNLRMCVDCHRMAKLVSMVYDREVIVRDKTRFHHFK 710
QHSEK+A+AFGLIS+ +R+ KNLR+C DCH K +S V RE+++RD RFHHFK
Sbjct: 781 QHSEKIAVAFGLISTSKSRPVRVFKNLRVCGDCHNAMKYISTVSGREIVLRDLNRFHHFK 840
Query: 711 HGSCSCKDYW 720
G CSC DYW
Sbjct: 841 DGKCSCNDYW 850
Score = 141 bits (356), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 113/442 (25%), Positives = 205/442 (46%), Gaps = 46/442 (10%)
Query: 99 GVLIYLDMLKSD-VRP-DNYTFPFLLKGFTRDIAVEFGKELHCHVLKFGFDSSVFVQNAL 156
G + LD++ D +RP D+ TF LLK R GK +H +++F + + N+L
Sbjct: 44 GAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSL 103
Query: 157 ISTYCLCGEVDMARGIFDVSY---KDDVVTWNAMFSGYKRVKQFDETRKLFGEMERKGVL 213
IS Y G+ A +F+ K DVV+W+AM + Y + + K+F E G++
Sbjct: 104 ISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLV 163
Query: 214 PTSVTIVLVLSACAKLKDLDVGKRAHRYV-KECKIVPNLILENALTDMYAACGEMGFALE 272
P V+ AC+ + VG+ ++ K ++ + +L DM+ GE F
Sbjct: 164 PNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVK-GENSF--- 219
Query: 273 IFGNIKNKDVISWTAIVTGYINRGQVDMARQYFDQMPERDYVLWTAMIDGYLRVNRFREA 332
+ A + FD+M E + V WT MI +++ REA
Sbjct: 220 --------------------------ENAYKVFDKMSELNVVTWTLMITRCMQMGFPREA 253
Query: 333 LTLFREMQTSNIRPDEFTIVSILTACANLGALELGEWVKTYIDKNKVKNDIFVGNALIDM 392
+ F +M S D+FT+ S+ +ACA L L LG+ + ++ ++ + +D V +L+DM
Sbjct: 254 IRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDM 311
Query: 393 YCKC---GDVEKAQRVFREMLRKDKFTWTAMIVGLAINGH-GDKSLDMFSQML-RASIIP 447
Y KC G V+ ++VF M +WTA+I G N + +++++FS+M+ + + P
Sbjct: 312 YAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEP 371
Query: 448 DEVTYVGVLSACTHTGMVDEGREYFADMTIQHGIEPNEAHYGCMVDLLGRAGHLNEALEV 507
+ T+ AC + G++ + G+ N + ++ + ++ + +A
Sbjct: 372 NHFTFSSAFKACGNLSDPRVGKQVLGQ-AFKRGLASNSSVANSVISMFVKSDRMEDAQRA 430
Query: 508 IKNMPMKPNSIVWGALL-GACR 528
+++ K N + + L G CR
Sbjct: 431 FESLSEK-NLVSYNTFLDGTCR 451
Score = 129 bits (323), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 101/413 (24%), Positives = 186/413 (45%), Gaps = 44/413 (10%)
Query: 19 LISPIETCESMHQL---KQIHSQTIKLGLLTNPTVQNKLVTFC--CSEKGDMKYACKVFR 73
L S C + L KQ+HS I+ GL+ + V+ LV CS G + KVF
Sbjct: 272 LSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFD 329
Query: 74 KIPRPSVCLWNTMIKGYSR-IDSHKNGVLIYLDML-KSDVRPDNYTFPFLLKGFTRDIAV 131
++ SV W +I GY + + + ++ +M+ + V P+++TF K
Sbjct: 330 RMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDP 389
Query: 132 EFGKELHCHVLKFGFDSSVFVQNALISTYCLCGEVDMARGIFDVSYKDDVVTWNAMFSGY 191
GK++ K G S+ V N++IS + ++ A+ F+ + ++V++N G
Sbjct: 390 RVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGT 449
Query: 192 KRVKQFDETRKLFGEMERKGVLPTSVTIVLVLSACAKLKDLDVGKRAHRYVKECKIVPNL 251
R F++ KL E+ + + ++ T +LS A + + G++ H V + + N
Sbjct: 450 CRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQ 509
Query: 252 ILENALTDMYAACGEMGFALEIFGNIKNKDVISWTAIVTGYINRGQVDMARQYFDQMPER 311
+ NAL MY+ CG + A +F ++N++VISWT+++TG+ G + F+QM E
Sbjct: 510 PVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEE 569
Query: 312 DYVLWTAMIDGYLRVNRFREALTLFREMQTSNIRPDEFTIVSILTACANLGALELGEW-- 369
++P+E T V+IL+AC+++G + G W
Sbjct: 570 -------------------------------GVKPNEVTYVAILSACSHVGLVSEG-WRH 597
Query: 370 VKTYIDKNKVKNDIFVGNALIDMYCKCGDVEKAQRVFREM-LRKDKFTWTAMI 421
+ + +K+K + ++D+ C+ G + A M + D W +
Sbjct: 598 FNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFL 650
Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 146/327 (44%), Gaps = 22/327 (6%)
Query: 319 MIDGYLRVNRFREALTLFREMQTSNIRP-DEFTIVSILTACANLGALELGEWVKTYIDKN 377
+I +L R A++ M IRP D T S+L +C LG+ V + +
Sbjct: 32 LILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEF 91
Query: 378 KVKNDIFVGNALIDMYCKCGDVEKAQRVFREMLR---KDKFTWTAMIVGLAINGHGDKSL 434
++ D + N+LI +Y K GD KA+ VF M R +D +W+AM+ NG ++
Sbjct: 92 DIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAI 151
Query: 435 DMFSQMLRASIIPDEVTYVGVLSACTHTGMVDEGREYFADMTIQHGIEPNEAHYGC-MVD 493
+F + L ++P++ Y V+ AC+++ V GR ++ G ++ GC ++D
Sbjct: 152 KVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLG-FLMKTGHFESDVCVGCSLID 210
Query: 494 LLGRA-GHLNEALEVIKNMPMKPNSIVWGALLGACRVHRDAEMAEMAAKQILELDPDN-E 551
+ + A +V M + N + W ++ C A + L++ E
Sbjct: 211 MFVKGENSFENAYKVFDKMS-ELNVVTWTLMITRC---MQMGFPREAIRFFLDMVLSGFE 266
Query: 552 AVYVLLCNIYAACNRWDNF---RELRQMILDRGIKKTPGCSMIEMNGVVHEFVAGDKSHP 608
+ L ++++AC +N ++L + G+ CS+++M + + D S
Sbjct: 267 SDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVECSLVDM----YAKCSADGSVD 322
Query: 609 QTKEIYLKLDE---MTSDLKFVGYMPD 632
++++ ++++ M+ GYM +
Sbjct: 323 DCRKVFDRMEDHSVMSWTALITGYMKN 349
>sp|Q9LIC3|PP227_ARATH Putative pentatricopeptide repeat-containing protein At3g13770,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H85 PE=3
SV=1
Length = 628
Score = 430 bits (1106), Expect = e-119, Method: Compositional matrix adjust.
Identities = 218/593 (36%), Positives = 339/593 (57%), Gaps = 33/593 (5%)
Query: 130 AVEFGKELHCHVLKFGFDSSVFVQNALISTYCLCGEVDMARGIFDVSYKDDVVTWNAMFS 189
A+ G+ +H H++K + + +++ L+ Y C ++ AR + D + +VV+W AM S
Sbjct: 67 ALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMIS 126
Query: 190 GYKRVKQFDETRKLFGEMERKGVLPTSVTIVLVLSACAKLKDLDVGKRAHRYVKECKIVP 249
Y + E +F EM R P T VL++C + L +GK+ H + +
Sbjct: 127 RYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDS 186
Query: 250 NLILENALTDMYAACGEMGFALEIFGNIKNKDVISWTAIVTGYINRGQVDMARQYFDQMP 309
++ + ++L DMYA G Q+ AR+ F+ +P
Sbjct: 187 HIFVGSSLLDMYAKAG-------------------------------QIKEAREIFECLP 215
Query: 310 ERDYVLWTAMIDGYLRVNRFREALTLFREMQTSNIRPDEFTIVSILTACANLGALELGEW 369
ERD V TA+I GY ++ EAL +F + + + P+ T S+LTA + L L+ G+
Sbjct: 216 ERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQ 275
Query: 370 VKTYIDKNKVKNDIFVGNALIDMYCKCGDVEKAQRVFREMLRKDKFTWTAMIVGLAINGH 429
++ + ++ + N+LIDMY KCG++ A+R+F M + +W AM+VG + +G
Sbjct: 276 AHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGL 335
Query: 430 GDKSLDMFSQML-RASIIPDEVTYVGVLSACTHTGMVDEGREYFADMTI-QHGIEPNEAH 487
G + L++F M + PD VT + VLS C+H M D G F M ++G +P H
Sbjct: 336 GREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEH 395
Query: 488 YGCMVDLLGRAGHLNEALEVIKNMPMKPNSIVWGALLGACRVHRDAEMAEMAAKQILELD 547
YGC+VD+LGRAG ++EA E IK MP KP + V G+LLGACRVH ++ E ++++E++
Sbjct: 396 YGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIE 455
Query: 548 PDNEAVYVLLCNIYAACNRWDNFRELRQMILDRGIKKTPGCSMIEMNGVVHEFVAGDKSH 607
P+N YV+L N+YA+ RW + +R M++ + + K PG S I+ +H F A D++H
Sbjct: 456 PENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTH 515
Query: 608 PQTKEIYLKLDEMTSDLKFVGYMPDISEVFLDVGEEDKERAVYQHSEKLAMAFGLISSGP 667
P+ +E+ K+ E++ +K GY+PD+S V DV EE KE+ + HSEKLA+ FGLI++G
Sbjct: 516 PRREEVLAKMKEISIKMKQAGYVPDLSCVLYDVDEEQKEKMLLGHSEKLALTFGLIATGE 575
Query: 668 GVTIRIVKNLRMCVDCHRMAKLVSMVYDREVIVRDKTRFHHFKHGSCSCKDYW 720
G+ IR+ KNLR+CVDCH AK+ S V++REV +RDK RFH G CSC DYW
Sbjct: 576 GIPIRVFKNLRICVDCHNFAKIFSKVFEREVSLRDKNRFHQIVDGICSCGDYW 628
Score = 162 bits (410), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 93/330 (28%), Positives = 171/330 (51%), Gaps = 35/330 (10%)
Query: 33 KQIHSQTIKLGLLTNPTVQNKLVTFCCSEKGD-MKYACKVFRKIPRPSVCLWNTMIKGYS 91
+++H+ IK L ++ +L+ F K D ++ A KV ++P +V W MI YS
Sbjct: 72 QRVHAHMIKTRYLPATYLRTRLLIF--YGKCDCLEDARKVLDEMPEKNVVSWTAMISRYS 129
Query: 92 RIDSHKNGVLIYLDMLKSDVRPDNYTFPFLLKGFTRDIAVEFGKELHCHVLKFGFDSSVF 151
+ + ++ +M++SD +P+ +TF +L R + GK++H ++K+ +DS +F
Sbjct: 130 QTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIF 189
Query: 152 VQNALISTYCLCGEVDMARGIFDVSYKDDVVTWNAMFSGYKRVKQFDETRKLFGEMERKG 211
V ++L+ Y G++ AR IF+ + DVV+ A+ +GY ++ +E ++F + +G
Sbjct: 190 VGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEG 249
Query: 212 VLPTSVTIVLVLSACAKLKDLDVGKRAHRYVKECKIVPNLILENALTDMYAACGEMGFAL 271
+ P VT +L+A + L LD GK+AH +V ++ +L+N+L DMY+ CG + +A
Sbjct: 250 MSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYAR 309
Query: 272 EIFGNIKNKDVISWTAIVTGYINRGQVDMARQYFDQMPERDYVLWTAMIDGYLRVNRFRE 331
+F N+ + ISW A++ GY G RE
Sbjct: 310 RLFDNMPERTAISWNAMLVGYSKHGL-------------------------------GRE 338
Query: 332 ALTLFREMQ-TSNIRPDEFTIVSILTACAN 360
L LFR M+ ++PD T++++L+ C++
Sbjct: 339 VLELFRLMRDEKRVKPDAVTLLAVLSGCSH 368
Score = 136 bits (343), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 151/303 (49%), Gaps = 33/303 (10%)
Query: 222 VLSACAKLKDLDVGKRAHRYVKECKIVPNLILENALTDMYAACGEMGFALEIFGNIKNKD 281
+L+AC + L G+R H ++ + + +P L L Y C + A ++ + K+
Sbjct: 58 LLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKN 117
Query: 282 VISWTAIVTGYINRGQVDMARQYFDQMPERDYVLWTAMIDGYLRVNRFREALTLFREMQT 341
V+SWTA+++ Y G EALT+F EM
Sbjct: 118 VVSWTAMISRYSQTGHSS-------------------------------EALTVFAEMMR 146
Query: 342 SNIRPDEFTIVSILTACANLGALELGEWVKTYIDKNKVKNDIFVGNALIDMYCKCGDVEK 401
S+ +P+EFT ++LT+C L LG+ + I K + IFVG++L+DMY K G +++
Sbjct: 147 SDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKE 206
Query: 402 AQRVFREMLRKDKFTWTAMIVGLAINGHGDKSLDMFSQMLRASIIPDEVTYVGVLSACTH 461
A+ +F + +D + TA+I G A G +++L+MF ++ + P+ VTY +L+A +
Sbjct: 207 AREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSG 266
Query: 462 TGMVDEGREYFADMTIQHGIEPNEAHYGCMVDLLGRAGHLNEALEVIKNMPMKPNSIVWG 521
++D G++ + ++ + ++D+ + G+L+ A + NMP + +I W
Sbjct: 267 LALLDHGKQAHCHV-LRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPER-TAISWN 324
Query: 522 ALL 524
A+L
Sbjct: 325 AML 327
Score = 96.3 bits (238), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 110/227 (48%), Gaps = 3/227 (1%)
Query: 10 PSTLTQETPLISPIETCESMHQLKQIHSQTIKLGLLTNPTVQNKLVTFCCSEKGDMKYAC 69
P+ T T L S I + KQIH +K ++ V + L+ ++ G +K A
Sbjct: 151 PNEFTFATVLTSCIRA-SGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMY-AKAGQIKEAR 208
Query: 70 KVFRKIPRPSVCLWNTMIKGYSRIDSHKNGVLIYLDMLKSDVRPDNYTFPFLLKGFTRDI 129
++F +P V +I GY+++ + + ++ + + P+ T+ LL +
Sbjct: 209 EIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLA 268
Query: 130 AVEFGKELHCHVLKFGFDSSVFVQNALISTYCLCGEVDMARGIFDVSYKDDVVTWNAMFS 189
++ GK+ HCHVL+ +QN+LI Y CG + AR +FD + ++WNAM
Sbjct: 269 LLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLV 328
Query: 190 GYKRVKQFDETRKLFGEM-ERKGVLPTSVTIVLVLSACAKLKDLDVG 235
GY + E +LF M + K V P +VT++ VLS C+ + D G
Sbjct: 329 GYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTG 375
Score = 84.0 bits (206), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 125/277 (45%), Gaps = 6/277 (2%)
Query: 305 FDQMPERDYVLWTAMIDGYLRVN-RFREALTLFREMQTSNIRPDEFTIVSILTACANLGA 363
F P +YVL T + L N R +EAL EM ++L AC + A
Sbjct: 12 FSSSPT-NYVLQTILPISQLCSNGRLQEALL---EMAMLGPEMGFHGYDALLNACLDKRA 67
Query: 364 LELGEWVKTYIDKNKVKNDIFVGNALIDMYCKCGDVEKAQRVFREMLRKDKFTWTAMIVG 423
L G+ V ++ K + ++ L+ Y KC +E A++V EM K+ +WTAMI
Sbjct: 68 LRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISR 127
Query: 424 LAINGHGDKSLDMFSQMLRASIIPDEVTYVGVLSACTHTGMVDEGREYFADMTIQHGIEP 483
+ GH ++L +F++M+R+ P+E T+ VL++C + G++ + ++ +
Sbjct: 128 YSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHG-LIVKWNYDS 186
Query: 484 NEAHYGCMVDLLGRAGHLNEALEVIKNMPMKPNSIVWGALLGACRVHRDAEMAEMAAKQI 543
+ ++D+ +AG + EA E+ + +P + + G ++ D E EM +
Sbjct: 187 HIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLH 246
Query: 544 LELDPDNEAVYVLLCNIYAACNRWDNFRELRQMILDR 580
E N Y L + D+ ++ +L R
Sbjct: 247 SEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRR 283
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 429 bits (1104), Expect = e-119, Method: Compositional matrix adjust.
Identities = 241/708 (34%), Positives = 385/708 (54%), Gaps = 38/708 (5%)
Query: 19 LISPIETCESMHQL---KQIHSQTIKLGLLTNPTVQNKLVTFCCSEKGDMKYACKVFRKI 75
L++ + C ++ K +H +KL L + N L+ S+ G + A +F+
Sbjct: 295 LVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMY-SKCGCITNAQMIFKMN 353
Query: 76 PRPSVCLWNTMIKGYS-RIDSHKN-GVLIYLDMLKSDVRPDNYTFPFLLKGFTRDIAVEF 133
+V WNTM+ G+S D+H VL + DV+ D T + + +
Sbjct: 354 NNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPS 413
Query: 134 GKELHCHVLKFGFDSSVFVQNALISTYCLCGEVDMARGIFDVSYKDDVVTWNAMFSGYKR 193
KELHC+ LK F + V NA +++Y CG + A+ +F V +WNA+ G+ +
Sbjct: 414 LKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQ 473
Query: 194 VKQFDETRKLFGEMERKGVLPTSVTIVLVLSACAKLKDLDVGKRAHRYVKECKIVPNLIL 253
+ +M+ G+LP S T+ +LSAC+KLK L +GK H
Sbjct: 474 SNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVH-------------- 519
Query: 254 ENALTDMYAACGEMGFALEIFGNIKNKDVISWTAIVTGYINRGQVDMARQYFDQMPERDY 313
GF I N +D+ + ++++ YI+ G++ + FD M ++
Sbjct: 520 --------------GF---IIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSL 562
Query: 314 VLWTAMIDGYLRVNRFREALTLFREMQTSNIRPDEFTIVSILTACANLGALELGEWVKTY 373
V W +I GYL+ AL +FR+M I+ +++ + AC+ L +L LG Y
Sbjct: 563 VSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAY 622
Query: 374 IDKNKVKNDIFVGNALIDMYCKCGDVEKAQRVFREMLRKDKFTWTAMIVGLAINGHGDKS 433
K+ +++D F+ +LIDMY K G + ++ +VF + K +W AMI+G I+G ++
Sbjct: 623 ALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEA 682
Query: 434 LDMFSQMLRASIIPDEVTYVGVLSACTHTGMVDEGREYFADMTIQHGIEPNEAHYGCMVD 493
+ +F +M R PD++T++GVL+AC H+G++ EG Y M G++PN HY C++D
Sbjct: 683 IKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVID 742
Query: 494 LLGRAGHLNEALEVI-KNMPMKPNSIVWGALLGACRVHRDAEMAEMAAKQILELDPDNEA 552
+LGRAG L++AL V+ + M + + +W +LL +CR+H++ EM E A ++ EL+P+
Sbjct: 743 MLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPE 802
Query: 553 VYVLLCNIYAACNRWDNFRELRQMILDRGIKKTPGCSMIEMNGVVHEFVAGDKSHPQTKE 612
YVLL N+YA +W++ R++RQ + + ++K GCS IE+N V FV G++ +E
Sbjct: 803 NYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEE 862
Query: 613 IYLKLDEMTSDLKFVGYMPDISEVFLDVGEEDKERAVYQHSEKLAMAFGLISSGPGVTIR 672
I + + +GY PD V D+ EE+K + HSEKLA+ +GLI + G TIR
Sbjct: 863 IKSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIR 922
Query: 673 IVKNLRMCVDCHRMAKLVSMVYDREVIVRDKTRFHHFKHGSCSCKDYW 720
+ KNLR+CVDCH AKL+S V +RE++VRD RFHHFK+G CSC DYW
Sbjct: 923 VYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGVCSCGDYW 970
Score = 191 bits (484), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 152/580 (26%), Positives = 266/580 (45%), Gaps = 61/580 (10%)
Query: 23 IETCESMHQLK---QIHSQTIKLGLLTNPTVQNKLVTFCCSEKGDMKYACKVFRKIPRPS 79
I+ C M + +H +K GL+ + V N LV+F + G + A ++F +P +
Sbjct: 194 IKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTH-GFVTDALQLFDIMPERN 252
Query: 80 VCLWNTMIKGYSRIDSHKNGVLIYLDMLKSD----VRPDNYTFPFLLKGFTRDIAVEFGK 135
+ WN+MI+ +S + L+ +M++ + PD T +L R+ + GK
Sbjct: 253 LVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGK 312
Query: 136 ELHCHVLKFGFDSSVFVQNALISTYCLCGEVDMARGIFDVSYKDDVVTWNAMFSGYKRVK 195
+H +K D + + NAL+ Y CG + A+ IF ++ +VV+WN M G+
Sbjct: 313 GVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEG 372
Query: 196 QFDETRKLFGEMERKG--VLPTSVTIVLVLSACAKLKDLDVGKRAHRYVKECKIVPNLIL 253
T + +M G V VTI+ + C L K H Y + + V N ++
Sbjct: 373 DTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELV 432
Query: 254 ENALTDMYAACGEMGFALEIFGNIKNKDVISWTAIVTGYINRGQVDMARQYFDQMPERDY 313
NA YA CG + +A +F I++K V SW
Sbjct: 433 ANAFVASYAKCGSLSYAQRVFHGIRSKTVNSW---------------------------- 464
Query: 314 VLWTAMIDGYLRVNRFREALTLFREMQTSNIRPDEFTIVSILTACANLGALELGEWVKTY 373
A+I G+ + N R +L +M+ S + PD FT+ S+L+AC+ L +L LG+ V +
Sbjct: 465 ---NALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGF 521
Query: 374 IDKNKVKNDIFVGNALIDMYCKCGDVEKAQRVFREMLRKDKFTWTAMIVGLAINGHGDKS 433
I +N ++ D+FV +++ +Y CG++ Q +F M K +W +I G NG D++
Sbjct: 522 IIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRA 581
Query: 434 LDMFSQMLRASIIPDEVTYVGVLSACTHTGMVDEGREYFADMTIQHGIEPNEAHYGC-MV 492
L +F QM+ I ++ + V AC+ + GRE A ++H +E ++A C ++
Sbjct: 582 LGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHA-YALKHLLE-DDAFIACSLI 639
Query: 493 DLLGRAGHLNEALEVIKNMPMKPNSIVWGALLGACRVHRDAEMAEMAAKQILEL-----D 547
D+ + G + ++ +V + K + W A++ +H +A+ A K E+ +
Sbjct: 640 DMYAKNGSITQSSKVFNGLKEKSTA-SWNAMIMGYGIH---GLAKEAIKLFEEMQRTGHN 695
Query: 548 PDNEAVYVLLCNIYAACNR----WDNFRELRQMILDRGIK 583
PD+ + + ACN + R L QM G+K
Sbjct: 696 PDD----LTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLK 731
Score = 172 bits (436), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 131/465 (28%), Positives = 218/465 (46%), Gaps = 44/465 (9%)
Query: 13 LTQETPLISPIETCESMHQLKQIHSQTIKLGLLTNPTVQNKLVTF--CCSEKGDMKYACK 70
L Q + IE +HQL ++ L + + +++T C D ++
Sbjct: 90 LLQASGKRKDIEMGRKIHQLVSGSTR-----LRNDDVLCTRIITMYAMCGSPDDSRF--- 141
Query: 71 VFRKIPRPSVCLWNTMIKGYSRIDSHKNGVLIYLDMLKS-DVRPDNYTFPFLLKGFTRDI 129
VF + ++ WN +I YSR + + + +++M+ + D+ PD++T+P ++K
Sbjct: 142 VFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMS 201
Query: 130 AVEFGKELHCHVLKFGFDSSVFVQNALISTYCLCGEVDMARGIFDVSYKDDVVTWNAMFS 189
V G +H V+K G VFV NAL+S Y G V A +FD+ + ++V+WN+M
Sbjct: 202 DVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIR 261
Query: 190 GYKRVKQFDETRKLFGE-MERKG---VLPTSVTIVLVLSACAKLKDLDVGKRAHRYVKEC 245
+ +E+ L GE ME G +P T+V VL CA+ +++ +GK H + +
Sbjct: 262 VFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKL 321
Query: 246 KIVPNLILENALTDMYAACGEMGFALEIFGNIKNKDVISWTAIVTGYINRGQVDMARQYF 305
++ L+L NAL DMY+ CG + A IF NK+V+SW +V G+ G F
Sbjct: 322 RLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGD---THGTF 378
Query: 306 DQMPERDYVLWTAMIDGYLRVNRFREALTLFREMQTSNIRPDEFTIVSILTACANLGALE 365
D + + M+ G +++ DE TI++ + C + L
Sbjct: 379 DVLRQ--------MLAG------------------GEDVKADEVTILNAVPVCFHESFLP 412
Query: 366 LGEWVKTYIDKNKVKNDIFVGNALIDMYCKCGDVEKAQRVFREMLRKDKFTWTAMIVGLA 425
+ + Y K + + V NA + Y KCG + AQRVF + K +W A+I G A
Sbjct: 413 SLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHA 472
Query: 426 INGHGDKSLDMFSQMLRASIIPDEVTYVGVLSACTHTGMVDEGRE 470
+ SLD QM + ++PD T +LSAC+ + G+E
Sbjct: 473 QSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKE 517
Score = 152 bits (384), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 119/464 (25%), Positives = 207/464 (44%), Gaps = 51/464 (10%)
Query: 120 FLLKGFTRDIAVEFGKELHCHVLKFGFDSSVFVQN------ALISTYCLCGEVDMARGIF 173
LL+ + +E G+++H V S ++N +I+ Y +CG D +R +F
Sbjct: 89 LLLQASGKRKDIEMGRKIHQLV-----SGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVF 143
Query: 174 DVSYKDDVVTWNAMFSGYKRVKQFDETRKLFGEM-ERKGVLPTSVTIVLVLSACAKLKDL 232
D ++ WNA+ S Y R + +DE + F EM +LP T V+ ACA + D+
Sbjct: 144 DALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDV 203
Query: 233 DVGKRAHRYVKECKIVPNLILENALTDMYAACGEMGFALEIFGNIKNKDVISWTAIVTGY 292
+G H V + +V ++ + NAL Y G + AL++F + ++++SW +++ +
Sbjct: 204 GIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVF 263
Query: 293 INRGQVDMARQYFDQMPERDYVLWTAMIDGYLRVNRFREALTLFREMQTSNIRPDEFTIV 352
+ G E ++L M++ E PD T+V
Sbjct: 264 SDNG-----------FSEESFLLLGEMME----------------ENGDGAFMPDVATLV 296
Query: 353 SILTACANLGALELGEWVKTYIDKNKVKNDIFVGNALIDMYCKCGDVEKAQRVFREMLRK 412
++L CA + LG+ V + K ++ ++ + NAL+DMY KCG + AQ +F+ K
Sbjct: 297 TVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNK 356
Query: 413 DKFTWTAMIVGLAINGHGDKSLDMFSQMLRAS--IIPDEVTYVGVLSACTHTGMVDEGRE 470
+ +W M+ G + G + D+ QML + DEVT + + C H + +E
Sbjct: 357 NVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKE 416
Query: 471 YFADMTIQHGIEPNEAHYGCMVDLLGRAGHLNEALEVIKNMPMKP-NSIVWGALLGACRV 529
+++ NE V + G L+ A V + K NS W AL+G
Sbjct: 417 LHC-YSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNS--WNALIGGHAQ 473
Query: 530 HRDAEMAEMAAKQ--ILELDPDNEAVYVLLCNIYAACNRWDNFR 571
D ++ A Q I L PD+ V C++ +AC++ + R
Sbjct: 474 SNDPRLSLDAHLQMKISGLLPDSFTV----CSLLSACSKLKSLR 513
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.138 0.422
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 265,886,293
Number of Sequences: 539616
Number of extensions: 11240765
Number of successful extensions: 35795
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 394
Number of HSP's successfully gapped in prelim test: 60
Number of HSP's that attempted gapping in prelim test: 25355
Number of HSP's gapped (non-prelim): 2255
length of query: 720
length of database: 191,569,459
effective HSP length: 125
effective length of query: 595
effective length of database: 124,117,459
effective search space: 73849888105
effective search space used: 73849888105
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 65 (29.6 bits)